BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (581 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae... 886 0.0 UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=... 695 0.0 UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=P... 671 0.0 UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PR... 620 e-176 UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii... 570 e-161 UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID... 558 e-157 UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3... 556 e-157 UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO 555 e-156 UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia ... 528 e-148 UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BN... 518 e-145 UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1... 515 e-144 UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus Rep... 501 e-140 UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium... 501 e-140 UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0... 501 e-140 UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q... 499 e-139 UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7... 493 e-137 UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK 492 e-137 UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS 490 e-137 UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=... 482 e-134 UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC22... 480 e-134 UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q... 478 e-133 UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis ... 476 e-132 UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL... 474 e-132 UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A... 474 e-132 UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 1... 468 e-130 UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS 463 e-129 UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS 455 e-126 UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens ... 453 e-126 UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN 451 e-125 UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 R... 450 e-125 UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y... 443 e-123 UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J4... 441 e-122 UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3... 440 e-122 UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB 434 e-120 UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6W... 434 e-120 UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bac... 432 e-119 UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC 430 e-119 UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P... 425 e-117 UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV 416 e-114 UniRef50_Q058D3 DNA primase n=1 Tax=Buchnera aphidicola str. Cc ... 410 e-113 UniRef50_B5JTS5 DNA primase n=1 Tax=gamma proteobacterium HTCC50... 407 e-112 UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix ... 405 e-111 UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7... 397 e-109 UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 Re... 397 e-109 UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanu... 394 e-108 UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA 393 e-108 UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47... 392 e-107 UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA... 390 e-107 UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_... 386 e-105 UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius... 381 e-104 UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7... 380 e-103 UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 Rep... 373 e-101 UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID... 368 e-100 UniRef50_A5CX96 DNA primase n=2 Tax=sulfur-oxidizing symbionts R... 363 7e-99 UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8... 363 1e-98 UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 Re... 361 5e-98 UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9I... 356 1e-96 UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxida... 353 1e-95 UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella che... 343 8e-93 UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H... 341 5e-92 UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QC... 337 6e-91 UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WE... 334 6e-90 UniRef50_Q6F8J4 DNA primase n=16 Tax=Acinetobacter RepID=Q6F8J4_... 333 7e-90 UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 331 5e-89 UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans P... 329 2e-88 UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 328 5e-88 UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199... 325 4e-87 UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATC... 324 5e-87 UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC... 322 2e-86 UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID... 320 7e-86 UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 319 1e-85 UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans ... 319 2e-85 UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQ... 317 5e-85 UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q... 315 2e-84 UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS170... 314 6e-84 UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN 313 2e-83 UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC21... 312 3e-83 UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9... 312 3e-83 UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT 310 8e-83 UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans... 305 3e-81 UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AH... 305 3e-81 UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 10... 304 6e-81 UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum Rep... 304 6e-81 UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR... 303 9e-81 UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI... 303 1e-80 UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID... 302 2e-80 UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 ... 302 2e-80 UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5... 300 8e-80 UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense... 299 2e-79 UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1... 298 3e-79 UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK 298 5e-79 UniRef50_A4JW69 DNA primase n=1 Tax=Burkholderia vietnamiensis G... 297 6e-79 UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB 296 2e-78 UniRef50_Q1GEP2 DNA primase n=17 Tax=Rhodobacterales RepID=Q1GEP... 295 3e-78 UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM... 294 6e-78 UniRef50_B8H372 DNA primase n=8 Tax=Caulobacteraceae RepID=B8H37... 294 8e-78 UniRef50_Q0AMR5 DNA primase n=2 Tax=Hyphomonadaceae RepID=Q0AMR5... 293 1e-77 UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PR... 293 1e-77 UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168... 292 3e-77 UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6T... 291 7e-77 UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivora... 290 1e-76 UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rh... 289 2e-76 UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF 289 2e-76 UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK 288 3e-76 UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans D... 288 4e-76 UniRef50_B9R233 DNA primase catalytic core, N-terminal domain fa... 288 4e-76 UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315... 287 6e-76 UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd... 287 7e-76 UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC ... 287 7e-76 UniRef50_Q2GAN5 DNA primase n=1 Tax=Novosphingobium aromaticivor... 287 8e-76 UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15... 287 9e-76 UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM 286 1e-75 UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 1261... 286 2e-75 UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaer... 286 2e-75 UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG... 285 2e-75 UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_S... 285 3e-75 UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20... 285 3e-75 UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_T... 285 3e-75 UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO 285 5e-75 UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB... 283 9e-75 UniRef50_C7RD99 DNA primase n=3 Tax=Anaerococcus RepID=C7RD99_ANAPD 283 9e-75 UniRef50_A4JV82 DNA primase n=1 Tax=Burkholderia vietnamiensis G... 283 2e-74 UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asia... 282 3e-74 UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_B... 280 1e-73 UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DS... 280 1e-73 UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 279 2e-73 UniRef50_A5FWU8 DNA primase n=1 Tax=Acidiphilium cryptum JF-5 Re... 279 2e-73 UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34... 279 2e-73 UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H... 278 3e-73 UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM ... 278 3e-73 UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K... 278 4e-73 UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_... 278 4e-73 UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1... 278 5e-73 UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU 276 2e-72 UniRef50_C3XNR6 DNA primase n=1 Tax=Helicobacter winghamensis AT... 276 2e-72 UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_E... 276 2e-72 UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteri... 275 3e-72 UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PR... 275 3e-72 UniRef50_D0RRQ9 DNA primase n=1 Tax=alpha proteobacterium HIMB11... 275 4e-72 UniRef50_D0SWX0 DNA primase n=2 Tax=Acinetobacter RepID=D0SWX0_A... 275 5e-72 UniRef50_B1ZCZ4 DNA primase n=1 Tax=Methylobacterium populi BJ00... 274 6e-72 UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 1... 274 8e-72 UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum... 273 9e-72 UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldar... 273 1e-71 UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_... 273 1e-71 UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5... 273 1e-71 UniRef50_Q6AQ52 Related to DNA primase (DnaG) n=1 Tax=Desulfotal... 273 1e-71 UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei19... 273 2e-71 UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT... 272 3e-71 UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DS... 272 3e-71 UniRef50_A7C0U9 Truncated DNA primase n=1 Tax=Beggiatoa sp. PS R... 271 4e-71 UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD 271 5e-71 UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans... 271 5e-71 UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 ... 271 5e-71 UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 271 5e-71 UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bactero... 271 6e-71 UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR... 271 7e-71 UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 271 8e-71 UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-... 270 1e-70 UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_... 270 1e-70 UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowst... 270 1e-70 UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 270 2e-70 UniRef50_A5CDZ6 DNA primase n=2 Tax=Orientia tsutsugamushi RepID... 270 2e-70 UniRef50_C7GZY8 DNA primase n=1 Tax=Eubacterium saphenum ATCC 49... 269 2e-70 UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 ... 269 2e-70 UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 269 2e-70 UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC ... 269 3e-70 UniRef50_B6WAP6 Putative uncharacterized protein n=1 Tax=Anaeroc... 268 3e-70 UniRef50_Q3AEW9 DNA primase n=1 Tax=Carboxydothermus hydrogenofo... 268 4e-70 UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E... 268 4e-70 UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleoca... 268 4e-70 UniRef50_Q2W753 DNA primase n=1 Tax=Magnetospirillum magneticum ... 268 5e-70 UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 512... 268 5e-70 UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus ... 268 5e-70 UniRef50_B2J1X7 DNA primase n=6 Tax=Cyanobacteria RepID=B2J1X7_N... 268 5e-70 UniRef50_P50070 DNA primase n=3 Tax=Cystobacterineae RepID=PRIM_... 268 6e-70 UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DS... 267 7e-70 UniRef50_B1C761 Putative uncharacterized protein n=1 Tax=Anaerof... 267 7e-70 UniRef50_A4XHW3 DNA primase n=1 Tax=Caldicellulosiruptor sacchar... 267 8e-70 UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA 267 1e-69 UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4... 267 1e-69 UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum... 266 2e-69 UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 Re... 266 2e-69 UniRef50_C7HUH2 DNA primase n=1 Tax=Anaerococcus vaginalis ATCC ... 266 2e-69 UniRef50_C0QRZ4 DNA primase n=1 Tax=Persephonella marina EX-H1 R... 266 2e-69 UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens... 266 2e-69 UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM... 265 3e-69 UniRef50_A6Q1G7 DNA primase DnaG n=7 Tax=Epsilonproteobacteria R... 265 3e-69 UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9... 265 3e-69 UniRef50_C6XRH9 DNA primase n=1 Tax=Hirschia baltica ATCC 49814 ... 265 4e-69 UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collins... 265 5e-69 UniRef50_C5B5M4 DNA primase n=1 Tax=Methylobacterium extorquens ... 265 5e-69 UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9... 264 6e-69 UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 425... 264 7e-69 UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID... 264 9e-69 UniRef50_B6BSC8 DNA primase n=3 Tax=Candidatus Pelagibacter RepI... 263 9e-69 UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus ... 263 1e-68 UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9X... 263 1e-68 UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 ... 263 2e-68 UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostri... 263 2e-68 UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC... 263 2e-68 UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E... 262 2e-68 UniRef50_A6QCI7 DNA primase DnaG n=3 Tax=Epsilonproteobacteria R... 262 3e-68 UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp.... 261 4e-68 UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH 261 4e-68 UniRef50_UPI0001C31A92 DNA primase n=1 Tax=Conexibacter woesei D... 261 4e-68 UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_... 261 4e-68 UniRef50_B2V7P8 DNA primase n=3 Tax=Aquificales RepID=B2V7P8_SULSY 261 6e-68 UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitat... 261 6e-68 UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonel... 260 8e-68 UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 Re... 260 1e-67 UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC... 260 1e-67 UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A... 259 2e-67 UniRef50_Q1RKH8 DNA primase n=15 Tax=Rickettsia RepID=PRIM_RICBR 259 2e-67 UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodism... 259 3e-67 UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii C... 258 3e-67 UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_C... 258 3e-67 UniRef50_Q1MR04 DNA primase (Bacterial type) n=2 Tax=Desulfovibr... 258 4e-67 UniRef50_C7PKU5 DNA primase n=1 Tax=Chitinophaga pinensis DSM 25... 258 5e-67 UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistip... 258 5e-67 UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE 258 6e-67 UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum D... 258 6e-67 UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO 258 6e-67 UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin4... 258 6e-67 UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_L... 257 1e-66 UniRef50_C8PVB6 DNA primase n=1 Tax=Enhydrobacter aerosaccus SK6... 256 1e-66 UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_... 256 1e-66 UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp.... 256 1e-66 UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenen... 256 1e-66 UniRef50_D1B4H3 DNA primase n=2 Tax=Campylobacterales RepID=D1B4... 256 1e-66 UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candida... 256 1e-66 UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostri... 256 2e-66 UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spin... 255 3e-66 UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM... 255 3e-66 UniRef50_A3VV42 DNA primase n=1 Tax=Parvularcula bermudensis HTC... 255 3e-66 UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DS... 255 3e-66 UniRef50_B8IZR5 DNA primase n=1 Tax=Desulfovibrio desulfuricans ... 255 3e-66 UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903... 254 6e-66 UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE 254 6e-66 UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coproco... 254 7e-66 UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_... 253 2e-65 UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium AT... 253 2e-65 UniRef50_C1XJV8 DNA primase n=1 Tax=Meiothermus ruber DSM 1279 R... 252 3e-65 UniRef50_C3RLQ3 DNA primase n=3 Tax=Bacteria RepID=C3RLQ3_9MOLU 252 3e-65 UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis Rep... 252 4e-65 UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6V... 251 4e-65 UniRef50_D1B615 DNA primase n=1 Tax=Thermanaerovibrio acidaminov... 251 5e-65 UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855... 251 6e-65 UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE 251 6e-65 UniRef50_C0ATB4 Putative uncharacterized protein n=1 Tax=Proteus... 250 1e-64 >UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae RepID=C5BH75_EDWI9 Length = 599 Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/581 (72%), Positives = 492/581 (84%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIPRVFINDLLARTDIV+L+DARVKLKKQGKN+HACCPFH+EKTPSFTVN +KQFYH Sbjct: 18 MAGRIPRVFINDLLARTDIVELVDARVKLKKQGKNYHACCPFHSEKTPSFTVNADKQFYH 77 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAIDFLMNYD+LEFVE++EELA M LEVP+E+GSGPSQ+ERHQRQ LYQLM Sbjct: 78 CFGCGAHGNAIDFLMNYDRLEFVESIEELATMAGLEVPYESGSGPSQMERHQRQNLYQLM 137 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 DGL +YQQSL+QP AT A+QYL RG+S ++ FAIG+AP GWDN LKRFG + R Sbjct: 138 DGLCGYYQQSLRQPGATQAQQYLTGRGMSQAIMDSFAIGYAPQGWDNALKRFGRDAGGRT 197 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 +L DAGMLV N+ GRSYDRFR+R+M PIRDKRGRVI FGGRVLGN TPKYLNSPET+IFH Sbjct: 198 ALNDAGMLVNNENGRSYDRFRDRIMIPIRDKRGRVIAFGGRVLGNGTPKYLNSPETEIFH 257 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGRQL+GLYEA Q A+P RLLVVEGYMDV+ALAQYG+NYAVASLGTSTTA+HIQLLFR Sbjct: 258 KGRQLFGLYEALQHAAQPERLLVVEGYMDVIALAQYGVNYAVASLGTSTTAEHIQLLFRH 317 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+CCYDGD AGR+AAWRALETALPY++DGRQL+FMFLP+GEDPDTL+RKEG EAFE Sbjct: 318 TDSVVCCYDGDNAGREAAWRALETALPYLSDGRQLKFMFLPEGEDPDTLIRKEGAEAFER 377 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 RM A PLS FLF+SL+PQVDLSTPDGR +LS LALPLI QVPGETLR+YLRQ LG KLG Sbjct: 378 RMNDAHPLSTFLFDSLLPQVDLSTPDGRTKLSALALPLIGQVPGETLRLYLRQSLGQKLG 437 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 ILDDSQLE+L+P+ +E+ + P+LK TTMRILI LLVQNP LA VP L+ L ++ LP Sbjct: 438 ILDDSQLEKLLPRRSEAVKNYQPPRLKPTTMRILIALLVQNPALAAEVPTLDGLHQHPLP 497 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 GL LF ELV TCL+QPGLTTGQLLE YR A+ LE L+ W+ + + + +TF D+L Sbjct: 498 GLPLFIELVETCLAQPGLTTGQLLELYRDNKYASQLETLATWNHMIIEPMVLETFVDTLG 557 Query: 541 HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++D++LE R E+LIAR RT GL+ ER E+ +LN+ LAKK Sbjct: 558 SLYDAVLEQRLEQLIARARTDGLTPAEREEVRSLNEALAKK 598 >UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=PRIM_PASMU Length = 582 Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/576 (57%), Positives = 427/576 (74%), Gaps = 4/576 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLLA+TDIV+L+++RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRTFIDDLLAKTDIVELVNSRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSG--PSQIERHQRQTLYQ 118 CFGCGAHGNAI FLM YDKLEFVE +EELA M LE+P E QI ++ LY+ Sbjct: 61 CFGCGAHGNAISFLMEYDKLEFVEAIEELAGMLGLEIPRENKPHFHGKQINLQTKRNLYE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 LM + FYQQ L Q + A+ YL++RGLS EVI+RF IGF P +D VL+RFG E+ Sbjct: 121 LMQEIAQFYQQQLAQHIP--AQSYLQQRGLSPEVISRFQIGFVPNSFDAVLQRFGQQKED 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +Q L D GML ++QG+ YDRFR R+MFPIRD+RG+ I FGGRVLG++ PKYLNSPE+ Sbjct: 179 QQKLFDLGMLSRSEQGKIYDRFRHRIMFPIRDRRGKTIAFGGRVLGDEKPKYLNSPESAT 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HKG +LYGLYEA Q N P LLVVEGYMDVVALAQ+G++YAVASLGT+TTA+ IQLLF Sbjct: 239 YHKGNELYGLYEALQANESPEMLLVVEGYMDVVALAQFGVDYAVASLGTATTAEQIQLLF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R+T ICCYDGDRAGR+AAWRA E ALPY+ DGRQL+F+FLPDGEDPD+ +R+ GK +F Sbjct: 299 RSTEQAICCYDGDRAGREAAWRAFENALPYLEDGRQLKFVFLPDGEDPDSFIRQHGKASF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E M++A+ LS FLF SL PQVD S+ +G+ +L+ LA+PLI ++PG+ LR+ LR L K Sbjct: 359 EQYMQKALSLSEFLFTSLAPQVDFSSKEGKTKLAALAVPLIKKIPGDMLRLSLRNTLAQK 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 LGILD +QLE L+P +E ++ +KRT MR+LIGLL+QNPELA LVP L L Sbjct: 419 LGILDQAQLESLIPSYSEMKITASPQPVKRTPMRVLIGLLLQNPELAQLVPDLSPLRTLN 478 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 PGL L +L C + G+TTGQ+LE++R T ++ LE L+ W+ + + E+TF + Sbjct: 479 EPGLDLLEKLTALCQEKVGITTGQILEYWRDTEHSKALEILASWNHLVEDTQIEETFKST 538 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 L +++ L+E + LIA++R+ GL+ ER +L L Sbjct: 539 LRYLYFQLIEHEIDLLIAKDRSEGLNMNERKKLTQL 574 >UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=PRIM_HAEIN Length = 593 Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/580 (56%), Positives = 416/580 (71%), Gaps = 8/580 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLL ++DIVD+I+ RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRPFIDDLLTKSDIVDVINTRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA---GSGPSQIERHQRQTLY 117 CFGCGAHGNAI FLM+YDKLEF+E +EELAAM LE+P+E SG Q ++ LY Sbjct: 61 CFGCGAHGNAISFLMDYDKLEFIEAIEELAAMAGLEIPYEKRVNHSGKPQANYQTKRNLY 120 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +LM + TFYQ L P+ T A++YL++RGLS E+I RF IGF P D VL++FG N E Sbjct: 121 ELMQEIATFYQNQL--PLNTQAQEYLQQRGLSPEIIERFQIGFVPNAMDTVLRKFGVNRE 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 +Q LI+ GML ND+G YD+FR R+MFPIRDKRGR + FGGRVL ++ PKYLNSPET Sbjct: 179 EQQKLIELGMLSRNDRGNIYDKFRNRIMFPIRDKRGRTVAFGGRVLTDEKPKYLNSPETI 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +HKG++LYGLYEA Q N EP +LLVVEGYMDVVALAQ+G++YAVASLGTSTT++ IQL+ Sbjct: 239 TYHKGKELYGLYEALQTNDEPKQLLVVEGYMDVVALAQFGVDYAVASLGTSTTSEQIQLI 298 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R+T V+CCYDGDRAGRDAAWRALE ALPY+ DGRQL+F+FLPDGE+PDT +R+ GKE Sbjct: 299 LRSTEQVVCCYDGDRAGRDAAWRALENALPYLEDGRQLKFIFLPDGEEPDTYIRQYGKEK 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +E A LS F+F L PQVD ST +GR +L LA PLI Q+PGE LR+ LR L Sbjct: 359 FEEYIESAQSLSEFMFAHLSPQVDFSTKEGRGKLVALAAPLIHQIPGEMLRLSLRNMLAQ 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVP---QLKRTTMRILIGLLVQNPELATLVPPLENL 474 KLGI D +QLE L+PK E ++ ++K+T MR++I LL+QNPEL + Sbjct: 419 KLGIFDQTQLENLIPKKLEQANTQQKVTHNKIKKTPMRMVISLLMQNPELVKRMSESGVQ 478 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 G + +L C + G+TTGQ+LE++R T+ + LE L+ WD + D++ Sbjct: 479 ALRAEAGFEILEKLTALCRQREGITTGQILEYFRNTSYSNPLEILATWDHLLDESDIINA 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 F+ + + +E E LIA+ERT GL+NEE+ L L Sbjct: 539 FSQNYRRLNIQAIERDIEMLIAKERTEGLTNEEKTVLVHL 578 >UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PRIM_BUCAP Length = 579 Score = 620 bits (1598), Expect = e-176, Method: Compositional matrix adjust. Identities = 284/582 (48%), Positives = 404/582 (69%), Gaps = 4/582 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G+IP+ FIN+LL RT+IV+LI+ R+KLKK GKN+ CPFHN+KTPSFTV+ EKQFY+ Sbjct: 1 MSGKIPKYFINELLFRTNIVELIETRIKLKKNGKNYQTHCPFHNDKTPSFTVSYEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAIDFL+NYD L FVE++EELA +H++E+PF+ + ++Q LY LM Sbjct: 61 CFGCSAHGNAIDFLINYDNLNFVESIEELATIHSIEIPFDKKGTIEKKIYLKKQKLYFLM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D ++ YQ+++ SA +YL +RG++ +I F IGF+ WD K+F + + Sbjct: 121 DKMSKLYQKNI--IFTNSANKYLTERGINKNMIDFFCIGFSSNKWDLFSKQFNIKKDFEK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIF 239 L+ ++ TN G YD F+ R++FPI D+ GR+I FGGR + N+ PKYLNS E DIF Sbjct: 179 DLLHYKIISTNKNGYIYDTFQGRIVFPIHDQHGRIISFGGRSITNNILPKYLNSHENDIF 238 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+Q+YGLY+ ++ +++P LLVVEGY+DV+ L QY I Y V+SLGTS T +HIQ+LFR Sbjct: 239 HKGKQIYGLYQVKKKHSKPKYLLVVEGYIDVIMLTQYNIEYVVSSLGTSITKEHIQILFR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN VI CYDGD AGR+A+WR L+ ALPY++D + ++F+ LP+ EDPDT+++KEG++ F+ Sbjct: 299 HTNTVIYCYDGDDAGRNASWRTLKIALPYISDKKNIKFIILPNNEDPDTIIKKEGQKKFQ 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R++ A+ +S F F +++ VDLS+ D + LS ALPLI+ + +T+RIYLRQ L + Sbjct: 359 LRIDNALTMSKFFFKNILKNVDLSSDDDKFHLSVRALPLINCISSDTIRIYLRQILARTI 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 GI+DD Q E+ + + S Q+K T MR LIGLL+QNP LA LVP + + K+ Sbjct: 419 GIVDDYQFEKFLYEKERKKKSLQF-QIKHTPMRTLIGLLIQNPNLARLVPSTKKFENEKI 477 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 GL +F E++ TC P TGQLLE YR + L+ LS WD + K + F D L Sbjct: 478 QGLPIFLEILKTCSDNPNFNTGQLLEFYRYSKIINILKILSKWDHMIIKEKIQNMFLDLL 537 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + +LE RQE+LIA+ER GL+ +E+ E+W++N++L+KK Sbjct: 538 KNTYSKILEKRQEKLIAKERIQGLTIDEKKEIWSINKKLSKK 579 >UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC827 Length = 592 Score = 570 bits (1469), Expect = e-161, Method: Compositional matrix adjust. Identities = 289/591 (48%), Positives = 406/591 (68%), Gaps = 11/591 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IPR FI+DLL+RTD+V+++D+RVKLKK GKN+ ACCPFHNEK+PSFTV+ +KQFYH Sbjct: 1 MAGKIPRDFIDDLLSRTDVVEVVDSRVKLKKAGKNYQACCPFHNEKSPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQ 118 CFGCGAHGNAI F+M +D+LEFVE +EELA H LEVP E GS P S+ ++ Q+Q Y Sbjct: 61 CFGCGAHGNAISFIMEFDRLEFVEAIEELARYHGLEVPREKGSRPAMSEEKKQQQQDDYA 120 Query: 119 LMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +M+ + F+Q L+Q + A YL+ RGLS +++ ++ IG+AP WD +L FG + + Sbjct: 121 VMEQVARFFQHQLRQNGNSKKAIDYLKNRGLSGDIVKQWEIGYAPDSWDALLNTFGKDQQ 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + L+D ++ NDQGR+YD FR+R+MFPIRDKRGRV+GFGGRVL + PKYLNSPET Sbjct: 181 RIKQLVDLKLVNKNDQGRTYDFFRDRIMFPIRDKRGRVVGFGGRVLDDGGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IFHKG +L+G Y A+Q N + +++VEGYMDVVAL+Q+ IN A A+LGT+TT +HIQ+L Sbjct: 241 IFHKGSELFGFYSARQKNRSLDTVVIVEGYMDVVALSQFDINIATAALGTATTPEHIQML 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 RAT++++CCYDGDRAGR+AAWRALE ALP + DG ++ F+FLPDGEDPDT+VR+ GK+A Sbjct: 301 VRATSHIVCCYDGDRAGREAAWRALENALPALKDGVRISFLFLPDGEDPDTMVRQVGKDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F ++ AMPLS F F +L+ ++ TP+G+ L A+PLI G+ + L +EL Sbjct: 361 FMEMLDDAMPLSRFFFENLLKTHNVGTPEGKIALKKAAMPLIESTLGDDQKQMLLEELAK 420 Query: 418 KLGILDDSQLERLMPKA------AESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP- 470 G D +L++ + KA A S V + K + +R+LI LL+ PELATL Sbjct: 421 HTGEFDRFKLQQDITKANQGSKQAYSPNRNQVNKPKLSPLRMLIRLLLDKPELATLCEDV 480 Query: 471 -LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 ++ + G+ L R++ + C+S P T QL+E++R +++T+ KL + + + Sbjct: 481 QIDIFAGSNAAGMDLLRDVHSYCVSHPQAKTAQLVENFRDHPHSSTIAKLLLQEHLVKDE 540 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 AE+ + DS + D + R E LI+R R L+ E+ EL L +E K Sbjct: 541 DAERVYNDSFARLLDGHFDSRIETLISRSRVQPLTQAEKQELNLLMRERQK 591 >UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID=Q7VQR1_BLOFL Length = 588 Score = 558 bits (1439), Expect = e-157, Method: Compositional matrix adjust. Identities = 266/586 (45%), Positives = 390/586 (66%), Gaps = 8/586 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I++L++RT+IV +I+ R+ LKKQG NF ACCPFH EKTPSFTVN +K+FY+ Sbjct: 1 MINRIPQALIDELISRTNIVHIINQRIPLKKQGSNFIACCPFHVEKTPSFTVNLKKKFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG+HGN I+FLM++D+L F+E++++L+ +H + + + ++ + +Y M Sbjct: 61 CFSCGSHGNIINFLMHHDQLTFIESIQQLSILHGISI--KHFLYKTKNNNYHGDIIYTFM 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +YQ +L+ + A +YL+ RGL+ I F IGFAP GW+N+L + N + Sbjct: 119 RDICNYYQNNLKHKKYSYAYKYLKNRGLTDSSIIDFKIGFAPMGWNNILTNINLSSYNHK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDI 238 + +GM + Q + YDRFR R+MFP+ +K G++I FGGR++ N+ PKYLNSP+T I Sbjct: 179 LIHQSGMWIKYHQNKKYDRFRNRIMFPMHNKLGKIIAFGGRLIQNNNTEPKYLNSPDTYI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + LYG YE +L+VEGY+DV+ L Q+G+NYAVASLGTS T +HIQL++ Sbjct: 239 FKKNQYLYGFYEICTKYKNIPYILLVEGYIDVIILTQFGVNYAVASLGTSITINHIQLIY 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 TN +ICCYDGD AG+ AAWR L LPY+ D R++ FMFLP EDPDTL+RK GK+ F Sbjct: 299 SVTNQMICCYDGDSAGKKAAWRTLNIILPYLHDHREICFMFLPVKEDPDTLIRKIGKDNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ +A LS F+F++L+ +V + T +GR +LS L LP+I+++PG+ L++ L Q+L NK Sbjct: 359 LKQISKAQSLSNFIFDTLLHKVKIQTLEGRVKLSHLILPMINKIPGQILKLCLLQQLSNK 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQ-LKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 +GILD+++L +L+ + + + S + ILIGLL+QNP+LA LVP ++ L E Sbjct: 419 IGILDENKLNQLLIQHSPTLTSNVQNNDITYNIKHILIGLLIQNPKLAKLVPTIKGLKEC 478 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHY--RGTNNAAT-LEKLSMWDDIADKNIAEQT 534 K + F +LV C S P LTT QL+ +Y NN T + +L+ W+ + ++ T Sbjct: 479 KDNIIIEFVKLVKLCKSYPYLTTEQLIHYYHQHDENNCFTNIIRLAHWNHMITDDMITVT 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 F D+L ++D +LE RQ LI+R+RT L EER ELW LNQ L+K Sbjct: 539 FIDTLTKLYDLILEHRQNILISRDRTSTLKIEERQELWLLNQTLSK 584 >UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3QBM0_SHELP Length = 601 Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust. Identities = 291/575 (50%), Positives = 390/575 (67%), Gaps = 15/575 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IPR FIN+L+ARTDIVDLIDA+V LKK GKN ACCPFH+EK+PSFTV+ +KQFYHCFGC Sbjct: 29 IPREFINELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCFGC 88 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHGNAIDF+M YD+L+FV+ +EELA LEVP E G+G + E R LYQLM+ + Sbjct: 89 GAHGNAIDFVMEYDRLDFVDAIEELAGRLGLEVPREQGTGKRRDEGLSRD-LYQLMEEAS 147 Query: 125 TFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++Q L+Q YL RGLS EVI F IGFAP GWD +L R+ N + + L+ Sbjct: 148 RYFQSQLKQHTDKQKVLDYLAHRGLSDEVIEHFNIGFAPDGWDGLLGRYRQNQDAQDKLL 207 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AGM++ ND G+ YDRFR+R+MFPIRD+RGRVIGFGGRVLG+ TPKYLNSPET IFHKG Sbjct: 208 TAGMVIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKGY 267 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGLYE +Q + +P+++L+VEGYMDVVAL Q+G++YAVASLGTSTTAD QLL R+ Sbjct: 268 ELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTTADQFQLLLRSAKE 327 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 VICCYDGD+AG +AAWRALETALP + G Q++FMFLP GEDPD+LVR+ GK AFE + Sbjct: 328 VICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLVRQIGKPAFEQLIA 387 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 +A L FLF++L + + L+ A+ LI +V L+ L + L KLG+ Sbjct: 388 EAKLLPEFLFDTLASRYGTD----KGTLAKQAMSLIEKVQDTVLQSLLLENLAYKLGMNS 443 Query: 424 DSQLERLMPKA---AESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 +L+R + A + + + T +R+ I LLVQ+P L +P L K+ Sbjct: 444 AEELQRKLGFKRIDANKPLQNKALKGRGTPLRLAIALLVQHPHLGNNLPVQPALKHIKMA 503 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD-DIADKNIAEQTFTDSL 539 G+ L L++ ++ + + QLLE +RG + TL+KL+ W+ +AD+N+ +Q F +L Sbjct: 504 GIDLLSLLLDRTRAEK-VNSAQLLEQFRGDDQLDTLKKLAQWEHQVADENL-QQEFKKAL 561 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + +E R +EL ++ + EER++L L Sbjct: 562 IWLNNQYIEQRYQELSLKQHH---TKEERMQLKKL 593 >UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO Length = 581 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 284/583 (48%), Positives = 381/583 (65%), Gaps = 7/583 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIV+++D+RV LKK G+N ACCPFHNEKTPSFTV+ +KQFYH Sbjct: 1 MAGLIPKSFIHDLLERADIVEIVDSRVPLKKAGRNHQACCPFHNEKTPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL--YQ 118 CFGCG HGNAIDFLM +D L F + VEELA + +EVP E P ++ Q+Q + Sbjct: 61 CFGCGEHGNAIDFLMEFDGLNFPDAVEELAGIMGVEVPREQPENPQLAQKKQQQMQDDSE 120 Query: 119 LMDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 LM F+Q L+ + YL+ RGLS E + RF IG+AP WD +L FG + Sbjct: 121 LMSKTARFFQHQLKHHENSNRVIDYLKGRGLSGETVKRFQIGYAPDAWDGLLSTFGSSAP 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 RQ L++ ++ N++GR YD FR+RVMFPI D+RGRV+GFGGR++ D PKYLNSPET Sbjct: 181 QRQQLLELKLINRNEKGRHYDFFRDRVMFPIHDRRGRVVGFGGRIIDGDGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG +LYG + QQ +P ++ +VEGYMDVVAL++ GI+YAVASLGT+TT++ +Q L Sbjct: 241 LFHKGSELYGYWHMQQAVRKPEQVCIVEGYMDVVALSEAGIHYAVASLGTATTSEQLQRL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR + ++CCYDGDRAGRDAAWRALE ALP + DG + F+FLP+GEDPD++VR+ G EA Sbjct: 301 FRTSGRIVCCYDGDRAGRDAAWRALENALPLLRDGLDMAFLFLPEGEDPDSVVREHGAEA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +++A P + + F L +D+S+ GR++L +A PLI +V E R L Q L Sbjct: 361 FERELKKATPFTEYFFEHLQADIDVSSDAGRSQLLNIAKPLIEKVASEYYRDTLMQRLAE 420 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 KL + SQLER K SRP +K T +R I LL+Q P+LA VP E L E Sbjct: 421 KLR-RETSQLERQFEKPQRQ--SRPKESVKMTPLRKAIALLLQYPQLAQSVPVREELREL 477 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ G+ L L C ++ +TT Q+LE +R T L+KL++W D++ EQ F D Sbjct: 478 QVSGIDLLIALHKQC-AERQMTTAQVLEGWRDTEYYQPLQKLALWQHQLDEDNVEQEFND 536 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 ++ D E R L+ +E+ L+ ER E TL Q L+K Sbjct: 537 IFIYLIDQYFEQRANALLKKEQEGALTRVERQEYQTLIQYLSK 579 >UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D285_WIGBR Length = 582 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 254/589 (43%), Positives = 378/589 (64%), Gaps = 15/589 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M I +FIN LL +I++LI + + LKK GKN+ A CPFH EKTPSF+V+ EKQF+H Sbjct: 1 MNAYISNLFINRLLENINIIELISSIINLKKSGKNYFALCPFHQEKTPSFSVSYEKQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQI---ERHQRQTLY 117 CFGCG HGNAIDFLMNY+ L F+E++EEL+ + F+ I E +R +Y Sbjct: 61 CFGCGIHGNAIDFLMNYNNLTFIESIEELSNIAGF--AFKKAQSKKIINNEELKKRSDIY 118 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +LM+ ++ Y++ L + A YL RGL+ + I F+IGF+ N+L + + Sbjct: 119 KLMNQVSMIYKKILNSKIFIEANDYLNNRGLNIDSIEEFSIGFSSINI-NILNYLKQSLQ 177 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 N L +G+ + N++ + + F+ R+M P++DK G VI FGGR + N PKYLNS ET Sbjct: 178 NFYLLKSSGIFLINEKKKLSNIFKNRIMIPMKDKYGNVIAFGGRSINNFFPKYLNSKETL 237 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF K LYG+YE ++ + ++L+VEGY DV++L+QYGI Y+VASLG TT I+++ Sbjct: 238 IFKKSNYLYGIYEIKKRKIKILKILLVEGYFDVISLSQYGIYYSVASLGC-TTPFQIKII 296 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR TN +ICCYDGD AGR +AW+ L +L Y+ DGR++ F+FLP+ EDPD+L+RK GK++ Sbjct: 297 FRLTNKIICCYDGDSAGRRSAWKTLINSLSYLEDGREIFFIFLPNNEDPDSLIRKIGKKS 356 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +E A P+S+FLF++L+ + +L DG+ + L LP+I ++PG+ LR+Y+R+E+G Sbjct: 357 FEILIEDAKPMSSFLFDTLIKKSNLYHLDGKVKFIKLILPIIKKIPGKNLRLYIRKEIGY 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVP-----PLE 472 K+GIL+D QLE+ + + K M LIGLL+QNP+L+ L+ L Sbjct: 417 KIGILEDYQLEKFLSLKEIKYKKNKQIKYKNNIMNTLIGLLIQNPKLSKLISKKNEIKLY 476 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 N+ ++P F EL+ C + + T Q+LEHYRG LE L++WD + +N+ + Sbjct: 477 NIRIKEIP---FFIELIKICKNNTNINTSQILEHYRGKKYHNHLENLAIWDHMISENLIK 533 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 Q F ++L+ ++ +L RQ LI+R R LS EE+ ELW +N++L+KK Sbjct: 534 QIFIETLSSLYKIILVSRQNILISRARIQDLSVEEKKELWCINKKLSKK 582 >UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BND8_XANC5 Length = 582 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 266/586 (45%), Positives = 375/586 (63%), Gaps = 16/586 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 RIP FI++LLARTDIV+++ RV LK+QGK + A CPFH+E++ SFTV+ KQFYHCF Sbjct: 2 ARIPDAFIDELLARTDIVEVVGGRVPLKRQGKEYSARCPFHDERSASFTVSPTKQFYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGAHG AI FLMNYD+LEF++ V+ELA +++P E Q + R+ LY +D Sbjct: 62 GCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMDIPRETQQRTPQQQDDSRE-LYSALDA 120 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+Q+ L+ + AR YL+ RG+ + ARF IG+AP G+ + G + L Sbjct: 121 ATKFFQRQLEG--SERARDYLDGRGVDADNRARFQIGYAPDGYSALKDTLGTDARRMSVL 178 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG------NDTPKYLNSPET 236 AG+ ND+G YD+FR+RVMFPI D+RGRVI FGGR++G + PKYLNSPET Sbjct: 179 ERAGLFSKNDRGHVYDKFRDRVMFPIFDRRGRVIAFGGRIMGAPADGRDPGPKYLNSPET 238 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKGR+LYGL++ +Q N + RL+VVEGYMDVV+L Q+G+ AVA+LGT+TT +H +L Sbjct: 239 ALFHKGRELYGLWQVRQANQKIERLIVVEGYMDVVSLFQFGVTQAVATLGTATTPEHAEL 298 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 LFR +V C+DGD AGR A WRALE+ LP M DGRQ F+FLPDGEDPDT+VRKEG + Sbjct: 299 LFRNAPDVYFCFDGDNAGRKAGWRALESVLPRMKDGRQAFFLFLPDGEDPDTIVRKEGAQ 358 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AF+ R++QA PLS F F+ + +++L T DG+ARL+ A PL++Q+P ++QEL Sbjct: 359 AFDQRLKQATPLSQFFFDEMSREINLHTLDGKARLAERARPLLAQIPEGAFGDLMKQELA 418 Query: 417 NKLGILDDSQLERLMPK---AAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 G+ + ++ P+ A G P KR+ +R I +L+Q P LA + + + Sbjct: 419 RLTGVGATASAQQSAPRLRLPARVG----APTQKRSLVRASIAILLQRPSLAMSLEGVHD 474 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 +LPG+ L EL++ +P ++TG LLEH+ A L+KL+ + D++ Sbjct: 475 FSGLRLPGIDLLMELLDLVRQRPEISTGALLEHFAERQELAALQKLAAQELPGDEHSWTL 534 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 D + + LL R EEL A++R GL + ++ E+ L + LA Sbjct: 535 ELHDVVAQLDKQLLRQRVEELQAKQRAQGLDDTDKYEMRELLKALA 580 >UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1DIY5_AZOVD Length = 638 Score = 515 bits (1327), Expect = e-144, Method: Compositional matrix adjust. Identities = 281/626 (44%), Positives = 388/626 (61%), Gaps = 55/626 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIV++I +RV+LKK G+N+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQGFIDDLLNRTDIVEVIGSRVQLKKTGRNYSACCPFHQEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D LEF + VEELA LEVP E GP Q + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDHLEFPQAVEELARRAGLEVPREERGGPHQPRQSADSPLYPLL 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +Y+Q+L+ P A YL+ RGLS + FA+GFAPPGWDN+LK GG+ + Sbjct: 121 ATAADYYRQALKSHPARQVAVDYLKGRGLSGVIARDFALGFAPPGWDNLLKHLGGDALQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++I+AG+L+ N + GR YDRFR+RV+FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIEAGLLIENAETGRRYDRFRDRVIFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA++ N + + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARRHNRDLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR AAWRALE LP + DGR+ RF+FLP+GEDPD+LVR EG+EAF Sbjct: 301 RLVPSVLFCFDGDQAGRKAAWRALEATLPSLQDGRRARFLFLPEGEDPDSLVRAEGREAF 360 Query: 359 EARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+E QA PL+ + F L + D T +G+A L+TLA PLI ++PG LR +RQ L Sbjct: 361 LARLEQQARPLADYFFRQLTEEADPGTLEGKAHLATLAAPLIEKIPGANLRALMRQRLAE 420 Query: 418 KLGI---------------LDDSQLERLMPKAAE----------------------SGVS 440 G+ ++D+ + P A+ SG Sbjct: 421 ITGLTGTSPNSPAASPVPRVEDAHYYQADPGYADLIEPERSAFGRTAQDKGQWKGRSGYR 480 Query: 441 R------PVPQLKRTTMRI------LIGLLVQNPELATLVPPLENLDENKLPGLGLFREL 488 + P P RT + + + L+Q+P+LA V + + P L L Sbjct: 481 KGRDDFAPRP---RTAVSVEPPNLSALRTLLQHPQLAQKVADASHFASEEDPYAQLLVAL 537 Query: 489 VNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLE 548 + P ++ QL+ + GT L L+ + + + EQ F D++N + E Sbjct: 538 LEALQKNPRSSSLQLIARWHGTEQGRLLRALAEKEWLISTDNLEQQFFDTINTLAARQRE 597 Query: 549 LRQEELIARERTHGLSNEERLELWTL 574 E+L+ + R LS EE++ L L Sbjct: 598 RGIEQLLRKARQGELSAEEKIRLRDL 623 >UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus RepID=Q602R8_METCA Length = 571 Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust. Identities = 271/580 (46%), Positives = 373/580 (64%), Gaps = 18/580 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+PR FI+DL+AR DIVDLIDARV LKK G +F A CPFH+EKTPSF+V+ EKQFYH Sbjct: 1 MAGRLPREFIDDLIARIDIVDLIDARVPLKKSGSSFLARCPFHSEKTPSFSVSREKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM+Y+ F E +E LA + +++P +A + P Q +Y ++ Sbjct: 61 CFGCGAHGNAISFLMDYEHQSFPEALETLATLAGIDLP-KAMATPGANPSASLQPVYDIL 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY Q L+ P A A+ YL KRGL+ E+ R+ +G+APPGW+++ + R Sbjct: 120 ERAAGFYIQQLRDHPDAGQAKIYLRKRGLTGEIARRYRLGYAPPGWNSLPADW-----PR 174 Query: 180 QSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 LI +G+++ ++GRS YDRFR R+MFPIRD+RGRVIGFGGR LG+DTPKYLNSPET++ Sbjct: 175 TLLIQSGLVI--EKGRSCYDRFRHRIMFPIRDRRGRVIGFGGRTLGDDTPKYLNSPETEV 232 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG++LYGL+E + P R+LVVEGY+DV+ALAQ+GIN AVA+LGTST+A+H+ LLF Sbjct: 233 FRKGKELYGLHELLESTPRPRRILVVEGYLDVIALAQHGINDAVATLGTSTSAEHVHLLF 292 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T ++ C+DGD AG AAWRALE +LP + +GR++RF+ LP GEDPD+L+RKEG+EAF Sbjct: 293 RFTREIVFCFDGDAAGHKAAWRALEASLPLLQEGREIRFIHLPAGEDPDSLIRKEGREAF 352 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E+R+ QA P S +LF +L +DL + +GRA L A L+ ++P R + Q L Sbjct: 353 ESRIGQASPFSDYLFRTLQKDLDLRSIEGRATLQKQARELLDRLPVGAFRTLMEQRLSEF 412 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLK-RTTMRILIGLLVQNPELATLVPP--LENLD 475 G+ + K+ E+ + P Q++ + R ++ LL+ P LA L+ P L Sbjct: 413 TGVAPPAPAS----KSLENRLGHPSGQVRPPSAWRNVVTLLLHRPRLAKLISPEIRARLI 468 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 EN G + R L T L T G L EH R T L + + E+ F Sbjct: 469 ENPRAGPLIARILEYTDLRDTP-TAGMLFEHLRETPEGELARNLLKPGLLTPEEGMEREF 527 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 D+L+ + L + R +LI + + L++ ER EL L Sbjct: 528 VDALDRVRALLRDERLSQLIEKSKAAQLTDSEREELRKLT 567 >UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y846_9GAMM Length = 611 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 266/574 (46%), Positives = 364/574 (63%), Gaps = 37/574 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP+ FI+DLL R DIV++ID RV LKK G+NF ACCPFH EKTPSF+VN EKQFY+ Sbjct: 1 MSGRIPQSFIDDLLDRLDIVEVIDRRVGLKKSGRNFTACCPFHEEKTPSFSVNQEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M+Y++++F +E LA LEVP EA + Q + Q++ +Y ++ Sbjct: 61 CFGCGAGGNAIGFIMDYERMDFPRAIEVLADTAGLEVPREASAFQEQPQ--QKKNIYTIL 118 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +YQQ L++ P A YL+ RGLS E+ F +G+APPGWDN+L G + E+R Sbjct: 119 EKAAVYYQQQLKEHPQKQRAVDYLKARGLSGEIARDFDMGYAPPGWDNLLNHLGQSDEDR 178 Query: 180 QSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q LID GML+ ++ + YDRFR+R++FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 179 QLLIDGGMLIEKEEENKLYDRFRDRIIFPIRDNRGRVIAFGGRVLGDDKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK ++LYGLY++++ N + RLLVVEGYMDVVALAQ+GIN++ A+LGT+T+ DH+ +F Sbjct: 239 FHKSKELYGLYQSRKANRQLQRLLVVEGYMDVVALAQHGINWSAATLGTATSTDHLNRVF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C+DGD AGR AA RAL++ALP M DGR+ RF+FLP GEDPD++VR G F Sbjct: 299 RQCPEVIFCFDGDEAGRKAAVRALDSALPAMEDGRRARFLFLPQGEDPDSMVRAIGASNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +E+A PL +LFN+ +DL + DGRAR+STLA PLI ++PG + + L ++ Sbjct: 359 IRLVEKAEPLEEYLFNAQADGLDLGSLDGRARMSTLAAPLIDKLPGGVFKELMMSSLADR 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQ-----------------------LKRTTMR--I 453 G+ + E L + P P +K TMR I Sbjct: 419 TGLSLEKLSEILQRHKRNKQATEPQPASPQLPDRAPLNTPASPKRRDKGLVKSETMRDPI 478 Query: 454 L--IGLLVQNPELA---TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR 508 L I LL+ +P+ A T+ L D+ P L EL++ +P T+ L+ H+ Sbjct: 479 LYAIALLLHDPKAASHVTIPATLLQSDDGNAPLLIAMLELLH---KRPDSTSAMLIGHWY 535 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 G + TL++L + E D+L H+ Sbjct: 536 GESWGETLQQLLHAEQFIPSTDIELELIDTLQHL 569 >UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0A5N0_ALHEH Length = 617 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 269/575 (46%), Positives = 369/575 (64%), Gaps = 30/575 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP FI++LL RTDI +++ ARV+LKK G N CPFH+EKTPSFTV KQFYH Sbjct: 1 MSGRIPDEFIDELLHRTDITEVVGARVRLKKTGANLLGLCPFHSEKTPSFTVAPAKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM+Y++++F E VE LA +E+P A + P +RH R LY ++ Sbjct: 61 CFGCGAHGTAIRFLMDYERMDFREAVEYLARQAGMELPAAAAAAPVP-DRHAR--LYHVL 117 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ++L++ P + A YL++RGLS ++ ARFA+GFAPPGWDN+LKR +R Sbjct: 118 AEAAIYYQEALRRHPASAKAVDYLKRRGLSGDIAARFALGFAPPGWDNLLKRH----RDR 173 Query: 180 QS-LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q+ L++AG+L+ D GR YDRFR+RVMFPIR++RG V+GFGGRVLG+ PKYLNSPET + Sbjct: 174 QADLVEAGLLIERDGGRVYDRFRDRVMFPIRNRRGTVVGFGGRVLGDGEPKYLNSPETPV 233 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKGR+LYGLYEA Q P LLVVEGYMDVVALAQ+G+ AVA+LGT+ T D + LF Sbjct: 234 FHKGRELYGLYEAVQAQRNPPLLLVVEGYMDVVALAQHGVQGAVATLGTAVTPDQVSRLF 293 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 RAT+ V+ C+DGDRAGR AAWRA+E +LP M +GR + + LP+GEDPD+LVR EG EAF Sbjct: 294 RATDRVVFCFDGDRAGRQAAWRAVENSLPAMREGRSVEILLLPEGEDPDSLVRAEGAEAF 353 Query: 359 EARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 R+E + PL+ + L + L D RARL A+PL+ ++P R + ++L Sbjct: 354 LRRLERETRPLAEYSLEELADGLRLDAVDDRARLVQKAVPLVRRLPVGIYRDFYVEKLA- 412 Query: 418 KLGILDDSQLERLMPKAAE----------------SGVSRPVPQLKRTTMRILIGLLVQN 461 +L ++E+ + + E +G R ++RT +R + LL+Q Sbjct: 413 ELAHTGVGRIEQAVEQGGEGARPTAPERPPAARRPAGGGRGAAMVRRTPVRQALTLLLQR 472 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 P L PL+ L LPGL L R+++ P + T LL+ ++G A L +L+ Sbjct: 473 PALVAHAGPLDQL-HGDLPGLDLLRQILEIARDHPDVNTAGLLQRFQGHPQEAALWRLAT 531 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIA 556 W ++ ++ E FTD L + + + EL A Sbjct: 532 W-ELPGGDL-EGEFTDCLERIRQACSSRQTSELRA 564 >UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q3JF10_NITOC Length = 574 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 260/527 (49%), Positives = 350/527 (66%), Gaps = 11/527 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI++L+ARTDIV+LID+RV L+K N+ ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 3 MGERIPQEFIDELVARTDIVELIDSRVPLRKASHNYVACCPFHNEKTPSFTVSPQKQFYY 62 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC HG AI FLM +D+L F+E VEELA + VP S Q ++ Q LY+++ Sbjct: 63 CFGCSVHGTAIGFLMAFDRLSFIEAVEELAQRAGMMVP---QSSKQQDYYNRHQGLYEVL 119 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L+ + YL +RGLS +IA F +GFAPP W+ +L P + Sbjct: 120 ACAAEFYQQQLEASAYQGQVKAYLRERGLSGPIIAEFGLGFAPPRWNALLHY--TRPSLK 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG+ ++ + R YDRFR+R++FPI D RGRVIGFGGR+LG+ +PKYLNSPET +F Sbjct: 178 SYLQAAGLTISKGEDRYYDRFRDRLIFPIHDYRGRVIGFGGRLLGDGSPKYLNSPETALF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLY+ ++ +RLLVVEGYMDV+ALA++ I YAVA+LGT+TT+DH+ LFR Sbjct: 238 HKGRELYGLYQVRKSLHRCDRLLVVEGYMDVLALAEHKIRYAVATLGTATTSDHLTRLFR 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T VI C+DGDRAG AAWRALETALP ++ GRQ++FMFLP GEDPDT+VR EG+ AFE Sbjct: 298 ITPAVIFCFDGDRAGYQAAWRALETALPLLSQGRQVQFMFLPQGEDPDTMVRAEGQTAFE 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 AR+ +A+PLS FL N+L +V+LS+ DG ARL LA PL++++P + L L Sbjct: 358 ARLAEAVPLSDFLLNNLRQKVNLSSVDGCARLVELARPLLARIPPGVYQDMLLARLAELA 417 Query: 420 GILDDSQLERLMPKAAESGVS-RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 I + + L P + V R + Q + R + +L+Q P++ V +NL Sbjct: 418 QIEQTTLIRHLSPGKKPTAVPLRRLEQGAASPTRRAVAILLQRPKMIQWVD--KNLSLRG 475 Query: 479 LPGLG--LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 L G G L ++LV+ + P L T LLE +R + LE+L+ W+ Sbjct: 476 LEGAGAELLQKLVDLLQNNPHLNTAALLERWRDSEMGRYLEQLAGWE 522 >UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7R7Q2_KANKD Length = 592 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 274/594 (46%), Positives = 365/594 (61%), Gaps = 40/594 (6%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ FI++LLAR DIVDLID+RV LKK G N+ ACCPFH EKTPSFTV+ +KQFYHCF Sbjct: 2 GLIPQHFIHELLARVDIVDLIDSRVPLKKTGANYKACCPFHGEKTPSFTVSQDKQFYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIERHQRQTLYQLMD 121 GCG HGNAI FLM YD+LEF + VEELAAM +EVP E S +++ +LY LM+ Sbjct: 62 GCGLHGNAIGFLMEYDRLEFPDAVEELAAMMGMEVPREETVSNKPKVD----TSLYDLME 117 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDN---VLKRFGGNPEN 178 + +YQ+ L+ A A YL+ RGLS E+ +FAIG+ P W N V + + + Sbjct: 118 KVANYYQKQLKNNKA--AIDYLKSRGLSGEIAKQFAIGYVPGEWRNLETVFPKLQQDKKL 175 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +Q L+D GML+ D+ YDRFR+R+MFPI+DKRGRVI FGGRV+G PKYLNSPET I Sbjct: 176 QQQLVDCGMLIRKDKSL-YDRFRDRIMFPIKDKRGRVIAFGGRVMGQGEPKYLNSPETPI 234 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK +LYGLY+A+Q N + +RLL+VEGYMDVVALAQ+ INYAVA+LGT+TT+ H+Q LF Sbjct: 235 FHKSNELYGLYQARQANRKLSRLLIVEGYMDVVALAQFDINYAVATLGTATTSSHLQQLF 294 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 RA ++ C+DGDRAGRDAA RALE L M +GR++R MFLPDGEDPD++VRK GKE F Sbjct: 295 RAARELVLCFDGDRAGRDAALRALEHGLSQMREGREIRLMFLPDGEDPDSMVRKVGKEQF 354 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E + +A PL F+ L QVDL + GR +L LA P + ++ + L K Sbjct: 355 EQMIGEATPLFEFILEHLSSQVDLGSVSGRGQLVHLAKPYLDKITDPIYHEFFSSALAEK 414 Query: 419 LGILDDSQLERLM--------PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 L +S+L ++ P+ E S P T+++ I LL+Q P LA + Sbjct: 415 AN-LSESKLAAIIEAPTQPQHPRKPEK--STPQSPKANKTLQLAITLLLQQPSLALAINN 471 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 L G L +L+ P + T LLEH+R + ++D +A + Sbjct: 472 YGWLQTLPDKGSKLLHQLLEIIHKTPKINTSMLLEHWR--------DNTKLYDRLASLAM 523 Query: 531 AE----------QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 +E Q D +N + ++R + L + GL+N+E+ E L Sbjct: 524 SEREERIQGNEQQELQDCINRLLLHARKIRVDYLQHKAAEQGLTNQEKSEYRQL 577 >UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK Length = 660 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 236/437 (54%), Positives = 320/437 (73%), Gaps = 4/437 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DL+ R DIVD++ +RV+LKK GKN+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M++D L+F + VEELA +EVP E G + + LY L+ Sbjct: 61 CFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D + FY+Q+L+ P +A YL+ RGLS E+ F +GFAPPGWDN+LK G + + Sbjct: 121 DAASEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + +IDAG+L+ N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KVMIDAGLLIENAESGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA++ N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR AAWRALE+ L + DGR+ RF+FLP+GEDPD+LVR EG +AF Sbjct: 301 RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAF 360 Query: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+ Q + PL+ + F L + D + +G+A ++TLA PLI ++PG LR +R L Sbjct: 361 MARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQLMRNRLKE 420 Query: 418 KLGILDDSQLERLMPKA 434 G LD Q+E+L +A Sbjct: 421 ITG-LDPQQVEQLAQQA 436 >UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS Length = 656 Score = 490 bits (1262), Expect = e-137, Method: Compositional matrix adjust. Identities = 234/440 (53%), Positives = 319/440 (72%), Gaps = 5/440 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIVD++ +RV+LKK GKN+ ACCPFH EKTPSF+V+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D L+F + +E+LA +E+P E P + + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEIPREESGRPHKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY+Q+L+ P +A YL+ RGL+ E+ F +GFAPPGWDN+ K + + Sbjct: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++IDAG+LV N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA+++N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR+AAWRALE L + DGR+ RF+FLP+GEDPDTLVR EG +AF Sbjct: 301 RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360 Query: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+ Q A PL+ + F L + D + +G+A ++TLA PLI +VPG LR +RQ L Sbjct: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLLE 420 Query: 418 KLGILDD--SQLERLMPKAA 435 G+ + SQL P+ A Sbjct: 421 ITGLSGEAVSQLAHSAPQDA 440 Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 58/129 (44%) Query: 453 ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNN 512 I + L+ +P+LA V ++ + L+ P L + QL+ + GT Sbjct: 516 IALRTLIHHPQLAEKVESADHFANASNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQ 575 Query: 513 AATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELW 572 L+ L+ + + D + EQ F D++ + +ELI R R LS EE++++ Sbjct: 576 GRLLKALAEKEWLIDGDNLEQQFLDTITRLSAGQHTQTLDELIKRARQPDLSAEEKIQIA 635 Query: 573 TLNQELAKK 581 ++L K+ Sbjct: 636 KQMRDLLKQ 644 >UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=Q1N3T7_9GAMM Length = 661 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 237/446 (53%), Positives = 310/446 (69%), Gaps = 4/446 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R +IVD++D+R+KLKK GKN ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLHRVNIVDVVDSRIKLKKAGKNHSACCPFHNEKTPSFTVSSDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M YD ++F + VE LA +EVP E S ++ +R LY+LM Sbjct: 61 CFGCGAKGNAVGFVMEYDNVDFPQAVEMLADSVGMEVPREEVSPQQAKKQEERTNLYELM 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 N FYQ+ L+ +A YL+ RGLS + F IGFAPPGW N+ + E+ Sbjct: 121 GSANEFYQRQLRYHDAKQAAVDYLKNRGLSGKAAKFFNIGFAPPGWQNLQDSLANDDESL 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +++ AG+ + NDQGR YDRFR R++FPIRD RGR IGFG R LG+D PKYLNSPET IF Sbjct: 181 AAMVTAGLTIKNDQGRHYDRFRNRIIFPIRDVRGRTIGFGARTLGDDKPKYLNSPETPIF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +KG++LYGLYE +Q R L+VEGYMDVVAL ++GI+YAVA+LGT+T+ H+Q LF+ Sbjct: 241 NKGQELYGLYECRQIRQPLKRFLIVEGYMDVVALHEFGIHYAVATLGTATSDTHLQKLFK 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ C+DGD AGR AA R LE LP + DG+Q+RFMFLP+GEDPD+LVRKEGK+ FE Sbjct: 301 IAPEIVFCFDGDEAGRRAAKRGLELVLPIIEDGQQIRFMFLPEGEDPDSLVRKEGKDGFE 360 Query: 360 ARMEQAMPLSAFLFNSLMPQV-DLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 RM+ A LS FL +L + D ++ +GRARL+ LA PLI +PG LR Q+L Sbjct: 361 LRMQDADGLSEFLLQTLKDDIDDPASLEGRARLAKLAAPLIKNIPGIALRSLFWQDLKEH 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVP 444 I D +L++L A+ ++ P P Sbjct: 421 THI-DVDELKQLAESEAKPELA-PAP 444 >UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRW9_9GAMM Length = 665 Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust. Identities = 270/652 (41%), Positives = 389/652 (59%), Gaps = 80/652 (12%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP+ FI+DLL R DIVD+++ RV LKK GKN+ ACCPFH+EK+PSFTV +KQFY+ Sbjct: 1 MAGRIPQTFIDDLLDRVDIVDVVNGRVPLKKAGKNYKACCPFHDEKSPSFTVAQDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M +D+L+F+ VE LA LE+P EA P +I + Q+ LY ++ Sbjct: 61 CFGCGAGGNALGFVMEFDRLDFLPAVEMLARNAGLEIPREAAQDP-KISK-QKDNLYSIL 118 Query: 121 DGLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +++Q L+ A SA YL+ RGLS +V A++ +G+APPGWDN+LK G + + Sbjct: 119 TESDRYFRQQLRTHAGAASAVDYLKARGLSGQVAAQYGMGYAPPGWDNLLKAVGTDEQRT 178 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L ++GMLV ++ + YD FR R+ FPIRD+RGR +GFGGRVL + PKYLNSPET + Sbjct: 179 ALLNESGMLVIKPEEKKQYDFFRHRITFPIRDQRGRTVGFGGRVLDDSKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR+LYGLYEA+Q E L++VEGYMDV+ALAQ+ IN AVA+LGT+ T H+Q +F Sbjct: 239 FSKGRELYGLYEARQKLKEIPCLIMVEGYMDVIALAQFEINNAVATLGTALTESHLQKIF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ ++ C+DGD AGR AA RAL+TALP M DG +F+FLPDGEDPDT+VR+ GK+ F Sbjct: 299 RYTSEIVFCFDGDSAGRKAAARALDTALPEMRDGVSAKFLFLPDGEDPDTMVRQLGKQEF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++++A PLS FLF L +D ST DG+ARLS + P I+++P R + +EL ++ Sbjct: 359 NEQIDRAQPLSEFLFEQLSDGIDSSTADGKARLSKVCAPQINRIPQGVFRQLMLEELSSR 418 Query: 419 LGILDDSQLERLM---PKAAESGVS--------RPVPQL--------------------- 446 GI ++ + + P A S +P P+L Sbjct: 419 TGISAENLRDYVATHKPPAGRGNASQQTHQPAHQPAPRLASQPTAHTSNQAPTDEFYSGP 478 Query: 447 --------------------KRTTMR-----ILIGLLVQNPELATLVPPLENLDENKLPG 481 +R+ +R +L LLV +P+LA V +E L + P Sbjct: 479 PPDDIYGDGDYEPYPETVAVRRSKIRLSPIKVLSALLVNHPQLAEYVEDIEMLSVSADPD 538 Query: 482 LGLFRELVNTCLSQPGLT-TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE-------- 532 + LF +++ S P + T + ++ T + T +L + +A + + Sbjct: 539 MALFLKILALINSDPTCSKTSHIFARWQATYSDQT--ELQLLKTLAGSELHQPPKGTGRD 596 Query: 533 --QTFTDSLNHM----FDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 Q F DSLNH+ F+SL R+ + + T L+ + +LW ++ +L Sbjct: 597 DNQEFVDSLNHVIRDAFESLPPERKADFLLAAET--LNERQIKQLWKIHMQL 646 >UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q21MV0_SACD2 Length = 656 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 228/419 (54%), Positives = 306/419 (73%), Gaps = 3/419 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP+ FI+DLL R DIV++ID RVKLKK GKN+ ACCPFH EKTPSFTV+ +KQFY+CFG Sbjct: 3 RIPQSFIDDLLNRLDIVEVIDHRVKLKKAGKNYSACCPFHEEKTPSFTVSPDKQFYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA+GNA+ FLM Y++ FV+ VE LA + ++VP E + + QR LY ++ Sbjct: 63 CGANGNAVGFLMEYERQGFVDAVESLARVAGMQVPKETTEKDVKHAKKQR-GLYDILGLA 121 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +T+YQ+ L++ + A YL+ RGLS + F +G+APPGWDN+L + G N E+R L Sbjct: 122 STYYQKQLKEHSSRERAVSYLKGRGLSGAIARDFGMGYAPPGWDNLLVKLGTNEEDRHLL 181 Query: 183 IDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +++G+++ + +G+ YDRFR R+MFPI+D RGRVIGFGGRVLG+D PKYLNSPET +F K Sbjct: 182 VESGLVIRKEGEGKLYDRFRHRIMFPIKDTRGRVIGFGGRVLGDDKPKYLNSPETPVFSK 241 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR+LYGLYEA+Q N + RLLVVEGYMDV+ALAQYG+ AVA+LGT+ DH++L FR Sbjct: 242 GRELYGLYEARQSNRKLERLLVVEGYMDVIALAQYGMRNAVATLGTACGEDHLKLAFRYV 301 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 N V+ C+DGD AGR AA RAL ALP M DGRQ+RF+FLP+G+DPDTLVR+ G E F A+ Sbjct: 302 NEVVFCFDGDNAGRTAAKRALVNALPAMEDGRQIRFLFLPEGQDPDTLVRQIGAERFTAQ 361 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +E +PL FLF+++ +D+++ +GRAR LA PL++ +P R + L + G Sbjct: 362 IENGVPLEEFLFDAVAEGIDVNSMEGRARFGKLAAPLLNTLPNGIYRELMFANLAKRTG 420 >UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF7_9GAMM Length = 656 Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/412 (56%), Positives = 296/412 (71%), Gaps = 6/412 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARV-KLKKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRIP+ FI+DLLAR +I+D++D RV KLK+ GKN+ CPFH EKTPSFT N EKQFY Sbjct: 1 MAGRIPQHFIDDLLARINIIDVLDGRVQKLKRTGKNYSGLCPFHKEKTPSFTANQEKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQ 118 +CFGCGA GNA+ FLM+Y+ L F E VEELA +EVP + P Q E R LY+ Sbjct: 61 YCFGCGAGGNALGFLMDYENLNFPEAVEELAKTAGMEVPRD--DSPQQREHDLRLSKLYE 118 Query: 119 LMDGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 L+ +++Y+ L+ SA YL+ RGLS + F+IGFAP GWDN+L G + E Sbjct: 119 LLKAASSYYEDQLRSHQTRESAVNYLKSRGLSGQAAKAFSIGFAPSGWDNILNHLGKSEE 178 Query: 178 NRQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 Q L ++G+L+ N++ S YDRFR R+MFPIRD+RGRVIGFGGRVLG+D PKYLNSPET Sbjct: 179 EIQLLEESGLLIHNEERDSRYDRFRNRIMFPIRDQRGRVIGFGGRVLGDDKPKYLNSPET 238 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 FHK R+LYGLYEA++ N + RL++VEGYMDVV LAQ+ I+YAVA+LGT+TT+ H++ Sbjct: 239 PTFHKSRELYGLYEARKHNQKLERLIIVEGYMDVVGLAQFDIHYAVATLGTATTSQHLER 298 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 LF+ VI C+DGD AGR+AA RAL+T LP + DG++ RF+FLPDGEDPD+LVR+EGKE Sbjct: 299 LFKIVPEVIFCFDGDNAGREAAMRALKTTLPVIEDGKEARFLFLPDGEDPDSLVRQEGKE 358 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 FE R+ A PLS F F DL + DGRAR ST LP I+ + L+ Sbjct: 359 NFENRISTAQPLSEFFFKCHSEGADLDSMDGRARFSTEVLPAINSMKTSLLQ 410 >UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EM4_THICR Length = 576 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 221/406 (54%), Positives = 291/406 (71%), Gaps = 4/406 (0%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IPR FI DLLAR DIV +I+ RV LKK G N+ ACCPFH+EKTPSF V+ +KQFYHCF Sbjct: 7 GTIPRSFIEDLLARADIVQVINQRVPLKKAGTNYKACCPFHDEKTPSFNVSAQKQFYHCF 66 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+A+ FL +YD L FVE VE LAAM+ +EVP E + ++ + + LY +M Sbjct: 67 GCGASGDALKFLTDYDGLSFVEAVETLAAMNGMEVPREKLTQKQAQQQQKTRDLYDVMHS 126 Query: 123 LNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + FY+Q L+ P + A+ YL++RGL+ E+ F IGFAPPGWD+++ + +Q Sbjct: 127 VAKFYRQQLKNHPTSEEAKTYLKQRGLTSEIAKEFVIGFAPPGWDSLVSNLKADATLKQQ 186 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFH 240 L++ GML+ + G++YDRFR R+MFPIRD RGRVI FGGRVL ++ PKYLNSPET IFH Sbjct: 187 LVETGMLIQKEDGKTYDRFRHRIMFPIRDGRGRVIAFGGRVLSSEEQPKYLNSPETPIFH 246 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K LYGLYE +Q + N +LVVEGYMDVVALAQ+GI AVA+LGT+ T +H+ ++FR Sbjct: 247 KTVTLYGLYEMRQARQQVNHILVVEGYMDVVALAQFGIRNAVATLGTAITTEHLDIMFRQ 306 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 N V+ C+DGD AG+ AAW+ALE ALP M D R ++F+FL GEDPD+ VR+EG E F+ Sbjct: 307 VNEVVFCFDGDEAGQKAAWKALELALPKMQDTRSIKFLFLDQGEDPDSTVRQEGVEGFQK 366 Query: 361 RMEQAMPLSAFLFNSLMPQVD--LSTPDGRARLSTLALPLISQVPG 404 R++QAM LS FLF L+ ++ +ST +G+ +L LA P I+ PG Sbjct: 367 RIQQAMTLSGFLFKGLIGRLGSPVSTVEGQQQLIALATPYITSAPG 412 >UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A8PNJ9_9COXI Length = 585 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 255/581 (43%), Positives = 362/581 (62%), Gaps = 20/581 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FIN+LLAR DIV LIDARV L+K+GKN+ ACCPFH+EKTPSFTV EKQFY+CFGC Sbjct: 6 IPQEFINELLARVDIVQLIDARVPLRKKGKNYIACCPFHSEKTPSFTVTPEKQFYYCFGC 65 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GNA +FLM+Y+KL F+E V LA +E+P A Q LY L++ + Sbjct: 66 AISGNAFNFLMDYEKLSFLEAVSILAESLGMEIPHAA---KQQEVYKDSANLYTLLEEVA 122 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY QQ + R YL++R LS E++ +F +G+AP GWD +LK F E L+ Sbjct: 123 QFYANERQQ--NKTVRYYLKQRNLSDEIMTQFRLGYAPLGWDTLLKAFKKETER---LLT 177 Query: 185 AGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L+ +G+ Y DRFR+RV+FPIRD++GRVIGFGGR + PKYLNSPET +FHKG+ Sbjct: 178 VGLLIKKSKGQGYYDRFRDRVLFPIRDRKGRVIGFGGRTVTQGEPKYLNSPETLLFHKGK 237 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGLYE Q N R+LVVEGYMDV+AL Q G +AVA+LGT+ + D + L T Sbjct: 238 ELYGLYEVFQHNRHVERILVVEGYMDVLALFQAGFPFAVATLGTAMSRDQLSRLMSHTQE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 +I C+DGD AG+ AAWR LE +L +TDG RF+ LP GEDPD+ ++K+G + F ME Sbjct: 298 IIFCFDGDSAGKKAAWRVLEQSLALLTDGYIFRFLCLPHGEDPDSFIQKKGADEFMTFME 357 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA L+ FLF+ L+ QVD++ +G+ARL+ LA+PLI +V ++ L ++L + I D Sbjct: 358 QAQSLTEFLFSGLLAQVDITQLEGKARLAKLAVPLIEKVTQGIMQYKLFEQLARLVNI-D 416 Query: 424 DSQLERLM------PKAAESGVSRPVPQLKR-TTMRILIGLLVQNPELATLVP--PLENL 474 L+++ P PV ++ R + MR+ I LL+Q P +A + + L Sbjct: 417 VMTLKKITTHTTNHPLKTMQKKINPVSKVNRFSPMRLAIALLIQFPHIAQSLSDKQCQIL 476 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN-NAATLEKLSMWDDIADKNIAEQ 533 + KLPG L +L + QP LT+ LLE++R + L++L + K+ + Sbjct: 477 NTLKLPGSDLLVQLFSVIKQQPELTSAMLLEYWRDDEVHYKILKQLMGYSITIPKSGVQA 536 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 F D L + S++E + + L+ + + GL+ +E+ +L+ L Sbjct: 537 EFDDLLKFLKKSVIENQIDNLLQQGKQTGLNVQEKKQLYHL 577 >UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6R1_CHRVI Length = 582 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 261/579 (45%), Positives = 361/579 (62%), Gaps = 18/579 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+P FI+ LLARTDIV+LI +R++L+K G+ F A CPFH+EKTPSF+V+ +KQFYH Sbjct: 1 MAGRLPPEFIDQLLARTDIVELIGSRLQLRKAGREFQARCPFHDEKTPSFSVSPDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM YD L F E VEELA LE+P G LY+LM Sbjct: 61 CFGCGAHGNAIGFLMEYDHLPFREAVEELAERAGLEIP---NDGTPMQAAPDHGPLYRLM 117 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +Y++ L++ P A A YL++RGL+ E+ A F +G+AP + VL +FG + R Sbjct: 118 EDAALYYRRQLREHPEAQRAVAYLKERGLTGEIAAHFGLGYAPARGNPVLAQFGRDTATR 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L G LV+ G YD+FR+RV+FPIRD+RGRVIGFGGRVLG+ PKYLNSPET IF Sbjct: 178 TRLQTVG-LVSEQDGWPYDKFRDRVLFPIRDRRGRVIGFGGRVLGDGKPKYLNSPETPIF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGL+EAQQ N + L+VVEGY+DV+ALAQ GI AVA+LGT+TT +H+ L + Sbjct: 237 HKGRELYGLHEAQQANRTFDALIVVEGYLDVIALAQSGITNAVATLGTATTPEHLNQLLK 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ C+DGDRAGR AAW+ALETALP T + +RF+FL +G+DPDTLVR+EG E F Sbjct: 297 LAPDIVFCFDGDRAGRAAAWKALETALPLATGHQAIRFLFLSEGDDPDTLVRREGAEGFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + ++QA PLS FLF L +D +T DGRAR ++ P I ++P R L + L + Sbjct: 357 SGLKQAQPLSDFLFEHLSASMDTTTMDGRARFASQLQPYIDRLPAGFYRDLLIRRLADFT 416 Query: 420 G----ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL-ENL 474 G L + R P A + +RP + + +I LL+ P+LA L ++ Sbjct: 417 GAPAQALRPAVARRRQPAARLAQPTRP------SLVAQVIALLLDRPDLAPQALALNDDW 470 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI--AE 532 + G+ + +L++ P L+ +LLE +R + L++LS+ + D A Sbjct: 471 RRSTQRGIDVLIQLLDILRQSPDLSKARLLERWREHPHFGYLQRLSVDPFLRDMTPEGAG 530 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 T ++ + D + E +L+ + + EER L Sbjct: 531 AELTGAIRRLSDEVREHEWRQLLNKRSPSEWTPEERARL 569 >UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS Length = 652 Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/431 (54%), Positives = 298/431 (69%), Gaps = 4/431 (0%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 RIP F+ DLLARTD+V+LIDARV LKK G+N+ ACCPFH EKTPSFTV +KQFY+CF Sbjct: 2 ARIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYYCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMD 121 GCGA GNA FLM Y+ L F E V++LA +EVP + ++ R Q+LY L+ Sbjct: 62 GCGASGNAAGFLMEYEHLNFPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDLLS 121 Query: 122 GLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY Q L+Q P A YL+ RGLS E+ +FAIGFAPPG+DN++ + + Sbjct: 122 RAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGFAPPGYDNLINGLSLTETSLE 181 Query: 181 SLIDAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+LV D R+YD+FR+R++FPIRD RGR IGFGGRVLG+ PKYLNSPET +F Sbjct: 182 QAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETPVF 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG++LYGL+E +Q +RL VVEGYMDV+AL Q+G+ VA+LGT+TT DH + LFR Sbjct: 242 HKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKLFR 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 N VI C+DGD+AG AAWRALE+ LP + DG+Q+RF+FLPDGEDPDTLVR++G EA Sbjct: 302 QVNEVILCFDGDKAGVRAAWRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEALR 361 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A ++A LS +LF L +DL T DGR RL+ LALP + + G R L +EL ++L Sbjct: 362 ALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYLDKPAGPVYRALLTEEL-SRL 420 Query: 420 GILDDSQLERL 430 LD L +L Sbjct: 421 TRLDKESLIQL 431 >UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS Length = 666 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 225/426 (52%), Positives = 302/426 (70%), Gaps = 8/426 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP FI++LLARTD+ D++ +R+ LKK G+N+ A CPFHNEK+PSF++N KQFY+ Sbjct: 1 MAGRIPDQFIDELLARTDLTDVVASRISLKKTGQNYSALCPFHNEKSPSFSLNPNKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M +D L+FV+ +E LA +EVP E G+ P + E Q L + + Sbjct: 61 CFGCGAGGNAISFVMEHDHLDFVDAIEVLAKDAGMEVPREQGA-PDRYE--QNAELLKRL 117 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FYQQ L Q P A YL K RGLS ++ F +G+APPGWDN+LK+ G E+ Sbjct: 118 SESSQFYQQQLTQHPDKKKATDYLSKDRGLSGQIAKVFGLGYAPPGWDNLLKKVGTRAES 177 Query: 179 RQSLIDAGMLV-TNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 ++ L+ GML+ DQ G YDRFR+R++FPIRD RGRVI FGGR G++ PKYLNSPET Sbjct: 178 QEQLLLGGMLIEKKDQPGHYYDRFRDRIIFPIRDSRGRVIAFGGRAFGDEKPKYLNSPET 237 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F K ++LYGL+EA+Q+ ++++VVEGYMDV+ LAQ+GI AVA+LGTS + HI+ Sbjct: 238 PVFQKSQELYGLFEAKQNTPILDQIIVVEGYMDVIVLAQHGITNAVATLGTSVNSQHIRK 297 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 LF+ + VI C+DGD+AGR AA R LE +LP M D +Q+RF+FLP+GEDPD+LVRKEGKE Sbjct: 298 LFKLVSKVILCFDGDKAGRAAAIRGLEASLPVMQDEKQVRFLFLPEGEDPDSLVRKEGKE 357 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQEL 415 AF R+E A LS LF+ QV L +G A+ + A+ +I Q+P E T R L ++L Sbjct: 358 AFNHRLEDASSLSHVLFDHARNQVTLGDEEGEAQFARNAMEMIKQIPKELTFRSVLIRQL 417 Query: 416 GNKLGI 421 ++ GI Sbjct: 418 SDQSGI 423 >UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYX6_CHRSD Length = 613 Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust. Identities = 256/544 (47%), Positives = 337/544 (61%), Gaps = 25/544 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP+ FI+DLLARTD+V+++ RV+LKK G+N+ CPFH EK+PSFTV+ EKQFYH Sbjct: 1 MAGQIPQRFIDDLLARTDVVEIVGERVQLKKAGRNYSGLCPFHQEKSPSFTVSAEKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGCG HGNA+ FLM +D L F E VE+LA+ L+VP E P +R +R + L Sbjct: 61 CFGCGVHGNALRFLMEFDHLRFPEAVEQLASRLGLDVPREGADDPQAQQRERRREEAVNL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ +F+++ L AR YLE+RGLS +++ F IGFAP W+ + + + Sbjct: 121 LELSASFFRERLAMSEGGDARDYLERRGLSADIVREFGIGFAPDKWEALKRHLTERGISD 180 Query: 180 QSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 I+ G+LV D GRSYDRFR RVMFPIRD +GR I FGGRVLG+ PKYLNSPET + Sbjct: 181 AVQIEYGLLVHREDSGRSYDRFRNRVMFPIRDWKGRTIAFGGRVLGDAKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKGR+LYGLYEA+Q NA R+LVVEGYMDVVALAQ+GI A A+LGTS + DH+Q LF Sbjct: 241 FHKGRELYGLYEARQANARLERMLVVEGYMDVVALAQFGIRNACATLGTSLSEDHLQRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ C+DGDRAGR AA RALET LP M DGRQ+RF+FLP+G+DPD+LVR+EG EAF Sbjct: 301 RLVGEVVFCFDGDRAGRQAARRALETVLPSMIDGRQVRFLFLPEGDDPDSLVRREGAEAF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E R+ A PLS FLF+ DL + R R +T L + ++P L+ L +EL + Sbjct: 361 ENRVLCAAPLSEFLFDQAAEGRDLQRIEDRERFATAVLRALERLPEGVLKSLLLRELSQR 420 Query: 419 LGILDDSQLERLMPKA----------AESGVSRP-----VPQLK---RTTMRILIG---- 456 G+ + + + L+ +A A+ S P P K R L+G Sbjct: 421 TGV-EQANFQALLARADTSQAPHDEGADEASSAPEDAGETPARKAGARDGALGLVGRLLH 479 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 LLV P L + +P + + + L E+V + LL H+ GT L Sbjct: 480 LLVHEPALVSRLPESLDWCPDGVGDGALCHEVVRLIRAGGYRNAQVLLAHFHGTPEGERL 539 Query: 517 EKLS 520 L+ Sbjct: 540 AWLA 543 >UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN Length = 576 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 250/586 (42%), Positives = 359/586 (61%), Gaps = 28/586 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ FI+DLL RTD+V+LID V LKK+G + ACCPFHNEKTPSF V +KQFYH Sbjct: 1 MSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-TLYQL 119 CFGCGA GNAI F+MNY F + VE L ++ P + G+G E+H+ LY L Sbjct: 61 CFGCGASGNAISFVMNYLNQGFTDAVETLRRAW-VKCPRD-GTG----EKHKSSLNLYNL 114 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M ++ +YQ+ L+ A YL RGLS E+ R+ +G+AP GW N+ K F P N+ Sbjct: 115 MSEVSQYYQKKLKYN-GQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAF---PNNQ 170 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDI 238 + L+ GML+ +D+G+ YDR+R R+MFPI D+ GRVIGFGGRVL D PKYLNSPET + Sbjct: 171 RELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVL 230 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K R+LYGL++ P+ ++VVEGYMDV+ALAQ+GI VA+LGT+T+ HIQLL Sbjct: 231 FQKSRELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLA 290 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T ++I C+DGD AG+ AAWRALE++LP++ G F+FLP+ DPD+LVR EGK F Sbjct: 291 KHTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGF 350 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++QA PL F F++L ++LS P G+ +L P + ++ + + L +L ++ Sbjct: 351 LELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDL-SR 409 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQ--LKRTTMRILIGLLVQNPELATLV-----PPL 471 L ++ +L L+ +E S+P Q + R+ +RI I LL+QNPE+ ++ P L Sbjct: 410 LTHIESHRLTNLITDKSE---SKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPAL 466 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 + E+ + +L+ +P T L+E +R ++ + KL+ WD + Sbjct: 467 LHEQEHHIL-----LKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQEL 521 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 + F D L + E+ + I + R GL+ ERL L L +E Sbjct: 522 TKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTEAERLSLQNLLKE 567 >UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 RepID=A4BE36_9GAMM Length = 621 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 229/447 (51%), Positives = 309/447 (69%), Gaps = 4/447 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP FI+ LL RTDI+++I R+ LKK+GK++ ACCPFHNE +PSF+VN KQFY+ Sbjct: 1 MAGLIPNDFIDSLLDRTDILEVIGNRIDLKKKGKDYWACCPFHNENSPSFSVNPGKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G A+ FL YD L FVE++EELA + +EVP E S ++ ++ QR+TL+ LM Sbjct: 61 CFGCGASGTAVKFLQEYDNLSFVESIEELARIAGVEVPREEVSEKARQQQQQRKTLHDLM 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + ++ L Q P A + Y+ RGL+ + + F IGFAPPGWDN+++ F NR Sbjct: 121 NSCADYFAHQLYQHPYAQGVQDYILGRGLTEDTVHTFQIGFAPPGWDNLIQHFRSENTNR 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDI 238 +L+ GML ND GR YDRFR R+MFPIRD +GRVI FGGRV+ D PKYLNSPET I Sbjct: 181 -ALLKVGMLTQNDNGRIYDRFRNRLMFPIRDIKGRVIAFGGRVMSADEKPKYLNSPETPI 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG +LYGLYEA++ + + +++VEGYMDVVALAQ+G+ AVA+LGT+T+ H+Q LF Sbjct: 240 FHKGHELYGLYEARKALKDFDNIIIVEGYMDVVALAQHGVRNAVATLGTATSETHVQRLF 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ ++ C+DGD AGR AA RAL + + DG Q RF+FLPDGEDPDTLV+KEG + F Sbjct: 300 KQTSEIVFCFDGDEAGRRAAIRALTNTMSSLKDGLQARFLFLPDGEDPDTLVQKEGHDGF 359 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R++QA L FL+ L Q D+S DG+ARL++LA I++VP ++ L +L N Sbjct: 360 MRRVKQAQSLPDFLYQHLQTQADISRLDGKARLASLAQGWINKVPEGFMKQLLLNQLSNL 419 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQ 445 +G L Q+E+ S + P+P+ Sbjct: 420 VG-LSIEQIEQQFKPEPPSVPAEPMPE 445 >UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y7B9_NITMU Length = 592 Score = 443 bits (1140), Expect = e-123, Method: Compositional matrix adjust. Identities = 253/597 (42%), Positives = 355/597 (59%), Gaps = 42/597 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + FI +LL RTDIVD+I+ V L++ G N+ ACCPFH+EKTPSFTV+ KQFYHCFGC Sbjct: 2 ISQSFIQELLDRTDIVDVIERDVPLRRAGANYSACCPFHSEKTPSFTVSPIKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF---EAGSG---------PSQIERHQ 112 GAHGNAI F+M YD + FVE V ELAA L+VP E GSG P+ E + Sbjct: 62 GAHGNAIGFVMEYDGMHFVEAVSELAARIGLQVPAQQAETGSGSQSDSARVKPNGTE-YS 120 Query: 113 RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L + M FY++ L+ ++ +A YL++RGL+ ARF IG+AP GW N+ F Sbjct: 121 PGALLEAMKIAARFYREQLK--LSKNAIDYLKQRGLTGATAARFGIGYAPAGWQNLHTSF 178 Query: 173 GGNPENRQS--LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKY 230 G P+N Q L+ AG++V D G+ YDRFR+R+MFPI + +G ++GFGGRVL PKY Sbjct: 179 PGQPDNAQKRLLVQAGLMVEGDGGKCYDRFRDRIMFPIVNLKGMIVGFGGRVLEKGEPKY 238 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 LNSPET +F KGR+LY L+ A++ E +++VVEGYMDVVAL+Q+GI YAVA+LGT+TT Sbjct: 239 LNSPETPLFQKGRELYNLFGARRAIREAGKVIVVEGYMDVVALSQHGIEYAVATLGTATT 298 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 HIQ L R T+N++ C+D D AG+ AAWRALE +L + DG+ + F+FLP+GEDPD+ + Sbjct: 299 PYHIQKLLRQTDNIVFCFDADSAGKKAAWRALEDSLAQLADGKSIGFLFLPEGEDPDSYI 358 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 R G+ AFE +EQ +PLS FLF L + DL + +GRA+L A PL+++V L + Sbjct: 359 RNHGRSAFEKLLEQTLPLSVFLFRELSARTDLKSSEGRAKLVQDAKPLLARVAAPGLALM 418 Query: 411 LRQELGNKLGILDDSQLE------RLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPE- 463 L + L G L + +LE R+ SRP P + L+ +L+ +P Sbjct: 419 LVKRLAEISG-LSERELEGILKIRRVTAFPVREKPSRPKPV---SPYEWLLQILLYHPAY 474 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLE----HYRGTNNAATLEKL 519 + L L D+ + LV P + G L+ H+R + A LE+ Sbjct: 475 IQKLDRELLAYDQEYEKEVAALAALVEFIDVHPHMGEGTLIPLMTVHFRASPYRAILEQA 534 Query: 520 SM----WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT-HGLSNEERLEL 571 + WD D E F ++ + + ++ +Q + ++ L+ EER EL Sbjct: 535 ASKTLGWDGELD---LEAEFAGAMARLHE--MKRKQRMAVLHNKSLSALTPEEREEL 586 >UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J438_COXB2 Length = 572 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 230/506 (45%), Positives = 326/506 (64%), Gaps = 16/506 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI DLL+RTDIV+LI +RV +KK+G N+ CPFH EKTPSFTV+ KQFY+ Sbjct: 20 MNKRIPQSFIQDLLSRTDIVELIQSRVAIKKRGANYLGLCPFHTEKTPSFTVSSSKQFYY 79 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAI FLM +D++EF+E V +LA +E+P E E + + L+ Sbjct: 80 CFGCAAHGNAISFLMAFDRMEFLEAVTDLANQLGIEIPHETIGQSKTAEINDD---FVLL 136 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ FYQ+ L++ + +A YL+ RGL+ E +FAIG+AP W+N L+ F N + + Sbjct: 137 TTISRFYQRELKR--SPTAIHYLKSRGLTGETAKQFAIGYAPNAWEN-LRPFAKNSKTQS 193 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ G+LV + R +DRFR R+MFPIRD RGRVI FGGR +G D PKY+NSPET +F Sbjct: 194 QLVTHGLLV-KKENRCFDRFRHRIMFPIRDVRGRVIAFGGRSVGEDLPKYMNSPETPLFQ 252 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG +LYGL+EA + + R L+VEGYMDVV+L Q+GI YAVA+LGT+T+ H+Q L R Sbjct: 253 KGNELYGLHEACKTHRPLPRALIVEGYMDVVSLHQHGITYAVATLGTATSVRHLQKLLRY 312 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+ +I C+DGD AGR AAWRAL +ALP M +G +RF+FLP GEDPD+L++K G+EAFE Sbjct: 313 THEIIYCFDGDDAGRQAAWRALTSALPVMREGIHIRFLFLPQGEDPDSLIQKIGREAFEN 372 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +++QA PLS F+ L ++ + + D +A + AL + +P L +EL +L Sbjct: 373 KIDQAPPLSEVFFSHLQKEIPIRSIDDKAAFAKQALEHLRPMPRGIFYQLLLEELAQRL- 431 Query: 421 ILDDSQLERLM--PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 LD S+L+ L P + +R VP L + I L Q P L +++ + + +++ Sbjct: 432 TLDLSELDSLTVAPPPMPAASTR-VPSLAYHALSI----LAQAPSLVSVIQDM-TIPKSE 485 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLL 504 P + ++V +P TG+LL Sbjct: 486 DPQIQFLAKMVLFLKKRPVANTGELL 511 >UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3PKA2_CELJU Length = 694 Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust. Identities = 227/423 (53%), Positives = 305/423 (72%), Gaps = 2/423 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIVD++D+RVKLK+ GKN+ ACCPFH+EKTPSFTV+ EKQFY+ Sbjct: 1 MAGLIPQSFIDDLLDRVDIVDVVDSRVKLKRSGKNYSACCPFHDEKTPSFTVSPEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M+Y++L F E VE+LA + LEVP E S +++++Y L+ Sbjct: 61 CFGCGASGNALGFVMDYERLSFPEAVEQLARITGLEVPREVQSEAEAKREQEKKSIYSLL 120 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + FYQ L+Q P A YL+ RGL + + +GFAPPGWDN+LK G + +++ Sbjct: 121 EKADDFYQHQLRQHPSKHLAVNYLKGRGLDGKTAKTYGVGFAPPGWDNLLKTLGQDDDDK 180 Query: 180 QSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 LI GML+ +Q + YDRFR R+MFPIRD RGRVIGFGGRVLG+D PKYLNSPET + Sbjct: 181 HLLIQGGMLIHQEQEKKLYDRFRHRIMFPIRDTRGRVIGFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA+ E RLLVVEGYMDVV+LAQ+GI Y VA+LGT+ DH+ F Sbjct: 241 FHKGQELYGLYEARLAYRELPRLLVVEGYMDVVSLAQFGIGYGVATLGTACGPDHLDRAF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ V+ C+DGD+AGR AA RAL+ AL M DGR ++F+FLP+GEDPDTLVR+ G + F Sbjct: 301 KYTSEVVFCFDGDKAGRSAALRALDAALETMADGRAVKFLFLPEGEDPDTLVRQIGPDKF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E +E A+PL +LF+++ +++ T +GRA S A PL+ ++P R + + L + Sbjct: 361 EHMIELAVPLEDYLFDAVAEGLNIRTMEGRATFSKRAAPLLDRLPKGVFRELMFENLATR 420 Query: 419 LGI 421 G+ Sbjct: 421 TGL 423 >UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB Length = 590 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 238/531 (44%), Positives = 328/531 (61%), Gaps = 24/531 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI++LLA+TDIVD+ID +V LKK G N+ ACCPFH EKTPSF+V+ KQFYHCF C Sbjct: 2 IPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFSC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR----QTLYQLM 120 GAHG+AI F+M + L F E V+ LA + VP G + R +R QTL + Sbjct: 62 GAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVHGQNDNPEVRAERKKKQQTLEETT 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY Q L+ +A+ YL+KRGLS EVIA + +G+AP GW + + F P Sbjct: 122 AAAADFYAQQLK--FNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLTQVF--QPYPNT 177 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 +L+D GM++ N +GR YDRFR R+MFPIR+ RG+VIGFGGRVL + PKYLNSP+T +F Sbjct: 178 ALVDTGMVIDN-EGRHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLFD 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGLYE + E R+LVVEGYMDVVALAQ+G+ Y VA+LGT+TTA+H+++L R Sbjct: 237 KGKNLYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMRQ 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE- 359 +++ C+DGD AGR AAWRALE ALP + D + L F+FLP+ DPD+ +R GK FE Sbjct: 297 ADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQFED 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A + Q+ PLS + + L + L+T +G+A L + PL++Q+ L L+Q L + Sbjct: 357 ALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSELV 416 Query: 420 GILDDSQLERLMPKAAESGVSR-----PVPQLKRTTMRIL----IGLLVQNPELATLV-- 468 GI D+ + L +A + V + P +K+ M L I L+ NP+ A + Sbjct: 417 GIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQPVMLTLVQRQIRSLLINPDWAAYIDL 476 Query: 469 PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 P LD + L E + + P T Q+LE+ RG+ T+ ++ Sbjct: 477 PDYLALDGD-FACLANLAESIKNHAAVP--ETAQVLEYMRGSPYEETITRI 524 >UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6WZ17_METML Length = 595 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 241/537 (44%), Positives = 331/537 (61%), Gaps = 27/537 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 18 IPESFIQELLNRVDIVDVIDKSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFGC 77 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG ++ F+M Y L FV+ + +LA M + VP E ++ + + L + L Sbjct: 78 GAHGTSVGFIMEYQGLSFVDAIHDLAKMVGMTVPQEVRDS----DKPAPKVVVGLQEALQ 133 Query: 125 ---TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE-NRQ 180 FY+ L++ + A +YL+ RGLS +V A+F +G+AP GW N+ F P+ + Sbjct: 134 QAANFYKAELKK--SPRAIEYLKARGLSGQVAAKFQVGYAPAGWQNLQSVF---PQYENE 188 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIF 239 +L AG++V N+QGR YDRFR+R+MFPI D++G+VIGFGGRV+ DTPKY NSPET +F Sbjct: 189 ALTVAGLVVENEQGRRYDRFRDRIMFPIHDQKGQVIGFGGRVINPEDTPKYYNSPETPLF 248 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG +LYGL+ A++ + R LVVEGYMDVVALAQYGI YAVA+LGT+TT HI L R Sbjct: 249 QKGHELYGLFLARRAIRDAGRALVVEGYMDVVALAQYGIEYAVAALGTATTPYHITKLTR 308 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + ++ C+DGD AGR AAWRA ALP +TDG +L F+FLP DPD+ VR+ GKE FE Sbjct: 309 QADEIVFCFDGDNAGRTAAWRAAMNALPALTDGLKLSFLFLPKEHDPDSYVREFGKEKFE 368 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A ++ AMPLS ++ L L + + R R A P++ Q+ +YLR+++ +L Sbjct: 369 AEIKSAMPLSQYILQHLSEDNPLQSQEDRVRFLNEAEPIMQQISAPRSAMYLRKKVA-EL 427 Query: 420 GILDDSQLERL--MPKAAESGVSRPVPQLKRTTMRIL--IGL-LVQNPELATLVPPLENL 474 L +++ L +P ++ + + P+L RTTM + GL L+ +PELA LE L Sbjct: 428 AQLSADEMQALLKLPNLNKAPM-KAKPKLTRTTMSLQKRFGLMLLMHPELAQ-EDDLELL 485 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL----EKLSMWDDIAD 527 E L R+++ CL P LL +A L +L++ DD D Sbjct: 486 SERD-DADALLRQVIEICLLHPHSKPAVLLRELESKIDANVLPELQRELTLLDDTLD 541 >UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB92_9GAMM Length = 611 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 226/506 (44%), Positives = 322/506 (63%), Gaps = 27/506 (5%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 FINDL + DIVDLI+ RV LKK GK++ ACCPFHNEKTPSFTV +KQ+YHCFGCG +G Sbjct: 8 FINDLSNQVDIVDLINRRVPLKKAGKDYKACCPFHNEKTPSFTVVADKQYYHCFGCGENG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQLMDGLNTF 126 NAIDF+M +D L F+E VE +A + V ++ + P +++R++ LM ++ F Sbjct: 68 NAIDFVMKFDHLNFIEAVEVVAGESGVSVVYDQNARPVDPKMKRYR-----DLMQEVSEF 122 Query: 127 YQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 YQ L++ P Y + RGL+ E+ RF +GFAPPGW ++ F N E + L + Sbjct: 123 YQSQLKKSPAKKKVVTYAKNRGLTGEIAKRFDLGFAPPGWSSLFDHFKHNLEVVKDLEEM 182 Query: 186 GMLVTNDQ--GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKG 242 G+LV + G YDRFR+R+MFPI + +G +I FGGRVL D PKYLNSPET IFHK Sbjct: 183 GLLVAKKEKKGEYYDRFRDRLMFPIHNAKGDIIAFGGRVLSEEDKPKYLNSPETPIFHKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R+LYGL+ A++ + + +LVVEGYMDVVAL Q GI VA+LGT+TT +H+Q L R T+ Sbjct: 243 RELYGLHHARKHSRSIDYILVVEGYMDVVALHQSGITCTVATLGTATTPEHLQTLSRTTD 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +I C+DGDRAGR AAW+AL+ ALP + G ++F+FLPDGEDPDTLV+KE +AFEAR+ Sbjct: 303 TIIFCFDGDRAGRAAAWKALQIALPVIKSGLIVKFLFLPDGEDPDTLVKKESSKAFEARI 362 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 E++ PLS FLF+ + +VD T +G+ LI QV +T + L + + ++G Sbjct: 363 EKSHPLSKFLFDHIKVEVDFDTIEGKTLFLEKVSILIQQVEYDTYQQQLIEGVAQEVG-Q 421 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELA-----TLVPPLENLDEN 477 Q++R++ + + +P LK +T ++G + P+ +L P+ + N Sbjct: 422 SVEQVKRVLSQ-------QKLPPLKPSTPAPIVGEEMPVPDFPDFPDFSLSKPIVVKNNN 474 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQL 503 GL +++ L+ P L+ G + Sbjct: 475 ---AKGLMSKMITLLLNYPSLSDGTV 497 >UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC Length = 597 Score = 430 bits (1105), Expect = e-119, Method: Compositional matrix adjust. Identities = 250/599 (41%), Positives = 348/599 (58%), Gaps = 41/599 (6%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + FI +LL R DIVD++ +KLKK G NF ACCPFHNEKTPSFTVN KQFYHCFGC Sbjct: 2 IAQPFIQELLDRIDIVDIVARHLKLKKAGANFTACCPFHNEKTPSFTVNSSKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF-------EAGSGPSQIER------- 110 G HGNAI+FLM + + FVE VE LAA +++P + SG + + Sbjct: 62 GRHGNAINFLMEHSGVSFVEAVESLAAHAGMQIPAWKNINSKASDSGETSLNEVRFDEVI 121 Query: 111 HQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLK 170 LY M+ FY+ L+Q + A YL+ RG+S + F IG+AP GW N+ + Sbjct: 122 QTSSDLYGRMEQAAKFYRVQLKQ--SELAIAYLKDRGVSGQTALHFGIGYAPSGWQNLAE 179 Query: 171 RFGGNP--ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP 228 F P ++ +L+ +G++V ++ ++YDRFR R+MFPI D + R+IGFGGR L P Sbjct: 180 IFTDYPSGDSSHALVRSGLIVAHESKKNYDRFRHRIMFPILDLKKRIIGFGGRALDGSEP 239 Query: 229 KYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTS 288 KYLNSPET +F KGR+LY L A + R++VVEGYMDVV L Q+GI VA+LGT+ Sbjct: 240 KYLNSPETPLFIKGRELYNLVSAGPAIRKSGRVVVVEGYMDVVMLVQHGIENVVATLGTA 299 Query: 289 TTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDT 348 TT+ HIQ L R T+ V+ C+DGD AG AAWRALET+LP + DG+ ++F+FLPD EDPD+ Sbjct: 300 TTSTHIQKLLRYTDEVVFCFDGDEAGTKAAWRALETSLPQLKDGKDIKFLFLPDKEDPDS 359 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 +RK GK+AF+ +E+A LS F L +V+LST +GRARL A PL+ Q+ Sbjct: 360 YIRKYGKDAFKNLLEKAQLLSVFFCKELSSRVNLSTSEGRARLVQQAEPLLVQINAPIFG 419 Query: 409 IYLRQELGNKLGILDDSQL-------ERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQN 461 L + + G+ D +QL ++ P + S VSRP L T R LI +L+ Sbjct: 420 FMLMKRISELAGV-DQNQLIAFLKPGKKNQPSISRSNVSRP---LSVTPYRRLIQILLHT 475 Query: 462 PELA-TLVPPLENLDENKLPGLGLFRELVN-----TCLSQPGLTTGQLLEHYRGTNNAAT 515 P L L L++ + L LV+ +C S L + ++ H T + Sbjct: 476 PAYVDKLDTDLFALNDGQNEEKALLAALVDFLKTSSCTSMDELNSVAIMLHLDQTPHRVL 535 Query: 516 LEKLSMWDDIADKNI---AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 LEK++ DI K++ + FT ++ + ++ + R EL R L+ EE+ EL Sbjct: 536 LEKIAR--DIHVKDVDWDIDAEFTGAMVRLREAQRKSRVAELHNRPLA-SLTPEEKKEL 591 >UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P264_AZOSE Length = 609 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 251/602 (41%), Positives = 350/602 (58%), Gaps = 42/602 (6%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI DLLAR DIVD+I+ + LKK G N+ ACCPFH EK+PSF+V+ KQFYHCFGC Sbjct: 2 IPQSFIQDLLARVDIVDVIERHLPLKKGGANYFACCPFHGEKSPSFSVSPTKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+A+ FLM Y L FVE V+ELAA L+VP E G P + L + M Sbjct: 62 GAHGSAVGFLMEYSGLPFVEAVKELAAQAGLQVPQERGPNPRNDKNPAHAALIEAMTVAA 121 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE-NRQSLI 183 Y+ L+Q A++A YL++RG+S E+ ARF IG+AP W + F P+ + ++L+ Sbjct: 122 RHYRDQLRQ--ASAAIDYLKRRGVSGEIAARFGIGYAPDDWQGLRSIF---PDYDAKALL 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +AG+++ N+ GR YDRFR R++FPI+D+RGRVI FGGRVL + PKYLNSPET +F KGR Sbjct: 177 EAGLVIENEAGRRYDRFRNRIVFPIQDRRGRVIAFGGRVLDSGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL +AQ+ + +VVEGYMDVVALAQ+GI +VA+LGT+TT HI +L R + Sbjct: 237 ELYGLLQAQKSIRDAGHAIVVEGYMDVVALAQHGIGNSVATLGTATTTHHINVLLRQSQR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AA RALE++L + D L F+FLP+ DPD+ VR G +AF Sbjct: 297 IVFCFDGDAAGRKAARRALESSLEALRDDVTLAFLFLPEQHDPDSFVRAHGADAFRQAAG 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A L+ FL L L T +GRARL A PL++++ LR+ + + + Sbjct: 357 AATTLTNFLLRELQSNCALDTAEGRARLVHEAKPLVTRITAPMLRLQIVKSIAEACQ-FS 415 Query: 424 DSQLERLMPKAAESGVSRP--------------------VPQLK-----RTTMRILIGLL 458 S++ER +E G RP P ++ +T+ L+ L+ Sbjct: 416 QSEIERAY-GLSEEGRERPGEHAAAGPHHHPAAAPPRRLTPGMRPRRKPPSTVGTLLRLV 474 Query: 459 VQNPELATLVP----PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 +Q+P LA +P P N + L + + NT + G L+E +R T + Sbjct: 475 LQHPALAARLPVDLVPTMNAEGEALVAI---IDATNTGDLAANVGLGALVERFRETPHGE 531 Query: 515 TLEKLS--MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELW 572 TL K + + D D+ + E F D+L + + + L ARER GLS+ ER L Sbjct: 532 TLAKTAGELVDAEFDEAVVEVLFEDTLRKLHADTIAREIDGLTARERESGLSSIERHRLA 591 Query: 573 TL 574 L Sbjct: 592 AL 593 >UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV Length = 583 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 243/584 (41%), Positives = 342/584 (58%), Gaps = 20/584 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ F+ DLL R D+ +LI +R+ LKK G N+ ACCPFH+EKTPSF V +K FYH Sbjct: 1 MSGLIPQRFVEDLLDRIDLAELIGSRITLKKAGANYKACCPFHDEKTPSFNVRPDKGFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F+ ++ L F E VEELA LEVP++ + + E Q +TL + Sbjct: 61 CFGCGAHGDAISFVREFEGLGFTEAVEELAKRAGLEVPYDRAA---KQEMQQARTLTDAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + N FY +L AR YL++RGL +I ++ IGFAP G L + P++ + Sbjct: 118 EFANRFYHSALTSQQGGYARDYLKQRGLDENIIQQYQIGFAP-GTGTAL--YDAAPKDLK 174 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 + + V++ GR D FR RVMFPIR+ RG+ I FGGR LG+D KY+NSPE+D+FH Sbjct: 175 APLIETRTVSDQYGRPRDLFRNRVMFPIRNTRGKTIAFGGRTLGDDKAKYINSPESDVFH 234 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R++YGL+EA+Q + ++LLVVEGYMDV+ALAQ+GI+YAVA+LGT+T D + L R Sbjct: 235 KSREIYGLFEARQAIRQLDKLLVVEGYMDVIALAQHGIHYAVATLGTATNQDSLTALLRH 294 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 +++ C+DGD+AG AA RA+E AL M DG L+F+ LP+GEDPDTLVRKEG +AF+ Sbjct: 295 VRHIVFCFDGDQAGFRAADRAMENALELMADGLHLQFLMLPEGEDPDTLVRKEGPDAFQK 354 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL----G 416 R+E A P S +LF+ +DL P+ R L PL++++P TLR + E+ G Sbjct: 355 RIEGATPFSRYLFDRQSEGLDLQLPEHRGELRARVEPLLNKMPRSTLRDAMWHEMLRLCG 414 Query: 417 NKLGILDDSQLERLMPKAAES-GVSRPVPQ---LKRTTMRILIGLLVQNPELATLVPPLE 472 + + Q + G SRP + +K + L L++ PELAT V L Sbjct: 415 GRNQWQNRQQGRNYKARGWRGEGQSRPTEERIDVKLSKDSTLCLALLEAPELATEVKALA 474 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + +L G F L + + T + L TN A +++D++ E Sbjct: 475 D-STRQLERAGRF----ARWLLEEKIQTRKTLVAGLATNKQARDRFYNLFDELEHIPARE 529 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHG-LSNEERLELWTLN 575 T + + + RQ+ L R LS EER EL TL+ Sbjct: 530 STLAAARELLSPNEEAARQQRLATLLRNLAQLSPEEREELRTLS 573 >UniRef50_Q058D3 DNA primase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q058D3_BUCCC Length = 590 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 212/576 (36%), Positives = 357/576 (61%), Gaps = 3/576 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +IP+ FI++++ +T+I+++I+ + LKK G N+ CPFH EKTPSFTVN EKQF++CFG Sbjct: 8 KIPQEFIHEIIEKTNIIEIINRYITLKKTGNNYKTLCPFHYEKTPSFTVNSEKQFFYCFG 67 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG HGN IDFLM Y+KL+F+ ++ EL ++H +++P+ + + + ++ +Y+++ Sbjct: 68 CGIHGNVIDFLMQYEKLDFLSSINELTSLHGIKIPYIQYNSQFKKKFFYKKKIYKILKKT 127 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + Y ++L + V A YL KRG++ +++ F++G+A + N ++I Sbjct: 128 SKIYIKNLFK-VPNQAYNYLIKRGITSKIMKNFSLGYALSNNYQITNFIKKKTTNISTII 186 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKG 242 D G+ + DRF+ER++FPI++K G + GFGGR++ + PKYLNSPET F K Sbjct: 187 DCGLSIYEKNKIKQDRFKERIIFPIKNKYGIIKGFGGRIINQYNYPKYLNSPETITFFKK 246 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + LYG+YE N +P ++LVVEGY DV++LAQ INY++A LGT+ T I+ +F+ + Sbjct: 247 KNLYGIYELILKNPKPKKILVVEGYFDVISLAQKNINYSIALLGTNITTYQIKKIFQISK 306 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +I C+DGD+AGR A+W++L LP++ D + F+ LP EDP +L+ KEGK+ FE R+ Sbjct: 307 KIIFCFDGDKAGRIASWKSLNLILPFLYDEYIINFLLLPKNEDPSSLIIKEGKKKFEKRI 366 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 +++ +F F + +++LS + +LS + +PLI ++P + ++IYLR+ LGNK+GIL Sbjct: 367 KKSESFYSFFFKKVTNKINLSCINDCIKLSRITIPLIKKIPSKIIKIYLRKILGNKIGIL 426 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGL 482 D QL++L+ + + + +K TTMR+LI L++Q P+L + ++ + + + G Sbjct: 427 DSYQLKKLI-QFQKEKKKKINKPVKITTMRLLISLIIQYPKLVKKIKNIKKIKKLHIQGK 485 Query: 483 GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 + +L+ + TG LLE +R + + LS W+ I K TF + LN+ Sbjct: 486 KILIKLIELIKKKKIFKTGYLLEFFRFSKLGKIFKYLSTWNHIILKKKIFFTFKEFLNNF 545 Query: 543 FDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 LE + +LI ER G E+ ++W ++++L Sbjct: 546 KQQHLEYKYNKLITIERKKGFDVNEKKKIWNISKKL 581 >UniRef50_B5JTS5 DNA primase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTS5_9GAMM Length = 506 Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust. Identities = 225/495 (45%), Positives = 301/495 (60%), Gaps = 19/495 (3%) Query: 75 MNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQP 134 M YD LEF E +EELA LEVP E +G Q +R Q LY LM + YQ L++ Sbjct: 1 MEYDNLEFPEAIEELARTLGLEVPREESAGQQQ-QRRQSADLYDLMQQASLHYQSELKR- 58 Query: 135 VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG 194 + A YL++RGLS + IGF P WD ++KR G N +Q L AGML+ ND G Sbjct: 59 -HSQAIDYLKQRGLSGSTAKDYGIGFVPESWDYLIKRLGKNDRTQQQLESAGMLIRNDSG 117 Query: 195 RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQD 254 R YDRFR R+MFPIRD RG+ I FGGRV+G PKYLNSPET IFHKGR+LYGLYEA++ Sbjct: 118 RIYDRFRNRIMFPIRDPRGKTIAFGGRVMGEGEPKYLNSPETPIFHKGRELYGLYEAKRH 177 Query: 255 NAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAG 314 N +++VVEGYMDVV LAQ+G+ YAVASLGT+ TADHIQ LFR ++V+ C+DGDRAG Sbjct: 178 NKTLEKIVVVEGYMDVVMLAQHGVRYAVASLGTACTADHIQRLFRLVDDVLFCFDGDRAG 237 Query: 315 RDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-EQAMPLSAFLF 373 RDAAWRAL LP + +G+Q+RF+FLP+GEDPD++V+ EGKEAFE R+ +Q+ PLS +L Sbjct: 238 RDAAWRALNNCLPALQNGKQVRFLFLPEGEDPDSMVQSEGKEAFEQRLAQQSQPLSEYLI 297 Query: 374 NSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL-----GILDDSQLE 428 + L Q D + DG +R + LA PL+ Q+ +T + L +EL + + L Sbjct: 298 DRLKAQCDTQSIDGISRYAALAKPLLEQIQADTFKRLLTEELARAVQRPVDQLFGQGGLN 357 Query: 429 RLMPKAAESGVSR-PVPQLKRTTMRILIGLLVQNPELATLVPP-----LENLDENKLPGL 482 P + + P QL T R++I L+ P LA V + +LDE +P Sbjct: 358 APPPTQGNTTQKKPPKAQLSITPPRLVIAALLAQPSLAQTVTDEDLALVASLDERAVP-- 415 Query: 483 GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 EL P L T LL+ YR T + L +L+ ++ A IA + F D+ +++ Sbjct: 416 -FILELFQLLQQHPQLNTAALLDRYRDTPFDSALMELASYEFQAADKIAIE-FQDAFSNL 473 Query: 543 FDSLLELRQEELIAR 557 + R++ LI R Sbjct: 474 LKRARKQRRQTLIQR 488 >UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRS5_9GAMM Length = 594 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 240/607 (39%), Positives = 340/607 (56%), Gaps = 44/607 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI++LL R+DIV++I RV LKK G+ F ACCPFH EKTPSF V+ +KQFYH Sbjct: 1 MAGLIPQAFIDELLERSDIVEVIQRRVSLKKAGREFAACCPFHGEKTPSFYVSPQKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM Y+ L F E VE+LA LEVP EAG G + E H LY+ + Sbjct: 61 CFGCGAHGTAISFLMEYENLSFPEAVEQLAEQAGLEVPREAG-GDDKREAHA--PLYEAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPP-GWDNVLK-RFGGNPEN 178 + +Y Q L+Q A +YL+ RG+ + IG+APP G L+ RF + Sbjct: 118 NAAAEYYVQQLRQ--TPKAVEYLKNRGIDGNTARDYQIGWAPPSGLIEALQPRF-----S 170 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q L+DAG+ D G +RFR R+MFPIRD+RGR+ GFGGR++ + PKYLNSPE+++ Sbjct: 171 PQQLVDAGLAARRDDGGIRERFRARIMFPIRDRRGRITGFGGRLIEDGEPKYLNSPESEV 230 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG+ +YGL+EA++ + ++VVEGYMDVV LA+ G AVA +GT+ T H+ LF Sbjct: 231 FHKGQTIYGLFEARKAGTRLDDIVVVEGYMDVVGLARAGFRRAVACMGTALTRAHLDSLF 290 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + + C+DGD AGR AAWR+L ALP + R++R +FLP+G+DPD+LV ++G + Sbjct: 291 RQVSRITLCFDGDAAGRRAAWRSLAEALPAIQGLREVRVLFLPEGDDPDSLVLRDGLAGW 350 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL------- 411 E R+ A+PLS L L + T +GR R + A+ L++ R L Sbjct: 351 EGRLAAALPLSETLVRLLREEHPTDTAEGRTRFAHAAMKLVATTRDPLFRDQLVERVAQE 410 Query: 412 ----RQELGNKLGILDDSQLERLMPKAAESGV-----SRPVPQLKRTTMRI---LIGLLV 459 + LG +L +D + P + S + + P + T + L+ ++ Sbjct: 411 THLSPERLGEQLREAEDGNVRATGPASGPSDIPEAPSAEPAGAARETPSALWGALLARIL 470 Query: 460 QNPELATLVPPLENLDENKLPGLG--LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 Q+PEL L +L PG +L+ +PG ++ LLE +R + L+ Sbjct: 471 QHPELEWSQSELADL--TAFPGTAAQTLGKLLEALQERPGCSSAHLLERFRDDRHFNRLQ 528 Query: 518 KLSMWD-DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTH---GLSNEERLELWT 573 L+ + D + +Q D + L+Q RE T GL+ E+R EL Sbjct: 529 ALAARELGDGDPKVTQQVAMDCARQLL-----LQQARTRIRELTRADGGLATEQREELAR 583 Query: 574 LNQELAK 580 L L K Sbjct: 584 LTALLQK 590 >UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7_METFK Length = 576 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 247/582 (42%), Positives = 334/582 (57%), Gaps = 29/582 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 2 IPDSFIQELLNRVDIVDVIDRSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGL 123 GAHG+AI F+M Y + FVE V ELA + VP E S P + R + L ++M Sbjct: 62 GAHGSAIGFVMEYQGISFVEAVHELAKSVGMIVPQE--SRPEDVVRAKVIPGLQEVMQQA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y+ L++ + A +YL+ RGLS +V RF IG+AP GW N+ F + L Sbjct: 120 ADYYRAELKK--SPRAIEYLKGRGLSGQVAGRFQIGYAPAGWQNLQAVFADY--RHEVLQ 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFHK 241 AG+++ N+QGR YDRFR+R+MFPI ++G+VIGFGGRVL + KYLNSPET +F K Sbjct: 176 TAGLVIENEQGRCYDRFRDRIMFPIHGQKGQVIGFGGRVLESADAGAKYLNSPETPLFQK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G++LYGL+ A++ E R LVVEGYMDVVALAQYGI+YAVA+LGT+TT HI L R T Sbjct: 236 GQELYGLFLARRAIREAGRALVVEGYMDVVALAQYGIDYAVAALGTATTPAHIAKLMRQT 295 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + ++ C+DGD AGR AAWRA ALP + DG +L F+FLP DPD+ VR+ GK+AFE Sbjct: 296 DEIVFCFDGDSAGRGAAWRAAMNALPVLKDGLRLSFLFLPAQHDPDSYVREFGKQAFEDL 355 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 M QAMPLS +L L L + + + + A P++ Q+ L + LR+ + I Sbjct: 356 MAQAMPLSQYLIQELSANNRLQSQEDKVQFLNEAEPILKQIQAPRLALLLRKRIAELADI 415 Query: 422 LDDSQLERLMPKAAESG--VSRPVPQLKRTTM---RILIGLLVQNPELATLVPPLENLDE 476 D R M K E+ +R P+ R TM R + + P L ++ D+ Sbjct: 416 SSDEM--RRMVKLPETNRQQTRSAPKQARVTMSLQRRFTLMAIMRPHL------VQEGDQ 467 Query: 477 NKLPGLG----LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA- 531 + G + R++V L P +L NA L L + D+++ Sbjct: 468 QWMTGSTDEDEMVRQVVKLALESPDAKPVAILHGLESVVNARLLPDLQRDLHLLDESLDF 527 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLS--NEERLEL 571 E F + D L+ ++ + R + LS EE EL Sbjct: 528 ELEFDGVRRQLKDMYLQRQKASAVDRLKEKNLSQLTEEEREL 569 >UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6J0_LEPCP Length = 598 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 208/421 (49%), Positives = 272/421 (64%), Gaps = 14/421 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI DLLAR DIV ++ V+LKK G N+ CPFH EK+PSFTV+ KQFYHCFGC Sbjct: 2 IPQGFIQDLLARADIVAVVGRSVQLKKTGANYSGLCPFHAEKSPSFTVSATKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-----RHQRQTLYQL 119 GA+GNAI FLM + FV+ V ELA VP E + P Q E R Q+ TL +L Sbjct: 62 GANGNAIGFLMEASGMTFVDAVHELAQEVGATVP-EENTSPEQREKAAQARAQQLTLTEL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 Y++ L+ + A YL++RGL+ E+ ARF +G+APPG + F + Sbjct: 121 QAQAAAHYRKQLK--ASPKAIDYLKRRGLTGEIAARFGLGYAPPGHHGLASAFARY--DD 176 Query: 180 QSLIDAGMLVTNDQG---RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 L+++G+++ D+G R +DRFR+R+MFPIR+ +G +IGFGGRVL + PKYLNSPET Sbjct: 177 PLLVESGLVIL-DEGQDQRRHDRFRDRIMFPIRNVKGEIIGFGGRVLDDSKPKYLNSPET 235 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F KG +LYGLYEA+Q + +LV EGYMDVVALAQ G + AVA+LGT+ TADH+Q Sbjct: 236 PVFVKGHELYGLYEARQAIRQRGHVLVTEGYMDVVALAQLGFDQAVATLGTACTADHVQK 295 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R T+ V+ +DGD AGR AA RA+E LP+ TD R RF+FLP DPD+ VR EG E Sbjct: 296 LVRHTDQVVFSFDGDNAGRRAAMRAMEAVLPFATDTRSFRFLFLPAEHDPDSYVRAEGAE 355 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AFE R+ +A+PLS+ + DL TP+GRARL A PL +P LR+ + E Sbjct: 356 AFERRIAEALPLSSQMLQVAGADCDLVTPEGRARLVAQAEPLWRALPAGVLRMQMVNEFA 415 Query: 417 N 417 Sbjct: 416 Q 416 >UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXZ5_HALNC Length = 559 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/467 (43%), Positives = 300/467 (64%), Gaps = 22/467 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI+D+LARTD+V+LI A+V LKK+GK + ACCPFH EKTPSF VN +KQFYHCFGC Sbjct: 7 IPESFIDDVLARTDLVELIHAQVPLKKKGKEYAACCPFHQEKTPSFYVNPDKQFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL- 123 GAHGNA+ FLM+Y+ +F +EELA + +P S+++ + ++D + Sbjct: 67 GAHGNAVSFLMDYEHRDFRGAIEELATRAGMTLPV------SEVDHKALEEQAAMLDSMS 120 Query: 124 --NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 N +++ L+ A YL++RG++ A F +GFAP G + +L P+ R Sbjct: 121 FANAHFKRQLR--AHQEAIDYLKQRGVNGTTAALFDLGFAPNG-NLLLGHCESPPKMRDE 177 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 L++ G++V D G YDRFR R+MFPIRDKRG++IGFGGR+LG PKYLNSPE+ +FHK Sbjct: 178 LLELGLIVQKDDGEQYDRFRRRIMFPIRDKRGQIIGFGGRILGPGEPKYLNSPESRLFHK 237 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G+ LYGLYEA+ D+A P R+++VEGYMDVV LAQ+G+ VA++GT+TT + Q L+R + Sbjct: 238 GQNLYGLYEARLDDARPARVIIVEGYMDVVMLAQHGVRNVVATMGTATTDEQTQSLYRFS 297 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 +++ C+DGD AGR AA +AL ALP++TDGR LRF+FLPDGEDPD+ ++ +GK AF + Sbjct: 298 PSLVFCFDGDAAGRRAATKALHAALPHLTDGRDLRFLFLPDGEDPDSFIQAKGKSAFIEQ 357 Query: 362 ME-QAMPLSAF---LFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +E ++ F L + + P D + A+ S L I +P L+ ++ + Sbjct: 358 IEHHSLSFDNFILQLLDQMEPGQDTA---AMAKKSKLGNDWIRTLPDGALKRITQRRINE 414 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPEL 464 G+ + + P ++P K+T +++ +++++P+L Sbjct: 415 HTGVWRAAYKKNTGPTEPTLPRNKPQSYAKQT---LILSIVLKHPDL 458 >UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA Length = 800 Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust. Identities = 242/545 (44%), Positives = 321/545 (58%), Gaps = 39/545 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP F+ DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 177 IPHSFLQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 236 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG------------SGPSQIERHQ 112 GAHG AI FLM + L F E V+ELA L VP E P+ + + Sbjct: 237 GAHGTAIGFLMEHAGLTFPEAVQELAQSVGLTVPHEPSMRGGGGGGGGGGDYPAPVSKSV 296 Query: 113 RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L M +Y++ L+ AT A QYL+ RGL+ E+ ARF +G+AP GW N+ F Sbjct: 297 ATALSDAMTAACDYYRKQLRG--ATVAIQYLKNRGLTGEIAARFGLGYAPDGWQNLEAAF 354 Query: 173 GGNPENR-QSLIDAGMLV----TNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGN 225 P+ R +SL++AG+++ T+ QG R YDRFRER+MFPIR+ +G+VIGFGGRVLG+ Sbjct: 355 ---PDYRDESLVEAGLVIVSEKTDAQGVARRYDRFRERIMFPIRNVKGQVIGFGGRVLGS 411 Query: 226 DTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASL 285 PKYLNSPET +F+KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+L Sbjct: 412 GEPKYLNSPETPLFNKGSELYGLFEARLAIRERKYVLVVEGYMDVVALAQLGFPNAVATL 471 Query: 286 GTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGED 345 GT+ T H+Q L R T+ VI +DGD AGR AA RALE LP+ D R +RF+FLP D Sbjct: 472 GTACTPIHVQKLLRQTDTVIFSFDGDSAGRRAARRALEACLPHAGDNRTIRFLFLPTEHD 531 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD+ VR+ G EAF ++E+AMPLS FL N + L P+GRA+ A PL+ +P Sbjct: 532 PDSYVREFGAEAFSEQVERAMPLSQFLLNEAIAGKALDQPEGRAKALFDAKPLLQALPAN 591 Query: 406 TLRIYLRQELGNKLGI-------LDDSQLERLMP--KAAESGVSRPVPQLKRTTMRILIG 456 LR + ++L I L D P +A R V ++ +R Sbjct: 592 ALRAQIMHMFADRLDIPFEEVAALSDVDTRIATPPRQAPARSERRRVTDSEKRALRT--- 648 Query: 457 LLVQNPELATLVPPLENLDENKLPGLG-LFRELVNTCLSQPGLTTGQLLEHY-RGTNNAA 514 LV +P +A+ + + LP +G LF E+V+ + +LL R ++N A Sbjct: 649 -LVMHPRIASQLDDEQIATLRALPRIGELFAEVVDHARALGDGAEFRLLSDVLRTSSNGA 707 Query: 515 TLEKL 519 T E++ Sbjct: 708 TYEEI 712 >UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47IP7_DECAR Length = 578 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 233/546 (42%), Positives = 330/546 (60%), Gaps = 20/546 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI DLLAR DIVDL+D V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 2 IPDSFIQDLLARVDIVDLVDGYVPLKKAGANYAACCPFHNEKSPSFTVSPTKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG AI F+M Y L FV+ V++LA ++VP G + Q +TL ++M Sbjct: 62 GAHGTAISFVMEYQGLGFVDAVKDLATRAGMQVPESEGRSFKDEKPGQTRTLIEIMARAA 121 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE-NRQSLI 183 +Y+ L++ + A +Y +KRGL+ E+ AR+ IG+AP GW N+ + F P+ N L Sbjct: 122 AYYKDQLKK--SPHAIEYCKKRGLTGEIAARYGIGYAPDGWQNLQEVF---PDYNADELK 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+++ N+ GR YDRFR+R+M PI + +G +I FGGR++ PKYLNSPET +F KGR Sbjct: 177 IAGLVIENEAGRRYDRFRDRLMIPIINPKGEIIAFGGRIIDQGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +L+GL +A+Q E + +V EGYMDV+ALAQ G+ AVA+LGT+TTA H+ L R + Sbjct: 237 ELFGLPQARQALRETDTAIVTEGYMDVIALAQNGVGNAVATLGTATTATHVTKLLRQVDR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE +L + D ++L F+FLP DPD+ +R+ GKE F+ ++ Sbjct: 297 IVFCFDGDNAGRKAAWRALENSLEALADNKRLGFIFLPQEHDPDSYIREFGKEQFDRQVT 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QAMPLS FL L + DL++ +G+A+L A PL+ ++P LR+ L + L G Sbjct: 357 QAMPLSDFLLRELAQRCDLTSSEGKAQLIYEAKPLLLKLPTPLLRLQLVKRLAEASGFA- 415 Query: 424 DSQLERLM-----PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 +++ERL AA R P L R +RI++ P+LA +P D + Sbjct: 416 QAEVERLCELKSYTPAAPPKAKRTAPSLTRNLLRIVL----HKPQLAAQLPIALLPDTPE 471 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS--MWDDIADKNIAEQTFT 536 L +LV ++ + L E RG + +E + + D+ AE F Sbjct: 472 RAALTRLHQLVTA--NRETSSYAGLREQLRGLPEESVIENAASELLGLPFDEEGAEMEFR 529 Query: 537 DSLNHM 542 D+L + Sbjct: 530 DTLEKL 535 >UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA1_THASP Length = 631 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 243/625 (38%), Positives = 348/625 (55%), Gaps = 66/625 (10%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ F+ +LL+R DIVD+I+ + LKK G N+ ACCPFH EK+ SF+V+ KQFYHCFGC Sbjct: 2 IPQSFVQELLSRVDIVDVIERYLPLKKSGANYFACCPFHGEKSASFSVSPSKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G HG+A+ FLM Y L FV+ ++ELAA L+VP + G + + + LY+ M Sbjct: 62 GVHGSAVGFLMEYSGLGFVDAIKELAAQVGLQVP-DDGRSAAPVHDDPSERLYEAMAVAA 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR-QSLI 183 FY+ L+ + A YL++RGLS EV ARF +G+AP W + K F P+ + ++L Sbjct: 121 RFYRDQLKP--SRQAIDYLKRRGLSGEVAARFGLGYAPDEWQALEKAF---PDYQAKTLA 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 DAG+++ N+QGR YDRFR R++FPI D+RGR+I FGGRVL PKYLNSPET +F KGR Sbjct: 176 DAGLVIDNEQGRRYDRFRNRIIFPIHDRRGRIIAFGGRVLDKGEPKYLNSPETPLFEKGR 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL+ AQ+ + +VVEGYMDVVALAQ+ I AVA+LGT+TT HI L R T+ Sbjct: 236 ELYGLFLAQKAIRDAGFAVVVEGYMDVVALAQFAIENAVATLGTATTPQHIHTLLRQTDR 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE AL + D L F+FLP DPD+ VR EG EAF Sbjct: 296 IVFCFDGDAAGRRAAWRALENALESLRDDATLAFLFLPAEHDPDSFVRAEGTEAFRKAAL 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A PL +FL L + L + +GRA A PL++++ L++ + + + G + Sbjct: 356 AATPLGSFLIQELSGRHPLDSAEGRAAFVHEAAPLVTRIAAPLLKLQVVKAVAESAG-MT 414 Query: 424 DSQLERLMPKAAESG--------------------------------------------V 439 ++E + A S Sbjct: 415 QGEVEYAFEQLAASAPRRRGASAPTPPRAPAASIASTEADAPFFDDAPPPARSAPPRGQA 474 Query: 440 SRPVPQLKR---TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC-LSQ 495 RP +R +T L+ L++Q+P A + P+ + ++ GL L +++ C L + Sbjct: 475 PRPRAGGRRKPPSTAGTLLRLVMQHPTWAARM-PVGLVPDDSPEGLALI-AIIDLCSLGE 532 Query: 496 P----GLTTGQLLEHYRGTNNAATLEKLS--MWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 P GL G L+E +R T +A TL +++ + + D+ + E F D+L + + Sbjct: 533 PIPSGGL--GALIERFRETPHAETLSRVAAELVEAEFDEAVVETLFEDALRKLQIDGVGK 590 Query: 550 RQEELIARERTHGLSNEERLELWTL 574 L+ R+R GL R L L Sbjct: 591 EITALLQRDREQGLDAAGRHRLGEL 615 >UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_COMTE Length = 688 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/446 (46%), Positives = 283/446 (63%), Gaps = 16/446 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI +LL+R D+VD++ V+LKK G NF CPFH+EK+PSFTV+ KQF+HCFGC Sbjct: 30 IPQSFIQELLSRVDVVDIVGRYVQLKKGGANFMGLCPFHSEKSPSFTVSPSKQFFHCFGC 89 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE----AGSGPSQIERHQRQTLYQLM 120 G +GNAI FLM + + FVE V+ELA L+VP + A ++ + +TL L+ Sbjct: 90 GKNGNAIGFLMEHAGMGFVEAVQELANQCGLQVPQDDISPAERQRQAQQKQKAETLSDLL 149 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG--GNPEN 178 + Y++ L+ A A +YL+KRG+S EV RF +G+AP GW + F NP+ Sbjct: 150 EKAGESYRKQLK--AAPKAIEYLKKRGVSGEVSKRFGLGYAPAGWHGLASVFAEYDNPQ- 206 Query: 179 RQSLIDAGM-LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 L + G+ +V D R YDRFR+R+MFPIR+ +G IGFGGRV G++ PKYLNSPET Sbjct: 207 ---LEECGLVIVGEDDSRRYDRFRDRLMFPIRNVKGEYIGFGGRVFGDEKPKYLNSPETP 263 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKGR+LYGLYEA+Q + LV EGYMDVVALAQ G A+A+LGT+ T +H+Q L Sbjct: 264 VFHKGRELYGLYEARQALRDMGYALVTEGYMDVVALAQLGFANALATLGTACTPEHVQKL 323 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR T+ V+ +DGD AGR AA +AL+ ALP TD R ++F+FLP DPD+ +R+ G EA Sbjct: 324 FRFTDAVVFSFDGDGAGRRAARKALDAALPLATDTRSIKFLFLPSEHDPDSFIREFGPEA 383 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F + A PLS FL S DL +GRA +++ A PL S +P L+ L E+ Sbjct: 384 FSRYVGDATPLSRFLIESASEGCDLGQTEGRAHMASNARPLWSLLPDGALKRQLLSEIA- 442 Query: 418 KLGILDDSQLERLMPKAAESGVSRPV 443 L LD L + A E+ + P+ Sbjct: 443 ALAQLDSRDLSDIW--AQEAARTAPI 466 >UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius RepID=B1XVY9_POLNS Length = 652 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 197/420 (46%), Positives = 274/420 (65%), Gaps = 10/420 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI DLL R DIVD++ VKLKK G NF CPFH+EK+ SF+V+ KQFYHCFGC Sbjct: 4 IPQSFIADLLNRVDIVDVVGQHVKLKKAGANFQGLCPFHSEKSSSFSVSPTKQFYHCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI FLM Y L +V+ +E+LA L+VP E + + Q L ++M Sbjct: 64 GAHGSAISFLMEYSGLGYVDAIEDLARSAGLDVPREERTANDVARQQQAMALSEVMSSAA 123 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG--NPENRQSL 182 +Y+Q L+ T A +YL+ RGL+ E+ R+A+G+AP GW + FG N E ++L Sbjct: 124 DWYRQQLKG--NTRAVEYLKGRGLTGEIAKRYALGYAPDGWQGLETVFGAYSNDEVAKTL 181 Query: 183 IDAGMLVTNDQG------RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 +++G+L+ ++Q + YDRFR+R+MFPIR+ +G+ IGFGGR+L PKYLNSPET Sbjct: 182 LESGLLIQSEQAEGSQSMKRYDRFRDRIMFPIRNPKGQTIGFGGRILDQGEPKYLNSPET 241 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F KG LYGL+EA+Q +LV EGYMDVVALAQ G AVA+LGT+ TA+H+++ Sbjct: 242 PLFSKGNTLYGLFEARQAIRAQEYVLVCEGYMDVVALAQLGFPNAVATLGTACTANHVRM 301 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R T+ V+ +DGD AG+ AA RALE LP M+D +++ F+FLP DPD+ VR G Sbjct: 302 LLRQTDKVVFSFDGDSAGQRAAQRALEACLPLMSDDKEIHFLFLPTEHDPDSYVRAYGAP 361 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AFE +++A +S+F F + +L+TP+GRA A PL+ +P LR + +EL Sbjct: 362 AFEKVIKEATSISSFFFKVVSEGHELTTPEGRAHTHHAAKPLLLSMPPIALRTQILRELA 421 >UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7_RALEJ Length = 604 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/483 (46%), Positives = 300/483 (62%), Gaps = 25/483 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 2 IPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI FLM Y + E V ELA + VP E P Q+ L D ++ Sbjct: 62 GAHGSAIGFLMEYSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAMS 121 Query: 125 ---TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY++ L+ A A QYL+ RGL+ E+ A+F +G+AP W + FG ++ + Sbjct: 122 RATEFYRRQLRG--APQAIQYLKGRGLTGEIAAQFGLGYAPDDWQGLEAVFGSYRDDTIA 179 Query: 182 --LIDAGMLVTNDQGRS-------YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLN 232 L++AG+L+ + + R YDRFR+R+MFPIR+ +G VIGFGGRV+G PKYLN Sbjct: 180 APLVEAGLLIESSEKRDADGKPRRYDRFRDRIMFPIRNTKGAVIGFGGRVIGQGEPKYLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET +F KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+LGT+ T Sbjct: 240 SPETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTPV 299 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 H+Q L R T++V+ +DGD AGR AA RALE LP++ D + +RF+FLP DPD+ VR+ Sbjct: 300 HVQKLLRQTDSVVFSFDGDAAGRRAARRALEACLPHVADNKAIRFLFLPAEHDPDSYVRE 359 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 EG EAF A++ AMPLS FL ++ + D+ P+GRAR A PL+ +P LR+ + Sbjct: 360 EGTEAFAAQVRDAMPLSRFLLQAVTEEQDMRQPEGRARAQYEAKPLLQAMPACGLRLQII 419 Query: 413 QELGNKLGILDDSQLER---LMPKAAESG-VSRPVPQLKRTT-----MRILIGLLVQNPE 463 +EL + G +++E L A +G ++P P+ KR R+L LL+ P Sbjct: 420 RELADATGT-TPAEIEAICGLRSDPARAGRFAQPRPRAKRQAPTGLEQRVL-QLLMCYPS 477 Query: 464 LAT 466 LA Sbjct: 478 LAA 480 >UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 RepID=C7I405_THIIN Length = 624 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 210/439 (47%), Positives = 276/439 (62%), Gaps = 25/439 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP FI DLLAR DIV+++ V+LKK G N+ CPFH EKTPSFTV+ KQFYH Sbjct: 1 MQQRIPPGFIQDLLARADIVEVVGQYVELKKTGTNYKGLCPFHGEKTPSFTVSASKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ-- 118 CFGCGAHG AI FLM + + FV+ V+ELA + + VP E P Q+ + Q+Q Q Sbjct: 61 CFGCGAHGTAIGFLMEHAGMGFVDAVKELAGRYGMTVP-EPDLDPQQLRQLQQQRSLQAT 119 Query: 119 LMDGLNT---FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L+D L T FYQ L+ + A+ YL RGL +V +F +G+AP W + F Sbjct: 120 LVDALQTADGFYQHRLRH--SERAKNYLIARGLQGQVAKKFGLGYAPDDWQPLAGAFANY 177 Query: 176 PENRQSLIDAGMLVTNDQG---------------RSYDRFRERVMFPIRDKRGRVIGFGG 220 N +L+ +G++V D R YDR R+R+ FPIR+ RG VIGFGG Sbjct: 178 --NADALVQSGLVVARDAAGDTLDPQAESFASAQRRYDRLRDRITFPIRNLRGEVIGFGG 235 Query: 221 RVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINY 280 R++ PKYLNSPET +FHKG +LYGL+EA+ + LVVEGYMDVVALAQ+G+ Sbjct: 236 RIIDQGEPKYLNSPETAVFHKGEELYGLFEARSAISRAGYALVVEGYMDVVALAQFGVEQ 295 Query: 281 AVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFL 340 AVA+LGT+ TA +Q LFR T V+ +DGD AGR AA RA+E ALP ++D R ++F+FL Sbjct: 296 AVATLGTACTAQQLQKLFRHTGQVVFSFDGDTAGRRAARRAMEQALPLLSDTRVVKFLFL 355 Query: 341 PDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLIS 400 P DPD+ VR++G EAFE + +A PLS FLF+SL V ++T +GRA+ A PL+S Sbjct: 356 PAEHDPDSYVREKGAEAFEREIGRAQPLSEFLFSSLFDGVAMTTAEGRAQAIHEAGPLLS 415 Query: 401 QVPGETLRIYLRQELGNKL 419 Q+ L L +L +L Sbjct: 416 QITAPALLGQLVADLARRL 434 >UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5T2_MAGSM Length = 639 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 194/424 (45%), Positives = 270/424 (63%), Gaps = 1/424 (0%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 P F++ L R DIVD+I+ ++ LKKQG+N+ CPFH+EK+PSF+VN EK FY CFGC Sbjct: 4 FPDTFLDQLKERVDIVDVIERQLPLKKQGRNWIGLCPFHHEKSPSFSVNQEKGFYKCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQLMDGL 123 GA G+AI F+ + F E + ELAA L +P E P+Q + + +R L L++ Sbjct: 64 GASGDAIKFVQQTRGIPFEEAIRELAAQAGLPLPQEQRQNPAQAQAKEKRDRLRALLEES 123 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+Q L+ P AR YL++RGL+ E I+ + +GFAP GW N+L FGG + ++ Sbjct: 124 KRFFQGQLRAPNGGLARAYLQRRGLTAETISSYELGFAPAGWRNLLDFFGGGDSAIELML 183 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +AG+LV + G YDRFR R++FPI D RGR I FGGRVL ++ PKY+NSPET +++K Sbjct: 184 EAGLLVKKEDGSVYDRFRNRIIFPILDSRGRCIAFGGRVLTDEKPKYINSPETPLYNKSE 243 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LY L AQ+ + LVVEGYMD V LA++ + VA+LGT+ T H++LL++ TN Sbjct: 244 VLYALNRAQERWSRGEMALVVEGYMDAVMLAEHHLTGTVATLGTAVTEQHLKLLWQRTNR 303 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 +I C+DGD AGR AAWRALE L + R ++F+FLP+GEDPD+LV+KEG + F+ R Sbjct: 304 IIFCFDGDAAGRRAAWRALERGLQGLQADRHMQFLFLPEGEDPDSLVQKEGVQRFKERAN 363 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A + + Q+DL TP+GRA PLI+ V LR +LG+KLG + Sbjct: 364 GAYSPMQLMHKVMGEQLDLYTPEGRAAAVHRMRPLITSVADPVLRQLYADDLGHKLGGVS 423 Query: 424 DSQL 427 +QL Sbjct: 424 GAQL 427 >UniRef50_A5CX96 DNA primase n=2 Tax=sulfur-oxidizing symbionts RepID=A5CX96_VESOH Length = 594 Score = 363 bits (933), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 214/540 (39%), Positives = 309/540 (57%), Gaps = 33/540 (6%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F +DL R +IVD+I+ RV LKK GK++ ACCPFH+EKTPSF V+ EKQ Y CFGCG Sbjct: 8 FKDDLPNRVNIVDIINQRVPLKKAGKDYKACCPFHHEKTPSFIVSAEKQMYKCFGCGDGN 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLY-QLMDGLNTFY 127 I F+M +D L VE VE +A+ + V ++ P R T Y LM + FY Sbjct: 68 GVIKFVMKFDNLGLVEAVETIASESGISVVYDKNIKPID----TRLTRYLDLMQRVGQFY 123 Query: 128 QQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Q L+Q +A + A Y++ RG+S ++ RF +GFAPP N+L F + ++ L G Sbjct: 124 IQQLKQSLAKNKAVGYVKYRGISSQIAKRFELGFAPPN-SNLLFGFKQDSQDIADLKVMG 182 Query: 187 MLVTNDQGRS---YDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 +L +DQ RS YD F++R+MFPI + +G +I FGGR N+ KY NSPET IF K Sbjct: 183 LL-CDDQYRSGKYYDLFKDRIMFPIHNNKGNIIAFGGRSCNNNFKAKYFNSPETPIFSKS 241 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++LYGLY ++ + + +LVVEGYMDVV+L Q GI+ VA+LGT TT +H+ +LFR TN Sbjct: 242 KELYGLYHMRKYSRSIDYILVVEGYMDVVSLHQAGISQVVATLGTVTTVEHLNILFRTTN 301 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +I C+DGD+AG AAWRAL LP + G ++F+FLPD EDPDTLV+KE +AF R+ Sbjct: 302 TIIFCFDGDKAGEKAAWRALNITLPVIKAGITIKFLFLPDKEDPDTLVKKESSQAFVKRI 361 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQELGNKLGI 421 E A LS FLF+ + +VD +T +G+ TL L +S + + + Y Q L G Sbjct: 362 ENAQFLSKFLFSHIKTEVDFNTIEGK----TLFLERVSMLLRKINYKTYQHQLLEGLAGE 417 Query: 422 LDDS--QLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP--ELATLVPPLENLDEN 477 ++ S Q+E ++ + S S K + + ++ VP + N Sbjct: 418 VNQSIEQIESILERQDISTQSNTFSISKNYEEPPMFNFYDSDEKYQVPMSVPLISN---- 473 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS----MWDDIADKNIAEQ 533 L +++ L+ P + ++ R NNA L+KL+ + +DI + + EQ Sbjct: 474 ----NSLIDQMIGLLLNYPSMVDKTVMLRVRKINNADILQKLANLVLLQEDITLETMVEQ 529 >UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8_DELAS Length = 677 Score = 363 bits (931), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 206/445 (46%), Positives = 285/445 (64%), Gaps = 15/445 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI +LL+R D+VD++ V+L+K G NF CPFH+EK+PSFTV+ KQFYHCFGC Sbjct: 12 IPQSFIQELLSRVDVVDIVGRYVQLRKGGANFMGLCPFHSEKSPSFTVSPSKQFYHCFGC 71 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-----TLYQL 119 G +GNAI FLM++ + FVE V++LA+ L+VP + S P++ ER Q TL + Sbjct: 72 GKNGNAIGFLMDHAGMGFVEAVQDLASQVGLQVPQDDIS-PAERERQAAQKQKQATLTDV 130 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ Y++ L+ + A YL++RG+S E RF +G+AP GW ++ F P+ Sbjct: 131 LEKAGDAYRKHLK--ASPQAIDYLKRRGVSGETAKRFGLGYAPAGWRSLASVF---PQYD 185 Query: 180 QSLIDAGMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 ++ LV +G + YDRFR+R+MFPIR+ +G IGFGGRV G++ PKYLNSPET Sbjct: 186 DPQLEESGLVIVGEGDDKRYDRFRDRLMFPIRNVKGECIGFGGRVFGDEKPKYLNSPETP 245 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKGR+LYGL+EA+ + LV EGYMDVVALAQ G AVA+LGT+ T DHI L Sbjct: 246 VFHKGRELYGLFEARTALRDMGYALVTEGYMDVVALAQLGFANAVATLGTACTPDHIHKL 305 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR T V+ +DGD AGR AA +AL+ ALPY +D R ++F+FLP DPD+ +R+ G EA Sbjct: 306 FRFTEAVVFSFDGDAAGRRAARKALDAALPYASDTRSVKFLFLPAEHDPDSFIREYGSEA 365 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F + A+PLS FL + DL +GRA +++ A PL + +P L+ L E+ Sbjct: 366 FARYVGDALPLSRFLIEAASEGCDLGQAEGRAHMASNARPLWTALPDGALKRQLLGEIA- 424 Query: 418 KLGILDDSQLERLMPK-AAESGVSR 441 +L LD L L + AA SG +R Sbjct: 425 ELVQLDARDLSDLWSQEAARSGPAR 449 >UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 RepID=B6BW93_9PROT Length = 578 Score = 361 bits (926), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 191/468 (40%), Positives = 287/468 (61%), Gaps = 15/468 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI ++L R D+VD++D RVKLKK G N+ ACCPFH EK+PSFTV+ KQFYHCFGC Sbjct: 2 IPESFIQEILNRIDVVDVVDQRVKLKKAGANYVACCPFHQEKSPSFTVSPSKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI FLM YD L F+E+V+ +A L VP + + ++ L +++ N Sbjct: 62 GAHGSAISFLMEYDGLTFIESVQSIANQLGLAVPNDQSNVKK--DKADEFKLEEILKRAN 119 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++++L+ + A YL+KRGL+ V F IG+A W + K F E + L Sbjct: 120 QHFKKNLRS--SELAINYLKKRGLTGTVAREFQIGYASDDWQGLKKEFENYEEPK--LQT 175 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKGR 243 AG++ ND G+ YDRFR R++FPI + + +IGFGGRV+ D PKY NSPET +F K Sbjct: 176 AGLVQKNDSGKIYDRFRNRIIFPIINAKDNIIGFGGRVINKEDQPKYYNSPETPLFKKSY 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 ++YGL +A++ E N +L+VEGYMDV++L Q+GI AVA+LGT+TT H++ L R + Sbjct: 236 EVYGLPQAKKGIREDNNILIVEGYMDVISLYQHGIENAVATLGTATTIYHLKKLIRYSKK 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 + C+DGD AG++AAW+AL TA+ + D + F+FLP+GEDPDT + K + F+ ++ Sbjct: 296 ITFCFDGDHAGKEAAWKALNTAVEILEDDYEFYFLFLPEGEDPDTFITKNSIQDFKKYID 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A PL+ F+ L + DL++ + + + P+ ++ +I+L + + + L Sbjct: 356 HATPLTEFIVKRLTEKNDLTSQENKIKFINNFEPIYKKINSNKYKIFLIKRIAD-LIHFS 414 Query: 424 DSQLERLMP-KAAESGVS------RPVPQLKRTTMRILIGLLVQNPEL 464 ++E++M ++AE+ S P + T R I +LV PEL Sbjct: 415 QREIEKMMRIESAENYSSSQQIKYSPSTRNSLTAKRKYILILVMKPEL 462 >UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9IK88_BORPD Length = 682 Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 197/419 (47%), Positives = 275/419 (65%), Gaps = 8/419 (1%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI DLLAR D+VD++ V+L+K G N CPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 2 IPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT----LYQLM 120 GAHG AI FLM + F E V LA + VP E S Q E +R+ Q++ Sbjct: 62 GAHGTAITFLMEHTGASFPEAVRTLAGSVGMTVPEENRSPRQQAESARRKAEESRHTQVL 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D Y + L+ + +A QYL++RGL+ E+ A F +G++ + K F + + Sbjct: 122 DAAQAHYLRQLR--ASPAAIQYLKQRGLTGEIAAHFGLGWSGTDRHGLAKVF--DNYDDP 177 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 +L++AG+++ ++ GR YDRFRERVMFPIR+ RG +IGFGGR++G PKYLNSPET +F Sbjct: 178 TLVEAGLVIESEDGRRYDRFRERVMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLFS 237 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG++LYGL+EA+Q + +++VVEGYMDVV LAQ GI AVA+LGT+TT DH++ L R+ Sbjct: 238 KGQELYGLWEARQAIRQEGQVIVVEGYMDVVGLAQQGIANAVATLGTATTPDHVKKLLRS 297 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 ++ V+ +DGD AGR AAWRAL+ LP + D +RF+FLP DPD+ VR+ G EAF A Sbjct: 298 SDRVVFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVRELGAEAFRA 357 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +AM LS FL L + +L+ +GRA A PL++ +P LR+ + +E+ ++ Sbjct: 358 CLGEAMALSRFLLEELASRHNLAEAEGRASCLHEAKPLLAAIPECALRLQIEREMARQV 416 >UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK4_ACIF5 Length = 583 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 200/480 (41%), Positives = 289/480 (60%), Gaps = 24/480 (5%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 FI+ LL D+V LID+RV LKK+G++F ACCPFH EK+PSF+V+ +KQ Y+CFGC AH Sbjct: 7 AFIDALLEHCDLVRLIDSRVPLKKKGRDFWACCPFHQEKSPSFSVSADKQIYYCFGCHAH 66 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 GNAI FLM +D+L F E V+ LA + +P + +G E+ + L +++ Y Sbjct: 67 GNAIGFLMAHDRLSFPEAVKTLADEVGVALPEDGPAG----EQESLRPLRAILEKAIGVY 122 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 + +L + A++YL RGLS E+I RF +G+AP + ++ G P RQ L+ AG+ Sbjct: 123 RSALAE--HPPAQEYLRGRGLSEEIIGRFELGYAPSAAGFLSQKLGREPSLRQQLLGAGL 180 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + + G YDRFR RV+FPIRD RG+ +G GGR L PKYLNSPE+ ++HKGR LYG Sbjct: 181 VSGREDGSVYDRFRGRVIFPIRDGRGQAVGLGGRSLDGHEPKYLNSPESALYHKGRVLYG 240 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L++A++ R+L+VEGY+DV+ L Q GI+YAVA+ GT+ +++LFRA + V+ C Sbjct: 241 LHQAREGMRRAGRVLLVEGYLDVITLHQAGIDYAVAASGTALGDSQMEMLFRAAHEVLLC 300 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 +DGD AGR+AAWRA++TA ++ GR LR +FLPDG+DPD+LVR++G FE+ + A P Sbjct: 301 FDGDTAGRNAAWRAVQTAPEHLRAGRLLRLLFLPDGQDPDSLVREQGGAVFESMLPTARP 360 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL----- 422 F L + +L+ D +A A + +V LR Q + G+ Sbjct: 361 AIDFFLEELQRRHNLAAEDEKALFLHAARDFLKRVSDPVLREVYEQRVQTLCGLAPVARR 420 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGL 482 S+ R +A G S L +T +R+L+ PE P + LD + LP L Sbjct: 421 ATSRAPRKATFSAAGGRS-----LFKTALRLLLNF----PE----DPAWQALDRDLLPFL 467 >UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8V4_HAHCH Length = 600 Score = 343 bits (881), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 179/422 (42%), Positives = 264/422 (62%), Gaps = 17/422 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQ--F 58 MA IP+ F++DLL+R D+ LI RV LKK G + CPFH+EK+PSF V E Sbjct: 1 MASLIPQAFVDDLLSRVDLASLIAERVNLKKSGATYQGRCPFHDEKSPSFHVYNENHPAH 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHC+GCGAHG+AI+F+ + L F E VE+LA +EVP + ++ + Q ++LY Sbjct: 61 YHCYGCGAHGDAINFIKETEHLSFNEAVEQLAKRCGVEVPRDK---VAEQKVSQNKSLYD 117 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 ++ ++Q+L P A++YL++RG+S E+ + IGFAP ++F Sbjct: 118 ASSHADSAFRQALGNHPQRGVAQEYLKRRGISPEMADLYGIGFAP-----AQRQFLSGTS 172 Query: 178 NRQSLIDA----GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233 +R SL+ A +++ +Q R +D F+ R+MFPIRD RGR I FGGR LGND KY+NS Sbjct: 173 DR-SLVKALSTLRLVIEKEQDR-FDMFQNRLMFPIRDTRGRTIAFGGRTLGNDRSKYINS 230 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PE+ IFHK LYGL+EA++ + + +L+VVEGY+DV++LAQ+G+ AVA++GT+T D+ Sbjct: 231 PESPIFHKSNVLYGLWEARKQSRKLEQLIVVEGYLDVISLAQFGVVNAVAAMGTATNEDN 290 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 + L + +++ C+DGD+AG AA +AL LP DG ++ F+ LP+GEDPDT VR E Sbjct: 291 LSHLLNTSQDIVFCFDGDKAGLAAADKALNNLLPMFQDGYKVSFLILPEGEDPDTFVRNE 350 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G +AF R+ A PLS + F ++ +DLS + + LST A + + L+ L Q Sbjct: 351 GADAFRERIANATPLSEYFFQAMSRGLDLSIAENKGILSTQARAALKVINAPVLKDALYQ 410 Query: 414 EL 415 L Sbjct: 411 RL 412 >UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H3_MAGSA Length = 623 Score = 341 bits (874), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 178/387 (45%), Positives = 237/387 (61%), Gaps = 2/387 (0%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 P F+++L AR + ++ RVKL ++G+ CPFHNEKTPSFTVN +K F+HCFGC Sbjct: 3 FPPQFLDELRARIPVTSVVARRVKLVRKGREHQGLCPFHNEKTPSFTVNEDKGFFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI F M L F E VE+LAA +EVP S ++ +R +L+ ++ + Sbjct: 63 GAHGDAIGFEMRAGHLSFTEAVEKLAAEAGIEVP--KASPEERVREQRRASLHDALEAAS 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 F+++ L+ P YL+ RGLS + IARF +GFAP + + LI+ Sbjct: 121 AFFEKHLRGPAGRDGFAYLKNRGLSDDTIARFRLGFAPDSREALKSALMSKECPESLLIE 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L + G S+D FR RVMFPI D+RGRVIGFG R LG+ PKYLNSP+T +FHKG+ Sbjct: 181 AGLLKKPESGASFDYFRGRVMFPITDRRGRVIGFGARTLGDGQPKYLNSPDTPLFHKGQT 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A++ E NR++VVEGYMDV+AL Q G YAVA LGT+ T I+ L+R Sbjct: 241 LYGLAHAREMARELNRVVVVEGYMDVIALHQAGFAYAVAPLGTAVTEQQIEELWRLAPEP 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I C DGD+AG+ A RALE A P + G+ LRF LP EDPD+L++ G A A ++ Sbjct: 301 ILCLDGDKAGQRAMERALERAFPILKPGQSLRFATLPAPEDPDSLIKARGPAAMAAVLDA 360 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARL 391 A PL + L TP+ RA L Sbjct: 361 AQPLVEVAWRVATQDRPLDTPERRALL 387 >UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QCP0_9RHIZ Length = 661 Score = 337 bits (865), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 203/514 (39%), Positives = 280/514 (54%), Gaps = 34/514 (6%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F++++ AR + ++ +V LKK G+ + PF EK+PSF VN +K FYHCF G HG Sbjct: 7 FLDEIRARLPVSQVVGRKVALKKAGREYRGLSPFKTEKSPSFFVNDQKGFYHCFASGEHG 66 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-----QRQTLYQLMDGL 123 + FLM + LEF E VE LA VP P Q ER+ QR LY+L++ Sbjct: 67 DIFTFLMKTEGLEFPEAVERLA--QEAGVPM-----PKQPERNVADEDQRDRLYRLLEAS 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+++SL+ + AR+Y+EKRGL HE + F +GFAP + G + + Sbjct: 120 AAFFEESLRSGLGAEARRYIEKRGLQHETVRAFRLGFAPNSRTALTAHLKGKGFSLADMA 179 Query: 184 DAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 AGML+ +D YDRFR RVMFPI D +GRVI FGGR L D P KYLNSPET +FHK Sbjct: 180 SAGMLIAGSDIPEPYDRFRNRVMFPILDLKGRVIAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ A+ + NR++VVEGYMDVVALA+ G +VA LGT+ T D ++LL+R Sbjct: 240 GHTLFNAARARSAAHDKNRVIVVEGYMDVVALAEGGFAESVAPLGTALTEDQVKLLWRFA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 C+DGD AGR AA RA+E ALP++ G L F FLPDG DPD L+R++G A Sbjct: 300 PEPTLCFDGDSAGRKAADRAVEVALPWLKPGHSLGFAFLPDGLDPDDLIRQQGAAAMSDA 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +A PL L++ + TP+ RA L L+ + T+R + ++EL ++L Sbjct: 360 LSKARPLVDVLWDRELRAAPSDTPEQRAALEARLFALVGTIQDATVRSHYQRELRDRLYQ 419 Query: 422 LDDSQLERLMP---------KAAESGVSRPV--PQLKRTTMRILIG----LLVQN--PEL 464 L ++ R M A++ +RPV P K L G +N PEL Sbjct: 420 LGRNRFPRPMAGLPTGRQGGGIAQASYARPVAAPDWKARDRARLNGPERRFTKKNNAPEL 479 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGL 498 P L ++ LP L ++ T L+ P L Sbjct: 480 VNASPELAGHMQSVLPREAL---IMKTLLNHPWL 510 >UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WEJ5_ZYMMN Length = 628 Score = 334 bits (856), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 215/576 (37%), Positives = 310/576 (53%), Gaps = 41/576 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+++L R + LI VKL + G+ F ACCPFHNEKTPSF VN EK FYHCFGC Sbjct: 7 LPPEFLDELRQRITLSSLIGRTVKLTRAGREFRACCPFHNEKTPSFYVNDEKGFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-TLYQLMDGL 123 GAHG+AI F+ L F++ V ELA +++P + P+ + + +R TL+ +M Sbjct: 67 GAHGDAIRFVTETRGLSFMDAVRELAGQAGMDIP---EANPAAVRQAKRTATLHDIMAEA 123 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++ + L R+YL+ RG+S + F +GFAP G + + + LI Sbjct: 124 AKWFSEQLHGIEGAEVRRYLDNRGISPAIAQNFGLGFAPNGRGRLKNALSHHAVEK--LI 181 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-----GN----DTPKYLNSP 234 + G+L++ + YDRFR R+M PI+D+RGRVI FGGR L GN ++PKYLNSP Sbjct: 182 EVGLLISVEGRDPYDRFRGRLMIPIKDQRGRVIAFGGRRLESIEGGNSLPDNSPKYLNSP 241 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +F KGR LY + +A Q NR++VVEGY+DV+ LAQ GI+ AVA LGT+ T I Sbjct: 242 ETPLFDKGRTLYNIDKASQAARRQNRIIVVEGYLDVIGLAQAGIHEAVAPLGTALTEHQI 301 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 + L+R + I C+DGD AG+ AA RA E AL G+ L F+ LP+G+DPD LV+++G Sbjct: 302 ERLWRIEDKPILCFDGDSAGQKAAVRAAERALVQARPGKTLSFVTLPNGKDPDDLVKEQG 361 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRA----RLSTLALPLISQVPGETLRIY 410 K AFE + + + L L+ Q+D +P+GRA RL LA + R Sbjct: 362 KSAFEEVLSRPIALDRLLYRFEASQIDPQSPEGRAALSKRLDELAASCRDEFIARGYRSN 421 Query: 411 LRQELGNKLGILDDSQLERLMPKAAE---SGVSRP-VPQLK-RTTMRILIGLLVQNPELA 465 + G Q + AA S +S P + L+ + + +ILIGL + PE Sbjct: 422 FKNLFYENFGWKSKKQQDSQTTIAATVTLSDLSTPTISDLECQYSRQILIGLSLY-PE-- 478 Query: 466 TLVPPLENLDENKL--PGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW 522 + LE L E + P L +RE L+ +S+P L + + N + W Sbjct: 479 AIKQRLERLAELAVTDPKLKKWRETLITAVISEPDLDRDTIKAILKADANV----DIDTW 534 Query: 523 DDIAD-------KNIAEQTFTDSLNHMFDSLLELRQ 551 D D +IA +SL + D ++E R+ Sbjct: 535 DIKKDLRFPFTRPDIAPDLAIESLVALIDLVVEERE 570 >UniRef50_Q6F8J4 DNA primase n=16 Tax=Acinetobacter RepID=Q6F8J4_ACIAD Length = 629 Score = 333 bits (855), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 190/477 (39%), Positives = 276/477 (57%), Gaps = 67/477 (14%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ I+ +L RTD+V+LI RVKLKK G+ + CCPFH EK+PSF V +K +YHCFGC Sbjct: 3 IPQHTIDQILDRTDLVELIGQRVKLKKTGRTYSGCCPFHQEKSPSFHVYRDKGYYHCFGC 62 Query: 65 GAHG------------NAIDFLM-------------NYD--KLEF-----------VETV 86 A+G N ID + N++ KL + V Sbjct: 63 QANGNAIRFLMDIDGRNFIDVMQELSSKSGVELPKDNFEQKKLSYKRNTQKPEPKPVVNT 122 Query: 87 EELAAMHN------------LEVPFEAGSGPSQIERH--------QRQTLYQLMDGLNTF 126 E+ A H+ L+ P +Q ++ Q LY L++ + F Sbjct: 123 EKSAPSHHAAISESSEQIDGLQAPSYFDDPFAQFDQSYMGFEDAPQEGNLYDLLENVAQF 182 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y++ L P + A+QY ++RGLS E I + +G+AP W ++ K F P + + L G Sbjct: 183 YEKQL--PNSNKAQQYFKQRGLSAETIQFWRLGYAPEDWQHLEKAF---PYDIEGLKQVG 237 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQL 245 ++ ++D GR +D RERV+FPIRD +GRV+GFGGR L ++ PKY+NSP+++IFHK + L Sbjct: 238 LIRSSDSGRDFDLLRERVIFPIRDHKGRVVGFGGRALNDEIKPKYINSPDSEIFHKNQLL 297 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGLYE ++ A+ L+VEGYMDV+AL QYG+ AVA+LGT++ ADH+ LF+ + + Sbjct: 298 YGLYEGRKLKAKD--WLMVEGYMDVIALQQYGVYGAVATLGTASNADHLNTLFKQNSRIT 355 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +DGD AG+ AA R LE ALP + DGR+L+F LP DPD+L+R+EG E F+ +EQA Sbjct: 356 IAFDGDAAGQKAARRTLEIALPSLNDGRELKFFVLPKEHDPDSLIRREGLEHFQRLLEQA 415 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQELGNKLGI 421 LS F+F L Q D+STP+G++++ L +P + + R L Q KLG+ Sbjct: 416 PLLSDFIFAHLTQQHDISTPEGKSQVMGELRELTELLPKQGSFRYLLTQSFREKLGL 472 >UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 Length = 643 Score = 331 bits (848), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 175/418 (41%), Positives = 248/418 (59%), Gaps = 4/418 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P F++++ R + +++ RVKLKKQG+ F PF+ EKTPSF VN +K FYHCF Sbjct: 2 RFPPSFLDEIRTRLPVSEVVGRRVKLKKQGREFAGLSPFNAEKTPSFFVNDQKGFYHCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ DFLM + L F E VE LA+M L +P ++ R R+TL+++M+ Sbjct: 62 SGKHGDVFDFLMETEGLPFGEAVERLASMAGLPLPDVTPEAAAKEAR--RRTLHEVMEMA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F++ LQ AR YL RGL RF +G+AP + + G ++ Sbjct: 120 AAFFEAELQARAGAKARGYLSDRGLGPSTQKRFRLGYAPGDRFALKEALGKAGVPVSDMV 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 + G+L+ D YDRFR+RVMFPI D +GRV+ FGGR L D P KYLNSPET +FHK Sbjct: 180 ETGLLIAGDDIPVPYDRFRDRVMFPITDLKGRVVAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY Y A+ + ++ VEGY+DV+AL + G AVA LGT+ T + +QLL+R Sbjct: 240 GSLLYNAYSARAAVQKGAPVIAVEGYVDVIALVEAGFEGAVAPLGTALTEEQLQLLWRMA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + + +DGD+AGR AA+RA+ ALP++ G+ L F LPDG+DPD L+R G+EA E Sbjct: 300 DEPVLLFDGDKAGRRAAFRAVGLALPHIKPGKSLSFGALPDGQDPDDLIRASGREAMEGV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + QA PLSA L+ +L TP+ RA L ++ + E +R + +Q+L ++L Sbjct: 360 LAQAQPLSAMLWARETEGSNLETPERRAALEARIGEAVAAIQDENVRRHYKQDLQDRL 417 >UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWY0_9PROT Length = 580 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 184/457 (40%), Positives = 263/457 (57%), Gaps = 8/457 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F++++LARTDIV+LI V+LKK G N CPFH+EK+PSF+V+ +KQ Y+CFGCG G Sbjct: 8 FLDEVLARTDIVELIGRHVELKKSGSNLMGLCPFHHEKSPSFSVSADKQLYYCFGCGQGG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 A FLM +D F E VE LA LEVP E R +R Y+L++ Sbjct: 68 GAFQFLMEHDGYAFPEAVEYLAEKAGLEVPQETKQDHGDEVRQKRD--YELLERAAQAMN 125 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 ++L + A YL++RGL ++I + +G+APPG+ + + FG + L G++ Sbjct: 126 KALHGELGGKAAAYLQQRGLPADIIRDYMLGYAPPGYGFMKRLFGSDSATNSRLETVGLV 185 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGRQLY 246 + G DRFR+R+MF IRD+RGR++GFGGRVLG+ KYLNSPET FHK LY Sbjct: 186 FKGEHGYG-DRFRDRLMFAIRDRRGRIVGFGGRVLGSGEGEAKYLNSPETPYFHKSDLLY 244 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 G E + + +L+VVEGYMDV+ALA +G+ +A LGT+ I+ +FR + + Sbjct: 245 GFSEHRDTIRKSKQLVVVEGYMDVLALASHGLKIGLAPLGTAIGERQIREIFRLCDTPVF 304 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-EQA 365 C+DGDRAGR AAWRALE LP + F++LP+GEDPD+L+++EG EAF R+ E+A Sbjct: 305 CFDGDRAGRQAAWRALERMLPLLKAELMPAFLYLPEGEDPDSLLKQEGGEAFARRLKEEA 364 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 P+ + L + +GRAR++ A +++ + L RQE GI Sbjct: 365 KPVLETWLHGL-KLLAGQGAEGRARMAKKADTMLAAMTDSYLMQAWRQEAERSSGIALQH 423 Query: 426 QLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP 462 + + A +R L R + GL+ Q P Sbjct: 424 RRRAAVTDVASEPAARADIVLNPVEDRFMAGLM-QKP 459 >UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 Length = 606 Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 160/402 (39%), Positives = 246/402 (61%), Gaps = 15/402 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +I FI +L+A DI D++ V L K GKN+ ACCPFHNEKTPSF VN +K+F+H Sbjct: 1 MAKKISNNFIKELVANADIADVVSRYVNLTKSGKNYKACCPFHNEKTPSFFVNSQKRFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+A+ F+ + L+FVE V+ LA + V +E SQ + H+ Q L+ Sbjct: 61 CFGCHESGDALTFVKKINNLDFVEAVKTLAEIVGKPVEYE---NYSQEDLHKEQ-LFNKC 116 Query: 121 DGLNTFYQQSLQQPVATSARQ-----YLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 G Q+ + + SA + YL+KRG+ ++ F IG++ GW+NV + Sbjct: 117 IGFLAIAQKYYRWNLGNSASKEKAVGYLKKRGIDSDLAKVFGIGYSSEGWNNVTQLAKSV 176 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSP 234 + LID G+ + ND+G YDRFR R+MFPIR+ +G VIG+GGRV+ + D KY+NSP Sbjct: 177 NVSEDILIDTGLAIKNDKGNVYDRFRNRIMFPIRNIQGNVIGYGGRVIDDSDGVKYINSP 236 Query: 235 ETDIFHKGRQLYGLYEAQQDNAE-----PNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 ET +F K LYGLYE ++ + L+VVEGYMDV+ LA+YG AVA+LGT+ Sbjct: 237 ETIVFQKNNILYGLYEYREKKKQYPDLANQSLIVVEGYMDVIGLAKYGFYSAVATLGTAF 296 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 + +H ++LFR +N+++ C+DGD AG+ A R ++ LP + ++LR + L G+DPD Sbjct: 297 SQNHAKILFRESNSIVLCFDGDSAGQKAVVRTIKIILPILDGNKKLRILTLEHGKDPDDY 356 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARL 391 +++ G + F ++++ + F+ N ++ D+S + ++ + Sbjct: 357 IKEYGLDNFNNSLKKSQSVLDFIINYIINNKDVSKAECKSEI 398 >UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZS4_9PROT Length = 616 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 190/562 (33%), Positives = 303/562 (53%), Gaps = 37/562 (6%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P+ F+++L R + ++ R L ++G+ F + CPFH++ PS + +K FYHCF C Sbjct: 3 LPQGFLDELRDRVSVSSMVGRRHALIRKGREFVSLCPFHSDSKPSLNIVDDKGFYHCFAC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGL 123 GAHG+ I F+M + L F+E +E+LA + LEVP E P + +R +R ++L +++D Sbjct: 63 GAHGDVIKFVMETEGLGFMEAIEQLAGVAGLEVPKET---PEERQRAERTRSLQEVVDLA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y++ L+ + + +YL +RGLS E IARF +G+AP + + L+ Sbjct: 120 CRWYERQLRTSIGDAGLRYLRERGLSEETIARFRLGWAPEDRKALQRAMKAEGVEVDILV 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +AG++ D G + D R RV+FPI D+RG+VI FGGRVLG+ PKYLNSP+T +FHKGR Sbjct: 180 EAGLVKRYDDGETGDYMRGRVLFPITDRRGKVIAFGGRVLGDGQPKYLNSPDTPLFHKGR 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL +A++ + L+V EGYMDV+ALAQ GI +VA LGT+ T D I L++ Sbjct: 240 VLYGLAQAREAAHKSGTLVVTEGYMDVIALAQVGIP-SVAPLGTALTEDQIAELWKVVPE 298 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 + C+DGD AG+ AA RA + ALP +T G LRF+ LP+GEDPD+L R++G F ++ Sbjct: 299 PVVCFDGDTAGQRAATRACDRALPMLTPGHSLRFIVLPEGEDPDSLTRRDGPSGFRRLLD 358 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A P+ L+ + + TP+ RA I + T++ E+ ++ + Sbjct: 359 AAEPMVDRLWTAEATSGPVDTPERRADFWRRVRERIRVIADRTVQQSYSDEIETRIEAMR 418 Query: 424 DSQLER---------------------LMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP 462 S+ R + P + + +R L + +I++ ++ +P Sbjct: 419 PSRQNRSDGRGSAGRGTFKGGKWTPPPVEPPGSRASRARVDTALGQRQQQIILATVIHHP 478 Query: 463 ----ELATLVPPLENLDE--NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 EL + LE D+ +K L RE++ + P L L +H + + T+ Sbjct: 479 GLLDELGETLAHLELGDQFLDK-----LRREILEITEADPDLDAAGLTDHLKALGYSDTV 533 Query: 517 EKLSMWDDIADKNIAEQTFTDS 538 L D ++ A + T S Sbjct: 534 NGLLGADSLSHAAFARPSATHS 555 >UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRS5_9GAMM Length = 586 Score = 324 bits (831), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 194/465 (41%), Positives = 275/465 (59%), Gaps = 16/465 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R + FI+ +LAR+DI+ LID+RV LKK+GK++ +CCPFH EK+PSF+V+ EKQ Y+CFG Sbjct: 3 RFSQAFIDTVLARSDILRLIDSRVSLKKKGKDYWSCCPFHQEKSPSFSVSPEKQIYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQLMDG 122 C AHGNAI FLM Y++L FVE V LA + +P E GP + + +++ Sbjct: 63 CHAHGNAIGFLMAYERLSFVEAVSLLAEEAGIPLPQEGRPEGPDP------RPVRAILEA 116 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y+++L A+ Y +RGLS F +GFAP + R G N R+ L Sbjct: 117 AEKLYREALHS--HPPAQAYWRQRGLSEATWNHFGLGFAPDQAQFLTSRLGQNSAQRELL 174 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 + AG++ D GR YDRFR RV+FP+RD RG++ GF GR PKYLNSPET ++HKG Sbjct: 175 VAAGLVSRRDDGRYYDRFRARVIFPLRDGRGQLCGFAGRSTDGREPKYLNSPETILYHKG 234 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + LYGL A++ R+++VEGY+DV+ L Q G+++AVA+ GT+ T +++L+R Sbjct: 235 QMLYGLDLAREGIRRRRRVVLVEGYLDVITLHQAGLDFAVAASGTALTDKQLEILWRTAG 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 ++ C+DGD AGR AAWRAL+ A + GR LR +FLP+GEDPD+LVRK G AFE + Sbjct: 295 EIVLCFDGDAAGRAAAWRALQLAPARLRPGRLLRVLFLPEGEDPDSLVRKGGAAAFEEIL 354 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 QA P + L + DL D +A+ A ++QV LR Q L G+ Sbjct: 355 AQARPALDHHLSVLRERYDLKKADEKAQFLGEARAFLAQVQDADLRAVYGQRLEEIAGVA 414 Query: 423 DDSQLERLMPKAAESGVSRPVP-QLKR----TTMRILIGLLVQNP 462 L + +A +PVP + KR + + + LL+Q P Sbjct: 415 --VVLPKTSAQAFPESAPKPVPVKAKRPGRPSLCQAALRLLLQRP 457 >UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCL1_9GAMM Length = 564 Score = 322 bits (825), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 176/424 (41%), Positives = 242/424 (57%), Gaps = 8/424 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MA RIP+ FI++L ARTD++ L+ +R+ KK G N ACCPFH+EKTPSF+VN +K FY Sbjct: 1 MAKRIPKPFIDELTARTDLLALLSSRITFTKKSGSNHWACCPFHDEKTPSFSVNTQKGFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL-YQ 118 HCFGCG G+AI FLM+YD L F E +E LA + L VP+E + R L + Sbjct: 61 HCFGCGVSGDAIRFLMDYDNLPFPEAIERLAEFNGLSVPYEDDGRQVDPQEKDRYDLGLE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + F+ ++ +AR YL +R L + F +G+APPG N L G+ Sbjct: 121 CLADAAAFFHEAFYGESGKAARDYLRQRRLKKATVDTFLLGYAPPG--NALLAHLGSKYP 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q L D G++ D YD FRERV+FPI + +G+ I FG R +G PKYLNSPET Sbjct: 179 LQLLQDVGLVGVKDD-HHYDWFRERVIFPIHNIKGKTIAFGARAMGEAQPKYLNSPETTW 237 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K +LYGL++A Q LLV EGYMDV+ L Q+G+ AVA+LGT+ HI L Sbjct: 238 FNKRFELYGLHQAMQ--TRERTLLVTEGYMDVIKLWQHGVKNAVAALGTAIGDSHISQLR 295 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + V +DGD AG+ AA +ALE + RFMF+P GEDPD+LV K G AF Sbjct: 296 KRAEKVYFSFDGDTAGQKAARKALEAVFSQHDKQHEWRFMFMPAGEDPDSLVEKAGIAAF 355 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + M+ ++P SAF +L + + +A L+ A + +P R LR ++ Sbjct: 356 QQVMDASLPASAFFLQTLDDGAGAQRSAEAQAELAGEAQRWLELLPDADFREILRAQVMK 415 Query: 418 KLGI 421 + + Sbjct: 416 RFDL 419 >UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZN8_9RHOB Length = 652 Score = 320 bits (821), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 169/427 (39%), Positives = 246/427 (57%), Gaps = 11/427 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++F++D+ R + D++ RV ++ GK ++ ACCPFH+EK+PSF V+ + Sbjct: 2 RFDQLFLDDIRNRVSLTDVVGRRVTWDRRKSQPGKGDYWACCPFHSEKSPSFHVDERRNR 61 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLY 117 Y CFGCG G+ FLM + L F E VEELA + + +P P +R +R TL Sbjct: 62 YKCFGCGESGDHFKFLMETEGLSFPEAVEELAGLAGIAMP---APDPQAAKRAAKRNTLT 118 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 + + +Y+ Q +A++Y+++RGLS E + F GFAPPG DN+ K Sbjct: 119 DVCEMAARYYRHMFQSVEGRAAQEYVQRRGLSAETLNEFQFGFAPPGRDNLKKALMAKDI 178 Query: 178 NRQSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPE 235 + LI+ G+L+ D GR SYDRFR R+M PI D RGR + FGGR + D PKYLNSPE Sbjct: 179 SEAELIEVGLLIKPDDGRPSYDRFRNRLMIPIHDDRGRAVAFGGRTMDPDGQPKYLNSPE 238 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +FHKG L+ + A+Q E + +VVEGYMD +AL Q G+ VASLGT+ T D I Sbjct: 239 TPLFHKGTMLFNAHRARQPAYEAGQAIVVEGYMDAIALWQAGMKGTVASLGTAFTEDQIM 298 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L++ + + C+DGD AG AA RA++ LP +T G+ +F FLPDG+DPD ++ G Sbjct: 299 RLWKFADEPVICFDGDVAGISAAHRAVDRILPVLTSGKSFQFAFLPDGQDPDDVINAGGT 358 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 A +E+A+PLS ++ + TP+ +A L L+ + E ++ R +L Sbjct: 359 SAMYGELEKALPLSEVVWQRESEHARIDTPERKAALEKAVEDLVGTIKDERVQKRYRMDL 418 Query: 416 GNKLGIL 422 KL L Sbjct: 419 RLKLSNL 425 >UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 Length = 681 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 181/425 (42%), Positives = 237/425 (55%), Gaps = 16/425 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I LI RV ++ N F ACCPFH EKTPSF K Sbjct: 28 RFPPSFLDEIRDRVPISTLIGTRVSFDRKKSNPPKGDFWACCPFHGEKTPSFHCEDRKGR 87 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ FL + + L F E VE +A M VP A + QR TLY Sbjct: 88 YHCFGCGVTGDHFKFLTDLEGLSFPEAVERVADMAG--VPMPARDPEMEKREAQRATLYD 145 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M+ F++ LQ AR YL RGLS F +G+AP N LK F Sbjct: 146 VMELAAQFFESQLQSATGAKARAYLRDRGLSTATQQAFRMGYAPES-RNALKEFLAGKGV 204 Query: 179 RQSLIDAGMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPE 235 + I+A LV + +G SYDRFR+RVMFPI D RGR+I FGGR L D P KYLNSPE Sbjct: 205 SREQIEACGLVVHGEGIAVSYDRFRDRVMFPIEDLRGRIIAFGGRALSADAPAKYLNSPE 264 Query: 236 TDIFHKGRQLYGLYEA----QQDNAEPNR-LLVVEGYMDVVALAQYGINYAVASLGTSTT 290 T++FHKGR LY A Q EP + ++ VEGYMDV+ALAQ GI++ VA LGT+ T Sbjct: 265 TELFHKGRVLYNGLRARKACQPQGGEPAKPIIAVEGYMDVIALAQAGIHHVVAPLGTALT 324 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 + ++LL+R + I C+DGD AG AA+RA + LP + G+ LRF LP+G+DPD LV Sbjct: 325 EEQLELLWRISPEPILCFDGDGAGLRAAYRAADLGLPVLQPGKSLRFALLPEGQDPDDLV 384 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + EG AF A + A PL ++ TP+ RA L + S++ E +R + Sbjct: 385 KAEGPSAFHAVLRDARPLVEMVWTRETAGGVFDTPERRAELEARLREITSRIANEDIRRH 444 Query: 411 LRQEL 415 Q++ Sbjct: 445 YSQDM 449 >UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPB4_9FIRM Length = 606 Score = 319 bits (817), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 164/398 (41%), Positives = 246/398 (61%), Gaps = 8/398 (2%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F++ + + DIV +I V LKK+G+N+ CCPFH+EKTPSF+V EK F++CFGC G Sbjct: 9 FVDRVRSECDIVSVISDYVPLKKKGRNYWGCCPFHHEKTPSFSVTPEKGFFYCFGCQTGG 68 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGLNTFY 127 N +FLM + + F E V++LAA N+ +P E P++I R + +LY + + F+ Sbjct: 69 NVFNFLMKIENISFFEAVKKLAARLNIPLP-EREKSPAEIARERELASLYLANEYASEFF 127 Query: 128 QQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L + + AR+YL RG+S ++I F +GFAPP WD +++ + + L+ AG Sbjct: 128 HACLTKTNMGRVAREYLASRGISDDIIRNFKLGFAPPAWDKLVQALTRRGLSEELLLKAG 187 Query: 187 MLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 +++T +G YDRFR RVMFPIRD RGRV+GFGGRVL + +PKYLNSP+T +F+K L Sbjct: 188 LVLTRPRGDGIYDRFRNRVMFPIRDARGRVVGFGGRVLDDSSPKYLNSPDTLLFNKRHLL 247 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT-NNV 304 YGL A + E +++VVEGYMDV+ ++G VASLGT+ T + LL R + + V Sbjct: 248 YGLDAAIRSIKESGQVIVVEGYMDVITAHRFGFTNVVASLGTAFTPEQAGLLERCSVSQV 307 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + YD D AG+ A +RAL T G ++ + +P+G+DPD +R+ G EAF + Q Sbjct: 308 LFAYDSDAAGQSATFRALATV---RERGFNVKVVSIPEGKDPDEFLRRHGPEAFARVVAQ 364 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 AMP + + +D ST +G+ + + LP+++ V Sbjct: 365 AMPFVDYQLQQALESIDYSTLEGKVAVVSKILPVLASV 402 >UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQB5_RHORT Length = 620 Score = 317 bits (813), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 176/418 (42%), Positives = 253/418 (60%), Gaps = 8/418 (1%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+++L AR + ++ RVKL ++G+ F CPFHNEK+PSFTVN EK F+HCFGC Sbjct: 3 LPNAFLDELRARLTLSSVVGRRVKLARKGREFLGLCPFHNEKSPSFTVNDEKGFFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+ I F M + F E VE L+A LE+P E + + Q + ++M+ Sbjct: 63 GAHGDVIGFEMRAANIAFREAVERLSAEAGLEMPRE--TAEDRDRSRQAASHREIMEMAC 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPG--WDNVLKRFGGNPENRQSL 182 FYQ++L+ P A +YL RGL +ARF +GF+P G L R G + Q++ Sbjct: 121 AFYQKALRLPEGRGAMEYLRGRGLDDATLARFRLGFSPQGGALKAALAREG---VDEQAM 177 Query: 183 IDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +D G+++ +D GR ++D FR RVMFPI D GRV+ FG R+LG PKYLNSP+T +FHK Sbjct: 178 VDLGLILRSDDGRPAFDYFRGRVMFPIGDPAGRVVAFGARILGEGQPKYLNSPDTPLFHK 237 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY L A++ + ++V EGYMDV+ALA+ G+ +AVA LGT+ T ++ L+R Sbjct: 238 GHSLYNLGPAREAARQSGAIIVAEGYMDVIALARAGLGWAVAPLGTALTEAQMEALWRTI 297 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + C+DGD AGR AA RA+E ALP + GR LRF LP G DPD L+R+ G A Sbjct: 298 PEPVLCFDGDGAGRRAAARAMERALPLIGPGRSLRFALLPGGRDPDDLLREGGPVALRQV 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++ A+P S + L L+TP+ RA L ++++ +L+ + RQ L ++ Sbjct: 358 LDVAVPFSEMAWRELSEGQALTTPEQRAALEAAIDAFVAKIADRSLQGHYRQALRDRF 415 >UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q07SS4_RHOP5 Length = 688 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 170/413 (41%), Positives = 248/413 (60%), Gaps = 4/413 (0%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F++DL AR + D++ RVKLKK G+ + PF EKTPSF VN EKQ + F G +G Sbjct: 26 FLDDLKARLMVSDVVGRRVKLKKSGREWKGLSPFQQEKTPSFFVNDEKQAWFDFSSGKNG 85 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + DF+M + ++F E VE LAA+ + +P +A ++ ERH R++LY++M+ F+ Sbjct: 86 SIFDFVMQTEGVDFPEAVERLAALAGMALP-QATPDAARQERH-RKSLYEVMELAAAFFT 143 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 ++L AR YL R ++ +F +GFAP + + G + +++AG+L Sbjct: 144 ETLAARGGARARGYLADRAIAPATQVKFRLGFAPADRFALKEHLGKHGIPVSDMVEAGLL 203 Query: 189 VTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHKGRQLY 246 + D YDRFR+RVMFPI D RGRVI FGGR + D P KYLNSPET +FHKG LY Sbjct: 204 IAGDDIPVPYDRFRDRVMFPITDIRGRVIAFGGRAMEKDVPAKYLNSPETPLFHKGDNLY 263 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L A+ + L+VVEGY+DV+A++ G VA LGT+ T + +QLL++ + I Sbjct: 264 NLASARGAAHQGASLVVVEGYVDVIAMSAVGYAATVAPLGTALTENQLQLLWKMADEPIL 323 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 C+DGD+AG+ AAWRA + ALPY+ G+ LRF LP+G+DPD L + G+ A + + A Sbjct: 324 CFDGDKAGQKAAWRAADLALPYLAPGKSLRFALLPEGQDPDDLAKLGGRAAVDEVIGAAR 383 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 PL+ L++ +TP+ RA L L + + E +R Y RQ+LG +L Sbjct: 384 PLADVLWSREHGAGSFATPERRAALEARINELTNGIRDEVVRRYYRQDLGERL 436 >UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXR5_DICNV Length = 551 Score = 314 bits (805), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 162/373 (43%), Positives = 231/373 (61%), Gaps = 6/373 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 M RIP+ FI+DL+ RT+IV LI +R+ KK G N+ ACCPFH EKTPSFTV+ KQFY Sbjct: 1 MGKRIPKSFIDDLINRTNIVSLIGSRLSYAKKMGANYVACCPFHQEKTPSFTVSEVKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+A+ FLM+Y+ L FVE VE LA H L +P+E + E+ + + Sbjct: 61 YCFGCQAGGDALRFLMDYEHLSFVEAVESLAHFHGLTIPYEETESYNPEEKSRIELGLLC 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q+ A SAR+YL RG+ ++ F +G+AP G N L F + + Sbjct: 121 LADAAQFFQRCFYTEEAVSAREYLRARGIKKHLVDDFLLGYAPAG--NQLLAFLRD-KYE 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L+ A L+ GR YD FR+R+MFPIR+ RG++I FG R + N+ PKYLNS E+ F Sbjct: 178 LPLLQAVGLIGEKDGRYYDWFRQRLMFPIRNIRGQIIAFGARTIANEQPKYLNSAESPWF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K +LYG A + ++ L+V EGY+DV+ +AQ+G++ AVA+LGT+ H+Q L + Sbjct: 238 NKRNELYGFDTAAR--SKQTSLIVTEGYVDVIKMAQFGLDNAVATLGTAFGDTHLQQLKK 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + V C+DGD AG+ AA +AL + +G RF+FLP GEDPD+ + + G AF Sbjct: 296 RSKKVYFCFDGDAAGKHAAEKALHIIFTHYEEGYDWRFVFLPAGEDPDSFLTQHGSAAFL 355 Query: 360 ARMEQAMPLSAFL 372 ++ + P S FL Sbjct: 356 QLLDASEPPSLFL 368 >UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN Length = 634 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 176/475 (37%), Positives = 262/475 (55%), Gaps = 21/475 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P FI+++ AR + +++ RVKLK+ G+ F PF EKTPSFTVN +KQFYH F Sbjct: 2 RFPPSFIDEVKARLPVSEVVGRRVKLKRAGREFKGLSPFQQEKTPSFTVNDQKQFYHDFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HGN DF+M + + F E VE LAAM L +P S + +R++L+++M+ Sbjct: 62 TGKHGNIFDFVMETEGVSFPEAVERLAAMAGLPLP--RNSREDEQREQRRKSLFEVMELA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +++Q+L V AR YL R + I F IG+A + + G +I Sbjct: 120 AKYFEQNLASRVGAQARGYLSDRAIVPSSIVEFRIGYATADRFALKEYLGSKGVPVADMI 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHK 241 +AG+L+ D YDRFR+R+M PI D+RGR++GFGGR L D PKYLNSPET IFHK Sbjct: 180 EAGLLIAGDDIPVPYDRFRDRIMIPIHDQRGRLVGFGGRALRKDVQPKYLNSPETPIFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G ++ + A+Q E N ++ VEGYMD +A+ Q GI VA++GT+ T + I L+R + Sbjct: 240 GSVVFNFHRARQPAHEANSVVAVEGYMDAIAVYQAGIKAVVATMGTAFTEEQIATLWRLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + C+D DRAG AA+R+++ LP + G+ RF+F+ + +DPD L+R++G EAF Sbjct: 300 PEPVVCFDSDRAGVAAAYRSIDRILPLLRVGKTFRFVFMDEQKDPDDLIREKGVEAFRNV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL----RQELGN 417 + ++PL L+ D+ TPD +A L L+ + + R +L N Sbjct: 360 LSGSLPLWDVLWQRETDGQDVRTPDKQAALEQRLYALVRTIQDPAVNTAFFRTSRMQLAN 419 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTT--------MRILIGLLVQNPEL 464 Q+ R + + S+ V R ++L+G+LVQ PEL Sbjct: 420 LFW-----QVNRGPSRNQKEAGSKFVRNELRIRGEDQRSGLQKVLLGMLVQYPEL 469 >UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP60_9BACT Length = 611 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 158/395 (40%), Positives = 234/395 (59%), Gaps = 13/395 (3%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 R DIVD+I A VKLKK G F CPFHNEKTPSF VN QFYHCFGCGA G+ + F+ Sbjct: 15 RNDIVDIIGAHVKLKKNGPTFLGLCPFHNEKTPSFNVNQNDQFYHCFGCGASGDVLKFVQ 74 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER----HQRQTLYQLMDGLNTFYQQSL 131 Y+ L+F + +E+LA+ N+ +P E G G S ER ++++ L+ ++D F++Q L Sbjct: 75 EYESLDFRDALEKLASRANVILP-EWGKGQSPEERLKQKNEKEALFDVLDKATNFFKQQL 133 Query: 132 QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 P A +Y + RGL+ EVI + +G+AP WD V+K + + + L AG+ N Sbjct: 134 LLPQGAEALKYAQNRGLNQEVINNYRLGYAPNSWDAVMKWAKQHSISDELLATAGLTKQN 193 Query: 192 DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGRQLYGLY 249 +QG++YDRFR R+MFPI+D GRVI F RVL D+ KY+NSPET +FHKG LYGL+ Sbjct: 194 EQGKTYDRFRNRLMFPIQDISGRVIAFSARVLEKDSKAAKYINSPETPVFHKGNVLYGLH 253 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 A + E ++ EG +DV+A + G+ A+A+ GT+ T H ++ R +V C+D Sbjct: 254 IAHKHLKESEHFVICEGQLDVIACHRAGVKNAIAAQGTAFTDQHASMIARYAKHVKLCFD 313 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 D AG+ AA + L LP G + L +GEDPDT++ ++G E + ++ M Sbjct: 314 ADNAGKKAAVKCLNILLP---KGVIPEIISLEEGEDPDTVLSEQGAEVLKEKLSGGMNFV 370 Query: 370 AFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPG 404 F+ + P S + ++S L +++++P Sbjct: 371 DFILSDYGPS---SPSQEKVKISEFLLDILAKMPN 402 >UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9SPHN Length = 617 Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 166/417 (39%), Positives = 240/417 (57%), Gaps = 14/417 (3%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 + ++L AR + +I KL + G+ + ACCPFH+EK+PSF VN +K FYHCFGCGAHG Sbjct: 7 WKDELRARITLSSVIMRTTKLTRAGREWKACCPFHDEKSPSFYVNDQKSFYHCFGCGAHG 66 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQLMDGLNTFY 127 + I ++ L F++ +ELA+ +EVP P +R +R L + ++ Sbjct: 67 DVISWMTEQRGLSFIDACKELASEAGMEVP---APDPVAAKRAEKRAELVDVTTEAQEWF 123 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPP---GWDNVLKRFGGNPENRQSLID 184 Q+L++ V A YL+KRGL E + F G+AP N L RF Q L++ Sbjct: 124 VQNLREEVGREALDYLKKRGLKPETLREFGFGYAPESKQALPNALPRF-----EDQMLVE 178 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETDIFHKG 242 GM + D G +YDRFR RVM PI+D RGRVI FGGR+LG KYLNSP+T +F KG Sbjct: 179 TGMRIRTDDGTTYDRFRGRVMLPIQDTRGRVIAFGGRILGKREGVAKYLNSPDTPLFDKG 238 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R LY ++ A + + R++VVEGYMDVVALAQ G AVA +GT+ T +++L+R Sbjct: 239 RNLYNIHRAAPASRQSGRVIVVEGYMDVVALAQAGFEDAVAPMGTALTEMQLEMLWRMVE 298 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + C+DGD AG+ AA RA+ ALP + R L + LP G DPD L+ ++G A E + Sbjct: 299 VPVLCFDGDAAGQKAAMRAIGRALPLLAPMRSLGIVTLPTGLDPDDLINEQGPGAMEKLL 358 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 Q M L FL+ + L++P+ +A L + + + ++ R+EL ++ Sbjct: 359 AQPMSLLDFLWQAERDAQPLASPEAKAGLKARLMAHVDTIEDRDIQALYRRELLDRF 415 >UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT Length = 590 Score = 310 bits (795), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 175/411 (42%), Positives = 246/411 (59%), Gaps = 12/411 (2%) Query: 5 IPRVFINDLLAR----TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 + R F N+L+ + DIV ++ V LKK+GKN+ CCPFHNEKTPSF+V EK FY+ Sbjct: 1 MSRYFENELIEQIKDANDIVSVVSEHVALKKRGKNYWGCCPFHNEKTPSFSVAPEKGFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGC A GNAI FLM + L FVE +E LA N+ +P EA P Q R +R + LY+ Sbjct: 61 CFGCHASGNAIKFLMELEHLTFVEALERLANRANIPLP-EAKLSPEQRARDERRKKLYEA 119 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 D TF+ L Q + YL+KRGL+ I F +GFAP GWD + + F + Sbjct: 120 SDLAATFFHNCLTQTSIGKVGLDYLKKRGLTQATIETFKLGFAPDGWDKLYRAFHDRGID 179 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L++ ++ N +G+ YD FR R+MFPI D +GRV+ FGGRV+ + TPKYLNSPE+ I Sbjct: 180 DSILLELNLVRKNQKGQFYDFFRNRIMFPIMDGKGRVVAFGGRVMDDSTPKYLNSPESSI 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ L+ +A + E + ++VEGYMDV++ +G+ VASLGT+ T DH +L Sbjct: 240 FEKGKLLFAFDKAYKSIREEKQAILVEGYMDVISAHNHGVTNVVASLGTAYTRDHGHILM 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R ++ YD D AGR AA RA+E L TD + +R + +PDG+DPD VR G +AF Sbjct: 300 RQAEEIVLAYDMDGAGRQAAARAIE--LLQNTDFK-VRVLAMPDGKDPDDYVRNHGGQAF 356 Query: 359 EARMEQAM-PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + + +A+ PL L SL+ D + +G+ + P I+ + +T R Sbjct: 357 KELVAKAVKPLDYLLSESLIKH-DTNDTEGKQAVMADVFPYIANIDSQTQR 406 >UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K3_DESAS Length = 599 Score = 305 bits (782), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 166/377 (44%), Positives = 227/377 (60%), Gaps = 13/377 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP+ I ++ R+DIV +I V LK++GKN+ CPFH EKT SF+VN EKQ +H Sbjct: 1 MRGVIPQEIIEEVRVRSDIVQVISEYVPLKRKGKNYIGYCPFHQEKTASFSVNREKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLM + + F E V +LA N+++P E S E+ +RQ +++ Sbjct: 61 CFGCHTGGDIFRFLMLQEAISFPEAVRKLAQTLNIDLPVELDP-KSLDEKRKRQAAWEIN 119 Query: 121 DGLNTFYQQS-LQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL----KRFGGN 175 D FY L +A AR YL KRG+SH++ F +G+APP WD++ K+ G + Sbjct: 120 DLAKNFYNYVLLNHKIAQPARDYLVKRGISHDIAQSFELGYAPPRWDSLALYLQKKHGID 179 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSP 234 E +++ G+ N GR YDRFR R++FPI ++ G+ IGFGGR L D PKYLNSP Sbjct: 180 YE---KMLELGLCAVNKSGRRYDRFRHRLIFPIINETGKTIGFGGRALDETDNPKYLNSP 236 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET F+KG+ LYGL+ A+Q E +V+EGYMDVV GI AVASLGTS T + Sbjct: 237 ETKYFNKGQTLYGLHLARQGIREKGFAIVMEGYMDVVTAHFAGIKNAVASLGTSLTLEQG 296 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +LL R T +VI YD D+AG A RAL+ G +R + +PDG+DPD +R G Sbjct: 297 KLLMRYTTDVILAYDSDQAGIKATLRALDILQKL---GFNVRVVTVPDGKDPDGFIRMAG 353 Query: 355 KEAFEARMEQAMPLSAF 371 AFE +E+A+ L + Sbjct: 354 TGAFENLIEKALDLVEY 370 >UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GBZ6_9FIRM Length = 604 Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 190/556 (34%), Positives = 284/556 (51%), Gaps = 28/556 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP F++++ R D+V+LI V+LK+ G+N+ CPFH EKTPSF+V+ +KQ +H Sbjct: 1 MEGNIPNEFVDEVRTRFDVVELISEYVQLKRSGRNYFGLCPFHGEKTPSFSVSQDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + + F E V+ELA +++P S +Q ++ L + M Sbjct: 61 CFGCGEGGNVFSFLMKMEGIPFPEAVKELARRAGMQLPSTVSSVAAQRAEQKKSRLREAM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +Y+ LQ A YLEKRGL+ E+I F +GFAP W+ V + + Sbjct: 121 AWADKYYRYWLQHQDGAKALHYLEKRGLTREIIESFGLGFAPNRWEAVKQFLRKKDFTER 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+DAG+L N + ++YDRFR R+ FPI RG I FGGR+L + PKYLNSPET +F Sbjct: 181 ELLDAGLLSDNPK-KTYDRFRNRITFPICSPRGETIAFGGRILDDGEPKYLNSPETPLFD 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LY ++ A++ + ++ EGYMDV+A Q G+ AVASLGTS T +LL Sbjct: 240 KGKNLYAIHLAREAIRREKQAIIFEGYMDVIAAHQAGVTNAVASLGTSLTEAQARLLRSQ 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V+ YD D AG+ A WR L+ + G ++ LP G DPD +R+ G +AF Sbjct: 300 AEEVVIVYDADAAGQAATWRGLQI---LKSAGCLVKVGRLPAGMDPDDYIRRHGGDAFRK 356 Query: 361 R-MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A+ L + SL Q L + R RL +++ V R + L Sbjct: 357 DIIGEALLLVDYQMASLAQQYSLDKDEDRIRLFNKISEILASVDNAMEREDYVTKAAAML 416 Query: 420 GILDDSQLERLMPKAAESGVSRP----------VPQLKRTT------MRILIGLLVQNPE 463 + + E L K + SRP P L+R T M+I I L + P Sbjct: 417 KLPATAVREELNKK--KQSASRPHSQTRKSSTIKPSLQRETAAQKAPMQI-IALWGRFPS 473 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 L + L+E P L + + + +LL+ + + TL +L + + Sbjct: 474 L--IEESAGQLEEEDFPA-ELIPAFLEAQKEKASFSAARLLDSLQEEKHRQTLSRLLIHE 530 Query: 524 DIADKNIAEQTFTDSL 539 + D+ IA++ D + Sbjct: 531 EY-DEKIAKKAIDDCI 545 >UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB91_BREBN Length = 624 Score = 304 bits (779), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 179/504 (35%), Positives = 272/504 (53%), Gaps = 44/504 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G F+N + A DIVD++ V+L+K G+ F CPFH+EK+PSF VN E+QF+H Sbjct: 1 MTGPTSDEFVNQVRAAVDIVDVVGEYVQLRKSGRAFLGLCPFHSEKSPSFNVNAERQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G+ FLM ++L F E + +LA + VP P Q+E + + +M Sbjct: 61 CFGCGAGGDIFSFLMKLEQLTFPEALHKLAERAGIAVP-----QPQQVEESPEKRMKHVM 115 Query: 121 DGLNTF----YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 +TF Y L + P A +YL KRG+S IA + IGFAP WD V ++ Sbjct: 116 QEAHTFVSRLYHYVLTKTPYGAEAMKYLAKRGMSEATIAEYQIGFAPDSWDFVTQQLTKR 175 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--------GNDT 227 +++ +++AG+L +D G+ +DRFR R+MFPI+D +G IGFGGR+L Sbjct: 176 GFSQELMVEAGLLARSDAGKIFDRFRGRIMFPIQDSQGNAIGFGGRLLQGSKHNSNQKSQ 235 Query: 228 PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGT 287 PKYLNSPE+ +F+K L+ L+ A+ + L+ EGY+DV++ Q G +A+LGT Sbjct: 236 PKYLNSPESLLFNKSATLFNLHRARPIIRKRKEALLFEGYVDVISAWQAGFTQGIATLGT 295 Query: 288 STTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPD 347 + T ++L R T +V+ CYDGD AG++A +A+ G +R LP G DPD Sbjct: 296 ALTEQQARILRRNTESVVLCYDGDAAGQEATSKAIHV---LQQAGLIVRVAPLPQGVDPD 352 Query: 348 TLVRKEGKEAFEAR-MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 +R+ G EAF + + QAMP++AF L Q + +ARL A+ +I+++ Sbjct: 353 DYIRQHGAEAFSQQVLLQAMPITAFRLKHLRSQFVIKDETDKARLIAKAVEIINELGSPV 412 Query: 407 LR-IYLRQ---ELGNKLGIL------------DDSQLERLMPKAAES------GVSRPVP 444 R +Y RQ E LG L + Q +++ P S +++ +P Sbjct: 413 ERDMYQRQLAEEYSLTLGDLKWESKRAYNQQKSERQRDKVTPAWNNSINNGKVTLAKTLP 472 Query: 445 QLKRTTMRILIGLLVQNPELATLV 468 T R+L+ +++N E+A V Sbjct: 473 PAYHTAERMLLYYMMRNEEIAARV 496 >UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum RepID=A3DDV1_CLOTH Length = 600 Score = 304 bits (779), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 160/448 (35%), Positives = 256/448 (57%), Gaps = 12/448 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I ++ DI+ ++ VKL+++GKN+ CPFH+EKTPSF+V+ KQ Y+ Sbjct: 1 MYKYYPEELIEEIRMSNDILSVVGEYVKLERKGKNYFGLCPFHSEKTPSFSVDPNKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+++E V+ LA +++P E + +I ++Q L ++ Sbjct: 61 CFGCGKGGSVIQFVMEVENLDYIEAVKMLAERARIQLP-EGDNEEERIIARKKQELLRIN 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ + L + R+YL KR +S + +F +G++P WD + + + Sbjct: 120 VEAARFFYEQLNDKKNLAPREYLTKRKVSGSIARKFGLGYSPEEWDALYNHLRKKGYDDE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+D+G+++ G YDRFR R++FPI D RG VIGFGGRVL N TPKY+NSPET +++ Sbjct: 180 ILLDSGLILKGKNGGYYDRFRGRIIFPIFDLRGNVIGFGGRVLDNSTPKYMNSPETLVYN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYGL A+ N+ R++VVEGYMDV++L Q+GI VASLGT+ T ++L + Sbjct: 240 KRKNLYGLNFAK--NSGQKRIIVVEGYMDVISLFQFGIINTVASLGTALTESQGRILKKY 297 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +I YD D AG A R L+ + D G ++ + +P+G+DPD V+K G EAF Sbjct: 298 AEEIIISYDADTAGMAATMRGLDL----LNDIGCNVKVLIIPEGKDPDEFVKKNGPEAFN 353 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E A+ L + +L +D +T +G+ A L+S++ R +++ + Sbjct: 354 KLVENALSLVEYKIKALKSTIDTNTTEGKINFLNKAADLLSKIDNNMEREMYIKKISKEY 413 Query: 420 GILDDS----QLERLMPKAAESGVSRPV 443 I +S L+R+ PK ++R + Sbjct: 414 DISQESIYAEILKRIKPKTVYKPLTRTL 441 >UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR5_ERYLH Length = 625 Score = 303 bits (777), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 163/413 (39%), Positives = 238/413 (57%), Gaps = 7/413 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 ++++L AR + +I KL++ G+ + ACCPFHNEKTPSFTV+ EK FYHCFGCGAHG Sbjct: 6 WLDELRARVTLSSVIMRTTKLQRAGREWKACCPFHNEKTPSFTVSDEKGFYHCFGCGAHG 65 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + I ++ + L+F++ V+ELA LEVP Q E+ R +L + + ++ Sbjct: 66 DVIRWMTDQRGLQFMDAVKELAQEAGLEVPAPDPRAAQQAEK--RASLIDVTEASQRWFV 123 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 + L+ AR YL RG S+ VI F G+AP D+ G L+++GM Sbjct: 124 EQLRGAEGARARDYLASRGFSNGVIREFGFGYAP---DSKQAMGSGVGFEDAMLVESGMR 180 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHKGRQLY 246 + + G YDRFR+R+M PI+D RGRVI FGGR+L + KYLNSP+T +F KGR LY Sbjct: 181 IETEDGSKYDRFRDRLMLPIQDARGRVIAFGGRILDKRDGVAKYLNSPDTPLFDKGRTLY 240 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L+ A + + R++VVEGYMDV+ALA GI AVA LGT+ T I++L+R I Sbjct: 241 NLHRAGPASRQTGRIVVVEGYMDVIALANAGIEDAVAPLGTALTERQIEMLWRMVERPIL 300 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 C+DGD AG+ AA RA++ ALP + L + LP G DPD L+ + G +A E + + Sbjct: 301 CFDGDAAGQRAAMRAIQRALPLLRPAHSLGIVRLPAGLDPDDLINQRGAQAMEDILAKPG 360 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 L L+ L +P+ +A L + + + ++ R+EL ++ Sbjct: 361 SLLDTLWQFERDAEPLDSPEAKAGLKARLMAHVDAIGDADIKALYRRELLDRF 413 >UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7C0_DESRM Length = 604 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/402 (39%), Positives = 233/402 (57%), Gaps = 4/402 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP I ++ RTDIV++I + ++K+GKN+ A CPFH EKTPSF +N E+Q +H Sbjct: 1 MAGRIPDSVIEEIRQRTDIVEVISRFIHVEKRGKNYLALCPFHQEKTPSFNINPERQMFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + L F E+V L +EVP E S ++++ ++ +++ Sbjct: 61 CFGCGVGGNVFKFLMMVEGLSFPESVRSLGTKLGIEVPEEI-SPKERVKQGKKDRAFKIY 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY L + + A +YLE R L+ + F +GFAP GWD++ + + Sbjct: 120 GLARDFYHFLLTKEIGIGAIRYLESRNLTDKTRETFELGFAPLGWDSLTGFLTAKGISGE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L G++ + G YDRFR R+MFPI D +GRV+GFGGR +G D PKYLNSPE + F+ Sbjct: 180 ELTKLGLVQKKESGGYYDRFRNRIMFPIWDNQGRVVGFGGRTMGEDNPKYLNSPEGEYFN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGL+ A++ E +++EGYMDVV+ Q+G+ AVASLGT+ T D ++L Sbjct: 240 KGQLLYGLHIARKGIREQGYAVLMEGYMDVVSTYQHGVTNAVASLGTAFTRDQGKILMMY 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+ YD D AG AA RA + G Q+R + +DPD ++ G E +++ Sbjct: 300 THDVVIAYDADTAGIKAATRAADILQEL---GCQVRIATIVGAKDPDEYIQSHGLEGWQS 356 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 ++ AMPL + + L + R+ LP ++ V Sbjct: 357 IIDHAMPLVQYKLLQAAQKHGLQNAGAKQRILREVLPNLASV 398 >UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID=C9R940_AMMDK Length = 611 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 160/379 (42%), Positives = 233/379 (61%), Gaps = 6/379 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G +P F+ ++L RTDIV L+ V+LK+QGKN+ CPFH E+TPSFTV+ EKQF++ Sbjct: 1 MRGYVPPEFVKEVLDRTDIVALVGEYVRLKRQGKNYVGLCPFHAERTPSFTVSPEKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+A+ FLM +KL+F+E +E LA L +P ++ P+ + R + + + Sbjct: 61 CFGCGVGGDALKFLMLQEKLDFLEALERLALRAGLSLPSQS-RDPAWLARRRELEEGEEL 119 Query: 121 DGLN-TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + L+ F+ SL AR+YLE+RG+S E+ RF++G+APP + +L+ + Sbjct: 120 NRLSLEFFTASLWGERGEPARRYLEERGVSEEIARRFSLGYAPPEEEALLRYLRARGITK 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDI 238 ++ + G+ GR DRFR R++FPI D +G+V+GFGGR L + PKYLNSPET + Sbjct: 180 EAAVKWGLASRTSAGRVVDRFRGRLIFPIFDPQGKVVGFGGRALVSYLQPKYLNSPETPL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K +LYGLY+A+ ++VEGY+D + L Q+G YAVASLGTS T + ++LL Sbjct: 240 FNKRNELYGLYQAKDAIRAAGFAVLVEGYLDAITLHQFGFGYAVASLGTSLTQEQVRLLS 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T V YD D AG A WR L+ G ++ + LP G+DPD +R G A+ Sbjct: 300 RYTGKVYIAYDSDTAGEAATWRGLDI---LAGAGLEVLVVELPQGKDPDEFLRALGPAAW 356 Query: 359 EARMEQAMPLSAFLFNSLM 377 EA + A+PL + LM Sbjct: 357 EASLASALPLLEYKGKKLM 375 >UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 RepID=B8EK34_METSB Length = 647 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 164/414 (39%), Positives = 233/414 (56%), Gaps = 4/414 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++D+ AR + +++ RVKL + G+ + PF+ EKTPSF VN +K + Sbjct: 2 RFSPSFLDDVKARLPVSEVVRRRVKLIRAGREWKGLSPFNTEKTPSFFVNDQKMAWFDLS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G +GN DF+M + L F E VE LAA VP S ++ + +R L++ + Sbjct: 62 AGKNGNIFDFVMETEGLSFREAVERLAAEAG--VPLPQASPEAEAQEQKRAGLHETLGLA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ L P AR YL R LS E F IG+AP + G R ++I Sbjct: 120 ADFFCAQLAGPSGGKARDYLTGRALSAEAQKNFRIGYAPADKFALRDHLAGKGVARDTMI 179 Query: 184 DAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHK 241 +AG+L+ D YDRFR+R++FPI D+ GR I FGGR L + PKYLNSPET +FHK Sbjct: 180 EAGLLIHGEDIAVPYDRFRDRIIFPICDRSGRPIAFGGRALSAEAQPKYLNSPETTLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ + A+ +R++VVEGY+DV+AL++ G VA LGT+ T D +LL++ T Sbjct: 240 GGVLFNHHRARTAAHSSDRIIVVEGYVDVIALSEAGFAETVAPLGTALTPDQAELLWQMT 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C+DGD+AGR AA+RA++ ALP + GR LRF LP+G+DPD L+R G A Sbjct: 300 AEPILCFDGDKAGRKAAYRAIDMALPLIGAGRSLRFALLPEGQDPDDLIRSAGPHAMADV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 + QA+PL+ ++ D STP+ RA + ++ ETLR Y R E Sbjct: 360 LSQALPLADLIWRRETEGADFSTPERRAGFERRLDEIAQEIRDETLRRYYRDEF 413 >UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5_9RHOB Length = 675 Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 162/411 (39%), Positives = 239/411 (58%), Gaps = 9/411 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARV---KLKKQ-GK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F++++ R + D++ +V K K Q GK + A CPFH+EKT SF V+ K +Y Sbjct: 3 LPTGFLDEIRNRLSLADVVGRKVLWDKRKSQPGKGDLWAPCPFHHEKTASFHVDDRKGYY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC G+AI F+ + + F+E +E LA +E+P + +R R L ++ Sbjct: 63 YCFGCHEKGDAISFVQKTENVGFMEAIEILATEAGMEMPARDPQAKQKADR--RTILGEV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ F++ L+ AT AR YL KRGL RF IGFAP GWDN+ G + Sbjct: 121 MEQAVQFFRFQLKTQAATDARAYLAKRGLDAGTQERFEIGFAPAGWDNLRLALTGKGVSV 180 Query: 180 QSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETD 237 + L+ G+ T+D+GR YD FR R+MFPIRD RGR I FGGR + +D KYLNSPET+ Sbjct: 181 EHLVACGLSKTSDKGREPYDVFRNRIMFPIRDARGRCIAFGGRAMDPDDNAKYLNSPETE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F K R LY L A++ L+V EGYMDV+AL++ G AVA LGT+ T + + + Sbjct: 241 LFDKSRNLYNLRAAREATGRGQPLVVAEGYMDVIALSEAGFKGAVAPLGTAVTENQLHAM 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + I DGD+AG AA+R ++ ALP + G+ LRF +PDG+DPD L+R +G +A Sbjct: 301 WRLSPEPIIALDGDKAGLRAAYRVIDLALPLLEAGKGLRFALMPDGKDPDDLIRSDGPDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + ++ A+P+ L+ +P+ RA L + + +V +LR Sbjct: 361 VQTCLDAALPMVDLLWQQETEGRSFDSPERRAALDKVLRERVQRVKDPSLR 411 >UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTY2_DESHD Length = 614 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 174/428 (40%), Positives = 240/428 (56%), Gaps = 17/428 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + ++ R+DIVD I V+L+++GKN+ CPFH EKTPSFTV +KQ ++ Sbjct: 1 MDYRIPEEIVEEVRLRSDIVDTISEYVRLQRKGKNYLGLCPFHAEKTPSFTVTPDKQIFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN FLM + FVETVE LA H + +P E P + E+ R+ ++ + Sbjct: 61 CFGCHTGGNVFSFLMKKENWNFVETVEHLAQKHGIVLP-EKELSPREKEQQTRRRRWEEI 119 Query: 121 DGLNT--FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 T F++ L +P RQY ++RG+ E I +F +G+AP WD +L+ + Sbjct: 120 HDWATGYFHEVLLHRPEGEPGRQYFQQRGMDEETIKQFRLGYAPDRWDGLLEALSARGVS 179 Query: 179 RQSLIDAGMLVTNDQ--GRS---YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233 Q L AG+ + DQ GRS YDRFR+RV+F I D R + IGFGGRVL + TPKYLNS Sbjct: 180 PQELAQAGLALERDQSEGRSRGFYDRFRKRVIFAILDSRHKTIGFGGRVLDHSTPKYLNS 239 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PET F+KG LYG++ A Q E L+ EGYMDV+AL + G AVASLGT+ T D Sbjct: 240 PETAFFNKGHHLYGMHRAHQGIREHGFALLAEGYMDVIALQKAGFKNAVASLGTALTRDQ 299 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRK 352 +L+ R T V+ YD D+AG A RA E + D G ++ + L +DPD ++ Sbjct: 300 AKLIHRYTGRVVVVYDSDQAGTQATLRAGEL----LQDMGFRVDILRLSGAKDPDEYLKT 355 Query: 353 EGKEAFEARMEQAMPLSAFLFN-SLMPQVDLSTPDGRARLSTLALPLI---SQVPGETLR 408 G E F + QA P F + + + LS P+ + LA ++ S V E Sbjct: 356 FGVEEFNKALAQAEPYIQFKYQVHVQTKPTLSAPEKAELVRELAPDIVKVQSPVEREGYE 415 Query: 409 IYLRQELG 416 +L ELG Sbjct: 416 RFLSLELG 423 >UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1N8_GLUDA Length = 619 Score = 298 bits (764), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 167/391 (42%), Positives = 228/391 (58%), Gaps = 14/391 (3%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 F+ +L ART I +I R KL + G+N+ ACCPFH EKTPSF V + +HCFGCGAH Sbjct: 6 AFLEELRARTPIASVIGRRTKLVRSGRNWKACCPFHGEKTPSFYVYDDH--FHCFGCGAH 63 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGLNTF 126 G+ I F+M + F E V ELA LEVP + P + E QR + L ++D + Sbjct: 64 GDVISFVMQSEGRSFPEAVAELAGEAGLEVPR---ASPREREAEQRARGLSDVLDLVQAA 120 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 + + L P + YL RGLS E IA F +G++ G +L + + L AG Sbjct: 121 WVRRLHAPEGRAGLAYLRGRGLSDETIAGFGLGWSGDGRGGLLNELAPHGVTPEMLAQAG 180 Query: 187 MLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 ++ ++ GR + F RV FPIRD+RG ++ FGGR+LG+ PKYLN PET +F K R L Sbjct: 181 LMRVDEDGRPKGELFFNRVTFPIRDRRGSLVSFGGRILGDGQPKYLNGPETALFSKRRTL 240 Query: 246 YGL-------YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +G+ A+ A P L+VVEGYMDV+AL Q G AVA LGT+ T++ ++ L+ Sbjct: 241 FGMDRARAALRTARPRGAPPVELVVVEGYMDVIALHQAGFPGAVAPLGTALTSEQMEALW 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + I C+DGD AG+ AA +A ETALP + R LRF LP+GEDPD+L+R +G A Sbjct: 301 QMAAAPILCFDGDGAGQRAAVKAAETALPLLDINRTLRFCALPEGEDPDSLLRGQGSGAV 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRA 389 A +E A P+ LF+ L V P+ RA Sbjct: 361 AALLEGARPIGHVLFDLLTQGVRDPGPEQRA 391 >UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK Length = 646 Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 163/428 (38%), Positives = 243/428 (56%), Gaps = 14/428 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARV-----KLKKQGKNFHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I +I RV K K +F CCPFH EKTPSF + K + Sbjct: 3 RFPPDFLDEIRTRLPISTVIGQRVTFDPRKSKSSRGDFWCCCPFHGEKTPSFHCDDRKGY 62 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ +FL D L+F E+VE LA + +++P S Q+ LY Sbjct: 63 YHCFGCGVSGDIFNFLCELDGLQFSESVERLADLAGMKLP--VLDLQSYKREMQKADLYD 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M F+Q +L ARQYL++RG++ E+ RF IGFAP + + + Sbjct: 121 VMAIATDFFQNNLYDKGGAQARQYLDERGITPELAKRFRIGFAPAKRTALKEVLSARGVS 180 Query: 179 RQSLIDAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPET 236 + + D G+L++ D YDRFR R++FPI+D RGRV+ FGGR L D KYLNSPET Sbjct: 181 VKQMEDCGLLISGEDIAVPYDRFRNRIIFPIQDLRGRVVAFGGRTLDQDVQAKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNA-----EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 +FHKG LY A+++N+ + +LVVEGY+DV++L + G VA LGT+ T Sbjct: 241 VLFHKGNILYNAASARKNNSFTSGEKAPSILVVEGYIDVISLIKAGFEKVVAPLGTALTE 300 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 I+LL++ +++ I C+DGD AG AA+R + LP + G +RF+ LP G+DPD +VR Sbjct: 301 AQIELLWKMSSDPILCFDGDDAGLKAAFRVADRVLPLLKAGLSVRFILLPQGQDPDEIVR 360 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G + F++ +++++PL L+ TP+ RA L I ++ E++R Y Sbjct: 361 VGGAKFFDSYVQKSIPLIELLWLRATYGKRFETPEERAALERELKQEIFKIKDESVRRYY 420 Query: 412 RQELGNKL 419 Q++ +L Sbjct: 421 LQDIKKRL 428 >UniRef50_A4JW69 DNA primase n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JW69_BURVG Length = 426 Score = 297 bits (761), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 162/399 (40%), Positives = 240/399 (60%), Gaps = 11/399 (2%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F+ + TD+ LI+ VKLK+ G++F ACCPFH EKTPSF V+ +K Y C+GCGA G Sbjct: 11 FLERIRGETDLPALIERDVKLKRAGQDFVACCPFHEEKTPSFRVSADKNTYRCWGCGARG 70 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQLMDGLNTFY 127 +AI+++ N L F + V LA + + +P E S + +R + LYQ + + Sbjct: 71 DAIEWMRNKHHLSFQDAVVHLAGVSGIPLPVEERDSDEDKAQRKRLAGLYQALKEAARVF 130 Query: 128 QQSLQQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 + L + + +AR YLE KRGLS E I RF +G G V++ GG+ +R++L+ +G Sbjct: 131 SRGLAK--SPAARAYLEQKRGLSAETIERFGLGVVAKG---VVELLGGST-SREALLGSG 184 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL---GNDTPKYLNSPETDIFHKGR 243 + D G YDRFR R+MFPI ++ G ++GF GR + + TPKY+N PET+IFHKGR Sbjct: 185 LAAQRDDGEIYDRFRHRIMFPIHNESGNLVGFAGRSMIEKPDKTPKYVNCPETEIFHKGR 244 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LY L+ A+ ++VEGY DV++L Q G AVA +GT+ T ++ L + Sbjct: 245 ELYALHLAKPAIRSGRVAVIVEGYFDVISLHQAGDERAVAPMGTALTNLQVRRLLVHADT 304 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ +DGD AGR AA A L M DG+ RF+FLP+GEDPD+ VR G EA+ A E Sbjct: 305 IVFAFDGDAAGRKAALGAAAVLLDEMKDGKTARFLFLPEGEDPDSFVRAHGLEAWHAATE 364 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 QA PLSAFL + + +D P+ + + + A +++++ Sbjct: 365 QAAPLSAFLADYVAHGLDRDVPESQVKAAEKAKAILARI 403 >UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB Length = 596 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 156/422 (36%), Positives = 239/422 (56%), Gaps = 9/422 (2%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DIVD++ +VKLK+ G+N+ CPFH+EKTPSF+V+ +KQ Y CFGCG GN I F+M Sbjct: 18 NDIVDIVSEKVKLKRTGRNYSGLCPFHHEKTPSFSVSQDKQIYKCFGCGEAGNVITFVMK 77 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVA 136 FVE V+ LA N+ + ++ + + LY + ++ ++L Sbjct: 78 TKNFSFVEAVKYLADKVNITIDDNKDKYYAK-NKEKYDKLYSMNVEAARYFFRNLDSN-- 134 Query: 137 TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRS 196 + A++Y RG++ + + RF +G+A W +L LI+AG++V ++ Sbjct: 135 SKAKKYFLDRGINQKTMRRFGLGYAKDDWRQLLSFMKSKGYTELELIEAGLIVQKNKA-V 193 Query: 197 YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNA 256 YDRFR RV+FP+ D +G+VIGFGGRVL + PKYLNSPET IF KG LYGL A ++N Sbjct: 194 YDRFRNRVIFPVFDYKGKVIGFGGRVLDDSKPKYLNSPETKIFKKGTNLYGLNFAVKNNI 253 Query: 257 EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRD 316 + +++VEGYMD ++L QYGIN VASLGT+ T D +LL R + V+ YD D AG+ Sbjct: 254 -GDTIIIVEGYMDCISLHQYGINNVVASLGTALTKDQAKLLKRYASKVVISYDADTAGQA 312 Query: 317 AAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSL 376 A R + G ++ + +PDG+DPD VRK GKEAF +E A+ + + N Sbjct: 313 ATLRGFDILREA---GFDIKIIKIPDGKDPDEFVRKNGKEAFMRLVENAVSIIDYRINRA 369 Query: 377 MPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAE 436 V+L + + +I ++ +Y+++ + +K GI + + + + + Sbjct: 370 FENVNLKDSESVIKYVKDISEIIEELDPVEKDVYIKK-ISDKTGIREQAIYDLISTDIQK 428 Query: 437 SG 438 SG Sbjct: 429 SG 430 >UniRef50_Q1GEP2 DNA primase n=17 Tax=Rhodobacterales RepID=Q1GEP2_SILST Length = 669 Score = 295 bits (756), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 158/419 (37%), Positives = 244/419 (58%), Gaps = 11/419 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARV----KLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F+++L R + D++ +V + + GK + + CPFH+EKT SF V+ K FY Sbjct: 3 LPPGFLDELRTRISLSDVVGRKVMWDQRKSQPGKGDMWSPCPFHHEKTASFHVDDRKGFY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT-LYQ 118 +CFGC A G+A+ F+ + + F+E VE LA LE+P P E+ R+T L + Sbjct: 63 YCFGCHAKGDALKFVQETENVSFMEAVEILAGEAGLEMP---KRDPKAAEKQDRRTQLAE 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M+ +++ L+ A+ AR YL +RGL + R+ IGFAP GW N+ G Sbjct: 120 VMEQAVKYFRLQLKTQAASEARAYLARRGLDAAALDRWEIGFAPDGWQNLWDALKGKDIA 179 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPET 236 ++ AG+ +++G+ YD FR R+MFPIR+ RGR I FGGR + ND KYLNSPET Sbjct: 180 DDLILGAGLAKPSNKGKKPYDVFRNRIMFPIRNARGRAIAFGGRAMDPNDNAKYLNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 ++F KGR LY A+ + + L+V EGYMDV+AL++ G AVA LGT+ T + + L Sbjct: 240 ELFDKGRNLYNHGPARAASGRGSTLIVAEGYMDVIALSEAGFQSAVAPLGTAVTDNQLHL 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L+R ++ + DGD AG AA R ++ ALP + G+ LRF +P+G+DPD L+R EG E Sbjct: 300 LWRMSDEPVIALDGDTAGLRAAMRLIDMALPLLEAGKSLRFAIMPEGKDPDDLIRAEGPE 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 A +A ++QA+P+ L+ +P+ +A L I + ++R++ ++ Sbjct: 360 AVQAVLDQAIPMVQLLWRRETEGRVFDSPERKAALDKSLREKIKLIRDPSIRLHYANDI 418 >UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK00_DESAH Length = 602 Score = 294 bits (753), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 170/449 (37%), Positives = 254/449 (56%), Gaps = 18/449 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ I++++ +DIV++I V LKK G+N+ CPFH+EK+PSF+V+ EKQ +HCFGC Sbjct: 3 IPQEKISEIINASDIVEVISEVVLLKKSGRNYFGLCPFHSEKSPSFSVSPEKQIFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A GN FLM + + F E V+ AA +N+ V G ER +R L + + LN Sbjct: 63 SAGGNVFSFLMRHHGISFPEAVKMAAARYNIVVEM----GSVDPERKRRIALKEELLRLN 118 Query: 125 TFYQQSLQ-----QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 T + + P A AR YL RG++ E I F++G+A WD++++ F R Sbjct: 119 TAVMKHYKVLLTDSPGAQGARNYLRDRGITPETIDTFSLGYAEDRWDDMVRFFRHLKLGR 178 Query: 180 QSLIDAGMLV--TNDQGRS---YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 +G+++ +D+G YDRFR R++FPI D +V GFGGRV+ + PKYLNSP Sbjct: 179 NLAEQSGLVLERASDRGGKKGYYDRFRNRIVFPIVDTNMQVAGFGGRVMDDSMPKYLNSP 238 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET ++ KG+ LYGL+ A+Q + + + +VEGY D ++L Q GI VASLGT+ T DH+ Sbjct: 239 ETPVYSKGQILYGLHLAKQYCRQVDCVYIVEGYFDFLSLFQNGIKNTVASLGTALTVDHV 298 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 + L + +D D AG +AA R + T + +G +R + LP G DPD+ V EG Sbjct: 299 RRLKGFATRAVLVFDSDNAGINAAKRCVST---FAAEGVDVRILVLPKGHDPDSFVNSEG 355 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +AF+ +QAM + FL ++ M + S A L + LPL +Y+R Sbjct: 356 ADAFKRAADQAMSVMDFLTDTAMKKHGSSVEGRIAVLEEMKLPLARIEDSAARSLYVRG- 414 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRPV 443 L +LGI + + LER+ + G +PV Sbjct: 415 LAEQLGIDESAVLERVRNVVSTQGGGQPV 443 >UniRef50_B8H372 DNA primase n=8 Tax=Caulobacteraceae RepID=B8H372_CAUCN Length = 643 Score = 294 bits (752), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 166/422 (39%), Positives = 241/422 (57%), Gaps = 17/422 (4%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F+ +L +R D++ VKL++QG+ + PF EK+PSF VN EK FYHCF G HG Sbjct: 7 FLEELKSRLRPSDVVGKTVKLRRQGREYAGLSPFTKEKSPSFFVNDEKGFYHCFSSGKHG 66 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + I FL ++L F E VE LAA + +P E ++ E +R +L M+ +++ Sbjct: 67 DIISFLQETERLTFAEAVERLAAEAGMSLP-EVDPRAAR-EEQKRSSLGDWMELAAAWFE 124 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAP---PGWDNVLKRFGGNPENRQSLIDA 185 L++PV +AR YLEKRGL +RF IGFAP G + L G P + L+DA Sbjct: 125 SELRRPVGQTARAYLEKRGLPESEWSRFRIGFAPNNRTGLKDYLIAKGAKPGD---LVDA 181 Query: 186 GMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGR 243 G+L+ D G YDRFR+R++FPI D RG+V+ FGGR + KYLN PET +FHKGR Sbjct: 182 GVLIAPEDGGAPYDRFRDRIIFPIADSRGKVVSFGGRAMDPAARAKYLNGPETSLFHKGR 241 Query: 244 QLYGLYEAQ------QDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 LYGL+EA+ Q E ++VVEGYMDV+A + G+ AVA++GT+ T + ++ L Sbjct: 242 VLYGLFEARKILHAGQSGGEKPPMVVVEGYMDVIACQRAGVP-AVAAMGTALTEEQMEGL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R C+DGD+AG+ AA RA++ ALP + GR F G+DPD ++R++G A Sbjct: 301 WRLHPTPTLCFDGDKAGKRAADRAIDRALPLLKPGRSFLFSMPVGGKDPDDVLREQGPAA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +A++ P LF TP+ R L L + + + L ++EL + Sbjct: 361 LKAQVSDTKPFVQALFEREKEVEPFDTPEQRTNLKVRLRTLAATIADKDLAHAYKEELLD 420 Query: 418 KL 419 +L Sbjct: 421 RL 422 >UniRef50_Q0AMR5 DNA primase n=2 Tax=Hyphomonadaceae RepID=Q0AMR5_MARMM Length = 613 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 168/424 (39%), Positives = 241/424 (56%), Gaps = 7/424 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ FI+++ AR DLI V LK+QG+ F PF E++PSF VN EK+FYHCF Sbjct: 2 RLNEDFIDEIKARVRPSDLIGRSVPLKRQGREFVGLSPFKKERSPSFFVNDEKRFYHCFA 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ +L + L F+E E LA L +P SQ + R++L + M Sbjct: 62 SGKHGDIFTWLEEMEGLSFMEAAERLAGEAGLRLP--EPDPESQQKTQHRKSLVEWMGSA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ ++L+ P A AR YL+ RGL+ E R+ IG+AP + LI Sbjct: 120 QAFFLRALRSPQAEEARLYLKSRGLTGEDCVRYGIGYAPDSRTALKDELVTAGAPVSDLI 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKG 242 + G+L+ D G YDRFR+R+ FPI D R R++GFGGR L + KYLNSPET IFHKG Sbjct: 180 ECGLLIEPDSGSPYDRFRDRITFPIHDPRNRLVGFGGRALSKEARAKYLNSPETPIFHKG 239 Query: 243 RQLYGLYEAQQDNAEPNR----LLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 LY EA++ ++P + L+V EGY+DV+AL++ G+ + VA LGT+ T + IQLL+ Sbjct: 240 SVLYRYPEARKAASDPKQDIRGLIVAEGYLDVIALSRAGLEHGVAPLGTAITEEQIQLLW 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 RA + C DGD AGR AA++A + ALP + G+ LRF F+PDG+DPD ++R+EG A Sbjct: 300 RAGGEPVMCLDGDSAGRAAAFKAADRALPLLQPGKTLRFAFMPDGKDPDDILREEGANAL 359 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + L+ ++ + L PD RA L+SQ+ +R ++E + Sbjct: 360 RAVFRETRSLADLIWEREVLVEPLDDPDRRAGFRRRIRALVSQITDGDIREEYKREFDQR 419 Query: 419 LGIL 422 + L Sbjct: 420 MDAL 423 >UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PRIM_BACHD Length = 599 Score = 293 bits (750), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 149/361 (41%), Positives = 213/361 (59%), Gaps = 7/361 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I ++ DI+D+I V+LKKQG+N+ CPFH E TPSF+V+ +KQ YH Sbjct: 1 MNQRIPQETIEEIRRSVDILDVIGEYVQLKKQGRNYIGLCPFHGENTPSFSVSPDKQLYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA FL + FVE VE LA N+ +P PS + + L + Sbjct: 61 CFGCGAGGNAFTFLEQIEGFTFVEAVETLAKRANVVLPERVS--PSVKQNRDEELLISIQ 118 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ L + R YLE+RG + E I F IGFAPP WD + + Sbjct: 119 EFAAKFFHHVLMLTEEGKAGRTYLERRGFTKEQIEHFQIGFAPPHWDALTNVLAKRDVDL 178 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + ++G+LV + G+ YDRFR RV+FPIR+ +G+++ FGGR LG+D PKYLNSPE+ I Sbjct: 179 KKAGESGLLVERESDGKRYDRFRNRVIFPIRNGKGKIVAFGGRTLGDDKPKYLNSPESPI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ LYG Y+A+ + N ++ EGY+DV+A + G+ VA+LGTS T + +++ Sbjct: 239 FQKGKLLYGFYQARPAIRKENEAVLFEGYVDVIAAWKAGVTNGVATLGTSLTEEQARMIR 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C DGD AG +A +R+ + +G ++ +PDG DPD ++K G E F Sbjct: 299 RNAETVIICNDGDAAGAEATFRSADL---LQQEGCHVKVAMIPDGLDPDDYIQKYGAERF 355 Query: 359 E 359 + Sbjct: 356 K 356 >UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXH2_HALOH Length = 599 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 158/430 (36%), Positives = 247/430 (57%), Gaps = 13/430 (3%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F+++L DIVDL+ V LKK GKN+ CPFH EKTPSFTVN E+QF++CFGCG G Sbjct: 8 FLDELKGSLDIVDLVSDYVDLKKVGKNYVGLCPFHQEKTPSFTVNPERQFFYCFGCGVGG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQLMDGLNTFY 127 + I FLM + + F E+V+ LA +EVP G P ++ +R+ L+++ FY Sbjct: 68 DVISFLMEIENITFKESVKMLARRSGMEVP---GDDPRHRQQLREREKLFKINHLTAKFY 124 Query: 128 QQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L+ A YL+KRG + + I +F +G+AP WD +LK G L+ AG Sbjct: 125 HYLLLETDQGLKAINYLKKRGFTKKDIKKFGLGYAPDRWDGLLKFLTGKGFEEGELVKAG 184 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQ 244 +++ ++ YDRFR+R++FPI + RG V+ FGGR++ +D PKYLNSPET +F+KG+ Sbjct: 185 LVLLSNNNNYYDRFRDRLIFPIFNSRGEVLAFGGRLIDSDESQPKYLNSPETPVFNKGKN 244 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ + + + ++++EGY DV+ Q GIN VASLGT+ T++ +L+ R +N Sbjct: 245 LYGLNWAKHEMRKSSEVIIMEGYTDVLRAHQMGINNVVASLGTALTSEQARLIARYSNLA 304 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 YD D AG A R L+ G ++ + LP DPD +RK+G + F +E+ Sbjct: 305 YISYDADTAGTKATLRGLDIL---KNAGLNVKVVDLPQDSDPDEYLRKKGVDEFYTLLEE 361 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI--- 421 A+ L F + +DL+ G+ + + +++ + R Q + +K + Sbjct: 362 AVDLVEFKIKQGLENIDLNNVQGKIEGTRKLVKILATLEDRIEREIYIQNVSDKFNLDPE 421 Query: 422 LDDSQLERLM 431 + S++E+L+ Sbjct: 422 ILKSEVEKLI 431 >UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6TSH0_ALKMQ Length = 611 Score = 291 bits (744), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 157/427 (36%), Positives = 239/427 (55%), Gaps = 8/427 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I+++ A+ +I D+I + LK+ G + A CPFHNEKTPSF V+ EKQFY Sbjct: 1 MEKGFPEELIDEIKAQNEITDVISQYISLKRIGSSNKALCPFHNEKTPSFNVSTEKQFYK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+F+E ++ LA N+E+P + S E R +++ Sbjct: 61 CFGCGEGGDVIQFIMKMENLDFMEAIKMLAQRANIEIPEKDQSLEVAEEMKLRNLFWEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y L + + A YL +RGL + I F +GFAP W +++ + + Sbjct: 121 KKAAKYYYHCLTKE-KSIALGYLSERGLISKTINTFGLGFAPNEWQGLIQHLTQEGYDLK 179 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+++ +Q YDRFR R++FPI D RG V+GFGGRVL + PKYLNSPET +F Sbjct: 180 DIEKCGLIIPKKEQSGYYDRFRNRIIFPIFDIRGNVVGFGGRVLDDSLPKYLNSPETKLF 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K R LYGL A++ +L++VEGYMDV+ L Q G VA+LGTS T +H Q+L R Sbjct: 240 NKSRILYGLNIARK-YMTTRQLILVEGYMDVIPLYQQGFKNVVAALGTSLTKEHAQVLKR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVRKEGKEAF 358 ++VI C+DGD AG A R++E + +G ++ M +P G DPDT ++ +GKE F Sbjct: 299 YCDDVILCFDGDEAGIKATLRSIEI----LKNGDFNIKVMMMPKGVDPDTYIQSKGKEGF 354 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + + A+ + + + +GR L+ +I Q+ + Q++ + Sbjct: 355 QRAINAALNVVDYQIMLAKEKYPQDKVEGRVNLARDIAKIIKQIKSPIEKEAYIQKVSQE 414 Query: 419 LGILDDS 425 GI D+ Sbjct: 415 TGINQDA 421 >UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBL4_DESAA Length = 599 Score = 290 bits (741), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 176/493 (35%), Positives = 266/493 (53%), Gaps = 26/493 (5%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I+ + +IVD+I + LKK G NF CPFH EKTPSF+VN ++QF+HCFGCG G+ Sbjct: 10 ISHVRNSVNIVDVISDYMVLKKAGNNFVGLCPFHAEKTPSFSVNPDRQFFHCFGCGEGGD 69 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 DF+M + L F E + LAA +E+ + Q +R LY D F+ + Sbjct: 70 VFDFVMRQNNLTFPEALASLAARAGIELAPRKMTPQQQKIVAERDALYAANDFARDFFVK 129 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF---GGNPENRQSLIDAG 186 SL P A+ AR+YL+KR + EV+ F +GFAP W L F G P +R AG Sbjct: 130 SLNAPQASQAREYLKKREMPQEVLETFMLGFAPDEW-RALSGFLQGKGVPSHRAE--KAG 186 Query: 187 MLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 +LV + G + YDRFR R++FPI D GR+ GFGGRV+ + PKYLNSP+T I+ K R L Sbjct: 187 LLVHKEGGGNVYDRFRNRIIFPIHDISGRIAGFGGRVMDDALPKYLNSPQTPIYDKKRML 246 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGLY+A+Q+ + +VEGY DV+AL +GI AVA+ GT+ + DH++++ V+ Sbjct: 247 YGLYQARQECRKTGVAFMVEGYFDVLALYAHGIRNAVATCGTALSPDHVRIIKGYAKKVV 306 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +D D AG +AA ++L + + Q + + LP G DPD+ VR G + F E Sbjct: 307 LVFDSDTAGINAARKSLPL---FEAEKVQAKVLVLPAGHDPDSFVRDFGAKDFLEAAENR 363 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVP-GETLRIYLRQELGNKLGILDD 424 + FL S + + LS +G+A + ++ V G T +Y++Q + KLG+ + Sbjct: 364 QDMIPFLMESAIARHGLSI-EGKANVVAEIKEQVAAVSDGVTRSLYIKQ-IAEKLGVDEA 421 Query: 425 SQLE----------RLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP---L 471 + L+ + +P ++P ++ ++V+ PE A V + Sbjct: 422 AVLDAVRDAAKTRPKRLPGTVHEEQAKPAEPAPDRMETAILQMMVRCPECAPKVAEKRLI 481 Query: 472 ENLDENKLPGLGL 484 + N++ LGL Sbjct: 482 KYFSSNRVRALGL 494 >UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6INY0_RHOCS Length = 620 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 166/421 (39%), Positives = 237/421 (56%), Gaps = 9/421 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+ +L AR + D++ R++L + G + A CPFH EKTPSF VN K F+HCFGC Sbjct: 3 LPPNFLEELRARLSLSDVVMKRMRLIRAGHEYKAPCPFHKEKTPSFYVNDAKGFFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-TLYQLMDGL 123 GAHG+AI F+M +D L F+E VE LA L VP + P + R +RQ +L+ L++ Sbjct: 63 GAHGDAIAFVMRHDNLSFMEAVELLAGEAGLSVP---KASPEAVARFERQKSLFDLVERA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++Q L P A +YL RGL + IARF +G+AP + +I Sbjct: 120 TRHFEQQLGLPAGRQALEYLRGRGLDDDTIARFRLGYAPHDGAGLRAELEQAGYGEADMI 179 Query: 184 DAGMLVTNDQGRSYDR-FRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 +AG+ + GR F RV+FP+ D+RGRV+ FG R+L D PKY+NS +T +FHKG Sbjct: 180 EAGLFKRPEPGRGLRAFFWNRVIFPVTDRRGRVVAFGARLLSGDGPKYINSGDTPLFHKG 239 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR--- 299 LY L A+Q E ++V EGYMDV++ G + AVA LGT+ T I L++ Sbjct: 240 NILYNLSRARQAAVEGRPVVVTEGYMDVISCVTAGFDGAVAPLGTALTEAQILELWKLAP 299 Query: 300 -ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 I C+DGD AGR AA RA+E LP + R FLP+ EDPD+L+R G AF Sbjct: 300 EGRRTPILCFDGDSAGRRAAARAVERLLPLLLPDHSARVAFLPEKEDPDSLIRAGGAAAF 359 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +A +++A PL+ L++ DL+ PD RA L + + +R Q++ ++ Sbjct: 360 QAVLDRARPLADVLWDLEAQGRDLAQPDARAGLEAALAARCAAIQDARVRRAYEQDMRDR 419 Query: 419 L 419 L Sbjct: 420 L 420 >UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF Length = 589 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 185/585 (31%), Positives = 292/585 (49%), Gaps = 21/585 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP IN++ R I++++ V L+K G N+ CPFH EKT SF VN + +HCFGC Sbjct: 4 IPDDKINEVRERASILEIVSDYVSLRKSGANYQGICPFHGEKTGSFNVNPARGIFHCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GNAI F+M + L F E V+ LA + + + + + +R+ LY++ Sbjct: 64 GVGGNAISFIMKIEGLSFPEAVKFLAKRVGVTIEERPRTATEKRQSDERELLYKINGQAA 123 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+Q L P + RQYLE+RG+ + IG+AP WD++ + E + + Sbjct: 124 AFYRQLLLNDPAGEAGRQYLERRGVDSATSEAYGIGYAPDKWDSLTRHL----EQLRVPL 179 Query: 184 DA----GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 D G++ + GR YD FR R++F I D GR IGFGGRVL + PKY+NSPE+ I+ Sbjct: 180 DLAEKLGLIKRREGGRHYDAFRNRLLFVIADMHGRPIGFGGRVLDDSLPKYINSPESPIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK L+GL ++ E ++VEGY D +AL Q GI VA+ GT+ T HI+LL R Sbjct: 240 HKSEVLFGLNLSKYAMREKGNGIIVEGYFDHLALYQAGIRNVVATCGTALTTGHIKLLQR 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 N V +DGD AGR A R++E ++ + + LP G+DPDT ++ +G AF Sbjct: 300 YANKVYTLFDGDSAGRKATLRSMEL---FLDEKLPASVIELPPGDDPDTFLKTQGDGAFA 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A P+ F F+ L+ Q D T +G+ P + ++ R +E+ KL Sbjct: 357 GHLAKAKPIFEFFFSELLGQYDSGTVEGKVGTIEALTPHLMKIVNPIERDLYIKEISRKL 416 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLK------RTTMRILIGLLVQNPELATLVPPLEN 473 G+ D Q+++ + ++ S VP+ + + LI L+ + + V Sbjct: 417 GV-DPRQMQKKIGRSPVSSADLAVPRERVKPRSNKGPEETLISLMGKYAGVIKRVRDYGA 475 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 + L + ++ S+ G+ LLE T + L + M DD D+ A + Sbjct: 476 ANLFSADLLPIAEAIMAHNDSEAGIDWALLLEQIDSTEERSRLAGIFMDDDHLDEIDANK 535 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 F S+L+ + + +E + S+ ER W + ++L Sbjct: 536 AFDQCRMSRDRSMLKDGDVKELKKELSRLDSDSER--YWEILRKL 578 >UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK Length = 600 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 156/405 (38%), Positives = 228/405 (56%), Gaps = 8/405 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + + +DIV++I V+L+KQG+N+ CPFH E +PSF+V+ +KQ +H Sbjct: 1 MGNRIPEEVVEQIRTSSDIVEVIGEYVQLRKQGRNYFGLCPFHGENSPSFSVSSDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP-FEAGSGPSQIERHQRQT--LY 117 CFGCG GN FLM + L F E V++L + + V + +G G Q E T + Sbjct: 61 CFGCGEGGNVFSFLMKMEGLAFTEAVQKLGERNGIAVAEYTSGQGQQQQEDISDDTVIMQ 120 Query: 118 QLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 Q + L +Y L A YL KRG++ E+I +F IG+A WD K Sbjct: 121 QAHELLKKYYHHLLVNTEEGNEALSYLLKRGITKEMIEKFEIGYASQAWDAATKILQKRG 180 Query: 177 ENRQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPE 235 + S+ AG+LV +++ G YDRFR RVMFPI +G+VI F GR LG+DTPKYLNSPE Sbjct: 181 LSLSSMEQAGLLVRSEKDGSHYDRFRGRVMFPIYTLQGKVIAFSGRALGDDTPKYLNSPE 240 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + LY ++A+ + ++++ EGY DV+A + G+ AVA++GT+ T + + Sbjct: 241 TPIFYKSKLLYNFHQARPFIRKRGQVVLFEGYADVLAAVKSGVEEAVATMGTALTEEQAK 300 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 LL R V+ CYDGD+AGR+A +A + L G Q++ LPD DPD V++ G Sbjct: 301 LLRRNVETVVLCYDGDKAGREATMKAGQLLLQV---GCQVKVTSLPDKLDPDEYVQQYGT 357 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLIS 400 AFE ++ ++ F N L +L G+ L +S Sbjct: 358 TAFENLVKSSISFVGFKINYLRLGKNLQDESGKEEYVKSVLKELS 402 >UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K284_DESAC Length = 603 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 161/432 (37%), Positives = 236/432 (54%), Gaps = 9/432 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 RIP I+ + R DIVD++ VKLK G N CPFH+EKTPSF VN +Q +HCF Sbjct: 2 ARIPEDLISQVRERVDIVDVVSGYVKLKHSGDNHLGLCPFHSEKTPSFNVNSSRQIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG GN FLM + L F + V+ LA + +P + S R +R+ L ++ + Sbjct: 62 GCGVGGNVFSFLMRMEGLAFPQAVKRLADQVGVVIPDDEPSPEEVRRRLEREELAEVYEQ 121 Query: 123 LNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY L P AR Y+ +RG E + RF +GF+P WD + + + Sbjct: 122 ATRFYHDILLADPRGAQARGYIRRRGFDSEAVRRFRLGFSPDSWDALCEHLTSEGTDLDK 181 Query: 182 LIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 G++ +D+ G +D FR+R++FPI D G+V+ FGGRVL + PKY+NSPE+ ++H Sbjct: 182 ARQLGLIRRSDKTGNDFDMFRQRLLFPIEDLSGKVVAFGGRVLDDSLPKYINSPESALYH 241 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R LYGLY+A+Q ++VVEGY D +AL Q GI + VA+ GT+ T DH ++L R Sbjct: 242 KSRLLYGLYQAKQAMRRERAVIVVEGYFDHLALVQAGIEHVVATCGTALTDDHAKILKRY 301 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V+ +D D AG+ A +RA+ + L G ++ + LP G+DPD+ VR+EG EAF Sbjct: 302 VERVVLLFDEDAAGQKACFRAMPSLL---QQGLEVMTLSLPAGDDPDSCVRREGAEAFLQ 358 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+ +A + Q + +AR L ++ +VP + R +L + G Sbjct: 359 RLNEARSAIEVHMEVTLEQAG-DRAEAQARAIDTVLQMMQRVPDDIQRNLHLGQLAQRSG 417 Query: 421 I---LDDSQLER 429 + L QLER Sbjct: 418 VTVELLQRQLER 429 >UniRef50_B9R233 DNA primase catalytic core, N-terminal domain family n=3 Tax=Alphaproteobacteria RepID=B9R233_9RHOB Length = 661 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 183/504 (36%), Positives = 270/504 (53%), Gaps = 34/504 (6%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQFYH 60 PR+ ++++ AR + +++ RV ++ GK ++ ACCPFH EK+PSF V+ + Y Sbjct: 17 PRL-LDEIRARLPLSEIVARRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNRYK 75 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ-RQTLYQL 119 CFGCGA G+ F+ + L F E VE LA + +P P R Q R +L + Sbjct: 76 CFGCGASGDHFKFITETEGLSFPEAVERLADQAGVALP---APDPQAARREQKRASLADI 132 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F++ P AR Y++KRGL+ E + F GFAP D + G Sbjct: 133 CEMAAQFFEAQFAGPRGEGARAYVQKRGLTPETLREFRFGFAPDSRDALKSHLKGRGVEE 192 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGR-VLGNDTPKYLNSPETD 237 ++I+AG+L+ D R SYDRFR R+M PI+D RGRV+ FGGR +L + PKYLNSPET Sbjct: 193 PAMIEAGLLIKPDDARPSYDRFRGRLMIPIQDDRGRVVAFGGRTMLPDGQPKYLNSPETP 252 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG L+ + A++ + + LVVEGYMD +AL Q GI + VASLGT+ T D I L Sbjct: 253 LFHKGAMLFNAHRAREPAFKSGQALVVEGYMDAIALYQAGILHVVASLGTAFTEDQILRL 312 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + C+DGD AG AA RA++ P + G +F FLPDG DPD LV++ G E Sbjct: 313 WRFAPEPMVCFDGDAAGISAAHRAIDRIFPVLKSGYSFQFNFLPDGMDPDDLVKQRGVEG 372 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F A E++ L +++ + L TP+ +A L LI + + ++ + +L Sbjct: 373 FWAEAEKSRNLFDVVWDREISVARLDTPERKAALEKRFDDLIGTIRDDRVKRRYQLDLKF 432 Query: 418 KLG--ILDDSQLERLMPKAAESGVSRPVPQLKRTTM---------RILIGLLVQNPELAT 466 KL + S+ +R K + S V L R + R+++GL ++ P+L Sbjct: 433 KLSNLFFELSRNDRKGGKKPGADPSANVIGLARERVAVSDDFGIERLVLGLCMRFPDL-- 490 Query: 467 LVPPLENLDEN--KLPGLGLFREL 488 LD N ++ GL L EL Sbjct: 491 -------LDRNFERVSGLPLVNEL 507 >UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTG4_9FIRM Length = 600 Score = 287 bits (735), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 150/399 (37%), Positives = 233/399 (58%), Gaps = 8/399 (2%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 + DI +LI V LK+ G N+ CPFHNEKTPSF+++ K + CFGCG G+ I F+M Sbjct: 16 KVDIYELISQYVNLKRSGANYIGLCPFHNEKTPSFSLSPSKGIFKCFGCGEGGDVISFVM 75 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPV 135 + L F E ++ LA +N+E+ S + + + Q Y++ F+ +L+ Sbjct: 76 KREGLGFREAIKFLADKYNIELRQAHYSKKDKELKDKAQRFYEINRQAALFFYNNLKN-- 133 Query: 136 ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGR 195 + YL KR +S VI ++ +GFA WDN+ + L++ +L ++ +G+ Sbjct: 134 SKLGMNYLRKREISPAVINKYGLGFANDSWDNLKNHLLSLGYKEEELVEINLL-SSSKGK 192 Query: 196 SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDN 255 +YDRFR R+MFPI D +GRVI FGGRVLG++ PKYLNS E IFHKG L+ L ++ Sbjct: 193 TYDRFRNRIMFPIIDTKGRVIAFGGRVLGDEKPKYLNSSENLIFHKGSNLFNLNLISKE- 251 Query: 256 AEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGR 315 A +++++VEGYMDV++L GINY+VASLGTS T L+ R ++ CYDGD AG Sbjct: 252 ASRDKIILVEGYMDVISLYNSGINYSVASLGTSLTQAQAGLIKRYAKDIYICYDGDSAGI 311 Query: 316 DAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNS 375 +A RA++ L ++G + + L +G DPD ++K GK +FE ++ F ++ Sbjct: 312 NATVRAIDIML---SEGISPKIISLAEGLDPDEYIKKYGKISFEGQVANGKSFLDFKIDN 368 Query: 376 LMPQVDLSTPDGRARLSTLALPLISQVPGETLR-IYLRQ 413 L + +LS+ DG ++ + A ++S + R +Y+R Sbjct: 369 LKEKFNLSSSDGLSKFTMEAGKILSSIKNPIERDVYMRN 407 >UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUC5_DESOH Length = 613 Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 170/431 (39%), Positives = 249/431 (57%), Gaps = 11/431 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++ DIVD++ V+LKK GKN+ CPFH+EKTPSFTV+ +KQ +HCFGC Sbjct: 3 IPDDIIANIKNSADIVDIVSEVVRLKKTGKNYLGLCPFHSEKTPSFTVSPDKQMFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGL 123 G G+ FLM + L F E V LA + +P E GS ++ + +RQ L +M Sbjct: 63 GEGGSVFTFLMKHQGLGFPEAVALLAKRCGIALPRPEKGSREAK-DVSERQRLLSVMQRA 121 Query: 124 NTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY L++ P A +Y+ +RGLS +++ F +G+AP GWD L RF + L Sbjct: 122 AAFYHSCLREGPGGERATRYMAERGLSDDMVRDFQLGYAPGGWD-ALTRFLSKHKIPMPL 180 Query: 183 ID-AGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 + AG++V N +G Y DRFR R++FPI D GRVI GGRV+ + PKYLNSPET ++ Sbjct: 181 AEQAGLVVLNREGSGYYDRFRNRIIFPITDLTGRVIALGGRVMDDTLPKYLNSPETPLYS 240 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K LYGL +Q + + + EGYMD ++L ++GI VA+LGT+ TA+H+++L Sbjct: 241 KSNSLYGLSHTKQMCRQAGTVYITEGYMDFLSLYRHGIKNVVATLGTALTAEHLRMLKGF 300 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + +D D AG AA R++E + G Q + LP G DPDT VR+ G + FEA Sbjct: 301 VTKAVLVFDSDAAGIKAAQRSIE--IFNGEKGIQPFILVLPTGHDPDTYVRENGAQDFEA 358 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRAR-LSTLALPLISQVPGETLRIYLRQELGNKL 419 +A +FL S + + LS +G+ R +S L L + G +Y++ E+ +L Sbjct: 359 LARKAGGAMSFLLESAVNRHGLSL-EGKIRVMSDLEESLAAVEDGVARSLYVK-EVSERL 416 Query: 420 GILDDSQLERL 430 GI + + LE++ Sbjct: 417 GIEESAVLEKV 427 >UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKT6_MOOTA Length = 605 Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 163/397 (41%), Positives = 232/397 (58%), Gaps = 10/397 (2%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I+++ R DIV++I V+LKK+G+++ CPFHNEKTPSFTV+ +KQ ++CFGCGA G+ Sbjct: 10 IHEVKDRIDIVEIIGGYVQLKKRGRSYVGLCPFHNEKTPSFTVSPDKQVFYCFGCGAGGD 69 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 + FLM + L F E + LAA +E+ E + ++ +R ++ LY+L +FY + Sbjct: 70 VLTFLMKREGLSFPEALAALAARAGVELVGEEETPAARRQRELKERLYRLGAIAASFYYR 129 Query: 130 SL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWD---NVLKRFGGNPENRQSLIDA 185 L + P AR YL++RG+ +F +GFAP N L+R G PE + A Sbjct: 130 ILARHPAGAPARSYLQRRGIKGVTARQFELGFAPDAGAVLVNYLQRQGFTPEE---IEQA 186 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+ ++ DRFR R+MFPI+D R RVIGFGGRVLG PKYLNSPET +FHKG L Sbjct: 187 GLSLSRPPRGLVDRFRGRLMFPIKDSRSRVIGFGGRVLGEGQPKYLNSPETILFHKGHHL 246 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 +GL+ + + R ++VEGYMD++A Q+GI+ VASLGTS T + L + VI Sbjct: 247 FGLHLSLPGIRKEGRAILVEGYMDMIAAWQHGIDNVVASLGTSLTPAQARELKKYAREVI 306 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG+ A R L+ G Q+R + LP+G+DPD + G EAF + + Sbjct: 307 IAYDADTAGQAATLRGLDI---LAAAGLQVRVLQLPEGKDPDEFLAARGPEAFRELVAGS 363 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 L F + + + D T GR + T LP + QV Sbjct: 364 QGLMEFRIHKAVSEHDAGTAAGRKAIMTALLPYLRQV 400 >UniRef50_Q2GAN5 DNA primase n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=Q2GAN5_NOVAD Length = 572 Score = 287 bits (734), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 162/415 (39%), Positives = 244/415 (58%), Gaps = 20/415 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP F+++L +RT + LI +K+ K G+ F ACCPFH EKTPSFT+N K FYHCFGC Sbjct: 3 IPHQFLDELRSRTTLSALIAQTLKIDKAGREFKACCPFHGEKTPSFTINDAKGFYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGL 123 GAHG+AI ++++ L+F++ V ELA+ ++VP P + ER + +T+ + +D Sbjct: 63 GAHGDAIRWMIDQRGLQFIDAVSELASAAGMKVP---APTPQERERSAKIETVREALDIA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L++ A + QYLE+RG++ + F IG+A G D L+ G+ RQ Sbjct: 120 QGIFVGQLRE--AGAVMQYLERRGMTPMDLEIFGIGYA-RGMDGSLR---GSGIGRQIGQ 173 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPETDIFH 240 AG+L + G + F +RV PI D RGR++GFGGRV DTPK++NSP++ IF Sbjct: 174 AAGLLSQREDGSLREMFHDRVTVPIHDARGRLVGFGGRVWPGRRRDTPKFVNSPDSPIFD 233 Query: 241 KGRQLYGLY--EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 KGR L+ L+ NRL+VVEGY DVV++A+ G VA +GT+ T + + + Sbjct: 234 KGRTLFNLHRAAPAARPGAENRLIVVEGYFDVVSMARAGFAACVAPMGTALTEEQLVRCW 293 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE----G 354 R + + +DGD AG+ AA RA TA+P + GR+L LPDG+DPD L+ + G Sbjct: 294 RLHHRPVLLFDGDSAGQKAAVRACRTAIPGIGPGRELAIALLPDGKDPDELLYMDATGMG 353 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLR 408 + A EA + +A+PL FLF++++ + + TP+ A + L ++ E R Sbjct: 354 RRAIEAIVTEALPLHTFLFDAIVAEAGANPTPEQTAAVWAELAALAGEIADEETR 408 >UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY76_HYPNA Length = 627 Score = 287 bits (734), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 159/421 (37%), Positives = 235/421 (55%), Gaps = 8/421 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP F+++L AR D+I +VKL K+GK + PF EKTPSF VN +K+ + CF Sbjct: 7 RIPDGFVDELKARIRPSDVIGRKVKLTKKGKEWVGLSPFTAEKTPSFYVNDQKRIFKCFS 66 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQLMDG 122 G G+ I+F+M ++L F+E VE+LA + +P + P+ E + R+ L + Sbjct: 67 SGMGGDVINFVMETERLSFMEAVEKLAEEAGMALP---KASPAAAEEYDHRKRLQAACEA 123 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F++ L+ AR YLE RGL+ +++ +G+AP W L Sbjct: 124 AADFFEARLRSSEGAGARTYLEGRGLAASSWSKYRLGYAPDDWRRTRAHLQAEGFTDGEL 183 Query: 183 IDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFH 240 ++AG++ ND+G YD FR R+MFPI D RG +I FGGR L D PKYLNS +T +FH Sbjct: 184 LEAGIIKENDKGGEPYDAFRGRLMFPIPDSRGGIIAFGGRALQPDAKPKYLNSGDTPLFH 243 Query: 241 KGRQLYGLYEAQQ--DNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 K LY A++ + E L+V EGYMDV+A+ + G AVA LGT+ T + +QLL+ Sbjct: 244 KSTVLYRYKAAREALGHGEGGGLIVCEGYMDVIAMCEAGFGNAVAPLGTALTEEQLQLLW 303 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 RA + C+DGD+AG AA+RAL+ ALP+ GR + F+ LPDG DPD L+R G A Sbjct: 304 RAGPEPVMCFDGDKAGLGAAYRALDRALPFAEPGRSVFFVLLPDGMDPDDLIRARGAGAM 363 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ +PLS L+ L TP+ +A L + + ++ ++L ++ Sbjct: 364 SEQLAARLPLSELLWRRERDAEPLDTPERQAGLEARLIAACGHIRHPGVKSAYERDLKSR 423 Query: 419 L 419 L Sbjct: 424 L 424 >UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM Length = 594 Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 176/494 (35%), Positives = 260/494 (52%), Gaps = 29/494 (5%) Query: 6 PRV--FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 PR+ F+ + ARTDI+ ++ V LK++G + CCPFH+EKT SF+V + F++CFG Sbjct: 4 PRMEAFVQQVRARTDILAVVQGYVSLKRKGSRYWGCCPFHSEKTASFSVVPAEGFFYCFG 63 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C A G+A FL + + E + A +E P + L ++ Sbjct: 64 CHAGGDAFKFLSLIEHITPFEAILRQAEQLGIERPARQRDAREEARLRALDDLRRVNALA 123 Query: 124 NTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ L + + YL RG++ E I R+ IGFAP W + F + L Sbjct: 124 RDFFHNCLTMTRYGAAGKAYLAGRGITDEAIERYGIGFAPDAWSKLSDAFQKRGVAQHVL 183 Query: 183 IDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +DAG+ V ++G YDRFR RV+ PI D+RGR++GFGGR LG+ PKYLN+ ET +F+K Sbjct: 184 VDAGLAVRRERGGGIYDRFRGRVIIPIADERGRIVGFGGRALGDAQPKYLNTAETPVFNK 243 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 + L+G+ A A +VVEGYMD +A + G+ VA+LGTS T+DH LL R Sbjct: 244 RKLLFGMDRAHSAIARAGYTIVVEGYMDAIAAWEAGVENVVATLGTSFTSDHAALLLRRA 303 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGR--QLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ CYD DRAG++A RAL GR ++R + LPDG+DPD VR G EAF Sbjct: 304 PRIVFCYDSDRAGQEATLRALAA-----VRGRAAEVRVLLLPDGKDPDEYVRTHGAEAFR 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A +E A+P AF + Q+ RA L + LP+++++ Y+R+ Sbjct: 359 ALVETAVPAPAFRLRHIRAQMADGIEGQRAALRAM-LPVLAELDDVERAAYVRRTAAEFF 417 Query: 420 ---GILDDSQLERLMPKA--AESGVSRP-----VPQLKRTTMRI---LIGLLVQNPE-LA 465 G++ D+ L R + + AESG + P V Q R R LI + +P+ LA Sbjct: 418 LDEGVVADA-LRRFLRRGGTAESGTAEPTRIAAVRQPDRALQRAGRQLIAAVWHDPDFLA 476 Query: 466 TLVP--PLENLDEN 477 ++ PLE ++ Sbjct: 477 SITDAVPLEAFPDD 490 >UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW37_9RHOB Length = 648 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 172/481 (35%), Positives = 258/481 (53%), Gaps = 26/481 (5%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQFYH 60 PR+ ++++ AR + D++ RV ++ GK ++ ACCPFH EK+PSF V+ + Y Sbjct: 5 PRL-LDEIRARLTLSDVVGRRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNRYK 63 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT-LYQL 119 CFGCGA G+ FL + L F E VE LA + +P P R +++ L + Sbjct: 64 CFGCGASGDHFTFLCETEGLSFPEAVERLAEQAGVGLP---APDPQAARREKKRAGLADI 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q P +AR Y +KRGL+ E + F GFAP D + Sbjct: 121 CEMAAQFFQAEFAGPRGDAARAYTQKRGLAQETLREFRFGFAPDSRDALKGYLAAREIPE 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETD 237 ++I+AG+++ + GR SYDRFR R+M PI D RGRV+ FGGR L D PKYLNSPET Sbjct: 181 AAMIEAGLIIKPEDGRPSYDRFRGRLMIPIHDDRGRVVAFGGRTLSPDGQPKYLNSPETP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG L+ + A++ + +VVEGY+D +AL Q GI++ VASLGT+ T D + L Sbjct: 241 LFHKGVMLFNAHRAREPAFKSGEAVVVEGYLDAIALWQAGIHHVVASLGTAFTEDQVVRL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 ++ + C+DGD AG AA RA++ P + G +F FLPDG DPD L+++ G Sbjct: 301 WKFAPEPVICFDGDAAGVSAAHRAIDRIFPVLKSGYSFQFCFLPDGMDPDDLIKQRGVTG 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F +E+A L +++ + L TP+ +A L LI + E +R + +L Sbjct: 361 FHDEVERAQSLFEVVWDREISVSRLDTPERKAALEKRFDDLIGTIRDERVRRRYQLDLKF 420 Query: 418 KLGILDDSQLER--------LMPKAAESGVSRPVPQLKRT------TMRILIGLLVQNPE 463 KL L Q + AAE+GV + + + + T R+++GL ++ P Sbjct: 421 KLSNLFFEQARQSRQGGKGGRSGGAAEAGVPLGMARERVSATHDFGTERLVLGLSMRFPY 480 Query: 464 L 464 L Sbjct: 481 L 481 >UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaerobacterales RepID=Q8R969_THETN Length = 600 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 154/405 (38%), Positives = 226/405 (55%), Gaps = 12/405 (2%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I ++ DIVD+I V+LK+ GK F CPFH EKTPSF V+ KQ YHCFGC A GN Sbjct: 8 IEKVIEANDIVDVISDYVELKRAGKEFRGLCPFHREKTPSFMVSPTKQVYHCFGCNASGN 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR--QTLYQLMDGLNTFY 127 + F+M+ + L F E +E LA +P E + + ++ + +Y++ F+ Sbjct: 68 VVTFIMDIENLSFKEAIEFLAERAG--IPLEEVDLSEEEAKRKKIIEEIYRVNKIAALFF 125 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 + L A +YL+ RGLS I +F IG+AP D++L G L AG+ Sbjct: 126 HRKLFSEEGVKALEYLKSRGLSSTTIKKFGIGYAPSN-DDLLNFLKGKGYKENFLSKAGL 184 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 +V G+ YDRF++RVMFPI D RG V+GFGGR L + PKYLN+PET+IF KG+ L+ Sbjct: 185 VVYK-SGKYYDRFKDRVMFPIIDVRGNVVGFGGRALDDSLPKYLNTPETEIFKKGKTLFA 243 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R NV+ Sbjct: 244 INFAKK--TQDDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRYKKNVVIA 301 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG +A R L+ + ++ + +P+G+DPD ++KEG EAF +E A Sbjct: 302 YDADEAGVNATLRGLDILEKLNIN---IKVLSIPEGKDPDEFIKKEGSEAFRRLVENAES 358 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR-IYL 411 L F D + R I+++ E R +Y+ Sbjct: 359 LIEFKSKIFKKGFDFEKVEDRIIYVKKIASEIAKISDEVKREVYI 403 >UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG56_HELMI Length = 656 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 165/420 (39%), Positives = 243/420 (57%), Gaps = 14/420 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P++ ++++ R DIV+++ V LK+QG + CPFH+EKTPSFTV+ +KQ++HCFG Sbjct: 2 RDPQI-VDEIRHRLDIVEIVADYVALKRQGGRYVGLCPFHSEKTPSFTVSRDKQYFHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+ F+M + L F E +++LA + +P + Q +R + L Sbjct: 61 CGTGGDVFTFVMLRENLTFPEALKKLAERAGVTLPERKLTPTQQAQRTAVERGRALHKRA 120 Query: 124 NTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y + L++ A R+YL +RG+S V F +GFAPPGW+ + R + L Sbjct: 121 AELYFRCLREDARARPGREYLSRRGVSDSVAVDFGLGFAPPGWEFLATRLQQEGYLPEEL 180 Query: 183 IDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 G++V G Y DRFR R++FPI D +GR + FGGRVL + PKYLNSPET ++ K Sbjct: 181 ERFGLIVPRQGGEGYYDRFRNRIIFPIFDAQGRPVAFGGRVLDDAVPKYLNSPETPLYKK 240 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G+ LYGL +A E ++VEGYMDV+A Q+GI AVASLGT+ T + +LL R Sbjct: 241 GQHLYGLNKAGSAIREKGVAVLVEGYMDVIACHQHGIRQAVASLGTAMTPEQGRLLLRYG 300 Query: 302 NNVICCYDGDRAGRDAAWRA--LETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ CYD DRAG +AA +A + TAL G Q++ + LP+G+DPD +++ G ++F Sbjct: 301 PRVLICYDSDRAGVEAAVKAGGILTAL-----GAQIQVLTLPEGKDPDEYLQRHGADSFW 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRA----RLSTLALPLISQVPGETLRIYLRQEL 415 EQA F ++ DLS+ G+A L++L L + S V E +L +EL Sbjct: 356 LAAEQAPSFFTFCYSRAAAAQDLSSAVGKASVVRELASLLLTMPSAVEQEANIQWLAREL 415 >UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_SYNJB Length = 646 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 156/368 (42%), Positives = 225/368 (61%), Gaps = 12/368 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G +P FI + + D+V+++ +V L+KQGKNF CPFHN+ PSF V+ KQ Y Sbjct: 1 MSG-LPPDFIQLVRQKADLVEVVAEKVVLRKQGKNFVGLCPFHNDHKPSFQVSPSKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF---EAGSGPSQIERH--QRQT 115 CF CGA G+ + F+M + L F E V LA +++ +P EA S ER R+ Sbjct: 60 CFSCGAGGDVLRFVMQTEHLSFAEAVRHLARRYHIPLPTRNPEAQPLGSLDERELSHREK 119 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L +++ FY+ +L+ + ++ARQYL R LS E + +F IGFAPPGW ++ + + Sbjct: 120 LLEILAMAADFYRHALRSQLGSAARQYLHSRHLSEETLQKFQIGFAPPGWQSLYEYLVNH 179 Query: 176 PENRQSLI-DAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLN 232 L+ +AG+LV QG YDRFR R+M PI D +GRVIGF GR LG PKYLN Sbjct: 180 KRQPVKLLEEAGLLVPRQQGSGHYDRFRNRIMLPIFDVQGRVIGFAGRALGESGQPKYLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET++F+K + +YGL A+ A+ +++LVVEGY DV+AL Q G+ YAVA++GT+ T Sbjct: 240 SPETELFNKSQVVYGLNFARDAIAKADQVLVVEGYFDVIALHQAGVAYAVAAMGTALTPH 299 Query: 293 HIQLLFRATNN--VICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTL 349 ++ L R T + +I +D DRAG +AA RA+E G +LR + LP+G+D D Sbjct: 300 QVKTLLRYTQSKRLILNFDADRAGLNAASRAIEAIEEQARRGEIELRILTLPEGKDADEF 359 Query: 350 VRKEGKEA 357 +R+ A Sbjct: 360 LREYKSSA 367 >UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNW9_9FIRM Length = 592 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 162/480 (33%), Positives = 259/480 (53%), Gaps = 24/480 (5%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 F+ + +TDI+ ++ V LK++G + CCPFH EKT SF+V +K F++CFGC A Sbjct: 8 AFVERVSEQTDILRIVQGYVPLKRRGNRYWGCCPFHQEKTASFSVLPDKGFFYCFGCHAG 67 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGLNTF 126 GNA FL + + + + ++ A + +P E P ++ R + Q L ++ + F Sbjct: 68 GNAFKFLSLIENISYFDAIKLQAEKLGIPLP-ERKRSPQEVARDREIQDLRKVNELARDF 126 Query: 127 YQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L + + Y RG+ E I F +G+APP WD + F ++ L+ + Sbjct: 127 FHNCLTMTRMGERGKAYFAARGIRQETIEEFQLGYAPPAWDKLSTAFLKRGIKQEFLLAS 186 Query: 186 GMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+ QG YDRFR RV+ PI D+RGRV+GFGGRVL + TPKYLN+PET +F+K + Sbjct: 187 GLCAERKQGGGLYDRFRGRVIIPIADERGRVVGFGGRVLDDSTPKYLNTPETVLFNKRKL 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+GL + + + R +VVEGYMD +++ G++ VASLGT+ T +H + L + Sbjct: 247 LFGLDRSHRAIQQEGRAIVVEGYMDAISVFDAGVHNVVASLGTAFTPEHAKKLLHYAPEI 306 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 CYD D AG+ A RAL G ++R + +PDG+DPD +RK G +AF A +E+ Sbjct: 307 CFCYDSDEAGQKATIRALSIV---RDTGARVRVIVVPDGKDPDEFIRKHGADAFRALVEK 363 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+PL + ++ + T DG+ + +P+++ + +R + L L +LD+ Sbjct: 364 ALPLVEYRLRYVLSHTNYDTLDGKVKALHEMMPVLAGIREAAVRSEYERRLAQTL-MLDE 422 Query: 425 ----SQLERLMPKAAESGVSRPVPQLK-------RTTMRILIGLLVQN----PELATLVP 469 S+L P+ AE V +P+ + R R++I + Q+ L T+VP Sbjct: 423 GIVRSELRHYRPE-AEEAVRQPIRKAVAKADTALRKAGRLVIRMAWQDAAVIAHLETIVP 481 >UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_THEEB Length = 694 Score = 285 bits (729), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 170/434 (39%), Positives = 250/434 (57%), Gaps = 19/434 (4%) Query: 5 IPRVF---INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 IPR+ I + +IVD++ V L+K+G+ + CCPFH EKTPSFTV+ K FY+C Sbjct: 3 IPRLHPDTIEAVRQAVNIVDVVAEHVVLRKRGREYVGCCPFHEEKTPSFTVSPLKGFYYC 62 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQL 119 FGCGA GNAI FLM K F E V +LA H + V ++ ++ LY++ Sbjct: 63 FGCGAGGNAIKFLMELQKRSFAEVVLDLAQRHQIPVRTLDSEQKQALQARLSLQEQLYEI 122 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + +FY+ +L+QP+ +A+ YL++ R L E I +F +G+AP GW + Sbjct: 123 LAIATSFYEHALRQPIGQAAQDYLQRQRHLKEETIQQFRLGYAPAGWQVLYTYLVEQKGY 182 Query: 179 RQSLID-AGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 +L++ AG+++ G R YDRFR+R++ PI D +GRV+GFGGR L N+ PKYLNSPET Sbjct: 183 PAALVEQAGLIMPQRTGDRYYDRFRDRLIIPIMDTQGRVVGFGGRTLSNEEPKYLNSPET 242 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+KG+ L+GL +A+Q A+ ++ +VVEGY DV+AL Q G VASLGT+ + I+L Sbjct: 243 PIFNKGQLLFGLDKARQAIAQTDQAIVVEGYFDVMALHQAGFPQTVASLGTALSQAQIKL 302 Query: 297 LFRATNN--VICCYDGDRAGRDAAWRALETA--LPYMTDGRQLRFMFLPDGEDP------ 346 L R T + +I +D D+AG+ AA RA+ A L Y D R LR + LP G+D Sbjct: 303 LLRYTESKQIILNFDADKAGQRAADRAIGEAADLVYRGDLR-LRILTLPAGKDAADFFTV 361 Query: 347 DTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 D + A++ ++QA + +L+ Q DL D + S L++++P T Sbjct: 362 DEATLAARRAAYQTLLDQAPLWLDWQIQTLVQQYDLEQGDQFQQASQALSELLAKLPNAT 421 Query: 407 LRIYLRQELGNKLG 420 LR + LG Sbjct: 422 LRSHYIHHCAELLG 435 >UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO Length = 626 Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 157/389 (40%), Positives = 229/389 (58%), Gaps = 13/389 (3%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 RIP I+ + + DIVD+I V+LKKQG+N+ CPFH EKTPSF+V+ EKQ +HCF Sbjct: 2 ARIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGEKTPSFSVSPEKQIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE--AGSGPSQIERHQRQT----- 115 GCG GN FLM +D L FVE+V+++A M +L+V E S + + +T Sbjct: 62 GCGKGGNVFSFLMEHDGLTFVESVKKVADMSHLDVAIELPEERDTSNLPKETSETAKMVE 121 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 ++QL L ++ ++ T+A YL++RG+S +++ F IGFAP + Sbjct: 122 MHQLTAKL--YHYILMETEEGTAALTYLKERGMSEQMMTTFQIGFAPNHHATITSFLEKR 179 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSP 234 + Q AG+L D G+ DRFR R+MFPI + RG++I F GR+ +D PKYLNSP Sbjct: 180 GMDLQLAGAAGLLSERDDGQMVDRFRNRIMFPITNDRGQIIAFSGRLFDRDDGPKYLNSP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +F+K R L+ EA+Q + + ++EG+MDV++ + G+ AVAS+GTS T +H Sbjct: 240 ETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVISAEEAGVQNAVASMGTSLTEEHA 299 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 L+ R TN I CYDGDRAG +AA++A L + + + LP G+DPD +R G Sbjct: 300 DLIKRLTNRAIICYDGDRAGIEAAYKA--GTLLVERNRLDVFVLQLPAGKDPDDFIRASG 357 Query: 355 KEAF-EARMEQAMPLSAFLFNSLMPQVDL 382 E F E +Q M +AF + L + +L Sbjct: 358 PEKFKEVYKQQRMTWTAFKIHYLRKERNL 386 >UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVF2_SYNAS Length = 594 Score = 283 bits (725), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 149/369 (40%), Positives = 216/369 (58%), Gaps = 6/369 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 + G P I ++ +R DIV+LI + LKK GKNF CPFHNEKTPSFTVN EKQ Y+ Sbjct: 2 LKGDHPGDKIAEIKSRIDIVELISEYISLKKAGKNFLGLCPFHNEKTPSFTVNREKQMYY 61 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ FLM F +T++ LA + +P + G + + + R+ + Q+ Sbjct: 62 CFGCGEKGDVFAFLMRLHNTTFPDTLKLLARRTGVILPTSSFRGDGKSQLNAREQIIQIN 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y+ +L P +A YL++RGL I F++G+A GW + ++ + Sbjct: 122 QIAAAYYKDNLFSPGGKAASSYLKERGLKESTIEVFSLGYALDGWRYLRNHLERKKQSLK 181 Query: 181 SLIDAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +AG++V D YDRFR R+MFP++D GR+I FGGR+LG+ PKYLNSPE+ Sbjct: 182 MAGEAGLIVAKDDRPDVLYDRFRNRLMFPVKDVDGRIIAFGGRILGDGEPKYLNSPESPA 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + KGRQLYGL A+++ +++VEGY D++ L GI VA+LGT+ T DH+ L+ Sbjct: 242 YIKGRQLYGLNLAKEEIRRCGYVILVEGYFDLIVLWNAGIKNVVATLGTALTKDHVALIR 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ V +D D AG+ A R++E + D R + LP+G DPD VR+ G EA Sbjct: 302 RYTDQVAITFDSDEAGKKALARSVEMFIAAHMDARAV---VLPEGLDPDDFVRRYGGEAL 358 Query: 359 EARMEQAMP 367 + RM + P Sbjct: 359 K-RMVEGAP 366 >UniRef50_C7RD99 DNA primase n=3 Tax=Anaerococcus RepID=C7RD99_ANAPD Length = 544 Score = 283 bits (725), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 151/434 (34%), Positives = 246/434 (56%), Gaps = 24/434 (5%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN +L ++IVD+I V LK+ G +F CPFHNEKTPSFTV+ +KQ +HCFGCGA G+ Sbjct: 9 INQILESSNIVDIIGEYVDLKRAGSSFKGLCPFHNEKTPSFTVDEKKQLFHCFGCGAGGD 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 + F+M + L + E+++ LA + + + G ++ + + LY + + F+ + Sbjct: 69 VVSFIMQKEGLSYPESLKYLADKAGISIDYTENPGVNK----KNKELYDINKDIMMFFYK 124 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 +L A+ YL+ RGLS +++ F +G+A WD++ + + L D G++ Sbjct: 125 NL--LTDRKAQAYLKSRGLSSKIVNTFMLGYARDSWDDLYSYIRKKNYSEKDLDDLGLIK 182 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL- 248 + +G YD++R+R++FPI + G+VIGFGGR + PKYLNSPE+ IF K LYGL Sbjct: 183 KSSKGNYYDKYRDRIIFPIINHFGKVIGFGGRAVSGQMPKYLNSPESSIFKKRYNLYGLN 242 Query: 249 -YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 Y+ Q+ L++VEGYMDV+AL +G++ AVASLGT+ T D +L+ R ++++ C Sbjct: 243 IYKRQK----RKELILVEGYMDVIALNNHGLDIAVASLGTALTIDQAKLMKRYSDDIYIC 298 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG A +A+E + G + L DG DPD ++ +GK+AFE ++ A Sbjct: 299 YDQDNAGVKATEKAIEI---FHEIGINPSVIVLDDGNDPDDFIKAKGKDAFEEKIADAQD 355 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 + +N ++ + + P R L + ++ + +QEL ++ I + S+L Sbjct: 356 SYNYKYNKILDEYSSAKPAERFDKLNLFVDFLASI---------KQELTQEIFINNVSKL 406 Query: 428 ERLMPKAAESGVSR 441 + + VSR Sbjct: 407 FDIDKTTLKQAVSR 420 >UniRef50_A4JV82 DNA primase n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JV82_BURVG Length = 569 Score = 283 bits (723), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 174/425 (40%), Positives = 243/425 (57%), Gaps = 29/425 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++++ RTD+V+++ VKLKK GK+F CPFH EK+PSFTV+ KQFYHCFG Sbjct: 6 RFADAFLDEVRERTDLVEVVGQHVKLKKGGKDFVGLCPFHTEKSPSFTVSPVKQFYHCFG 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHGN FL Y +FV V+ELA L +P + + R ++ D L Sbjct: 66 CGAHGNVFSFLTEYSGYDFVSAVQELALRAGLSMPERSAPTAHALAAEARTA--RIGDAL 123 Query: 124 N----TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPG----WDNVLKRFGGN 175 T+++ P A Y++ RGL+ + +F +G+A G WD V Sbjct: 124 QRAQRTYFRNLRNCPGAIG---YMKGRGLTKATVVQFGLGYADDGHIHDWDGVAI----- 175 Query: 176 PENRQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 L AG++ +D+ G ++RFR R+MFPI ++R +IGFGGRVL + PKYLNSP Sbjct: 176 ----DVLECAGLVAVDDETGVYHERFRRRLMFPIWNERSELIGFGGRVLDDRQPKYLNSP 231 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET++F KG +LYGL A+Q + +VVEGYMDVV L Q+G AVASLGTS T + + Sbjct: 232 ETEVFRKGEELYGLNFAKQSIRQGRLAVVVEGYMDVVMLHQHGDARAVASLGTSLTEEQL 291 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 + L+R ++V+ C+DGD+AGR AA RA A+ DG+ F+ LP DPD+ VR+ G Sbjct: 292 RRLYRMADHVVFCFDGDKAGRAAADRAARVAIGITPDGKTASFLTLPGDHDPDSFVREHG 351 Query: 355 KEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGR---ARLSTLALPLISQVPGETLRIY 410 +++ A +E +A PLS L L+ DL + R AR L +I P R Sbjct: 352 IDSWRAFVECEATPLSRKLIEMLLRGRDLEIAEHRAAFARDGIETLAVIGHAP--IFRAA 409 Query: 411 LRQEL 415 L+ EL Sbjct: 410 LQSEL 414 >UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG04_LIBAP Length = 648 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 156/432 (36%), Positives = 241/432 (55%), Gaps = 21/432 (4%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQFYH 60 PR FI DLL I +LI V ++ N + ACCPFH+EKTPSF N K FY+ Sbjct: 4 PRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYY 63 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT-LYQL 119 CF C G+ + FL F+E+V+ LAA+ + +P P ++ + QT L +L Sbjct: 64 CFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPV---VDPKIEKKEKIQTDLIRL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ F+ SL+ YL++RG+ I F +G+AP ++ + + Sbjct: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETD 237 + +I+AG+L+ D SYDRFR R++FPIR RG+VI FGGR L ++ KYLNSPET Sbjct: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240 Query: 238 IFHKGRQLYGLYEA----QQDNAEPNR------LLVVEGYMDVVALAQYGINYAVASLGT 287 +FHKG+ LY + A Q+ + R +++VEGYMDV++L Q G+ V+SLGT Sbjct: 241 LFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGT 300 Query: 288 STTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPD 347 + T ++LL++ + ++ C+DGD G AA++A++ L ++ G ++ F+ L GEDPD Sbjct: 301 ALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPD 360 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 + +R GK AFE + +++PL L+ +TPD RA L I+ + + L Sbjct: 361 SFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKL 420 Query: 408 RIYLRQELGNKL 419 R Y Q + ++L Sbjct: 421 RYYYSQAIRDRL 432 >UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_BACSK Length = 603 Score = 280 bits (716), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 181/568 (31%), Positives = 294/568 (51%), Gaps = 48/568 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +IP + ++ +DIV++I V+LKKQG+ + CPFH+EKTPSF+V+ +KQ YH Sbjct: 1 MAVKIPDEKLTEVREASDIVEVIGEYVQLKKQGRQYGGLCPFHDEKTPSFSVSEDKQVYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GN FL F ETV LA + +P ++ ++ + + Q+ Sbjct: 61 CFGCGAGGNVFTFLQELKGWSFSETVSHLAERAKIALP---QMQKTETDKPEDARIRQMK 117 Query: 121 DG----LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 G +T++ R Y ++R + + I F IG+A W+ + F N Sbjct: 118 KGHELAASTYHSILTLTEEGAPGRVYAQERLFTQDQIEHFRIGYALNDWETLAVIFETNG 177 Query: 177 ENRQSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPE 235 + + ++G+L QG Y D FRER+MFPI D +G V+ FGGR +G PKYLNSPE Sbjct: 178 LDLAVMAESGLLAKRKQGTGYYDLFRERLMFPITDSQGSVVAFGGRAIGEGQPKYLNSPE 237 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IFHK + L+ ++EA+ + N+ L+VEG DV+A + G+ VA+LGT+ ++DH + Sbjct: 238 TPIFHKAKTLFHMHEARPSIRKQNKALLVEGAFDVMAAWKAGVTNVVATLGTALSSDHAK 297 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEG 354 LL R VI CYDGDRAGR+ A+ A+P + + G ++ LP+G DPD V++ G Sbjct: 298 LLRRNAEEVILCYDGDRAGRE----AIRKAIPVLEEAGCKVSICLLPEGLDPDDYVKQHG 353 Query: 355 KEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 +EAF ++ + + + AF L ++ R + + +++++ + Y Q Sbjct: 354 EEAFVRILDNECLSVMAFRMLDLKQGKNMQNEGDRLQYIEEIVQMLAKLEHSVEQEYYLQ 413 Query: 414 ELGNKLGILDD------SQLERLMPKAAES----------------GVSRPVPQLKRTTM 451 +L + D S+ ERL+ + E+ G +RPVP + Sbjct: 414 QLAESFTLPMDVLRQELSRAERLLKQTKETPKALPRAEKPTSGRKQGSARPVPAHVKAE- 472 Query: 452 RILIGLLVQNPELATLVPPLE----NLDENKLPGLGLFRELVNTCLSQPGLTTGQL---L 504 RIL+ ++Q+ E+ V NL+E++ L+ L++ +P + + L Sbjct: 473 RILLAYMLQDTEMVWRVSEKLGTGFNLEEHQ----ALYAYLLSFVTREPDASMKRFVESL 528 Query: 505 EHYRGTNNAATLEKLSMWDDIADKNIAE 532 E R AA L + ++ +D+ +A+ Sbjct: 529 EDRRLAKLAAYLLMQPLKNECSDEELAD 556 >UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFS4_9CLOT Length = 605 Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 156/449 (34%), Positives = 252/449 (56%), Gaps = 10/449 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKN+ CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGVISEYVKLEKKGKNYFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ-RQTLYQL 119 CFGCG GN + F+M+ + L+F E + LA +++P + G E+ ++ L ++ Sbjct: 61 CFGCGKGGNVLHFIMSIENLDFPEALRFLADRAKIQIP-DITEGVRNDEKAGLKKELLEI 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F++ +L YL R + + IA+F IG+A +D + K + Sbjct: 120 NLEAARFFRDNLNNEKNNIPNSYLMNRKIQKQTIAKFGIGYAEDRYDILYKHLKAKGFSD 179 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 S+ +G+++ ++ G+ YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET++ Sbjct: 180 SSIKQSGLVIYKEESGKIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEV 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + KG+ LY L A+ +A +L++ EGYMDV++L Q GI +VA LGT+ T + +LL Sbjct: 240 YQKGKHLYALNFAK--SACSKQLILSEGYMDVISLHQCGIINSVAPLGTALTENQGRLLK 297 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T ++ +D D AG+ AA+R+L+ G +R + +P G+DPD ++ G F Sbjct: 298 KYTEEIVLSFDSDSAGQAAAFRSLDLLNEI---GCNVRVLTIPSGKDPDEFIKAHGVTEF 354 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L ++ Sbjct: 355 KQLVDRSKGLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSDE 414 Query: 419 LGILDDSQLERLMP--KAAESGVSRPVPQ 445 LG+ S L + K A+S + VP+ Sbjct: 415 LGVSTQSILSEIAKQQKEADSNFKQQVPR 443 >UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 Length = 587 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 152/381 (39%), Positives = 227/381 (59%), Gaps = 9/381 (2%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I+++++R DIVD+I VKLKK G ++ CPFHNEK+PSF+V+G++Q YHCFGCGA Sbjct: 4 REVIDEVISRNDIVDVISGYVKLKKNGSSYTGLCPFHNEKSPSFSVSGQRQLYHCFGCGA 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 GN I F+M Y+ + F+E V+ L + +P + S + ER R L ++ T+ Sbjct: 64 GGNVITFVMEYENMTFLEAVKMLGERAGVALPQTSMSEEDRKERGIRDRLLEINKIAATY 123 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y + L+ + YL+KR LS I F +G+A N+ K + L ++G Sbjct: 124 YYRQLRSENGKAGLDYLKKRELSDSTINSFGLGYATQSTGNLYKLLKDKGYDDDILKESG 183 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 L T ++G +++F RV+FPI D +VIGFGGRV+G+ PKYLNSPET +F K R LY Sbjct: 184 -LFTYERG-IHEKFWNRVIFPIMDINNKVIGFGGRVMGDAKPKYLNSPETRLFDKSRNLY 241 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 GL A+ + +PN +++ EGYMDV+++ Q G N AVASLGT+ T H +LL R T+NV+ Sbjct: 242 GLNIART-SRKPN-MIICEGYMDVISMHQAGFNQAVASLGTALTPGHARLLKRYTDNVLI 299 Query: 307 CYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA R A+P + + G + + + +DPD ++ G EAF+ R++ A Sbjct: 300 TYDSDEAGVKAALR----AIPILKEAGLSTKVINMRPYKDPDEFIKAMGAEAFQERIDNA 355 Query: 366 MPLSAFLFNSLMPQVDLSTPD 386 + +++ D P+ Sbjct: 356 ENSFMYEIGTMLRNYDRGDPE 376 >UniRef50_A5FWU8 DNA primase n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FWU8_ACICJ Length = 609 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 193/494 (39%), Positives = 266/494 (53%), Gaps = 39/494 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+++L RT + L+ RV+L++ G++ CCPFHNEK+PSF V + YHCFGC Sbjct: 3 LPPHFLDELRHRTPLAPLVARRVRLERAGRDQKGCCPFHNEKSPSFYVYDDH--YHCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI F+M + F+E VE LAA LEVP PS + +L D L Sbjct: 61 GAHGDAISFVMQSEGASFIEAVERLAAEAGLEVP-----KPSPAAAEAAKREAELADVLE 115 Query: 125 TF---YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 Y++ L P +AR YL RGL IARF +G++ G ++ Sbjct: 116 AAAAEYRRRLALPEGEAARAYLAARGLDAPTIARFGLGWSGEGRGSLRAALARQGIAESR 175 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 L++AG++ ++G + D F RVMFPIRD+ GR++ FGGR+LG+ PKYLN PET +F K Sbjct: 176 LVEAGLMKQGERG-AVDYFYGRVMFPIRDRAGRMVSFGGRLLGDGQPKYLNGPETALFSK 234 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 R LYG+ A+ L+VVEGYMDV+ALA G AVA LGT+ T H++ L+R + Sbjct: 235 RRTLYGIDTARPAIRAGAALIVVEGYMDVIALAAAGFEGAVAPLGTALTESHLEELWRLS 294 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C DGD AGR AA RA+E AL +T R L + LP +DPD+ +R+EG AF AR Sbjct: 295 PRPILCLDGDAAGRRAALRAIELALKQLTPDRGLAVLTLPGADDPDSFIRREGAAAFAAR 354 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRA----RLSTLAL-----PLISQVPGETLRIYL- 411 + L+ L+ L D +TP+GRA RL +A L + G L + Sbjct: 355 LAAVPSLADTLYLLLAESADQATPEGRAALRHRLEEVARTIEDKALAGEYRGALLDRFFA 414 Query: 412 ----RQELGNKLGILDDSQLERLMPKAA--------ESGVSRPVPQLKRTTMRILIGLLV 459 RQ G G D R P A + V +L+R R+L G+L+ Sbjct: 415 ARRGRQAAGRAPGRAPDRASGR-APAGAPPRPLGLPRPSIDPSVARLRRA--RMLTGILI 471 Query: 460 QNPELATLVPPLEN 473 +P+ L+P LE Sbjct: 472 AHPD---LLPALEE 482 >UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34_ACIFE Length = 603 Score = 279 bits (713), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 152/409 (37%), Positives = 221/409 (54%), Gaps = 7/409 (1%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 D++ ++ V LK++G + CCPFH EKTPSF V+ + +HCFGCGA G+ ++M Sbjct: 19 ADLLTIVSETVSLKRRGTQYWGCCPFHGEKTPSFKVDPARGLFHCFGCGAGGDVFSYVMK 78 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSL-QQPV 135 D L F E +++LA + + VP A S + + + D + F+ L Sbjct: 79 RDNLTFPEALKQLAEKYGIPVPERAKSAREIAREKESREVMGANDLASRFFHSCLVNTRY 138 Query: 136 ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG- 194 QYL RG+ ++I F +G APP + + + L+ AG++ +G Sbjct: 139 GERGIQYLAGRGIGRDIIDSFGLGLAPPDFQTLSTALEKRGVTEEVLLKAGLVSPRQRGT 198 Query: 195 RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP--KYLNSPETDIFHKGRQLYGLYEAQ 252 R YD+FR RVM PIRD RGRV+GF GR+L D KY+N+PET FHKG L+GL A Sbjct: 199 RVYDKFRARVMIPIRDPRGRVVGFTGRILDKDASPAKYMNTPETAWFHKGNLLFGLDRAS 258 Query: 253 QDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDR 312 + + L+VEG+MD ++L GI++AVAS+GT+ T LL R T V+ C+D DR Sbjct: 259 GPIRKRQQALIVEGHMDAISLHAAGIDWAVASMGTAFTEHQAALLKRLTPEVVFCFDSDR 318 Query: 313 AGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFL 372 AG AA RA+ AL G + R M + DG+DPD +RKEG+EAFE + A P + Sbjct: 319 AGLAAAMRAIPLAL---QAGLKCRVMHVTDGKDPDEFIRKEGREAFEELLNNAKPGMDYQ 375 Query: 373 FNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++++ + DL T G+ LPL + +EL +L I Sbjct: 376 VDTVLGECDLETLGGKVEAVDKVLPLFRDCQSDVEVGERIRELSRRLAI 424 >UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I6N0_CLOCE Length = 604 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 150/422 (35%), Positives = 236/422 (55%), Gaps = 6/422 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKNF CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGIISEYVKLEKKGKNFFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN I F+M+ + LEF + + LA + +P + + ++ L Q+ Sbjct: 61 CFGCGKGGNVIHFIMSIENLEFPDALRFLADRAKILIPDMIEGNRNDEKAGLKRELLQIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F++ +L YL R + +A+F +G+A +D + K + Sbjct: 121 LEAARFFRDNLNNDKNKLPNSYLINRKIQKNTVAKFGLGYAEDRFDTLYKHLKAKGFSDT 180 Query: 181 SLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 S+ ++G+++ ++ G YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET+++ Sbjct: 181 SIKNSGLVIYKEESGNIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+ LY L A+ N RL++ EGYMDV++L Q GI +VA LGT+ T + +LL + Sbjct: 241 HKGKHLYALNFAK--NTCSRRLILAEGYMDVISLHQSGILNSVAPLGTALTENQGRLLKK 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +D D AGR AA+R+L+ G ++ + +P G+DPD ++ G F+ Sbjct: 299 YTEEIVLSFDSDSAGRAAAFRSLDLLNEI---GCNVKVLTIPSGKDPDEFIKAYGVAEFK 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L +L Sbjct: 356 RLVDRSESLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSEEL 415 Query: 420 GI 421 G+ Sbjct: 416 GV 417 >UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A142_PELCD Length = 604 Score = 278 bits (712), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 173/451 (38%), Positives = 248/451 (54%), Gaps = 19/451 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRI + ++ AR DIV++I + V LK+ G+N CPFH EKTPSF VN ++Q YH Sbjct: 1 MSGRIADEKVEEIRARADIVEVISSYVSLKRSGRNHVGLCPFHAEKTPSFNVNADRQIYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLMN + L F E V L + +EV EA S + R +R+ L ++ Sbjct: 61 CFGCEVGGDVFAFLMNIEGLAFPEAVRRLGERYGIEVEEEAVSPEEEQRREERERLLRVT 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWD---NVLKRFGGNP 176 + FY L + P AR YL +RG ++ +F +G+AP W+ N L+ G + Sbjct: 121 EVACDFYHNLLLKDPSGKPARGYLRRRGFDGDIARQFRLGWAPAAWEALANHLRDKGFDS 180 Query: 177 E---NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233 + +R L+ AG ND YD FR R++FPI D+RGR + FGGR+L D PKY+NS Sbjct: 181 KWARDRLGLVRAGNEGRND----YDLFRRRLLFPILDERGRPVAFGGRILEGDGPKYINS 236 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PE+ I+HK R LYGLY+A+ +VVEGY D +AL + G VA+ GT+ T +H Sbjct: 237 PESPIYHKARVLYGLYQARDAMRHKGEAIVVEGYFDQLALYRAGFQNTVATCGTALTPEH 296 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 ++LL R V+ +D D AGR A +RA++ LP +G Q + L GEDPD+ +R Sbjct: 297 VRLLKRFAERVLLLFDQDEAGRKATFRAMDVLLP---EGLQALVVTLDAGEDPDSFLRNH 353 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 + +AR+ A P+ + Q +GRAR L + +PG+ R + Sbjct: 354 DAQKMQARLASARPVVEVFIERTLEQHGEDI-EGRARAVEKILAKLRLLPGDIERDLYLK 412 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVP 444 +L ++ G+ D QL L KA V P P Sbjct: 413 DLASRTGL--DEQL--LRSKALPQAVPDPAP 439 >UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K885_THEP3 Length = 595 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 149/383 (38%), Positives = 212/383 (55%), Gaps = 14/383 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I ++ DI+D+I V+LKK GK F CPFH EKTPSF V+ EKQ YHCFGC A GN Sbjct: 8 IEKVIEANDIIDVISEYVELKKAGKEFKGLCPFHREKTPSFMVSQEKQVYHCFGCNASGN 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL----YQLMDGLNT 125 + F+M+ + L F E +E LA + + E + +QR+ L Y++ Sbjct: 68 VVTFIMDIENLTFKEAIEFLA--DRVGITLEETVLTER--EYQRKKLIDEIYKVNKLATM 123 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++ L A Y+ KRGL+ I +F IG++ P + +L L+ A Sbjct: 124 YFYNKLFSEEGRQALTYIRKRGLTEATIKKFGIGYSSPHGNGLLNFLKEKGYTESFLVKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+L + R YDRFR RVMFPI D +G VIGFGGR + + PKYLN+PET++F KG+ L Sbjct: 184 GLL-SQKNNRYYDRFRNRVMFPIIDVKGNVIGFGGRSIDDSLPKYLNTPETEVFKKGKTL 242 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 + + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R NV+ Sbjct: 243 FAINFAKK--TQQDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRYKGNVV 300 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA R L+ ++ + +P G+DPD ++KEG AF +E A Sbjct: 301 IAYDADEAGISAALRGLDILDEL---NLNIKVLTIPYGKDPDEFIKKEGVNAFNQLIENA 357 Query: 366 MPLSAFLFNSLMPQVDLSTPDGR 388 L F +DL P R Sbjct: 358 DSLIEFKAKVFRKNLDLDNPQDR 380 >UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_PELTS Length = 630 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 165/400 (41%), Positives = 230/400 (57%), Gaps = 13/400 (3%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP I + +DIV+++ V L+K+GK F CPFH++++PSFTV +KQ +HCF Sbjct: 2 GFIPDDIIETVRLNSDIVEVVSRYVSLRKKGKYFTGSCPFHSDRSPSFTVTPDKQIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC A G+ FLM + L F E V LA + +P A P+ ER +++ L Q ++ Sbjct: 62 GCNAGGDVFKFLMLKENLTFYEAVSMLARRAGIALP--AREDPAGPERDRKKALLQRIND 119 Query: 123 L--NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWD---NVLKRFGGNPE 177 L + FY+ + A AR+YL +RGLS EV+ RF IGFA PGW + L R G P Sbjct: 120 LAKDFFYENLRRHEAAAEARRYLAERGLSGEVLDRFQIGFALPGWSALLDFLSRKGCQPH 179 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + +AG+ V D GR YDRFR R++FPI D GRV+GFGGRVL PKYLN+PET Sbjct: 180 DAA---EAGLAVKGDSGRYYDRFRNRIIFPIWDPVGRVVGFGGRVLDGSLPKYLNTPETP 236 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 F KGR LYGL+ A+ E + +VVEGYMD V +G VASLGT+ TA+ +LL Sbjct: 237 FFSKGRILYGLHLARPAIRERDCAVVVEGYMDAVTAHLHGAANTVASLGTALTAEQGRLL 296 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + NV+ YD D AG AA R ++ G Q+R +PDG+DPD +R++G ++ Sbjct: 297 INYSRNVVIAYDADAAGVAAAMRGMDL---LQELGFQVRVATIPDGKDPDEYIRRQGIQS 353 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALP 397 +E + +A L + M + + T G+ + P Sbjct: 354 WEKLIGEAPSLIEYKLQKAMEKGPVRTVTGKLEVMRQVFP 393 >UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1NI78_9DELT Length = 599 Score = 278 bits (710), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 156/430 (36%), Positives = 233/430 (54%), Gaps = 8/430 (1%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DI ++I V L++ G N CPFH EKTPSF VN + +HCFGCG G+ FLM Sbjct: 28 ADIAEVIGEHVTLQRAGANLKGLCPFHAEKTPSFMVNPGRGSFHCFGCGEGGDVFSFLML 87 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSL-QQPV 135 Y ++ F E +++LAA +++ + + S + E QR+ LY + Y + L P Sbjct: 88 YHRVGFPEALKQLAARYHIPLAETSLSPQQREEARQREALYAINARAAALYHRFLLHDPA 147 Query: 136 ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG- 194 A ARQYL +RG++ +I RF +G+APP WD + K + AG+L + + G Sbjct: 148 ADQARQYLAQRGMTAAIIERFQLGYAPPRWDFLRKTLEREKFTPATAAQAGLLASKESGG 207 Query: 195 -RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQ 253 YDRFR+R++FPI D+ GRV GFGGR+LG PKYLN+ ET IF K R LYGL++ + Sbjct: 208 GHYYDRFRQRIIFPIIDQTGRVAGFGGRILGEGEPKYLNTAETPIFDKSRILYGLHQHRD 267 Query: 254 DNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRA 313 + L+VEG D++ALA G+ VA LGT+ TA +++L V+ +DGD A Sbjct: 268 ALRKARSCLLVEGNFDLLALAAGGVEEVVAPLGTALTAGQLRILRGYVEEVVLLFDGDSA 327 Query: 314 GRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLF 373 G AA RA+ L G R LP G+DPD+ +R G++ + + + L+ F+F Sbjct: 328 GLKAAMRAVPLFLAEKLSG---RVAVLPQGQDPDSYIRAHGRQGLQELLAEGQSLAEFVF 384 Query: 374 NSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQELGNKLGILDDSQLERLMP 432 + L + L +G+ R+ P++ ++ + LR +LGI + + Sbjct: 385 SRLAAEHGLGV-EGKNRIIAELAPMVHELNDQHLLRTRFIAHFSERLGISSQQFGQSIGR 443 Query: 433 KAAESGVSRP 442 AA V+ P Sbjct: 444 PAARRPVATP 453 >UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU Length = 603 Score = 276 bits (706), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/438 (35%), Positives = 233/438 (53%), Gaps = 15/438 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP ++ + DIV++I V+LKKQG+N+ CPFH E TPSF+V+ +KQ +H Sbjct: 1 MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSFSVSPDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP----FEAGSGPSQIERHQRQTL 116 CFGCGA GN FL + F E+V LA + ++ P +G+ P E Q + Sbjct: 61 CFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDDITVHSGARP---ESSGEQKM 117 Query: 117 YQLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 + + L FY L A YL RG + E+I F IG+A WD + K Sbjct: 118 AEAHELLKKFYHHLLINTKEGQEALDYLLSRGFTKELINEFQIGYALDSWDFITKFLVKR 177 Query: 176 PENRQSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 + + AG+L+ + G Y DRFR RVMFPI D G V+ F GR LG+ PKY+NSP Sbjct: 178 GFSEAQMEKAGLLIRREDGSGYFDRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSP 237 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +FHK + LY Y+A+ + R ++ EG+ DV++ + ++A++GTS T DH+ Sbjct: 238 ETPLFHKSKLLYNFYKARLHIRKQERAVLFEGFADVISAVSSDVKESIATMGTSLTDDHV 297 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 ++L R +I CYD D+AG +A +A E G ++R +PDG DPD ++K G Sbjct: 298 KILRRNVEEIILCYDSDKAGYEATLKASEL---LQKKGCKVRVAMIPDGLDPDDYIKKFG 354 Query: 355 KEAFEAR-MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR-IYLR 412 E F+ ++ ++ + AF +LS R L IS + G + +Y++ Sbjct: 355 GEKFKNDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLKEISTLSGSLEQEVYVK 414 Query: 413 QELGNKLGILDDSQLERL 430 Q L ++ + +S E+L Sbjct: 415 Q-LASEFSLSQESLTEQL 431 >UniRef50_C3XNR6 DNA primase n=1 Tax=Helicobacter winghamensis ATCC BAA-430 RepID=C3XNR6_9HELI Length = 559 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 159/477 (33%), Positives = 261/477 (54%), Gaps = 34/477 (7%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I+ L + DI+++I +++KK G ++ ACCPFH EKTPSF VN K FYHCFGCGA G+ Sbjct: 7 IDALKNQLDILEVISHYIEVKKMGSSYKACCPFHQEKTPSFVVNANKGFYHCFGCGASGD 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 +I F+M Y+KL + E +E+LA ++N+ + + ++ Q Y++MD +N +YQ Sbjct: 67 SIKFVMEYEKLNYAEAIEKLAQLYNVRLEYS--------QKSQNNENYKIMDFMNGYYQT 118 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML- 188 L V + Y+++RG++ E+ ARF +GFAP + ++ N N Q ++ G+L Sbjct: 119 MLNAEVES----YIKQRGITTEIKARFELGFAPQNHE-IMAHLQRNMVNLQDALNFGILG 173 Query: 189 --VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 + N R Y R +R++FPIR + ++IGFGGR L N KY+NSP+T +F+K + LY Sbjct: 174 VDLENGVKRYYARLTQRLIFPIRSAQNKIIGFGGRTLVNHPAKYINSPQTKLFNKSQVLY 233 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 G +A++ +++ EGY+DV+ L Q G AVA+LGT+ T +H+ LL + VI Sbjct: 234 GYPQAKESIYRLESVIITEGYLDVIMLHQAGFTNAVATLGTALTKEHLPLLAKGNPKVIL 293 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 +DGD AG AA++A A +Q + G DP +V+ E ++ + + Sbjct: 294 AFDGDNAGMQAAFKA---ASLLSIAKKQGGVVLFEGGLDPADMVKNSEIEELKSLFDSPI 350 Query: 367 PLSAFLFNSLMPQVDL---STPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 PL ++ S++ + DL + D + L +S V E +++L Q L L Sbjct: 351 PLIDYVLESIIKRYDLQNAAQKDDCLKEILEYLHQLSPVIQEEYKLWLSQRLA-----LP 405 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTM-----RILIGLLVQNPELATLVPPLENLD 475 ++ PKA +++ + + +I+I +++N EL V L+ LD Sbjct: 406 AHLIQTKKPKAQNQSITKESLRFSEASFYDLPEKIIIKSVLENMELLGFV--LDYLD 460 >UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_EUBR3 Length = 590 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 157/440 (35%), Positives = 237/440 (53%), Gaps = 7/440 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 I ++ +R DIVD+I + V L+K+G + CPFHNEKT SF+V+ KQ Y+CFGCGA G Sbjct: 8 LIEEVRSRNDIVDVIGSYVHLQKKGSTYFGLCPFHNEKTGSFSVSPNKQMYYCFGCGAGG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 N FLM Y+ F E ++ELA +E+P + + + E +R L ++ ++ Sbjct: 68 NVFTFLMQYENFTFPEAMQELADRVGIELPKQEMTSAQRREADRRTQLLEINKEAAKYFY 127 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 L+ P A +Y +KR LS E + +F +G++ D++ K + + L + G++ Sbjct: 128 MLLRGPRGQRAHEYFKKRELSDETMQKFGLGYSDQYSDDLYKYLRSKGYDDEILKETGLV 187 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL 248 ++ +D+F R MFPI D RVIGFGGRV+G+ PKYLNSPET IF K R LYGL Sbjct: 188 TIDEVRGGHDKFWNRAMFPIMDVHNRVIGFGGRVMGDGEPKYLNSPETKIFDKSRNLYGL 247 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 A+ + N+LL+ EGYMDV+AL Q G + AVASLGT+ T+ H LL R TN V Y Sbjct: 248 NIAR--STRKNQLLLCEGYMDVIALHQAGFDNAVASLGTALTSGHASLLKRYTNEVYLTY 305 Query: 309 DGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 D D AG AA R A+P + + G + + + +DPD ++ G + +E R+++A Sbjct: 306 DSDGAGVKAALR----AIPILKEVGITTKVINMRPYKDPDEFIKALGAQEYEERIKKAEN 361 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 F + D+ P+ + + E R Q + + I D Sbjct: 362 SFMFQIRIMQAGYDMDDPESKTAFYNEIAKKLLGFTEELERTNYTQAVSREYSIPYDDLR 421 Query: 428 ERLMPKAAESGVSRPVPQLK 447 + + A + G+ +P +LK Sbjct: 422 KLVNSMAMKGGIVKPQTKLK 441 >UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteriaceae RepID=C7MNL3_CRYCD Length = 642 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 163/430 (37%), Positives = 237/430 (55%), Gaps = 12/430 (2%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I + A TD+V L RV L+++G++F CCPFH+EK+PS ++ Q ++CFGC HG+ Sbjct: 12 IQKVRAATDLVSLFSERVPLRQRGRDFWCCCPFHDEKSPSCKIDPATQQFYCFGCHEHGD 71 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M + ++F + V LA ++E+ G G + R ++ L + FY Q Sbjct: 72 VFSFVMKTEDIDFPDAVRRLADRAHIELHESGGRG--GVSRSYKERLRGVCQETRDFYHQ 129 Query: 130 SL---QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L + P A +AR YL RGL +V A + +GFAP G +++ + ++DA Sbjct: 130 QLMRLKSPEADAARSYLASRGLGGQVPAHWHLGFAP-GHGVLMRHLRSRGYTVKEMVDAN 188 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 ++V+ D DRF R+MFPI D++G I FGGRV+G+ PKYLNS +T +FHK L+ Sbjct: 189 VVVSRDNATPRDRFFNRIMFPIHDEQGECIAFGGRVVGSGEPKYLNSQDTPLFHKSNILF 248 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR-ATNNVI 305 GL A+ + +VVEGY DV+AL++ G+ VA+LGT+ T HI+ L R A VI Sbjct: 249 GLDAAKAAMTASGQAIVVEGYTDVIALSEAGVKNVVATLGTALTTQHIRSLSRHAGQRVI 308 Query: 306 CCYDGDRAGRDAAWRAL----ETALPYMTDGR-QLRFMFLPDGEDPDTLVRKEGKEAFEA 360 +DGD AG+ A RAL E+ P R L LPDG DP V K G + A Sbjct: 309 YLFDGDEAGQRATDRALGFIDESMTPEAGKVRIDLLACTLPDGLDPADFVDKYGADELRA 368 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++QA PL AF + + Q DLSTP+GR AL L++ + L ++ +L Sbjct: 369 ELKQAKPLIAFGIDRHLAQFDLSTPEGRTAAFADALALLAPIKDSLLAQDYAVQIAGRLH 428 Query: 421 ILDDSQLERL 430 +D LERL Sbjct: 429 FREDDALERL 438 >UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PRIM_SYNE7 Length = 694 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 154/413 (37%), Positives = 239/413 (57%), Gaps = 8/413 (1%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 R DIVD++ +V LKK+GK+F CPFH++K+PSFTV+ KQFY+CF CGA GN I FLM Sbjct: 17 RADIVDIVSEQVVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFSCGAGGNPIKFLM 76 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH--QRQTLYQLMDGLNTFYQQSLQQ 133 K F E V +LA + + V +++R +R+ LY+++ FY+QSL++ Sbjct: 77 ELGKQSFSEVVLDLAKRYQVPVRTLEVQQHQELQRQLSRRERLYEVLAVATQFYEQSLRR 136 Query: 134 PVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID-AGMLVTN 191 P +A YL + R L I +F +G+AP W ++ L++ AG++V Sbjct: 137 PEGAAALDYLRRSRQLQESTIQKFQLGYAPAQWASLATHLIEQKRFPADLVEEAGLVVAR 196 Query: 192 DQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYE 250 G+ Y DRFR+R+M PI D +GRV+GFGGR L + PKYLNSPET +F KG+ L+GL + Sbjct: 197 RNGQGYYDRFRDRLMIPIHDLQGRVVGFGGRTLTGEEPKYLNSPETTLFEKGKLLFGLDK 256 Query: 251 AQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR--ATNNVICCY 308 A+ A+ ++ +VVEGY DV+AL GI++AVASLGT+ + ++LL R +N ++ + Sbjct: 257 ARAAIAKQDQAVVVEGYFDVIALHAAGIDHAVASLGTALSRQQVKLLSRYSESNQIVLNF 316 Query: 309 DGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 D DRAG AA RA+ G+ QLR + LP G+D D +++ + + ++ Sbjct: 317 DADRAGAKAAERAIGEVEDLAYQGQVQLRVLNLPGGKDADEYLQRHSVADYRELLARSPL 376 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + + L+ +L D + + L+ ++P LR + ++ +L Sbjct: 377 WLDWQIDQLLRDRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQVAERLS 429 >UniRef50_D0RRQ9 DNA primase n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RRQ9_9RICK Length = 581 Score = 275 bits (702), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 175/580 (30%), Positives = 293/580 (50%), Gaps = 33/580 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + P+ +I+++ R + D++ +V LKK+GK F PF NEKTPSFTVN EK FYHCF Sbjct: 2 KYPKTYIDEIRNRLKVSDVVRLKVNLKKRGKEFIGLSPFKNEKTPSFTVNDEKGFYHCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH--QRQTLYQLMD 121 HGN DF+M + L F E V+ LA ++ P+ +IE+ + Q L+++ Sbjct: 62 TAEHGNIFDFIMKLENLNFGEAVKMLAQRAGMQ-PYRFTKEDEKIEKENLRIQKLFEIY- 119 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 N + Q T + YL RGL E I F +GF + + N Sbjct: 120 -FNQCKEDLFSQYKDTHLK-YLIDRGLKIETINYFKLGFCENS-KKIQNKLFENGFTSDE 176 Query: 182 LIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGR-VLGNDTPKYLNSPETDIF 239 LI +GM D +RF+ R+ FPI++ IG GGR VL N KY+NSPET+ F Sbjct: 177 LIKSGMYYKKDGTDELVNRFKNRITFPIQNYYNNFIGCGGRTVLANALAKYINSPETNFF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG L+ L A++++ N L++VEGYMDVV+L GI A+LGT+ T I L ++ Sbjct: 237 KKGFNLFNLNNAKKESLNSNNLILVEGYMDVVSLFNKGIKNVSATLGTAMTTSQISLAWK 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + +I C+DGD++G DA++RA E L + G+ + F +P+ +DPD V + GKE F Sbjct: 297 NFDKIIICFDGDQSGIDASYRAAERILKILKPGKDIYFAKIPNSQDPDDFVNQFGKEGFN 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + + Q+ L +FN V+ S P A L + ++ + + Y++ NK+ Sbjct: 357 SLISQSKDLVDVIFNHHALGVNKSKPSDIALLEKKLFNIADEIEDQISKKYIKSAFKNKI 416 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRIL-----------IGLLVQNPELA-TL 467 E ++ K + S+ ++K+ ++R++ I L++ PE + + Sbjct: 417 -------FENIIKKKNYNSQSQ--EEIKKASLRLMLSKEEIVELSFINLILNYPEFSESK 467 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 + + L+ N EL+N+ +++ + T + L+ N A+ ++K+ M+ + Sbjct: 468 IEDISLLEFNFKESNIFISELINSLVNE-NIKTKEDLKKKLTINFASFIKKIEMYSNNKS 526 Query: 528 --KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN 565 N+ ++++ + N D L ++ + I+ + L N Sbjct: 527 IIVNLNDESYLNFFNDYVDELNVAKKNKQISSLESELLKN 566 >UniRef50_D0SWX0 DNA primase n=2 Tax=Acinetobacter RepID=D0SWX0_ACILW Length = 640 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 152/380 (40%), Positives = 230/380 (60%), Gaps = 18/380 (4%) Query: 98 PFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFA 157 PF + E Q LY L++ + FY++ L P + SA+QY ++RGL+ E IA + Sbjct: 162 PFASFEHLPMAEVQQDGNLYDLLENIAQFYERQL--PNSPSAQQYFKQRGLTTETIAYWR 219 Query: 158 IGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIG 217 +G+AP W ++ K F P++ + L G++ T+D GR +D RERV+FPIRD +GRV+G Sbjct: 220 LGYAPEDWQHLEKAF---PQDIEGLKLLGLIRTSDSGRDFDLLRERVIFPIRDTKGRVVG 276 Query: 218 FGGRVLGNDT-PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY 276 FGGR L ++ PKY+NSP++++FHK + LYGLYE ++ A+ L+VEGYMDV+AL QY Sbjct: 277 FGGRALNDEIKPKYINSPDSEVFHKNQLLYGLYEGRKQKAQ--EWLMVEGYMDVIALQQY 334 Query: 277 GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLR 336 GI+ AVA+LGT++ DH+ +LF+ +N + +DGD AG+ AA R L+ ALP + DGR+L+ Sbjct: 335 GIHGAVATLGTASNTDHLNILFKQSNRLTIAFDGDAAGQKAARRTLDIALPLLNDGRELK 394 Query: 337 FMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLAL 396 F LP DPD+L+R+EG E F +EQA +S F+F L D++TP+G++++ Sbjct: 395 FFVLPADHDPDSLIRREGIENFRRLLEQAPLMSDFVFAHLTQNQDITTPEGKSQVMGELK 454 Query: 397 PLISQVPGE-TLRIYLRQELGNKLGILDDSQLERLMPKA-AESGVSRPVPQLKRTTMRIL 454 L +P + R L+Q KLG + PK ++ +S K + Sbjct: 455 NLTELLPKHGSFRYLLQQFFREKLGF-----NRKWQPKVNTDASLSFST---KIDAEEYV 506 Query: 455 IGLLVQNPELATLVPPLENL 474 I +L+ +P L PL L Sbjct: 507 IAILMNHPYLYIHFEPLRAL 526 Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 49/94 (52%), Positives = 68/94 (72%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ I+ +L RTDIVD+I VKLKK G+ + CCPFH EK+PSF V +KQ++HCFGC Sbjct: 3 IPQHTIDQILDRTDIVDVIGQFVKLKKTGRTYSGCCPFHQEKSPSFHVYRDKQYFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP 98 A+GNAI FLM+ FVE +++L++ +E+P Sbjct: 63 QANGNAIRFLMDIGSRNFVEVMKDLSSQTGIELP 96 >UniRef50_B1ZCZ4 DNA primase n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZCZ4_METPB Length = 549 Score = 274 bits (701), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 156/414 (37%), Positives = 227/414 (54%), Gaps = 4/414 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RI I + R + +++ V+LK+ G+ + A PF E+TPSF VN +K F+HCF Sbjct: 3 RITHATIEAIKDRLPVSEVVGGYVQLKRAGREWRALSPFARERTPSFFVNDQKGFWHCFS 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HGNAIDF+M L F E VEELA +EV + + ++ R R + +L+ Sbjct: 63 TGKHGNAIDFVMEMSGLTFPEAVEELAGRAGIEVTRDGITRETEASRAARGSAIELLACA 122 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ + LQ + +A+ YL KRGL + ++ IG+AP +L+ + Q I Sbjct: 123 QDFFVRQLQ--ASEAAQAYLRKRGLRRRIASQLGIGWAPEAGRALLEHLADRGWSTQDAI 180 Query: 184 DAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +AG+ + D D +R R+MFPIR++ VI FGGR + PKYLN ET +F K Sbjct: 181 EAGVATSPDDPSVPVRDFYRGRIMFPIRNRVKEVISFGGRAMDGGMPKYLNGRETALFDK 240 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LY + A+Q + +V+EGYMDV +AQ GI VA +GT+ T +H+ L+R Sbjct: 241 GRVLYHMDRARQAISRNGCAIVLEGYMDVAQVAQAGIENVVAPMGTALTVEHLHALWRVA 300 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 V+ DGD AG AA R L+TALP+++ R++ F LP G DPD LVR G A +A Sbjct: 301 PVVVHIADGDEAGARAADRTLDTALPWVSGDRRIVFGILPTGVDPDDLVRSAGPNALQAV 360 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 + QA ++ L+ L + P+ RA+L T ++ V ET+R EL Sbjct: 361 IRQAQHMAERLWLKLRAETPGDGPEDRAKLETGIRATLAVVGEETMRRAFTDEL 414 >UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS59_DYAFD Length = 674 Score = 274 bits (700), Expect = 8e-72, Method: Compositional matrix adjust. Identities = 145/355 (40%), Positives = 211/355 (59%), Gaps = 9/355 (2%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DIV+++ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFGCGA G++I F+M+ Sbjct: 15 ADIVEVVGDFVSLKKKGANYSACCPFHNEKTPSFNVNPVRQIYKCFGCGAAGDSIKFVMD 74 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVA 136 D + + E + LA +N+EV E + + ++ R++LY +++ +YQ L Sbjct: 75 IDGIGYGEALRYLAGKYNIEVEEEELTDEETLRQNARESLYIILNFAKNYYQHQLHHSDE 134 Query: 137 TSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG 194 A Y +RG + E+ +F +G++ WD+ K + + L AG+L+ + Sbjct: 135 GQAIGLSYFRERGFTSEIRKKFELGYSLDNWDSFSKEALEKGYSAEILERAGLLIHKEGS 194 Query: 195 RS--YDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGRQLYGLYE 250 + YDRFR RV+FPI + G+ I FG R+L D PKYLNSPET+++HK LYG+Y+ Sbjct: 195 HTAGYDRFRGRVIFPIHNIAGKTIAFGARILKTDKNQPKYLNSPETEVYHKSEVLYGIYQ 254 Query: 251 AQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDG 310 A+ + +VEGY DV++L Q GI VAS GTS T + I+L+ R T N+ YDG Sbjct: 255 AKNAIRQLEHCYLVEGYTDVISLHQAGIENVVASSGTSLTVEQIRLIGRFTPNITILYDG 314 Query: 311 DRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 D AG AA R L+ L +G + + PD EDPD+ VR+ G EAF+A ++ A Sbjct: 315 DMAGIKAALRGLDLVL---EEGLNVNVVLFPDNEDPDSYVRRVGAEAFKAHLKSA 366 >UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DW96_METI4 Length = 595 Score = 273 bits (699), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 146/415 (35%), Positives = 232/415 (55%), Gaps = 5/415 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 FI + DIV+++ V LK+ G F + PF EKTPSF V+ +KQ + CF G G Sbjct: 9 FIEKVRQANDIVEVVSEYVVLKRAGSKFKSLSPFKKEKTPSFFVDPQKQLFKCFSSGYGG 68 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 DF+M Y+KL+F+ ++ LA L P Q+Q L++L + + ++ Sbjct: 69 TVFDFIMYYEKLDFIGALKHLARRAGLSFPSSFRYEEQNESLRQKQKLWELHEAVAEYWT 128 Query: 129 QSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 + L +P AR YL++R + + F +G+A WD +L+ + L AG+ Sbjct: 129 KILVDEPSGEPARAYLKERNIDLCIAKEFGLGYALNSWDGLLRWASTKKGLLEMLEPAGL 188 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGRQLY 246 ++ + + YDRFR R+MF I D+ G+V+GF GR++ G PKYLNSPE+ IF KG+ LY Sbjct: 189 VIRTEHSKIYDRFRGRLMFRITDEAGKVVGFSGRLIEGEQGPKYLNSPESPIFTKGKILY 248 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 G ++A++ AE + ++ EG++D++ L G + AVA+ GT+ T LL R + V Sbjct: 249 GFHKAKRAIAETGKAILCEGHIDLIRLHAAGFSTAVATQGTALTEHQAGLLKRFCSEVFV 308 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 YDGDRAG +AA RA E L +G +++ LP GEDPD+L+ K+G+EAFE +E+A+ Sbjct: 309 AYDGDRAGEEAALRASEILL---AEGLEIKIAQLPPGEDPDSLISKKGREAFEKVLEEAL 365 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 P +F+ N + G+++++ L+ ++ R E+ +LGI Sbjct: 366 PYPSFVLNKACLEYSPQQAFGKSKIAEKMAGLLIKISDPVRRHTASLEVAARLGI 420 >UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY28_ALIAD Length = 601 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 222/401 (55%), Gaps = 11/401 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P FI+ L + DIV++I V L+K G+++ CPFHNE+TPSF+V+ E+Q YHCFGC Sbjct: 3 VPETFIDTLRQKVDIVEVISEYVPLRKSGRSYVGLCPFHNERTPSFSVSPERQVYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL- 123 GA G FLM+ + + F ETV LA + +P ++ P+ R R Y+ L Sbjct: 63 GAGGTVFRFLMDIEGISFAETVTLLAERCGIPLP-DSLHAPAP--RSPRLERYRQAHDLA 119 Query: 124 -NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F + A YL RG+S +A F +G+APP ++ + + L Sbjct: 120 AKAFNHILMNTDAGVQALHYLLSRGISRTTMATFQLGYAPPSGRAMMSFLQQKGFSAEEL 179 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHK 241 I G+ V + G DRFR RV+ PI D+RG+V+ FG R L +D PKYLNSPE ++FHK Sbjct: 180 IACGLAV-DLGGELVDRFRGRVIIPIADRRGQVVAFGARALDDDAKPKYLNSPEYELFHK 238 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR L+ ++ A++ R L++EGYMDV+A+AQ GI AVA+LGTS T + QLL Sbjct: 239 GRMLFNVHRARKAIRRERRALLLEGYMDVLAVAQAGIECAVATLGTSLTEEQAQLLKADC 298 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + V+ YDGD AGR A RA+E LR LPDG DPD +R G AFE Sbjct: 299 DKVVIAYDGDEAGRKATVRAIEVLEQAGVTPVVLR---LPDGMDPDEYIRAHGARAFERM 355 Query: 362 MEQAMPLSA-FLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 + ++ + FL + + + +P GR L L+++ Sbjct: 356 LSESTWTAVQFLIEDMRARAEWVSPAGRTEFLRQVLRLLAE 396 >UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_ENTFA Length = 628 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/370 (40%), Positives = 212/370 (57%), Gaps = 14/370 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP+ I ++ RT+IVD+I V+LKK GKN+ CPFH E++PSF+V +KQ +H Sbjct: 1 MAQRIPQEVIEEVRHRTNIVDIIGQYVQLKKSGKNYMGLCPFHEERSPSFSVAEDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQI----ERHQRQTL 116 CFGCG G +FL + + F E+V+ +A + +L V F+ S P ++ E QR++L Sbjct: 61 CFGCGKGGTVFNFLQEIEGISFPESVKRVADLEHLSVDFD-WSEPREVADTPENQQRRSL 119 Query: 117 YQLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 QL Y L + A YL +RGL+ E+I F IGFAP D + + F Sbjct: 120 LQLHSKAAELYHHILVNTKIGEPALNYLLERGLTQELIETFQIGFAPQKRDFLSQVFKNE 179 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL------GNDTPK 229 + +G+ V D G DRF +R+MFPI D +G VI F GR+L G++ PK Sbjct: 180 QLDETLFEPSGLFVQRDNGTFLDRFYQRIMFPINDPQGNVIAFSGRLLKTADFPGDEMPK 239 Query: 230 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 YLNSPET +F+K L+ A+++ + N +L+ EG+MDV+A Q G+ VAS+GTS Sbjct: 240 YLNSPETTLFNKRETLFNFDRARKEIRKENTVLLFEGFMDVIAAWQSGVKSGVASMGTSL 299 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 T + I+ L R V+ CYDGD AG A RA++ L L + +P+ DPD Sbjct: 300 TNEQIRRLERVAKEVVICYDGDNAGVQATNRAIQ--LLQENSHFDLSIVSIPEKLDPDEY 357 Query: 350 VRKEGKEAFE 359 VRK G EAF+ Sbjct: 358 VRKYGAEAFQ 367 >UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5_LACCB Length = 595 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 151/447 (33%), Positives = 240/447 (53%), Gaps = 15/447 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP ++ +L +I D I V+L+K G+N CPFH E TPSF+VN KQ +HCF C Sbjct: 2 IPEATVDKVLKAVNIADYIGQYVQLRKTGQNLFGLCPFHEEHTPSFSVNEPKQIFHCFSC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIERHQRQTLYQLMDGL 123 G GN F+M+YD F E V+++A + + + G + P E ++Q + Q D Sbjct: 62 GRGGNVFKFVMDYDNATFPEAVKKVADFAGMPLDVQVGHAAPVDPEISKQQHILQ--DTA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + F+ + +A YL KRGL+ + I F +G+AP + ++ + Q Sbjct: 120 DLFHHILMNTEKGQTALDYLHKRGLTDDTIEAFQLGYAPEERNLLVAFLNNRKVDYQDQR 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHK 241 +G+ V + +G+ +DRF +RVMFP+ D G+VIGF GR+L D KYLNSPET +F+K Sbjct: 180 ASGLFVEDQEGKLFDRFNDRVMFPLTDSHGQVIGFSGRILSKDKTQAKYLNSPETKLFNK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L+ L+ A+ D ++ EGYMDV+A Q G+ +AS+GTS T + + ++ + Sbjct: 240 RDVLFNLHRAKADFGRDGGPILFEGYMDVIAAYQAGVKTGIASMGTSLTTEQVDIISHLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLR--FMFLPDGEDPDTLVRKEGKEAFE 359 + CYDGD G+ +A+E A+ + D +L+ + LPDG DPD +R G EAF+ Sbjct: 300 KRLTVCYDGDEPGQ----KAIERAVAMLADHPRLQTDVVVLPDGMDPDEFIRARGAEAFQ 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A+++ + +AF+ L VD++ + AL I ++ R ++L + Sbjct: 356 AQVKSVLTPTAFMLQFLARGVDMNNDQAKLTYLNAALKTIGKISNPVARAVYVKQLADTT 415 Query: 420 GILDDSQLERLMP---KAAESGVSRPV 443 G+ +S L + +P +A S PV Sbjct: 416 GV-PESALNQSLPAPQQAVPQQSSAPV 441 >UniRef50_Q6AQ52 Related to DNA primase (DnaG) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ52_DESPS Length = 617 Score = 273 bits (698), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 149/422 (35%), Positives = 233/422 (55%), Gaps = 18/422 (4%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 R DIV +I V+L++ G + CPFH EKTPSF+V +QF+HCFGCG G+ + ++M Sbjct: 14 RADIVQIIGETVELRRSGSRYVGLCPFHGEKTPSFSVTAGEQFFHCFGCGESGDVLSYVM 73 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQ-QP 134 Y L F E ++ LA + + +P S + +R+ ++ L + + Y Q L+ Sbjct: 74 KYYALSFPEALKMLAERYGVVLPERKQSAQEKALAEKRKKMFALNEKVAAIYGQYLRTNR 133 Query: 135 VATSARQYLEKRGLSHEVIARFAIGFAPP----GWDNVLKRFGGNPENRQSLIDA---GM 187 A +AR YL +RG+ ++ A + + +AP GW F G ++ L+ A G+ Sbjct: 134 GAGAARDYLVRRGVGKKISADYGLCYAPSQDVEGW-----HFLGGHLAKEELVLAAELGL 188 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + + G YDRFR+R++FPIRD G++ GFGGR++G PKY+NSPE+ IF+K L G Sbjct: 189 VSAKENGGYYDRFRDRILFPIRDIAGQICGFGGRIIGEGQPKYMNSPESLIFNKSSLLLG 248 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 LY+ ++D ++ VEG D+++L G+ VA LGT+ T +H++L+ R + Sbjct: 249 LYQQKEDIRRAGSVVFVEGNFDLISLVGAGVKNVVAPLGTALTREHLRLVKRFAEGAVML 308 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 +DGD+AG AA R++ ++ + + LP+GEDPDT VR+ G + +A P Sbjct: 309 FDGDKAGVQAAVRSVPL---FLGENLMGKVSLLPEGEDPDTYVRRHGGRGILELLAEASP 365 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 L F F +L+ + LS DG++R+ PL+ R + KLG LD L Sbjct: 366 LPEFAFENLVQEHGLSL-DGKSRVIEGLKPLVQAATSSLQRSVILSHFAEKLG-LDVISL 423 Query: 428 ER 429 ER Sbjct: 424 ER 425 >UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW9_ELUMP Length = 578 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 174/493 (35%), Positives = 260/493 (52%), Gaps = 25/493 (5%) Query: 9 FINDLLARTDIVDLIDARV-KLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 I ++ R DIV+L+ V LK+ GK + CCPFHNEKTPSFTV+ ++ ++CFGC Sbjct: 5 IIEEIRDRVDIVELVREYVPSLKRAGKTYKGCCPFHNEKTPSFTVSQDRGLFYCFGCQTG 64 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 G+ FLM + L F E ++LA LE ++ +Q E++ R +L+D FY Sbjct: 65 GDVFAFLMKTENLSFSEAAKKLAERAGLE--WKKEEVLTQEEKN-RLEARKLLDFAKVFY 121 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 ++L AR YL+KR L+ E + +F IGF P G D + K N N L AG+ Sbjct: 122 NKTLLSSQGNEARGYLKKRSLTKETVEKFEIGFTPQGVDALSKAALANGYNANLLRSAGL 181 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 G D FR R+MFPI + RG +GFGGR+ G PKYLNSPET +F K R LYG Sbjct: 182 AAQGQYG-VRDYFRSRIMFPIINHRGETVGFGGRIFGEGEPKYLNSPETILFSKSRVLYG 240 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L A + + N +++EGYMDV+ + Q GI VA LGTS +H +LL R + N + Sbjct: 241 LNFAGPEIRKANYSILLEGYMDVIGVMQSGIGNCVAPLGTSFNEEHAKLLKRYSENAVIL 300 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFL-PDGEDPDTLVRKEGKEAFEARMEQAM 366 +D D AG A+ R TAL + G ++ L +G DPD + K GKE FE + A+ Sbjct: 301 FDPDAAGIKASLR---TALILIQQGLFVKVATLGEEGLDPDEFINKYGKEKFENILADAV 357 Query: 367 PLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 + F + L+ Q + TP + +++ + ++S P ++ + + KL + + Sbjct: 358 DIIDFQADVLIKQHGGNLTPQNKTQIAAQLMEIVSVQPDPIVKSEWIKIVSEKLSVEE-- 415 Query: 426 QLERLMPKAAESGVSR---PVPQLKRTTMRI----LIGLLVQNPELATLVPPLENLDENK 478 L PK R P PQ+K+T + + L+ L+++P T + LDE+K Sbjct: 416 --HLLTPKKTAVNTRRNTPPAPQVKKTNIPVEEEDLVAWLLKSPAHITQA---QELDESK 470 Query: 479 LPGLGLFRELVNT 491 + E+++T Sbjct: 471 FTSRACY-EIIST 482 >UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT0_RHOS5 Length = 654 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 162/423 (38%), Positives = 235/423 (55%), Gaps = 12/423 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVK--LKK--QGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F+++L R + ++ +V L+K QG+ +F A CPFH EK+ SF V+ K FY Sbjct: 3 LPPGFLDELRNRVPLSQVVGRKVTWDLRKSNQGRGDFWAPCPFHQEKSASFHVDDRKGFY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT-LYQ 118 +CFGC A G+AI F+ + + F+E VE LA + +P P E+ R++ L + Sbjct: 63 YCFGCHAKGDAIGFVKETENVGFMEAVEILAREAGMTMP---ARDPRAAEKADRRSQLAE 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 M+ FY+ L+ A++AR YL +R LS+E RF IGFAP G + + G Sbjct: 120 AMEEAVKFYRLQLRTGAASAARDYLVRRRLSNEGQERFGIGFAPDGRQALFQALTGKGIA 179 Query: 179 RQSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPET 236 L++AG+ D G YDRFR R++FPIRD RGR I GGR + KYLN PET Sbjct: 180 ADLLVEAGLCARPEDGGAPYDRFRNRIIFPIRDARGRAISLGGRAMDPAARAKYLNGPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F KGR LY + A++ + L+V EGYMDV+AL++ G VA LGT+ T D ++L Sbjct: 240 PLFDKGRNLYNIGPAREAAGKGQPLVVAEGYMDVIALSEAGFGATVAPLGTAVTEDQLRL 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 ++R + + DGD AG AA R ++ ALP + G+ LRF LP G DPD L+R EG Sbjct: 300 MWRIHSEPVIALDGDAAGLRAALRVVDLALPLLEAGQGLRFAVLPPGLDPDDLIRSEGAA 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 A +E A P+ + L+ +P+ RA L + ++ T+R + EL Sbjct: 360 AMARVIEGAQPMVSLLWRRETEGQIFDSPERRAALDKRLRAAVQRIADPTIRRHYGDEL- 418 Query: 417 NKL 419 N+L Sbjct: 419 NRL 421 >UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ35_ANATD Length = 617 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 155/420 (36%), Positives = 234/420 (55%), Gaps = 23/420 (5%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + +L++ DIVD++ V LKK G NF A CPFH E+TPSF V+ KQ +HCFGCG GN Sbjct: 36 VEQVLSKVDIVDVVSMYVPLKKVGVNFRALCPFHQERTPSFYVSPAKQIFHCFGCGVGGN 95 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 AI F+M + L F E ++ LA ++V F + S ++ Q++ L L + ++Q Sbjct: 96 AIHFVMRIENLTFTEALKVLAGKAKIDVDFSQTQSSKDKVLAKQKEELISLHNDCLEYFQ 155 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 + L A +Y+ KRG+ E +F +GF P DN L +++ + +G+ Sbjct: 156 RQLYLRENMDAARYVLKRGIRKETAKQFGLGFCPE--DNNLYEMLSRKYSKEIIDKSGIF 213 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKGRQLYG 247 + + G++Y RF R++FPI D RVIGFGGR++ + PKY+NSP+T IF K + LYG Sbjct: 214 IERN-GKNYCRFEGRLIFPIFDTMNRVIGFGGRIIEDSQAPKYMNSPDTLIFSKSKVLYG 272 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L A+ +++ ++VEGYMDV++L Q GI+ V LGT+ T DH LL R N V+ C Sbjct: 273 LNIAK--SSKEKDFVIVEGYMDVISLHQEGIDNVVGVLGTALTQDHSFLLRRYKNEVVLC 330 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 D D+AGR+A +R+ + +G ++ M L + +DPD ++K GK+AF + + AM Sbjct: 331 LDSDQAGRNATFRSADILYQ---NGLIVKVMELENAKDPDEYIKKFGKDAFLLKKQNAMF 387 Query: 368 LSAFLFNSLMPQVDLSTPDGRAR-----LSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 F L DLS D + R + +P+ ++V RQE KL L Sbjct: 388 AIDFKVKQLSSNYDLSKSDQKFRFVREYFEKILMPITNEVE--------RQEYIRKLSQL 439 >UniRef50_A7C0U9 Truncated DNA primase n=1 Tax=Beggiatoa sp. PS RepID=A7C0U9_9GAMM Length = 384 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 163/382 (42%), Positives = 226/382 (59%), Gaps = 13/382 (3%) Query: 205 MFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLL 262 MFPI D RGRVI FGGR LG PKYLNSPET +F K R+LYG Y A + + +++ Sbjct: 1 MFPILDVRGRVIAFGGRKLGTSEHEPKYLNSPETPLFQKSRELYGWYFAGKIRS-LQKII 59 Query: 263 VVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRAL 322 VVEGYMDVVAL QYGI VA+LGT+TT H+ LFR +I +DGD+AG+ AAWRAL Sbjct: 60 VVEGYMDVVALMQYGITNVVATLGTATTHQHLTQLFRRVPEIIFGFDGDQAGQKAAWRAL 119 Query: 323 ETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDL 382 ETAL + +GRQ+RF+FLP G DPDTL+R+EG E F R+ AMPLS FLF++LM Q+D+ Sbjct: 120 ETALSLLKEGRQVRFVFLPQGSDPDTLIRQEGTENFNTRLVNAMPLSNFLFDTLMQQIDM 179 Query: 383 STPDGRARLSTLALPLISQVPGETLRIYLRQEL----GNKLGILDDSQLERLMPKAAESG 438 ++ DGRARL LA PL+ Q+P + Q+L G LG L + +PK Sbjct: 180 TSIDGRARLVELAKPLLKQLPPGPYCDLMWQKLSELTGIHLGNLATLIQKETIPKQPTIK 239 Query: 439 VSRPVPQLKRTTM-RILIGLLVQNPELATLVP-PLENLDENKLPGLGLFRELVNTCLSQP 496 S+ V LK ++ I L+ P L+ + P + L K + L EL+ P Sbjct: 240 TSQKVTNLKELSLAHKAIACLLHKPVLSQSIDYPNKKLSFFKQLDIKLLLELIEFTRHNP 299 Query: 497 GLTTGQLLEHYRGTNNAATLEKLSMWD-DIADKNI-AEQTFTDSLNHMFDSLLELRQEEL 554 L G + EH+RGT L +L++ + + D ++ ++ F D++N ++ Q + Sbjct: 300 QLNLGAICEHWRGTEYEQILNQLAVKNTHLTDNSVDIDKEFFDAINRLYKEYAT--QRLV 357 Query: 555 IARERTHGLSNEERLELWTLNQ 576 ++ L+ EE+ EL L+Q Sbjct: 358 FLTQKITNLTAEEKQELKLLSQ 379 >UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD Length = 660 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 143/359 (39%), Positives = 211/359 (58%), Gaps = 9/359 (2%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN ++ I +++ V LKK+G + CPFHNEKTPSF V+ K Y CFGCG G+ Sbjct: 7 INKIMDTARIEEVVGDFVALKKRGTSLIGNCPFHNEKTPSFNVSVTKGIYKCFGCGKGGD 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQLMDGLNTFYQ 128 A+ F+M+++K + E ++ LA +N+EV E P IE ++ R++LY + + ++ Sbjct: 67 AVHFIMDHEKYSYPEALKYLAQKYNIEVE-ETVQSPQNIEAQNARESLYIVSEYAAGYFA 125 Query: 129 QSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L A Y ++RG +++ +F +G++P WD +++ G + L G Sbjct: 126 NELWTGNDGRAIGLSYFKERGFREDILKKFQLGYSPDVWDALIQNAVGAGHKEEYLEKTG 185 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQ 244 + + ND+G+ YDRFR RVMFPI + GRVIGFGGR L D PKY+NSPE+DI+HK Sbjct: 186 LAIRNDKGKLYDRFRGRVMFPIHNFTGRVIGFGGRTLKTDKNVPKYVNSPESDIYHKSNV 245 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLY A++ + + +VEGY DV+A+ Q GI VAS GTS T + I+L+ R T NV Sbjct: 246 LYGLYHAKKAIRDQDNCYLVEGYADVLAVHQAGIENVVASSGTSLTTEQIRLIGRFTENV 305 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 YDGD AG A+ R L+ L +G ++ + PDG DPD+ + G F+ +E Sbjct: 306 TILYDGDAAGIKASLRGLDMILE---EGLNVKVVLFPDGHDPDSYMHHVGSGEFKQYIE 361 >UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHK3_SYNFM Length = 601 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 174/498 (34%), Positives = 263/498 (52%), Gaps = 30/498 (6%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DIVD++ V+L++ G CPFH EKTPSF V+ E Q Y+CFGCG+ G+ ++F+M Sbjct: 9 VDIVDVVGQVVQLRRSGNRHLGLCPFHQEKTPSFHVDAENQLYYCFGCGSGGDVLNFVMK 68 Query: 77 YDKLEFVETVEELAAMHNLEVP---FEAGSGPSQIE--RHQRQTLYQLM-DGLNTFYQQS 130 + + F E + LA +++ +P G+ P IE R +R+ LY+++ + FY Q Sbjct: 69 HRNVAFGEAIRYLAERYHIALPERDHVEGATPGAIESARKEREELYRILRSAADFFYDQL 128 Query: 131 LQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV- 189 P AR+Y+ +RGL EV+ +GFAP WD++ + + + I AG+L Sbjct: 129 HHSPEGRIAREYIARRGLPAEVVETERMGFAPQSWDSLSRHLANLGYDVEPGIGAGLLAR 188 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG---NDTPKYLNSPETDIFHKGRQLY 246 + + R YDRFR R++FPIRD+ GR++ FGGR L D PKYLNSPET ++HKGR LY Sbjct: 189 STGKDRVYDRFRNRLIFPIRDEGGRIVAFGGRSLSADLKDEPKYLNSPETAVYHKGRLLY 248 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L A++ + + ++VEGYMD++A G VA+LGT+ T +++L R ++ V+ Sbjct: 249 QLARAREACRQVRQTVLVEGYMDLLAFHARGFFRVVATLGTALTPHQVRILSRMSDEVVM 308 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 YDGD AG A R L L +RF PDG DPD +R++G E FE + Sbjct: 309 AYDGDEAGDKAMLRGLPLFLQENVAVSCVRF---PDGMDPDDFLRRDGLEGFEKLLRSRQ 365 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI-YLR---------QELG 416 L A+ ++ D S R +++ P+ V L+ YLR +E+ Sbjct: 366 ELGAYAVKRILDGWDGSA-SARLKIAAELRPIFDAVRQPLLKSEYLRLAADRLCVSEEVL 424 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPEL---ATLVPPLEN 473 N+ D ER ++ + V + + + +IL LL++ P+L A LE Sbjct: 425 NQQLRHDRRTPERPYSRSYRTPVLPGISETQTLEEKIL-RLLIRYPDLIEQADSSGALEY 483 Query: 474 LDENKLPGLGLFRELVNT 491 E KL L + LV T Sbjct: 484 FQEPKLRALAMV--LVGT 499 >UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HGK8_PEPMA Length = 598 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 142/419 (33%), Positives = 242/419 (57%), Gaps = 10/419 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRAGSNYVGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA L + E + H R+ L+++ + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLA--DKLGILVETNEVNKEKYEH-RKKLFEINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFYYKNL--LINDIPKEYIKKRNLNNNLINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G++ +++G YD+FR R+MFPI D RG VIGFGGR L KYLNSP++ + K Sbjct: 176 IEVGLINQDEKGNVYDKFRNRLMFPIIDIRGNVIGFGGRALAEARAKYLNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ +++ + ++++VEGYMDV++L YG +YA+ASLGTS T D +L+ R Sbjct: 236 KNVYGV-SNLKNSTKVGKIILVEGYMDVISLTNYGFDYAIASLGTSLTHDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA+E + + +PD DPD +++ G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIEI---FKEQDISPNIIVIPDNMDPDDYIKQYGNESFNRLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + AM + + ++ + D++ + +L L+S++ E +R ++ + L I Sbjct: 352 DNAMDSVIYEYKKILQKYDINDVKEKIQLIDDLTTLLSKLDREVIRDEYIKKFSDDLNI 410 >UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 Length = 604 Score = 271 bits (693), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 146/380 (38%), Positives = 211/380 (55%), Gaps = 18/380 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I ++ DIVD+I V+LKKQGKNF CPFH EKTPSF+V+ +KQ YHCFG Sbjct: 6 RVSEDIIEEIRKSIDIVDIISEYVQLKKQGKNFIGLCPFHGEKTPSFSVSPDKQLYHCFG 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF------EAGSGPSQIER--HQRQT 115 CGA GN F+M + L F+E+V+++A N+ +P EA S I + H Sbjct: 66 CGAGGNVFSFIMETEGLPFLESVKKIADRMNMAIPELEHVTDEATSKEDSITKIWHNAHA 125 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L F+ AR YL RG + EVI F IG+AP WD + Sbjct: 126 L-----SAKLFHHVLTSTDEGKEARDYLRNRGFTKEVIDTFQIGYAPNSWDFLASFLEKR 180 Query: 176 PENRQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 ++ G+L + + YDRFR+R++FPI + +G +I FGGR+L PKYLNSP Sbjct: 181 KFPMDEMVKCGILSVREFDQKPYDRFRDRIIFPIWNNKGDMIAFGGRILSEGNPKYLNSP 240 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 E+ IF+K LY ++A+ + N ++ EGY+DV++ + G++ VASLGT+ + Sbjct: 241 ESSIFNKSETLYYFHKARPSIRKKNEAILFEGYVDVISAWKAGVDNGVASLGTALSTTQA 300 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 ++L R T++VI CYD D AG++A ++ A G Q+R LPDG DPD ++K G Sbjct: 301 KMLRRLTDHVILCYDSDNAGQNA---TMKNAAILSEAGLQVRVAILPDGMDPDDYIQKMG 357 Query: 355 KEAFEAR-MEQAMPLSAFLF 373 + F + Q++ L F F Sbjct: 358 VDRFNKDVIGQSLTLMGFKF 377 >UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX2_9BACE Length = 596 Score = 271 bits (692), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 149/391 (38%), Positives = 214/391 (54%), Gaps = 12/391 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI++L+AR++I D++ + V L K+G N CPFHNEKTPSF+VN +KQ YHCFGC Sbjct: 3 IPEQFIDELVARSEISDVVSSYVTLNKKGSNLWGLCPFHNEKTPSFSVNQDKQIYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G I F+M + L F + V LA LEVP +G R +R + Sbjct: 63 GKGGGVISFIMEIENLSFPDAVRFLAKRAGLEVP---DTGSDDAGRKKRARALEANKDAA 119 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY L+ P R+Y+ +R +S RF +G AP WD + K ++ LID Sbjct: 120 RFYHDYLKGPGGARVREYIAQRQISPRTATRFGLGAAPDQWDALTKALTAKGYSKMELID 179 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGR 243 AG+ V G YD+FR R+M P+ D RG V GF R+L G + KYLN+PET +F KGR Sbjct: 180 AGLAVAGKNGGIYDKFRARLMLPVIDVRGDVAGFTSRILPGEEGAKYLNTPETVVFKKGR 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +Y L A ++ PN L++VEG +DV+ L Q G + VA++GT+ T +H ++L R T Sbjct: 240 LIYALNFA-KNTKRPN-LILVEGNIDVITLHQAGFDNVVATMGTALTEEHARILARYTKE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGE------DPDTLVRKEGKEA 357 ++ CYD D AG+ + R L + R L+ D E DPD +++ G A Sbjct: 298 LVLCYDNDPAGKKSTDRVLGILKNADLNVRVLQLPNAYDSEGNPLKQDPDDFIKRFGAAA 357 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGR 388 FE + + + + SL+ + L+ +GR Sbjct: 358 FEKCLNGSAGQNDYRLESLLQKHSLADEEGR 388 >UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I353_9SPHI Length = 645 Score = 271 bits (692), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 152/427 (35%), Positives = 236/427 (55%), Gaps = 11/427 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I ++ + R DI +++ V LKK+G+N ACCPFHNEK+PSF+V+ KQ Y CFGC Sbjct: 3 ISKLTTEKVKERVDIEEVVGDYVPLKKKGQNLWACCPFHNEKSPSFSVSPAKQIYKCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQLMDGL 123 G G+ I F+M+ + + F E + LA + +EV + P Q + + +R++LY + Sbjct: 63 GKAGDPIQFVMDVEGVGFTEAIRHLAGKYGIEVEEDEERTPEQDQAYSERESLYIALGFA 122 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L P S Y ++RG S+ +I +F +G+A GWD++LK + + L Sbjct: 123 RDFFVKNLLSPEGKSIGLSYFKERGFSNSIIEKFDLGYALDGWDHLLKAAKSSGFQEEIL 182 Query: 183 IDAGMLVTN--DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDI 238 + AG+++ D R YDRFR RV F I + G+ IGFG R+L D PKY+NSPET + Sbjct: 183 LKAGLILQKEGDPSRVYDRFRGRVTFAIHNIGGKPIGFGARILTKDKNQPKYINSPETAV 242 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK LYG+Y+A++ + +VEGY DV+++ GI VAS GTS T I+L+ Sbjct: 243 YHKSDVLYGMYQAKKAIRAKDNCYLVEGYTDVISMHLSGIENVVASSGTSLTEGQIKLIK 302 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ V YDGD AG A+ R ++ L G ++ + P+GEDPD+ RK G +AF Sbjct: 303 RFTDQVTVLYDGDPAGIKASLRGIDLLL---EGGLNVKAVVFPEGEDPDSYSRKVGSQAF 359 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + E + F + P +A + + I ++P +R QE + Sbjct: 360 QDYLVENSRDFIGFKIGLYQDEF-AKNPIRKAEVIREVIQSIGKIPDPIVRSVYAQEASS 418 Query: 418 KLGILDD 424 L + +D Sbjct: 419 LLEVEED 425 >UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 Length = 577 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 151/377 (40%), Positives = 214/377 (56%), Gaps = 12/377 (3%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G + F++++ R +IVD+I V LKK GKN+ CPFH EKTPSF V+ +K YHCF Sbjct: 2 GLVWEDFVDEVKQRVNIVDVISRYVNLKKTGKNYVGLCPFHQEKTPSFYVSPDKGLYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ FL+NY L F E +EELA LE+P QI L ++ Sbjct: 62 GCGAAGDVFTFLINYRNLTFREALEELAREAGLEIP----KKEEQISTEANIVL-EINKA 116 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + TFY L + YL+KRG+S E+ +F +G+AP +L+ ++ + Sbjct: 117 VATFYHIYLNSKYGAEGKLYLKKRGISSEIQEKFLLGYAPLNPTLLLRYLEKKGFSKDDI 176 Query: 183 IDAGML-VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 I A +L D+ + D F RV+FPI + RG+VIGFGGR L + PKYLNSPE++ F K Sbjct: 177 IKAKVLYFVRDEWK--DPFAGRVIFPIVNPRGKVIGFGGRSLTGEEPKYLNSPESEFFSK 234 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G+ LY LY+A++ + ++VEGYMD ++L Q GI VASLGT+ T+ +LL T Sbjct: 235 GKNLYALYQAKESIKKEGEAILVEGYMDAISLHQAGITNVVASLGTAFTSHQAKLLKSYT 294 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLP-DGEDPDTLVRKEGKEAFEA 360 N VI YD D AG A RAL +G ++ ++ LP D +DPD + K KE F Sbjct: 295 NKVILSYDQDSAGYQAGKRALSLL---EVEGIEVYWLSLPKDVKDPDEFIHKYSKEEFLK 351 Query: 361 RMEQAMPLSAFLFNSLM 377 ++++ P FL + + Sbjct: 352 FVKESKPSLDFLIENTL 368 >UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS38_DESMR Length = 576 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 161/434 (37%), Positives = 233/434 (53%), Gaps = 22/434 (5%) Query: 15 ARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFL 74 AR +I +++ V L+ G CPFH E SF V+ +K F+HCFGC A G+ IDF Sbjct: 13 ARANIAEIVGRYVTLRPVGSRLVGPCPFHQETKGSFNVHPDKGFFHCFGCQASGDVIDFF 72 Query: 75 MNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQP 134 + LEF E +E LAA +++ + ++ +R + + + +++ L + Sbjct: 73 CRINGLEFREGLERLAAEVGVDLGRARSDPRAAAKKRERDACLAMHELADRYFRHLLGRD 132 Query: 135 VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG 194 AR+YLE+RG+S E+I RF++G +P GW + G + S I AG+L G Sbjct: 133 EGRVAREYLERRGVSAEMIERFSLGVSPEGWQGLQTVLRGRGFDDDSAIIAGLLTQGKNG 192 Query: 195 RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQD 254 R++DRFR R+MFPIRD GRVI FGGRV+G PKYLNS ET I+ KG+ LYGLYEA+ Sbjct: 193 RTWDRFRGRLMFPIRDGGGRVIAFGGRVMGEGDPKYLNSAETPIYTKGQHLYGLYEARPV 252 Query: 255 NAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAG 314 A+ R L+ EGY+DV+ L Q+G A LGT+ T + + L V +DGD G Sbjct: 253 MAKTRRALLSEGYLDVITLHQFGYGEACGVLGTAMTHEQAKRLSGFAPRVDLVFDGDAPG 312 Query: 315 RDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLF- 373 R AA RA + L T G R + LPDGED D+L+ +G++ FEA +E+A F Sbjct: 313 RKAALRAAQMLL---TLGGACRVVPLPDGEDVDSLLHAQGRDGFEACLERAEDGLNFCLR 369 Query: 374 ---NSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERL 430 S P+ + A + + E LR + + LG L +++L RL Sbjct: 370 MVRESYAPR----------EIVAWAGEFLGGLADEGLRALFIPRVASGLG-LAEAELRRL 418 Query: 431 MPKAAESGVSRPVP 444 + + A+ RP P Sbjct: 419 LSRPAK----RPAP 428 >UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_LACDB Length = 612 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 158/472 (33%), Positives = 248/472 (52%), Gaps = 22/472 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRI FIN++ +IVD+I V L+K+GK++ CPFH EKTPSF+VN +KQF++ Sbjct: 1 MAGRISEDFINEVRGSVNIVDVISQYVSLEKRGKDYVGLCPFHQEKTPSFSVNPDKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN F+M +++ F E+VE +A N+ +P E P ++ L Q+ Sbjct: 61 CFGCHKGGNVYKFIMEKEEVTFPESVERVAEFANIPMPQEYQEQPVKL-----NPLMQMH 115 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L + +Y KRGL +++ F IG+AP D +L G Sbjct: 116 KEAADFYQQVLMTTKIGERGLEYARKRGLDDDLLKHFKIGYAPGKSDLLLTYLRGEGYTD 175 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 L ++G+ V + GR +DRFR+R+MFP+ D+ G ++ F GR + +D PKYLNSPET Sbjct: 176 NQLAESGLFVKSQDGRLFDRFRDRLMFPMSDESGHLVAFSGRRISDDPEEPKYLNSPETS 235 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K L+ EA++ + L++ EG+MDV++ + G+ +AS+GTS T + ++ Sbjct: 236 IFNKSDLLFHFSEAKKHARKEGHLVLFEGHMDVISAYKAGVKTGIASMGTSLTQQQVYMI 295 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T V+ YDGD G+ A RA+ L L + LPD DPD V++ G ++ Sbjct: 296 RRITKQVVINYDGDDPGQHATERAV--GLFKQAGNFDLGIVILPDKLDPDEYVKQYGPDS 353 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 ++A + A+ + F L + +++ + + A+ I+ +P + L Sbjct: 354 YQAAIRGAISTTDFFLQRLKKKYNINNEREQVAYLSEAVAEIAALPNPVEQELYVGRLAK 413 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVP 469 + G+ D A + +SR + +R +L PELA L P Sbjct: 414 ETGVSLD---------ALKVNLSRARRKQRRVDQHTSSEVL---PELAPLAP 453 >UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKU2_THEYD Length = 566 Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 147/360 (40%), Positives = 212/360 (58%), Gaps = 23/360 (6%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 R DIV+LI + LKK G+N+ + CPFH+EKTPSF VN KQ +HCFGCG G+ + F+M Sbjct: 13 RLDIVELISEYIDLKKTGQNYKSLCPFHSEKTPSFFVNPSKQIFHCFGCGKGGDIVTFVM 72 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPV 135 Y+K+ F+E + LA LE FE S I ++ LY + + +Y + L Sbjct: 73 EYEKVSFLEAISILAQKTGLE--FE--SVKKSISHISKERLYAIYESATRYYMEQLNN-- 126 Query: 136 ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGR 195 + +A+QYL KRG++ + I F IG+A P N L F LI++ LV+N Sbjct: 127 SENAKQYLIKRGINQKTIEIFQIGYA-PAEKNSLYNFLKEKNFDDILINSSRLVSN---- 181 Query: 196 SYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFHKGRQLYGLYEAQQ 253 SYD FR R++ PI D GRVIGFGGR++ ++ PKY+NSP+T IF KG L+GL+ ++Q Sbjct: 182 SYDFFRNRIIIPIHDLTGRVIGFGGRLIDSSSELPKYINSPDTPIFKKGENLFGLWHSKQ 241 Query: 254 DNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL-------LFRATNNVIC 306 E ++VVEGYMDV+ QYG VA LGT+ T + ++ L + TN ++ Sbjct: 242 HIREKGYVIVVEGYMDVILCHQYGFKNVVAPLGTALTQEQLEKTKRILNNLKKFTNKILL 301 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 +DGD AG AA R+L LP G + + LP+ EDP + ++K G +AF+ + +A+ Sbjct: 302 IFDGDEAGIHAAQRSL---LPLFYGGFIAKIVLLPEKEDPASFLQKYGDKAFKNYISKAL 358 >UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 Length = 635 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 151/421 (35%), Positives = 236/421 (56%), Gaps = 10/421 (2%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I ++ R DIV++I V LKK+G++ CPFH+EK+PSF+V+ KQ Y+CFGCGA GN Sbjct: 11 IQEIKQRIDIVEIIGDYVVLKKRGRDHLGLCPFHDEKSPSFSVSPAKQMYYCFGCGAGGN 70 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMDGLNTFY 127 A +FLM K F + +LA + +++ + +++R R+ LY++M FY Sbjct: 71 AFNFLMELGKRSFTDVALDLARRYQIQIQTLEPAQKQELQRQLSLREQLYEIMAVAAGFY 130 Query: 128 QQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID-A 185 +L QP A YL +KR LS I F +G+AP GW+ + + + ++ A Sbjct: 131 HHTLFQPQGQEALTYLDQKRCLSSATIQEFQLGYAPAGWETLYRYLVEQKRYPVAAVEQA 190 Query: 186 GMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++ G Y D+FR R+M PIRD +G+ I FG R LGND PKYLNSPET +FHK + Sbjct: 191 GLIKARQSGTGYYDQFRHRLMIPIRDVQGKTIAFGSRTLGNDEPKYLNSPETPLFHKSKT 250 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL--FRATN 302 L+GL +A+ + + ++VEGY DV+AL + GI VA+LG + + D +Q L F + Sbjct: 251 LFGLDQAKTAIQKVDEAILVEGYFDVIALHESGIKQTVAALGIALSRDQVQSLMRFSQSK 310 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVRK--EGKEAFE 359 +I +D D+AG +A RA++ P + G+ LR + LP G+D D + E KE ++ Sbjct: 311 QIIFNFDADKAGINATQRAIQEIEPLVYSGQVNLRILNLPAGKDADEFIHSSAENKEIYQ 370 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++QA + L+ Q +L P +++ + ++ ++ + R Y Q G L Sbjct: 371 TLVKQAPLWVDWQIQQLLKQKNLKDPLDFEQVARGMVDILKRLTDQNKRAYYLQLCGEIL 430 Query: 420 G 420 Sbjct: 431 S 431 >UniRef50_A5CDZ6 DNA primase n=2 Tax=Orientia tsutsugamushi RepID=A5CDZ6_ORITB Length = 591 Score = 270 bits (689), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 145/395 (36%), Positives = 225/395 (56%), Gaps = 20/395 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F ++ ++ ++ +V L K+G + CPFH+EKTPSFTVN K+FYHCFG Sbjct: 2 RSTNFFYENIRTILNVSTIVKQKVTLIKRGGEYVGICPFHSEKTPSFTVNDRKKFYHCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C AHG+ I F+ + L + E+ LA + +++P I +++ LY+ +D + Sbjct: 62 CSAHGDVIKFVADTSGLSYRESALRLAQENGIDIP---------IFSKEQEKLYEEIDII 112 Query: 124 NT---FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF---GGNPE 177 + Q ++ R YL RGLS I ++ IG+AP N+L+ F G P Sbjct: 113 HNTLELAQNFFIASLSNDIRSYLYDRGLSDLQIEKYKIGYAPG--KNLLQEFLEMRGIP- 169 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPET 236 ++ +G++ ND G+SY+ FR+R+MFPI + + IGFGGRV+ N++ PKYLNSPET Sbjct: 170 -LAFIVKSGLIAKNDNGQSYEIFRDRIMFPIINLANKTIGFGGRVINNNSQPKYLNSPET 228 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F K LYG A NR +VVEGYMD++AL GI VA+LGT+ T H+ Sbjct: 229 AVFKKNEALYGEDIATSHIYSKNRAIVVEGYMDLIALQSQGIYETVATLGTALTEKHLHK 288 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L++ + +I C+DGD+AG A RA+ LP+++ + + F+ LPDG DPD L+++ G Sbjct: 289 LWQICDEIILCFDGDQAGNRAIQRAVIKVLPHISCSQSMSFIMLPDGLDPDQLLKQHGIT 348 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARL 391 F+ ++ + +S L+ ST + +A+L Sbjct: 349 QFQKLIDTRLAVSETLWRLETNGKVFSTAESKAQL 383 >UniRef50_C7GZY8 DNA primase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZY8_9FIRM Length = 595 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 156/426 (36%), Positives = 247/426 (57%), Gaps = 16/426 (3%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 +IVD+I VKLK++G N+ CPFH EKTPSF V+ +KQF+ CFGCG G+ I F+M Y Sbjct: 14 NIVDVIGKEVKLKREGANYSGLCPFHGEKTPSFKVSEQKQFFKCFGCGESGDVIAFVMKY 73 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 L+F+E V++LA +++ + + GS I + + Y L + + +L + Sbjct: 74 YHLDFMEAVKKLADEYSIAI--DEGSFRKGISKAK---YYDLTKKVAKQFVTNLFSGSGS 128 Query: 138 SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSY 197 SA+ YL KRG+ + +A+F +GFA W N+L + + + + G ++ + Q RSY Sbjct: 129 SAKAYLLKRGVDEQTMAKFGMGFALNDWANILNSL--EDDEKVTALQLG-IIGSKQNRSY 185 Query: 198 DRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQLYGLYEAQQDNA 256 D+F RV+FPI D VIGFGGR L +D PKYLNS ++ IFHK LYGL A + Sbjct: 186 DKFVNRVIFPIIDLNRHVIGFGGRTLTDDKGPKYLNSSDSVIFHKKDHLYGLNIAADNIR 245 Query: 257 EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRD 316 + +R ++VEGYMDVV++ Q GI+ AVASLGT+ T + ++LL R T N++ YD D AG+ Sbjct: 246 KKDRAVLVEGYMDVVSMHQAGIDEAVASLGTALTEEQVKLLKRFTRNIVLSYDSDAAGKQ 305 Query: 317 AAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSL 376 A +RA++ + G R + L +DPD L+ +EG++A+ A+++ ++ F+ + + Sbjct: 306 ATFRAIQRIVK---QGLSPRVVDLGAYKDPDELITEEGRDAYLAKLDNSIAYIDFVMDYI 362 Query: 377 MPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAE 436 D S R + L E I +++ + I +DS + ++ ++A+ Sbjct: 363 EGMHDDSLQGKRDAKEDIIEFLTVADDMEIAEI--GKKISERFNIDEDSLISKV--RSAK 418 Query: 437 SGVSRP 442 S V+ P Sbjct: 419 SNVNHP 424 >UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN0_9FIRM Length = 597 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 148/393 (37%), Positives = 229/393 (58%), Gaps = 11/393 (2%) Query: 7 RVFINDLLAR----TDIVDLIDAR-VKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 R F N+ L R T+++D+I A + +KK+G + ACCPFH+EKTPSF+++ E FY+C Sbjct: 2 RKFNNEFLQRVKDSTNLIDVIRAYGIDVKKKGSRYWACCPFHHEKTPSFSISPEDGFYYC 61 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGC G++I F+ D++ F + VE LA M ++E+P + S + E LY++ + Sbjct: 62 FGCHESGDSIKFIEKMDQITFPDAVERLAEMGHVELPPDEISEEDKREAALVHKLYEVTE 121 Query: 122 -GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 N F+ L+ + Y +KR L + I F +GFAPP W+ + F Sbjct: 122 LAGNYFHNCLLRTNIGKDGLAYFKKRHLDDKTIETFKLGFAPPEWERLYCDFTKRKHISP 181 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDI 238 ++ LV + G+ YD FR R MFPI D +GR++ FGGR++ ++ KYLNSPET I Sbjct: 182 DILLQAGLVGHKNGKYYDTFRNRCMFPIMDLKGRIVAFGGRIMHSEESAAKYLNSPETVI 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K R L+ +Y+A + + ++VEGYMD ++L +GI VASLGT+ T + +LL Sbjct: 242 FNKRRLLFPIYQALPEIRRKRQAIMVEGYMDAISLHAHGIKNVVASLGTAFTVEQARLLK 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI YD D AG++A RALE A + G +LR L +G+DPD V G + + Sbjct: 302 KYADEVIFSYDMDAAGQNATRRALEIA---GSVGLKLRVALLGEGKDPDEFVNLHGGDEY 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARL 391 ++QA+P +LF +L Q D +T +G+ ++ Sbjct: 359 LEVIDQAVPALDYLFQALRTQYDGATLEGQQKI 391 >UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 Length = 608 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 143/414 (34%), Positives = 226/414 (54%), Gaps = 7/414 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 I ++ AR DI +I + +K+ G N+ CPFH EKTPSF +N KQ Y CFGCG G Sbjct: 19 IIEEIKARCDIASIISEYMNIKQSGANYKGLCPFHGEKTPSFYINTSKQIYKCFGCGEGG 78 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + I+F+M + L+F++ V+ LA +E+ ++I+ + + + FY Sbjct: 79 DVINFVMKMENLDFMDAVKILANKCGIEINTNMNE-ETRIKIEKSKKFQDIHTEAARFYL 137 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 +L +YL RGL ++I +F +GF+ W++++ +Q L++ G++ Sbjct: 138 SNLLGS-KNLGYEYLRIRGLDDKIIKKFGLGFSLDSWNSLMNTLISKGYKKQDLLECGLI 196 Query: 189 VTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 N G + YD+FR RVMFPI D RG +IGFGGRVL + PKYLNSP+T IF+K + LYG Sbjct: 197 AKNRDGTNCYDKFRNRVMFPIFDYRGNIIGFGGRVLDDSLPKYLNSPDTLIFNKKQNLYG 256 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L A++ N E +++VEGYMD+++L QYGI VA+LGT+ T L+ R + I Sbjct: 257 LNFARK-NLESKTIVLVEGYMDLISLYQYGIKNVVATLGTALTEQQGILIKRYADTAIIS 315 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG A RA++ G ++ + L D +DPD VRK G ++ M+ + Sbjct: 316 YDSDEAGIKATLRAIDILTKL---GINVKVLDLKDAKDPDEFVRKYGLSDYKKAMDVSTH 372 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + + L + ++ + R + + A +I Q+ + + L N++ I Sbjct: 373 YIKYKIDHLKKEFNIQKDEERVKFAKEASKIIKQLTSPVEIDFYTKYLSNQIDI 426 >UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD76_THET1 Length = 623 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 170/488 (34%), Positives = 251/488 (51%), Gaps = 29/488 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I ++ +R DIV++I + V+L++ G F A CPFH EKTPSF V E+Q YHCFGCG Sbjct: 6 RTIIEEIKSRIDIVEVIGSFVELRRTGSRFKALCPFHQEKTPSFIVFPERQTYHCFGCGK 65 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD-GLNT 125 G+ I FLM L F E VE+LA V FE + + + +LY++ Sbjct: 66 SGDVISFLMETQNLSFREAVEQLA--QKAGVRFEPEKPKEKSPQSEIDSLYEINKLAARL 123 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 F + A AR YL+ RGLS + +G+AP WD K + + A Sbjct: 124 FNHLLMNSKAAEHARDYLKDRGLSPATWEEWMLGYAPDSWDVTSKFLQKRGFSEDLIFKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+ V G YDRFR+R+MFPI+DK GR +GFGGR +G PKY+N+PET IF KG + Sbjct: 184 GLTVERTGGGYYDRFRDRLMFPIKDKDGRFVGFGGRAIGEGIPKYMNTPETPIFTKGEHI 243 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YG+ A+ E N ++VVEGY+DV+ QYG VA+LGT+ T H++LL + N+ Sbjct: 244 YGIDVAKSAIKESNLVVVVEGYVDVITAHQYGFRNVVATLGTAITPSHVKLLSKMAANIC 303 Query: 306 CCYDGDRAGRDAAWRALET--------ALPYMTDGRQL----------RFMFLPDGEDPD 347 D D AG+ AA R E ++P + GR + + LP GEDPD Sbjct: 304 LALDADTAGQAAALRGWEVLRDSIRRRSIPIRSKGRVISSDSKLEVLVKIATLPKGEDPD 363 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 TL+RK+ E + +E A + F + DL TP G+ + P+I + Sbjct: 364 TLIRKDPSE-WARIIEGAKTVIDHFFEIVERGYDLKTPQGKTQAIADLAPVIGDLGNPIE 422 Query: 408 RIYLRQELGNKLGILDDSQLERLMPKAAE------SGVSRPVPQLKRTTMRILIGLLVQN 461 R + L +G+ D++++ + +A + G + P+ + +++ LL++ Sbjct: 423 RAHYESRLAKLVGV-DENEIHLHVVQARKQSSRPGGGEAAPINLNSVSQEEMVLALLIRY 481 Query: 462 PELATLVP 469 P L +P Sbjct: 482 PRLLGNLP 489 >UniRef50_B6WAP6 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6WAP6_9FIRM Length = 449 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 141/399 (35%), Positives = 226/399 (56%), Gaps = 13/399 (3%) Query: 11 NDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNA 70 N++L +DIV +I V LKK G ++ CPFHNEKTPSFTV+ +KQ +HCFGCG G+ Sbjct: 10 NEILENSDIVAIIGDYVDLKKSGNSYKGLCPFHNEKTPSFTVDDKKQLFHCFGCGEGGDV 69 Query: 71 IDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQS 130 + F+M+ + L ++++++ LA+ +++ S E + LY + + ++ ++ Sbjct: 70 VSFIMHKEGLSYIDSMKYLASKAGIKID----DSKSSRENKRLNRLYDINKDIMMYFYKN 125 Query: 131 LQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVT 190 L A + YL+ RG ++ F +GFA WD++L + + G++ Sbjct: 126 LLTDKA--GQIYLKNRGFRSNIVNTFMLGFAKNSWDDLLSYVKEKDYLLDDIENLGLIKK 183 Query: 191 NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL-Y 249 + G+ YD++R R++FPI + G+VIGFGGR + + PKYLNSPE+++F K LYGL Sbjct: 184 SKNGKYYDKYRNRLIFPIINHYGKVIGFGGRSIDSTMPKYLNSPESEVFKKRYNLYGLNI 243 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 +Q N + +++VEGYMDV+ L GI+ AVASLGTS T D +LL R NV CYD Sbjct: 244 FKKQSNKD---IILVEGYMDVIGLNNQGIDQAVASLGTSLTNDQAKLLKRYAKNVFICYD 300 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 D AG A RA+E L +G + + L G DPD V+K G++AF +M++A + Sbjct: 301 EDNAGIKATDRAIEILLD---EGIKPNIISLEKGLDPDDFVKKYGRDAFIKKMDEASDVY 357 Query: 370 AFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + +N ++ S + + L + ++ + + R Sbjct: 358 NYKYNKILDIYASSKENEKFEKLNLFIEFLTSIESDLTR 396 >UniRef50_Q3AEW9 DNA primase n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AEW9_CARHZ Length = 575 Score = 268 bits (686), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 142/366 (38%), Positives = 211/366 (57%), Gaps = 14/366 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + + R D+VDL+ +LKK G+N+ CPFHNEKTPSF+V+ EK Y+CFGC G+ Sbjct: 7 VEKIRNRVDLVDLVSEYTRLKKSGRNYVGLCPFHNEKTPSFSVSPEKNLYYCFGCQKGGD 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M ++L F E V LA +N+E+P E G ++ E LY+++ FY + Sbjct: 67 IFSFIMEKERLNFKEAVFYLAKKYNIELP-ETGKAYNKNEH-----LYRMLLLAAKFYHE 120 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPG--WDNVLKRFGGNPENRQSLIDAGM 187 L+ A AR YL+ RG++ E + F +GFAP L G NP L+ G+ Sbjct: 121 ILKTEAAGKARDYLQSRGITEETVKDFMLGFAPSAKALPAFLSSKGYNP---GELVKIGI 177 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + + G +DRF R++FPI D+ GRV+GFGGR LG + PKY NSP++ IF KG+ YG Sbjct: 178 VTKSYSGNLHDRFAGRLIFPIFDREGRVVGFGGRALGEEKPKYFNSPQSVIFDKGKLFYG 237 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL--FRATNNVI 305 +A+ E + ++VEGY DV++L Q G+ A+A LGT+ T +H+ L + +I Sbjct: 238 FKQARTTIREKRQAILVEGYFDVISLHQAGVKNAIACLGTAFTEEHLNFLKNYGYIEEII 297 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D+AG AA+RALE + D ++ + L + +DPD L++ G AF +E+A Sbjct: 298 LAYDSDQAGEKAAYRALEMLVRASAD-LSIKIIRLGEFKDPDELIKNRGATAFLEEIEKA 356 Query: 366 MPLSAF 371 + F Sbjct: 357 KTPAEF 362 >UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9MA31_9BACT Length = 578 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 140/363 (38%), Positives = 213/363 (58%), Gaps = 15/363 (4%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 ++ + A D+V++I V+L K+G+N+ CPFH+EKTPSF V+ E+Q +HCFGCG G Sbjct: 5 IVDQIKAALDVVEVIGESVRLTKKGRNYTGLCPFHDEKTPSFMVSQERQSWHCFGCGKGG 64 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + F+M D L F E +E LAA +++P Q R + L+ LM+ +FY+ Sbjct: 65 DLFSFVMLKDGLSFPEALEYLAARAGIDLP-------RQGRRQVSKDLFALMEEAVSFYR 117 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 Q L+ P +AR YLE+R +S E A F +G+AP W ++ + + SL+ AG++ Sbjct: 118 QELRGPGGAAARAYLERRNVSPEAAAAFELGWAPNAWQSLSDQLKRGGASEASLLKAGLV 177 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL 248 + ++G YDRFR RV+FPIR+ RV+ GGR++ + KYLNSPE +++ K LY L Sbjct: 178 IQGNRGNCYDRFRGRVIFPIRNVPSRVVALGGRLIDGEGAKYLNSPEGELYSKKNNLYLL 237 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 A++ E R ++VEGYMD + L G VASLGT+ T + LL R + CY Sbjct: 238 DRAKESIREKGRSILVEGYMDALRLHLCGWAEGVASLGTALTEEQAALLRRFADKCYICY 297 Query: 309 DGDRAGRDAAWRALETALPYM--TDGRQLRFMFLPDGEDPDTLVRKEGK-EAFEARMEQA 365 D D AG+ A R + Y+ ++G + + LP+G+DPD L++ G E+F ++ A Sbjct: 298 DSDLAGQTATLRGM-----YLLASEGLTVYVVTLPEGKDPDELLQMPGGPESFTKALDGA 352 Query: 366 MPL 368 +PL Sbjct: 353 LPL 355 >UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0B7_9ACTO Length = 663 Score = 268 bits (685), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 162/446 (36%), Positives = 229/446 (51%), Gaps = 33/446 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M+G I + I + D+ +++ V L+ G N F CPFH+E TPSF VN + F+ Sbjct: 1 MSGLIIKADIEKVKDTVDLEEIVSNYVTLRPAGINTFKGLCPFHDENTPSFNVNTARGFW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+AI FL D L F + VE LA + + + +E G P+Q + +RQ L + Sbjct: 61 HCFGCGEGGDAISFLQKIDHLSFTDAVEHLAGKYGITLRYEEGKAPTQ-DYGKRQRLLDM 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ L P A RQ+L +RG S E F +GFAP GW+ + Sbjct: 120 HRVAEEYYQAQLHSPEALPGRQFLSERGFSAEAAKHFGVGFAPSGWNGLSNVLRAQGFTD 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q LI G+ +G YDRFR R+M+PIRD G IGFG R L ++ PKYLN+PET Sbjct: 180 QELITGGLASQGSRG-VYDRFRGRLMWPIRDLTGATIGFGARRLLPDDNGPKYLNTPETP 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK + LYGL A++ A ++++VEGY DV+A GI+ AVAS GT+ ++H++++ Sbjct: 239 IYHKSKVLYGLDLAKRSIAAKRQVVIVEGYTDVMAAHLAGIDTAVASCGTAFGSEHVKIV 298 Query: 298 FRATNN-------------------VICCYDGDRAGRDAAWRALETALPYMTD---GRQL 335 R + VI +DGD AG+ AA +A Y D Q Sbjct: 299 RRLLGDIADPSMGLQLASGESRGGEVIFTFDGDAAGQKAALKA------YGEDQNFALQT 352 Query: 336 RFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLA 395 G DP L EG EA + +PL F+ + + VDLSTP+GR A Sbjct: 353 FVAIEKRGMDPCDLRIHEGDEAIRKLVAARIPLFEFVLRTTLTAVDLSTPEGRVAGLRAA 412 Query: 396 LPLISQVPGETLRIYLRQELGNKLGI 421 P++S + L+ + L LG+ Sbjct: 413 APVVSSIRDRALQKEYVRLLSGWLGM 438 >UniRef50_Q2W753 DNA primase n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W753_MAGSA Length = 681 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 180/437 (41%), Positives = 247/437 (56%), Gaps = 20/437 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ F++++ R + ++ RV L K+G+ F CPFHNEKTPSFTVN +K F+ CFGC Sbjct: 2 IPKGFLDEIRDRVPVSAVVGRRVALAKKGREFTGLCPFHNEKTPSFTVNDDKGFFKCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHGNAI FL L FVE VEELAA LEVP S + + R +LY+ + Sbjct: 62 GAHGNAIGFLERAHGLSFVEAVEELAAEAGLEVP--KASPEERRDAAARASLYEANEAAC 119 Query: 125 TFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +++ L A + A YL +RG++ E ARF +G+AP G D + + LI Sbjct: 120 AWFEHQLTTTKAGADALFYLSRRGVAPETRARFRLGWAPNG-DALRRALDAERFPDDLLI 178 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHK 241 +AG+L D G + FR RVMFPI D+RGRVIGFG R L D PKYLNSP+T +F K Sbjct: 179 EAGLLRRRDDGTTGAFFRGRVMFPIMDRRGRVIGFGARTLSADPGVPKYLNSPDTPLFRK 238 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LYGL A+ AE +R +VVEGY+DV+A+ Q G YAVA LGT+ T ++ ++R T Sbjct: 239 GEVLYGLSHARDGAAEHSRAVVVEGYLDVIAMHQGGFPYAVAPLGTALTPGQVEEIWRLT 298 Query: 302 -----NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDG-EDPDTLVR---- 351 I DGDRAG A RA E A+P + GR LRF +P+G +DPD L+ Sbjct: 299 PDGRGEGPILMLDGDRAGAAAMRRAAEVAVPILRPGRSLRFAQMPEGAKDPDELLNPPGD 358 Query: 352 ----KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 +EG + + A PL+ L+ +L+ ++ TP+ A L A L ++ + Sbjct: 359 SVGPQEGAFRLASALGAARPLADVLWEALVAEIPPDTPERFAALEARAYGLAVRINDHAV 418 Query: 408 RIYLRQELGNKLGILDD 424 R + +LG +D Sbjct: 419 RRAYLADWRRRLGEAED 435 >UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LIA0_9BACT Length = 644 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 151/415 (36%), Positives = 230/415 (55%), Gaps = 10/415 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I R I ++ DIVD++ V L+K G N CPFHNEKTPSF V+ KQ CFGC Sbjct: 2 IDRQTIQRVMDAADIVDVVKDYVTLRKAGVNLKGLCPFHNEKTPSFVVSPTKQLCKCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GNA+ FLM ++L + E ++ LA + +EV + S Q R+++ L + Sbjct: 62 GKGGNAVHFLMEIEQLTYPEAIKTLAKKYGIEVKEKELSAEEQKSISMRESMLVLNEWAC 121 Query: 125 TFYQQSLQQPV--ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +++ L + T YL +RGL ++I +F +G++ P D + + ++ L Sbjct: 122 SYFSNLLHESKDGQTIGLSYLRQRGLRDDIIKKFHLGYSSPSRDALAQTALNKGYSKDLL 181 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFH 240 + G+ D + DR+ +R++FPI GRVIGFGGR++ + KY+NSPE+ I+ Sbjct: 182 VQTGLCFETDNHQLRDRYHDRIIFPIHSVSGRVIGFGGRIMQQNKNVGKYINSPESVIYD 241 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R+LYGLY A++ + + +VEGYMDV+A+ Q GI VAS GTS T I+LL R Sbjct: 242 KSRELYGLYFAKKAIVKEDACYLVEGYMDVIAMHQSGIENVVASSGTSLTEGQIRLLHRF 301 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+N++ YDGD AG A+ R ++ L +G ++ + LP+GEDPD+ RK E F A Sbjct: 302 TSNIVVLYDGDAAGIHASLRGIDLLLK---EGLNIKVLTLPNGEDPDSFARKHSAETFRA 358 Query: 361 RMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVP-GETLRIYLRQ 413 + QA + F + M + + P R+ + + I+ VP G T + Y R+ Sbjct: 359 YL-QAEAVDFIRFKAAMLIKETADDPIKRSESVSDIIRSIAIVPNGITRQTYARE 412 >UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Z2_NATTJ Length = 626 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 165/443 (37%), Positives = 239/443 (53%), Gaps = 21/443 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I + A D+V++ V LKKQGK + CPFH+EKTPSF ++ EKQ Y+ Sbjct: 1 MTIRIPQEIIERIQAEADLVEIASRYVNLKKQGKYYWGLCPFHSEKTPSFHISPEKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQ---IERHQRQTLY 117 CFGC A GN FL + ++L FVE ++L +E+P A S SQ E +R+ + Sbjct: 61 CFGCQAGGNVFKFLESIEQLNFVEVCQKLGEELGIELP--ADSQDSQELSQEMQEREIIK 118 Query: 118 QLMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGW---DNVLKRFG 173 + F++ L S R+YL R + + +A F IG+AP W + LK+ G Sbjct: 119 KANKYAANFFRYVLMNTETGKSGRKYLADRKIDKQTMADFFIGYAPDNWTGLSDFLKKKG 178 Query: 174 GNPENRQSLIDAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPK 229 E L+ AG L + R YDRFR RV+FPI ++RG VIGFGGR+L PK Sbjct: 179 FTEE---LLVKAG-LSNRRKYREGVYDRFRGRVIFPIYNQRGEVIGFGGRLLEESEKQPK 234 Query: 230 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 YLNSPET +F+K LYGL A + + N LV+EGY DV+ Q+G+N AVASLGTS Sbjct: 235 YLNSPETPVFNKRLSLYGLNLAFKTIRKENHALVMEGYTDVITAHQFGVNTAVASLGTSL 294 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 T + +L+ + +D D AG A R LE + G + LP+ DPD Sbjct: 295 TEEQAKLIRNNASKAYIAFDADAAGETATLRGLEIL---QSKGLDVLICQLPESYDPDEY 351 Query: 350 VRKEGKEAFEAR-MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 ++ G E F+ + ++ A+PL+ + +LST +G+ + T +P+IS++ R Sbjct: 352 LKNYGLENFQKKILDTALPLTEYQIRQAAKNKNLSTIEGKKQYVTEIIPIISKIDNAVER 411 Query: 409 IYLRQELGNKLGILDDSQLERLM 431 ++ +LGI ++ LM Sbjct: 412 EEYLNQVSEQLGISQEALNSELM 434 >UniRef50_B2J1X7 DNA primase n=6 Tax=Cyanobacteria RepID=B2J1X7_NOSP7 Length = 682 Score = 268 bits (684), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 147/371 (39%), Positives = 222/371 (59%), Gaps = 17/371 (4%) Query: 4 RIPRVF---INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 +IPR+ I ++ R DIVD++ V L+K+GK+F CPFH+EK+PSFTV+ KQ Y+ Sbjct: 2 QIPRLHPDTIEEVKLRADIVDVVSEYVVLRKRGKDFVGLCPFHDEKSPSFTVSQTKQMYY 61 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-----T 115 CFGC A GNAI F+M K F + V +LA + +VP + P Q + QRQ Sbjct: 62 CFGCQAGGNAIKFVMELGKRSFADVVLDLARRY--QVPVQTLE-PEQRQELQRQLSLREQ 118 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 LY+++ FYQ +L+Q A QYL+ R L E I +F +G+AP GW+ + + Sbjct: 119 LYEVLATSAQFYQHALRQSQGQKALQYLQSNRQLKEETIQQFGLGYAPAGWETLYRYLVE 178 Query: 175 NPENRQSLIDAGMLVT--NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLN 232 + +++ L+ + G YD FR+R+M PIRD +GRVI FGGR L ++ PKYLN Sbjct: 179 DKHYPAQILEKAGLIKPRKEGGGYYDVFRDRLMIPIRDVQGRVIAFGGRTLTDEQPKYLN 238 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET++F KG+ L+ L +A+ ++ ++ +VVEGY D +AL GIN AVASLGT+ + + Sbjct: 239 SPETELFSKGKTLFALDQAKGGISQLDQAVVVEGYFDAIALHAAGINNAVASLGTALSLE 298 Query: 293 HIQLLFRATNN--VICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTL 349 ++L+ R T + ++ +D D+AG +A RA+ G QL+ + LP+G+D D Sbjct: 299 QVRLVLRYTESKQLVLNFDADKAGTNATERAIGEIAELAYKGEVQLKILNLPNGKDADEF 358 Query: 350 VRKEGKEAFEA 360 + E ++A Sbjct: 359 LNTHNPEEYQA 369 >UniRef50_P50070 DNA primase n=3 Tax=Cystobacterineae RepID=PRIM_MYXXA Length = 606 Score = 268 bits (684), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 161/424 (37%), Positives = 232/424 (54%), Gaps = 21/424 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++L R D+V LI V LKK G+ + ACCPFH EKTPSF V EK+FY C GC Sbjct: 5 IPEHKIQEVLERVDLVGLISRHVDLKKAGREWKACCPFHQEKTPSFYVVPEKRFYFCHGC 64 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+A+ F+ Y F++ V +LA L V EA PS ER Q + + D Sbjct: 65 RASGDAVSFVQRYLGKTFLDAVRDLA--RELGVDLEAEQDPSMRERQQ---IKEATDQAA 119 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++ L QQ SAR Y+ RG+S E F +G+AP W ++ +RF + ++ Sbjct: 120 EHFRAMLWQQDEGRSARAYIASRGVSDETAMAFGLGWAPLEWASLTERF-----QKLGML 174 Query: 184 D----AGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETD 237 + AG+++ + G YD FR RVM PIR GR I FGGR++G D PKYLNS E+ Sbjct: 175 EWAAKAGLVLKRNSGDGYYDFFRSRVMVPIRAPEGRPIAFGGRLIGADEGPKYLNSRESR 234 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +++K L+G+ +++ + + ++VEGY D + L Q G+ +AVA T+ TA H+Q+L Sbjct: 235 LYNKSETLFGMDQSRDEIRKRKAAVLVEGYFDALGLHQVGVRHAVALCSTNLTAGHMQVL 294 Query: 298 FRA-TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 RA +I DGD AG A R + P + G R LP G+DPDT R+EG+E Sbjct: 295 KRAEARELILLLDGDSAGLAAVER---LSGPLLAAGATARVALLPQGDDPDTFARREGQE 351 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 E +E A PL++ LF SL+P+ ++ + + P++ QVP +R L + Sbjct: 352 GVERLLEGAHPLTSHLFASLLPEGKAASFEEKMAALERLKPVVGQVPVGLVRATLFSAVA 411 Query: 417 NKLG 420 G Sbjct: 412 EHFG 415 >UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4F6_DESRD Length = 573 Score = 267 bits (683), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 145/368 (39%), Positives = 205/368 (55%), Gaps = 6/368 (1%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I + AR +IVD++ V L++ G + CPFH E PS +V+ EK F++CFGC A G+ Sbjct: 9 IEAIKARLNIVDIVRRYVDLRQVGDRWAGVCPFHQETKPSLSVHPEKGFFYCFGCQASGD 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ-RQTLYQLMDGLNTFYQ 128 DF + LEF + +EELA V P +R Q R+ ++ +F+Q Sbjct: 69 LFDFYCMINGLEFRQALEELA--REAGVTLNDRPDPQAAQRQQERRACLEMHSLAQSFFQ 126 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 + L+ A AR+YLE RG+ + F +G+AP W + + + Q + AG+L Sbjct: 127 RQLESAEARQAREYLEARGVDETMQDYFGLGYAPEQWQALCGHLQQSGYSPQKGVTAGLL 186 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL 248 N +GR YDRFR RV FPI D G+VI FGGRV+G PKYLNS ++ I+ KG LYGL Sbjct: 187 SQNKKGRIYDRFRGRVTFPIHDLGGKVIAFGGRVIGEGEPKYLNSSDSPIYKKGAHLYGL 246 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 Y+A+Q + +L+ EGY DV+AL +YG A LGT+ T + ++ L V Y Sbjct: 247 YQARQAVTQSKEVLLTEGYADVIALVRYGFTNACGVLGTALTEEQVRRLAGLARRVTLVY 306 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPL 368 DGDRAGR AA R+ E L G Q R + LPDGED D+L++ +G F+ + +A Sbjct: 307 DGDRAGRQAASRSAEMLL---RQGVQCRVVSLPDGEDVDSLLQGQGAAGFQRYVREAEEG 363 Query: 369 SAFLFNSL 376 +F L Sbjct: 364 LSFCLRVL 371 >UniRef50_B1C761 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C761_9FIRM Length = 607 Score = 267 bits (683), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 153/388 (39%), Positives = 222/388 (57%), Gaps = 32/388 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G + FI L+ DIV +I+ V L++ G + A CPFH EKTPSF V E YH Sbjct: 1 MKGYFKKDFIRRLVDDADIVGIINQYVPLQRSGTRYKARCPFHTEKTPSFVVTPEMGRYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQ-----IERHQRQT 115 CFGC A+G+ +DFLM +KL+F VE LA M + V +E ++ I +++Q Sbjct: 61 CFGCNANGDVLDFLMEMNKLDFSGAVELLADMEGVNVQYEENGNYTRRSENAISYNEKQE 120 Query: 116 LYQLM-DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL----- 169 LY + D N +Y+ ++ V +YL RGL E I +F +G++ +DN+ Sbjct: 121 LYNCIKDSANYYYKNLMKSGVPL---KYLLDRGLKKETIKKFGLGYSINEFDNLYNYLVK 177 Query: 170 -KRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--D 226 K++ N +LI AG++ TND+ YD FR+R+MFPI+D G++I FGGR+ N + Sbjct: 178 EKKYSVN-----TLIKAGLVRTNDKRGVYDYFRDRIMFPIQDVNGKLIAFGGRIFKNVKN 232 Query: 227 TPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLG 286 PKYLNSPET +F K LY L A+++ +E L++VEGYMDV++L GIN AVA+LG Sbjct: 233 APKYLNSPETLVFKKNSTLYNLNNARKELSEK-PLILVEGYMDVISLVNNGINNAVATLG 291 Query: 287 TSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRA---LETALPYMTDGRQLRFMFLPDG 343 T+ +H +L+ R T NV+ YD D AG +A +A LE+A Y + + LP G Sbjct: 292 TAFNINHAKLINRYTKNVVIMYDSDNAGLNATIKAGEILESANIYP------KVVRLPKG 345 Query: 344 EDPDTLVRKEGKEAFEARMEQAMPLSAF 371 +DPD+ + E F +E + F Sbjct: 346 DDPDSYILNNSIEKFNNLVENGVDSIEF 373 >UniRef50_A4XHW3 DNA primase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHW3_CALS8 Length = 616 Score = 267 bits (683), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 152/424 (35%), Positives = 233/424 (54%), Gaps = 30/424 (7%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + +L + DIVD++ + + LK+ G NF A CPFH+EKTPSF V+ KQ +HCFGCG GN Sbjct: 33 VEQVLNKVDIVDIVSSYIPLKRVGVNFRALCPFHSEKTPSFYVSPAKQIFHCFGCGVGGN 92 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 I F+M + L F E ++ LA +++ F ++ S + Q++ L L +++ Sbjct: 93 VIHFVMRMENLTFTEALKVLAEKAKIDIDFSQSQSAKDRALAKQKEELINLHKDCFEYFR 152 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPG---WDNVLKRFGGNPENRQSLIDA 185 + L A +Y+ KR ++ + RF +GF P +D + +++ + +ID Sbjct: 153 EQLYLRKNIEAVKYIIKRRIAKDTAKRFGLGFCPEKNDLYDRLSQKYS------KEIIDL 206 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGR 243 + G++Y RF R++FPI D RVI FGGR++ + + PKY+NSP+T IF K R Sbjct: 207 SGIFLERNGKNYCRFEGRLIFPIFDTMNRVIAFGGRIISDASAAPKYMNSPDTLIFSKSR 266 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+Q ++ N +VVEGYMDV+AL Q GI+ AV LGT+ T DH LL R N Sbjct: 267 ILYGLNIAKQ--SKENEFVVVEGYMDVIALHQEGIDNAVGVLGTALTQDHSFLLRRYKNE 324 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ C D D AG+ AA R+ + +G +R M L +DPD +++ GK+AF + + Sbjct: 325 VVLCLDSDEAGKKAAIRSADIL---YQNGLMVRVMELEGAKDPDEYIKRFGKDAFLLKKQ 381 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRAR-----LSTLALPLISQVPGETLRIYLRQELGNK 418 +M + + L Q DL+ D + R + +P+ ++V RQE K Sbjct: 382 NSMFVIDYKVKELKNQYDLTKSDQKFRFVREYFEKILIPISNEVE--------RQEYIKK 433 Query: 419 LGIL 422 L L Sbjct: 434 LSDL 437 >UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA Length = 620 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 137/369 (37%), Positives = 206/369 (55%), Gaps = 6/369 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I+D+ DI D++ V+L+K GKN CPFH+EKTPSF+V+ KQ +H Sbjct: 1 MAGMIPEDVIDDVRTSVDIADVVGRYVQLRKAGKNLFGVCPFHDEKTPSFSVSESKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHN--LEVPFEAGSGPSQIERHQRQTLYQ 118 CF CG GN FLM+ + L F E+V +A N L+ + + S Q + Sbjct: 61 CFSCGRGGNVFKFLMDLENLSFPESVRRVAEFGNIPLDQSYFKSTKKSSYTSEQSALIDL 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 F L + A QYL+KRG++ + I F IGFA P + +L F + + Sbjct: 121 YEKASELFSHILLNTKLGEDALQYLKKRGMTEDDIKNFDIGFAAPEDNLLLSFFKEHKID 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPET 236 + + ++G+ + ++ DRF R++FPI+D G+++ F GR L D PKYLNSPET Sbjct: 181 QHLMAESGLFIESENQTLRDRFFNRIIFPIKDTNGKIVAFSGRSLVKDKNHPKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+KG+ LY +A+ + + +++ EG+MDV+A + + +A++GTS T DHI Sbjct: 241 SIFNKGKVLYNFSQARSEIIQQKTVILYEGFMDVIAAHRAAVKNGIATMGTSLTEDHINA 300 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 + R + VI C+DGD G+ A RA+E L + Q+ +F+PD DPD V + G Sbjct: 301 IKRVADRVIICFDGDAPGQKAIARAIE--LLRQSSDLQISVVFIPDNLDPDEYVNQRGTA 358 Query: 357 AFEARMEQA 365 AF+ M+Q Sbjct: 359 AFQNLMQQT 367 >UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4_KOCRD Length = 668 Score = 267 bits (682), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 161/447 (36%), Positives = 243/447 (54%), Gaps = 14/447 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I+++ ARTDI ++++ V LK G ++ CPFH+E++PSF V + Y Sbjct: 1 MAGLIKREDIDEVRARTDIREVVEQYVTLKPAGIGSYKGLCPFHDERSPSFHVRPQMGTY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I FLM D F ETVE LAA E+ +E G P++ E +RQ L Sbjct: 61 HCFGCDESGDVIAFLMEMDHTPFTETVERLAARIGYELHYEQGGAPNREEVGRRQRLLDA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+Q++L A +A+++L +RG + + +G+AP GW ++L Sbjct: 121 HKVAAEFFQRNLYTRQAAAAQKFLGERGFDQDAARTYGVGYAPQGWSHLLNHLRNQGFTE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETD 237 Q L GM ++G YDRFR R+++PIR G VIGFG R L D PKYLN+PET Sbjct: 181 QELKLTGMFSEGNRG-LYDRFRGRLIWPIRAVAGEVIGFGARKLYEDDQGPKYLNTPETQ 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + LYG+ A++ A+ +++VVEGY DV+A G+ AVA+ GT+ +HI+++ Sbjct: 240 LYKKSQVLYGIDLAKRPIAKTKQVVVVEGYTDVMACHLAGVATAVATCGTAFGPEHIKIV 299 Query: 298 FR------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R A V+ +DGD AG+ AA RA + ++ Q P+G DP L Sbjct: 300 RRFLSDDSAGGEVVFTFDGDAAGQKAALRAFQEDQRFVA---QTYVAVEPNGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G A +E PL F + + + D+++ +GR R P+++Q+ +LR Sbjct: 357 ARGDVAVRDLVETRTPLFEFALRATIKEYDVNSLEGRLRAMRACAPIVAQIRDSSLRPAY 416 Query: 412 RQELGNKLGILDDSQLERLMPKAAESG 438 +EL LGI D ++ R + AA+S Sbjct: 417 ARELSGWLGIETD-EVMRAVSAAAKSA 442 >UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RX1_SYMTH Length = 623 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 173/504 (34%), Positives = 256/504 (50%), Gaps = 43/504 (8%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 R + F +++ AR DIV++I A VKL+++G + CPFH+EKTPSF V + QFY+CF Sbjct: 2 ARFDQAFKDEVRARNDIVEVISAYVKLERRGNRYVGLCPFHSEKTPSFHVVPDGQFYYCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC A G+ FLM + L F E + +LA + +P E + + +R+ +Y +D Sbjct: 62 GCKASGDVFTFLMEREHLTFYEALVQLAQRARIPLPQEERTPEEERAYRERRDMYAALDL 121 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY L P YL RGL+ E I RF +G+AP L R + Q L Sbjct: 122 AARFYHHQLFTPAGKPGLDYLLGRGLTEETIRRFRLGWAP--GRGALFRALRDRFPPQIL 179 Query: 183 IDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 AG++V G + D F ERVMFPI D GRVIGFGGR+LG + KY N+ ET +F K Sbjct: 180 QKAGLIVPRRDGPGFMDVFFERVMFPIADLSGRVIGFGGRILGGEGAKYKNTAETPLFVK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L+GL +A++ N+ ++VEGYMDV+ Q GI VA LGT+ T + ++++ + Sbjct: 240 RHVLFGLDQAKEAMRARNQAILVEGYMDVLMPHQAGIQNVVAPLGTALTDEQVRIIRQQA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 VI +D D AG+ A R L+ G +R + LPDG+DPD +R G AF R Sbjct: 300 QQVIVAFDMDTAGQLATLRGLQK---LYDSGCDVRVLQLPDGKDPDEFIRTHGAPAFVER 356 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG- 420 +EQA+PL F + +P TP+ A+ +++ V E +R ++ ++L Sbjct: 357 IEQALPLIEFRLSLALPATRRPTPEEMAKAVESVAQVLADVRNEVVREAYVDQVADRLAG 416 Query: 421 ----------ILDDSQLERLMPKA------------------AESGVSRPVP-------- 444 + D Q+ RL+ + A G +RP P Sbjct: 417 DNPLAKPDLKLAIDRQMNRLLRRGFQHNLPDSRNNRRGPGAPASPGPTRPRPDQAPVTQA 476 Query: 445 QLKRTTMRILIGLLVQNPELATLV 468 + R R+L+ LL+++P L V Sbjct: 477 EGARRAERVLLYLLLEHPGLLRTV 500 >UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QT03_9SPHI Length = 703 Score = 266 bits (680), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 159/448 (35%), Positives = 245/448 (54%), Gaps = 22/448 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + + DI+++I+ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFG Sbjct: 2 RIPEETVERIRQSADILEVINDFVSLKKRGSNYIACCPFHNEKTPSFNVNPTRQIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+++ F+M+ + + + E + LA + +E+ + + + +++R++L +++ Sbjct: 62 CGKAGDSVRFIMDIENIGYGEALRYLAKKYGIEIEEQEQTPEDLLRQNERESLLIVLNFA 121 Query: 124 NTFYQQSLQ--QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 TF+Q++L+ + Y +RG ++ I F +G+ WD +LK +R Sbjct: 122 KTFFQETLKTTDEGKSIGLSYFRERGFTNPTIDAFELGYTLDQWDALLKEGIRRGYSRDL 181 Query: 182 LIDAGMLVTND-----QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-------TPK 229 L AG+++ + + +DRFR RVMFPI + GRVI FG R+L D PK Sbjct: 182 LEKAGLILVKEGSAGGDSKVFDRFRGRVMFPIHNVSGRVIAFGARILKTDKNQPGGAAPK 241 Query: 230 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 YLNSPET ++HK + LYG+Y+A+Q + + + EGY DV++L Q GI VAS GTS Sbjct: 242 YLNSPETSVYHKSQVLYGIYQAKQAIRQEDVCYLTEGYTDVISLHQAGIKNVVASSGTSL 301 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 T + I+L+ R T NV YDGD AG AA R L+ L LR + LPDGEDPD+ Sbjct: 302 TTEQIRLISRFTPNVTILYDGDAAGIKAALRGLDMVLEEGL---NLRLLLLPDGEDPDSY 358 Query: 350 VRKEGKEAFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 V K G +AF+ + E + F + + + P RA + I+++P R Sbjct: 359 VHKIGADAFKTYIREHSQDFIDFKASRWLTEAG-DNPLKRAEGISDVCVSITKIPDALKR 417 Query: 409 IYLRQELGNKLGILDD---SQLERLMPK 433 L Q + + + S++ RL+ K Sbjct: 418 QTLSQRVAQVFHVSEQSVISEINRLLRK 445 >UniRef50_C7HUH2 DNA primase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUH2_9FIRM Length = 557 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 144/403 (35%), Positives = 227/403 (56%), Gaps = 21/403 (5%) Query: 11 NDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNA 70 N++L +DIV +I V LKK G ++ CPFHNEKTPSFTV+ KQ +HCFGCG G+ Sbjct: 10 NEILENSDIVAIIGDYVDLKKSGNSYKGLCPFHNEKTPSFTVDDRKQLFHCFGCGEGGDV 69 Query: 71 IDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQS 130 + F+M+ + L ++++++ LA +++ S ++I Y + + ++ ++ Sbjct: 70 VSFIMHKEGLSYIDSMKYLAKKAGIKLDDTKSSKENKI----LNRYYDINKDIMMYFYKN 125 Query: 131 LQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA----G 186 L A + YL+ RG ++ F +GFA WD++L +N+ L+D G Sbjct: 126 LLTDKA--GQIYLKNRGFRSNIVNTFMLGFAKNSWDDLLNY----VKNKDYLLDDIENLG 179 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 ++ + G+ YD++R R++FPI + G+VIGFGGR + + PKYLNSPE+ +F K LY Sbjct: 180 LIKKSQNGKYYDKYRNRLIFPIINHYGKVIGFGGRSIDSTMPKYLNSPESQVFKKRYNLY 239 Query: 247 GL-YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 GL +Q N + +++VEGYMDV+ L GI+ AVASLGTS T D +LL R NV Sbjct: 240 GLNIFKKQSNKD---IILVEGYMDVIGLNNQGIDQAVASLGTSLTNDQAKLLKRYAKNVY 296 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 CYD D AG A RA+E L +G + + L G DPD V+K G++AF +M++A Sbjct: 297 ICYDEDNAGIKATDRAIEILLD---EGIKPNIISLEKGLDPDDFVKKYGRDAFIKKMDEA 353 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + + +N ++ S + + L + +S + + R Sbjct: 354 SDVYNYKYNKILDLYADSKDNEKFEKLNLFIEFLSSIKSDLTR 396 >UniRef50_C0QRZ4 DNA primase n=1 Tax=Persephonella marina EX-H1 RepID=C0QRZ4_PERMH Length = 548 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 161/483 (33%), Positives = 262/483 (54%), Gaps = 23/483 (4%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I ++ ++ D+I + L+K G N+ A CPFH+EKTPSF V+ +K + CFGCG G Sbjct: 8 IEEVRRTANVYDVISEYINLEKAGSNYKALCPFHSEKTPSFIVSPQKNIFKCFGCGKSGT 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 A+ FLM+Y+ + F E V +LA +N+ V + +G + H + L+ + + + FY+ Sbjct: 68 ALSFLMDYEGISFSEAVIKLAQKYNIPVKY---TGTEKNYEHLK-GLFSVTEKIAKFYKD 123 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L+ + R+YL+KR + F +G++P ++ + + L + G++ Sbjct: 124 QLKN--SKDVREYLKKREVLSSTADHFDLGYSPENPQLIIDFCKSEGIDLEKLKEVGVVT 181 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGRQLYGL 248 D DRFR R++FPIRD RGRV+ FGGR L + PKY+NSPET+I+ KG+ LYG Sbjct: 182 ERDDESIVDRFRGRLIFPIRDHRGRVVAFGGRALRESHQPKYINSPETEIYSKGKVLYGF 241 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 +E++ E +++VEGY+D+++L Q G+ VA+LGT+ T H LL + N + + Sbjct: 242 FESKDYLREKKWVVIVEGYLDLISLYQTGVKNVVATLGTAFTEYHGDLLKKFVNKAVLMF 301 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPL 368 D D+AG+ A RA + L D + + + DG+DPD L K+G +A E +++A Sbjct: 302 DSDKAGKKAVIRASKILLSKNID---VYYALIEDGKDPDDLA-KQGYKAVENTLKKAENF 357 Query: 369 SAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLE 428 FL N + + +L + + L L ++S +P +T + L ++L + G L +S LE Sbjct: 358 LDFLLNRIKDEKELKK---KGEIIDLYLDMVSVIPEKTKQGLLIKKLSEETG-LQESYLE 413 Query: 429 -RLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE-NKLPGLGLFR 486 + A E+ + L +T IL L+ + EL L D +K+ G G F Sbjct: 414 LKKSSTATETEEVKFTDYLSKTEKLILKTLITKKDEL------LSRFDRFDKIEGSGNFE 467 Query: 487 ELV 489 LV Sbjct: 468 ILV 470 >UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7A3 Length = 739 Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust. Identities = 156/399 (39%), Positives = 221/399 (55%), Gaps = 18/399 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I++L +RT I +++ V LK G + CPFH+EKTPSFTV + Y Sbjct: 1 MAGLIKREDIDELRSRTRIDEVVGEFVTLKTAGIGSLKGLCPFHDEKTPSFTVRPQVGMY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ FL ++L FVETVE LA + + +E G GP + + +RQ L ++ Sbjct: 61 HCFGCGESGDVFSFLQKVEQLSFVETVEALAGKIGMHLRYEDGKGPDREQASRRQRLLEM 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNV---LKRFGGNP 176 + F+ Q L+ R++LE RG F +GFAP WD++ LKR G Sbjct: 121 HEVAQRFFTQCLESEQGQIGREFLEGRGFPLSSSKEFGLGFAPKSWDSLTSQLKRAGFTE 180 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSP 234 E I AG L + YDRFR RV++PI+D R IGFG R L +D PKYLN+P Sbjct: 181 EE----ILAGGLASEGGRGIYDRFRGRVVWPIKDMTSRTIGFGARRLYDDDKGPKYLNTP 236 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET ++HK + LYGL A++D A+ R+++VEGY DV+A G+ AVA+ GT+ +H+ Sbjct: 237 ETALYHKNQVLYGLDLAKKDIAKTKRVVIVEGYTDVMAAHLAGVTQAVATCGTAFGPEHV 296 Query: 295 QLLFR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 +++ R T VI +DGD AG+ AA RA E + Q PDG DP L Sbjct: 297 KIVRRLLGDDPTGQVIFTFDGDAAGQKAALRAFEFESEFTA---QTFVAVEPDGLDPCDL 353 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGR 388 ++G A ++ PL F+ + + + DL + +GR Sbjct: 354 RMQKGDGALRELIDGRKPLFEFVITTAISRYDLDSVEGR 392 >UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSW9_DESAD Length = 579 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 151/448 (33%), Positives = 238/448 (53%), Gaps = 14/448 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R I + R DIVD++ V+LK + CPFHNEKT SF+VNGE+ F++CFGC Sbjct: 1 MDRAAIEAIKERLDIVDIVRRYVELKPVSGRWMGLCPFHNEKTASFSVNGEEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ DF + + +EF + +E+LAA +E+ + +R+ + + Sbjct: 61 QASGDIFDFYSHINGVEFKDALEQLAAEAGVELTPGKVDPQAAKRSSERKIFMDMHEHAA 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ + L+ P AR+Y+E RG+ VI F +G + W + K + + Sbjct: 121 KYFSRMLKLPEGREARKYIEGRGMDTSVIESFGLGCSTDDWQGLEKYLVSKGYTAEQGVK 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N +GR+YDRFR R++FPI + GRVI FGGR++ N PKYLNS +T I+ KG Sbjct: 181 AGLLSQNAKGRTYDRFRARLIFPITNLSGRVIAFGGRIITNGEPKYLNSSDTPIYKKGEH 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ A R L+ EGYMDV++L Q+G + LGT+ T D ++ L + + Sbjct: 241 LYGLSTARNSIARTKRALLTEGYMDVISLHQFGYTNSCGVLGTALTPDQVKRLSGFCSKI 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 +DGD AG AA R+ E L T G + LPDGED D++++ G E F+ +++ Sbjct: 301 DLVFDGDAAGLKAALRSTEMIL---TQGVSCGVVVLPDGEDVDSILQSRGAEGFQVFLDK 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F +L +P + A + ++ +LR + ++ + LG+ + Sbjct: 358 ARDGLEFSLETLQKGY---SP---REVMDWAQGFLKRMTSASLRAFYLPKVASGLGVA-E 410 Query: 425 SQLERLMPKAAESGVSRPVPQLKRTTMR 452 ++L + A ++ PVPQ + T R Sbjct: 411 AELRSVFSGA----LNAPVPQQQNTVQR 434 >UniRef50_A6Q1G7 DNA primase DnaG n=7 Tax=Epsilonproteobacteria RepID=A6Q1G7_NITSB Length = 552 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 145/381 (38%), Positives = 212/381 (55%), Gaps = 14/381 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I L DIVD+I ++LKK G N+ A CPFH E TPSF V+ KQ +HCFGCGA G+ Sbjct: 16 IEQLKNIVDIVDVIGNYIELKKAGSNYKALCPFHQEDTPSFVVSPSKQIFHCFGCGAGGD 75 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 AI FLM Y+KL + E +E+LA M+N + GS S L++ ++ +N Y++ Sbjct: 76 AIKFLMEYEKLSYPEAIEKLAGMYNFSLQ-RIGSKESS------SNLFKALESINRLYKK 128 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L A YL++RG+++ I +F +G+AP G + ++ Q I G+L Sbjct: 129 ELFS--KKKALDYLKQRGVANNSIEKFELGYAPEG-NTQIQYLKKEFIPLQDAIQTGIL- 184 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLY 249 + D GR Y R ER+ FPI G ++GFGGR + N KYLNSPET +FHK + LYG + Sbjct: 185 SQDSGRVYARLVERITFPIYSPNGALVGFGGRTITNHPAKYLNSPETKLFHKSKILYGYH 244 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 A+Q+ + L+V EGY+DVV L Q G AVA+LGT+ T H+ LL + VI YD Sbjct: 245 LAKQEIYKKKELIVCEGYLDVVMLHQAGFQNAVATLGTALTPSHLPLLRKGEPRVILAYD 304 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 GDRAG +AA +A + +G + F +DP +V+K + + + +P Sbjct: 305 GDRAGIEAALKASKMLTKADIEGGVVIFT---QDQDPADMVKKAQLQELQRLFAKPIPFV 361 Query: 370 AFLFNSLMPQVDLSTPDGRAR 390 F+ + + D+ P + + Sbjct: 362 EFVLEKTVQKYDIKNPREKEK 382 >UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9DELT Length = 590 Score = 265 bits (677), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 155/442 (35%), Positives = 235/442 (53%), Gaps = 24/442 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R + + AR I D++ V LK + CPFH E PS +VN ++ F++CFGC Sbjct: 1 MDRSAVEAVKARISIADIVRRYVDLKPVSGRWMGACPFHQETKPSMSVNDDEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLE---VPFEAGSGPSQIERHQR-QTLYQLM 120 A G+ DF + LEF E +E LAA +E VP + P ER R L+ + Sbjct: 61 QASGDVFDFYARINGLEFREALEHLAAEAGVELGNVPHD----PHAAERKARIAMLFDMH 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D N ++Q++L AR+YL KRG++ +VI +F +G++P W + G + Sbjct: 117 DEANAWFQRNLTMEAGAVAREYLTKRGMTPDVIRKFGLGYSPDDWRGLESHLKGKGRTPE 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 ++AG+L N++G YDRFR R++FPI++ GRVI FGGR++ + PKYLNS +T I+ Sbjct: 177 LGVEAGLLSQNEKGNIYDRFRGRLIFPIQNLSGRVIAFGGRIITDGEPKYLNSSDTPIYK 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG LYGL A+ R L+ EGYMDV++L Q+G A LGT+ T + ++ L Sbjct: 237 KGDHLYGLNLARSTMTRSKRALLTEGYMDVISLHQFGYTDACGVLGTALTPEQVKRLAGF 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + V +DGD AGR A AL+++ + G R + +P GED D+L++ +G E FEA Sbjct: 297 CSRVDLVFDGDGAGRKA---ALKSSRMILLQGVACRVVLMPQGEDVDSLLQTKGAEGFEA 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 MEQA F +L + + A ++ +P +LR + + LG Sbjct: 354 CMEQAPDGLDFCMTTLRNEF------APREIMAWAKGFLTDLPDASLRAFYLPRIAGGLG 407 Query: 421 ILDDSQLERLMPKAAESGVSRP 442 L ++ R ++GVS P Sbjct: 408 -LSEADFRR------DTGVSGP 422 >UniRef50_C6XRH9 DNA primase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRH9_HIRBI Length = 645 Score = 265 bits (677), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 152/437 (34%), Positives = 231/437 (52%), Gaps = 24/437 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R FI++L R I + +VKL + GKNF PF +E TPSF V+ +K+ Y CF Sbjct: 2 RFSEAFIDELKDRLPISGYVGRKVKLVRSGKNFKGLSPFKDENTPSFYVDDDKRSYRCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G+ I F+ + L F E VE+L + +E+P E + Q+ + R++L++LM+ Sbjct: 62 TQNSGDIISFVQETEGLSFQEAVEKLVQLAGMEMPTETKAEKKQVTK--RKSLFELMEAA 119 Query: 124 NTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY++ L++PV AR+YL K RGL R IG+AP GW + + L Sbjct: 120 VAFYEEQLREPVGEQAREYLSKSRGLGEGAWRRHRIGYAPEGWQTLHDHLIKMGATAKEL 179 Query: 183 IDAGML--VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-------NDTPKYLNS 233 ++ G++ N YD FR R++FPI D GR I GGR L PKY+NS Sbjct: 180 LEIGLVRPSKNSSKPPYDAFRHRIIFPILDPTGRPIALGGRALEPGHVLKEKGIPKYVNS 239 Query: 234 PETDIFHKGRQLYGLYEAQQ---------DNAEP--NRLLVVEGYMDVVALAQYGINYAV 282 ET +FHK +Y A+ +A+P L+V EGYMDV+A+A++G + AV Sbjct: 240 SETPLFHKSSVIYNYGRARDAIYKLSRNASSADPFARGLIVTEGYMDVIAMAEHGFSTAV 299 Query: 283 ASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD 342 A +GT+ T + +++L+R I C+DGD AG+ AA RA++ ALP + G+ + LP Sbjct: 300 APMGTALTEEQLKMLWRVGPEPIMCFDGDEAGQKAAMRAVDLALPMLEPGKSVYVTILPQ 359 Query: 343 GEDPDTLVRKEGKE-AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 G DPD L++ +G E + A PL L++ + + L TP+ RA +S Sbjct: 360 GMDPDDLLKTDGGEYGLRDLLRNARPLVELLWDRELNKEKLDTPERRAGFEARLDEAVSA 419 Query: 402 VPGETLRIYLRQELGNK 418 + E +R +EL ++ Sbjct: 420 IANEQVRRAYERELKDR 436 >UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F851_9ACTN Length = 663 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 159/445 (35%), Positives = 238/445 (53%), Gaps = 16/445 (3%) Query: 11 NDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 N + TD+V L+ V+L+ +G + CCPFH EKTPSF V Q +HCFGCG G+ Sbjct: 8 NKVRDATDLVALVSETVELRPRGNTDLWGCCPFHGEKTPSFHVIPATQVWHCFGCGEGGD 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 A ++M + L F E++ LA +E+ + S +R++ L ++ + +FY Sbjct: 68 AFTYVMKREGLSFPESIRYLADRAGIELEEDHSFKRSGTKRNR---LVEVCEETCSFYHT 124 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L + R Y ++R L E ++ +GFAP G +++ G Q +IDA + Sbjct: 125 LLMRGKDARGRDYCKERELDAETCRKYRLGFAP-GHGMLVRHLGSKGFTPQEMIDANVAF 183 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQLYG 247 + G DRF +RVMFPI D++GR I FGGR L + KYLNS ET IFHKG+ LYG Sbjct: 184 RSRGGGLVDRFFDRVMFPIFDEQGRCIAFGGRALDKEKTNAKYLNSSETPIFHKGKNLYG 243 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 A+ N +VVEGY+ ++ + GI VA LGT+ T +H++ L R T ++ Sbjct: 244 FNWAKDHIVNNNEAIVVEGYISAMSCWKAGIENIVAVLGTALTENHVKTLMRFTKKIVYM 303 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 +DGD AG+ AA RA++ D LR + LP+G+DPD VR G EA ++ ++P Sbjct: 304 FDGDAAGQKAARRAVQF---IEKDDLDLRCVILPNGQDPDDFVRANGGEALRELLDNSIP 360 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 L F+F L + D+STP GRA+ AL LI + + ++ ++LG+ D+ Sbjct: 361 LMDFVFGKLEEESDISTPGGRAKAMRSALELIYPLRASYMIDSYYMQIADRLGLDVDT-- 418 Query: 428 ERLMPKAAESGVSRPVPQLKRTTMR 452 +A+ V R V Q + T R Sbjct: 419 ----IRASAGKVFREVQQREETARR 439 >UniRef50_C5B5M4 DNA primase n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B5M4_METEA Length = 515 Score = 265 bits (676), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 152/418 (36%), Positives = 235/418 (56%), Gaps = 13/418 (3%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 ++++ +R + + RV L++ G+ + PF E+TPSF VN K+FYHCF G HG Sbjct: 7 ILDEIRSRVPVSQIAGRRVALRRSGREWKGLSPFQQERTPSFFVNDHKRFYHCFSSGRHG 66 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + FLM + + F E VE LA+ +++P AG R +R + + + F++ Sbjct: 67 DVFRFLMETEGMTFPEAVEALASEAGIDLP--AGPIEGFAGRSRRHGILEALLAAAAFFR 124 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNV---LKRFGGNPENRQSLIDA 185 ++L+ V AR L++R + RF +G+AP GWD + LK G + E L +A Sbjct: 125 EALEGEVGEDARGLLDRRAVGTSARDRFGMGYAPLGWDRLRTHLKDLGFDDE---ILAEA 181 Query: 186 GMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKGR 243 G++ T +G ++DRFR+R+M PI D GR++GFG R L D +PKYLNSPET +F KG Sbjct: 182 GLVGTGARGLAAFDRFRDRIMLPIHDASGRLVGFGARALVEDGSPKYLNSPETRVFRKGE 241 Query: 244 QLYGLYEAQ-QDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 L+ + A+ D A+P L+VVEGY+DVVAL V+ +GT+ T + + L +R ++ Sbjct: 242 LLFNFHRARTADPAQP--LVVVEGYLDVVALESSQWQRTVSPMGTALTGEQLHLAWRLSD 299 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + DGD AGR A RA++ ALP + GR LR LPDG+DPD +VR + + Sbjct: 300 EPVLLLDGDGAGRRATDRAIDAALPELLPGRSLRIGRLPDGQDPDGMVRAGRLDEIAEAV 359 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 E A+PL L+ D STP+ RA + + + + ++ +R + E+ +LG Sbjct: 360 EGALPLVDALWLRETGGADASTPERRAAIESRLVAAVDRIRDPLVRRHYADEIARRLG 417 >UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9FIRM Length = 638 Score = 264 bits (675), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 150/389 (38%), Positives = 219/389 (56%), Gaps = 11/389 (2%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 P I ++ + DIVD+I VKL+K+G N+ CPFHNEK+PSF+V+ KQ Y+CFGCG Sbjct: 4 PDEVIEEVRMKNDIVDVISGYVKLQKKGANYFGLCPFHNEKSPSFSVSPGKQMYYCFGCG 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD-GLN 124 A GN + F+M Y+ F E + LA + +P S ++ + R L ++ N Sbjct: 64 AGGNVLTFVMEYENYTFQEALAHLADRAGVSLPKMEYSKEAREQAEHRARLLEVNKLAAN 123 Query: 125 TFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY Q L+QP +YL ++RGL + I F +G++ D++ + G L Sbjct: 124 YFYYQ-LKQPQGKLGYEYLHDRRGLLDDTIVHFGLGYSNKTSDDLYRFLKGKGYEDSFLK 182 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 D G++ ++G D+F RVMFPI D RVIGFGGRV+G+ PKYLNSPET +F K R Sbjct: 183 DTGLVTLEERG-GRDKFWNRVMFPIMDVNNRVIGFGGRVMGDGEPKYLNSPETKLFDKSR 241 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ + LL+ EGY+DV++L Q G AVASLGT+ T+ H +L R T+ Sbjct: 242 NLYGLNYAR--TSREGYLLICEGYLDVISLHQAGFTNAVASLGTAFTSQHANVLKRYTDQ 299 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 VI YD D AG AA R A+P + + G ++ + + +DPD ++ G +AF R+ Sbjct: 300 VILTYDSDGAGIKAALR----AIPILKEVGMSIKVLNMKPHKDPDEFIKNMGADAFRQRI 355 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARL 391 ++A F + L + P+ + R Sbjct: 356 KEAKNSFLFEVDVLRQGYQMDDPEQKTRF 384 >UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHB3_RHOM4 Length = 619 Score = 264 bits (675), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 162/415 (39%), Positives = 229/415 (55%), Gaps = 23/415 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I + DIV+++ V L+++G N+ CPFH EKTPSF+VN + CFG Sbjct: 2 RIPEETIEAIRTAVDIVEVVGEYVSLRRRGANWFGLCPFHEEKTPSFSVNPHLGIFKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP--FEAGSGPSQIERHQRQTLYQLMD 121 CG G+ F+ + + FVE V LA + +P E P R LY + Sbjct: 62 CGRGGDVFAFIQQIEHVSFVEAVRMLAERAGIPLPDGEEEADDP-------RPALYHALR 114 Query: 122 GLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLK---RFGGNPE 177 FY + L Q A AR YL++RG+ E + RF +G+AP WD +LK G PE Sbjct: 115 FAARFYFEQLTQSEAGQVARAYLKQRGIHPEAVRRFGLGYAPNAWDALLKAATEAGIRPE 174 Query: 178 NRQSLIDAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSP 234 L AG+++ ++G YDRFR R+MFPI GRV+GFGGR+L D PKY+N+P Sbjct: 175 ---VLEQAGLVLPRKERGGYYDRFRHRLMFPIFSHTGRVVGFGGRLLEPDPEQPKYINTP 231 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET ++HKGR LYGLY+A+Q ++VEGY DV+AL Q GI + VA+ GT+ T D Sbjct: 232 ETPVYHKGRILYGLYQARQALRTQEEAILVEGYTDVIALHQAGIEHVVATSGTALTPDQA 291 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +LL R V+ +D D AG+ AA R++E ++ G + + LP GEDPD+ VR +G Sbjct: 292 RLLARYVRRVVLLFDADAAGQQAALRSIEL---FLERGLNVYVVSLPPGEDPDSFVRAKG 348 Query: 355 KEAFEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 AF+ + Q F + Q L TP+G A ++ + I+++P LR Sbjct: 349 ARAFQEYLRQRRRDFVTFHYELARRQGRLDTPEGEAEVARTIVSAIARLPDPLLR 403 >UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID=B9KY77_THERP Length = 616 Score = 264 bits (674), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 183/531 (34%), Positives = 269/531 (50%), Gaps = 61/531 (11%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 DIVDLI ++L+K GKNF A CPFH EKTPSF V E Q ++CFGCGA G+AI FLM Sbjct: 14 DIVDLIGGYIQLRKAGKNFKALCPFHQEKTPSFYVFPETQSFYCFGCGASGDAISFLMRI 73 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIER---HQRQTLYQLMDGLNTFYQQSLQ-Q 133 ++L+F + +E LA + + S P ER QR+ L +L ++ L Sbjct: 74 EQLDFRDALERLAERAGITL-----SPPRPEERAEDEQRRRLAELNRLAAAWFAHVLWGT 128 Query: 134 PVATSARQYLEKRGLSHEVIARFAIGFAP---PGWDNVLKRFGGNPENRQSLIDAGMLVT 190 +AR YLE+RG+ RF +G+AP L + G PE L+ AG++V Sbjct: 129 SFGEAARSYLERRGIDRPTAERFGLGYAPDAPSALARYLSQHGAGPEE---LVTAGLVVR 185 Query: 191 NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYE 250 D G DRFR R++FPIRD+ G ++GFGGR LG PKYLNSP+T +F KG LY + Sbjct: 186 RDDGSLVDRFRNRLIFPIRDRHGTILGFGGRTLGEAQPKYLNSPQTPLFDKGSVLYAIDL 245 Query: 251 AQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDG 310 A++ + +VVEGY+D + Q+G + VASLGT+ T + L R ++ D Sbjct: 246 AEESIRQQRTAIVVEGYLDAITAHQFGYSNTVASLGTALTERQGRHLRRLAERILLALDA 305 Query: 311 DRAGRDAAWRALETALPYMTDG-------RQL-RF----------MFLPDGEDPDTLVRK 352 D AGR A R LE + +G RQL RF + LP+G DPD L+R+ Sbjct: 306 DVAGRQATLRGLELLRHALAEGERAVVDPRQLIRFERTLDVELAVVVLPEGLDPDDLIRQ 365 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 + EA + A+PL + + L+ + + P L PL+ ++ G+ +++ L Sbjct: 366 DRTRWDEA-LAHAVPLVDYYLDVLLGEQPPANPRAATALLQRIAPLLLEL-GDLVQVDLY 423 Query: 413 QELGNKLGILDDSQLERLM------------PKAAESGVSRPVPQLKRTTMRILIGLLVQ 460 L + + RL+ PK + + RP+ +T + +GLL++ Sbjct: 424 TRSVAARLRLPEETVRRLLASLRRQPTREPSPKTTAAAILRPL-----STEQQFVGLLLR 478 Query: 461 NPELATLVP---PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR 508 PE A + LE++ + + +RELV+ L+ L L E R Sbjct: 479 YPEAAAHLVGEIDLESITDAR------YRELVSLLLAGQPLDDAALAEDLR 523 >UniRef50_B6BSC8 DNA primase n=3 Tax=Candidatus Pelagibacter RepID=B6BSC8_9RICK Length = 591 Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 143/425 (33%), Positives = 239/425 (56%), Gaps = 12/425 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + P+ +++++ R + ++ V LKK+GK + PF NEKTPSFTVN EK+FYHCF Sbjct: 2 KYPKEYLDEIKTRLKVSTVVSKSVALKKRGKEYVGLSPFKNEKTPSFTVNDEKEFYHCFA 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 HGN DF+M L+F E V+ LA + ++ P+ + E+ ++ L + Sbjct: 62 TSEHGNIFDFVMKIQNLKFGEAVKHLAQLAGMQ-PYMFSKQDEEREKKWKEYLSIYEQYV 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAP--PGWDNVLKRFGGNPENRQS 181 N ++ + L+ ++AR YL+ R L + + +F IG+ P + LK N + Q+ Sbjct: 121 NFYHNELLKNETYSNARDYLKNRFLGKDEVKKFKIGYIEKNPTFFEKLK----NEFSEQT 176 Query: 182 LIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETDI 238 L+++G+ +++ ++Y +RFR R++FPI + G+ + GGR++ N KY+NSPET+ Sbjct: 177 LVESGLFYLDEKKKTYVERFRGRLIFPINNISGQPVALGGRIIENLEYLAKYINSPETNF 236 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG LY L A++ + + + + +VEGYMDVV L++ GI VA+LGTS T I L Sbjct: 237 FKKGSNLYNLDLARKFSNKLDHIYLVEGYMDVVGLSKNGIENVVANLGTSLTDKQILTLN 296 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + +++I C+DGD +G AA RA E ++ + +Q+ F+FLPD EDPD+ V K GK F Sbjct: 297 QFFDDIIICFDGDESGYKAAVRAAENSIKELKPEKQISFLFLPDKEDPDSYVNKNGKNYF 356 Query: 359 -EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 E + + + F+F+ Q D + P A + + + + ++ Y+ + Sbjct: 357 IEFTNQSKLSIHQFIFSHYKKQTD-NNPSSMAIFEKKLRGIANTIKDDFIKKYVLEYFLE 415 Query: 418 KLGIL 422 K+ L Sbjct: 416 KIAEL 420 >UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWR8_9FIRM Length = 581 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 148/365 (40%), Positives = 213/365 (58%), Gaps = 11/365 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + ++ RTDIVDLI V LKK+G ++ CPFH EKTPSF+V+ KQ ++CFGCG G+ Sbjct: 8 VEEIRQRTDIVDLIGQYVHLKKKGSSYFGLCPFHGEKTPSFSVSPGKQIFYCFGCGKAGD 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 +I F+M Y+ L FVE +E+LA N+ +P E SG ++ E R L ++ F+ + Sbjct: 68 SIRFMMEYENLSFVEAIEQLAERANVTLP-EKSSGVNKGEEDLRYKLLEINKNAALFFVK 126 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L+ P QYL KR LS E I F +G+A D + + L ++G+ Sbjct: 127 QLRSPKGKLGLQYLAKRALSGESITHFGLGYAVQEKDALYQHCKALGYEDAILQESGLFT 186 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLY 249 + G D+F RV+FPI D RVIGFGGRV+G+ PKYLNSPET +F K R L+ L Sbjct: 187 FKENGVR-DKFFNRVIFPIMDLHHRVIGFGGRVMGDGEPKYLNSPETKLFDKSRNLFALN 245 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 A++ + + L++ EGYMDV+++ Q G AVA+LGT+ T LL R T+ V+ C+D Sbjct: 246 FARR--SRESYLILCEGYMDVISMHQAGCIEAVAALGTAFTEQQAALLKRFTSTVLLCFD 303 Query: 310 GDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPL 368 D AGR A R A+P + + Q + + L +DPD ++ EGK+A R+ A Sbjct: 304 SDNAGRKACKR----AIPILREKEIQAKVISLKPYKDPDEFLKAEGKDALMERIHNAK-- 357 Query: 369 SAFLF 373 +AFL+ Sbjct: 358 NAFLW 362 >UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9XFW4_9BACT Length = 605 Score = 263 bits (672), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 145/397 (36%), Positives = 227/397 (57%), Gaps = 18/397 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G + + + +DIVD+I + + LK+ G NF A CPFH EK+PSF VN KQ +H Sbjct: 1 MTGFFSQATREQVRSASDIVDVIGSYLPLKRAGANFVALCPFHKEKSPSFNVNPHKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQL 119 CFGC G+ F+ Y+ + F + V+ LA ++P E + P+Q + RH + L Q+ Sbjct: 61 CFGCHKGGDVFTFVKEYENIPFPDAVKRLA--ERAKIPLEMDNNPAQQQSRHLKDVLLQI 118 Query: 120 MDGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVL---KRFGGN 175 + + +Q +L A AR YL +RG++ E I F +G+AP W++ + + G + Sbjct: 119 HEQITQRWQSALANEAAGQIARDYLVQRGVTEEAIKLFRLGYAPDVWEDTVNWSRSKGFD 178 Query: 176 PENRQSLIDAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYL 231 P +++ L+ +G YDRFR R++FPI D++GRVIGF GRVL D T KY+ Sbjct: 179 P----VVMEQSGLILRKEGSDHYYDRFRGRLIFPICDEQGRVIGFSGRVLSGDQKTAKYV 234 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPET IF KG+ +GL ++++ E +V EG +D++A G+ VA GT+ TA Sbjct: 235 NSPETPIFTKGKVFFGLDKSKRALLEAQSAIVCEGQLDLIACYMAGVQNMVAPQGTALTA 294 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 DH ++L R V+ C+D D AG++AA R+L++ L G +R +P DPD+ ++ Sbjct: 295 DHARILKRYAEEVVLCFDSDNAGQNAAVRSLDSLL---ASGLAIRVAVVPAPHDPDSFIK 351 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGR 388 + G EAF+ +++A + N L D+++ GR Sbjct: 352 EYGGEAFKELVKKASGFFDYYLNRLCETNDVASDKGR 388 >UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 RepID=B0S1K2_FINM2 Length = 595 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 138/423 (32%), Positives = 242/423 (57%), Gaps = 10/423 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRSGSNYIGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA L + E + H R+ L+ + + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLA--DKLGILVETNEVNKEKYEH-RKKLFAINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFFYKNL--LINDVPKEYIKKRDLTNSMINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G+ +++G +D+FR R+MFPI D RG +IGFGGR L + KY+NSP++ + K Sbjct: 176 IEVGLANQDERGNIFDKFRNRLMFPIIDIRGNIIGFGGRTLADAKAKYMNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ +++ + ++++VEGYMDV++L YG ++A+ASLGTS T D +L+ R Sbjct: 236 KNVYGV-SNLKNSTKVGKIILVEGYMDVISLTNYGFDFAIASLGTSLTYDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA++ + + +PD DPD ++K G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIQV---FKEIDISPNIIVIPDNLDPDDYIKKYGNESFNKLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AM + + ++ + D++ + +L L+S++ +R ++ L I Sbjct: 352 DNAMDSIIYEYKKILKKYDINDVKEKIQLIDDLTTLLSKLDRAVIRDEYIKKFAEDLQID 411 Query: 423 DDS 425 D+S Sbjct: 412 DNS 414 >UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE26_9CLOT Length = 617 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 154/484 (31%), Positives = 253/484 (52%), Gaps = 31/484 (6%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G I FI L DI +I + V +K++G+N A CPFH EKTPSF + + Q ++CF Sbjct: 32 GMISESFITQLKLACDIESIISSYVPMKREGRNKKALCPFHLEKTPSFVIYEDTQSFYCF 91 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ I F+M + L+++E V LAA + VP E G + R + ++ Sbjct: 92 GCGAGGDVITFIMRIENLDYIEAVRFLAARVGMTVP-EDGQDDRKARLKAR--ILEMNRE 148 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ +L+ P + +Y R L+ + + + +G+AP W ++L+ + + Sbjct: 149 AARFFHANLKSPAGQAGLRYFAGRRLTKQTVVTYGLGYAPDDWHSLLRHLSSKGYSYEEQ 208 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 A ++V + +G YD+FR RVMFPI D RG VIGFGGRVL + PKYLNS +T +F K Sbjct: 209 EAAALVVKSQKGNYYDQFRNRVMFPIIDLRGNVIGFGGRVLDDSKPKYLNSADTPVFKKS 268 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ L A+Q A+ L++ EGYMDV+A+ Q G++ VA+LGT+ T++ +L+ + + Sbjct: 269 RNLFSLNFAKQ--AKERTLVLAEGYMDVIAMYQAGVHNVVATLGTALTSEQARLISQYAD 326 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +VI YD D G+ A +A + + G + R + L D +DPD ++K G F+ + Sbjct: 327 DVIIAYDSDEPGQIATAKA---SRLFEEAGVEARVLVLKDAKDPDEYIKKFGAGRFQVLL 383 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 EQ+ +++ F L + DL PD + + A +I+ + R L + G+ Sbjct: 384 EQSENVTSSKFKRLKEKYDLELPDEKIKYLGEACGVIAGLYDSLERDVYASTLAAECGLT 443 Query: 423 DDSQLERLMP--------------KAAESGVSRPVPQLKRTTMRI---------LIGLLV 459 + L+++ + +SG + P +L + + +IG L Sbjct: 444 KEVVLDKVAAIRKSRFGRQKKREWRDIQSGRAAPPDRLNPESAKYPKEAAAEEGIIGFLC 503 Query: 460 QNPE 463 +NP+ Sbjct: 504 KNPD 507 >UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM01_AKKM8 Length = 599 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 142/368 (38%), Positives = 210/368 (57%), Gaps = 10/368 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 GRI I +L TDIVD++ + + LK+ G + ACCPFHNEKTPSF V+ +Q + CF Sbjct: 2 GRIDEDSIRRVLEATDIVDVVGSYLPLKRAGSRWKACCPFHNEKTPSFIVDQSRQNFKCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+AI F+M + L F +TV LA + + E + R R L Sbjct: 62 GCGEGGSAITFVMKMENLGFADTVRRLAEKAGISIVEEVYDAAEERRRKARTALLVAHKK 121 Query: 123 LNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL--KRFGGNPENR 179 F+ + L P A AR YL RG ++ R+ +G+AP L R G P+ Sbjct: 122 AAGFFHRLLLCSPKAAEARAYLNSRGYGADMAKRWQVGWAPDSSREFLAWARREGIPD-- 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q LID+G+ ++G Y RFR+R+MFPI + G + F GR+L + KY+NSPET Sbjct: 180 QVLIDSGLANRGERGDLYARFRDRLMFPINNVYGECVAFSGRILRPQENVGKYVNSPETA 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF KG ++ L +A+ + + L+ EG +DV+A + GI++AVA LGT+ T +H ++L Sbjct: 240 IFKKGDVVFALDKARGPMGKSGKALLCEGQIDVIACHEAGISFAVAPLGTAFTPEHARIL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R + ++ C+D D+AG AA RA P+ G+ + + LP G+DPD+ +++EGKEA Sbjct: 300 SRYASRIVLCFDADKAGMAAADRAFRELAPF---GKDIYLVNLPAGDDPDSFMKREGKEA 356 Query: 358 FEARMEQA 365 F +E+A Sbjct: 357 FSGMVERA 364 >UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E613_GEOLS Length = 588 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 166/474 (35%), Positives = 248/474 (52%), Gaps = 34/474 (7%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + ++ R I ++I V LK+ G NF CPFH EKTPSF VN ++ +HCFGCGA G+ Sbjct: 7 VREVAERLSIAEIIGEYVSLKRSGSNFLGLCPFHGEKTPSFNVNPAREIFHCFGCGAGGD 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEV---PFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 F+M + + F E + +LAA + + P + ER Q++ + L Sbjct: 67 IFSFVMKIEGISFPEALRKLAARAGVAIEDRPLTDAEKQLKTERDQQRAIMLLT---AQH 123 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLK--RFGGNP-ENRQSL 182 Y+++L +QP AR YL++R + E A + +G+AP D +++ R G P E + L Sbjct: 124 YRETLTRQPEGAVARSYLQEREVDPETAAAYGLGYAPERRDTLIQLLRAKGLPLEQAEQL 183 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 G++ D+G YD R++FPIRDK+G+ IGF GRVL N PKY+NSPE+ ++ K Sbjct: 184 ---GIIRRGDRG-WYDLLHHRLIFPIRDKQGQPIGFAGRVLDNSLPKYINSPESPLYRKS 239 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 L+G+ A +D + ++VEGY D +AL + GI A+A+ GT+ T HI LL + Sbjct: 240 SVLFGVDLALRDIRQSGTAIIVEGYFDHLALYRAGIRNALATCGTALTDGHISLLKKHAQ 299 Query: 303 NVICCYDGDRAGRDAAWRA----LETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 V +DGD AGR A RA LE ALP + LP GEDPD+L++K G EAF Sbjct: 300 RVCLLFDGDNAGRKATVRAMELCLEQALPVYV-------INLPQGEDPDSLLQKHGVEAF 352 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R+ A P + L+ + + D R RL +P ++ R ++E+ Sbjct: 353 NQRVAAAKPAFEQFLHWLLAKTPADSIDQRVRLMDEIIPRFQRIKDPVERDLYQKEICRL 412 Query: 419 LGILDDSQLERL-------MPKAAESGVSRPVPQL--KRTTMRILIGLLVQNPE 463 LG+ + RL P A ++PV Q + +T ++GLL PE Sbjct: 413 LGVDLQAFRRRLAGQRDQQQPVAQRQTATKPVTQTIARDSTQETMLGLLAAYPE 466 >UniRef50_A6QCI7 DNA primase DnaG n=3 Tax=Epsilonproteobacteria RepID=A6QCI7_SULNB Length = 550 Score = 262 bits (669), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 149/379 (39%), Positives = 215/379 (56%), Gaps = 13/379 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I L DIVD+I ++LKK G N+ A CPFH EKTPSF V+ KQ YHCFGCG G+ Sbjct: 7 IESLKNSIDIVDVIGNFIELKKAGANYKANCPFHGEKTPSFVVSPSKQIYHCFGCGVGGD 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 +I F+M +KL + E +E+LA+M+N + + GS S +R +++ + T+Y + Sbjct: 67 SIKFVMELEKLSYPEAIEKLASMYNFSLNYTKGS--SDYSDAKR-----VLETIQTWYVK 119 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 +L+ +A+QYL RG++ I RF IG+ P G ++V+ ++AG+L Sbjct: 120 NLEN--NPTAKQYLLDRGIAQSSIQRFGIGYVPDG-NSVINFLNSALLPLPQAVEAGILA 176 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLY 249 + GR Y R ER+ FPI G +GFGGR + N KY+NSP+T +F+K R LYG Sbjct: 177 QGEGGRYYARLVERITFPIYSTSGGAVGFGGRTITNHPAKYINSPQTKLFNKSRLLYGYD 236 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 A++ + +L+V EGY+DVV Q G AVA+LGT+ TA+H+ LL + VI YD Sbjct: 237 LAKESIYKNKKLIVCEGYLDVVMFHQAGFTEAVATLGTALTAEHLPLLRKGDPKVILAYD 296 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 GD+AG AA +A + DG + F PDG+DP L+ K EA + +A PL Sbjct: 297 GDKAGVAAALKAAQMLSVSGFDGGVVLF---PDGQDPADLIAKGQSEAVAKLLREAKPLI 353 Query: 370 AFLFNSLMPQVDLSTPDGR 388 F+ + DL P + Sbjct: 354 PFVLEKTIYAYDLHDPRAK 372 >UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWU3_SYNWW Length = 593 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 163/495 (32%), Positives = 259/495 (52%), Gaps = 24/495 (4%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + ++L R DIV+++ V L ++G + CPFH EKT SF V +K ++CFGC A G+ Sbjct: 9 LEEILNRLDIVEIVSESVNLSRKGNRYWGLCPFHQEKTASFCVTPDKNMFYCFGCHAGGD 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M D LEF E +E LA +E+ ++ SG + R+ + ++ FYQQ Sbjct: 69 IFSFVMKRDGLEFREAMEYLAGKAGIEL-VKSRSGK---QTDHRKPVIEVNQAAVEFYQQ 124 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L + AR+YL +RGL I ++ +G+AP GW + + +++ L +G++ Sbjct: 125 VLAGKLGQEAREYLRRRGLEAATIKKYQLGYAPDGWTRLEEHLLKKGYSQEYLKLSGLIK 184 Query: 190 -TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGL 248 + ++ YD R R++FPI G ++G GGRVL + PKYLN+PET++F K + LYGL Sbjct: 185 RSENRNNFYDLLRRRLVFPIMHYNGDIVGLGGRVLDDSLPKYLNTPETELFSKRKVLYGL 244 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 ++A+ + N+ ++VEGYMD + L Q GIN VA++GT+ T++ +LL R V+ Y Sbjct: 245 FQARDSIRQANKAIIVEGYMDCIKLQQLGINNVVATMGTALTSEQARLLQRYCEKVLLLY 304 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPL 368 DGD AG+ RALE +G + + LP GEDPD + K GKE F R Q L Sbjct: 305 DGDEAGQRETIRALEIL---GNEGLKASVVSLPMGEDPDDYIEKYGKEEF-LRYIQNNKL 360 Query: 369 S--AFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQ 426 S F N + + + + R I Q+ E + Y + L KL I ++ Sbjct: 361 SNIEFKINRYLSREKELNLESQIRTINYLRKDIGQLNSELEKDYYIKILARKLKIEENIV 420 Query: 427 LERLMPKAAE-SGVSRPVPQLKRTTMRI--------LIGLLVQNPELATLVPP---LENL 474 L + + SG+ R ++ R ++ ++ + + PEL + LE L Sbjct: 421 YRELKKRERDISGIKRNKSKIIRDNIKYVNYGINEKILAAMFKKPELFEYIKNRIGLEFL 480 Query: 475 DENKLPGL-GLFREL 488 +E L L G++ +L Sbjct: 481 EERDLRALAGIYEKL 495 >UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH Length = 596 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 143/375 (38%), Positives = 205/375 (54%), Gaps = 7/375 (1%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 DIVD+I + VKL+K+G N CPFHNEK+PSF+V+G KQ YHCFGCG GN FLM Y Sbjct: 16 DIVDVIGSYVKLQKRGANHMGLCPFHNEKSPSFSVSGSKQMYHCFGCGVGGNVFTFLMEY 75 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 + FVE ++ L +++P S ++ + + +L +Y L+ Sbjct: 76 ENYTFVEALKVLGDRAGVKLPELEYSEEAKKAADLKTRVLELYKEAGKYYYYQLRSKQGE 135 Query: 138 SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSY 197 A YL RGLS E+I +F +G++ D++ + L +G+ + +Y Sbjct: 136 EALAYLRNRGLSEEIITKFGLGYSTKYSDDLYQYMKKAGYEDSLLRQSGLFTMEESKGAY 195 Query: 198 DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAE 257 D+F RVMFPI D +VI FGGRV+G+ PKYLNSPET +F K R L+GL A+ + Sbjct: 196 DKFWNRVMFPIMDGNNKVIAFGGRVMGDGVPKYLNSPETIVFDKSRNLFGLNFAR--TSR 253 Query: 258 PNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDA 317 + L+ EGYMDV+AL Q G AVASLGT+ T +LL R T YD D AG A Sbjct: 254 KDYFLICEGYMDVIALHQAGFQNAVASLGTAFTPQQARLLSRYTKEAYLTYDSDGAGVAA 313 Query: 318 AWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSL 376 A R A+P + + G + + + +DPD ++ G E ++ R++QAM F + L Sbjct: 314 AIR----AIPILKEAGLSAKVIDMKPYKDPDEFIKALGAEEYQNRIDQAMNSFFFEISVL 369 Query: 377 MPQVDLSTPDGRARL 391 DL P+ + + Sbjct: 370 ERDYDLGDPEQKTKF 384 >UniRef50_UPI0001C31A92 DNA primase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31A92 Length = 641 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 148/416 (35%), Positives = 233/416 (56%), Gaps = 16/416 (3%) Query: 17 TDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 D++ L+ + +L++ G N + CPFH E+T SF V E++ YHCFGC G+ DF+M Sbjct: 16 VDMISLVSGKTELRRAGVNSYFGRCPFHEERTGSFHVRPEEKHYHCFGCQESGDPFDFVM 75 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPV 135 N + L+F +E LA + + E ++ R +R L+ L+D +Y + L + Sbjct: 76 NTEGLDFRGALETLAERFGVTLEVEDEDPLAKARRERRDRLHDLLDRAAAYYARYLWESA 135 Query: 136 -ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL--KRFGGNPENRQSLIDAGMLVTND 192 A AR YL +RGL+ E + + +G+AP WD +L R G E + L+ G+ + Sbjct: 136 EAAGARDYLARRGLTEETLRTYRVGYAPSAWDKMLLGSRQAGFSE--EELLATGLAQRSK 193 Query: 193 QGRS--YDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGRQLYGLY 249 Q R YDRFRER+MFP+ + RG+V+GFG R + N PKYLN+ E ++FHKG QL+G+ Sbjct: 194 QRRGSLYDRFRERIMFPLANARGKVVGFGARAMRDNQPPKYLNTSEGEVFHKGSQLFGID 253 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 A++ A +++ EGY DV+AL Q G+ AV +GTS T + + L R ++ D Sbjct: 254 IARRAAARAGSIVLAEGYTDVLALHQAGVQNAVGVMGTSLTEEQARELERTARTLLLALD 313 Query: 310 GDRAGRDAAWRALETALPYMTDGR--QLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 DRAG++A RA A GR +LR + LP+G+DP L+++EG +A R+ +++P Sbjct: 314 ADRAGQEAMVRASRIAA-----GRRLELRVVGLPEGKDPADLIQEEGPDAVRERVARSVP 368 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 AF + ++ DL + + R P++ VP LR L + + +L + D Sbjct: 369 FVAFHVDKILTGSDLGDAEAKDRAIAELRPVLGPVPPSVLREELIRRIAGRLDLSD 424 >UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_CHLPD Length = 636 Score = 261 bits (668), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 166/427 (38%), Positives = 227/427 (53%), Gaps = 20/427 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ I+D+ TDIVDLI VKL G+N+ A PF EKTPSF V+ +KQ + CF Sbjct: 7 IPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFST 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GN F+M +K+ F E VE LA +++ Q E ++ QT L Sbjct: 67 GKGGNVYTFVMEMEKISFPEAVELLAKRTGIDISRFTKQQKIQNEENESQT-GTLRWAAR 125 Query: 125 TFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 TF+ +L+ P YL E RGLS +I +F IG+AP WDN++ +L Sbjct: 126 TFHN-TLESPKGVQGLSYLTEARGLSRAIIQQFGIGYAPDQWDNLINEAKQASIPLANLT 184 Query: 184 DAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFH 240 + G+ + ++G YD FR RV+FPI G+V GFGGR L +D TPKYLNSPE +F Sbjct: 185 ELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPENPLFE 244 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYGL+ A+ + L+VEGYMDV+AL Q GI AVAS GTS T ++L R Sbjct: 245 KSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQRY 304 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 TN V+ YD D AG+ + ++T +T+G + LP G+DPD+ V++ GKE F Sbjct: 305 TNRVLFVYDADPAGKKSMMAGIDT---LVTEGITPFVLELPSGDDPDSFVQRAGKEEFLR 361 Query: 361 RMEQA------MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E+ + F + Q D+ RA T+AL +P + QE Sbjct: 362 YSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHTIAL-----IPDRIRQELYLQE 416 Query: 415 LGNKLGI 421 L KLGI Sbjct: 417 LSEKLGI 423 >UniRef50_B2V7P8 DNA primase n=3 Tax=Aquificales RepID=B2V7P8_SULSY Length = 539 Score = 261 bits (667), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 138/361 (38%), Positives = 212/361 (58%), Gaps = 15/361 (4%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 ++ D+I + LKK G + A CPFHNE+TPSF V+ K + CFGCG GNAI F+M Y Sbjct: 16 NVYDIISDYLSLKKTGSVYVALCPFHNERTPSFVVSPTKNIFKCFGCGISGNAIKFVMEY 75 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 +K+ F + + ++A + + V + E+H + LY L + FY+ L++ + Sbjct: 76 EKISFSDAIIKIAQKYGITVKYIGNDK----EKHLK-GLYSLTKQITDFYKNQLKE--SQ 128 Query: 138 SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML-VTNDQGRS 196 AR+YL KRG+ + I F IG++P + K N + + L G++ V ND + Sbjct: 129 IAREYLRKRGIQPQTIIDFEIGYSPENPERFNKFIQENNISIEDLNKIGLISVHND--KI 186 Query: 197 YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKGRQLYGLYEAQQDN 255 YD+F R++FPI+D +G ++GFGGR + N PKYLNSPET ++ K + LYGL+E Q Sbjct: 187 YDKFSGRIIFPIKDHKGNIVGFGGRAIDENRHPKYLNSPETQVYKKSKVLYGLFENSQII 246 Query: 256 AEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGR 315 E +++++VEGYMD+++L Q GI VA+LGT+ T +H+ LL + VI +D D AG+ Sbjct: 247 KEKSQVVIVEGYMDLISLYQIGIKNVVATLGTALTKEHVNLLKKYVKEVIVMFDSDEAGK 306 Query: 316 DAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNS 375 AA RA E L ++G +R+ + + +DPD L +K G A + + A + FL Sbjct: 307 KAAIRAAEILL---SEGITVRYAYYTEAKDPDELSKK-GLNAVKEIINNAEDIIFFLTRK 362 Query: 376 L 376 L Sbjct: 363 L 363 >UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AB5_SOLUE Length = 580 Score = 261 bits (666), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 150/486 (30%), Positives = 258/486 (53%), Gaps = 11/486 (2%) Query: 9 FINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 F+ L + DIV +I V+L++ G + + CPFH+EK+PSFTV+ QFY CF CGA Sbjct: 3 FVEQLKSSVDIVSVIGEYVRLRRSGTQRYMGLCPFHDEKSPSFTVHVVHQFYKCFSCGAG 62 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 G+ + F+M + + F E ++ L+ + +P S + + R +L + + + Sbjct: 63 GDVVKFVMEKEGISFYEALKSLSERYG--IPMPKRSQYADEDSKLRGSLLVMHELAAENF 120 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 + +L+ +AR Y+ +RGL+ E + F +G+A +++ F + + +G+ Sbjct: 121 RDNLKSQAGDNARAYIAQRGLAPETVEHFGLGYADRSGRALVRLFEQREFSVAQMEQSGL 180 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKGRQLY 246 + G YDRFR R+MFPI +++G++I FGGR L +D PKYLNSPETDI+ K LY Sbjct: 181 VGKRQDGSLYDRFRNRLMFPIHNEQGKIIAFGGRALSPDDEPKYLNSPETDIYKKSHVLY 240 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L+ A+Q + +R ++VEGYMDV+ + G + VA GT+ A +Q + R T+ + Sbjct: 241 NLHRAKQGIRKEDRAILVEGYMDVIGVTAAGFHNVVACCGTAFGAQQVQAIKRHTHRIAV 300 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 +D D AG A+ R+L+ L +G Q+R + L G DPD ++ G EA++AR++ A Sbjct: 301 NFDPDAAGAGASERSLDLLL---AEGMQVRIVELDGGLDPDEYCKERGTEAYQARIDGAK 357 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQ 426 +L + + D+ T +G+ + LP + + R+ + ++ +G+ Sbjct: 358 GYFYWLADRARAKHDMRTSEGKVAVLNFLLPKVQNIADSLERMTVANDVAGYIGVDQGMV 417 Query: 427 LERLMPKAA---ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE-NKLPGL 482 L+ A+ E + RP L+ +LI LL + A L+ ++ L+ LP Sbjct: 418 LDHFKKAASDRNERAIPRPANPLRHDERMLLIALLTHSEGRAELIEQMKVLETIETLPSR 477 Query: 483 GLFREL 488 +F+ + Sbjct: 478 RIFQAV 483 >UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWR0_9FIRM Length = 632 Score = 260 bits (665), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 158/447 (35%), Positives = 240/447 (53%), Gaps = 23/447 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I + DIV +I+ V L K+G N+ CPFH + PSF+V+ +KQ Y Sbjct: 1 MAG-IPNDIIESVKKEADIVAIINQYVALTKRGNNYTCSCPFHEDNNPSFSVSPDKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP---FEAGSGPSQIERHQRQTLY 117 CF CG GN FL + + F E V+++A + N+ + FE G SQ HQR L Sbjct: 60 CFSCGRGGNVFGFLQEMEGISFPEAVKKVAELSNIALDSRYFETGQAVSQ--PHQR--LL 115 Query: 118 QLMDGLNTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 L + FY L Q VA SA YL++R L E ++ F +G AP +++ Sbjct: 116 DLHEKARDFYHFYLTQTVAGESAYAYLKQRELKEETLSDFHLGLAPDNPQLLIQYLSEAG 175 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT------PKY 230 ++ ++ +G+ QG DRF R++FP+ D++GR + F GR+ D+ KY Sbjct: 176 FSQDEMLQSGIFYEASQGL-MDRFHGRIIFPLEDRQGRTVAFSGRIYQADSGDEQKVAKY 234 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 +NSPETDIFHK +Y +A+ N++L+ EGY+DV+AL+Q G AVA++GTS T Sbjct: 235 VNSPETDIFHKSSLIYHFAQARPHIRRLNQVLICEGYLDVIALSQAGFPQAVATMGTSLT 294 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETA--LPYMTDGRQLRFMFLPDGEDPDT 348 + H+ L + T +I +DGD AG+ A RA E + LP T ++ + +P DPD Sbjct: 295 SQHLSQLGKVTQEIIFAFDGDAAGQKATARAFELSLTLPRHT----VKAVAIPGKMDPDE 350 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 ++ G ++F++ + QA+P FL N L + L+ + RA L L++Q+P R Sbjct: 351 WIKSRGADSFKSLINQAIPRYEFLKNYLQQEYQLADLEQRALYINRLLDLVAQLPSPIER 410 Query: 409 IYLRQELGNKLGILDDSQLERLMPKAA 435 Q L + G LD + LE + + + Sbjct: 411 TMRLQALAEEFG-LDLAMLEEQLAQVS 436 >UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 RepID=C0JZY3_9BACT Length = 658 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 165/477 (34%), Positives = 246/477 (51%), Gaps = 14/477 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ + +L + D++ V LK++G + ACCPFHNEKTPSF V + Y CFGC Sbjct: 2 IPQETVQLILDTARVEDVVGDFVTLKRRGSSLWACCPFHNEKTPSFHVEPSRGIYKCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G A+ F+M Y+KL + E ++ LA +++EV + S R + ++L + + Sbjct: 62 GKSGTAVGFVMEYEKLSYTEALKYLARKYHIEVKEKEESAEDIAARQRNESLLAVSEFAF 121 Query: 125 TFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+ L + A QY RGL E IA++ +G+AP + + + + L+ Sbjct: 122 DFYKDQLATDEGRAVAVQYFHSRGLEDETIAKYGLGWAPKSKNALTEAAKKEGYKDEYLL 181 Query: 184 DAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFH 240 + G+ D G +DRF +RVMFPI GRVI FGGR L D KY+NS E++I+ Sbjct: 182 ETGLCAQWDTDGSLHDRFYDRVMFPIHSVSGRVIAFGGRTLFTDKSVAKYVNSKESEIYV 241 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R LYG+Y A+ + ++ +VEGY+DV+++ Q GI VAS GTS T + I+L+ R Sbjct: 242 KSRSLYGIYFAKSAISRADKCYLVEGYLDVLSMHQLGITNVVASSGTSLTVEQIRLIKRF 301 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK---EGKEA 357 T NV YDGD AG AA R ++ L +G ++ + +PDG+DPD+ RK E EA Sbjct: 302 TENVTIMYDGDPAGIHAALRGIDLILK---EGMNVKVVLIPDGDDPDSYARKHTLEEVEA 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F A EQ AF + L+ + + P RA L ++ +P R + Sbjct: 359 FIAANEQ--DFIAFKADLLLGEAG-NDPLKRANLINDIADSVAGIPDAVKRSVYTDAISA 415 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 K I D +R+ + E Q +R +R V + AT PP+ L Sbjct: 416 KFRIDTDILTDRVR-RTREKIQGEERTQAQREAIRARREEDVPRTQEATYTPPVNEL 471 >UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ESB3_9LACO Length = 616 Score = 260 bits (664), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 143/366 (39%), Positives = 212/366 (57%), Gaps = 13/366 (3%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 DI D+I V+L + GK F CPFH E+TPSF+VN +KQF++CFGCG GN FLM Sbjct: 2 DISDVIGHYVQLHQSGKGFVGLCPFHEEQTPSFSVNEQKQFFYCFGCGRGGNVFQFLMEL 61 Query: 78 DKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQLM----DGLNTFYQQSLQ 132 + F E V E+A + N+++P + +G I + +LM + ++ + Sbjct: 62 KHIPFTEAVAEVAQLANVDLPSQYLNNGDRSIHQENNTPNGKLMVMHEEAAKLYHHILMN 121 Query: 133 QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI-DAGMLVTN 191 P A +YL+ RG++ E+I F +GFAP +LK F N L+ +G+ V + Sbjct: 122 TPAGAQALKYLKGRGMTDELINDFNLGFAPE--QRILKPFLEQKINDYQLLRKSGLFVED 179 Query: 192 DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPETDIFHKGRQLYGL 248 + G +DRF +RVMFP+R++ GRVIGF GRV+G DTPKYLNSPET IF+K R L+ Sbjct: 180 NNGGLHDRFVDRVMFPLRNQNGRVIGFSGRVIGKVPADTPKYLNSPETPIFNKRRTLFNF 239 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 A+++ +++ + EG+MDV++ G VAS+GTS T + + +L RA V CY Sbjct: 240 DIARKEARGTSKIYLFEGFMDVISAYSAGAKNGVASMGTSLTEEQVGILGRAVRQVDICY 299 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM--EQAM 366 DGD AG++A RA+ + G QLR + LP G DPD V++ G + F + ++ Sbjct: 300 DGDSAGQNAIDRAVTLFRDHQPQGMQLRVVQLPAGIDPDEYVQQNGADKFAKYLVDQEET 359 Query: 367 PLSAFL 372 P+ +L Sbjct: 360 PVDFYL 365 >UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C33841 Length = 649 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 147/417 (35%), Positives = 234/417 (56%), Gaps = 10/417 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + ++ R +I ++I V LKK+GKN+ CPFHNEKTPSF+VN +KQ ++CFG Sbjct: 5 RIPSDTLEEIKERANIYEVISEHVVLKKRGKNYVGLCPFHNEKTPSFSVNPDKQLFYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP-FEAGSGPSQIERHQRQ-TLYQLMD 121 CGA GNAI FLM K F + V ELA + + + E+ + + E+ Q LY+++ Sbjct: 65 CGAGGNAIKFLMELKKEPFHQVVLELAKQYKIPIKELESENTKTLQEKISLQDQLYEILA 124 Query: 122 GLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y+ L +P T A YL KR L E I++F IG++P GW+ + + Sbjct: 125 TSANYYEHLLHEPSGTQALDYLINKRRLKLETISKFNIGYSPEGWETLYSYLVEYKKYST 184 Query: 181 SLID-AGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L++ GM+ ++G Y D FR R+M PI+D +GR++ FGGR L N PKYLNSPET + Sbjct: 185 DLLEQTGMIKRRNKGNGYYDTFRGRIMIPIKDVQGRIVAFGGRSLNNQEPKYLNSPETAL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ L ++ ++ ++ +VVEGY DV++L + GIN VASLGT+ + ++ L Sbjct: 245 FSKSKILFALDQSYKNIRNLDQAIVVEGYFDVISLHEAGINNTVASLGTTFSKAQLRKLL 304 Query: 299 RATNN--VICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVR--KE 353 R T++ ++ +D D AG A R + + G+ QL+ + LP+G+D D ++ + Sbjct: 305 RYTDSKQIVFNFDADNAGIKATQRMITEIESLVYSGQVQLKILNLPNGKDADEFIQFNQN 364 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 E + + A ++ ++ DL D ++ + L+S++ R Y Sbjct: 365 STEQYYELISNAPLWFSWQIQQILLNKDLKRADHFEKIVKEMIDLLSKLSDYNKREY 421 >UniRef50_Q1RKH8 DNA primase n=15 Tax=Rickettsia RepID=PRIM_RICBR Length = 599 Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 143/403 (35%), Positives = 220/403 (54%), Gaps = 13/403 (3%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F L R +I D++ +V L ++ N+ CPFH EKTPSFTV+ K+F++CFGC A G Sbjct: 7 FYEVLRNRINISDVVRQKVVLTRKSGNYVGLCPFHQEKTPSFTVSDSKRFFYCFGCKAAG 66 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ-TLYQLMDGLNTFY 127 + I F N L + ++ +LA + +E+P Q E ++ + +++ N F+ Sbjct: 67 DVIKFTSNISGLSYNDSAIKLATDYGVEIP---KLTQKQKEFYEESDEILNILELANKFF 123 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF--GGNPENRQSLIDA 185 + L + YL +R +++E I F+IGFAP G N ++F N N Q L A Sbjct: 124 KSQLTPEILN----YLNERNITNETIKEFSIGFAPRG--NKFEKFFHDKNITNVQ-LGKA 176 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++ + G Y F R+ PIR+ +++GFGGRV+G PKYLNSPET +F K L Sbjct: 177 GLIGKREDGEIYSLFSNRITIPIRNIYNKIVGFGGRVIGQGLPKYLNSPETVVFQKSETL 236 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YG ++A + + N ++VEGY DV++L Q G + VASLGTS T +H+ L+RA + +I Sbjct: 237 YGEHKAISSSYKKNYSILVEGYFDVISLHQAGFSEVVASLGTSVTENHLHKLWRAGDEII 296 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 C DGD AG A+ R + ALP + +++ F+ LP G DPD V K G + F ++ Sbjct: 297 LCLDGDSAGIKASVRTINLALPLINSEKKISFIRLPTGLDPDDAVNKNGVDFFTKLIDTR 356 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + LS ++ + T + +A L S++ LR Sbjct: 357 ISLSEMIWQIEYAGKNFKTAEDKANLEKNLKDYCSKISDSNLR 399 >UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN04_9DELT Length = 565 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 150/433 (34%), Positives = 231/433 (53%), Gaps = 20/433 (4%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + ++ +R + D++ V+LK G CPFH E SF+V ++ FY+CFGC A G+ Sbjct: 9 VAEIKSRLSLEDIVGRYVQLKTVGGRLMGPCPFHQETRASFSVTPDQGFYYCFGCQASGD 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGS-GPSQIERHQRQTLYQLMDGLNTFYQ 128 I+F N + L+F E V +LAA +++ + GS GP+ + R ++ N+F+ Sbjct: 69 IIEFFKNINGLDFNEAVTQLAAEAGVKLARQGGSPGPASMGRAS--VCREVNSWSNSFFG 126 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF----GGNPENRQSLID 184 Q LQ AR YLEKR +S E F +G++P GW+N LK F G PE+ ++ Sbjct: 127 QHLQGSNGQKARLYLEKRQISQETAKAFGLGWSPDGWNN-LKSFLESRGFTPEDG---VE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N++GR YDRFR R++FPI G V+ FGGRV+G+D PKYLNS E+ I+ KG Sbjct: 183 AGVLSRNERGRIYDRFRARLIFPIIALSGAVVAFGGRVMGDDEPKYLNSSESPIYTKGEH 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLY+A+ +R+L+ EGY+DV+AL QYG + LGT+ T ++ + V Sbjct: 243 LYGLYQARTHITRSSRVLLTEGYLDVMALHQYGFENSCGILGTALTKAQVKRMAGLAREV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + +DGD G+ A AL++A + G R + LP+GED +L+ G++ E +++ Sbjct: 303 VLIFDGDAPGQSA---ALKSAEMILQAGLTCRVLILPEGEDAHSLLVARGRQGLEDLLQK 359 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 F LST I+ + R Y + + LG+ + Sbjct: 360 TTDGLDFCLKM------LSTNKSPGETMKWVENFITHFKDLSWRSYYIPRVAHVLGLTEK 413 Query: 425 SQLERLMPKAAES 437 E+ P A ++ Sbjct: 414 ELREKFTPAAQKT 426 >UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=Q3AT54_CHLCH Length = 660 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 164/495 (33%), Positives = 254/495 (51%), Gaps = 22/495 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I+++ DIVD++ V L+ G+N+ A PF EKTPSF V+ +KQ Y CF Sbjct: 4 IPPAIIDEVRQAADIVDVVSDYVALQPSGRNYKALSPFTQEKTPSFIVSPDKQIYKCFST 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GN F+M +K+ F+E ++ +A +++ Q E + Q + Sbjct: 64 GKAGNVFSFIMEMEKVPFMEALKLVAQRAGIDISRYTEPKGKQ-EGEEEQGSGAALRWAA 122 Query: 125 TFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L+QP A R ++E+RGL E I RF +G+AP WD +L+ + L+ Sbjct: 123 RMFHSLLKQPAGAEGWRYFVEERGLREETINRFGLGYAPESWDFLLREARREGIKSEQLV 182 Query: 184 DAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFH 240 + G+LV++ + +S YD FR RV+FPI + G+V+GFGGR L +D +PKYLNSPE+ +F Sbjct: 183 ELGLLVSHREKQSLYDSFRHRVIFPIFSRGGQVVGFGGRALVSDERSPKYLNSPESAMFA 242 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYGL+ A+ + R ++VEGYMDV+AL Q G+ AVAS GT+ T ++L Sbjct: 243 KSKLLYGLHFAKNEIRRQERAILVEGYMDVLALHQAGLTNAVASCGTALTRYQAKMLRHY 302 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + +V+ YD D+AG+ + ++ +++ + + LP+G+DPD+ VR+EG++ F Sbjct: 303 SEHVLFVYDADKAGQKSMMSGIDI---LVSEQMVPQVLMLPEGDDPDSFVRREGRQGFLQ 359 Query: 361 RME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 E M F STP+ +A + + I+ +P R QEL K+ Sbjct: 360 YAESHTMGFQDFQLAFFEAAGAFSTPEQKAEALRVMVRTIALIPKRAQRELYAQELSKKV 419 Query: 420 GILDDSQLERLMPKAAE----------SGVSRPVPQLKRTTMRILIGLLVQNPEL--ATL 467 G L + L L+ A S S P T + P L A Sbjct: 420 G-LTVTALRELLGNATSAVAKQQSCTPSKASATAPTSSSATNATSAPTIPHAPNLPNAQA 478 Query: 468 VPPLENLDENKLPGL 482 +PPL L++ L L Sbjct: 479 LPPLSVLEKTFLKAL 493 >UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_CYAP4 Length = 690 Score = 258 bits (660), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 159/420 (37%), Positives = 246/420 (58%), Gaps = 18/420 (4%) Query: 5 IPRVF---INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 IPR+ I + TDIV+++ V L+K G++F CCPFH +K+PSF+V+ KQFY+C Sbjct: 3 IPRLHPDTIEQVRQATDIVEIVSEYVVLRKAGRDFSGCCPFHEDKSPSFSVSPAKQFYYC 62 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQL 119 FGCGA GNAI FLM K F E V ELA + + V + ++R R+ LY++ Sbjct: 63 FGCGAGGNAIKFLMEIGKRSFSEVVLELAQKYGVPVKTLQDTEKQDLQRKLSLREQLYEV 122 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FYQ +L+QP A QY++ R LS I F IG+AP GW + +G E Sbjct: 123 LALTCNFYQHALRQPQGYHALQYVQAARQLSEATIQEFQIGYAPAGWQVL---YGYLVEQ 179 Query: 179 RQSLID----AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 +Q ++ AG++V G YDRFR+R++ PI D + RV+GFG R L N+ PKYLNSP Sbjct: 180 KQYPVELVEQAGLIVPRKGGGYYDRFRDRLIIPIHDLQSRVVGFGSRTLTNEEPKYLNSP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET++F+KG+ L+GL +A+ A+ ++ +VVEGY DV+AL GI VA++GT+ + + + Sbjct: 240 ETEVFNKGKILFGLDKARGAIAKADQAVVVEGYFDVIALHAAGIKNVVAAMGTALSQEQM 299 Query: 295 QLLFR--ATNNVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVR 351 + L R + +I +D D+AG AA RA+ G QLR + +P+G+D D ++ Sbjct: 300 RQLLRYCESKQIILNFDADKAGAKAAERAIGEIEDLAYRGEVQLRVLNIPNGKDADEYLK 359 Query: 352 KEGKEAFEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + ++ ++QA + L+ + +L+ Q DL D ++ + L+ +P +LR + Sbjct: 360 EYSPNDYQTLIDQAPLWLNWQIERALVGQ-DLRQADQFQQVIQKMVQLLGNLPNASLRTH 418 >UniRef50_Q1MR04 DNA primase (Bacterial type) n=2 Tax=Desulfovibrionaceae RepID=Q1MR04_LAWIP Length = 576 Score = 258 bits (659), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 133/369 (36%), Positives = 209/369 (56%), Gaps = 5/369 (1%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I ++ +R +IVD++ VKL + G + A CPFH E PSF+V+ E F++CFGC A G+ Sbjct: 9 IQEIKSRLNIVDIVRQYVKLHRNGSRWVAPCPFHQETKPSFSVSEEDGFFYCFGCQASGD 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVP-FEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 F + L F ET+E+LA + + F SQ R+ L ++ + T + Sbjct: 69 IFTFYSQINGLSFRETLEQLAEEAGVILTRFSTFGNESQKVHTNRRQLLKIYEFTTTHFV 128 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 +L + R+Y++KRG+S E+ F +G++ WD +++ + Q ++A ++ Sbjct: 129 NNLHSEIGKECREYMKKRGISDEISQYFRLGWSSSDWDTLVRALKRAGFHEQFGVEAALV 188 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKGRQLYG 247 G+ YDRFR R+MFPI G +I FGGR++G+ DT KY+NS ++ ++ KG QLYG Sbjct: 189 GIASNGKFYDRFRGRLMFPISSLSGNIIAFGGRIIGDEDTAKYINSSDSLLYKKGDQLYG 248 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L +A+Q + +L+ EGYMDV+ L QYG AV LGT+ T++ ++ + T+N+ Sbjct: 249 LQQARQSISSGKSILITEGYMDVITLHQYGYTNAVGVLGTALTSEQVKRISGFTSNIEIL 308 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 +DGD GR AA RA E ++T G + + P+GED D++++ GKE FE A Sbjct: 309 FDGDAPGRKAALRACEM---FLTKGLNCKVVLFPEGEDIDSVIKNYGKEFFEKLKNDASE 365 Query: 368 LSAFLFNSL 376 F SL Sbjct: 366 GLQFCIQSL 374 >UniRef50_C7PKU5 DNA primase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PKU5_CHIPD Length = 662 Score = 258 bits (659), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 146/358 (40%), Positives = 209/358 (58%), Gaps = 18/358 (5%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 I +L+R DIV+++ VKLKK+G N+ CPFHNEK+PSFTV K+ + CFGCG GN Sbjct: 7 IQQILSRIDIVEIVGNFVKLKKRGANYLGLCPFHNEKSPSFTVTPSKEIFKCFGCGQSGN 66 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMDGLNTFY 127 AI F+M ++K +VE + LA + +VP E ++ + Q +LY + + ++ Sbjct: 67 AIKFIMEHEKYSYVEALRWLAQKY--DVPIEETEVSPEVRQQQLMADSLYIINNFAREYF 124 Query: 128 QQSL-----QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +L Q V S Y E+RG + E I +F +G++ WD K N L Sbjct: 125 SNTLFNTEEGQNVGLS---YFEERGFTQETIRKFQLGYSLNTWDAFTKTALAKGYNLDYL 181 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GND-TPKYLNSPETDIFH 240 G LVT + D +R RV+FPI ++ G+V+GFG R+L ND PKY+NSPE +I+ Sbjct: 182 QKTG-LVTVRNEQPGDNYRGRVIFPIHNQSGKVLGFGARILVKNDRAPKYVNSPENEIYV 240 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R LYG Y A+ + N L+VEGY DVV+L Q GI VAS GTS T ++L+ + Sbjct: 241 KNRVLYGTYFARHAIDKLNECLLVEGYTDVVSLHQAGIENVVASSGTSLTQHQLRLIKKY 300 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 TNN+ +DGD AG AA R L+ A+ +G ++ + +PD EDPD+ V+K G +AF Sbjct: 301 TNNLTILFDGDNAGVKAALRGLDMAIE---EGLNVKLVLIPDKEDPDSYVQKIGADAF 355 >UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWR2_9BACT Length = 658 Score = 258 bits (658), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 157/470 (33%), Positives = 244/470 (51%), Gaps = 19/470 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I R I+ + A +IVD+I V LK++G N+ ACCPFHNEKTPSF V+ K Y CFGC Sbjct: 2 IDRETIDRIYAAANIVDIIGEYVTLKRKGVNYQACCPFHNEKTPSFVVSPSKGVYKCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQLMDGL 123 G GNA+ FLM ++ + + E ++ +A + +EV E P ++ R+ R++++ + Sbjct: 62 GKGGNAVTFLMEHENMTYPEALKAVAKRYGIEVR-EKEMTPEEVARNDNRESMFVVNSWA 120 Query: 124 NTFYQQSL---QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ L + ++ + +KRG S I +F +GF P D + + Sbjct: 121 AEYFSNYLLHETEGMSVGMTYFRQKRGFSDATIKKFGLGFCPARGDRMSWAALAAGYKEE 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDI 238 L+ G+ + D G +DRFRERVMFP+ + GRV+ FGGR L D KY NSPE++I Sbjct: 181 FLVSTGLSIKRDDGSLFDRFRERVMFPVHNISGRVVAFGGRTLRTDKSVAKYQNSPESEI 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K R+LYGL+ A++ + + ++VEGY DV+++ Q G+ VAS GTS T + I+LL Sbjct: 241 YSKKRELYGLFFAKKAIQQYDFAIMVEGYTDVISMHQAGVENVVASSGTSLTTEQIRLLG 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR----KEG 354 R T N+ YDGD AG A+ R ++ L +G +R + LP +DPD+ R E Sbjct: 301 RFTRNITVIYDGDSAGIHASLRGIDMIL---REGMNVRVVLLPPEDDPDSFARTHTAAEV 357 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +E A E + A L+ + P +A L + I Q+P R +E Sbjct: 358 QEYIRANEEDFLTFKA----KLLLKDAAGDPIKKAALINDMVQSIVQIPDPIQRSVYIKE 413 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRPVPQ-LKRTTMRILIGLLVQNPE 463 + I ++ + + K S R + ++R + R Q PE Sbjct: 414 CARIMDIDENLLIAEVGRKRMASTGDREAEEFVRRQSARFRAEQTAQRPE 463 >UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE Length = 595 Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 169/587 (28%), Positives = 293/587 (49%), Gaps = 26/587 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +I ++ + TDIV L++ +L+K+G N+ CCPFHNEKTPSF V +K+ Y+CFG Sbjct: 3 KISSKTVDAVTEMTDIVSLVENYTRLEKRGANWWGCCPFHNEKTPSFNVVPDKKMYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSG-PSQIERHQRQTLYQLMDG 122 C G I+FLM +KL F+E VE LA +EV +E GS P + + + Q L L D Sbjct: 63 CHKGGGTINFLMEMEKLSFMEAVERLAKNAGIEVIYEGGSYVPDEGAKIKDQIL-DLYDK 121 Query: 123 L-NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPG--WDNVLKRFGGNPENR 179 + +F+ Q P A YL R +S E+I +F +G++P W L F + Sbjct: 122 VAGSFHFLLTQNPTGKKALDYLLSRNVSPEIIEKFNLGYSPKDRKW---LHSFLLSKNYS 178 Query: 180 QSLID-AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q ++ G+ N + ++ F +R+MFPI D+ G+ I FGGR+L D KYLNS + Sbjct: 179 QDFLEKTGLFSKNYKKMAF--FSDRLMFPICDRHGKTIAFGGRILEGDGAKYLNSSDMPQ 236 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + KG ++ + A + + +++ EGYMDV+A Q GI AVA LGT+ T D ++LL Sbjct: 237 YKKGETVFAFHHALAEIRKSKSVILCEGYMDVLAFFQAGIENAVAPLGTALTEDQVKLLK 296 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 +D D+AG++A+++A++ + G +R +++ DG+DP +++K+GKE Sbjct: 297 SFAETFYLAFDSDKAGQEASYKAIKIC---RSMGVNVRVLYIKDGKDPSEILQKKGKEGL 353 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + +E A+ +L + D+S+P+G+A P I + + R +L + Sbjct: 354 KFLLECAIVDDDYLIQIASMRFDISSPEGKASAIAFLFPYIEVLESDIQRESAISKLSSA 413 Query: 419 LGILDDSQL-------ERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 G+ + ++ + + +PV +R+++ + + L L Sbjct: 414 FGVSQQAIFSDYVNREKKALRHIVDEVKQKPVDIRMNAELRLVLAVTANTDLFSRLRSQL 473 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 D LF ++ C T L+ H G + ++ +N + Sbjct: 474 SPDDFEDFYARHLFI-VLEECYRDGAYTYANLM-HRCGEEKLKEIVSQTISKGEFAEN-S 530 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 E+ D +N + ++L+ +++++I R R L E+ ++ L +EL Sbjct: 531 EKIVDDGINFIKQNVLQKQKDKIIGRLRL--LHGEKNIDTVNLTKEL 575 >UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRM9_DESBD Length = 567 Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 164/461 (35%), Positives = 245/461 (53%), Gaps = 19/461 (4%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 I + AR I D+I V+L+ G A CPFH E PSF+VN E FY+CFGC A G Sbjct: 8 LIAQIKARLRIEDVIGRHVELRPAGNRLVAPCPFHQETKPSFSVNPEGGFYYCFGCQASG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGS-GPSQIERHQRQTLYQLMDGLNTFY 127 + I+F + LEFVE VE LA LEV P +I R Q ++ L FY Sbjct: 68 DIIEFYRAINGLEFVEAVEALAREAGLEVRRRPEYMAPGEISRSQCLDMHALA---AVFY 124 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 ++ L + +AR Y+ +RGL+ E++ RF +G+AP GW+ + G AG+ Sbjct: 125 REVLGRAPGQAARDYIARRGLASEIVERFCLGWAPAGWNELRDHLRGRGFPEAVAEKAGL 184 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGRQLY 246 + + +G YDRFRER++FPI + + + FGGR L D PKYLNS ET I+ KG LY Sbjct: 185 VSKSAKGSYYDRFRERLIFPIMNLSAQTVAFGGRSLVDGDGPKYLNSSETPIYTKGEHLY 244 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 GLY+A++ + +L+ EGY+DV++L Q+G + LGT+ T + + L V Sbjct: 245 GLYQARRAMSHSKSVLLTEGYVDVLSLHQFGFENSCGVLGTALTPEQVHRLSGLVGQVDL 304 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 +DGD AGR AA R+ E L T G + R + +P+GED D++++K G+E+ QA+ Sbjct: 305 VFDGDNAGRKAALRSAEMIL---TQGLKCRVLLMPEGEDVDSVLQKNGRESLLELSAQAV 361 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQ 426 + L + S D + A +S++ + Y +L LG L +++ Sbjct: 362 DGLDYCLRQL--SANQSPKD----VLNWATGFMSRLKKLDWKSYYLPKLAAGLG-LSETE 414 Query: 427 LER-LMPKAAESGVSRP--VPQLKRTTM-RILIGLLVQNPE 463 L R L K A++ S P + Q K + + + L+ V+ PE Sbjct: 415 LRRTLGEKGADATASAPARLEQCKPSQLDKNLLAFAVRFPE 455 >UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO Length = 643 Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 159/435 (36%), Positives = 234/435 (53%), Gaps = 20/435 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQ-----GKNFHACCPFHNEKTPSFTVNGE 55 MAGRI +D+ A D V IDA V Q G N CPFH+EK+PSF V+ Sbjct: 1 MAGRIND---DDVKAVRDAVP-IDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPG 56 Query: 56 KQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT 115 K +HCFGC G+ I F+M D L F ETVE LAA + + +E G +R +R Sbjct: 57 KGLFHCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPSHQRGERIR 116 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L + FY ++L+ P A R +L +RG + A F +G++P GWD++ + G Sbjct: 117 LIEAHQAAAEFYVRALESPEAEIGRAFLAERGFDQDAAAHFRVGYSPAGWDHLTRYLRGK 176 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNS 233 + + LI +G+ +G DRFR R+M+PI D G ++GFG R L +D PKYLN+ Sbjct: 177 GFSDKELITSGLSQDGRRG-PIDRFRGRLMWPISDTAGDIVGFGARKLRDDDNGPKYLNT 235 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PET I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DH Sbjct: 236 PETPIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGNDH 295 Query: 294 IQLLFR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDT 348 I++L R + VI +DGD AG+ AA RA E + + PDG DP Sbjct: 296 IKILRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAA---ETYIAIAPDGMDPCD 352 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 L +G ++ +E PL F ++ + DL TP GRA A +++++ +++ Sbjct: 353 LRLAKGDDSVRDLVEPRTPLFEFALRQIVGRYDLETPAGRAAALDEAAAVVAKIKTSSVQ 412 Query: 409 IYLRQELGNKLGILD 423 + +L +GILD Sbjct: 413 REVAVQLAGLVGILD 427 >UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT Length = 602 Score = 258 bits (658), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 151/473 (31%), Positives = 246/473 (52%), Gaps = 20/473 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++A D+VD+I LK+ G + A CPFHNEKTPSFTVN ++Q + CFGC Sbjct: 4 IPPEIIEQVIAANDVVDVIGGYFPLKRSGPVYKAICPFHNEKTPSFTVNPQRQIFKCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL-MDGL 123 GA GN + F+MNY+ L+F+ V++LA +++ S E + L L + Sbjct: 64 GAGGNVLRFVMNYENLDFLGAVKKLAERAGIKIEQTELSAEQAAEYSMLRRLLALHAEAA 123 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + F+ +++P A AR YL+ RG+ +V + +G+AP WD + + + L+ Sbjct: 124 DFFHWHLMKKPSAQIARDYLKSRGIGADVARAWKLGYAPDEWDAMRDFADSRGFSDEELV 183 Query: 184 DAGMLVTNDQ----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 +G++ D+ YDRFR RVMFPI VI F GRVL D KY+NSPET Sbjct: 184 ASGLVKLRDEENPRSEFYDRFRARVMFPICKDTDEVIAFSGRVLQADAKAAKYVNSPETM 243 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KG L+GL ++++ E +V EG +D++ ++G+ +A GT+ T +L Sbjct: 244 LFKKGAVLFGLNKSKRALIEAKSAIVCEGQLDLITAFEHGVQNVIAPQGTAFTEKQAHIL 303 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R V+ C+D D AG AA R+L + L + +R +P GEDPD+++R +G +A Sbjct: 304 KRFVEEVVLCFDADVAGEKAAERSLASLL---AENLLVRVAGMPQGEDPDSMIRGKGADA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F ++ A + + ++ D +TP G+ + IS + LR + + Sbjct: 361 FREQIAGARDFFDYQLDRMVAGPDFNTPRGKMQAVRKMAEFISLIRDSVLRETVMNRVTQ 420 Query: 418 KLGILDDSQLERLM---------PKAAESGVSRPVPQLKRTTMRILIGLLVQN 461 +L I + RL+ P + + + P P + +T+R+L + +++ Sbjct: 421 RLEI-SAQEFVRLLKAPPSKTPDPLSTVTATAPPDPFAEDSTIRLLATVALRD 472 >UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_LACS1 Length = 617 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 144/379 (37%), Positives = 213/379 (56%), Gaps = 11/379 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP I++L + +I+D+I V+L K GKN+ CPFH+EKTPSF+VN +KQ +H Sbjct: 1 MARLIPEATIDELRSNVNILDVISQYVQLHKSGKNWFGICPFHSEKTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF C GN F+M + L F E+V+ +A + N ++ + +Q E + + +L Sbjct: 61 CFSCHRGGNVFKFIMELEGLSFPESVQRVAELANYDLGISIDNSENQNETSENGKIRKLY 120 Query: 121 DGLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE-- 177 Y L V A +YL KRG++ ++I F IGFAP +N+L+ F + Sbjct: 121 KETTKLYHHILVNTVLGEPALEYLHKRGINDDLIEEFEIGFAPE--NNILEAFFKEQKLY 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPE 235 + Q L +G+ + +RF RVMFPIRD G+ I + GR+L +D PKYLNSPE Sbjct: 179 DYQILRKSGLFIERQSTELVERFNGRVMFPIRDTSGQTIAYSGRLLEKRDDAPKYLNSPE 238 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + L+ +A+ ++ EG+MDV+A + GI +AS+GTS T + I Sbjct: 239 TAIFNKRKVLFNFDKAKGIIRREKEAILFEGFMDVIAAYRSGIKNGIASMGTSLTDEQIY 298 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L R T++++ CYDGD AG++A RALE P T L + +P+ DPD +K G Sbjct: 299 ALDRVTSHLVICYDGDNAGQNATKRALEIIEP--TGKFSLEVIKIPEKLDPDEFTKKYGS 356 Query: 356 EAFE--ARMEQAMPLSAFL 372 E F AR ++ PL +L Sbjct: 357 EKFVELARNDRKSPLEFYL 375 >UniRef50_C8PVB6 DNA primase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVB6_9GAMM Length = 739 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 132/308 (42%), Positives = 197/308 (63%), Gaps = 8/308 (2%) Query: 115 TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 +LY L+ + FYQ LQQ + A+ YL KRGL+ I FA+GFAP GW ++ + F Sbjct: 204 SLYDLLTQICQFYQHQLQQ--NSFAQHYLLKRGLTPHTIEEFALGFAPNGWQHLEEAF-- 259 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNS 233 P++ + L G++ T+ GR +D R RV+FPIRD++GRVIGF GR L +D PKY+NS Sbjct: 260 -PQDIEGLKILGLVRTSQNGRDFDLLRNRVIFPIRDQQGRVIGFAGRTLSDDEQPKYINS 318 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 ++ +FHK LYGL+E ++ A+ LVVEGYMDV++L Q G+ AVAS+GT+ Sbjct: 319 SDSPVFHKQAVLYGLFEGRK--AKAKDWLVVEGYMDVISLHQAGVYGAVASMGTALAQSQ 376 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 I+ L + + +DGD AG+ AAWRA+E LP +TDG++L F+ LPD DPD+ V+ Sbjct: 377 IERLLQFNPILTLSFDGDSAGQKAAWRAMEVGLPALTDGKELHFLTLPDNHDPDSYVKAH 436 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G A ++ QA+PLSA+L++SL Q +TP+ R+++ L ++P + LR+ Sbjct: 437 GLLAMRQQIAQAVPLSAYLYSSLTRQYPTNTPENRSKILQQLSALTQKLPKGSYGWLLRE 496 Query: 414 ELGNKLGI 421 ++ NK+G+ Sbjct: 497 DIKNKMGL 504 Score = 102 bits (253), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 28/255 (10%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 I+ ++A DIV +I V+LK+ G F CCPFH EKTPSF VN +K Y+CFGCG Sbjct: 5 AIIDQIIANADIVKIIGKHVELKRSGNEFKGCCPFHGEKTPSFFVNPQKGLYNCFGCGVA 64 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 GNA+ FL Y+ L E ++EL+ +E+P E P ++T L+ Sbjct: 65 GNALTFLKEYENLTAGEALKELSRQTGIELPKE----PVNKSHTYKKTPVPPKPALSQ-A 119 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 + S Q +A S Q L+ S +V R +I A W + F + S I G Sbjct: 120 RASSHQNLAQSPSQALQALSDS-DVAERPSIANAEALWIDAFDDFQTSDNLAASFIPFG- 177 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 YD P D +GN++P+ +S D+ + Q Y Sbjct: 178 --------EYDDVSVGGFLPFDD------------MGNNSPQDSSSSLYDLLTQICQFYQ 217 Query: 248 LYEAQQDNAEPNRLL 262 ++ QQ++ + LL Sbjct: 218 -HQLQQNSFAQHYLL 231 >UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_STRCO Length = 641 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 169/530 (31%), Positives = 256/530 (48%), Gaps = 45/530 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + I ++ ++L+ G N CPFH+EK+PSF V+ K F+ Sbjct: 1 MAGRINDEDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGFF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I F+M D L F E VE LA + + +E G +R +R L + Sbjct: 61 HCFGCQEGGDTITFVMKIDHLTFSEAVERLAGQAGITLRYEEGGYNPSHQRGERIRLVEA 120 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +Y + L P A + R +L RG F +G++P GWD++ + G + Sbjct: 121 HKIAAQWYAEQLATGPEADTGRAFLADRGFDQAAAEHFGVGYSPQGWDHLTRFLRGKGFS 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + L+ +G+ +G DRFR R+M+PIRD G V+GFG R L ++ PKYLN+P+T Sbjct: 181 DKELLLSGLSQEGRRG-PIDRFRGRLMWPIRDIGGDVVGFGARKLYEADNGPKYLNTPDT 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DHI++ Sbjct: 240 AIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKI 299 Query: 297 LFR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 L R + VI +DGD AG+ AA RA E + + PDG DP L Sbjct: 300 LRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAA---ETYIAIAPDGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +G +A +E PL F ++ + DL TP GRA A P+++++ + + Sbjct: 357 AKGDDAVADLVEPRTPLFEFALRQIVARYDLDTPAGRAAALDEAAPVVARIKNSGAQHEV 416 Query: 412 RQELGNKLGILDD----SQLERLMPKAAESGVSRPVPQLKR------------------- 448 +L LGILD ++ +L A + G P P ++ Sbjct: 417 AVQLAGMLGILDTQFVVKRIAQLARWARDRGGKGPAPDQRQRGGGPQQQAGPMTATPRGP 476 Query: 449 ---------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV 489 T R L+ L +Q PEL + +DE P RE + Sbjct: 477 ALNLRNPVFATERELLKLALQRPELVSPAFDAYGVDEFTAPPYAAVREAI 526 >UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38X97_LACSS Length = 627 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 156/454 (34%), Positives = 239/454 (52%), Gaps = 14/454 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP I+++ ++T+IVD++ V+LKK GKN CPFH+EKTPSF+V+ EKQ +H Sbjct: 1 MAGKIPNEVIDEIRSQTNIVDVVGQYVQLKKAGKNLFGVCPFHDEKTPSFSVSEEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT--LYQ 118 CF CG GN FLM +++ F E + ++A V P+ + R + Q Sbjct: 61 CFSCGRGGNVFKFLMELEQISFPEALTKVADFAG--VTLADSYKPTAVHRESSEVTQFKQ 118 Query: 119 LMDGLNTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 L N ++ L VA A YL +R ++ +I F+IG+ P D +L F Sbjct: 119 LYQQANELFKHILTSTVAGQPALDYLHERQMTDALIETFSIGYLPDQSDLLLTFFQNKDI 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPE 235 Q L +G+ + G+ +DRF RVMFPIR+ +G VI F GRVL D PKYLNSPE Sbjct: 179 PYQVLRQSGLFIETQTGKLHDRFSGRVMFPIRNAQGEVIAFSGRVLTKQPDQPKYLNSPE 238 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + L+ A+Q + ++ + EG+MDV+A + VAS+GTS T + + Sbjct: 239 TVIFNKRKVLFNYDLAKQTIHQSKKVYLFEGFMDVIAAYSADVVNGVASMGTSLTTEQLN 298 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 LL + ++ CYDGD+ G +A RA+ + T +L + LP G DPD VR+ G Sbjct: 299 LLAQQAQELVVCYDGDQPGIEAMKRAINLLQQHTT--LELSVVVLPGGVDPDEYVRQYGG 356 Query: 356 EAFEARMEQA--MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLR 412 F+ ++ P+ AF L ++L + AL ++++V + +YL+ Sbjct: 357 PQFKETLQNGTETPI-AFELRYLKQGLNLDNEKDQLDYVQQALEVVARVESPLAIEVYLK 415 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQL 446 Q + GI D+ +L + P+ Q+ Sbjct: 416 QVEADS-GITLDTLKRQLQTVRVKHATQVPINQV 448 >UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW47_9BACT Length = 599 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 144/423 (34%), Positives = 231/423 (54%), Gaps = 6/423 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M IP+ I ++ DIV +I ++LK+ GK F CPFH+EKTPSF VN +K+ + Sbjct: 1 MVHFIPQEKIAEIQFAADIVQIISEYIQLKQSGKAFIGLCPFHSEKTPSFFVNPDKKLFK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G F+M + ++FVE V+ +A+ +++ + + + + ++ LY+ Sbjct: 61 CFGCGEGGTVFQFVMKQEGMDFVEAVKLVASKSRVDLT-QIYAKETSLSSSKKTHLYETT 119 Query: 121 DGLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 TFYQ+ L + AR YL KR ++ I F IG+AP WD+++K G + Sbjct: 120 RFAATFYQKMLLDAMKGKKARDYLLKRKINDHSIKNFCIGYAPAEWDSLVKMCKGGNVSM 179 Query: 180 QSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L AG+++ + SY DRFR+R++FPI D R +V+GFGGR L + PKYLNSPET + Sbjct: 180 YQLQQAGLIIQKKERDSYYDRFRDRLIFPILDIRKQVVGFGGRALDDSLPKYLNSPETVL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K LYG+ A+ + +++++EGY DV+ Q+GI +AVA LGT+ + H++ L Sbjct: 240 FNKSNILYGIDIAKSAILKKQKVILMEGYTDVIMAHQHGIEWAVAVLGTAISKQHLRSLR 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI D D AG+ ++ R L+ ++ + ++ LP G DP + EG E F Sbjct: 300 QYCSRVILLLDADSAGQKSSDRNLDI---FIEEEFDVKIAQLPKGYDPCDFLLAEGPEKF 356 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++ A F + D+ST G+A L + P R L + + + Sbjct: 357 LSYIDSAKDFFHFKIEFAATKWDMSTVHGKANALNNVLATAMKTPDAIKRNLLIKLISEE 416 Query: 419 LGI 421 + I Sbjct: 417 MSI 419 >UniRef50_D1B4H3 DNA primase n=2 Tax=Campylobacterales RepID=D1B4H3_SULD5 Length = 552 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 140/399 (35%), Positives = 217/399 (54%), Gaps = 13/399 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + I +L R DIV++I + ++LKK G N+ CPFHN+ +PS V+ KQ YHCF C Sbjct: 2 IDKTSIENLKQRLDIVEVIGSYLELKKNGANYKCVCPFHNDTSPSLVVSPSKQIYHCFAC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G++I F+M Y+KL + E++E+LA M N + + +G + R +LM+ LN Sbjct: 62 GAGGDSIKFVMEYEKLSYPESIEKLANMVNFSLTYTTQNGAQKENR-------KLMENLN 114 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY + L + + SA+ YL +RG+S +I +F IG+AP + + L + I+ Sbjct: 115 AFYVKELDKHL--SAKNYLSQRGISEAMIEKFEIGYAPSSF-STLDFLSKHAYTMSEAIE 171 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+ + + Y RF ERV FPI +++GFGGR L N KY+NSP+T F+K + Sbjct: 172 YGVAGIGENNQPYARFIERVTFPIYAPSNKLVGFGGRTLSNHPAKYVNSPQTKHFNKSQL 231 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYG A++ + L++ EGY+DV+ L Q G +AVA+LGT+ T +H+ L+ R V Sbjct: 232 LYGYPLAKETIFKRKALIITEGYLDVIMLHQAGFTHAVATLGTALTHEHLPLISRGDPEV 291 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I YDGD AG +AA +A + G + F G DP +V+K +A + Sbjct: 292 IVAYDGDEAGINAALKASMLLSQHALRGGVVLF---SQGMDPADMVQKGLLDALNHLFRK 348 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVP 403 P F ++ + +L P + A+ + +P Sbjct: 349 PQPFVEFALERMVKKHNLKDPLSKQNALEEAMAYLKTLP 387 >UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESS6_AMOA5 Length = 640 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 155/449 (34%), Positives = 238/449 (53%), Gaps = 21/449 (4%) Query: 19 IVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYD 78 I +++ V LKK+G+N ACCPFH+E+TPSF+V+ K FY CFGC A G++I F+ + Sbjct: 16 IEEVVGDFVTLKKRGQNLWACCPFHHERTPSFSVSPSKGFYKCFGCDAAGDSIAFIKAIE 75 Query: 79 KLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 + F+E V+ LA +++ + E G I +H+R +LY LM N +Y Q+L + Sbjct: 76 GISFIEAVKYLATKYSIPIQ-ETEEGHKDIAAQHERDSLYILMKLANNYYIQNLWEHSEG 134 Query: 138 S--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGR 195 YL++RG++ + I +F +G++ W + L++ L+ ++Q + Sbjct: 135 QRIGHAYLKERGITDDFIKQFELGYSLDSWQG-FHEYALKQGYTDGLLEKAGLIVHNQEK 193 Query: 196 SYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFHKGRQLYGLYEAQQ 253 YDRFR RV+FPI + G+VI F R+L ++ PKY+NSPET I+HK LYG+Y+A+Q Sbjct: 194 LYDRFRGRVIFPIHNLSGKVIAFAARILKPADNQPKYVNSPETPIYHKSDVLYGIYQAKQ 253 Query: 254 DNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRA 313 + ++ +VEGY DV++L GI VAS GT+ T IQL+ R T ++ +DGD A Sbjct: 254 KIKQVDKCFLVEGYTDVISLHMAGIENVVASSGTALTDSQIQLVSRFTKHITVLFDGDTA 313 Query: 314 GRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-EQAMPLSAFL 372 G AA R ++ L G ++ + LP GEDPD+ +K AF+ + E F Sbjct: 314 GIKAALRGVDKIL---EKGLHVKVILLPPGEDPDSYSKKLDSLAFQTYLQEHEQDFITFK 370 Query: 373 FNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL----GILDDSQLE 428 LM + P +A L I+ +P R Q+ L G+L + Sbjct: 371 AKLLMEGIG-DDPTQKAEAIKEILQSIALIPDAVNRTLFLQQCSRLLDINEGVLLGEHNK 429 Query: 429 RLMPKAAESG-----VSRPVPQLKRTTMR 452 L+ K E V PV +L+ T R Sbjct: 430 ILVRKEKEHHRPHKLVHNPVNELQLTAKR 458 >UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZA5_9CLOT Length = 597 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 143/404 (35%), Positives = 221/404 (54%), Gaps = 17/404 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+P F+ +L R +I+D++ V LK+ G+ CPFH EKTPSF VN E+ ++HCFG Sbjct: 9 RLPDSFLQELKDRNNILDVVSGYVNLKRSGRTMSGLCPFHGEKTPSFHVNAEQGYFHCFG 68 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I F+ + L++++ V+ LA +E+P + G + H R +Y+ Sbjct: 69 CGAGGDVITFIRKIENLDYIDAVKFLAQRAGMELPED---GRDEAAAHIRGRIYEANREA 125 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ + L +A YL RGL+ I F +G++P ++++ + +I Sbjct: 126 ARFFHRCLYSEEGKNALAYLRGRGLTERTIKHFGLGYSPNSRYALVRQLRSLGFRDEEII 185 Query: 184 DAGMLVTNDQGR--SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 A + G + DRF +RVMFPI D RG VIGFGGR++ + PKYLN+ +T +F+K Sbjct: 186 RANLGFQGRYGSKGALDRFADRVMFPIIDLRGNVIGFGGRIMTDQKPKYLNTSDTMVFNK 245 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 + LY L A+ NA RL++ EGYMDV+AL Q G AVA+LGTS T + +L+ R Sbjct: 246 SQNLYALNFAK--NAGEKRLILAEGYMDVIALHQAGFPTAVATLGTSLTTEQARLIARYA 303 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTD-GRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + CYD D AG+ A R A+P + + G +R + + G+DPD +R G + A Sbjct: 304 QEAVICYDSDGAGQKATAR----AIPMLREAGLLVRVLTVTGGKDPDEFIRSHGDQG-PA 358 Query: 361 RMEQAMPLSA----FLFNSLMPQVDLSTPDGRARLSTLALPLIS 400 R +Q + S + +DLS PDG+ T + +++ Sbjct: 359 RFKQLLEASGNDVEYRLQKAANGLDLSQPDGKIAYLTACVSILA 402 >UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446E1 Length = 613 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 186/600 (31%), Positives = 288/600 (48%), Gaps = 52/600 (8%) Query: 13 LLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAID 72 +LA TDIVDL+ VKL++ G N+ CPFH EKTPSF VN + YHCFGCG G AI Sbjct: 1 MLAATDIVDLVGRYVKLRRVGTNWRGLCPFHGEKTPSFYVNPARGSYHCFGCGVGGTAIR 60 Query: 73 FLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQ 132 F+M +D L+F++ V+ LA + + E ++ R L +L ++ ++ L Sbjct: 61 FVMEHDGLQFMDAVKRLADSAGIRIQEEVWDANAERTAKIRNGLVKLHRDISAWFHLLLM 120 Query: 133 Q-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 + VA AR YL+ RG++ + +G+AP ++K + L+ G+L Sbjct: 121 KGQVAEEARAYLKSRGINAATAKSWEMGYAPASTPMLMKWAEEHKYTENLLVAGGILARG 180 Query: 192 DQ-----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQ 244 D+ G+ Y RFR R+MFPIR+ G VI F GR+L ++ KYLNSPET +F+K + Sbjct: 181 DEDSGRGGQIYARFRHRLMFPIRNDYGEVIAFSGRLLDSNAKAAKYLNSPETMLFNKSKV 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+GL ++++ + NR +V EG +D++ + G VA LGT+ T H ++L R V Sbjct: 241 LFGLDKSKRAIIKANRAVVCEGQIDMIMAFESGFENVVAPLGTAFTEFHARMLKRHAEEV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + C+D D AG AA RA P G ++ LP GEDPD+L+RKEG +AF+A+++ Sbjct: 301 VLCFDSDNAGYKAAERAFHILAP---TGLVVKVAPLPQGEDPDSLIRKEGPQAFQAKLDD 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A + + +++ + R + +I + R Q++ +L IL+ Sbjct: 358 ARDFFDHMIDYASSTRNMAETREKTRFAGDMATMIQLLDNNIARDAAIQKVCVRLNILES 417 Query: 425 ---SQLERLMPKAA-----------------------------ESGVSRPVPQLKRTTMR 452 Q+ RL A E+ + P P R Sbjct: 418 DFRKQVARLAKSIANQQQKAAAGKNGGNGASGSGASGATDRPEEAELPPPHPH-----AR 472 Query: 453 ILIGLLVQNPELATLVPPLENLDE-NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 +I L V + E+ L+ LD +PG L ELV SQ L+T L + T Sbjct: 473 QMIRLAVTSAEVLALIRTHAQLDALAAVPGCELL-ELVFK--SQSDLSTSGGLSAFLTTL 529 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 A S + ++ +T +L H+ LE + + R R GL+ +E + L Sbjct: 530 TPAEERAFSRVVAEPPQRVSIETALQTLQHIEFQGLENLYQNVTTRLRQPGLAKDEVILL 589 >UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q583_CATAD Length = 700 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 163/456 (35%), Positives = 239/456 (52%), Gaps = 22/456 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHAC-CPFHNEKTPSFTVNGEKQFY 59 MAG+I I+ + IVD++ A V+L+ G CPFH+EK+PSF V+ K FY Sbjct: 1 MAGQIKDEDIDRVRQAASIVDVVGAVVQLRNGGGGNLKGLCPFHDEKSPSFQVSPAKNFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ + F+M YD L F E VE LA +N+E+ + G +Q R +R L + Sbjct: 61 HCFGCGVGGDVLKFVMEYDHLSFPEAVERLAGQYNIELRYTEGGYTNQGVRSERTRLIEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ L P A AR+ L RG I +F +GFAP W+++++ G Sbjct: 121 HKAAAEYFVDQLSTPAAAHARELLAARGFDAGAIEQFHVGFAPESWESLVRHLRGRGFTD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETD 237 + ++ G+ +G + DRFR R+M+PI D G VIGFGGR L + DTPKYLNSPET Sbjct: 181 KEILTGGLASEGRRG-AMDRFRNRLMWPIADLSGDVIGFGGRRLTDDPDTPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+ K LYGL A+++ + R +VVEGY DV+A G+ AVA+ GT+ +HI++L Sbjct: 240 IYKKSSVLYGLEMARREIVKQERAVVVEGYTDVMACHLAGVPTAVATCGTAFGEEHIKIL 299 Query: 298 FR--ATNN------VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 R A N V+ +DGD AG+ AA RA ++T Q P G DP L Sbjct: 300 RRLLADRNQFLGVEVVFTFDGDSAGQKAAMRAYLDEDKFVT---QTFVAVEPSGMDPCDL 356 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 +G A + L F+ + + + +L +GR P+++++ LR Sbjct: 357 RLAKGDAAVRELVATRTRLFEFVIRAELAKQNLDESEGRVHALRTTAPIVAKIRDSALRN 416 Query: 410 YLRQELGNKLGILD---DSQLERLMPKAAESGVSRP 442 + L LG+ + S + RL+ A SG+ RP Sbjct: 417 DYTRRLAGWLGLEERDVQSAVRRLL---AASGI-RP 448 >UniRef50_A3VV42 DNA primase n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VV42_9PROT Length = 625 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/367 (39%), Positives = 208/367 (56%), Gaps = 7/367 (1%) Query: 9 FINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 F++++ AR D+I VKL K+G+ F PF EKTPSF VN EK + F G G Sbjct: 8 FLDEIRARLRASDVIGRTVKLTKEGREFRGLSPFTQEKTPSFFVNDEKGKFFDFSAGKSG 67 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQLMDGLNTFY 127 + I FLM L F E V LA + L++P S P + ER + + + + F+ Sbjct: 68 DIIGFLMETQNLAFPEAVASLAELAGLDLP---KSSPEEEERARSAKGVAEANLEAAKFF 124 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 ++ L + A YLE+RG+ F +G+AP + + L+DAG+ Sbjct: 125 REQLTRKPGKHALAYLEQRGVGAAARGAFGLGYAPGDRTALRDTLMEKGFDLSCLVDAGL 184 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKGRQLY 246 ++ D G YD+FR+RVMFPI RG+VI FGGR L + KY+NSPET +FHK LY Sbjct: 185 VIRPDDGEPYDKFRDRVMFPIL-SRGKVIAFGGRALSRSVSAKYMNSPETVLFHKSATLY 243 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 G A++ + LL+ EGYMDV+AL + G AVA LGT+ T + LL+R + + Sbjct: 244 GYDRARKKLKDDTPLLLAEGYMDVIALDEAGYA-AVAPLGTAVTEAQLGLLWRVCDEPVV 302 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 C DGDRAG+ AA+R ++ ALP + G+ LRF FLP+G+DPD ++R +G +A + A Sbjct: 303 CLDGDRAGQKAAFRVIDRALPLLAPGKSLRFAFLPEGKDPDDVLRGDGAKAMAQIVAAAR 362 Query: 367 PLSAFLF 373 PL+ L+ Sbjct: 363 PLAEVLW 369 >UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL95_9FIRM Length = 596 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 139/387 (35%), Positives = 219/387 (56%), Gaps = 13/387 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ +I +++ R DI ++I V+L+++G+ CPFHNEKTPSF V + Q ++CFGC Sbjct: 2 IPQEYIQEVVRRNDIEEVIGQYVQLRRRGRTLSGLCPFHNEKTPSFVVYPDTQSFYCFGC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD-GL 123 GA G+ I+F+ Y+ L +VE+V++LA+ + +P E E RQ L ++ Sbjct: 62 GAAGDVINFVRKYNNLGYVESVKQLASRAGMPLPEEEDK-----EARARQRLLEINRCAA 116 Query: 124 NTFYQQ-SLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY+Q + + P A AR+Y EKRGLS I RF +G+AP + +L Sbjct: 117 RYFYEQLNAKTPEAALARRYWKEKRGLSDAAIRRFGLGYAPEDFSGLLHYLRRRGFREDE 176 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 L +G++ + +G YD FR RVM PI D RG +I FGGRVL + PKY+NSPET ++HK Sbjct: 177 LEHSGLIKRSAKGNLYDIFRHRVMVPIIDVRGSIIAFGGRVLDDSKPKYINSPETVVYHK 236 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 R L+ L A++ ++ R ++ EGYMDV+++ + G + AV + GT+ T + ++LL Sbjct: 237 SRTLFALNIAKKSASK--RYILCEGYMDVISMHEAGFDTAVCACGTALTPEQVKLLSEYA 294 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + V+ YD D AG+ A R+L + ++ + +DPD ++K G+E F+ Sbjct: 295 DEVVLSYDSDEAGQKATERSLGL---FANSPVKVSVLSYQGAKDPDEFIKKYGRERFDML 351 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGR 388 + + F + DL + DGR Sbjct: 352 LNGTANPTEFQLKKAKAKYDLRSDDGR 378 >UniRef50_B8IZR5 DNA primase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IZR5_DESDA Length = 580 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 145/372 (38%), Positives = 214/372 (57%), Gaps = 24/372 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I + R +IVD++ V+LK+ G + A CPFH E PSF+VN ++ ++CFGC A Sbjct: 4 RDAIRAIKERMNIVDVVRRYVELKRNGPRWVAPCPFHQETKPSFSVNEDQGLFYCFGCHA 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQI---------ERHQRQTLY 117 G+ DF + L+F ET+E+LAA + + E G G ++ R Q +Y Sbjct: 64 SGDIFDFYSRINGLDFKETLEQLAAEAGITI--ERGPGGARRQGEERERRSSRQQMLRMY 121 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNV---LKRFGG 174 +L G + +L P R Y+EKRGLS E++ F +G+A W ++ L+R G Sbjct: 122 ELAAG---HFAATLNGPDGAECRTYMEKRGLSQEIVQHFGLGWAKREWQSLADSLRRAGF 178 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNS 233 + + I+AG+L +D GR+YDRFR R++FPI+ ++I FGGR++ + D KY+NS Sbjct: 179 DA---RMAIEAGLLGQSDNGRAYDRFRGRLIFPIKSLSNQIIAFGGRIIADEDEAKYINS 235 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 +T I+ KG LYGL +A++ R L+ EGYMDV+ L Q+G + AV LGT+ T + Sbjct: 236 ADTPIYKKGEHLYGLAQARKGMVTKGRALLTEGYMDVLTLHQFGYDNAVGVLGTALTPEQ 295 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 I+ L + + +DGDRAGR AA R+ E L T G + +P+GED D+L+R Sbjct: 296 IKRLSGFVSQLTLLFDGDRAGRKAALRSCEMLL---TRGLACSVVLMPEGEDIDSLLRGS 352 Query: 354 GKEAFEARMEQA 365 G EAFE QA Sbjct: 353 GPEAFEELQAQA 364 >UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 Length = 590 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 188/595 (31%), Positives = 291/595 (48%), Gaps = 55/595 (9%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG-CGAHG 68 + ++ + DIV I KL K G+ CPFH+EK SF V E Q +HCFG C G Sbjct: 5 VEEIKQKLDIVSFIGQYTKLTKAGRTMRGICPFHSEKHGSFFVYPEAQNWHCFGACNTGG 64 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIE---RHQRQTLYQLMDGLN 124 + F+M + L+F +E LA +AG S PSQI R QR+ LY++ Sbjct: 65 DIFAFVMKKEGLDFKGALELLAE--------KAGVSLPSQINPQIRDQRERLYEINLAAA 116 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y L P A SAR YL+ RGL+ + +A F +G+A P W + + L+ Sbjct: 117 QYYHNLLLNSPQAESARSYLKSRGLNEQSLADFQLGYALPEWQGLYDYLKERSYTDEDLL 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG++V +D+GR +DRFR +++PI + +G++ GFG RV+ N PKY NSP+TD+F+K Sbjct: 177 KAGVIVRSDEGRIHDRFRNNIIYPIANYKGQIAGFGARVMDNSQPKYRNSPQTDLFNKSS 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL+ A E N+ ++VEGYMD + Q G VA +GT+ T I L+ R T + Sbjct: 237 LLYGLHLASASIREKNQAIIVEGYMDAIMSHQGGFTNTVACMGTALTDRQIALVKRQTKH 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 +I D D AG +A RA++ + ++R G+DPD ++R + ++ ++ Sbjct: 297 LILGLDADSAGEEATLRAIDYENQIES---EIRVAVPEGGKDPDEIIR-HAPQTWQEILD 352 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A PL ++F +DLS+ G+A L+ LP+IS++ + + +L + Sbjct: 353 NARPLLDYIFEHSQKGLDLSSAAGKAGLTDRLLPIISKMEDGVRQSHYLGKLAEMVSTSQ 412 Query: 424 DSQLERLMPKAAESGV---------SRPVPQLKRTTM-RILIGLLVQNPELATLVPPL-- 471 + LER+ E+ + S+ V K + + LL ++PEL+ L Sbjct: 413 NRILERMKKLKNETRITKVLEKEAPSKTVSAAKNPALEEYALSLLFKSPELSRFAGKLHP 472 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL-SMWDDIADKNI 530 E L+ + +REL+ SQ + AA E L +D++ +KN Sbjct: 473 EYLE------IPQYRELL-AVYSQSA---------EKDNLRAALDENLREYYDNLMNKNP 516 Query: 531 AEQTFTDSLNHMFDSLLELRQEEL--IARERTHGL---SNEERLELWTLNQELAK 580 A D +D L LR+ L +A + L S E E TLN + K Sbjct: 517 ANDNIEDKF---YDLCLRLRERYLRNLAVKLNQALNEISQPETAEYQTLNDQCVK 568 >UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE Length = 730 Score = 254 bits (649), Expect = 6e-66, Method: Compositional matrix adjust. Identities = 141/417 (33%), Positives = 228/417 (54%), Gaps = 12/417 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I +V I+ +L IVD++ V L+K+G N+ CPFHNEKTPSF+V+ K CF C Sbjct: 2 IDQVTIDRILDAAQIVDVVSEFVTLRKRGVNYVGLCPFHNEKTPSFSVSPAKGLCKCFSC 61 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GN++ F+M ++++ + E ++ LA +N+E+ + + + R++++ + + Sbjct: 62 GKGGNSVHFIMEHEQMSYYEALKYLAKKYNIEIKERELTNEEKQAQTTRESMFIVNNFAR 121 Query: 125 TFYQQSLQQPV--ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 ++Q L+ V + Y +RG ++I +F +G+ D + + ++ L Sbjct: 122 DYFQNILKNHVDGRSIGLAYFRQRGFRDDIIEKFQLGYCTESHDAMSQEALRKGYKKEFL 181 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETDI 238 + G+ D R DRF RV+FP+ G+V+ FGGRVL T KY+NSPE++I Sbjct: 182 VKTGICYETDDHRLRDRFWGRVIFPVHTLSGKVVAFGGRVLSTATKGVKVKYVNSPESEI 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK +LYG+Y A+Q +R +VEGY DV+++ Q GI VAS GT+ T I+L+ Sbjct: 242 YHKSNELYGIYFAKQAIVRQDRCFLVEGYTDVISMHQSGIENVVASSGTALTPGQIRLIH 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK E F Sbjct: 302 RFTNNITVLYDGDVAGIKASIRGIDMLL---EEGMNIKVCLLPDGDDPDSFARKHNSEEF 358 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR-IYLRQ 413 +A + E F + LM P RA L + + IS +P +R +Y+++ Sbjct: 359 QAFIHEHEKDFIRFKTDLLMEDAG-RDPIKRAELISNIVRSISVIPEAIIRDVYIKE 414 >UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUG2_9FIRM Length = 600 Score = 254 bits (648), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 141/395 (35%), Positives = 211/395 (53%), Gaps = 7/395 (1%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN++L+R DIVD+I + LKK+G N+ ACCPFH+EKTPSF VN EKQ YHCFGCG GN Sbjct: 2 INEVLSRNDIVDVIGSYASLKKKGSNYEACCPFHHEKTPSFKVNREKQMYHCFGCGVGGN 61 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M Y+ L F E VE LA +++P ++ S + + L ++ ++ Sbjct: 62 VFTFVMEYENLNFPEAVERLAERAGIQLPEKSMSAQERSREQYKIALKEMNKTAAAYFHY 121 Query: 130 SLQQ-PVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 L+ A +Y + RGL+ E I RFA+G+A D++ + + L ++G+ Sbjct: 122 ILKHGQRGEKAYEYFRDTRGLTDETINRFALGYADIYRDDLYRYLKNKGYTDEQLKNSGL 181 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + ++ D+F R M PI D G+VI FGGRVLG+ PKY+N+ +T +F K L+ Sbjct: 182 VDITEKDGGVDKFWNRAMIPILDINGKVIAFGGRVLGDGKPKYINTSDTAVFDKSHTLFA 241 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 + A++ + + EGYMDV+++ Q G + AVASLGT+ T H ++ R + V Sbjct: 242 MNIARR--SRRKGFICCEGYMDVISMHQAGFDNAVASLGTAFTFGHANIIKRYADEVYLA 299 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG A + + G R + + +DPD +R G EAFE R+++A Sbjct: 300 YDSDGAGVAATKKVIAILREV---GVGARVINMRPYKDPDEFIRNLGSEAFEDRIKKAES 356 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 FL + D S P R + IS + Sbjct: 357 GMMFLARIYSEEYDQSDPGERTKFQNQVAKEISYI 391 >UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_LACF3 Length = 631 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 144/370 (38%), Positives = 215/370 (58%), Gaps = 13/370 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +IPR I+ L + DI D+I ++LKKQGKN CPFH + TPSF+VN EKQ+++CF Sbjct: 3 QIPRETIDQLRNQVDIADVISQDIQLKKQGKNLMGHCPFHEDATPSFSVNEEKQYFYCFS 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G+ +L L F+E VE++A +++P E+ +GPS LY+L + Sbjct: 63 CHRSGDVFSYLEQAHDLSFMEAVEQVATTAGVDLPRES-NGPSGESASPNTPLYRLHEEA 121 Query: 124 NTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPP-GWDNVLKRFGGNPENRQS 181 + Y L VA A YL KRG+S E+I +F +GFAP G +++L ++ Sbjct: 122 SRLYHHVLVNTVAGQPALNYLTKRGMSRELIGQFNLGFAPARGEEDLLVKYFTQKGIDYQ 181 Query: 182 LIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN----DTPKYLNSPET 236 L+ A L T DQ G+ +DRF +RV++PI++ G+ I F GR+L + PKYLNSPET Sbjct: 182 LMRASGLFTEDQTGQLHDRFFDRVIYPIKNANGQPIAFSGRLLTKKATENAPKYLNSPET 241 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+K R L+ L +A++ + L + EG+MDV++ G+ +AS+GTS T + + + Sbjct: 242 PIFNKRRTLFNLDQAKKAARKEGHLTLFEGFMDVISAFGAGVRSGIASMGTSFTDEQVAV 301 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALET-ALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 + R T+ + CYDGD AG++A RAL A +T LR + LP G DPD V+ G+ Sbjct: 302 IARTTDKLTICYDGDAAGQNAINRALTMLAASRLT----LRVVQLPAGMDPDEYVQANGQ 357 Query: 356 EAFEARMEQA 365 F+ + A Sbjct: 358 AKFQEYLAHA 367 >UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW33_CHLT3 Length = 642 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 152/434 (35%), Positives = 232/434 (53%), Gaps = 30/434 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I+++ DIVD++ V+L++ G NF A PF +EKTPSF V+ EKQ Y CF Sbjct: 2 RIPEEKIDEIRRNLDIVDVVSDYVQLRRAGSNFKALSPFTSEKTPSFIVSPEKQIYKCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ---------RQ 114 G GN F+M +K+ F++ V+ LA AG ++ ERH + Sbjct: 62 TGKGGNVFTFVMEMEKIGFIDAVKMLAP--------RAGVSLAEFERHSPDAAAPSDPNE 113 Query: 115 TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 Y + F+ ++ P + Y +RG+ E I+ F +G+A WD + Sbjct: 114 EYYNTLTWSAKFFHSAMNLPEGKTCYDYFRERGILPETISAFGLGYAFDDWDKLHHAAQK 173 Query: 175 NPENRQSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYL 231 + + + L + G++ ++G + YD FR R MFPI G+V+GFGGR+L D PKY+ Sbjct: 174 DGISSEILSELGLIKYTEKGQKYYDAFRARAMFPIFSPGGKVVGFGGRILTGQKDAPKYI 233 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPE+ I+ K + L+ + A+ + ++VEGYMDV++L Q GI AVAS GTS T Sbjct: 234 NSPESKIYEKSKILFAMNFAKDEIRRREEAILVEGYMDVISLHQVGIKNAVASSGTSLTT 293 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 + +LL R T N++ YDGD AG A R ++ + +G + LPDG DPD+ VR Sbjct: 294 EQARLLKRYTKNILFIYDGDAAGIKAMMRGIDVLI---EEGLHASVLTLPDGNDPDSFVR 350 Query: 352 KEGKEAFEARMEQAMPLSAFL-FNSLMPQVD--LSTPDGRARLSTLALPLISQVPGE-TL 407 +EGK+ F + ++ S+FL F + + D +P+ L +S++P E L Sbjct: 351 EEGKDTFLSFIKAHR--SSFLDFKLQVLENDGGFESPEATTESIRALLESLSKLPDELAL 408 Query: 408 RIYLRQELGNKLGI 421 +YL+ EL KL + Sbjct: 409 EMYLK-ELSQKLDV 421 >UniRef50_C1XJV8 DNA primase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJV8_MEIRU Length = 592 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 186/569 (32%), Positives = 282/569 (49%), Gaps = 39/569 (6%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHG 68 I + +R I +L+ V LK GK + CPFH EKTPSF V+ +K +CFGC G Sbjct: 9 IELIRSRMPIRELVGRYVALKPSGKGVWKGLCPFHQEKTPSFQVSEDKGLCYCFGCKNGG 68 Query: 69 NAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQ 128 + FL + + F E +E LA +E+P G R+ Q+++ +++ Sbjct: 69 DIFAFLQKIEGIGFREALERLAQETGVELPQFKGRSSG------RKEALQILELTQAYFR 122 Query: 129 QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGML 188 +L + SA +YL++RGL+ I RF +G+AP WD +++ G+ + Q ++AG+L Sbjct: 123 ANL----SGSAERYLQERGLNPASIERFGLGYAPKSWDGLIRHLQGHGVDPQEAVEAGVL 178 Query: 189 VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGRQLYG 247 V + GR +DRFR RV FP+ D GR++ F R L +D PKYLNSPET +F K + LYG Sbjct: 179 VERE-GRYFDRFRHRVTFPVLDPMGRIVAFTARALEKDDNPKYLNSPETALFKKSQLLYG 237 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA-TNNVIC 306 +A+ E R +VVEG DV+AL Q G AVA LG+S + + LL RA + Sbjct: 238 YPQARSTIRERGRAVVVEGLFDVIALHQMGFTEAVAVLGSSLSGEQAHLLRRADAAELYL 297 Query: 307 CYDGDRAGRDAAWRA--LETALPYMTDGRQLRFMFLPDGEDP-DTLVRKEGKEAFEARME 363 +D D AGR A ++ LE A ++ + L DG+DP D L+ +GKE FE +E Sbjct: 298 AFDADEAGRKATLQSLNLEIARSFVVYA-----VLLEDGKDPGDLLLLPDGKERFEVALE 352 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRAR-LSTLALPLISQVPGETLRIYLRQELGNKLGI- 421 A+P + F + +DL P+ + + L L LIS P + + L+ ++ + L + Sbjct: 353 AALPEVEYRFEAAAAGLDLKRPEHKQKVLEALKPRLISSEPFDPVVEKLKAKVISALELS 412 Query: 422 ---LDDSQLERLMPKAAES---------GVSRPVPQLKRTTMRI-LIGLLVQNPELATLV 468 L+D PK A S G++RP KR + +I LL PE L Sbjct: 413 PRALEDYLARARTPKRAASAAPDRTLGIGLARPDLTEKRLLRELDVIALLYSVPEEEFLQ 472 Query: 469 PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 L D P L E + S+ G ++L ++ A L + M D+ Sbjct: 473 WALYVEDHTWPPEGSLLAEFMQAARSEQG--KSRILRYFEQRGEGARLMDVLMKSPSFDQ 530 Query: 529 NIAEQTFTDSLNHMFDSLLELRQEELIAR 557 E +L + + ELR ++L A+ Sbjct: 531 QNLEAHLNVALARVREVYYELRLDKLKAQ 559 >UniRef50_C3RLQ3 DNA primase n=3 Tax=Bacteria RepID=C3RLQ3_9MOLU Length = 584 Score = 252 bits (643), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 134/392 (34%), Positives = 222/392 (56%), Gaps = 15/392 (3%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN++ DIVD+I + L+K+G+N+ A CPFH++ PS +++ E+Q + CF C GN Sbjct: 9 INEIRQSVDIVDVIGTYLPLEKKGRNYVAICPFHDDSHPSMSISPERQIFMCFVCHHGGN 68 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVP---FEAGSGPSQIERHQRQTLYQLMDGLNTF 126 FL +Y K+ ++E V+ +A + N+++ E+ P + + LY++ D N Sbjct: 69 VFTFLKDYLKIPYIEAVKMVANIGNVDISKYNLESRVKPVD---QKLEPLYRMHDEANKI 125 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y L +A A++YL R ++ E+I F IG+AP +LK F N+ S+ ++G Sbjct: 126 YNHYLNTKLAIQAKEYLNNRKITDEIIETFEIGYAPNNH-VLLKAFEKMNFNKVSMFESG 184 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFHKGRQ 244 +++ G YDRF +R+MFP+ D GRV+GF GR+ + KY+NSPE+ IF KG Sbjct: 185 LIIEASNG--YDRFTDRIMFPLHDASGRVVGFSGRIYKQSQNESKYMNSPESSIFIKGDT 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LY + ++ + +++ EG+MDV+AL + GI AVA +GT+ T H+ LL R + V Sbjct: 243 LYNYHRVGEEARQAGYIIITEGFMDVIALYKAGIKNAVAIMGTALTHGHLNLLKRLSKTV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 C DGD+AGR+A ++++ L + G ++ + LPD DPD ++ K G E A +++ Sbjct: 303 YLCLDGDQAGRNATIKSIDILL---SAGFIVKVVDLPDNLDPDEILDKRGIEELNAVIKR 359 Query: 365 AMPLSAFLFNSLMPQVDLST-PDGRARLSTLA 395 + F N ++ D ++ L T+A Sbjct: 360 PLSSLDFKMNYYYEMTNMDNYEDRKSYLETIA 391 >UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPY5_OCEIH Length = 604 Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 153/455 (33%), Positives = 227/455 (49%), Gaps = 7/455 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M +IP I + DIVD+I ++LKKQG+N+ CPFH EKTPSF+V+ EKQ +H Sbjct: 1 MTNQIPDEIIEQVKNANDIVDVIGEYIQLKKQGRNYFGLCPFHGEKTPSFSVSQEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FL D F E ++ LA +E+P + S + +Q L Sbjct: 61 CFGCGKGGNVFTFLKEIDSFTFYEALQFLAEKQGIELPQTSIKKESFLSEEDQQVL-TAN 119 Query: 121 DGLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D L Y L+ QYL+ RG+S E + F IG+AP D L+ ++ Sbjct: 120 DWLMKLYHHLLKYTKDGKEGYQYLKDRGISDEALEDFQIGYAPNIKDFTLEFLTKKGFSK 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDI 238 Q L+ G+L + DRFR RV+FPIR+ G+ +GF GR L + PKYLNSPE + Sbjct: 180 QLLVKNGILSAQNDHDVIDRFRGRVIFPIRNAIGKTVGFVGRALHDGVEPKYLNSPEGGL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ A++ + N +++ EG +DV++ Q G+ VA+LGT+ T +LL Sbjct: 240 FQKSKILFNFDLAKKHIRKENEVILFEGSVDVISAYQNGLKNVVATLGTALTESQAKLLN 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ CYDGD AG +AA++A + + G ++R + +DPD+ +R G EAF Sbjct: 300 RYVETVVLCYDGDDAGLNAAYKASQLL---RSVGCEIRIAKMDPSDDPDSFIRSNGMEAF 356 Query: 359 EAR-MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + R + + F +L R L +S + R Y QEL Sbjct: 357 QNRIIRTSDTYMTFYMRYFRRDYNLKVEGDRIAYIEKVLKELSMIESTLEREYYVQELHK 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR 452 + + +S + +L SR + R T + Sbjct: 417 EFNLSHESLMTQLQSYRNNQQNSRDNHRYNRYTNK 451 >UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6VQS6_LACPJ Length = 626 Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 155/420 (36%), Positives = 222/420 (52%), Gaps = 10/420 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP + + + +I D I V+LKK GKN CPFH E+TPSF+VN +KQ +H Sbjct: 1 MANRIPEEKVEQVRSAVNIADFIGQYVQLKKAGKNLFGLCPFHEERTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP--FEAGSGPSQIERHQRQTLYQ 118 CF CG GN F+M+ + L F E V ++A ++++P + A S P+ + Q+ L + Sbjct: 61 CFSCGRGGNVFSFIMDLENLSFPEAVVKVADFGHIDLPASYTAQSQPAAPKDQQQADLLK 120 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 L YQ L + A +YL +RGL E I F IG+AP +L F + Sbjct: 121 LYADSAKMYQHILVNTELGEPALKYLHERGLDDETIKTFGIGYAPANQ-LLLDFFKEHQT 179 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPE 235 + Q L +G+ + N G DRF +RV+FPI+D GRVI F GR+L + PKYLNSPE Sbjct: 180 DYQLLRQSGLFIENQAGDLRDRFVDRVLFPIKDASGRVIAFSGRILKKSPNEPKYLNSPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F+K L+ A+ + +++ EG+MDV+A + GI VAS+GTS T + I Sbjct: 240 TKLFNKRSVLFNFDLARGPIRQQKSVVLFEGFMDVIAAYRSGIQNGVASMGTSLTDEQIY 299 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 +L R T+ + CYD D G+ A RAL+ L L + +PDG DPD +R +G+ Sbjct: 300 MLERVTDTLYVCYDSDMPGQKATDRALK--LLGGNSRLNLGVIQMPDGMDPDEYLRAQGQ 357 Query: 356 EAFEARMEQAMPL-SAFLFNSLMPQVDL-STPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E F E +AF L ++L +TPD L + L +YL Q Sbjct: 358 EKFVQVFEDGKQTPTAFEMQYLKHDLNLQNTPDQLTYLQAVLQQLAQLSSSVEQDLYLNQ 417 >UniRef50_D1B615 DNA primase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B615_THEAS Length = 564 Score = 251 bits (641), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 152/430 (35%), Positives = 231/430 (53%), Gaps = 56/430 (13%) Query: 16 RTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLM 75 R DIVDL+ + + L+K+G+++ A CPFH+E+TPSFTV+ E+Q YHCFGCG G+ F+M Sbjct: 11 RIDIVDLVSSYIPLRKRGRSYVALCPFHSERTPSFTVSRERQTYHCFGCGKGGDIFSFVM 70 Query: 76 NYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPV 135 + L F E +E+LA M +++ SGP + R R L + + F++ +L Sbjct: 71 EMENLPFREALEKLAPMAGVQL----DSGPGR--RRSRDVLEEAL----RFFRDALASRE 120 Query: 136 ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGR 195 A YLE+R L + F IG+AP W + +R+ +++ G+LV +G Sbjct: 121 GAYAAAYLERRRLDRRALELFEIGWAPASWGALRDHLSSLGFSREEMLEVGLLVEGSKG- 179 Query: 196 SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDN 255 YDRFR RV+FP+R++ GR++GFGGR++ + KY+NSPE +F K + LY L A+ Sbjct: 180 PYDRFRGRVIFPLRNETGRLVGFGGRLVDGEGAKYVNSPEGPLFEKRKFLYLLNMAKHAI 239 Query: 256 AEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGR 315 E R+++VEGYMD + G + AVA LGTS T + ++ R + + C+D D AG+ Sbjct: 240 RERGRVILVEGYMDAIRCHLTGFSEAVACLGTSLTEEQCGVIARHADRCLICFDSDLAGQ 299 Query: 316 DAAWRALETALPYMTD--GRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLF 373 +A R + YM + G + + LP G+DPD L Sbjct: 300 EATIRGM-----YMLNRLGVDVEVVRLPRGKDPDEL------------------------ 330 Query: 374 NSLMPQVDLSTPDG-----RARLSTLALPLI-SQVPGETLRIYLRQELGNKLGILDDSQL 427 LS PDG RA STL LP+ ++V G + +L ++L L + L Sbjct: 331 --------LSQPDGASDFRRALESTLPLPVFHAEVKGGGGSLKETGDLLDQLATLSPAYL 382 Query: 428 ERLMPKAAES 437 +R MP+ AE+ Sbjct: 383 KRHMPRVAEA 392 >UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3X9_SALRD Length = 655 Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 143/410 (34%), Positives = 220/410 (53%), Gaps = 11/410 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++ D+V++ + V+LK+ G + CPFHNE TPSF+V+ ++ Y+CFGC Sbjct: 3 IPDEKIEEVRTAVDLVEVAEDYVQLKQSGSRYMGLCPFHNEDTPSFSVDPDQNLYYCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G+A F+ + + F+E+V LA + + +P E + ER L+ L Sbjct: 63 QNGGDAFKFVQEIEGVGFLESVRMLADRYGVPLPEEETDPDAANEREA--VLHALRFAAR 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY+Q Q A YL +RG + + I +F +G+AP WD +L +R++L Sbjct: 121 FFYRQLTQSDRGRPALDYLRRRGFTPQTIKQFGLGYAPDEWDALLTVAEEEQIDRETLEK 180 Query: 185 AGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG----NDTPKYLNSPETDIF 239 AG+++ ND YDR+R R++FPI G+V+ F GR+L D PKY+NSPET+++ Sbjct: 181 AGLIIERNDGSGYYDRYRGRIIFPIFSHIGKVLAFAGRILDPDDERDQPKYINSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYGL++A+Q + + +L+VEGY DV++L+Q G+ VAS GT+ T I L R Sbjct: 241 HKKEVLYGLHQAKQAIRKTDEVLLVEGYTDVISLSQAGVGNVVASSGTALTEQQIGTLDR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + YD D AG AA R +E L G + LP G DPD V++ G +AF Sbjct: 301 YAKRAVMLYDADEAGERAALRGMERVL---EAGLGAYAVELPAGNDPDEYVQEHGGDAFS 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 + E L +F + L TP+ R + + ++++P LR Sbjct: 358 DYVQEHRQDLPSFAYQRARRNGVLETPEDRVEVQREIIESVARIPDPNLR 407 >UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE Length = 675 Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 147/448 (32%), Positives = 237/448 (52%), Gaps = 14/448 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + I+ +L IV+++ V L+K+G N+ CPFHNEKTPSF+V+ K CF C Sbjct: 10 IDQATIDRILDVAQIVEVVSDFVTLRKRGVNYVGLCPFHNEKTPSFSVSPSKGLCKCFSC 69 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GNA+ F+M ++++ + E + LA +N+E+ + + + R++++ + + Sbjct: 70 GKGGNAVHFIMEHEQMSYPEALRYLAKKYNIEIKERELTNEEKEVQSNRESMFIVNNFAR 129 Query: 125 TFYQQSLQQPV--ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 ++Q L+ V + Y +RG ++I +F +GF+ G D + + ++ L Sbjct: 130 DYFQNILKNHVDGRSIGLAYFRQRGFRDDIIDKFQLGFSTEGRDALAQEALRKGFKQEFL 189 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT---PKYLNSPETDIF 239 + G+ D + DRF RVMFP+ G+V+ FGGRVL + KY+NSPE++I+ Sbjct: 190 VKTGLCYETDDHKLRDRFWGRVMFPVHTLSGKVVAFGGRVLSTENKKLAKYVNSPESEIY 249 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK +LYG+Y A+Q + +R +VEGY DV+++ Q G+ VAS GTS T I+L+ R Sbjct: 250 HKSNELYGIYFAKQAIVKQDRCFLVEGYTDVISMHQSGVENVVASSGTSLTPGQIRLIHR 309 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK F+ Sbjct: 310 FTNNITVLYDGDMAGIKASIRGIDMLLE---EGMNIKVCLLPDGDDPDSFARKHNATEFQ 366 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + E F LM P RA L + I+ +P +R +E G Sbjct: 367 NFIQEHETDFIRFKAQLLMEDAG-KDPMKRAELINDIVRSIAVIPEAIVRDVYIKECGQL 425 Query: 419 LGILDD---SQLERLMPKAAESGVSRPV 443 L I D S++ + AE G ++P+ Sbjct: 426 LRIEDKLLVSEVAKRRELQAEKG-NKPI 452 >UniRef50_C0ATB4 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0ATB4_9ENTR Length = 245 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/245 (53%), Positives = 173/245 (70%), Gaps = 1/245 (0%) Query: 338 MFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALP 397 MFLP+G+DPD+LVR+EGKE+FE RMEQA LS FLF+SL+PQVDLST +G +L +LA P Sbjct: 1 MFLPEGDDPDSLVRREGKESFEKRMEQAHSLSEFLFDSLVPQVDLSTQEGNGKLYSLARP 60 Query: 398 LISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKA-AESGVSRPVPQLKRTTMRILIG 456 LI ++P ETLR+YL +ELG+ G D Q++RL + +S +L+ T MRILI Sbjct: 61 LIDKIPSETLRLYLLRELGSLTGNPDIEQMDRLFGRTPVNHELSYQPTKLRTTPMRILIA 120 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 LL+QNPE + LVPPLE L K+ GL LF ELV+ C +QPGL TGQ++E YR L Sbjct: 121 LLIQNPEFSKLVPPLEGLSTEKIAGLSLFIELVSVCQAQPGLNTGQIIELYRENKFGKQL 180 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 EKL+MW+DI IAE+TFTD+L+H+F + ++ R LIA+ERT GL+ +ER E+ + Q Sbjct: 181 EKLAMWNDIDIDEIAEKTFTDTLDHIFLTAMDERLNTLIAKERTEGLTQDEREEVQLIIQ 240 Query: 577 ELAKK 581 KK Sbjct: 241 ARVKK 245 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae... 772 0.0 UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=... 689 0.0 UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=P... 680 0.0 UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO 660 0.0 UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1... 643 0.0 UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii... 638 0.0 UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS 628 e-178 UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3... 618 e-175 UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 1... 617 e-175 UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BN... 615 e-174 UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q... 608 e-172 UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0... 606 e-172 UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PR... 606 e-172 UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus Rep... 605 e-171 UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium... 603 e-171 UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID... 602 e-170 UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7... 599 e-170 UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A... 597 e-169 UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y... 596 e-169 UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC22... 590 e-167 UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN 588 e-166 UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC 586 e-166 UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix ... 575 e-162 UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK 574 e-162 UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens ... 573 e-162 UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P... 570 e-161 UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB 567 e-160 UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia ... 567 e-160 UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=... 566 e-159 UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6W... 559 e-157 UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 R... 558 e-157 UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AH... 555 e-156 UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q... 554 e-156 UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF 554 e-156 UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47... 549 e-154 UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA... 545 e-153 UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7... 543 e-153 UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL... 542 e-152 UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS 539 e-152 UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J4... 539 e-151 UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV 534 e-150 UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA 533 e-150 UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7... 531 e-149 UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans ... 528 e-148 UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS 527 e-148 UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bac... 526 e-148 UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis ... 524 e-147 UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum Rep... 523 e-147 UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivora... 517 e-145 UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PR... 516 e-145 UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC ... 515 e-144 UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 Re... 510 e-143 UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK 510 e-143 UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxida... 508 e-142 UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DS... 508 e-142 UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_... 507 e-142 UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199... 507 e-142 UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 10... 507 e-142 UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius... 507 e-142 UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus ... 507 e-142 UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_B... 506 e-141 UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanu... 505 e-141 UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20... 505 e-141 UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6T... 504 e-141 UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI... 504 e-141 UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H... 504 e-141 UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3... 504 e-141 UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitat... 503 e-141 UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT 501 e-140 UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans D... 501 e-140 UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd... 501 e-140 UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 Rep... 501 e-140 UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 500 e-140 UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168... 499 e-140 UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU 499 e-139 UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_E... 498 e-139 UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaer... 498 e-139 UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K... 498 e-139 UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM ... 497 e-139 UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_... 497 e-139 UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 Re... 497 e-139 UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum... 496 e-139 UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG... 496 e-139 UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB 496 e-139 UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin4... 496 e-138 UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H... 495 e-138 UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID... 495 e-138 UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN 495 e-138 UniRef50_O52200 DNA primase n=45 Tax=Actinomycetales RepID=PRIM_... 495 e-138 UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans... 494 e-138 UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM... 494 e-138 UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E... 494 e-138 UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE 493 e-138 UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QC... 493 e-138 UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 492 e-137 UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 492 e-137 UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9... 492 e-137 UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4... 491 e-137 UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID... 491 e-137 UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WE... 490 e-137 UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8... 490 e-137 UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spin... 489 e-136 UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID... 489 e-136 UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 1261... 488 e-136 UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID... 488 e-136 UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATC... 487 e-136 UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei19... 485 e-135 UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 425... 484 e-135 UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistip... 484 e-135 UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9X... 483 e-135 UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34... 483 e-135 UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903... 483 e-134 UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostri... 482 e-134 UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens... 482 e-134 UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_... 482 e-134 UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 1... 481 e-134 UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense... 481 e-134 UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleoca... 481 e-134 UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC ... 481 e-134 UniRef50_B5JTS5 DNA primase n=1 Tax=gamma proteobacterium HTCC50... 481 e-134 UniRef50_B1HTI3 DNA primase n=5 Tax=Bacteria RepID=B1HTI3_LYSSC 481 e-134 UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO 480 e-134 UniRef50_A7BE18 Putative uncharacterized protein n=1 Tax=Actinom... 479 e-134 UniRef50_A5CX96 DNA primase n=2 Tax=sulfur-oxidizing symbionts R... 479 e-133 UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315... 479 e-133 UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR... 478 e-133 UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM 478 e-133 UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO 478 e-133 UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 478 e-133 UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC... 478 e-133 UniRef50_Q058D3 DNA primase n=1 Tax=Buchnera aphidicola str. Cc ... 477 e-133 UniRef50_B0RBC7 DNA primase n=5 Tax=Actinobacteria (class) RepID... 477 e-133 UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1... 477 e-133 UniRef50_C7H3D7 DNA primase n=2 Tax=Faecalibacterium prausnitzii... 477 e-133 UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM... 477 e-133 UniRef50_B9R233 DNA primase catalytic core, N-terminal domain fa... 476 e-133 UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15... 476 e-132 UniRef50_C7MD61 DNA primase n=6 Tax=Actinomycetales RepID=C7MD61... 476 e-132 UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM... 476 e-132 UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD 475 e-132 UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coproco... 475 e-132 UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5... 474 e-132 UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB... 474 e-132 UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9... 474 e-132 UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE 474 e-132 UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_T... 473 e-132 UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenen... 473 e-132 UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldar... 473 e-131 UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_... 473 e-131 UniRef50_B0PFC1 Putative uncharacterized protein n=1 Tax=Anaerot... 473 e-131 UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp.... 472 e-131 UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_... 471 e-131 UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella che... 470 e-131 UniRef50_C4L400 DNA primase n=2 Tax=Exiguobacterium RepID=C4L400... 470 e-131 UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 Re... 470 e-131 UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQ... 470 e-131 UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DS... 469 e-130 UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PR... 469 e-130 UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 ... 469 e-130 UniRef50_C7NH61 DNA primase n=2 Tax=Micrococcineae RepID=C7NH61_... 469 e-130 UniRef50_D1BUG1 DNA primase n=3 Tax=Micrococcineae RepID=D1BUG1_... 469 e-130 UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 512... 468 e-130 UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis Rep... 468 e-130 UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855... 468 e-130 UniRef50_Q11WL0 DNA primase n=1 Tax=Cytophaga hutchinsonii ATCC ... 467 e-130 UniRef50_A7NG02 DNA primase n=2 Tax=Roseiflexus RepID=A7NG02_ROSCS 467 e-130 UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9I... 467 e-130 UniRef50_Q6F8J4 DNA primase n=16 Tax=Acinetobacter RepID=Q6F8J4_... 467 e-130 UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH 467 e-130 UniRef50_C6CTW0 DNA primase n=4 Tax=Bacillales RepID=C6CTW0_PAESJ 467 e-130 UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans P... 467 e-130 UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 Re... 466 e-130 UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR... 466 e-130 UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9... 466 e-129 UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp.... 466 e-129 UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collins... 466 e-129 UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostri... 466 e-129 UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE 466 e-129 UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii C... 465 e-129 UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 ... 465 e-129 UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 465 e-129 UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 464 e-129 UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q... 464 e-129 UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA 463 e-129 UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium AT... 463 e-129 UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 ... 463 e-128 UniRef50_A6LD21 DNA primase n=12 Tax=Bacteroidales RepID=A6LD21_... 463 e-128 UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candida... 462 e-128 UniRef50_C9PY41 DNA primase n=8 Tax=Prevotella RepID=C9PY41_9BACT 462 e-128 UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5... 461 e-128 UniRef50_C8XHB5 DNA primase n=1 Tax=Nakamurella multipartita DSM... 461 e-128 UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_... 460 e-128 UniRef50_B0SHG4 DNA primase n=2 Tax=Leptospira biflexa serovar P... 460 e-128 UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 460 e-128 UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum D... 460 e-128 UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bactero... 460 e-128 UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteri... 460 e-128 UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_S... 459 e-127 UniRef50_D2NNW9 DNA primase n=2 Tax=Rothia mucilaginosa RepID=D2... 459 e-127 UniRef50_D1N3F9 DNA primase n=1 Tax=Victivallis vadensis ATCC BA... 458 e-127 UniRef50_C1XJV8 DNA primase n=1 Tax=Meiothermus ruber DSM 1279 R... 458 e-127 UniRef50_UPI00016C0A50 DNA primase n=1 Tax=Epulopiscium sp. 'N.t... 457 e-127 UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC... 457 e-127 UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK 457 e-127 UniRef50_Q1IIK3 DNA primase n=1 Tax=Candidatus Koribacter versat... 457 e-127 UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asia... 457 e-127 UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1... 456 e-127 UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum... 456 e-126 UniRef50_D1XXM0 DNA primase n=1 Tax=Prevotella bivia JCVIHMP010 ... 456 e-126 UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E... 456 e-126 UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus ... 455 e-126 UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6V... 455 e-126 UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans... 455 e-126 UniRef50_Q1GEP2 DNA primase n=17 Tax=Rhodobacterales RepID=Q1GEP... 455 e-126 UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A... 455 e-126 UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS170... 455 e-126 UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT... 455 e-126 UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowst... 455 e-126 UniRef50_UPI0001C377B6 DNA primase n=1 Tax=Ruminococcus flavefac... 455 e-126 UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonel... 454 e-126 UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-... 453 e-126 UniRef50_C2G0R6 DNA primase n=2 Tax=Sphingobacterium spiritivoru... 453 e-126 UniRef50_A6WDD6 DNA primase n=2 Tax=Actinomycetales RepID=A6WDD6... 453 e-125 UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC... 453 e-125 UniRef50_A5FIZ9 DNA primase n=15 Tax=Bacteroidetes RepID=A5FIZ9_... 452 e-125 UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC21... 452 e-125 UniRef50_C3JBY0 Putative DNA primase n=2 Tax=Bacteria RepID=C3JB... 452 e-125 UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_... 451 e-125 UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 ... 450 e-125 UniRef50_C5RBJ6 DNA primase n=1 Tax=Weissella paramesenteroides ... 450 e-125 UniRef50_B8G2V7 DNA primase n=3 Tax=Chloroflexus RepID=B8G2V7_CHLAD 449 e-124 UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DS... 449 e-124 UniRef50_C6XRH9 DNA primase n=1 Tax=Hirschia baltica ATCC 49814 ... 449 e-124 UniRef50_B1ZCZ4 DNA primase n=1 Tax=Methylobacterium populi BJ00... 449 e-124 UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodism... 449 e-124 UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DS... 448 e-124 UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_C... 447 e-124 UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_L... 447 e-124 UniRef50_Q83GI9 DNA primase n=2 Tax=Tropheryma whipplei RepID=Q8... 447 e-124 UniRef50_C1F7T6 DNA primase n=1 Tax=Acidobacterium capsulatum AT... 447 e-124 UniRef50_C6X675 DNA primase n=2 Tax=Flavobacteriaceae RepID=C6X6... 446 e-124 UniRef50_C7PKU5 DNA primase n=1 Tax=Chitinophaga pinensis DSM 25... 446 e-123 UniRef50_D0LP35 DNA primase n=1 Tax=Haliangium ochraceum DSM 143... 446 e-123 UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 446 e-123 UniRef50_A9B4A9 DNA primase n=1 Tax=Herpetosiphon aurantiacus AT... 445 e-123 UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rh... 445 e-123 UniRef50_C0BKP6 DNA primase n=3 Tax=Flavobacteria RepID=C0BKP6_9... 445 e-123 UniRef50_Q6A956 DNA primase n=3 Tax=Propionibacterium acnes RepI... 445 e-123 UniRef50_A0M544 DNA primase n=3 Tax=Flavobacteria RepID=A0M544_G... 445 e-123 UniRef50_C7XEU1 Predicted protein n=1 Tax=Parabacteroides sp. D1... 445 e-123 Sequences not found previously or not previously below threshold: >UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae RepID=C5BH75_EDWI9 Length = 599 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 422/581 (72%), Positives = 492/581 (84%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIPRVFINDLLARTDIV+L+DARVKLKKQGKN+HACCPFH+EKTPSFTVN +KQFYH Sbjct: 18 MAGRIPRVFINDLLARTDIVELVDARVKLKKQGKNYHACCPFHSEKTPSFTVNADKQFYH 77 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAIDFLMNYD+LEFVE++EELA M LEVP+E+GSGPSQ+ERHQRQ LYQLM Sbjct: 78 CFGCGAHGNAIDFLMNYDRLEFVESIEELATMAGLEVPYESGSGPSQMERHQRQNLYQLM 137 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 DGL +YQQSL+QP AT A+QYL RG+S ++ FAIG+AP GWDN LKRFG + R Sbjct: 138 DGLCGYYQQSLRQPGATQAQQYLTGRGMSQAIMDSFAIGYAPQGWDNALKRFGRDAGGRT 197 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 +L DAGMLV N+ GRSYDRFR+R+M PIRDKRGRVI FGGRVLGN TPKYLNSPET+IFH Sbjct: 198 ALNDAGMLVNNENGRSYDRFRDRIMIPIRDKRGRVIAFGGRVLGNGTPKYLNSPETEIFH 257 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGRQL+GLYEA Q A+P RLLVVEGYMDV+ALAQYG+NYAVASLGTSTTA+HIQLLFR Sbjct: 258 KGRQLFGLYEALQHAAQPERLLVVEGYMDVIALAQYGVNYAVASLGTSTTAEHIQLLFRH 317 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+CCYDGD AGR+AAWRALETALPY++DGRQL+FMFLP+GEDPDTL+RKEG EAFE Sbjct: 318 TDSVVCCYDGDNAGREAAWRALETALPYLSDGRQLKFMFLPEGEDPDTLIRKEGAEAFER 377 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 RM A PLS FLF+SL+PQVDLSTPDGR +LS LALPLI QVPGETLR+YLRQ LG KLG Sbjct: 378 RMNDAHPLSTFLFDSLLPQVDLSTPDGRTKLSALALPLIGQVPGETLRLYLRQSLGQKLG 437 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 ILDDSQLE+L+P+ +E+ + P+LK TTMRILI LLVQNP LA VP L+ L ++ LP Sbjct: 438 ILDDSQLEKLLPRRSEAVKNYQPPRLKPTTMRILIALLVQNPALAAEVPTLDGLHQHPLP 497 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 GL LF ELV TCL+QPGLTTGQLLE YR A+ LE L+ W+ + + + +TF D+L Sbjct: 498 GLPLFIELVETCLAQPGLTTGQLLELYRDNKYASQLETLATWNHMIIEPMVLETFVDTLG 557 Query: 541 HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++D++LE R E+LIAR RT GL+ ER E+ +LN+ LAKK Sbjct: 558 SLYDAVLEQRLEQLIARARTDGLTPAEREEVRSLNEALAKK 598 >UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=PRIM_PASMU Length = 582 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 331/583 (56%), Positives = 430/583 (73%), Gaps = 4/583 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLLA+TDIV+L+++RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRTFIDDLLAKTDIVELVNSRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQ 118 CFGCGAHGNAI FLM YDKLEFVE +EELA M LE+P E QI ++ LY+ Sbjct: 61 CFGCGAHGNAISFLMEYDKLEFVEAIEELAGMLGLEIPRENKPHFHGKQINLQTKRNLYE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 LM + FYQQ L Q + A+ YL++RGLS EVI+RF IGF P +D VL+RFG E+ Sbjct: 121 LMQEIAQFYQQQLAQHI--PAQSYLQQRGLSPEVISRFQIGFVPNSFDAVLQRFGQQKED 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +Q L D GML ++QG+ YDRFR R+MFPIRD+RG+ I FGGRVLG++ PKYLNSPE+ Sbjct: 179 QQKLFDLGMLSRSEQGKIYDRFRHRIMFPIRDRRGKTIAFGGRVLGDEKPKYLNSPESAT 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HKG +LYGLYEA Q N P LLVVEGYMDVVALAQ+G++YAVASLGT+TTA+ IQLLF Sbjct: 239 YHKGNELYGLYEALQANESPEMLLVVEGYMDVVALAQFGVDYAVASLGTATTAEQIQLLF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R+T ICCYDGDRAGR+AAWRA E ALPY+ DGRQL+F+FLPDGEDPD+ +R+ GK +F Sbjct: 299 RSTEQAICCYDGDRAGREAAWRAFENALPYLEDGRQLKFVFLPDGEDPDSFIRQHGKASF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E M++A+ LS FLF SL PQVD S+ +G+ +L+ LA+PLI ++PG+ LR+ LR L K Sbjct: 359 EQYMQKALSLSEFLFTSLAPQVDFSSKEGKTKLAALAVPLIKKIPGDMLRLSLRNTLAQK 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 LGILD +QLE L+P +E ++ +KRT MR+LIGLL+QNPELA LVP L L Sbjct: 419 LGILDQAQLESLIPSYSEMKITASPQPVKRTPMRVLIGLLLQNPELAQLVPDLSPLRTLN 478 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 PGL L +L C + G+TTGQ+LE++R T ++ LE L+ W+ + + E+TF + Sbjct: 479 EPGLDLLEKLTALCQEKVGITTGQILEYWRDTEHSKALEILASWNHLVEDTQIEETFKST 538 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 L +++ L+E + LIA++R+ GL+ ER +L L + +K Sbjct: 539 LRYLYFQLIEHEIDLLIAKDRSEGLNMNERKKLTQLLVKKQQK 581 >UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=PRIM_HAEIN Length = 593 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 328/589 (55%), Positives = 420/589 (71%), Gaps = 10/589 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLL ++DIVD+I+ RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRPFIDDLLTKSDIVDVINTRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG---SGPSQIERHQRQTLY 117 CFGCGAHGNAI FLM+YDKLEF+E +EELAAM LE+P+E SG Q ++ LY Sbjct: 61 CFGCGAHGNAISFLMDYDKLEFIEAIEELAAMAGLEIPYEKRVNHSGKPQANYQTKRNLY 120 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +LM + TFYQ L P+ T A++YL++RGLS E+I RF IGF P D VL++FG N E Sbjct: 121 ELMQEIATFYQNQL--PLNTQAQEYLQQRGLSPEIIERFQIGFVPNAMDTVLRKFGVNRE 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 +Q LI+ GML ND+G YD+FR R+MFPIRDKRGR + FGGRVL ++ PKYLNSPET Sbjct: 179 EQQKLIELGMLSRNDRGNIYDKFRNRIMFPIRDKRGRTVAFGGRVLTDEKPKYLNSPETI 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +HKG++LYGLYEA Q N EP +LLVVEGYMDVVALAQ+G++YAVASLGTSTT++ IQL+ Sbjct: 239 TYHKGKELYGLYEALQTNDEPKQLLVVEGYMDVVALAQFGVDYAVASLGTSTTSEQIQLI 298 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R+T V+CCYDGDRAGRDAAWRALE ALPY+ DGRQL+F+FLPDGE+PDT +R+ GKE Sbjct: 299 LRSTEQVVCCYDGDRAGRDAAWRALENALPYLEDGRQLKFIFLPDGEEPDTYIRQYGKEK 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +E A LS F+F L PQVD ST +GR +L LA PLI Q+PGE LR+ LR L Sbjct: 359 FEEYIESAQSLSEFMFAHLSPQVDFSTKEGRGKLVALAAPLIHQIPGEMLRLSLRNMLAQ 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPV---PQLKRTTMRILIGLLVQNPELATLVPPLENL 474 KLGI D +QLE L+PK E ++ ++K+T MR++I LL+QNPEL + Sbjct: 419 KLGIFDQTQLENLIPKKLEQANTQQKVTHNKIKKTPMRMVISLLMQNPELVKRMSESGVQ 478 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 G + +L C + G+TTGQ+LE++R T+ + LE L+ WD + D++ Sbjct: 479 ALRAEAGFEILEKLTALCRQREGITTGQILEYFRNTSYSNPLEILATWDHLLDESDIINA 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN--QELAKK 581 F+ + + +E E LIA+ERT GL+NEE+ L L +E KK Sbjct: 539 FSQNYRRLNIQAIERDIEMLIAKERTEGLTNEEKTVLVHLLAGKEQQKK 587 >UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO Length = 581 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 284/583 (48%), Positives = 380/583 (65%), Gaps = 7/583 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIV+++D+RV LKK G+N ACCPFHNEKTPSFTV+ +KQFYH Sbjct: 1 MAGLIPKSFIHDLLERADIVEIVDSRVPLKKAGRNHQACCPFHNEKTPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL--YQ 118 CFGCG HGNAIDFLM +D L F + VEELA + +EVP E P ++ Q+Q + Sbjct: 61 CFGCGEHGNAIDFLMEFDGLNFPDAVEELAGIMGVEVPREQPENPQLAQKKQQQMQDDSE 120 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 LM F+Q L + YL+ RGLS E + RF IG+AP WD +L FG + Sbjct: 121 LMSKTARFFQHQLKHHENSNRVIDYLKGRGLSGETVKRFQIGYAPDAWDGLLSTFGSSAP 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 RQ L++ ++ N++GR YD FR+RVMFPI D+RGRV+GFGGR++ D PKYLNSPET Sbjct: 181 QRQQLLELKLINRNEKGRHYDFFRDRVMFPIHDRRGRVVGFGGRIIDGDGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG +LYG + QQ +P ++ +VEGYMDVVAL++ GI+YAVASLGT+TT++ +Q L Sbjct: 241 LFHKGSELYGYWHMQQAVRKPEQVCIVEGYMDVVALSEAGIHYAVASLGTATTSEQLQRL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR + ++CCYDGDRAGRDAAWRALE ALP + DG + F+FLP+GEDPD++VR+ G EA Sbjct: 301 FRTSGRIVCCYDGDRAGRDAAWRALENALPLLRDGLDMAFLFLPEGEDPDSVVREHGAEA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +++A P + + F L +D+S+ GR++L +A PLI +V E R L Q L Sbjct: 361 FERELKKATPFTEYFFEHLQADIDVSSDAGRSQLLNIAKPLIEKVASEYYRDTLMQRLAE 420 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 KL + SQLER K SRP +K T +R I LL+Q P+LA VP E L E Sbjct: 421 KL-RRETSQLERQFEKPQRQ--SRPKESVKMTPLRKAIALLLQYPQLAQSVPVREELREL 477 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ G+ L L C ++ +TT Q+LE +R T L+KL++W D++ EQ F D Sbjct: 478 QVSGIDLLIALHKQC-AERQMTTAQVLEGWRDTEYYQPLQKLALWQHQLDEDNVEQEFND 536 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 ++ D E R L+ +E+ L+ ER E TL Q L+K Sbjct: 537 IFIYLIDQYFEQRANALLKKEQEGALTRVERQEYQTLIQYLSK 579 >UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1DIY5_AZOVD Length = 638 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 277/625 (44%), Positives = 381/625 (60%), Gaps = 49/625 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIV++I +RV+LKK G+N+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQGFIDDLLNRTDIVEVIGSRVQLKKTGRNYSACCPFHQEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D LEF + VEELA LEVP E GP Q + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDHLEFPQAVEELARRAGLEVPREERGGPHQPRQSADSPLYPLL 120 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +Y+Q+L+ P A YL+ RGLS + FA+GFAPPGWDN+LK GG+ + Sbjct: 121 ATAADYYRQALKSHPARQVAVDYLKGRGLSGVIARDFALGFAPPGWDNLLKHLGGDALQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++I+AG+L+ N + GR YDRFR+RV+FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIEAGLLIENAETGRRYDRFRDRVIFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA++ N + + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARRHNRDLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR AAWRALE LP + DGR+ RF+FLP+GEDPD+LVR EG+EAF Sbjct: 301 RLVPSVLFCFDGDQAGRKAAWRALEATLPSLQDGRRARFLFLPEGEDPDSLVRAEGREAF 360 Query: 359 EARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+E QA PL+ + F L + D T +G+A L+TLA PLI ++PG LR +RQ L Sbjct: 361 LARLEQQARPLADYFFRQLTEEADPGTLEGKAHLATLAAPLIEKIPGANLRALMRQRLAE 420 Query: 418 KLGI------------------------------LDDSQLERLMPKAAESGV-------- 439 G+ L + + A + G Sbjct: 421 ITGLTGTSPNSPAASPVPRVEDAHYYQADPGYADLIEPERSAFGRTAQDKGQWKGRSGYR 480 Query: 440 -------SRPVPQLKRTTMRI-LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNT 491 RP + + + L+Q+P+LA V + + P L L+ Sbjct: 481 KGRDDFAPRPRTAVSVEPPNLSALRTLLQHPQLAQKVADASHFASEEDPYAQLLVALLEA 540 Query: 492 CLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQ 551 P ++ QL+ + GT L L+ + + + EQ F D++N + E Sbjct: 541 LQKNPRSSSLQLIARWHGTEQGRLLRALAEKEWLISTDNLEQQFFDTINTLAARQRERGI 600 Query: 552 EELIARERTHGLSNEERLELWTLNQ 576 E+L+ + R LS EE++ L L Sbjct: 601 EQLLRKARQGELSAEEKIRLRDLLS 625 >UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC827 Length = 592 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 288/591 (48%), Positives = 406/591 (68%), Gaps = 11/591 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IPR FI+DLL+RTD+V+++D+RVKLKK GKN+ ACCPFHNEK+PSFTV+ +KQFYH Sbjct: 1 MAGKIPRDFIDDLLSRTDVVEVVDSRVKLKKAGKNYQACCPFHNEKSPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQ 118 CFGCGAHGNAI F+M +D+LEFVE +EELA H LEVP E GS P S+ ++ Q+Q Y Sbjct: 61 CFGCGAHGNAISFIMEFDRLEFVEAIEELARYHGLEVPREKGSRPAMSEEKKQQQQDDYA 120 Query: 119 LMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +M+ + F+Q L+Q + A YL+ RGLS +++ ++ IG+AP WD +L FG + + Sbjct: 121 VMEQVARFFQHQLRQNGNSKKAIDYLKNRGLSGDIVKQWEIGYAPDSWDALLNTFGKDQQ 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + L+D ++ NDQGR+YD FR+R+MFPIRDKRGRV+GFGGRVL + PKYLNSPET Sbjct: 181 RIKQLVDLKLVNKNDQGRTYDFFRDRIMFPIRDKRGRVVGFGGRVLDDGGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IFHKG +L+G Y A+Q N + +++VEGYMDVVAL+Q+ IN A A+LGT+TT +HIQ+L Sbjct: 241 IFHKGSELFGFYSARQKNRSLDTVVIVEGYMDVVALSQFDINIATAALGTATTPEHIQML 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 RAT++++CCYDGDRAGR+AAWRALE ALP + DG ++ F+FLPDGEDPDT+VR+ GK+A Sbjct: 301 VRATSHIVCCYDGDRAGREAAWRALENALPALKDGVRISFLFLPDGEDPDTMVRQVGKDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F ++ AMPLS F F +L+ ++ TP+G+ L A+PLI G+ + L +EL Sbjct: 361 FMEMLDDAMPLSRFFFENLLKTHNVGTPEGKIALKKAAMPLIESTLGDDQKQMLLEELAK 420 Query: 418 KLGILDDSQLERLMPKAAE------SGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP- 470 G D +L++ + KA + S V + K + +R+LI LL+ PELATL Sbjct: 421 HTGEFDRFKLQQDITKANQGSKQAYSPNRNQVNKPKLSPLRMLIRLLLDKPELATLCEDV 480 Query: 471 -LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 ++ + G+ L R++ + C+S P T QL+E++R +++T+ KL + + + Sbjct: 481 QIDIFAGSNAAGMDLLRDVHSYCVSHPQAKTAQLVENFRDHPHSSTIAKLLLQEHLVKDE 540 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 AE+ + DS + D + R E LI+R R L+ E+ EL L +E K Sbjct: 541 DAERVYNDSFARLLDGHFDSRIETLISRSRVQPLTQAEKQELNLLMRERQK 591 >UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS Length = 656 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 270/644 (41%), Positives = 382/644 (59%), Gaps = 63/644 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIVD++ +RV+LKK GKN+ ACCPFH EKTPSF+V+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D L+F + +E+LA +E+P E P + + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEIPREESGRPHKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY+Q+L+ P +A YL+ RGL+ E+ F +GFAPPGWDN+ K + + Sbjct: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++IDAG+LV N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA+++N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR+AAWRALE L + DGR+ RF+FLP+GEDPDTLVR EG +AF Sbjct: 301 RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360 Query: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+ Q A PL+ + F L + D + +G+A ++TLA PLI +VPG LR +RQ L Sbjct: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLLE 420 Query: 418 KLGILDD--SQLERLMPKAAESGVSRP-------------VPQLKRTTMR---------- 452 G+ + SQL P+ A PQ T + Sbjct: 421 ITGLSGEAVSQLAHSAPQDAPPAYDPGMDYDAMPDYSDFHQPQEAYTPQQAWAPKKPGAG 480 Query: 453 ---------------------------------ILIGL--LVQNPELATLVPPLENLDEN 477 LI L L+ +P+LA V ++ Sbjct: 481 GKKWDKKPWSKNGKRGDNDEAYAPRTPVAVEAPTLIALRTLIHHPQLAEKVESADHFANA 540 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 + L+ P L + QL+ + GT L+ L+ + + D + EQ F D Sbjct: 541 SNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLKALAEKEWLIDGDNLEQQFLD 600 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++ + +ELI R R LS EE++++ ++L K+ Sbjct: 601 TITRLSAGQHTQTLDELIKRARQPDLSAEEKIQIAKQMRDLLKQ 644 >UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3QBM0_SHELP Length = 601 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 290/583 (49%), Positives = 386/583 (66%), Gaps = 15/583 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IPR FIN+L+ARTDIVDLIDA+V LKK GKN ACCPFH+EK+PSFTV+ +KQFYH Sbjct: 27 MA--IPREFINELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYH 84 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAIDF+M YD+L+FV+ +EELA LEVP E G+G + E R LYQLM Sbjct: 85 CFGCGAHGNAIDFVMEYDRLDFVDAIEELAGRLGLEVPREQGTGKRRDEGLSRD-LYQLM 143 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + ++Q L Q YL RGLS EVI F IGFAP GWD +L R+ N + + Sbjct: 144 EEASRYFQSQLKQHTDKQKVLDYLAHRGLSDEVIEHFNIGFAPDGWDGLLGRYRQNQDAQ 203 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L+ AGM++ ND G+ YDRFR+R+MFPIRD+RGRVIGFGGRVLG+ TPKYLNSPET IF Sbjct: 204 DKLLTAGMVIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIF 263 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG +LYGLYE +Q + +P+++L+VEGYMDVVAL Q+G++YAVASLGTSTTAD QLL R Sbjct: 264 HKGYELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTTADQFQLLLR 323 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + VICCYDGD+AG +AAWRALETALP + G Q++FMFLP GEDPD+LVR+ GK AFE Sbjct: 324 SAKEVICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLVRQIGKPAFE 383 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A L FLF++L + + L+ A+ LI +V L+ L + L KL Sbjct: 384 QLIAEAKLLPEFLFDTLASRYGTD----KGTLAKQAMSLIEKVQDTVLQSLLLENLAYKL 439 Query: 420 GILDDSQLERLM---PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE 476 G+ +L+R + A + + + T +R+ I LLVQ+P L +P L Sbjct: 440 GMNSAEELQRKLGFKRIDANKPLQNKALKGRGTPLRLAIALLVQHPHLGNNLPVQPALKH 499 Query: 477 NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFT 536 K+ G+ L L++ ++ + + QLLE +RG + TL+KL+ W+ +Q F Sbjct: 500 IKMAGIDLLSLLLDRTRAE-KVNSAQLLEQFRGDDQLDTLKKLAQWEHQVADENLQQEFK 558 Query: 537 DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 +L + + +E R +EL ++ + EER++L L + Sbjct: 559 KALIWLNNQYIEQRYQELSLKQHH---TKEERMQLKKLIAVIQ 598 >UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6R1_CHRVI Length = 582 Score = 617 bits (1590), Expect = e-175, Method: Composition-based stats. Identities = 255/577 (44%), Positives = 357/577 (61%), Gaps = 10/577 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+P FI+ LLARTDIV+LI +R++L+K G+ F A CPFH+EKTPSF+V+ +KQFYH Sbjct: 1 MAGRLPPEFIDQLLARTDIVELIGSRLQLRKAGREFQARCPFHDEKTPSFSVSPDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM YD L F E VEELA LE+P G LY+LM Sbjct: 61 CFGCGAHGNAIGFLMEYDHLPFREAVEELAERAGLEIP---NDGTPMQAAPDHGPLYRLM 117 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +Y++ L+ P A A YL++RGL+ E+ A F +G+AP + VL +FG + R Sbjct: 118 EDAALYYRRQLREHPEAQRAVAYLKERGLTGEIAAHFGLGYAPARGNPVLAQFGRDTATR 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L G++ D G YD+FR+RV+FPIRD+RGRVIGFGGRVLG+ PKYLNSPET IF Sbjct: 178 TRLQTVGLVSEQD-GWPYDKFRDRVLFPIRDRRGRVIGFGGRVLGDGKPKYLNSPETPIF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGL+EAQQ N + L+VVEGY+DV+ALAQ GI AVA+LGT+TT +H+ L + Sbjct: 237 HKGRELYGLHEAQQANRTFDALIVVEGYLDVIALAQSGITNAVATLGTATTPEHLNQLLK 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ C+DGDRAGR AAW+ALETALP T + +RF+FL +G+DPDTLVR+EG E F Sbjct: 297 LAPDIVFCFDGDRAGRAAAWKALETALPLATGHQAIRFLFLSEGDDPDTLVRREGAEGFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + ++QA PLS FLF L +D +T DGRAR ++ P I ++P R L + L + Sbjct: 357 SGLKQAQPLSDFLFEHLSASMDTTTMDGRARFASQLQPYIDRLPAGFYRDLLIRRLADFT 416 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL-ENLDENK 478 G + + + +R + + + +I LL+ P+LA L ++ + Sbjct: 417 GAPAQALRPAVARR--RQPAARLAQPTRPSLVAQVIALLLDRPDLAPQALALNDDWRRST 474 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI--AEQTFT 536 G+ + +L++ P L+ +LLE +R + L++LS+ + D A T Sbjct: 475 QRGIDVLIQLLDILRQSPDLSKARLLERWREHPHFGYLQRLSVDPFLRDMTPEGAGAELT 534 Query: 537 DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 ++ + D + E +L+ + + EER L Sbjct: 535 GAIRRLSDEVREHEWRQLLNKRSPSEWTPEERARLAR 571 >UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BND8_XANC5 Length = 582 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 266/585 (45%), Positives = 374/585 (63%), Gaps = 11/585 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP FI++LLARTDIV+++ RV LK+QGK + A CPFH+E++ SFTV+ KQFYH Sbjct: 1 MA-RIPDAFIDELLARTDIVEVVGGRVPLKRQGKEYSARCPFHDERSASFTVSPTKQFYH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLMNYD+LEF++ V+ELA +++P E Q + R+ LY + Sbjct: 60 CFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMDIPRETQQRTPQQQDDSRE-LYSAL 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D F+Q+ L + AR YL+ RG+ + ARF IG+AP G+ + G + Sbjct: 119 DAATKFFQRQL--EGSERARDYLDGRGVDADNRARFQIGYAPDGYSALKDTLGTDARRMS 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG------NDTPKYLNSP 234 L AG+ ND+G YD+FR+RVMFPI D+RGRVI FGGR++G + PKYLNSP Sbjct: 177 VLERAGLFSKNDRGHVYDKFRDRVMFPIFDRRGRVIAFGGRIMGAPADGRDPGPKYLNSP 236 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +FHKGR+LYGL++ +Q N + RL+VVEGYMDVV+L Q+G+ AVA+LGT+TT +H Sbjct: 237 ETALFHKGRELYGLWQVRQANQKIERLIVVEGYMDVVSLFQFGVTQAVATLGTATTPEHA 296 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +LLFR +V C+DGD AGR A WRALE+ LP M DGRQ F+FLPDGEDPDT+VRKEG Sbjct: 297 ELLFRNAPDVYFCFDGDNAGRKAGWRALESVLPRMKDGRQAFFLFLPDGEDPDTIVRKEG 356 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +AF+ R++QA PLS F F+ + +++L T DG+ARL+ A PL++Q+P ++QE Sbjct: 357 AQAFDQRLKQATPLSQFFFDEMSREINLHTLDGKARLAERARPLLAQIPEGAFGDLMKQE 416 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 L G+ + ++ P+ P KR+ +R I +L+Q P LA + + + Sbjct: 417 LARLTGVGATASAQQSAPRLRLPARVG-APTQKRSLVRASIAILLQRPSLAMSLEGVHDF 475 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 +LPG+ L EL++ +P ++TG LLEH+ A L+KL+ + D++ Sbjct: 476 SGLRLPGIDLLMELLDLVRQRPEISTGALLEHFAERQELAALQKLAAQELPGDEHSWTLE 535 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 D + + LL R EEL A++R GL + ++ E+ L + LA Sbjct: 536 LHDVVAQLDKQLLRQRVEELQAKQRAQGLDDTDKYEMRELLKALA 580 >UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q3JF10_NITOC Length = 574 Score = 608 bits (1568), Expect = e-172, Method: Composition-based stats. Identities = 267/579 (46%), Positives = 363/579 (62%), Gaps = 10/579 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI++L+ARTDIV+LID+RV L+K N+ ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 3 MGERIPQEFIDELVARTDIVELIDSRVPLRKASHNYVACCPFHNEKTPSFTVSPQKQFYY 62 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC HG AI FLM +D+L F+E VEELA + VP S Q ++ Q LY+++ Sbjct: 63 CFGCSVHGTAIGFLMAFDRLSFIEAVEELAQRAGMMVP---QSSKQQDYYNRHQGLYEVL 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L+ + YL +RGLS +IA F +GFAPP W+ +L P + Sbjct: 120 ACAAEFYQQQLEASAYQGQVKAYLRERGLSGPIIAEFGLGFAPPRWNALLHY--TRPSLK 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG+ ++ + R YDRFR+R++FPI D RGRVIGFGGR+LG+ +PKYLNSPET +F Sbjct: 178 SYLQAAGLTISKGEDRYYDRFRDRLIFPIHDYRGRVIGFGGRLLGDGSPKYLNSPETALF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLY+ ++ +RLLVVEGYMDV+ALA++ I YAVA+LGT+TT+DH+ LFR Sbjct: 238 HKGRELYGLYQVRKSLHRCDRLLVVEGYMDVLALAEHKIRYAVATLGTATTSDHLTRLFR 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T VI C+DGDRAG AAWRALETALP ++ GRQ++FMFLP GEDPDT+VR EG+ AFE Sbjct: 298 ITPAVIFCFDGDRAGYQAAWRALETALPLLSQGRQVQFMFLPQGEDPDTMVRAEGQTAFE 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 AR+ +A+PLS FL N+L +V+LS+ DG ARL LA PL++++P + L L Sbjct: 358 ARLAEAVPLSDFLLNNLRQKVNLSSVDGCARLVELARPLLARIPPGVYQDMLLARLAELA 417 Query: 420 GILDDSQLERLMPKAAESGVS-RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 I + + L P + V R + Q + R + +L+Q P++ V +L + Sbjct: 418 QIEQTTLIRHLSPGKKPTAVPLRRLEQGAASPTRRAVAILLQRPKMIQWVDKNLSLRGLE 477 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 G L ++LV+ + P L T LLE +R + LE+L+ W+ + + Sbjct: 478 GAGAELLQKLVDLLQNNPHLNTAALLERWRDSEMGRYLEQLAGWELLLTDEDMVLELQAA 537 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 L + E R I L+ E+ EL L E Sbjct: 538 LERLQVQGAEQRI---ITLSNQPSLTGAEQRELLALLAE 573 >UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0A5N0_ALHEH Length = 617 Score = 606 bits (1564), Expect = e-172, Method: Composition-based stats. Identities = 268/595 (45%), Positives = 364/595 (61%), Gaps = 26/595 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP FI++LL RTDI +++ ARV+LKK G N CPFH+EKTPSFTV KQFYH Sbjct: 1 MSGRIPDEFIDELLHRTDITEVVGARVRLKKTGANLLGLCPFHSEKTPSFTVAPAKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM+Y++++F E VE LA +E+P A + P + LY ++ Sbjct: 61 CFGCGAHGTAIRFLMDYERMDFREAVEYLARQAGMELPAAAAAAPVP---DRHARLYHVL 117 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ++L+ P + A YL++RGLS ++ ARFA+GFAPPGWDN+LKR + Sbjct: 118 AEAAIYYQEALRRHPASAKAVDYLKRRGLSGDIAARFALGFAPPGWDNLLKRHRDR---Q 174 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L++AG+L+ D GR YDRFR+RVMFPIR++RG V+GFGGRVLG+ PKYLNSPET +F Sbjct: 175 ADLVEAGLLIERDGGRVYDRFRDRVMFPIRNRRGTVVGFGGRVLGDGEPKYLNSPETPVF 234 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLYEA Q P LLVVEGYMDVVALAQ+G+ AVA+LGT+ T D + LFR Sbjct: 235 HKGRELYGLYEAVQAQRNPPLLLVVEGYMDVVALAQHGVQGAVATLGTAVTPDQVSRLFR 294 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 AT+ V+ C+DGDRAGR AAWRA+E +LP M +GR + + LP+GEDPD+LVR EG EAF Sbjct: 295 ATDRVVFCFDGDRAGRQAAWRAVENSLPAMREGRSVEILLLPEGEDPDSLVRAEGAEAFL 354 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R+E + PL+ + L + L D RARL A+PL+ ++P R + ++L Sbjct: 355 RRLERETRPLAEYSLEELADGLRLDAVDDRARLVQKAVPLVRRLPVGIYRDFYVEKLAEL 414 Query: 419 ----LGILDDSQ-----------LERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPE 463 +G ++ + ER +G R ++RT +R + LL+Q P Sbjct: 415 AHTGVGRIEQAVEQGGEGARPTAPERPPAARRPAGGGRGAAMVRRTPVRQALTLLLQRPA 474 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 L PL+ L LPGL L R+++ P + T LL+ ++G A L +L+ W+ Sbjct: 475 LVAHAGPLDQL-HGDLPGLDLLRQILEIARDHPDVNTAGLLQRFQGHPQEAALWRLATWE 533 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 E FTD L + + + EL A + + +L TL Q Sbjct: 534 --LPGGDLEGEFTDCLERIRQACSSRQTSELRAELDEERDFDAAKDKLRTLMQRR 586 >UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PRIM_BUCAP Length = 579 Score = 606 bits (1562), Expect = e-172, Method: Composition-based stats. Identities = 284/582 (48%), Positives = 404/582 (69%), Gaps = 4/582 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G+IP+ FIN+LL RT+IV+LI+ R+KLKK GKN+ CPFHN+KTPSFTV+ EKQFY+ Sbjct: 1 MSGKIPKYFINELLFRTNIVELIETRIKLKKNGKNYQTHCPFHNDKTPSFTVSYEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAIDFL+NYD L FVE++EELA +H++E+PF+ + ++Q LY LM Sbjct: 61 CFGCSAHGNAIDFLINYDNLNFVESIEELATIHSIEIPFDKKGTIEKKIYLKKQKLYFLM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D ++ YQ+++ SA +YL +RG++ +I F IGF+ WD K+F + + Sbjct: 121 DKMSKLYQKNI--IFTNSANKYLTERGINKNMIDFFCIGFSSNKWDLFSKQFNIKKDFEK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIF 239 L+ ++ TN G YD F+ R++FPI D+ GR+I FGGR + N+ PKYLNS E DIF Sbjct: 179 DLLHYKIISTNKNGYIYDTFQGRIVFPIHDQHGRIISFGGRSITNNILPKYLNSHENDIF 238 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+Q+YGLY+ ++ +++P LLVVEGY+DV+ L QY I Y V+SLGTS T +HIQ+LFR Sbjct: 239 HKGKQIYGLYQVKKKHSKPKYLLVVEGYIDVIMLTQYNIEYVVSSLGTSITKEHIQILFR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN VI CYDGD AGR+A+WR L+ ALPY++D + ++F+ LP+ EDPDT+++KEG++ F+ Sbjct: 299 HTNTVIYCYDGDDAGRNASWRTLKIALPYISDKKNIKFIILPNNEDPDTIIKKEGQKKFQ 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R++ A+ +S F F +++ VDLS+ D + LS ALPLI+ + +T+RIYLRQ L + Sbjct: 359 LRIDNALTMSKFFFKNILKNVDLSSDDDKFHLSVRALPLINCISSDTIRIYLRQILARTI 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 GI+DD Q E+ + + S Q+K T MR LIGLL+QNP LA LVP + + K+ Sbjct: 419 GIVDDYQFEKFLYEKERKKKSLQF-QIKHTPMRTLIGLLIQNPNLARLVPSTKKFENEKI 477 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 GL +F E++ TC P TGQLLE YR + L+ LS WD + K + F D L Sbjct: 478 QGLPIFLEILKTCSDNPNFNTGQLLEFYRYSKIINILKILSKWDHMIIKEKIQNMFLDLL 537 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + +LE RQE+LIA+ER GL+ +E+ E+W++N++L+KK Sbjct: 538 KNTYSKILEKRQEKLIAKERIQGLTIDEKKEIWSINKKLSKK 579 >UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus RepID=Q602R8_METCA Length = 571 Score = 605 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 260/578 (44%), Positives = 363/578 (62%), Gaps = 14/578 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+PR FI+DL+AR DIVDLIDARV LKK G +F A CPFH+EKTPSF+V+ EKQFYH Sbjct: 1 MAGRLPREFIDDLIARIDIVDLIDARVPLKKSGSSFLARCPFHSEKTPSFSVSREKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM+Y+ F E +E LA + +++P + + Q +Y ++ Sbjct: 61 CFGCGAHGNAISFLMDYEHQSFPEALETLATLAGIDLPKAMATPGANPSASL-QPVYDIL 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY Q L+ P A A+ YL KRGL+ E+ R+ +G+APPGW+++ R Sbjct: 120 ERAAGFYIQQLRDHPDAGQAKIYLRKRGLTGEIARRYRLGYAPPGWNSL-----PADWPR 174 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 LI +G+++ + YDRFR R+MFPIRD+RGRVIGFGGR LG+DTPKYLNSPET++F Sbjct: 175 TLLIQSGLVIEKGR-SCYDRFRHRIMFPIRDRRGRVIGFGGRTLGDDTPKYLNSPETEVF 233 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG++LYGL+E + P R+LVVEGY+DV+ALAQ+GIN AVA+LGTST+A+H+ LLFR Sbjct: 234 RKGKELYGLHELLESTPRPRRILVVEGYLDVIALAQHGINDAVATLGTSTSAEHVHLLFR 293 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ C+DGD AG AAWRALE +LP + +GR++RF+ LP GEDPD+L+RKEG+EAFE Sbjct: 294 FTREIVFCFDGDAAGHKAAWRALEASLPLLQEGREIRFIHLPAGEDPDSLIRKEGREAFE 353 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +R+ QA P S +LF +L +DL + +GRA L A L+ ++P R + Q L Sbjct: 354 SRIGQASPFSDYLFRTLQKDLDLRSIEGRATLQKQARELLDRLPVGAFRTLMEQRLSEFT 413 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLK-RTTMRILIGLLVQNPELATLVPPLENLDENK 478 G+ + K+ E+ + P Q++ + R ++ LL+ P LA L+ P + Sbjct: 414 GVAPPA----PASKSLENRLGHPSGQVRPPSAWRNVVTLLLHRPRLAKLISPEIRARLIE 469 Query: 479 LP-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 P L ++ + T G L EH R T L + + E+ F D Sbjct: 470 NPRAGPLIARILEYTDLRDTPTAGMLFEHLRETPEGELARNLLKPGLLTPEEGMEREFVD 529 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 +L+ + L + R +LI + + L++ ER EL L Sbjct: 530 ALDRVRALLRDERLSQLIEKSKAAQLTDSEREELRKLT 567 >UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y846_9GAMM Length = 611 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 261/600 (43%), Positives = 368/600 (61%), Gaps = 36/600 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP+ FI+DLL R DIV++ID RV LKK G+NF ACCPFH EKTPSF+VN EKQFY+ Sbjct: 1 MSGRIPQSFIDDLLDRLDIVEVIDRRVGLKKSGRNFTACCPFHEEKTPSFSVNQEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M+Y++++F +E LA LEVP EA + Q ++ + +Y ++ Sbjct: 61 CFGCGAGGNAIGFIMDYERMDFPRAIEVLADTAGLEVPREASAFQEQPQQKKN--IYTIL 118 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +YQQ L+ P A YL+ RGLS E+ F +G+APPGWDN+L G + E+R Sbjct: 119 EKAAVYYQQQLKEHPQKQRAVDYLKARGLSGEIARDFDMGYAPPGWDNLLNHLGQSDEDR 178 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q LID GML+ ++ + YDRFR+R++FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 179 QLLIDGGMLIEKEEENKLYDRFRDRIIFPIRDNRGRVIAFGGRVLGDDKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK ++LYGLY++++ N + RLLVVEGYMDVVALAQ+GIN++ A+LGT+T+ DH+ +F Sbjct: 239 FHKSKELYGLYQSRKANRQLQRLLVVEGYMDVVALAQHGINWSAATLGTATSTDHLNRVF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C+DGD AGR AA RAL++ALP M DGR+ RF+FLP GEDPD++VR G F Sbjct: 299 RQCPEVIFCFDGDEAGRKAAVRALDSALPAMEDGRRARFLFLPQGEDPDSMVRAIGASNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +E+A PL +LFN+ +DL + DGRAR+STLA PLI ++PG + + L ++ Sbjct: 359 IRLVEKAEPLEEYLFNAQADGLDLGSLDGRARMSTLAAPLIDKLPGGVFKELMMSSLADR 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR-------------------------- 452 G+ + E L + P P + R Sbjct: 419 TGLSLEKLSEILQRHKRNKQATEPQPASPQLPDRAPLNTPASPKRRDKGLVKSETMRDPI 478 Query: 453 -ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 I LL+ +P+ A+ V L ++ L ++ +P T+ L+ H+ G + Sbjct: 479 LYAIALLLHDPKAASHVTIPATLLQSDDGNAPLLIAMLELLHKRPDSTSAMLIGHWYGES 538 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSL----LELRQEELIARERTHGLSNEE 567 TL++L + E D+L H+ L + +++++++ LS+EE Sbjct: 539 WGETLQQLLHAEQFIPSTDIELELIDTLQHLDRRHQHQDLGHQLDKILSKDYAS-LSDEE 597 >UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID=Q7VQR1_BLOFL Length = 588 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 387/586 (66%), Gaps = 8/586 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I++L++RT+IV +I+ R+ LKKQG NF ACCPFH EKTPSFTVN +K+FY+ Sbjct: 1 MINRIPQALIDELISRTNIVHIINQRIPLKKQGSNFIACCPFHVEKTPSFTVNLKKKFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG+HGN I+FLM++D+L F+E++++L+ +H + + ++ + +Y M Sbjct: 61 CFSCGSHGNIINFLMHHDQLTFIESIQQLSILHGISIKHFL--YKTKNNNYHGDIIYTFM 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +YQ +L+ + A +YL+ RGL+ I F IGFAP GW+N+L + N + Sbjct: 119 RDICNYYQNNLKHKKYSYAYKYLKNRGLTDSSIIDFKIGFAPMGWNNILTNINLSSYNHK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDI 238 + +GM + Q + YDRFR R+MFP+ +K G++I FGGR++ N+ PKYLNSP+T I Sbjct: 179 LIHQSGMWIKYHQNKKYDRFRNRIMFPMHNKLGKIIAFGGRLIQNNNTEPKYLNSPDTYI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + LYG YE +L+VEGY+DV+ L Q+G+NYAVASLGTS T +HIQL++ Sbjct: 239 FKKNQYLYGFYEICTKYKNIPYILLVEGYIDVIILTQFGVNYAVASLGTSITINHIQLIY 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 TN +ICCYDGD AG+ AAWR L LPY+ D R++ FMFLP EDPDTL+RK GK+ F Sbjct: 299 SVTNQMICCYDGDSAGKKAAWRTLNIILPYLHDHREICFMFLPVKEDPDTLIRKIGKDNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ +A LS F+F++L+ +V + T +GR +LS L LP+I+++PG+ L++ L Q+L NK Sbjct: 359 LKQISKAQSLSNFIFDTLLHKVKIQTLEGRVKLSHLILPMINKIPGQILKLCLLQQLSNK 418 Query: 419 LGILDDSQLERLMPKAAESGVSR-PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 +GILD+++L +L+ + + + S + ILIGLL+QNP+LA LVP ++ L E Sbjct: 419 IGILDENKLNQLLIQHSPTLTSNVQNNDITYNIKHILIGLLIQNPKLAKLVPTIKGLKEC 478 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA---TLEKLSMWDDIADKNIAEQT 534 K + F +LV C S P LTT QL+ +Y + + +L+ W+ + ++ T Sbjct: 479 KDNIIIEFVKLVKLCKSYPYLTTEQLIHYYHQHDENNCFTNIIRLAHWNHMITDDMITVT 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 F D+L ++D +LE RQ LI+R+RT L EER ELW LNQ L+K Sbjct: 539 FIDTLTKLYDLILEHRQNILISRDRTSTLKIEERQELWLLNQTLSK 584 >UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7R7Q2_KANKD Length = 592 Score = 599 bits (1545), Expect = e-170, Method: Composition-based stats. Identities = 271/589 (46%), Positives = 359/589 (60%), Gaps = 17/589 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ FI++LLAR DIVDLID+RV LKK G N+ ACCPFH EKTPSFTV+ +KQFYHCF Sbjct: 2 GLIPQHFIHELLARVDIVDLIDSRVPLKKTGANYKACCPFHGEKTPSFTVSQDKQFYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG HGNAI FLM YD+LEF + VEELAAM +EVP E + +LY LM+ Sbjct: 62 GCGLHGNAIGFLMEYDRLEFPDAVEELAAMMGMEVPREET---VSNKPKVDTSLYDLMEK 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF---GGNPENR 179 + +YQ+ L+ A A YL+ RGLS E+ +FAIG+ P W N+ F + + + Sbjct: 119 VANYYQKQLKNNKA--AIDYLKSRGLSGEIAKQFAIGYVPGEWRNLETVFPKLQQDKKLQ 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 Q L+D GML+ D+ YDRFR+R+MFPI+DKRGRVI FGGRV+G PKYLNSPET IF Sbjct: 177 QQLVDCGMLIRKDK-SLYDRFRDRIMFPIKDKRGRVIAFGGRVMGQGEPKYLNSPETPIF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK +LYGLY+A+Q N + +RLL+VEGYMDVVALAQ+ INYAVA+LGT+TT+ H+Q LFR Sbjct: 236 HKSNELYGLYQARQANRKLSRLLIVEGYMDVVALAQFDINYAVATLGTATTSSHLQQLFR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 A ++ C+DGDRAGRDAA RALE L M +GR++R MFLPDGEDPD++VRK GKE FE Sbjct: 296 AARELVLCFDGDRAGRDAALRALEHGLSQMREGREIRLMFLPDGEDPDSMVRKVGKEQFE 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A PL F+ L QVDL + GR +L LA P + ++ + L K Sbjct: 356 QMIGEATPLFEFILEHLSSQVDLGSVSGRGQLVHLAKPYLDKITDPIYHEFFSSALAEKA 415 Query: 420 GILDDSQLERLMPKAAESGVSR-----PVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 + + + + P T+++ I LL+Q P LA + L Sbjct: 416 NLSESKLAAIIEAPTQPQHPRKPEKSTPQSPKANKTLQLAITLLLQQPSLALAINNYGWL 475 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRG-TNNAATLEKLSMWD-DIADKNIAE 532 G L +L+ P + T LLEH+R T L L+M + + + + Sbjct: 476 QTLPDKGSKLLHQLLEIIHKTPKINTSMLLEHWRDNTKLYDRLASLAMSEREERIQGNEQ 535 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 Q D +N + ++R + L + GL+N+E+ E L LAK+ Sbjct: 536 QELQDCINRLLLHARKIRVDYLQHKAAEQGLTNQEKSEYRQLL-LLAKQ 583 >UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A8PNJ9_9COXI Length = 585 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 252/582 (43%), Positives = 362/582 (62%), Gaps = 20/582 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FIN+LLAR DIV LIDARV L+K+GKN+ ACCPFH+EKTPSFTV EKQFY+CFGC Sbjct: 6 IPQEFINELLARVDIVQLIDARVPLRKKGKNYIACCPFHSEKTPSFTVTPEKQFYYCFGC 65 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GNA +FLM+Y+KL F+E V LA +E+P + Q LY L++ + Sbjct: 66 AISGNAFNFLMDYEKLSFLEAVSILAESLGMEIPH---AAKQQEVYKDSANLYTLLEEVA 122 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY QQ + R YL++R LS E++ +F +G+AP GWD +LK F + L+ Sbjct: 123 QFYANERQQ--NKTVRYYLKQRNLSDEIMTQFRLGYAPLGWDTLLKAFKKE---TERLLT 177 Query: 185 AGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L+ +G+ YDRFR+RV+FPIRD++GRVIGFGGR + PKYLNSPET +FHKG+ Sbjct: 178 VGLLIKKSKGQGYYDRFRDRVLFPIRDRKGRVIGFGGRTVTQGEPKYLNSPETLLFHKGK 237 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGLYE Q N R+LVVEGYMDV+AL Q G +AVA+LGT+ + D + L T Sbjct: 238 ELYGLYEVFQHNRHVERILVVEGYMDVLALFQAGFPFAVATLGTAMSRDQLSRLMSHTQE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 +I C+DGD AG+ AAWR LE +L +TDG RF+ LP GEDPD+ ++K+G + F ME Sbjct: 298 IIFCFDGDSAGKKAAWRVLEQSLALLTDGYIFRFLCLPHGEDPDSFIQKKGADEFMTFME 357 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA L+ FLF+ L+ QVD++ +G+ARL+ LA+PLI +V ++ L ++L + I D Sbjct: 358 QAQSLTEFLFSGLLAQVDITQLEGKARLAKLAVPLIEKVTQGIMQYKLFEQLARLVNI-D 416 Query: 424 DSQLERLMPKAAESGVS------RPVPQLKR-TTMRILIGLLVQNPELATLVPP--LENL 474 L+++ + PV ++ R + MR+ I LL+Q P +A + + L Sbjct: 417 VMTLKKITTHTTNHPLKTMQKKINPVSKVNRFSPMRLAIALLIQFPHIAQSLSDKQCQIL 476 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN-NAATLEKLSMWDDIADKNIAEQ 533 + KLPG L +L + QP LT+ LLE++R + L++L + K+ + Sbjct: 477 NTLKLPGSDLLVQLFSVIKQQPELTSAMLLEYWRDDEVHYKILKQLMGYSITIPKSGVQA 536 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 F D L + S++E + + L+ + + GL+ +E+ +L+ L Sbjct: 537 EFDDLLKFLKKSVIENQIDNLLQQGKQTGLNVQEKKQLYHLM 578 >UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y7B9_NITMU Length = 592 Score = 596 bits (1537), Expect = e-169, Method: Composition-based stats. Identities = 245/600 (40%), Positives = 347/600 (57%), Gaps = 36/600 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + FI +LL RTDIVD+I+ V L++ G N+ ACCPFH+EKTPSFTV+ KQFYHCFG Sbjct: 1 MISQSFIQELLDRTDIVDVIERDVPLRRAGANYSACCPFHSEKTPSFTVSPIKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-----------RHQ 112 CGAHGNAI F+M YD + FVE V ELAA L+VP + S + + Sbjct: 61 CGAHGNAIGFVMEYDGMHFVEAVSELAARIGLQVPAQQAETGSGSQSDSARVKPNGTEYS 120 Query: 113 RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L + M FY++ L+ ++ +A YL++RGL+ ARF IG+AP GW N+ F Sbjct: 121 PGALLEAMKIAARFYREQLK--LSKNAIDYLKQRGLTGATAARFGIGYAPAGWQNLHTSF 178 Query: 173 GGNPENRQS--LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKY 230 G P+N Q L+ AG++V D G+ YDRFR+R+MFPI + +G ++GFGGRVL PKY Sbjct: 179 PGQPDNAQKRLLVQAGLMVEGDGGKCYDRFRDRIMFPIVNLKGMIVGFGGRVLEKGEPKY 238 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 LNSPET +F KGR+LY L+ A++ E +++VVEGYMDVVAL+Q+GI YAVA+LGT+TT Sbjct: 239 LNSPETPLFQKGRELYNLFGARRAIREAGKVIVVEGYMDVVALSQHGIEYAVATLGTATT 298 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 HIQ L R T+N++ C+D D AG+ AAWRALE +L + DG+ + F+FLP+GEDPD+ + Sbjct: 299 PYHIQKLLRQTDNIVFCFDADSAGKKAAWRALEDSLAQLADGKSIGFLFLPEGEDPDSYI 358 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 R G+ AFE +EQ +PLS FLF L + DL + +GRA+L A PL+++V L + Sbjct: 359 RNHGRSAFEKLLEQTLPLSVFLFRELSARTDLKSSEGRAKLVQDAKPLLARVAAPGLALM 418 Query: 411 LRQELGNKLGILDDSQ-----LERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELA 465 L + L G+ + + R+ SRP P + L+ +L+ +P Sbjct: 419 LVKRLAEISGLSERELEGILKIRRVTAFPVREKPSRPKPV---SPYEWLLQILLYHPAYI 475 Query: 466 TLVP-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLE----HYRGTNNAATLEKLS 520 + L D+ + LV P + G L+ H+R + A LE+ + Sbjct: 476 QKLDRELLAYDQEYEKEVAALAALVEFIDVHPHMGEGTLIPLMTVHFRASPYRAILEQAA 535 Query: 521 M----WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 WD D E F ++ + + + R L + + L+ EER EL + Sbjct: 536 SKTLGWDGELD---LEAEFAGAMARLHEMKRKQRMAVLHNKSLS-ALTPEEREELQRMAM 591 >UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRW9_9GAMM Length = 665 Score = 590 bits (1520), Expect = e-167, Method: Composition-based stats. Identities = 255/648 (39%), Positives = 373/648 (57%), Gaps = 72/648 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP+ FI+DLL R DIVD+++ RV LKK GKN+ ACCPFH+EK+PSFTV +KQFY+ Sbjct: 1 MAGRIPQTFIDDLLDRVDIVDVVNGRVPLKKAGKNYKACCPFHDEKSPSFTVAQDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M +D+L+F+ VE LA LE+P EA P Q+ LY ++ Sbjct: 61 CFGCGAGGNALGFVMEFDRLDFLPAVEMLARNAGLEIPREAAQDPKI--SKQKDNLYSIL 118 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +++Q L+ + A YL+ RGLS +V A++ +G+APPGWDN+LK G + + Sbjct: 119 TESDRYFRQQLRTHAGAASAVDYLKARGLSGQVAAQYGMGYAPPGWDNLLKAVGTDEQRT 178 Query: 180 QSLIDAG-MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L ++G +++ ++ + YD FR R+ FPIRD+RGR +GFGGRVL + PKYLNSPET + Sbjct: 179 ALLNESGMLVIKPEEKKQYDFFRHRITFPIRDQRGRTVGFGGRVLDDSKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR+LYGLYEA+Q E L++VEGYMDV+ALAQ+ IN AVA+LGT+ T H+Q +F Sbjct: 239 FSKGRELYGLYEARQKLKEIPCLIMVEGYMDVIALAQFEINNAVATLGTALTESHLQKIF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ ++ C+DGD AGR AA RAL+TALP M DG +F+FLPDGEDPDT+VR+ GK+ F Sbjct: 299 RYTSEIVFCFDGDSAGRKAAARALDTALPEMRDGVSAKFLFLPDGEDPDTMVRQLGKQEF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++++A PLS FLF L +D ST DG+ARLS + P I+++P R + +EL ++ Sbjct: 359 NEQIDRAQPLSEFLFEQLSDGIDSSTADGKARLSKVCAPQINRIPQGVFRQLMLEELSSR 418 Query: 419 LGILDDSQLERLMPKAAESGVS-----------RPVPQL--------------------- 446 GI ++ + + +G +P P+L Sbjct: 419 TGISAENLRDYVATHKPPAGRGNASQQTHQPAHQPAPRLASQPTAHTSNQAPTDEFYSGP 478 Query: 447 -------------------------KRTTMRILIGLLVQNPELATLVPPLENLDENKLPG 481 + + +++L LLV +P+LA V +E L + P Sbjct: 479 PPDDIYGDGDYEPYPETVAVRRSKIRLSPIKVLSALLVNHPQLAEYVEDIEMLSVSADPD 538 Query: 482 LGLFRELVNTCLSQPGLT-TGQLLEHYRGT----NNAATLEKLSMWDDIADKNIA----E 532 + LF +++ S P + T + ++ T L+ L+ + Sbjct: 539 MALFLKILALINSDPTCSKTSHIFARWQATYSDQTELQLLKTLAGSELHQPPKGTGRDDN 598 Query: 533 QTFTDSLNHMFDSLLELR--QEELIARERTHGLSNEERLELWTLNQEL 578 Q F DSLNH+ E + + L+ + +LW ++ +L Sbjct: 599 QEFVDSLNHVIRDAFESLPPERKADFLLAAETLNERQIKQLWKIHMQL 646 >UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN Length = 576 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 242/579 (41%), Positives = 343/579 (59%), Gaps = 12/579 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ FI+DLL RTD+V+LID V LKK+G + ACCPFHNEKTPSF V +KQFYH Sbjct: 1 MSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+MNY F + VE L ++ P + + LY LM Sbjct: 61 CFGCGASGNAISFVMNYLNQGFTDAVETL-RRAWVKCPRDGTG----EKHKSSLNLYNLM 115 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ +YQ+ L+ A YL RGLS E+ R+ +G+AP GW N+ K F P N++ Sbjct: 116 SEVSQYYQKKLKYN-GQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAF---PNNQR 171 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIF 239 L+ GML+ +D+G+ YDR+R R+MFPI D+ GRVIGFGGRVL D PKYLNSPET +F Sbjct: 172 ELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLF 231 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R+LYGL++ P+ ++VVEGYMDV+ALAQ+GI VA+LGT+T+ HIQLL + Sbjct: 232 QKSRELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAK 291 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++I C+DGD AG+ AAWRALE++LP++ G F+FLP+ DPD+LVR EGK F Sbjct: 292 HTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFL 351 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++QA PL F F++L ++LS P G+ +L P + ++ + + L +L Sbjct: 352 ELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLT 411 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 I + +L L+ +ES + R+ +RI I LL+QNPE+ ++ N Sbjct: 412 HI-ESHRLTNLITDKSESKPEVQAA-ISRSPLRIAIALLLQNPEIYSIAIQQINPALLHE 469 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 + +L+ +P T L+E +R ++ + KL+ WD + + F D L Sbjct: 470 QEHHILLKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVL 529 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + E+ + I + R GL+ ERL L L +E Sbjct: 530 LFLQKQNREILIRQYIEKSRKTGLTEAERLSLQNLLKER 568 >UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC Length = 597 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 242/601 (40%), Positives = 341/601 (56%), Gaps = 35/601 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + FI +LL R DIVD++ +KLKK G NF ACCPFHNEKTPSFTVN KQFYHCFG Sbjct: 1 MIAQPFIQELLDRIDIVDIVARHLKLKKAGANFTACCPFHNEKTPSFTVNSSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ----------- 112 CG HGNAI+FLM + + FVE VE LAA +++P + + Sbjct: 61 CGRHGNAINFLMEHSGVSFVEAVESLAAHAGMQIPAWKNINSKASDSGETSLNEVRFDEV 120 Query: 113 ---RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL 169 LY M+ FY+ L+Q + A YL+ RG+S + F IG+AP GW N+ Sbjct: 121 IQTSSDLYGRMEQAAKFYRVQLKQ--SELAIAYLKDRGVSGQTALHFGIGYAPSGWQNLA 178 Query: 170 KRFGG--NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT 227 + F + ++ +L+ +G++V ++ ++YDRFR R+MFPI D + R+IGFGGR L Sbjct: 179 EIFTDYPSGDSSHALVRSGLIVAHESKKNYDRFRHRIMFPILDLKKRIIGFGGRALDGSE 238 Query: 228 PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGT 287 PKYLNSPET +F KGR+LY L A + R++VVEGYMDVV L Q+GI VA+LGT Sbjct: 239 PKYLNSPETPLFIKGRELYNLVSAGPAIRKSGRVVVVEGYMDVVMLVQHGIENVVATLGT 298 Query: 288 STTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPD 347 +TT+ HIQ L R T+ V+ C+DGD AG AAWRALET+LP + DG+ ++F+FLPD EDPD Sbjct: 299 ATTSTHIQKLLRYTDEVVFCFDGDEAGTKAAWRALETSLPQLKDGKDIKFLFLPDKEDPD 358 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 + +RK GK+AF+ +E+A LS F L +V+LST +GRARL A PL+ Q+ Sbjct: 359 SYIRKYGKDAFKNLLEKAQLLSVFFCKELSSRVNLSTSEGRARLVQQAEPLLVQINAPIF 418 Query: 408 RIYLRQELGNKLGILDDSQL------ERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQN 461 L + + G+ + + ++ P + S VSRP L T R LI +L+ Sbjct: 419 GFMLMKRISELAGVDQNQLIAFLKPGKKNQPSISRSNVSRP---LSVTPYRRLIQILLHT 475 Query: 462 PELATLVP-PLENLDENKLPGLGLFRELVNT-----CLSQPGLTTGQLLEHYRGTNNAAT 515 P + L L++ + L LV+ C S L + ++ H T + Sbjct: 476 PAYVDKLDTDLFALNDGQNEEKALLAALVDFLKTSSCTSMDELNSVAIMLHLDQTPHRVL 535 Query: 516 LEKLSMWDDIADKN-IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 LEK++ + D + + FT ++ + ++ + R EL R L+ EE+ EL L Sbjct: 536 LEKIARDIHVKDVDWDIDAEFTGAMVRLREAQRKSRVAELHNRPLAS-LTPEEKKELRRL 594 Query: 575 N 575 Sbjct: 595 I 595 >UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRS5_9GAMM Length = 594 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 227/600 (37%), Positives = 330/600 (55%), Gaps = 30/600 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI++LL R+DIV++I RV LKK G+ F ACCPFH EKTPSF V+ +KQFYH Sbjct: 1 MAGLIPQAFIDELLERSDIVEVIQRRVSLKKAGREFAACCPFHGEKTPSFYVSPQKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM Y+ L F E VE+LA LEVP EAG +R LY+ + Sbjct: 61 CFGCGAHGTAISFLMEYENLSFPEAVEQLAEQAGLEVPREAGGD---DKREAHAPLYEAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +Y Q L+Q A +YL+ RG+ + IG+APP +++ + Q Sbjct: 118 NAAAEYYVQQLRQT--PKAVEYLKNRGIDGNTARDYQIGWAPPS--GLIEALQPR-FSPQ 172 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+DAG+ D G +RFR R+MFPIRD+RGR+ GFGGR++ + PKYLNSPE+++FH Sbjct: 173 QLVDAGLAARRDDGGIRERFRARIMFPIRDRRGRITGFGGRLIEDGEPKYLNSPESEVFH 232 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ +YGL+EA++ + ++VVEGYMDVV LA+ G AVA +GT+ T H+ LFR Sbjct: 233 KGQTIYGLFEARKAGTRLDDIVVVEGYMDVVGLARAGFRRAVACMGTALTRAHLDSLFRQ 292 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + + C+DGD AGR AAWR+L ALP + R++R +FLP+G+DPD+LV ++G +E Sbjct: 293 VSRITLCFDGDAAGRRAAWRSLAEALPAIQGLREVRVLFLPEGDDPDSLVLRDGLAGWEG 352 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+ A+PLS L L + T +GR R + A+ L++ R L + + + Sbjct: 353 RLAAALPLSETLVRLLREEHPTDTAEGRTRFAHAAMKLVATTRDPLFRDQLVERVAQETH 412 Query: 421 ILDDSQLERLM----------------PKAAESGVSRPVPQLKRTTMRI---LIGLLVQN 461 + + E+L E+ + P + T + L+ ++Q+ Sbjct: 413 LSPERLGEQLREAEDGNVRATGPASGPSDIPEAPSAEPAGAARETPSALWGALLARILQH 472 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 PEL L +L +L+ +PG ++ LLE +R + L+ L+ Sbjct: 473 PELEWSQSELADLTAFPGTAAQTLGKLLEALQERPGCSSAHLLERFRDDRHFNRLQALAA 532 Query: 522 WD-DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + D + +Q D + R EL + GL+ E+R EL L L K Sbjct: 533 RELGDGDPKVTQQVAMDCARQLLLQQARTRIRELTRAD--GGLATEQREELARLTALLQK 590 >UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK Length = 660 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 252/648 (38%), Positives = 358/648 (55%), Gaps = 73/648 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DL+ R DIVD++ +RV+LKK GKN+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M++D L+F + VEELA +EVP E G + + LY L+ Sbjct: 61 CFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D + FY+Q+L+ P +A YL+ RGLS E+ F +GFAPPGWDN+LK G + + Sbjct: 121 DAASEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + +IDAG+L+ N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KVMIDAGLLIENAESGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA++ N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR------- 351 R +V+ C+DGD+AGR AAWRALE+ L + DGR+ RF+FLP+GEDPD+LVR Sbjct: 301 RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAF 360 Query: 352 -----------------KEGKEAFEARMEQ-------AMPLSA--------FLFNSLMPQ 379 + G EA +E A PL L + + + Sbjct: 361 MARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQLMRNRLKE 420 Query: 380 VDLSTPDGRARLSTLALPLISQVPGET------LRIYLRQELGNKLGILDDSQLERLMPK 433 + P +L+ A P S +P + G+ + K Sbjct: 421 ITGLDPQQVEQLAQQA-PATSSMPDYDPGYDYDAMASYTPDYGDMPQHDYAPVHQEQAWK 479 Query: 434 AAESGVSRP-------------------------VPQLKRTTMRILIGLLVQNPELATLV 468 + G +P VP + L+ +P LA V Sbjct: 480 PNKGGSKKPWSDKPWDKNRKGGKPWQQRDEAPPRVPAPVEPPTLAALRTLLHHPLLAGKV 539 Query: 469 PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + + + L L+ PGL++ QL+ + GT L L+ + + Sbjct: 540 EDASHFADEEHLYSQLLVALIEAAQKNPGLSSMQLIARWHGTEQGRLLRALAEKEWLIVA 599 Query: 529 NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 + EQ F D++ + E E+L+ + R L++EE+ +L L Sbjct: 600 DNLEQQFFDTITSLSARQRERSLEQLLRKSRQSELTSEEKTQLLALLS 647 >UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYX6_CHRSD Length = 613 Score = 573 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 264/607 (43%), Positives = 355/607 (58%), Gaps = 30/607 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP+ FI+DLLARTD+V+++ RV+LKK G+N+ CPFH EK+PSFTV+ EKQFYH Sbjct: 1 MAGQIPQRFIDDLLARTDVVEIVGERVQLKKAGRNYSGLCPFHQEKSPSFTVSAEKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGCG HGNA+ FLM +D L F E VE+LA+ L+VP E P +R +R + L Sbjct: 61 CFGCGVHGNALRFLMEFDHLRFPEAVEQLASRLGLDVPREGADDPQAQQRERRREEAVNL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ +F+++ L AR YLE+RGLS +++ F IGFAP W+ + + + Sbjct: 121 LELSASFFRERLAMSEGGDARDYLERRGLSADIVREFGIGFAPDKWEALKRHLTERGISD 180 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 I+ G+LV + GRSYDRFR RVMFPIRD +GR I FGGRVLG+ PKYLNSPET + Sbjct: 181 AVQIEYGLLVHREDSGRSYDRFRNRVMFPIRDWKGRTIAFGGRVLGDAKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKGR+LYGLYEA+Q NA R+LVVEGYMDVVALAQ+GI A A+LGTS + DH+Q LF Sbjct: 241 FHKGRELYGLYEARQANARLERMLVVEGYMDVVALAQFGIRNACATLGTSLSEDHLQRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ C+DGDRAGR AA RALET LP M DGRQ+RF+FLP+G+DPD+LVR+EG EAF Sbjct: 301 RLVGEVVFCFDGDRAGRQAARRALETVLPSMIDGRQVRFLFLPEGDDPDSLVRREGAEAF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E R+ A PLS FLF+ DL + R R +T L + ++P L+ L +EL + Sbjct: 361 ENRVLCAAPLSEFLFDQAAEGRDLQRIEDRERFATAVLRALERLPEGVLKSLLLRELSQR 420 Query: 419 LGILDDSQLERLMPKA----------AESGVSRPVPQLKRTTMRI------------LIG 456 G+ + + + L+ +A A+ S P + + L+ Sbjct: 421 TGV-EQANFQALLARADTSQAPHDEGADEASSAPEDAGETPARKAGARDGALGLVGRLLH 479 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 LLV P L + +P + + + L E+V + LL H+ GT L Sbjct: 480 LLVHEPALVSRLPESLDWCPDGVGDGALCHEVVRLIRAGGYRNAQVLLAHFHGTPEGERL 539 Query: 517 EKLSMWDDIADKNI----AEQTFTDSLNHMFDSLLELRQEELIARERTHG-LSNEERLEL 571 L+ + + + E + + L+AR + LS EER L Sbjct: 540 AWLARRELLMPREARGAEVEGLVDGLRRRHSQRSPQEEYDALLARTQAGECLSREERQRL 599 Query: 572 WTLNQEL 578 L EL Sbjct: 600 NELLMEL 606 >UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P264_AZOSE Length = 609 Score = 570 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 251/602 (41%), Positives = 346/602 (57%), Gaps = 34/602 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLLAR DIVD+I+ + LKK G N+ ACCPFH EK+PSF+V+ KQFYHCFG Sbjct: 1 MIPQSFIQDLLARVDIVDVIERHLPLKKGGANYFACCPFHGEKSPSFSVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+A+ FLM Y L FVE V+ELAA L+VP E G P + L + M Sbjct: 61 CGAHGSAVGFLMEYSGLPFVEAVKELAAQAGLQVPQERGPNPRNDKNPAHAALIEAMTVA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 Y+ L+Q A++A YL++RG+S E+ ARF IG+AP W + F + ++L+ Sbjct: 121 ARHYRDQLRQ--ASAAIDYLKRRGVSGEIAARFGIGYAPDDWQGLRSIF--PDYDAKALL 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +AG+++ N+ GR YDRFR R++FPI+D+RGRVI FGGRVL + PKYLNSPET +F KGR Sbjct: 177 EAGLVIENEAGRRYDRFRNRIVFPIQDRRGRVIAFGGRVLDSGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL +AQ+ + +VVEGYMDVVALAQ+GI +VA+LGT+TT HI +L R + Sbjct: 237 ELYGLLQAQKSIRDAGHAIVVEGYMDVVALAQHGIGNSVATLGTATTTHHINVLLRQSQR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AA RALE++L + D L F+FLP+ DPD+ VR G +AF Sbjct: 297 IVFCFDGDAAGRKAARRALESSLEALRDDVTLAFLFLPEQHDPDSFVRAHGADAFRQAAG 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A L+ FL L L T +GRARL A PL++++ LR+ + + + Sbjct: 357 AATTLTNFLLRELQSNCALDTAEGRARLVHEAKPLVTRITAPMLRLQIVKSIAEAC-QFS 415 Query: 424 DSQLERLMPKAAESGVSRP------------------------VPQLK-RTTMRILIGLL 458 S++ER +E G RP P+ K +T+ L+ L+ Sbjct: 416 QSEIERAYG-LSEEGRERPGEHAAAGPHHHPAAAPPRRLTPGMRPRRKPPSTVGTLLRLV 474 Query: 459 VQNPELATLVP-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 +Q+P LA +P L + L + NT + G L+E +R T + TL Sbjct: 475 LQHPALAARLPVDLVPTMNAEGEALVAIIDATNTGDLAANVGLGALVERFRETPHGETLA 534 Query: 518 KLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 K + D D+ + E F D+L + + + L ARER GLS+ ER L L Sbjct: 535 KTAGELVDAEFDEAVVEVLFEDTLRKLHADTIAREIDGLTARERESGLSSIERHRLAALL 594 Query: 576 QE 577 E Sbjct: 595 IE 596 >UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB Length = 590 Score = 567 bits (1462), Expect = e-160, Method: Composition-based stats. Identities = 242/583 (41%), Positives = 344/583 (59%), Gaps = 31/583 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI++LLA+TDIVD+ID +V LKK G N+ ACCPFH EKTPSF+V+ KQFYHCF Sbjct: 1 MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR----QTLYQL 119 CGAHG+AI F+M + L F E V+ LA + VP G + R +R QTL + Sbjct: 61 CGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVHGQNDNPEVRAERKKKQQTLEET 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY Q L+ +A+ YL+KRGLS EVIA + +G+AP GW + + F P Sbjct: 121 TAAAADFYAQQLK--FNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLTQVFQ--PYPN 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +L+D GM++ N+ GR YDRFR R+MFPIR+ RG+VIGFGGRVL + PKYLNSP+T +F Sbjct: 177 TALVDTGMVIDNE-GRHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ LYGLYE + E R+LVVEGYMDVVALAQ+G+ Y VA+LGT+TTA+H+++L R Sbjct: 236 DKGKNLYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ C+DGD AGR AAWRALE ALP + D + L F+FLP+ DPD+ +R GK FE Sbjct: 296 QADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQFE 355 Query: 360 -ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + Q+ PLS + + L + L+T +G+A L + PL++Q+ L L+Q L Sbjct: 356 DALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSEL 415 Query: 419 LGILDDSQLERLMPKAAESGVSR-----PVPQLKRTTMRIL----IGLLVQNPELATLV- 468 +GI D+ + L +A + V + P +K+ M L I L+ NP+ A + Sbjct: 416 VGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQPVMLTLVQRQIRSLLINPDWAAYID 475 Query: 469 -PPLENLDENKLPGLGLFRELVNTCLSQPGL-TTGQLLEHYRGTNNAATLEKLSMWDDIA 526 P LD + L + + + T Q+LE+ RG+ T+ ++ + Sbjct: 476 LPDYLALDGD----FACLANLAESIKNHAAVPETAQVLEYMRGSPYEETITRIFHSTHQS 531 Query: 527 DKNIAE-----QTFTDSLNHMFDSLLELRQEELIARERTHGLS 564 ++ + + F + + + L + E L + GL+ Sbjct: 532 EEMNSSSEEDCENFQIGMKKLLNELKYSQIETLKQKSLQSGLN 574 >UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D285_WIGBR Length = 582 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 249/584 (42%), Positives = 373/584 (63%), Gaps = 5/584 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M I +FIN LL +I++LI + + LKK GKN+ A CPFH EKTPSF+V+ EKQF+H Sbjct: 1 MNAYISNLFINRLLENINIIELISSIINLKKSGKNYFALCPFHQEKTPSFSVSYEKQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQL 119 CFGCG HGNAIDFLMNY+ L F+E++EEL+ + E +R +Y+L Sbjct: 61 CFGCGIHGNAIDFLMNYNNLTFIESIEELSNIAGFAFKKAQSKKIINNEELKKRSDIYKL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ ++ Y++ L + A YL RGL+ + I F+IGF+ N+L + +N Sbjct: 121 MNQVSMIYKKILNSKIFIEANDYLNNRGLNIDSIEEFSIGFSSINI-NILNYLKQSLQNF 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L +G+ + N++ + + F+ R+M P++DK G VI FGGR + N PKYLNS ET IF Sbjct: 180 YLLKSSGIFLINEKKKLSNIFKNRIMIPMKDKYGNVIAFGGRSINNFFPKYLNSKETLIF 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K LYG+YE ++ + ++L+VEGY DV++L+QYGI Y+VASLG TT I+++FR Sbjct: 240 KKSNYLYGIYEIKKRKIKILKILLVEGYFDVISLSQYGIYYSVASLG-CTTPFQIKIIFR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN +ICCYDGD AGR +AW+ L +L Y+ DGR++ F+FLP+ EDPD+L+RK GK++FE Sbjct: 299 LTNKIICCYDGDSAGRRSAWKTLINSLSYLEDGREIFFIFLPNNEDPDSLIRKIGKKSFE 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E A P+S+FLF++L+ + +L DG+ + L LP+I ++PG+ LR+Y+R+E+G K+ Sbjct: 359 ILIEDAKPMSSFLFDTLIKKSNLYHLDGKVKFIKLILPIIKKIPGKNLRLYIRKEIGYKI 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD--EN 477 GIL+D QLE+ + + K M LIGLL+QNP+L+ L+ + Sbjct: 419 GILEDYQLEKFLSLKEIKYKKNKQIKYKNNIMNTLIGLLIQNPKLSKLISKKNEIKLYNI 478 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ + F EL+ C + + T Q+LEHYRG LE L++WD + +N+ +Q F + Sbjct: 479 RIKEIPFFIELIKICKNNTNINTSQILEHYRGKKYHNHLENLAIWDHMISENLIKQIFIE 538 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 +L+ ++ +L RQ LI+R R LS EE+ ELW +N++L+KK Sbjct: 539 TLSSLYKIILVSRQNILISRARIQDLSVEEKKELWCINKKLSKK 582 >UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=Q1N3T7_9GAMM Length = 661 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 252/607 (41%), Positives = 350/607 (57%), Gaps = 45/607 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R +IVD++D+R+KLKK GKN ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLHRVNIVDVVDSRIKLKKAGKNHSACCPFHNEKTPSFTVSSDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M YD ++F + VE LA +EVP E S ++ +R LY+LM Sbjct: 61 CFGCGAKGNAVGFVMEYDNVDFPQAVEMLADSVGMEVPREEVSPQQAKKQEERTNLYELM 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 N FYQ+ L+ +A YL+ RGLS + F IGFAPPGW N+ + E+ Sbjct: 121 GSANEFYQRQLRYHDAKQAAVDYLKNRGLSGKAAKFFNIGFAPPGWQNLQDSLANDDESL 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +++ AG+ + NDQGR YDRFR R++FPIRD RGR IGFG R LG+D PKYLNSPET IF Sbjct: 181 AAMVTAGLTIKNDQGRHYDRFRNRIIFPIRDVRGRTIGFGARTLGDDKPKYLNSPETPIF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +KG++LYGLYE +Q R L+VEGYMDVVAL ++GI+YAVA+LGT+T+ H+Q LF+ Sbjct: 241 NKGQELYGLYECRQIRQPLKRFLIVEGYMDVVALHEFGIHYAVATLGTATSDTHLQKLFK 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ C+DGD AGR AA R LE LP + DG+Q+RFMFLP+GEDPD+LVRKEGK+ FE Sbjct: 301 IAPEIVFCFDGDEAGRRAAKRGLELVLPIIEDGQQIRFMFLPEGEDPDSLVRKEGKDGFE 360 Query: 360 ARMEQAMPLSAFLFNSLMPQV-DLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 RM+ A LS FL +L + D ++ +GRARL+ LA PLI +PG LR Q+L Sbjct: 361 LRMQDADGLSEFLLQTLKDDIDDPASLEGRARLAKLAAPLIKNIPGIALRSLFWQDLKEH 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTT---------------------------- 450 I D + +A P P ++ + Sbjct: 421 THIDVDELKQLAESEAKPELAPAPNPMVQSSAASHHHEHYESSYSSYDEEMGESREQPIQ 480 Query: 451 -----------MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLT 499 +R I +L+ P+ L E + P L ++++ P Sbjct: 481 STTSGSQEPRLIRQAIAILLHAPQALETFGDTGFLQEFQGPNTQLLQQMITALRQSPRQD 540 Query: 500 TGQLLEHYRGTNNAAT---LEKLSMWDDIADKNIAEQT-FTDSLNHMFDSLLELRQEELI 555 +L +A ++L+ + + + ++++Q D L + + + +I Sbjct: 541 LLGVLSLLNKEVDAEAYRQFKELAEYHNKQEGHLSQQQVAMDCLVQLRLKAAKNIKARMI 600 Query: 556 ARERTHG 562 + G Sbjct: 601 KKAAQFG 607 >UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6WZ17_METML Length = 595 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 242/582 (41%), Positives = 330/582 (56%), Gaps = 12/582 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 17 LIPESFIQELLNRVDIVDVIDKSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFG 76 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG ++ F+M Y L FV+ + +LA M + VP E + L + + Sbjct: 77 CGAHGTSVGFIMEYQGLSFVDAIHDLAKMVGMTVPQEVRDS-DKPAPKVVVGLQEALQQA 135 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+ L++ + A +YL+ RGLS +V A+F +G+AP GW N+ F ++L Sbjct: 136 ANFYKAELKK--SPRAIEYLKARGLSGQVAAKFQVGYAPAGWQNLQSVFPQ--YENEALT 191 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKG 242 AG++V N+QGR YDRFR+R+MFPI D++G+VIGFGGRV+ DTPKY NSPET +F KG Sbjct: 192 VAGLVVENEQGRRYDRFRDRIMFPIHDQKGQVIGFGGRVINPEDTPKYYNSPETPLFQKG 251 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 +LYGL+ A++ + R LVVEGYMDVVALAQYGI YAVA+LGT+TT HI L R + Sbjct: 252 HELYGLFLARRAIRDAGRALVVEGYMDVVALAQYGIEYAVAALGTATTPYHITKLTRQAD 311 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 ++ C+DGD AGR AAWRA ALP +TDG +L F+FLP DPD+ VR+ GKE FEA + Sbjct: 312 EIVFCFDGDNAGRTAAWRAAMNALPALTDGLKLSFLFLPKEHDPDSYVREFGKEKFEAEI 371 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AMPLS ++ L L + + R R A P++ Q+ +YLR+++ + Sbjct: 372 KSAMPLSQYILQHLSEDNPLQSQEDRVRFLNEAEPIMQQISAPRSAMYLRKKVAELAQLS 431 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTM---RILIGLLVQNPELATLVPPLENLDENKL 479 D L + P+L RTTM + +L+ +PELA LE L E Sbjct: 432 ADEMQALLKLPNLNKAPMKAKPKLTRTTMSLQKRFGLMLLMHPELAQE-DDLELLSERDD 490 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI-AEQTFTDS 538 L R+++ CL P LL +A L +L + D + Q + Sbjct: 491 AD-ALLRQVIEICLLHPHSKPAVLLRELESKIDANVLPELQRELTLLDDTLDHAQELAGA 549 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + + L+AR LS E+ L +K Sbjct: 550 RQQLQAVHTQRQSASLLARISEKPLSALTADEIALLKSVGSK 591 >UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 RepID=A4BE36_9GAMM Length = 621 Score = 558 bits (1439), Expect = e-157, Method: Composition-based stats. Identities = 249/619 (40%), Positives = 353/619 (57%), Gaps = 43/619 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP FI+ LL RTDI+++I R+ LKK+GK++ ACCPFHNE +PSF+VN KQFY+ Sbjct: 1 MAGLIPNDFIDSLLDRTDILEVIGNRIDLKKKGKDYWACCPFHNENSPSFSVNPGKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G A+ FL YD L FVE++EELA + +EVP E S ++ ++ QR+TL+ LM Sbjct: 61 CFGCGASGTAVKFLQEYDNLSFVESIEELARIAGVEVPREEVSEKARQQQQQRKTLHDLM 120 Query: 121 D-GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + F Q Q P A + Y+ RGL+ + + F IGFAPPGWDN+++ F NR Sbjct: 121 NSCADYFAHQLYQHPYAQGVQDYILGRGLTEDTVHTFQIGFAPPGWDNLIQHFRSENTNR 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDI 238 +L+ GML ND GR YDRFR R+MFPIRD +GRVI FGGRV+ ++ PKYLNSPET I Sbjct: 181 -ALLKVGMLTQNDNGRIYDRFRNRLMFPIRDIKGRVIAFGGRVMSADEKPKYLNSPETPI 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG +LYGLYEA++ + + +++VEGYMDVVALAQ+G+ AVA+LGT+T+ H+Q LF Sbjct: 240 FHKGHELYGLYEARKALKDFDNIIIVEGYMDVVALAQHGVRNAVATLGTATSETHVQRLF 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ ++ C+DGD AGR AA RAL + + DG Q RF+FLPDGEDPDTLV+KEG + F Sbjct: 300 KQTSEIVFCFDGDEAGRRAAIRALTNTMSSLKDGLQARFLFLPDGEDPDTLVQKEGHDGF 359 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R++QA L FL+ L Q D+S DG+ARL++LA I++VP ++ L +L N Sbjct: 360 MRRVKQAQSLPDFLYQHLQTQADISRLDGKARLASLAQGWINKVPEGFMKQLLLNQLSNL 419 Query: 419 LGILDDSQLERLMPKAAESGV-----------------------SRPVPQLKRTTMRI-- 453 +G+ + ++ P+ S PV + + ++RI Sbjct: 420 VGLSIEQIEQQFKPEPPSVPAEPMPETVIPTAPPPFDDAQGEFYSVPVIEKRELSVRIGF 479 Query: 454 ---LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT 510 + L++ P LA V P L + ++ P ++ Sbjct: 480 VHRALAWLIRFPHLADYVTPETLGRLKASGDHQLLQRVIELLQQAPRKDLYFAFDYLCQH 539 Query: 511 NNAATLEKL----------SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT 560 TL + + D +K+ A Q L + + L R Sbjct: 540 GLRETLSPIAASDYLWLEAANDDHKDEKDFARQELEKILRALTQKAPDDEYNALKQRVMA 599 Query: 561 --HGLSNEERLELWTLNQE 577 L++ E+ L ++ Sbjct: 600 LDPSLTDAEKQRYRELLKQ 618 >UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GBZ6_9FIRM Length = 604 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 188/591 (31%), Positives = 292/591 (49%), Gaps = 23/591 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP F++++ R D+V+LI V+LK+ G+N+ CPFH EKTPSF+V+ +KQ +H Sbjct: 1 MEGNIPNEFVDEVRTRFDVVELISEYVQLKRSGRNYFGLCPFHGEKTPSFSVSQDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + + F E V+ELA +++P S +Q ++ L + M Sbjct: 61 CFGCGEGGNVFSFLMKMEGIPFPEAVKELARRAGMQLPSTVSSVAAQRAEQKKSRLREAM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +Y+ LQ A YLEKRGL+ E+I F +GFAP W+ V + + Sbjct: 121 AWADKYYRYWLQHQDGAKALHYLEKRGLTREIIESFGLGFAPNRWEAVKQFLRKKDFTER 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+DAG+L N + ++YDRFR R+ FPI RG I FGGR+L + PKYLNSPET +F Sbjct: 181 ELLDAGLLSDNPK-KTYDRFRNRITFPICSPRGETIAFGGRILDDGEPKYLNSPETPLFD 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LY ++ A++ + ++ EGYMDV+A Q G+ AVASLGTS T +LL Sbjct: 240 KGKNLYAIHLAREAIRREKQAIIFEGYMDVIAAHQAGVTNAVASLGTSLTEAQARLLRSQ 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V+ YD D AG+ A WR L+ + G ++ LP G DPD +R+ G +AF Sbjct: 300 AEEVVIVYDADAAGQAATWRGLQIL---KSAGCLVKVGRLPAGMDPDDYIRRHGGDAFRK 356 Query: 361 -RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A+ L + SL Q L + R RL +++ V R + L Sbjct: 357 DIIGEALLLVDYQMASLAQQYSLDKDEDRIRLFNKISEILASVDNAMEREDYVTKAAAML 416 Query: 420 GILDDSQLERLMPKA----AESGVSRPVPQLKRTTMR---------ILIGLLVQNPELAT 466 + + E L K +R +K + R +I L + P L Sbjct: 417 KLPATAVREELNKKKQSASRPHSQTRKSSTIKPSLQRETAAQKAPMQIIALWGRFPSLIE 476 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 L+E P L + + + +LL+ + + TL +L + ++ Sbjct: 477 --ESAGQLEEEDFPA-ELIPAFLEAQKEKASFSAARLLDSLQEEKHRQTLSRLLIHEEY- 532 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 D+ IA++ D + + + RQ + + + + E+ L+++ Sbjct: 533 DEKIAKKAIDDCI-RLLKCVRIARQRKELEAQMASLDPVAAKGEINELSKK 582 >UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q21MV0_SACD2 Length = 656 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 261/649 (40%), Positives = 370/649 (57%), Gaps = 77/649 (11%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP+ FI+DLL R DIV++ID RVKLKK GKN+ ACCPFH EKTPSFTV+ +KQFY+CFG Sbjct: 3 RIPQSFIDDLLNRLDIVEVIDHRVKLKKAGKNYSACCPFHEEKTPSFTVSPDKQFYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA+GNA+ FLM Y++ FV+ VE LA + ++VP E + + QR LY ++ Sbjct: 63 CGANGNAVGFLMEYERQGFVDAVESLARVAGMQVPKETTEKDVKHAKKQRG-LYDILGLA 121 Query: 124 NTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +T+YQ+ L++ + A YL+ RGLS + F +G+APPGWDN+L + G N E+R L Sbjct: 122 STYYQKQLKEHSSRERAVSYLKGRGLSGAIARDFGMGYAPPGWDNLLVKLGTNEEDRHLL 181 Query: 183 IDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +++G+++ + +G+ YDRFR R+MFPI+D RGRVIGFGGRVLG+D PKYLNSPET +F K Sbjct: 182 VESGLVIRKEGEGKLYDRFRHRIMFPIKDTRGRVIGFGGRVLGDDKPKYLNSPETPVFSK 241 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR+LYGLYEA+Q N + RLLVVEGYMDV+ALAQYG+ AVA+LGT+ DH++L FR Sbjct: 242 GRELYGLYEARQSNRKLERLLVVEGYMDVIALAQYGMRNAVATLGTACGEDHLKLAFRYV 301 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 N V+ C+DGD AGR AA RAL ALP M DGRQ+RF+FLP+G+DPDTLVR+ G E F A+ Sbjct: 302 NEVVFCFDGDNAGRTAAKRALVNALPAMEDGRQIRFLFLPEGQDPDTLVRQIGAERFTAQ 361 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 +E +PL FLF+++ +D+++ +GRAR LA PL++ +P R + L + G+ Sbjct: 362 IENGVPLEEFLFDAVAEGIDVNSMEGRARFGKLAAPLLNTLPNGIYRELMFANLAKRTGL 421 Query: 422 LDDSQLERLMPKAA-ESGVSRPVPQLKRTTMRILIGLLVQN----------PELATLVPP 470 D LE K + + ++P P + L L N P + Sbjct: 422 SLDLLLELTKEKVSLVAEPAKPDPSQQPQPEPELPAHLGANIGTSISASTPPHIDESYAH 481 Query: 471 LENLDENKLPGLGL----------------------------FRELVNTCLSQPGLTTGQ 502 + L+ + + + +LV T + P + Sbjct: 482 IPPLEPDYVARTAQTSAPKSAPVKRSSITLNPVRLCTILLLEYPKLVATLNNIPARAETE 541 Query: 503 ---------LLEHYRGTNNAATLEKLSMWD------------DIADKNIA---------- 531 L+E+ + N + L W D+ + Sbjct: 542 DEELTRLFDLIEYIQQRPNCSFNSILGYWGGRYGIEQQQALADLVANQLMGSVRSVENYN 601 Query: 532 -EQTFTDSLNHMFDSLLELRQEELIARERTHG---LSNEERLELWTLNQ 576 EQ SL + L + ++ +A+ + G L+NEE+ L + Sbjct: 602 PEQELEQSLARIGQKLQKANNQKELAKLQAKGLGNLNNEEKERFRELVR 650 >UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF Length = 589 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 181/581 (31%), Positives = 282/581 (48%), Gaps = 11/581 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP IN++ R I++++ V L+K G N+ CPFH EKT SF VN + +HCFG Sbjct: 3 MIPDDKINEVRERASILEIVSDYVSLRKSGANYQGICPFHGEKTGSFNVNPARGIFHCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNAI F+M + L F E V+ LA + + + + + +R+ LY++ Sbjct: 63 CGVGGNAISFIMKIEGLSFPEAVKFLAKRVGVTIEERPRTATEKRQSDERELLYKINGQA 122 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY+Q L P + RQYLE+RG+ + IG+AP WD++ + Sbjct: 123 AAFYRQLLLNDPAGEAGRQYLERRGVDSATSEAYGIGYAPDKWDSLTRHLEQLRVPLDLA 182 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 G++ + GR YD FR R++F I D GR IGFGGRVL + PKY+NSPE+ I+HK Sbjct: 183 EKLGLIKRREGGRHYDAFRNRLLFVIADMHGRPIGFGGRVLDDSLPKYINSPESPIYHKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 L+GL ++ E ++VEGY D +AL Q GI VA+ GT+ T HI+LL R N Sbjct: 243 EVLFGLNLSKYAMREKGNGIIVEGYFDHLALYQAGIRNVVATCGTALTTGHIKLLQRYAN 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V +DGD AGR A R++E ++ + + LP G+DPDT ++ +G AF + Sbjct: 303 KVYTLFDGDSAGRKATLRSMEL---FLDEKLPASVIELPPGDDPDTFLKTQGDGAFAGHL 359 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 +A P+ F F+ L+ Q D T +G+ P + ++ R +E+ KLG+ Sbjct: 360 AKAKPIFEFFFSELLGQYDSGTVEGKVGTIEALTPHLMKIVNPIERDLYIKEISRKLGVD 419 Query: 423 DDSQLERLMPKAAESG-----VSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 +++ S R P+ + LI L+ + + V + Sbjct: 420 PRQMQKKIGRSPVSSADLAVPRERVKPRSNKGPEETLISLMGKYAGVIKRVRDYGAANLF 479 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 L + ++ S+ G+ LLE T + L + M DD D+ A + F Sbjct: 480 SADLLPIAEAIMAHNDSEAGIDWALLLEQIDSTEERSRLAGIFMDDDHLDEIDANKAFDQ 539 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 S+L+ + + +E + S+ ER W + ++L Sbjct: 540 CRMSRDRSMLKDGDVKELKKELSRLDSDSER--YWEILRKL 578 >UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47IP7_DECAR Length = 578 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 233/574 (40%), Positives = 339/574 (59%), Gaps = 13/574 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI DLLAR DIVDL+D V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPDSFIQDLLARVDIVDLVDGYVPLKKAGANYAACCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG AI F+M Y L FV+ V++LA ++VP G + Q +TL ++M Sbjct: 61 CGAHGTAISFVMEYQGLGFVDAVKDLATRAGMQVPESEGRSFKDEKPGQTRTLIEIMARA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y+ L++ + A +Y +KRGL+ E+ AR+ IG+AP GW N+ + F N L Sbjct: 121 AAYYKDQLKK--SPHAIEYCKKRGLTGEIAARYGIGYAPDGWQNLQEVF--PDYNADELK 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+++ N+ GR YDRFR+R+M PI + +G +I FGGR++ PKYLNSPET +F KGR Sbjct: 177 IAGLVIENEAGRRYDRFRDRLMIPIINPKGEIIAFGGRIIDQGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +L+GL +A+Q E + +V EGYMDV+ALAQ G+ AVA+LGT+TTA H+ L R + Sbjct: 237 ELFGLPQARQALRETDTAIVTEGYMDVIALAQNGVGNAVATLGTATTATHVTKLLRQVDR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE +L + D ++L F+FLP DPD+ +R+ GKE F+ ++ Sbjct: 297 IVFCFDGDNAGRKAAWRALENSLEALADNKRLGFIFLPQEHDPDSYIREFGKEQFDRQVT 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QAMPLS FL L + DL++ +G+A+L A PL+ ++P LR+ L + L G Sbjct: 357 QAMPLSDFLLRELAQRCDLTSSEGKAQLIYEAKPLLLKLPTPLLRLQLVKRLAEASGFA- 415 Query: 424 DSQLERLMPKAAESGVSRP-VPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGL 482 +++ERL + + + P + + R L+ +++ P+LA +P D + L Sbjct: 416 QAEVERLCELKSYTPAAPPKAKRTAPSLTRNLLRIVLHKPQLAAQLPIALLPDTPERAAL 475 Query: 483 GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW--DDIADKNIAEQTFTDSLN 540 +LV ++ + L E RG + +E + D+ AE F D+L Sbjct: 476 TRLHQLVTA--NRETSSYAGLREQLRGLPEESVIENAASELLGLPFDEEGAEMEFRDTLE 533 Query: 541 HMFDSLLELRQEELIARERT---HGLSNEERLEL 571 + + + EL + + GLS E+ Sbjct: 534 KLQEGGEKRAFAELQVKAQQFGVAGLSAAEKQAY 567 >UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA1_THASP Length = 631 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 240/625 (38%), Positives = 340/625 (54%), Gaps = 58/625 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ F+ +LL+R DIVD+I+ + LKK G N+ ACCPFH EK+ SF+V+ KQFYHCFG Sbjct: 1 MIPQSFVQELLSRVDIVDVIERYLPLKKSGANYFACCPFHGEKSASFSVSPSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG HG+A+ FLM Y L FV+ ++ELAA L+VP + G + + + LY+ M Sbjct: 61 CGVHGSAVGFLMEYSGLGFVDAIKELAAQVGLQVP-DDGRSAAPVHDDPSERLYEAMAVA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+ L+ + A YL++RGLS EV ARF +G+AP W + K F ++L Sbjct: 120 ARFYRDQLK--PSRQAIDYLKRRGLSGEVAARFGLGYAPDEWQALEKAF--PDYQAKTLA 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 DAG+++ N+QGR YDRFR R++FPI D+RGR+I FGGRVL PKYLNSPET +F KGR Sbjct: 176 DAGLVIDNEQGRRYDRFRNRIIFPIHDRRGRIIAFGGRVLDKGEPKYLNSPETPLFEKGR 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL+ AQ+ + +VVEGYMDVVALAQ+ I AVA+LGT+TT HI L R T+ Sbjct: 236 ELYGLFLAQKAIRDAGFAVVVEGYMDVVALAQFAIENAVATLGTATTPQHIHTLLRQTDR 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE AL + D L F+FLP DPD+ VR EG EAF Sbjct: 296 IVFCFDGDAAGRRAAWRALENALESLRDDATLAFLFLPAEHDPDSFVRAEGTEAFRKAAL 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A PL +FL L + L + +GRA A PL++++ L++ + + + G+ Sbjct: 356 AATPLGSFLIQELSGRHPLDSAEGRAAFVHEAAPLVTRIAAPLLKLQVVKAVAESAGMTQ 415 Query: 424 ---DSQLERLMPKAAESG----------------------------------------VS 440 + E+L A Sbjct: 416 GEVEYAFEQLAASAPRRRGASAPTPPRAPAASIASTEADAPFFDDAPPPARSAPPRGQAP 475 Query: 441 RPVPQLKR---TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQ-- 495 RP +R +T L+ L++Q+P A +P + + ++ GL L +++ C Sbjct: 476 RPRAGGRRKPPSTAGTLLRLVMQHPTWAARMP-VGLVPDDSPEGLALI-AIIDLCSLGEP 533 Query: 496 -PGLTTGQLLEHYRGTNNAATLEKLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQE 552 P G L+E +R T +A TL +++ + D+ + E F D+L + + Sbjct: 534 IPSGGLGALIERFRETPHAETLSRVAAELVEAEFDEAVVETLFEDALRKLQIDGVGKEIT 593 Query: 553 ELIARERTHGLSNEERLELWTLNQE 577 L+ R+R GL R L L E Sbjct: 594 ALLQRDREQGLDAAGRHRLGELLLE 618 >UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7_METFK Length = 576 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 237/580 (40%), Positives = 324/580 (55%), Gaps = 16/580 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPDSFIQELLNRVDIVDVIDRSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+AI F+M Y + FVE V ELA + VP E+ + L ++M Sbjct: 61 CGAHGSAIGFVMEYQGISFVEAVHELAKSVGMIVPQES-RPEDVVRAKVIPGLQEVMQQA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y+ L++ + A +YL+ RGLS +V RF IG+AP GW N+ F + L Sbjct: 120 ADYYRAELKK--SPRAIEYLKGRGLSGQVAGRFQIGYAPAGWQNLQAVFA--DYRHEVLQ 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHK 241 AG+++ N+QGR YDRFR+R+MFPI ++G+VIGFGGRVL + KYLNSPET +F K Sbjct: 176 TAGLVIENEQGRCYDRFRDRIMFPIHGQKGQVIGFGGRVLESADAGAKYLNSPETPLFQK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G++LYGL+ A++ E R LVVEGYMDVVALAQYGI+YAVA+LGT+TT HI L R T Sbjct: 236 GQELYGLFLARRAIREAGRALVVEGYMDVVALAQYGIDYAVAALGTATTPAHIAKLMRQT 295 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + ++ C+DGD AGR AAWRA ALP + DG +L F+FLP DPD+ VR+ GK+AFE Sbjct: 296 DEIVFCFDGDSAGRGAAWRAAMNALPVLKDGLRLSFLFLPAQHDPDSYVREFGKQAFEDL 355 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 M QAMPLS +L L L + + + + A P++ Q+ L + LR+ + I Sbjct: 356 MAQAMPLSQYLIQELSANNRLQSQEDKVQFLNEAEPILKQIQAPRLALLLRKRIAELADI 415 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRTTM---RILIGLLVQNPELATLVPPLENLDENK 478 D + +R P+ R TM R + + P L + Sbjct: 416 SSDEMRRMVKLPETNRQQTRSAPKQARVTMSLQRRFTLMAIMRPHLVQEGD--QQWMTGS 473 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA-EQTFTD 537 + R++V L P +L NA L L + D+++ E F Sbjct: 474 TDEDEMVRQVVKLALESPDAKPVAILHGLESVVNARLLPDLQRDLHLLDESLDFELEFDG 533 Query: 538 SLNHMFDSLLELRQEELIARERTHG---LSNEERLELWTL 574 + D L+ ++ + R + L+ EER L ++ Sbjct: 534 VRRQLKDMYLQRQKASAVDRLKEKNLSQLTEEERELLKSI 573 >UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EM4_THICR Length = 576 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 246/572 (43%), Positives = 349/572 (61%), Gaps = 17/572 (2%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 G IPR FI DLLAR DIV +I+ RV LKK G N+ ACCPFH+EKTPSF V+ +KQFYHC Sbjct: 6 KGTIPRSFIEDLLARADIVQVINQRVPLKKAGTNYKACCPFHDEKTPSFNVSAQKQFYHC 65 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCGA G+A+ FL +YD L FVE VE LAAM+ +EVP E + ++ + + LY +M Sbjct: 66 FGCGASGDALKFLTDYDGLSFVEAVETLAAMNGMEVPREKLTQKQAQQQQKTRDLYDVMH 125 Query: 122 GLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + FY+Q L+ P + A+ YL++RGL+ E+ F IGFAPPGWD+++ + +Q Sbjct: 126 SVAKFYRQQLKNHPTSEEAKTYLKQRGLTSEIAKEFVIGFAPPGWDSLVSNLKADATLKQ 185 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIF 239 L++ GML+ + G++YDRFR R+MFPIRD RGRVI FGGRVL + PKYLNSPET IF Sbjct: 186 QLVETGMLIQKEDGKTYDRFRHRIMFPIRDGRGRVIAFGGRVLSSEEQPKYLNSPETPIF 245 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYGLYE +Q + N +LVVEGYMDVVALAQ+GI AVA+LGT+ T +H+ ++FR Sbjct: 246 HKTVTLYGLYEMRQARQQVNHILVVEGYMDVVALAQFGIRNAVATLGTAITTEHLDIMFR 305 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 N V+ C+DGD AG+ AAW+ALE ALP M D R ++F+FL GEDPD+ VR+EG E F+ Sbjct: 306 QVNEVVFCFDGDEAGQKAAWKALELALPKMQDTRSIKFLFLDQGEDPDSTVRQEGVEGFQ 365 Query: 360 ARMEQAMPLSAFLFNSLMPQV--DLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 R++QAM LS FLF L+ ++ +ST +G+ +L LA P I+ PG L + L + Sbjct: 366 KRIQQAMTLSGFLFKGLIGRLGSPVSTVEGQQQLIALATPYITSAPGAMP-DLLTKVLSD 424 Query: 418 -------KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 +LG + ++ +A+ +PV + + LI LL+ AT+ Sbjct: 425 YVDVPVWRLGQIMGIRVSSTKQPSAKKKNEQPVRIKATSIVLRLIRLLMLRSHWATVFSD 484 Query: 471 --LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA-TLEKLSMWDDIAD 527 L+ L E+ + + ++ LE + G N A L+++ + Sbjct: 485 ELLQELQESHNAEFRFLAQSIQVLKQNAYISES--LESWLGEPNRAHVLKQVYAIVIQEN 542 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + E F + + L + + ++ + ++ Sbjct: 543 EAFIENEFKAIVLQIGSELKKEKDKKSLQKKL 574 >UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS Length = 652 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 230/431 (53%), Positives = 297/431 (68%), Gaps = 4/431 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP F+ DLLARTD+V+LIDARV LKK G+N+ ACCPFH EKTPSFTV +KQFY+ Sbjct: 1 MA-RIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGCGA GNA FLM Y+ L F E V++LA +EVP + ++ R Q+LY L Sbjct: 60 CFGCGASGNAAGFLMEYEHLNFPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDL 119 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FY Q L+Q P A YL+ RGLS E+ +FAIGFAPPG+DN++ + Sbjct: 120 LSRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGFAPPGYDNLINGLSLTETS 179 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + + G+LV + R+YD+FR+R++FPIRD RGR IGFGGRVLG+ PKYLNSPET Sbjct: 180 LEQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG++LYGL+E +Q +RL VVEGYMDV+AL Q+G+ VA+LGT+TT DH + L Sbjct: 240 VFHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR N VI C+DGD+AG AAWRALE+ LP + DG+Q+RF+FLPDGEDPDTLVR++G EA Sbjct: 300 FRQVNEVILCFDGDKAGVRAAWRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEA 359 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 A ++A LS +LF L +DL T DGR RL+ LALP + + G R L +EL Sbjct: 360 LRALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYLDKPAGPVYRALLTEELSR 419 Query: 418 KLGILDDSQLE 428 + +S ++ Sbjct: 420 LTRLDKESLIQ 430 >UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J438_COXB2 Length = 572 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 229/564 (40%), Positives = 338/564 (59%), Gaps = 14/564 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI DLL+RTDIV+LI +RV +KK+G N+ CPFH EKTPSFTV+ KQFY+ Sbjct: 20 MNKRIPQSFIQDLLSRTDIVELIQSRVAIKKRGANYLGLCPFHTEKTPSFTVSSSKQFYY 79 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAI FLM +D++EF+E V +LA +E+P E E + + L+ Sbjct: 80 CFGCAAHGNAISFLMAFDRMEFLEAVTDLANQLGIEIPHETIGQSKTAEINDD---FVLL 136 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ FYQ+ L++ + +A YL+ RGL+ E +FAIG+AP W+N+ + F N + + Sbjct: 137 TTISRFYQRELKR--SPTAIHYLKSRGLTGETAKQFAIGYAPNAWENL-RPFAKNSKTQS 193 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ G+LV + R +DRFR R+MFPIRD RGRVI FGGR +G D PKY+NSPET +F Sbjct: 194 QLVTHGLLVKKEN-RCFDRFRHRIMFPIRDVRGRVIAFGGRSVGEDLPKYMNSPETPLFQ 252 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG +LYGL+EA + + R L+VEGYMDVV+L Q+GI YAVA+LGT+T+ H+Q L R Sbjct: 253 KGNELYGLHEACKTHRPLPRALIVEGYMDVVSLHQHGITYAVATLGTATSVRHLQKLLRY 312 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+ +I C+DGD AGR AAWRAL +ALP M +G +RF+FLP GEDPD+L++K G+EAFE Sbjct: 313 THEIIYCFDGDDAGRQAAWRALTSALPVMREGIHIRFLFLPQGEDPDSLIQKIGREAFEN 372 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +++QA PLS F+ L ++ + + D +A + AL + +P L +EL +L Sbjct: 373 KIDQAPPLSEVFFSHLQKEIPIRSIDDKAAFAKQALEHLRPMPRGIFYQLLLEELAQRLT 432 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 + + S VP L + +L Q P L +++ + + +++ P Sbjct: 433 LDLSELDSLTVAPPPMPAASTRVPSLAYHA----LSILAQAPSLVSVIQDM-TIPKSEDP 487 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 + ++V +P TG+LL + + L +L+ + ++ D++N Sbjct: 488 QIQFLAKMVLFLKKRPVANTGELLA-FCPESQRRLLAQLAAYKTGLSEDDLAAELKDAIN 546 Query: 541 HMFDSLLELRQ-EELIARERTHGL 563 + + + + LI L Sbjct: 547 RLHEQHQKEEAFQALIKASHKETL 570 >UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV Length = 583 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 240/584 (41%), Positives = 336/584 (57%), Gaps = 20/584 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ F+ DLL R D+ +LI +R+ LKK G N+ ACCPFH+EKTPSF V +K FYH Sbjct: 1 MSGLIPQRFVEDLLDRIDLAELIGSRITLKKAGANYKACCPFHDEKTPSFNVRPDKGFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F+ ++ L F E VEELA LEVP++ ++ E Q +TL + Sbjct: 61 CFGCGAHGDAISFVREFEGLGFTEAVEELAKRAGLEVPYDRA---AKQEMQQARTLTDAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + N FY +L AR YL++RGL +I ++ IGFAP + + + Sbjct: 118 EFANRFYHSALTSQQGGYARDYLKQRGLDENIIQQYQIGFAPGTGTALYDAAPKD--LKA 175 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 LI+ V++ GR D FR RVMFPIR+ RG+ I FGGR LG+D KY+NSPE+D+FH Sbjct: 176 PLIET-RTVSDQYGRPRDLFRNRVMFPIRNTRGKTIAFGGRTLGDDKAKYINSPESDVFH 234 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R++YGL+EA+Q + ++LLVVEGYMDV+ALAQ+GI+YAVA+LGT+T D + L R Sbjct: 235 KSREIYGLFEARQAIRQLDKLLVVEGYMDVIALAQHGIHYAVATLGTATNQDSLTALLRH 294 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 +++ C+DGD+AG AA RA+E AL M DG L+F+ LP+GEDPDTLVRKEG +AF+ Sbjct: 295 VRHIVFCFDGDQAGFRAADRAMENALELMADGLHLQFLMLPEGEDPDTLVRKEGPDAFQK 354 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+E A P S +LF+ +DL P+ R L PL++++P TLR + E+ G Sbjct: 355 RIEGATPFSRYLFDRQSEGLDLQLPEHRGELRARVEPLLNKMPRSTLRDAMWHEMLRLCG 414 Query: 421 ILDDSQLERLMPKAAE-----SGVSRPVPQ---LKRTTMRILIGLLVQNPELATLVPPLE 472 + Q + G SRP + +K + L L++ PELAT V L Sbjct: 415 GRNQWQNRQQGRNYKARGWRGEGQSRPTEERIDVKLSKDSTLCLALLEAPELATEVKALA 474 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + R L+ + + T + L TN A +++D++ E Sbjct: 475 DSTRQLERAGRFARWLL-----EEKIQTRKTLVAGLATNKQARDRFYNLFDELEHIPARE 529 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHG-LSNEERLELWTLN 575 T + + + RQ+ L R LS EER EL TL+ Sbjct: 530 STLAAARELLSPNEEAARQQRLATLLRNLAQLSPEEREELRTLS 573 >UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA Length = 800 Score = 533 bits (1372), Expect = e-150, Method: Composition-based stats. Identities = 247/619 (39%), Positives = 344/619 (55%), Gaps = 49/619 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP F+ DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 177 IPHSFLQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 236 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG------------SGPSQIERHQ 112 GAHG AI FLM + L F E V+ELA L VP E P+ + + Sbjct: 237 GAHGTAIGFLMEHAGLTFPEAVQELAQSVGLTVPHEPSMRGGGGGGGGGGDYPAPVSKSV 296 Query: 113 RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L M +Y++ L+ AT A QYL+ RGL+ E+ ARF +G+AP GW N+ F Sbjct: 297 ATALSDAMTAACDYYRKQLRG--ATVAIQYLKNRGLTGEIAARFGLGYAPDGWQNLEAAF 354 Query: 173 GGNPENRQSLIDAGMLVTNDQG------RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND 226 +SL++AG+++ +++ R YDRFRER+MFPIR+ +G+VIGFGGRVLG+ Sbjct: 355 --PDYRDESLVEAGLVIVSEKTDAQGVARRYDRFRERIMFPIRNVKGQVIGFGGRVLGSG 412 Query: 227 TPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLG 286 PKYLNSPET +F+KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+LG Sbjct: 413 EPKYLNSPETPLFNKGSELYGLFEARLAIRERKYVLVVEGYMDVVALAQLGFPNAVATLG 472 Query: 287 TSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDP 346 T+ T H+Q L R T+ VI +DGD AGR AA RALE LP+ D R +RF+FLP DP Sbjct: 473 TACTPIHVQKLLRQTDTVIFSFDGDSAGRRAARRALEACLPHAGDNRTIRFLFLPTEHDP 532 Query: 347 DTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 D+ VR+ G EAF ++E+AMPLS FL N + L P+GRA+ A PL+ +P Sbjct: 533 DSYVREFGAEAFSEQVERAMPLSQFLLNEAIAGKALDQPEGRAKALFDAKPLLQALPANA 592 Query: 407 LRIYLRQELGNKLGI--LDDSQLERLMPKAAESGVSRPVPQLKR---TTMRILIGLLVQN 461 LR + ++L I + + L + + A P +R + + + LV + Sbjct: 593 LRAQIMHMFADRLDIPFEEVAALSDVDTRIATPPRQAPARSERRRVTDSEKRALRTLVMH 652 Query: 462 PELATLVPPLENLDENKLPGLG-LFRELVNTCLSQPGLTTGQLLEH-YRGTNNAATLEKL 519 P +A+ + + LP +G LF E+V+ + +LL R ++N AT E++ Sbjct: 653 PRIASQLDDEQIATLRALPRIGELFAEVVDHARALGDGAEFRLLSDVLRTSSNGATYEEI 712 Query: 520 SMWDDIADKNIAEQTFTD----------------SLNHMFDSLLELRQ----EELIARER 559 D+N+ + + + + ++L++R + L R Sbjct: 713 FREILDYDENVRDLLLQNPEDETVPERQREQERIAGEELQAAVLKMRYDACCDRLDRLAR 772 Query: 560 THGLSNEERLELWTLNQEL 578 + EE EL LNQ+ Sbjct: 773 QSTFTPEELAELTELNQQR 791 >UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7_RALEJ Length = 604 Score = 531 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 236/602 (39%), Positives = 333/602 (55%), Gaps = 26/602 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT---LYQLM 120 CGAHG+AI FLM Y + E V ELA + VP E P Q+ L M Sbjct: 61 CGAHGSAIGFLMEYSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN-- 178 FY++ L+ A A QYL+ RGL+ E+ A+F +G+AP W + FG ++ Sbjct: 121 SRATEFYRRQLRG--APQAIQYLKGRGLTGEIAAQFGLGYAPDDWQGLEAVFGSYRDDTI 178 Query: 179 RQSLIDAGMLVTNDQGRS-------YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYL 231 L++AG+L+ + + R YDRFR+R+MFPIR+ +G VIGFGGRV+G PKYL Sbjct: 179 AAPLVEAGLLIESSEKRDADGKPRRYDRFRDRIMFPIRNTKGAVIGFGGRVIGQGEPKYL 238 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPET +F KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+LGT+ T Sbjct: 239 NSPETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTP 298 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 H+Q L R T++V+ +DGD AGR AA RALE LP++ D + +RF+FLP DPD+ VR Sbjct: 299 VHVQKLLRQTDSVVFSFDGDAAGRRAARRALEACLPHVADNKAIRFLFLPAEHDPDSYVR 358 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +EG EAF A++ AMPLS FL ++ + D+ P+GRAR A PL+ +P LR+ + Sbjct: 359 EEGTEAFAAQVRDAMPLSRFLLQAVTEEQDMRQPEGRARAQYEAKPLLQAMPACGLRLQI 418 Query: 412 RQELGNKLGI--LDDSQLERLMPKAAESGV-SRPVPQLKRTT----MRILIGLLVQNPEL 464 +EL + G + + L A +G ++P P+ KR + ++ LL+ P L Sbjct: 419 IRELADATGTTPAEIEAICGLRSDPARAGRFAQPRPRAKRQAPTGLEQRVLQLLMCYPSL 478 Query: 465 ATLVPP--LENLDENKLPGLGLFRELVNTCLS-QPGLTTGQLLEHYRGTNNAA--TLEKL 519 A + L + + + LV C + + EH + A + Sbjct: 479 AARLDEDSRALLLDPEGADAEVLAHLVAACDEVEGQVNFAAFSEHLAQSPYAEMYAAART 538 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 ++ + ++ A Q F ++ + L E L A + + + L E+ Sbjct: 539 AVLREEIEEEPATQEFDAAVTKLLAEPLSRELERLQAAVIAGTADEDGKQRMRWLVGEIH 598 Query: 580 KK 581 ++ Sbjct: 599 RR 600 >UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPB4_9FIRM Length = 606 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 194/604 (32%), Positives = 296/604 (49%), Gaps = 38/604 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F++ + + DIV +I V LKK+G+N+ CCPFH+EKTPSF+V EK F++CFGC Sbjct: 7 DDFVDRVRSECDIVSVISDYVPLKKKGRNYWGCCPFHHEKTPSFSVTPEKGFFYCFGCQT 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 GN +FLM + + F E V++LAA N+ +P S + +LY + + F Sbjct: 67 GGNVFNFLMKIENISFFEAVKKLAARLNIPLPEREKSPAEIARERELASLYLANEYASEF 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L + + AR+YL RG+S ++I F +GFAPP WD +++ + + L+ A Sbjct: 127 FHACLTKTNMGRVAREYLASRGISDDIIRNFKLGFAPPAWDKLVQALTRRGLSEELLLKA 186 Query: 186 GMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+++T +G YDRFR RVMFPIRD RGRV+GFGGRVL + +PKYLNSP+T +F+K Sbjct: 187 GLVLTRPRGDGIYDRFRNRVMFPIRDARGRVVGFGGRVLDDSSPKYLNSPDTLLFNKRHL 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR-ATNN 303 LYGL A + E +++VVEGYMDV+ ++G VASLGT+ T + LL R + + Sbjct: 247 LYGLDAAIRSIKESGQVIVVEGYMDVITAHRFGFTNVVASLGTAFTPEQAGLLERCSVSQ 306 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ YD D AG+ A +RAL T G ++ + +P+G+DPD +R+ G EAF + Sbjct: 307 VLFAYDSDAAGQSATFRALAT---VRERGFNVKVVSIPEGKDPDEFLRRHGPEAFARVVA 363 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QAMP + + +D ST +G+ + + LP+++ V L KL I + Sbjct: 364 QAMPFVDYQLQQALESIDYSTLEGKVAVVSKILPVLASVGNAVEVNGHIARLAQKLNIDE 423 Query: 424 DSQLERLMP--------KAAESGV-----------SRPVPQLKRTTMRILIGLLVQNPEL 464 + K G ++ R LI L+ + + Sbjct: 424 SAIRTEYAKYIHQYKKDKIVNKGNNINSHHNFVKFAKGPEAATVAAERQLIRLMCDDGAV 483 Query: 465 ATLVP-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 V L D + + R + + L L T NA + + + Sbjct: 484 IPYVQVQLAVEDFSDSARQEIVRRIFMVNDAGEKLEPAALAMGLSETANAELSHIMLIDE 543 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS-------NEERLELWTLNQ 576 AD + D L + + L+ E+ R + L EE E +N Sbjct: 544 QCAD---VTKVVDDCLKTIRLARLKALYEQ--HRLKADELERMGDSRFQEELAESKRIND 598 Query: 577 ELAK 580 E+ K Sbjct: 599 EIKK 602 >UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS Length = 666 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 223/470 (47%), Positives = 310/470 (65%), Gaps = 8/470 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP FI++LLARTD+ D++ +R+ LKK G+N+ A CPFHNEK+PSF++N KQFY+ Sbjct: 1 MAGRIPDQFIDELLARTDLTDVVASRISLKKTGQNYSALCPFHNEKSPSFSLNPNKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M +D L+FV+ +E LA +EVP E G+ Q L + + Sbjct: 61 CFGCGAGGNAISFVMEHDHLDFVDAIEVLAKDAGMEVPREQGAPD---RYEQNAELLKRL 117 Query: 121 DGLNTFYQQSL-QQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FYQQ L Q P A YL + RGLS ++ F +G+APPGWDN+LK+ G E+ Sbjct: 118 SESSQFYQQQLTQHPDKKKATDYLSKDRGLSGQIAKVFGLGYAPPGWDNLLKKVGTRAES 177 Query: 179 RQSLIDAGMLVTNDQ--GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 ++ L+ GML+ G YDRFR+R++FPIRD RGRVI FGGR G++ PKYLNSPET Sbjct: 178 QEQLLLGGMLIEKKDQPGHYYDRFRDRIIFPIRDSRGRVIAFGGRAFGDEKPKYLNSPET 237 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F K ++LYGL+EA+Q+ ++++VVEGYMDV+ LAQ+GI AVA+LGTS + HI+ Sbjct: 238 PVFQKSQELYGLFEAKQNTPILDQIIVVEGYMDVIVLAQHGITNAVATLGTSVNSQHIRK 297 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 LF+ + VI C+DGD+AGR AA R LE +LP M D +Q+RF+FLP+GEDPD+LVRKEGKE Sbjct: 298 LFKLVSKVILCFDGDKAGRAAAIRGLEASLPVMQDEKQVRFLFLPEGEDPDSLVRKEGKE 357 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQEL 415 AF R+E A LS LF+ QV L +G A+ + A+ +I Q+P E T R L ++L Sbjct: 358 AFNHRLEDASSLSHVLFDHARNQVTLGDEEGEAQFARNAMEMIKQIPKELTFRSVLIRQL 417 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELA 465 ++ GI ++ + + S ++ + + P+L+ Sbjct: 418 SDQSGIDSETLSNTVFKTRRQHTPSEGHEPTHQSHAQQIQHYDGDTPDLS 467 Score = 43.8 bits (102), Expect = 0.019, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 4/144 (2%) Query: 442 PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTG 501 P + ++ L+ +P +A + + L L +F ++ P TG Sbjct: 521 PPAAPSLSRIKQASLCLLLHPHIAKEIDLPDPLVNQANEELQIFCKIWRYFAKHPYKNTG 580 Query: 502 QLLEHYRGTNNAATLEKLSMWDDIADK---NIAEQTFTDSLNHMFDSL-LELRQEELIAR 557 LL +++ L D K A+Q D + + +L L L ++ Sbjct: 581 HLLGELTDKTTISSIYTLLNHQDATTKQKITNAQQEVLDMVLALEKNLGLNSSIARLKSK 640 Query: 558 ERTHGLSNEERLELWTLNQELAKK 581 + + EL L + +K Sbjct: 641 GNESIKDSSSKQELRNLMDLIRQK 664 >UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB92_9GAMM Length = 611 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 228/540 (42%), Positives = 325/540 (60%), Gaps = 21/540 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I FINDL + DIVDLI+ RV LKK GK++ ACCPFHNEKTPSFTV +KQ+YHCFGC Sbjct: 4 INNDFINDLSNQVDIVDLINRRVPLKKAGKDYKACCPFHNEKTPSFTVVADKQYYHCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G +GNAIDF+M +D L F+E VE +A + V ++ + P + + LM ++ Sbjct: 64 GENGNAIDFVMKFDHLNFIEAVEVVAGESGVSVVYDQNARPVDP---KMKRYRDLMQEVS 120 Query: 125 TFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FYQ L+ P Y + RGL+ E+ RF +GFAPPGW ++ F N E + L Sbjct: 121 EFYQSQLKKSPAKKKVVTYAKNRGLTGEIAKRFDLGFAPPGWSSLFDHFKHNLEVVKDLE 180 Query: 184 DAGMLV--TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFH 240 + G+LV +G YDRFR+R+MFPI + +G +I FGGRVL D PKYLNSPET IFH Sbjct: 181 EMGLLVAKKEKKGEYYDRFRDRLMFPIHNAKGDIIAFGGRVLSEEDKPKYLNSPETPIFH 240 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R+LYGL+ A++ + + +LVVEGYMDVVAL Q GI VA+LGT+TT +H+Q L R Sbjct: 241 KSRELYGLHHARKHSRSIDYILVVEGYMDVVALHQSGITCTVATLGTATTPEHLQTLSRT 300 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+ +I C+DGDRAGR AAW+AL+ ALP + G ++F+FLPDGEDPDTLV+KE +AFEA Sbjct: 301 TDTIIFCFDGDRAGRAAAWKALQIALPVIKSGLIVKFLFLPDGEDPDTLVKKESSKAFEA 360 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+E++ PLS FLF+ + +VD T +G+ LI QV +T + L + + ++G Sbjct: 361 RIEKSHPLSKFLFDHIKVEVDFDTIEGKTLFLEKVSILIQQVEYDTYQQQLIEGVAQEVG 420 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATL--VPPLENLDENK 478 + Q++R++ + + +P LK +T ++G + P+ + + Sbjct: 421 QSVE-QVKRVLSQ-------QKLPPLKPSTPAPIVGEEMPVPDFPDFPDFSLSKPIVVKN 472 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRG----TNNAATLEKLSMWDDIADKNIAEQT 534 GL +++ L+ P L+ G + R A L +L+ + ++ Q Sbjct: 473 NNAKGLMSKMITLLLNYPSLSDGTVEVRIRDLKKMDKKFAVLLELTRSSQMIEQENNFQE 532 >UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF7_9GAMM Length = 656 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 228/444 (51%), Positives = 304/444 (68%), Gaps = 4/444 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVK-LKKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRIP+ FI+DLLAR +I+D++D RV+ LK+ GKN+ CPFH EKTPSFT N EKQFY Sbjct: 1 MAGRIPQHFIDDLLARINIIDVLDGRVQKLKRTGKNYSGLCPFHKEKTPSFTANQEKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGCGA GNA+ FLM+Y+ L F E VEELA +EVP + S + + LY+L Sbjct: 61 YCFGCGAGGNALGFLMDYENLNFPEAVEELAKTAGMEVPRD-DSPQQREHDLRLSKLYEL 119 Query: 120 MDGLNTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + +++Y+ L+ SA YL+ RGLS + F+IGFAP GWDN+L G + E Sbjct: 120 LKAASSYYEDQLRSHQTRESAVNYLKSRGLSGQAAKAFSIGFAPSGWDNILNHLGKSEEE 179 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 Q L ++G+L+ N+ + YDRFR R+MFPIRD+RGRVIGFGGRVLG+D PKYLNSPET Sbjct: 180 IQLLEESGLLIHNEERDSRYDRFRNRIMFPIRDQRGRVIGFGGRVLGDDKPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 FHK R+LYGLYEA++ N + RL++VEGYMDVV LAQ+ I+YAVA+LGT+TT+ H++ L Sbjct: 240 TFHKSRELYGLYEARKHNQKLERLIIVEGYMDVVGLAQFDIHYAVATLGTATTSQHLERL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 F+ VI C+DGD AGR+AA RAL+T LP + DG++ RF+FLPDGEDPD+LVR+EGKE Sbjct: 300 FKIVPEVIFCFDGDNAGREAAMRALKTTLPVIEDGKEARFLFLPDGEDPDSLVRQEGKEN 359 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE R+ A PLS F F DL + DGRAR ST LP I+ + L+ + ++ Sbjct: 360 FENRISTAQPLSEFFFKCHSEGADLDSMDGRARFSTEVLPAINSMKTSLLQQMMLDKICE 419 Query: 418 KLGILDDSQLERLMPKAAESGVSR 441 + + + + + ++ Sbjct: 420 LTHLSLEQIQTAINFRESVQEPAQ 443 Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 59/149 (39%), Gaps = 8/149 (5%) Query: 428 ERLMPKAAESGVSRPVPQ-LKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFR 486 + + + +P P+ + + + L+ LL+ P+LA+ E + + + Sbjct: 493 KNYKQRDGKPRSFQPPPRNTELSFAQKLVSLLLHFPKLASEYRLPEGTELINDSNIKILS 552 Query: 487 ELVNTCLSQPGLTTGQLLEHYRG----TNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 +LV+ P + GQL+ +R + L ++S +I + D+L + Sbjct: 553 QLVDYYSRNPDSSLGQLVVDWREDAALSETIVQLYEISSSLEIKSEAEGRVYLNDALKEL 612 Query: 543 FDSLLELRQEELIARERTHGLSNEERLEL 571 +E L ++ H L EE+ L Sbjct: 613 ELKAIEADVSSL---QKKHELKAEEKQRL 638 >UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum RepID=A3DDV1_CLOTH Length = 600 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 183/591 (30%), Positives = 302/591 (51%), Gaps = 33/591 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I ++ DI+ ++ VKL+++GKN+ CPFH+EKTPSF+V+ KQ Y+ Sbjct: 1 MYKYYPEELIEEIRMSNDILSVVGEYVKLERKGKNYFGLCPFHSEKTPSFSVDPNKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+++E V+ LA +++P E + +I ++Q L ++ Sbjct: 61 CFGCGKGGSVIQFVMEVENLDYIEAVKMLAERARIQLP-EGDNEEERIIARKKQELLRIN 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ + L + R+YL KR +S + +F +G++P WD + + + Sbjct: 120 VEAARFFYEQLNDKKNLAPREYLTKRKVSGSIARKFGLGYSPEEWDALYNHLRKKGYDDE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+D+G+++ G YDRFR R++FPI D RG VIGFGGRVL N TPKY+NSPET +++ Sbjct: 180 ILLDSGLILKGKNGGYYDRFRGRIIFPIFDLRGNVIGFGGRVLDNSTPKYMNSPETLVYN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYGL A+ N+ R++VVEGYMDV++L Q+GI VASLGT+ T ++L + Sbjct: 240 KRKNLYGLNFAK--NSGQKRIIVVEGYMDVISLFQFGIINTVASLGTALTESQGRILKKY 297 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 +I YD D AG A R L+ G ++ + +P+G+DPD V+K G EAF Sbjct: 298 AEEIIISYDADTAGMAATMRGLDLLNDI---GCNVKVLIIPEGKDPDEFVKKNGPEAFNK 354 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +E A+ L + +L +D +T +G+ A L+S++ R +++ + Sbjct: 355 LVENALSLVEYKIKALKSTIDTNTTEGKINFLNKAADLLSKIDNNMEREMYIKKISKEYD 414 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQL-----------------------KRTTMRILIGL 457 I +S ++ + V +P+ + R+L+ L Sbjct: 415 ISQESIYAEILKRIKPKTVYKPLTRTLTAKNDNNRLKIEKNGKKSSYDKIIECERMLLCL 474 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELV-NTCLSQPGLTTGQLLEHYRGTNNAATL 516 L + L +V +DE K ++V + G+ +L+ + G + Sbjct: 475 LSIDNSLYKVVKDKIIVDEFKDEQNKEIAKIVFKRFEEKKGIVPAELI-NLAGEETSGVF 533 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 +L + D NI + D + M LE RQ+E++ + + LS E+ Sbjct: 534 ARLIQGECNFDDNI--KAVMDIIKKMELYRLEDRQKEILQQLSSGNLSTED 582 >UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBL4_DESAA Length = 599 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 183/594 (30%), Positives = 288/594 (48%), Gaps = 26/594 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I+ + +IVD+I + LKK G NF CPFH EKTPSF+VN ++QF+H Sbjct: 1 MARFSPDDQISHVRNSVNIVDVISDYMVLKKAGNNFVGLCPFHAEKTPSFSVNPDRQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ DF+M + L F E + LAA +E+ + Q +R LY Sbjct: 61 CFGCGEGGDVFDFVMRQNNLTFPEALASLAARAGIELAPRKMTPQQQKIVAERDALYAAN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D F+ +SL P A+ AR+YL+KR + EV+ F +GFAP W + G Sbjct: 121 DFARDFFVKSLNAPQASQAREYLKKREMPQEVLETFMLGFAPDEWRALSGFLQGKGVPSH 180 Query: 181 SLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 AG+LV + G YDRFR R++FPI D GR+ GFGGRV+ + PKYLNSP+T I+ Sbjct: 181 RAEKAGLLVHKEGGGNVYDRFRNRIIFPIHDISGRIAGFGGRVMDDALPKYLNSPQTPIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R LYGLY+A+Q+ + +VEGY DV+AL +GI AVA+ GT+ + DH++++ Sbjct: 241 DKKRMLYGLYQARQECRKTGVAFMVEGYFDVLALYAHGIRNAVATCGTALSPDHVRIIKG 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ +D D AG +AA ++L + + Q + + LP G DPD+ VR G + F Sbjct: 301 YAKKVVLVFDSDTAGINAARKSLPL---FEAEKVQAKVLVLPAGHDPDSFVRDFGAKDFL 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 E + FL S + + LS +G+A + ++ V R +++ KL Sbjct: 358 EAAENRQDMIPFLMESAIARHGLS-IEGKANVVAEIKEQVAAVSDGVTRSLYIKQIAEKL 416 Query: 420 GILDDSQLE----------RLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVP 469 G+ + + L+ + +P ++P ++ ++V+ PE A V Sbjct: 417 GVDEAAVLDAVRDAAKTRPKRLPGTVHEEQAKPAEPAPDRMETAILQMMVRCPECAPKVA 476 Query: 470 P---LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 ++ N++ LGL ++ + ++ ++ + L ++ DD Sbjct: 477 EKRLIKYFSSNRVRALGL--RILEFIQAGGDPEGAGIMSLAVEQDDRSLLARILAHDDPL 534 Query: 527 DKNI---AEQTFTDSLNHMFDSLLELRQEELIARERTHG---LSNEERLELWTL 574 + F S+ + L+ R ++ L E+ L L Sbjct: 535 ELPGCMAIIDQFEQSITRRNHAELDRRIQQAQTEGHHDLALRLLVEKNELLKAL 588 >UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PRIM_BACHD Length = 599 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 182/604 (30%), Positives = 287/604 (47%), Gaps = 33/604 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I ++ DI+D+I V+LKKQG+N+ CPFH E TPSF+V+ +KQ YH Sbjct: 1 MNQRIPQETIEEIRRSVDILDVIGEYVQLKKQGRNYIGLCPFHGENTPSFSVSPDKQLYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA FL + FVE VE LA N+ +P PS + + L + Sbjct: 61 CFGCGAGGNAFTFLEQIEGFTFVEAVETLAKRANVVLPERVS--PSVKQNRDEELLISIQ 118 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ L + R YLE+RG + E I F IGFAPP WD + + Sbjct: 119 EFAAKFFHHVLMLTEEGKAGRTYLERRGFTKEQIEHFQIGFAPPHWDALTNVLAKRDVDL 178 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + ++G+LV + G+ YDRFR RV+FPIR+ +G+++ FGGR LG+D PKYLNSPE+ I Sbjct: 179 KKAGESGLLVERESDGKRYDRFRNRVIFPIRNGKGKIVAFGGRTLGDDKPKYLNSPESPI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ LYG Y+A+ + N ++ EGY+DV+A + G+ VA+LGTS T + +++ Sbjct: 239 FQKGKLLYGFYQARPAIRKENEAVLFEGYVDVIAAWKAGVTNGVATLGTSLTEEQARMIR 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C DGD AG +A +R+ + +G ++ +PDG DPD ++K G E F Sbjct: 299 RNAETVIICNDGDAAGAEATFRSADLL---QQEGCHVKVAMIPDGLDPDDYIQKYGAERF 355 Query: 359 EA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + +++ L F +L R + I+++ R + ++L Sbjct: 356 KKDVIGESLTLMKFKMKYFRMGRNLQNEGERILYIEEIIKEIAKLSKAVERDHYLRQLAE 415 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLK--------------------RTTMRILIGL 457 + + D+ + E V Q K + RIL+ Sbjct: 416 EFSLSLDALKQEQYRIYREMKRQNQVSQGKTNTVRQKKHDFEQKRLLPAYQNAERILLAH 475 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 +++N +A V N + L ++ Sbjct: 476 MMRNVSVAETVQERLGGRFNVDHYQAIVAHLFAYYAEGFEPDPCTFIQRLEDQELIRVAT 535 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHM--FDSLLE-LRQEELIARERTHGLSNEERLELWTL 574 +L+M + ++ I +Q D + + + LE + E + +E L + EL + Sbjct: 536 ELAMLE--INEEINDQELNDYIEKIEMYPKWLELQQIESALKKETDPVLYATRKQELINM 593 Query: 575 NQEL 578 ++L Sbjct: 594 KKQL 597 >UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKT6_MOOTA Length = 605 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 187/590 (31%), Positives = 287/590 (48%), Gaps = 24/590 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M + I+++ R DIV++I V+LKK+G+++ CPFHNEKTPSFTV+ +KQ ++ Sbjct: 1 MTTAFNQDVIHEVKDRIDIVEIIGGYVQLKKRGRSYVGLCPFHNEKTPSFTVSPDKQVFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G+ + FLM + L F E + LAA +E+ E + ++ +R ++ LY+L Sbjct: 61 CFGCGAGGDVLTFLMKREGLSFPEALAALAARAGVELVGEEETPAARRQRELKERLYRLG 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +FY + L + P AR YL++RG+ +F +GFAP ++ Sbjct: 121 AIAASFYYRILARHPAGAPARSYLQRRGIKGVTARQFELGFAPDAGAVLVNYLQRQGFTP 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + + AG+ ++ DRFR R+MFPI+D R RVIGFGGRVLG PKYLNSPET +F Sbjct: 181 EEIEQAGLSLSRPPRGLVDRFRGRLMFPIKDSRSRVIGFGGRVLGEGQPKYLNSPETILF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG L+GL+ + + R ++VEGYMD++A Q+GI+ VASLGTS T + L + Sbjct: 241 HKGHHLFGLHLSLPGIRKEGRAILVEGYMDMIAAWQHGIDNVVASLGTSLTPAQARELKK 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 VI YD D AG+ A R L+ G Q+R + LP+G+DPD + G EAF Sbjct: 301 YAREVIIAYDADTAGQAATLRGLDIL---AAAGLQVRVLQLPEGKDPDEFLAARGPEAFR 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + + L F + + + D T GR + T LP + QV + + L Sbjct: 358 ELVAGSQGLMEFRIHKAVSEHDAGTAAGRKAIMTALLPYLRQVRDAVEQETYARLLNRYT 417 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLK----------RTTMRILIGLLVQNPELATLVP 469 GI + + L + A + ++ L+ + +P LAT + Sbjct: 418 GISETAILNDIRRPEARLDRAVKTTYIRDGRAGGTAAPHQAELFLLRAYLASPALATRID 477 Query: 470 PLENLDE-NKLPGLGLFRELVNTCLSQPGLTT---GQLLEHYRGTNNAATLEKLSMWDDI 525 + L + P LT +L R A L +L++ +D+ Sbjct: 478 AELGENWCRDQAARDLVAAVRERRRENPELTGPDLAGILTPGREPQQEALLARLTLAEDL 537 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEEL---IARERTHGLSNEERLELW 572 E+ ++ + L + + L +AR G E+ EL Sbjct: 538 GPVE--ERAVNKAIRLLKLQQLRRQSKSLWLALARAEDTG-DQEQVRELQ 584 >UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6J0_LEPCP Length = 598 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 209/456 (45%), Positives = 279/456 (61%), Gaps = 13/456 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLLAR DIV ++ V+LKK G N+ CPFH EK+PSFTV+ KQFYHCFG Sbjct: 1 MIPQGFIQDLLARADIVAVVGRSVQLKKTGANYSGLCPFHAEKSPSFTVSATKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE----RHQRQTLYQL 119 CGA+GNAI FLM + FV+ V ELA VP E S + + R Q+ TL +L Sbjct: 61 CGANGNAIGFLMEASGMTFVDAVHELAQEVGATVPEENTSPEQREKAAQARAQQLTLTEL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 Y++ L+ + A YL++RGL+ E+ ARF +G+APPG + F + Sbjct: 121 QAQAAAHYRKQLK--ASPKAIDYLKRRGLTGEIAARFGLGYAPPGHHGLASAFAR--YDD 176 Query: 180 QSLIDAGMLVTND--QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 L+++G+++ ++ R +DRFR+R+MFPIR+ +G +IGFGGRVL + PKYLNSPET Sbjct: 177 PLLVESGLVILDEGQDQRRHDRFRDRIMFPIRNVKGEIIGFGGRVLDDSKPKYLNSPETP 236 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KG +LYGLYEA+Q + +LV EGYMDVVALAQ G + AVA+LGT+ TADH+Q L Sbjct: 237 VFVKGHELYGLYEARQAIRQRGHVLVTEGYMDVVALAQLGFDQAVATLGTACTADHVQKL 296 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+ V+ +DGD AGR AA RA+E LP+ TD R RF+FLP DPD+ VR EG EA Sbjct: 297 VRHTDQVVFSFDGDNAGRRAAMRAMEAVLPFATDTRSFRFLFLPAEHDPDSYVRAEGAEA 356 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE R+ +A+PLS+ + DL TP+GRARL A PL +P LR+ + E Sbjct: 357 FERRIAEALPLSSQMLQVAGADCDLVTPEGRARLVAQAEPLWRALPAGVLRMQMVNEFAQ 416 Query: 418 KLGILDDSQLERLM---PKAAESGVSRPVPQLKRTT 450 + R P+A +P +T Sbjct: 417 VAQLNAADLAARWGAGPPRAPAQSQEQPYAPSYPST 452 >UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK Length = 600 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 175/586 (29%), Positives = 277/586 (47%), Gaps = 26/586 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + + +DIV++I V+L+KQG+N+ CPFH E +PSF+V+ +KQ +H Sbjct: 1 MGNRIPEEVVEQIRTSSDIVEVIGEYVQLRKQGRNYFGLCPFHGENSPSFSVSSDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH---QRQTLY 117 CFGCG GN FLM + L F E V++L + + V Q + + Sbjct: 61 CFGCGEGGNVFSFLMKMEGLAFTEAVQKLGERNGIAVAEYTSGQGQQQQEDISDDTVIMQ 120 Query: 118 QLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 Q + L +Y L A YL KRG++ E+I +F IG+A WD K Sbjct: 121 QAHELLKKYYHHLLVNTEEGNEALSYLLKRGITKEMIEKFEIGYASQAWDAATKILQKRG 180 Query: 177 ENRQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPE 235 + S+ AG+LV ++ G YDRFR RVMFPI +G+VI F GR LG+DTPKYLNSPE Sbjct: 181 LSLSSMEQAGLLVRSEKDGSHYDRFRGRVMFPIYTLQGKVIAFSGRALGDDTPKYLNSPE 240 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + LY ++A+ + ++++ EGY DV+A + G+ AVA++GT+ T + + Sbjct: 241 TPIFYKSKLLYNFHQARPFIRKRGQVVLFEGYADVLAAVKSGVEEAVATMGTALTEEQAK 300 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 LL R V+ CYDGD+AGR+A +A + L G Q++ LPD DPD V++ G Sbjct: 301 LLRRNVETVVLCYDGDKAGREATMKAGQLLLQV---GCQVKVTSLPDKLDPDEYVQQYGT 357 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AFE ++ ++ F N L +L G+ L +S + + L Sbjct: 358 TAFENLVKSSISFVGFKINYLRLGKNLQDESGKEEYVKSVLKELSLLQDAMQAESYLKSL 417 Query: 416 GNKLGILDDSQLERL----------------MPKAAESGVSRPVPQLKRTTMRILIGLLV 459 + ++ L +L + K ++ ++P R +I ++ Sbjct: 418 SQEFSYSMETLLNQLHQYRKEQKVQQKQIKQVSKPSQIVQTKPKLTGFERAEREIIYHML 477 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 Q+ E+ + P D G+ EL + G L + + Sbjct: 478 QSAEVTVRMEPHIE-DFYTEEHKGILYELYAYYEKGNEPSVGTFLSWLSDEKLKNIITDI 536 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN 565 S + I + E+ L + +L + E+I + + ++ Sbjct: 537 STDEFINPE-YTEEALQGHLEALRRHKEKLEKMEIIFKVKQMEKTD 581 >UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK4_ACIF5 Length = 583 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 214/585 (36%), Positives = 321/585 (54%), Gaps = 21/585 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA FI+ LL D+V LID+RV LKK+G++F ACCPFH EK+PSF+V+ +KQ Y+ Sbjct: 1 MAN-FSPAFIDALLEHCDLVRLIDSRVPLKKKGRDFWACCPFHQEKSPSFSVSADKQIYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAI FLM +D+L F E V+ LA + +P + +G E+ + L ++ Sbjct: 60 CFGCHAHGNAIGFLMAHDRLSFPEAVKTLADEVGVALPEDGPAG----EQESLRPLRAIL 115 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + Y+ +L + A++YL RGLS E+I RF +G+AP + ++ G P RQ Sbjct: 116 EKAIGVYRSALAEH--PPAQEYLRGRGLSEEIIGRFELGYAPSAAGFLSQKLGREPSLRQ 173 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ AG++ + G YDRFR RV+FPIRD RG+ +G GGR L PKYLNSPE+ ++H Sbjct: 174 QLLGAGLVSGREDGSVYDRFRGRVIFPIRDGRGQAVGLGGRSLDGHEPKYLNSPESALYH 233 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGR LYGL++A++ R+L+VEGY+DV+ L Q GI+YAVA+ GT+ +++LFRA Sbjct: 234 KGRVLYGLHQAREGMRRAGRVLLVEGYLDVITLHQAGIDYAVAASGTALGDSQMEMLFRA 293 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + V+ C+DGD AGR+AAWRA++TA ++ GR LR +FLPDG+DPD+LVR++G FE+ Sbjct: 294 AHEVLLCFDGDTAGRNAAWRAVQTAPEHLRAGRLLRLLFLPDGQDPDSLVREQGGAVFES 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + A P F L + +L+ D +A A + +V LR Q + G Sbjct: 354 MLPTARPAIDFFLEELQRRHNLAAEDEKALFLHAARDFLKRVSDPVLREVYEQRVQTLCG 413 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPE---LATLVPPLENLDEN 477 + + R +A R+ + + LL+ PE L L + Sbjct: 414 LAPVA--RRATSRAPRKATF--SAAGGRSLFKTALRLLLNFPEDPAWQALDRDLLPFLFD 469 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD--DIADKNIAEQTF 535 + P + E ++ + L++ +L +A L M D D + + Sbjct: 470 RDPMAEILAEALDILANMTHLSSHELFAKLSVLKHAEACYALVMSDSGDEEGQVLMRLEI 529 Query: 536 TDSLNHMFDSLLELRQEELIARERTHG----LSNEERLELWTLNQ 576 + + + L R I+R G LS +ER E+ L++ Sbjct: 530 SGCVARVNQRLAAAR-SHFISRAADQGGLSALSEQERAEVVRLSR 573 >UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFS4_9CLOT Length = 605 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 177/603 (29%), Positives = 301/603 (49%), Gaps = 35/603 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKN+ CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGVISEYVKLEKKGKNYFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN + F+M+ + L+F E + LA +++P + + ++ L ++ Sbjct: 61 CFGCGKGGNVLHFIMSIENLDFPEALRFLADRAKIQIPDITEGVRNDEKAGLKKELLEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F++ +L YL R + + IA+F IG+A +D + K + Sbjct: 121 LEAARFFRDNLNNEKNNIPNSYLMNRKIQKQTIAKFGIGYAEDRYDILYKHLKAKGFSDS 180 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 S+ +G+++ + G+ YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET+++ Sbjct: 181 SIKQSGLVIYKEESGKIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ LY L A+ ++ +L++ EGYMDV++L Q GI +VA LGT+ T + +LL + Sbjct: 241 QKGKHLYALNFAKSACSK--QLILSEGYMDVISLHQCGIINSVAPLGTALTENQGRLLKK 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +D D AG+ AA+R+L+ G +R + +P G+DPD ++ G F+ Sbjct: 299 YTEEIVLSFDSDSAGQAAAFRSLDLLNEI---GCNVRVLTIPSGKDPDEFIKAHGVTEFK 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L ++L Sbjct: 356 QLVDRSKGLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSDEL 415 Query: 420 GILDDSQLERLMP--KAAESGVSRPVPQ---------------------LKRTTMRILIG 456 G+ S L + K A+S + VP+ L R + +L Sbjct: 416 GVSTQSILSEIAKQQKEADSNFKQQVPRSNNFSRNPIRKSTVVKNQEEWLVRLQLMLLAT 475 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 + + N ++ + F V S+ G+ TG++L A + Sbjct: 476 ICIDNNVYFSIKDVISWDSFESDEVKNAFDFAVERIESKAGILTGEILNKL-SPGMAESF 534 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 + I + N ++ D + + LE R+ ++I +++ L+ + LN+ Sbjct: 535 ANIVQSQSIFEDN--KKAALDIIRKIDLFSLEERKNQIIELKKSSDLTEGDVE---LLNR 589 Query: 577 ELA 579 EL+ Sbjct: 590 ELS 592 >UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_COMTE Length = 688 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 207/449 (46%), Positives = 283/449 (63%), Gaps = 14/449 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI +LL+R D+VD++ V+LKK G NF CPFH+EK+PSFTV+ KQF+HCFGC Sbjct: 30 IPQSFIQELLSRVDVVDIVGRYVQLKKGGANFMGLCPFHSEKSPSFTVSPSKQFFHCFGC 89 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR----QTLYQLM 120 G +GNAI FLM + + FVE V+ELA L+VP + S + + Q+ +TL L+ Sbjct: 90 GKNGNAIGFLMEHAGMGFVEAVQELANQCGLQVPQDDISPAERQRQAQQKQKAETLSDLL 149 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + Y++ L+ A A +YL+KRG+S EV RF +G+AP GW + F + Sbjct: 150 EKAGESYRKQLK--AAPKAIEYLKKRGVSGEVSKRFGLGYAPAGWHGLASVFAE--YDNP 205 Query: 181 SLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L + G+++ + R YDRFR+R+MFPIR+ +G IGFGGRV G++ PKYLNSPET +F Sbjct: 206 QLEECGLVIVGEDDSRRYDRFRDRLMFPIRNVKGEYIGFGGRVFGDEKPKYLNSPETPVF 265 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLYEA+Q + LV EGYMDVVALAQ G A+A+LGT+ T +H+Q LFR Sbjct: 266 HKGRELYGLYEARQALRDMGYALVTEGYMDVVALAQLGFANALATLGTACTPEHVQKLFR 325 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T+ V+ +DGD AGR AA +AL+ ALP TD R ++F+FLP DPD+ +R+ G EAF Sbjct: 326 FTDAVVFSFDGDGAGRRAARKALDAALPLATDTRSIKFLFLPSEHDPDSFIREFGPEAFS 385 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A PLS FL S DL +GRA +++ A PL S +P L+ L E+ L Sbjct: 386 RYVGDATPLSRFLIESASEGCDLGQTEGRAHMASNARPLWSLLPDGALKRQLLSEIA-AL 444 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKR 448 LD L + + A +R P +R Sbjct: 445 AQLDSRDLSDIWAQEA----ARTAPIARR 469 >UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZS4_9PROT Length = 616 Score = 507 bits (1306), Expect = e-142, Method: Composition-based stats. Identities = 195/610 (31%), Positives = 315/610 (51%), Gaps = 35/610 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P+ F+++L R + ++ R L ++G+ F + CPFH++ PS + +K FYH Sbjct: 1 MA--LPQGFLDELRDRVSVSSMVGRRHALIRKGREFVSLCPFHSDSKPSLNIVDDKGFYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CGAHG+ I F+M + L F+E +E+LA + LEVP E + ER + +L +++ Sbjct: 59 CFACGAHGDVIKFVMETEGLGFMEAIEQLAGVAGLEVPKETPEERQRAERTR--SLQEVV 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D +Y++ L+ + + +YL +RGLS E IARF +G+AP + + Sbjct: 117 DLACRWYERQLRTSIGDAGLRYLRERGLSEETIARFRLGWAPEDRKALQRAMKAEGVEVD 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L++AG++ D G + D R RV+FPI D+RG+VI FGGRVLG+ PKYLNSP+T +FH Sbjct: 177 ILVEAGLVKRYDDGETGDYMRGRVLFPITDRRGKVIAFGGRVLGDGQPKYLNSPDTPLFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGR LYGL +A++ + L+V EGYMDV+ALAQ GI +VA LGT+ T D I L++ Sbjct: 237 KGRVLYGLAQAREAAHKSGTLVVTEGYMDVIALAQVGIP-SVAPLGTALTEDQIAELWKV 295 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + C+DGD AG+ AA RA + ALP +T G LRF+ LP+GEDPD+L R++G F Sbjct: 296 VPEPVVCFDGDTAGQRAATRACDRALPMLTPGHSLRFIVLPEGEDPDSLTRRDGPSGFRR 355 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ A P+ L+ + + TP+ RA I + T++ E+ ++ Sbjct: 356 LLDAAEPMVDRLWTAEATSGPVDTPERRADFWRRVRERIRVIADRTVQQSYSDEIETRIE 415 Query: 421 ILDDSQLER---------------------LMPKAAESGVSRPVPQLKRTTMRILIGLLV 459 + S+ R + P + + +R L + +I++ ++ Sbjct: 416 AMRPSRQNRSDGRGSAGRGTFKGGKWTPPPVEPPGSRASRARVDTALGQRQQQIILATVI 475 Query: 460 QNPELATLV-PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 +P L + L +L+ L RE++ + P L L +H + + T+ Sbjct: 476 HHPGLLDELGETLAHLELGDQFLDKLRREILEITEADPDLDAAGLTDHLKALGYSDTVNG 535 Query: 519 LSMWDDIADKNIAEQTFTDS-----LNHMFDSLLELRQEELIARER---THGLSNEERLE 570 L D ++ A + T S L + + R E +A R ++ + Sbjct: 536 LLGADSLSHAAFARPSATHSEARAGLIELVARVGRGRLERQLAEARRIAEESMTEADMDR 595 Query: 571 LWTLNQELAK 580 + L + L + Sbjct: 596 MMGLRKALQQ 605 >UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB91_BREBN Length = 624 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 182/609 (29%), Positives = 299/609 (49%), Gaps = 44/609 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G F+N + A DIVD++ V+L+K G+ F CPFH+EK+PSF VN E+QF+H Sbjct: 1 MTGPTSDEFVNQVRAAVDIVDVVGEYVQLRKSGRAFLGLCPFHSEKSPSFNVNAERQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G+ FLM ++L F E + +LA + VP + E+ + + + Sbjct: 61 CFGCGAGGDIFSFLMKLEQLTFPEALHKLAERAGIAVP-QPQQVEESPEKRMKHVMQEAH 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ Y L + P A +YL KRG+S IA + IGFAP WD V ++ ++ Sbjct: 120 TFVSRLYHYVLTKTPYGAEAMKYLAKRGMSEATIAEYQIGFAPDSWDFVTQQLTKRGFSQ 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--------GNDTPKYL 231 + +++AG+L +D G+ +DRFR R+MFPI+D +G IGFGGR+L PKYL Sbjct: 180 ELMVEAGLLARSDAGKIFDRFRGRIMFPIQDSQGNAIGFGGRLLQGSKHNSNQKSQPKYL 239 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPE+ +F+K L+ L+ A+ + L+ EGY+DV++ Q G +A+LGT+ T Sbjct: 240 NSPESLLFNKSATLFNLHRARPIIRKRKEALLFEGYVDVISAWQAGFTQGIATLGTALTE 299 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 ++L R T +V+ CYDGD AG++A +A+ G +R LP G DPD +R Sbjct: 300 QQARILRRNTESVVLCYDGDAAGQEATSKAIHVL---QQAGLIVRVAPLPQGVDPDDYIR 356 Query: 352 KEGKEAF-EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + G EAF + + QAMP++AF L Q + +ARL A+ +I+++ R Sbjct: 357 QHGAEAFSQQVLLQAMPITAFRLKHLRSQFVIKDETDKARLIAKAVEIINELGSPVERDM 416 Query: 411 LRQELGNKLGIL----------------DDSQLERLMPKAAES------GVSRPVPQLKR 448 +++L + + + Q +++ P S +++ +P Sbjct: 417 YQRQLAEEYSLTLGDLKWESKRAYNQQKSERQRDKVTPAWNNSINNGKVTLAKTLPPAYH 476 Query: 449 TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR 508 T R+L+ +++N E+A V + L L G+ + + + Sbjct: 477 TAERMLLYYMMRNEEIAARVQQECSAHFQVDEHDALAAYLYAYYAEGNPEDPGKFIHYVQ 536 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGL----- 563 L+M + + +++E D + + + E L +R+ L Sbjct: 537 DDLLKQLASGLAMME--CNNDVSELEIGDYIKQVNNYPKRAELERLRDEQRSLHLQAAAA 594 Query: 564 -SNEERLEL 571 S + R +L Sbjct: 595 DSEDARKQL 603 >UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius RepID=B1XVY9_POLNS Length = 652 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 218/653 (33%), Positives = 331/653 (50%), Gaps = 79/653 (12%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP+ FI DLL R DIVD++ VKLKK G NF CPFH+EK+ SF+V+ KQFYH Sbjct: 1 MA-LIPQSFIADLLNRVDIVDVVGQHVKLKKAGANFQGLCPFHSEKSSSFSVSPTKQFYH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI FLM Y L +V+ +E+LA L+VP E + + Q L ++M Sbjct: 60 CFGCGAHGSAISFLMEYSGLGYVDAIEDLARSAGLDVPREERTANDVARQQQAMALSEVM 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG--GNPEN 178 +Y+Q L+ T A +YL+ RGL+ E+ R+A+G+AP GW + FG N E Sbjct: 120 SSAADWYRQQLKGN--TRAVEYLKGRGLTGEIAKRYALGYAPDGWQGLETVFGAYSNDEV 177 Query: 179 RQSLIDAGMLVTNDQG------RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLN 232 ++L+++G+L+ ++Q + YDRFR+R+MFPIR+ +G+ IGFGGR+L PKYLN Sbjct: 178 AKTLLESGLLIQSEQAEGSQSMKRYDRFRDRIMFPIRNPKGQTIGFGGRILDQGEPKYLN 237 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET +F KG LYGL+EA+Q +LV EGYMDVVALAQ G AVA+LGT+ TA+ Sbjct: 238 SPETPLFSKGNTLYGLFEARQAIRAQEYVLVCEGYMDVVALAQLGFPNAVATLGTACTAN 297 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 H+++L R T+ V+ +DGD AG+ AA RALE LP M+D +++ F+FLP DPD+ VR Sbjct: 298 HVRMLLRQTDKVVFSFDGDSAGQRAAQRALEACLPLMSDDKEIHFLFLPTEHDPDSYVRA 357 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G AFE +++A +S+F F + +L+TP+GRA A PL+ +P LR + Sbjct: 358 YGAPAFEKVIKEATSISSFFFKVVSEGHELTTPEGRAHTHHAAKPLLLSMPPIALRTQIL 417 Query: 413 QELGNKLGILDDSQLER-----LMPKAAESGVSRP------------------------- 442 +EL + ++LE + P +P Sbjct: 418 RELAIRTNTTP-AELEAFCGLTVAPAPVRQTTYQPMQARTPGGHNQSAFSGIGNRQGAPW 476 Query: 443 ----------------VPQLKRTTMRILIGLLVQNPELATLVP------PLENLDENKLP 480 P+ ++ +++Q P L + L+ ++ Sbjct: 477 QASKGSAKRVATQNIEPPKAPTDLAEQMLRVIIQFPHLGKALDANKRALALKAAEQRSEK 536 Query: 481 GLGLFRELVNTCL---------SQPGLTTGQLLEHYRGTNNAATLEKLSMW------DDI 525 L ++ + C ++P ++ + + L L Sbjct: 537 AHALMKDFLAQCDLVELIPGEGNKPATVGAGAFAMFQDQLSRSELAPLYEVLRNRVMGSD 596 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + A + + L+ E+ + + +++ L ++L Sbjct: 597 LEIEGAAADLDGAFKKLELIHLKQEMTEIAQKIAGGTATEQDKARYRELGEKL 649 >UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Z2_NATTJ Length = 626 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 186/614 (30%), Positives = 289/614 (47%), Gaps = 40/614 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I + A D+V++ V LKKQGK + CPFH+EKTPSF ++ EKQ Y+ Sbjct: 1 MTIRIPQEIIERIQAEADLVEIASRYVNLKKQGKYYWGLCPFHSEKTPSFHISPEKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE-AGSGPSQIERHQRQTLYQL 119 CFGC A GN FL + ++L FVE ++L +E+P + S E +R+ + + Sbjct: 61 CFGCQAGGNVFKFLESIEQLNFVEVCQKLGEELGIELPADSQDSQELSQEMQEREIIKKA 120 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 F++ L S R+YL R + + +A F IG+AP W + Sbjct: 121 NKYAANFFRYVLMNTETGKSGRKYLADRKIDKQTMADFFIGYAPDNWTGLSDFLKKKGFT 180 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPE 235 + L+ AG+ + YDRFR RV+FPI ++RG VIGFGGR+L PKYLNSPE Sbjct: 181 EELLVKAGLSNRRKYREGVYDRFRGRVIFPIYNQRGEVIGFGGRLLEESEKQPKYLNSPE 240 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F+K LYGL A + + N LV+EGY DV+ Q+G+N AVASLGTS T + + Sbjct: 241 TPVFNKRLSLYGLNLAFKTIRKENHALVMEGYTDVITAHQFGVNTAVASLGTSLTEEQAK 300 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L+ + +D D AG A R LE + G + LP+ DPD ++ G Sbjct: 301 LIRNNASKAYIAFDADAAGETATLRGLEIL---QSKGLDVLICQLPESYDPDEYLKNYGL 357 Query: 356 EAFE-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F+ ++ A+PL+ + +LST +G+ + T +P+IS++ R + Sbjct: 358 ENFQKKILDTALPLTEYQIRQAAKNKNLSTIEGKKQYVTEIIPIISKIDNAVEREEYLNQ 417 Query: 415 LGNKLGILDDSQLERLM------------PKAAESGVSRP---------------VPQLK 447 + +LGI ++ LM K ++GV+R + Sbjct: 418 VSEQLGISQEALNSELMKYFRKNYRNKNYRKMDKTGVNRKNKRKNNGSETVKFADKRTPR 477 Query: 448 RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLF-RELVNTCLSQPGLTTGQLLEH 506 L+ L++ PE V ++ L L +L L L + Sbjct: 478 EKAEEGLVALMLHFPEYTEEVNKFLYPEDFSSDTLALIVHKLYQLKNHDIELDLSNLTQE 537 Query: 507 YRGTNNAA-TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN 565 R +A + KL M D K+ E+ D + + +S ++ ++EEL +E + + Sbjct: 538 LRDHPDAENIITKLGMKDFPQPKD-IEKFVKDCVFRIKESRIKSQREEL-QKELSQINPD 595 Query: 566 EERLELWTLNQELA 579 E + ++L Sbjct: 596 HEPDRYREILRKLQ 609 >UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_BACSK Length = 603 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 181/607 (29%), Positives = 297/607 (48%), Gaps = 34/607 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +IP + ++ +DIV++I V+LKKQG+ + CPFH+EKTPSF+V+ +KQ YH Sbjct: 1 MAVKIPDEKLTEVREASDIVEVIGEYVQLKKQGRQYGGLCPFHDEKTPSFSVSEDKQVYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GN FL F ETV LA + +P + + E + + + + Sbjct: 61 CFGCGAGGNVFTFLQELKGWSFSETVSHLAERAKIALPQMQKTETDKPEDARIRQMKKGH 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + Y L R Y ++R + + I F IG+A W+ + F N + Sbjct: 121 ELAASTYHSILTLTEEGAPGRVYAQERLFTQDQIEHFRIGYALNDWETLAVIFETNGLDL 180 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + ++G+L QG YD FRER+MFPI D +G V+ FGGR +G PKYLNSPET I Sbjct: 181 AVMAESGLLAKRKQGTGYYDLFRERLMFPITDSQGSVVAFGGRAIGEGQPKYLNSPETPI 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK + L+ ++EA+ + N+ L+VEG DV+A + G+ VA+LGT+ ++DH +LL Sbjct: 241 FHKAKTLFHMHEARPSIRKQNKALLVEGAFDVMAAWKAGVTNVVATLGTALSSDHAKLLR 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI CYDGDRAGR+A +A+ G ++ LP+G DPD V++ G+EAF Sbjct: 301 RNAEEVILCYDGDRAGREAIRKAIPVL---EEAGCKVSICLLPEGLDPDDYVKQHGEEAF 357 Query: 359 EARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 ++ + + AF L ++ R + + +++++ + Y Q+L Sbjct: 358 VRILDNECLSVMAFRMLDLKQGKNMQNEGDRLQYIEEIVQMLAKLEHSVEQEYYLQQLAE 417 Query: 418 KLGILDDSQLERL----------------MPKA------AESGVSRPVPQLKRTTMRILI 455 + D + L +P+A + G +RPVP + RIL+ Sbjct: 418 SFTLPMDVLRQELSRAERLLKQTKETPKALPRAEKPTSGRKQGSARPVPAHVK-AERILL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 ++Q+ E+ V N L+ L++ +P + + +E A Sbjct: 477 AYMLQDTEMVWRVSEKLGTGFNLEEHQALYAYLLSFVTREPDASMKRFVESLEDRRLAKL 536 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHM--FDSLLELRQEELIARERTHGLSNEE-RLELW 572 L M +++ D + + + ++L++++ AR + + ++EL Sbjct: 537 AAYLLMQP--LKNECSDEELADYIKRIEQYPKWVKLKEQQQAARFEQDPIRAAKLQMELI 594 Query: 573 TLNQELA 579 L +EL Sbjct: 595 RLKKELQ 601 >UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXZ5_HALNC Length = 559 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 212/565 (37%), Positives = 322/565 (56%), Gaps = 17/565 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI+D+LARTD+V+LI A+V LKK+GK + ACCPFH EKTPSF VN +KQFYHCFGC Sbjct: 7 IPESFIDDVLARTDLVELIHAQVPLKKKGKEYAACCPFHQEKTPSFYVNPDKQFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHGNA+ FLM+Y+ +F +EELA + +P + E+ + M N Sbjct: 67 GAHGNAVSFLMDYEHRDFRGAIEELATRAGMTLPVSEVDHKALEEQA---AMLDSMSFAN 123 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +++ L+ A YL++RG++ A F +GFAP G + +L P+ R L++ Sbjct: 124 AHFKRQLR--AHQEAIDYLKQRGVNGTTAALFDLGFAPNG-NLLLGHCESPPKMRDELLE 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++V D G YDRFR R+MFPIRDKRG++IGFGGR+LG PKYLNSPE+ +FHKG+ Sbjct: 181 LGLIVQKDDGEQYDRFRRRIMFPIRDKRGQIIGFGGRILGPGEPKYLNSPESRLFHKGQN 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLYEA+ D+A P R+++VEGYMDVV LAQ+G+ VA++GT+TT + Q L+R + ++ Sbjct: 241 LYGLYEARLDDARPARVIIVEGYMDVVMLAQHGVRNVVATMGTATTDEQTQSLYRFSPSL 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME- 363 + C+DGD AGR AA +AL ALP++TDGR LRF+FLPDGEDPD+ ++ +GK AF ++E Sbjct: 301 VFCFDGDAAGRRAATKALHAALPHLTDGRDLRFLFLPDGEDPDSFIQAKGKSAFIEQIEH 360 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 ++ F+ L A+ S L I +P L+ ++ + G+ Sbjct: 361 HSLSFDNFILQLLDQMEPGQDTAAMAKKSKLGNDWIRTLPDGALKRITQRRINEHTGVWR 420 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLG 483 + + P ++P K+T +++ +++++P+L V + +++P Sbjct: 421 AAYKKNTGPTEPTLPRNKPQSYAKQT---LILSIVLKHPDLLQRVLEPQAWFNSRVPEGF 477 Query: 484 LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMF 543 +QP Q G T + + A+ D+L + Sbjct: 478 ------QLLATQPRARWAQSASELWGAEETKTALAIEFQGIERAET-AQNILEDTLIQLH 530 Query: 544 DSLLELRQEELIARERTHGLSNEER 568 S + ++ + ++ +E+ Sbjct: 531 RSESDSASKQASRQALARFMAEQEK 555 >UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNW9_9FIRM Length = 592 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 168/588 (28%), Positives = 279/588 (47%), Gaps = 19/588 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M F+ + +TDI+ ++ V LK++G + CCPFH EKT SF+V +K F++ Sbjct: 1 MRNEAMEAFVERVSEQTDILRIVQGYVPLKRRGNRYWGCCPFHQEKTASFSVLPDKGFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GNA FL + + + + ++ A + +P S + Q L ++ Sbjct: 61 CFGCHAGGNAFKFLSLIENISYFDAIKLQAEKLGIPLPERKRSPQEVARDREIQDLRKVN 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ L + + Y RG+ E I F +G+APP WD + F + Sbjct: 121 ELARDFFHNCLTMTRMGERGKAYFAARGIRQETIEEFQLGYAPPAWDKLSTAFLKRGIKQ 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + L+ +G+ QG YDRFR RV+ PI D+RGRV+GFGGRVL + TPKYLN+PET + Sbjct: 181 EFLLASGLCAERKQGGGLYDRFRGRVIIPIADERGRVVGFGGRVLDDSTPKYLNTPETVL 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K + L+GL + + + R +VVEGYMD +++ G++ VASLGT+ T +H + L Sbjct: 241 FNKRKLLFGLDRSHRAIQQEGRAIVVEGYMDAISVFDAGVHNVVASLGTAFTPEHAKKLL 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + CYD D AG+ A RAL G ++R + +PDG+DPD +RK G +AF Sbjct: 301 HYAPEICFCYDSDEAGQKATIRALSI---VRDTGARVRVIVVPDGKDPDEFIRKHGADAF 357 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A +E+A+PL + ++ + T DG+ + +P+++ + +R + L Sbjct: 358 RALVEKALPLVEYRLRYVLSHTNYDTLDGKVKALHEMMPVLAGIREAAVRSEYERRLAQT 417 Query: 419 LGILD---DSQLERLMPKAAESGVSRPVPQLK-------RTTMRILIGLLVQNPELATLV 468 L + + S+L P+ AE V +P+ + R R++I + Q+ + + Sbjct: 418 LMLDEGIVRSELRHYRPE-AEEAVRQPIRKAVAKADTALRKAGRLVIRMAWQDAAVIAHL 476 Query: 469 PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + L+ + P + + A L D+ Sbjct: 477 ETIVPLEGIRDPAQREILTFLKAAAEEGRPVDDMSAATLSDEAAAELSRSLVEDLGGRDE 536 Query: 529 NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 + + DSL + + L E + + + + L LN+ Sbjct: 537 T---EAYDDSLRVLRKAYLNALYTEHSRKANEYAQNGQHEACLQELNE 581 >UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6TSH0_ALKMQ Length = 611 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 178/585 (30%), Positives = 277/585 (47%), Gaps = 36/585 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I+++ A+ +I D+I + LK+ G + A CPFHNEKTPSF V+ EKQFY Sbjct: 1 MEKGFPEELIDEIKAQNEITDVISQYISLKRIGSSNKALCPFHNEKTPSFNVSTEKQFYK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+F+E ++ LA N+E+P + S E R +++ Sbjct: 61 CFGCGEGGDVIQFIMKMENLDFMEAIKMLAQRANIEIPEKDQSLEVAEEMKLRNLFWEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y L + + A YL +RGL + I F +GFAP W +++ + + Sbjct: 121 KKAAKYYYHCLTKEKSI-ALGYLSERGLISKTINTFGLGFAPNEWQGLIQHLTQEGYDLK 179 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+++ +Q YDRFR R++FPI D RG V+GFGGRVL + PKYLNSPET +F Sbjct: 180 DIEKCGLIIPKKEQSGYYDRFRNRIIFPIFDIRGNVVGFGGRVLDDSLPKYLNSPETKLF 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K R LYGL A++ +L++VEGYMDV+ L Q G VA+LGTS T +H Q+L R Sbjct: 240 NKSRILYGLNIARKYMT-TRQLILVEGYMDVIPLYQQGFKNVVAALGTSLTKEHAQVLKR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++VI C+DGD AG A R++E ++ M +P G DPDT ++ +GKE F+ Sbjct: 299 YCDDVILCFDGDEAGIKATLRSIEIL---KNGDFNIKVMMMPKGVDPDTYIQSKGKEGFQ 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A+ + + + +GR L+ +I Q+ + Q++ + Sbjct: 356 RAINAALNVVDYQIMLAKEKYPQDKVEGRVNLARDIAKIIKQIKSPIEKEAYIQKVSQET 415 Query: 420 GILDDSQLERLMPKAAESGVS------------------------RPVPQLKRT-TMRIL 454 GI D+ + + + PV Q T + L Sbjct: 416 GINQDAIALEVYGHQKKQKPNSETKKYSSNYNRNNNSKYKYIEALPPVEQKGHTIIEKQL 475 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 I ++ N + ++ + L E + T QL+EHY Sbjct: 476 IKFMLLNINAIPHLMEKVEAEDFTIGKHQLIVEYIYENHQNLQ-GTQQLVEHYPDLK--E 532 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 T+ L + + L ++ L +L RE+ Sbjct: 533 TMTDLLHIEIQHID--MNKAIDQYLRNLKRYKLLYEIRQLQQREK 575 >UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7C0_DESRM Length = 604 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 174/600 (29%), Positives = 291/600 (48%), Gaps = 33/600 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP I ++ RTDIV++I + ++K+GKN+ A CPFH EKTPSF +N E+Q +H Sbjct: 1 MAGRIPDSVIEEIRQRTDIVEVISRFIHVEKRGKNYLALCPFHQEKTPSFNINPERQMFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + L F E+V L +EVP E S ++++ ++ +++ Sbjct: 61 CFGCGVGGNVFKFLMMVEGLSFPESVRSLGTKLGIEVPEEI-SPKERVKQGKKDRAFKIY 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY L + + A +YLE R L+ + F +GFAP GWD++ + + Sbjct: 120 GLARDFYHFLLTKEIGIGAIRYLESRNLTDKTRETFELGFAPLGWDSLTGFLTAKGISGE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L G++ + G YDRFR R+MFPI D +GRV+GFGGR +G D PKYLNSPE + F+ Sbjct: 180 ELTKLGLVQKKESGGYYDRFRNRIMFPIWDNQGRVVGFGGRTMGEDNPKYLNSPEGEYFN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGL+ A++ E +++EGYMDVV+ Q+G+ AVASLGT+ T D ++L Sbjct: 240 KGQLLYGLHIARKGIREQGYAVLMEGYMDVVSTYQHGVTNAVASLGTAFTRDQGKILMMY 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+ YD D AG AA RA + G Q+R + +DPD ++ G E +++ Sbjct: 300 THDVVIAYDADTAGIKAATRAADILQEL---GCQVRIATIVGAKDPDEYIQSHGLEGWQS 356 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ AMPL + + L + R+ LP ++ V ++ L Sbjct: 357 IIDHAMPLVQYKLLQAAQKHGLQNAGAKQRILREVLPNLASVASAIELEETVKQAATVLQ 416 Query: 421 ILDDSQLERLMPKAAESGVSRPVP----------------------QLKRTTMRILIGLL 458 + ++ LE + S + + ++ Sbjct: 417 VNWETVLEEIKKYKRNSRKKSQIEDNFAKESHNISSARYFAPVRPKDARSNAEAGVLRFA 476 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 ++N E + D + +++ + + L + +LL+ ++ Sbjct: 477 LENKEYLERILQELGNDFFQ---NNVYQRIFDVHLGNKEQNSARLLDELDESSQRIVSSL 533 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 L +Q +D +N + + + + ++L+ + S + + L++++ Sbjct: 534 LVQ---EIPGENMDQILSDFINTIKRTREKAKLDDLLMQLAAAEKSGD-TERVIELSRKI 589 >UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H3_MAGSA Length = 623 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 202/552 (36%), Positives = 280/552 (50%), Gaps = 32/552 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P F+++L AR + ++ RVKL ++G+ CPFHNEKTPSFTVN +K F+H Sbjct: 1 MA--FPPQFLDELRARIPVTSVVARRVKLVRKGREHQGLCPFHNEKTPSFTVNEDKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F M L F E VE+LAA +EVP S ++ +R +L+ + Sbjct: 59 CFGCGAHGDAIGFEMRAGHLSFTEAVEKLAAEAGIEVP--KASPEERVREQRRASLHDAL 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + + F+++ L+ P YL+ RGLS + IARF +GFAP + + Sbjct: 117 EAASAFFEKHLRGPAGRDGFAYLKNRGLSDDTIARFRLGFAPDSREALKSALMSKECPES 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 LI+AG+L + G S+D FR RVMFPI D+RGRVIGFG R LG+ PKYLNSP+T +FH Sbjct: 177 LLIEAGLLKKPESGASFDYFRGRVMFPITDRRGRVIGFGARTLGDGQPKYLNSPDTPLFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGL A++ E NR++VVEGYMDV+AL Q G YAVA LGT+ T I+ L+R Sbjct: 237 KGQTLYGLAHAREMARELNRVVVVEGYMDVIALHQAGFAYAVAPLGTAVTEQQIEELWRL 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 I C DGD+AG+ A RALE A P + G+ LRF LP EDPD+L++ G A A Sbjct: 297 APEPILCLDGDKAGQRAMERALERAFPILKPGQSLRFATLPAPEDPDSLIKARGPAAMAA 356 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ A PL + L TP+ RA L + ET+R K+ Sbjct: 357 VLDAAQPLVEVAWRVATQDRPLDTPERRALLEKELSDKAFSIADETVRYQYLATFRQKIK 416 Query: 421 IL-------------------------DDSQLERLMPKAAESGVSRPVPQLKRTTMR--I 453 D Q P GV RP P + + Sbjct: 417 ESFRPPPRPWTNAGGGKMGGKGFGRFRPDPQAPLKGPDGMLPGVGRPRPPRPNAGAQEWM 476 Query: 454 LIGLLVQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNN 512 ++ L++ +P L + L R ++ + L L + R Sbjct: 477 MLTLVLDHPRLMDSIGERLGETTFADKTLDNLRRGILKHLGAARDLDADGLATYLRTDGY 536 Query: 513 AATLEKLSMWDD 524 + L+ L ++ Sbjct: 537 SEILDSLLDANE 548 >UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3PKA2_CELJU Length = 694 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 231/440 (52%), Positives = 310/440 (70%), Gaps = 3/440 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIVD++D+RVKLK+ GKN+ ACCPFH+EKTPSFTV+ EKQFY+ Sbjct: 1 MAGLIPQSFIDDLLDRVDIVDVVDSRVKLKRSGKNYSACCPFHDEKTPSFTVSPEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M+Y++L F E VE+LA + LEVP E S +++++Y L+ Sbjct: 61 CFGCGASGNALGFVMDYERLSFPEAVEQLARITGLEVPREVQSEAEAKREQEKKSIYSLL 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + FYQ L Q P A YL+ RGL + + +GFAPPGWDN+LK G + +++ Sbjct: 121 EKADDFYQHQLRQHPSKHLAVNYLKGRGLDGKTAKTYGVGFAPPGWDNLLKTLGQDDDDK 180 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 LI GML+ +Q + YDRFR R+MFPIRD RGRVIGFGGRVLG+D PKYLNSPET + Sbjct: 181 HLLIQGGMLIHQEQEKKLYDRFRHRIMFPIRDTRGRVIGFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA+ E RLLVVEGYMDVV+LAQ+GI Y VA+LGT+ DH+ F Sbjct: 241 FHKGQELYGLYEARLAYRELPRLLVVEGYMDVVSLAQFGIGYGVATLGTACGPDHLDRAF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ V+ C+DGD+AGR AA RAL+ AL M DGR ++F+FLP+GEDPDTLVR+ G + F Sbjct: 301 KYTSEVVFCFDGDKAGRSAALRALDAALETMADGRAVKFLFLPEGEDPDTLVRQIGPDKF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E +E A+PL +LF+++ +++ T +GRA S A PL+ ++P R + + L + Sbjct: 361 EHMIELAVPLEDYLFDAVAEGLNIRTMEGRATFSKRAAPLLDRLPKGVFRELMFENLATR 420 Query: 419 LGILDDSQLERLMPKAAESG 438 G L+ L+ L+ G Sbjct: 421 TG-LNRRLLDELIADQKAKG 439 >UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AB5_SOLUE Length = 580 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 166/582 (28%), Positives = 286/582 (49%), Gaps = 24/582 (4%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+ L + DIV +I V+L++ G + + CPFH+EK+PSFTV+ QFY CF CGA Sbjct: 2 DFVEQLKSSVDIVSVIGEYVRLRRSGTQRYMGLCPFHDEKSPSFTVHVVHQFYKCFSCGA 61 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ + F+M + + F E ++ L+ + + +P S + + R +L + + Sbjct: 62 GGDVVKFVMEKEGISFYEALKSLSERYGIPMP--KRSQYADEDSKLRGSLLVMHELAAEN 119 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 ++ +L+ +AR Y+ +RGL+ E + F +G+A +++ F + + +G Sbjct: 120 FRDNLKSQAGDNARAYIAQRGLAPETVEHFGLGYADRSGRALVRLFEQREFSVAQMEQSG 179 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKGRQL 245 ++ G YDRFR R+MFPI +++G++I FGGR L +D PKYLNSPETDI+ K L Sbjct: 180 LVGKRQDGSLYDRFRNRLMFPIHNEQGKIIAFGGRALSPDDEPKYLNSPETDIYKKSHVL 239 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 Y L+ A+Q + +R ++VEGYMDV+ + G + VA GT+ A +Q + R T+ + Sbjct: 240 YNLHRAKQGIRKEDRAILVEGYMDVIGVTAAGFHNVVACCGTAFGAQQVQAIKRHTHRIA 299 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +D D AG A+ R+L+ L +G Q+R + L G DPD ++ G EA++AR++ A Sbjct: 300 VNFDPDAAGAGASERSLDLLL---AEGMQVRIVELDGGLDPDEYCKERGTEAYQARIDGA 356 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 +L + + D+ T +G+ + LP + + R+ + ++ +G+ Sbjct: 357 KGYFYWLADRARAKHDMRTSEGKVAVLNFLLPKVQNIADSLERMTVANDVAGYIGVDQGM 416 Query: 426 QLERLMPKAA---ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE-NKLPG 481 L+ A+ E + RP L+ +LI LL + A L+ ++ L+ LP Sbjct: 417 VLDHFKKAASDRNERAIPRPANPLRHDERMLLIALLTHSEGRAELIEQMKVLETIETLPS 476 Query: 482 LGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNH 541 +F+ + + + +L + L+ D I+ + S+ Sbjct: 477 RRIFQAVFALDEAGGRIGFEELNSRLEEADQ----NLLAQAVLNEDGEISPEEVAASVES 532 Query: 542 MFDSLLELRQEELIARERTHGLSNEERL----ELWTLNQELA 579 + S E + L + R S ER E L EL Sbjct: 533 LRRS--EQQYLRLQLKARI---SESERAGKFDEAVRLTMELQ 569 >UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT Length = 590 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 191/594 (32%), Positives = 291/594 (48%), Gaps = 18/594 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ I + DIV ++ V LKK+GKN+ CCPFHNEKTPSF+V EK FY+ Sbjct: 1 MSRYFENELIEQIKDANDIVSVVSEHVALKKRGKNYWGCCPFHNEKTPSFSVAPEKGFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GNAI FLM + L FVE +E LA N+ +P S + +R+ LY+ Sbjct: 61 CFGCHASGNAIKFLMELEHLTFVEALERLANRANIPLPEAKLSPEQRARDERRKKLYEAS 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D TF+ L Q + YL+KRGL+ I F +GFAP GWD + + F + Sbjct: 121 DLAATFFHNCLTQTSIGKVGLDYLKKRGLTQATIETFKLGFAPDGWDKLYRAFHDRGIDD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L++ ++ N +G+ YD FR R+MFPI D +GRV+ FGGRV+ + TPKYLNSPE+ IF Sbjct: 181 SILLELNLVRKNQKGQFYDFFRNRIMFPIMDGKGRVVAFGGRVMDDSTPKYLNSPESSIF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ L+ +A + E + ++VEGYMDV++ +G+ VASLGT+ T DH +L R Sbjct: 241 EKGKLLFAFDKAYKSIREEKQAILVEGYMDVISAHNHGVTNVVASLGTAYTRDHGHILMR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ YD D AGR AA RA+E ++R + +PDG+DPD VR G +AF+ Sbjct: 301 QAEEIVLAYDMDGAGRQAAARAIELL---QNTDFKVRVLAMPDGKDPDDYVRNHGGQAFK 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A+ +L + + + D + +G+ + P I+ + +T R + L L Sbjct: 358 ELVAKAVKPLDYLLSESLIKHDTNDTEGKQAVMADVFPYIANIDSQTQRDDALKTLALPL 417 Query: 420 GILDDSQLERLMPKAAESGV---------SRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 LD+S + R + G P L + L+ L + E+ + Sbjct: 418 -WLDNSTIFRYFRDYVKKGQIELVDTASTPLPTQDLPKGDAEKLLSLAFTDGEVLQHMMS 476 Query: 471 LENL-DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 L D K+ G+ +L S+ L + + M DD Sbjct: 477 YLPLEDFEKIEYRGIIEKLFTLYKSEGRLDETAIQSVLSSQEYDIYSRLVVMSDDEYKVQ 536 Query: 530 IAEQTFTDSLNHMFDSLLELRQ--EELIARERTHGLSNEER-LELWTLNQELAK 580 + L+ + + ++L + +S + E+ L +E +K Sbjct: 537 VPALIRKIRLHSLREQYKAHSIMADQLKRAGDSTFISELHKCQEIQNLIREWSK 590 >UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K284_DESAC Length = 603 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 184/607 (30%), Positives = 291/607 (47%), Gaps = 31/607 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP I+ + R DIVD++ VKLK G N CPFH+EKTPSF VN +Q +H Sbjct: 1 MA-RIPEDLISQVRERVDIVDVVSGYVKLKHSGDNHLGLCPFHSEKTPSFNVNSSRQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + L F + V+ LA + +P + S R +R+ L ++ Sbjct: 60 CFGCGVGGNVFSFLMRMEGLAFPQAVKRLADQVGVVIPDDEPSPEEVRRRLEREELAEVY 119 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L P AR Y+ +RG E + RF +GF+P WD + + + Sbjct: 120 EQATRFYHDILLADPRGAQARGYIRRRGFDSEAVRRFRLGFSPDSWDALCEHLTSEGTDL 179 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 G++ +D+ G +D FR+R++FPI D G+V+ FGGRVL + PKY+NSPE+ + Sbjct: 180 DKARQLGLIRRSDKTGNDFDMFRQRLLFPIEDLSGKVVAFGGRVLDDSLPKYINSPESAL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK R LYGLY+A+Q ++VVEGY D +AL Q GI + VA+ GT+ T DH ++L Sbjct: 240 YHKSRLLYGLYQAKQAMRRERAVIVVEGYFDHLALVQAGIEHVVATCGTALTDDHAKILK 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ +D D AG+ A +RA+ + L G ++ + LP G+DPD+ VR+EG EAF Sbjct: 300 RYVERVVLLFDEDAAGQKACFRAMPSLLQ---QGLEVMTLSLPAGDDPDSCVRREGAEAF 356 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R+ +A + Q + +AR L ++ +VP + R +L + Sbjct: 357 LQRLNEARSAIEVHMEVTLEQAG-DRAEAQARAIDTVLQMMQRVPDDIQRNLHLGQLAQR 415 Query: 419 LGILDDSQLERLMPKAAE--------------SGVSRPVPQLKRT----TMRILIGLLVQ 460 G+ + +L E + RPV + + L+ L++ Sbjct: 416 SGVTVELLQRQLERTQVEDQPPAPRPQPAPRPAVAPRPVEPEEIQGDFKAQKWLLTLMLA 475 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 + ++ V + + ++ +L+ L +L Sbjct: 476 DGGVSGTVEEQGIDALFDNAVCQKVAQQIQRAHAEQREPGEWMLDQCEDPRAQDLLTQLL 535 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS-NEER-----LELWTL 574 + + + E+ F D + S L+ R+ EL + R + E+ EL + Sbjct: 536 VREQELVSDDIEKIFGDCRQAVVRSQLKQRRAELHTQMRAAEQHGDSEKQTACLQELTRI 595 Query: 575 NQELAKK 581 N+EL ++ Sbjct: 596 NRELKRR 602 >UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUC5_DESOH Length = 613 Score = 501 bits (1290), Expect = e-140, Method: Composition-based stats. Identities = 185/611 (30%), Positives = 289/611 (47%), Gaps = 48/611 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++ DIVD++ V+LKK GKN+ CPFH+EKTPSFTV+ +KQ +HCFGC Sbjct: 3 IPDDIIANIKNSADIVDIVSEVVRLKKTGKNYLGLCPFHSEKTPSFTVSPDKQMFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G+ FLM + L F E V LA + +P + +RQ L +M Sbjct: 63 GEGGSVFTFLMKHQGLGFPEAVALLAKRCGIALPRPEKGSREAKDVSERQRLLSVMQRAA 122 Query: 125 TFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY L++ P A +Y+ +RGLS +++ F +G+AP GWD + + + Sbjct: 123 AFYHSCLREGPGGERATRYMAERGLSDDMVRDFQLGYAPGGWDALTRFLSKHKIPMPLAE 182 Query: 184 DAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 AG++V N +G YDRFR R++FPI D GRVI GGRV+ + PKYLNSPET ++ K Sbjct: 183 QAGLVVLNREGSGYYDRFRNRIIFPITDLTGRVIALGGRVMDDTLPKYLNSPETPLYSKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 LYGL +Q + + + EGYMD ++L ++GI VA+LGT+ TA+H+++L Sbjct: 243 NSLYGLSHTKQMCRQAGTVYITEGYMDFLSLYRHGIKNVVATLGTALTAEHLRMLKGFVT 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + +D D AG AA R++E G Q + LP G DPDT VR+ G + FEA Sbjct: 303 KAVLVFDSDAAGIKAAQRSIEIF--NGEKGIQPFILVLPTGHDPDTYVRENGAQDFEALA 360 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 +A +FL S + + LS +G+ R+ + ++ V R +E+ +LGI Sbjct: 361 RKAGGAMSFLLESAVNRHGLS-LEGKIRVMSDLEESLAAVEDGVARSLYVKEVSERLGIE 419 Query: 423 DDSQLERLMPKAAESGVSRPVPQL------------------------KRTTMRILIGLL 458 + + LE++ AA P L R L+ ++ Sbjct: 420 ESAVLEKVRQAAARRRSRSARPSLFTVDTSASGGDQRKEETTASVFGRSLRMERQLLSMM 479 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE- 517 + PE+ + + L L L+ T + +++ + + Sbjct: 480 LHVPEMISEIESRNVLSLFADERLKTIGTLLVTHRRALENRSVDIVDVVPDESLQRIVSA 539 Query: 518 -----KLSMWDDIADKNIAEQTFT------DSLNHMFDSLLELRQEELIARERTH----- 561 +L MW++ + + Q D+L+H + E R +L+ Sbjct: 540 LCVGDELCMWNETGCRKLIGQFVDSRLRHVDTLSHRIKAAEENRDGDLLDHLLKAKQEQV 599 Query: 562 --GLSNEERLE 570 L+ E++ E Sbjct: 600 RNKLTIEQKGE 610 >UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 RepID=C7I405_THIIN Length = 624 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 240/626 (38%), Positives = 327/626 (52%), Gaps = 57/626 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP FI DLLAR DIV+++ V+LKK G N+ CPFH EKTPSFTV+ KQFYH Sbjct: 1 MQQRIPPGFIQDLLARADIVEVVGQYVELKKTGTNYKGLCPFHGEKTPSFTVSASKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ----TL 116 CFGCGAHG AI FLM + + FV+ V+ELA + + VP + Q++ TL Sbjct: 61 CFGCGAHGTAIGFLMEHAGMGFVDAVKELAGRYGMTVPEPDLDPQQLRQLQQQRSLQATL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 + + FYQ L+ + A+ YL RGL +V +F +G+AP W + F Sbjct: 121 VDALQTADGFYQHRLRH--SERAKNYLIARGLQGQVAKKFGLGYAPDDWQPLAGAFAN-- 176 Query: 177 ENRQSLIDAGMLVTNDQ---------------GRSYDRFRERVMFPIRDKRGRVIGFGGR 221 N +L+ +G++V D R YDR R+R+ FPIR+ RG VIGFGGR Sbjct: 177 YNADALVQSGLVVARDAAGDTLDPQAESFASAQRRYDRLRDRITFPIRNLRGEVIGFGGR 236 Query: 222 VLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYA 281 ++ PKYLNSPET +FHKG +LYGL+EA+ + LVVEGYMDVVALAQ+G+ A Sbjct: 237 IIDQGEPKYLNSPETAVFHKGEELYGLFEARSAISRAGYALVVEGYMDVVALAQFGVEQA 296 Query: 282 VASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLP 341 VA+LGT+ TA +Q LFR T V+ +DGD AGR AA RA+E ALP ++D R ++F+FLP Sbjct: 297 VATLGTACTAQQLQKLFRHTGQVVFSFDGDTAGRRAARRAMEQALPLLSDTRVVKFLFLP 356 Query: 342 DGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 DPD+ VR++G EAFE + +A PLS FLF+SL V ++T +GRA+ A PL+SQ Sbjct: 357 AEHDPDSYVREKGAEAFEREIGRAQPLSEFLFSSLFDGVAMTTAEGRAQAIHEAGPLLSQ 416 Query: 402 VPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQN 461 + L L +L +L + E L + S P M+ + Sbjct: 417 ITAPALLGQLVADLARRLEMPATELREVLRLSSPSRKPSAPAESFGTRGMKTAPRVRGGR 476 Query: 462 PELATLV--------------------------PPLENLDENKLPGLGLFRELVNTCLSQ 495 L L P GL L + Q Sbjct: 477 EALRAFAAVPKDPLRQLLPLLLSQPELWWSINPAQHALLSLEPGPLQGLVLTLESILEDQ 536 Query: 496 PGLTTGQLLEHYRGTNNAATLEKLSMWDD--IADKNIAEQTFTDSLNHMFDSLLELRQEE 553 P L+ L E R +A E L+ D D+ A+Q L+ + + L+ RQ+E Sbjct: 537 PELSAAALWEALRAAGHAPE-EMLAESPDPLELDEAAAKQDLLAILSRLERAALKRRQDE 595 Query: 554 LIARERTHGL-SNEERLELWTLNQEL 578 L+A GL ++ +R E +L L Sbjct: 596 LVA----GGLVADADRTEYRSLALRL 617 >UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 Length = 587 Score = 500 bits (1288), Expect = e-140, Method: Composition-based stats. Identities = 177/593 (29%), Positives = 291/593 (49%), Gaps = 28/593 (4%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 R I+++++R DIVD+I VKLKK G ++ CPFHNEK+PSF+V+G++Q YHCFGCG Sbjct: 3 SREVIDEVISRNDIVDVISGYVKLKKNGSSYTGLCPFHNEKSPSFSVSGQRQLYHCFGCG 62 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN I F+M Y+ + F+E V+ L + +P + S + ER R L ++ T Sbjct: 63 AGGNVITFVMEYENMTFLEAVKMLGERAGVALPQTSMSEEDRKERGIRDRLLEINKIAAT 122 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 +Y + L+ + YL+KR LS I F +G+A N+ K + L ++ Sbjct: 123 YYYRQLRSENGKAGLDYLKKRELSDSTINSFGLGYATQSTGNLYKLLKDKGYDDDILKES 182 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+ T ++G +++F RV+FPI D +VIGFGGRV+G+ PKYLNSPET +F K R L Sbjct: 183 GLF-TYERG-IHEKFWNRVIFPIMDINNKVIGFGGRVMGDAKPKYLNSPETRLFDKSRNL 240 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL A+ + +PN +++ EGYMDV+++ Q G N AVASLGT+ T H +LL R T+NV+ Sbjct: 241 YGLNIAR-TSRKPN-MIICEGYMDVISMHQAGFNQAVASLGTALTPGHARLLKRYTDNVL 298 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA RA+ G + + + +DPD ++ G EAF+ R++ A Sbjct: 299 ITYDSDEAGVKAALRAIPIL---KEAGLSTKVINMRPYKDPDEFIKAMGAEAFQERIDNA 355 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 + +++ D P+ + + R + + + I +D Sbjct: 356 ENSFMYEIGTMLRNYDRGDPESETAFEREVAAKLVTFKEKLERDNYLKAVCRQFMIPEDG 415 Query: 426 QL---------ERLMPKAAESGVSRPVPQLK---------RTTMRILIGLLVQNPELATL 467 E ++ + A +G +P + K R ++L+ L+ + ++ Sbjct: 416 MRQMVSRLGNQEGIISRNAGAGTPQPTVERKPKKKREDGLRQAEKMLLTWLISDRDIFDK 475 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 V ++ P E V ++ ++ Y T + + D Sbjct: 476 VAGYIKPEDFIDPLFSGVAEKVYEQYGTGNISPAAIIADYATTEEHTEVAAMFSADLDES 535 Query: 528 KNIA--EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 N E+T D + + + L + + +R + E+ +L ++ +L Sbjct: 536 LNNLEREKTLNDIVIRIKANSLNHELNKTVDPKRMQEIIIEQ-QKLNQIHIKL 587 >UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXH2_HALOH Length = 599 Score = 499 bits (1286), Expect = e-140, Method: Composition-based stats. Identities = 158/454 (34%), Positives = 250/454 (55%), Gaps = 11/454 (2%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+++L DIVDL+ V LKK GKN+ CPFH EKTPSFTVN E+QF++CFGCG Sbjct: 6 EKFLDELKGSLDIVDLVSDYVDLKKVGKNYVGLCPFHQEKTPSFTVNPERQFFYCFGCGV 65 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I FLM + + F E+V+ LA +EVP + + +R+ L+++ F Sbjct: 66 GGDVISFLMEIENITFKESVKMLARRSGMEVP--GDDPRHRQQLREREKLFKINHLTAKF 123 Query: 127 YQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y L+ A YL+KRG + + I +F +G+AP WD +LK G L+ A Sbjct: 124 YHYLLLETDQGLKAINYLKKRGFTKKDIKKFGLGYAPDRWDGLLKFLTGKGFEEGELVKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGR 243 G+++ ++ YDRFR+R++FPI + RG V+ FGGR++ +D PKYLNSPET +F+KG+ Sbjct: 184 GLVLLSNNNNYYDRFRDRLIFPIFNSRGEVLAFGGRLIDSDESQPKYLNSPETPVFNKGK 243 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ + + + ++++EGY DV+ Q GIN VASLGT+ T++ +L+ R +N Sbjct: 244 NLYGLNWAKHEMRKSSEVIIMEGYTDVLRAHQMGINNVVASLGTALTSEQARLIARYSNL 303 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 YD D AG A R L+ G ++ + LP DPD +RK+G + F +E Sbjct: 304 AYISYDADTAGTKATLRGLDIL---KNAGLNVKVVDLPQDSDPDEYLRKKGVDEFYTLLE 360 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 +A+ L F + +DL+ G+ + + +++ + R Q + +K + Sbjct: 361 EAVDLVEFKIKQGLENIDLNNVQGKIEGTRKLVKILATLEDRIEREIYIQNVSDKFNLDP 420 Query: 424 D---SQLERLMPKAAESGVSRPVPQLKRTTMRIL 454 + S++E+L+ + K++ R Sbjct: 421 EILKSEVEKLIKINKNKDKNSSRRYTKKSNRRYF 454 >UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU Length = 603 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 164/568 (28%), Positives = 263/568 (46%), Gaps = 28/568 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP ++ + DIV++I V+LKKQG+N+ CPFH E TPSF+V+ +KQ +H Sbjct: 1 MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSFSVSPDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIERHQRQTLYQL 119 CFGCGA GN FL + F E+V LA + ++ P + ++ E Q + + Sbjct: 61 CFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDDITVHSGARPESSGEQKMAEA 120 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + L FY L A YL RG + E+I F IG+A WD + K + Sbjct: 121 HELLKKFYHHLLINTKEGQEALDYLLSRGFTKELINEFQIGYALDSWDFITKFLVKRGFS 180 Query: 179 RQSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + AG+L+ + G Y DRFR RVMFPI D G V+ F GR LG+ PKY+NSPET Sbjct: 181 EAQMEKAGLLIRREDGSGYFDRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSPETP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHK + LY Y+A+ + R ++ EG+ DV++ + ++A++GTS T DH+++L Sbjct: 241 LFHKSKLLYNFYKARLHIRKQERAVLFEGFADVISAVSSDVKESIATMGTSLTDDHVKIL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R +I CYD D+AG +A +A E G ++R +PDG DPD ++K G E Sbjct: 301 RRNVEEIILCYDSDKAGYEATLKASELL---QKKGCKVRVAMIPDGLDPDDYIKKFGGEK 357 Query: 358 FE-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+ ++ ++ + AF +LS R L IS + G + ++L Sbjct: 358 FKNDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLKEISTLSGSLEQEVYVKQLA 417 Query: 417 NKLGILDDSQLERL-------------------MPKAAESGVSRPVPQLKRTTMRILIGL 457 ++ + +S E+L + + R+L+ Sbjct: 418 SEFSLSQESLTEQLSVFSKQNKPADNSGETKTRRAHLTTKARQKRLRPAYENAERLLLAH 477 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 ++++ + V N L L LT L+ + + L Sbjct: 478 MLRDRSVIKKVIDRVGFQFNIDEHRALAAYLYAFYEEGAELTPQHLMARVTDDHISQLLS 537 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDS 545 + M ++ ++E +D + + + Sbjct: 538 DILMLQ--VNQELSEAELSDYVKKVLNQ 563 >UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_EUBR3 Length = 590 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 169/588 (28%), Positives = 281/588 (47%), Gaps = 22/588 (3%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 I ++ +R DIVD+I + V L+K+G + CPFHNEKT SF+V+ KQ Y+CFGCG Sbjct: 5 SDELIEEVRSRNDIVDVIGSYVHLQKKGSTYFGLCPFHNEKTGSFSVSPNKQMYYCFGCG 64 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN FLM Y+ F E ++ELA +E+P + + + E +R L ++ Sbjct: 65 AGGNVFTFLMQYENFTFPEAMQELADRVGIELPKQEMTSAQRREADRRTQLLEINKEAAK 124 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++ L+ P A +Y +KR LS E + +F +G++ D++ K + + L + Sbjct: 125 YFYMLLRGPRGQRAHEYFKKRELSDETMQKFGLGYSDQYSDDLYKYLRSKGYDDEILKET 184 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++ ++ +D+F R MFPI D RVIGFGGRV+G+ PKYLNSPET IF K R L Sbjct: 185 GLVTIDEVRGGHDKFWNRAMFPIMDVHNRVIGFGGRVMGDGEPKYLNSPETKIFDKSRNL 244 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL A+ N+LL+ EGYMDV+AL Q G + AVASLGT+ T+ H LL R TN V Sbjct: 245 YGLNIARST--RKNQLLLCEGYMDVIALHQAGFDNAVASLGTALTSGHASLLKRYTNEVY 302 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA RA+ G + + + +DPD ++ G + +E R+++A Sbjct: 303 LTYDSDGAGVKAALRAIPILKEV---GITTKVINMRPYKDPDEFIKALGAQEYEERIKKA 359 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 F + D+ P+ + + E R Q + + I D Sbjct: 360 ENSFMFQIRIMQAGYDMDDPESKTAFYNEIAKKLLGFTEELERTNYTQAVSREYSIPYDD 419 Query: 426 QLERLMPKAAESGVSRPVPQLK-------------RTTMRILIGLLVQNPELATLVPPLE 472 + + A + G+ +P +LK + + ++L+ L+++ L + Sbjct: 420 LRKLVNSMAMKGGIVKPQTKLKSGINEKNKKEDGMKQSQKLLLTWLIEDNSLFDRIKGRI 479 Query: 473 NLDENKLPGLGLFRELVNTCLSQPG-LTTGQLLEHYRGTNNAATLEKL--SMWDDIADKN 529 + D+ + V + + +++ + + + L + + KN Sbjct: 480 SADDFTEELYHKVAKEVFSQYETTHTVNPARIVSMFTDEDEQREVAGLFNATIHQVEGKN 539 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS-NEERLELWTLNQ 576 +++ + + ++ R + L + + E++ L L + Sbjct: 540 DKATALRETVVRIKQNSIDYRSKHLAPTDMEGMMRIIEDKRALEELQK 587 >UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaerobacterales RepID=Q8R969_THETN Length = 600 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 177/588 (30%), Positives = 277/588 (47%), Gaps = 25/588 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I ++ DIVD+I V+LK+ GK F CPFH EKTPSF V+ KQ YHCFGC A Sbjct: 5 RESIEKVIEANDIVDVISDYVELKRAGKEFRGLCPFHREKTPSFMVSPTKQVYHCFGCNA 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 GN + F+M+ + L F E +E LA + + S + + +Y++ F Sbjct: 65 SGNVVTFIMDIENLSFKEAIEFLAERAGIPLEEVDLSEEEAKRKKIIEEIYRVNKIAALF 124 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 + + L A +YL+ RGLS I +F IG+AP D++L G L AG Sbjct: 125 FHRKLFSEEGVKALEYLKSRGLSSTTIKKFGIGYAPSN-DDLLNFLKGKGYKENFLSKAG 183 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 ++V G+ YDRF++RVMFPI D RG V+GFGGR L + PKYLN+PET+IF KG+ L+ Sbjct: 184 LVV-YKSGKYYDRFKDRVMFPIIDVRGNVVGFGGRALDDSLPKYLNTPETEIFKKGKTLF 242 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R NV+ Sbjct: 243 AINFAKKT--QDDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRYKKNVVI 300 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 YD D AG +A R L+ ++ + +P+G+DPD ++KEG EAF +E A Sbjct: 301 AYDADEAGVNATLRGLDILEKLN---INIKVLSIPEGKDPDEFIKKEGSEAFRRLVENAE 357 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQ 426 L F D + R I+++ E R I +++ Sbjct: 358 SLIEFKSKIFKKGFDFEKVEDRIIYVKKIASEIAKISDEVKREVYISAAAKTAQIPENAV 417 Query: 427 LERLMPKAAESGVSRPV-------------PQLKRTTMRILIGLLVQNPELATLVPPLEN 473 + + K + + LI LL+ + L + + Sbjct: 418 RTEVDRFVKRETEKKQKFMYRTGNIRHNIYSSSKISPEKYLIALLLHDNNLYHKIKGVIK 477 Query: 474 LDENKLPGL-GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 D + L +F E+V++ + ++ + +N + + + + Sbjct: 478 PDMLEDSKLKPIFEEIVSSLEGGKQVQIKDIVYLIQEEDNLISDFN-DIVKALFEAEDLS 536 Query: 533 QTFTDSLNHMFDSLLELRQEELIARER-THGLSNEERLELWTLNQELA 579 Q D L + + L ++EE+ H L + E+ L +L Sbjct: 537 QMVDDILQKILLNNLARKREEIRKEILNAHLLGDVEKE--RELLIKLQ 582 >UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K885_THEP3 Length = 595 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 175/589 (29%), Positives = 270/589 (45%), Gaps = 24/589 (4%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 + I ++ DI+D+I V+LKK GK F CPFH EKTPSF V+ EKQ YHCFGC Sbjct: 4 SKEMIEKVIEANDIIDVISEYVELKKAGKEFKGLCPFHREKTPSFMVSQEKQVYHCFGCN 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN + F+M+ + L F E +E LA + + + + +Y++ Sbjct: 64 ASGNVVTFIMDIENLTFKEAIEFLADRVGITLEETVLTEREYQRKKLIDEIYKVNKLATM 123 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++ L A Y+ KRGL+ I +F IG++ P + +L L+ A Sbjct: 124 YFYNKLFSEEGRQALTYIRKRGLTEATIKKFGIGYSSPHGNGLLNFLKEKGYTESFLVKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+L + R YDRFR RVMFPI D +G VIGFGGR + + PKYLN+PET++F KG+ L Sbjct: 184 GLLSQKNN-RYYDRFRNRVMFPIIDVKGNVIGFGGRSIDDSLPKYLNTPETEVFKKGKTL 242 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 + + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R NV+ Sbjct: 243 FAINFAKKT--QQDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRYKGNVV 300 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA R L+ ++ + +P G+DPD ++KEG AF +E A Sbjct: 301 IAYDADEAGISAALRGLDILDELN---LNIKVLTIPYGKDPDEFIKKEGVNAFNQLIENA 357 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 L F +DL P R I+++ E R I +++ Sbjct: 358 DSLIEFKAKVFRKNLDLDNPQDRIIYVKKIAKDIAKLSDEVKREVYISSAAKVAQIPENA 417 Query: 426 QLERLMPKAAESGVSRPVP-------------QLKRTTMRILIGLLVQNPELATLVPPLE 472 + K + + LI LL+ + L V Sbjct: 418 VRTEVARFVNREIEKNQKNMYMAGNIRHNIYSSSKISPEKYLIALLLYDNNLYKRVKETI 477 Query: 473 NLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 D + +F E+++ ++ + N + + + +N+ Sbjct: 478 TADMLENVKLKPIFGEIMSRLEDGKKTQINDIVYLLQEENLISDFNDI-IKAFYESENVT 536 Query: 532 EQTFTDSLNH-MFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 EQ D +N + +SL R++ A H L + E+ L EL Sbjct: 537 EQAVDDIINKILINSLAVKREKIKRAINEAHMLGDIEKE--RQLLIELQ 583 >UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A142_PELCD Length = 604 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 183/607 (30%), Positives = 292/607 (48%), Gaps = 34/607 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRI + ++ AR DIV++I + V LK+ G+N CPFH EKTPSF VN ++Q YH Sbjct: 1 MSGRIADEKVEEIRARADIVEVISSYVSLKRSGRNHVGLCPFHAEKTPSFNVNADRQIYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLMN + L F E V L + +EV EA S + R +R+ L ++ Sbjct: 61 CFGCEVGGDVFAFLMNIEGLAFPEAVRRLGERYGIEVEEEAVSPEEEQRREERERLLRVT 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L + P AR YL +RG ++ +F +G+AP W+ + + Sbjct: 121 EVACDFYHNLLLKDPSGKPARGYLRRRGFDGDIARQFRLGWAPAAWEALANHLRDKGFDS 180 Query: 180 QSLID-AGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + D G++ ++GR YD FR R++FPI D+RGR + FGGR+L D PKY+NSPE+ Sbjct: 181 KWARDRLGLVRAGNEGRNDYDLFRRRLLFPILDERGRPVAFGGRILEGDGPKYINSPESP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK R LYGLY+A+ +VVEGY D +AL + G VA+ GT+ T +H++LL Sbjct: 241 IYHKARVLYGLYQARDAMRHKGEAIVVEGYFDQLALYRAGFQNTVATCGTALTPEHVRLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R V+ +D D AGR A +RA++ LP +G Q + L GEDPD+ +R + Sbjct: 301 KRFAERVLLLFDQDEAGRKATFRAMDVLLP---EGLQALVVTLDAGEDPDSFLRNHDAQK 357 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +AR+ A P+ + Q +GRAR L + +PG+ R ++L + Sbjct: 358 MQARLASARPVVEVFIERTLEQHG-EDIEGRARAVEKILAKLRLLPGDIERDLYLKDLAS 416 Query: 418 KLGILDDSQLERLMPKAAESGVS------RPVPQLKRT-------------TMRILIGLL 458 + G+ + + +P+A RP P ++ RIL+ L+ Sbjct: 417 RTGLDEQLLRSKALPQAVPDPAPSSVPAVRPKPAARQAVPAKKTRRGVAEKAQRILLRLI 476 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 + L + + L + E ++ + ++ + Sbjct: 477 LCYESACDAARNLGLGELFEEGDLRILAERALSVSAESGPVAENMRIDDLSESQKGLLSG 536 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL--IARERTHGLSNEE----RLEL 571 L + + +N ++ F + ++ R ++L + RE G E + E Sbjct: 537 ILLEDEGLFAENY-DELFRKCHEMVNKERMKQRLQQLQELMREAERGQDFTEMTVWQREF 595 Query: 572 WTLNQEL 578 L ++L Sbjct: 596 QELTRKL 602 >UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_STRCO Length = 641 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 169/530 (31%), Positives = 256/530 (48%), Gaps = 45/530 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + I ++ ++L+ G N CPFH+EK+PSF V+ K F+ Sbjct: 1 MAGRINDEDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGFF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I F+M D L F E VE LA + + +E G +R +R L + Sbjct: 61 HCFGCQEGGDTITFVMKIDHLTFSEAVERLAGQAGITLRYEEGGYNPSHQRGERIRLVEA 120 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +Y + L P A + R +L RG F +G++P GWD++ + G + Sbjct: 121 HKIAAQWYAEQLATGPEADTGRAFLADRGFDQAAAEHFGVGYSPQGWDHLTRFLRGKGFS 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + L+ +G+ +G DRFR R+M+PIRD G V+GFG R L ++ PKYLN+P+T Sbjct: 181 DKELLLSGLSQEGRRG-PIDRFRGRLMWPIRDIGGDVVGFGARKLYEADNGPKYLNTPDT 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DHI++ Sbjct: 240 AIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKI 299 Query: 297 LFR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 L R + VI +DGD AG+ AA RA E + + PDG DP L Sbjct: 300 LRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAAE---TYIAIAPDGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +G +A +E PL F ++ + DL TP GRA A P+++++ + + Sbjct: 357 AKGDDAVADLVEPRTPLFEFALRQIVARYDLDTPAGRAAALDEAAPVVARIKNSGAQHEV 416 Query: 412 RQELGNKLGILDD----SQLERLMPKAAESGVSRPVPQLKR------------------- 448 +L LGILD ++ +L A + G P P ++ Sbjct: 417 AVQLAGMLGILDTQFVVKRIAQLARWARDRGGKGPAPDQRQRGGGPQQQAGPMTATPRGP 476 Query: 449 ---------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV 489 T R L+ L +Q PEL + +DE P RE + Sbjct: 477 ALNLRNPVFATERELLKLALQRPELVSPAFDAYGVDEFTAPPYAAVREAI 526 >UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 RepID=B6BW93_9PROT Length = 578 Score = 497 bits (1279), Expect = e-139, Method: Composition-based stats. Identities = 208/584 (35%), Positives = 317/584 (54%), Gaps = 23/584 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI ++L R D+VD++D RVKLKK G N+ ACCPFH EK+PSFTV+ KQFYHCFG Sbjct: 1 MIPESFIQEILNRIDVVDVVDQRVKLKKAGANYVACCPFHQEKSPSFTVSPSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+AI FLM YD L F+E+V+ +A L VP + + + ++ L +++ Sbjct: 61 CGAHGSAISFLMEYDGLTFIESVQSIANQLGLAVPNDQSN--VKKDKADEFKLEEILKRA 118 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 N ++++L+ + A YL+KRGL+ V F IG+A W + K F L Sbjct: 119 NQHFKKNLRS--SELAINYLKKRGLTGTVAREFQIGYASDDWQGLKKEFEN--YEEPKLQ 174 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKG 242 AG++ ND G+ YDRFR R++FPI + + +IGFGGRV+ D PKY NSPET +F K Sbjct: 175 TAGLVQKNDSGKIYDRFRNRIIFPIINAKDNIIGFGGRVINKEDQPKYYNSPETPLFKKS 234 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++YGL +A++ E N +L+VEGYMDV++L Q+GI AVA+LGT+TT H++ L R + Sbjct: 235 YEVYGLPQAKKGIREDNNILIVEGYMDVISLYQHGIENAVATLGTATTIYHLKKLIRYSK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + C+DGD AG++AAW+AL TA+ + D + F+FLP+GEDPDT + K + F+ + Sbjct: 295 KITFCFDGDHAGKEAAWKALNTAVEILEDDYEFYFLFLPEGEDPDTFITKNSIQDFKKYI 354 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + A PL+ F+ L + DL++ + + + P+ ++ +I+L + + + + Sbjct: 355 DHATPLTEFIVKRLTEKNDLTSQENKIKFINNFEPIYKKINSNKYKIFLIKRIADLIH-F 413 Query: 423 DDSQLERLMPKAAESGVS-------RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 ++E++M + S P + T R I +LV PEL E Sbjct: 414 SQREIEKMMRIESAENYSSSQQIKYSPSTRNSLTAKRKYILILVMKPELFN--SDDEVFF 471 Query: 476 ENKLPGLGLFRELVNTCLSQPG--LTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI-AE 532 ++ L LF ++ T LL + L +L +NI Sbjct: 472 QSNLIEDELFNKIKKLLEENDSNIKNTASLLHSLVNKVDENILNELQKQMMDYSENIDLL 531 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTH---GLSNEERLELWT 573 + F N L + +Q + A + LS+EE+ L Sbjct: 532 EEFKGIQNSFSHQLNKTQQSQQFAALKNKKLSELSDEEKEFLKN 575 >UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RX1_SYMTH Length = 623 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 184/605 (30%), Positives = 284/605 (46%), Gaps = 51/605 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R + F +++ AR DIV++I A VKL+++G + CPFH+EKTPSF V + QFY+ Sbjct: 1 MA-RFDQAFKDEVRARNDIVEVISAYVKLERRGNRYVGLCPFHSEKTPSFHVVPDGQFYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ FLM + L F E + +LA + +P E + + +R+ +Y + Sbjct: 60 CFGCKASGDVFTFLMEREHLTFYEALVQLAQRARIPLPQEERTPEEERAYRERRDMYAAL 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D FY L P YL RGL+ E I RF +G+AP G + + Q Sbjct: 120 DLAARFYHHQLFTPAGKPGLDYLLGRGLTEETIRRFRLGWAP-GRGALFRALRDR-FPPQ 177 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG++V G + D F ERVMFPI D GRVIGFGGR+LG + KY N+ ET +F Sbjct: 178 ILQKAGLIVPRRDGPGFMDVFFERVMFPIADLSGRVIGFGGRILGGEGAKYKNTAETPLF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K L+GL +A++ N+ ++VEGYMDV+ Q GI VA LGT+ T + ++++ + Sbjct: 238 VKRHVLFGLDQAKEAMRARNQAILVEGYMDVLMPHQAGIQNVVAPLGTALTDEQVRIIRQ 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 VI +D D AG+ A R L+ G +R + LPDG+DPD +R G AF Sbjct: 298 QAQQVIVAFDMDTAGQLATLRGLQ---KLYDSGCDVRVLQLPDGKDPDEFIRTHGAPAFV 354 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R+EQA+PL F + +P TP+ A+ +++ V E +R ++ ++L Sbjct: 355 ERIEQALPLIEFRLSLALPATRRPTPEEMAKAVESVAQVLADVRNEVVREAYVDQVADRL 414 Query: 420 G-----------ILDDSQLERLMPKA------------------AESGVSRPVP------ 444 + D Q+ RL+ + A G +RP P Sbjct: 415 AGDNPLAKPDLKLAIDRQMNRLLRRGFQHNLPDSRNNRRGPGAPASPGPTRPRPDQAPVT 474 Query: 445 --QLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP-----G 497 + R R+L+ LL+++P L V + P L++ G Sbjct: 475 QAEGARRAERVLLYLLLEHPGLLRTVEAELGEEPFSDPHHRQIYRAGRALLAEADPLAGG 534 Query: 498 LTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR 557 +L + L ++++ + E+ D + + R E+L + Sbjct: 535 GVIARLFDRLSDPEARQVLTEMAVTPMLTSDP--EKEAADCIEKIRKHRDSRRLEDLENQ 592 Query: 558 ERTHG 562 + Sbjct: 593 IKAAA 597 >UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG56_HELMI Length = 656 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 185/635 (29%), Positives = 289/635 (45%), Gaps = 67/635 (10%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 ++++ R DIV+++ V LK+QG + CPFH+EKTPSFTV+ +KQ++HCFGCG Sbjct: 3 DPQIVDEIRHRLDIVEIVADYVALKRQGGRYVGLCPFHSEKTPSFTVSRDKQYFHCFGCG 62 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+M + L F E +++LA + +P + Q +R + L Sbjct: 63 TGGDVFTFVMLRENLTFPEALKKLAERAGVTLPERKLTPTQQAQRTAVERGRALHKRAAE 122 Query: 126 FYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 Y + L++ A R+YL +RG+S V F +GFAPPGW+ + R + L Sbjct: 123 LYFRCLREDARARPGREYLSRRGVSDSVAVDFGLGFAPPGWEFLATRLQQEGYLPEELER 182 Query: 185 AGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G++V G YDRFR R++FPI D +GR + FGGRVL + PKYLNSPET ++ KG+ Sbjct: 183 FGLIVPRQGGEGYYDRFRNRIIFPIFDAQGRPVAFGGRVLDDAVPKYLNSPETPLYKKGQ 242 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL +A E ++VEGYMDV+A Q+GI AVASLGT+ T + +LL R Sbjct: 243 HLYGLNKAGSAIREKGVAVLVEGYMDVIACHQHGIRQAVASLGTAMTPEQGRLLLRYGPR 302 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ CYD DRAG +AA +A G Q++ + LP+G+DPD +++ G ++F E Sbjct: 303 VLICYDSDRAGVEAAVKA---GGILTALGAQIQVLTLPEGKDPDEYLQRHGADSFWLAAE 359 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA F ++ DLS+ G+A + L+ +P + Q L +L + + Sbjct: 360 QAPSFFTFCYSRAAAAQDLSSAVGKASVVRELASLLLTMPSAVEQEANIQWLARELRLSE 419 Query: 424 DSQLERLMPKAAES--------------GVSRPV-------------------------- 443 + +E + A + S P Sbjct: 420 AAVMEEIRGYARNARAPGMRKENIRHTISASAPAWGDGDAGTQAAPGDAGAADGLTARSA 479 Query: 444 ---------PQLKRTTMRILIGLLVQNPELATLVPPL--ENLDENKLPGLGLFRELVNTC 492 K R L+ ++++P+ V E + P + L C Sbjct: 480 GGGEQRQHSANRKEQAWRYLLYWMIEDPDRVRWVFERLGEEIPRADEPLGEILAALTAVC 539 Query: 493 LSQPGLT-TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQ 551 + G++ E L L + D + + + E D +N + L Sbjct: 540 DEGGRGSLAGRVAERLSTDKAKGYLSALLVEDILCREPVIE----DCINTLRYGWLTEEI 595 Query: 552 EELIAR----ERTHGLSNEERL--ELWTLNQELAK 580 L ++ R+ + +RL L L Q + Sbjct: 596 ASLESQVDAFSRSGDMEAMQRLLPRLAKLQQARNR 630 >UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB Length = 596 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 176/597 (29%), Positives = 294/597 (49%), Gaps = 30/597 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I I + DIVD++ +VKLK+ G+N+ CPFH+EKTPSF+V+ +KQ Y CFGC Sbjct: 6 IAEDIIQKVKDLNDIVDIVSEKVKLKRTGRNYSGLCPFHHEKTPSFSVSQDKQIYKCFGC 65 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GN I F+M FVE V+ LA N+ + + + + LY + Sbjct: 66 GEAGNVITFVMKTKNFSFVEAVKYLADKVNITID-DNKDKYYAKNKEKYDKLYSMNVEAA 124 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ ++L + A++Y RG++ + + RF +G+A W +L LI+ Sbjct: 125 RYFFRNLDS--NSKAKKYFLDRGINQKTMRRFGLGYAKDDWRQLLSFMKSKGYTELELIE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG++V ++ YDRFR RV+FP+ D +G+VIGFGGRVL + PKYLNSPET IF KG Sbjct: 183 AGLIVQKNK-AVYDRFRNRVIFPVFDYKGKVIGFGGRVLDDSKPKYLNSPETKIFKKGTN 241 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A ++N + +++VEGYMD ++L QYGIN VASLGT+ T D +LL R + V Sbjct: 242 LYGLNFAVKNNI-GDTIIIVEGYMDCISLHQYGINNVVASLGTALTKDQAKLLKRYASKV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + YD D AG+ A R + G ++ + +PDG+DPD VRK GKEAF +E Sbjct: 301 VISYDADTAGQAATLRGFDIL---REAGFDIKIIKIPDGKDPDEFVRKNGKEAFMRLVEN 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+ + + N V+L + + +I ++ + +++ +K GI + Sbjct: 358 AVSIIDYRINRAFENVNLKDSESVIKYVKDISEIIEEL-DPVEKDVYIKKISDKTGIREQ 416 Query: 425 SQLERLMPKAAESGVSRP-------------VPQLKRTTMRILIGLLVQNPELATLVPPL 471 + + + +SG + V + R L+ L++++ ++ + + Sbjct: 417 AIYDLISTDIQKSGNNIEKMNKNSNYGQNLYVESAHVKSERYLLRLMIEHKDIRSYIESK 476 Query: 472 ENLDENKLPGLGLFRELV----NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 + D+ + ++ + S G + +++ + K+ + + Sbjct: 477 ISADDLIMESHKKIYNIILNFEDNLSSDLKSKFGFIESRCDDGESSSEIVKIEEQNIMLS 536 Query: 528 KNIAEQTFTDSLNHMFDSLLE---LRQEELIARERTHGLSNEERLELWTLNQELAKK 581 +N + D + ++ LE + I GL +E +EL +E+ + Sbjct: 537 ENNVKDLVDDFITNIKKFRLEESKKKIMSEIKGLEEKGL-FDETIELIKRMEEIQNQ 592 >UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT Length = 602 Score = 496 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 172/595 (28%), Positives = 279/595 (46%), Gaps = 24/595 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP I ++A D+VD+I LK+ G + A CPFHNEKTPSFTVN ++Q + CFG Sbjct: 3 LIPPEIIEQVIAANDVVDVIGGYFPLKRSGPVYKAICPFHNEKTPSFTVNPQRQIFKCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN + F+MNY+ L+F+ V++LA +++ S E + L L Sbjct: 63 CGAGGNVLRFVMNYENLDFLGAVKKLAERAGIKIEQTELSAEQAAEYSMLRRLLALHAEA 122 Query: 124 NTFYQ-QSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ +++P A AR YL+ RG+ +V + +G+AP WD + + + L Sbjct: 123 ADFFHWHLMKKPSAQIARDYLKSRGIGADVARAWKLGYAPDEWDAMRDFADSRGFSDEEL 182 Query: 183 IDAGMLVTND----QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPET 236 + +G++ D + YDRFR RVMFPI VI F GRVL D KY+NSPET Sbjct: 183 VASGLVKLRDEENPRSEFYDRFRARVMFPICKDTDEVIAFSGRVLQADAKAAKYVNSPET 242 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F KG L+GL ++++ E +V EG +D++ ++G+ +A GT+ T + Sbjct: 243 MLFKKGAVLFGLNKSKRALIEAKSAIVCEGQLDLITAFEHGVQNVIAPQGTAFTEKQAHI 302 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R V+ C+D D AG AA R+L + L + +R +P GEDPD+++R +G + Sbjct: 303 LKRFVEEVVLCFDADVAGEKAAERSLASLL---AENLLVRVAGMPQGEDPDSMIRGKGAD 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AF ++ A + + ++ D +TP G+ + IS + LR + + Sbjct: 360 AFREQIAGARDFFDYQLDRMVAGPDFNTPRGKMQAVRKMAEFISLIRDSVLRETVMNRVT 419 Query: 417 NKLGILDDSQLERLMPKAAE--------SGVSRPVPQLKRTTMRILIGLLVQNPELAT-- 466 +L I + L ++ + + P P + +T+R+L + +++ Sbjct: 420 QRLEISAQEFVRLLKAPPSKTPDPLSTVTATAPPDPFAEDSTIRLLATVALRDAAAREWL 479 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 L P +++ ++L L + L + + T AA L Sbjct: 480 LAEPWDSVLRDQLDAELLVKILRADIQPDDDASVHVFMTTLSATEEAAISGLLEEKMLAH 539 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 I D + + R E AR RT L + ER E+ +L K+ Sbjct: 540 PMTIV----HDCWRELERRKIRHRVEATQARLRTPDLPDTERAEMLKEILDLQKR 590 >UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I6N0_CLOCE Length = 604 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 177/602 (29%), Positives = 295/602 (49%), Gaps = 34/602 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKNF CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGIISEYVKLEKKGKNFFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN I F+M+ + LEF + + LA + +P + + ++ L Q+ Sbjct: 61 CFGCGKGGNVIHFIMSIENLEFPDALRFLADRAKILIPDMIEGNRNDEKAGLKRELLQIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F++ +L YL R + +A+F +G+A +D + K + Sbjct: 121 LEAARFFRDNLNNDKNKLPNSYLINRKIQKNTVAKFGLGYAEDRFDTLYKHLKAKGFSDT 180 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 S+ ++G+++ + G YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET+++ Sbjct: 181 SIKNSGLVIYKEESGNIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+ LY L A+ + RL++ EGYMDV++L Q GI +VA LGT+ T + +LL + Sbjct: 241 HKGKHLYALNFAKNTCSR--RLILAEGYMDVISLHQSGILNSVAPLGTALTENQGRLLKK 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +D D AGR AA+R+L+ G ++ + +P G+DPD ++ G F+ Sbjct: 299 YTEEIVLSFDSDSAGRAAAFRSLDLLNEI---GCNVKVLTIPSGKDPDEFIKAYGVAEFK 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L +L Sbjct: 356 RLVDRSESLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSEEL 415 Query: 420 GILDDSQLERLMPKAAESGVS---------------RPVPQLKRTTMR-------ILIGL 457 G+ S + + S + R +K R +L + Sbjct: 416 GVSTQSIFSEMAKQQRNSVIKVRQAASNKNFSRNQIRKSTVVKNQEERLVRLQLMLLATI 475 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 + N ++ + + F+ V S+ G+ TG++L A + Sbjct: 476 CLDNSVYFSIKGSFDWDKFDSDEIKKAFKFAVERIESKAGILTGEILNKL-SPGMAESFA 534 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 + I + N ++ D + ++ LE R+ E+I ++ L+ + LN+E Sbjct: 535 NIVQSQSIFEDN--KKAALDIIRNIDLFGLEERKNEIIELKKRSDLTEGDVE---LLNRE 589 Query: 578 LA 579 L+ Sbjct: 590 LS 591 >UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5T2_MAGSM Length = 639 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 231/616 (37%), Positives = 325/616 (52%), Gaps = 48/616 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P F++ L R DIVD+I+ ++ LKKQG+N+ CPFH+EK+PSF+VN EK FY Sbjct: 1 MA-YFPDTFLDQLKERVDIVDVIERQLPLKKQGRNWIGLCPFHHEKSPSFSVNQEKGFYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQL 119 CFGCGA G+AI F+ + F E + ELAA L +P E P+Q + + +R L L Sbjct: 60 CFGCGASGDAIKFVQQTRGIPFEEAIRELAAQAGLPLPQEQRQNPAQAQAKEKRDRLRAL 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ F+Q L+ P AR YL++RGL+ E I+ + +GFAP GW N+L FGG Sbjct: 120 LEESKRFFQGQLRAPNGGLARAYLQRRGLTAETISSYELGFAPAGWRNLLDFFGGGDSAI 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + +++AG+LV + G YDRFR R++FPI D RGR I FGGRVL ++ PKY+NSPET ++ Sbjct: 180 ELMLEAGLLVKKEDGSVYDRFRNRIIFPILDSRGRCIAFGGRVLTDEKPKYINSPETPLY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K LY L AQ+ + LVVEGYMD V LA++ + VA+LGT+ T H++LL++ Sbjct: 240 NKSEVLYALNRAQERWSRGEMALVVEGYMDAVMLAEHHLTGTVATLGTAVTEQHLKLLWQ 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN +I C+DGD AGR AAWRALE L + R ++F+FLP+GEDPD+LV+KEG + F+ Sbjct: 300 RTNRIIFCFDGDAAGRRAAWRALERGLQGLQADRHMQFLFLPEGEDPDSLVQKEGVQRFK 359 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R A + + Q+DL TP+GRA PLI+ V LR +LG+KL Sbjct: 360 ERANGAYSPMQLMHKVMGEQLDLYTPEGRAAAVHRMRPLITSVADPVLRQLYADDLGHKL 419 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQL----------------KRTTMRILIG-----LL 458 G + +QL A + + P +R R I Sbjct: 420 GGVSGAQLLYGGESPAPATPAWPGSTPYGEGHAPRFPVRSGGSRRAEWRNTIKNRGGWQP 479 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEH--------YRGT 510 Q P V L L ++ G + L+ L+ P L LLEH + T Sbjct: 480 AQKPSWEQEVSSL--LLGGEVRGRDFEQALLAQLLNDPRL----LLEHQETLSTIQLKNT 533 Query: 511 NNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLE 570 L +L D +Q F S++ + D ++ E+T LE Sbjct: 534 QLNQLLTELLEVG--PDLQHLDQPF--SIDQLKDGQSAQLARRILLEEQTPLDDPARELE 589 Query: 571 -------LWTLNQELA 579 L L QE+ Sbjct: 590 GCMKTDQLRQLQQEMV 605 >UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN Length = 634 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 193/600 (32%), Positives = 296/600 (49%), Gaps = 36/600 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P FI+++ AR + +++ RVKLK+ G+ F PF EKTPSFTVN +KQFYH F Sbjct: 2 RFPPSFIDEVKARLPVSEVVGRRVKLKRAGREFKGLSPFQQEKTPSFTVNDQKQFYHDFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HGN DF+M + + F E VE LAAM L +P + + +R R++L+++M+ Sbjct: 62 TGKHGNIFDFVMETEGVSFPEAVERLAAMAGLPLPRNSREDEQREQR--RKSLFEVMELA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +++Q+L V AR YL R + I F IG+A + + G +I Sbjct: 120 AKYFEQNLASRVGAQARGYLSDRAIVPSSIVEFRIGYATADRFALKEYLGSKGVPVADMI 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHK 241 +AG+L+ D YDRFR+R+M PI D+RGR++GFGGR L D PKYLNSPET IFHK Sbjct: 180 EAGLLIAGDDIPVPYDRFRDRIMIPIHDQRGRLVGFGGRALRKDVQPKYLNSPETPIFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G ++ + A+Q E N ++ VEGYMD +A+ Q GI VA++GT+ T + I L+R + Sbjct: 240 GSVVFNFHRARQPAHEANSVVAVEGYMDAIAVYQAGIKAVVATMGTAFTEEQIATLWRLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + C+D DRAG AA+R+++ LP + G+ RF+F+ + +DPD L+R++G EAF Sbjct: 300 PEPVVCFDSDRAGVAAAYRSIDRILPLLRVGKTFRFVFMDEQKDPDDLIREKGVEAFRNV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL----RQELGN 417 + ++PL L+ D+ TPD +A L L+ + + R +L N Sbjct: 360 LSGSLPLWDVLWQRETDGQDVRTPDKQAALEQRLYALVRTIQDPAVNTAFFRTSRMQLAN 419 Query: 418 KLGILDDSQLERLMPKAAESGVSRPV--------PQLKRTTMRILIGLLVQNPELATLVP 469 Q+ R + + S+ V + ++L+G+LVQ PEL Sbjct: 420 LFW-----QVNRGPSRNQKEAGSKFVRNELRIRGEDQRSGLQKVLLGMLVQYPELLEDKR 474 Query: 470 PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE------------ 517 + + L +++ L+ + E TL+ Sbjct: 475 DVVLRLQFPDAFDQFLSHLFQLLVTEAKLSVSVIWERL-DHEFYETLQTVHGDAGAGKPR 533 Query: 518 --KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 +L + + + L+H LL + EE I R R +E LN Sbjct: 534 GHRLFERFPVLKNDPPSDFVSGCLDHFIRILLWHQLEEDIERARLDAGEGDETAVARLLN 593 >UniRef50_O52200 DNA primase n=45 Tax=Actinomycetales RepID=PRIM_MYCS2 Length = 636 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 175/602 (29%), Positives = 268/602 (44%), Gaps = 41/602 (6%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFYH 60 GRIP I + + I D++ V+L++ G + CPFH+EKTPSF V +H Sbjct: 5 GGRIPDRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFH 64 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS-QIERHQRQTLYQL 119 CFGCG G+ F+ + + FVE VE LA V + S + Q +R R L Sbjct: 65 CFGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVTYTGSSTTNVQRDRGSRSRLLAA 124 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY ++LQ A ARQYL +R A+F G+AP GWD + K Sbjct: 125 NAAAAEFYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEF 184 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP---KYLNSPET 236 + L AG+ +G DRF R+++PIR G IGFG R L +D P KY+N+PET Sbjct: 185 KELEAAGLSREGKRGPM-DRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPET 243 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 ++ K + L+GL A++D A+ ++ +VVEGY DV+A+ G+ AVAS GT+ H+ + Sbjct: 244 VLYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSM 303 Query: 297 LFRAT-------NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 L R +I +DGD AGR AA +A E Q DG DP L Sbjct: 304 LRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNL---SGQSFVAVAADGMDPCDL 360 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + G A + + PL F+ S + + DL + +GR +P+++++ TLR Sbjct: 361 RLRSGDGALRDLVARRTPLFEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRD 420 Query: 410 YLRQELGNKLGILDDSQL------------ERLMPKAAESGVSRPVPQLKRT-------- 449 ++L +G + +Q+ + + + +RP P + Sbjct: 421 EYARQLAGWVGWDNVAQVIGRVREEAKGGGRKDNNRRGQETAARPKPPPVQRPDPTDPTL 480 Query: 450 -TMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC-LSQPGLTTGQLLEHY 507 R + +Q P LA V ++ PG G R + + G+T Q +E Sbjct: 481 WPQREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWIETV 540 Query: 508 RGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 R + L + N+ + L S+L QE + R+ S + Sbjct: 541 REQTTSPAAANLVNELSVETINVEDDE---KLPRYISSVLARLQEVWVGRQIAEVKSKLQ 597 Query: 568 RL 569 R+ Sbjct: 598 RM 599 >UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K3_DESAS Length = 599 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 190/607 (31%), Positives = 289/607 (47%), Gaps = 37/607 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP+ I ++ R+DIV +I V LK++GKN+ CPFH EKT SF+VN EKQ +H Sbjct: 1 MRGVIPQEIIEEVRVRSDIVQVISEYVPLKRKGKNYIGYCPFHQEKTASFSVNREKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLM + + F E V +LA N+++P E S E+ +RQ +++ Sbjct: 61 CFGCHTGGDIFRFLMLQEAISFPEAVRKLAQTLNIDLPVELDPK-SLDEKRKRQAAWEIN 119 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN-PEN 178 D FY L +A AR YL KRG+SH++ F +G+APP WD++ + Sbjct: 120 DLAKNFYNYVLLNHKIAQPARDYLVKRGISHDIAQSFELGYAPPRWDSLALYLQKKHGID 179 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETD 237 + +++ G+ N GR YDRFR R++FPI ++ G+ IGFGGR L D PKYLNSPET Sbjct: 180 YEKMLELGLCAVNKSGRRYDRFRHRLIFPIINETGKTIGFGGRALDETDNPKYLNSPETK 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 F+KG+ LYGL+ A+Q E +V+EGYMDVV GI AVASLGTS T + +LL Sbjct: 240 YFNKGQTLYGLHLARQGIREKGFAIVMEGYMDVVTAHFAGIKNAVASLGTSLTLEQGKLL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T +VI YD D+AG A RAL+ G +R + +PDG+DPD +R G A Sbjct: 300 MRYTTDVILAYDSDQAGIKATLRALDILQKL---GFNVRVVTVPDGKDPDGFIRMAGTGA 356 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 FE +E+A+ L + V + + + LP ++ + R ++ Sbjct: 357 FENLIEKALDLVEYKLWQFENSVGHNLSFADKMNAVQTILPNLNYMYSAVEREEAAKKAA 416 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQ---------------------LKRTTMRILI 455 + L I ++ + + ++ + L+ Sbjct: 417 SLLKISWEAIYSDFLRYKKNTEKNQQTRTNYDKNVNNKHNLINHGQNKMDAVEKAEQGLL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT--GQLLEHYRGTNNA 513 L ++NP + ++++ + L + L + Sbjct: 477 ILALENPSWVETIKKGLGEVFFSNKE---YQKIFDLLLRESTKNDYQASCLFSFLDDREQ 533 Query: 514 ATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 L L + Q +D + + S+ + Q EL+ ++ N +R L Sbjct: 534 NILSYLLSKK--IPGDNLVQIISDFIITVKRSIYK-EQHELLLKKLAEAEKNNDRESLSQ 590 Query: 574 LNQELAK 580 + QEL K Sbjct: 591 ILQELQK 597 >UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK00_DESAH Length = 602 Score = 494 bits (1272), Expect = e-138, Method: Composition-based stats. Identities = 179/600 (29%), Positives = 293/600 (48%), Gaps = 29/600 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ I++++ +DIV++I V LKK G+N+ CPFH+EK+PSF+V+ EKQ +HCFG Sbjct: 2 LIPQEKISEIINASDIVEVISEVVLLKKSGRNYFGLCPFHSEKSPSFSVSPEKQIFHCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C A GN FLM + + F E V+ AA +N+ V + + ++ L +L + Sbjct: 62 CSAGGNVFSFLMRHHGISFPEAVKMAAARYNIVVEMGSVDPERKRRIALKEELLRLNTAV 121 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y+ L P A AR YL RG++ E I F++G+A WD++++ F R Sbjct: 122 MKHYKVLLTDSPGAQGARNYLRDRGITPETIDTFSLGYAEDRWDDMVRFFRHLKLGRNLA 181 Query: 183 IDAGMLVTN-----DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 +G+++ + YDRFR R++FPI D +V GFGGRV+ + PKYLNSPET Sbjct: 182 EQSGLVLERASDRGGKKGYYDRFRNRIVFPIVDTNMQVAGFGGRVMDDSMPKYLNSPETP 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ KG+ LYGL+ A+Q + + + +VEGY D ++L Q GI VASLGT+ T DH++ L Sbjct: 242 VYSKGQILYGLHLAKQYCRQVDCVYIVEGYFDFLSLFQNGIKNTVASLGTALTVDHVRRL 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + +D D AG +AA R + T + +G +R + LP G DPD+ V EG +A Sbjct: 302 KGFATRAVLVFDSDNAGINAAKRCVST---FAAEGVDVRILVLPKGHDPDSFVNSEGADA 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F+ +QAM + FL ++ M + S+ +GR + ++++ R + L Sbjct: 359 FKRAADQAMSVMDFLTDTAMKKHG-SSVEGRIAVLEEMKLPLARIEDSAARSLYVRGLAE 417 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQL----------------KRTTMRILIGLLVQN 461 +LGI + + LER+ + G +PV ++ +++Q+ Sbjct: 418 QLGIDESAVLERVRNVVSTQGGGQPVSLPGNGDLSDPDDSGETLESYRREEQMLAMIIQH 477 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 PE+ LD +V G+ L+ + + L+M Sbjct: 478 PEVGREALNQGVLDHFYCERFRRIGRIVAEQDGNEGMMAADLMAAMADDQDRQLVASLAM 537 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 D + ++ E+ L + + L + R + RL L ++ K+ Sbjct: 538 MDGGLEGDVLEKAV--FLMKRIVKVRVKTENTLANQIRRAEQGGDSRLPF-ELLKKRQKE 594 >UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E613_GEOLS Length = 588 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 168/581 (28%), Positives = 268/581 (46%), Gaps = 19/581 (3%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + ++ R I ++I V LK+ G NF CPFH EKTPSF VN ++ +HCFGCGA Sbjct: 4 NDTVREVAERLSIAEIIGEYVSLKRSGSNFLGLCPFHGEKTPSFNVNPAREIFHCFGCGA 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ F+M + + F E + +LAA + + + + + +R +M Sbjct: 64 GGDIFSFVMKIEGISFPEALRKLAARAGVAIEDRPLTDAEKQLKTERDQQRAIMLLTAQH 123 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y+++L +QP AR YL++R + E A + +G+AP D +++ + Sbjct: 124 YRETLTRQPEGAVARSYLQEREVDPETAAAYGLGYAPERRDTLIQLLRAKGLPLEQAEQL 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++ D+G YD R++FPIRDK+G+ IGF GRVL N PKY+NSPE+ ++ K L Sbjct: 184 GIIRRGDRG-WYDLLHHRLIFPIRDKQGQPIGFAGRVLDNSLPKYINSPESPLYRKSSVL 242 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 +G+ A +D + ++VEGY D +AL + GI A+A+ GT+ T HI LL + V Sbjct: 243 FGVDLALRDIRQSGTAIIVEGYFDHLALYRAGIRNALATCGTALTDGHISLLKKHAQRVC 302 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +DGD AGR A RA+E L + + LP GEDPD+L++K G EAF R+ A Sbjct: 303 LLFDGDNAGRKATVRAMELCLE---QALPVYVINLPQGEDPDSLLQKHGVEAFNQRVAAA 359 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 P + L+ + + D R RL +P ++ R ++E+ LG+ + Sbjct: 360 KPAFEQFLHWLLAKTPADSIDQRVRLMDEIIPRFQRIKDPVERDLYQKEICRLLGVDLQA 419 Query: 426 QLERLM-------PKAAESGVSRPVPQ--LKRTTMRILIGLLVQNPELATLVPPLENLDE 476 RL P A ++PV Q + +T ++GLL PE + L+ Sbjct: 420 FRRRLAGQRDQQQPVAQRQTATKPVTQTIARDSTQETMLGLLAAYPEARLEIRTLDLQQL 479 Query: 477 NKLPGLGLFRELVNTCL-SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 L L + ++ G ++L + +L + D Sbjct: 480 FDQQHLPLAQAILAAGEGEHDGPLWPEVLARLEQEQQKELVARLLIQDQHLAGIDWRAAL 539 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 L +++ R T E+ E L + Sbjct: 540 RQCLKR-QKQGETRGLKQIALRLATL---PEDSEEYQELLK 576 >UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE Length = 595 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 163/583 (27%), Positives = 285/583 (48%), Gaps = 18/583 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +I ++ + TDIV L++ +L+K+G N+ CCPFHNEKTPSF V +K+ Y+CFG Sbjct: 3 KISSKTVDAVTEMTDIVSLVENYTRLEKRGANWWGCCPFHNEKTPSFNVVPDKKMYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G I+FLM +KL F+E VE LA +EV +E GS + + L D + Sbjct: 63 CHKGGGTINFLMEMEKLSFMEAVERLAKNAGIEVIYEGGSYVPDEGAKIKDQILDLYDKV 122 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + L Q P A YL R +S E+I +F +G++P + ++ L Sbjct: 123 AGSFHFLLTQNPTGKKALDYLLSRNVSPEIIEKFNLGYSPKDRKWLHSFLLSKNYSQDFL 182 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 G+ N + ++ F +R+MFPI D+ G+ I FGGR+L D KYLNS + + KG Sbjct: 183 EKTGLFSKNYKKMAF--FSDRLMFPICDRHGKTIAFGGRILEGDGAKYLNSSDMPQYKKG 240 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++ + A + + +++ EGYMDV+A Q GI AVA LGT+ T D ++LL Sbjct: 241 ETVFAFHHALAEIRKSKSVILCEGYMDVLAFFQAGIENAVAPLGTALTEDQVKLLKSFAE 300 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +D D+AG++A+++A++ + G +R +++ DG+DP +++K+GKE + + Sbjct: 301 TFYLAFDSDKAGQEASYKAIKIC---RSMGVNVRVLYIKDGKDPSEILQKKGKEGLKFLL 357 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 E A+ +L + D+S+P+G+A P I + + R +L + G+ Sbjct: 358 ECAIVDDDYLIQIASMRFDISSPEGKASAIAFLFPYIEVLESDIQRESAISKLSSAFGVS 417 Query: 423 DDSQL-------ERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 + ++ + + +PV +R+++ + + L L D Sbjct: 418 QQAIFSDYVNREKKALRHIVDEVKQKPVDIRMNAELRLVLAVTANTDLFSRLRSQLSPDD 477 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 LF ++ C T L+ H G + ++ +N +E+ Sbjct: 478 FEDFYARHLFI-VLEECYRDGAYTYANLM-HRCGEEKLKEIVSQTISKGEFAEN-SEKIV 534 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 D +N + ++L+ +++++I R R L E+ ++ L +EL Sbjct: 535 DDGINFIKQNVLQKQKDKIIGRLR--LLHGEKNIDTVNLTKEL 575 >UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QCP0_9RHIZ Length = 661 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 197/514 (38%), Positives = 276/514 (53%), Gaps = 24/514 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++++ AR + ++ +V LKK G+ + PF EK+PSF VN +K FYHCF Sbjct: 2 RFNPNFLDEIRARLPVSQVVGRKVALKKAGREYRGLSPFKTEKSPSFFVNDQKGFYHCFA 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ FLM + LEF E VE LA + +P + + QR LY+L++ Sbjct: 62 SGEHGDIFTFLMKTEGLEFPEAVERLAQEAGVPMP--KQPERNVADEDQRDRLYRLLEAS 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+++SL+ + AR+Y+EKRGL HE + F +GFAP + G + + Sbjct: 120 AAFFEESLRSGLGAEARRYIEKRGLQHETVRAFRLGFAPNSRTALTAHLKGKGFSLADMA 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 AGML+ YDRFR RVMFPI D +GRVI FGGR L D P KYLNSPET +FHK Sbjct: 180 SAGMLIAGSDIPEPYDRFRNRVMFPILDLKGRVIAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ A+ + NR++VVEGYMDVVALA+ G +VA LGT+ T D ++LL+R Sbjct: 240 GHTLFNAARARSAAHDKNRVIVVEGYMDVVALAEGGFAESVAPLGTALTEDQVKLLWRFA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 C+DGD AGR AA RA+E ALP++ G L F FLPDG DPD L+R++G A Sbjct: 300 PEPTLCFDGDSAGRKAADRAVEVALPWLKPGHSLGFAFLPDGLDPDDLIRQQGAAAMSDA 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +A PL L++ + TP+ RA L L+ + T+R + ++EL ++L Sbjct: 360 LSKARPLVDVLWDRELRAAPSDTPEQRAALEARLFALVGTIQDATVRSHYQRELRDRLYQ 419 Query: 422 LDDSQLERLMP---------KAAESGVSRPV--PQLKRTTMRILIGLLVQN------PEL 464 L ++ R M A++ +RPV P K L G + PEL Sbjct: 420 LGRNRFPRPMAGLPTGRQGGGIAQASYARPVAAPDWKARDRARLNGPERRFTKKNNAPEL 479 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGL 498 P L ++ LP L ++ T L+ P L Sbjct: 480 VNASPELAGHMQSVLPREAL---IMKTLLNHPWL 510 >UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 Length = 604 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 168/577 (29%), Positives = 266/577 (46%), Gaps = 25/577 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I ++ DIVD+I V+LKKQGKNF CPFH EKTPSF+V+ +KQ YHCFG Sbjct: 6 RVSEDIIEEIRKSIDIVDIISEYVQLKKQGKNFIGLCPFHGEKTPSFSVSPDKQLYHCFG 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN F+M + L F+E+V+++A N+ +P + T Sbjct: 66 CGAGGNVFSFIMETEGLPFLESVKKIADRMNMAIPELEHVTDEATSKEDSITKIWHNAHA 125 Query: 124 --NTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + L AR YL RG + EVI F IG+AP WD + Sbjct: 126 LSAKLFHHVLTSTDEGKEARDYLRNRGFTKEVIDTFQIGYAPNSWDFLASFLEKRKFPMD 185 Query: 181 SLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 ++ G+L + + YDRFR+R++FPI + +G +I FGGR+L PKYLNSPE+ IF Sbjct: 186 EMVKCGILSVREFDQKPYDRFRDRIIFPIWNNKGDMIAFGGRILSEGNPKYLNSPESSIF 245 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K LY ++A+ + N ++ EGY+DV++ + G++ VASLGT+ + ++L R Sbjct: 246 NKSETLYYFHKARPSIRKKNEAILFEGYVDVISAWKAGVDNGVASLGTALSTTQAKMLRR 305 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T++VI CYD D AG++A + A G Q+R LPDG DPD ++K G + F Sbjct: 306 LTDHVILCYDSDNAGQNATMK---NAAILSEAGLQVRVAILPDGMDPDDYIQKMGVDRFN 362 Query: 360 A-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + Q++ L F F +L R + +S++ R + + L + Sbjct: 363 KDVIGQSLTLMGFKFQYYRRGKNLKDDGERMTYIHQMIEEVSKLSHAVERDHYLRRLSEE 422 Query: 419 LGILDDSQLERLM------------PKAAESGVSRPVPQL---KRTTMRILIGLLVQNPE 463 + ++ ++ + K S S+ +L RILI +++N Sbjct: 423 FSLSLEALKQQQIQVYKQSKGKNEERKVVHSNFSKQQKRLLLAYENAERILIAHMLKNNS 482 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 +A V N + L + +E+ +L+M Sbjct: 483 VANQVQRKVGGAFNIDEYQAIAAHLFSYYADGFEPNPSSFIEYLEDDKLKRITSELAMM- 541 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT 560 + ++EQ D + + + L E+L + Sbjct: 542 -TITEEMSEQELADYIKQIKNYPKRLEVEKLKVERKK 577 >UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 Length = 643 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 202/590 (34%), Positives = 296/590 (50%), Gaps = 28/590 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P F++++ R + +++ RVKLKKQG+ F PF+ EKTPSF VN +K FYHCF Sbjct: 2 RFPPSFLDEIRTRLPVSEVVGRRVKLKKQGREFAGLSPFNAEKTPSFFVNDQKGFYHCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ DFLM + L F E VE LA+M L +P + + + +R+TL+++M+ Sbjct: 62 SGKHGDVFDFLMETEGLPFGEAVERLASMAGLPLP--DVTPEAAAKEARRRTLHEVMEMA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F++ LQ AR YL RGL RF +G+AP + + G ++ Sbjct: 120 AAFFEAELQARAGAKARGYLSDRGLGPSTQKRFRLGYAPGDRFALKEALGKAGVPVSDMV 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 + G+L+ D YDRFR+RVMFPI D +GRV+ FGGR L D P KYLNSPET +FHK Sbjct: 180 ETGLLIAGDDIPVPYDRFRDRVMFPITDLKGRVVAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY Y A+ + ++ VEGY+DV+AL + G AVA LGT+ T + +QLL+R Sbjct: 240 GSLLYNAYSARAAVQKGAPVIAVEGYVDVIALVEAGFEGAVAPLGTALTEEQLQLLWRMA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + + +DGD+AGR AA+RA+ ALP++ G+ L F LPDG+DPD L+R G+EA E Sbjct: 300 DEPVLLFDGDKAGRRAAFRAVGLALPHIKPGKSLSFGALPDGQDPDDLIRASGREAMEGV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + QA PLSA L+ +L TP+ RA L ++ + E +R + +Q+L ++L Sbjct: 360 LAQAQPLSAMLWARETEGSNLETPERRAALEARIGEAVAAIQDENVRRHYKQDLQDRL-- 417 Query: 422 LDDSQLERLMPKAAESGVSR-----PVPQLKRTTMRILIGLLVQNPELATLVP-PLENLD 475 RL+ +E+ R + R G ++ P L + Sbjct: 418 ------RRLLSPGSENRPRRFEGGWSAAPGRSGNFRPQNGRFMREPPLVPGTELARSAVV 471 Query: 476 ENKLPGLGLFRELVNTCL-SQPGLTTGQLLEHYRGTNNAA----TLEKLSMWDDIADKNI 530 L L L+ CL + P L + E G A L + + + + Sbjct: 472 RGPLASLPRNEALLLFCLINHPWL-MDEYAEEVAGLPFANKDADRLRRALLEAHLEGAHE 530 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARER---THGLSNEERLELWTLNQE 577 E T+ L L R + + + E LW L + Sbjct: 531 GEA-LTEHLTREDLDALAQRVRAFANPKMDWPAYPDTAPEDARLWWLQRA 579 >UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9SPHN Length = 617 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 197/607 (32%), Positives = 297/607 (48%), Gaps = 45/607 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA I + ++L AR + +I KL + G+ + ACCPFH+EK+PSF VN +K FYH Sbjct: 1 MA--ITPQWKDELRARITLSSVIMRTTKLTRAGREWKACCPFHDEKSPSFYVNDQKSFYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I ++ L F++ +ELA+ +EVP A + +R L + Sbjct: 59 CFGCGAHGDVISWMTEQRGLSFIDACKELASEAGMEVP--APDPVAAKRAEKRAELVDVT 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ Q+L++ V A YL+KRGL E + F G+AP + Q Sbjct: 117 TEAQEWFVQNLREEVGREALDYLKKRGLKPETLREFGFGYAPESKQALPNALPR--FEDQ 174 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDI 238 L++ GM + D G +YDRFR RVM PI+D RGRVI FGGR+LG KYLNSP+T + Sbjct: 175 MLVETGMRIRTDDGTTYDRFRGRVMLPIQDTRGRVIAFGGRILGKREGVAKYLNSPDTPL 234 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR LY ++ A + + R++VVEGYMDVVALAQ G AVA +GT+ T +++L+ Sbjct: 235 FDKGRNLYNIHRAAPASRQSGRVIVVEGYMDVVALAQAGFEDAVAPMGTALTEMQLEMLW 294 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + C+DGD AG+ AA RA+ ALP + R L + LP G DPD L+ ++G A Sbjct: 295 RMVEVPVLCFDGDAAGQKAAMRAIGRALPLLAPMRSLGIVTLPTGLDPDDLINEQGPGAM 354 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E + Q M L FL+ + L++P+ +A L + + + ++ R+EL ++ Sbjct: 355 EKLLAQPMSLLDFLWQAERDAQPLASPEAKAGLKARLMAHVDTIEDRDIQALYRRELLDR 414 Query: 419 LGIL-----DDSQLERLMPKAAESGVSRPVPQLKRTTMR-------------ILIGLLVQ 460 + Q ++ + V + + R+T++ +I L++ Sbjct: 415 FSAFAFPPREPRQRQQKGAWQSFKAVPKGLSPEARSTLQRAMGGGQRAGFQSAVIAGLIR 474 Query: 461 NPELATL----VPPLENLDENKLPGLGLFRELVNTCLS-----------QPGLTTGQLLE 505 PE + L LD + P + EL T S P Q Sbjct: 475 FPEEIERHSEALTRLARLDPDAAPAIESLIELSETLDSQAPSAISDRQGHPAPPEDQRFA 534 Query: 506 HYR-GTNNAATLEKLSMWDDIADKNIA-EQTFTDSLNHMFDSLLELRQEELIARERTHGL 563 R GT E+L+ + + A E ++ + E+ AR R Sbjct: 535 FLRKGTPPGEAREELAEAVSLLAQKPALEAAMAATIARFDEDPEGSFAEQ--ARLREQLT 592 Query: 564 SNEERLE 570 + EERL+ Sbjct: 593 TVEERLK 599 >UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4_KOCRD Length = 668 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 159/448 (35%), Positives = 241/448 (53%), Gaps = 14/448 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I+++ ARTDI ++++ V LK G ++ CPFH+E++PSF V + Y Sbjct: 1 MAGLIKREDIDEVRARTDIREVVEQYVTLKPAGIGSYKGLCPFHDERSPSFHVRPQMGTY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I FLM D F ETVE LAA E+ +E G P++ E +RQ L Sbjct: 61 HCFGCDESGDVIAFLMEMDHTPFTETVERLAARIGYELHYEQGGAPNREEVGRRQRLLDA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+Q++L A +A+++L +RG + + +G+AP GW ++L Sbjct: 121 HKVAAEFFQRNLYTRQAAAAQKFLGERGFDQDAARTYGVGYAPQGWSHLLNHLRNQGFTE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q L GM ++G YDRFR R+++PIR G VIGFG R L + PKYLN+PET Sbjct: 181 QELKLTGMFSEGNRG-LYDRFRGRLIWPIRAVAGEVIGFGARKLYEDDQGPKYLNTPETQ 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + LYG+ A++ A+ +++VVEGY DV+A G+ AVA+ GT+ +HI+++ Sbjct: 240 LYKKSQVLYGIDLAKRPIAKTKQVVVVEGYTDVMACHLAGVATAVATCGTAFGPEHIKIV 299 Query: 298 FRA------TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R V+ +DGD AG+ AA RA + ++ Q P+G DP L Sbjct: 300 RRFLSDDSAGGEVVFTFDGDAAGQKAALRAFQEDQRFVA---QTYVAVEPNGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G A +E PL F + + + D+++ +GR R P+++Q+ +LR Sbjct: 357 ARGDVAVRDLVETRTPLFEFALRATIKEYDVNSLEGRLRAMRACAPIVAQIRDSSLRPAY 416 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGV 439 +EL LGI D + R + AA+S Sbjct: 417 ARELSGWLGIETDEVM-RAVSAAAKSAQ 443 >UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZN8_9RHOB Length = 652 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 194/632 (30%), Positives = 303/632 (47%), Gaps = 62/632 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++F++D+ R + D++ RV ++ GK ++ ACCPFH+EK+PSF V+ + Sbjct: 2 RFDQLFLDDIRNRVSLTDVVGRRVTWDRRKSQPGKGDYWACCPFHSEKSPSFHVDERRNR 61 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCG G+ FLM + L F E VEELA + + +P A + +R TL Sbjct: 62 YKCFGCGESGDHFKFLMETEGLSFPEAVEELAGLAGIAMP--APDPQAAKRAAKRNTLTD 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + +Y+ Q +A++Y+++RGLS E + F GFAPPG DN+ K + Sbjct: 120 VCEMAARYYRHMFQSVEGRAAQEYVQRRGLSAETLNEFQFGFAPPGRDNLKKALMAKDIS 179 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPET 236 LI+ G+L+ D GR YDRFR R+M PI D RGR + FGGR + + PKYLNSPET Sbjct: 180 EAELIEVGLLIKPDDGRPSYDRFRNRLMIPIHDDRGRAVAFGGRTMDPDGQPKYLNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A+Q E + +VVEGYMD +AL Q G+ VASLGT+ T D I Sbjct: 240 PLFHKGTMLFNAHRARQPAYEAGQAIVVEGYMDAIALWQAGMKGTVASLGTAFTEDQIMR 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L++ + + C+DGD AG AA RA++ LP +T G+ +F FLPDG+DPD ++ G Sbjct: 300 LWKFADEPVICFDGDVAGISAAHRAVDRILPVLTSGKSFQFAFLPDGQDPDDVINAGGTS 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 A +E+A+PLS ++ + TP+ +A L L+ + E ++ R +L Sbjct: 360 AMYGELEKALPLSEVVWQRESEHARIDTPERKAALEKAVEDLVGTIKDERVQKRYRMDLR 419 Query: 417 NKLGIL--DDSQLERLMPKAAESGVSRPVPQLKRTT--------------MRILIGLLVQ 460 KL L ++S+ R + G P R + R + + Sbjct: 420 LKLSNLFYEESRRNRGQGGGRDGGWRGPQGGNDRASLAKVEAPDTPAYGVERSFCTMCLM 479 Query: 461 NPEL----------------------ATLVPPLENLDENKLPGL---------GLFRELV 489 PEL A LV +L E + + + +E + Sbjct: 480 YPELFERHFERISQLTYSNELHSMFMAALVRIATDLAEGAVTQIYNKLDERFYQILQEAI 539 Query: 490 NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 + + + L + N +L + + ++ E F + M + + Sbjct: 540 VSSSGEEDGSKSSTLRRWDALTN-----RLQILKNDPPEDFVEMLFLN-YADMLELRMLE 593 Query: 550 RQEELIARERTHGLSNEERLELWTLNQELAKK 581 + E R L+ E L Q+L+++ Sbjct: 594 LELEHETRAMEQDLTEESWSRFQALQQDLSRR 625 >UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WEJ5_ZYMMN Length = 628 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 204/585 (34%), Positives = 297/585 (50%), Gaps = 26/585 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+++L R + LI VKL + G+ F ACCPFHNEKTPSF VN EK FYHCFGC Sbjct: 7 LPPEFLDELRQRITLSSLIGRTVKLTRAGREFRACCPFHNEKTPSFYVNDEKGFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI F+ L F++ V ELA +++P + Q +R TL+ +M Sbjct: 67 GAHGDAIRFVTETRGLSFMDAVRELAGQAGMDIPEANPAAVRQAKRT--ATLHDIMAEAA 124 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ + L R+YL+ RG+S + F +GFAP G + + LI+ Sbjct: 125 KWFSEQLHGIEGAEVRRYLDNRGISPAIAQNFGLGFAPNGRGRLKNALS--HHAVEKLIE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG---------NDTPKYLNSPE 235 G+L++ + YDRFR R+M PI+D+RGRVI FGGR L +++PKYLNSPE Sbjct: 183 VGLLISVEGRDPYDRFRGRLMIPIKDQRGRVIAFGGRRLESIEGGNSLPDNSPKYLNSPE 242 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F KGR LY + +A Q NR++VVEGY+DV+ LAQ GI+ AVA LGT+ T I+ Sbjct: 243 TPLFDKGRTLYNIDKASQAARRQNRIIVVEGYLDVIGLAQAGIHEAVAPLGTALTEHQIE 302 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L+R + I C+DGD AG+ AA RA E AL G+ L F+ LP+G+DPD LV+++GK Sbjct: 303 RLWRIEDKPILCFDGDSAGQKAAVRAAERALVQARPGKTLSFVTLPNGKDPDDLVKEQGK 362 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE----TLRIYL 411 AFE + + + L L+ Q+D +P+GRA LS L + E R Sbjct: 363 SAFEEVLSRPIALDRLLYRFEASQIDPQSPEGRAALSKRLDELAASCRDEFIARGYRSNF 422 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVS----RPVPQLK-RTTMRILIGLLVQNPELAT 466 + G Q + AA +S + L+ + + +ILIGL + + Sbjct: 423 KNLFYENFGWKSKKQQDSQTTIAATVTLSDLSTPTISDLECQYSRQILIGLSLYPEAIKQ 482 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 + L L L+ +S+P L + + N D Sbjct: 483 RLERLAELAVTDPKLKKWRETLITAVISEPDLDRDTIKAILKADANVDIDTWDIKKDLRF 542 Query: 527 D---KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER 568 +IA +SL + D ++E R+ ++ + EER Sbjct: 543 PFTRPDIAPDLAIESLVALIDLVVEERELATEEQQLKQVFT-EER 586 >UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8_DELAS Length = 677 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 195/442 (44%), Positives = 282/442 (63%), Gaps = 9/442 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI +LL+R D+VD++ V+L+K G NF CPFH+EK+PSFTV+ KQFYHCFGC Sbjct: 12 IPQSFIQELLSRVDVVDIVGRYVQLRKGGANFMGLCPFHSEKSPSFTVSPSKQFYHCFGC 71 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQ----IERHQRQTLYQLM 120 G +GNAI FLM++ + FVE V++LA+ L+VP + S + ++ ++ TL ++ Sbjct: 72 GKNGNAIGFLMDHAGMGFVEAVQDLASQVGLQVPQDDISPAERERQAAQKQKQATLTDVL 131 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + Y++ L+ + A YL++RG+S E RF +G+AP GW ++ F + Sbjct: 132 EKAGDAYRKHLK--ASPQAIDYLKRRGVSGETAKRFGLGYAPAGWRSLASVFPQ--YDDP 187 Query: 181 SLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L ++G+++ + + YDRFR+R+MFPIR+ +G IGFGGRV G++ PKYLNSPET +F Sbjct: 188 QLEESGLVIVGEGDDKRYDRFRDRLMFPIRNVKGECIGFGGRVFGDEKPKYLNSPETPVF 247 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGL+EA+ + LV EGYMDVVALAQ G AVA+LGT+ T DHI LFR Sbjct: 248 HKGRELYGLFEARTALRDMGYALVTEGYMDVVALAQLGFANAVATLGTACTPDHIHKLFR 307 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T V+ +DGD AGR AA +AL+ ALPY +D R ++F+FLP DPD+ +R+ G EAF Sbjct: 308 FTEAVVFSFDGDAAGRRAARKALDAALPYASDTRSVKFLFLPAEHDPDSFIREYGSEAFA 367 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A+PLS FL + DL +GRA +++ A PL + +P L+ L E+ + Sbjct: 368 RYVGDALPLSRFLIEAASEGCDLGQAEGRAHMASNARPLWTALPDGALKRQLLGEIAELV 427 Query: 420 GILDDSQLERLMPKAAESGVSR 441 + + +AA SG +R Sbjct: 428 QLDARDLSDLWSQEAARSGPAR 449 >UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446E1 Length = 613 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 182/596 (30%), Positives = 281/596 (47%), Gaps = 40/596 (6%) Query: 13 LLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAID 72 +LA TDIVDL+ VKL++ G N+ CPFH EKTPSF VN + YHCFGCG G AI Sbjct: 1 MLAATDIVDLVGRYVKLRRVGTNWRGLCPFHGEKTPSFYVNPARGSYHCFGCGVGGTAIR 60 Query: 73 FLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSL- 131 F+M +D L+F++ V+ LA + + E ++ R L +L ++ ++ L Sbjct: 61 FVMEHDGLQFMDAVKRLADSAGIRIQEEVWDANAERTAKIRNGLVKLHRDISAWFHLLLM 120 Query: 132 QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 + VA AR YL+ RG++ + +G+AP ++K + L+ G+L Sbjct: 121 KGQVAEEARAYLKSRGINAATAKSWEMGYAPASTPMLMKWAEEHKYTENLLVAGGILARG 180 Query: 192 DQ-----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQ 244 D+ G+ Y RFR R+MFPIR+ G VI F GR+L ++ KYLNSPET +F+K + Sbjct: 181 DEDSGRGGQIYARFRHRLMFPIRNDYGEVIAFSGRLLDSNAKAAKYLNSPETMLFNKSKV 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+GL ++++ + NR +V EG +D++ + G VA LGT+ T H ++L R V Sbjct: 241 LFGLDKSKRAIIKANRAVVCEGQIDMIMAFESGFENVVAPLGTAFTEFHARMLKRHAEEV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + C+D D AG AA RA P G ++ LP GEDPD+L+RKEG +AF+A+++ Sbjct: 301 VLCFDSDNAGYKAAERAFHILAPT---GLVVKVAPLPQGEDPDSLIRKEGPQAFQAKLDD 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD- 423 A + + +++ + R + +I + R Q++ +L IL+ Sbjct: 358 ARDFFDHMIDYASSTRNMAETREKTRFAGDMATMIQLLDNNIARDAAIQKVCVRLNILES 417 Query: 424 --DSQLERLMPKAAESGVS---------------------RPVPQLKRTT---MRILIGL 457 Q+ RL A RP R +I L Sbjct: 418 DFRKQVARLAKSIANQQQKAAAGKNGGNGASGSGASGATDRPEEAELPPPHPHARQMIRL 477 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 V + E+ L+ LD ELV SQ L+T L + T A Sbjct: 478 AVTSAEVLALIRTHAQLDALAAVPGCELLELVF--KSQSDLSTSGGLSAFLTTLTPAEER 535 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 S + ++ +T +L H+ LE + + R R GL+ +E + L Sbjct: 536 AFSRVVAEPPQRVSIETALQTLQHIEFQGLENLYQNVTTRLRQPGLAKDEVILLQQ 591 >UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID=C9R940_AMMDK Length = 611 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 189/595 (31%), Positives = 291/595 (48%), Gaps = 28/595 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G +P F+ ++L RTDIV L+ V+LK+QGKN+ CPFH E+TPSFTV+ EKQF++ Sbjct: 1 MRGYVPPEFVKEVLDRTDIVALVGEYVRLKRQGKNYVGLCPFHAERTPSFTVSPEKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+A+ FLM +KL+F+E +E LA L +P ++ R + + +L Sbjct: 61 CFGCGVGGDALKFLMLQEKLDFLEALERLALRAGLSLPSQSRDPAWLARRRELEEGEELN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ SL AR+YLE+RG+S E+ RF++G+APP + +L+ ++ Sbjct: 121 RLSLEFFTASLWGERGEPARRYLEERGVSEEIARRFSLGYAPPEEEALLRYLRARGITKE 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIF 239 + + G+ GR DRFR R++FPI D +G+V+GFGGR L PKYLNSPET +F Sbjct: 181 AAVKWGLASRTSAGRVVDRFRGRLIFPIFDPQGKVVGFGGRALVSYLQPKYLNSPETPLF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K +LYGLY+A+ ++VEGY+D + L Q+G YAVASLGTS T + ++LL R Sbjct: 241 NKRNELYGLYQAKDAIRAAGFAVLVEGYLDAITLHQFGFGYAVASLGTSLTQEQVRLLSR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T V YD D AG A WR L+ G ++ + LP G+DPD +R G A+E Sbjct: 301 YTGKVYIAYDSDTAGEAATWRGLDIL---AGAGLEVLVVELPQGKDPDEFLRALGPAAWE 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A + A+PL + LM L T + + LP ++ + R + + Sbjct: 358 ASLASALPLLEYKGKKLMAG-GLVTARDKLKALRALLPNLACLRTLPEREEGIRLVSRIT 416 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKR--------------TTMRILIGLLVQNPE-L 464 G+ + + L+ E V+ + K R L+ L PE L Sbjct: 417 GLSWEVVRDELLRFTGEEEVTTRLKSDKSAKNKHEALESRACFAAERGLLQALFCRPEIL 476 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDD 524 A + P ++ L + ++ L A L ++ Sbjct: 477 AEVEEAGGEELFTHPPCRAVYSALKEALAAGEDISPTHLASRLPEEALDAAAGILVGEEE 536 Query: 525 IADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + D L + +L+ ++++L + +E E+ +EL Sbjct: 537 SPP-------WKDCLRFLRMNLVRQKRKQLAGKLSLAEARGDE-EEVRRCLEELQ 583 >UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW37_9RHOB Length = 648 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 186/621 (29%), Positives = 295/621 (47%), Gaps = 46/621 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++++ AR + D++ RV ++ GK ++ ACCPFH EK+PSF V+ + Sbjct: 2 RFEPRLLDEIRARLTLSDVVGRRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNR 61 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCGA G+ FL + L F E VE LA + +P A + +R L Sbjct: 62 YKCFGCGASGDHFTFLCETEGLSFPEAVERLAEQAGVGLP--APDPQAARREKKRAGLAD 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + F+Q P +AR Y +KRGL+ E + F GFAP D + Sbjct: 120 ICEMAAQFFQAEFAGPRGDAARAYTQKRGLAQETLREFRFGFAPDSRDALKGYLAAREIP 179 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPET 236 ++I+AG+++ + GR YDRFR R+M PI D RGRV+ FGGR L + PKYLNSPET Sbjct: 180 EAAMIEAGLIIKPEDGRPSYDRFRGRLMIPIHDDRGRVVAFGGRTLSPDGQPKYLNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A++ + +VVEGY+D +AL Q GI++ VASLGT+ T D + Sbjct: 240 PLFHKGVMLFNAHRAREPAFKSGEAVVVEGYLDAIALWQAGIHHVVASLGTAFTEDQVVR 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L++ + C+DGD AG AA RA++ P + G +F FLPDG DPD L+++ G Sbjct: 300 LWKFAPEPVICFDGDAAGVSAAHRAIDRIFPVLKSGYSFQFCFLPDGMDPDDLIKQRGVT 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F +E+A L +++ + L TP+ +A L LI + E +R + +L Sbjct: 360 GFHDEVERAQSLFEVVWDREISVSRLDTPERKAALEKRFDDLIGTIRDERVRRRYQLDLK 419 Query: 417 NKLGILDDSQLER--------LMPKAAESGVSRPVPQLKRT------TMRILIGLLVQNP 462 KL L Q + AAE+GV + + + + T R+++GL ++ P Sbjct: 420 FKLSNLFFEQARQSRQGGKGGRSGGAAEAGVPLGMARERVSATHDFGTERLVLGLSMRFP 479 Query: 463 EL----ATLVPPLENLDENKLPGLGLFRELVNTCLSQP-------------GLTTGQLLE 505 L L ++ + +V+ + P + +LE Sbjct: 480 YLLDRNFERFSRLPFANDLHRELRDILCRIVDDLEATPIAELTSAFEEPLRDIMGEMMLE 539 Query: 506 -----HYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT 560 RG +A + + ++ E + L+ + + LE +A Sbjct: 540 TIGMQQQRGAEFSALTHRFPLLKSNPPEDFIEAAYLHFLDVLELNALEDELSSELATADE 599 Query: 561 HGLSNEERLELWTLNQELAKK 581 L + + L Q+L+++ Sbjct: 600 Q-LDEHSWMRIQALTQDLSRR 619 >UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID=B9KY77_THERP Length = 616 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 177/598 (29%), Positives = 283/598 (47%), Gaps = 39/598 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R + + DIVDLI ++L+K GKNF A CPFH EKTPSF V E Q ++CFGCGA Sbjct: 3 RQDVERVREAIDIVDLIGGYIQLRKAGKNFKALCPFHQEKTPSFYVFPETQSFYCFGCGA 62 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+AI FLM ++L+F + +E LA + + E QR+ L +L + Sbjct: 63 SGDAISFLMRIEQLDFRDALERLAERAGIT--LSPPRPEERAEDEQRRRLAELNRLAAAW 120 Query: 127 YQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L +AR YLE+RG+ RF +G+AP + + + + L+ A Sbjct: 121 FAHVLWGTSFGEAARSYLERRGIDRPTAERFGLGYAPDAPSALARYLSQHGAGPEELVTA 180 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++V D G DRFR R++FPIRD+ G ++GFGGR LG PKYLNSP+T +F KG L Sbjct: 181 GLVVRRDDGSLVDRFRNRLIFPIRDRHGTILGFGGRTLGEAQPKYLNSPQTPLFDKGSVL 240 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 Y + A++ + +VVEGY+D + Q+G + VASLGT+ T + L R ++ Sbjct: 241 YAIDLAEESIRQQRTAIVVEGYLDAITAHQFGYSNTVASLGTALTERQGRHLRRLAERIL 300 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDG------------------RQLRFMFLPDGEDPD 347 D D AGR A R LE + +G +L + LP+G DPD Sbjct: 301 LALDADVAGRQATLRGLELLRHALAEGERAVVDPRQLIRFERTLDVELAVVVLPEGLDPD 360 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 L+R++ + ++ + A+PL + + L+ + + P L PL+ ++ Sbjct: 361 DLIRQD-RTRWDEALAHAVPLVDYYLDVLLGEQPPANPRAATALLQRIAPLLLELGDLVQ 419 Query: 408 RIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK-------RTTMRILIGLLVQ 460 + + +L + +++ + RL+ P P+ +T + +GLL++ Sbjct: 420 VDLYTRSVAARLRLPEET-VRRLLASLRRQPTREPSPKTTAAAILRPLSTEQQFVGLLLR 478 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 PE A + +L+ +RELV+ L+ L L E R ++ + Sbjct: 479 YPEAAAHLVGEIDLESITD---ARYRELVSLLLAGQPLDDAALAEDLRDD-IGQLRQRFA 534 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 D+ +A Q ++ + + R L++ R EER + L + L Sbjct: 535 TQPDL-PVPLARQAIREAFRRLRRERHDERLRSLLSEVR----DAEERGDRDELRRAL 587 >UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRS5_9GAMM Length = 586 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 207/589 (35%), Positives = 306/589 (51%), Gaps = 20/589 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R + FI+ +LAR+DI+ LID+RV LKK+GK++ +CCPFH EK+PSF+V+ EKQ Y+CFG Sbjct: 3 RFSQAFIDTVLARSDILRLIDSRVSLKKKGKDYWSCCPFHQEKSPSFSVSPEKQIYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C AHGNAI FLM Y++L FVE V LA + +P E + E + + +++ Sbjct: 63 CHAHGNAIGFLMAYERLSFVEAVSLLAEEAGIPLPQEG-----RPEGPDPRPVRAILEAA 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 Y+++L A+ Y +RGLS F +GFAP + R G N R+ L+ Sbjct: 118 EKLYREALHSH--PPAQAYWRQRGLSEATWNHFGLGFAPDQAQFLTSRLGQNSAQRELLV 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG++ D GR YDRFR RV+FP+RD RG++ GF GR PKYLNSPET ++HKG+ Sbjct: 176 AAGLVSRRDDGRYYDRFRARVIFPLRDGRGQLCGFAGRSTDGREPKYLNSPETILYHKGQ 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A++ R+++VEGY+DV+ L Q G+++AVA+ GT+ T +++L+R Sbjct: 236 MLYGLDLAREGIRRRRRVVLVEGYLDVITLHQAGLDFAVAASGTALTDKQLEILWRTAGE 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRAL+ A + GR LR +FLP+GEDPD+LVRK G AFE + Sbjct: 296 IVLCFDGDAAGRAAAWRALQLAPARLRPGRLLRVLFLPEGEDPDSLVRKGGAAAFEEILA 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA P + L + DL D +A+ A ++QV LR Q L G+ Sbjct: 356 QARPALDHHLSVLRERYDLKKADEKAQFLGEARAFLAQVQDADLRAVYGQRLEEIAGVA- 414 Query: 424 DSQLERLMPKAAESGVSRPVP-----QLKRTTMRILIGLLVQN---PELATLVPPLENLD 475 L + +A +PVP + + + + LL+Q P L L Sbjct: 415 -VVLPKTSAQAFPESAPKPVPVKAKRPGRPSLCQAALRLLLQRPVDPHWQQLERRLLVYL 473 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 ++ + + + + + L + L + + ++ Sbjct: 474 RDEDTHAEVLADGLEILSESTHIGSQALFARLAARWDLDALFREQFAPSVGSDEGSQSEV 533 Query: 536 TDSLNHMFDSLLELRQE---ELIARERTHGLSNEERLELWTLNQELAKK 581 D + + L + R R LS EER EL + + K Sbjct: 534 RDCVARLNLQLTQARIRFIGRTADRAGLAALSPEERQELLRITKGRRSK 582 >UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW9_ELUMP Length = 578 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 177/565 (31%), Positives = 265/565 (46%), Gaps = 16/565 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVK-LKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + I ++ R DIV+L+ V LK+ GK + CCPFHNEKTPSFTV+ ++ ++CFG Sbjct: 1 MSDKIIEEIRDRVDIVELVREYVPSLKRAGKTYKGCCPFHNEKTPSFTVSQDRGLFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G+ FLM + L F E ++LA LE E R +L+D Sbjct: 61 CQTGGDVFAFLMKTENLSFSEAAKKLAERAGLE---WKKEEVLTQEEKNRLEARKLLDFA 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY ++L AR YL+KR L+ E + +F IGF P G D + K N N L Sbjct: 118 KVFYNKTLLSSQGNEARGYLKKRSLTKETVEKFEIGFTPQGVDALSKAALANGYNANLLR 177 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+ G D FR R+MFPI + RG +GFGGR+ G PKYLNSPET +F K R Sbjct: 178 SAGLAAQGQYG-VRDYFRSRIMFPIINHRGETVGFGGRIFGEGEPKYLNSPETILFSKSR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A + + N +++EGYMDV+ + Q GI VA LGTS +H +LL R + N Sbjct: 237 VLYGLNFAGPEIRKANYSILLEGYMDVIGVMQSGIGNCVAPLGTSFNEEHAKLLKRYSEN 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFL-PDGEDPDTLVRKEGKEAFEARM 362 + +D D AG A+ R TAL + G ++ L +G DPD + K GKE FE + Sbjct: 297 AVILFDPDAAGIKASLR---TALILIQQGLFVKVATLGEEGLDPDEFINKYGKEKFENIL 353 Query: 363 EQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 A+ + F + L+ Q + TP + +++ + ++S P ++ + + KL + Sbjct: 354 ADAVDIIDFQADVLIKQHGGNLTPQNKTQIAAQLMEIVSVQPDPIVKSEWIKIVSEKLSV 413 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRT----TMRILIGLLVQNPELATLVPPLENLDEN 477 ++ L + P PQ+K+T L+ L+++P T L+ Sbjct: 414 -EEHLLTPKKTAVNTRRNTPPAPQVKKTNIPVEEEDLVAWLLKSPAHITQAQELDESKFT 472 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 + + P + + + + K+SM D N A D Sbjct: 473 SRACYEIISTMDEILKQTPSTENIAPMLIKKLPQHENFILKISMAATPKDFNPARD-IRD 531 Query: 538 SLNHMFDSLLELRQEELIARERTHG 562 + + L + L A + G Sbjct: 532 CAAKIERNYLSKKLAALKAEIKKMG 556 >UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHB3_RHOM4 Length = 619 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 182/608 (29%), Positives = 282/608 (46%), Gaps = 47/608 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I + DIV+++ V L+++G N+ CPFH EKTPSF+VN + CFG Sbjct: 2 RIPEETIEAIRTAVDIVEVVGEYVSLRRRGANWFGLCPFHEEKTPSFSVNPHLGIFKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+ F+ + + FVE V LA + +P + R LY + Sbjct: 62 CGRGGDVFAFIQQIEHVSFVEAVRMLAERAGIPLP-----DGEEEADDPRPALYHALRFA 116 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY + L Q AR YL++RG+ E + RF +G+AP WD +LK + L Sbjct: 117 ARFYFEQLTQSEAGQVARAYLKQRGIHPEAVRRFGLGYAPNAWDALLKAATEAGIRPEVL 176 Query: 183 IDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 AG+++ ++G YDRFR R+MFPI GRV+GFGGR+L + PKY+N+PET ++ Sbjct: 177 EQAGLVLPRKERGGYYDRFRHRLMFPIFSHTGRVVGFGGRLLEPDPEQPKYINTPETPVY 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR LYGLY+A+Q ++VEGY DV+AL Q GI + VA+ GT+ T D +LL R Sbjct: 237 HKGRILYGLYQARQALRTQEEAILVEGYTDVIALHQAGIEHVVATSGTALTPDQARLLAR 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ +D D AG+ AA R++E ++ G + + LP GEDPD+ VR +G AF+ Sbjct: 297 YVRRVVLLFDADAAGQQAALRSIEL---FLERGLNVYVVSLPPGEDPDSFVRAKGARAFQ 353 Query: 360 ARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + Q F + Q L TP+G A ++ + I+++P LR + Sbjct: 354 EYLRQRRRDFVTFHYELARRQGRLDTPEGEAEVARTIVSAIARLPDPLLREPYVRRAAEL 413 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLK-----------RTTMRILIGLLVQ--NPELA 465 L I LE L + S P P R+L+ L+++ P +A Sbjct: 414 LRIQQVRLLEILEAQLTPSSREAPPPAPSPSTPPPTSPTWHEAERLLVRLMLEEGRPMVA 473 Query: 466 TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 ++ + + + P L L+ + G + R L ++ + Sbjct: 474 FVLGHMALEEFTEGPPRQLIARLLEQY--EAGAVDARPFLEGRYGPEVQRLTVEALMEPY 531 Query: 526 ADKNIAE--------------QTFTDSLNHMFDSLLELRQEELIARERTHGL-SNEERLE 570 E + D++ + R +E+I R + L + + Sbjct: 532 EPSENWERKGISVPRLRDRAYEAAADAMVRLKLQ----RIDEMIHRLKEEQLRTRHDEAR 587 Query: 571 LWTLNQEL 578 + + L Sbjct: 588 VREIIARL 595 >UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWR2_9BACT Length = 658 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 159/549 (28%), Positives = 247/549 (44%), Gaps = 18/549 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I+ + A +IVD+I V LK++G N+ ACCPFHNEKTPSF V+ K Y CFG Sbjct: 1 MIDRETIDRIYAAANIVDIIGEYVTLKRKGVNYQACCPFHNEKTPSFVVSPSKGVYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNA+ FLM ++ + + E ++ +A + +EV + + R++++ + Sbjct: 61 CGKGGNAVTFLMEHENMTYPEALKAVAKRYGIEVREKEMTPEEVARNDNRESMFVVNSWA 120 Query: 124 NTFYQQSLQQPVAT---SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ L + +KRG S I +F +GF P D + + Sbjct: 121 AEYFSNYLLHETEGMSVGMTYFRQKRGFSDATIKKFGLGFCPARGDRMSWAALAAGYKEE 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 L+ G+ + D G +DRFRERVMFP+ + GRV+ FGGR L KY NSPE++I Sbjct: 181 FLVSTGLSIKRDDGSLFDRFRERVMFPVHNISGRVVAFGGRTLRTDKSVAKYQNSPESEI 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K R+LYGL+ A++ + + ++VEGY DV+++ Q G+ VAS GTS T + I+LL Sbjct: 241 YSKKRELYGLFFAKKAIQQYDFAIMVEGYTDVISMHQAGVENVVASSGTSLTTEQIRLLG 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T N+ YDGD AG A+ R ++ L +G +R + LP +DPD+ R Sbjct: 301 RFTRNITVIYDGDSAGIHASLRGIDMIL---REGMNVRVVLLPPEDDPDSFARTHTAAEV 357 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + F L+ P +A L + I Q+P R +E Sbjct: 358 QEYIRANEEDFLTFKAKLLLKDA-AGDPIKKAALINDMVQSIVQIPDPIQRSVYIKECAR 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQ-LKRTTMRILIGLLVQNPELATLVPPLENLDE 476 + I ++ + + K S R + ++R + R Q PE Sbjct: 417 IMDIDENLLIAEVGRKRMASTGDREAEEFVRRQSARFRAEQTAQRPETV-----FAGQVT 471 Query: 477 NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFT 536 L REL L + + R E + D + F Sbjct: 472 GGSSAEALERELTRYLLKYGHCSFD--FKEGRNVVQYNVAEVIFGELDADGLEFQNRVFN 529 Query: 537 DSLNHMFDS 545 + L + Sbjct: 530 EILRVYREQ 538 >UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9XFW4_9BACT Length = 605 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 164/601 (27%), Positives = 276/601 (45%), Gaps = 32/601 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G + + + +DIVD+I + + LK+ G NF A CPFH EK+PSF VN KQ +H Sbjct: 1 MTGFFSQATREQVRSASDIVDVIGSYLPLKRAGANFVALCPFHKEKSPSFNVNPHKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ F+ Y+ + F + V+ LA + + + Q RH + L Q+ Sbjct: 61 CFGCHKGGDVFTFVKEYENIPFPDAVKRLAERAKIPLEMDNNPAQQQ-SRHLKDVLLQIH 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + +Q +L + AR YL +RG++ E I F +G+AP W++ + + Sbjct: 120 EQITQRWQSALANEAAGQIARDYLVQRGVTEEAIKLFRLGYAPDVWEDTVNWSRSKGFDP 179 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPET 236 + +G+++ + YDRFR R++FPI D++GRVIGF GRVL D KY+NSPET Sbjct: 180 VVMEQSGLILRKEGSDHYYDRFRGRLIFPICDEQGRVIGFSGRVLSGDQKTAKYVNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF KG+ +GL ++++ E +V EG +D++A G+ VA GT+ TADH ++ Sbjct: 240 PIFTKGKVFFGLDKSKRALLEAQSAIVCEGQLDLIACYMAGVQNMVAPQGTALTADHARI 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R V+ C+D D AG++AA R+L++ L G +R +P DPD+ +++ G E Sbjct: 300 LKRYAEEVVLCFDSDNAGQNAAVRSLDSLL---ASGLAIRVAVVPAPHDPDSFIKEYGGE 356 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AF+ +++A + N L D+++ GR + + + L Q+ Sbjct: 357 AFKELVKKASGFFDYYLNRLCETNDVASDKGRLIILQEMAEAVYKTGNVVLIDTYAQKTA 416 Query: 417 NKLGILDDSQLERLMPKAAESGVS----------RPVPQLKRTTMRILIGLLVQNPELAT 466 +LG+ ++ + + +P T + L+ E Sbjct: 417 FRLGVPPEAVRAEFRKASRSKNATPLEVEEAIEIKPSKVPLNTPEHWFLKLIFLQEEGMD 476 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT---GQLLEHYRGTNNAATLEKLSMWD 523 + +LD N + L + + V T L + + + S + Sbjct: 477 WI--HAHLDPNWIQHLTVRQIAVMRLAVHAQGTWQGVATFLNDCESEEMRSLITEASSEE 534 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER-------LELWTLNQ 576 Q D + + + +E + L GL +EER +L L + Sbjct: 535 RPIPNP--TQQMNDIVLRLRNQFIERQMAVLAQESGKPGLGDEERLAILVQQQKLRQLKR 592 Query: 577 E 577 + Sbjct: 593 Q 593 >UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34_ACIFE Length = 603 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 176/599 (29%), Positives = 273/599 (45%), Gaps = 36/599 (6%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 F + D++ ++ V LK++G + CCPFH EKTPSF V+ + +HCFGCGA Sbjct: 10 NFKEQVRQAADLLTIVSETVSLKRRGTQYWGCCPFHGEKTPSFKVDPARGLFHCFGCGAG 69 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 G+ ++M D L F E +++LA + + VP A S + + + D + F+ Sbjct: 70 GDVFSYVMKRDNLTFPEALKQLAEKYGIPVPERAKSAREIAREKESREVMGANDLASRFF 129 Query: 128 QQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L QYL RG+ ++I F +G APP + + + L+ AG Sbjct: 130 HSCLVNTRYGERGIQYLAGRGIGRDIIDSFGLGLAPPDFQTLSTALEKRGVTEEVLLKAG 189 Query: 187 MLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGR 243 ++ +G R YD+FR RVM PIRD RGRV+GF GR+L D KY+N+PET FHKG Sbjct: 190 LVSPRQRGTRVYDKFRARVMIPIRDPRGRVVGFTGRILDKDASPAKYMNTPETAWFHKGN 249 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 L+GL A + + L+VEG+MD ++L GI++AVAS+GT+ T LL R T Sbjct: 250 LLFGLDRASGPIRKRQQALIVEGHMDAISLHAAGIDWAVASMGTAFTEHQAALLKRLTPE 309 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ C+D DRAG AA RA+ AL G + R M + DG+DPD +RKEG+EAFE + Sbjct: 310 VVFCFDSDRAGLAAAMRAIPLALQ---AGLKCRVMHVTDGKDPDEFIRKEGREAFEELLN 366 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A P + ++++ + DL T G+ LPL + +EL +L I + Sbjct: 367 NAKPGMDYQVDTVLGECDLETLGGKVEAVDKVLPLFRDCQSDVEVGERIRELSRRLAIDE 426 Query: 424 ---DSQLERLMPKAA-------------ESGVSRPVPQLKRTTMRILIGLLVQNPELATL 467 S+ +L + + + V+ P Q +R +R + + P Sbjct: 427 GLIQSEYRKLTHQESGGRAYNPEWLTQQKVKVTSPTEQAERLVLRAFLEGIPPRPG---- 482 Query: 468 VPPLENLDENKLPGL-GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 + ++D P +F + L H L++ Sbjct: 483 QEGIAHVDSFTSPSRQAIFTTFLRMVQEGTYKDPRDLFPHLDDAGAGELTGILTL---NV 539 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER-----LELWTLNQELAK 580 +K D L + + L+ E+ + E+ E + E+ K Sbjct: 540 EKGTLPSILADCLRRLQIAALDREYEKHSQLAEKYEKEGNEKFLQELAECRRIKMEIGK 598 >UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 Length = 590 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 174/593 (29%), Positives = 282/593 (47%), Gaps = 45/593 (7%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG-CG 65 + ++ + DIV I KL K G+ CPFH+EK SF V E Q +HCFG C Sbjct: 2 NDAVEEIKQKLDIVSFIGQYTKLTKAGRTMRGICPFHSEKHGSFFVYPEAQNWHCFGACN 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+M + L+F +E LA + +P + R QR+ LY++ Sbjct: 62 TGGDIFAFVMKKEGLDFKGALELLAEKAGVSLPSQINPQI----RDQRERLYEINLAAAQ 117 Query: 126 FYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +Y L P A SAR YL+ RGL+ + +A F +G+A P W + + L+ Sbjct: 118 YYHNLLLNSPQAESARSYLKSRGLNEQSLADFQLGYALPEWQGLYDYLKERSYTDEDLLK 177 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG++V +D+GR +DRFR +++PI + +G++ GFG RV+ N PKY NSP+TD+F+K Sbjct: 178 AGVIVRSDEGRIHDRFRNNIIYPIANYKGQIAGFGARVMDNSQPKYRNSPQTDLFNKSSL 237 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL+ A E N+ ++VEGYMD + Q G VA +GT+ T I L+ R T ++ Sbjct: 238 LYGLHLASASIREKNQAIIVEGYMDAIMSHQGGFTNTVACMGTALTDRQIALVKRQTKHL 297 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I D D AG +A RA++ ++ +R G+DPD ++R + ++ ++ Sbjct: 298 ILGLDADSAGEEATLRAIDYENQIESE---IRVAVPEGGKDPDEIIR-HAPQTWQEILDN 353 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A PL ++F +DLS+ G+A L+ LP+IS++ + + +L + + Sbjct: 354 ARPLLDYIFEHSQKGLDLSSAAGKAGLTDRLLPIISKMEDGVRQSHYLGKLAEMVSTSQN 413 Query: 425 SQLERLMPKAAESGVSRPVPQLKRTT----------MRILIGLLVQNPELATLVPPLENL 474 LER+ E+ +++ + + + + LL ++PEL+ L Sbjct: 414 RILERMKKLKNETRITKVLEKEAPSKTVSAAKNPALEEYALSLLFKSPELSRFAGKL--- 470 Query: 475 DENKLPGLGLFRELVNTCLSQPGLT--TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + + +REL+ L E+ R +D++ +KN A Sbjct: 471 -HPEYLEIPQYRELLAVYSQSAEKDNLRAALDENLRE-----------YYDNLMNKNPAN 518 Query: 533 QTFTDSLNHMFDSLLELRQEEL--IARERTHGL---SNEERLELWTLNQELAK 580 D +D L LR+ L +A + L S E E TLN + K Sbjct: 519 DNIEDKF---YDLCLRLRERYLRNLAVKLNQALNEISQPETAEYQTLNDQCVK 568 >UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE26_9CLOT Length = 617 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 166/594 (27%), Positives = 284/594 (47%), Gaps = 36/594 (6%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G I FI L DI +I + V +K++G+N A CPFH EKTPSF + + Q ++CF Sbjct: 32 GMISESFITQLKLACDIESIISSYVPMKREGRNKKALCPFHLEKTPSFVIYEDTQSFYCF 91 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ I F+M + L+++E V LAA + VP + G + + + ++ Sbjct: 92 GCGAGGDVITFIMRIENLDYIEAVRFLAARVGMTVPED---GQDDRKARLKARILEMNRE 148 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ +L+ P + +Y R L+ + + + +G+AP W ++L+ + + Sbjct: 149 AARFFHANLKSPAGQAGLRYFAGRRLTKQTVVTYGLGYAPDDWHSLLRHLSSKGYSYEEQ 208 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 A ++V + +G YD+FR RVMFPI D RG VIGFGGRVL + PKYLNS +T +F K Sbjct: 209 EAAALVVKSQKGNYYDQFRNRVMFPIIDLRGNVIGFGGRVLDDSKPKYLNSADTPVFKKS 268 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ L A+Q + L++ EGYMDV+A+ Q G++ VA+LGT+ T++ +L+ + + Sbjct: 269 RNLFSLNFAKQA--KERTLVLAEGYMDVIAMYQAGVHNVVATLGTALTSEQARLISQYAD 326 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +VI YD D G+ A +A + G + R + L D +DPD ++K G F+ + Sbjct: 327 DVIIAYDSDEPGQIATAKASRL---FEEAGVEARVLVLKDAKDPDEYIKKFGAGRFQVLL 383 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 EQ+ +++ F L + DL PD + + A +I+ + R L + G+ Sbjct: 384 EQSENVTSSKFKRLKEKYDLELPDEKIKYLGEACGVIAGLYDSLERDVYASTLAAECGLT 443 Query: 423 DDSQLERLMP--------------KAAESGVSRPVPQLKR---------TTMRILIGLLV 459 + L+++ + +SG + P +L +IG L Sbjct: 444 KEVVLDKVAAIRKSRFGRQKKREWRDIQSGRAAPPDRLNPESAKYPKEAAAEEGIIGFLC 503 Query: 460 QNPE-LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 +NP+ L L+ ++ D LF +V+ + + E Sbjct: 504 KNPDYLEYLLGKIQPGDFPTSWNKRLFELIVDKIQNNLPIELSFFNEQLSPDEMGRFSGI 563 Query: 519 LSMWDDIADKNIAEQTFTDSL----NHMFDSLLELRQEELIARERTHGLSNEER 568 L+ + ++++ + + D L N + D + + R L N+ + Sbjct: 564 LARFRELSNTKQSLDDYIDVLLKHKNRLKDEDRFDLPVDAYEKRRQELLKNKGK 617 >UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7A3 Length = 739 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 155/459 (33%), Positives = 238/459 (51%), Gaps = 14/459 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I++L +RT I +++ V LK G + CPFH+EKTPSFTV + Y Sbjct: 1 MAGLIKREDIDELRSRTRIDEVVGEFVTLKTAGIGSLKGLCPFHDEKTPSFTVRPQVGMY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ FL ++L FVETVE LA + + +E G GP + + +RQ L ++ Sbjct: 61 HCFGCGESGDVFSFLQKVEQLSFVETVEALAGKIGMHLRYEDGKGPDREQASRRQRLLEM 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ Q L+ R++LE RG F +GFAP WD++ + Sbjct: 121 HEVAQRFFTQCLESEQGQIGREFLEGRGFPLSSSKEFGLGFAPKSWDSLTSQLKRAGFTE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + ++ G+ +G YDRFR RV++PI+D R IGFG R L + PKYLN+PET Sbjct: 181 EEILAGGLASEGGRG-IYDRFRGRVVWPIKDMTSRTIGFGARRLYDDDKGPKYLNTPETA 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK + LYGL A++D A+ R+++VEGY DV+A G+ AVA+ GT+ +H++++ Sbjct: 240 LYHKNQVLYGLDLAKKDIAKTKRVVIVEGYTDVMAAHLAGVTQAVATCGTAFGPEHVKIV 299 Query: 298 FRA-----TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 R T VI +DGD AG+ AA RA E + Q PDG DP L + Sbjct: 300 RRLLGDDPTGQVIFTFDGDAAGQKAALRAFEFESEFTA---QTFVAVEPDGLDPCDLRMQ 356 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G A ++ PL F+ + + + DL + +GR + +++ + + Sbjct: 357 KGDGALRELIDGRKPLFEFVITTAISRYDLDSVEGRIAAVKASAEVLADIRDRNSLSHYY 416 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM 451 + + ++G+ D + + A SRP R Sbjct: 417 RFVAGRIGVDIDEVESAV--RDARKRPSRPQANQSRQPQ 453 >UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_LACDB Length = 612 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 167/550 (30%), Positives = 267/550 (48%), Gaps = 23/550 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRI FIN++ +IVD+I V L+K+GK++ CPFH EKTPSF+VN +KQF++ Sbjct: 1 MAGRISEDFINEVRGSVNIVDVISQYVSLEKRGKDYVGLCPFHQEKTPSFSVNPDKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN F+M +++ F E+VE +A N+ +P E P ++ L Q+ Sbjct: 61 CFGCHKGGNVYKFIMEKEEVTFPESVERVAEFANIPMPQEYQEQPVKLN-----PLMQMH 115 Query: 121 DGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L + +Y KRGL +++ F IG+AP D +L G Sbjct: 116 KEAADFYQQVLMTTKIGERGLEYARKRGLDDDLLKHFKIGYAPGKSDLLLTYLRGEGYTD 175 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 L ++G+ V + GR +DRFR+R+MFP+ D+ G ++ F GR + +D PKYLNSPET Sbjct: 176 NQLAESGLFVKSQDGRLFDRFRDRLMFPMSDESGHLVAFSGRRISDDPEEPKYLNSPETS 235 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K L+ EA++ + L++ EG+MDV++ + G+ +AS+GTS T + ++ Sbjct: 236 IFNKSDLLFHFSEAKKHARKEGHLVLFEGHMDVISAYKAGVKTGIASMGTSLTQQQVYMI 295 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T V+ YDGD G+ A RA+ L L + LPD DPD V++ G ++ Sbjct: 296 RRITKQVVINYDGDDPGQHATERAV--GLFKQAGNFDLGIVILPDKLDPDEYVKQYGPDS 353 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 ++A + A+ + F L + +++ + + A+ I+ +P + L Sbjct: 354 YQAAIRGAISTTDFFLQRLKKKYNINNEREQVAYLSEAVAEIAALPNPVEQELYVGRLAK 413 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 + G+ D+ + +SR + +R +L PELA L P + Sbjct: 414 ETGVSLDAL---------KVNLSRARRKQRRVDQHTSSEVL---PELAPLAPAADP-QPV 460 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 R L S + L KL + +N++ F D Sbjct: 461 TRALKAQQRLLYAYIYSDEARDYLIVNGFVFPNPEYERLAKLWLNYIETHENVSLSGFLD 520 Query: 538 SLNHMFDSLL 547 + S++ Sbjct: 521 FIPEELQSII 530 >UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS59_DYAFD Length = 674 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 154/453 (33%), Positives = 239/453 (52%), Gaps = 11/453 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RI + + DIV+++ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFG Sbjct: 2 RINPETVERIKHAADIVEVVGDFVSLKKKGANYSACCPFHNEKTPSFNVNPVRQIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G++I F+M+ D + + E + LA +N+EV E + + ++ R++LY +++ Sbjct: 62 CGAAGDSIKFVMDIDGIGYGEALRYLAGKYNIEVEEEELTDEETLRQNARESLYIILNFA 121 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 +YQ L A Y +RG + E+ +F +G++ WD+ K + + Sbjct: 122 KNYYQHQLHHSDEGQAIGLSYFRERGFTSEIRKKFELGYSLDNWDSFSKEALEKGYSAEI 181 Query: 182 LIDAGMLVTNDQGR--SYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 L AG+L+ + YDRFR RV+FPI + G+ I FG R+L + PKYLNSPET+ Sbjct: 182 LERAGLLIHKEGSHTAGYDRFRGRVIFPIHNIAGKTIAFGARILKTDKNQPKYLNSPETE 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK LYG+Y+A+ + +VEGY DV++L Q GI VAS GTS T + I+L+ Sbjct: 242 VYHKSEVLYGIYQAKNAIRQLEHCYLVEGYTDVISLHQAGIENVVASSGTSLTVEQIRLI 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T N+ YDGD AG AA R L+ L +G + + PD EDPD+ VR+ G EA Sbjct: 302 GRFTPNITILYDGDMAGIKAALRGLDLVLE---EGLNVNVVLFPDNEDPDSYVRRVGAEA 358 Query: 358 FEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+A ++ A F L+ + P A + + I ++P R Sbjct: 359 FKAHLKSASKDFITFKTEILLQDAG-NDPFKLAAVIQEVVNSIVKIPDAIKRQVFFHRTS 417 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRT 449 + + + + + ++P + +++ Sbjct: 418 EMMRVDEQMLITEGNKLLRKQHSAKPAERPRQS 450 >UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTY2_DESHD Length = 614 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 171/455 (37%), Positives = 243/455 (53%), Gaps = 11/455 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + ++ R+DIVD I V+L+++GKN+ CPFH EKTPSFTV +KQ ++ Sbjct: 1 MDYRIPEEIVEEVRLRSDIVDTISEYVRLQRKGKNYLGLCPFHAEKTPSFTVTPDKQIFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN FLM + FVETVE LA H + +P + S + ++ +R+ ++ Sbjct: 61 CFGCHTGGNVFSFLMKKENWNFVETVEHLAQKHGIVLPEKELSPREKEQQTRRRRWEEIH 120 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D ++ + L +P RQY ++RG+ E I +F +G+AP WD +L+ + Sbjct: 121 DWATGYFHEVLLHRPEGEPGRQYFQQRGMDEETIKQFRLGYAPDRWDGLLEALSARGVSP 180 Query: 180 QSLIDAGMLVTNDQG-----RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 Q L AG+ + DQ YDRFR+RV+F I D R + IGFGGRVL + TPKYLNSP Sbjct: 181 QELAQAGLALERDQSEGRSRGFYDRFRKRVIFAILDSRHKTIGFGGRVLDHSTPKYLNSP 240 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET F+KG LYG++ A Q E L+ EGYMDV+AL + G AVASLGT+ T D Sbjct: 241 ETAFFNKGHHLYGMHRAHQGIREHGFALLAEGYMDVIALQKAGFKNAVASLGTALTRDQA 300 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +L+ R T V+ YD D+AG A RA E G ++ + L +DPD ++ G Sbjct: 301 KLIHRYTGRVVVVYDSDQAGTQATLRAGELLQDM---GFRVDILRLSGAKDPDEYLKTFG 357 Query: 355 KEAFEARMEQAMPLSAFLFN-SLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E F + QA P F + + + LS P+ +A L P I +V R + Sbjct: 358 VEEFNKALAQAEPYIQFKYQVHVQTKPTLSAPE-KAELVRELAPDIVKVQSPVEREGYER 416 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKR 448 L +LG+ D E + + +L R Sbjct: 417 FLSLELGLTLDRVQEEIAGFDRKPSKKASGEELFR 451 >UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0B7_9ACTO Length = 663 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 172/518 (33%), Positives = 247/518 (47%), Gaps = 30/518 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M+G I + I + D+ +++ V L+ G N F CPFH+E TPSF VN + F+ Sbjct: 1 MSGLIIKADIEKVKDTVDLEEIVSNYVTLRPAGINTFKGLCPFHDENTPSFNVNTARGFW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+AI FL D L F + VE LA + + + +E G P+Q + +RQ L + Sbjct: 61 HCFGCGEGGDAISFLQKIDHLSFTDAVEHLAGKYGITLRYEEGKAPTQ-DYGKRQRLLDM 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ L P A RQ+L +RG S E F +GFAP GW+ + Sbjct: 120 HRVAEEYYQAQLHSPEALPGRQFLSERGFSAEAAKHFGVGFAPSGWNGLSNVLRAQGFTD 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q LI G+ +G YDRFR R+M+PIRD G IGFG R L ++ PKYLN+PET Sbjct: 180 QELITGGLASQGSRG-VYDRFRGRLMWPIRDLTGATIGFGARRLLPDDNGPKYLNTPETP 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK + LYGL A++ A ++++VEGY DV+A GI+ AVAS GT+ ++H++++ Sbjct: 239 IYHKSKVLYGLDLAKRSIAAKRQVVIVEGYTDVMAAHLAGIDTAVASCGTAFGSEHVKIV 298 Query: 298 FRA-------------------TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFM 338 R VI +DGD AG+ AA +A Q Sbjct: 299 RRLLGDIADPSMGLQLASGESRGGEVIFTFDGDAAGQKAALKAY---GEDQNFALQTFVA 355 Query: 339 FLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPL 398 G DP L EG EA + +PL F+ + + VDLSTP+GR A P+ Sbjct: 356 IEKRGMDPCDLRIHEGDEAIRKLVAARIPLFEFVLRTTLTAVDLSTPEGRVAGLRAAAPV 415 Query: 399 ISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLL 458 +S + L+ + L LG+ + A + + PQ + + Sbjct: 416 VSSIRDRALQKEYVRLLSGWLGMEARDVASEVARAAKMAAYAETQPQAQVKPQSETAKVT 475 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP 496 +P A PL D P L + + + L P Sbjct: 476 --SPTEAESEAPLAYGDMRS-PRFKLESQALASVLQCP 510 >UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD76_THET1 Length = 623 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 189/601 (31%), Positives = 275/601 (45%), Gaps = 33/601 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I ++ +R DIV++I + V+L++ G F A CPFH EKTPSF V E+Q YHCFGCG Sbjct: 6 RTIIEEIKSRIDIVEVIGSFVELRRTGSRFKALCPFHQEKTPSFIVFPERQTYHCFGCGK 65 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I FLM L F E VE+LA + FE + + + +LY++ Sbjct: 66 SGDVISFLMETQNLSFREAVEQLAQKAGV--RFEPEKPKEKSPQSEIDSLYEINKLAARL 123 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L A AR YL+ RGLS + +G+AP WD K + + A Sbjct: 124 FNHLLMNSKAAEHARDYLKDRGLSPATWEEWMLGYAPDSWDVTSKFLQKRGFSEDLIFKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+ V G YDRFR+R+MFPI+DK GR +GFGGR +G PKY+N+PET IF KG + Sbjct: 184 GLTVERTGGGYYDRFRDRLMFPIKDKDGRFVGFGGRAIGEGIPKYMNTPETPIFTKGEHI 243 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YG+ A+ E N ++VVEGY+DV+ QYG VA+LGT+ T H++LL + N+ Sbjct: 244 YGIDVAKSAIKESNLVVVVEGYVDVITAHQYGFRNVVATLGTAITPSHVKLLSKMAANIC 303 Query: 306 CCYDGDRAGRDAAWRALETA--------LPYMTDGRQ----------LRFMFLPDGEDPD 347 D D AG+ AA R E +P + GR ++ LP GEDPD Sbjct: 304 LALDADTAGQAAALRGWEVLRDSIRRRSIPIRSKGRVISSDSKLEVLVKIATLPKGEDPD 363 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 TL+RK+ E + +E A + F + DL TP G+ + P+I + Sbjct: 364 TLIRKDPSE-WARIIEGAKTVIDHFFEIVERGYDLKTPQGKTQAIADLAPVIGDLGNPIE 422 Query: 408 RIYLRQELGNKLGILDDS-----QLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP 462 R + L +G+ ++ R G + P+ + +++ LL++ P Sbjct: 423 RAHYESRLAKLVGVDENEIHLHVVQARKQSSRPGGGEAAPINLNSVSQEEMVLALLIRYP 482 Query: 463 ELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT--NNAATLEKLS 520 L +P D P + ++ L LT LLE + + L L+ Sbjct: 483 RLLGNLPEDFINDMENSPNKEILEKM--QTLGHEKLTPESLLESVDESLRQHVERLVALA 540 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELR--QEELIARERTHGLSNEERLELWTLNQEL 578 N +N + L Q L+ +E E L L L Sbjct: 541 STQPELFSNEQLLELNKKINLIRRQRLRDLLHQHSLLLKEAMEQGDEESVRSLLQLVPTL 600 Query: 579 A 579 A Sbjct: 601 A 601 >UniRef50_B5JTS5 DNA primase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTS5_9GAMM Length = 506 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 225/508 (44%), Positives = 301/508 (59%), Gaps = 14/508 (2%) Query: 75 MNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQP 134 M YD LEF E +EELA LEVP E +G Q +R Q LY LM + YQ L++ Sbjct: 1 MEYDNLEFPEAIEELARTLGLEVPREESAGQQQ-QRRQSADLYDLMQQASLHYQSELKRH 59 Query: 135 VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG 194 + A YL++RGLS + IGF P WD ++KR G N +Q L AGML+ ND G Sbjct: 60 --SQAIDYLKQRGLSGSTAKDYGIGFVPESWDYLIKRLGKNDRTQQQLESAGMLIRNDSG 117 Query: 195 RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQD 254 R YDRFR R+MFPIRD RG+ I FGGRV+G PKYLNSPET IFHKGR+LYGLYEA++ Sbjct: 118 RIYDRFRNRIMFPIRDPRGKTIAFGGRVMGEGEPKYLNSPETPIFHKGRELYGLYEAKRH 177 Query: 255 NAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAG 314 N +++VVEGYMDVV LAQ+G+ YAVASLGT+ TADHIQ LFR ++V+ C+DGDRAG Sbjct: 178 NKTLEKIVVVEGYMDVVMLAQHGVRYAVASLGTACTADHIQRLFRLVDDVLFCFDGDRAG 237 Query: 315 RDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME-QAMPLSAFLF 373 RDAAWRAL LP + +G+Q+RF+FLP+GEDPD++V+ EGKEAFE R+ Q+ PLS +L Sbjct: 238 RDAAWRALNNCLPALQNGKQVRFLFLPEGEDPDSMVQSEGKEAFEQRLAQQSQPLSEYLI 297 Query: 374 NSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLER---- 429 + L Q D + DG +R + LA PL+ Q+ +T + L +EL + D + Sbjct: 298 DRLKAQCDTQSIDGISRYAALAKPLLEQIQADTFKRLLTEELARAVQRPVDQLFGQGGLN 357 Query: 430 --LMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLV--PPLENLDENKLPGLGLF 485 + + P QL T R++I L+ P LA V L + + Sbjct: 358 APPPTQGNTTQKKPPKAQLSITPPRLVIAALLAQPSLAQTVTDEDLALVASLDERAVPFI 417 Query: 486 RELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDS 545 EL P L T LL+ YR T + L +L+ ++ A IA F D+ +++ Sbjct: 418 LELFQLLQQHPQLNTAALLDRYRDTPFDSALMELASYEFQAADKIAI-EFQDAFSNLLKR 476 Query: 546 LLELRQEELIARERTHGLSNEERLELWT 573 + R++ LI R + LS+ E+ L Sbjct: 477 ARKQRRQTLIQRPLST-LSDAEKSFLKQ 503 >UniRef50_B1HTI3 DNA primase n=5 Tax=Bacteria RepID=B1HTI3_LYSSC Length = 610 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 165/597 (27%), Positives = 281/597 (47%), Gaps = 33/597 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 +AG+IP I + ++DIVD+I ++L K+G+N+ CPFH E+TPSF+V+ +KQ +H Sbjct: 5 LAGKIPEEVIEQIRTQSDIVDVISEYMQLTKRGRNWFGLCPFHGEQTPSFSVSSDKQIFH 64 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIERHQRQTLYQL 119 CFGCGA GNAI F+M+ + + F + V +L + + E G ++ + + + Sbjct: 65 CFGCGAGGNAITFVMDIEGISFPDAVVKLGERAGIHLDVEPTFPGGTKKISKAEERMKEA 124 Query: 120 MDGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 F+ L YL +RG + E+I IG++ P +D + N Sbjct: 125 HAFTADFFHHLLLNTEDGEEPLNYLLERGFTRELIESNNIGWSLPSFDALTILLERKGYN 184 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPE 235 Q + ++G+++ + + R +DRFR R+MFPIRD+ G++I F GR+L + KYLNSPE Sbjct: 185 LQEMAESGLIIKREGEERYFDRFRGRIMFPIRDENGKIIAFSGRILSSTGEEAKYLNSPE 244 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 + IF K LY L +A+ + +++++EG+MDV+A G+ AVA++GTS T HI Sbjct: 245 SPIFQKSEVLYNLDKARTSIRKNRQVVLMEGFMDVLAANSVGVMNAVATMGTSLTNQHIT 304 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L R V CYDGD AG DAA RA + T+ ++ LP+ DPD +R G Sbjct: 305 KLKRLVEQVTICYDGDNAGFDAAKRAAQLLH---TERMKVDIAVLPEKLDPDEYIRTLGG 361 Query: 356 EAFEA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +AF+ +E AF+ + + + L ++ R ++ Sbjct: 362 QAFKEQILENPHAYIAFMMMHARRNKNFQFENDTLQYIQEVLEQLTGRSSPVERDLYIRQ 421 Query: 415 LGNKLGILDDS-----------QLERLMPKAAESGVSRPVPQLKR------TTMRILIGL 457 L N+ I +++ Q+ P+ S PV Q ++ R+L+ Sbjct: 422 LSNETNISEEAIYAQFRKLEANQVRSAKPEMPTQMPSMPVTQQQKPMDAAERAERLLLAH 481 Query: 458 LVQNPELATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 ++ N ++ V E + + + +F LV + +E + Sbjct: 482 MLHNIDVVDRVLRSEQKEPFVRDAYMAVFVRLVGFYEEYGHPDYQRFMEILDDAELRKIV 541 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 + ++ + D + AE DS+ + + R E+ I ++ E+ E Sbjct: 542 MEAALVER--DPDQAEAEVVDSIRQLQ----KYRIEQEIYQKMHESKEAEKMHEYAR 592 >UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO Length = 626 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 186/625 (29%), Positives = 298/625 (47%), Gaps = 52/625 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP I+ + + DIVD+I V+LKKQG+N+ CPFH EKTPSF+V+ EKQ +H Sbjct: 1 MA-RIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGEKTPSFSVSPEKQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHN----LEVPFEAGSGPSQIERHQRQTL 116 CFGCG GN FLM +D L FVE+V+++A M + +E+P E + E + + Sbjct: 60 CFGCGKGGNVFSFLMEHDGLTFVESVKKVADMSHLDVAIELPEERDTSNLPKETSETAKM 119 Query: 117 YQLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 ++ Y L + T+A YL++RG+S +++ F IGFAP + Sbjct: 120 VEMHQLTAKLYHYILMETEEGTAALTYLKERGMSEQMMTTFQIGFAPNHHATITSFLEKR 179 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSP 234 + Q AG+L D G+ DRFR R+MFPI + RG++I F GR+ +D PKYLNSP Sbjct: 180 GMDLQLAGAAGLLSERDDGQMVDRFRNRIMFPITNDRGQIIAFSGRLFDRDDGPKYLNSP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +F+K R L+ EA+Q + + ++EG+MDV++ + G+ AVAS+GTS T +H Sbjct: 240 ETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVISAEEAGVQNAVASMGTSLTEEHA 299 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 L+ R TN I CYDGDRAG +AA++A L + + + LP G+DPD +R G Sbjct: 300 DLIKRLTNRAIICYDGDRAGIEAAYKA--GTLLVERNRLDVFVLQLPAGKDPDDFIRASG 357 Query: 355 KEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E F+ + Q M +AF + L + +L + L I+++ R + Sbjct: 358 PEKFKEVYKQQRMTWTAFKIHYLRKERNLQNETEQIGYIDDCLREIAKLDQAVERELYLK 417 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPE-----LATLV 468 +L ++ + ++ ++L S SR + + + P+ L + Sbjct: 418 QLADEFELTIETLKQQLQQSLKNSQKSRQMASYNEPPIDD--SFMGMMPQEGAEMLFSFE 475 Query: 469 PPLENLDENKLPGLGLFRELVN----------------TCLSQPGLTTGQLLEHYRGTNN 512 P + L + + L + ++ L+ ++ N+ Sbjct: 476 QPAQKLSAHTISEQQLMKAMMESRDNFLLIKQLLGDTTFYHDNYEALYTYLIGYFAEGND 535 Query: 513 AATLEKLSMWDD-------------IADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 A + + D I+ + F D + + LE +++EL Sbjct: 536 ADPTKFMDSVPDAAMKGLISSLEMVISPDEQGKPQFEDYIRSLKRYKLEQKKKELEQELA 595 Query: 560 T---HGLSNEERL---ELWTLNQEL 578 T + E E+ LN++L Sbjct: 596 TYNRENDNENEIRVMLEIVQLNRQL 620 >UniRef50_A7BE18 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE18_9ACTO Length = 656 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 164/547 (29%), Positives = 257/547 (46%), Gaps = 54/547 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I + I + I ++I V L+ G + CPFH+E+TPSF V + Sbjct: 1 MAGLIRKDDIEAVRNAVKIDEIIGEHVALRPAGIGSLKGLCPFHDERTPSFNVRPHLGMF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQ 118 HCFGCG G+ I F+ D L F E VE LAA + + +E G + E +RQ L Sbjct: 61 HCFGCGESGDVISFVQKIDHLPFTEAVEMLAAKAGITLHYEEGGARVRTEEPGKRQRLLD 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 FYQQ L P A R +L +RG + + A F +G+AP WD++ + Sbjct: 121 AHRVAEEFYQQQLASPEAHKGRTFLAERGFTQVMCAHFGVGYAPASWDSLTRHLRSKGFT 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPE 235 Q + +G+ +G YDRFR R+++PIRD G +GFG R L + ++PKYLN+PE Sbjct: 181 DQEIQISGLGSQGSRG-VYDRFRGRLVWPIRDITGATVGFGARRLDDSDKESPKYLNTPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T I+ K + LYGL A++ A +++++VEGY DV+A G+ AVA+ GT+ ++H++ Sbjct: 240 TPIYKKSQLLYGLDLAKKTIATEHKVVIVEGYTDVMAAHVAGVTNAVATCGTAFGSEHVK 299 Query: 296 LLFR-------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLR 336 ++ R + VI +DGD AG+ AA RA + Q Sbjct: 300 IIRRLLGDHADPAAGVLLSTGRAHGSEVIFTFDGDSAGQKAALRAYGEDQNFAA---QTF 356 Query: 337 FMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLAL 396 P G+DP L +G +A + +PL F S++ Q+DL + +GR + + Sbjct: 357 VAVAPGGQDPCDLRLSQGDQAIVDLVNSRIPLFEFAIRSVLSQMDLRSAEGRVQGLRASA 416 Query: 397 PLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAE---------------SGVSR 441 +++ + LR ++L LG +D +E+ + A +G R Sbjct: 417 GIVAHIKDRALRAEYTRQLAGWLG-MDIPTVEQAIRAAGRVEVLSHEARPGEIEMAGAGR 475 Query: 442 PVPQLKR--------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCL 493 PVP +R R + ++Q+P L + E LD + R + + Sbjct: 476 PVPASERRGPEDPVSRIERQALEAVLQHP-LYAVGSGFEELDGQSFT-VPTHRAVHDAIR 533 Query: 494 SQPGLTT 500 + GL Sbjct: 534 AVGGLDA 540 >UniRef50_A5CX96 DNA primase n=2 Tax=sulfur-oxidizing symbionts RepID=A5CX96_VESOH Length = 594 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 210/579 (36%), Positives = 311/579 (53%), Gaps = 27/579 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I F +DL R +IVD+I+ RV LKK GK++ ACCPFH+EKTPSF V+ EKQ Y CFGC Sbjct: 4 INADFKDDLPNRVNIVDIINQRVPLKKAGKDYKACCPFHHEKTPSFIVSAEKQMYKCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G I F+M +D L VE VE +A+ + V ++ P LM + Sbjct: 64 GDGNGVIKFVMKFDNLGLVEAVETIASESGISVVYDKNIKPIDTR---LTRYLDLMQRVG 120 Query: 125 TFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY Q L+Q +A A Y++ RG+S ++ RF +GFAPP N+L F + ++ L Sbjct: 121 QFYIQQLKQSLAKNKAVGYVKYRGISSQIAKRFELGFAPPN-SNLLFGFKQDSQDIADLK 179 Query: 184 DAGMLV--TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFH 240 G+L G+ YD F++R+MFPI + +G +I FGGR N+ KY NSPET IF Sbjct: 180 VMGLLCDDQYRSGKYYDLFKDRIMFPIHNNKGNIIAFGGRSCNNNFKAKYFNSPETPIFS 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K ++LYGLY ++ + + +LVVEGYMDVV+L Q GI+ VA+LGT TT +H+ +LFR Sbjct: 240 KSKELYGLYHMRKYSRSIDYILVVEGYMDVVSLHQAGISQVVATLGTVTTVEHLNILFRT 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 TN +I C+DGD+AG AAWRAL LP + G ++F+FLPD EDPDTLV+KE +AF Sbjct: 300 TNTIIFCFDGDKAGEKAAWRALNITLPVIKAGITIKFLFLPDKEDPDTLVKKESSQAFVK 359 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+E A LS FLF+ + +VD +T +G+ L+ ++ +T + L + L ++ Sbjct: 360 RIENAQFLSKFLFSHIKTEVDFNTIEGKTLFLERVSMLLRKINYKTYQHQLLEGLAGEVN 419 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQN--PELATLVPPLENLDENK 478 + Q+E ++ + S S K + + ++ VP + N Sbjct: 420 QSIE-QIESILERQDISTQSNTFSISKNYEEPPMFNFYDSDEKYQVPMSVPLISN----- 473 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM----WDDIADKNIAEQT 534 L +++ L+ P + ++ R NNA L+KL+ +DI + + EQ Sbjct: 474 ---NSLIDQMIGLLLNYPSMVDKTVMLRVRKINNADILQKLANLVLLQEDITLETMVEQ- 529 Query: 535 FTDSLNHMFDSLLELRQEE---LIARERTHGLSNEERLE 570 F + + + R + L EER + Sbjct: 530 FPQKKQQLLNLYNKKRVLKNYDYKDEFLDALLKIEERQK 568 >UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTG4_9FIRM Length = 600 Score = 479 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 152/426 (35%), Positives = 239/426 (56%), Gaps = 7/426 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ I + ++ + DI +LI V LK+ G N+ CPFHNEKTPSF+++ K + Sbjct: 1 MSFIIDDNLLEEIRDKVDIYELISQYVNLKRSGANYIGLCPFHNEKTPSFSLSPSKGIFK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L F E ++ LA +N+E+ S + + + Q Y++ Sbjct: 61 CFGCGEGGDVISFVMKREGLGFREAIKFLADKYNIELRQAHYSKKDKELKDKAQRFYEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ +L+ + YL KR +S VI ++ +GFA WDN+ + Sbjct: 121 RQAALFFYNNLKN--SKLGMNYLRKREISPAVINKYGLGFANDSWDNLKNHLLSLGYKEE 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L++ +L ++ +G++YDRFR R+MFPI D +GRVI FGGRVLG++ PKYLNS E IFH Sbjct: 179 ELVEINLLSSS-KGKTYDRFRNRIMFPIIDTKGRVIAFGGRVLGDEKPKYLNSSENLIFH 237 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG L+ L ++ + +++++VEGYMDV++L GINY+VASLGTS T L+ R Sbjct: 238 KGSNLFNLNLISKEASR-DKIILVEGYMDVISLYNSGINYSVASLGTSLTQAQAGLIKRY 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 ++ CYDGD AG +A RA++ L ++G + + L +G DPD ++K GK +FE Sbjct: 297 AKDIYICYDGDSAGINATVRAIDIML---SEGISPKIISLAEGLDPDEYIKKYGKISFEG 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ F ++L + +LS+ DG ++ + A ++S + R + G Sbjct: 354 QVANGKSFLDFKIDNLKEKFNLSSSDGLSKFTMEAGKILSSIKNPIERDVYMRNFCKTYG 413 Query: 421 ILDDSQ 426 I S Sbjct: 414 ISTISL 419 >UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I353_9SPHI Length = 645 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 168/578 (29%), Positives = 272/578 (47%), Gaps = 21/578 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I ++ + R DI +++ V LKK+G+N ACCPFHNEK+PSF+V+ KQ Y CFGC Sbjct: 3 ISKLTTEKVKERVDIEEVVGDYVPLKKKGQNLWACCPFHNEKSPSFSVSPAKQIYKCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQLMDGL 123 G G+ I F+M+ + + F E + LA + +EV + P Q + +R++LY + Sbjct: 63 GKAGDPIQFVMDVEGVGFTEAIRHLAGKYGIEVEEDEERTPEQDQAYSERESLYIALGFA 122 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L P S Y ++RG S+ +I +F +G+A GWD++LK + + L Sbjct: 123 RDFFVKNLLSPEGKSIGLSYFKERGFSNSIIEKFDLGYALDGWDHLLKAAKSSGFQEEIL 182 Query: 183 IDAGMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 + AG+++ + R YDRFR RV F I + G+ IGFG R+L + PKY+NSPET + Sbjct: 183 LKAGLILQKEGDPSRVYDRFRGRVTFAIHNIGGKPIGFGARILTKDKNQPKYINSPETAV 242 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK LYG+Y+A++ + +VEGY DV+++ GI VAS GTS T I+L+ Sbjct: 243 YHKSDVLYGMYQAKKAIRAKDNCYLVEGYTDVISMHLSGIENVVASSGTSLTEGQIKLIK 302 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ V YDGD AG A+ R ++ L G ++ + P+GEDPD+ RK G +AF Sbjct: 303 RFTDQVTVLYDGDPAGIKASLRGIDLLLEG---GLNVKAVVFPEGEDPDSYSRKVGSQAF 359 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + E + F + P +A + + I ++P +R QE + Sbjct: 360 QDYLVENSRDFIGFKIGLYQDEF-AKNPIRKAEVIREVIQSIGKIPDPIVRSVYAQEASS 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 L + +D L ++ + + + + E D Sbjct: 419 LLEVEEDVIHTELNKSLIKTQRDQFQKREEAPPH------DLGFEEYLPTEEKSTASDSL 472 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD----KNIAEQ 533 K+ + R L+N + L ++ E + N+ E Sbjct: 473 KIQEKEMIRLLLNYGWEKIDHDELHLCDYLLAETADLKFETPVYEKILITYRQILNMGEA 532 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 D DS ++ +LI ER ++ Sbjct: 533 PTIDFFIRHQDSEMKSVVIDLITPRHEVSTHWSERHQI 570 >UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM Length = 594 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 162/507 (31%), Positives = 249/507 (49%), Gaps = 20/507 (3%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+ + ARTDI+ ++ V LK++G + CCPFH+EKT SF+V + F++CFGC A Sbjct: 7 EAFVQQVRARTDILAVVQGYVSLKRKGSRYWGCCPFHSEKTASFSVVPAEGFFYCFGCHA 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+A FL + + E + A +E P + L ++ F Sbjct: 67 GGDAFKFLSLIEHITPFEAILRQAEQLGIERPARQRDAREEARLRALDDLRRVNALARDF 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L + + YL RG++ E I R+ IGFAP W + F + L+DA Sbjct: 127 FHNCLTMTRYGAAGKAYLAGRGITDEAIERYGIGFAPDAWSKLSDAFQKRGVAQHVLVDA 186 Query: 186 GMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+ V ++G YDRFR RV+ PI D+RGR++GFGGR LG+ PKYLN+ ET +F+K + Sbjct: 187 GLAVRRERGGGIYDRFRGRVIIPIADERGRIVGFGGRALGDAQPKYLNTAETPVFNKRKL 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+G+ A A +VVEGYMD +A + G+ VA+LGTS T+DH LL R + Sbjct: 247 LFGMDRAHSAIARAGYTIVVEGYMDAIAAWEAGVENVVATLGTSFTSDHAALLLRRAPRI 306 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + CYD DRAG++A RAL ++R + LPDG+DPD VR G EAF A +E Sbjct: 307 VFCYDSDRAGQEATLRAL---AAVRGRAAEVRVLLLPDGKDPDEYVRTHGAEAFRALVET 363 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+P AF + Q+ +G+ LP+++++ + R + + + + Sbjct: 364 AVPAPAFRLRHIRAQM-ADGIEGQRAALRAMLPVLAEL-DDVERAAYVRRTAAEFFLDEG 421 Query: 425 SQ---LERLMPKA--AESGVSRP--------VPQLKRTTMRILIGLLVQNPELATLVPPL 471 L R + + AESG + P + + R LI + +P+ + Sbjct: 422 VVADALRRFLRRGGTAESGTAEPTRIAAVRQPDRALQRAGRQLIAAVWHDPDFLASITDA 481 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGL 498 L+ G ++ + G Sbjct: 482 VPLEAFPDDFFGTILRAIDAHIHDGGA 508 >UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO Length = 643 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 180/638 (28%), Positives = 288/638 (45%), Gaps = 64/638 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + I ++ ++L+ G N CPFH+EK+PSF V+ K + Sbjct: 1 MAGRINDDDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPGKGLF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I F+M D L F ETVE LAA + + +E G +R +R L + Sbjct: 61 HCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPSHQRGERIRLIEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY ++L+ P A R +L +RG + A F +G++P GWD++ + G + Sbjct: 121 HQAAAEFYVRALESPEAEIGRAFLAERGFDQDAAAHFRVGYSPAGWDHLTRYLRGKGFSD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + LI +G+ +G DRFR R+M+PI D G ++GFG R L ++ PKYLN+PET Sbjct: 181 KELITSGLSQDGRRG-PIDRFRGRLMWPISDTAGDIVGFGARKLRDDDNGPKYLNTPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DHI++L Sbjct: 240 IYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGNDHIKIL 299 Query: 298 FR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 R + VI +DGD AG+ AA RA E + + PDG DP L Sbjct: 300 RRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAAE---TYIAIAPDGMDPCDLRLA 356 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G ++ +E PL F ++ + DL TP GRA A +++++ +++ + Sbjct: 357 KGDDSVRDLVEPRTPLFEFALRQIVGRYDLETPAGRAAALDEAAAVVAKIKTSSVQREVA 416 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSR------------------------------- 441 +L +GILD + + + A S+ Sbjct: 417 VQLAGLVGILDQEFVVHRVAQLAHWARSKGGDHGDRGGRGGPQGRGPRGGAPQQPAPAPA 476 Query: 442 -----PVPQLK---RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC- 492 P L+ T R L+ L +Q P L + +DE P R+ + Sbjct: 477 PGFSGPALNLRSPAHRTERELLKLALQKPALVSPAFDAYGVDEFTAPPYAAVRQCIEEAG 536 Query: 493 -LSQPGLTTGQLLEHYRGTNNAATLEKLSMWD--DIADKNIAEQTFTDS-LNHMFDSLLE 548 Q + L T+ L ++ I ++T+ L H+ ++ Sbjct: 537 GAEQGIADNREYLVAVMDAAPDNTVRNLVTELAVEVFHGRIIDETYAGMQLVHVRLRAVD 596 Query: 549 LRQEELIARE-------RTHGLSNEERLELWTLNQELA 579 R +++ L+ + E+W L Q Sbjct: 597 RRIDDVQGSLVRLGSHVAPQDLAAAQN-EVWVLQQYAQ 633 >UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 Length = 681 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 200/623 (32%), Positives = 284/623 (45%), Gaps = 59/623 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I LI RV ++ N F ACCPFH EKTPSF K Sbjct: 28 RFPPSFLDEIRDRVPISTLIGTRVSFDRKKSNPPKGDFWACCPFHGEKTPSFHCEDRKGR 87 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ FL + + L F E VE +A M + +P A + QR TLY Sbjct: 88 YHCFGCGVTGDHFKFLTDLEGLSFPEAVERVADMAGVPMP--ARDPEMEKREAQRATLYD 145 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M+ F++ LQ AR YL RGLS F +G+AP + + + G + Sbjct: 146 VMELAAQFFESQLQSATGAKARAYLRDRGLSTATQQAFRMGYAPESRNALKEFLAGKGVS 205 Query: 179 RQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPET 236 R+ + G++V + SYDRFR+RVMFPI D RGR+I FGGR L D P KYLNSPET Sbjct: 206 REQIEACGLVVHGEGIAVSYDRFRDRVMFPIEDLRGRIIAFGGRALSADAPAKYLNSPET 265 Query: 237 DIFHKGRQLYGLYEAQQDNAEP-----NRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 ++FHKGR LY A++ ++ VEGYMDV+ALAQ GI++ VA LGT+ T Sbjct: 266 ELFHKGRVLYNGLRARKACQPQGGEPAKPIIAVEGYMDVIALAQAGIHHVVAPLGTALTE 325 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 + ++LL+R + I C+DGD AG AA+RA + LP + G+ LRF LP+G+DPD LV+ Sbjct: 326 EQLELLWRISPEPILCFDGDGAGLRAAYRAADLGLPVLQPGKSLRFALLPEGQDPDDLVK 385 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 EG AF A + A PL ++ TP+ RA L + S++ E +R + Sbjct: 386 AEGPSAFHAVLRDARPLVEMVWTRETAGGVFDTPERRAELEARLREITSRIANEDIRRHY 445 Query: 412 RQELGNKL---------GILDDSQLERLMPKAAE----------SGVSRPVPQLKRTT-- 450 Q++ + G + Q + + E SG L R+T Sbjct: 446 SQDMRERAQAFFGQGRQGFQNGGQRSQSFTRRNEGARGRGGPAGSGRLAISDSLARSTLV 505 Query: 451 --------------MRILIGLLVQNPELATL-VPPLENLDENKLPGLGLFRELVNTCLSQ 495 ++ L+ +P L L LD L +++ + Sbjct: 506 KGGRQGGAAHAPLRETAIVLTLLNHPRLIEEDFETLAALDLGHDALKTLHLAMLDVLAAG 565 Query: 496 PGLTTGQLLEHYRGTNNAATLEKLSM-----WDDIADKNIAEQTFTDSLNHMFDSLLELR 550 + + ++ L A AE ++L L R Sbjct: 566 RVDDGIAMRRALVDAGHGDLIKMLEQVVKGAKLWTATTLAAEDDAREALRQ--ALHLHQR 623 Query: 551 QEELIARER--THGLSNEERLEL 571 L R L +E EL Sbjct: 624 ARTLHKELRAVEAALETDETGEL 646 >UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCL1_9GAMM Length = 564 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 193/561 (34%), Positives = 278/561 (49%), Gaps = 18/561 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MA RIP+ FI++L ARTD++ L+ +R+ KK G N ACCPFH+EKTPSF+VN +K FY Sbjct: 1 MAKRIPKPFIDELTARTDLLALLSSRITFTKKSGSNHWACCPFHDEKTPSFSVNTQKGFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL-YQ 118 HCFGCG G+AI FLM+YD L F E +E LA + L VP+E + R L + Sbjct: 61 HCFGCGVSGDAIRFLMDYDNLPFPEAIERLAEFNGLSVPYEDDGRQVDPQEKDRYDLGLE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + F+ ++ +AR YL +R L + F +G+APPG + +L G Sbjct: 121 CLADAAAFFHEAFYGESGKAARDYLRQRRLKKATVDTFLLGYAPPG-NALLAHLGSK-YP 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q L D G++ D YD FRERV+FPI + +G+ I FG R +G PKYLNSPET Sbjct: 179 LQLLQDVGLVGVKDD-HHYDWFRERVIFPIHNIKGKTIAFGARAMGEAQPKYLNSPETTW 237 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K +LYGL++A Q LLV EGYMDV+ L Q+G+ AVA+LGT+ HI L Sbjct: 238 FNKRFELYGLHQAMQT--RERTLLVTEGYMDVIKLWQHGVKNAVAALGTAIGDSHISQLR 295 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + V +DGD AG+ AA +ALE + RFMF+P GEDPD+LV K G AF Sbjct: 296 KRAEKVYFSFDGDTAGQKAARKALEAVFSQHDKQHEWRFMFMPAGEDPDSLVEKAGIAAF 355 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + M+ ++P SAF +L + + +A L+ A + +P R LR ++ Sbjct: 356 QQVMDASLPASAFFLQTLDDGAGAQRSAEAQAELAGEAQRWLELLPDADFREILRAQVMK 415 Query: 418 KLGIL------DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 + + + + A V + K ++++ LL+Q P+ A PL Sbjct: 416 RFDLPVLTLSGNAATATHTASPAWRPPREMVVVKPKDKGIQLMARLLLQ-PQCAL---PL 471 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 + L L G + + + D Sbjct: 472 RRWEYPPEDAELQLFWLYCYALQSSGADSAHAEAFLHQHGVYEAVASAAKLLARLDAQQQ 531 Query: 532 EQTFTDSLNHMFDSLLELRQE 552 FTD L ++ + + + Sbjct: 532 RDEFTDMLANLQKNYVSQQAR 552 >UniRef50_Q058D3 DNA primase n=1 Tax=Buchnera aphidicola str. Cc (Cinara cedri) RepID=Q058D3_BUCCC Length = 590 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 212/578 (36%), Positives = 357/578 (61%), Gaps = 3/578 (0%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 +IP+ FI++++ +T+I+++I+ + LKK G N+ CPFH EKTPSFTVN EKQF++C Sbjct: 6 KKKIPQEFIHEIIEKTNIIEIINRYITLKKTGNNYKTLCPFHYEKTPSFTVNSEKQFFYC 65 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCG HGN IDFLM Y+KL+F+ ++ EL ++H +++P+ + + + ++ +Y+++ Sbjct: 66 FGCGIHGNVIDFLMQYEKLDFLSSINELTSLHGIKIPYIQYNSQFKKKFFYKKKIYKILK 125 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + Y ++L + V A YL KRG++ +++ F++G+A + N + Sbjct: 126 KTSKIYIKNLFK-VPNQAYNYLIKRGITSKIMKNFSLGYALSNNYQITNFIKKKTTNIST 184 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFH 240 +ID G+ + DRF+ER++FPI++K G + GFGGR++ + PKYLNSPET F Sbjct: 185 IIDCGLSIYEKNKIKQDRFKERIIFPIKNKYGIIKGFGGRIINQYNYPKYLNSPETITFF 244 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYG+YE N +P ++LVVEGY DV++LAQ INY++A LGT+ T I+ +F+ Sbjct: 245 KKKNLYGIYELILKNPKPKKILVVEGYFDVISLAQKNINYSIALLGTNITTYQIKKIFQI 304 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + +I C+DGD+AGR A+W++L LP++ D + F+ LP EDP +L+ KEGK+ FE Sbjct: 305 SKKIIFCFDGDKAGRIASWKSLNLILPFLYDEYIINFLLLPKNEDPSSLIIKEGKKKFEK 364 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R++++ +F F + +++LS + +LS + +PLI ++P + ++IYLR+ LGNK+G Sbjct: 365 RIKKSESFYSFFFKKVTNKINLSCINDCIKLSRITIPLIKKIPSKIIKIYLRKILGNKIG 424 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 ILD QL++L+ + + + +K TTMR+LI L++Q P+L + ++ + + + Sbjct: 425 ILDSYQLKKLI-QFQKEKKKKINKPVKITTMRLLISLIIQYPKLVKKIKNIKKIKKLHIQ 483 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 G + +L+ + TG LLE +R + + LS W+ I K TF + LN Sbjct: 484 GKKILIKLIELIKKKKIFKTGYLLEFFRFSKLGKIFKYLSTWNHIILKKKIFFTFKEFLN 543 Query: 541 HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + LE + +LI ER G E+ ++W ++++L Sbjct: 544 NFKQQHLEYKYNKLITIERKKGFDVNEKKKIWNISKKL 581 >UniRef50_B0RBC7 DNA primase n=5 Tax=Actinobacteria (class) RepID=B0RBC7_CLAMS Length = 630 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 176/632 (27%), Positives = 270/632 (42%), Gaps = 68/632 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MA I + I+++ +R ++ D++ V LK G + CPFH+E+TPSF V + FY Sbjct: 1 MA-LIRKNDIDEVRSRVNLGDVVGEYVTLKSAGVGSLKGLCPFHDERTPSFHVRPQVGFY 59 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ FL + D + F E VE +A ++ +E G + ++ R L Sbjct: 60 HCFGCGEGGDVYTFLQHMDHVTFAEAVERMAQRIGYQLHYE--DGQAATDQGNRSRLLGA 117 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ + L A R +L +RG RF +GFAP WD + Sbjct: 118 NEAAAEFFVEQLGSEEAEIGRTFLGERGFDQGAAQRFGVGFAPQSWDALSSHLKAKGYAE 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 L+ AG+L D+G +YDRFR R+++PIRD G +GFG R L + PKYLN+PET Sbjct: 178 AELVTAGLLSQGDRG-AYDRFRGRLVWPIRDLTGATVGFGARRLREDDKGPKYLNTPETP 236 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK LYGL A++D + +++VVEGY DV+A GI AVA+ GTS DHI++L Sbjct: 237 VYHKSSVLYGLDLAKRDVSRGRQVVVVEGYTDVMACHLAGITTAVATCGTSFGVDHIKVL 296 Query: 298 FR------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R V+ +D D AG+ AA RA Q P+G DP L Sbjct: 297 RRVLGDDSGLGEVVFTFDPDAAGQKAAMRAFS---EERRFAAQTYVAVGPEGLDPCDLRL 353 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G +A ++ P+ F ++ DL T +GR A P+++ + +LR Sbjct: 354 TRGDDAVRRMIQGKKPMFEFAIKQILADHDLETVEGRVAALRAAAPVVADIRDPSLRPGY 413 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRT---------------------- 449 +EL LG+ L + +G S P R+ Sbjct: 414 ARELAGWLGMD----LTEVGRAVQTAGRSMPADGADRSGGAPQGRHAQGGHGPDDDGAGD 469 Query: 450 -----------------TMRILIGLLVQNPELATLVPPLENLDENKL-PGLGLFRELVNT 491 R + ++Q+PEL + + L + R+ Sbjct: 470 ASRSMSLMDLPTDLATRLERDALMAMLQHPELVGNDLVMRAAQVTFVNESLAVVRD--GV 527 Query: 492 CLSQPGLTTGQLLEHYRGT--NNAATLEKLSMWDDIADKNIAEQTF---TDSLNHMFDSL 546 S L L + ATL K + ++ A++ + Sbjct: 528 IGSMDALGGADWLSRVALEVPESFATLVKQLGVAPLPNRGDADKLAVYVKGVTAELVGRD 587 Query: 547 LELRQEELIARERTHGLSNEERLELWTLNQEL 578 L R+ +LI R + + ER + +EL Sbjct: 588 LLRRKADLIGRLQRTDAT-HERERYQEIQREL 618 >UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1NI78_9DELT Length = 599 Score = 477 bits (1228), Expect = e-133, Method: Composition-based stats. Identities = 177/589 (30%), Positives = 282/589 (47%), Gaps = 21/589 (3%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R + + DI ++I V L++ G N CPFH EKTPSF VN + +HCFGCG Sbjct: 18 RETVRLVKETADIAEVIGEHVTLQRAGANLKGLCPFHAEKTPSFMVNPGRGSFHCFGCGE 77 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ FLM Y ++ F E +++LAA +++ + + S + E QR+ LY + Sbjct: 78 GGDVFSFLMLYHRVGFPEALKQLAARYHIPLAETSLSPQQREEARQREALYAINARAAAL 137 Query: 127 YQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y + L P A ARQYL +RG++ +I RF +G+APP WD + K + A Sbjct: 138 YHRFLLHDPAADQARQYLAQRGMTAAIIERFQLGYAPPRWDFLRKTLEREKFTPATAAQA 197 Query: 186 GMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L + + G YDRFR+R++FPI D+ GRV GFGGR+LG PKYLN+ ET IF K R Sbjct: 198 GLLASKESGGGHYYDRFRQRIIFPIIDQTGRVAGFGGRILGEGEPKYLNTAETPIFDKSR 257 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL++ + + L+VEG D++ALA G+ VA LGT+ TA +++L Sbjct: 258 ILYGLHQHRDALRKARSCLLVEGNFDLLALAAGGVEEVVAPLGTALTAGQLRILRGYVEE 317 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ +DGD AG AA RA+ L G R LP G+DPD+ +R G++ + + Sbjct: 318 VVLLFDGDSAGLKAAMRAVPLFLAEKLSG---RVAVLPQGQDPDSYIRAHGRQGLQELLA 374 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQELGNKLGIL 422 + L+ F+F+ L + L +G+ R+ P++ ++ + LR +LGI Sbjct: 375 EGQSLAEFVFSRLAAEHGLG-VEGKNRIIAELAPMVHELNDQHLLRTRFIAHFSERLGIS 433 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKR-----TTMRILIGLLVQNPELATLVPPLENLDEN 477 + + AA V+ P + R + L + +P Sbjct: 434 SQQFGQSIGRPAARRPVATPPAEAGEEWQLTANERRIFAFLFLH---GQYLPDFLAAGLQ 490 Query: 478 KLPGLGLFRELVNTCLSQPG--LTTGQ-LLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 + R L+ +SQ + + LLEH G + L D + E + Sbjct: 491 EYVSGRAARALLELMISQQQDFINAPEVLLEHTEGRLKSLVSSLLIDGADFYPEEQQEAS 550 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE--LAKK 581 + ++ + E L+ L+ +++ + + ++ L K+ Sbjct: 551 AQELISWLQRHRRRREAEALVQEINAAHLAGDQQKVMELMLKKQTLQKE 599 >UniRef50_C7H3D7 DNA primase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H3D7_9FIRM Length = 591 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 150/566 (26%), Positives = 253/566 (44%), Gaps = 38/566 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP +I +L RTDIVD++ V+LK++G+ + CPFH+EKTPSF V + Q ++CFG Sbjct: 1 MIPHEYIEELTRRTDIVDVVGNYVQLKRKGRLYGGLCPFHSEKTPSFYVYPDTQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+ I F+ + +++ E V+ LAA + P E R + + Sbjct: 61 CGVGGDVIHFVRRINSIDYTEAVKMLAARAGMPEPQEDDKTG-----RLRSRILSMNKEA 115 Query: 124 NTFYQQSLQQ--PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L A AR Y +RGL + I RF +G+AP + + N+Q Sbjct: 116 ARYFHACLNSTVEEARQARAYWRRRGLDDKTIVRFGLGYAPDDGQGLYQYLRDKGYNQQE 175 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 L +G+ + GR Y F +RVM PI D RG +I FGGRVL + PKY+NSPET ++HK Sbjct: 176 LDASGLFKRSQSGRIYCLFWKRVMTPIFDLRGNIIAFGGRVLDDSKPKYVNSPETLVYHK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 ++ L A++ + R ++ EGYMDV+++ Q GI+ AV + GT+ T D ++L+ + Sbjct: 236 SDTVFALQIAKKSASR--RFVLCEGYMDVISMHQAGIDTAVCACGTALTPDQVKLISQYA 293 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 VI YD D AG+ A R+LE + ++ + +P +DPD ++K G E F+A Sbjct: 294 EEVILSYDSDEAGQKATLRSLEL---FRNSPVKVGVLQIPGAKDPDEYIKKYGSERFKAL 350 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ F L + DL R A+ ++++ T + L + I Sbjct: 351 LDGVGNALDFRLGRLKNKYDLKQDAQRLEYVKEAVNMLAERSNPTEQEVYAGRLAEETNI 410 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLK-------------------------RTTMRILIG 456 ++ + +L S R Q + + + L+ Sbjct: 411 SKNAIMTQLADAVKRSNSKRRWAQNQARLQSGEMHQISVPYSAGGSQALGVASAEQRLLA 470 Query: 457 LLVQNPELATLVPPLENLDENKLP-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 +++ P V + ++ LP L+ + ++ L Sbjct: 471 AMLREPSYIPQVRAQLSPEKFVLPQQKELYEAFLQCQEQGIEISLSTLRPFVSEEALNEL 530 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNH 541 + + D+ + + D + Sbjct: 531 SRLAAQYSDVNCTPDDIRLYLDRIAR 556 >UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSW9_DESAD Length = 579 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 164/593 (27%), Positives = 273/593 (46%), Gaps = 42/593 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R I + R DIVD++ V+LK + CPFHNEKT SF+VNGE+ F++CFGC Sbjct: 1 MDRAAIEAIKERLDIVDIVRRYVELKPVSGRWMGLCPFHNEKTASFSVNGEEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ DF + + +EF + +E+LAA +E+ + +R+ + + Sbjct: 61 QASGDIFDFYSHINGVEFKDALEQLAAEAGVELTPGKVDPQAAKRSSERKIFMDMHEHAA 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ + L+ P AR+Y+E RG+ VI F +G + W + K + + Sbjct: 121 KYFSRMLKLPEGREARKYIEGRGMDTSVIESFGLGCSTDDWQGLEKYLVSKGYTAEQGVK 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N +GR+YDRFR R++FPI + GRVI FGGR++ N PKYLNS +T I+ KG Sbjct: 181 AGLLSQNAKGRTYDRFRARLIFPITNLSGRVIAFGGRIITNGEPKYLNSSDTPIYKKGEH 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ A R L+ EGYMDV++L Q+G + LGT+ T D ++ L + + Sbjct: 241 LYGLSTARNSIARTKRALLTEGYMDVISLHQFGYTNSCGVLGTALTPDQVKRLSGFCSKI 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 +DGD AG AA R+ E L T G + LPDGED D++++ G E F+ +++ Sbjct: 301 DLVFDGDAAGLKAALRSTEMIL---TQGVSCGVVVLPDGEDVDSILQSRGAEGFQVFLDK 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F +L + A + ++ +LR + ++ + LG+ + Sbjct: 358 ARDGLEFSLETLQKGYSPR------EVMDWAQGFLKRMTSASLRAFYLPKVASGLGVAE- 410 Query: 425 SQLERLMPKAAESGVSRPVPQLKRTTMR-------------ILIGLLVQNPELATLVPPL 471 ++L + A + V + ++R R + V++PE + Sbjct: 411 AELRSVFSGALNAPVPQQQNTVQRDQPRAATPVGAQVKDDKYFLRYAVKHPEYVVELSER 470 Query: 472 ENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA-TLEKLSMWDDIADK- 528 G L+ ++ + G LL+ A +E+ +D+ D+ Sbjct: 471 GVAQVLTSHWGKTLWSKIA----AHSGQDIIPLLDDSEKRFYAGCRMEEALSGEDLEDEW 526 Query: 529 ------------NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 ++ + TD+L R + ++E+ Sbjct: 527 RHVCRVIARRRYDMGRKKLTDALRRAQAQGDTERVNAYLKVLNDSVWRDDEQH 579 >UniRef50_B9R233 DNA primase catalytic core, N-terminal domain family n=3 Tax=Alphaproteobacteria RepID=B9R233_9RHOB Length = 661 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 180/523 (34%), Positives = 268/523 (51%), Gaps = 32/523 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++++ AR + +++ RV ++ GK ++ ACCPFH EK+PSF V+ + Sbjct: 14 RFEPRLLDEIRARLPLSEIVARRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNR 73 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCGA G+ F+ + L F E VE LA + +P A + +R +L Sbjct: 74 YKCFGCGASGDHFKFITETEGLSFPEAVERLADQAGVALP--APDPQAARREQKRASLAD 131 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + F++ P AR Y++KRGL+ E + F GFAP D + G Sbjct: 132 ICEMAAQFFEAQFAGPRGEGARAYVQKRGLTPETLREFRFGFAPDSRDALKSHLKGRGVE 191 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRV-LGNDTPKYLNSPET 236 ++I+AG+L+ D R YDRFR R+M PI+D RGRV+ FGGR L + PKYLNSPET Sbjct: 192 EPAMIEAGLLIKPDDARPSYDRFRGRLMIPIQDDRGRVVAFGGRTMLPDGQPKYLNSPET 251 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A++ + + LVVEGYMD +AL Q GI + VASLGT+ T D I Sbjct: 252 PLFHKGAMLFNAHRAREPAFKSGQALVVEGYMDAIALYQAGILHVVASLGTAFTEDQILR 311 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L+R + C+DGD AG AA RA++ P + G +F FLPDG DPD LV++ G E Sbjct: 312 LWRFAPEPMVCFDGDAAGISAAHRAIDRIFPVLKSGYSFQFNFLPDGMDPDDLVKQRGVE 371 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F A E++ L +++ + L TP+ +A L LI + + ++ + +L Sbjct: 372 GFWAEAEKSRNLFDVVWDREISVARLDTPERKAALEKRFDDLIGTIRDDRVKRRYQLDLK 431 Query: 417 NKLGIL--DDSQLERLMPKAAESGVSRPVPQLKRT---------TMRILIGLLVQNPELA 465 KL L + S+ +R K + S V L R R+++GL ++ P+L Sbjct: 432 FKLSNLFFELSRNDRKGGKKPGADPSANVIGLARERVAVSDDFGIERLVLGLCMRFPDLL 491 Query: 466 TLVPPLENLDENKLPGLGLFRELV-----NTCLSQPGLTTGQL 503 + ++ GL L EL C L T + Sbjct: 492 DR-------NFERVSGLPLVNELHIGVRDALCRIVDDLETAAI 527 >UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY76_HYPNA Length = 627 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 182/610 (29%), Positives = 283/610 (46%), Gaps = 34/610 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP F+++L AR D+I +VKL K+GK + PF EKTPSF VN +K+ + CF Sbjct: 7 RIPDGFVDELKARIRPSDVIGRKVKLTKKGKEWVGLSPFTAEKTPSFYVNDQKRIFKCFS 66 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G G+ I+F+M ++L F+E VE+LA + +P S + E R+ L + Sbjct: 67 SGMGGDVINFVMETERLSFMEAVEKLAEEAGMALP--KASPAAAEEYDHRKRLQAACEAA 124 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F++ L+ AR YLE RGL+ +++ +G+AP W L+ Sbjct: 125 ADFFEARLRSSEGAGARTYLEGRGLAASSWSKYRLGYAPDDWRRTRAHLQAEGFTDGELL 184 Query: 184 DAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHK 241 +AG++ ND+G YD FR R+MFPI D RG +I FGGR L + PKYLNS +T +FHK Sbjct: 185 EAGIIKENDKGGEPYDAFRGRLMFPIPDSRGGIIAFGGRALQPDAKPKYLNSGDTPLFHK 244 Query: 242 GRQLYGLYEAQQD--NAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 LY A++ + E L+V EGYMDV+A+ + G AVA LGT+ T + +QLL+R Sbjct: 245 STVLYRYKAAREALGHGEGGGLIVCEGYMDVIAMCEAGFGNAVAPLGTALTEEQLQLLWR 304 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 A + C+DGD+AG AA+RAL+ ALP+ GR + F+ LPDG DPD L+R G A Sbjct: 305 AGPEPVMCFDGDKAGLGAAYRALDRALPFAEPGRSVFFVLLPDGMDPDDLIRARGAGAMS 364 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++ +PLS L+ L TP+ +A L + + ++ ++L ++L Sbjct: 365 EQLAARLPLSELLWRRERDAEPLDTPERQAGLEARLIAACGHIRHPGVKSAYERDLKSRL 424 Query: 420 -----GILDDSQLERLMPKAAESGV--SRPVPQLKRTTMRIL----------IGLLVQ-- 460 + + + + G S +P +L + L++ Sbjct: 425 RDHLWQLREAKRAANYQKRPGRPGRPGSAQIPPGGEEAQELLKQGGREKIGGLRLIMSAV 484 Query: 461 -NPELATLVPPLENLDENKLPGLGLFR-ELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 NP L ++ L P R +++ + G + H + N Sbjct: 485 DNPGLLSIGAELLAQCAPAEPDAAFLRDAVLDLANDGIPIDRGTITAHLTKSGNIRAAGL 544 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIA------RERTHGLSNEE-RLEL 571 L + + L + + + R + LS +E R L Sbjct: 545 LKDYPVTPQIATNGSEAREWLIALEQFVAKRRSRDQETGSGTDSASADPTLSPQEWRRRL 604 Query: 572 WTLNQELAKK 581 + + A K Sbjct: 605 QMVAERRALK 614 >UniRef50_C7MD61 DNA primase n=6 Tax=Actinomycetales RepID=C7MD61_BRAFD Length = 658 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 283/653 (43%), Gaps = 81/653 (12%) Query: 1 MA-GRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQF 58 MA G I R ++ + R + +++ V L+ G + CPFH+EKTPSF + + Sbjct: 1 MAQGLIRRSDVDLVRERARLDEVVSEHVTLRTAGIGSMKGLCPFHDEKTPSFNIRPQLGH 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTL 116 +HCFGCG G+ I F+ + L FVE VE LA + +++ +E ++ + R+ L Sbjct: 61 WHCFGCGEGGDVISFVQKINHLSFVEAVEMLAGRYGVQLQYEDAGQGRGNRPDFGTRRRL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 +Y++ L P A R++L +RG + A F +GFAP GWD++ Sbjct: 121 LDAHAIAEEYYREQLGTPAAEVGRRFLTERGFDQDAAAHFGVGFAPEGWDSLTGVLRSRG 180 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSP 234 L +G++ +G YDRFR R+++PIRD G IGFG R L + PKYLN+P Sbjct: 181 FTEAELTASGLVSQGQRG-VYDRFRGRLVWPIRDITGNTIGFGARRLLDSDQGPKYLNTP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET I+HK LYGL A++ + +R++VVEGY DV+A G+ AVAS GT+ A+H+ Sbjct: 240 ETAIYHKSSVLYGLDIARKAISSQHRVVVVEGYTDVMAAHLAGVTTAVASCGTAFGAEHV 299 Query: 295 QLLFR-------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQL 335 +++ R V+ +DGD AG+ AA RA E ++ Q Sbjct: 300 KIVRRVMGDSNPSAGLRLNTDGRGLAGEVVFTFDGDAAGQKAALRAFEEDQRFVA---QT 356 Query: 336 RFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLA 395 G DP L +G +A +E PL F + + QVDL T +G+ +A Sbjct: 357 YVAVEASGMDPCELRIAQGDQAVRDLIETRRPLFEFAIRTAISQVDLDTVEGQVTALRMA 416 Query: 396 LPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR--- 452 P+++++ +R + L LG+ + + L + A G + RT Sbjct: 417 APVVARIRDRAMRPEYARRLSGWLGMDEATVLRAVHDAARSQGRAPQPATPARTVAEGQG 476 Query: 453 ---------------------------------ILIGLLVQNPEL------------ATL 467 + +++Q+P+L A Sbjct: 477 GAGQGSSAEDAPIPSARLADVVSPRDPVGQVETQSLAVMLQSPQLLEDEKVASLPDDAFH 536 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 VP L+ + + L L + + L Q+LE T +E ++ D Sbjct: 537 VPALQGVWDVMLAAGTLLDAVQGRLHAARYLE--QVLEIAGETVRPLIVEIANLDLPARD 594 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + L+ + + + L R + S+ ER + LA+ Sbjct: 595 EEGLRRLAHSLLDRLTELSITREYSVLKQRLQRTDPSDAER--YQDIMARLAQ 645 >UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q583_CATAD Length = 700 Score = 476 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 157/455 (34%), Positives = 229/455 (50%), Gaps = 15/455 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHAC-CPFHNEKTPSFTVNGEKQFY 59 MAG+I I+ + IVD++ A V+L+ G CPFH+EK+PSF V+ K FY Sbjct: 1 MAGQIKDEDIDRVRQAASIVDVVGAVVQLRNGGGGNLKGLCPFHDEKSPSFQVSPAKNFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ + F+M YD L F E VE LA +N+E+ + G +Q R +R L + Sbjct: 61 HCFGCGVGGDVLKFVMEYDHLSFPEAVERLAGQYNIELRYTEGGYTNQGVRSERTRLIEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ L P A AR+ L RG I +F +GFAP W+++++ G Sbjct: 121 HKAAAEYFVDQLSTPAAAHARELLAARGFDAGAIEQFHVGFAPESWESLVRHLRGRGFTD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETD 237 + ++ G+ +G DRFR R+M+PI D G VIGFGGR L + DTPKYLNSPET Sbjct: 181 KEILTGGLASEGRRGAM-DRFRNRLMWPIADLSGDVIGFGGRRLTDDPDTPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+ K LYGL A+++ + R +VVEGY DV+A G+ AVA+ GT+ +HI++L Sbjct: 240 IYKKSSVLYGLEMARREIVKQERAVVVEGYTDVMACHLAGVPTAVATCGTAFGEEHIKIL 299 Query: 298 FR--------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 R V+ +DGD AG+ AA RA L Q P G DP L Sbjct: 300 RRLLADRNQFLGVEVVFTFDGDSAGQKAAMRAY---LDEDKFVTQTFVAVEPSGMDPCDL 356 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 +G A + L F+ + + + +L +GR P+++++ LR Sbjct: 357 RLAKGDAAVRELVATRTRLFEFVIRAELAKQNLDESEGRVHALRTTAPIVAKIRDSALRN 416 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVP 444 + L LG+ + + A SG+ V Sbjct: 417 DYTRRLAGWLGLEERDVQSAVRRLLAASGIRPEVS 451 >UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD Length = 660 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 151/439 (34%), Positives = 236/439 (53%), Gaps = 9/439 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + IN ++ I +++ V LKK+G + CPFHNEKTPSF V+ K Y CFG Sbjct: 1 MINQDTINKIMDTARIEEVVGDFVALKKRGTSLIGNCPFHNEKTPSFNVSVTKGIYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+A+ F+M+++K + E ++ LA +N+EV S + ++ R++LY + + Sbjct: 61 CGKGGDAVHFIMDHEKYSYPEALKYLAQKYNIEVEETVQSPQNIEAQNARESLYIVSEYA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L A Y ++RG +++ +F +G++P WD +++ G + Sbjct: 121 AGYFANELWTGNDGRAIGLSYFKERGFREDILKKFQLGYSPDVWDALIQNAVGAGHKEEY 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 L G+ + ND+G+ YDRFR RVMFPI + GRVIGFGGR L + PKY+NSPE+DI+ Sbjct: 181 LEKTGLAIRNDKGKLYDRFRGRVMFPIHNFTGRVIGFGGRTLKTDKNVPKYVNSPESDIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYGLY A++ + + +VEGY DV+A+ Q GI VAS GTS T + I+L+ R Sbjct: 241 HKSNVLYGLYHAKKAIRDQDNCYLVEGYADVLAVHQAGIENVVASSGTSLTTEQIRLIGR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T NV YDGD AG A+ R L+ L +G ++ + PDG DPD+ + G F+ Sbjct: 301 FTENVTILYDGDAAGIKASLRGLDMILE---EGLNVKVVLFPDGHDPDSYMHHVGSGEFK 357 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +E + L+ + + P RA + + I+++P + +E + Sbjct: 358 QYIEGNRRDFILYKATILLKEAG-TDPIKRAGIIRDIIESIAKIPDDIKAAVFIRECSSL 416 Query: 419 LGILDDSQLERLMPKAAES 437 L + + L L A Sbjct: 417 LQVEERILLSELNKMRAAK 435 >UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUG2_9FIRM Length = 600 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 166/606 (27%), Positives = 273/606 (45%), Gaps = 50/606 (8%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN++L+R DIVD+I + LKK+G N+ ACCPFH+EKTPSF VN EKQ YHCFGCG GN Sbjct: 2 INEVLSRNDIVDVIGSYASLKKKGSNYEACCPFHHEKTPSFKVNREKQMYHCFGCGVGGN 61 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M Y+ L F E VE LA +++P ++ S + + L ++ ++ Sbjct: 62 VFTFVMEYENLNFPEAVERLAERAGIQLPEKSMSAQERSREQYKIALKEMNKTAAAYFHY 121 Query: 130 SLQQPV-ATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 L+ A +Y RGL+ E I RFA+G+A D++ + + L ++G+ Sbjct: 122 ILKHGQRGEKAYEYFRDTRGLTDETINRFALGYADIYRDDLYRYLKNKGYTDEQLKNSGL 181 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + ++ D+F R M PI D G+VI FGGRVLG+ PKY+N+ +T +F K L+ Sbjct: 182 VDITEKDGGVDKFWNRAMIPILDINGKVIAFGGRVLGDGKPKYINTSDTAVFDKSHTLFA 241 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 + A++ + + EGYMDV+++ Q G + AVASLGT+ T H ++ R + V Sbjct: 242 MNIARRSRRKG--FICCEGYMDVISMHQAGFDNAVASLGTAFTFGHANIIKRYADEVYLA 299 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG A + + G R + + +DPD +R G EAFE R+++A Sbjct: 300 YDSDGAGVAATKKVIAILREV---GVGARVINMRPYKDPDEFIRNLGSEAFEDRIKKAES 356 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 FL + D S P R + IS + R + I D+ Sbjct: 357 GMMFLARIYSEEYDQSDPGERTKFQNQVAKEISYIEDPLERNNYIDAIARAYVINRDALA 416 Query: 428 ERL-------------------------------MPKAAESGVSRPVPQLKRTTMRILIG 456 E++ S + + T R+L+ Sbjct: 417 EKVHDYGVAGTPKPDVVEREERRLEEQTTNPDSGTGSGTASHGRQGRDVGENKTARLLLT 476 Query: 457 LLVQNPELATLVPPLENLDENKLPGLG--LFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 LV P L + + + +E+ PG+ + +L + Q + ++ ++ Sbjct: 477 WLVNEPSLFEKLDGVIS-EEDFDPGVFRTVAEKLFSQYREQHKVEPAIVVNTFQDVEEQR 535 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + D D + E+ + ++ + + +A + H S + ++ L Sbjct: 536 LVASMLQTDLSID--MTEEEISGAITDVVKKIK-------LASIKKHLESENDITKVQQL 586 Query: 575 NQELAK 580 ++ K Sbjct: 587 IKDRKK 592 >UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5_LACCB Length = 595 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 165/600 (27%), Positives = 269/600 (44%), Gaps = 29/600 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP ++ +L +I D I V+L+K G+N CPFH E TPSF+VN KQ +HCF Sbjct: 1 MIPEATVDKVLKAVNIADYIGQYVQLRKTGQNLFGLCPFHEEHTPSFSVNEPKQIFHCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN F+M+YD F E V+++A + + + G +Q + L D Sbjct: 61 CGRGGNVFKFVMDYDNATFPEAVKKVADFAGMPLDVQVGHAAPVDPEISKQQ-HILQDTA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + F+ + +A YL KRGL+ + I F +G+AP + ++ + Q Sbjct: 120 DLFHHILMNTEKGQTALDYLHKRGLTDDTIEAFQLGYAPEERNLLVAFLNNRKVDYQDQR 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHK 241 +G+ V + +G+ +DRF +RVMFP+ D G+VIGF GR+L D KYLNSPET +F+K Sbjct: 180 ASGLFVEDQEGKLFDRFNDRVMFPLTDSHGQVIGFSGRILSKDKTQAKYLNSPETKLFNK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L+ L+ A+ D ++ EGYMDV+A Q G+ +AS+GTS T + + ++ + Sbjct: 240 RDVLFNLHRAKADFGRDGGPILFEGYMDVIAAYQAGVKTGIASMGTSLTTEQVDIISHLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + CYDGD G+ A RA+ + Q + LPDG DPD +R G EAF+A+ Sbjct: 300 KRLTVCYDGDEPGQKAIERAVAMLADHPR--LQTDVVVLPDGMDPDEFIRARGAEAFQAQ 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ + +AF+ L VD++ + AL I ++ R ++L + G+ Sbjct: 358 VKSVLTPTAFMLQFLARGVDMNNDQAKLTYLNAALKTIGKISNPVARAVYVKQLADTTGV 417 Query: 422 LDDSQLERL---------MPKAAESGVSRPVPQLKR------TTMRILIGLLVQNPELAT 466 + + + L A S + PV Q R R L+ + + +L Sbjct: 418 PESALNQSLPAPQQAVPQQSSAPVSYQTAPVNQPVRPIDRYTAAQRQLLYYVWHD-DLVM 476 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 LF ++ QP L+ + ++M Sbjct: 477 QRLKNAAFTFPAPHFQTLFTGWLDFLHEQPDGELAGFLDRVDPDLSG-VAASVAMQVLPE 535 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL-----ELWTLNQELAKK 581 ++ S +E Q A L ++++L + L + L ++ Sbjct: 536 ATEATIDELIQTITS--ASTVERLQAIKQAITEAQRLGDKQKLGELTVQYVNLMKLLKQQ 593 >UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVF2_SYNAS Length = 594 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 170/592 (28%), Positives = 292/592 (49%), Gaps = 21/592 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 + G P I ++ +R DIV+LI + LKK GKNF CPFHNEKTPSFTVN EKQ Y+ Sbjct: 2 LKGDHPGDKIAEIKSRIDIVELISEYISLKKAGKNFLGLCPFHNEKTPSFTVNREKQMYY 61 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ FLM F +T++ LA + +P + G + + + R+ + Q+ Sbjct: 62 CFGCGEKGDVFAFLMRLHNTTFPDTLKLLARRTGVILPTSSFRGDGKSQLNAREQIIQIN 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y+ +L P +A YL++RGL I F++G+A GW + ++ + Sbjct: 122 QIAAAYYKDNLFSPGGKAASSYLKERGLKESTIEVFSLGYALDGWRYLRNHLERKKQSLK 181 Query: 181 SLIDAGMLVTNDQ--GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +AG++V D YDRFR R+MFP++D GR+I FGGR+LG+ PKYLNSPE+ Sbjct: 182 MAGEAGLIVAKDDRPDVLYDRFRNRLMFPVKDVDGRIIAFGGRILGDGEPKYLNSPESPA 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + KGRQLYGL A+++ +++VEGY D++ L GI VA+LGT+ T DH+ L+ Sbjct: 242 YIKGRQLYGLNLAKEEIRRCGYVILVEGYFDLIVLWNAGIKNVVATLGTALTKDHVALIR 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ V +D D AG+ A R++E ++ R + LP+G DPD VR+ G EA Sbjct: 302 RYTDQVAITFDSDEAGKKALARSVEM---FIAAHMDARAVVLPEGLDPDDFVRRYGGEAL 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + +E A + + + + + + + + R + A I+ + R + + K Sbjct: 359 KRMVEGAPSIVDYYIENAIGRGN--SFEERGGAAARAAAFITGIQDVIDRNLFIKRVAEK 416 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTT------MRILIGLLVQNPELATLVPPLE 472 LGI D + + + + + +++ +I L+++ P++ + + Sbjct: 417 LGIDQDILKKEVQRRLRSNARKEFLTPVQQREAAYSGLELNMIHLMMEYPDVIPSILSSK 476 Query: 473 NLDENKLPGLGLFREL-VNTCLSQP--GLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 ++ L L + ++ +++ ++ + +L + K Sbjct: 477 AMEYFINRDLRLIGQSWIDYAVNETVNPGDAVSFIQKLDNPDIEDIFLRLFVKGSPFQKE 536 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + +D + + + + + + R S ++ L +EL K+ Sbjct: 537 QLDSITSDMIRQVKRRWYKEQHKNIKNRLLNAQASGDQ-----ALGRELLKE 583 >UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9FIRM Length = 638 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 150/423 (35%), Positives = 221/423 (52%), Gaps = 7/423 (1%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 P I ++ + DIVD+I VKL+K+G N+ CPFHNEK+PSF+V+ KQ Y+CFGCG Sbjct: 4 PDEVIEEVRMKNDIVDVISGYVKLQKKGANYFGLCPFHNEKSPSFSVSPGKQMYYCFGCG 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN + F+M Y+ F E + LA + +P S ++ + R L ++ Sbjct: 64 AGGNVLTFVMEYENYTFQEALAHLADRAGVSLPKMEYSKEAREQAEHRARLLEVNKLAAN 123 Query: 126 FYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ L+QP +YL ++RGL + I F +G++ D++ + G L D Sbjct: 124 YFYYQLKQPQGKLGYEYLHDRRGLLDDTIVHFGLGYSNKTSDDLYRFLKGKGYEDSFLKD 183 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++ ++G D+F RVMFPI D RVIGFGGRV+G+ PKYLNSPET +F K R Sbjct: 184 TGLVTLEERGG-RDKFWNRVMFPIMDVNNRVIGFGGRVMGDGEPKYLNSPETKLFDKSRN 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ LL+ EGY+DV++L Q G AVASLGT+ T+ H +L R T+ V Sbjct: 243 LYGLNYARTS--REGYLLICEGYLDVISLHQAGFTNAVASLGTAFTSQHANVLKRYTDQV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I YD D AG AA RA+ G ++ + + +DPD ++ G +AF R+++ Sbjct: 301 ILTYDSDGAGIKAALRAIPILKEV---GMSIKVLNMKPHKDPDEFIKNMGADAFRQRIKE 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F + L + P+ + R + Q R Q + + I D Sbjct: 358 AKNSFLFEVDVLRQGYQMDDPEQKTRFYQETAKKLLQFGEALERENYLQAVAREQMIPAD 417 Query: 425 SQL 427 Sbjct: 418 ELR 420 >UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE Length = 730 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 144/454 (31%), Positives = 232/454 (51%), Gaps = 11/454 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I +V I+ +L IVD++ V L+K+G N+ CPFHNEKTPSF+V+ K CF Sbjct: 1 MIDQVTIDRILDAAQIVDVVSEFVTLRKRGVNYVGLCPFHNEKTPSFSVSPAKGLCKCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN++ F+M ++++ + E ++ LA +N+E+ + + + R++++ + + Sbjct: 61 CGKGGNSVHFIMEHEQMSYYEALKYLAKKYNIEIKERELTNEEKQAQTTRESMFIVNNFA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++Q L+ V Y +RG ++I +F +G+ D + + ++ Sbjct: 121 RDYFQNILKNHVDGRSIGLAYFRQRGFRDDIIEKFQLGYCTESHDAMSQEALRKGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ D R DRF RV+FP+ G+V+ FGGRVL T KY+NSPE++ Sbjct: 181 LVKTGICYETDDHRLRDRFWGRVIFPVHTLSGKVVAFGGRVLSTATKGVKVKYVNSPESE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK +LYG+Y A+Q +R +VEGY DV+++ Q GI VAS GT+ T I+L+ Sbjct: 241 IYHKSNELYGIYFAKQAIVRQDRCFLVEGYTDVISMHQSGIENVVASSGTALTPGQIRLI 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK E Sbjct: 301 HRFTNNITVLYDGDVAGIKASIRGIDMLLE---EGMNIKVCLLPDGDDPDSFARKHNSEE 357 Query: 358 FEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+A + E F + LM P RA L + + IS +P +R +E Sbjct: 358 FQAFIHEHEKDFIRFKTDLLMEDAG-RDPIKRAELISNIVRSISVIPEAIIRDVYIKECS 416 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT 450 L I + + + P ++ Sbjct: 417 QHLRIEEKLLVAEVAKLREAQAEKANRPSYNHSS 450 >UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_THEEB Length = 694 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 188/582 (32%), Positives = 284/582 (48%), Gaps = 40/582 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + +IVD++ V L+K+G+ + CCPFH EKTPSFTV+ K FY+CFG Sbjct: 5 RLHPDTIEAVRQAVNIVDVVAEHVVLRKRGREYVGCCPFHEEKTPSFTVSPLKGFYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS--QIERHQRQTLYQLMD 121 CGA GNAI FLM K F E V +LA H + V Q ++ LY+++ Sbjct: 65 CGAGGNAIKFLMELQKRSFAEVVLDLAQRHQIPVRTLDSEQKQALQARLSLQEQLYEILA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 +FY+ +L+QP+ +A+ YL+ +R L E I +F +G+AP GW + Sbjct: 125 IATSFYEHALRQPIGQAAQDYLQRQRHLKEETIQQFRLGYAPAGWQVLYTYLVEQKGYPA 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + AG+++ G R YDRFR+R++ PI D +GRV+GFGGR L N+ PKYLNSPET I Sbjct: 185 ALVEQAGLIMPQRTGDRYYDRFRDRLIIPIMDTQGRVVGFGGRTLSNEEPKYLNSPETPI 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+KG+ L+GL +A+Q A+ ++ +VVEGY DV+AL Q G VASLGT+ + I+LL Sbjct: 245 FNKGQLLFGLDKARQAIAQTDQAIVVEGYFDVMALHQAGFPQTVASLGTALSQAQIKLLL 304 Query: 299 RAT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLV----- 350 R T +I +D D+AG+ AA RA+ A + G +LR + LP G+D Sbjct: 305 RYTESKQIILNFDADKAGQRAADRAIGEAADLVYRGDLRLRILTLPAGKDAADFFTVDEA 364 Query: 351 -RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + A++ ++QA + +L+ Q DL D + S L++++P TLR Sbjct: 365 TLAARRAAYQTLLDQAPLWLDWQIQTLVQQYDLEQGDQFQQASQALSELLAKLPNATLRS 424 Query: 410 YLRQELGNKLGILDDSQ---LERLMPKAAE--------SGVSRPVP-QLKRTTMRILIGL 457 + LG D LE + + RP L++ L+ L Sbjct: 425 HYIHHCAELLGRHDSRLTLHLEEALRQQVRGYRWPGRSQKWQRPADYNLRQAAEEQLLRL 484 Query: 458 LVQNPELATLVPPLENLDENKLPGLG---LFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + E L+ + + L+R+++ EH G + Sbjct: 485 YLHRGEYRPLIRQTLQARDIEFSLSHHRWLWRQILAVEE-----------EHCGGRPDPD 533 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIA 556 + + T D ++H+FD L E LI Sbjct: 534 DPYNAEWPLHSPTEAGTQLTDLDLVSHLFDRLDEAEDASLIT 575 >UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW47_9BACT Length = 599 Score = 473 bits (1217), Expect = e-132, Method: Composition-based stats. Identities = 161/592 (27%), Positives = 278/592 (46%), Gaps = 15/592 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M IP+ I ++ DIV +I ++LK+ GK F CPFH+EKTPSF VN +K+ + Sbjct: 1 MVHFIPQEKIAEIQFAADIVQIISEYIQLKQSGKAFIGLCPFHSEKTPSFFVNPDKKLFK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G F+M + ++FVE V+ +A+ +++ + + + + ++ LY+ Sbjct: 61 CFGCGEGGTVFQFVMKQEGMDFVEAVKLVASKSRVDLT-QIYAKETSLSSSKKTHLYETT 119 Query: 121 DGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 TFYQ+ L AR YL KR ++ I F IG+AP WD+++K G + Sbjct: 120 RFAATFYQKMLLDAMKGKKARDYLLKRKINDHSIKNFCIGYAPAEWDSLVKMCKGGNVSM 179 Query: 180 QSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L AG+++ ++ YDRFR+R++FPI D R +V+GFGGR L + PKYLNSPET + Sbjct: 180 YQLQQAGLIIQKKERDSYYDRFRDRLIFPILDIRKQVVGFGGRALDDSLPKYLNSPETVL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K LYG+ A+ + +++++EGY DV+ Q+GI +AVA LGT+ + H++ L Sbjct: 240 FNKSNILYGIDIAKSAILKKQKVILMEGYTDVIMAHQHGIEWAVAVLGTAISKQHLRSLR 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI D D AG+ ++ R L+ ++ + ++ LP G DP + EG E F Sbjct: 300 QYCSRVILLLDADSAGQKSSDRNLDI---FIEEEFDVKIAQLPKGYDPCDFLLAEGPEKF 356 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++ A F + D+ST G+A L + P R L + + + Sbjct: 357 LSYIDSAKDFFHFKIEFAATKWDMSTVHGKANALNNVLATAMKTPDAIKRNLLIKLISEE 416 Query: 419 LGILDDSQ------LERLMPKAAESGVSRPVPQLKRTTM--RILIGLLVQNPELATLVPP 470 + I + + ++R + A + + +L ++M R ++ L++ L + Sbjct: 417 MSIDEAALWSHIKNVKRPLSVPANNNNQKTKQRLDASSMAEREILYLMLSCNSLIPRIIN 476 Query: 471 LENLDENKLPG-LGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 + +E L + +V + +L L + + D Sbjct: 477 EKIPEEFDNKDFLEIAGRIVEIYQKNKAVKEEDVLHSIGEARLNKLLVDIVTTREFQDMT 536 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + S+ + ++ L +E KK Sbjct: 537 DYRDRLEACILFFKRRNRRKDIHITKKKMLETARSSHKEEDIVMLLEEYHKK 588 >UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY28_ALIAD Length = 601 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 178/580 (30%), Positives = 270/580 (46%), Gaps = 32/580 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P FI+ L + DIV++I V L+K G+++ CPFHNE+TPSF+V+ E+Q YHCFGC Sbjct: 3 VPETFIDTLRQKVDIVEVISEYVPLRKSGRSYVGLCPFHNERTPSFSVSPERQVYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G FLM+ + + F ETV LA + +P + + R +R Q D Sbjct: 63 GAGGTVFRFLMDIEGISFAETVTLLAERCGIPLPDSLHAPAPRSPRLER--YRQAHDLAA 120 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L A YL RG+S +A F +G+APP ++ + + LI Sbjct: 121 KAFNHILMNTDAGVQALHYLLSRGISRTTMATFQLGYAPPSGRAMMSFLQQKGFSAEELI 180 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 G+ V + G DRFR RV+ PI D+RG+V+ FG R L +D PKYLNSPE ++FHKG Sbjct: 181 ACGLAV-DLGGELVDRFRGRVIIPIADRRGQVVAFGARALDDDAKPKYLNSPEYELFHKG 239 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ ++ A++ R L++EGYMDV+A+AQ GI AVA+LGTS T + QLL + Sbjct: 240 RMLFNVHRARKAIRRERRALLLEGYMDVLAVAQAGIECAVATLGTSLTEEQAQLLKADCD 299 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YDGD AGR A RA+E G + LPDG DPD +R G AFE + Sbjct: 300 KVVIAYDGDEAGRKATVRAIEVL---EQAGVTPVVLRLPDGMDPDEYIRAHGARAFERML 356 Query: 363 EQAMP-LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ FL + + + +P GR L L+++ + Y + L + + Sbjct: 357 SESTWTAVQFLIEDMRARAEWVSPAGRTEFLRQVLRLLAERASPVEQEYQLRNLSQEFNL 416 Query: 422 LDDSQLERLM----PKAAESGVSRPVPQLKRTT----------MRILIGLLVQNPELATL 467 ++ E + P S V + +RIL L E A Sbjct: 417 SVETLKEEMRGFAKPLRRRSPPREEVTPWVNSPRAAKGKDQVSLRILQAALFSQ-EAAEY 475 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 + + L + + L QPG ++ L +L+ + Sbjct: 476 LMEKGVTELAHPLHTALLSHVYSWRLEQPGQPPSAFIDRLEDEE----LVRLASSLLFDE 531 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 + +++ L ++EL +E+ + E Sbjct: 532 PPEITVELVE--DYLRALELFRLEQEL--KEKVRAWNEAE 567 >UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_CHLPD Length = 636 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 188/620 (30%), Positives = 278/620 (44%), Gaps = 48/620 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ I+D+ TDIVDLI VKL G+N+ A PF EKTPSF V+ +KQ + CF Sbjct: 6 MIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFS 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN F+M +K+ F E VE LA +++ + +I+ + ++ + Sbjct: 66 TGKGGNVYTFVMEMEKISFPEAVELLAKRTGIDISRF--TKQQKIQNEENESQTGTLRWA 123 Query: 124 NTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + +L+ P YL E RGLS +I +F IG+AP WDN++ +L Sbjct: 124 ARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIGYAPDQWDNLINEAKQASIPLANL 183 Query: 183 IDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIF 239 + G+ ++G YD FR RV+FPI G+V GFGGR L +D TPKYLNSPE +F Sbjct: 184 TELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPENPLF 243 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + LYGL+ A+ + L+VEGYMDV+AL Q GI AVAS GTS T ++L R Sbjct: 244 EKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQR 303 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN V+ YD D AG+ + ++T +T+G + LP G+DPD+ V++ GKE F Sbjct: 304 YTNRVLFVYDADPAGKKSMMAGIDTL---VTEGITPFVLELPSGDDPDSFVQRAGKEEFL 360 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E F + + D +A+ I+ +P + QEL K Sbjct: 361 RYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHTIALIPDRIRQELYLQELSEK 420 Query: 419 LGILDDSQLERLMPKAA----------ESGVSRPVPQLKR---TTMRILIGLLVQ----- 460 LGI S E L+ ++ S +RP P ++ R + L++ Sbjct: 421 LGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG 480 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQL-----LEHYRGTNNAAT 515 N L L +F L+ S G L + + Sbjct: 481 NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNL 540 Query: 516 LEKLS-------MWDDIADKNIAE-----QTFTDSLNHMFDSLLELRQEELIARERTHGL 563 L W + D N +F D+ + L ++E L + R Sbjct: 541 ASGLLLDQPVSKKWHEQTDLNAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNEND 600 Query: 564 SNEERLELW---TLNQELAK 580 + E L TL++++ K Sbjct: 601 AALETELLREKITLDRKIRK 620 >UniRef50_B0PFC1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFC1_9FIRM Length = 586 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 154/544 (28%), Positives = 247/544 (45%), Gaps = 35/544 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP +F+ +L +DI ++ + V+LK++G+ + CPFH+EK+PSFTV + Q ++CFG Sbjct: 1 MIPDLFLQELKNNSDIEQVVSSYVRLKRRGRIANGLCPFHSEKSPSFTVYPDNQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I F+ + LE+VE V LA + +P E + + +Y L L Sbjct: 61 CGAGGDVITFIRKIENLEYVEAVRFLAQRAGMAMPEEVADDGA---AKMKMRIYALNRAL 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L+ P YL +RGL++ I F +G+AP WD +K L+ Sbjct: 118 ARHFHDCLKSPAGKPGLDYLHERGLTNRTITHFGLGYAPEAWDGAVKFLRSQGYRDDELL 177 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 A + G YD+FR RV+FPI D RG V+GFGGR++G+ PKYLNS +T +F K Sbjct: 178 AAAVAARGRSGGLYDQFRGRVIFPIIDLRGNVVGFGGRIMGDARGPKYLNSSDTPVFKKS 237 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ L A+ + L++ EGYMDV+A+ Q G + AVA+LGT+ T + +L+ + Sbjct: 238 RNLFALNFAKAS--KRGGLILCEGYMDVIAMHQAGFDNAVATLGTALTPEQSRLIAQYAQ 295 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YD D G+ A RA+ G ++R + + +DPD ++K G E F + Sbjct: 296 EVVLSYDSDGPGQAATKRAVSLL---GETGVKIRILSMTGAKDPDEYIKKFGAERFSLLL 352 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 A + + L + D T +G+ L+ VP R + +L + Sbjct: 353 SGASNATEYEIEKLRRKYDCDTAEGKVAFLREFAALMVSVPNAVERDVYVSKTAAELEVS 412 Query: 423 DDSQLERLMPKAAESGVSR--------------PVPQLKRTTMRI-----------LIGL 457 + +L + + R P Q +R R ++ + Sbjct: 413 KSAIETQLKYEQKRAAKRRRGDASQLRVYSEAGPAEQ-RRDPQRARYIRYALAEDKILAI 471 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 L++NP+ LD +++ L+ LL A Sbjct: 472 LMKNPDYYEHAAQRIGLDGFVTDRNRALAKVLFERLAAGQSVELPLLSAQLDEEQMAAAA 531 Query: 518 KLSM 521 L Sbjct: 532 GLLN 535 >UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWU3_SYNWW Length = 593 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 166/545 (30%), Positives = 266/545 (48%), Gaps = 21/545 (3%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 + ++L R DIV+++ V L ++G + CPFH EKT SF V +K ++CFGC Sbjct: 5 DDQVLEEILNRLDIVEIVSESVNLSRKGNRYWGLCPFHQEKTASFCVTPDKNMFYCFGCH 64 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G+ F+M D LEF E +E LA +E+ S + R+ + ++ Sbjct: 65 AGGDIFSFVMKRDGLEFREAMEYLAGKAGIELV----KSRSGKQTDHRKPVIEVNQAAVE 120 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 FYQQ L + AR+YL +RGL I ++ +G+AP GW + + +++ L + Sbjct: 121 FYQQVLAGKLGQEAREYLRRRGLEAATIKKYQLGYAPDGWTRLEEHLLKKGYSQEYLKLS 180 Query: 186 GMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++ ++ YD R R++FPI G ++G GGRVL + PKYLN+PET++F K + Sbjct: 181 GLIKRSENRNNFYDLLRRRLVFPIMHYNGDIVGLGGRVLDDSLPKYLNTPETELFSKRKV 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL++A+ + N+ ++VEGYMD + L Q GIN VA++GT+ T++ +LL R V Sbjct: 241 LYGLFQARDSIRQANKAIIVEGYMDCIKLQQLGINNVVATMGTALTSEQARLLQRYCEKV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-E 363 + YDGD AG+ RALE +G + + LP GEDPD + K GKE F + Sbjct: 301 LLLYDGDEAGQRETIRALEIL---GNEGLKASVVSLPMGEDPDDYIEKYGKEEFLRYIQN 357 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 + F N + + + + R I Q+ E + Y + L KL I + Sbjct: 358 NKLSNIEFKINRYLSREKELNLESQIRTINYLRKDIGQLNSELEKDYYIKILARKLKIEE 417 Query: 424 DSQLERLMPKAAE-SGVSRPVPQLKRTTMRIL--------IGLLVQNPELATLVPP---L 471 + L + + SG+ R ++ R ++ + + + + PEL + L Sbjct: 418 NIVYRELKKRERDISGIKRNKSKIIRDNIKYVNYGINEKILAAMFKKPELFEYIKNRIGL 477 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 E L+E L L E + S L LL + +G +A L M ++ + Sbjct: 478 EFLEERDLRALAGIYEKLKDNDSDDHLERLGLLANQQGFGSAFARLALLMEEESLPGEME 537 Query: 532 EQTFT 536 + F Sbjct: 538 IKRFI 542 >UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_ENTFA Length = 628 Score = 471 bits (1211), Expect = e-131, Method: Composition-based stats. Identities = 170/625 (27%), Positives = 278/625 (44%), Gaps = 51/625 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP+ I ++ RT+IVD+I V+LKK GKN+ CPFH E++PSF+V +KQ +H Sbjct: 1 MAQRIPQEVIEEVRHRTNIVDIIGQYVQLKKSGKNYMGLCPFHEERSPSFSVAEDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS---QIERHQRQTLY 117 CFGCG G +FL + + F E+V+ +A + +L V F+ E QR++L Sbjct: 61 CFGCGKGGTVFNFLQEIEGISFPESVKRVADLEHLSVDFDWSEPREVADTPENQQRRSLL 120 Query: 118 QLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 QL Y L + A YL +RGL+ E+I F IGFAP D + + F Sbjct: 121 QLHSKAAELYHHILVNTKIGEPALNYLLERGLTQELIETFQIGFAPQKRDFLSQVFKNEQ 180 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL------GNDTPKY 230 + +G+ V D G DRF +R+MFPI D +G VI F GR+L G++ PKY Sbjct: 181 LDETLFEPSGLFVQRDNGTFLDRFYQRIMFPINDPQGNVIAFSGRLLKTADFPGDEMPKY 240 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 LNSPET +F+K L+ A+++ + N +L+ EG+MDV+A Q G+ VAS+GTS T Sbjct: 241 LNSPETTLFNKRETLFNFDRARKEIRKENTVLLFEGFMDVIAAWQSGVKSGVASMGTSLT 300 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 + I+ L R V+ CYDGD AG A RA++ L + +P+ DPD V Sbjct: 301 NEQIRRLERVAKEVVICYDGDNAGVQATNRAIQLLQE--NSHFDLSIVSIPEKLDPDEYV 358 Query: 351 RKEGKEAFEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 RK G EAF+ + +F N +++ + L ++ V R Sbjct: 359 RKYGAEAFQNLANHGRETVFSFKMNYHRLTRNMNNEKEQLDYVNELLRELTNVQSPLERD 418 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK---------------------- 447 ++ + + S E+ E + + + Sbjct: 419 RYLNQIAQEFQLSVHSLEEQFNQLKQEQRSVQRQERQQFYQDEMMPPPMEEPVFEENHVQ 478 Query: 448 --------RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLT 499 + R L+ L+ + + L + L+ L + Sbjct: 479 NKLPLTQVQKAERSLLFRLMNEQGVRQTIQQLPDFSFAHDEYQELYFLLESYATLHQSFD 538 Query: 500 TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD-----SLNHMFDSLLELRQEEL 554 + + +++ + + +E+ D +L+ + +++ + + ++ Sbjct: 539 IADFINFLQDNQTKQLAIEIAYQN--LSEESSEREVADLLHVIALSSIAEAIEQKKIQQQ 596 Query: 555 IARER-THGLSNEERLELWTLNQEL 578 A+ L E +E+ L ++L Sbjct: 597 EAKRVGNQQLEAELTMEIIQLARQL 621 >UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8V4_HAHCH Length = 600 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 200/602 (33%), Positives = 312/602 (51%), Gaps = 37/602 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQ--F 58 MA IP+ F++DLL+R D+ LI RV LKK G + CPFH+EK+PSF V E Sbjct: 1 MASLIPQAFVDDLLSRVDLASLIAERVNLKKSGATYQGRCPFHDEKSPSFHVYNENHPAH 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHC+GCGAHG+AI+F+ + L F E VE+LA +EVP + ++ + Q ++LY Sbjct: 61 YHCYGCGAHGDAINFIKETEHLSFNEAVEQLAKRCGVEVPRD---KVAEQKVSQNKSLYD 117 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 ++ ++Q+L P A++YL++RG+S E+ + IGFAP + + Sbjct: 118 ASSHADSAFRQALGNHPQRGVAQEYLKRRGISPEMADLYGIGFAPAQRQFL------SGT 171 Query: 178 NRQSLIDAG----MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNS 233 + +SL+ A +++ +Q R +D F+ R+MFPIRD RGR I FGGR LGND KY+NS Sbjct: 172 SDRSLVKALSTLRLVIEKEQDR-FDMFQNRLMFPIRDTRGRTIAFGGRTLGNDRSKYINS 230 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PE+ IFHK LYGL+EA++ + + +L+VVEGY+DV++LAQ+G+ AVA++GT+T D+ Sbjct: 231 PESPIFHKSNVLYGLWEARKQSRKLEQLIVVEGYLDVISLAQFGVVNAVAAMGTATNEDN 290 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 + L + +++ C+DGD+AG AA +AL LP DG ++ F+ LP+GEDPDT VR E Sbjct: 291 LSHLLNTSQDIVFCFDGDKAGLAAADKALNNLLPMFQDGYKVSFLILPEGEDPDTFVRNE 350 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G +AF R+ A PLS + F ++ +DLS + + LST A + + L+ L Q Sbjct: 351 GADAFRERIANATPLSEYFFQAMSRGLDLSIAENKGILSTQARAALKVINAPVLKDALYQ 410 Query: 414 ELGNKL----------------GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGL 457 L D + + + P+P R R +GL Sbjct: 411 RLNELTRSSRWGDRQGKHGGDWKKGDWKGKKGFSFQNRDEPREEPIPVPNRIAARACLGL 470 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA-TL 516 V+ P A + N + + L + L + + LL + Sbjct: 471 YVK-PSWAKEISNTLNYEITQDDERAL-TYFLEWLLKEKIESAEDLLYRLTVDPHQQRRF 528 Query: 517 EKL-SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 + L + + I E +SL + + +++ + E + T++ Sbjct: 529 KNLFNSLEHIFGTEEIEAGAQESLLVLKRKYFDRSFDKIHQDLSRDPKNKELHEKFRTMS 588 Query: 576 QE 577 E Sbjct: 589 SE 590 >UniRef50_C4L400 DNA primase n=2 Tax=Exiguobacterium RepID=C4L400_EXISA Length = 603 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 167/581 (28%), Positives = 271/581 (46%), Gaps = 26/581 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I ++ TDIV+LI RV+LKKQG CPFH+E +PSF+V+ EK YHCFG Sbjct: 3 RIPDEVIAEVKQATDIVELIGERVELKKQGHRLVGLCPFHSENSPSFSVSPEKGMYHCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN F+M + L F ETVE LA N+ V G E+ R+ + + Sbjct: 63 CGAGGNVFTFVMETEGLSFPETVERLATRANISVDGIQGDEELTREQVWRKQMRDAHRLV 122 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y + L + YL R L+ E IA++ IGFAP ++ + + + Sbjct: 123 ADLYHEVLMKTEAGEVGLTYLRNRDLAEETIAQYKIGFAPDQRRFTVELLERRGFDLEVM 182 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 ++AG++ + G +DRF RV+FPI D+ G ++GF GR + + PKY+N+ ET +F+K Sbjct: 183 VEAGLISKSKSGEYFDRFEGRVVFPIADRDGTIVGFSGRAIDDRQPKYVNTAETPLFNKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 L+G +A+ + R+ +VEG +DV+ +AQ G VASLGT+ + H + L R Sbjct: 243 ELLFGFSQARATMRKKKRVFLVEGNVDVLQVAQAGTQEVVASLGTAFSPQHARALSRIVE 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 VI CYDGD AG++A + + ++ + LP+ DPD +R+ G ++ + Sbjct: 303 EVIICYDGDHAGQEATQKVIRLL---EASPLDVQVLPLPEKTDPDDYIRQHGATHWQQFI 359 Query: 363 E-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 E + + + F+ +L+ R R L I + R ++L ++ I Sbjct: 360 ESEQLSVLDFMNRMYRRGKNLNREGERIRFIESMLEEIGKTNDSIRRDLYVKKLSDEFEI 419 Query: 422 LDDSQLERL-MPKAAESGVSR---PVPQLKRT-----------TMRILIGLLVQNPELAT 466 ++ R+ P ++ES +R PV +++ + L+ ++ PE Sbjct: 420 PLETLRSRIPRPTSSESTPTRAMEPVEPVRKRSSKAGEPRWMKAEKYLLRAMLTGPEQVR 479 Query: 467 LVPPLENL----DENKLPGLGLFRELVNTCLSQP-GLTTGQLLEHYRGTNNAATLEKLSM 521 V L + +++ G L+ + T T +E Y + + Sbjct: 480 FVRDRLGLRYQDETHRMLGSALYEIVSETMTQDEFDQITLPFMERYCDQR-PDYAMRFAE 538 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG 562 +A + + D + +S E RQ E RE Sbjct: 539 IRLMAGPDELSEDVLDEYIRVINSYEEQRQIERAKREIAQD 579 >UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QT03_9SPHI Length = 703 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 158/465 (33%), Positives = 246/465 (52%), Gaps = 24/465 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + + DI+++I+ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFG Sbjct: 2 RIPEETVERIRQSADILEVINDFVSLKKRGSNYIACCPFHNEKTPSFNVNPTRQIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+++ F+M+ + + + E + LA + +E+ + + + +++R++L +++ Sbjct: 62 CGKAGDSVRFIMDIENIGYGEALRYLAKKYGIEIEEQEQTPEDLLRQNERESLLIVLNFA 121 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 TF+Q++L+ Y +RG ++ I F +G+ WD +LK +R Sbjct: 122 KTFFQETLKTTDEGKSIGLSYFRERGFTNPTIDAFELGYTLDQWDALLKEGIRRGYSRDL 181 Query: 182 LIDAGMLVTND-----QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-------PK 229 L AG+++ + + +DRFR RVMFPI + GRVI FG R+L D PK Sbjct: 182 LEKAGLILVKEGSAGGDSKVFDRFRGRVMFPIHNVSGRVIAFGARILKTDKNQPGGAAPK 241 Query: 230 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 YLNSPET ++HK + LYG+Y+A+Q + + + EGY DV++L Q GI VAS GTS Sbjct: 242 YLNSPETSVYHKSQVLYGIYQAKQAIRQEDVCYLTEGYTDVISLHQAGIKNVVASSGTSL 301 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 T + I+L+ R T NV YDGD AG AA R L+ L + R + LPDGEDPD+ Sbjct: 302 TTEQIRLISRFTPNVTILYDGDAAGIKAALRGLDMVLEEGLNLRL---LLLPDGEDPDSY 358 Query: 350 VRKEGKEAFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 V K G +AF+ + E + F + + + P RA + I+++P R Sbjct: 359 VHKIGADAFKTYIREHSQDFIDFKASRWLTEAG-DNPLKRAEGISDVCVSITKIPDALKR 417 Query: 409 IYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI 453 L Q + + + S + + + + Q K+ R Sbjct: 418 QTLSQRVAQVFHVSEQSVISEINRL-----LRKQHDQSKKDAERQ 457 >UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQB5_RHORT Length = 620 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 196/555 (35%), Positives = 288/555 (51%), Gaps = 29/555 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P F+++L AR + ++ RVKL ++G+ F CPFHNEK+PSFTVN EK F+H Sbjct: 1 MA--LPNAFLDELRARLTLSSVVGRRVKLARKGREFLGLCPFHNEKSPSFTVNDEKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I F M + F E VE L+A LE+P E + + Q + ++M Sbjct: 59 CFGCGAHGDVIGFEMRAANIAFREAVERLSAEAGLEMPRE--TAEDRDRSRQAASHREIM 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + FYQ++L+ P A +YL RGL +ARF +GF+P G + + Q Sbjct: 117 EMACAFYQKALRLPEGRGAMEYLRGRGLDDATLARFRLGFSPQGG-ALKAALAREGVDEQ 175 Query: 181 SLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +++D G+++ +D GR +D FR RVMFPI D GRV+ FG R+LG PKYLNSP+T +F Sbjct: 176 AMVDLGLILRSDDGRPAFDYFRGRVMFPIGDPAGRVVAFGARILGEGQPKYLNSPDTPLF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG LY L A++ + ++V EGYMDV+ALA+ G+ +AVA LGT+ T ++ L+R Sbjct: 236 HKGHSLYNLGPAREAARQSGAIIVAEGYMDVIALARAGLGWAVAPLGTALTEAQMEALWR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + C+DGD AGR AA RA+E ALP + GR LRF LP G DPD L+R+ G A Sbjct: 296 TIPEPVLCFDGDGAGRRAAARAMERALPLIGPGRSLRFALLPGGRDPDDLLREGGPVALR 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++ A+P S + L L+TP+ RA L ++++ +L+ + RQ L ++ Sbjct: 356 QVLDVAVPFSEMAWRELSEGQALTTPEQRAALEAAIDAFVAKIADRSLQGHYRQALRDRF 415 Query: 420 -------GILDDSQLERLMPKAAESGVSR-------PVPQL--------KRTTMRILIGL 457 ++ R P+ R P P L R R+L+ Sbjct: 416 WTVLRGDSARSRAERARKDPRKERKDGGRWRPGDRPPAPGLPVAAPADPARLRERLLLAA 475 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 ++ +PE+ V L R+ +V L L AA + Sbjct: 476 VLNHPEVFDHVGERLGAMILGEGALDSLRQDVVMILGGGKSLDMNGLWSQLSARGYAADV 535 Query: 517 EKLSMWDDIADKNIA 531 L+ + + A Sbjct: 536 AALTRPELLIHGKFA 550 >UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL95_9FIRM Length = 596 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 168/593 (28%), Positives = 279/593 (47%), Gaps = 49/593 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ +I +++ R DI ++I V+L+++G+ CPFHNEKTPSF V + Q ++CFG Sbjct: 1 MIPQEYIQEVVRRNDIEEVIGQYVQLRRRGRTLSGLCPFHNEKTPSFVVYPDTQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I+F+ Y+ L +VE+V++LA+ + +P E E RQ L ++ Sbjct: 61 CGAAGDVINFVRKYNNLGYVESVKQLASRAGMPLPEEED-----KEARARQRLLEINRCA 115 Query: 124 NTFYQQSL--QQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ + L + P A AR+Y + KRGLS I RF +G+AP + +L Sbjct: 116 ARYFYEQLNAKTPEAALARRYWKEKRGLSDAAIRRFGLGYAPEDFSGLLHYLRRRGFRED 175 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L +G++ + +G YD FR RVM PI D RG +I FGGRVL + PKY+NSPET ++H Sbjct: 176 ELEHSGLIKRSAKGNLYDIFRHRVMVPIIDVRGSIIAFGGRVLDDSKPKYINSPETVVYH 235 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R L+ L A++ ++ R ++ EGYMDV+++ + G + AV + GT+ T + ++LL Sbjct: 236 KSRTLFALNIAKKSASK--RYILCEGYMDVISMHEAGFDTAVCACGTALTPEQVKLLSEY 293 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + V+ YD D AG+ A R+L + ++ + +DPD ++K G+E F+ Sbjct: 294 ADEVVLSYDSDEAGQKATERSLGL---FANSPVKVSVLSYQGAKDPDEFIKKYGRERFDM 350 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVP-GETLRIYLRQELGNKL 419 + + F + DL + DGR A+ +++ T R L + Sbjct: 351 LLNGTANPTEFQLKKAKAKYDLRSDDGRLNYIREAIDILTGHGVTPTARDVYAGRLAEET 410 Query: 420 GILDDSQL-----------ERLMPKAAESGVSRPVPQLKR--------------TTMRIL 454 G+ + L R K + V + + R + R L Sbjct: 411 GVAKQAILSQMQGALRAADRRSHRKEQKEMVQKGIAADIRVPYTQGGDAALGAASASRQL 470 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + L+Q+P+ V N+D LP + + + C + L+ Sbjct: 471 VAALLQDPDEVPYVRARLNMDTILLPEMQQALQAIFRCAEEKQPVNLTSLQQRLDDKAFQ 530 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 + + D+ +A+ D LE Q ER G S+++ Sbjct: 531 QVALAQAQNH--DQKLAQ--------RDIDMYLERLQNAKPISERVAGTSDDQ 573 >UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PRIM_SYNE7 Length = 694 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 170/547 (31%), Positives = 276/547 (50%), Gaps = 24/547 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + R DIVD++ +V LKK+GK+F CPFH++K+PSFTV+ KQFY+CF Sbjct: 5 RLHPETIAAVKERADIVDIVSEQVVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFS 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH--QRQTLYQLMD 121 CGA GN I FLM K F E V +LA + + V +++R +R+ LY+++ Sbjct: 65 CGAGGNPIKFLMELGKQSFSEVVLDLAKRYQVPVRTLEVQQHQELQRQLSRRERLYEVLA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY+QSL++P +A YL + R L I +F +G+AP W ++ Sbjct: 125 VATQFYEQSLRRPEGAAALDYLRRSRQLQESTIQKFQLGYAPAQWASLATHLIEQKRFPA 184 Query: 181 SLID-AGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L++ AG++V G+ YDRFR+R+M PI D +GRV+GFGGR L + PKYLNSPET + Sbjct: 185 DLVEEAGLVVARRNGQGYYDRFRDRLMIPIHDLQGRVVGFGGRTLTGEEPKYLNSPETTL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ L+GL +A+ A+ ++ +VVEGY DV+AL GI++AVASLGT+ + ++LL Sbjct: 245 FEKGKLLFGLDKARAAIAKQDQAVVVEGYFDVIALHAAGIDHAVASLGTALSRQQVKLLS 304 Query: 299 RA--TNNVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVRKEGK 355 R +N ++ +D DRAG AA RA+ G+ QLR + LP G+D D +++ Sbjct: 305 RYSESNQIVLNFDADRAGAKAAERAIGEVEDLAYQGQVQLRVLNLPGGKDADEYLQRHSV 364 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 + + ++ + + L+ +L D + + L+ ++P LR + ++ Sbjct: 365 ADYRELLARSPLWLDWQIDQLLRDRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQV 424 Query: 416 GNKLGILD-----------DSQLERLMPKAAESGVSRP-VPQLKRTTMRILIGLLVQNPE 463 +L + +Q+ S +P ++ ++ + + P Sbjct: 425 AERLSQGEARTAVQLASDLRAQVRGQRWHGQASRWEKPGDVSIREQAEAQILKVYLHCPR 484 Query: 464 LATLVPPLE---NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 L V + L L + + + L + + RG N L + Sbjct: 485 LRLAVRKTLHDREIQGFSLQPHRLLWQAIAEI-EEAHLGFAAMYQVERGEGNGDDLAAID 543 Query: 521 MWDDIAD 527 + + D Sbjct: 544 LVPILRD 550 >UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 RepID=B8EK34_METSB Length = 647 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 185/595 (31%), Positives = 279/595 (46%), Gaps = 53/595 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++D+ AR + +++ RVKL + G+ + PF+ EKTPSF VN +K + Sbjct: 2 RFSPSFLDDVKARLPVSEVVRRRVKLIRAGREWKGLSPFNTEKTPSFFVNDQKMAWFDLS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G +GN DF+M + L F E VE LAA + +P S ++ + +R L++ + Sbjct: 62 AGKNGNIFDFVMETEGLSFREAVERLAAEAGVPLP--QASPEAEAQEQKRAGLHETLGLA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ L P AR YL R LS E F IG+AP + G R ++I Sbjct: 120 ADFFCAQLAGPSGGKARDYLTGRALSAEAQKNFRIGYAPADKFALRDHLAGKGVARDTMI 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHK 241 +AG+L+ + YDRFR+R++FPI D+ GR I FGGR L PKYLNSPET +FHK Sbjct: 180 EAGLLIHGEDIAVPYDRFRDRIIFPICDRSGRPIAFGGRALSAEAQPKYLNSPETTLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ + A+ +R++VVEGY+DV+AL++ G VA LGT+ T D +LL++ T Sbjct: 240 GGVLFNHHRARTAAHSSDRIIVVEGYVDVIALSEAGFAETVAPLGTALTPDQAELLWQMT 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C+DGD+AGR AA+RA++ ALP + GR LRF LP+G+DPD L+R G A Sbjct: 300 AEPILCFDGDKAGRKAAYRAIDMALPLIGAGRSLRFALLPEGQDPDDLIRSAGPHAMADV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + QA+PL+ ++ D STP+ RA + ++ ETLR Y R E + Sbjct: 360 LSQALPLADLIWRRETEGADFSTPERRAGFERRLDEIAQEIRDETLRRYYRDEFRQRRQS 419 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKR--------------------------------- 448 L Q + E SRP +R Sbjct: 420 LFAPQRSTVKAPWREG--SRPAQGARRGFGPGRDGFQTADAAPVRLTASPSLAGSALMMR 477 Query: 449 -------TTMRILIGLLVQNPEL-ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT 500 +++ +L+ +P L + + +++ + L L++ S P L Sbjct: 478 SGASGLPPREALILLILISHPGLIEQHLEDIADIEFSGRDAGVLRDRLIDKVSSAP-LDP 536 Query: 501 GQLLEHYRGTNNAATLEKLSMW-----DDIADKNIAEQTFTDSLNHMFDSLLELR 550 + A L +L + +N AE + L + R Sbjct: 537 AGARAFAQEEGFGAVLARLDAFAAHASHWYMKENAAEADADEVLKQALTLHHKER 591 >UniRef50_C7NH61 DNA primase n=2 Tax=Micrococcineae RepID=C7NH61_KYTSD Length = 652 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 174/551 (31%), Positives = 261/551 (47%), Gaps = 30/551 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I I + RT + D++ V L+ G + CPFH+EKTPSF V + Sbjct: 1 MAGLIRSEDIQAVKERTSLEDVVREHVTLRTAGVGSLKGLCPFHDEKTPSFQVRPAVGHW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQI-ERHQRQTLYQ 118 HCFGCG G+ I+F+ D L F E VE LA +E+ +E G GP + +R L + Sbjct: 61 HCFGCGEGGDVIEFVQKIDHLSFAEAVERLAGQLGMELRYEEGKGPQREGGLGRRARLVE 120 Query: 119 LMDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 FY Q L A R +L +G A F +GF+P + + Sbjct: 121 AHRAAEQFYHQQLLGAREARPGRDFLRAKGFGSGEAAHFGVGFSPRTGSALYEHLRAGGF 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSP 234 + L+ AG+ + +G YDRFR RVM+PIRD G +GFG R + +D KYLN+ Sbjct: 181 TDEELLTAGLAGRSSRG-MYDRFRGRVMWPIRDITGDTVGFGARRIFDDDRIAAKYLNTS 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET I+ K + LYGL A++ A+ +VVEGY DV+A G+ AVA+ GT+ A+HI Sbjct: 240 ETPIYTKNQVLYGLDLAKKAMAQQRTAVVVEGYTDVMAAHLSGVEVAVATCGTAFGAEHI 299 Query: 295 QLLFRATN--------NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDP 346 ++L R V+ +DGD AG+ AA +A ET + + Q PDG DP Sbjct: 300 KVLRRILRDEANQAPARVVFTFDGDAAGQKAAMKAYETDQAWAS---QSYVAVAPDGLDP 356 Query: 347 DTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 + L + G +A A +E A+P+ F + + + DL+TP+GR A P+I+++ + Sbjct: 357 NDLRTQRGSQAVRALIEDAVPMFEFAVRTSIDRYDLATPEGRVGAMRAAAPIIARIRDRS 416 Query: 407 LRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELAT 466 L+ + + +G+ + L R + A SG +P + + G + E A Sbjct: 417 LQPEYTRTVAGWIGV-EVGDLSREVAAARRSGAGQPSAPGRPAAPPPVGGGSGRAAEGAG 475 Query: 467 LVP---------PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 P P + + P R+L+ L PG TG EH + A T Sbjct: 476 DAPGELAEPAGPPPLPPVDPRNPDHAAERQLLQVVLQYPGSVTGT--EHSSLSATAFTAP 533 Query: 518 KLSMWDDIADK 528 L++ + Sbjct: 534 ALALVHAAITE 544 >UniRef50_D1BUG1 DNA primase n=3 Tax=Micrococcineae RepID=D1BUG1_XYLCX Length = 642 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 170/615 (27%), Positives = 272/615 (44%), Gaps = 59/615 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R + + R I +++ A V LK G + CPFH+E+TPSF V Y Sbjct: 1 MAGLIKREDVEAVRERARIEEIVSAHVTLKPAGVGSLKGLCPFHDERTPSFHVRPGVGRY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSG-----PSQIERHQRQ 114 HCFGCG G+ I F+ D L F E VE LA +++ +E G + E +RQ Sbjct: 61 HCFGCGESGDVIAFVQKTDGLGFAEAVEYLADRVGVQLRYEDSRGGDSGPARREEPGRRQ 120 Query: 115 TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 L + FY L P A + R++L +R +F +G+AP GWD + + G Sbjct: 121 RLVEANRVAAEFYSAQLFGPDAAAGRKFLAERSFDRSDAEKFGVGYAPTGWDALTRHLQG 180 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLN 232 + L+ AG++ +G YDRFR R+++PIRD G V+GFG R L + PK+LN Sbjct: 181 KGYTQAELVAAGLVSQGQRG-VYDRFRGRLVWPIRDTTGAVVGFGARRLYDDDQGPKFLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 +PET ++ K + LYG+ A++ A R++VVEGY DV+A G+ AVA+ GT+ D Sbjct: 240 TPETVLYKKSQVLYGIDLAKKAIARDKRVVVVEGYADVMAAQLSGVETAVATCGTAFAGD 299 Query: 293 HIQLLFR------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ 334 H +++ R VI +DGD AG+ AA RA Q Sbjct: 300 HAKIVRRLMGDFGAGGGLQLASGQSLGGEVIFTFDGDAAGQKAAVRAF---GEEQRFHAQ 356 Query: 335 LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTL 394 DG DP L +G +A +A ++ +PL F+ ++ DL T +GR Sbjct: 357 TFVAVAADGMDPCDLRIAKGPQAVKALVDSRVPLFEFVIRKVVEGYDLDTVEGRIGALRE 416 Query: 395 ALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSR------------- 441 A PL++ + +++ + L G+ D + R + +A E + Sbjct: 417 AAPLVAGIRDRAMQLGYTRSLARWTGMDTD-EARREVARAGERPRTPDRSTRAADPVAVV 475 Query: 442 -------PVPQLKR---TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNT 491 P+P + T R+ + +++Q P+ V + D +P +R + Sbjct: 476 PAPAPTMPLPDPRDPVARTERMALVVVLQYPQHVPPVFDELSEDAFAVPA---WRAVHAA 532 Query: 492 CLSQPGLTTGQLLE--HYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 + G G+ + + G E ++ D + D++ ++ Sbjct: 533 IRAAGGAAAGRTMSGGAWVGAVQEQAGELVAGLVDQLAVAPLPEDREDAIARFVADVVRA 592 Query: 550 RQEELIARERTHGLS 564 Q+ + R S Sbjct: 593 VQDLGLTRLIADAKS 607 >UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LIA0_9BACT Length = 644 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 165/586 (28%), Positives = 263/586 (44%), Gaps = 35/586 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I ++ DIVD++ V L+K G N CPFHNEKTPSF V+ KQ CFG Sbjct: 1 MIDRQTIQRVMDAADIVDVVKDYVTLRKAGVNLKGLCPFHNEKTPSFVVSPTKQLCKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNA+ FLM ++L + E ++ LA + +EV + S Q R+++ L + Sbjct: 61 CGKGGNAVHFLMEIEQLTYPEAIKTLAKKYGIEVKEKELSAEEQKSISMRESMLVLNEWA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 +++ L + YL +RGL ++I +F +G++ P D + + ++ Sbjct: 121 CSYFSNLLHESKDGQTIGLSYLRQRGLRDDIIKKFHLGYSSPSRDALAQTALNKGYSKDL 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L+ G+ D + DR+ +R++FPI GRVIGFGGR++ + KY+NSPE+ I+ Sbjct: 181 LVQTGLCFETDNHQLRDRYHDRIIFPIHSVSGRVIGFGGRIMQQNKNVGKYINSPESVIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R+LYGLY A++ + + +VEGYMDV+A+ Q GI VAS GTS T I+LL R Sbjct: 241 DKSRELYGLYFAKKAIVKEDACYLVEGYMDVIAMHQSGIENVVASSGTSLTEGQIRLLHR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T+N++ YDGD AG A+ R ++ L +G ++ + LP+GEDPD+ RK E F Sbjct: 301 FTSNIVVLYDGDAAGIHASLRGIDLLL---KEGLNIKVLTLPNGEDPDSFARKHSAETFR 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + +A+ F L+ + P R+ + + I+ VP R +E Sbjct: 358 AYLQAEAVDFIRFKAAMLIKET-ADDPIKRSESVSDIIRSIAIVPNGITRQTYARECAKL 416 Query: 419 LGILDD---SQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 + I + S+ + + G RP I + L Sbjct: 417 MDIDEQLILSEAAKFRKEERIKGADRPQNNAGNPQKTTSIAESINT----------LTLK 466 Query: 476 ENKLPGLGLFRELV-------NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + L RE++ ++ A + KL Sbjct: 467 AGEEQERALIREIICVGEQKLRFANKHGETKEKSIITFIAEDLAADNI-KLQNPLHQKII 525 Query: 529 NIAEQTFTDS---LNHMFDSLLELRQEELIARE--RTHGLSNEERL 569 + A++ F + + L + + L+ E Sbjct: 526 DEAQKEVEQKDFVARDYFINHPDADINALAMQLTTASEKLTKAEIE 571 >UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPY5_OCEIH Length = 604 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 168/612 (27%), Positives = 268/612 (43%), Gaps = 53/612 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M +IP I + DIVD+I ++LKKQG+N+ CPFH EKTPSF+V+ EKQ +H Sbjct: 1 MTNQIPDEIIEQVKNANDIVDVIGEYIQLKKQGRNYFGLCPFHGEKTPSFSVSQEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FL D F E ++ LA +E+P + S + +Q L Sbjct: 61 CFGCGKGGNVFTFLKEIDSFTFYEALQFLAEKQGIELPQTSIKKESFLSEEDQQVLTA-N 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D L Y L+ QYL+ RG+S E + F IG+AP D L+ ++ Sbjct: 120 DWLMKLYHHLLKYTKDGKEGYQYLKDRGISDEALEDFQIGYAPNIKDFTLEFLTKKGFSK 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDI 238 Q L+ G+L + DRFR RV+FPIR+ G+ +GF GR L + PKYLNSPE + Sbjct: 180 QLLVKNGILSAQNDHDVIDRFRGRVIFPIRNAIGKTVGFVGRALHDGVEPKYLNSPEGGL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ A++ + N +++ EG +DV++ Q G+ VA+LGT+ T +LL Sbjct: 240 FQKSKILFNFDLAKKHIRKENEVILFEGSVDVISAYQNGLKNVVATLGTALTESQAKLLN 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ CYDGD AG +AA++A + G ++R + +DPD+ +R G EAF Sbjct: 300 RYVETVVLCYDGDDAGLNAAYKASQLLRSV---GCEIRIAKMDPSDDPDSFIRSNGMEAF 356 Query: 359 E-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + + F +L R L +S + R Y QEL Sbjct: 357 QNRIIRTSDTYMTFYMRYFRRDYNLKVEGDRIAYIEKVLKELSMIESTLEREYYVQELHK 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTT------------------MRILIGLLV 459 + + +S + +L SR + R T + LI ++ Sbjct: 417 EFNLSHESLMTQLQSYRNNQQNSRDNHRYNRYTNKGNSSYQTKLHPAFINAEKKLIAYML 476 Query: 460 QNPELATLVPP------------------LENLDENKLPGLGLFRELVNTCLSQPGLTTG 501 Q+ + V +E P +GLF E ++ + + Sbjct: 477 QDSYITEKVQNDLGAAFNVNDHKIIATHLYAYYEEGNPPDIGLFMERLSEDHLKKHVVEA 536 Query: 502 QLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTH 561 ++ + + + + + +++N++ ++ + + R E Sbjct: 537 VMMTDIANSTDEEIDDYIRFILNESNQNVSIKSLKE----------KQRIAEQENNPMEA 586 Query: 562 GLSNEERLELWT 573 E +EL Sbjct: 587 AKIAMEIIELQK 598 >UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3X9_SALRD Length = 655 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 152/486 (31%), Positives = 237/486 (48%), Gaps = 13/486 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP I ++ D+V++ + V+LK+ G + CPFHNE TPSF+V+ ++ Y+ Sbjct: 1 MA--IPDEKIEEVRTAVDLVEVAEDYVQLKQSGSRYMGLCPFHNEDTPSFSVDPDQNLYY 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+A F+ + + F+E+V LA + + +P E + ER L+ L Sbjct: 59 CFGCQNGGDAFKFVQEIEGVGFLESVRMLADRYGVPLPEEETDPDAANERE--AVLHALR 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY+Q Q A YL +RG + + I +F +G+AP WD +L +R+ Sbjct: 117 FAARFFYRQLTQSDRGRPALDYLRRRGFTPQTIKQFGLGYAPDEWDALLTVAEEEQIDRE 176 Query: 181 SLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND----TPKYLNSPE 235 +L AG+++ + G YDR+R R++FPI G+V+ F GR+L D PKY+NSPE Sbjct: 177 TLEKAGLIIERNDGSGYYDRYRGRIIFPIFSHIGKVLAFAGRILDPDDERDQPKYINSPE 236 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T+++HK LYGL++A+Q + + +L+VEGY DV++L+Q G+ VAS GT+ T I Sbjct: 237 TEVYHKKEVLYGLHQAKQAIRKTDEVLLVEGYTDVISLSQAGVGNVVASSGTALTEQQIG 296 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L R + YD D AG AA R +E L G + LP G DPD V++ G Sbjct: 297 TLDRYAKRAVMLYDADEAGERAALRGMERVLE---AGLGAYAVELPAGNDPDEYVQEHGG 353 Query: 356 EAFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +AF + E L +F + L TP+ R + + ++++P LR Sbjct: 354 DAFSDYVQEHRQDLPSFAYQRARRNGVLETPEDRVEVQREIIESVARIPDPNLRREYVAH 413 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 G+ D L + + + + + +P PP N Sbjct: 414 TSEVTGVPDSDLFRMLEEEREQMERRAQRQRKREQKRQQRQAEEGASPSGEQAAPPDRNG 473 Query: 475 DENKLP 480 P Sbjct: 474 ASPPPP 479 >UniRef50_Q11WL0 DNA primase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11WL0_CYTH3 Length = 653 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 162/505 (32%), Positives = 246/505 (48%), Gaps = 21/505 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ + I+ + D+V++I V LK++G + CCPFHNEKTPSFTV K Y CFG Sbjct: 2 RLTKDTIDQIQQSIDVVEVISDFVSLKRKGHYYSGCCPFHNEKTPSFTVTPAKGIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+AI F+M ++ +VE + +A +N+E+ E S E+ ++ ++ + + Sbjct: 62 CGKGGDAIQFIMEHEGASYVEAMAYMAKKYNIEIKEEELSEEQNFEQSEKDSMLVVTNYA 121 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + +Y L Y ++RG E I +F +G++ WD K + Sbjct: 122 SQYYTDQLWNSEDGKSIGLSYFKERGFREETIKKFELGYSHDQWDGFTKNAIEKGYKTEF 181 Query: 182 LIDAGMLVTNDQ------GRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNS 233 L G+ + D + +DRFR RVMFPI + GRV FG R+L KYLNS Sbjct: 182 LTKTGLSIERDNANENSEKKFFDRFRGRVMFPIHNVAGRVTAFGARILKADKTQAKYLNS 241 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 E+ I+HK + LYGL++A+Q + L+VEGY DV++L Q G+ VAS GTS T D Sbjct: 242 IESVIYHKSKILYGLFQAKQAIRKEEECLLVEGYTDVISLHQSGVENVVASSGTSLTEDQ 301 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 I+L+ R T N+ YDGD AG A+ R ++ L + + P GEDPD+ V+K Sbjct: 302 IKLVKRYTPNITILYDGDAAGLKASLRGVDLILQ---QDMNVSIVVFPQGEDPDSYVQKI 358 Query: 354 GKEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G AF+ ++ +F + ++ + P RA + + IS+VP R Sbjct: 359 GPTAFKDYIKSNKKDFISFKTEISLKEIG-NDPIKRAEVIKDIVESISKVPDAIKRSVFF 417 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP--ELATLVPP 470 +E L I + + KA + G K R + L P EL + Sbjct: 418 RECSKLLEIDEQILISEYNKKAIQKGN---QEAKKWEEDRHALAELQAIPDIELPDDIVR 474 Query: 471 LENLDEN-KLPGLGLFRELVNTCLS 494 L +E+ KL + R L+N S Sbjct: 475 LSIEEESLKLHERDMMRYLINYASS 499 >UniRef50_A7NG02 DNA primase n=2 Tax=Roseiflexus RepID=A7NG02_ROSCS Length = 652 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 171/628 (27%), Positives = 272/628 (43%), Gaps = 62/628 (9%) Query: 11 NDLLARTDIVDLIDARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCGAHGN 69 + + + DIVD I A V L+K G+++ CPFH N +TP+F V + Q +HCFGC A G Sbjct: 6 DQIKEKIDIVDFISAYVPLRKTGRSYVGFCPFHPNTRTPAFHVFPDTQSFHCFGCKASGT 65 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 DFLM + +EF E +E LA +++ + Q R L ++ F++ Sbjct: 66 IFDFLMRREGIEFREALERLAQRAGVQLHPRTEAEEQQDR--LRTRLLEVNAAAAAFFRH 123 Query: 130 SL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN-PENRQSLIDAGM 187 L + AR Y+ KR + F IG+AP W +L + + AG+ Sbjct: 124 MLVKSQRGEEARAYVAKRRIDDATGEAFLIGYAPDDWSLLLSYLTERRGFAPEEIEAAGL 183 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + ++ YDRFR R+MFPIR G ++ FGGR LG+ PKY+NSP+T +F KG+ LYG Sbjct: 184 AIHHETRGYYDRFRHRLMFPIRSASGEIVAFGGRALGDVQPKYMNSPQTPLFDKGKVLYG 243 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L A+ + + ++VEGY+DV+ QYG VA LGT+ TADH+ L+ + ++ V Sbjct: 244 LDLARDAIRQSDAAVIVEGYVDVIIAHQYGFRNVVAPLGTALTADHVALVKKLSHRVYLA 303 Query: 308 YDGDRAGRDAAWRALETALP------------------YMTDGRQLRFMFLPDGEDPDTL 349 D D AG A + L+ ++R + LP+G+DPD + Sbjct: 304 LDADTAGARATLKGLQALQSQPEGELTAVISPQGVIALQRRQDVEIRILALPEGKDPDEV 363 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + +E E + A + A P F +L +DLS+ GRA PL++Q+ + Sbjct: 364 I-QENPEQWRAALAAARPAMDFYIETLTSDLDLSSGRGRAEAVERIAPLLTQIANPVEQA 422 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK---------------------- 447 + Q+L + I + L L KA + G RP Q + Sbjct: 423 HYIQQLARLIDIEEAHILAALSNKARQEGQRRPSDQGRATKVLEQQPGDANQQPDETPPP 482 Query: 448 RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLF--------------RELVNTCL 493 T L+ +++ P V + D P L R L + Sbjct: 483 PTQEEYLLSWIIRYPTARAAVEEKLHRDLATYPALQSLMSGTIDELFTSDECRALWRAWI 542 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEE 553 + P + Q A +++ + A + A + D+L + + Sbjct: 543 AAPTGSDPQAWATTLYAPLDAVAQRVL--ELHAPQPQAYRIVNDALECATILQRDAAKRW 600 Query: 554 LIARERTHGLSNEERLELWTLNQELAKK 581 L+ R + E + L+Q + K Sbjct: 601 LVQIARMQTAATGEAEQEILLDQLVQVK 628 >UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9IK88_BORPD Length = 682 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 196/426 (46%), Positives = 276/426 (64%), Gaps = 8/426 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI DLLAR D+VD++ V+L+K G N CPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE----RHQRQTLYQL 119 CGAHG AI FLM + F E V LA + VP E S Q E + + Q+ Sbjct: 61 CGAHGTAITFLMEHTGASFPEAVRTLAGSVGMTVPEENRSPRQQAESARRKAEESRHTQV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +D Y + L+ + +A QYL++RGL+ E+ A F +G++ + K F + + Sbjct: 121 LDAAQAHYLRQLR--ASPAAIQYLKQRGLTGEIAAHFGLGWSGTDRHGLAKVF--DNYDD 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +L++AG+++ ++ GR YDRFRERVMFPIR+ RG +IGFGGR++G PKYLNSPET +F Sbjct: 177 PTLVEAGLVIESEDGRRYDRFRERVMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG++LYGL+EA+Q + +++VVEGYMDVV LAQ GI AVA+LGT+TT DH++ L R Sbjct: 237 SKGQELYGLWEARQAIRQEGQVIVVEGYMDVVGLAQQGIANAVATLGTATTPDHVKKLLR 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ V+ +DGD AGR AAWRAL+ LP + D +RF+FLP DPD+ VR+ G EAF Sbjct: 297 SSDRVVFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVRELGAEAFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A + +AM LS FL L + +L+ +GRA A PL++ +P LR+ + +E+ ++ Sbjct: 357 ACLGEAMALSRFLLEELASRHNLAEAEGRASCLHEAKPLLAAIPECALRLQIEREMARQV 416 Query: 420 GILDDS 425 + + Sbjct: 417 QLTPEE 422 Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 7/123 (5%) Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 +PEL + + +K P LGL R+L+ + G LL+ ++ A + K Sbjct: 556 AHPELVDTMGDQQLEVLDKGPHLGLVRDLIMLAQTSGARHVGALLQAADPDSDLAAVLKG 615 Query: 520 SMWDDIADKNIAEQ--TFTDSLNHMFDSLLELRQEELIARERTHGLSNEE-RLELWTLNQ 576 D +A +++ E + D+L + +L GL +EE R L+ Sbjct: 616 MRADLLAQEDLPEPQTEWDDALRRIEFDSARAEMAKL----AETGLGSEEARQRYQELSA 671 Query: 577 ELA 579 LA Sbjct: 672 RLA 674 >UniRef50_Q6F8J4 DNA primase n=16 Tax=Acinetobacter RepID=Q6F8J4_ACIAD Length = 629 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 213/643 (33%), Positives = 331/643 (51%), Gaps = 85/643 (13%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP+ I+ +L RTD+V+LI RVKLKK G+ + CCPFH EK+PSF V +K +YH Sbjct: 1 MA--IPQHTIDQILDRTDLVELIGQRVKLKKTGRTYSGCCPFHQEKSPSFHVYRDKGYYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMH--------------------------- 93 CFGC A+GNAI FLM+ D F++ ++EL++ Sbjct: 59 CFGCQANGNAIRFLMDIDGRNFIDVMQELSSKSGVELPKDNFEQKKLSYKRNTQKPEPKP 118 Query: 94 -----------------------NLEVPFEAGSGPSQIERH--------QRQTLYQLMDG 122 L+ P +Q ++ Q LY L++ Sbjct: 119 VVNTEKSAPSHHAAISESSEQIDGLQAPSYFDDPFAQFDQSYMGFEDAPQEGNLYDLLEN 178 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + FY++ L P + A+QY ++RGLS E I + +G+AP W ++ K F P + + L Sbjct: 179 VAQFYEKQL--PNSNKAQQYFKQRGLSAETIQFWRLGYAPEDWQHLEKAF---PYDIEGL 233 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHK 241 G++ ++D GR +D RERV+FPIRD +GRV+GFGGR L ++ PKY+NSP+++IFHK Sbjct: 234 KQVGLIRSSDSGRDFDLLRERVIFPIRDHKGRVVGFGGRALNDEIKPKYINSPDSEIFHK 293 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 + LYGLYE ++ + L+VEGYMDV+AL QYG+ AVA+LGT++ ADH+ LF+ Sbjct: 294 NQLLYGLYEGRKL--KAKDWLMVEGYMDVIALQQYGVYGAVATLGTASNADHLNTLFKQN 351 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + + +DGD AG+ AA R LE ALP + DGR+L+F LP DPD+L+R+EG E F+ Sbjct: 352 SRITIAFDGDAAGQKAARRTLEIALPSLNDGRELKFFVLPKEHDPDSLIRREGLEHFQRL 411 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPG-ETLRIYLRQELGNKLG 420 +EQA LS F+F L Q D+STP+G++++ L +P + R L Q KLG Sbjct: 412 LEQAPLLSDFIFAHLTQQHDISTPEGKSQVMGELRELTELLPKQGSFRYLLTQSFREKLG 471 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK-- 478 + + P+ + Q K + LL+Q+P L L + + Sbjct: 472 LG-----RKWTPQISHDASLSFNIQTKDED--FAVALLMQHPYLYIHFEALRAFIDPQQL 524 Query: 479 -LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNN--AATLEKLSMWDDIADKNIAEQTF 535 L + + + L T +L ++ A +E+ + + A++ Sbjct: 525 LAQILAIIDRVFDELPDDQELATYYVLGACNQFSHEIADIIERTDIQTLMNAPETADKHA 584 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + + + L + + I+ + L R +L L++++ Sbjct: 585 KEYALGLKEKYLRQKLKAPISLIESRNL----RQQLNELSKQI 623 >UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH Length = 596 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 171/586 (29%), Positives = 271/586 (46%), Gaps = 33/586 (5%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 DIVD+I + VKL+K+G N CPFHNEK+PSF+V+G KQ YHCFGCG GN FLM Y Sbjct: 16 DIVDVIGSYVKLQKRGANHMGLCPFHNEKSPSFSVSGSKQMYHCFGCGVGGNVFTFLMEY 75 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 + FVE ++ L +++P S ++ + + +L +Y L+ Sbjct: 76 ENYTFVEALKVLGDRAGVKLPELEYSEEAKKAADLKTRVLELYKEAGKYYYYQLRSKQGE 135 Query: 138 SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSY 197 A YL RGLS E+I +F +G++ D++ + L +G+ + +Y Sbjct: 136 EALAYLRNRGLSEEIITKFGLGYSTKYSDDLYQYMKKAGYEDSLLRQSGLFTMEESKGAY 195 Query: 198 DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAE 257 D+F RVMFPI D +VI FGGRV+G+ PKYLNSPET +F K R L+GL A+ Sbjct: 196 DKFWNRVMFPIMDGNNKVIAFGGRVMGDGVPKYLNSPETIVFDKSRNLFGLNFARTS--R 253 Query: 258 PNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDA 317 + L+ EGYMDV+AL Q G AVASLGT+ T +LL R T YD D AG A Sbjct: 254 KDYFLICEGYMDVIALHQAGFQNAVASLGTAFTPQQARLLSRYTKEAYLTYDSDGAGVAA 313 Query: 318 AWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLM 377 A RA+ G + + + +DPD ++ G E ++ R++QAM F + L Sbjct: 314 AIRAIPIL---KEAGLSAKVIDMKPYKDPDEFIKALGAEEYQNRIDQAMNSFFFEISVLE 370 Query: 378 PQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMP----- 432 DL P+ + + + E R + L K + D+ + + Sbjct: 371 RDYDLGDPEQKTKFFNEMAKKLLIFTEEIERNNYIEALSRKYNVSYDNLRKLVNRYGAQM 430 Query: 433 -----------KAAESGVSRPVPQL-KRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 + E + P+ + + +IL+ L+ + + + + D+ Sbjct: 431 TVVNVAKETRDREKEQNAKKGKPEEGMQKSQKILLTWLIDDSKAFDQIRGIITADDFTEE 490 Query: 481 GLGLFRELVNTCL----SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE--QT 534 L+RE+ N S+ +T +++ + + L + AE + Sbjct: 491 ---LYREVANMVFEQYESEHKVTPAKIINRFESKELQTEVAGLFSTSIQLEMTEAERRKL 547 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLE--LWTLNQEL 578 F D++ + + L++ ++ I L N + + L L+ L Sbjct: 548 FADTVVRVKRASLDIAYKKAIEDNDIMALQNVMKEQHGLEKLHSSL 593 >UniRef50_C6CTW0 DNA primase n=4 Tax=Bacillales RepID=C6CTW0_PAESJ Length = 612 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 163/608 (26%), Positives = 259/608 (42%), Gaps = 35/608 (5%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G+IP I + DIVD + V L K GK CPFH+EKTPSFTV E Q +HC+ Sbjct: 4 GKIPDDVIEAVRRHHDIVDTVSKYVHLSKNGKYMKGLCPFHSEKTPSFTVTPELQIFHCY 63 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQLMD 121 GCG GN I F+ + F E V LA + V + G +R + + + Sbjct: 64 GCGKTGNVIRFVEEIESYTFPEAVRVLAEEAGIPVTWANPDGSKPTAADTERSAVLEAHE 123 Query: 122 GLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 Y L +A+ YL RGL ++I F IG+AP WD + + + Sbjct: 124 LTAKLYNYLLNNTQHGRAAKDYLRDRGLGDKLINHFMIGYAPEQWDTLSRFLTARNFDSS 183 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+L G Y DRFR R+MFPI D+ G+V F GR++G PKYLNSPET +F Sbjct: 184 LMEKGGLLSAKSDGSGYVDRFRGRIMFPIWDRDGKVTAFAGRIIGEGQPKYLNSPETMLF 243 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R +Y L+ A+ + ++++ EGYMDV+ G+ +A++GT+ T +H +L R Sbjct: 244 TKSRTIYNLHHARPAIRKSKQVVLFEGYMDVIKSWSAGVKNGIATMGTALTEEHCSILAR 303 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA-F 358 ++ CYDGD AG+ AA +++ G ++ LP G+DPD + + G + Sbjct: 304 QAEEIVICYDGDDAGQAAAMKSIPML---EGAGLRVMVAMLPKGKDPDEYITEYGPDDYL 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++Q + + F L +GR A +++++ R QEL + Sbjct: 361 REVIDQPVTTTKFKLIYSRKNHILLKEEGRKNYLLEAAGIVAELDSAIEREVYLQELSRE 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVP------------------------QLKRTTMRIL 454 + + K E +P R L Sbjct: 421 FNFPLEVLKQDCHIKHQELQKKKPGRDNNDNSWNNGRNENRRRSGPPVLMPAYTYVERRL 480 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + +++++ ++A V N L L G+ + + Sbjct: 481 LHVMMRDRDVAQTVHEKLGDAFNIEDHAALAAYLYAFYAQGYDPDAGRFIASLQDERLER 540 Query: 515 TLEKLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG--LSNEERLE 570 T + M D D I E D + ++ ++EE++ ER L+ + E Sbjct: 541 TAAAILMMDGDFPFDDAILEADIQDIIKVPRFREIDRKKEEMMQAERAGDHLLAAQMLSE 600 Query: 571 LWTLNQEL 578 + TL ++L Sbjct: 601 IITLERQL 608 >UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWY0_9PROT Length = 580 Score = 467 bits (1201), Expect = e-130, Method: Composition-based stats. Identities = 206/584 (35%), Positives = 299/584 (51%), Gaps = 24/584 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P F++++LARTDIV+LI V+LKK G N CPFH+EK+PSF+V+ +KQ Y+ Sbjct: 1 MAHFQP-SFLDEVLARTDIVELIGRHVELKKSGSNLMGLCPFHHEKSPSFSVSADKQLYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G A FLM +D F E VE LA LEVP E R +R Y+L+ Sbjct: 60 CFGCGQGGGAFQFLMEHDGYAFPEAVEYLAEKAGLEVPQETKQDHGDEVRQKRD--YELL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + ++L + A YL++RGL ++I + +G+APPG+ + + FG + Sbjct: 118 ERAAQAMNKALHGELGGKAAAYLQQRGLPADIIRDYMLGYAPPGYGFMKRLFGSDSATNS 177 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDI 238 L G++ + G DRFR+R+MF IRD+RGR++GFGGRVLG KYLNSPET Sbjct: 178 RLETVGLVFKGEHGYG-DRFRDRLMFAIRDRRGRIVGFGGRVLGSGEGEAKYLNSPETPY 236 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK LYG E + + +L+VVEGYMDV+ALA +G+ +A LGT+ I+ +F Sbjct: 237 FHKSDLLYGFSEHRDTIRKSKQLVVVEGYMDVLALASHGLKIGLAPLGTAIGERQIREIF 296 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + + C+DGDRAGR AAWRALE LP + F++LP+GEDPD+L+++EG EAF Sbjct: 297 RLCDTPVFCFDGDRAGRQAAWRALERMLPLLKAELMPAFLYLPEGEDPDSLLKQEGGEAF 356 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 R+ E+A P+ + + + +GRAR++ A +++ + L RQE Sbjct: 357 ARRLKEEAKPVLE-TWLHGLKLLAGQGAEGRARMAKKADTMLAAMTDSYLMQAWRQEAER 415 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 GI + + A +R L R + G L+Q P L Sbjct: 416 SSGIALQHRRRAAVTDVASEPAARADIVLNPVEDRFMAG-LMQKP---ARFLQLSGAAME 471 Query: 478 KLPGLGLFRELVNTCLS-QPGLTTGQLLEHYRGTNNAATLEK-LSMWDDIADKNIAEQTF 535 L + S Q T + + + +S W + A + E Sbjct: 472 FFVDNPAIHALYSRAFSMQADAETETIDIARQLIRECPADQNMISRWINQATVHDIE--- 528 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 LL++ ++ R R GLS E ++L +EL Sbjct: 529 ------YKSLLLDMEANDIRCRIR-QGLSLGESVQLQKRLRELQ 565 >UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 RepID=C0JZY3_9BACT Length = 658 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 176/585 (30%), Positives = 276/585 (47%), Gaps = 22/585 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ + +L + D++ V LK++G + ACCPFHNEKTPSF V + Y CFG Sbjct: 1 MIPQETVQLILDTARVEDVVGDFVTLKRRGSSLWACCPFHNEKTPSFHVEPSRGIYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G A+ F+M Y+KL + E ++ LA +++EV + S R + ++L + + Sbjct: 61 CGKSGTAVGFVMEYEKLSYTEALKYLARKYHIEVKEKEESAEDIAARQRNESLLAVSEFA 120 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY+ L + A QY RGL E IA++ +G+AP + + + + L Sbjct: 121 FDFYKDQLATDEGRAVAVQYFHSRGLEDETIAKYGLGWAPKSKNALTEAAKKEGYKDEYL 180 Query: 183 IDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 ++ G+ D G +DRF +RVMFPI GRVI FGGR L KY+NS E++I+ Sbjct: 181 LETGLCAQWDTDGSLHDRFYDRVMFPIHSVSGRVIAFGGRTLFTDKSVAKYVNSKESEIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R LYG+Y A+ + ++ +VEGY+DV+++ Q GI VAS GTS T + I+L+ R Sbjct: 241 VKSRSLYGIYFAKSAISRADKCYLVEGYLDVLSMHQLGITNVVASSGTSLTVEQIRLIKR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T NV YDGD AG AA R ++ L +G ++ + +PDG+DPD+ RK E E Sbjct: 301 FTENVTIMYDGDPAGIHAALRGIDLIL---KEGMNVKVVLIPDGDDPDSYARKHTLEEVE 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + AF + L+ + + P RA L ++ +P R + K Sbjct: 358 AFIAANEQDFIAFKADLLLGEAG-NDPLKRANLINDIADSVAGIPDAVKRSVYTDAISAK 416 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 I D +R+ + E Q +R +R V + AT PP+ L + Sbjct: 417 FRIDTDILTDRV-RRTREKIQGEERTQAQREAIRARREEDVPRTQEATYTPPVNELRALE 475 Query: 479 LPGLGL---FRELVNTCLSQ--PGLTTGQLLEHYRGTNN---AATLEKLSMWDDIADKNI 530 L REL+ L L E Y + L+ + + Sbjct: 476 TQSPILAPSERELLRFILMDGSTPLVFESDSEFYSESPQTVAEFIDTALAGDGIVFANDA 535 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 ++T+ F ++++ I R+ +G + R + L+ Sbjct: 536 YQRTYEA----YFALYDAGKEQDEIVRDLLNGPDDAVRFVVSQLS 576 >UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR5_ERYLH Length = 625 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 180/539 (33%), Positives = 275/539 (51%), Gaps = 32/539 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + ++++L AR + +I KL++ G+ + ACCPFHNEKTPSFTV+ EK FYHCFG Sbjct: 1 MLSPQWLDELRARVTLSSVIMRTTKLQRAGREWKACCPFHNEKTPSFTVSDEKGFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+ I ++ + L+F++ V+ELA LEVP Q E+ R +L + + Sbjct: 61 CGAHGDVIRWMTDQRGLQFMDAVKELAQEAGLEVPAPDPRAAQQAEK--RASLIDVTEAS 118 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++ + L+ AR YL RG S+ VI F G+AP + G L+ Sbjct: 119 QRWFVEQLRGAEGARARDYLASRGFSNGVIREFGFGYAPDSKQAM---GSGVGFEDAMLV 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHK 241 ++GM + + G YDRFR+R+M PI+D RGRVI FGGR+L + KYLNSP+T +F K Sbjct: 176 ESGMRIETEDGSKYDRFRDRLMLPIQDARGRVIAFGGRILDKRDGVAKYLNSPDTPLFDK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LY L+ A + + R++VVEGYMDV+ALA GI AVA LGT+ T I++L+R Sbjct: 236 GRTLYNLHRAGPASRQTGRIVVVEGYMDVIALANAGIEDAVAPLGTALTERQIEMLWRMV 295 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C+DGD AG+ AA RA++ ALP + L + LP G DPD L+ + G +A E Sbjct: 296 ERPILCFDGDAAGQRAAMRAIQRALPLLRPAHSLGIVRLPAGLDPDDLINQRGAQAMEDI 355 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + + L L+ L +P+ +A L + + + ++ R+EL ++ Sbjct: 356 LAKPGSLLDTLWQFERDAEPLDSPEAKAGLKARLMAHVDAIGDADIKALYRRELLDRFSD 415 Query: 422 LDDSQLERLMPKAAE-----SGVSRPVPQLKRTTMRI------------LIGLLVQNPEL 464 + E+ K + RP P R + ++ L+++P+ Sbjct: 416 YAFPRREKAPWKPNGFSKSLASRPRPDPAAIRALQKTIQGGSRDALTGAVVAGLIRHPD- 474 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 + + L E + R + P L ++LE +A +L+ D Sbjct: 475 -QIDRHADALAEAAERDANIARAI------NPLLDMAEILEDGGELPISADSGRLAPPD 526 >UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9DELT Length = 590 Score = 466 bits (1199), Expect = e-129, Method: Composition-based stats. Identities = 165/606 (27%), Positives = 264/606 (43%), Gaps = 57/606 (9%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R + + AR I D++ V LK + CPFH E PS +VN ++ F++CFGC Sbjct: 1 MDRSAVEAVKARISIADIVRRYVDLKPVSGRWMGACPFHQETKPSMSVNDDEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ DF + LEF E +E LAA +E+ + + + L+ + D N Sbjct: 61 QASGDVFDFYARINGLEFREALEHLAAEAGVELGNVPHDPHAAERKARIAMLFDMHDEAN 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++Q++L AR+YL KRG++ +VI +F +G++P W + G + ++ Sbjct: 121 AWFQRNLTMEAGAVAREYLTKRGMTPDVIRKFGLGYSPDDWRGLESHLKGKGRTPELGVE 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N++G YDRFR R++FPI++ GRVI FGGR++ + PKYLNS +T I+ KG Sbjct: 181 AGLLSQNEKGNIYDRFRGRLIFPIQNLSGRVIAFGGRIITDGEPKYLNSSDTPIYKKGDH 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ R L+ EGYMDV++L Q+G A LGT+ T + ++ L + V Sbjct: 241 LYGLNLARSTMTRSKRALLTEGYMDVISLHQFGYTDACGVLGTALTPEQVKRLAGFCSRV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 +DGD AGR AA ++ L G R + +P GED D+L++ +G E FEA MEQ Sbjct: 301 DLVFDGDGAGRKAALKSSRMIL---LQGVACRVVLMPQGEDVDSLLQTKGAEGFEACMEQ 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F +L + + A ++ +P +LR + + LG+ + Sbjct: 358 APDGLDFCMTTLRNEFAPR------EIMAWAKGFLTDLPDASLRAFYLPRIAGGLGLSEA 411 Query: 425 SQLER--LMPKAAESGVSRPVPQLKRTTM------------------RILIGLLVQNPEL 464 + + RP + + + +Q P+ Sbjct: 412 DFRRDTGVSGPPRNTPGRRPPERGSHQAQDGQGRQNLPAVGKEDHDDKYFLRFAIQYPDY 471 Query: 465 ATLVPPLENLDENKLP-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL------- 516 + L+ +LVN GQ+L + Sbjct: 472 VQALAERGFAHVLATQWAGALWEKLVNAQH-------GQILSQLNDQEKSFYFKCRAEVR 524 Query: 517 -------EKLSMWDDI------ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGL 563 E L W+ I A + + ++LN S R E Sbjct: 525 QTALTGRELLDEWEHICNKIAFAQQKEDRRQLKEALNQAQLSGDRQRINECFRALEESLR 584 Query: 564 SNEERL 569 ++E+ Sbjct: 585 RDDEQH 590 >UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38X97_LACSS Length = 627 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 167/628 (26%), Positives = 275/628 (43%), Gaps = 56/628 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP I+++ ++T+IVD++ V+LKK GKN CPFH+EKTPSF+V+ EKQ +H Sbjct: 1 MAGKIPNEVIDEIRSQTNIVDVVGQYVQLKKAGKNLFGVCPFHDEKTPSFSVSEEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN FLM +++ F E + ++A + + E + QL Sbjct: 61 CFSCGRGGNVFKFLMELEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLY 120 Query: 121 DGLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 N ++ L V A YL +R ++ +I F+IG+ P D +L F Sbjct: 121 QQANELFKHILTSTVAGQPALDYLHERQMTDALIETFSIGYLPDQSDLLLTFFQNKDIPY 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETD 237 Q L +G+ + G+ +DRF RVMFPIR+ +G VI F GRVL D PKYLNSPET Sbjct: 181 QVLRQSGLFIETQTGKLHDRFSGRVMFPIRNAQGEVIAFSGRVLTKQPDQPKYLNSPETV 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K + L+ A+Q + ++ + EG+MDV+A + VAS+GTS T + + LL Sbjct: 241 IFNKRKVLFNYDLAKQTIHQSKKVYLFEGFMDVIAAYSADVVNGVASMGTSLTTEQLNLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + ++ CYDGD+ G +A RA+ + T +L + LP G DPD VR+ G Sbjct: 301 AQQAQELVVCYDGDQPGIEAMKRAINLLQQHTT--LELSVVVLPGGVDPDEYVRQYGGPQ 358 Query: 358 FEARMEQAM-PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+ ++ AF L ++L + AL ++++V +++ Sbjct: 359 FKETLQNGTETPIAFELRYLKQGLNLDNEKDQLDYVQQALEVVARVESPLAIEVYLKQVE 418 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQL------------------------------ 446 GI D+ +L + P+ Q+ Sbjct: 419 ADSGITLDTLKRQLQTVRVKHATQVPINQVGQPEAPPYFDDFQAPPLPPEEMAGAFGDPR 478 Query: 447 ----KRTTMRI---------LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCL 493 KR R+ ++ +L+ N ++ + + P L+ + Sbjct: 479 TIAPKRQPKRLTRIEHAEQEILHMLIHNEDVRLQLENNADFSFVHTPYQLLYELWRSFIA 538 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD--KNIAEQTFTDSLNHMFDSLLELRQ 551 + L++L + D+ D + ++ D L + + ++ R Sbjct: 539 EGQPADIAGFTSYIPDD-----LQQLVVQIDLLDLPEEANQEALNDCLAVIGKNSIQERL 593 Query: 552 EELIARERTHGLSNEERLELWTLNQELA 579 +E + EL N+ + Sbjct: 594 KEAKIALKEATKLGNHSEELRLTNEVIQ 621 >UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F851_9ACTN Length = 663 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 160/452 (35%), Positives = 238/452 (52%), Gaps = 16/452 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCF 62 I N + TD+V L+ V+L+ +G + CCPFH EKTPSF V Q +HCF Sbjct: 1 MISEDDKNKVRDATDLVALVSETVELRPRGNTDLWGCCPFHGEKTPSFHVIPATQVWHCF 60 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+A ++M + L F E++ LA +E+ + S +R+ L ++ + Sbjct: 61 GCGEGGDAFTYVMKREGLSFPESIRYLADRAGIELEEDHSFKRSGTKRN---RLVEVCEE 117 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +FY L + R Y ++R L E ++ +GFAP G +++ G Q + Sbjct: 118 TCSFYHTLLMRGKDARGRDYCKERELDAETCRKYRLGFAP-GHGMLVRHLGSKGFTPQEM 176 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFH 240 IDA + + G DRF +RVMFPI D++GR I FGGR L + KYLNS ET IFH Sbjct: 177 IDANVAFRSRGGGLVDRFFDRVMFPIFDEQGRCIAFGGRALDKEKTNAKYLNSSETPIFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYG A+ N +VVEGY+ ++ + GI VA LGT+ T +H++ L R Sbjct: 237 KGKNLYGFNWAKDHIVNNNEAIVVEGYISAMSCWKAGIENIVAVLGTALTENHVKTLMRF 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T ++ +DGD AG+ AA RA++ D LR + LP+G+DPD VR G EA Sbjct: 297 TKKIVYMFDGDAAGQKAARRAVQFI---EKDDLDLRCVILPNGQDPDDFVRANGGEALRE 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ ++PL F+F L + D+STP GRA+ AL LI + + ++ ++LG Sbjct: 354 LLDNSIPLMDFVFGKLEEESDISTPGGRAKAMRSALELIYPLRASYMIDSYYMQIADRLG 413 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMR 452 + D+ +A+ V R V Q + T R Sbjct: 414 LDVDTI------RASAGKVFREVQQREETARR 439 >UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZA5_9CLOT Length = 597 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 159/603 (26%), Positives = 275/603 (45%), Gaps = 48/603 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+P F+ +L R +I+D++ V LK+ G+ CPFH EKTPSF VN E+ ++HCFG Sbjct: 9 RLPDSFLQELKDRNNILDVVSGYVNLKRSGRTMSGLCPFHGEKTPSFHVNAEQGYFHCFG 68 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I F+ + L++++ V+ LA +E+P G + H R +Y+ Sbjct: 69 CGAGGDVITFIRKIENLDYIDAVKFLAQRAGMELPE---DGRDEAAAHIRGRIYEANREA 125 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ + L +A YL RGL+ I F +G++P ++++ + +I Sbjct: 126 ARFFHRCLYSEEGKNALAYLRGRGLTERTIKHFGLGYSPNSRYALVRQLRSLGFRDEEII 185 Query: 184 DAGMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 A + G + DRF +RVMFPI D RG VIGFGGR++ + PKYLN+ +T +F+K Sbjct: 186 RANLGFQGRYGSKGALDRFADRVMFPIIDLRGNVIGFGGRIMTDQKPKYLNTSDTMVFNK 245 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 + LY L A+ NA RL++ EGYMDV+AL Q G AVA+LGTS T + +L+ R Sbjct: 246 SQNLYALNFAK--NAGEKRLILAEGYMDVIALHQAGFPTAVATLGTSLTTEQARLIARYA 303 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE---GKEAF 358 + CYD D AG+ A RA+ G +R + + G+DPD +R G F Sbjct: 304 QEAVICYDSDGAGQKATARAIPML---REAGLLVRVLTVTGGKDPDEFIRSHGDQGPARF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + +E + + +DLS PDG+ T + +++ + + + + + Sbjct: 361 KQLLEASGNDVEYRLQKAANGLDLSQPDGKIAYLTACVSILATLDSKIEQEVYAGRIAAE 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKR-----------------------TTMRILI 455 + I S + ++ + + + V + + L Sbjct: 421 VEIEKSSVMAQVEKQMRKRRRDQSVQEFREIQKATSGFGDAVNPQKSQNLRAANAEEALT 480 Query: 456 GLLVQNPELATLVPPLENLDEN-KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 ++ NP++A + D+ ++ + ++ L + + + Sbjct: 481 AYVINNPDMANNIEKWIRPDDFVTDFNRRVYETVTGRIRENRPVSPTDLTQDFSEQEM-S 539 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + + + +L D ++QE+ A+ R L ++E L+ Sbjct: 540 RIAGMLYKASVGGE---------TLEAAKDYCKIIKQEKSSAKLREP-LEDDEAKRLFEE 589 Query: 575 NQE 577 Q+ Sbjct: 590 IQK 592 >UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE Length = 675 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 143/453 (31%), Positives = 229/453 (50%), Gaps = 10/453 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ +L IV+++ V L+K+G N+ CPFHNEKTPSF+V+ K CF Sbjct: 9 MIDQATIDRILDVAQIVEVVSDFVTLRKRGVNYVGLCPFHNEKTPSFSVSPSKGLCKCFS 68 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNA+ F+M ++++ + E + LA +N+E+ + + + R++++ + + Sbjct: 69 CGKGGNAVHFIMEHEQMSYPEALRYLAKKYNIEIKERELTNEEKEVQSNRESMFIVNNFA 128 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++Q L+ V Y +RG ++I +F +GF+ G D + + ++ Sbjct: 129 RDYFQNILKNHVDGRSIGLAYFRQRGFRDDIIDKFQLGFSTEGRDALAQEALRKGFKQEF 188 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT---PKYLNSPETDI 238 L+ G+ D + DRF RVMFP+ G+V+ FGGRVL + KY+NSPE++I Sbjct: 189 LVKTGLCYETDDHKLRDRFWGRVMFPVHTLSGKVVAFGGRVLSTENKKLAKYVNSPESEI 248 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK +LYG+Y A+Q + +R +VEGY DV+++ Q G+ VAS GTS T I+L+ Sbjct: 249 YHKSNELYGIYFAKQAIVKQDRCFLVEGYTDVISMHQSGVENVVASSGTSLTPGQIRLIH 308 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK F Sbjct: 309 RFTNNITVLYDGDMAGIKASIRGIDMLLE---EGMNIKVCLLPDGDDPDSFARKHNATEF 365 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + E F LM P RA L + I+ +P +R +E G Sbjct: 366 QNFIQEHETDFIRFKAQLLMEDAG-KDPMKRAELINDIVRSIAVIPEAIVRDVYIKECGQ 424 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTT 450 L I D + + + P Sbjct: 425 LLRIEDKLLVSEVAKRRELQAEKGNKPIASNNA 457 >UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=Q3AT54_CHLCH Length = 660 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 159/495 (32%), Positives = 248/495 (50%), Gaps = 20/495 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP I+++ DIVD++ V L+ G+N+ A PF EKTPSF V+ +KQ Y CF Sbjct: 3 MIPPAIIDEVRQAADIVDVVSDYVALQPSGRNYKALSPFTQEKTPSFIVSPDKQIYKCFS 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN F+M +K+ F+E ++ +A +++ + E + Q + Sbjct: 63 TGKAGNVFSFIMEMEKVPFMEALKLVAQRAGIDISRYT-EPKGKQEGEEEQGSGAALRWA 121 Query: 124 NTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + L+QP +Y E+RGL E I RF +G+AP WD +L+ + L Sbjct: 122 ARMFHSLLKQPAGAEGWRYFVEERGLREETINRFGLGYAPESWDFLLREARREGIKSEQL 181 Query: 183 IDAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 ++ G+LV+ ++ YD FR RV+FPI + G+V+GFGGR L +D PKYLNSPE+ +F Sbjct: 182 VELGLLVSHREKQSLYDSFRHRVIFPIFSRGGQVVGFGGRALVSDERSPKYLNSPESAMF 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + LYGL+ A+ + R ++VEGYMDV+AL Q G+ AVAS GT+ T ++L Sbjct: 242 AKSKLLYGLHFAKNEIRRQERAILVEGYMDVLALHQAGLTNAVASCGTALTRYQAKMLRH 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + +V+ YD D+AG+ + ++ +++ + + LP+G+DPD+ VR+EG++ F Sbjct: 302 YSEHVLFVYDADKAGQKSMMSGIDIL---VSEQMVPQVLMLPEGDDPDSFVRREGRQGFL 358 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E M F STP+ +A + + I+ +P R QEL K Sbjct: 359 QYAESHTMGFQDFQLAFFEAAGAFSTPEQKAEALRVMVRTIALIPKRAQRELYAQELSKK 418 Query: 419 LGILDDSQLERLMPKAAE---------SGVSRPVPQLKRTTMRILIGLLVQNPEL--ATL 467 +G+ + E L + S S P T + P L A Sbjct: 419 VGLTVTALRELLGNATSAVAKQQSCTPSKASATAPTSSSATNATSAPTIPHAPNLPNAQA 478 Query: 468 VPPLENLDENKLPGL 482 +PPL L++ L L Sbjct: 479 LPPLSVLEKTFLKAL 493 >UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HGK8_PEPMA Length = 598 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 142/438 (32%), Positives = 249/438 (56%), Gaps = 10/438 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRAGSNYVGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA + + ++ + R+ L+++ + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLADKLGI---LVETNEVNKEKYEHRKKLFEINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFYYKNLL--INDIPKEYIKKRNLNNNLINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G++ +++G YD+FR R+MFPI D RG VIGFGGR L KYLNSP++ + K Sbjct: 176 IEVGLINQDEKGNVYDKFRNRLMFPIIDIRGNVIGFGGRALAEARAKYLNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ + ++ + ++++VEGYMDV++L YG +YA+ASLGTS T D +L+ R Sbjct: 236 KNVYGVSNLK-NSTKVGKIILVEGYMDVISLTNYGFDYAIASLGTSLTHDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA+E + + +PD DPD +++ G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIEI---FKEQDISPNIIVIPDNMDPDDYIKQYGNESFNRLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AM + + ++ + D++ + +L L+S++ E +R ++ + L I Sbjct: 352 DNAMDSVIYEYKKILQKYDINDVKEKIQLIDDLTTLLSKLDREVIRDEYIKKFSDDLNIE 411 Query: 423 DDSQLERLMPKAAESGVS 440 S + + K E+ + Sbjct: 412 YVSLKKDVYNKLKETKPN 429 >UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 Length = 608 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 162/579 (27%), Positives = 284/579 (49%), Gaps = 25/579 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + I ++ AR DI +I + +K+ G N+ CPFH EKTPSF +N KQ Y CFGCG Sbjct: 17 KDIIEEIKARCDIASIISEYMNIKQSGANYKGLCPFHGEKTPSFYINTSKQIYKCFGCGE 76 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I+F+M + L+F++ V+ LA +E+ + ++I+ + + + F Sbjct: 77 GGDVINFVMKMENLDFMDAVKILANKCGIEIN-TNMNEETRIKIEKSKKFQDIHTEAARF 135 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y +L +YL RGL ++I +F +GF+ W++++ +Q L++ G Sbjct: 136 YLSNL-LGSKNLGYEYLRIRGLDDKIIKKFGLGFSLDSWNSLMNTLISKGYKKQDLLECG 194 Query: 187 MLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 ++ N G YD+FR RVMFPI D RG +IGFGGRVL + PKYLNSP+T IF+K + L Sbjct: 195 LIAKNRDGTNCYDKFRNRVMFPIFDYRGNIIGFGGRVLDDSLPKYLNSPDTLIFNKKQNL 254 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL A+++ E +++VEGYMD+++L QYGI VA+LGT+ T L+ R + I Sbjct: 255 YGLNFARKNL-ESKTIVLVEGYMDLISLYQYGIKNVVATLGTALTEQQGILIKRYADTAI 313 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG A RA++ G ++ + L D +DPD VRK G ++ M+ + Sbjct: 314 ISYDSDEAGIKATLRAIDILTKL---GINVKVLDLKDAKDPDEFVRKYGLSDYKKAMDVS 370 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 + + L + ++ + R + + A +I Q+ + + L N++ I +S Sbjct: 371 THYIKYKIDHLKKEFNIQKDEERVKFAKEASKIIKQLTSPVEIDFYTKYLSNQIDINVES 430 Query: 426 QLERL------------MPKAAESGVSRPVP---QLKRTTMRILIGLLVQNPELATLVPP 470 + K E V V K+ LI +++++ ++ + Sbjct: 431 IKREVYGKNYNKPYNNKNQKKIEEKVIEKVEVRQDGKQLVEETLIKIMLEDKKIREIA-- 488 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 L ++E+ L +E++N + L + + + L++L+ + Sbjct: 489 LLKVEESDF-LLKESKEILNYMIKNQELDKITIDKLKSLNISEEYLKELNSISLNSINLE 547 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 + + ++ + LE + L+ ++ +N+ + Sbjct: 548 NTKEIEGIITNIRKNSLEEQINSLLREQQELENNNDMKE 586 >UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 Length = 606 Score = 464 bits (1195), Expect = e-129, Method: Composition-based stats. Identities = 179/589 (30%), Positives = 291/589 (49%), Gaps = 23/589 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +I FI +L+A DI D++ V L K GKN+ ACCPFHNEKTPSF VN +K+F+H Sbjct: 1 MAKKISNNFIKELVANADIADVVSRYVNLTKSGKNYKACCPFHNEKTPSFFVNSQKRFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+A+ F+ + L+FVE V+ LA + V +E S + + Sbjct: 61 CFGCHESGDALTFVKKINNLDFVEAVKTLAEIVGKPVEYENYSQEDLHKEQLFNKCIGFL 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +Y+ +L A YL+KRG+ ++ F IG++ GW+NV + + Sbjct: 121 AIAQKYYRWNLGNSASKEKAVGYLKKRGIDSDLAKVFGIGYSSEGWNNVTQLAKSVNVSE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDI 238 LID G+ + ND+G YDRFR R+MFPIR+ +G VIG+GGRV+ + D KY+NSPET + Sbjct: 181 DILIDTGLAIKNDKGNVYDRFRNRIMFPIRNIQGNVIGYGGRVIDDSDGVKYINSPETIV 240 Query: 239 FHKGRQLYGLYEAQQDNAE-----PNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 F K LYGLYE ++ + L+VVEGYMDV+ LA+YG AVA+LGT+ + +H Sbjct: 241 FQKNNILYGLYEYREKKKQYPDLANQSLIVVEGYMDVIGLAKYGFYSAVATLGTAFSQNH 300 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 ++LFR +N+++ C+DGD AG+ A R ++ LP + ++LR + L G+DPD +++ Sbjct: 301 AKILFRESNSIVLCFDGDSAGQKAVVRTIKIILPILDGNKKLRILTLEHGKDPDDYIKEY 360 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G + F ++++ + F+ N ++ D+S + ++ + + + L Sbjct: 361 GLDNFNNSLKKSQSVLDFIINYIINNKDVSKAECKSEIVENLKEFLIDIDENIYTESLIS 420 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSR-PVPQLKRTTMRILIGLLVQNPELATLVPPLE 472 + K+ I + + L S + + K R+ +L++ LA + + Sbjct: 421 TVAEKININANQIKKLLKLGKQRSNIVNLDIDNYKYRQKRLSKSMLLEEVILAEIFVNIA 480 Query: 473 NL-------DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 + D LV + L E A L +L D Sbjct: 481 DFRMLLKENDFEIFATSKNLDILVKSLK--------ILKEDSSNEIEAVILIQLLAEDYP 532 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + + +N + + I ++ +N + +L L Sbjct: 533 DYREYFFELLSQGINKARKKSDGEQYCDQILKDLKRIEANSVKEQLNYL 581 >UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q07SS4_RHOP5 Length = 688 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 167/418 (39%), Positives = 245/418 (58%), Gaps = 4/418 (0%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++DL AR + D++ RVKLKK G+ + PF EKTPSF VN EKQ + F Sbjct: 21 RFTPQFLDDLKARLMVSDVVGRRVKLKKSGREWKGLSPFQQEKTPSFFVNDEKQAWFDFS 80 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G +G+ DF+M + ++F E VE LAA+ + +P + + + R++LY++M+ Sbjct: 81 SGKNGSIFDFVMQTEGVDFPEAVERLAALAGMALP--QATPDAARQERHRKSLYEVMELA 138 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ ++L AR YL R ++ +F +GFAP + + G + ++ Sbjct: 139 AAFFTETLAARGGARARGYLADRAIAPATQVKFRLGFAPADRFALKEHLGKHGIPVSDMV 198 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 +AG+L+ D YDRFR+RVMFPI D RGRVI FGGR + D P KYLNSPET +FHK Sbjct: 199 EAGLLIAGDDIPVPYDRFRDRVMFPITDIRGRVIAFGGRAMEKDVPAKYLNSPETPLFHK 258 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY L A+ + L+VVEGY+DV+A++ G VA LGT+ T + +QLL++ Sbjct: 259 GDNLYNLASARGAAHQGASLVVVEGYVDVIAMSAVGYAATVAPLGTALTENQLQLLWKMA 318 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + I C+DGD+AG+ AAWRA + ALPY+ G+ LRF LP+G+DPD L + G+ A + Sbjct: 319 DEPILCFDGDKAGQKAAWRAADLALPYLAPGKSLRFALLPEGQDPDDLAKLGGRAAVDEV 378 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A PL+ L++ +TP+ RA L L + + E +R Y RQ+LG +L Sbjct: 379 IGAARPLADVLWSREHGAGSFATPERRAALEARINELTNGIRDEVVRRYYRQDLGERL 436 >UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA Length = 620 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 162/579 (27%), Positives = 270/579 (46%), Gaps = 19/579 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I+D+ DI D++ V+L+K GKN CPFH+EKTPSF+V+ KQ +H Sbjct: 1 MAGMIPEDVIDDVRTSVDIADVVGRYVQLRKAGKNLFGVCPFHDEKTPSFSVSESKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLE-VPFEAGSGPSQIERHQRQTLYQL 119 CF CG GN FLM+ + L F E+V +A N+ S ++ L L Sbjct: 61 CFSCGRGGNVFKFLMDLENLSFPESVRRVAEFGNIPLDQSYFKSTKKSSYTSEQSALIDL 120 Query: 120 MDGLNTFY-QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + + L + A QYL+KRG++ + I F IGFA P + +L F + + Sbjct: 121 YEKASELFSHILLNTKLGEDALQYLKKRGMTEDDIKNFDIGFAAPEDNLLLSFFKEHKID 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + + ++G+ + ++ DRF R++FPI+D G+++ F GR L + PKYLNSPET Sbjct: 181 QHLMAESGLFIESENQTLRDRFFNRIIFPIKDTNGKIVAFSGRSLVKDKNHPKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+KG+ LY +A+ + + +++ EG+MDV+A + + +A++GTS T DHI Sbjct: 241 SIFNKGKVLYNFSQARSEIIQQKTVILYEGFMDVIAAHRAAVKNGIATMGTSLTEDHINA 300 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 + R + VI C+DGD G+ A RA+E + Q+ +F+PD DPD V + G Sbjct: 301 IKRVADRVIICFDGDAPGQKAIARAIELL--RQSSDLQISVVFIPDNLDPDEYVNQRGTA 358 Query: 357 AFEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF+ M+Q ++FL ++L+ + + AL IS + + +L Sbjct: 359 AFQNLMQQTGESSTSFLLKYDRTGLNLANENDQLEYLKRALKRISSLKDALEQDLYLNQL 418 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 ++ I ++L A+ P +M P + + Sbjct: 419 SDEFKIDKRDLKDQLRESVADRIAHAPKQFELEASMP---------PPPPEAMGDQPVFN 469 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD---KNIAE 532 +N L L++ L+ N EKL +A + E Sbjct: 470 QNIQKKLSKIDISEYRLLARALNNHDVWLKLQSLPNFYFPNEKLETIYVLASGYLEKNHE 529 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 D ++++ + L+ ++ + + + EE + Sbjct: 530 YNVADFMDYLKEDELQAVVADIESINLSPEFTEEEIQDY 568 >UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW33_CHLT3 Length = 642 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 157/558 (28%), Positives = 253/558 (45%), Gaps = 10/558 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I+++ DIVD++ V+L++ G NF A PF +EKTPSF V+ EKQ Y CF Sbjct: 2 RIPEEKIDEIRRNLDIVDVVSDYVQLRRAGSNFKALSPFTSEKTPSFIVSPEKQIYKCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLE-VPFEAGSGPSQIERHQRQTLYQLMDG 122 G GN F+M +K+ F++ V+ LA + FE S + + Y + Sbjct: 62 TGKGGNVFTFVMEMEKIGFIDAVKMLAPRAGVSLAEFERHSPDAAAPSDPNEEYYNTLTW 121 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++ P + Y +RG+ E I+ F +G+A WD + + + + L Sbjct: 122 SAKFFHSAMNLPEGKTCYDYFRERGILPETISAFGLGYAFDDWDKLHHAAQKDGISSEIL 181 Query: 183 IDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 + G++ ++G + YD FR R MFPI G+V+GFGGR+L D PKY+NSPE+ I+ Sbjct: 182 SELGLIKYTEKGQKYYDAFRARAMFPIFSPGGKVVGFGGRILTGQKDAPKYINSPESKIY 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + L+ + A+ + ++VEGYMDV++L Q GI AVAS GTS T + +LL R Sbjct: 242 EKSKILFAMNFAKDEIRRREEAILVEGYMDVISLHQVGIKNAVASSGTSLTTEQARLLKR 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T N++ YDGD AG A R ++ + +G + LPDG DPD+ VR+EGK+ F Sbjct: 302 YTKNILFIYDGDAAGIKAMMRGIDVLIE---EGLHASVLTLPDGNDPDSFVREEGKDTFL 358 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++ F L +P+ L +S++P E +EL K Sbjct: 359 SFIKAHRSSFLDFKLQVLENDGGFESPEATTESIRALLESLSKLPDELALEMYLKELSQK 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 L + + + L P + L PE A + ++ E Sbjct: 419 LDVGLSTVQKELGKIQNRRRKPSRQPMPSSYPVEAFPEPL-PLPEQAPPDEEIVSVAERT 477 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ-TFTD 537 L + + + ++ L+ ++ + + + Sbjct: 478 FLKAFLESTYHGFTVLEFVDSHKEIFNFRHDWTRLIVDFMLARYEHAKAADSLQNFDLPN 537 Query: 538 SLNHMFDSLLELRQEELI 555 LN++ D L+ Sbjct: 538 ELNYLDDEAARNFISSLL 555 >UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 RepID=B0S1K2_FINM2 Length = 595 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 139/447 (31%), Positives = 250/447 (55%), Gaps = 13/447 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRSGSNYIGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA + + ++ + R+ L+ + + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLADKLGI---LVETNEVNKEKYEHRKKLFAINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFFYKNLL--INDVPKEYIKKRDLTNSMINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G+ +++G +D+FR R+MFPI D RG +IGFGGR L + KY+NSP++ + K Sbjct: 176 IEVGLANQDERGNIFDKFRNRLMFPIIDIRGNIIGFGGRTLADAKAKYMNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ + ++ + ++++VEGYMDV++L YG ++A+ASLGTS T D +L+ R Sbjct: 236 KNVYGVSNLK-NSTKVGKIILVEGYMDVISLTNYGFDFAIASLGTSLTYDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA++ + + +PD DPD ++K G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIQV---FKEIDISPNIIVIPDNLDPDDYIKKYGNESFNKLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AM + + ++ + D++ + +L L+S++ +R ++ L I Sbjct: 352 DNAMDSIIYEYKKILKKYDINDVKEKIQLIDDLTTLLSKLDRAVIRDEYIKKFAEDLQID 411 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRT 449 D+S + K V++P + R Sbjct: 412 DNSLRTDVSDKL---SVAKPNISVNRE 435 >UniRef50_A6LD21 DNA primase n=12 Tax=Bacteroidales RepID=A6LD21_PARD8 Length = 705 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 138/472 (29%), Positives = 237/472 (50%), Gaps = 10/472 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ +L +IVD++ V L+K+G N+ CPFH++K+PSF V+ K CF Sbjct: 1 MIDQPTIDRILDAANIVDVVSEFVTLRKRGINYVGLCPFHSDKSPSFYVSPSKNICKCFA 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G A+ F+M +++L + + + LA +N+E+ + + R R+++ + Sbjct: 61 CGEGGTAVHFIMKHEQLSYFDALRFLAKKYNIEIQERELTEKEKQIRSDRESMLIVNSWA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L + V +Y +RGL ++I +F +G++ D + K ++ Sbjct: 121 GQYFSTLLHEHVEGKSVGMRYFAERGLREDIIRKFQLGYSLDQRDALYKTAIKAGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L G+++ D G DRFR RV+FP+ G+V+ FGGRVL D KY+NSPE++I+ Sbjct: 181 LEKTGLVIAYDNGNVNDRFRGRVIFPVHTLSGKVVAFGGRVLKKDEKTAKYVNSPESEIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK +LYG+Y A+Q + +R +VEGYMDV+ + Q G+ VAS GT+ T I+L+ R Sbjct: 241 HKSNELYGIYFAKQAIMKQDRCFLVEGYMDVIGMHQVGVENVVASSGTALTQGQIRLIHR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TNN+ YDGD AG AA R ++ L +G ++ + LP GEDPD+ R F Sbjct: 301 FTNNITVLYDGDAAGIKAALRGIDMLLE---EGMNVKVVLLPAGEDPDSFARSHSASEFA 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + + F L+ + P R+ L + + ++ +P R +E Sbjct: 358 EFISQNETDFIRFKTKLLLAEAG-GDPIKRSALISDIIRTVAIIPDNIARSVYIRECSTT 416 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRT-TMRILIGLLVQNPELATLVP 469 + I + L + ++ ++ T ++ + + + P+ P Sbjct: 417 MEIDEQVLLNEVNKIRLNKEENQAAKSVRNTPPVQSPVNTIPEYPDFPGYQP 468 >UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESS6_AMOA5 Length = 640 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 167/582 (28%), Positives = 275/582 (47%), Gaps = 31/582 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + + I + I +++ V LKK+G+N ACCPFH+E+TPSF+V+ K FY CFG Sbjct: 1 MLNQETIQAVQQAALIEEVVGDFVTLKKRGQNLWACCPFHHERTPSFSVSPSKGFYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C A G++I F+ + + F+E V+ LA +++ + +H+R +LY LM Sbjct: 61 CDAAGDSIAFIKAIEGISFIEAVKYLATKYSIPIQETEEGHKDIAAQHERDSLYILMKLA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 N +Y Q+L + YL++RG++ + I +F +G++ W + Sbjct: 121 NNYYIQNLWEHSEGQRIGHAYLKERGITDDFIKQFELGYSLDSWQGFHEYALKQGYTDGL 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIF 239 L AG++V N + + YDRFR RV+FPI + G+VI F R+L ++ PKY+NSPET I+ Sbjct: 181 LEKAGLIVHNQE-KLYDRFRGRVIFPIHNLSGKVIAFAARILKPADNQPKYVNSPETPIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYG+Y+A+Q + ++ +VEGY DV++L GI VAS GT+ T IQL+ R Sbjct: 240 HKSDVLYGIYQAKQKIKQVDKCFLVEGYTDVISLHMAGIENVVASSGTALTDSQIQLVSR 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +DGD AG AA R ++ L G ++ + LP GEDPD+ +K AF+ Sbjct: 300 FTKHITVLFDGDTAGIKAALRGVDKILE---KGLHVKVILLPPGEDPDSYSKKLDSLAFQ 356 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + E F LM + P +A L I+ +P R Q+ Sbjct: 357 TYLQEHEQDFITFKAKLLMEGIG-DDPTQKAEAIKEILQSIALIPDAVNRTLFLQQCSRL 415 Query: 419 LGILDDSQL----ERLMPKAAESGVS-----RPVPQLKRTTMRILI-----GLLVQNPEL 464 L I + L + L+ K E PV +L+ T R + ++ E Sbjct: 416 LDINEGVLLGEHNKILVRKEKEHHRPHKLVHNPVNELQLTAKRGELIPLNWAATIEAYEQ 475 Query: 465 ATLVPPLEN----LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 ++ L L++ L +EL + P +L Y + ++ Sbjct: 476 ESIRLLLNYGSIILEDGNPLSTYLLQELADVPFQHP--VYKHILSTYEELALQEQVIDIN 533 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG 562 + D+ ++T D ++ + +++ I + Sbjct: 534 FFVQHTDER-IQKTAIDLTASPYEVSDKWQEKYQINISKEED 574 >UniRef50_C9PY41 DNA primase n=8 Tax=Prevotella RepID=C9PY41_9BACT Length = 660 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 137/455 (30%), Positives = 232/455 (50%), Gaps = 12/455 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I + +IVD++ V L+K G N+ CPFHNE+TPSF V+ + HCFG Sbjct: 1 MIDRATIEKIQEAANIVDVVSEFVTLRKAGANYKGLCPFHNERTPSFMVSPARGICHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G + F+M ++++ + E + LA +++E+ S + E+++R++++ + + Sbjct: 61 CGKGGTPVSFIMEHEQMTYPEALRWLANKYHIEIKERELSDDERREQNERESMFIVNEWA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ +L V A QY RG ++I +F +GF + + + N Sbjct: 121 AKHFEDTLHTNVDGLAIGMQYFRSRGFRDDIIRKFRLGFDLNDRELLARTAIDKGYNVDF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ D GR DRF RV+FP G+V+GFGGR+L T KY+NSP++D Sbjct: 181 LVKTGLCYRTDDGRYVDRFAGRVIFPWFGVSGKVVGFGGRLLDTRTKGVQQKYVNSPDSD 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK +LYG+++ ++ A+ + + +VEGY DVV++ Q G+ VA+ GT+ + I L Sbjct: 241 IYHKDHELYGIFQGKKAIAKEDCVYMVEGYTDVVSMHQCGVENVVANSGTALSVHQIHTL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+N++ YDGD AG AA R + L +G ++ + PDG+DPD+ RK E Sbjct: 301 HRFTSNIVLLYDGDAAGIHAALRGTDMLL---AEGMNVKVLLFPDGDDPDSFARKHNAEE 357 Query: 358 FEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F + + F L+ V + P R+ + + +S +P + LR + Sbjct: 358 FRQYIADNQTDFIQFKTRVLLDGV--TDPTRRSEAISSIVQSVSVIPDQILRDTYLHDCS 415 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM 451 +LG+ + + + + ES R + Sbjct: 416 QRLGVAETTLINSMNRYIRESRERRSTEASRAVQE 450 >UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5_9RHOB Length = 675 Score = 461 bits (1187), Expect = e-128, Method: Composition-based stats. Identities = 186/634 (29%), Positives = 291/634 (45%), Gaps = 83/634 (13%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F++++ R + D++ +V K+ GK + A CPFH+EKT SF V+ K +Y Sbjct: 3 LPTGFLDEIRNRLSLADVVGRKVLWDKRKSQPGKGDLWAPCPFHHEKTASFHVDDRKGYY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC G+AI F+ + + F+E +E LA +E+P + +R R L ++ Sbjct: 63 YCFGCHEKGDAISFVQKTENVGFMEAIEILATEAGMEMPARDPQAKQKADR--RTILGEV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ F++ L+ AT AR YL KRGL RF IGFAP GWDN+ G + Sbjct: 121 MEQAVQFFRFQLKTQAATDARAYLAKRGLDAGTQERFEIGFAPAGWDNLRLALTGKGVSV 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETD 237 + L+ G+ T+D+GR YD FR R+MFPIRD RGR I FGGR + +D KYLNSPET+ Sbjct: 181 EHLVACGLSKTSDKGREPYDVFRNRIMFPIRDARGRCIAFGGRAMDPDDNAKYLNSPETE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F K R LY L A++ L+V EGYMDV+AL++ G AVA LGT+ T + + + Sbjct: 241 LFDKSRNLYNLRAAREATGRGQPLVVAEGYMDVIALSEAGFKGAVAPLGTAVTENQLHAM 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + I DGD+AG AA+R ++ ALP + G+ LRF +PDG+DPD L+R +G +A Sbjct: 301 WRLSPEPIIALDGDKAGLRAAYRVIDLALPLLEAGKGLRFALMPDGKDPDDLIRSDGPDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + ++ A+P+ L+ +P+ RA L + + +V +LR + + + Sbjct: 361 VQTCLDAALPMVDLLWQQETEGRSFDSPERRAALDKVLRERVQRVKDPSLRRHYGEAVRE 420 Query: 418 KLGILDDSQLERLMPKAAES-----------------------------------GVSRP 442 L D R + AE P Sbjct: 421 LL----DKLYNRAGVQPAEPWNGGNGGGFSGGFSGGFAGGFSGKGKGARGRRKWNAPEPP 476 Query: 443 VPQLKRTT-------------MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV 489 P K + I++ +L +P L + P L R+++ Sbjct: 477 SPTAKASMLVARGEDAEVVMRQEIVLAILYHHPTLIEAFDGQLEKLTPRDPDLAALRDVL 536 Query: 490 NTCLSQPGLTTGQLLEH----YRGTNNAAT---------------LEKLSMWDDIADKN- 529 +P +E + T AA L ++++ +++A Sbjct: 537 LDMADRPERLADAAMERIGAGWLETLLAARHIAVVPCIRSQGAKDLARMTVAEELAKLEA 596 Query: 530 --IAEQTFTDSLNHMFDSLLELRQEELIARERTH 561 + ++ + D E L R Sbjct: 597 YHGWQAELREAEEDLDDLADEALTWRLAEAARAR 630 >UniRef50_C8XHB5 DNA primase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHB5_NAKMY Length = 648 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 168/622 (27%), Positives = 265/622 (42%), Gaps = 62/622 (9%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHC 61 GRI + + I ++ V L+ G N CPFH+EKTPSF V+ + +YHC Sbjct: 2 GRITDADRERVRDASRIEQVVGEYVALRNAGGGNLKGLCPFHDEKTPSFQVSPARGYYHC 61 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCG G+ FL D+L FVE+V+ LA + + G ++ ER R L + Sbjct: 62 FGCGKGGDVFSFLQEIDQLTFVESVQRLAERAGIALTLVEGGSSTRTERGTRPRLLAVNK 121 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY + LQ P A AR +L +RG A F G+AP GWD ++K G + + Sbjct: 122 AAAAFYAEQLQTPGAQVARDFLAERGFDLAAAAHFGCGYAPDGWDELVKALTGQGFSVEE 181 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSPETDI 238 L AG+ +G D+F R+++ IRD G V+GFG R L +D KYLN+ ET + Sbjct: 182 LYRAGVARQGQRG-PIDQFHRRLLWSIRDAAGDVVGFGARRLFDDDRVQAKYLNTSETPL 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K + L+GL A+++ + +++VVEGY DV+A+ G+ AVAS GT+ +HI +L Sbjct: 241 YKKSQVLFGLDLAKREIIKQRKVVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHISVLR 300 Query: 299 RATNN--------------VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGE 344 R + V+ +DGD AGR AA +A ++ + + +G Sbjct: 301 RYLLDSQAGPGTMRARDGMVVYTFDGDAAGRQAALKAFDSDQRFAAN---TYVAIEKNGL 357 Query: 345 DPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPG 404 DP L + +G EA ++ A L F S + Q +L + +G +PL++++ Sbjct: 358 DPCELRQAKGDEALRELVDSARNLFEFAIASAVGQFNLDSAEGGYAALNAGVPLVARIKD 417 Query: 405 ETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKR---------------- 448 + LR + L G ER+ +AA++ P P+ +R Sbjct: 418 DLLRDQFAKTLAMHAGTDIQETRERV-RRAAQTRAQAPDPEPRRRPESRAGERQRSDPEP 476 Query: 449 -------------------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV 489 T R + L +Q P L + + + P + Sbjct: 477 PPEPEPPDLDWPDPRDRELTAEREALKLALQQPALVASAYGMIEAEVFRAPAYATVHRAI 536 Query: 490 NTCLSQPGLTTG-QLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLE 548 + G +G ++ RG L L + S+L Sbjct: 537 SALGGPSGDRSGPAWVDEVRGELPEGRLRSLVTELAVERPEWLSDEVD---ARYAGSILA 593 Query: 549 LRQEELIARERTHGLSNEERLE 570 E R+ +S +R E Sbjct: 594 RLAERQAIRQEKRLISALQRAE 615 >UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_PELTS Length = 630 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 184/580 (31%), Positives = 275/580 (47%), Gaps = 27/580 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP I + +DIV+++ V L+K+GK F CPFH++++PSFTV +KQ +HCF Sbjct: 2 GFIPDDIIETVRLNSDIVEVVSRYVSLRKKGKYFTGSCPFHSDRSPSFTVTPDKQIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC A G+ FLM + L F E V LA + +P + +R ++ L ++ D Sbjct: 62 GCNAGGDVFKFLMLKENLTFYEAVSMLARRAGIALPAREDPAGPERDR-KKALLQRINDL 120 Query: 123 LNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 F+ ++L+ A AR+YL +RGLS EV+ RF IGFA PGW +L Sbjct: 121 AKDFFYENLRRHEAAAEARRYLAERGLSGEVLDRFQIGFALPGWSALLDFLSRKGCQPHD 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +AG+ V D GR YDRFR R++FPI D GRV+GFGGRVL PKYLN+PET F K Sbjct: 181 AAEAGLAVKGDSGRYYDRFRNRIIFPIWDPVGRVVGFGGRVLDGSLPKYLNTPETPFFSK 240 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LYGL+ A+ E + +VVEGYMD V +G VASLGT+ TA+ +LL + Sbjct: 241 GRILYGLHLARPAIRERDCAVVVEGYMDAVTAHLHGAANTVASLGTALTAEQGRLLINYS 300 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 NV+ YD D AG AA R ++ G Q+R +PDG+DPD +R++G +++E Sbjct: 301 RNVVIAYDADAAGVAAAMRGMDLLQEL---GFQVRVATIPDGKDPDEYIRRQGIQSWEKL 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +A L + M + + T G+ + P ++ + E + + + L + Sbjct: 358 IGEAPSLIEYKLQKAMEKGPVRTVTGKLEVMRQVFPNLA-LKNEVEKEEGLKAIAGALNL 416 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRTTMRI-----------------LIGLLVQNPEL 464 ++ A G P T L+ L++++P L Sbjct: 417 TWETVAGEFKRFEANLGKKWANPDNIVKTKHNILSKEEKLDHRGKLEIGLLRLVLEDPSL 476 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDD 524 T V + + P EL +P ++ L L D Sbjct: 477 GTHVVEEMGPEPFRNPQYQKIFELCRNAAGRPVFRPAEIFSSLEDDEK-NVLSFLLTQD- 534 Query: 525 IADKNIAE--QTFTDSLNHMFDSLLELRQEELIARERTHG 562 I +N+ + + DS+ + IA+ G Sbjct: 535 IPGENLVQIMKNHIDSIRRFERRERREALLKEIAKAEKAG 574 >UniRef50_B0SHG4 DNA primase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHG4_LEPBA Length = 603 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 162/578 (28%), Positives = 260/578 (44%), Gaps = 24/578 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + F + I I+ V L++ G+N CPFHNEKTPSF VN E FYHCFGC A Sbjct: 5 QSFKERVRREVSIDSYINRFVPLRRMGRNLVGICPFHNEKTPSFNVNPEGGFYHCFGCKA 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ F+M+Y K++F++++E L+ + P + + +++ LYQ+ + Sbjct: 65 SGDLFRFVMDYQKVDFLKSLEVLSEYSGI--PLVERTKEEEESERKKEALYQISQKALEY 122 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 +Q++L A +YLE RG+ E + F IGF PG+ N+ + G Sbjct: 123 FQKNLNTTAGELALKYLESRGMYAEDLKVFKIGFGLPGFGNLRSELFKTDAEVKLGEQLG 182 Query: 187 MLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKGRQ 244 +L DQ + YD FR R+MFP+ D RGRV+ F GR+LG + KY+NSP + I+ K R Sbjct: 183 LLKRQDQNKDPYDFFRNRIMFPVIDPRGRVVAFSGRILGESEEAKYINSPNSLIYDKSRT 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 Y L AQ + ++VEG D + L + GI + VA LGT T H+++L + V Sbjct: 243 FYNLNLAQDSIRKTREAVIVEGVFDAIGLFRKGIEFVVAPLGTGFTEGHVRILKNMADKV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 D D+AG A+RA+ +G ++ +P+G+DP K+ +E Sbjct: 303 YLMMDSDKAGTKGAFRAVNLL---SKEGVVVKVCHIPEGKDPFDYSLHHNKQEIRELLEG 359 Query: 365 AMPLSAFLFNSLMPQVDLST-PDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A P S F+ ++ ++ + + + + ET + +E +LG+ Sbjct: 360 ASPASQFMIREILAGAGPTSLAEEKQAGVKKLFEFLKPMEKETDKQVYLEEGARQLGLSF 419 Query: 424 DSQLERLMPKAA-------------ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 S + K + P R +I +L+QN EL + Sbjct: 420 SSLFQDFRGKPGVTSTPSVVDTKKDRTPQKPGKPSPVLVCERKMIAMLIQNLELFSFADD 479 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 L +L+ + L L LT ++L R + L ++ AD ++ Sbjct: 480 LLSLEFRDEVSAFFWDYLYTKYLQNENLTAAEILS--REEIPSEYLGMIAE-HFSADVSV 536 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER 568 TF + D L + R EEL+ L+ EE+ Sbjct: 537 TPATFRAMFLYHADLLDDARMEELVKEMAKPDLTIEEK 574 >UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 Length = 635 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 167/559 (29%), Positives = 273/559 (48%), Gaps = 34/559 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I ++ R DIV++I V LKK+G++ CPFH+EK+PSF+V+ KQ Y+CFG Sbjct: 5 RLHPDTIQEIKQRIDIVEIIGDYVVLKKRGRDHLGLCPFHDEKSPSFSVSPAKQMYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMD 121 CGA GNA +FLM K F + +LA + +++ + +++R R+ LY++M Sbjct: 65 CGAGGNAFNFLMELGKRSFTDVALDLARRYQIQIQTLEPAQKQELQRQLSLREQLYEIMA 124 Query: 122 GLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 FY +L QP A YL +KR LS I F +G+AP GW+ + + Sbjct: 125 VAAGFYHHTLFQPQGQEALTYLDQKRCLSSATIQEFQLGYAPAGWETLYRYLVEQKRYPV 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 ++ AG++ G YD+FR R+M PIRD +G+ I FG R LGND PKYLNSPET + Sbjct: 185 AAVEQAGLIKARQSGTGYYDQFRHRLMIPIRDVQGKTIAFGSRTLGNDEPKYLNSPETPL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK + L+GL +A+ + + ++VEGY DV+AL + GI VA+LG + + D +Q L Sbjct: 245 FHKSKTLFGLDQAKTAIQKVDEAILVEGYFDVIALHESGIKQTVAALGIALSRDQVQSLM 304 Query: 299 RA--TNNVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVR--KE 353 R + +I +D D+AG +A RA++ P + G+ LR + LP G+D D + E Sbjct: 305 RFSQSKQIIFNFDADKAGINATQRAIQEIEPLVYSGQVNLRILNLPAGKDADEFIHSSAE 364 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 KE ++ ++QA + L+ Q +L P +++ + ++ ++ + R Y Q Sbjct: 365 NKEIYQTLVKQAPLWVDWQIQQLLKQKNLKDPLDFEQVARGMVDILKRLTDQNKRAYYLQ 424 Query: 414 ELGNKLGILDDSQL--------------ERLMPKAAESGVSR-PVPQLKRTTMRILIGLL 458 G L D + +R + ++ P L +L+ + Sbjct: 425 LCGEILSQGDSRLISLQVNNLSSQLTYGDRPGKNGSRHWQAKDPTSSLLEKAEALLLKIY 484 Query: 459 VQNPELATLVPPLENLDE--NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 + P+ + + ++ L + ++ L + N L Sbjct: 485 LHCPQERPTIDQILTENDLLFSFAHHRLLWQKIDQVREYFNLDS-------DPDNQLPLL 537 Query: 517 EKLSMWDDIADKNIAEQTF 535 +L+ + D N E F Sbjct: 538 VQLAYLEQEGDFNSVESLF 556 >UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRM9_DESBD Length = 567 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 173/582 (29%), Positives = 268/582 (46%), Gaps = 26/582 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + I + AR I D+I V+L+ G A CPFH E PSF+VN E FY+CFGC Sbjct: 4 FDQGLIAQIKARLRIEDVIGRHVELRPAGNRLVAPCPFHQETKPSFSVNPEGGFYYCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE-AGSGPSQIERHQRQTLYQLMDGL 123 A G+ I+F + LEFVE VE LA LEV P +I R Q ++ L Sbjct: 64 QASGDIIEFYRAINGLEFVEAVEALAREAGLEVRRRPEYMAPGEISRSQCLDMHAL---A 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY++ L + +AR Y+ +RGL+ E++ RF +G+AP GW+ + G Sbjct: 121 AVFYREVLGRAPGQAARDYIARRGLASEIVERFCLGWAPAGWNELRDHLRGRGFPEAVAE 180 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKG 242 AG++ + +G YDRFRER++FPI + + + FGGR L D PKYLNS ET I+ KG Sbjct: 181 KAGLVSKSAKGSYYDRFRERLIFPIMNLSAQTVAFGGRSLVDGDGPKYLNSSETPIYTKG 240 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 LYGLY+A++ + +L+ EGY+DV++L Q+G + LGT+ T + + L Sbjct: 241 EHLYGLYQARRAMSHSKSVLLTEGYVDVLSLHQFGFENSCGVLGTALTPEQVHRLSGLVG 300 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V +DGD AGR AA R+ E L T G + R + +P+GED D++++K G+E+ Sbjct: 301 QVDLVFDGDNAGRKAALRSAEMIL---TQGLKCRVLLMPEGEDVDSVLQKNGRESLLELS 357 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 QA+ + L + A +S++ + Y +L LG+ Sbjct: 358 AQAVDGLDYCLRQLSANQSPKD------VLNWATGFMSRLKKLDWKSYYLPKLAAGLGLS 411 Query: 423 DDSQLERLMPKAAESGVSRPV--PQLKRTTM-RILIGLLVQNPELATLVPPLENLDENK- 478 + L K A++ S P Q K + + + L+ V+ PE + L + Sbjct: 412 ETELRRTLGEKGADATASAPARLEQCKPSQLDKNLLAFAVRFPEYHGQLHELGLGEALAT 471 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE-QTFTD 537 G + ++ G++ ++L ++ D D +E D Sbjct: 472 ERGRIFWSKIF-------GVSPHEVLSRMDQGEKQFYVQCQMRTDVTVDDGRSEWDEVQD 524 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 L + + R G EE L + + Sbjct: 525 FLRQTGQRRDLESLNSGLRKARQSGDFQEELRLLALIQAKTQ 566 >UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX2_9BACE Length = 596 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 163/569 (28%), Positives = 257/569 (45%), Gaps = 41/569 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI++L+AR++I D++ + V L K+G N CPFHNEKTPSF+VN +KQ YHCFGC Sbjct: 3 IPEQFIDELVARSEISDVVSSYVTLNKKGSNLWGLCPFHNEKTPSFSVNQDKQIYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G I F+M + L F + V LA LEVP +G R +R + Sbjct: 63 GKGGGVISFIMEIENLSFPDAVRFLAKRAGLEVP---DTGSDDAGRKKRARALEANKDAA 119 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY L+ P R+Y+ +R +S RF +G AP WD + K ++ LID Sbjct: 120 RFYHDYLKGPGGARVREYIAQRQISPRTATRFGLGAAPDQWDALTKALTAKGYSKMELID 179 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGR 243 AG+ V G YD+FR R+M P+ D RG V GF R+L G + KYLN+PET +F KGR Sbjct: 180 AGLAVAGKNGGIYDKFRARLMLPVIDVRGDVAGFTSRILPGEEGAKYLNTPETVVFKKGR 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +Y L A+ N + L++VEG +DV+ L Q G + VA++GT+ T +H ++L R T Sbjct: 240 LIYALNFAK--NTKRPNLILVEGNIDVITLHQAGFDNVVATMGTALTEEHARILARYTKE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD---------GEDPDTLVRKEG 354 ++ CYD D AG+ + R L +R + LP+ +DPD +++ G Sbjct: 298 LVLCYDNDPAGKKSTDRVLGIL---KNADLNVRVLQLPNAYDSEGNPLKQDPDDFIKRFG 354 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL--- 411 AFE + + + + SL+ + L+ +GR A+ ++ + R Sbjct: 355 AAAFEKCLNGSAGQNDYRLESLLQKHSLADEEGRMAFLREAVETVASLQSPIEREIYGNK 414 Query: 412 ------------RQELGN-KLGILDDSQLERLMPKAAESGVSRPVPQLKRT-------TM 451 QE+ + ++ ++ + +P + R Sbjct: 415 AAAAGGISAAAFAQEVERYRKNRAWQAKKKQTRKDLTPAAQLQPRERELRYENIRSARAE 474 Query: 452 RILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 ++ L++ P L LE + ++ L L Sbjct: 475 EGVLRLMLLEPGLFQSAGALEPEQFSSPLLGRVYGMLRTRWQEGRSTQLPALTGELTADE 534 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLN 540 + + L + +A A + + + Sbjct: 535 MSHLVHVLDQPESLAHSQKALADYIEIIA 563 >UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteriaceae RepID=C7MNL3_CRYCD Length = 642 Score = 460 bits (1184), Expect = e-128, Method: Composition-based stats. Identities = 179/534 (33%), Positives = 268/534 (50%), Gaps = 20/534 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I I + A TD+V L RV L+++G++F CCPFH+EK+PS ++ Q ++CFGC Sbjct: 7 ISDEDIQKVRAATDLVSLFSERVPLRQRGRDFWCCCPFHDEKSPSCKIDPATQQFYCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 HG+ F+M + ++F + V LA ++E+ G G + R ++ L + Sbjct: 67 HEHGDVFSFVMKTEDIDFPDAVRRLADRAHIELHESGGRG--GVSRSYKERLRGVCQETR 124 Query: 125 TFYQQSL---QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY Q L + P A +AR YL RGL +V A + +GFAP G +++ + Sbjct: 125 DFYHQQLMRLKSPEADAARSYLASRGLGGQVPAHWHLGFAP-GHGVLMRHLRSRGYTVKE 183 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 ++DA ++V+ D DRF R+MFPI D++G I FGGRV+G+ PKYLNS +T +FHK Sbjct: 184 MVDANVVVSRDNATPRDRFFNRIMFPIHDEQGECIAFGGRVVGSGEPKYLNSQDTPLFHK 243 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L+GL A+ + +VVEGY DV+AL++ G+ VA+LGT+ T HI+ L R Sbjct: 244 SNILFGLDAAKAAMTASGQAIVVEGYTDVIALSEAGVKNVVATLGTALTTQHIRSLSRHA 303 Query: 302 -NNVICCYDGDRAGRDAAWRALETALPYMT-DGRQLRF----MFLPDGEDPDTLVRKEGK 355 VI +DGD AG+ A RAL MT + ++R LPDG DP V K G Sbjct: 304 GQRVIYLFDGDEAGQRATDRALGFIDESMTPEAGKVRIDLLACTLPDGLDPADFVDKYGA 363 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 + A ++QA PL AF + + Q DLSTP+GR AL L++ + L ++ Sbjct: 364 DELRAELKQAKPLIAFGIDRHLAQFDLSTPEGRTAAFADALALLAPIKDSLLAQDYAVQI 423 Query: 416 GNKLGILDDSQLERLM----PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 +L +D LERL P+ A+ S + R + L P+ + V P Sbjct: 424 AGRLHFREDDALERLSRLQPPRRAQVASSSSSSRNADHQDRQV--ALSSQPQTTSSVKP- 480 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 L +++ L+ C P LT + TN L + + Sbjct: 481 AALPQSERTRRRFEAALIRVCAHHPHLTLTH-ADALAQTNWHEALHAQAADALL 533 >UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_SYNJB Length = 646 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 174/528 (32%), Positives = 271/528 (51%), Gaps = 34/528 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G +P FI + + D+V+++ +V L+KQGKNF CPFHN+ PSF V+ KQ Y Sbjct: 1 MSG-LPPDFIQLVRQKADLVEVVAEKVVLRKQGKNFVGLCPFHNDHKPSFQVSPSKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP-----SQIERHQRQT 115 CF CGA G+ + F+M + L F E V LA +++ +P + E R+ Sbjct: 60 CFSCGAGGDVLRFVMQTEHLSFAEAVRHLARRYHIPLPTRNPEAQPLGSLDERELSHREK 119 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L +++ FY+ +L+ + ++ARQYL R LS E + +F IGFAPPGW ++ + + Sbjct: 120 LLEILAMAADFYRHALRSQLGSAARQYLHSRHLSEETLQKFQIGFAPPGWQSLYEYLVNH 179 Query: 176 PENR-QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLN 232 + L +AG+LV QG YDRFR R+M PI D +GRVIGF GR LG PKYLN Sbjct: 180 KRQPVKLLEEAGLLVPRQQGSGHYDRFRNRIMLPIFDVQGRVIGFAGRALGESGQPKYLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET++F+K + +YGL A+ A+ +++LVVEGY DV+AL Q G+ YAVA++GT+ T Sbjct: 240 SPETELFNKSQVVYGLNFARDAIAKADQVLVVEGYFDVIALHQAGVAYAVAAMGTALTPH 299 Query: 293 HIQLLFRAT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTL 349 ++ L R T +I +D DRAG +AA RA+E G +LR + LP+G+D D Sbjct: 300 QVKTLLRYTQSKRLILNFDADRAGLNAASRAIEAIEEQARRGEIELRILTLPEGKDADEF 359 Query: 350 VRKEGKEA--------FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 +R+ A + +EQA + ++ DLS + + L++ Sbjct: 360 LREYKSSAPPTRAVAELQTLIEQAPLWLDWRIEQVLAGRDLSRATDFQQARQALVQLLAG 419 Query: 402 VPGETLRIYLRQELGNKL----GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI---- 453 + G+ R ++ L G L E L + ++P ++ Sbjct: 420 LGGQ-WRSLYLHKVAELLSRGNGRLSRDLEEDLRRAVRQYRWAKPQQPSLNKGSKLLQSE 478 Query: 454 --LIGLLVQNPELATLVPPLE---NLDENKLPGLGLFRELVNTCLSQP 496 L+ + + E + L + P L++ ++ +QP Sbjct: 479 SHLLQIFLHFGEYRHEIRQTLLERELQFSFRPHRELWQRILELISAQP 526 >UniRef50_D2NNW9 DNA primase n=2 Tax=Rothia mucilaginosa RepID=D2NNW9_9MICC Length = 686 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 153/462 (33%), Positives = 231/462 (50%), Gaps = 13/462 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I + I+++ ARTDI ++I+ V LK G F CPFH+E+TPSF V + Y Sbjct: 1 MAGLIRKEDIDEVRARTDIREIIEGYVSLKSAGIGTFKGLCPFHDERTPSFNVRPQVGSY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ F+M + FVETVE LAA + +E G + E R+ L Sbjct: 61 HCFGCGESGDVYSFVMAMEHTSFVETVERLAARIGYTLHYEGGKPGDRYEAGMRRRLLDA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F++++L A A+++L RG +F +G+AP GWD++LK Sbjct: 121 HKIAAEFFERNLYSADAQEAQRFLGARGFDPAATRKFGVGYAPRGWDHLLKHLRSQGFTD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + L GM ++G YDRFR R+++PIR G IGFG R L + PKYLN+PET Sbjct: 181 EELKATGMFSEGNRG-LYDRFRGRIIWPIRTIAGETIGFGARRLFDDDQGPKYLNTPETQ 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + LYG+ A++D + ++++VEGY DV+A GI AVA+ GT+ HI+++ Sbjct: 240 LYKKSQVLYGIDLAKRDMTKTKQVVIVEGYTDVMAAHLAGITTAVATCGTAFGPGHIKMV 299 Query: 298 FRA------TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R +I +DGD AG+ AA A E ++ Q +G DP L Sbjct: 300 RRMITDDGSGGEIIFTFDGDAAGQKAAMAAFEEDQRFVA---QTFVAVAENGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +G A + + PL F +S + + DL+T +GR P+I+ + LR Sbjct: 357 HKGDAAVRSLIASRRPLFEFAIDSTLAKYDLATLEGRVLAMRAIAPIIAGIKDRDLRPAY 416 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI 453 +++ +LG+ D + +SR R Sbjct: 417 MRKVSGQLGLELDEIQRAVAYAQNHPKLSRTQQAEAVAAPRY 458 >UniRef50_D1N3F9 DNA primase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3F9_9BACT Length = 618 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 160/572 (27%), Positives = 266/572 (46%), Gaps = 34/572 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M + + I D+ AR DIV+LI V+LK+ G N + CPFH EKTPSF V+ +Q + Sbjct: 1 MNFGVSKDIIEDIRARCDIVELIGTFVQLKRSGTNTYKGLCPFHQEKTPSFHVDASRQTF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG---SGPSQIERHQRQTL 116 HCFGCG G+ F M+ + + FV+ + LA+ + +P +G G + ++R+ L Sbjct: 61 HCFGCGKGGDVFRFYMDKENVGFVDALHMLASRVGVVIPENSGGGDPGEGRRRANERERL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 YQ+ + TF+ Q L + + A +YL +RG+ EV RF IG P W L Sbjct: 121 YQINEAFATFFHQVLVRNPNSPAAEYLRRRGIPPEVAERFKIGACPDEWTACLDYGRSLG 180 Query: 177 ENRQSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLN 232 + L+ +G++ + GR +D F+ R+ F I +++GRV+GF R L KY+N Sbjct: 181 FTDEELVTSGIIRKKAETGRCFDHFKGRLTFAIENEQGRVVGFSCRSLEAKPLAGGKYIN 240 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 +PET IF KG LY L A++ ++ N ++ EG +D +A + GI AVA GTS T + Sbjct: 241 TPETPIFKKGNLLYALPLARKMMSDRNMAVICEGQLDSIAFHRAGIECAVAPQGTSFTEN 300 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 ++L R N + D D AG+ A R +E LP ++ + +P G+DPD L Sbjct: 301 QARILSRYCNRIYLALDSDSAGQKAILRDVEILLPM---SFDIKVVRIPGGKDPDELFAH 357 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G A + ++ ++ L +SL + D+ + GR + ++++ + Sbjct: 358 GGAAALQQALDDSVSWLKVLCDSLPQRHDMGSAAGRGHAAVEVAGYLNRITNQVELELYV 417 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLE 472 ++ LG+ +D+ L + ++ + + P +PP Sbjct: 418 RDAAMLLGVSEDALYAELRQVSRKARRNEEFSRGGPAAEP------AYTPNTGEFIPPRP 471 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTG--QLLEHYRGTNNAAT-LEKLSMWDDIADKN 529 + LPG+ + + LLE + AA + +L +++ D N Sbjct: 472 RSENRPLPGI----------QQEDPCSPALLTLLELAVNSETAARQIAELVPPEELPDSN 521 Query: 530 IA----EQTFTDSLNHMFDSLLELRQEELIAR 557 T +LN F+ + E LI Sbjct: 522 PIARAVNLTVNLALNGEFEQVPAELSELLIEH 553 >UniRef50_C1XJV8 DNA primase n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XJV8_MEIRU Length = 592 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 190/604 (31%), Positives = 294/604 (48%), Gaps = 43/604 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M +I + I + +R I +L+ V LK GK + CPFH EKTPSF V+ +K Sbjct: 1 MDAQIAQA-IELIRSRMPIRELVGRYVALKPSGKGVWKGLCPFHQEKTPSFQVSEDKGLC 59 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC G+ FL + + F E +E LA +E+P G + E Q+ Sbjct: 60 YCFGCKNGGDIFAFLQKIEGIGFREALERLAQETGVELPQFKGRSSGRKEA------LQI 113 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ +++ +L + SA +YL++RGL+ I RF +G+AP WD +++ G+ + Sbjct: 114 LELTQAYFRANL----SGSAERYLQERGLNPASIERFGLGYAPKSWDGLIRHLQGHGVDP 169 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDI 238 Q ++AG+LV + GR +DRFR RV FP+ D GR++ F R L +D PKYLNSPET + Sbjct: 170 QEAVEAGVLVERE-GRYFDRFRHRVTFPVLDPMGRIVAFTARALEKDDNPKYLNSPETAL 228 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + LYG +A+ E R +VVEG DV+AL Q G AVA LG+S + + LL Sbjct: 229 FKKSQLLYGYPQARSTIRERGRAVVVEGLFDVIALHQMGFTEAVAVLGSSLSGEQAHLLR 288 Query: 299 RA-TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDP-DTLVRKEGKE 356 RA + +D D AGR A ++L + + + L DG+DP D L+ +GKE Sbjct: 289 RADAAELYLAFDADEAGRKATLQSLNLEI---ARSFVVYAVLLEDGKDPGDLLLLPDGKE 345 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALP-LISQVPGETLRIYLRQEL 415 FE +E A+P + F + +DL P+ + ++ P LIS P + + L+ ++ Sbjct: 346 RFEVALEAALPEVEYRFEAAAAGLDLKRPEHKQKVLEALKPRLISSEPFDPVVEKLKAKV 405 Query: 416 GNKLGI----LDDSQLERLMPKAAES---------GVSRPVPQLKRTTMRI-LIGLLVQN 461 + L + L+D PK A S G++RP KR + +I LL Sbjct: 406 ISALELSPRALEDYLARARTPKRAASAAPDRTLGIGLARPDLTEKRLLRELDVIALLYSV 465 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 PE L L D P L E + S+ G ++L ++ A L + M Sbjct: 466 PEEEFLQWALYVEDHTWPPEGSLLAEFMQAARSEQG--KSRILRYFEQRGEGARLMDVLM 523 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR-------ERTHGLSNEERLELWTL 574 D+ E +L + + ELR ++L A+ ++T L+ E + L + Sbjct: 524 KSPSFDQQNLEAHLNVALARVREVYYELRLDKLKAQLNSTADLDKTRTLTKEIQEVLQAI 583 Query: 575 NQEL 578 E Sbjct: 584 EAER 587 >UniRef50_UPI00016C0A50 DNA primase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A50 Length = 579 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 157/580 (27%), Positives = 262/580 (45%), Gaps = 19/580 (3%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 FI + DIV LI L K+G ++ CPFHNEKTPSF V+ +KQ Y+CFGCG Sbjct: 5 EDFIEKIRTYIDIVSLISEYTNLVKKGASSYIGKCPFHNEKTPSFVVSEDKQMYYCFGCG 64 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQLMDGLN 124 GN I F+M + L F E +E LA N+ + ++ + E ++ ++ L Sbjct: 65 VGGNVITFMMEKENLSFGEAIESLAIRANIPLEYDNSRINNNREAFFKKDVIFDLYKKAA 124 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY +L + RQYL RG++ + I F +GF+P ++ + K + L++ Sbjct: 125 RFYYYNLTRNTPEYVRQYLVDRGINKDSIKIFGLGFSPNSFNALYKYLRSEGVTNELLVE 184 Query: 185 AGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +G+ V N + G YDRF R+MFPI +VI FGGRV GN+ PKYLNS E IFHK Sbjct: 185 SGLCVLNHNSGLIYDRFVNRLMFPIFSPTKKVIAFGGRVFGNENPKYLNSSENLIFHKSN 244 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ ++VEGYMDV+A+ + G VASLGT+ T +LL R T+N Sbjct: 245 NLYGLNLAK--MKNHEYYILVEGYMDVIAMHREGFTNTVASLGTAFTESQAKLLKRYTDN 302 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ YD D AG+ A +A + +G ++ + L +DPD ++K G E + + Sbjct: 303 IVIIYDSDNAGQKATLKASKIL---RDEGFSVKILELNGAKDPDEFLKKYGNEKLQNAIT 359 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A + + DL+ + + +I+ + + E+ + + Sbjct: 360 VANSDIWYKITKIQMLYDLNNLPEKIKFLEQISSIIANLQNSIEQQLYIDEISTRFNVNK 419 Query: 424 DSQLERLMPKAAESGVSRPV--PQLKRTTMRI-LIGLLVQNPELATLVPPLENLDENKLP 480 + + + + ++ V K++ + + L+ +L P + + + Sbjct: 420 SAIEIEIKKRIVNTKENKIVYENHSKKSDIEVDLLSVLYHTPTIYDSISEYVFPE----- 474 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 LF E V ++ + + ++ + I K+ + Sbjct: 475 ---LFTEGVKRNIAISLINDRSIDTALLNKKYPNVEDQKIISSIIIGKDGIYKEKFVLYK 531 Query: 541 HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + D++ L I + + + E+ L L + K Sbjct: 532 IVTDAIKILNNAYYIEQLKNLSANPEKIQHLMKLRNSIVK 571 >UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM01_AKKM8 Length = 599 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 171/598 (28%), Positives = 276/598 (46%), Gaps = 25/598 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 GRI I +L TDIVD++ + + LK+ G + ACCPFHNEKTPSF V+ +Q + CF Sbjct: 2 GRIDEDSIRRVLEATDIVDVVGSYLPLKRAGSRWKACCPFHNEKTPSFIVDQSRQNFKCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+AI F+M + L F +TV LA + + E + R R L Sbjct: 62 GCGEGGSAITFVMKMENLGFADTVRRLAEKAGISIVEEVYDAAEERRRKARTALLVAHKK 121 Query: 123 LNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 F+ + L P A AR YL RG ++ R+ +G+AP L Q Sbjct: 122 AAGFFHRLLLCSPKAAEARAYLNSRGYGADMAKRWQVGWAPDSSREFLAWARREGIPDQV 181 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 LID+G+ ++G Y RFR+R+MFPI + G + F GR+L + KY+NSPET IF Sbjct: 182 LIDSGLANRGERGDLYARFRDRLMFPINNVYGECVAFSGRILRPQENVGKYVNSPETAIF 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG ++ L +A+ + + L+ EG +DV+A + GI++AVA LGT+ T +H ++L R Sbjct: 242 KKGDVVFALDKARGPMGKSGKALLCEGQIDVIACHEAGISFAVAPLGTAFTPEHARILSR 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + ++ C+D D+AG AA RA P+ G+ + + LP G+DPD+ +++EGKEAF Sbjct: 302 YASRIVLCFDADKAGMAAADRAFRELAPF---GKDIYLVNLPAGDDPDSFMKREGKEAFS 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E+A L A + L++ + R ++ ++ Sbjct: 359 GMVERARSFFEVRIERARESGLLDDAASSAAFAREMTALLACMSDSVARDLATADVATRM 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMR--------------ILIGLLVQNPELA 465 + D+ + G + ++T +L L +QN Sbjct: 419 RMAADNLRGAVRMAGRRKGQEQAQSAERKTAEEVPQHPPVKMDRAVAVLCELALQNSRAQ 478 Query: 466 TLVPP-LENLDE--NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW 522 L+ +E L E L G G+ ++++ S Q L L++ Sbjct: 479 GLIVDRIEELLEPMRLLQGGGILKKILARLPSPDSPAAVQAFLVSLPQPERDALGMLNL- 537 Query: 523 DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + +++ ++ + + + LE L+A RLEL L+ +L + Sbjct: 538 -EPIPIPDVDRSVQEACSGIAKAALERHIASLMAELADPSTDAARRLELSKLSVDLKR 594 >UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK Length = 646 Score = 457 bits (1177), Expect = e-127, Method: Composition-based stats. Identities = 183/611 (29%), Positives = 289/611 (47%), Gaps = 39/611 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKL-----KKQGKNFHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I +I RV K +F CCPFH EKTPSF + K + Sbjct: 3 RFPPDFLDEIRTRLPISTVIGQRVTFDPRKSKSSRGDFWCCCPFHGEKTPSFHCDDRKGY 62 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ +FL D L+F E+VE LA + +++P S Q+ LY Sbjct: 63 YHCFGCGVSGDIFNFLCELDGLQFSESVERLADLAGMKLPVL--DLQSYKREMQKADLYD 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M F+Q +L ARQYL++RG++ E+ RF IGFAP + + + Sbjct: 121 VMAIATDFFQNNLYDKGGAQARQYLDERGITPELAKRFRIGFAPAKRTALKEVLSARGVS 180 Query: 179 RQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPET 236 + + D G+L++ + YDRFR R++FPI+D RGRV+ FGGR L D KYLNSPET Sbjct: 181 VKQMEDCGLLISGEDIAVPYDRFRNRIIFPIQDLRGRVVAFGGRTLDQDVQAKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNA-----EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 +FHKG LY A+++N+ + +LVVEGY+DV++L + G VA LGT+ T Sbjct: 241 VLFHKGNILYNAASARKNNSFTSGEKAPSILVVEGYIDVISLIKAGFEKVVAPLGTALTE 300 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 I+LL++ +++ I C+DGD AG AA+R + LP + G +RF+ LP G+DPD +VR Sbjct: 301 AQIELLWKMSSDPILCFDGDDAGLKAAFRVADRVLPLLKAGLSVRFILLPQGQDPDEIVR 360 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G + F++ +++++PL L+ TP+ RA L I ++ E++R Y Sbjct: 361 VGGAKFFDSYVQKSIPLIELLWLRATYGKRFETPEERAALERELKQEIFKIKDESVRRYY 420 Query: 412 RQELGNKLGILDDSQLERLMPKAA-------------------ESGVSRPVPQLKRTTMR 452 Q++ +L S + S + R Sbjct: 421 LQDIKKRLFDFFRSSFSKKKSTEGYSENQKNGIFQGKIFSALENSDMVRTSSHSIPLREA 480 Query: 453 ILIGLLVQNPEL-ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 +++ +L P+L L L+ + + ++ SQ L ++ Sbjct: 481 VILLVLAHYPDLWHENFEVLAELELKNTQLMNFHQSMLEILGSQCLLAEETMIIALEKKG 540 Query: 512 NAATLEKLSMWDDIADKN--IAEQTFTDSLNHMFDSLLELRQEELIARER---THGLSNE 566 LE + A D+ + + ++ QE + + L N Sbjct: 541 QKIILEHMMNLVQKVGMRTFFARAPIEDARSVLKQAIYLHLQEHHLHKRLQDIEEQLLNN 600 Query: 567 ERLELWTLNQE 577 E++ L +E Sbjct: 601 PSSEIFDLLRE 611 >UniRef50_Q1IIK3 DNA primase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIK3_ACIBL Length = 640 Score = 457 bits (1176), Expect = e-127, Method: Composition-based stats. Identities = 171/619 (27%), Positives = 280/619 (45%), Gaps = 50/619 (8%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 P F DL + DIV +I V+L+K G N+ CPFHNEK+PSF+V+ +QF+HCFGC Sbjct: 21 PGDFAYDLKQQADIVRVIGEYVQLRKAGAQNYAGLCPFHNEKSPSFSVHQSRQFFHCFGC 80 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP-FEAGSGPSQIERHQRQTLYQLMDGL 123 GA G+ F+ + + F E V +A + +P E S E R L + Sbjct: 81 GASGDVFTFIQKIENITFPEAVRSIAQKLGVPMPKVEYASPQEAREAKMRGALLDANELA 140 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++Q+ L++P A AR+YL+ RGL E + +F IGFAP + R G N + L Sbjct: 141 CAWFQEQLRKPDAAHAREYLKSRGLDAETVEKFRIGFAPESGFLLRDRMKGE-FNEEILR 199 Query: 184 DAGMLVTNDQ------------GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT---P 228 ++G+ + Y +FR R+MFPIR+++G+VI F GR L D P Sbjct: 200 ESGLFSWKEDATRDSESAKSAPSALYAKFRNRIMFPIRNEQGKVIAFTGRTLATDEKSGP 259 Query: 229 KYLNSPETDIFHKGRQLYGLYEAQQDNAEPN------RLLVVEGYMDVVALAQYGINYAV 282 KYLNSPET I+ K R L+ L A++ ++VEG MD ++L + ++ + Sbjct: 260 KYLNSPETAIYSKSRVLFNLNLAKEAIRGSKDAPGLGYAILVEGQMDCISLYREDVHNVI 319 Query: 283 ASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD 342 A+ GT+ T +LL R T V+ +D D AG AA R+L +++ Q+R + L Sbjct: 320 ATSGTAFTEFQAKLLGRFTKQVVVNFDPDTAGAAAAERSLALL---VSEDFQIRVLTLEP 376 Query: 343 GEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 G DPD +RK+G+EA+ ++ + +L + Q TP+G+ + LP I ++ Sbjct: 377 GFDPDLYIRKKGREAYAYALKHSQKYFDYLIDRARKQYPTGTPEGKLKAVNYLLPHIQRL 436 Query: 403 PGETLRIYLRQELGNKLGILD---DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLV 459 + +R + ++ +KL I +L + + V ++LI L Sbjct: 437 SSKLVRDEIAMDIAHKLQIDSTVLKEELRHVAGSRTATSVKASAAPQITPIEKMLIRALA 496 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT----GQLLEHYRGTNNAAT 515 + +LA + ++ GL T LL+ ++ T Sbjct: 497 SSNQLAKDPVSSREGQDLDFEAARQVHYVLANETLHAGLQTERLIAALLKAVEDGSDPMT 556 Query: 516 L-------EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL---IARERTHGLSN 565 L L+ + + + + + ++ R+ +L I G S Sbjct: 557 LPLGEGDRRTLATILMGDTETLTPEAMEGAFASLRLRRMKARRSDLVVEITAAERKGDSA 616 Query: 566 E------ERLELWTLNQEL 578 E+++L +EL Sbjct: 617 ALGRLSLEKMQLDREIREL 635 >UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG04_LIBAP Length = 648 Score = 457 bits (1175), Expect = e-127, Method: Composition-based stats. Identities = 179/620 (28%), Positives = 291/620 (46%), Gaps = 49/620 (7%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQFYH 60 PR FI DLL I +LI V ++ N + ACCPFH+EKTPSF N K FY+ Sbjct: 4 PRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYY 63 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF C G+ + FL F+E+V+ LAA+ + +P + + + L +L+ Sbjct: 64 CFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVV--DPKIEKKEKIQTDLIRLI 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + F+ SL+ YL++RG+ I F +G+AP ++ + + + Sbjct: 122 EVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEE 181 Query: 181 SLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDI 238 +I+AG+L+ D SYDRFR R++FPIR RG+VI FGGR L KYLNSPET + Sbjct: 182 KIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETIL 241 Query: 239 FHKGRQLYGLYEA----QQDNAE------PNRLLVVEGYMDVVALAQYGINYAVASLGTS 288 FHKG+ LY + A Q+ + + +++VEGYMDV++L Q G+ V+SLGT+ Sbjct: 242 FHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTA 301 Query: 289 TTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDT 348 T ++LL++ + ++ C+DGD G AA++A++ L ++ G ++ F+ L GEDPD+ Sbjct: 302 LTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDS 361 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 +R GK AFE + +++PL L+ +TPD RA L I+ + + LR Sbjct: 362 FIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLR 421 Query: 409 IYLRQELGNKLGILDDSQLERLM-------PKAAESGVSRPVPQLKRTT----------- 450 Y Q + ++L L + A P +L +++ Sbjct: 422 YYYSQAIRDRLQQLFQKYITEHSGYGRYWKKNARHRDQKGPSQRLMQSSLVKGKLSKKPS 481 Query: 451 --MRILIGLLVQNPE-LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY 507 L+ L+ +P L L ++ + L+ L + + Q ++ + Sbjct: 482 LREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQRL 541 Query: 508 RGTNNAATLEKLSM-------WDDIADKNIAE--QTFTDSLNHMFDSLLELRQEELIARE 558 L++L W + NI + Q + +L L RQ+E I ++ Sbjct: 542 CERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKRFRLLSRQKEEIEKQ 601 Query: 559 RTHGLSNEERLELWTLNQEL 578 + E + L L Sbjct: 602 IAQVTAKGEAEKTAILISIL 621 >UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1N8_GLUDA Length = 619 Score = 456 bits (1174), Expect = e-127, Method: Composition-based stats. Identities = 188/535 (35%), Positives = 270/535 (50%), Gaps = 32/535 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA + F+ +L ART I +I R KL + G+N+ ACCPFH EKTPSF V + +H Sbjct: 1 MA--LDPAFLEELRARTPIASVIGRRTKLVRSGRNWKACCPFHGEKTPSFYVYDD--HFH 56 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I F+M + F E V ELA LEVP + +R + L ++ Sbjct: 57 CFGCGAHGDVISFVMQSEGRSFPEAVAELAGEAGLEVPRASPREREAEQRAR--GLSDVL 114 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D + + + L P + YL RGLS E IA F +G++ G +L + + Sbjct: 115 DLVQAAWVRRLHAPEGRAGLAYLRGRGLSDETIAGFGLGWSGDGRGGLLNELAPHGVTPE 174 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG++ ++ GR + F RV FPIRD+RG ++ FGGR+LG+ PKYLN PET +F Sbjct: 175 MLAQAGLMRVDEDGRPKGELFFNRVTFPIRDRRGSLVSFGGRILGDGQPKYLNGPETALF 234 Query: 240 HKGRQLYGLYEAQQDN-------AEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 K R L+G+ A+ A P L+VVEGYMDV+AL Q G AVA LGT+ T++ Sbjct: 235 SKRRTLFGMDRARAALRTARPRGAPPVELVVVEGYMDVIALHQAGFPGAVAPLGTALTSE 294 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 ++ L++ I C+DGD AG+ AA +A ETALP + R LRF LP+GEDPD+L+R Sbjct: 295 QMEALWQMAAAPILCFDGDGAGQRAAVKAAETALPLLDINRTLRFCALPEGEDPDSLLRG 354 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G A A +E A P+ LF+ L V P+ RA + + + + + L R Sbjct: 355 QGSGAVAALLEGARPIGHVLFDLLTQGVRDPGPEQRAAVRRRLVEAAALIADKGLAAEYR 414 Query: 413 QELGNKL--------GILDDSQLERLMPKAAESGVSRPV---------PQLKRTTMRILI 455 L ++ G + ++GVS P + MRIL Sbjct: 415 STLLDRFFETYRRRPGQGKRAGQGGQRGDGRQAGVSWPAGSAPAPFDEAAAAQERMRILT 474 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT 510 +L+++P + V + P L R V + LT + L+ Sbjct: 475 AILLRHPHILPEVED-AYCRLDLPPALARVRAAVMDLAASGDLTDAKALDRRLDE 528 >UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DW96_METI4 Length = 595 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 168/593 (28%), Positives = 289/593 (48%), Gaps = 26/593 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + FI + DIV+++ V LK+ G F + PF EKTPSF V+ +KQ + CF G Sbjct: 7 KEFIEKVRQANDIVEVVSEYVVLKRAGSKFKSLSPFKKEKTPSFFVDPQKQLFKCFSSGY 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G DF+M Y+KL+F+ ++ LA L P Q+Q L++L + + + Sbjct: 67 GGTVFDFIMYYEKLDFIGALKHLARRAGLSFPSSFRYEEQNESLRQKQKLWELHEAVAEY 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + + L +P AR YL++R + + F +G+A WD +L+ + L A Sbjct: 127 WTKILVDEPSGEPARAYLKERNIDLCIAKEFGLGYALNSWDGLLRWASTKKGLLEMLEPA 186 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQ 244 G+++ + + YDRFR R+MF I D+ G+V+GF GR++ + PKYLNSPE+ IF KG+ Sbjct: 187 GLVIRTEHSKIYDRFRGRLMFRITDEAGKVVGFSGRLIEGEQGPKYLNSPESPIFTKGKI 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYG ++A++ AE + ++ EG++D++ L G + AVA+ GT+ T LL R + V Sbjct: 247 LYGFHKAKRAIAETGKAILCEGHIDLIRLHAAGFSTAVATQGTALTEHQAGLLKRFCSEV 306 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 YDGDRAG +AA RA E L +G +++ LP GEDPD+L+ K+G+EAFE +E+ Sbjct: 307 FVAYDGDRAGEEAALRASEILL---AEGLEIKIAQLPPGEDPDSLISKKGREAFEKVLEE 363 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+P +F+ N + G+++++ L+ ++ R E+ +LGI + Sbjct: 364 ALPYPSFVLNKACLEYSPQQAFGKSKIAEKMAGLLIKISDPVRRHTASLEVAARLGISLE 423 Query: 425 ------SQLERLMPKAAESGVSRPVPQLKRTTMRIL-------IGLLVQNPELATLVPPL 471 +QL+ + E ++R Q K++ + + L++ P+ Sbjct: 424 IFEQKMAQLDTANKRPEE--LNRKEDQEKQSWGEKIPPVILESLWFLMEYPQFIAHFKET 481 Query: 472 -ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 + +P L L + +Q ++ LE + + + Sbjct: 482 FPAGVLSAMPAAELLIRLYDFEEAQKTVSISSFLETLSQEQKGIVVSFMFHPLQEKPEGY 541 Query: 531 AEQTFTDSLNH-MFDSLLELRQEELIARERTHGLSNEER----LELWTLNQEL 578 + L +F + E + + ++ LS +E E+ L ++L Sbjct: 542 TPEEHCRILQEGLFLLWRQKCLERIKLQSQSGILSGQEISAKLKEIVDLARKL 594 >UniRef50_D1XXM0 DNA primase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XXM0_9BACT Length = 669 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 135/456 (29%), Positives = 233/456 (51%), Gaps = 12/456 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + ++ ++ T+IVD++ + L+K G N+ CPFH++ TPSF+V+ K Y CF Sbjct: 1 MIDKQTVDKIIDATNIVDVVSDFISLRKAGTNYKGLCPFHDDSTPSFSVSPIKGVYKCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GNA+ F+M Y+++ + E ++ L +N+EV + +++ +R+++ + + Sbjct: 61 CGAAGNAVKFVMQYEQMTYWEALKWLGKKYNIEVKEREMTSEEKLQASERESMLIVNEWA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + ++Q L A QY RG ++I +F +GF D+ K ++ Sbjct: 121 SNYFQNILATNPDGRAIGLQYFRSRGFRDDIIKKFQLGFCLSPRDSFAKAALEAGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ G DRF RVMFP G+V FGGR+L + T KY+NSP+++ Sbjct: 181 LLKTGLCFERQTGELVDRFNGRVMFPWISVSGKVTAFGGRLLDSRTKGVMQKYVNSPDSE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK R+LYG+++A++ A+ + + +VEGY DV+++ Q GI VA+ GT+ + I+LL Sbjct: 241 IYHKERELYGIFQAKKAIAKYDLVYMVEGYTDVISMHQCGIENVVANSGTALSVYQIRLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+N++ YDGD AG+ AA R + L ++G ++ + LPDG+DPD + E Sbjct: 301 HRFTSNIVLLYDGDAAGQHAALRGTDMLL---SEGMNVKVLLLPDGKDPDEFAKMYSAED 357 Query: 358 FEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 +E F N L+ V + P R+ + IS + LR E Sbjct: 358 LVKYIEDNQTDFIVFKINLLLKGV--TDPIKRSEAINSIVESISVIKDPILRDTYLHECM 415 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR 452 + G+ + + + ++ + T Sbjct: 416 ARTGMAEQTLIAQMNRFIYNGREREKREAENQRTRE 451 >UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9MA31_9BACT Length = 578 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 183/590 (31%), Positives = 289/590 (48%), Gaps = 35/590 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + ++ + A D+V++I V+L K+G+N+ CPFH+EKTPSF V+ E+Q +HCFGC Sbjct: 1 MSDPIVDQIKAALDVVEVIGESVRLTKKGRNYTGLCPFHDEKTPSFMVSQERQSWHCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G+ F+M D L F E +E LAA +++P Q R + L+ LM+ Sbjct: 61 GKGGDLFSFVMLKDGLSFPEALEYLAARAGIDLPR-------QGRRQVSKDLFALMEEAV 113 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +FY+Q L+ P +AR YLE+R +S E A F +G+AP W ++ + + SL+ Sbjct: 114 SFYRQELRGPGGAAARAYLERRNVSPEAAAAFELGWAPNAWQSLSDQLKRGGASEASLLK 173 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+++ ++G YDRFR RV+FPIR+ RV+ GGR++ + KYLNSPE +++ K Sbjct: 174 AGLVIQGNRGNCYDRFRGRVIFPIRNVPSRVVALGGRLIDGEGAKYLNSPEGELYSKKNN 233 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LY L A++ E R ++VEGYMD + L G VASLGT+ T + LL R + Sbjct: 234 LYLLDRAKESIREKGRSILVEGYMDALRLHLCGWAEGVASLGTALTEEQAALLRRFADKC 293 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR-KEGKEAFEARME 363 CYD D AG+ A R + ++G + + LP+G+DPD L++ G E+F ++ Sbjct: 294 YICYDSDLAGQTATLRGMYLL---ASEGLTVYVVTLPEGKDPDELLQMPGGPESFTKALD 350 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A+PL + Q + DG + S L +S + L + R EL LG+ D Sbjct: 351 GALPLVSHHIKLFRAQAEQ---DGVTKASRDLLESLSALSSLDLSPH-RAELCQALGLTD 406 Query: 424 ---DSQLERLMPK----------AAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 +LER AA + ++ + + LL L Sbjct: 407 YQLRQELERFRRPVRADVKRSETAAPQSKTSQRDKMFHESEACMTYLLWSQKGLRG---G 463 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK-- 528 E L +L L +++ LS G G+L + A E L+ + + Sbjct: 464 REALQVPRLLETPLLQDIAAALLS--GSDPGELESRWLQLGETAQKEALTEGEYSISRFG 521 Query: 529 NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + AE+ + L+ + E R L + + EE + +L++EL Sbjct: 522 STAEEQWNVLLSALLRRATERRYAALKEKILRGEATEEEVAQWGSLSREL 571 >UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWR8_9FIRM Length = 581 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 173/587 (29%), Positives = 264/587 (44%), Gaps = 32/587 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + ++ RTDIVDLI V LKK+G ++ CPFH EKTPSF+V+ KQ ++CFGCG Sbjct: 5 EEIVEEIRQRTDIVDLIGQYVHLKKKGSSYFGLCPFHGEKTPSFSVSPGKQIFYCFGCGK 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G++I F+M Y+ L FVE +E+LA N+ +P E SG ++ E R L ++ F Sbjct: 65 AGDSIRFMMEYENLSFVEAIEQLAERANVTLP-EKSSGVNKGEEDLRYKLLEINKNAALF 123 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 + + L+ P QYL KR LS E I F +G+A D + + L ++G Sbjct: 124 FVKQLRSPKGKLGLQYLAKRALSGESITHFGLGYAVQEKDALYQHCKALGYEDAILQESG 183 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 + + G D+F RV+FPI D RVIGFGGRV+G+ PKYLNSPET +F K R L+ Sbjct: 184 LFTFKENG-VRDKFFNRVIFPIMDLHHRVIGFGGRVMGDGEPKYLNSPETKLFDKSRNLF 242 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L A++ + L++ EGYMDV+++ Q G AVA+LGT+ T LL R T+ V+ Sbjct: 243 ALNFARRS--RESYLILCEGYMDVISMHQAGCIEAVAALGTAFTEQQAALLKRFTSTVLL 300 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 C+D D AGR A RA+ Q + + L +DPD ++ EGK+A R+ A Sbjct: 301 CFDSDNAGRKACKRAIPIL---REKEIQAKVISLKPYKDPDEFLKAEGKDALMERIHNAK 357 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ-VPGETLRIYLRQELGNKLGIL--- 422 + L +L P L+ + + + + Sbjct: 358 NAFLWEVEELKSGFNLQDPGEMQGYMEAIASLLRDCFSDPVELENYCKAVAREQLLSAEN 417 Query: 423 ---------DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 + SQL + K ++ L + LL+Q E V Sbjct: 418 LLYLVQKGEEKSQLSFALSKQGRREENKREKALTDNLEEQFLSLLLQKEEWIAPVSQYIK 477 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 ++ + L R++ Q G + ++++ + G D+ ++ Q Sbjct: 478 AEDLREE---LCRQV--FLSLQEGKSVQEIMDGFLGEEEKYQKCMALYHGDLYHLDLERQ 532 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 L + E+ I+ EL L +E K Sbjct: 533 EEERMLLDFIRQMKLRGIEKAISEAMDG-------EELSRLFREKDK 572 >UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6VQS6_LACPJ Length = 626 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 153/447 (34%), Positives = 228/447 (51%), Gaps = 9/447 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP + + + +I D I V+LKK GKN CPFH E+TPSF+VN +KQ +H Sbjct: 1 MANRIPEEKVEQVRSAVNIADFIGQYVQLKKAGKNLFGLCPFHEERTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP--FEAGSGPSQIERHQRQTLYQ 118 CF CG GN F+M+ + L F E V ++A ++++P + A S P+ + Q+ L + Sbjct: 61 CFSCGRGGNVFSFIMDLENLSFPEAVVKVADFGHIDLPASYTAQSQPAAPKDQQQADLLK 120 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 L YQ L + A +YL +RGL E I F IG+AP +L F + Sbjct: 121 LYADSAKMYQHILVNTELGEPALKYLHERGLDDETIKTFGIGYAPAN-QLLLDFFKEHQT 179 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPE 235 + Q L +G+ + N G DRF +RV+FPI+D GRVI F GR+L + PKYLNSPE Sbjct: 180 DYQLLRQSGLFIENQAGDLRDRFVDRVLFPIKDASGRVIAFSGRILKKSPNEPKYLNSPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F+K L+ A+ + +++ EG+MDV+A + GI VAS+GTS T + I Sbjct: 240 TKLFNKRSVLFNFDLARGPIRQQKSVVLFEGFMDVIAAYRSGIQNGVASMGTSLTDEQIY 299 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 +L R T+ + CYD D G+ A RAL+ L + +PDG DPD +R +G+ Sbjct: 300 MLERVTDTLYVCYDSDMPGQKATDRALKLL--GGNSRLNLGVIQMPDGMDPDEYLRAQGQ 357 Query: 356 EAFEARMEQAMP-LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F E +AF L ++L + L ++Q+ + + Sbjct: 358 EKFVQVFEDGKQTPTAFEMQYLKHDLNLQNTPDQLTYLQAVLQQLAQLSSSVEQDLYLNQ 417 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSR 441 L + + D ++L + V R Sbjct: 418 LVAEFDLDKDDLKQQLRSLVGQQAVRR 444 >UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHK3_SYNFM Length = 601 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 177/594 (29%), Positives = 285/594 (47%), Gaps = 37/594 (6%) Query: 13 LLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAID 72 + DIVD++ V+L++ G CPFH EKTPSF V+ E Q Y+CFGCG+ G+ ++ Sbjct: 5 VKQAVDIVDVVGQVVQLRRSGNRHLGLCPFHQEKTPSFHVDAENQLYYCFGCGSGGDVLN 64 Query: 73 FLMNYDKLEFVETVEELAAMHNLEVPFE-----AGSGPSQIERHQRQTLYQLMDGLNTFY 127 F+M + + F E + LA +++ +P A G + R +R+ LY+++ F+ Sbjct: 65 FVMKHRNVAFGEAIRYLAERYHIALPERDHVEGATPGAIESARKEREELYRILRSAADFF 124 Query: 128 QQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L P AR+Y+ +RGL EV+ +GFAP WD++ + + + I AG Sbjct: 125 YDQLHHSPEGRIAREYIARRGLPAEVVETERMGFAPQSWDSLSRHLANLGYDVEPGIGAG 184 Query: 187 MLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG---NDTPKYLNSPETDIFHKG 242 +L + + R YDRFR R++FPIRD+ GR++ FGGR L D PKYLNSPET ++HKG Sbjct: 185 LLARSTGKDRVYDRFRNRLIFPIRDEGGRIVAFGGRSLSADLKDEPKYLNSPETAVYHKG 244 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R LY L A++ + + ++VEGYMD++A G VA+LGT+ T +++L R ++ Sbjct: 245 RLLYQLARAREACRQVRQTVLVEGYMDLLAFHARGFFRVVATLGTALTPHQVRILSRMSD 304 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YDGD AG A R L L +RF PDG DPD +R++G E FE + Sbjct: 305 EVVMAYDGDEAGDKAMLRGLPLFLQENVAVSCVRF---PDGMDPDDFLRRDGLEGFEKLL 361 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 L A+ ++ D + R +++ P+ V L+ + ++L + Sbjct: 362 RSRQELGAYAVKRILDGWD-GSASARLKIAAELRPIFDAVRQPLLKSEYLRLAADRLCVS 420 Query: 423 DDSQLERLM--PKAAESGVSR-------PVPQLKRTTMRILIGLLVQNPEL---ATLVPP 470 ++ ++L + E SR P +T ++ LL++ P+L A Sbjct: 421 EEVLNQQLRHDRRTPERPYSRSYRTPVLPGISETQTLEEKILRLLIRYPDLIEQADSSGA 480 Query: 471 LENLDENKLPGLGLFRELVNTCLS-QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 LE E KL L + LV T + + + + + + + + Sbjct: 481 LEYFQEPKLRALAMV--LVGTPHAPESEFNASIVYDELADPESKEMFTRFMLESAELAEP 538 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERT---HGLSNEERL---ELWTLNQE 577 + D L + L+ R +L + G S+ R E+ LN Sbjct: 539 RVQ--LNDWLIALTRRELKQRSLDLDTALKAAVREGDSDRVRHILVEIQNLNSA 590 >UniRef50_Q1GEP2 DNA primase n=17 Tax=Rhodobacterales RepID=Q1GEP2_SILST Length = 669 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 155/420 (36%), Positives = 243/420 (57%), Gaps = 9/420 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F+++L R + D++ +V ++ GK + + CPFH+EKT SF V+ K FY Sbjct: 3 LPPGFLDELRTRISLSDVVGRKVMWDQRKSQPGKGDMWSPCPFHHEKTASFHVDDRKGFY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+A+ F+ + + F+E VE LA LE+P + ++ +R L ++ Sbjct: 63 YCFGCHAKGDALKFVQETENVSFMEAVEILAGEAGLEMP--KRDPKAAEKQDRRTQLAEV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ +++ L+ A+ AR YL +RGL + R+ IGFAP GW N+ G Sbjct: 121 MEQAVKYFRLQLKTQAASEARAYLARRGLDAAALDRWEIGFAPDGWQNLWDALKGKDIAD 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETD 237 ++ AG+ +++G+ YD FR R+MFPIR+ RGR I FGGR + ND KYLNSPET+ Sbjct: 181 DLILGAGLAKPSNKGKKPYDVFRNRIMFPIRNARGRAIAFGGRAMDPNDNAKYLNSPETE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KGR LY A+ + + L+V EGYMDV+AL++ G AVA LGT+ T + + LL Sbjct: 241 LFDKGRNLYNHGPARAASGRGSTLIVAEGYMDVIALSEAGFQSAVAPLGTAVTDNQLHLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R ++ + DGD AG AA R ++ ALP + G+ LRF +P+G+DPD L+R EG EA Sbjct: 301 WRMSDEPVIALDGDTAGLRAAMRLIDMALPLLEAGKSLRFAIMPEGKDPDDLIRAEGPEA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +A ++QA+P+ L+ +P+ +A L I + ++R++ ++ Sbjct: 361 VQAVLDQAIPMVQLLWRRETEGRVFDSPERKAALDKSLREKIKLIRDPSIRLHYANDIKE 420 >UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C33841 Length = 649 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 166/591 (28%), Positives = 280/591 (47%), Gaps = 45/591 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + ++ R +I ++I V LKK+GKN+ CPFHNEKTPSF+VN +KQ ++CFG Sbjct: 5 RIPSDTLEEIKERANIYEVISEHVVLKKRGKNYVGLCPFHNEKTPSFSVNPDKQLFYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH--QRQTLYQLMD 121 CGA GNAI FLM K F + V ELA + + + ++ + LY+++ Sbjct: 65 CGAGGNAIKFLMELKKEPFHQVVLELAKQYKIPIKELESENTKTLQEKISLQDQLYEILA 124 Query: 122 GLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGG-NPENR 179 +Y+ L +P T A YL KR L E I++F IG++P GW+ + + Sbjct: 125 TSANYYEHLLHEPSGTQALDYLINKRRLKLETISKFNIGYSPEGWETLYSYLVEYKKYST 184 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L GM+ ++G YD FR R+M PI+D +GR++ FGGR L N PKYLNSPET + Sbjct: 185 DLLEQTGMIKRRNKGNGYYDTFRGRIMIPIKDVQGRIVAFGGRSLNNQEPKYLNSPETAL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ L ++ ++ ++ +VVEGY DV++L + GIN VASLGT+ + ++ L Sbjct: 245 FSKSKILFALDQSYKNIRNLDQAIVVEGYFDVISLHEAGINNTVASLGTTFSKAQLRKLL 304 Query: 299 RAT--NNVICCYDGDRAGRDAAWRALETALPYMTDGR-QLRFMFLPDGEDPDTLVR--KE 353 R T ++ +D D AG A R + + G+ QL+ + LP+G+D D ++ + Sbjct: 305 RYTDSKQIVFNFDADNAGIKATQRMITEIESLVYSGQVQLKILNLPNGKDADEFIQFNQN 364 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E + + A ++ ++ DL D ++ + L+S++ R Y + Sbjct: 365 STEQYYELISNAPLWFSWQIQQILLNKDLKRADHFEKIVKEMIDLLSKLSDYNKREYYIR 424 Query: 414 ELGNKLGI---------LDDSQLERLMPKAAESGVSRP----------VPQLKRTTMRIL 454 L L + QL+ P A ++ + QL + L Sbjct: 425 HCSEVLSQGDARLIPIYLKNFQLQLAKPIAKQTNNEKSGKFTKVNILLEDQLLKEAENNL 484 Query: 455 IGLLVQNPELATLVP---PLENLDENKLPGLGLFRELVNTCLSQ---PGLTTGQLLEHYR 508 + + ++ PE + + +NL + ++ E++ + + QL+ + Sbjct: 485 LKVYLRYPEYRSQISKDLESKNLFFSVQEHRVIWAEILEFEDNHQYDEKIDKYQLIYKLQ 544 Query: 509 GTNNAATLEKL----------SMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 T ++L ++ + D + SL + + L+ Sbjct: 545 ETIWDSSLTEICINQILNFSELEQHEDNDIERLDLIIKASLIFLEKASLKK 595 >UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXR5_DICNV Length = 551 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 188/558 (33%), Positives = 285/558 (51%), Gaps = 19/558 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 M RIP+ FI+DL+ RT+IV LI +R+ KK G N+ ACCPFH EKTPSFTV+ KQFY Sbjct: 1 MGKRIPKSFIDDLINRTNIVSLIGSRLSYAKKMGANYVACCPFHQEKTPSFTVSEVKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+A+ FLM+Y+ L FVE VE LA H L +P+E + E+ + + Sbjct: 61 YCFGCQAGGDALRFLMDYEHLSFVEAVESLAHFHGLTIPYEETESYNPEEKSRIELGLLC 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q+ A SAR+YL RG+ ++ F +G+AP G + F + Sbjct: 121 LADAAQFFQRCFYTEEAVSAREYLRARGIKKHLVDDFLLGYAPAGNQLL--AFLRDKYEL 178 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L G++ D GR YD FR+R+MFPIR+ RG++I FG R + N+ PKYLNS E+ F Sbjct: 179 PLLQAVGLIGEKD-GRYYDWFRQRLMFPIRNIRGQIIAFGARTIANEQPKYLNSAESPWF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K +LYG A + + L+V EGY+DV+ +AQ+G++ AVA+LGT+ H+Q L + Sbjct: 238 NKRNELYGFDTAARS--KQTSLIVTEGYVDVIKMAQFGLDNAVATLGTAFGDTHLQQLKK 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + V C+DGD AG+ AA +AL + +G RF+FLP GEDPD+ + + G AF Sbjct: 296 RSKKVYFCFDGDAAGKHAAEKALHIIFTHYEEGYDWRFVFLPAGEDPDSFLTQHGSAAFL 355 Query: 360 ARMEQAMPLSAFLFNSL-MPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ + P S FL L + Q T + A + A + +P R ++++L + Sbjct: 356 QLLDASEPPSLFLQRLLNIDQRATWTAEEYAAVVEKAAQWLGLLPQGHYRQMMQKQLQKQ 415 Query: 419 LG----ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 L I+D S+ A S + P R + +L+Q P + + Sbjct: 416 LNTSVAIIDSSEKSIEYHAAGGSLAAAPTKLEAR-----MAAVLLQQPSWYLKI-DMNQY 469 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 + F L+ G L R + L + + D+ + Sbjct: 470 ASLLAKEVPFFYRLLYLLRC--GADKAVLEAEIRAMHLEVDLMRSRQLFSLLDEKLLTVE 527 Query: 535 FTDSLNHMFDSLLELRQE 552 F + + L+ + Sbjct: 528 FEGMMQELLRQHLKKQAR 545 >UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT0_RHOS5 Length = 654 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 179/554 (32%), Positives = 269/554 (48%), Gaps = 30/554 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVK--LKKQG---KNFHACCPFHNEKTPSFTVNGEKQFY 59 +P F+++L R + ++ +V L+K +F A CPFH EK+ SF V+ K FY Sbjct: 3 LPPGFLDELRNRVPLSQVVGRKVTWDLRKSNQGRGDFWAPCPFHQEKSASFHVDDRKGFY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+AI F+ + + F+E VE LA + +P + +R R L + Sbjct: 63 YCFGCHAKGDAIGFVKETENVGFMEAVEILAREAGMTMPARDPRAAEKADR--RSQLAEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ FY+ L+ A++AR YL +R LS+E RF IGFAP G + + G Sbjct: 121 MEEAVKFYRLQLRTGAASAARDYLVRRRLSNEGQERFGIGFAPDGRQALFQALTGKGIAA 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETD 237 L++AG+ + G YDRFR R++FPIRD RGR I GGR + KYLN PET Sbjct: 181 DLLVEAGLCARPEDGGAPYDRFRNRIIFPIRDARGRAISLGGRAMDPAARAKYLNGPETP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KGR LY + A++ + L+V EGYMDV+AL++ G VA LGT+ T D ++L+ Sbjct: 241 LFDKGRNLYNIGPAREAAGKGQPLVVAEGYMDVIALSEAGFGATVAPLGTAVTEDQLRLM 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + + DGD AG AA R ++ ALP + G+ LRF LP G DPD L+R EG A Sbjct: 301 WRIHSEPVIALDGDAAGLRAALRVVDLALPLLEAGQGLRFAVLPPGLDPDDLIRSEGAAA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +E A P+ + L+ +P+ RA L + ++ T+R + EL Sbjct: 361 MARVIEGAQPMVSLLWRRETEGQIFDSPERRAALDKRLRAAVQRIADPTIRRHYGDELNR 420 Query: 418 -KLGILDDSQLERLMPK--AAESGVSRPVPQLKRT--------------TMRILIGLLVQ 460 ++ + + R + E+G V + + +L+ LV Sbjct: 421 LRMDLFGSATPRRAFHRGGRREAGAGMQVSVARNSLLARAASEAAEEQLQEAVLLAALVT 480 Query: 461 NPELATLVPP-LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 +P L +E +D ++R L+ L PG+ G L LEKL Sbjct: 481 HPGLVARFEAGIEAVDFLGEGHRQVWRALMRHAL--PGMEVGDLRARI-AAEAGEGLEKL 537 Query: 520 SMWDDIADKNIAEQ 533 + A + Sbjct: 538 LSESHLRIAPGARE 551 >UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKU2_THEYD Length = 566 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 164/549 (29%), Positives = 266/549 (48%), Gaps = 36/549 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + + ++ R DIV+LI + LKK G+N+ + CPFH+EKTPSF VN KQ +HCFGCG Sbjct: 4 QKVLEEIKHRLDIVELISEYIDLKKTGQNYKSLCPFHSEKTPSFFVNPSKQIFHCFGCGK 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ + F+M Y+K+ F+E + LA LE S I ++ LY + + + Sbjct: 64 GGDIVTFVMEYEKVSFLEAISILAQKTGLEF----ESVKKSISHISKERLYAIYESATRY 119 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y + L + +A+QYL KRG++ + I F IG+AP +++ + LI++ Sbjct: 120 YMEQLNN--SENAKQYLIKRGINQKTIEIFQIGYAPAEKNSLYNFLKEKNFD-DILINSS 176 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGRQ 244 LV+N SYD FR R++ PI D GRVIGFGGR++ + + PKY+NSP+T IF KG Sbjct: 177 RLVSN----SYDFFRNRIIIPIHDLTGRVIGFGGRLIDSSSELPKYINSPDTPIFKKGEN 232 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL-------L 297 L+GL+ ++Q E ++VVEGYMDV+ QYG VA LGT+ T + ++ L Sbjct: 233 LFGLWHSKQHIREKGYVIVVEGYMDVILCHQYGFKNVVAPLGTALTQEQLEKTKRILNNL 292 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + TN ++ +DGD AG AA R+L LP G + + LP+ EDP + ++K G +A Sbjct: 293 KKFTNKILLIFDGDEAGIHAAQRSL---LPLFYGGFIAKIVLLPEKEDPASFLQKYGDKA 349 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F+ + +A+ + + L +S + R L +EL Sbjct: 350 FKNYISKALSPIDLIIKTYPKN-------KLNEGIHSFLNSLSYLKDLIYRDELLKELSE 402 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRT----TMRILIGLLVQNPELATLVPPLEN 473 K GI + + + L + +K IL+ + + PE + N Sbjct: 403 KTGINEKTLRDELKQIVHNKNFKKEKINIKNYLVSKEEEILLRIALSYPEKINYILQKIN 462 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 +++ ++ + + + +LL + + + D+ + Q Sbjct: 463 IEDFEVTIIRNIFSKIEELQKHGQFSLNKLLNIIDEEEKTFISKLIMTSE--IDEELIMQ 520 Query: 534 TFTDSLNHM 542 D L + Sbjct: 521 NMNDCLKSL 529 >UniRef50_UPI0001C377B6 DNA primase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C377B6 Length = 579 Score = 455 bits (1170), Expect = e-126, Method: Composition-based stats. Identities = 151/548 (27%), Positives = 243/548 (44%), Gaps = 33/548 (6%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 F+ L I ++ + V L ++G+N+ CPFH+EKTPS TV E Q ++CFGCG Sbjct: 4 DDEFLYTLRNANPIETVMGSYVNLIRRGRNYVCSCPFHSEKTPSCTVFTETQSFYCFGCG 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G+ I F M + L+F+E V+ LA +EVP S +R R +Y++ Sbjct: 64 AGGDVITFTMKIENLDFMEAVKLLAQRSGIEVPERNNRDSSYAKRKTR--IYEMNRIAAN 121 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y +L + S +Y R L+ + I ++ +G+AP W+ + + DA Sbjct: 122 LYYTNLFKGSDKSGLKYFADRKLTPQTIKKYGLGYAPDSWNFLTDHLKSKGYTDDEIADA 181 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 L GR++D FR+RVMFPI D RG +IGFGGRVL + PKYLN+ T +F KG L Sbjct: 182 -WLGGQKNGRTFDMFRKRVMFPIVDMRGNIIGFGGRVLDDSKPKYLNTGATPVFDKGSNL 240 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 + + A+ N RL++ EGYMDV+A+ Q G + VA+LGT+ T D +L+ VI Sbjct: 241 FSMNFAKNAN--TKRLILCEGYMDVIAVNQAGFDNVVATLGTAITPDQARLISHYAEEVI 298 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG+ A +A+ G Q + + + +DPD ++K G F ++ + Sbjct: 299 IAYDSDGAGQKATQKAINHFADV---GLQTKIIHMEGAKDPDEYIKKFGVNRFRLLLDGS 355 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD- 424 F+ + +DLS+ GR L +++ + R K I Sbjct: 356 DDAIDFMLDKCEDGLDLSSEMGRVELLKRTSKVLAGIESALEREVYISRTSKKCDIPVQV 415 Query: 425 --SQLERLMPKAAESGVSRPVPQLKRTT--------------------MRILIGLLVQNP 462 S ++ ++ K S +K T ++I L++ P Sbjct: 416 LKSHIDDMLKKNRYSAKKNEWRNIKANTNFVRDDVNPEAVNHRKEARAEEMIIYYLLKRP 475 Query: 463 ELATLVPPLENLDENKLPG-LGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 + V D P ++ L++ T L + + ++ Sbjct: 476 QEWEDVEKAIPPDSFVTPFHKKVYSALLDKMRDADKFTILMLNGEFTQEEMG-RISGIAA 534 Query: 522 WDDIADKN 529 ++ Sbjct: 535 KNNDLPIT 542 >UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWR0_9FIRM Length = 632 Score = 454 bits (1167), Expect = e-126, Method: Composition-based stats. Identities = 172/637 (27%), Positives = 283/637 (44%), Gaps = 63/637 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I + DIV +I+ V L K+G N+ CPFH + PSF+V+ +KQ Y Sbjct: 1 MAG-IPNDIIESVKKEADIVAIINQYVALTKRGNNYTCSCPFHEDNNPSFSVSPDKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN FL + + F E V+++A + N+ + + + Q L L Sbjct: 60 CFSCGRGGNVFGFLQEMEGISFPEAVKKVAELSNIALDSRYFETGQAVSQP-HQRLLDLH 118 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L Q SA YL++R L E ++ F +G AP +++ ++ Sbjct: 119 EKARDFYHFYLTQTVAGESAYAYLKQRELKEETLSDFHLGLAPDNPQLLIQYLSEAGFSQ 178 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT------PKYLNS 233 ++ +G+ QG DRF R++FP+ D++GR + F GR+ D+ KY+NS Sbjct: 179 DEMLQSGIFYEASQGLM-DRFHGRIIFPLEDRQGRTVAFSGRIYQADSGDEQKVAKYVNS 237 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PETDIFHK +Y +A+ N++L+ EGY+DV+AL+Q G AVA++GTS T+ H Sbjct: 238 PETDIFHKSSLIYHFAQARPHIRRLNQVLICEGYLDVIALSQAGFPQAVATMGTSLTSQH 297 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 + L + T +I +DGD AG+ A RA E +L ++ + +P DPD ++ Sbjct: 298 LSQLGKVTQEIIFAFDGDAAGQKATARAFELSLTLPRH--TVKAVAIPGKMDPDEWIKSR 355 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G ++F++ + QA+P FL N L + L+ + RA L L++Q+P R Q Sbjct: 356 GADSFKSLINQAIPRYEFLKNYLQQEYQLADLEQRALYINRLLDLVAQLPSPIERTMRLQ 415 Query: 414 ELGNKLGILDDSQLERLM-------------------------PKAAESGVSRPVPQLKR 448 L + G+ E+L KA SG S K Sbjct: 416 ALAEEFGLDLAMLEEQLAQVSYRQRKDQAKESDSPKQDSADKWAKAHSSGFSDQALPSKP 475 Query: 449 TTMR-------------------ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV 489 + IL L+ P + + L ++ +L Sbjct: 476 VQAKPGVLDGQIKSLKAYHCERYILSNLIFNEPAWQFIEGLEQPLLFVHPSAQAIYYQLE 535 Query: 490 NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 + + G + + + +WD A + +EQ D L + + E+ Sbjct: 536 HFYYEKGGRLPLNGILDVEASPDEQQYLASLIWDH-AQTDYSEQAMQDCLKTIDAAFTEI 594 Query: 550 RQEELIARERTHGLSNEERL------ELWTLNQELAK 580 + +EL + + + ++ E+ L+++L K Sbjct: 595 QLKELQTKLKQAQIRGDKTKMNEYLVEILRLSRQLKK 631 >UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS38_DESMR Length = 576 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 178/584 (30%), Positives = 277/584 (47%), Gaps = 30/584 (5%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + + AR +I +++ V L+ G CPFH E SF V+ +K F+HCFGC A G+ Sbjct: 8 VAAVKARANIAEIVGRYVTLRPVGSRLVGPCPFHQETKGSFNVHPDKGFFHCFGCQASGD 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 IDF + LEF E +E LAA +++ + ++ +R + + + +++ Sbjct: 68 VIDFFCRINGLEFREGLERLAAEVGVDLGRARSDPRAAAKKRERDACLAMHELADRYFRH 127 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L + AR+YLE+RG+S E+I RF++G +P GW + G + S I AG+L Sbjct: 128 LLGRDEGRVAREYLERRGVSAEMIERFSLGVSPEGWQGLQTVLRGRGFDDDSAIIAGLLT 187 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLY 249 GR++DRFR R+MFPIRD GRVI FGGRV+G PKYLNS ET I+ KG+ LYGLY Sbjct: 188 QGKNGRTWDRFRGRLMFPIRDGGGRVIAFGGRVMGEGDPKYLNSAETPIYTKGQHLYGLY 247 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 EA+ A+ R L+ EGY+DV+ L Q+G A LGT+ T + + L V +D Sbjct: 248 EARPVMAKTRRALLSEGYLDVITLHQFGYGEACGVLGTAMTHEQAKRLSGFAPRVDLVFD 307 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 GD GR AA RA + L T G R + LPDGED D+L+ +G++ FEA +E+A Sbjct: 308 GDAPGRKAALRAAQMLL---TLGGACRVVPLPDGEDVDSLLHAQGRDGFEACLERAEDGL 364 Query: 370 AFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLER 429 F + + A + + E LR + + LG+ + ++L R Sbjct: 365 NFCLRMVRESYAPR------EIVAWAGEFLGGLADEGLRALFIPRVASGLGLAE-AELRR 417 Query: 430 LMPKAAESGVSRPVPQLKRTTMR----------ILIGLLVQNPELATLVPPLENLDENKL 479 L+ + A+ P P + ++ +V+ P+ A + + Sbjct: 418 LLSRPAKRPAPGPRPGETAAPRQPAWELAPRDAQILSFVVRRPDYAAHLAGAGAGELLGN 477 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 LF + +S E A K M ++D++ A F + Sbjct: 478 ADARLFFARLAGLVSDEA-------EARLTEPETAFWAKAQMEPPVSDEDAA-AFFEELC 529 Query: 540 NHMFDSLLELRQEELI--ARERTHGLSNEERLELWTLNQELAKK 581 + ++ R+ ++ R +EE L L Q L+ + Sbjct: 530 VFLHEARESDRRRSVMDAIRLAQQRGDSEEALRLLGELQALSGR 573 >UniRef50_C2G0R6 DNA primase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G0R6_9SPHI Length = 683 Score = 453 bits (1166), Expect = e-126, Method: Composition-based stats. Identities = 146/430 (33%), Positives = 233/430 (54%), Gaps = 7/430 (1%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + I+ +L I +++ V LKK+G + CPFHNEKTPSF V+ K Y CFGC Sbjct: 24 IKKETIDKVLDTARIEEVVGDFVDLKKRGTSLIGNCPFHNEKTPSFHVSVAKGIYKCFGC 83 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G+A+ F+M+ +K + E + LA ++++V + S + +R++LY L Sbjct: 84 GAGGDALKFVMDLEKYSYPEAIRYLANKYHIDVEEQERSPAQMAAQDKRESLYVLSQWAG 143 Query: 125 TFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F++ ++ Q Y ++RG ++I +F +G++P W +++ + L Sbjct: 144 KFFKDNMWQTDMGQSIGLAYFKERGYREDIIKKFELGYSPDQWTALVEAAKTAGFQEEYL 203 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFH 240 + G+ + D G YDRFR RVMFPI++ GRVIGFGGR L + PKY+NSPE++I+H Sbjct: 204 KEIGLTIQRDDGSMYDRFRGRVMFPIQNLTGRVIGFGGRTLKTEKSVPKYVNSPESEIYH 263 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K LYGL A++ + + +VEGY DV+++ Q G+ V+S GTS T+ I+L+ R Sbjct: 264 KSDVLYGLNFAKKAIVDADNCYLVEGYADVLSVHQAGVENVVSSSGTSLTSGQIRLISRF 323 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T NV YDGD AG A+ R + L +G ++ + PDG DPD+ V+K G +AF+ Sbjct: 324 TKNVTILYDGDTAGIKASLRGTDMLLE---EGLNVKILLFPDGNDPDSYVQKFGSDAFKK 380 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + F +++ + + P RA + + I+ +P E ++ N L Sbjct: 381 YIADHQEDFIFFKTNILLKDAENDPIKRADVIRDVVESIALIPDEIKVAVFIRQCSNLLD 440 Query: 421 ILDDSQLERL 430 I + L L Sbjct: 441 IEERVLLSEL 450 >UniRef50_A6WDD6 DNA primase n=2 Tax=Actinomycetales RepID=A6WDD6_KINRD Length = 629 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 163/529 (30%), Positives = 246/529 (46%), Gaps = 44/529 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + R + +++ +V L+ G +F CPFH+E+TPSFTV + Sbjct: 1 MAGRIHPDDLQAVKERVRLDEVVGEQVALRSGGVGSFKGLCPFHDERTPSFTVRPVTGRW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE----RHQRQT 115 CFGCG G+AI+F+M D L F + VE LA +++ + G S QRQ Sbjct: 61 RCFGCGESGDAIEFVMRIDGLGFADAVERLAQRAGVQLRYVDDGGRSTQRPASDAGQRQR 120 Query: 116 LYQLMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 L ++ FY Q L P A +AR +L +RG S E ARF +GFAP D +L++ Sbjct: 121 LLEMHRVAEEFYGQQLAAPGPAETARGFLAERGFSREDAARFGVGFAPNTGDALLRQLRA 180 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYL 231 + L+ +G+ +G YDRFR R+++PIRD G + FG R L +D KYL Sbjct: 181 KGFGEEELVTSGLAGQGQRG-LYDRFRGRLVWPIRDVGGHTVAFGARRLFDDDRIEAKYL 239 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPET ++ K + LYGL A+++ + R++VVEGY DV+A G+ AVA+ GT+ Sbjct: 240 NSPETPVYKKSQALYGLDLAKREISRTKRVVVVEGYTDVMACHLSGVGTAVATCGTAFGE 299 Query: 292 DHIQLLFR------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGED 345 DH +++ R + V+ +DGD AG+ AA +A E + Q P G+D Sbjct: 300 DHARIVQRMLGEADGSAEVVFTFDGDAAGQKAALKAYELDQRFSA---QTYVAVAPAGQD 356 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 P L G+ A +E +PL F S + + DL++ GR A P++ + Sbjct: 357 PCELRLSAGEAAVAQLVEGRVPLFEFAIRSTIERFDLNSDAGRLAALDAAAPIVGAIRDR 416 Query: 406 TLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT--------------- 450 L+ L G LD+ ++ + +RP Q R Sbjct: 417 GLQQRYAINLDRWTGFLDE---RFVLDRVRAHSGARPAQQPGRPAAAVAPAPPRLPAADP 473 Query: 451 -------MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC 492 R ++ ++Q P V D PG + V Sbjct: 474 RDPVAQLERQVLSCVLQAPWAVADVFDSLEADAFGAPGHRAVHDAVTAA 522 >UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ESB3_9LACO Length = 616 Score = 453 bits (1165), Expect = e-125, Method: Composition-based stats. Identities = 171/610 (28%), Positives = 282/610 (46%), Gaps = 48/610 (7%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DI D+I V+L + GK F CPFH E+TPSF+VN +KQF++CFGCG GN FLM Sbjct: 1 MDISDVIGHYVQLHQSGKGFVGLCPFHEEQTPSFSVNEQKQFFYCFGCGRGGNVFQFLME 60 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT----LYQLMDGLNTFYQQSL- 131 + F E V E+A + N+++P + + + + T L + + Y L Sbjct: 61 LKHIPFTEAVAEVAQLANVDLPSQYLNNGDRSIHQENNTPNGKLMVMHEEAAKLYHHILM 120 Query: 132 QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 P A +YL+ RG++ E+I F +GFAP + + Q L +G+ V + Sbjct: 121 NTPAGAQALKYLKGRGMTDELINDFNLGFAPEQR-ILKPFLEQKINDYQLLRKSGLFVED 179 Query: 192 DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPETDIFHKGRQLYGL 248 + G +DRF +RVMFP+R++ GRVIGF GRV+G DTPKYLNSPET IF+K R L+ Sbjct: 180 NNGGLHDRFVDRVMFPLRNQNGRVIGFSGRVIGKVPADTPKYLNSPETPIFNKRRTLFNF 239 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 A+++ +++ + EG+MDV++ G VAS+GTS T + + +L RA V CY Sbjct: 240 DIARKEARGTSKIYLFEGFMDVISAYSAGAKNGVASMGTSLTEEQVGILGRAVRQVDICY 299 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-EQAMP 367 DGD AG++A RA+ + G QLR + LP G DPD V++ G + F + +Q Sbjct: 300 DGDSAGQNAIDRAVTLFRDHQPQGMQLRVVQLPAGIDPDEYVQQNGADKFAKYLVDQEET 359 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD---D 424 F +L+ +L L++ + + +L + + Sbjct: 360 PVDFYLRFYRLNKNLNNQTELISYLEQSLKLLATLSSSLEQDMYLTQLAKEFDLDKATLK 419 Query: 425 SQLERLMPK---------------------------AAESGVSRPVPQLKRT--TMRILI 455 SQL+ + + S + +KRT ++L+ Sbjct: 420 SQLQDISRRLGGRKRHSQPASLPQNEGSSSGFSVGPGPASSPALQRNPIKRTELAEQLLL 479 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 + + E+ V + + L+ + + L+++ + + +T Sbjct: 480 RYMFHDQEVWDHVAAINDFHFAHERYQTLYLLAESYFSEHGEYSAAGLMDYLKEDSLRST 539 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHMFDSL-LELRQEELIARERT-HGLSNEE--RLEL 571 L ++ + D + Q D + + + + L + +EL ++ R L+N E Sbjct: 540 LGQIEQLN--VDDVVNMQLIDDCVQLIQEQIPLSQKIKELQSQIREASSLNNSELATQLT 597 Query: 572 WTLNQELAKK 581 L + L K+ Sbjct: 598 MKLIKLLKKQ 607 >UniRef50_A5FIZ9 DNA primase n=15 Tax=Bacteroidetes RepID=A5FIZ9_FLAJ1 Length = 704 Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats. Identities = 159/586 (27%), Positives = 260/586 (44%), Gaps = 56/586 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ + + ++I V LK+ G N+ PF +E++PSF V+ K + F Sbjct: 16 LISQSTIDAVFETARVEEVIGDFVNLKRAGSNYKGLSPFSDERSPSFMVSPAKGIWKDFS 75 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN++ FLM + + E + LA +N+E+ + + R+++Y + + Sbjct: 76 SGKGGNSVAFLMEHSHFTYPEAIRYLAKKYNIEIEETEQTDAEKAMTDVRESMYLVSEFA 135 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++Q L A Y ++RG ++E I +FA+G++P WD + K G + Sbjct: 136 AKYFQDVLVNSEEGKAIGLSYFKERGFTNETIKKFALGYSPETWDALTKEALGKGYKLEF 195 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L G+ + + R +DRF+ RVMFPI GRV+GFGGR+L ND KYLNSPE+DI+ Sbjct: 196 LESTGLTIARED-RPFDRFKGRVMFPIHSMSGRVLGFGGRILTNDKKAAKYLNSPESDIY 254 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK + LYG+++A+Q A+ N +VEGY DV+ Q GI VAS GT+ T D I+L+ R Sbjct: 255 HKSKVLYGIFQAKQSIAKLNNCYLVEGYTDVIQFNQAGIENVVASSGTALTPDQIRLVNR 314 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T N+ +DGD AG A+ R ++ L +G +R PDGEDPD+ RK + Sbjct: 315 LTKNITVLFDGDAAGLRASIRGIDLILE---EGMNVRVCAFPDGEDPDSFARKNSHDDLV 371 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A +E + F + LM + + P +A L + IS++P R QE Sbjct: 372 AYLESNSKDFIQFKASILMGEA-KNDPIKKADLIRDMVTSISKIPDRIQREVYIQECARI 430 Query: 419 LGILDD---SQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP------------- 462 + I + S L +L+ K + + K + +NP Sbjct: 431 MEISEQVLVSTLAQLVQKDLAEANKKQKQEQKPFQ-------VFRNPPPNTGFSGGDPED 483 Query: 463 ------------------ELATLVPPLENLDENKLPGLGLFRELVN-----TCLSQPGLT 499 E A V L + + L L+ + + Sbjct: 484 PRTGPPDGYYPEEPGYPQETAEKVDILYGFERKVIEILLLYGSVEEDFEDVFLKADEEGN 543 Query: 500 TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDS 545 ++ E R L + + + F+ +++ + Sbjct: 544 VKEVSEKRRYKVYEKIYLSLQEDEVELSNALFQNIFSGLIDYYNQN 589 >UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP60_9BACT Length = 611 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 186/607 (30%), Positives = 300/607 (49%), Gaps = 47/607 (7%) Query: 11 NDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNA 70 + R DIVD+I A VKLKK G F CPFHNEKTPSF VN QFYHCFGCGA G+ Sbjct: 10 QQVKDRNDIVDIIGAHVKLKKNGPTFLGLCPFHNEKTPSFNVNQNDQFYHCFGCGASGDV 69 Query: 71 IDFLMNYDKLEFVETVEELAAMHNLEVPFE---AGSGPSQIERHQRQTLYQLMDGLNTFY 127 + F+ Y+ L+F + +E+LA+ N+ +P ++++++ L+ ++D F+ Sbjct: 70 LKFVQEYESLDFRDALEKLASRANVILPEWGKGQSPEERLKQKNEKEALFDVLDKATNFF 129 Query: 128 QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 +Q L P A +Y + RGL+ EVI + +G+AP WD V+K + + + L AG+ Sbjct: 130 KQQLLLPQGAEALKYAQNRGLNQEVINNYRLGYAPNSWDAVMKWAKQHSISDELLATAGL 189 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQL 245 N+QG++YDRFR R+MFPI+D GRVI F RVL D KY+NSPET +FHKG L Sbjct: 190 TKQNEQGKTYDRFRNRLMFPIQDISGRVIAFSARVLEKDSKAAKYINSPETPVFHKGNVL 249 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL+ A + E ++ EG +DV+A + G+ A+A+ GT+ T H ++ R +V Sbjct: 250 YGLHIAHKHLKESEHFVICEGQLDVIACHRAGVKNAIAAQGTAFTDQHASMIARYAKHVK 309 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 C+D D AG+ AA + L LP G + L +GEDPDT++ ++G E + ++ Sbjct: 310 LCFDADNAGKKAAVKCLNILLP---KGVIPEIISLEEGEDPDTVLSEQGAEVLKEKLSGG 366 Query: 366 MPLSAFLFNSLMPQVDLSTPDG-RARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 M F+ + S+P + ++S L +++++P + + + L +KL + Sbjct: 367 MNFVDFI----LSDYGPSSPSQEKVKISEFLLDILAKMPNVLMGDWHLR-LASKLQLDAQ 421 Query: 425 SQLERLMP------------------KAAESGVSRPVPQLKRTTMR-----ILIGLLVQN 461 + E+L + A V+ P +L + + R LI L + Sbjct: 422 AISEQLRYLVYNKRDHKQYMKPQAEFQQAPQNVAPPPLRLNKISKRSVAEIELIALALSQ 481 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT-GQLLEHYRGTNNAATLE--K 518 A LV E + L +N+ + Q L + ++ K Sbjct: 482 EVFANLVFENTMDLEPETSESSLALHFINSHIEMGNWKDCSQDLANSYPNVYELVIKQNK 541 Query: 519 LSMWDDIADK----NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER---LEL 571 +S + + + + Q D LN + + +E + E + + + ++ E Sbjct: 542 ISSYHSRSTEGDDFDELMQLINDCLNQISKASIEQKYEVIKEKLLSEQDPQIKQDLLKEY 601 Query: 572 WTLNQEL 578 LNQ+L Sbjct: 602 MALNQDL 608 >UniRef50_C3JBY0 Putative DNA primase n=2 Tax=Bacteria RepID=C3JBY0_9PORP Length = 679 Score = 452 bits (1162), Expect = e-125, Method: Composition-based stats. Identities = 145/458 (31%), Positives = 234/458 (51%), Gaps = 12/458 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I V ++ IVD++ V L++ G ++ CPFH ++ PSF V+ K CF Sbjct: 1 MIDEVTKQKIIDTAHIVDVVSDFVSLRRAGVDYIGLCPFHADRRPSFHVSPSKNICKCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G + FLM +K+ F E + LA + + + S + R+Q++++Y + Sbjct: 61 CGEGGTPVSFLMKLEKMTFPEALRYLARKYGIPLEEREESPEERERRNQQESMYLVQKFA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ + L + A Y RG++ EVI +F +G+AP + +L N + Sbjct: 121 AEYFGKQLLEGDEGRSIALSYFHSRGVTEEVIEKFQLGYAPSSHNALLTAATQAGYNAKY 180 Query: 182 LIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDI 238 L G+ +GRS DRFRER+MFP+ GR++ FGGR++G + KY+NSPE I Sbjct: 181 LYATGLCFEPSEGRSGGDRFRERIMFPVHSVSGRIVAFGGRIMGKSDKMAKYINSPENII 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K R+LYGLY A++ A+ +++ +VEGYMDV+A+ Q GI VAS GT+ T + I+L+ Sbjct: 241 YSKSRELYGLYFAKKAIAQKDKVYLVEGYMDVIAMHQAGIENVVASSGTALTREQIRLIR 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + N+ YDGD AG AA R ++ L G +R + LP GEDPD+ R + F Sbjct: 301 RFSKNITVLYDGDAAGIKAAIRGIDLLLE---AGMHIRVLVLPAGEDPDSFSRSRTIDEF 357 Query: 359 EARMEQAMPLSAFL-FNSLMPQVDL-STPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 + + F+ F + + Q D+ S+P RA + + I +P R Q + Sbjct: 358 NDYI--SEHEVDFITFKTGLFQDDMASSPGRRAAVINDLVHSIGLIPDTIERSVYAQSVA 415 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRIL 454 L I ++ L ++ + + R + R+ L Sbjct: 416 QTLHIDEELLLRQVKIARSNHLMGRATEEQARSRQAAL 453 >UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_LACF3 Length = 631 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 171/620 (27%), Positives = 276/620 (44%), Gaps = 52/620 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +IPR I+ L + DI D+I ++LKKQGKN CPFH + TPSF+VN EKQ+++CF Sbjct: 3 QIPRETIDQLRNQVDIADVISQDIQLKKQGKNLMGHCPFHEDATPSFSVNEEKQYFYCFS 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G+ +L L F+E VE++A +++P E+ GPS LY+L + Sbjct: 63 CHRSGDVFSYLEQAHDLSFMEAVEQVATTAGVDLPRESN-GPSGESASPNTPLYRLHEEA 121 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGW--DNVLKRFGGNPENRQ 180 + Y L A YL KRG+S E+I +F +GFAP D ++K F + Q Sbjct: 122 SRLYHHVLVNTVAGQPALNYLTKRGMSRELIGQFNLGFAPARGEEDLLVKYFTQKGIDYQ 181 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL----GNDTPKYLNSPET 236 + +G+ + G+ +DRF +RV++PI++ G+ I F GR+L + PKYLNSPET Sbjct: 182 LMRASGLFTEDQTGQLHDRFFDRVIYPIKNANGQPIAFSGRLLTKKATENAPKYLNSPET 241 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+K R L+ L +A++ + L + EG+MDV++ G+ +AS+GTS T + + + Sbjct: 242 PIFNKRRTLFNLDQAKKAARKEGHLTLFEGFMDVISAFGAGVRSGIASMGTSFTDEQVAV 301 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 + R T+ + CYDGD AG++A RAL LR + LP G DPD V+ G+ Sbjct: 302 IARTTDKLTICYDGDAAGQNAINRALTMLAASR---LTLRVVQLPAGMDPDEYVQANGQA 358 Query: 357 AFEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 F+ + A +AF + L ++L+ AL +++V R Q+L Sbjct: 359 KFQEYLAHAEETPTAFRLHFLKQGLNLANQSELLHYVEAALREVAKVTDPVERDLYIQQL 418 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI---------------------- 453 + + ++ AA + P+ R Sbjct: 419 AKDYHLNPATLTGQVQELAATAAPRPAYPESSPRQPRQAGTRRYQSTPPTTTTAPSTQAP 478 Query: 454 ------------LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTT- 500 L+ + NP + + V +EN P L L + G Sbjct: 479 PLLGKVELAQQRLLREMFHNPAVRSHVGAIENFHFVDRP-YQLLDAAAKEQLQRTGADEV 537 Query: 501 --GQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARE 558 QL+ + ++ + + ++T D L + D +Q Sbjct: 538 DVAQLMGELTDAKLRTIVGQIEQ--RVVPQAAVDETVDDCLAVLVDVAPIEQQIREKTAA 595 Query: 559 RTHGLSNEERLELWTLNQEL 578 + ++ + L EL Sbjct: 596 LQEAAALNDQQLITKLTIEL 615 >UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN0_9FIRM Length = 597 Score = 450 bits (1158), Expect = e-125, Method: Composition-based stats. Identities = 165/596 (27%), Positives = 281/596 (47%), Gaps = 38/596 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDAR-VKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 + F+ + T+++D+I A + +KK+G + ACCPFH+EKTPSF+++ E FY+CF Sbjct: 3 KFNNEFLQRVKDSTNLIDVIRAYGIDVKKKGSRYWACCPFHHEKTPSFSISPEDGFYYCF 62 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC G++I F+ D++ F + VE LA M ++E+P + S + E LY++ + Sbjct: 63 GCHESGDSIKFIEKMDQITFPDAVERLAEMGHVELPPDEISEEDKREAALVHKLYEVTEL 122 Query: 123 LNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENRQ 180 ++ L+ + Y +KR L + I F +GFAPP W+ + F + Sbjct: 123 AGNYFHNCLLRTNIGKDGLAYFKKRHLDDKTIETFKLGFAPPEWERLYCDFTKRKHISPD 182 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 L+ AG++ + G+ YD FR R MFPI D +GR++ FGGR++ KYLNSPET I Sbjct: 183 ILLQAGLVG-HKNGKYYDTFRNRCMFPIMDLKGRIVAFGGRIMHSEESAAKYLNSPETVI 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K R L+ +Y+A + + ++VEGYMD ++L +GI VASLGT+ T + +LL Sbjct: 242 FNKRRLLFPIYQALPEIRRKRQAIMVEGYMDAISLHAHGIKNVVASLGTAFTVEQARLLK 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI YD D AG++A RALE A G +LR L +G+DPD V G + + Sbjct: 302 KYADEVIFSYDMDAAGQNATRRALEIAGSV---GLKLRVALLGEGKDPDEFVNLHGGDEY 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++QA+P +LF +L Q D +T +G+ ++ +++ +++ Sbjct: 359 LEVIDQAVPALDYLFQALRTQYDGATLEGQQKILNEMFAVLTVQDNTYQFNSFIRKMART 418 Query: 419 LGILDDSQLERLMP-----------------KAAESGVSRPVPQLKRTTMRILIGLLVQN 461 L + + + + VS + +R +L LV + Sbjct: 419 LHMDEGLIRSEAIRYTKKNNSHVYISPNVYGEERTGTVSSNDGRQRRLEQELLKYCLVSH 478 Query: 462 --PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 PE + DE L + +E+ + LE+L Sbjct: 479 ILPEGFDSLEKYSFADE-------FIGRLYDVLKQAGKGNIT--VEYAEARLERSDLEQL 529 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 + + D + + + + + M L+ + R S+ ++ + L Sbjct: 530 AQ-LMMTDYHGVAEPYEEYIRPMRKIYLQNEYKFHTQRAAELMESDPQKAKEEQLT 584 >UniRef50_C5RBJ6 DNA primase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBJ6_WEIPA Length = 621 Score = 450 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 162/612 (26%), Positives = 263/612 (42%), Gaps = 52/612 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP+ + ++ R +IVD++ V+LKKQG+N CPFH E+TPSF+VN EKQ +H Sbjct: 1 MA-RIPQNLVEEIRERVNIVDVVSPYVQLKKQGRNLFGKCPFHEERTPSFSVNEEKQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQL 119 CF CG GN FLM + L F + V ++A +++ ++ + + L +L Sbjct: 60 CFSCGRGGNVFSFLMEIENLSFPQAVAKVAPQAGVDLDEAYLDNDQNVQVDPEIKALREL 119 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + Y L A YL RGL + I F +G+AP G + + F + Sbjct: 120 YEEATKLYHHLLVNTASGEEALSYLTSRGLDEKTIDAFMLGYAPEG-NILYDYFQTQKVD 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 Q L + + V G +DRF RV+F IRD G I F GR L +D PKY+NSPE+ Sbjct: 179 YQLLRKSELFVEWSDGSLHDRFANRVLFTIRDSAGHPIAFSGRKLTQNDDEPKYINSPES 238 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F+K +L+ L A+ + +++ EG+MDV+A Q G+ VAS+GTS T++ IQ Sbjct: 239 LLFNKSAELFNLDLAKDTIKKKKHVILFEGFMDVIAAFQAGVQNGVASMGTSLTSEQIQR 298 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R T+ + YD D AG+ A RAL+ + + +PD +DPD +R Sbjct: 299 LSRMTDKISISYDADMAGQKATKRALDLITQQGR--LSAQIIHIPDNQDPDEYLRSNDAT 356 Query: 357 AFEA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF + F L +L + AL +I+ V +R ++L Sbjct: 357 AFNQVLVHNVEDPVTFNLRYLQIDRNLHNQTELFSYISDALVVIATVKEPVIREQFLRQL 416 Query: 416 GNKLGILDDSQLERLMPKAAESGVSR--------------------PVPQLKR------- 448 N+ + ++ +++ P + R P Q+ + Sbjct: 417 ANEFDLSYEALQDQIRPILLQKQAQRSSGATNTESGNRQKARHQSFPDNQIIKKSVTRIE 476 Query: 449 TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV---NTCLSQPGLTTGQLLE 505 +IL+ ++++ ++ V N +P L+ + QP ++ Sbjct: 477 KAEQILLAWMLRDNDVWLQVTNRANFSFQDVPYETLYMIAMAYREEYQQQPATDMAAFMD 536 Query: 506 HYRGTNNAATLEKLSMWDDIADKN-----------IAEQTFTDSLNHMFDSLLELRQEEL 554 + + L L D + E + + + + E +L Sbjct: 537 YVQKPELTRILASLEEIDSELFMDREQVSEYIRVISDEAPLEEKIRQLSRDIKEA--NQL 594 Query: 555 IARERTHGLSNE 566 R LS E Sbjct: 595 HDHARIAQLSVE 606 >UniRef50_B8G2V7 DNA primase n=3 Tax=Chloroflexus RepID=B8G2V7_CHLAD Length = 655 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 171/638 (26%), Positives = 272/638 (42%), Gaps = 77/638 (12%) Query: 8 VFINDLLARTDIVDLI-DARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCG 65 I+D+ A DIVDLI V L++ G++F CPFH N +TP+F V + Q ++CFGC Sbjct: 2 SVIDDIKANIDIVDLINSMGVGLRRSGRSFVGFCPFHPNTRTPAFYVYPDTQSFYCFGCH 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G DF+M ++F E +E LA + E + + E +R L ++ Sbjct: 62 AAGTVFDFVMRKQGIDFKEALELLAERAGI--RLEPKNDAQRQEDARRARLLEINGIAAR 119 Query: 126 FYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG-GNPENRQSLI 183 ++ L R Y+ +RG++ + I F IG++ W ++ + + +I Sbjct: 120 YFNYVLLNLSRGEPGRAYVARRGINQDAIDAFQIGYSLDEWGHLFSYLHDKKGYSVEDII 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+ + ++G YDRFR R++FPIR+ RG VIGFGGR LG++ PKYLN+PET +F K Sbjct: 180 AAGLAIPGERG-PYDRFRNRIIFPIRNVRGEVIGFGGRALGDEQPKYLNTPETPLFKKSE 238 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ NR +VVEGY+DV+ QYG VA LGT+ + HI L R T+N Sbjct: 239 VLYGLDLARDAIRATNRAIVVEGYVDVITAHQYGFRNVVAPLGTALSKAHINQLKRLTDN 298 Query: 304 VICCYDGDRAGRDAAWRALETA------------------LPYMTDGRQLRFMFLPDGED 345 V D D AG+ A R LET + + + +R + LP G D Sbjct: 299 VYLALDADAAGQKATLRGLETIRTTGEEEGEGRMVTTAQGIVRLENDVTIRVIRLPAGRD 358 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD ++ + ++ +EQA P+ F + +D+ P + + +PL+S++ G Sbjct: 359 PDEVIAAD-PNLWQQLVEQAAPVMDFYLEAYTAGLDMHDPIQQRQAIERIIPLLSELDGA 417 Query: 406 TLRIYLRQELGNKLGILDDSQLERLMPKAAESGVS----------------------RPV 443 R + G+ + ++ L + + + P+ Sbjct: 418 AQR-VYVARVEQITGVRSELIVDLLRARVQPARRNDRSRNKRPLLRPEEPPLPPTPSPPL 476 Query: 444 PQLKRTTMRILIGLLVQNPELATLVPP-LENLDENKLPGLGLFRELVNTCLSQP------ 496 + +R T L+ L ++ P + + LE LF V L +P Sbjct: 477 DERRRKTEAYLLALALRYPSVNIAIEKLLEEYHARCREAGELFGAGVEDLLEEPLHQAIW 536 Query: 497 --------------GLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 + +E L + + D + Sbjct: 537 QAYLATPLDQRPTDQESLQAWIETLGEPLTGGAKPLLELLERRPDDVRFRHEAEQCARIL 596 Query: 543 FDSLLELRQEELIARERTHGLSNEERLE-----LWTLN 575 + + R R R L NEE +E L L+ Sbjct: 597 RKAQVMERIRRYNERLRE--LDNEEEMERILHHLRELS 632 >UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4F6_DESRD Length = 573 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 170/574 (29%), Positives = 267/574 (46%), Gaps = 26/574 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R I + AR +IVD++ V L++ G + CPFH E PS +V+ EK F++ Sbjct: 1 MARR-SGDTIEAIKARLNIVDIVRRYVDLRQVGDRWAGVCPFHQETKPSLSVHPEKGFFY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ DF + LEF + +EELA + + +Q ++ +R L ++ Sbjct: 60 CFGCQASGDLFDFYCMINGLEFRQALEELAREAGVTLNDRPDPQAAQRQQERRACL-EMH 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +F+Q+ L+ A AR+YLE RG+ + F +G+AP W + + + Q Sbjct: 119 SLAQSFFQRQLESAEARQAREYLEARGVDETMQDYFGLGYAPEQWQALCGHLQQSGYSPQ 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 + AG+L N +GR YDRFR RV FPI D G+VI FGGRV+G PKYLNS ++ I+ Sbjct: 179 KGVTAGLLSQNKKGRIYDRFRGRVTFPIHDLGGKVIAFGGRVIGEGEPKYLNSSDSPIYK 238 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG LYGLY+A+Q + +L+ EGY DV+AL +YG A LGT+ T + ++ L Sbjct: 239 KGAHLYGLYQARQAVTQSKEVLLTEGYADVIALVRYGFTNACGVLGTALTEEQVRRLAGL 298 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V YDGDRAGR AA R+ E L G Q R + LPDGED D+L++ +G F+ Sbjct: 299 ARRVTLVYDGDRAGRQAASRSAEMLL---RQGVQCRVVSLPDGEDVDSLLQGQGAAGFQR 355 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + +A +F L + A ++ + T + Y + L Sbjct: 356 YVREAEEGLSFCLRVLRESGVAR------EILRWATEFLNGLHDSTWQAYFLPRVAAGLE 409 Query: 421 ILDDSQLERL--MPKAAESGVSRPVPQ-LKRTTM----RILIGLLVQNPELATLVPPL-E 472 + + + +A SG ++ Q L+RT+ R L+ + P + L Sbjct: 410 LSETELRRAVDGNREAKTSGGAQQRGQRLERTSPGQRDRELLHFAISFPAYTKRLDVLGL 469 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + G L+R++ + +LL H ++ + + Sbjct: 470 DHALATERGRQLWRKI-------QAFSREELLLHLDEGEKRFYIQSELDPIPAERERLVW 522 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 + L+ + + + G + E Sbjct: 523 EGIEQFLHRTRQDEKLHEMRTALKKAQEAGDAEE 556 >UniRef50_C6XRH9 DNA primase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRH9_HIRBI Length = 645 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 175/585 (29%), Positives = 277/585 (47%), Gaps = 48/585 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R FI++L R I + +VKL + GKNF PF +E TPSF V+ +K+ Y CF Sbjct: 2 RFSEAFIDELKDRLPISGYVGRKVKLVRSGKNFKGLSPFKDENTPSFYVDDDKRSYRCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G+ I F+ + L F E VE+L + +E+P E + Q+ +R++L++LM+ Sbjct: 62 TQNSGDIISFVQETEGLSFQEAVEKLVQLAGMEMPTETKAEKKQV--TKRKSLFELMEAA 119 Query: 124 NTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY++ L++PV AR+YL + RGL R IG+AP GW + + L Sbjct: 120 VAFYEEQLREPVGEQAREYLSKSRGLGEGAWRRHRIGYAPEGWQTLHDHLIKMGATAKEL 179 Query: 183 IDAGMLV--TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-------NDTPKYLNS 233 ++ G++ N YD FR R++FPI D GR I GGR L PKY+NS Sbjct: 180 LEIGLVRPSKNSSKPPYDAFRHRIIFPILDPTGRPIALGGRALEPGHVLKEKGIPKYVNS 239 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNR-----------LLVVEGYMDVVALAQYGINYAV 282 ET +FHK +Y A+ + +R L+V EGYMDV+A+A++G + AV Sbjct: 240 SETPLFHKSSVIYNYGRARDAIYKLSRNASSADPFARGLIVTEGYMDVIAMAEHGFSTAV 299 Query: 283 ASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD 342 A +GT+ T + +++L+R I C+DGD AG+ AA RA++ ALP + G+ + LP Sbjct: 300 APMGTALTEEQLKMLWRVGPEPIMCFDGDEAGQKAAMRAVDLALPMLEPGKSVYVTILPQ 359 Query: 343 GEDPDTLVRKEGKE-AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 G DPD L++ +G E + A PL L++ + + L TP+ RA +S Sbjct: 360 GMDPDDLLKTDGGEYGLRDLLRNARPLVELLWDRELNKEKLDTPERRAGFEARLDEAVSA 419 Query: 402 VPGETLRIYLRQELGNK--LGILDDSQLERLMPKAAESGVSR------------PVPQLK 447 + E +R +EL ++ D Q ++ + E G PV +L Sbjct: 420 IANEQVRRAYERELKDRRYQYFRDQRQAKQTPFRKNEWGGKNSSNFRGKNIAQGPVIKLA 479 Query: 448 RT---TMRILIGLLVQ---NPELATLVPPLENL-DENKLPGLGLFRELVNTCLSQPGLTT 500 T T R +G++V+ +P L + + D L L ++ + Sbjct: 480 DTRGLTGRTGLGMIVRAIDSPNLMDEAKEMLAMADFRDEDVLALRNAALDVQDFGEKVDR 539 Query: 501 GQLLEHYRG---TNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 + H R T +A LE+ + I + + + +L Sbjct: 540 SAIAAHLRSLGRTRSAKLLEEYPNQEPIDPSSTIGREWLAALERF 584 >UniRef50_B1ZCZ4 DNA primase n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZCZ4_METPB Length = 549 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 167/492 (33%), Positives = 250/492 (50%), Gaps = 10/492 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RI I + R + +++ V+LK+ G+ + A PF E+TPSF VN +K F+HCF Sbjct: 3 RITHATIEAIKDRLPVSEVVGGYVQLKRAGREWRALSPFARERTPSFFVNDQKGFWHCFS 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HGNAIDF+M L F E VEELA +EV + + ++ R R + +L+ Sbjct: 63 TGKHGNAIDFVMEMSGLTFPEAVEELAGRAGIEVTRDGITRETEASRAARGSAIELLACA 122 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ + LQ + +A+ YL KRGL + ++ IG+AP +L+ + Q I Sbjct: 123 QDFFVRQLQ--ASEAAQAYLRKRGLRRRIASQLGIGWAPEAGRALLEHLADRGWSTQDAI 180 Query: 184 DAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +AG+ + D D +R R+MFPIR++ VI FGGR + PKYLN ET +F K Sbjct: 181 EAGVATSPDDPSVPVRDFYRGRIMFPIRNRVKEVISFGGRAMDGGMPKYLNGRETALFDK 240 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LY + A+Q + +V+EGYMDV +AQ GI VA +GT+ T +H+ L+R Sbjct: 241 GRVLYHMDRARQAISRNGCAIVLEGYMDVAQVAQAGIENVVAPMGTALTVEHLHALWRVA 300 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 V+ DGD AG AA R L+TALP+++ R++ F LP G DPD LVR G A +A Sbjct: 301 PVVVHIADGDEAGARAADRTLDTALPWVSGDRRIVFGILPTGVDPDDLVRSAGPNALQAV 360 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + QA ++ L+ L + P+ RA+L T ++ V ET+R EL + Sbjct: 361 IRQAQHMAERLWLKLRAETPGDGPEDRAKLETGIRATLAVVGEETMRRAFTDELLRRT-- 418 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPE-LATLVPPLENLDENKLP 480 +L + P+ + + R + L+ ++ +PE L + L Sbjct: 419 ---RRLGQARPQLGPTALERRLRPAIPAREAALVVAVLDHPEYLDASIERFCALKFAAPA 475 Query: 481 GLGLFRELVNTC 492 L LV Sbjct: 476 AQTLQERLVRAA 487 >UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN04_9DELT Length = 565 Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats. Identities = 166/571 (29%), Positives = 266/571 (46%), Gaps = 27/571 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + ++ +R + D++ V+LK G CPFH E SF+V ++ FY+CFGC Sbjct: 4 IDPREVAEIKSRLSLEDIVGRYVQLKTVGGRLMGPCPFHQETRASFSVTPDQGFYYCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ I+F N + L+F E V +LAA +++ + GS P + ++ N Sbjct: 64 QASGDIIEFFKNINGLDFNEAVTQLAAEAGVKLARQGGS-PGPASMGRASVCREVNSWSN 122 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +F+ Q LQ AR YLEKR +S E F +G++P GW+N+ + ++ Sbjct: 123 SFFGQHLQGSNGQKARLYLEKRQISQETAKAFGLGWSPDGWNNLKSFLESRGFTPEDGVE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N++GR YDRFR R++FPI G V+ FGGRV+G+D PKYLNS E+ I+ KG Sbjct: 183 AGVLSRNERGRIYDRFRARLIFPIIALSGAVVAFGGRVMGDDEPKYLNSSESPIYTKGEH 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLY+A+ +R+L+ EGY+DV+AL QYG + LGT+ T ++ + V Sbjct: 243 LYGLYQARTHITRSSRVLLTEGYLDVMALHQYGFENSCGILGTALTKAQVKRMAGLAREV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + +DGD G+ AA ++ E L G R + LP+GED +L+ G++ E +++ Sbjct: 303 VLIFDGDAPGQSAALKSAEMILQ---AGLTCRVLILPEGEDAHSLLVARGRQGLEDLLQK 359 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 F LST I+ + R Y + + LG+ + Sbjct: 360 TTDGLDFCLKM------LSTNKSPGETMKWVENFITHFKDLSWRSYYIPRVAHVLGLTEK 413 Query: 425 SQLERLMPKAAES-GVSRPVPQLKRTTM---RILIGLLVQNPELATLVPPL-ENLDENKL 479 E+ P A ++ G +R Q + R L+ V PE T + L Sbjct: 414 ELREKFTPAAQKTPGDTRVWSQQGKGAEQRDRELLTFAVCFPEDRTRLQNKNLGLVLTSQ 473 Query: 480 PGLGLFREL-VNTCLSQPGLTTGQLLEHYRGTNNAATLEK-----LSMWDDIAD---KNI 530 + +L V L + + A LEK L+ ++ D + Sbjct: 474 WARQFWDKLRVMHQDDLSALNEDESAFFVQSKMQRAQLEKEKTRILAQIEEFIDRCMTRM 533 Query: 531 AEQTFTDSLNHMFDSLLE---LRQEELIARE 558 + + +L+ S + R +L+ + Sbjct: 534 STRNLKTALSRAQQSQDQDEVRRILQLLQKS 564 >UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ35_ANATD Length = 617 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 179/594 (30%), Positives = 284/594 (47%), Gaps = 32/594 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + +L++ DIVD++ V LKK G NF A CPFH E+TPSF V+ KQ +HCFGCG Sbjct: 33 ERVVEQVLSKVDIVDVVSMYVPLKKVGVNFRALCPFHQERTPSFYVSPAKQIFHCFGCGV 92 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGLNT 125 GNAI F+M + L F E ++ LA ++V F + S ++ Q++ L L + Sbjct: 93 GGNAIHFVMRIENLTFTEALKVLAGKAKIDVDFSQTQSSKDKVLAKQKEELISLHNDCLE 152 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++Q+ L A +Y+ KRG+ E +F +GF P +N+ + +++ + + Sbjct: 153 YFQRQLYLRENMDAARYVLKRGIRKETAKQFGLGFCPED-NNLYEML-SRKYSKEIIDKS 210 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQ 244 G+ + G++Y RF R++FPI D RVIGFGGR++ + PKY+NSP+T IF K + Sbjct: 211 GIFIER-NGKNYCRFEGRLIFPIFDTMNRVIGFGGRIIEDSQAPKYMNSPDTLIFSKSKV 269 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ + ++VEGYMDV++L Q GI+ V LGT+ T DH LL R N V Sbjct: 270 LYGLNIAKSS--KEKDFVIVEGYMDVISLHQEGIDNVVGVLGTALTQDHSFLLRRYKNEV 327 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + C D D+AGR+A +R+ + +G ++ M L + +DPD ++K GK+AF + + Sbjct: 328 VLCLDSDQAGRNATFRSADIL---YQNGLIVKVMELENAKDPDEYIKKFGKDAFLLKKQN 384 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALP-LISQVPGETLRIYLRQELGNKLGILD 423 AM F L DLS D + R ++ + E R ++L I + Sbjct: 385 AMFAIDFKVKQLSSNYDLSKSDQKFRFVREYFEKILMPITNEVERQEYIRKLSQLTQIDE 444 Query: 424 DSQLERLMPKAA------------ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 ++ L+ + + + + I LL E A + Sbjct: 445 EAILKEFTKNENIKLKRLESIQHFKQVQQKSNLTEEERIKKNDIDLLSIYVEWANKSESI 504 Query: 472 ENL----DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 N D LF + N LT LL + L S + Sbjct: 505 RNAVAEDDFCTEDIKMLFSSIKNLINEGMELTYSMLLTFVNDEKILSELTSFSSKGFETE 564 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + A + + L + +L L++E L A++R E+ LEL L +++ + Sbjct: 565 E--AAKRAIEELKTNNNRMLWLKREMLEAQKRG---DTEKVLELQMLIRKIKDR 613 >UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_CYAP4 Length = 690 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 172/573 (30%), Positives = 274/573 (47%), Gaps = 27/573 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + TDIV+++ V L+K G++F CCPFH +K+PSF+V+ KQFY+CFG Sbjct: 5 RLHPDTIEQVRQATDIVEIVSEYVVLRKAGRDFSGCCPFHEDKSPSFSVSPAKQFYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMD 121 CGA GNAI FLM K F E V ELA + + V + ++R R+ LY+++ Sbjct: 65 CGAGGNAIKFLMEIGKRSFSEVVLELAQKYGVPVKTLQDTEKQDLQRKLSLREQLYEVLA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FYQ +L+QP A QY++ R LS I F IG+AP GW + + Sbjct: 125 LTCNFYQHALRQPQGYHALQYVQAARQLSEATIQEFQIGYAPAGWQVLYGYLVEQKQYPV 184 Query: 181 SLID-AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L++ AG++V G YDRFR+R++ PI D + RV+GFG R L N+ PKYLNSPET++F Sbjct: 185 ELVEQAGLIVPRKGGGYYDRFRDRLIIPIHDLQSRVVGFGSRTLTNEEPKYLNSPETEVF 244 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +KG+ L+GL +A+ A+ ++ +VVEGY DV+AL GI VA++GT+ + + ++ L R Sbjct: 245 NKGKILFGLDKARGAIAKADQAVVVEGYFDVIALHAAGIKNVVAAMGTALSQEQMRQLLR 304 Query: 300 AT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLVRKEGKE 356 +I +D D+AG AA RA+ G QLR + +P+G+D D +++ Sbjct: 305 YCESKQIILNFDADKAGAKAAERAIGEIEDLAYRGEVQLRVLNIPNGKDADEYLKEYSPN 364 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 ++ ++QA + + DL D ++ + L+ +P +LR + Sbjct: 365 DYQTLIDQAPLWLNWQIERALVGQDLRQADQFQQVIQKMVQLLGNLPNASLRTHYIHYCA 424 Query: 417 NKLGILDDS---QLERLMPKAAESGV--------SRPVP-QLKRTTMRILIGLLVQNPEL 464 L D QLE + RP L+ L+ + + P Sbjct: 425 GLLSQGDARLALQLEEALRSQVRGQRWHGRSQKWQRPADFTLREAAEAQLLRIYLHCPPY 484 Query: 465 ATLVPPLENLDENKLPG---LGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 + + E + L+R+++ Q + L+ Sbjct: 485 RQDIHNALSQRELEFSLSHHRFLWRQILVVEEQHTPPPDEQ-----GQPPHPELAPGLAE 539 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL 554 D I F+ + +F + + +L Sbjct: 540 LDLITALQDLCTDFSQEMQQVFHLIQLDEKTQL 572 >UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_LACS1 Length = 617 Score = 447 bits (1150), Expect = e-124, Method: Composition-based stats. Identities = 170/606 (28%), Positives = 275/606 (45%), Gaps = 32/606 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP I++L + +I+D+I V+L K GKN+ CPFH+EKTPSF+VN +KQ +H Sbjct: 1 MARLIPEATIDELRSNVNILDVISQYVQLHKSGKNWFGICPFHSEKTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF C GN F+M + L F E+V+ +A + N ++ + +Q E + + +L Sbjct: 61 CFSCHRGGNVFKFIMELEGLSFPESVQRVAELANYDLGISIDNSENQNETSENGKIRKLY 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP--E 177 Y L + A +YL KRG++ ++I F IGFAP +N+L+ F Sbjct: 121 KETTKLYHHILVNTVLGEPALEYLHKRGINDDLIEEFEIGFAPE--NNILEAFFKEQKLY 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPE 235 + Q L +G+ + +RF RVMFPIRD G+ I + GR+L +D PKYLNSPE Sbjct: 179 DYQILRKSGLFIERQSTELVERFNGRVMFPIRDTSGQTIAYSGRLLEKRDDAPKYLNSPE 238 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + L+ +A+ ++ EG+MDV+A + GI +AS+GTS T + I Sbjct: 239 TAIFNKRKVLFNFDKAKGIIRREKEAILFEGFMDVIAAYRSGIKNGIASMGTSLTDEQIY 298 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L R T++++ CYDGD AG++A RALE P L + +P+ DPD +K G Sbjct: 299 ALDRVTSHLVICYDGDNAGQNATKRALEIIEPTGK--FSLEVIKIPEKLDPDEFTKKYGS 356 Query: 356 EAFEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F F + +L+ + + L I++V + Sbjct: 357 EKFVELARNDRKSPLEFYLSYYEQDKNLNNENNQLEYIRDILQEIAKVRDPLEQDLYLNR 416 Query: 415 LGNKLGILD---DSQLERLMPKAAESGVSRPVPQLKRTTM--RILIGLL-VQNPELATLV 468 L + + DSQL+++ K + Q + R +I VQ+ A Sbjct: 417 LAQRFNVAKENLDSQLKQIREKIFAQRAEKQEEQSYQAQQIPRTVIQKNEVQHFSKAEKA 476 Query: 469 PPLE----------NLDENKLPGLGLFRE----LVNTCLSQPGLTTGQLLEHYRGTNNAA 514 L L N +P E + N + + + + N Sbjct: 477 ERLLLYRMLHDKNVWLRINGIPDFNFIHENYQVIYNLSEAYFDIHDEYEVADFLDFINED 536 Query: 515 TLEKLSMWDDIAD--KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELW 572 L ++ + ++ D ++EQ D L+ + + + + E + ++ Sbjct: 537 GLRQVVVTLEMGDYADEVSEQEINDCLSLIMSQTPLEDKIKKVQTEMLEAKRQNDTAKIT 596 Query: 573 TLNQEL 578 L +L Sbjct: 597 KLTMDL 602 >UniRef50_Q83GI9 DNA primase n=2 Tax=Tropheryma whipplei RepID=Q83GI9_TROWT Length = 603 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 166/610 (27%), Positives = 276/610 (45%), Gaps = 48/610 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKK-QGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 +I + I+++ R +I ++I LK+ + CPFH+E+TPSF V E YHCF Sbjct: 3 KIKQEVIHEIKERANIREIIGEYTNLKRQSAGAYAGLCPFHSERTPSFHVR-ETGLYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+ + L FV+ VE+LA + + + G R L Sbjct: 62 GCGKGGDVISFVQEIEGLNFVDAVEQLARTLGITIVYYEGDSTP----DSRSNLLAACKS 117 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY + L +T A +L+ RG ++ R+ IGF+P ++ K Q Sbjct: 118 AAEFYSEQLLS--STPAVTFLKSRGFDRDLCERYQIGFSPTNSGDLYKHLRDKGFTLQQA 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFH 240 + AG+L DRFR R+++P++D G ++GFG R L D PKY+NSPE+ ++ Sbjct: 176 VAAGLL----NPSGMDRFRARIVWPVKDVTGNIVGFGARKLAEDAQGPKYINSPESSLYK 231 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K LYG A++ ++ +R+++VEGY DV++ Q GI+ AVA+ GTS H++L+ R Sbjct: 232 KNSLLYGFDVAKKAISKKDRVVIVEGYTDVMSCHQSGIDEAVATCGTSWGIGHMRLIKRM 291 Query: 301 TNN---VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 ++ +I +DGD+AG+ A RA + + F P G DP L K G +A Sbjct: 292 LSDSGVLIFAFDGDQAGQHAIMRAFKDSPEIAARSYAAIF---PKGLDPCELRIKNGAQA 348 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +E+A+PL F+ N + + L T R LP + ++ LR + + + Sbjct: 349 VIDLVERAIPLYEFVINHQLSKCPLGTFPERRAALAKILPFLKEISDRILRDHYTGLVCS 408 Query: 418 KLGILDDSQLERLMP--------------------KAAESGVSRPVPQLKRTTMRILIGL 457 +LGI D Q++ L+P K E P + + +I Sbjct: 409 RLGI-DREQVDLLLPKLEHISSRFHPSKIPWQEDWKKKEFAAPTNPPDARFALEQQVIKS 467 Query: 458 LVQNPELATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLT-----TGQLLEHYRGTN 511 L+Q L + D P L +++ + + + +L+ + Sbjct: 468 LLQYQHLLERDTAIAMCDYSFHNPTLSFIAQMIGMVIREQNRSISPAEFSKLIHSTVPSE 527 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL 571 ATL+ L + + + + + L L ++ L+ R+ + S E+ LEL Sbjct: 528 YHATLQALEVLPVPVSPDKLDSYLEGLVRSFENQHL-LEEKALLLRQLSSEKSLEKSLEL 586 Query: 572 WTLNQELAKK 581 EL K+ Sbjct: 587 RQRIVELEKQ 596 >UniRef50_C1F7T6 DNA primase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T6_ACIC5 Length = 590 Score = 447 bits (1149), Expect = e-124, Method: Composition-based stats. Identities = 166/592 (28%), Positives = 271/592 (45%), Gaps = 27/592 (4%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F ++ + DIV +I V+LKK G NF CPFH+EKTPSF+V+ +QF+HCFGCG Sbjct: 3 DFAQNVKQQADIVRIIGEYVRLKKAGAQNFSGLCPFHSEKTPSFSVHAGRQFFHCFGCGQ 62 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVP-FEAGSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+ + + F E V +A + +P E S E QR L L + Sbjct: 63 SGDVFTFVQKIENVSFPEAVRTVAQKCGIALPKREFHSPEEAAEHRQRAKLIDLHEAAAQ 122 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++++ L+ +AR YL +RGL + IARF IG+AP + + +R G + +L + Sbjct: 123 WFEEQLRSGEGAAARAYLAQRGLDEKGIARFRIGYAPDSFHALRERLQGMA-DLDTLRQS 181 Query: 186 GMLVTNDQ-----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT---PKYLNSPETD 237 G+ +Q G Y RFR+R+ FPI ++ GR+I F R L + PKY+NSPET Sbjct: 182 GLFSWKEQEDGQPGPIYSRFRKRITFPIANEGGRIIAFTARALESGEKAGPKYMNSPETP 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ KG L+ L +A+Q E + ++VEG MD ++ GI +A+ GT+ T +LL Sbjct: 242 LYSKGHVLFNLDKARQAIREADFAVLVEGQMDCISAYLAGITNVLATSGTAFTEMQARLL 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R + VI +D D AG +AA +++ +G +++ + L G DPD +R+ G A Sbjct: 302 ARYSKRVIVNFDPDTAGANAAEKSIGLL---TEEGFEVKIVTLDGGLDPDRFIRENGVRA 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + A +L Q +P+ + + LP I +VP R + Sbjct: 359 YMDALRTARRYQEYLIERARVQFPPRSPEAKVKALNFLLPHIRRVPNAIARNEFATDAAQ 418 Query: 418 KLGILD---DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP--LE 472 LGI +L++ + K + S L R +L+ A L Sbjct: 419 SLGIDSSLMREELKQAVAKRRDFVASAQAYPLTRAEQILLMAFAAAPGSEARHTAEAALA 478 Query: 473 NLDENKLPGLGLFRELVNTCLS-QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 E+ +++V+ + + G+ L + L L + D A Sbjct: 479 RHSEDFARIREDVQQMVHLLRAREAGIDP---LAAMQEPQQKQMLASLFVSVH--DAEPA 533 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSN--EERLELWTLNQELAKK 581 ++ + LE +Q EL + E+ L+L QE+ ++ Sbjct: 534 SAEVEAAMLTVRRLALEQQQRELRGSILEAERTGRMEDALQLTRHAQEITRR 585 >UniRef50_C6X675 DNA primase n=2 Tax=Flavobacteriaceae RepID=C6X675_FLAB3 Length = 640 Score = 446 bits (1148), Expect = e-124, Method: Composition-based stats. Identities = 155/538 (28%), Positives = 268/538 (49%), Gaps = 32/538 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ + + + ++I V+LK+ G NF PFH+EKTPSF V+ KQ + F Sbjct: 1 MISKATIDKIFSTIRVEEIIGEYVQLKRAGSNFKGLSPFHDEKTPSFVVSPSKQIWKDFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG--SGPSQIERHQRQTLYQLMD 121 G G AI FLM + + E + A + +E+ + + + + ++ LY++ + Sbjct: 61 SGKGGTAISFLMEIESFTYPEALRHAAKKYGIEIEEDKRELTVEEKQSQTDKEVLYKIHE 120 Query: 122 GLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 N+F+Q+ L+ + Y ++R L ++I++F +G+AP D +++ Sbjct: 121 IANSFFQEQLETEEGRAIGYSYFKERDLRDDIISKFQLGYAPEQKDAFTSFAIDKGYSKE 180 Query: 181 SLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 L +G+ + + DRFRERV+FPI GRV+GFGGR+L N+ T KYLNSPET+ Sbjct: 181 ILEKSGLSIYPENAPNGIDRFRERVIFPIHSFSGRVLGFGGRILRNNVKTAKYLNSPETE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK + LYGL +++Q ++ N L+VEGYMDV+AL Q GI + V+S GT+ T + I+L+ Sbjct: 241 IYHKSQVLYGLNQSKQAISKNNLCLLVEGYMDVIALHQAGIEHVVSSSGTALTVEQIKLI 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T NV +DGD AG A++R+++ L ++ +R + PDG+DPD+ RK ++ Sbjct: 301 KRLTENVTILFDGDAAGIKASFRSIDMLL---SESMNIRILLFPDGDDPDSFARKHPQDF 357 Query: 358 FEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 E + +A F L+ + P +A + ++ V + +E+ Sbjct: 358 VERFISTEAKDFIEFKAEVLLKEAG-GDPAKKAEAIRDIVKSVAFVQNALKQEVYLKEVS 416 Query: 417 NKLGILDDSQLERLMPKA--AESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 K G+ + S L + + VS + + T ++ + PE + PL L Sbjct: 417 TKFGLSEQSLFNELNVQQQMRKQQVSPQTRKEQETPQKLQV-----VPENTVTIDPLLVL 471 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 +E +LV L ++++ NN + + +++ E Sbjct: 472 EE----------KLVELMLKYGD----RVVDRVDEENNGYQITVIEEIIGHLEEDQCE 515 >UniRef50_C7PKU5 DNA primase n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PKU5_CHIPD Length = 662 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 157/507 (30%), Positives = 251/507 (49%), Gaps = 22/507 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I +L+R DIV+++ VKLKK+G N+ CPFHNEK+PSFTV K+ + CFG Sbjct: 1 MISQNTIQQILSRIDIVEIVGNFVKLKKRGANYLGLCPFHNEKSPSFTVTPSKEIFKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNAI F+M ++K +VE + LA +++ + S + ++ +LY + + Sbjct: 61 CGQSGNAIKFIMEHEKYSYVEALRWLAQKYDVPIEETEVSPEVRQQQLMADSLYIINNFA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ +L Y E+RG + E I +F +G++ WD K N Sbjct: 121 REYFSNTLFNTEEGQNVGLSYFEERGFTQETIRKFQLGYSLNTWDAFTKTALAKGYNLDY 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 L G++ ++ + D +R RV+FPI ++ G+V+GFG R+L + PKY+NSPE +I+ Sbjct: 181 LQKTGLVTVRNE-QPGDNYRGRVIFPIHNQSGKVLGFGARILVKNDRAPKYVNSPENEIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R LYG Y A+ + N L+VEGY DVV+L Q GI VAS GTS T ++L+ + Sbjct: 240 VKNRVLYGTYFARHAIDKLNECLLVEGYTDVVSLHQAGIENVVASSGTSLTQHQLRLIKK 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TNN+ +DGD AG AA R L+ A+ +G ++ + +PD EDPD+ V+K G +AF Sbjct: 300 YTNNLTILFDGDNAGVKAALRGLDMAIE---EGLNVKLVLIPDKEDPDSYVQKIGADAFR 356 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV---PGETLRIYLRQEL 415 + F M + + +++L IS++ T + ++ Sbjct: 357 EFIANNKQDFVLFKLQISMQEAG-NDSSRKSQLVNEIAETISKIDKTEDFTRQQDYIRQC 415 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELA-TLVPPLENL 474 L I + + L+ K + Q R + +L+ + +E + Sbjct: 416 SQLLKIDEQGLIN-LVNKFIRERFQKKEQQFNRENNNNNNAAPAMDDDLSPEAIAAMEAM 474 Query: 475 DENKLPGLGLF-------RELVNTCLS 494 + P + F RELV L Sbjct: 475 ENGGEPAVNFFNPDEKQERELVKILLR 501 >UniRef50_D0LP35 DNA primase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LP35_HALO1 Length = 605 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 161/614 (26%), Positives = 267/614 (43%), Gaps = 52/614 (8%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP ++++ R DIV +I V L+K G+N CPFH+EKTPSF VNG+K+F++CF Sbjct: 2 GLIPEDTVHEIRERADIVAVIGDHVSLRKAGRNHKGLCPFHHEKTPSFNVNGDKRFFYCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS-QIERHQRQTLYQLMD 121 GC G+ F+M Y+ F E E LA+ + +P P+ + +R +R + ++ Sbjct: 62 GCQKKGDVFTFVMEYEGKSFTEAAETLASRFGISIPESRPESPALRRQRGERSRMLEINA 121 Query: 122 GLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ L+ P R YL +RG+ F +G+AP W + + + Sbjct: 122 LATEFFAAVLRDPERGAPGRAYLAERGIDEATANSFQLGYAPDQWRELGEFLERKRVPAE 181 Query: 181 SLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVL------GNDT---PKY 230 G+LV + G YDRFR R+M P+ G V GF GR+L +D KY Sbjct: 182 LAAKVGLLVKQPRAGGYYDRFRHRLMCPVVMPGGEVAGFSGRLLPSPEQDEDDERKGAKY 241 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 +NSPE+ ++ K R L+GL+ A+ E R ++VEG DV+ + Q+G AVA LGT+ T Sbjct: 242 INSPESPVYKKSRLLFGLHLARDAFREKRRAVLVEGNFDVIHMHQHGFAEAVAPLGTALT 301 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 + I L R + V+ YDGD+AGR A +ALE + T ++R LP G DPD+++ Sbjct: 302 DEQIGQLRRLADEVVLLYDGDKAGRAATLKALEALVASDT---KVRIAALPAGADPDSML 358 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + + +A P + + + + + DGR+ A L+ V T R Sbjct: 359 LTGRVQELAESLTRAQPAIEYFVHDVWTR-SARSADGRSEALDEAARLLVHVTNPTKRDL 417 Query: 411 LRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR------------------ 452 + + N + + + + R M + + G R + + R Sbjct: 418 IIDTIANGMSVSPE-LVRRAMQRGNQRGDQRNQGRHRDADERRFEQPPPPQPPAAPVQPP 476 Query: 453 -----ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY 507 L+ +L +P+L + E + G R++ + + Sbjct: 477 PREELNLLAILADHPDLLEVAEDKEVVSFLTD---GRLRDIYFAARQGSSMLSSA----- 528 Query: 508 RGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR---ERTHGLS 564 + + K + A ++L + R ++L + R G Sbjct: 529 -PEDIGPLIAKYVLAGTYASVEDPAHCLDEALQRLRAGRSRTRLQQLQKQAYDARRRGDV 587 Query: 565 NEERLELWTLNQEL 578 ER + + + Sbjct: 588 ALERRLVGEILKTR 601 >UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 Length = 577 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 164/583 (28%), Positives = 275/583 (47%), Gaps = 29/583 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G + F++++ R +IVD+I V LKK GKN+ CPFH EKTPSF V+ +K YHCF Sbjct: 2 GLVWEDFVDEVKQRVNIVDVISRYVNLKKTGKNYVGLCPFHQEKTPSFYVSPDKGLYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ FL+NY L F E +EELA LE+P + + + ++ Sbjct: 62 GCGAAGDVFTFLINYRNLTFREALEELAREAGLEIP-----KKEEQISTEANIVLEINKA 116 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + TFY L + YL+KRG+S E+ +F +G+AP +L+ ++ + Sbjct: 117 VATFYHIYLNSKYGAEGKLYLKKRGISSEIQEKFLLGYAPLNPTLLLRYLEKKGFSKDDI 176 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I A +L D F RV+FPI + RG+VIGFGGR L + PKYLNSPE++ F KG Sbjct: 177 IKAKVLYFVRD-EWKDPFAGRVIFPIVNPRGKVIGFGGRSLTGEEPKYLNSPESEFFSKG 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + LY LY+A++ + ++VEGYMD ++L Q GI VASLGT+ T+ +LL TN Sbjct: 236 KNLYALYQAKESIKKEGEAILVEGYMDAISLHQAGITNVVASLGTAFTSHQAKLLKSYTN 295 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLP-DGEDPDTLVRKEGKEAFEAR 361 VI YD D AG A RAL +G ++ ++ LP D +DPD + K KE F Sbjct: 296 KVILSYDQDSAGYQAGKRALSLL---EVEGIEVYWLSLPKDVKDPDEFIHKYSKEEFLKF 352 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI----YLRQELGN 417 ++++ P FL + + + ++ + + + I + ++ + Sbjct: 353 VKESKPSLDFLIENTLS-LPMNFKERLEEIIEILTSSILRSKNILVQQEKIKQYLPLISK 411 Query: 418 KLGILDDSQLERLMPK--AAESGVSRPVPQLKR----TTMRILIGLLVQNPELATLVPPL 471 +LG+ ++ + + + + S S ++ R + ++ L+ + + + Sbjct: 412 RLGVPEEGIQKEIQKRIFSDRSYKSNVKIEITRYFGVSKTEEVLLGLILLGINNSQIKNM 471 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 D + L++E++ G + + L + +S ++ ++ Sbjct: 472 SPEDFS----FPLYQEVLKKWRVWEG-SLEEFLNLWDEDKRVLIDRAISSGEEFINQEDI 526 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 D + ++ LI +E+ + + Sbjct: 527 IPFLWDHFQKLR---IKKEINRLIEELSKLDDPIKEKELMEEI 566 >UniRef50_A9B4A9 DNA primase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4A9_HERA2 Length = 645 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 177/615 (28%), Positives = 278/615 (45%), Gaps = 56/615 (9%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCG 65 I+D+ R DIV I V L+K G+N+ CPFH N +TP+FTV + YHCFGC Sbjct: 2 NSVIDDIKERIDIVSFISDYVPLRKAGRNWVGFCPFHSNTRTPAFTVFADSNSYHCFGCK 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G DFLM + ++F E + +LAA ++ + E R + +L Sbjct: 62 ASGTIFDFLMQREGIDFPEALNQLAARAGVQ--LRQRTAQDDQEDVLRSRMLELNAAAAR 119 Query: 126 FY-QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN-PENRQSLI 183 F+ Q LQ P A R Y+E+RGL+ + + +F +G+A W ++L N + Sbjct: 120 FWSHQLLQSPKAAHVRSYIEQRGLTPQTVEQFQLGYASEDWSSLLGYLHDRHGANPSEVA 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 + G+ + +QG YDRFR R+MFPI + +G+++GFGGR+LG+ PKY+NSP+T +F K Sbjct: 180 EVGLALEREQGGYYDRFRGRLMFPIHNAKGQIVGFGGRILGDGHPKYINSPQTLLFDKSS 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL++A++ + ++VVEGY+DV+ Q G +A +GT+ T H L + T Sbjct: 240 LLYGLFQARETIRSTDSVVVVEGYVDVIMAHQAGFRNVLAPMGTALTDVHAGQLNKMTKR 299 Query: 304 VICCYDGDRAGRDAAWRALETALPYM------------------TDGRQLRFMFLPDGED 345 + DGD AG+ AA R LET + ++ LPDG D Sbjct: 300 ITLAMDGDAAGQSAALRGLETLRETLDTHVRPVPTASGMLRWERELDATIKIALLPDGRD 359 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD +VR E + + + A PL F +L +DL++ G++ PL++Q+ Sbjct: 360 PDDIVRNN-PEEWRSLIANAQPLMDFYLATLTRGLDLNSAKGKSTAVERLTPLLNQIADP 418 Query: 406 TLRIYLRQELGNKLGILD---------DSQLERLMPKAAESGVSRPVPQ---LKRTTMR- 452 + + Q L N++ I D + P +S + P P L++ R Sbjct: 419 VEKAHYIQRLANQIKIDQRLIEGSIGGDQPERQRKPNHRQSRPAAPPPVFSILEQEARRE 478 Query: 453 -ILIGLLVQNPELATLVPPLENLDENKLPGLGLF--------------RELVNTCLSQPG 497 L+ LL++ P++ +V D P L R L + S Sbjct: 479 DFLLSLLIRFPQVQAVVSEQLRDDLAAAPTLRELWSGDVSELFERVENRVLWDLWRSAQA 538 Query: 498 LTTGQLLEHYRGTN--NAATLEKLSMWDDIADKNI--AEQTFTDSLNHMFDSLLELRQEE 553 + T +E A E+L WD + + L + L + + Sbjct: 539 MATPNPIEWLETVPAELQAHGERLLNWDHAPPTRSFRVTREAEECLRPLRHRLGKRWSDR 598 Query: 554 LIARERTHGLSNEER 568 L +ER Sbjct: 599 LGQIIAAAEPDQQER 613 >UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6INY0_RHOCS Length = 620 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 198/612 (32%), Positives = 286/612 (46%), Gaps = 35/612 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P F+ +L AR + D++ R++L + G + A CPFH EKTPSF VN K F+H Sbjct: 1 MA--LPPNFLEELRARLSLSDVVMKRMRLIRAGHEYKAPCPFHKEKTPSFYVNDAKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F+M +D L F+E VE LA L VP + ++ ER + +L+ L+ Sbjct: 59 CFGCGAHGDAIAFVMRHDNLSFMEAVELLAGEAGLSVPKASPEAVARFERQK--SLFDLV 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + ++Q L P A +YL RGL + IARF +G+AP + Sbjct: 117 ERATRHFEQQLGLPAGRQALEYLRGRGLDDDTIARFRLGYAPHDGAGLRAELEQAGYGEA 176 Query: 181 SLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +I+AG+ + GR F RV+FP+ D+RGRV+ FG R+L D PKY+NS +T +F Sbjct: 177 DMIEAGLFKRPEPGRGLRAFFWNRVIFPVTDRRGRVVAFGARLLSGDGPKYINSGDTPLF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG LY L A+Q E ++V EGYMDV++ G + AVA LGT+ T I L++ Sbjct: 237 HKGNILYNLSRARQAAVEGRPVVVTEGYMDVISCVTAGFDGAVAPLGTALTEAQILELWK 296 Query: 300 ATNN----VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 I C+DGD AGR AA RA+E LP + R FLP+ EDPD+L+R G Sbjct: 297 LAPEGRRTPILCFDGDSAGRRAAARAVERLLPLLLPDHSARVAFLPEKEDPDSLIRAGGA 356 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF+A +++A PL+ L++ DL+ PD RA L + + +R Q++ Sbjct: 357 AAFQAVLDRARPLADVLWDLEAQGRDLAQPDARAGLEAALAARCAAIQDARVRRAYEQDM 416 Query: 416 GNKLGILDDSQLERLMPKAAESGVSR-------PVPQLK-------------RTTMRILI 455 ++L +A PV L R R+L+ Sbjct: 417 RDRLFAAARQGRGGRGGRAGTGRRGMRPLVDGLPVSPLYDARFRTGLIRTEPRQMERLLL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFR-ELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 ++ +PEL P L R +V + L +L H + Sbjct: 477 LPVLHHPELFEEFGEQLAEAVFATPALETLRCAMVEVLTANSALDAAELHSHLSSRGLSE 536 Query: 515 TLEKLSMWDDI---ADKNIAEQTFTDSLNHMFDSLLELRQEELI--ARERTHGLSNEERL 569 TL+ L D + T +S Q EL R S E Sbjct: 537 TLDGLLSADAPRFAHPGASIDAARTGWQGVWLNSQEVALQAELRDAERRLAEQFSQENLA 596 Query: 570 ELWTLNQELAKK 581 + L QE ++ Sbjct: 597 RVQALRQEALRR 608 >UniRef50_C0BKP6 DNA primase n=3 Tax=Flavobacteria RepID=C0BKP6_9BACT Length = 662 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 152/559 (27%), Positives = 258/559 (46%), Gaps = 32/559 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ + I ++I V+LKK G NF PF E++PSF V+ KQ + F Sbjct: 1 MISKNTIDKVYETARIEEVIGDFVQLKKSGANFKGLSPFTEERSPSFMVSPVKQIWKDFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN + F+M ++ + E + LA + +E+ S + ++R+++Y + + Sbjct: 61 SGKGGNVVAFVMEHEHFTYPEAIRYLAKKYQIEIEETIQSDEQKEAANERESMYLVSEYA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ + L A A Y +RG + E I +F +G+ WD K N + + Sbjct: 121 ARYFSEVLLTSAAGQAIGLSYFRERGFTDETIKKFELGYCLDEWDGFTKSAIENKYDIKY 180 Query: 182 LIDAGMLVTNDQG-----RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSP 234 L G+ + +++DRF+ RVMFPI GRV+GFGGR+L D KYLNSP Sbjct: 181 LEATGLTIVKPTNEQATAKTFDRFKGRVMFPIHSMSGRVLGFGGRILTQDKKAAKYLNSP 240 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 E+DI++K + LYG+Y A+Q A+ + +VEGY DV+ + Q GI+ V+S GT+ T+D I Sbjct: 241 ESDIYNKSKVLYGIYIAKQAIAKQDNCYLVEGYTDVIQMHQSGIHNVVSSSGTALTSDQI 300 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +LL R T N+ +DGD AG A+ R ++ L G ++ P+GEDPD+ +K Sbjct: 301 RLLSRLTKNITVLFDGDAAGLRASIRGIDLILE---QGMNVKICTFPEGEDPDSFSKKHV 357 Query: 355 KEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E +E + F + L+ + + P RA + I+++P R Q Sbjct: 358 LELLTEYLETNSQDFIQFKASILVKEA-ANDPVKRAETIRDIVGSIAKIPDAIQREVYLQ 416 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 + I + L + + ++ V Q ++ PE P +E Sbjct: 417 SCAQIMDISEQVLYNTLAQVSKTAASAKGVLQKSGGVPEERFKVV--KPE----APEVEK 470 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 L+ + L ++++ L + +N A L + K + ++ Sbjct: 471 LNVQWV----LEKKIIEILLLYGN-HKATFEDLILASNEAGELV-------LTPKKVEQK 518 Query: 534 TFTDSLNHMFDSLLELRQE 552 F + + +EL Q+ Sbjct: 519 VFEKVYLDLQEDEIELTQD 537 >UniRef50_Q6A956 DNA primase n=3 Tax=Propionibacterium acnes RepID=Q6A956_PROAC Length = 623 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 149/604 (24%), Positives = 251/604 (41%), Gaps = 56/604 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI I + R I +++ V L+ G + CPFH+EKTPSF V + + Sbjct: 7 MAGRINEEDIALVRERARIDEVVGEYVTLRHAGGDSLKGLCPFHDEKTPSFQVTPSRGLF 66 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGCG G+ I F+ D L FVE V+ LA +++ P +E R + Sbjct: 67 YCFGCGEGGDTISFVQKIDNLTFVEAVQRLADKVGVQLRIIDDGRPG-LEPGLRMQILAA 125 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q + AR+++ RG S + +F +G+AP + Sbjct: 126 NEAAAEFFQSQMSTDEGRIAREFVAGRGFSPDAAVQFGMGYAPRDGHVLRDHLMAKGFAP 185 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSPET 236 + LI++G++ + + +D F+ RV++PI+D V+GFG R + +D KY+N+PET Sbjct: 186 KVLIESGLVRS----QGWDFFQGRVLWPIKDSGKSVLGFGARRVYDDDRLPAKYVNTPET 241 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 ++ K LYGL A+ + + ++ ++VEGY DV+A GI+ AVA+ GT+ DH +L Sbjct: 242 PVYKKSHVLYGLDLARANIGKKSQAVIVEGYTDVMAAHLSGIDTAVAACGTAFGDDHARL 301 Query: 297 LFR-------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 + R VI +DGD AG+ AA + + + Q P G DP L Sbjct: 302 IQRLMGNSGSLNGEVIFTFDGDAAGQKAALKVFRGDNQFSS---QTYVAVEPTGLDPCDL 358 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + + G EA + + +PL ++ + + Q DL DGR A PL++ + ++L Sbjct: 359 LMQRGPEAVRELVARRIPLYRYVMENTVSQFDLDRADGRVAAIRAAAPLVTSIRDQSLVD 418 Query: 410 YLRQELGNKLGILDDSQLERLM----------------PKAAESGVSRPVP---QLKRTT 450 +EL +G D + P + G P P + + Sbjct: 419 GYLRELSQVVGTDVDLVRREVSHTRRQHRSEPQLTIVPPPEPQQGSGIPWPDPADVSLSA 478 Query: 451 MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEH---- 506 R + L +Q+P+L +++ + P E V T ++ E Sbjct: 479 ERGFLKLALQHPDLFNEEWDQVEVEDLRHPAYQAVFEAVLAVPRGQDRWTEKVSEATPDP 538 Query: 507 --------------YRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQE 552 R + E + + L + Sbjct: 539 QVKQLEVALLVEPVLREEPDRDYAEAYAARVRLLSITDDIANLKSRLQRTNPNQDRKLYN 598 Query: 553 ELIA 556 + + Sbjct: 599 AMFS 602 >UniRef50_A0M544 DNA primase n=3 Tax=Flavobacteria RepID=A0M544_GRAFK Length = 652 Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats. Identities = 166/591 (28%), Positives = 279/591 (47%), Gaps = 40/591 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I+++ + ++I V+LK+ G N PF +E++PSF V+ KQ + F Sbjct: 1 MISRTTIDNVFETARVEEVIGDFVQLKRSGSNLKGLSPFTDERSPSFMVSPVKQIWKDFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN + FLM ++ + E ++ LA + +E+ S + ++R+++Y + + Sbjct: 61 SGKGGNVVAFLMEHEHFNYPEAIKYLAKKYGIEIEETEQSDEQKELANERESMYLVSEYA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 N F+Q+ + + A Y ++RG S E I +F +G++P W+ K + + Sbjct: 121 NKFFQKKMHETDEGQAIGLSYFKERGFSAETIKKFDLGYSPDDWEIFTKTALDDGYKLEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L G+ + + R +DRF+ RVMFPI GRV+GFGGR+L N KYLNSPE+DI+ Sbjct: 181 LEKTGLSIVKENKR-FDRFKGRVMFPIHSMSGRVLGFGGRILSNTKKAAKYLNSPESDIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK + LYG+Y A+Q A+ + +VEGY DV+ Q GI V+S GT+ T + I+L+ R Sbjct: 240 HKSKVLYGIYYAKQAIAKEDNCYLVEGYTDVIQFHQSGIENTVSSSGTALTPEQIRLINR 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T N+ +DGD AG A+ R ++ L G ++ P+GEDPD+ R ++ Sbjct: 300 LTKNITVLFDGDAAGTRASLRGIDLILE---QGMNVKVCPFPEGEDPDSFARANNEDELR 356 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + E + + SL+ + P +A L + I+++P R QE Sbjct: 357 EFLEENSYDFITYK-ASLLMDESKNDPVKKAGLIRDMVNSIAKIPDNIQREVYLQECSRI 415 Query: 419 LGILDD------SQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLE 472 + I +D +Q+E+ ++ R + +K + + + L Sbjct: 416 MDISEDVLYATLAQIEKKDNPSSGGSKKRKMEVVKEESTPKV------------KIDHLY 463 Query: 473 NLDENKLPGLGLF---RELVNTCLSQPGLTTGQL-LEHYRGTNNAATLEKLSMWDDIA-- 526 L+ N + L L+ E L + TG+L LE + ++ L + +D Sbjct: 464 ILERNIIKILLLYGNKEEEFEDLLLKQNEDTGELELEPEKQSSKVFEKIYLDLQEDEIAF 523 Query: 527 ---DKNIAEQTFTDSLNHMFDSLLELRQEEL---IARERTHGLSNEERLEL 571 D Q LN + +E +L ++E T L EE+ EL Sbjct: 524 SNEDFRKLYQLLITKLNSEDEVAIENIINDLETSQSKEVTDILMQEEQYEL 574 >UniRef50_C7XEU1 Predicted protein n=1 Tax=Parabacteroides sp. D13 RepID=C7XEU1_9PORP Length = 1322 Score = 445 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 133/459 (28%), Positives = 237/459 (51%), Gaps = 16/459 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ I++++ +IVD+I VKLKK G N+ CPFH +K S V+ K + CFG Sbjct: 1 MIPQDVIDNIINTANIVDVIGDYVKLKKAGVNYKGVCPFHGDKDASLVVSPAKNIWKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN I F+ ++ + F E V+ +A+ +N+ VP + + + +R+ L + Sbjct: 61 CGKGGNVITFVKEHEGISFFEAVKLVASKYNITVPERELTDDERKKTKEREALQICLTFA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L++ A +YLE RG++ +++++ G++ + + + + ++ Sbjct: 121 QETFTAFLKK---KEAAEYLETRGITPNILSKYGAGYSSSMFTALTELGSQKGYDMAAME 177 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHKG 242 AG++ + G+ +DRF R+ FP G VIGF GR L DT KYLNSPET +FHKG Sbjct: 178 KAGLITRKENGKIFDRFVNRITFPFYSLSGLVIGFTGRSLEKDTQCKYLNSPETPLFHKG 237 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + L+G+Y+A+Q+ ++ ++ +VEG DV++ Q G V GT+ T D ++++ + T Sbjct: 238 KTLFGIYQARQEISKSDKCYLVEGQFDVLSFVQSGYPNTVCGSGTALTLDQVRIIKKFTR 297 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 NV YDGD AG A+ R ++ L +G +R + LP+GEDPD+ RK G E + Sbjct: 298 NVTAVYDGDAAGMKASVRNMDIML---AEGMNVRAVLLPEGEDPDSFARKMGTEKLAKFL 354 Query: 363 EQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ +F++ + ++D P + + + IS VP + R L + Sbjct: 355 KKQETDFISFIYKAFESEMD--DPIRKTEVLRIIAQSISVVPDKLQRQAYIVSLAERFNA 412 Query: 422 LDD------SQLERLMPKAAESGVSRPVPQLKRTTMRIL 454 + ++L+ + K+ + ++P ++ Sbjct: 413 DGELITNLVAELQAVGKKSVPAQPTQPGLTGVEEAEELV 451 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae... 674 0.0 UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=... 619 e-176 UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=P... 618 e-175 UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1... 612 e-173 UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO 609 e-173 UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 1... 591 e-167 UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q... 589 e-166 UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BN... 587 e-166 UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus Rep... 586 e-166 UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii... 582 e-164 UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0... 581 e-164 UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y... 580 e-164 UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC 577 e-163 UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3... 575 e-162 UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7... 574 e-162 UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium... 573 e-162 UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS 569 e-161 UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF 564 e-159 UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix ... 564 e-159 UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN 563 e-159 UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A... 562 e-158 UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AH... 561 e-158 UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans ... 559 e-158 UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC22... 559 e-157 UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens ... 555 e-156 UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PR... 554 e-156 UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 R... 554 e-156 UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=... 553 e-156 UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB 552 e-155 UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P... 552 e-155 UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI... 550 e-155 UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK 550 e-155 UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK 545 e-153 UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6W... 545 e-153 UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum Rep... 544 e-153 UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivora... 541 e-152 UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID... 539 e-152 UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q... 539 e-152 UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC ... 539 e-151 UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PR... 538 e-151 UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_B... 538 e-151 UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA... 537 e-151 UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 537 e-151 UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20... 537 e-151 UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 10... 533 e-150 UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7... 532 e-149 UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU 531 e-149 UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_E... 531 e-149 UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7... 530 e-149 UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47... 530 e-149 UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum... 529 e-149 UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J4... 529 e-148 UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K... 528 e-148 UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT 528 e-148 UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG... 528 e-148 UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS 528 e-148 UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 527 e-148 UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA 526 e-148 UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus ... 526 e-148 UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans... 526 e-147 UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans D... 525 e-147 UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaer... 525 e-147 UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID... 525 e-147 UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL... 524 e-147 UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd... 523 e-147 UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E... 522 e-146 UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DS... 521 e-146 UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB 520 e-146 UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM... 520 e-146 UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO 520 e-146 UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168... 519 e-146 UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6T... 519 e-146 UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34... 517 e-145 UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS 516 e-145 UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxida... 516 e-144 UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM ... 515 e-144 UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN 514 e-144 UniRef50_C6CTW0 DNA primase n=4 Tax=Bacillales RepID=C6CTW0_PAESJ 514 e-144 UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9X... 513 e-144 UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199... 513 e-144 UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldar... 512 e-143 UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H... 512 e-143 UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5... 512 e-143 UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV 512 e-143 UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin4... 511 e-143 UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID... 511 e-143 UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_... 510 e-143 UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius... 509 e-143 UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 425... 509 e-143 UniRef50_B1HTI3 DNA primase n=5 Tax=Bacteria RepID=B1HTI3_LYSSC 509 e-142 UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H... 509 e-142 UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bac... 509 e-142 UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitat... 509 e-142 UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp.... 509 e-142 UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB... 508 e-142 UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1... 507 e-142 UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coproco... 507 e-142 UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis ... 506 e-142 UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_... 506 e-141 UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis Rep... 506 e-141 UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 Re... 505 e-141 UniRef50_C7H3D7 DNA primase n=2 Tax=Faecalibacterium prausnitzii... 504 e-141 UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanu... 504 e-141 UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_... 503 e-141 UniRef50_B0RBC7 DNA primase n=5 Tax=Actinobacteria (class) RepID... 502 e-140 UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_... 502 e-140 UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM 500 e-140 UniRef50_C4L400 DNA primase n=2 Tax=Exiguobacterium RepID=C4L400... 500 e-140 UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 Rep... 500 e-140 UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenen... 499 e-139 UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315... 499 e-139 UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9... 499 e-139 UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostri... 499 e-139 UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH 498 e-139 UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia ... 498 e-139 UniRef50_B0PFC1 Putative uncharacterized protein n=1 Tax=Anaerot... 498 e-139 UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei19... 498 e-139 UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6V... 497 e-139 UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATC... 497 e-139 UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC... 497 e-139 UniRef50_C7MD61 DNA primase n=6 Tax=Actinomycetales RepID=C7MD61... 497 e-139 UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA 496 e-139 UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC ... 496 e-139 UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE 496 e-138 UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 Re... 496 e-138 UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistip... 495 e-138 UniRef50_D1BUG1 DNA primase n=3 Tax=Micrococcineae RepID=D1BUG1_... 495 e-138 UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_... 495 e-138 UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 494 e-138 UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9... 494 e-138 UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4... 494 e-138 UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855... 494 e-138 UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3... 493 e-138 UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR... 493 e-138 UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QC... 493 e-138 UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 492 e-137 UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense... 492 e-137 UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 1261... 492 e-137 UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID... 491 e-137 UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM... 491 e-137 UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum D... 491 e-137 UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostri... 490 e-137 UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_... 489 e-137 UniRef50_O52200 DNA primase n=45 Tax=Actinomycetales RepID=PRIM_... 489 e-137 UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID... 489 e-136 UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 489 e-136 UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleoca... 489 e-136 UniRef50_A7BE18 Putative uncharacterized protein n=1 Tax=Actinom... 489 e-136 UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8... 489 e-136 UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WE... 488 e-136 UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_T... 488 e-136 UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO 488 e-136 UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DS... 487 e-136 UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spin... 487 e-136 UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15... 486 e-136 UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE 486 e-136 UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens... 486 e-135 UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_... 486 e-135 UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 1... 485 e-135 UniRef50_A7NG02 DNA primase n=2 Tax=Roseiflexus RepID=A7NG02_ROSCS 485 e-135 UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD 484 e-135 UniRef50_UPI0001C377B6 DNA primase n=1 Tax=Ruminococcus flavefac... 484 e-135 UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DS... 484 e-135 UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonel... 484 e-135 UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC... 484 e-135 UniRef50_C5RBJ6 DNA primase n=1 Tax=Weissella paramesenteroides ... 483 e-135 UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans... 483 e-134 UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9... 482 e-134 UniRef50_UPI00016C0A50 DNA primase n=1 Tax=Epulopiscium sp. 'N.t... 482 e-134 UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium AT... 482 e-134 UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp.... 482 e-134 UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 ... 482 e-134 UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_S... 481 e-134 UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PR... 481 e-134 UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 481 e-134 UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum... 481 e-134 UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903... 480 e-134 UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bactero... 480 e-134 UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 512... 480 e-134 UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_L... 479 e-134 UniRef50_Q11WL0 DNA primase n=1 Tax=Cytophaga hutchinsonii ATCC ... 479 e-133 UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E... 479 e-133 UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus ... 479 e-133 UniRef50_C3RLQ3 DNA primase n=3 Tax=Bacteria RepID=C3RLQ3_9MOLU 478 e-133 UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM... 478 e-133 UniRef50_B9YB47 Putative uncharacterized protein n=1 Tax=Holdema... 478 e-133 UniRef50_Q1IIK3 DNA primase n=1 Tax=Candidatus Koribacter versat... 477 e-133 UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella che... 477 e-133 UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collins... 477 e-133 UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR... 476 e-133 UniRef50_D1N3F9 DNA primase n=1 Tax=Victivallis vadensis ATCC BA... 476 e-133 UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodism... 476 e-132 UniRef50_D1Y6N2 DNA primase n=1 Tax=Pyramidobacter piscolens W54... 475 e-132 UniRef50_C7NH61 DNA primase n=2 Tax=Micrococcineae RepID=C7NH61_... 475 e-132 UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii C... 475 e-132 UniRef50_C1F7T6 DNA primase n=1 Tax=Acidobacterium capsulatum AT... 475 e-132 UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK 475 e-132 UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 Re... 474 e-132 UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 ... 474 e-132 UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC... 474 e-132 UniRef50_UPI000196B4EC hypothetical protein CATMIT_01301 n=1 Tax... 474 e-132 UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQ... 474 e-132 UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candida... 474 e-132 UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE 473 e-132 UniRef50_B9R233 DNA primase catalytic core, N-terminal domain fa... 473 e-131 UniRef50_C8XHB5 DNA primase n=1 Tax=Nakamurella multipartita DSM... 472 e-131 UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-... 472 e-131 UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowst... 471 e-131 UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 Re... 471 e-131 UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DS... 471 e-131 UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9I... 471 e-131 UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC21... 470 e-131 UniRef50_B1MYH3 DNA primase DnaG n=1 Tax=Leuconostoc citreum KM2... 470 e-131 UniRef50_A6LD21 DNA primase n=12 Tax=Bacteroidales RepID=A6LD21_... 470 e-131 UniRef50_Q6A956 DNA primase n=3 Tax=Propionibacterium acnes RepI... 469 e-130 UniRef50_D1B4H3 DNA primase n=2 Tax=Campylobacterales RepID=D1B4... 469 e-130 UniRef50_B8G2V7 DNA primase n=3 Tax=Chloroflexus RepID=B8G2V7_CHLAD 469 e-130 UniRef50_C9PY41 DNA primase n=8 Tax=Prevotella RepID=C9PY41_9BACT 469 e-130 UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_C... 469 e-130 UniRef50_A6Q1G7 DNA primase DnaG n=7 Tax=Epsilonproteobacteria R... 468 e-130 UniRef50_A6WDD6 DNA primase n=2 Tax=Actinomycetales RepID=A6WDD6... 468 e-130 UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5... 467 e-130 UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q... 467 e-130 UniRef50_B0VJJ5 DNA primase n=1 Tax=Candidatus Cloacamonas acida... 466 e-130 UniRef50_B0SHG4 DNA primase n=2 Tax=Leptospira biflexa serovar P... 466 e-130 UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asia... 466 e-129 UniRef50_Q30ZP6 DNA primase n=1 Tax=Desulfovibrio desulfuricans ... 465 e-129 UniRef50_Q6AQ52 Related to DNA primase (DnaG) n=1 Tax=Desulfotal... 465 e-129 UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1... 464 e-129 UniRef50_D0LP35 DNA primase n=1 Tax=Haliangium ochraceum DSM 143... 464 e-129 UniRef50_D2NNW9 DNA primase n=2 Tax=Rothia mucilaginosa RepID=D2... 464 e-129 UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 464 e-129 UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A... 464 e-129 UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 463 e-129 UniRef50_A6C4Z6 DNA primase n=1 Tax=Planctomyces maris DSM 8797 ... 463 e-129 UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans P... 463 e-129 UniRef50_Q83GI9 DNA primase n=2 Tax=Tropheryma whipplei RepID=Q8... 462 e-128 UniRef50_O83505 DNA primase n=3 Tax=Treponema RepID=PRIM_TREPA 462 e-128 UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rh... 462 e-128 UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 ... 462 e-128 UniRef50_A9B4A9 DNA primase n=1 Tax=Herpetosiphon aurantiacus AT... 462 e-128 UniRef50_D1XXM0 DNA primase n=1 Tax=Prevotella bivia JCVIHMP010 ... 461 e-128 UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT... 460 e-128 UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 ... 460 e-128 UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS170... 460 e-128 UniRef50_C2G0R6 DNA primase n=2 Tax=Sphingobacterium spiritivoru... 460 e-128 UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteri... 459 e-127 UniRef50_C8NEW8 DNA primase n=2 Tax=Granulicatella RepID=C8NEW8_... 459 e-127 UniRef50_A4XHW3 DNA primase n=1 Tax=Caldicellulosiruptor sacchar... 459 e-127 UniRef50_B9E6V3 Putative uncharacterized protein n=1 Tax=Macroco... 459 e-127 Sequences not found previously or not previously below threshold: >UniRef50_C5BH75 DNA primase, putative n=3 Tax=Enterobacteriaceae RepID=C5BH75_EDWI9 Length = 599 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 422/581 (72%), Positives = 492/581 (84%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIPRVFINDLLARTDIV+L+DARVKLKKQGKN+HACCPFH+EKTPSFTVN +KQFYH Sbjct: 18 MAGRIPRVFINDLLARTDIVELVDARVKLKKQGKNYHACCPFHSEKTPSFTVNADKQFYH 77 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAIDFLMNYD+LEFVE++EELA M LEVP+E+GSGPSQ+ERHQRQ LYQLM Sbjct: 78 CFGCGAHGNAIDFLMNYDRLEFVESIEELATMAGLEVPYESGSGPSQMERHQRQNLYQLM 137 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 DGL +YQQSL+QP AT A+QYL RG+S ++ FAIG+AP GWDN LKRFG + R Sbjct: 138 DGLCGYYQQSLRQPGATQAQQYLTGRGMSQAIMDSFAIGYAPQGWDNALKRFGRDAGGRT 197 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 +L DAGMLV N+ GRSYDRFR+R+M PIRDKRGRVI FGGRVLGN TPKYLNSPET+IFH Sbjct: 198 ALNDAGMLVNNENGRSYDRFRDRIMIPIRDKRGRVIAFGGRVLGNGTPKYLNSPETEIFH 257 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGRQL+GLYEA Q A+P RLLVVEGYMDV+ALAQYG+NYAVASLGTSTTA+HIQLLFR Sbjct: 258 KGRQLFGLYEALQHAAQPERLLVVEGYMDVIALAQYGVNYAVASLGTSTTAEHIQLLFRH 317 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+CCYDGD AGR+AAWRALETALPY++DGRQL+FMFLP+GEDPDTL+RKEG EAFE Sbjct: 318 TDSVVCCYDGDNAGREAAWRALETALPYLSDGRQLKFMFLPEGEDPDTLIRKEGAEAFER 377 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 RM A PLS FLF+SL+PQVDLSTPDGR +LS LALPLI QVPGETLR+YLRQ LG KLG Sbjct: 378 RMNDAHPLSTFLFDSLLPQVDLSTPDGRTKLSALALPLIGQVPGETLRLYLRQSLGQKLG 437 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 ILDDSQLE+L+P+ +E+ + P+LK TTMRILI LLVQNP LA VP L+ L ++ LP Sbjct: 438 ILDDSQLEKLLPRRSEAVKNYQPPRLKPTTMRILIALLVQNPALAAEVPTLDGLHQHPLP 497 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 GL LF ELV TCL+QPGLTTGQLLE YR A+ LE L+ W+ + + + +TF D+L Sbjct: 498 GLPLFIELVETCLAQPGLTTGQLLELYRDNKYASQLETLATWNHMIIEPMVLETFVDTLG 557 Query: 541 HMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++D++LE R E+LIAR RT GL+ ER E+ +LN+ LAKK Sbjct: 558 SLYDAVLEQRLEQLIARARTDGLTPAEREEVRSLNEALAKK 598 >UniRef50_Q9CLI9 DNA primase n=259 Tax=Gammaproteobacteria RepID=PRIM_PASMU Length = 582 Score = 619 bits (1597), Expect = e-176, Method: Composition-based stats. Identities = 331/583 (56%), Positives = 430/583 (73%), Gaps = 4/583 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLLA+TDIV+L+++RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRTFIDDLLAKTDIVELVNSRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQ 118 CFGCGAHGNAI FLM YDKLEFVE +EELA M LE+P E QI ++ LY+ Sbjct: 61 CFGCGAHGNAISFLMEYDKLEFVEAIEELAGMLGLEIPRENKPHFHGKQINLQTKRNLYE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 LM + FYQQ L Q + A+ YL++RGLS EVI+RF IGF P +D VL+RFG E+ Sbjct: 121 LMQEIAQFYQQQLAQHI--PAQSYLQQRGLSPEVISRFQIGFVPNSFDAVLQRFGQQKED 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +Q L D GML ++QG+ YDRFR R+MFPIRD+RG+ I FGGRVLG++ PKYLNSPE+ Sbjct: 179 QQKLFDLGMLSRSEQGKIYDRFRHRIMFPIRDRRGKTIAFGGRVLGDEKPKYLNSPESAT 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HKG +LYGLYEA Q N P LLVVEGYMDVVALAQ+G++YAVASLGT+TTA+ IQLLF Sbjct: 239 YHKGNELYGLYEALQANESPEMLLVVEGYMDVVALAQFGVDYAVASLGTATTAEQIQLLF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R+T ICCYDGDRAGR+AAWRA E ALPY+ DGRQL+F+FLPDGEDPD+ +R+ GK +F Sbjct: 299 RSTEQAICCYDGDRAGREAAWRAFENALPYLEDGRQLKFVFLPDGEDPDSFIRQHGKASF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E M++A+ LS FLF SL PQVD S+ +G+ +L+ LA+PLI ++PG+ LR+ LR L K Sbjct: 359 EQYMQKALSLSEFLFTSLAPQVDFSSKEGKTKLAALAVPLIKKIPGDMLRLSLRNTLAQK 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 LGILD +QLE L+P +E ++ +KRT MR+LIGLL+QNPELA LVP L L Sbjct: 419 LGILDQAQLESLIPSYSEMKITASPQPVKRTPMRVLIGLLLQNPELAQLVPDLSPLRTLN 478 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 PGL L +L C + G+TTGQ+LE++R T ++ LE L+ W+ + + E+TF + Sbjct: 479 EPGLDLLEKLTALCQEKVGITTGQILEYWRDTEHSKALEILASWNHLVEDTQIEETFKST 538 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 L +++ L+E + LIA++R+ GL+ ER +L L + +K Sbjct: 539 LRYLYFQLIEHEIDLLIAKDRSEGLNMNERKKLTQLLVKKQQK 581 >UniRef50_Q08346 DNA primase n=91 Tax=Gammaproteobacteria RepID=PRIM_HAEIN Length = 593 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 328/589 (55%), Positives = 420/589 (71%), Gaps = 10/589 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IPR FI+DLL ++DIVD+I+ RVKLKK G+++ ACCPFH+EKTPSFTV+ +KQFYH Sbjct: 1 MKGSIPRPFIDDLLTKSDIVDVINTRVKLKKAGRDYQACCPFHHEKTPSFTVSQKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA---GSGPSQIERHQRQTLY 117 CFGCGAHGNAI FLM+YDKLEF+E +EELAAM LE+P+E SG Q ++ LY Sbjct: 61 CFGCGAHGNAISFLMDYDKLEFIEAIEELAAMAGLEIPYEKRVNHSGKPQANYQTKRNLY 120 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +LM + TFYQ L P+ T A++YL++RGLS E+I RF IGF P D VL++FG N E Sbjct: 121 ELMQEIATFYQNQL--PLNTQAQEYLQQRGLSPEIIERFQIGFVPNAMDTVLRKFGVNRE 178 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 +Q LI+ GML ND+G YD+FR R+MFPIRDKRGR + FGGRVL ++ PKYLNSPET Sbjct: 179 EQQKLIELGMLSRNDRGNIYDKFRNRIMFPIRDKRGRTVAFGGRVLTDEKPKYLNSPETI 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +HKG++LYGLYEA Q N EP +LLVVEGYMDVVALAQ+G++YAVASLGTSTT++ IQL+ Sbjct: 239 TYHKGKELYGLYEALQTNDEPKQLLVVEGYMDVVALAQFGVDYAVASLGTSTTSEQIQLI 298 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R+T V+CCYDGDRAGRDAAWRALE ALPY+ DGRQL+F+FLPDGE+PDT +R+ GKE Sbjct: 299 LRSTEQVVCCYDGDRAGRDAAWRALENALPYLEDGRQLKFIFLPDGEEPDTYIRQYGKEK 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +E A LS F+F L PQVD ST +GR +L LA PLI Q+PGE LR+ LR L Sbjct: 359 FEEYIESAQSLSEFMFAHLSPQVDFSTKEGRGKLVALAAPLIHQIPGEMLRLSLRNMLAQ 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPV---PQLKRTTMRILIGLLVQNPELATLVPPLENL 474 KLGI D +QLE L+PK E ++ ++K+T MR++I LL+QNPEL + Sbjct: 419 KLGIFDQTQLENLIPKKLEQANTQQKVTHNKIKKTPMRMVISLLMQNPELVKRMSESGVQ 478 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 G + +L C + G+TTGQ+LE++R T+ + LE L+ WD + D++ Sbjct: 479 ALRAEAGFEILEKLTALCRQREGITTGQILEYFRNTSYSNPLEILATWDHLLDESDIINA 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN--QELAKK 581 F+ + + +E E LIA+ERT GL+NEE+ L L +E KK Sbjct: 539 FSQNYRRLNIQAIERDIEMLIAKERTEGLTNEEKTVLVHLLAGKEQQKK 587 >UniRef50_C1DIY5 DNA primase n=3 Tax=Gammaproteobacteria RepID=C1DIY5_AZOVD Length = 638 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 277/626 (44%), Positives = 381/626 (60%), Gaps = 49/626 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIV++I +RV+LKK G+N+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQGFIDDLLNRTDIVEVIGSRVQLKKTGRNYSACCPFHQEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D LEF + VEELA LEVP E GP Q + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDHLEFPQAVEELARRAGLEVPREERGGPHQPRQSADSPLYPLL 120 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +Y+Q+L+ A A YL+ RGLS + FA+GFAPPGWDN+LK GG+ + Sbjct: 121 ATAADYYRQALKSHPARQVAVDYLKGRGLSGVIARDFALGFAPPGWDNLLKHLGGDALQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++I+AG+L+ N + GR YDRFR+RV+FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIEAGLLIENAETGRRYDRFRDRVIFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA++ N + + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARRHNRDLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR AAWRALE LP + DGR+ RF+FLP+GEDPD+LVR EG+EAF Sbjct: 301 RLVPSVLFCFDGDQAGRKAAWRALEATLPSLQDGRRARFLFLPEGEDPDSLVRAEGREAF 360 Query: 359 EARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+E QA PL+ + F L + D T +G+A L+TLA PLI ++PG LR +RQ L Sbjct: 361 LARLEQQARPLADYFFRQLTEEADPGTLEGKAHLATLAAPLIEKIPGANLRALMRQRLAE 420 Query: 418 KLGI------------------------------LDDSQLERLMPKAAESGV-------- 439 G+ L + + A + G Sbjct: 421 ITGLTGTSPNSPAASPVPRVEDAHYYQADPGYADLIEPERSAFGRTAQDKGQWKGRSGYR 480 Query: 440 -------SRPVPQLKRTTMRI-LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNT 491 RP + + + L+Q+P+LA V + + P L L+ Sbjct: 481 KGRDDFAPRPRTAVSVEPPNLSALRTLLQHPQLAQKVADASHFASEEDPYAQLLVALLEA 540 Query: 492 CLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQ 551 P ++ QL+ + GT L L+ + + + EQ F D++N + E Sbjct: 541 LQKNPRSSSLQLIARWHGTEQGRLLRALAEKEWLISTDNLEQQFFDTINTLAARQRERGI 600 Query: 552 EELIARERTHGLSNEERLELWTLNQE 577 E+L+ + R LS EE++ L L Sbjct: 601 EQLLRKARQGELSAEEKIRLRDLLSR 626 >UniRef50_Q5QVK4 DNA primase n=2 Tax=Idiomarina RepID=Q5QVK4_IDILO Length = 581 Score = 609 bits (1570), Expect = e-173, Method: Composition-based stats. Identities = 278/583 (47%), Positives = 376/583 (64%), Gaps = 7/583 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIV+++D+RV LKK G+N ACCPFHNEKTPSFTV+ +KQFYH Sbjct: 1 MAGLIPKSFIHDLLERADIVEIVDSRVPLKKAGRNHQACCPFHNEKTPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLY--Q 118 CFGCG HGNAIDFLM +D L F + VEELA + +EVP E P ++ Q+Q + Sbjct: 61 CFGCGEHGNAIDFLMEFDGLNFPDAVEELAGIMGVEVPREQPENPQLAQKKQQQMQDDSE 120 Query: 119 LMDGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 LM F+Q L+ ++ YL+ RGLS E + RF IG+AP WD +L FG + Sbjct: 121 LMSKTARFFQHQLKHHENSNRVIDYLKGRGLSGETVKRFQIGYAPDAWDGLLSTFGSSAP 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 RQ L++ ++ N++GR YD FR+RVMFPI D+RGRV+GFGGR++ D PKYLNSPET Sbjct: 181 QRQQLLELKLINRNEKGRHYDFFRDRVMFPIHDRRGRVVGFGGRIIDGDGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG +LYG + QQ +P ++ +VEGYMDVVAL++ GI+YAVASLGT+TT++ +Q L Sbjct: 241 LFHKGSELYGYWHMQQAVRKPEQVCIVEGYMDVVALSEAGIHYAVASLGTATTSEQLQRL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR + ++CCYDGDRAGRDAAWRALE ALP + DG + F+FLP+GEDPD++VR+ G EA Sbjct: 301 FRTSGRIVCCYDGDRAGRDAAWRALENALPLLRDGLDMAFLFLPEGEDPDSVVREHGAEA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE +++A P + + F L +D+S+ GR++L +A PLI +V E R L Q L Sbjct: 361 FERELKKATPFTEYFFEHLQADIDVSSDAGRSQLLNIAKPLIEKVASEYYRDTLMQRLAE 420 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 KL + + SRP +K T +R I LL+Q P+LA VP E L E Sbjct: 421 KLRRETSQLERQFEKPQRQ---SRPKESVKMTPLRKAIALLLQYPQLAQSVPVREELREL 477 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ G+ L L C + +TT Q+LE +R T L+KL++W D++ EQ F D Sbjct: 478 QVSGIDLLIALHKQCAER-QMTTAQVLEGWRDTEYYQPLQKLALWQHQLDEDNVEQEFND 536 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 ++ D E R L+ +E+ L+ ER E TL Q L+K Sbjct: 537 IFIYLIDQYFEQRANALLKKEQEGALTRVERQEYQTLIQYLSK 579 >UniRef50_C5S6R1 DNA primase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S6R1_CHRVI Length = 582 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 254/577 (44%), Positives = 356/577 (61%), Gaps = 10/577 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+P FI+ LLARTDIV+LI +R++L+K G+ F A CPFH+EKTPSF+V+ +KQFYH Sbjct: 1 MAGRLPPEFIDQLLARTDIVELIGSRLQLRKAGREFQARCPFHDEKTPSFSVSPDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM YD L F E VEELA LE+P G LY+LM Sbjct: 61 CFGCGAHGNAIGFLMEYDHLPFREAVEELAERAGLEIP---NDGTPMQAAPDHGPLYRLM 117 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +Y++ L+ P A A YL++RGL+ E+ A F +G+AP + VL +FG + R Sbjct: 118 EDAALYYRRQLREHPEAQRAVAYLKERGLTGEIAAHFGLGYAPARGNPVLAQFGRDTATR 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L G++ G YD+FR+RV+FPIRD+RGRVIGFGGRVLG+ PKYLNSPET IF Sbjct: 178 TRLQTVGLVSE-QDGWPYDKFRDRVLFPIRDRRGRVIGFGGRVLGDGKPKYLNSPETPIF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGL+EAQQ N + L+VVEGY+DV+ALAQ GI AVA+LGT+TT +H+ L + Sbjct: 237 HKGRELYGLHEAQQANRTFDALIVVEGYLDVIALAQSGITNAVATLGTATTPEHLNQLLK 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ C+DGDRAGR AAW+ALETALP T + +RF+FL +G+DPDTLVR+EG E F Sbjct: 297 LAPDIVFCFDGDRAGRAAAWKALETALPLATGHQAIRFLFLSEGDDPDTLVRREGAEGFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + ++QA PLS FLF L +D +T DGRAR ++ P I ++P R L + L + Sbjct: 357 SGLKQAQPLSDFLFEHLSASMDTTTMDGRARFASQLQPYIDRLPAGFYRDLLIRRLADFT 416 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL-ENLDENK 478 G + + + +R + + + +I LL+ P+LA L ++ + Sbjct: 417 GAPAQALRPAVARR--RQPAARLAQPTRPSLVAQVIALLLDRPDLAPQALALNDDWRRST 474 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD--KNIAEQTFT 536 G+ + +L++ P L+ +LLE +R + L++LS+ + D A T Sbjct: 475 QRGIDVLIQLLDILRQSPDLSKARLLERWREHPHFGYLQRLSVDPFLRDMTPEGAGAELT 534 Query: 537 DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 ++ + D + E +L+ + + EER L Sbjct: 535 GAIRRLSDEVREHEWRQLLNKRSPSEWTPEERARLAR 571 >UniRef50_Q3JF10 DNA primase n=2 Tax=Nitrosococcus oceani RepID=Q3JF10_NITOC Length = 574 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 267/579 (46%), Positives = 363/579 (62%), Gaps = 10/579 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI++L+ARTDIV+LID+RV L+K N+ ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 3 MGERIPQEFIDELVARTDIVELIDSRVPLRKASHNYVACCPFHNEKTPSFTVSPQKQFYY 62 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC HG AI FLM +D+L F+E VEELA + VP S Q ++ Q LY+++ Sbjct: 63 CFGCSVHGTAIGFLMAFDRLSFIEAVEELAQRAGMMVPQ---SSKQQDYYNRHQGLYEVL 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L + YL +RGLS +IA F +GFAPP W+ +L P + Sbjct: 120 ACAAEFYQQQLEASAYQGQVKAYLRERGLSGPIIAEFGLGFAPPRWNALLHY--TRPSLK 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG+ ++ + R YDRFR+R++FPI D RGRVIGFGGR+LG+ +PKYLNSPET +F Sbjct: 178 SYLQAAGLTISKGEDRYYDRFRDRLIFPIHDYRGRVIGFGGRLLGDGSPKYLNSPETALF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLY+ ++ +RLLVVEGYMDV+ALA++ I YAVA+LGT+TT+DH+ LFR Sbjct: 238 HKGRELYGLYQVRKSLHRCDRLLVVEGYMDVLALAEHKIRYAVATLGTATTSDHLTRLFR 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T VI C+DGDRAG AAWRALETALP ++ GRQ++FMFLP GEDPDT+VR EG+ AFE Sbjct: 298 ITPAVIFCFDGDRAGYQAAWRALETALPLLSQGRQVQFMFLPQGEDPDTMVRAEGQTAFE 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 AR+ +A+PLS FL N+L +V+LS+ DG ARL LA PL++++P + L L Sbjct: 358 ARLAEAVPLSDFLLNNLRQKVNLSSVDGCARLVELARPLLARIPPGVYQDMLLARLAELA 417 Query: 420 GILDDSQLERLMPKAAESGVS-RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 I + + L P + V R + Q + R + +L+Q P++ V +L + Sbjct: 418 QIEQTTLIRHLSPGKKPTAVPLRRLEQGAASPTRRAVAILLQRPKMIQWVDKNLSLRGLE 477 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 G L ++LV+ + P L T LLE +R + LE+L+ W+ + + Sbjct: 478 GAGAELLQKLVDLLQNNPHLNTAALLERWRDSEMGRYLEQLAGWELLLTDEDMVLELQAA 537 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 L + E R L + L+ E+ EL L E Sbjct: 538 LERLQVQGAEQRIITLSNQ---PSLTGAEQRELLALLAE 573 >UniRef50_Q3BND8 DNA primase n=20 Tax=Xanthomonadaceae RepID=Q3BND8_XANC5 Length = 582 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 266/585 (45%), Positives = 374/585 (63%), Gaps = 11/585 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP FI++LLARTDIV+++ RV LK+QGK + A CPFH+E++ SFTV+ KQFYH Sbjct: 1 MA-RIPDAFIDELLARTDIVEVVGGRVPLKRQGKEYSARCPFHDERSASFTVSPTKQFYH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLMNYD+LEF++ V+ELA +++P E Q + R+ LY + Sbjct: 60 CFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMDIPRETQQRTPQQQDDSRE-LYSAL 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D F+Q+ L + AR YL+ RG+ + ARF IG+AP G+ + G + Sbjct: 119 DAATKFFQRQL--EGSERARDYLDGRGVDADNRARFQIGYAPDGYSALKDTLGTDARRMS 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG------NDTPKYLNSP 234 L AG+ ND+G YD+FR+RVMFPI D+RGRVI FGGR++G + PKYLNSP Sbjct: 177 VLERAGLFSKNDRGHVYDKFRDRVMFPIFDRRGRVIAFGGRIMGAPADGRDPGPKYLNSP 236 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +FHKGR+LYGL++ +Q N + RL+VVEGYMDVV+L Q+G+ AVA+LGT+TT +H Sbjct: 237 ETALFHKGRELYGLWQVRQANQKIERLIVVEGYMDVVSLFQFGVTQAVATLGTATTPEHA 296 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +LLFR +V C+DGD AGR A WRALE+ LP M DGRQ F+FLPDGEDPDT+VRKEG Sbjct: 297 ELLFRNAPDVYFCFDGDNAGRKAGWRALESVLPRMKDGRQAFFLFLPDGEDPDTIVRKEG 356 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +AF+ R++QA PLS F F+ + +++L T DG+ARL+ A PL++Q+P ++QE Sbjct: 357 AQAFDQRLKQATPLSQFFFDEMSREINLHTLDGKARLAERARPLLAQIPEGAFGDLMKQE 416 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 L G+ + ++ P+ P KR+ +R I +L+Q P LA + + + Sbjct: 417 LARLTGVGATASAQQSAPRLRLPARV-GAPTQKRSLVRASIAILLQRPSLAMSLEGVHDF 475 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 +LPG+ L EL++ +P ++TG LLEH+ A L+KL+ + D++ Sbjct: 476 SGLRLPGIDLLMELLDLVRQRPEISTGALLEHFAERQELAALQKLAAQELPGDEHSWTLE 535 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 D + + LL R EEL A++R GL + ++ E+ L + LA Sbjct: 536 LHDVVAQLDKQLLRQRVEELQAKQRAQGLDDTDKYEMRELLKALA 580 >UniRef50_Q602R8 DNA primase n=1 Tax=Methylococcus capsulatus RepID=Q602R8_METCA Length = 571 Score = 586 bits (1511), Expect = e-166, Method: Composition-based stats. Identities = 257/577 (44%), Positives = 358/577 (62%), Gaps = 12/577 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGR+PR FI+DL+AR DIVDLIDARV LKK G +F A CPFH+EKTPSF+V+ EKQFYH Sbjct: 1 MAGRLPREFIDDLIARIDIVDLIDARVPLKKSGSSFLARCPFHSEKTPSFSVSREKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAI FLM+Y+ F E +E LA + +++P + + Q +Y ++ Sbjct: 61 CFGCGAHGNAISFLMDYEHQSFPEALETLATLAGIDLPKAMATPGANPSASL-QPVYDIL 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY Q L+ P A A+ YL KRGL+ E+ R+ +G+APPGW+++ R Sbjct: 120 ERAAGFYIQQLRDHPDAGQAKIYLRKRGLTGEIARRYRLGYAPPGWNSL-----PADWPR 174 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 LI +G+++ + YDRFR R+MFPIRD+RGRVIGFGGR LG+DTPKYLNSPET++F Sbjct: 175 TLLIQSGLVIEKGR-SCYDRFRHRIMFPIRDRRGRVIGFGGRTLGDDTPKYLNSPETEVF 233 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG++LYGL+E + P R+LVVEGY+DV+ALAQ+GIN AVA+LGTST+A+H+ LLFR Sbjct: 234 RKGKELYGLHELLESTPRPRRILVVEGYLDVIALAQHGINDAVATLGTSTSAEHVHLLFR 293 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ C+DGD AG AAWRALE +LP + +GR++RF+ LP GEDPD+L+RKEG+EAFE Sbjct: 294 FTREIVFCFDGDAAGHKAAWRALEASLPLLQEGREIRFIHLPAGEDPDSLIRKEGREAFE 353 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +R+ QA P S +LF +L +DL + +GRA L A L+ ++P R + Q L Sbjct: 354 SRIGQASPFSDYLFRTLQKDLDLRSIEGRATLQKQARELLDRLPVGAFRTLMEQRLSEFT 413 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 G+ + + + + P + R ++ LL+ P LA L+ P + Sbjct: 414 GVAPPAPASKSLENRLGHPSGQVRP---PSAWRNVVTLLLHRPRLAKLISPEIRARLIEN 470 Query: 480 P-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 P L ++ + T G L EH R T L + + E+ F D+ Sbjct: 471 PRAGPLIARILEYTDLRDTPTAGMLFEHLRETPEGELARNLLKPGLLTPEEGMEREFVDA 530 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 L+ + L + R +LI + + L++ ER EL L Sbjct: 531 LDRVRALLRDERLSQLIEKSKAAQLTDSEREELRKLT 567 >UniRef50_UPI0001AEC827 DNA primase n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC827 Length = 592 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 288/591 (48%), Positives = 406/591 (68%), Gaps = 11/591 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IPR FI+DLL+RTD+V+++D+RVKLKK GKN+ ACCPFHNEK+PSFTV+ +KQFYH Sbjct: 1 MAGKIPRDFIDDLLSRTDVVEVVDSRVKLKKAGKNYQACCPFHNEKSPSFTVSQDKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTLYQ 118 CFGCGAHGNAI F+M +D+LEFVE +EELA H LEVP E GS P S+ ++ Q+Q Y Sbjct: 61 CFGCGAHGNAISFIMEFDRLEFVEAIEELARYHGLEVPREKGSRPAMSEEKKQQQQDDYA 120 Query: 119 LMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 +M+ + F+Q L+Q + A YL+ RGLS +++ ++ IG+AP WD +L FG + + Sbjct: 121 VMEQVARFFQHQLRQNGNSKKAIDYLKNRGLSGDIVKQWEIGYAPDSWDALLNTFGKDQQ 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + L+D ++ NDQGR+YD FR+R+MFPIRDKRGRV+GFGGRVL + PKYLNSPET Sbjct: 181 RIKQLVDLKLVNKNDQGRTYDFFRDRIMFPIRDKRGRVVGFGGRVLDDGGPKYLNSPETR 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IFHKG +L+G Y A+Q N + +++VEGYMDVVAL+Q+ IN A A+LGT+TT +HIQ+L Sbjct: 241 IFHKGSELFGFYSARQKNRSLDTVVIVEGYMDVVALSQFDINIATAALGTATTPEHIQML 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 RAT++++CCYDGDRAGR+AAWRALE ALP + DG ++ F+FLPDGEDPDT+VR+ GK+A Sbjct: 301 VRATSHIVCCYDGDRAGREAAWRALENALPALKDGVRISFLFLPDGEDPDTMVRQVGKDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F ++ AMPLS F F +L+ ++ TP+G+ L A+PLI G+ + L +EL Sbjct: 361 FMEMLDDAMPLSRFFFENLLKTHNVGTPEGKIALKKAAMPLIESTLGDDQKQMLLEELAK 420 Query: 418 KLGILDDSQLERLMPKAAE------SGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP- 470 G D +L++ + KA + S V + K + +R+LI LL+ PELATL Sbjct: 421 HTGEFDRFKLQQDITKANQGSKQAYSPNRNQVNKPKLSPLRMLIRLLLDKPELATLCEDV 480 Query: 471 -LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 ++ + G+ L R++ + C+S P T QL+E++R +++T+ KL + + + Sbjct: 481 QIDIFAGSNAAGMDLLRDVHSYCVSHPQAKTAQLVENFRDHPHSSTIAKLLLQEHLVKDE 540 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 AE+ + DS + D + R E LI+R R L+ E+ EL L +E K Sbjct: 541 DAERVYNDSFARLLDGHFDSRIETLISRSRVQPLTQAEKQELNLLMRERQK 591 >UniRef50_Q0A5N0 DNA primase n=4 Tax=Gammaproteobacteria RepID=Q0A5N0_ALHEH Length = 617 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 269/598 (44%), Positives = 365/598 (61%), Gaps = 26/598 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP FI++LL RTDI +++ ARV+LKK G N CPFH+EKTPSFTV KQFYH Sbjct: 1 MSGRIPDEFIDELLHRTDITEVVGARVRLKKTGANLLGLCPFHSEKTPSFTVAPAKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM+Y++++F E VE LA +E+P A + P + LY ++ Sbjct: 61 CFGCGAHGTAIRFLMDYERMDFREAVEYLARQAGMELPAAAAAAPVP---DRHARLYHVL 117 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ++L+ P + A YL++RGLS ++ ARFA+GFAPPGWDN+LKR + Sbjct: 118 AEAAIYYQEALRRHPASAKAVDYLKRRGLSGDIAARFALGFAPPGWDNLLKRHRDR---Q 174 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L++AG+L+ D GR YDRFR+RVMFPIR++RG V+GFGGRVLG+ PKYLNSPET +F Sbjct: 175 ADLVEAGLLIERDGGRVYDRFRDRVMFPIRNRRGTVVGFGGRVLGDGEPKYLNSPETPVF 234 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLYEA Q P LLVVEGYMDVVALAQ+G+ AVA+LGT+ T D + LFR Sbjct: 235 HKGRELYGLYEAVQAQRNPPLLLVVEGYMDVVALAQHGVQGAVATLGTAVTPDQVSRLFR 294 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 AT+ V+ C+DGDRAGR AAWRA+E +LP M +GR + + LP+GEDPD+LVR EG EAF Sbjct: 295 ATDRVVFCFDGDRAGRQAAWRAVENSLPAMREGRSVEILLLPEGEDPDSLVRAEGAEAFL 354 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R+E + PL+ + L + L D RARL A+PL+ ++P R + ++L Sbjct: 355 RRLERETRPLAEYSLEELADGLRLDAVDDRARLVQKAVPLVRRLPVGIYRDFYVEKLAEL 414 Query: 419 --LGILDDSQ-LERLMPKAAESGVSRPVPQ------------LKRTTMRILIGLLVQNPE 463 G+ Q +E+ A + RP ++RT +R + LL+Q P Sbjct: 415 AHTGVGRIEQAVEQGGEGARPTAPERPPAARRPAGGGRGAAMVRRTPVRQALTLLLQRPA 474 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 L PL+ L LPGL L R+++ P + T LL+ ++G A L +L+ W+ Sbjct: 475 LVAHAGPLDQL-HGDLPGLDLLRQILEIARDHPDVNTAGLLQRFQGHPQEAALWRLATWE 533 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 E FTD L + + + EL A + + +L TL Q + Sbjct: 534 --LPGGDLEGEFTDCLERIRQACSSRQTSELRAELDEERDFDAAKDKLRTLMQRRRLQ 589 >UniRef50_Q2Y7B9 DNA primase n=3 Tax=Betaproteobacteria RepID=Q2Y7B9_NITMU Length = 592 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 240/594 (40%), Positives = 344/594 (57%), Gaps = 24/594 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + FI +LL RTDIVD+I+ V L++ G N+ ACCPFH+EKTPSFTV+ KQFYHCFG Sbjct: 1 MISQSFIQELLDRTDIVDVIERDVPLRRAGANYSACCPFHSEKTPSFTVSPIKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ--------- 114 CGAHGNAI F+M YD + FVE V ELAA L+VP + S + + Sbjct: 61 CGAHGNAIGFVMEYDGMHFVEAVSELAARIGLQVPAQQAETGSGSQSDSARVKPNGTEYS 120 Query: 115 --TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L + M FY++ L+ ++ +A YL++RGL+ ARF IG+AP GW N+ F Sbjct: 121 PGALLEAMKIAARFYREQLK--LSKNAIDYLKQRGLTGATAARFGIGYAPAGWQNLHTSF 178 Query: 173 GGNPENRQ--SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKY 230 G P+N Q L+ AG++V D G+ YDRFR+R+MFPI + +G ++GFGGRVL PKY Sbjct: 179 PGQPDNAQKRLLVQAGLMVEGDGGKCYDRFRDRIMFPIVNLKGMIVGFGGRVLEKGEPKY 238 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 LNSPET +F KGR+LY L+ A++ E +++VVEGYMDVVAL+Q+GI YAVA+LGT+TT Sbjct: 239 LNSPETPLFQKGRELYNLFGARRAIREAGKVIVVEGYMDVVALSQHGIEYAVATLGTATT 298 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 HIQ L R T+N++ C+D D AG+ AAWRALE +L + DG+ + F+FLP+GEDPD+ + Sbjct: 299 PYHIQKLLRQTDNIVFCFDADSAGKKAAWRALEDSLAQLADGKSIGFLFLPEGEDPDSYI 358 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 R G+ AFE +EQ +PLS FLF L + DL + +GRA+L A PL+++V L + Sbjct: 359 RNHGRSAFEKLLEQTLPLSVFLFRELSARTDLKSSEGRAKLVQDAKPLLARVAAPGLALM 418 Query: 411 LRQELGNKLGILDDSQ--LERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLV 468 L + L G+ + + ++ A +P + L+ +L+ +P + Sbjct: 419 LVKRLAEISGLSERELEGILKIRRVTAFPVREKPSRPKPVSPYEWLLQILLYHPAYIQKL 478 Query: 469 P-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLE----HYRGTNNAATLEKLSMWD 523 L D+ + LV P + G L+ H+R + A LE+ + Sbjct: 479 DRELLAYDQEYEKEVAALAALVEFIDVHPHMGEGTLIPLMTVHFRASPYRAILEQAASKT 538 Query: 524 DIADKN-IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 D E F ++ + + + R L + + L+ EER EL + Sbjct: 539 LGWDGELDLEAEFAGAMARLHEMKRKQRMAVLHNKSLS-ALTPEEREELQRMAM 591 >UniRef50_Q0AJ88 DNA primase n=3 Tax=Nitrosomonas RepID=Q0AJ88_NITEC Length = 597 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 237/598 (39%), Positives = 333/598 (55%), Gaps = 29/598 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + FI +LL R DIVD++ +KLKK G NF ACCPFHNEKTPSFTVN KQFYHCFG Sbjct: 1 MIAQPFIQELLDRIDIVDIVARHLKLKKAGANFTACCPFHNEKTPSFTVNSSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ----------- 112 CG HGNAI+FLM + + FVE VE LAA +++P + + Sbjct: 61 CGRHGNAINFLMEHSGVSFVEAVESLAAHAGMQIPAWKNINSKASDSGETSLNEVRFDEV 120 Query: 113 ---RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL 169 LY M+ FY+ L+ + A YL+ RG+S + F IG+AP GW N+ Sbjct: 121 IQTSSDLYGRMEQAAKFYRVQLK--QSELAIAYLKDRGVSGQTALHFGIGYAPSGWQNLA 178 Query: 170 KRFGG--NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT 227 + F + ++ +L+ +G++V ++ ++YDRFR R+MFPI D + R+IGFGGR L Sbjct: 179 EIFTDYPSGDSSHALVRSGLIVAHESKKNYDRFRHRIMFPILDLKKRIIGFGGRALDGSE 238 Query: 228 PKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGT 287 PKYLNSPET +F KGR+LY L A + R++VVEGYMDVV L Q+GI VA+LGT Sbjct: 239 PKYLNSPETPLFIKGRELYNLVSAGPAIRKSGRVVVVEGYMDVVMLVQHGIENVVATLGT 298 Query: 288 STTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPD 347 +TT+ HIQ L R T+ V+ C+DGD AG AAWRALET+LP + DG+ ++F+FLPD EDPD Sbjct: 299 ATTSTHIQKLLRYTDEVVFCFDGDEAGTKAAWRALETSLPQLKDGKDIKFLFLPDKEDPD 358 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 + +RK GK+AF+ +E+A LS F L +V+LST +GRARL A PL+ Q+ Sbjct: 359 SYIRKYGKDAFKNLLEKAQLLSVFFCKELSSRVNLSTSEGRARLVQQAEPLLVQINAPIF 418 Query: 408 RIYLRQELGNKLGILDDSQLERLMPKAAESG---VSRPVPQLKRTTMRILIGLLVQNPEL 464 L + + G+ + + L P S L T R LI +L+ P Sbjct: 419 GFMLMKRISELAGVDQNQLIAFLKPGKKNQPSISRSNVSRPLSVTPYRRLIQILLHTPAY 478 Query: 465 ATLVP-PLENLDENKLPGLGLFRELVNTCL-----SQPGLTTGQLLEHYRGTNNAATLEK 518 + L L++ + L LV+ S L + ++ H T + LEK Sbjct: 479 VDKLDTDLFALNDGQNEEKALLAALVDFLKTSSCTSMDELNSVAIMLHLDQTPHRVLLEK 538 Query: 519 LSMWDDIADKN-IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 ++ + D + + FT ++ + ++ + R EL R L+ EE+ EL L Sbjct: 539 IARDIHVKDVDWDIDAEFTGAMVRLREAQRKSRVAELHNRPLAS-LTPEEKKELRRLI 595 >UniRef50_A3QBM0 DNA primase n=6 Tax=Gammaproteobacteria RepID=A3QBM0_SHELP Length = 601 Score = 575 bits (1482), Expect = e-162, Method: Composition-based stats. Identities = 289/585 (49%), Positives = 384/585 (65%), Gaps = 15/585 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IPR FIN+L+ARTDIVDLIDA+V LKK GKN ACCPFH+EK+PSFTV+ +KQFYH Sbjct: 27 MA--IPREFINELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYH 84 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHGNAIDF+M YD+L+FV+ +EELA LEVP E G+G + E R LYQLM Sbjct: 85 CFGCGAHGNAIDFVMEYDRLDFVDAIEELAGRLGLEVPREQGTGKRRDEGLSRD-LYQLM 143 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + ++Q L+ YL RGLS EVI F IGFAP GWD +L R+ N + + Sbjct: 144 EEASRYFQSQLKQHTDKQKVLDYLAHRGLSDEVIEHFNIGFAPDGWDGLLGRYRQNQDAQ 203 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L+ AGM++ ND G+ YDRFR+R+MFPIRD+RGRVIGFGGRVLG+ TPKYLNSPET IF Sbjct: 204 DKLLTAGMVIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIF 263 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG +LYGLYE +Q + +P+++L+VEGYMDVVAL Q+G++YAVASLGTSTTAD QLL R Sbjct: 264 HKGYELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTTADQFQLLLR 323 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + VICCYDGD+AG +AAWRALETALP + G Q++FMFLP GEDPD+LVR+ GK AFE Sbjct: 324 SAKEVICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLVRQIGKPAFE 383 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A L FLF++L + + L+ A+ LI +V L+ L + L KL Sbjct: 384 QLIAEAKLLPEFLFDTLASRYGTD----KGTLAKQAMSLIEKVQDTVLQSLLLENLAYKL 439 Query: 420 GILDDSQLER---LMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE 476 G+ +L+R A + + + T +R+ I LLVQ+P L +P L Sbjct: 440 GMNSAEELQRKLGFKRIDANKPLQNKALKGRGTPLRLAIALLVQHPHLGNNLPVQPALKH 499 Query: 477 NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFT 536 K+ G+ L L++ ++ + + QLLE +RG + TL+KL+ W+ +Q F Sbjct: 500 IKMAGIDLLSLLLDRTRAE-KVNSAQLLEQFRGDDQLDTLKKLAQWEHQVADENLQQEFK 558 Query: 537 DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 +L + + +E R +EL + EER++L L + + Sbjct: 559 KALIWLNNQYIEQRYQEL---SLKQHHTKEERMQLKKLIAVIQGQ 600 >UniRef50_C7R7Q2 DNA primase n=2 Tax=Gammaproteobacteria RepID=C7R7Q2_KANKD Length = 592 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 270/589 (45%), Positives = 356/589 (60%), Gaps = 17/589 (2%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ FI++LLAR DIVDLID+RV LKK G N+ ACCPFH EKTPSFTV+ +KQFYHCF Sbjct: 2 GLIPQHFIHELLARVDIVDLIDSRVPLKKTGANYKACCPFHGEKTPSFTVSQDKQFYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG HGNAI FLM YD+LEF + VEELAAM +EVP E +LY LM+ Sbjct: 62 GCGLHGNAIGFLMEYDRLEFPDAVEELAAMMGMEVPREETVSNKPKVDT---SLYDLMEK 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF---GGNPENR 179 + +YQ+ L+ +A YL+ RGLS E+ +FAIG+ P W N+ F + + + Sbjct: 119 VANYYQKQLKN--NKAAIDYLKSRGLSGEIAKQFAIGYVPGEWRNLETVFPKLQQDKKLQ 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 Q L+D GML+ D+ YDRFR+R+MFPI+DKRGRVI FGGRV+G PKYLNSPET IF Sbjct: 177 QQLVDCGMLIRKDK-SLYDRFRDRIMFPIKDKRGRVIAFGGRVMGQGEPKYLNSPETPIF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK +LYGLY+A+Q N + +RLL+VEGYMDVVALAQ+ INYAVA+LGT+TT+ H+Q LFR Sbjct: 236 HKSNELYGLYQARQANRKLSRLLIVEGYMDVVALAQFDINYAVATLGTATTSSHLQQLFR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 A ++ C+DGDRAGRDAA RALE L M +GR++R MFLPDGEDPD++VRK GKE FE Sbjct: 296 AARELVLCFDGDRAGRDAALRALEHGLSQMREGREIRLMFLPDGEDPDSMVRKVGKEQFE 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A PL F+ L QVDL + GR +L LA P + ++ + L K Sbjct: 356 QMIGEATPLFEFILEHLSSQVDLGSVSGRGQLVHLAKPYLDKITDPIYHEFFSSALAEKA 415 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTM-----RILIGLLVQNPELATLVPPLENL 474 + + + +P ++ ++ I LL+Q P LA + L Sbjct: 416 NLSESKLAAIIEAPTQPQHPRKPEKSTPQSPKANKTLQLAITLLLQQPSLALAINNYGWL 475 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRG-TNNAATLEKLSMWDDIADKNIAE- 532 G L +L+ P + T LLEH+R T L L+M + E Sbjct: 476 QTLPDKGSKLLHQLLEIIHKTPKINTSMLLEHWRDNTKLYDRLASLAMSEREERIQGNEQ 535 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 Q D +N + ++R + L + GL+N+E+ E L LAK+ Sbjct: 536 QELQDCINRLLLHARKIRVDYLQHKAAEQGLTNQEKSEYRQLL-LLAKQ 583 >UniRef50_A0Y846 DNA primase n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y846_9GAMM Length = 611 Score = 573 bits (1478), Expect = e-162, Method: Composition-based stats. Identities = 260/599 (43%), Positives = 362/599 (60%), Gaps = 34/599 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRIP+ FI+DLL R DIV++ID RV LKK G+NF ACCPFH EKTPSF+VN EKQFY+ Sbjct: 1 MSGRIPQSFIDDLLDRLDIVEVIDRRVGLKKSGRNFTACCPFHEEKTPSFSVNQEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M+Y++++F +E LA LEVP EA + Q ++ + +Y ++ Sbjct: 61 CFGCGAGGNAIGFIMDYERMDFPRAIEVLADTAGLEVPREASAFQEQPQQKKN--IYTIL 118 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +YQQ L+ P A YL+ RGLS E+ F +G+APPGWDN+L G + E+R Sbjct: 119 EKAAVYYQQQLKEHPQKQRAVDYLKARGLSGEIARDFDMGYAPPGWDNLLNHLGQSDEDR 178 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q LID GML+ ++ + YDRFR+R++FPIRD RGRVI FGGRVLG+D PKYLNSPET + Sbjct: 179 QLLIDGGMLIEKEEENKLYDRFRDRIIFPIRDNRGRVIAFGGRVLGDDKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK ++LYGLY++++ N + RLLVVEGYMDVVALAQ+GIN++ A+LGT+T+ DH+ +F Sbjct: 239 FHKSKELYGLYQSRKANRQLQRLLVVEGYMDVVALAQHGINWSAATLGTATSTDHLNRVF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C+DGD AGR AA RAL++ALP M DGR+ RF+FLP GEDPD++VR G F Sbjct: 299 RQCPEVIFCFDGDEAGRKAAVRALDSALPAMEDGRRARFLFLPQGEDPDSMVRAIGASNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +E+A PL +LFN+ +DL + DGRAR+STLA PLI ++PG + + L ++ Sbjct: 359 IRLVEKAEPLEEYLFNAQADGLDLGSLDGRARMSTLAAPLIDKLPGGVFKELMMSSLADR 418 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMR-------------------------- 452 G+ + E L + P P + R Sbjct: 419 TGLSLEKLSEILQRHKRNKQATEPQPASPQLPDRAPLNTPASPKRRDKGLVKSETMRDPI 478 Query: 453 -ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 I LL+ +P+ A+ V L ++ L ++ +P T+ L+ H+ G + Sbjct: 479 LYAIALLLHDPKAASHVTIPATLLQSDDGNAPLLIAMLELLHKRPDSTSAMLIGHWYGES 538 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG---LSNEE 567 TL++L + E D+L H+ + + + LS+EE Sbjct: 539 WGETLQQLLHAEQFIPSTDIELELIDTLQHLDRRHQHQDLGHQLDKILSKDYASLSDEE 597 >UniRef50_C3K340 DNA primase n=2 Tax=Pseudomonas RepID=C3K340_PSEFS Length = 656 Score = 569 bits (1467), Expect = e-161, Method: Composition-based stats. Identities = 257/647 (39%), Positives = 372/647 (57%), Gaps = 69/647 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL RTDIVD++ +RV+LKK GKN+ ACCPFH EKTPSF+V+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ FLM++D L+F + +E+LA +E+P E P + + LY L+ Sbjct: 61 CFGCGAGGNALGFLMDHDNLDFPQAIEDLAKAAGMEIPREESGRPHKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY+Q+L+ P +A YL+ RGL+ E+ F +GFAPPGWDN+ K + + Sbjct: 121 TAAADFYRQALKSHPQRKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 +++IDAG+LV N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KAMIDAGLLVENAETGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGL+EA+++N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR+AAWRALE L + DGR+ RF+FLP+GEDPDTLVR EG +AF Sbjct: 301 RVVPSVLFCFDGDQAGRNAAWRALEATLSSLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360 Query: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+ Q A PL+ + F L + D + +G+A ++TLA PLI +VPG LR +RQ L Sbjct: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLLE 420 Query: 418 KLGILDDSQLERLMPKAAESGVSRPV---------------PQLKRTTMRILIGLLVQNP 462 G+ ++ + ++ + PQ T + + P Sbjct: 421 ITGLSGEAVSQLAHSAPQDAPPAYDPGMDYDAMPDYSDFHQPQEAYTPQQ---AWAPKKP 477 Query: 463 ----------------------ELATLVPPLENLDENKLPGLGLFR--ELVNTCLSQPGL 498 E P+ + L +L S Sbjct: 478 GAGGKKWDKKPWSKNGKRGDNDEAYAPRTPVAVEAPTLIALRTLIHHPQLAEKVESADHF 537 Query: 499 TTG---------QLLEHYRGTNNAATLEKLSMW---------------DDIADKNIAEQT 534 L+E + +++ ++ W + + D + EQ Sbjct: 538 ANASNTYAQVLIALIEAVQKNPKLNSIQLMARWHGTEQGRLLKALAEKEWLIDGDNLEQQ 597 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 F D++ + +ELI R R LS EE++++ ++L K+ Sbjct: 598 FLDTITRLSAGQHTQTLDELIKRARQPDLSAEEKIQIAKQMRDLLKQ 644 >UniRef50_B9M0M5 DNA primase n=7 Tax=Geobacter RepID=B9M0M5_GEOSF Length = 589 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 183/584 (31%), Positives = 283/584 (48%), Gaps = 12/584 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ IP IN++ R I++++ V L+K G N+ CPFH EKT SF VN + +H Sbjct: 1 MS-MIPDDKINEVRERASILEIVSDYVSLRKSGANYQGICPFHGEKTGSFNVNPARGIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GNAI F+M + L F E V+ LA + + + + + +R+ LY++ Sbjct: 60 CFGCGVGGNAISFIMKIEGLSFPEAVKFLAKRVGVTIEERPRTATEKRQSDERELLYKIN 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY+Q L P + RQYLE+RG+ + IG+AP WD++ + Sbjct: 120 GQAAAFYRQLLLNDPAGEAGRQYLERRGVDSATSEAYGIGYAPDKWDSLTRHLEQLRVPL 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 G++ + GR YD FR R++F I D GR IGFGGRVL + PKY+NSPE+ I+ Sbjct: 180 DLAEKLGLIKRREGGRHYDAFRNRLLFVIADMHGRPIGFGGRVLDDSLPKYINSPESPIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK L+GL ++ E ++VEGY D +AL Q GI VA+ GT+ T HI+LL R Sbjct: 240 HKSEVLFGLNLSKYAMREKGNGIIVEGYFDHLALYQAGIRNVVATCGTALTTGHIKLLQR 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 N V +DGD AGR A R++E L + + LP G+DPDT ++ +G AF Sbjct: 300 YANKVYTLFDGDSAGRKATLRSMELFLD---EKLPASVIELPPGDDPDTFLKTQGDGAFA 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A P+ F F+ L+ Q D T +G+ P + ++ R +E+ KL Sbjct: 357 GHLAKAKPIFEFFFSELLGQYDSGTVEGKVGTIEALTPHLMKIVNPIERDLYIKEISRKL 416 Query: 420 GILDDSQLERLMPKAAES-----GVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 G+ +++ S R P+ + LI L+ + + V Sbjct: 417 GVDPRQMQKKIGRSPVSSADLAVPRERVKPRSNKGPEETLISLMGKYAGVIKRVRDYGAA 476 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 + L + ++ S+ G+ LLE T + L + M DD D+ A + Sbjct: 477 NLFSADLLPIAEAIMAHNDSEAGIDWALLLEQIDSTEERSRLAGIFMDDDHLDEIDANKA 536 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 F S+L+ + + +E + S+ ER W + ++L Sbjct: 537 FDQCRMSRDRSMLKDGDVKELKKELSRLDSDSER--YWEILRKL 578 >UniRef50_B9ZRS5 DNA primase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZRS5_9GAMM Length = 594 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 226/600 (37%), Positives = 328/600 (54%), Gaps = 30/600 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI++LL R+DIV++I RV LKK G+ F ACCPFH EKTPSF V+ +KQFYH Sbjct: 1 MAGLIPQAFIDELLERSDIVEVIQRRVSLKKAGREFAACCPFHGEKTPSFYVSPQKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG AI FLM Y+ L F E VE+LA LEVP EAG + LY+ + Sbjct: 61 CFGCGAHGTAISFLMEYENLSFPEAVEQLAEQAGLEVPREAGGDDKREAH---APLYEAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +Y Q L+Q A +YL+ RG+ + IG+APP +++ + Q Sbjct: 118 NAAAEYYVQQLRQT--PKAVEYLKNRGIDGNTARDYQIGWAPPS--GLIEALQPR-FSPQ 172 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+DAG+ D G +RFR R+MFPIRD+RGR+ GFGGR++ + PKYLNSPE+++FH Sbjct: 173 QLVDAGLAARRDDGGIRERFRARIMFPIRDRRGRITGFGGRLIEDGEPKYLNSPESEVFH 232 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ +YGL+EA++ + ++VVEGYMDVV LA+ G AVA +GT+ T H+ LFR Sbjct: 233 KGQTIYGLFEARKAGTRLDDIVVVEGYMDVVGLARAGFRRAVACMGTALTRAHLDSLFRQ 292 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + + C+DGD AGR AAWR+L ALP + R++R +FLP+G+DPD+LV ++G +E Sbjct: 293 VSRITLCFDGDAAGRRAAWRSLAEALPAIQGLREVRVLFLPEGDDPDSLVLRDGLAGWEG 352 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+ A+PLS L L + T +GR R + A+ L++ R L + + + Sbjct: 353 RLAAALPLSETLVRLLREEHPTDTAEGRTRFAHAAMKLVATTRDPLFRDQLVERVAQETH 412 Query: 421 ILDDSQLERLM----------------PKAAESGVSRPVPQLKRTTMRI---LIGLLVQN 461 + + E+L E+ + P + T + L+ ++Q+ Sbjct: 413 LSPERLGEQLREAEDGNVRATGPASGPSDIPEAPSAEPAGAARETPSALWGALLARILQH 472 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 PEL L +L +L+ +PG ++ LLE +R + L+ L+ Sbjct: 473 PELEWSQSELADLTAFPGTAAQTLGKLLEALQERPGCSSAHLLERFRDDRHFNRLQALAA 532 Query: 522 WDD-IADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + D + +Q D + R EL GL+ E+R EL L L K Sbjct: 533 RELGDGDPKVTQQVAMDCARQLLLQQARTRIRELTR--ADGGLATEQREELARLTALLQK 590 >UniRef50_P71481 DNA primase n=7 Tax=Legionella RepID=PRIM_LEGPN Length = 576 Score = 563 bits (1450), Expect = e-159, Method: Composition-based stats. Identities = 238/582 (40%), Positives = 340/582 (58%), Gaps = 12/582 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ FI+DLL RTD+V+LID V LKK+G + ACCPFHNEKTPSF V +KQFYH Sbjct: 1 MSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+MNY F + VE L ++ P + + + LY LM Sbjct: 61 CFGCGASGNAISFVMNYLNQGFTDAVETL-RRAWVKCPRDGTGEKHKSSLN----LYNLM 115 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ +YQ+ L+ A YL RGLS E+ R+ +G+AP GW N+ K F N++ Sbjct: 116 SEVSQYYQKKLKYN-GQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPN---NQR 171 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIF 239 L+ GML+ +D+G+ YDR+R R+MFPI D+ GRVIGFGGRVL D PKYLNSPET +F Sbjct: 172 ELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLF 231 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R+LYGL++ P+ ++VVEGYMDV+ALAQ+GI VA+LGT+T+ HIQLL + Sbjct: 232 QKSRELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAK 291 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++I C+DGD AG+ AAWRALE++LP++ G F+FLP+ DPD+LVR EGK F Sbjct: 292 HTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFL 351 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++QA PL F F++L ++LS P G+ +L P + ++ + + L +L Sbjct: 352 ELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLT 411 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 I + K+ + + R+ +RI I LL+QNPE+ ++ N Sbjct: 412 HIESHRLTNLITDKSESKPEVQ--AAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHE 469 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 + +L+ +P T L+E +R ++ + KL+ WD + + F D L Sbjct: 470 QEHHILLKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVL 529 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + E+ + I + R GL+ ERL L L +E + Sbjct: 530 LFLQKQNREILIRQYIEKSRKTGLTEAERLSLQNLLKERHGQ 571 >UniRef50_A8PNJ9 DNA primase n=1 Tax=Rickettsiella grylli RepID=A8PNJ9_9COXI Length = 585 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 249/581 (42%), Positives = 358/581 (61%), Gaps = 18/581 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FIN+LLAR DIV LIDARV L+K+GKN+ ACCPFH+EKTPSFTV EKQFY+CFGC Sbjct: 6 IPQEFINELLARVDIVQLIDARVPLRKKGKNYIACCPFHSEKTPSFTVTPEKQFYYCFGC 65 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GNA +FLM+Y+KL F+E V LA +E+P + Q LY L++ + Sbjct: 66 AISGNAFNFLMDYEKLSFLEAVSILAESLGMEIP---HAAKQQEVYKDSANLYTLLEEVA 122 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY ++ + R YL++R LS E++ +F +G+AP GWD +LK F + L+ Sbjct: 123 QFYAN--ERQQNKTVRYYLKQRNLSDEIMTQFRLGYAPLGWDTLLKAFKKE---TERLLT 177 Query: 185 AGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L+ +G YDRFR+RV+FPIRD++GRVIGFGGR + PKYLNSPET +FHKG+ Sbjct: 178 VGLLIKKSKGQGYYDRFRDRVLFPIRDRKGRVIGFGGRTVTQGEPKYLNSPETLLFHKGK 237 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGLYE Q N R+LVVEGYMDV+AL Q G +AVA+LGT+ + D + L T Sbjct: 238 ELYGLYEVFQHNRHVERILVVEGYMDVLALFQAGFPFAVATLGTAMSRDQLSRLMSHTQE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 +I C+DGD AG+ AAWR LE +L +TDG RF+ LP GEDPD+ ++K+G + F ME Sbjct: 298 IIFCFDGDSAGKKAAWRVLEQSLALLTDGYIFRFLCLPHGEDPDSFIQKKGADEFMTFME 357 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA L+ FLF+ L+ QVD++ +G+ARL+ LA+PLI +V ++ L ++L + I Sbjct: 358 QAQSLTEFLFSGLLAQVDITQLEGKARLAKLAVPLIEKVTQGIMQYKLFEQLARLVNIDV 417 Query: 424 DSQLE-----RLMPKAAESGVSRPVPQLKR-TTMRILIGLLVQNPELATLVPPL--ENLD 475 + + P PV ++ R + MR+ I LL+Q P +A + + L+ Sbjct: 418 MTLKKITTHTTNHPLKTMQKKINPVSKVNRFSPMRLAIALLIQFPHIAQSLSDKQCQILN 477 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN-NAATLEKLSMWDDIADKNIAEQT 534 KLPG L +L + QP LT+ LLE++R + L++L + K+ + Sbjct: 478 TLKLPGSDLLVQLFSVIKQQPELTSAMLLEYWRDDEVHYKILKQLMGYSITIPKSGVQAE 537 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 F D L + S++E + + L+ + + GL+ +E+ +L+ L Sbjct: 538 FDDLLKFLKKSVIENQIDNLLQQGKQTGLNVQEKKQLYHLM 578 >UniRef50_C0GBZ6 DNA primase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GBZ6_9FIRM Length = 604 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 185/591 (31%), Positives = 290/591 (49%), Gaps = 23/591 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP F++++ R D+V+LI V+LK+ G+N+ CPFH EKTPSF+V+ +KQ +H Sbjct: 1 MEGNIPNEFVDEVRTRFDVVELISEYVQLKRSGRNYFGLCPFHGEKTPSFSVSQDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + + F E V+ELA +++P S +Q ++ L + M Sbjct: 61 CFGCGEGGNVFSFLMKMEGIPFPEAVKELARRAGMQLPSTVSSVAAQRAEQKKSRLREAM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +Y+ LQ A YLEKRGL+ E+I F +GFAP W+ V + + Sbjct: 121 AWADKYYRYWLQHQDGAKALHYLEKRGLTREIIESFGLGFAPNRWEAVKQFLRKKDFTER 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+DAG+L N + ++YDRFR R+ FPI RG I FGGR+L + PKYLNSPET +F Sbjct: 181 ELLDAGLLSDNPK-KTYDRFRNRITFPICSPRGETIAFGGRILDDGEPKYLNSPETPLFD 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LY ++ A++ + ++ EGYMDV+A Q G+ AVASLGTS T +LL Sbjct: 240 KGKNLYAIHLAREAIRREKQAIIFEGYMDVIAAHQAGVTNAVASLGTSLTEAQARLLRSQ 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V+ YD D AG+ A WR L+ + G ++ LP G DPD +R+ G +AF Sbjct: 300 AEEVVIVYDADAAGQAATWRGLQIL---KSAGCLVKVGRLPAGMDPDDYIRRHGGDAFRK 356 Query: 361 -RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A+ L + SL Q L + R RL +++ V R + L Sbjct: 357 DIIGEALLLVDYQMASLAQQYSLDKDEDRIRLFNKISEILASVDNAMEREDYVTKAAAML 416 Query: 420 GILDDSQLERLMPKA----AESGVSRPVPQLKRTTMR---------ILIGLLVQNPELAT 466 + + E L K +R +K + R +I L + P L Sbjct: 417 KLPATAVREELNKKKQSASRPHSQTRKSSTIKPSLQRETAAQKAPMQIIALWGRFPSLIE 476 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 ++ L + + + +LL+ + + TL +L + ++ Sbjct: 477 ESAGQLEEEDFP---AELIPAFLEAQKEKASFSAARLLDSLQEEKHRQTLSRLLIHEE-Y 532 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 D+ IA++ D + + + RQ + + + + E+ L+++ Sbjct: 533 DEKIAKKAIDDCI-RLLKCVRIARQRKELEAQMASLDPVAAKGEINELSKK 582 >UniRef50_A1HPB4 DNA primase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPB4_9FIRM Length = 606 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 191/604 (31%), Positives = 293/604 (48%), Gaps = 38/604 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F++ + + DIV +I V LKK+G+N+ CCPFH+EKTPSF+V EK F++CFGC Sbjct: 7 DDFVDRVRSECDIVSVISDYVPLKKKGRNYWGCCPFHHEKTPSFSVTPEKGFFYCFGCQT 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 GN +FLM + + F E V++LAA N+ +P S + +LY + + F Sbjct: 67 GGNVFNFLMKIENISFFEAVKKLAARLNIPLPEREKSPAEIARERELASLYLANEYASEF 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L + + AR+YL RG+S ++I F +GFAPP WD +++ + + L+ A Sbjct: 127 FHACLTKTNMGRVAREYLASRGISDDIIRNFKLGFAPPAWDKLVQALTRRGLSEELLLKA 186 Query: 186 GMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+++T +G YDRFR RVMFPIRD RGRV+GFGGRVL + +PKYLNSP+T +F+K Sbjct: 187 GLVLTRPRGDGIYDRFRNRVMFPIRDARGRVVGFGGRVLDDSSPKYLNSPDTLLFNKRHL 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA-TNN 303 LYGL A + E +++VVEGYMDV+ ++G VASLGT+ T + LL R + Sbjct: 247 LYGLDAAIRSIKESGQVIVVEGYMDVITAHRFGFTNVVASLGTAFTPEQAGLLERCSVSQ 306 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ YD D AG+ A +RA G ++ + +P+G+DPD +R+ G EAF + Sbjct: 307 VLFAYDSDAAGQSATFRA---LATVRERGFNVKVVSIPEGKDPDEFLRRHGPEAFARVVA 363 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QAMP + + +D ST +G+ + + LP+++ V L KL I + Sbjct: 364 QAMPFVDYQLQQALESIDYSTLEGKVAVVSKILPVLASVGNAVEVNGHIARLAQKLNIDE 423 Query: 424 DSQLERLMPKAAESGVSRPVPQLKR-------------------TTMRILIGLLVQNPEL 464 + + + V + R LI L+ + + Sbjct: 424 SAIRTEYAKYIHQYKKDKIVNKGNNINSHHNFVKFAKGPEAATVAAERQLIRLMCDDGAV 483 Query: 465 ATLVP-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 V L D + + R + + L L T NA + + + Sbjct: 484 IPYVQVQLAVEDFSDSARQEIVRRIFMVNDAGEKLEPAALAMGLSETANAELSHIMLIDE 543 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS-------NEERLELWTLNQ 576 AD + D L + + L+ E+ R + L EE E +N Sbjct: 544 QCAD---VTKVVDDCLKTIRLARLKALYEQH--RLKADELERMGDSRFQEELAESKRIND 598 Query: 577 ELAK 580 E+ K Sbjct: 599 EIKK 602 >UniRef50_Q1YRW9 DNA primase n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRW9_9GAMM Length = 665 Score = 559 bits (1441), Expect = e-157, Method: Composition-based stats. Identities = 255/648 (39%), Positives = 368/648 (56%), Gaps = 72/648 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP+ FI+DLL R DIVD+++ RV LKK GKN+ ACCPFH+EK+PSFTV +KQFY+ Sbjct: 1 MAGRIPQTFIDDLLDRVDIVDVVNGRVPLKKAGKNYKACCPFHDEKSPSFTVAQDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M +D+L+F+ VE LA LE+P EA P Q+ LY ++ Sbjct: 61 CFGCGAGGNALGFVMEFDRLDFLPAVEMLARNAGLEIPREAAQDP--KISKQKDNLYSIL 118 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + +++Q L+ + A YL+ RGLS +V A++ +G+APPGWDN+LK G + + Sbjct: 119 TESDRYFRQQLRTHAGAASAVDYLKARGLSGQVAAQYGMGYAPPGWDNLLKAVGTDEQRT 178 Query: 180 QSLIDAG-MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L ++G +++ ++ + YD FR R+ FPIRD+RGR +GFGGRVL + PKYLNSPET + Sbjct: 179 ALLNESGMLVIKPEEKKQYDFFRHRITFPIRDQRGRTVGFGGRVLDDSKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR+LYGLYEA+Q E L++VEGYMDV+ALAQ+ IN AVA+LGT+ T H+Q +F Sbjct: 239 FSKGRELYGLYEARQKLKEIPCLIMVEGYMDVIALAQFEINNAVATLGTALTESHLQKIF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ ++ C+DGD AGR AA RAL+TALP M DG +F+FLPDGEDPDT+VR+ GK+ F Sbjct: 299 RYTSEIVFCFDGDSAGRKAAARALDTALPEMRDGVSAKFLFLPDGEDPDTMVRQLGKQEF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++++A PLS FLF L +D ST DG+ARLS + P I+++P R + +EL ++ Sbjct: 359 NEQIDRAQPLSEFLFEQLSDGIDSSTADGKARLSKVCAPQINRIPQGVFRQLMLEELSSR 418 Query: 419 LGILDDSQLERLMPKAAESGVS-----------RPVPQLKRTT----------------- 450 GI ++ + + +G +P P+L Sbjct: 419 TGISAENLRDYVATHKPPAGRGNASQQTHQPAHQPAPRLASQPTAHTSNQAPTDEFYSGP 478 Query: 451 --------------------MRILIGL---------LVQNPELATLVPPLENLDENKLPG 481 R I L LV +P+LA V +E L + P Sbjct: 479 PPDDIYGDGDYEPYPETVAVRRSKIRLSPIKVLSALLVNHPQLAEYVEDIEMLSVSADPD 538 Query: 482 LGLFRELVNTCLSQPGLT-TGQLLEHYR----GTNNAATLEKLSMWDDIADKN----IAE 532 + LF +++ S P + T + ++ L+ L+ + Sbjct: 539 MALFLKILALINSDPTCSKTSHIFARWQATYSDQTELQLLKTLAGSELHQPPKGTGRDDN 598 Query: 533 QTFTDSLNHMFDSLLELR--QEELIARERTHGLSNEERLELWTLNQEL 578 Q F DSLNH+ E + + L+ + +LW ++ +L Sbjct: 599 QEFVDSLNHVIRDAFESLPPERKADFLLAAETLNERQIKQLWKIHMQL 646 >UniRef50_Q1QYX6 DNA primase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QYX6_CHRSD Length = 613 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 262/607 (43%), Positives = 353/607 (58%), Gaps = 28/607 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP+ FI+DLLARTD+V+++ RV+LKK G+N+ CPFH EK+PSFTV+ EKQFYH Sbjct: 1 MAGQIPQRFIDDLLARTDVVEIVGERVQLKKAGRNYSGLCPFHQEKSPSFTVSAEKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGCG HGNA+ FLM +D L F E VE+LA+ L+VP E P +R +R + L Sbjct: 61 CFGCGVHGNALRFLMEFDHLRFPEAVEQLASRLGLDVPREGADDPQAQQRERRREEAVNL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ +F+++ L AR YLE+RGLS +++ F IGFAP W+ + + + Sbjct: 121 LELSASFFRERLAMSEGGDARDYLERRGLSADIVREFGIGFAPDKWEALKRHLTERGISD 180 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 I+ G+LV + GRSYDRFR RVMFPIRD +GR I FGGRVLG+ PKYLNSPET + Sbjct: 181 AVQIEYGLLVHREDSGRSYDRFRNRVMFPIRDWKGRTIAFGGRVLGDAKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKGR+LYGLYEA+Q NA R+LVVEGYMDVVALAQ+GI A A+LGTS + DH+Q LF Sbjct: 241 FHKGRELYGLYEARQANARLERMLVVEGYMDVVALAQFGIRNACATLGTSLSEDHLQRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ C+DGDRAGR AA RALET LP M DGRQ+RF+FLP+G+DPD+LVR+EG EAF Sbjct: 301 RLVGEVVFCFDGDRAGRQAARRALETVLPSMIDGRQVRFLFLPEGDDPDSLVRREGAEAF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E R+ A PLS FLF+ DL + R R +T L + ++P L+ L +EL + Sbjct: 361 ENRVLCAAPLSEFLFDQAAEGRDLQRIEDRERFATAVLRALERLPEGVLKSLLLRELSQR 420 Query: 419 LGILDDSQLERLMP---------KAAESGVSRPVPQLKRTTMRI------------LIGL 457 G+ + L + A+ S P + + L+ L Sbjct: 421 TGVEQANFQALLARADTSQAPHDEGADEASSAPEDAGETPARKAGARDGALGLVGRLLHL 480 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 LV P L + +P + + + L E+V + LL H+ GT L Sbjct: 481 LVHEPALVSRLPESLDWCPDGVGDGALCHEVVRLIRAGGYRNAQVLLAHFHGTPEGERLA 540 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL----RQEELIARERTHG-LSNEERLELW 572 L+ + + + ++ + + + L+AR + LS EER L Sbjct: 541 WLARRELLMPREARGAEVEGLVDGLRRRHSQRSPQEEYDALLARTQAGECLSREERQRLN 600 Query: 573 TLNQELA 579 L EL Sbjct: 601 ELLMELK 607 >UniRef50_Q9KD44 DNA primase n=1 Tax=Bacillus halodurans RepID=PRIM_BACHD Length = 599 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 179/605 (29%), Positives = 285/605 (47%), Gaps = 33/605 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I ++ DI+D+I V+LKKQG+N+ CPFH E TPSF+V+ +KQ YH Sbjct: 1 MNQRIPQETIEEIRRSVDILDVIGEYVQLKKQGRNYIGLCPFHGENTPSFSVSPDKQLYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA FL + FVE VE LA N+ +P PS + + L + Sbjct: 61 CFGCGAGGNAFTFLEQIEGFTFVEAVETLAKRANVVLPERVS--PSVKQNRDEELLISIQ 118 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ L + R YLE+RG + E I F IGFAPP WD + + Sbjct: 119 EFAAKFFHHVLMLTEEGKAGRTYLERRGFTKEQIEHFQIGFAPPHWDALTNVLAKRDVDL 178 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + ++G+LV + G+ YDRFR RV+FPIR+ +G+++ FGGR LG+D PKYLNSPE+ I Sbjct: 179 KKAGESGLLVERESDGKRYDRFRNRVIFPIRNGKGKIVAFGGRTLGDDKPKYLNSPESPI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ LYG Y+A+ + N ++ EGY+DV+A + G+ VA+LGTS T + +++ Sbjct: 239 FQKGKLLYGFYQARPAIRKENEAVLFEGYVDVIAAWKAGVTNGVATLGTSLTEEQARMIR 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI C DGD AG +A +R+ + +G ++ +PDG DPD ++K G E F Sbjct: 299 RNAETVIICNDGDAAGAEATFRSADLLQQ---EGCHVKVAMIPDGLDPDDYIQKYGAERF 355 Query: 359 EA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + +++ L F +L R + I+++ R + ++L Sbjct: 356 KKDVIGESLTLMKFKMKYFRMGRNLQNEGERILYIEEIIKEIAKLSKAVERDHYLRQLAE 415 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLK--------------------RTTMRILIGL 457 + + D+ + E V Q K + RIL+ Sbjct: 416 EFSLSLDALKQEQYRIYREMKRQNQVSQGKTNTVRQKKHDFEQKRLLPAYQNAERILLAH 475 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 +++N +A V N + L ++ Sbjct: 476 MMRNVSVAETVQERLGGRFNVDHYQAIVAHLFAYYAEGFEPDPCTFIQRLEDQELIRVAT 535 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG---LSNEERLELWTL 574 +L+M + ++ I +Q D + + L +++ + + L + EL + Sbjct: 536 ELAMLE--INEEINDQELNDYIEKIEMYPKWLELQQIESALKKETDPVLYATRKQELINM 593 Query: 575 NQELA 579 ++L Sbjct: 594 KKQLK 598 >UniRef50_A4BE36 DNA primase n=1 Tax=Reinekea blandensis MED297 RepID=A4BE36_9GAMM Length = 621 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 247/622 (39%), Positives = 352/622 (56%), Gaps = 43/622 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP FI+ LL RTDI+++I R+ LKK+GK++ ACCPFHNE +PSF+VN KQFY+ Sbjct: 1 MAGLIPNDFIDSLLDRTDILEVIGNRIDLKKKGKDYWACCPFHNENSPSFSVNPGKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G A+ FL YD L FVE++EELA + +EVP E S ++ ++ QR+TL+ LM Sbjct: 61 CFGCGASGTAVKFLQEYDNLSFVESIEELARIAGVEVPREEVSEKARQQQQQRKTLHDLM 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + ++ L Q P A + Y+ RGL+ + + F IGFAPPGWDN+++ F NR Sbjct: 121 NSCADYFAHQLYQHPYAQGVQDYILGRGLTEDTVHTFQIGFAPPGWDNLIQHFRSENTNR 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDI 238 L+ GML ND GR YDRFR R+MFPIRD +GRVI FGGRV+ ++ PKYLNSPET I Sbjct: 181 A-LLKVGMLTQNDNGRIYDRFRNRLMFPIRDIKGRVIAFGGRVMSADEKPKYLNSPETPI 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG +LYGLYEA++ + + +++VEGYMDVVALAQ+G+ AVA+LGT+T+ H+Q LF Sbjct: 240 FHKGHELYGLYEARKALKDFDNIIIVEGYMDVVALAQHGVRNAVATLGTATSETHVQRLF 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ ++ C+DGD AGR AA RAL + + DG Q RF+FLPDGEDPDTLV+KEG + F Sbjct: 300 KQTSEIVFCFDGDEAGRRAAIRALTNTMSSLKDGLQARFLFLPDGEDPDTLVQKEGHDGF 359 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R++QA L FL+ L Q D+S DG+ARL++LA I++VP ++ L +L N Sbjct: 360 MRRVKQAQSLPDFLYQHLQTQADISRLDGKARLASLAQGWINKVPEGFMKQLLLNQLSNL 419 Query: 419 LGILDDSQLERLMPKAAESGVSR-----------------------PVPQLKRTTMRI-- 453 +G+ + ++ P+ PV + + ++RI Sbjct: 420 VGLSIEQIEQQFKPEPPSVPAEPMPETVIPTAPPPFDDAQGEFYSVPVIEKRELSVRIGF 479 Query: 454 ---LIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT 510 + L++ P LA V P L + ++ P ++ Sbjct: 480 VHRALAWLIRFPHLADYVTPETLGRLKASGDHQLLQRVIELLQQAPRKDLYFAFDYLCQH 539 Query: 511 NNAATLEKL----------SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR--E 558 TL + + D +K+ A Q L + + L R Sbjct: 540 GLRETLSPIAASDYLWLEAANDDHKDEKDFARQELEKILRALTQKAPDDEYNALKQRVMA 599 Query: 559 RTHGLSNEERLELWTLNQELAK 580 L++ E+ L ++ + Sbjct: 600 LDPSLTDAEKQRYRELLKQKKQ 621 >UniRef50_Q1N3T7 DNA primase n=1 Tax=Bermanella marisrubri RepID=Q1N3T7_9GAMM Length = 661 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 251/622 (40%), Positives = 348/622 (55%), Gaps = 49/622 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R +IVD++D+R+KLKK GKN ACCPFHNEKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLLHRVNIVDVVDSRIKLKKAGKNHSACCPFHNEKTPSFTVSSDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M YD ++F + VE LA +EVP E S ++ +R LY+LM Sbjct: 61 CFGCGAKGNAVGFVMEYDNVDFPQAVEMLADSVGMEVPREEVSPQQAKKQEERTNLYELM 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 N FYQ+ L+ +A YL+ RGLS + F IGFAPPGW N+ + E+ Sbjct: 121 GSANEFYQRQLRYHDAKQAAVDYLKNRGLSGKAAKFFNIGFAPPGWQNLQDSLANDDESL 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +++ AG+ + NDQGR YDRFR R++FPIRD RGR IGFG R LG+D PKYLNSPET IF Sbjct: 181 AAMVTAGLTIKNDQGRHYDRFRNRIIFPIRDVRGRTIGFGARTLGDDKPKYLNSPETPIF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +KG++LYGLYE +Q R L+VEGYMDVVAL ++GI+YAVA+LGT+T+ H+Q LF+ Sbjct: 241 NKGQELYGLYECRQIRQPLKRFLIVEGYMDVVALHEFGIHYAVATLGTATSDTHLQKLFK 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ C+DGD AGR AA R LE LP + DG+Q+RFMFLP+GEDPD+LVRKEGK+ FE Sbjct: 301 IAPEIVFCFDGDEAGRRAAKRGLELVLPIIEDGQQIRFMFLPEGEDPDSLVRKEGKDGFE 360 Query: 360 ARMEQAMPLSAFLFNSLMPQV-DLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 RM+ A LS FL +L + D ++ +GRARL+ LA PLI +PG LR Q+L Sbjct: 361 LRMQDADGLSEFLLQTLKDDIDDPASLEGRARLAKLAAPLIKNIPGIALRSLFWQDLKEH 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVP---------------------------------- 444 I D + +A P P Sbjct: 421 THIDVDELKQLAESEAKPELAPAPNPMVQSSAASHHHEHYESSYSSYDEEMGESREQPIQ 480 Query: 445 -----QLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLT 499 + +R I +L+ P+ L E + P L ++++ P Sbjct: 481 STTSGSQEPRLIRQAIAILLHAPQALETFGDTGFLQEFQGPNTQLLQQMITALRQSPRQD 540 Query: 500 TGQLLEHYR---GTNNAATLEKLSMWDDIADKNIAEQTF-TDSLNHMFDSLLELRQEELI 555 +L ++L+ + + + ++++Q D L + + + +I Sbjct: 541 LLGVLSLLNKEVDAEAYRQFKELAEYHNKQEGHLSQQQVAMDCLVQLRLKAAKNIKARMI 600 Query: 556 ARERT----HGLSNEERLELWT 573 + L ++ Sbjct: 601 KKAAQFGGMRQLPEQDMQLYQW 622 >UniRef50_P57029 DNA primase n=32 Tax=Neisseriaceae RepID=PRIM_NEIMB Length = 590 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 237/581 (40%), Positives = 342/581 (58%), Gaps = 27/581 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI++LLA+TDIVD+ID +V LKK G N+ ACCPFH EKTPSF+V+ KQFYHCF Sbjct: 1 MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKTPSFSVSPTKQFYHCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG- 122 CGAHG+AI F+M + L F E V+ LA + VP G + R +R+ Q ++ Sbjct: 61 CGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMVVPKVHGQNDNPEVRAERKKKQQTLEET 120 Query: 123 ---LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY Q L+ +A+ YL+KRGLS EVIA + +G+AP GW + + F P Sbjct: 121 TAAAADFYAQQLK--FNPAAKAYLDKRGLSAEVIAHYGLGYAPDGWQPLTQVFQ--PYPN 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +L+D GM++ N+ GR YDRFR R+MFPIR+ RG+VIGFGGRVL + PKYLNSP+T +F Sbjct: 177 TALVDTGMVIDNE-GRHYDRFRHRIMFPIRNPRGQVIGFGGRVLDDSKPKYLNSPDTPLF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ LYGLYE + E R+LVVEGYMDVVALAQ+G+ Y VA+LGT+TTA+H+++L R Sbjct: 236 DKGKNLYGLYEGRAAVKEAGRILVVEGYMDVVALAQFGVGYGVAALGTATTAEHVKILMR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ C+DGD AGR AAWRALE ALP + D + L F+FLP+ DPD+ +R GK FE Sbjct: 296 QADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFLFLPEEHDPDSYIRAYGKAQFE 355 Query: 360 A-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + Q+ PLS + + L + L+T +G+A L + PL++Q+ L L+Q L Sbjct: 356 DALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTSSPLLAQITAPALAYLLKQRLSEL 415 Query: 419 LGILDDSQLERLMPKAAESGVSR-----PVPQLKRTTMRIL----IGLLVQNPELATLVP 469 +GI D+ + L +A + V + P +K+ M L I L+ NP+ A + Sbjct: 416 VGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQPVMLTLVQRQIRSLLINPDWAAYID 475 Query: 470 PLENLDENKLPGLGLFRELVNTCLSQPGL-TTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + L + L + + + T Q+LE+ RG+ T+ ++ +++ Sbjct: 476 LPDYLALDGD--FACLANLAESIKNHAAVPETAQVLEYMRGSPYEETITRIFHSTHQSEE 533 Query: 529 NIAE-----QTFTDSLNHMFDSLLELRQEELIARERTHGLS 564 + + F + + + L + E L + GL+ Sbjct: 534 MNSSSEEDCENFQIGMKKLLNELKYSQIETLKQKSLQSGLN 574 >UniRef50_Q5P264 DNA primase n=3 Tax=Betaproteobacteria RepID=Q5P264_AZOSE Length = 609 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 245/602 (40%), Positives = 338/602 (56%), Gaps = 34/602 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLLAR DIVD+I+ + LKK G N+ ACCPFH EK+PSF+V+ KQFYHCFG Sbjct: 1 MIPQSFIQDLLARVDIVDVIERHLPLKKGGANYFACCPFHGEKSPSFSVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+A+ FLM Y L FVE V+ELAA L+VP E G P + L + M Sbjct: 61 CGAHGSAVGFLMEYSGLPFVEAVKELAAQAGLQVPQERGPNPRNDKNPAHAALIEAMTVA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 Y+ L+ A++A YL++RG+S E+ ARF IG+AP W + F + ++L+ Sbjct: 121 ARHYRDQLR--QASAAIDYLKRRGVSGEIAARFGIGYAPDDWQGLRSIF--PDYDAKALL 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 +AG+++ N+ GR YDRFR R++FPI+D+RGRVI FGGRVL + PKYLNSPET +F KGR Sbjct: 177 EAGLVIENEAGRRYDRFRNRIVFPIQDRRGRVIAFGGRVLDSGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL +AQ+ + +VVEGYMDVVALAQ+GI +VA+LGT+TT HI +L R + Sbjct: 237 ELYGLLQAQKSIRDAGHAIVVEGYMDVVALAQHGIGNSVATLGTATTTHHINVLLRQSQR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AA RALE++L + D L F+FLP+ DPD+ VR G +AF Sbjct: 297 IVFCFDGDAAGRKAARRALESSLEALRDDVTLAFLFLPEQHDPDSFVRAHGADAFRQAAG 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A L+ FL L L T +GRARL A PL++++ LR+ + + + Sbjct: 357 AATTLTNFLLRELQSNCALDTAEGRARLVHEAKPLVTRITAPMLRLQIVKSIAEACQFSQ 416 Query: 424 DSQLERLMPKAAESGVSRP-------------------------VPQLKRTTMRILIGLL 458 +E G RP + +T+ L+ L+ Sbjct: 417 SEIERAYG--LSEEGRERPGEHAAAGPHHHPAAAPPRRLTPGMRPRRKPPSTVGTLLRLV 474 Query: 459 VQNPELATLVP-PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 +Q+P LA +P L + L + NT + G L+E +R T + TL Sbjct: 475 LQHPALAARLPVDLVPTMNAEGEALVAIIDATNTGDLAANVGLGALVERFRETPHGETLA 534 Query: 518 KLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 K + D D+ + E F D+L + + + L ARER GLS+ ER L L Sbjct: 535 KTAGELVDAEFDEAVVEVLFEDTLRKLHADTIAREIDGLTARERESGLSSIERHRLAALL 594 Query: 576 QE 577 E Sbjct: 595 IE 596 >UniRef50_A4J7C0 DNA primase n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J7C0_DESRM Length = 604 Score = 550 bits (1418), Expect = e-155, Method: Composition-based stats. Identities = 173/600 (28%), Positives = 290/600 (48%), Gaps = 33/600 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP I ++ RTDIV++I + ++K+GKN+ A CPFH EKTPSF +N E+Q +H Sbjct: 1 MAGRIPDSVIEEIRQRTDIVEVISRFIHVEKRGKNYLALCPFHQEKTPSFNINPERQMFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + L F E+V L +EVP E ++++ ++ +++ Sbjct: 61 CFGCGVGGNVFKFLMMVEGLSFPESVRSLGTKLGIEVPEEISPKE-RVKQGKKDRAFKIY 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY L + + A +YLE R L+ + F +GFAP GWD++ + + Sbjct: 120 GLARDFYHFLLTKEIGIGAIRYLESRNLTDKTRETFELGFAPLGWDSLTGFLTAKGISGE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L G++ + G YDRFR R+MFPI D +GRV+GFGGR +G D PKYLNSPE + F+ Sbjct: 180 ELTKLGLVQKKESGGYYDRFRNRIMFPIWDNQGRVVGFGGRTMGEDNPKYLNSPEGEYFN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGL+ A++ E +++EGYMDVV+ Q+G+ AVASLGT+ T D ++L Sbjct: 240 KGQLLYGLHIARKGIREQGYAVLMEGYMDVVSTYQHGVTNAVASLGTAFTRDQGKILMMY 299 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T++V+ YD D AG AA RA + G Q+R + +DPD ++ G E +++ Sbjct: 300 THDVVIAYDADTAGIKAATRAADILQEL---GCQVRIATIVGAKDPDEYIQSHGLEGWQS 356 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ AMPL + + L + R+ LP ++ V ++ L Sbjct: 357 IIDHAMPLVQYKLLQAAQKHGLQNAGAKQRILREVLPNLASVASAIELEETVKQAATVLQ 416 Query: 421 ILDDSQLERLMPKAAESGVSRPVP----------------------QLKRTTMRILIGLL 458 + ++ LE + S + + ++ Sbjct: 417 VNWETVLEEIKKYKRNSRKKSQIEDNFAKESHNISSARYFAPVRPKDARSNAEAGVLRFA 476 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 ++N E + D + +++ + + L + +LL+ ++ Sbjct: 477 LENKEYLERILQELGNDFFQN---NVYQRIFDVHLGNKEQNSARLLDELDESSQRIVSSL 533 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 L +Q +D +N + + + + ++L+ + S + + L++++ Sbjct: 534 LVQ---EIPGENMDQILSDFINTIKRTREKAKLDDLLMQLAAAEKSG-DTERVIELSRKI 589 >UniRef50_P0A118 DNA primase n=25 Tax=Bacteria RepID=PRIM_PSEPK Length = 660 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 231/441 (52%), Positives = 314/441 (71%), Gaps = 3/441 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DL+ R DIVD++ +RV+LKK GKN+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MAGLIPQSFIDDLINRLDIVDVVSSRVQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M++D L+F + VEELA +EVP E G + + LY L+ Sbjct: 61 CFGCGAGGNALGFVMDHDNLDFPQAVEELARAAGMEVPREQGRRDQKPRQPTDSPLYPLL 120 Query: 121 DGLNTFYQQSLQQPVATSA-RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D + FY+Q+L+ + A YL+ RGLS E+ F +GFAPPGWDN+LK G + + Sbjct: 121 DAASEFYRQALRSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLLKHLGADTLQQ 180 Query: 180 QSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + +IDAG+L+ N + G+ YDRFR+RVMFPIRD RGR+I FGGRVLG+D PKYLNSPET + Sbjct: 181 KVMIDAGLLIENAESGKRYDRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA++ N + ++VVEGYMDV+ALAQ G+ AVA+LGT+T+ +H++ LF Sbjct: 241 FHKGQELYGLYEARKHNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R +V+ C+DGD+AGR AAWRALE+ L + DGR+ RF+FLP+GEDPD+LVR EG +AF Sbjct: 301 RVVPSVLFCFDGDQAGRKAAWRALESTLSNLQDGRRARFLFLPEGEDPDSLVRAEGTDAF 360 Query: 359 EARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 AR+ Q + PL+ + F L + D + +G+A ++TLA PLI ++PG LR +R L Sbjct: 361 MARINQHSQPLADYFFEQLGVEADPRSLEGKAHMATLAAPLIEKIPGANLRQLMRNRLKE 420 Query: 418 KLGILDDSQLERLMPKAAESG 438 G+ + A S Sbjct: 421 ITGLDPQQVEQLAQQAPATSS 441 >UniRef50_A9VHS2 DNA primase n=68 Tax=Bacillus RepID=A9VHS2_BACWK Length = 600 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 179/605 (29%), Positives = 284/605 (46%), Gaps = 29/605 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + + +DIV++I V+L+KQG+N+ CPFH E +PSF+V+ +KQ +H Sbjct: 1 MGNRIPEEVVEQIRTSSDIVEVIGEYVQLRKQGRNYFGLCPFHGENSPSFSVSSDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT---LY 117 CFGCG GN FLM + L F E V++L + + V Q + + Sbjct: 61 CFGCGEGGNVFSFLMKMEGLAFTEAVQKLGERNGIAVAEYTSGQGQQQQEDISDDTVIMQ 120 Query: 118 QLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 Q + L +Y L A YL KRG++ E+I +F IG+A WD K Sbjct: 121 QAHELLKKYYHHLLVNTEEGNEALSYLLKRGITKEMIEKFEIGYASQAWDAATKILQKRG 180 Query: 177 ENRQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPE 235 + S+ AG+LV ++ G YDRFR RVMFPI +G+VI F GR LG+DTPKYLNSPE Sbjct: 181 LSLSSMEQAGLLVRSEKDGSHYDRFRGRVMFPIYTLQGKVIAFSGRALGDDTPKYLNSPE 240 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T IF+K + LY ++A+ + ++++ EGY DV+A + G+ AVA++GT+ T + + Sbjct: 241 TPIFYKSKLLYNFHQARPFIRKRGQVVLFEGYADVLAAVKSGVEEAVATMGTALTEEQAK 300 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 LL R V+ CYDGD+AGR+A +A + L G Q++ LPD DPD V++ G Sbjct: 301 LLRRNVETVVLCYDGDKAGREATMKAGQLLLQV---GCQVKVTSLPDKLDPDEYVQQYGT 357 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AFE ++ ++ F N L +L G+ L +S + + L Sbjct: 358 TAFENLVKSSISFVGFKINYLRLGKNLQDESGKEEYVKSVLKELSLLQDAMQAESYLKSL 417 Query: 416 GNKLGILDDSQLERL----------------MPKAAESGVSRPVPQLKRTTMRILIGLLV 459 + ++ L +L + K ++ ++P R +I ++ Sbjct: 418 SQEFSYSMETLLNQLHQYRKEQKVQQKQIKQVSKPSQIVQTKPKLTGFERAEREIIYHML 477 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 Q+ E+ + P D G+ EL + G L + + Sbjct: 478 QSAEVTVRMEPHIE-DFYTEEHKGILYELYAYYEKGNEPSVGTFLSWLSDEKLKNIITDI 536 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE-ERLEL--WTLNQ 576 S D+ + E+ L + +L + E+I + + ++ E + L Sbjct: 537 ST-DEFINPEYTEEALQGHLEALRRHKEKLEKMEIIFKVKQMEKTDPVEAAKYYVAYLQS 595 Query: 577 ELAKK 581 + A+K Sbjct: 596 QKARK 600 >UniRef50_C6WZ17 DNA primase n=4 Tax=Betaproteobacteria RepID=C6WZ17_METML Length = 595 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 238/576 (41%), Positives = 325/576 (56%), Gaps = 12/576 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 17 LIPESFIQELLNRVDIVDVIDKSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFG 76 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG ++ F+M Y L FV+ + +LA M + VP E + L + + Sbjct: 77 CGAHGTSVGFIMEYQGLSFVDAIHDLAKMVGMTVPQEVRDS-DKPAPKVVVGLQEALQQA 135 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+ L++ + A +YL+ RGLS +V A+F +G+AP GW N+ F ++L Sbjct: 136 ANFYKAELKK--SPRAIEYLKARGLSGQVAAKFQVGYAPAGWQNLQSVFPQ--YENEALT 191 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKG 242 AG++V N+QGR YDRFR+R+MFPI D++G+VIGFGGRV+ DTPKY NSPET +F KG Sbjct: 192 VAGLVVENEQGRRYDRFRDRIMFPIHDQKGQVIGFGGRVINPEDTPKYYNSPETPLFQKG 251 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 +LYGL+ A++ + R LVVEGYMDVVALAQYGI YAVA+LGT+TT HI L R + Sbjct: 252 HELYGLFLARRAIRDAGRALVVEGYMDVVALAQYGIEYAVAALGTATTPYHITKLTRQAD 311 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 ++ C+DGD AGR AAWRA ALP +TDG +L F+FLP DPD+ VR+ GKE FEA + Sbjct: 312 EIVFCFDGDNAGRTAAWRAAMNALPALTDGLKLSFLFLPKEHDPDSYVREFGKEKFEAEI 371 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AMPLS ++ L L + + R R A P++ Q+ +YLR+++ + Sbjct: 372 KSAMPLSQYILQHLSEDNPLQSQEDRVRFLNEAEPIMQQISAPRSAMYLRKKVAELAQLS 431 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTM---RILIGLLVQNPELATLVPPLENLDENKL 479 D L + P+L RTTM + +L+ +PELA L + Sbjct: 432 ADEMQALLKLPNLNKAPMKAKPKLTRTTMSLQKRFGLMLLMHPELAQ--EDDLELLSERD 489 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN-IAEQTFTDS 538 L R+++ CL P LL +A L +L + D Q + Sbjct: 490 DADALLRQVIEICLLHPHSKPAVLLRELESKIDANVLPELQRELTLLDDTLDHAQELAGA 549 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + + L+AR LS E+ L Sbjct: 550 RQQLQAVHTQRQSASLLARISEKPLSALTADEIALL 585 >UniRef50_A3DDV1 DNA primase n=4 Tax=Clostridium thermocellum RepID=A3DDV1_CLOTH Length = 600 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 182/591 (30%), Positives = 299/591 (50%), Gaps = 33/591 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I ++ DI+ ++ VKL+++GKN+ CPFH+EKTPSF+V+ KQ Y+ Sbjct: 1 MYKYYPEELIEEIRMSNDILSVVGEYVKLERKGKNYFGLCPFHSEKTPSFSVDPNKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+++E V+ LA +++P E + +I ++Q L ++ Sbjct: 61 CFGCGKGGSVIQFVMEVENLDYIEAVKMLAERARIQLP-EGDNEEERIIARKKQELLRIN 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ + L + R+YL KR +S + +F +G++P WD + + + Sbjct: 120 VEAARFFYEQLNDKKNLAPREYLTKRKVSGSIARKFGLGYSPEEWDALYNHLRKKGYDDE 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+D+G+++ G YDRFR R++FPI D RG VIGFGGRVL N TPKY+NSPET +++ Sbjct: 180 ILLDSGLILKGKNGGYYDRFRGRIIFPIFDLRGNVIGFGGRVLDNSTPKYMNSPETLVYN 239 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K + LYGL A+ R++VVEGYMDV++L Q+GI VASLGT+ T ++L + Sbjct: 240 KRKNLYGLNFAKNS--GQKRIIVVEGYMDVISLFQFGIINTVASLGTALTESQGRILKKY 297 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 +I YD D AG A R L+ G ++ + +P+G+DPD V+K G EAF Sbjct: 298 AEEIIISYDADTAGMAATMRGLDLL---NDIGCNVKVLIIPEGKDPDEFVKKNGPEAFNK 354 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +E A+ L + +L +D +T +G+ A L+S++ R +++ + Sbjct: 355 LVENALSLVEYKIKALKSTIDTNTTEGKINFLNKAADLLSKIDNNMEREMYIKKISKEYD 414 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQ-----------------------LKRTTMRILIGL 457 I +S ++ + V +P+ + R+L+ L Sbjct: 415 ISQESIYAEILKRIKPKTVYKPLTRTLTAKNDNNRLKIEKNGKKSSYDKIIECERMLLCL 474 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELV-NTCLSQPGLTTGQLLEHYRGTNNAATL 516 L + L +V +DE K ++V + G+ +L+ G + Sbjct: 475 LSIDNSLYKVVKDKIIVDEFKDEQNKEIAKIVFKRFEEKKGIVPAELIN-LAGEETSGVF 533 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 +L + D NI + D + M LE RQ+E++ + + LS E+ Sbjct: 534 ARLIQGECNFDDNI--KAVMDIIKKMELYRLEDRQKEILQQLSSGNLSTED 582 >UniRef50_B8FBL4 DNA primase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FBL4_DESAA Length = 599 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 180/593 (30%), Positives = 283/593 (47%), Gaps = 22/593 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I+ + +IVD+I + LKK G NF CPFH EKTPSF+VN ++QF+H Sbjct: 1 MARFSPDDQISHVRNSVNIVDVISDYMVLKKAGNNFVGLCPFHAEKTPSFSVNPDRQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ DF+M + L F E + LAA +E+ + Q +R LY Sbjct: 61 CFGCGEGGDVFDFVMRQNNLTFPEALASLAARAGIELAPRKMTPQQQKIVAERDALYAAN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D F+ +SL P A+ AR+YL+KR + EV+ F +GFAP W + G Sbjct: 121 DFARDFFVKSLNAPQASQAREYLKKREMPQEVLETFMLGFAPDEWRALSGFLQGKGVPSH 180 Query: 181 SLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 AG+LV + G YDRFR R++FPI D GR+ GFGGRV+ + PKYLNSP+T I+ Sbjct: 181 RAEKAGLLVHKEGGGNVYDRFRNRIIFPIHDISGRIAGFGGRVMDDALPKYLNSPQTPIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R LYGLY+A+Q+ + +VEGY DV+AL +GI AVA+ GT+ + DH++++ Sbjct: 241 DKKRMLYGLYQARQECRKTGVAFMVEGYFDVLALYAHGIRNAVATCGTALSPDHVRIIKG 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ +D D AG +AA ++L + + Q + + LP G DPD+ VR G + F Sbjct: 301 YAKKVVLVFDSDTAGINAARKSLPL---FEAEKVQAKVLVLPAGHDPDSFVRDFGAKDFL 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 E + FL S + + LS +G+A + ++ V R +++ KL Sbjct: 358 EAAENRQDMIPFLMESAIARHGLS-IEGKANVVAEIKEQVAAVSDGVTRSLYIKQIAEKL 416 Query: 420 GILDDSQLERLMPKAAESG----------VSRPVPQLKRTTMRILIGLLVQNPELATLVP 469 G+ + + L+ + A ++P ++ ++V+ PE A V Sbjct: 417 GVDEAAVLDAVRDAAKTRPKRLPGTVHEEQAKPAEPAPDRMETAILQMMVRCPECAPKVA 476 Query: 470 PLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + + L ++ + ++ ++ + L ++ DD + Sbjct: 477 EKRLIKYFSSNRVRALGLRILEFIQAGGDPEGAGIMSLAVEQDDRSLLARILAHDDPLEL 536 Query: 529 N---IAEQTFTDSLNHMFDSLLELRQEELIAR---ERTHGLSNEERLELWTLN 575 F S+ + L+ R ++ + L E+ L L Sbjct: 537 PGCMAIIDQFEQSITRRNHAELDRRIQQAQTEGHHDLALRLLVEKNELLKALQ 589 >UniRef50_Q7VQR1 DNA primase n=2 Tax=Candidatus Blochmannia RepID=Q7VQR1_BLOFL Length = 588 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 263/586 (44%), Positives = 387/586 (66%), Gaps = 8/586 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I++L++RT+IV +I+ R+ LKKQG NF ACCPFH EKTPSFTVN +K+FY+ Sbjct: 1 MINRIPQALIDELISRTNIVHIINQRIPLKKQGSNFIACCPFHVEKTPSFTVNLKKKFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG+HGN I+FLM++D+L F+E++++L+ +H + + + ++ + +Y M Sbjct: 61 CFSCGSHGNIINFLMHHDQLTFIESIQQLSILHGISI--KHFLYKTKNNNYHGDIIYTFM 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + +YQ +L+ + A +YL+ RGL+ I F IGFAP GW+N+L + N + Sbjct: 119 RDICNYYQNNLKHKKYSYAYKYLKNRGLTDSSIIDFKIGFAPMGWNNILTNINLSSYNHK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDI 238 + +GM + Q + YDRFR R+MFP+ +K G++I FGGR++ N+ PKYLNSP+T I Sbjct: 179 LIHQSGMWIKYHQNKKYDRFRNRIMFPMHNKLGKIIAFGGRLIQNNNTEPKYLNSPDTYI 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + LYG YE +L+VEGY+DV+ L Q+G+NYAVASLGTS T +HIQL++ Sbjct: 239 FKKNQYLYGFYEICTKYKNIPYILLVEGYIDVIILTQFGVNYAVASLGTSITINHIQLIY 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 TN +ICCYDGD AG+ AAWR L LPY+ D R++ FMFLP EDPDTL+RK GK+ F Sbjct: 299 SVTNQMICCYDGDSAGKKAAWRTLNIILPYLHDHREICFMFLPVKEDPDTLIRKIGKDNF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ +A LS F+F++L+ +V + T +GR +LS L LP+I+++PG+ L++ L Q+L NK Sbjct: 359 LKQISKAQSLSNFIFDTLLHKVKIQTLEGRVKLSHLILPMINKIPGQILKLCLLQQLSNK 418 Query: 419 LGILDDSQLERLMPKAAESGVSR-PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 +GILD+++L +L+ + + + S + ILIGLL+QNP+LA LVP ++ L E Sbjct: 419 IGILDENKLNQLLIQHSPTLTSNVQNNDITYNIKHILIGLLIQNPKLAKLVPTIKGLKEC 478 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE---KLSMWDDIADKNIAEQT 534 K + F +LV C S P LTT QL+ +Y + +L+ W+ + ++ T Sbjct: 479 KDNIIIEFVKLVKLCKSYPYLTTEQLIHYYHQHDENNCFTNIIRLAHWNHMITDDMITVT 538 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 F D+L ++D +LE RQ LI+R+RT L EER ELW LNQ L+K Sbjct: 539 FIDTLTKLYDLILEHRQNILISRDRTSTLKIEERQELWLLNQTLSK 584 >UniRef50_Q21MV0 Histidine kinase n=2 Tax=Alteromonadales RepID=Q21MV0_SACD2 Length = 656 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 261/652 (40%), Positives = 369/652 (56%), Gaps = 78/652 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ RIP+ FI+DLL R DIV++ID RVKLKK GKN+ ACCPFH EKTPSFTV+ +KQFY+ Sbjct: 1 MS-RIPQSFIDDLLNRLDIVEVIDHRVKLKKAGKNYSACCPFHEEKTPSFTVSPDKQFYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA+GNA+ FLM Y++ FV+ VE LA + ++VP E + + QR LY ++ Sbjct: 60 CFGCGANGNAVGFLMEYERQGFVDAVESLARVAGMQVPKETTEKDVKHAKKQR-GLYDIL 118 Query: 121 DGLNTFYQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +T+YQ+ L++ + A YL+ RGLS + F +G+APPGWDN+L + G N E+R Sbjct: 119 GLASTYYQKQLKEHSSRERAVSYLKGRGLSGAIARDFGMGYAPPGWDNLLVKLGTNEEDR 178 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L+++G+++ + +G+ YDRFR R+MFPI+D RGRVIGFGGRVLG+D PKYLNSPET + Sbjct: 179 HLLVESGLVIRKEGEGKLYDRFRHRIMFPIKDTRGRVIGFGGRVLGDDKPKYLNSPETPV 238 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR+LYGLYEA+Q N + RLLVVEGYMDV+ALAQYG+ AVA+LGT+ DH++L F Sbjct: 239 FSKGRELYGLYEARQSNRKLERLLVVEGYMDVIALAQYGMRNAVATLGTACGEDHLKLAF 298 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R N V+ C+DGD AGR AA RAL ALP M DGRQ+RF+FLP+G+DPDTLVR+ G E F Sbjct: 299 RYVNEVVFCFDGDNAGRTAAKRALVNALPAMEDGRQIRFLFLPEGQDPDTLVRQIGAERF 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A++E +PL FLF+++ +D+++ +GRAR LA PL++ +P R + L + Sbjct: 359 TAQIENGVPLEEFLFDAVAEGIDVNSMEGRARFGKLAAPLLNTLPNGIYRELMFANLAKR 418 Query: 419 LGILDDSQLERLMPKAA-ESGVSRPVPQLKRTTMRILIGLLVQN----------PELATL 467 G+ D LE K + + ++P P + L L N P + Sbjct: 419 TGLSLDLLLELTKEKVSLVAEPAKPDPSQQPQPEPELPAHLGANIGTSISASTPPHIDES 478 Query: 468 VPPLENLDENKLPGLGL----------------------------FRELVNTCLSQPGLT 499 + L+ + + + +LV T + P Sbjct: 479 YAHIPPLEPDYVARTAQTSAPKSAPVKRSSITLNPVRLCTILLLEYPKLVATLNNIPARA 538 Query: 500 TGQ---------LLEHYRGTNNAATLEKLSMWDDIADKNIA------------------- 531 + L+E+ + N + L W Sbjct: 539 ETEDEELTRLFDLIEYIQQRPNCSFNSILGYWGGRYGIEQQQALADLVANQLMGSVRSVE 598 Query: 532 ----EQTFTDSLNHMFDSLLELRQEELIARERTHG---LSNEERLELWTLNQ 576 EQ SL + L + ++ +A+ + G L+NEE+ L + Sbjct: 599 NYNPEQELEQSLARIGQKLQKANNQKELAKLQAKGLGNLNNEEKERFRELVR 650 >UniRef50_Q2RKT6 DNA primase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKT6_MOOTA Length = 605 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 181/593 (30%), Positives = 286/593 (48%), Gaps = 21/593 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M + I+++ R DIV++I V+LKK+G+++ CPFHNEKTPSFTV+ +KQ ++ Sbjct: 1 MTTAFNQDVIHEVKDRIDIVEIIGGYVQLKKRGRSYVGLCPFHNEKTPSFTVSPDKQVFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G+ + FLM + L F E + LAA +E+ E + ++ +R ++ LY+L Sbjct: 61 CFGCGAGGDVLTFLMKREGLSFPEALAALAARAGVELVGEEETPAARRQRELKERLYRLG 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +FY + L + P AR YL++RG+ +F +GFAP ++ Sbjct: 121 AIAASFYYRILARHPAGAPARSYLQRRGIKGVTARQFELGFAPDAGAVLVNYLQRQGFTP 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + + AG+ ++ DRFR R+MFPI+D R RVIGFGGRVLG PKYLNSPET +F Sbjct: 181 EEIEQAGLSLSRPPRGLVDRFRGRLMFPIKDSRSRVIGFGGRVLGEGQPKYLNSPETILF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG L+GL+ + + R ++VEGYMD++A Q+GI+ VASLGTS T + L + Sbjct: 241 HKGHHLFGLHLSLPGIRKEGRAILVEGYMDMIAAWQHGIDNVVASLGTSLTPAQARELKK 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 VI YD D AG+ A R L+ G Q+R + LP+G+DPD + G EAF Sbjct: 301 YAREVIIAYDADTAGQAATLRGLDIL---AAAGLQVRVLQLPEGKDPDEFLAARGPEAFR 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + + L F + + + D T GR + T LP + QV + + L Sbjct: 358 ELVAGSQGLMEFRIHKAVSEHDAGTAAGRKAIMTALLPYLRQVRDAVEQETYARLLNRYT 417 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLK----------RTTMRILIGLLVQNPELATLVP 469 GI + + L + A + ++ L+ + +P LAT + Sbjct: 418 GISETAILNDIRRPEARLDRAVKTTYIRDGRAGGTAAPHQAELFLLRAYLASPALATRID 477 Query: 470 PLENLDE-NKLPGLGLFRELVNTCLSQPGL---TTGQLLEHYRGTNNAATLEKLSMWDDI 525 + L + P L +L R A L +L++ +D+ Sbjct: 478 AELGENWCRDQAARDLVAAVRERRRENPELTGPDLAGILTPGREPQQEALLARLTLAEDL 537 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 E+ ++ + L + + L + ++ ++ L ++ Sbjct: 538 GPVE--ERAVNKAIRLLKLQQLRRQSKSLWLALARAEDTGDQ-EQVRELQGKI 587 >UniRef50_P32000 DNA primase n=5 Tax=Buchnera aphidicola RepID=PRIM_BUCAP Length = 579 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 284/582 (48%), Positives = 404/582 (69%), Gaps = 4/582 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G+IP+ FIN+LL RT+IV+LI+ R+KLKK GKN+ CPFHN+KTPSFTV+ EKQFY+ Sbjct: 1 MSGKIPKYFINELLFRTNIVELIETRIKLKKNGKNYQTHCPFHNDKTPSFTVSYEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAIDFL+NYD L FVE++EELA +H++E+PF+ + ++Q LY LM Sbjct: 61 CFGCSAHGNAIDFLINYDNLNFVESIEELATIHSIEIPFDKKGTIEKKIYLKKQKLYFLM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D ++ YQ+++ SA +YL +RG++ +I F IGF+ WD K+F + + Sbjct: 121 DKMSKLYQKNI--IFTNSANKYLTERGINKNMIDFFCIGFSSNKWDLFSKQFNIKKDFEK 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIF 239 L+ ++ TN G YD F+ R++FPI D+ GR+I FGGR + N+ PKYLNS E DIF Sbjct: 179 DLLHYKIISTNKNGYIYDTFQGRIVFPIHDQHGRIISFGGRSITNNILPKYLNSHENDIF 238 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+Q+YGLY+ ++ +++P LLVVEGY+DV+ L QY I Y V+SLGTS T +HIQ+LFR Sbjct: 239 HKGKQIYGLYQVKKKHSKPKYLLVVEGYIDVIMLTQYNIEYVVSSLGTSITKEHIQILFR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN VI CYDGD AGR+A+WR L+ ALPY++D + ++F+ LP+ EDPDT+++KEG++ F+ Sbjct: 299 HTNTVIYCYDGDDAGRNASWRTLKIALPYISDKKNIKFIILPNNEDPDTIIKKEGQKKFQ 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R++ A+ +S F F +++ VDLS+ D + LS ALPLI+ + +T+RIYLRQ L + Sbjct: 359 LRIDNALTMSKFFFKNILKNVDLSSDDDKFHLSVRALPLINCISSDTIRIYLRQILARTI 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKL 479 GI+DD Q E+ + + S Q+K T MR LIGLL+QNP LA LVP + + K+ Sbjct: 419 GIVDDYQFEKFLYEKERKKKSLQF-QIKHTPMRTLIGLLIQNPNLARLVPSTKKFENEKI 477 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSL 539 GL +F E++ TC P TGQLLE YR + L+ LS WD + K + F D L Sbjct: 478 QGLPIFLEILKTCSDNPNFNTGQLLEFYRYSKIINILKILSKWDHMIIKEKIQNMFLDLL 537 Query: 540 NHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + +LE RQE+LIA+ER GL+ +E+ E+W++N++L+KK Sbjct: 538 KNTYSKILEKRQEKLIAKERIQGLTIDEKKEIWSINKKLSKK 579 >UniRef50_Q5WHD1 DNA primase DnaG n=2 Tax=Bacillus RepID=Q5WHD1_BACSK Length = 603 Score = 538 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 179/609 (29%), Positives = 293/609 (48%), Gaps = 34/609 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +IP + ++ +DIV++I V+LKKQG+ + CPFH+EKTPSF+V+ +KQ YH Sbjct: 1 MAVKIPDEKLTEVREASDIVEVIGEYVQLKKQGRQYGGLCPFHDEKTPSFSVSEDKQVYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GN FL F ETV LA + +P + + E + + + + Sbjct: 61 CFGCGAGGNVFTFLQELKGWSFSETVSHLAERAKIALPQMQKTETDKPEDARIRQMKKGH 120 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + Y L R Y ++R + + I F IG+A W+ + F N + Sbjct: 121 ELAASTYHSILTLTEEGAPGRVYAQERLFTQDQIEHFRIGYALNDWETLAVIFETNGLDL 180 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + ++G+L QG YD FRER+MFPI D +G V+ FGGR +G PKYLNSPET I Sbjct: 181 AVMAESGLLAKRKQGTGYYDLFRERLMFPITDSQGSVVAFGGRAIGEGQPKYLNSPETPI 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK + L+ ++EA+ + N+ L+VEG DV+A + G+ VA+LGT+ ++DH +LL Sbjct: 241 FHKAKTLFHMHEARPSIRKQNKALLVEGAFDVMAAWKAGVTNVVATLGTALSSDHAKLLR 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R VI CYDGDRAGR+A +A+ G ++ LP+G DPD V++ G+EAF Sbjct: 301 RNAEEVILCYDGDRAGREAIRKAIPVLEE---AGCKVSICLLPEGLDPDDYVKQHGEEAF 357 Query: 359 EARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 ++ + + AF L ++ R + + +++++ + Y Q+L Sbjct: 358 VRILDNECLSVMAFRMLDLKQGKNMQNEGDRLQYIEEIVQMLAKLEHSVEQEYYLQQLAE 417 Query: 418 KLGILDDSQLERLMPKA----------------------AESGVSRPVPQLKRTTMRILI 455 + D + L + G +RPVP + RIL+ Sbjct: 418 SFTLPMDVLRQELSRAERLLKQTKETPKALPRAEKPTSGRKQGSARPVPAHVK-AERILL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 ++Q+ E+ V N L+ L++ +P + + +E A Sbjct: 477 AYMLQDTEMVWRVSEKLGTGFNLEEHQALYAYLLSFVTREPDASMKRFVESLEDRRLAKL 536 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHMFD--SLLELRQEELIARERTHGLSNEE-RLELW 572 L M +++ D + + ++L++++ AR + + ++EL Sbjct: 537 AAYLLMQ--PLKNECSDEELADYIKRIEQYPKWVKLKEQQQAARFEQDPIRAAKLQMELI 594 Query: 573 TLNQELAKK 581 L +EL + Sbjct: 595 RLKKELQSQ 603 >UniRef50_C4ZKA1 DNA primase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKA1_THASP Length = 631 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 237/625 (37%), Positives = 335/625 (53%), Gaps = 58/625 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ F+ +LL+R DIVD+I+ + LKK G N+ ACCPFH EK+ SF+V+ KQFYHCFG Sbjct: 1 MIPQSFVQELLSRVDIVDVIERYLPLKKSGANYFACCPFHGEKSASFSVSPSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG HG+A+ FLM Y L FV+ ++ELAA L+VP + G + + + LY+ M Sbjct: 61 CGVHGSAVGFLMEYSGLGFVDAIKELAAQVGLQVP-DDGRSAAPVHDDPSERLYEAMAVA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY+ L+ + A YL++RGLS EV ARF +G+AP W + K F ++L Sbjct: 120 ARFYRDQLK--PSRQAIDYLKRRGLSGEVAARFGLGYAPDEWQALEKAF--PDYQAKTLA 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 DAG+++ N+QGR YDRFR R++FPI D+RGR+I FGGRVL PKYLNSPET +F KGR Sbjct: 176 DAGLVIDNEQGRRYDRFRNRIIFPIHDRRGRIIAFGGRVLDKGEPKYLNSPETPLFEKGR 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +LYGL+ AQ+ + +VVEGYMDVVALAQ+ I AVA+LGT+TT HI L R T+ Sbjct: 236 ELYGLFLAQKAIRDAGFAVVVEGYMDVVALAQFAIENAVATLGTATTPQHIHTLLRQTDR 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE AL + D L F+FLP DPD+ VR EG EAF Sbjct: 296 IVFCFDGDAAGRRAAWRALENALESLRDDATLAFLFLPAEHDPDSFVRAEGTEAFRKAAL 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A PL +FL L + L + +GRA A PL++++ L++ + + + G+ Sbjct: 356 AATPLGSFLIQELSGRHPLDSAEGRAAFVHEAAPLVTRIAAPLLKLQVVKAVAESAGMTQ 415 Query: 424 DSQLERLMPKAAESGVSR---------------------------------------PVP 444 AA + R P Sbjct: 416 GEVEYAFEQLAASAPRRRGASAPTPPRAPAASIASTEADAPFFDDAPPPARSAPPRGQAP 475 Query: 445 QLK-------RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQ-- 495 + + +T L+ L++Q+P A +P D++ P +++ C Sbjct: 476 RPRAGGRRKPPSTAGTLLRLVMQHPTWAARMPVGLVPDDS--PEGLALIAIIDLCSLGEP 533 Query: 496 -PGLTTGQLLEHYRGTNNAATLEKLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQE 552 P G L+E +R T +A TL +++ + D+ + E F D+L + + Sbjct: 534 IPSGGLGALIERFRETPHAETLSRVAAELVEAEFDEAVVETLFEDALRKLQIDGVGKEIT 593 Query: 553 ELIARERTHGLSNEERLELWTLNQE 577 L+ R+R GL R L L E Sbjct: 594 ALLQRDREQGLDAAGRHRLGELLLE 618 >UniRef50_D2LRD0 DNA primase n=2 Tax=Bacillus RepID=D2LRD0_BACS4 Length = 604 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 170/597 (28%), Positives = 272/597 (45%), Gaps = 26/597 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I ++ DIVD+I V+LKKQGKNF CPFH EKTPSF+V+ +KQ YHCFG Sbjct: 6 RVSEDIIEEIRKSIDIVDIISEYVQLKKQGKNFIGLCPFHGEKTPSFSVSPDKQLYHCFG 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN F+M + L F+E+V+++A N+ +P + T Sbjct: 66 CGAGGNVFSFIMETEGLPFLESVKKIADRMNMAIPELEHVTDEATSKEDSITKIWHNAHA 125 Query: 124 --NTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + L AR YL RG + EVI F IG+AP WD + Sbjct: 126 LSAKLFHHVLTSTDEGKEARDYLRNRGFTKEVIDTFQIGYAPNSWDFLASFLEKRKFPMD 185 Query: 181 SLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 ++ G+L + + YDRFR+R++FPI + +G +I FGGR+L PKYLNSPE+ IF Sbjct: 186 EMVKCGILSVREFDQKPYDRFRDRIIFPIWNNKGDMIAFGGRILSEGNPKYLNSPESSIF 245 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K LY ++A+ + N ++ EGY+DV++ + G++ VASLGT+ + ++L R Sbjct: 246 NKSETLYYFHKARPSIRKKNEAILFEGYVDVISAWKAGVDNGVASLGTALSTTQAKMLRR 305 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T++VI CYD D AG++A + G Q+R LPDG DPD ++K G + F Sbjct: 306 LTDHVILCYDSDNAGQNATMKNAAIL---SEAGLQVRVAILPDGMDPDDYIQKMGVDRFN 362 Query: 360 A-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + Q++ L F F +L R + +S++ R + + L + Sbjct: 363 KDVIGQSLTLMGFKFQYYRRGKNLKDDGERMTYIHQMIEEVSKLSHAVERDHYLRRLSEE 422 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRT---------------TMRILIGLLVQNPE 463 + ++ ++ + +S ++ + RILI +++N Sbjct: 423 FSLSLEALKQQQIQVYKQSKGKNEERKVVHSNFSKQQKRLLLAYENAERILIAHMLKNNS 482 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 +A V N + L + +E+ +L+M Sbjct: 483 VANQVQRKVGGAFNIDEYQAIAAHLFSYYADGFEPNPSSFIEYLEDDKLKRITSELAM-- 540 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + ++EQ D + + + L E+L R EE +E + E+ K Sbjct: 541 MTITEEMSEQELADYIKQIKNYPKRLEVEKLKVE-RKKLEEAEEYVEAAKIAMEIIK 596 >UniRef50_C9KNW9 DNA primase n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KNW9_9FIRM Length = 592 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 166/587 (28%), Positives = 275/587 (46%), Gaps = 17/587 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M F+ + +TDI+ ++ V LK++G + CCPFH EKT SF+V +K F++ Sbjct: 1 MRNEAMEAFVERVSEQTDILRIVQGYVPLKRRGNRYWGCCPFHQEKTASFSVLPDKGFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GNA FL + + + + ++ A + +P S + Q L ++ Sbjct: 61 CFGCHAGGNAFKFLSLIENISYFDAIKLQAEKLGIPLPERKRSPQEVARDREIQDLRKVN 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ L + + Y RG+ E I F +G+APP WD + F + Sbjct: 121 ELARDFFHNCLTMTRMGERGKAYFAARGIRQETIEEFQLGYAPPAWDKLSTAFLKRGIKQ 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + L+ +G+ QG YDRFR RV+ PI D+RGRV+GFGGRVL + TPKYLN+PET + Sbjct: 181 EFLLASGLCAERKQGGGLYDRFRGRVIIPIADERGRVVGFGGRVLDDSTPKYLNTPETVL 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K + L+GL + + + R +VVEGYMD +++ G++ VASLGT+ T +H + L Sbjct: 241 FNKRKLLFGLDRSHRAIQQEGRAIVVEGYMDAISVFDAGVHNVVASLGTAFTPEHAKKLL 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + CYD D AG+ A RAL G ++R + +PDG+DPD +RK G +AF Sbjct: 301 HYAPEICFCYDSDEAGQKATIRALSI---VRDTGARVRVIVVPDGKDPDEFIRKHGADAF 357 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A +E+A+PL + ++ + T DG+ + +P+++ + +R + L Sbjct: 358 RALVEKALPLVEYRLRYVLSHTNYDTLDGKVKALHEMMPVLAGIREAAVRSEYERRLAQT 417 Query: 419 LGILDDSQLERLM--PKAAESGVSRPVPQLK-------RTTMRILIGLLVQNPELATLVP 469 L + + L AE V +P+ + R R++I + Q+ + + Sbjct: 418 LMLDEGIVRSELRHYRPEAEEAVRQPIRKAVAKADTALRKAGRLVIRMAWQDAAVIAHLE 477 Query: 470 PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 + L+ + P + + A L D+ Sbjct: 478 TIVPLEGIRDPAQREILTFLKAAAEEGRPVDDMSAATLSDEAAAELSRSLVEDLGGRDET 537 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 + + DSL + + L E + + + + L LN+ Sbjct: 538 ---EAYDDSLRVLRKAYLNALYTEHSRKANEYAQNGQHEACLQELNE 581 >UniRef50_C0ZB91 DNA primase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZB91_BREBN Length = 624 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 180/609 (29%), Positives = 287/609 (47%), Gaps = 44/609 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G F+N + A DIVD++ V+L+K G+ F CPFH+EK+PSF VN E+QF+H Sbjct: 1 MTGPTSDEFVNQVRAAVDIVDVVGEYVQLRKSGRAFLGLCPFHSEKSPSFNVNAERQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA G+ FLM ++L F E + +LA + VP + E+ + + + Sbjct: 61 CFGCGAGGDIFSFLMKLEQLTFPEALHKLAERAGIAVP-QPQQVEESPEKRMKHVMQEAH 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ Y L + P A +YL KRG+S IA + IGFAP WD V ++ ++ Sbjct: 120 TFVSRLYHYVLTKTPYGAEAMKYLAKRGMSEATIAEYQIGFAPDSWDFVTQQLTKRGFSQ 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--------GNDTPKYL 231 + +++AG+L +D G+ +DRFR R+MFPI+D +G IGFGGR+L PKYL Sbjct: 180 ELMVEAGLLARSDAGKIFDRFRGRIMFPIQDSQGNAIGFGGRLLQGSKHNSNQKSQPKYL 239 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPE+ +F+K L+ L+ A+ + L+ EGY+DV++ Q G +A+LGT+ T Sbjct: 240 NSPESLLFNKSATLFNLHRARPIIRKRKEALLFEGYVDVISAWQAGFTQGIATLGTALTE 299 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 ++L R T +V+ CYDGD AG++A +A+ G +R LP G DPD +R Sbjct: 300 QQARILRRNTESVVLCYDGDAAGQEATSKAIHVLQQ---AGLIVRVAPLPQGVDPDDYIR 356 Query: 352 KEGKEAF-EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + G EAF + + QAMP++AF L Q + +ARL A+ +I+++ R Sbjct: 357 QHGAEAFSQQVLLQAMPITAFRLKHLRSQFVIKDETDKARLIAKAVEIINELGSPVERDM 416 Query: 411 LRQELGNKLGILDDSQLERLMPKAAESGVSRPV----------------------PQLKR 448 +++L + + + R P Sbjct: 417 YQRQLAEEYSLTLGDLKWESKRAYNQQKSERQRDKVTPAWNNSINNGKVTLAKTLPPAYH 476 Query: 449 TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR 508 T R+L+ +++N E+A V + L L G+ + + + Sbjct: 477 TAERMLLYYMMRNEEIAARVQQECSAHFQVDEHDALAAYLYAYYAEGNPEDPGKFIHYVQ 536 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER------THG 562 L+M + D ++E D + + + E L +R Sbjct: 537 DDLLKQLASGLAMMECNND--VSELEIGDYIKQVNNYPKRAELERLRDEQRSLHLQAAAA 594 Query: 563 LSNEERLEL 571 S + R +L Sbjct: 595 DSEDARKQL 603 >UniRef50_Q1GYU7 DNA primase n=2 Tax=Methylophilales RepID=Q1GYU7_METFK Length = 576 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 235/580 (40%), Positives = 320/580 (55%), Gaps = 16/580 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI +LL R DIVD+ID V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPDSFIQELLNRVDIVDVIDRSVPLKKAGANYSACCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+AI F+M Y + FVE V ELA + VP E + L ++M Sbjct: 61 CGAHGSAIGFVMEYQGISFVEAVHELAKSVGMIVPQE-SRPEDVVRAKVIPGLQEVMQQA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y+ L++ + A +YL+ RGLS +V RF IG+AP GW N+ F + L Sbjct: 120 ADYYRAELKK--SPRAIEYLKGRGLSGQVAGRFQIGYAPAGWQNLQAVFA--DYRHEVLQ 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHK 241 AG+++ N+QGR YDRFR+R+MFPI ++G+VIGFGGRVL + KYLNSPET +F K Sbjct: 176 TAGLVIENEQGRCYDRFRDRIMFPIHGQKGQVIGFGGRVLESADAGAKYLNSPETPLFQK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G++LYGL+ A++ E R LVVEGYMDVVALAQYGI+YAVA+LGT+TT HI L R T Sbjct: 236 GQELYGLFLARRAIREAGRALVVEGYMDVVALAQYGIDYAVAALGTATTPAHIAKLMRQT 295 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + ++ C+DGD AGR AAWRA ALP + DG +L F+FLP DPD+ VR+ GK+AFE Sbjct: 296 DEIVFCFDGDSAGRGAAWRAAMNALPVLKDGLRLSFLFLPAQHDPDSYVREFGKQAFEDL 355 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 M QAMPLS +L L L + + + + A P++ Q+ L + LR+ + I Sbjct: 356 MAQAMPLSQYLIQELSANNRLQSQEDKVQFLNEAEPILKQIQAPRLALLLRKRIAELADI 415 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKR---TTMRILIGLLVQNPELATLVPPLENLDENK 478 D + +R P+ R + R + + P L Sbjct: 416 SSDEMRRMVKLPETNRQQTRSAPKQARVTMSLQRRFTLMAIMRPHLVQEGDQQ--WMTGS 473 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN-IAEQTFTD 537 + R++V L P +L NA L L + D++ E F Sbjct: 474 TDEDEMVRQVVKLALESPDAKPVAILHGLESVVNARLLPDLQRDLHLLDESLDFELEFDG 533 Query: 538 SLNHMFDSLLELRQEELIARERT---HGLSNEERLELWTL 574 + D L+ ++ + R + L+ EER L ++ Sbjct: 534 VRRQLKDMYLQRQKASAVDRLKEKNLSQLTEEERELLKSI 573 >UniRef50_P05096 DNA primase n=19 Tax=Bacillaceae RepID=PRIM_BACSU Length = 603 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 164/569 (28%), Positives = 263/569 (46%), Gaps = 28/569 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP ++ + DIV++I V+LKKQG+N+ CPFH E TPSF+V+ +KQ +H Sbjct: 1 MGNRIPDEIVDQVQKSADIVEVIGDYVQLKKQGRNYFGLCPFHGESTPSFSVSPDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE-AGSGPSQIERHQRQTLYQL 119 CFGCGA GN FL + F E+V LA + ++ P + ++ E Q + + Sbjct: 61 CFGCGAGGNVFSFLRQMEGYSFAESVSHLADKYQIDFPDDITVHSGARPESSGEQKMAEA 120 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + L FY L A YL RG + E+I F IG+A WD + K + Sbjct: 121 HELLKKFYHHLLINTKEGQEALDYLLSRGFTKELINEFQIGYALDSWDFITKFLVKRGFS 180 Query: 179 RQSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + AG+L+ + G Y DRFR RVMFPI D G V+ F GR LG+ PKY+NSPET Sbjct: 181 EAQMEKAGLLIRREDGSGYFDRFRNRVMFPIHDHHGAVVAFSGRALGSQQPKYMNSPETP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHK + LY Y+A+ + R ++ EG+ DV++ + ++A++GTS T DH+++L Sbjct: 241 LFHKSKLLYNFYKARLHIRKQERAVLFEGFADVISAVSSDVKESIATMGTSLTDDHVKIL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R +I CYD D+AG +A +A E G ++R +PDG DPD ++K G E Sbjct: 301 RRNVEEIILCYDSDKAGYEATLKASELLQK---KGCKVRVAMIPDGLDPDDYIKKFGGEK 357 Query: 358 FE-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+ ++ ++ + AF +LS R L IS + G + ++L Sbjct: 358 FKNDIIDASVTVMAFKMQYFRKGKNLSDEGDRLAYIKDVLKEISTLSGSLEQEVYVKQLA 417 Query: 417 NKLGILDDSQLERL-------------------MPKAAESGVSRPVPQLKRTTMRILIGL 457 ++ + +S E+L + + R+L+ Sbjct: 418 SEFSLSQESLTEQLSVFSKQNKPADNSGETKTRRAHLTTKARQKRLRPAYENAERLLLAH 477 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 ++++ + V N L L LT L+ + + L Sbjct: 478 MLRDRSVIKKVIDRVGFQFNIDEHRALAAYLYAFYEEGAELTPQHLMARVTDDHISQLLS 537 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSL 546 + M ++ ++E +D + + + Sbjct: 538 DILM--LQVNQELSEAELSDYVKKVLNQR 564 >UniRef50_C4ZEX1 DNA primase n=3 Tax=Clostridiales RepID=C4ZEX1_EUBR3 Length = 590 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 169/588 (28%), Positives = 284/588 (48%), Gaps = 22/588 (3%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 I ++ +R DIVD+I + V L+K+G + CPFHNEKT SF+V+ KQ Y+CFGCG Sbjct: 5 SDELIEEVRSRNDIVDVIGSYVHLQKKGSTYFGLCPFHNEKTGSFSVSPNKQMYYCFGCG 64 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN FLM Y+ F E ++ELA +E+P + + + E +R L ++ Sbjct: 65 AGGNVFTFLMQYENFTFPEAMQELADRVGIELPKQEMTSAQRREADRRTQLLEINKEAAK 124 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++ L+ P A +Y +KR LS E + +F +G++ D++ K + + L + Sbjct: 125 YFYMLLRGPRGQRAHEYFKKRELSDETMQKFGLGYSDQYSDDLYKYLRSKGYDDEILKET 184 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++ ++ +D+F R MFPI D RVIGFGGRV+G+ PKYLNSPET IF K R L Sbjct: 185 GLVTIDEVRGGHDKFWNRAMFPIMDVHNRVIGFGGRVMGDGEPKYLNSPETKIFDKSRNL 244 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL A+ N+LL+ EGYMDV+AL Q G + AVASLGT+ T+ H LL R TN V Sbjct: 245 YGLNIARST--RKNQLLLCEGYMDVIALHQAGFDNAVASLGTALTSGHASLLKRYTNEVY 302 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG AA RA+ G + + + +DPD ++ G + +E R+++A Sbjct: 303 LTYDSDGAGVKAALRAIPILKEV---GITTKVINMRPYKDPDEFIKALGAQEYEERIKKA 359 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 F + D+ P+ + + E R Q + + I D Sbjct: 360 ENSFMFQIRIMQAGYDMDDPESKTAFYNEIAKKLLGFTEELERTNYTQAVSREYSIPYDD 419 Query: 426 QLERLMPKAAESGVSRPVPQLK-------------RTTMRILIGLLVQNPELATLVPPLE 472 + + A + G+ +P +LK + + ++L+ L+++ L + Sbjct: 420 LRKLVNSMAMKGGIVKPQTKLKSGINEKNKKEDGMKQSQKLLLTWLIEDNSLFDRIKGRI 479 Query: 473 NLDENKLP-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL--SMWDDIADKN 529 + D+ + +E+ + + + +++ + + + L + + KN Sbjct: 480 SADDFTEELYHKVAKEVFSQYETTHTVNPARIVSMFTDEDEQREVAGLFNATIHQVEGKN 539 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS-NEERLELWTLNQ 576 +++ + + ++ R + L + + E++ L L + Sbjct: 540 DKATALRETVVRIKQNSIDYRSKHLAPTDMEGMMRIIEDKRALEELQK 587 >UniRef50_Q474B7 DNA primase n=8 Tax=Burkholderiales RepID=Q474B7_RALEJ Length = 604 Score = 530 bits (1366), Expect = e-149, Method: Composition-based stats. Identities = 236/602 (39%), Positives = 330/602 (54%), Gaps = 26/602 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQT---LYQLM 120 CGAHG+AI FLM Y + E V ELA + VP E P Q+ L M Sbjct: 61 CGAHGSAIGFLMEYSGQSYPEAVRELAQSVGMSVPEERDRLPPGQRAEQQARSVALSDAM 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG--GNPEN 178 FY++ L+ A A QYL+ RGL+ E+ A+F +G+AP W + FG + Sbjct: 121 SRATEFYRRQLRG--APQAIQYLKGRGLTGEIAAQFGLGYAPDDWQGLEAVFGSYRDDTI 178 Query: 179 RQSLIDAGMLVTND-------QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYL 231 L++AG+L+ + + R YDRFR+R+MFPIR+ +G VIGFGGRV+G PKYL Sbjct: 179 AAPLVEAGLLIESSEKRDADGKPRRYDRFRDRIMFPIRNTKGAVIGFGGRVIGQGEPKYL 238 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPET +F KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+LGT+ T Sbjct: 239 NSPETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACTP 298 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 H+Q L R T++V+ +DGD AGR AA RALE LP++ D + +RF+FLP DPD+ VR Sbjct: 299 VHVQKLLRQTDSVVFSFDGDAAGRRAARRALEACLPHVADNKAIRFLFLPAEHDPDSYVR 358 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +EG EAF A++ AMPLS FL ++ + D+ P+GRAR A PL+ +P LR+ + Sbjct: 359 EEGTEAFAAQVRDAMPLSRFLLQAVTEEQDMRQPEGRARAQYEAKPLLQAMPACGLRLQI 418 Query: 412 RQELGNKLGILDDSQLE--RLMPKAAESGV-SRPVPQLKRTT----MRILIGLLVQNPEL 464 +EL + G L A +G ++P P+ KR + ++ LL+ P L Sbjct: 419 IRELADATGTTPAEIEAICGLRSDPARAGRFAQPRPRAKRQAPTGLEQRVLQLLMCYPSL 478 Query: 465 ATLVPP--LENLDENKLPGLGLFRELVNTCLS-QPGLTTGQLLEHYRGTNNAA--TLEKL 519 A + L + + + LV C + + EH + A + Sbjct: 479 AARLDEDSRALLLDPEGADAEVLAHLVAACDEVEGQVNFAAFSEHLAQSPYAEMYAAART 538 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 ++ + ++ A Q F ++ + L E L A + + + L E+ Sbjct: 539 AVLREEIEEEPATQEFDAAVTKLLAEPLSRELERLQAAVIAGTADEDGKQRMRWLVGEIH 598 Query: 580 KK 581 ++ Sbjct: 599 RR 600 >UniRef50_Q47IP7 DNA primase n=2 Tax=Betaproteobacteria RepID=Q47IP7_DECAR Length = 578 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 230/575 (40%), Positives = 329/575 (57%), Gaps = 11/575 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI DLLAR DIVDL+D V LKK G N+ ACCPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPDSFIQDLLARVDIVDLVDGYVPLKKAGANYAACCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG AI F+M Y L FV+ V++LA ++VP G + Q +TL ++M Sbjct: 61 CGAHGTAISFVMEYQGLGFVDAVKDLATRAGMQVPESEGRSFKDEKPGQTRTLIEIMARA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y+ L++ + A +Y +KRGL+ E+ AR+ IG+AP GW N+ + F N L Sbjct: 121 AAYYKDQLKK--SPHAIEYCKKRGLTGEIAARYGIGYAPDGWQNLQEVF--PDYNADELK 176 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+++ N+ GR YDRFR+R+M PI + +G +I FGGR++ PKYLNSPET +F KGR Sbjct: 177 IAGLVIENEAGRRYDRFRDRLMIPIINPKGEIIAFGGRIIDQGEPKYLNSPETPLFEKGR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +L+GL +A+Q E + +V EGYMDV+ALAQ G+ AVA+LGT+TTA H+ L R + Sbjct: 237 ELFGLPQARQALRETDTAIVTEGYMDVIALAQNGVGNAVATLGTATTATHVTKLLRQVDR 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRALE +L + D ++L F+FLP DPD+ +R+ GKE F+ ++ Sbjct: 297 IVFCFDGDNAGRKAAWRALENSLEALADNKRLGFIFLPQEHDPDSYIREFGKEQFDRQVT 356 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QAMPLS FL L + DL++ +G+A+L A PL+ ++P LR+ L + L G Sbjct: 357 QAMPLSDFLLRELAQRCDLTSSEGKAQLIYEAKPLLLKLPTPLLRLQLVKRLAEASGFAQ 416 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLG 483 K+ + + R L+ +++ P+LA +P D + L Sbjct: 417 AEVERLCELKSYTPAAPPKAKRTAPSLTRNLLRIVLHKPQLAAQLPIALLPDTPERAALT 476 Query: 484 LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD--DIADKNIAEQTFTDSLNH 541 +LV + L E RG + +E + D+ AE F D+L Sbjct: 477 RLHQLVTANRETS--SYAGLREQLRGLPEESVIENAASELLGLPFDEEGAEMEFRDTLEK 534 Query: 542 MFDSLLELRQEELIARERT---HGLSNEERLELWT 573 + + + EL + + GLS E+ Sbjct: 535 LQEGGEKRAFAELQVKAQQFGVAGLSAAEKQAYIQ 569 >UniRef50_Q67RX1 DNA primase n=1 Tax=Symbiobacterium thermophilum RepID=Q67RX1_SYMTH Length = 623 Score = 529 bits (1364), Expect = e-149, Method: Composition-based stats. Identities = 185/627 (29%), Positives = 285/627 (45%), Gaps = 56/627 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R + F +++ AR DIV++I A VKL+++G + CPFH+EKTPSF V + QFY+ Sbjct: 1 MA-RFDQAFKDEVRARNDIVEVISAYVKLERRGNRYVGLCPFHSEKTPSFHVVPDGQFYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ FLM + L F E + +LA + +P E + + +R+ +Y + Sbjct: 60 CFGCKASGDVFTFLMEREHLTFYEALVQLAQRARIPLPQEERTPEEERAYRERRDMYAAL 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D FY L P YL RGL+ E I RF +G+AP G + + Q Sbjct: 120 DLAARFYHHQLFTPAGKPGLDYLLGRGLTEETIRRFRLGWAP-GRGALFRALRDR-FPPQ 177 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG++V G + D F ERVMFPI D GRVIGFGGR+LG + KY N+ ET +F Sbjct: 178 ILQKAGLIVPRRDGPGFMDVFFERVMFPIADLSGRVIGFGGRILGGEGAKYKNTAETPLF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K L+GL +A++ N+ ++VEGYMDV+ Q GI VA LGT+ T + ++++ + Sbjct: 238 VKRHVLFGLDQAKEAMRARNQAILVEGYMDVLMPHQAGIQNVVAPLGTALTDEQVRIIRQ 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 VI +D D AG+ A R G +R + LPDG+DPD +R G AF Sbjct: 298 QAQQVIVAFDMDTAGQLATLRG---LQKLYDSGCDVRVLQLPDGKDPDEFIRTHGAPAFV 354 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK- 418 R+EQA+PL F + +P TP+ A+ +++ V E +R ++ ++ Sbjct: 355 ERIEQALPLIEFRLSLALPATRRPTPEEMAKAVESVAQVLADVRNEVVREAYVDQVADRL 414 Query: 419 ----------LGILDDSQLERLMPK------------------AAESGVSRPVPQL---- 446 L + D Q+ RL+ + A G +RP P Sbjct: 415 AGDNPLAKPDLKLAIDRQMNRLLRRGFQHNLPDSRNNRRGPGAPASPGPTRPRPDQAPVT 474 Query: 447 ----KRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGL---- 498 R R+L+ LL+++P L V + P L++ Sbjct: 475 QAEGARRAERVLLYLLLEHPGLLRTVEAELGEEPFSDPHHRQIYRAGRALLAEADPLAGG 534 Query: 499 -TTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR 557 +L + L ++++ + E+ D + + R E+L + Sbjct: 535 GVIARLFDRLSDPEARQVLTEMAVTPMLTSDP--EKEAADCIEKIRKHRDSRRLEDLENQ 592 Query: 558 ERTHGL-----SNEERLELWTLNQELA 579 + E L ++L Sbjct: 593 IKAAAAASRRVDPAIWNEYMALVRKLK 619 >UniRef50_B6J438 DNA primase n=6 Tax=Coxiella burnetii RepID=B6J438_COXB2 Length = 572 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 225/566 (39%), Positives = 331/566 (58%), Gaps = 14/566 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ FI DLL+RTDIV+LI +RV +KK+G N+ CPFH EKTPSFTV+ KQFY+ Sbjct: 20 MNKRIPQSFIQDLLSRTDIVELIQSRVAIKKRGANYLGLCPFHTEKTPSFTVSSSKQFYY 79 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAI FLM +D++EF+E V +LA +E+P E E + + L+ Sbjct: 80 CFGCAAHGNAISFLMAFDRMEFLEAVTDLANQLGIEIPHETIGQSKTAEINDD---FVLL 136 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ FYQ+ L++ + +A YL+ RGL+ E +FAIG+AP W+N+ + + Sbjct: 137 TTISRFYQRELKR--SPTAIHYLKSRGLTGETAKQFAIGYAPNAWENLRPFAKNSK-TQS 193 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ G+LV + R +DRFR R+MFPIRD RGRVI FGGR +G D PKY+NSPET +F Sbjct: 194 QLVTHGLLVKKEN-RCFDRFRHRIMFPIRDVRGRVIAFGGRSVGEDLPKYMNSPETPLFQ 252 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG +LYGL+EA + + R L+VEGYMDVV+L Q+GI YAVA+LGT+T+ H+Q L R Sbjct: 253 KGNELYGLHEACKTHRPLPRALIVEGYMDVVSLHQHGITYAVATLGTATSVRHLQKLLRY 312 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+ +I C+DGD AGR AAWRAL +ALP M +G +RF+FLP GEDPD+L++K G+EAFE Sbjct: 313 THEIIYCFDGDDAGRQAAWRALTSALPVMREGIHIRFLFLPQGEDPDSLIQKIGREAFEN 372 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +++QA PLS F+ L ++ + + D +A + AL + +P L +EL +L Sbjct: 373 KIDQAPPLSEVFFSHLQKEIPIRSIDDKAAFAKQALEHLRPMPRGIFYQLLLEELAQRLT 432 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 + L L + + +L Q P L +++ + ++ P Sbjct: 433 LD----LSELDSLTVAPPPMPAASTRVPSLAYHALSILAQAPSLVSVIQDMTIPK-SEDP 487 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLN 540 + ++V +P TG+LL + + L +L+ + ++ D++N Sbjct: 488 QIQFLAKMVLFLKKRPVANTGELLA-FCPESQRRLLAQLAAYKTGLSEDDLAAELKDAIN 546 Query: 541 HMFDSLLELRQ-EELIARERTHGLSN 565 + + + + LI L Sbjct: 547 RLHEQHQKEEAFQALIKASHKETLEE 572 >UniRef50_B0K885 DNA primase n=7 Tax=Thermoanaerobacter RepID=B0K885_THEP3 Length = 595 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 174/592 (29%), Positives = 267/592 (45%), Gaps = 26/592 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA + I ++ DI+D+I V+LKK GK F CPFH EKTPSF V+ EKQ YH Sbjct: 1 MA--YSKEMIEKVIEANDIIDVISEYVELKKAGKEFKGLCPFHREKTPSFMVSQEKQVYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GN + F+M+ + L F E +E LA + + + + +Y++ Sbjct: 59 CFGCNASGNVVTFIMDIENLTFKEAIEFLADRVGITLEETVLTEREYQRKKLIDEIYKVN 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ L A Y+ KRGL+ I +F IG++ P + +L Sbjct: 119 KLATMYFYNKLFSEEGRQALTYIRKRGLTEATIKKFGIGYSSPHGNGLLNFLKEKGYTES 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ AG+L R YDRFR RVMFPI D +G VIGFGGR + + PKYLN+PET++F Sbjct: 179 FLVKAGLLSQ-KNNRYYDRFRNRVMFPIIDVKGNVIGFGGRSIDDSLPKYLNTPETEVFK 237 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ L+ + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R Sbjct: 238 KGKTLFAINFAKKT--QQDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRY 295 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 NV+ YD D AG AA R L+ ++ + +P G+DPD ++KEG AF Sbjct: 296 KGNVVIAYDADEAGISAALRGLDILDELN---LNIKVLTIPYGKDPDEFIKKEGVNAFNQ 352 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +E A L F +DL P R I+++ E R Sbjct: 353 LIENADSLIEFKAKVFRKNLDLDNPQDRIIYVKKIAKDIAKLSDEVKREVYISSAAKVAQ 412 Query: 421 ILDDSQLERLMPKAAESGVSRPV-------------PQLKRTTMRILIGLLVQNPELATL 467 I +++ + K + + LI LL+ + L Sbjct: 413 IPENAVRTEVARFVNREIEKNQKNMYMAGNIRHNIYSSSKISPEKYLIALLLYDNNLYKR 472 Query: 468 VPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 V D + +F E+++ ++ + N + + + Sbjct: 473 VKETITADMLENVKLKPIFGEIMSRLEDGKKTQINDIVYLLQEENLISDFNDI-IKAFYE 531 Query: 527 DKNIAEQTFTDSLNHMFDSLL---ELRQEELIARERTHGLSNEERLELWTLN 575 +N+ EQ D +N + + L + + I G +ER L L Sbjct: 532 SENVTEQAVDDIINKILINSLAVKREKIKRAINEAHMLGDIEKERQLLIELQ 583 >UniRef50_D1BNB9 DNA primase n=3 Tax=Veillonella RepID=D1BNB9_VEIPT Length = 590 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 186/595 (31%), Positives = 287/595 (48%), Gaps = 20/595 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ I + DIV ++ V LKK+GKN+ CCPFHNEKTPSF+V EK FY+ Sbjct: 1 MSRYFENELIEQIKDANDIVSVVSEHVALKKRGKNYWGCCPFHNEKTPSFSVAPEKGFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GNAI FLM + L FVE +E LA N+ +P S + +R+ LY+ Sbjct: 61 CFGCHASGNAIKFLMELEHLTFVEALERLANRANIPLPEAKLSPEQRARDERRKKLYEAS 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D TF+ L Q + YL+KRGL+ I F +GFAP GWD + + F + Sbjct: 121 DLAATFFHNCLTQTSIGKVGLDYLKKRGLTQATIETFKLGFAPDGWDKLYRAFHDRGIDD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L++ ++ N +G+ YD FR R+MFPI D +GRV+ FGGRV+ + TPKYLNSPE+ IF Sbjct: 181 SILLELNLVRKNQKGQFYDFFRNRIMFPIMDGKGRVVAFGGRVMDDSTPKYLNSPESSIF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ L+ +A + E + ++VEGYMDV++ +G+ VASLGT+ T DH +L R Sbjct: 241 EKGKLLFAFDKAYKSIREEKQAILVEGYMDVISAHNHGVTNVVASLGTAYTRDHGHILMR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++ YD D AGR AA RA+E ++R + +PDG+DPD VR G +AF+ Sbjct: 301 QAEEIVLAYDMDGAGRQAAARAIELLQ---NTDFKVRVLAMPDGKDPDDYVRNHGGQAFK 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + +A+ +L + + + D + +G+ + P I+ + +T R + L L Sbjct: 358 ELVAKAVKPLDYLLSESLIKHDTNDTEGKQAVMADVFPYIANIDSQTQRDDALKTLALPL 417 Query: 420 GILDDSQLERLMPKAAE--------SGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 + + + + + P L + L+ L + E+ + Sbjct: 418 WLDNSTIFRYFRDYVKKGQIELVDTASTPLPTQDLPKGDAEKLLSLAFTDGEVLQHMMSY 477 Query: 472 ENL-DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 L D K+ G+ +L S+ L + + M DD + Sbjct: 478 LPLEDFEKIEYRGIIEKLFTLYKSEGRLDETAIQSVLSSQEYDIYSRLVVMSDDEYKVQV 537 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN-----EERLELWTLNQELAK 580 L+ + + + + + G S + E+ L +E +K Sbjct: 538 PALIRKIRLHSLREQYKAHSI--MADQLKRAGDSTFISELHKCQEIQNLIREWSK 590 >UniRef50_B0TG56 DNA primase n=2 Tax=Heliobacteriaceae RepID=B0TG56_HELMI Length = 656 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 181/635 (28%), Positives = 286/635 (45%), Gaps = 67/635 (10%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 ++++ R DIV+++ V LK+QG + CPFH+EKTPSFTV+ +KQ++HCFGCG Sbjct: 3 DPQIVDEIRHRLDIVEIVADYVALKRQGGRYVGLCPFHSEKTPSFTVSRDKQYFHCFGCG 62 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+M + L F E +++LA + +P + Q +R + L Sbjct: 63 TGGDVFTFVMLRENLTFPEALKKLAERAGVTLPERKLTPTQQAQRTAVERGRALHKRAAE 122 Query: 126 FYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 Y + L++ A R+YL +RG+S V F +GFAPPGW+ + R + L Sbjct: 123 LYFRCLREDARARPGREYLSRRGVSDSVAVDFGLGFAPPGWEFLATRLQQEGYLPEELER 182 Query: 185 AGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G++V G YDRFR R++FPI D +GR + FGGRVL + PKYLNSPET ++ KG+ Sbjct: 183 FGLIVPRQGGEGYYDRFRNRIIFPIFDAQGRPVAFGGRVLDDAVPKYLNSPETPLYKKGQ 242 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL +A E ++VEGYMDV+A Q+GI AVASLGT+ T + +LL R Sbjct: 243 HLYGLNKAGSAIREKGVAVLVEGYMDVIACHQHGIRQAVASLGTAMTPEQGRLLLRYGPR 302 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ CYD DRAG +AA +A G Q++ + LP+G+DPD +++ G ++F E Sbjct: 303 VLICYDSDRAGVEAAVKAGGILTAL---GAQIQVLTLPEGKDPDEYLQRHGADSFWLAAE 359 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA F ++ DLS+ G+A + L+ +P + Q L +L + + Sbjct: 360 QAPSFFTFCYSRAAAAQDLSSAVGKASVVRELASLLLTMPSAVEQEANIQWLARELRLSE 419 Query: 424 DSQLERLMPKAAESG--------------------------------------------- 438 + +E + A + Sbjct: 420 AAVMEEIRGYARNARAPGMRKENIRHTISASAPAWGDGDAGTQAAPGDAGAADGLTARSA 479 Query: 439 ----VSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN--KLPGLGLFRELVNTC 492 + K R L+ ++++P+ V + P + L C Sbjct: 480 GGGEQRQHSANRKEQAWRYLLYWMIEDPDRVRWVFERLGEEIPRADEPLGEILAALTAVC 539 Query: 493 LSQPGLTTG-QLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQ 551 + ++ E L L + D + + + E D +N + L Sbjct: 540 DEGGRGSLAGRVAERLSTDKAKGYLSALLVEDILCREPVIE----DCINTLRYGWLTEEI 595 Query: 552 EELIAR----ERTHGLSNEERL--ELWTLNQELAK 580 L ++ R+ + +RL L L Q + Sbjct: 596 ASLESQVDAFSRSGDMEAMQRLLPRLAKLQQARNR 630 >UniRef50_Q0VMT8 DNA primase n=2 Tax=Alcanivorax RepID=Q0VMT8_ALCBS Length = 652 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 230/431 (53%), Positives = 297/431 (68%), Gaps = 4/431 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP F+ DLLARTD+V+LIDARV LKK G+N+ ACCPFH EKTPSFTV +KQFY+ Sbjct: 1 MA-RIPENFVQDLLARTDLVELIDARVPLKKTGRNYSACCPFHQEKTPSFTVAPDKQFYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR-QTLYQL 119 CFGCGA GNA FLM Y+ L F E V++LA +EVP + ++ R Q+LY L Sbjct: 60 CFGCGASGNAAGFLMEYEHLNFPEAVKQLADRAGMEVPESRPETTADRQKKDRLQSLYDL 119 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FY Q L+Q P A YL+ RGLS E+ +FAIGFAPPG+DN++ + Sbjct: 120 LSRAEKFYVQQLRQAPERQKAVNYLKNRGLSGEIAKQFAIGFAPPGYDNLINGLSLTETS 179 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + + G+LV + R+YD+FR+R++FPIRD RGR IGFGGRVLG+ PKYLNSPET Sbjct: 180 LEQAVTGGLLVRREDNNRTYDKFRDRIIFPIRDSRGRTIGFGGRVLGDGKPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +FHKG++LYGL+E +Q +RL VVEGYMDV+AL Q+G+ VA+LGT+TT DH + L Sbjct: 240 VFHKGQELYGLWEWRQSRDRSDRLYVVEGYMDVIALTQHGVPNVVATLGTATTEDHARKL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 FR N VI C+DGD+AG AAWRALE+ LP + DG+Q+RF+FLPDGEDPDTLVR++G EA Sbjct: 300 FRQVNEVILCFDGDKAGVRAAWRALESLLPALDDGKQVRFLFLPDGEDPDTLVRQQGPEA 359 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 A ++A LS +LF L +DL T DGR RL+ LALP + + G R L +EL Sbjct: 360 LRALTDKADALSTYLFRHLSEGLDLETVDGRVRLARLALPYLDKPAGPVYRALLTEELSR 419 Query: 418 KLGILDDSQLE 428 + +S ++ Sbjct: 420 LTRLDKESLIQ 430 >UniRef50_C4Z4Y5 DNA primase n=8 Tax=Firmicutes RepID=C4Z4Y5_EUBE2 Length = 587 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 170/595 (28%), Positives = 280/595 (47%), Gaps = 28/595 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R I+++++R DIVD+I VKLKK G ++ CPFHNEK+PSF+V+G++Q YHCFG Sbjct: 1 MYSREVIDEVISRNDIVDVISGYVKLKKNGSSYTGLCPFHNEKSPSFSVSGQRQLYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN I F+M Y+ + F+E V+ L + +P + S + ER R L ++ Sbjct: 61 CGAGGNVITFVMEYENMTFLEAVKMLGERAGVALPQTSMSEEDRKERGIRDRLLEINKIA 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 T+Y + L+ + YL+KR LS I F +G+A N+ K + L Sbjct: 121 ATYYYRQLRSENGKAGLDYLKKRELSDSTINSFGLGYATQSTGNLYKLLKDKGYDDDILK 180 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 ++G+ T ++G +++F RV+FPI D +VIGFGGRV+G+ PKYLNSPET +F K R Sbjct: 181 ESGLF-TYERG-IHEKFWNRVIFPIMDINNKVIGFGGRVMGDAKPKYLNSPETRLFDKSR 238 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ +++ EGYMDV+++ Q G N AVASLGT+ T H +LL R T+N Sbjct: 239 NLYGLNIARTS--RKPNMIICEGYMDVISMHQAGFNQAVASLGTALTPGHARLLKRYTDN 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ YD D AG AA RA+ G + + + +DPD ++ G EAF+ R++ Sbjct: 297 VLITYDSDEAGVKAALRAIPIL---KEAGLSTKVINMRPYKDPDEFIKAMGAEAFQERID 353 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A + +++ D P+ + + R + + + I + Sbjct: 354 NAENSFMYEIGTMLRNYDRGDPESETAFEREVAAKLVTFKEKLERDNYLKAVCRQFMIPE 413 Query: 424 DSQLERLMPKAAESG------------------VSRPVPQLKRTTMRILIGLLVQNPELA 465 D + + + G + R ++L+ L+ + ++ Sbjct: 414 DGMRQMVSRLGNQEGIISRNAGAGTPQPTVERKPKKKREDGLRQAEKMLLTWLISDRDIF 473 Query: 466 TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 V ++ P E V ++ ++ Y T + + D Sbjct: 474 DKVAGYIKPEDFIDPLFSGVAEKVYEQYGTGNISPAAIIADYATTEEHTEVAAMFSADLD 533 Query: 526 ADKNIAEQT--FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 N E+ D + + + L + + +R + E+ +L ++ +L Sbjct: 534 ESLNNLEREKTLNDIVIRIKANSLNHELNKTVDPKRMQEIIIEQ-QKLNQIHIKL 587 >UniRef50_Q1BLZ2 DNA primase n=77 Tax=Bacteria RepID=Q1BLZ2_BURCA Length = 800 Score = 526 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 246/619 (39%), Positives = 342/619 (55%), Gaps = 49/619 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP F+ DLL R DIVD++ V+LKK G NF CPFHNEK+PSFTV+ KQFYHCFGC Sbjct: 177 IPHSFLQDLLNRVDIVDVVGRYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 236 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG------------SGPSQIERHQ 112 GAHG AI FLM + L F E V+ELA L VP E P+ + + Sbjct: 237 GAHGTAIGFLMEHAGLTFPEAVQELAQSVGLTVPHEPSMRGGGGGGGGGGDYPAPVSKSV 296 Query: 113 RQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF 172 L M +Y++ L+ AT A QYL+ RGL+ E+ ARF +G+AP GW N+ F Sbjct: 297 ATALSDAMTAACDYYRKQLRG--ATVAIQYLKNRGLTGEIAARFGLGYAPDGWQNLEAAF 354 Query: 173 GGNPENRQSLIDAGMLVTNDQG------RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND 226 +SL++AG+++ +++ R YDRFRER+MFPIR+ +G+VIGFGGRVLG+ Sbjct: 355 --PDYRDESLVEAGLVIVSEKTDAQGVARRYDRFRERIMFPIRNVKGQVIGFGGRVLGSG 412 Query: 227 TPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLG 286 PKYLNSPET +F+KG +LYGL+EA+ E +LVVEGYMDVVALAQ G AVA+LG Sbjct: 413 EPKYLNSPETPLFNKGSELYGLFEARLAIRERKYVLVVEGYMDVVALAQLGFPNAVATLG 472 Query: 287 TSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDP 346 T+ T H+Q L R T+ VI +DGD AGR AA RALE LP+ D R +RF+FLP DP Sbjct: 473 TACTPIHVQKLLRQTDTVIFSFDGDSAGRRAARRALEACLPHAGDNRTIRFLFLPTEHDP 532 Query: 347 DTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 D+ VR+ G EAF ++E+AMPLS FL N + L P+GRA+ A PL+ +P Sbjct: 533 DSYVREFGAEAFSEQVERAMPLSQFLLNEAIAGKALDQPEGRAKALFDAKPLLQALPANA 592 Query: 407 LRIYLRQELGNKLGILDDSQ--LERLMPKAAESGVSRPVPQLKRT---TMRILIGLLVQN 461 LR + ++L I + L + + A P +R + + + LV + Sbjct: 593 LRAQIMHMFADRLDIPFEEVAALSDVDTRIATPPRQAPARSERRRVTDSEKRALRTLVMH 652 Query: 462 PELATLVPPLENLDENKLPGL-GLFRELVNTCLSQPGLTTGQLLEH-YRGTNNAATLEKL 519 P +A+ + + LP + LF E+V+ + +LL R ++N AT E++ Sbjct: 653 PRIASQLDDEQIATLRALPRIGELFAEVVDHARALGDGAEFRLLSDVLRTSSNGATYEEI 712 Query: 520 SMWDDIADKNIAEQTFTD----------------SLNHMFDSLLELRQ----EELIARER 559 D+N+ + + + + ++L++R + L R Sbjct: 713 FREILDYDENVRDLLLQNPEDETVPERQREQERIAGEELQAAVLKMRYDACCDRLDRLAR 772 Query: 560 THGLSNEERLELWTLNQEL 578 + EE EL LNQ+ Sbjct: 773 QSTFTPEELAELTELNQQR 791 >UniRef50_B2A1Z2 DNA primase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A1Z2_NATTJ Length = 626 Score = 526 bits (1355), Expect = e-148, Method: Composition-based stats. Identities = 176/613 (28%), Positives = 281/613 (45%), Gaps = 38/613 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP+ I + A D+V++ V LKKQGK + CPFH+EKTPSF ++ EKQ Y+ Sbjct: 1 MTIRIPQEIIERIQAEADLVEIASRYVNLKKQGKYYWGLCPFHSEKTPSFHISPEKQLYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS-QIERHQRQTLYQL 119 CFGC A GN FL + ++L FVE ++L +E+P ++ E +R+ + + Sbjct: 61 CFGCQAGGNVFKFLESIEQLNFVEVCQKLGEELGIELPADSQDSQELSQEMQEREIIKKA 120 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 F++ L S R+YL R + + +A F IG+AP W + Sbjct: 121 NKYAANFFRYVLMNTETGKSGRKYLADRKIDKQTMADFFIGYAPDNWTGLSDFLKKKGFT 180 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPE 235 + L+ AG+ + YDRFR RV+FPI ++RG VIGFGGR+L PKYLNSPE Sbjct: 181 EELLVKAGLSNRRKYREGVYDRFRGRVIFPIYNQRGEVIGFGGRLLEESEKQPKYLNSPE 240 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F+K LYGL A + + N LV+EGY DV+ Q+G+N AVASLGTS T + + Sbjct: 241 TPVFNKRLSLYGLNLAFKTIRKENHALVMEGYTDVITAHQFGVNTAVASLGTSLTEEQAK 300 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L+ + +D D AG A R LE + G + LP+ DPD ++ G Sbjct: 301 LIRNNASKAYIAFDADAAGETATLRGLEILQ---SKGLDVLICQLPESYDPDEYLKNYGL 357 Query: 356 EAFE-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F+ ++ A+PL+ + +LST +G+ + T +P+IS++ R + Sbjct: 358 ENFQKKILDTALPLTEYQIRQAAKNKNLSTIEGKKQYVTEIIPIISKIDNAVEREEYLNQ 417 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSRP---------------------------VPQLK 447 + +LGI ++ LM ++ ++ + Sbjct: 418 VSEQLGISQEALNSELMKYFRKNYRNKNYRKMDKTGVNRKNKRKNNGSETVKFADKRTPR 477 Query: 448 RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP-GLTTGQLLEH 506 L+ L++ PE V ++ L L + + L L + Sbjct: 478 EKAEEGLVALMLHFPEYTEEVNKFLYPEDFSSDTLALIVHKLYQLKNHDIELDLSNLTQE 537 Query: 507 YRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 R +A + D E+ D + + +S ++ ++EEL +E + + Sbjct: 538 LRDHPDAENIITKLGMKDFPQPKDIEKFVKDCVFRIKESRIKSQREEL-QKELSQINPDH 596 Query: 567 ERLELWTLNQELA 579 E + ++L Sbjct: 597 EPDRYREILRKLQ 609 >UniRef50_C8W3K3 DNA primase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W3K3_DESAS Length = 599 Score = 526 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 189/605 (31%), Positives = 286/605 (47%), Gaps = 33/605 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G IP+ I ++ R+DIV +I V LK++GKN+ CPFH EKT SF+VN EKQ +H Sbjct: 1 MRGVIPQEIIEEVRVRSDIVQVISEYVPLKRKGKNYIGYCPFHQEKTASFSVNREKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLM + + F E V +LA N+++P E S E+ +RQ +++ Sbjct: 61 CFGCHTGGDIFRFLMLQEAISFPEAVRKLAQTLNIDLPVE-LDPKSLDEKRKRQAAWEIN 119 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN-PEN 178 D FY L +A AR YL KRG+SH++ F +G+APP WD++ + Sbjct: 120 DLAKNFYNYVLLNHKIAQPARDYLVKRGISHDIAQSFELGYAPPRWDSLALYLQKKHGID 179 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETD 237 + +++ G+ N GR YDRFR R++FPI ++ G+ IGFGGR L D PKYLNSPET Sbjct: 180 YEKMLELGLCAVNKSGRRYDRFRHRLIFPIINETGKTIGFGGRALDETDNPKYLNSPETK 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 F+KG+ LYGL+ A+Q E +V+EGYMDVV GI AVASLGTS T + +LL Sbjct: 240 YFNKGQTLYGLHLARQGIREKGFAIVMEGYMDVVTAHFAGIKNAVASLGTSLTLEQGKLL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T +VI YD D+AG A RAL+ G +R + +PDG+DPD +R G A Sbjct: 300 MRYTTDVILAYDSDQAGIKATLRALDILQKL---GFNVRVVTVPDGKDPDGFIRMAGTGA 356 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 FE +E+A+ L + V + + + LP ++ + R ++ Sbjct: 357 FENLIEKALDLVEYKLWQFENSVGHNLSFADKMNAVQTILPNLNYMYSAVEREEAAKKAA 416 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQ---------------------LKRTTMRILI 455 + L I ++ + + ++ + L+ Sbjct: 417 SLLKISWEAIYSDFLRYKKNTEKNQQTRTNYDKNVNNKHNLINHGQNKMDAVEKAEQGLL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 L ++NP + +L+ ++ L Sbjct: 477 ILALENPSWVETIKKGLGEVFFSNKEYQKIFDLLLRESTKNDYQASCLFSFLDDREQ-NI 535 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 L L + Q +D + + S+ + + E L+ + +N +R L + Sbjct: 536 LSYLLSKK--IPGDNLVQIISDFIITVKRSIYKEQHELLLKKLAEAEKNN-DRESLSQIL 592 Query: 576 QELAK 580 QEL K Sbjct: 593 QELQK 597 >UniRef50_Q1K284 DNA primase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K284_DESAC Length = 603 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 184/607 (30%), Positives = 291/607 (47%), Gaps = 31/607 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP I+ + R DIVD++ VKLK G N CPFH+EKTPSF VN +Q +H Sbjct: 1 MA-RIPEDLISQVRERVDIVDVVSGYVKLKHSGDNHLGLCPFHSEKTPSFNVNSSRQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FLM + L F + V+ LA + +P + S R +R+ L ++ Sbjct: 60 CFGCGVGGNVFSFLMRMEGLAFPQAVKRLADQVGVVIPDDEPSPEEVRRRLEREELAEVY 119 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L P AR Y+ +RG E + RF +GF+P WD + + + Sbjct: 120 EQATRFYHDILLADPRGAQARGYIRRRGFDSEAVRRFRLGFSPDSWDALCEHLTSEGTDL 179 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 G++ +D+ G +D FR+R++FPI D G+V+ FGGRVL + PKY+NSPE+ + Sbjct: 180 DKARQLGLIRRSDKTGNDFDMFRQRLLFPIEDLSGKVVAFGGRVLDDSLPKYINSPESAL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK R LYGLY+A+Q ++VVEGY D +AL Q GI + VA+ GT+ T DH ++L Sbjct: 240 YHKSRLLYGLYQAKQAMRRERAVIVVEGYFDHLALVQAGIEHVVATCGTALTDDHAKILK 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ +D D AG+ A +RA+ + L G ++ + LP G+DPD+ VR+EG EAF Sbjct: 300 RYVERVVLLFDEDAAGQKACFRAMPSLLQ---QGLEVMTLSLPAGDDPDSCVRREGAEAF 356 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 R+ +A + Q + +AR L ++ +VP + R +L + Sbjct: 357 LQRLNEARSAIEVHMEVTLEQAG-DRAEAQARAIDTVLQMMQRVPDDIQRNLHLGQLAQR 415 Query: 419 LGILDDSQLERLMPKAAE--------------SGVSRPVPQLKRT----TMRILIGLLVQ 460 G+ + +L E + RPV + + L+ L++ Sbjct: 416 SGVTVELLQRQLERTQVEDQPPAPRPQPAPRPAVAPRPVEPEEIQGDFKAQKWLLTLMLA 475 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 + ++ V + + ++ +L+ L +L Sbjct: 476 DGGVSGTVEEQGIDALFDNAVCQKVAQQIQRAHAEQREPGEWMLDQCEDPRAQDLLTQLL 535 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE-ER-----LELWTL 574 + + + E+ F D + S L+ R+ EL + R + E+ EL + Sbjct: 536 VREQELVSDDIEKIFGDCRQAVVRSQLKQRRAELHTQMRAAEQHGDSEKQTACLQELTRI 595 Query: 575 NQELAKK 581 N+EL ++ Sbjct: 596 NRELKRR 602 >UniRef50_Q8R969 DNA primase (Bacterial type) n=4 Tax=Thermoanaerobacterales RepID=Q8R969_THETN Length = 600 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 177/593 (29%), Positives = 276/593 (46%), Gaps = 25/593 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R I ++ DIVD+I V+LK+ GK F CPFH EKTPSF V+ KQ YH Sbjct: 1 MA--YTRESIEKVIEANDIVDVISDYVELKRAGKEFRGLCPFHREKTPSFMVSPTKQVYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A GN + F+M+ + L F E +E LA + + S + + +Y++ Sbjct: 59 CFGCNASGNVVTFIMDIENLSFKEAIEFLAERAGIPLEEVDLSEEEAKRKKIIEEIYRVN 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ + L A +YL+ RGLS I +F IG+AP D++L G Sbjct: 119 KIAALFFHRKLFSEEGVKALEYLKSRGLSSTTIKKFGIGYAPSN-DDLLNFLKGKGYKEN 177 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L AG++V G+ YDRF++RVMFPI D RG V+GFGGR L + PKYLN+PET+IF Sbjct: 178 FLSKAGLVV-YKSGKYYDRFKDRVMFPIIDVRGNVVGFGGRALDDSLPKYLNTPETEIFK 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ L+ + A++ + ++ ++VEGYMD ++L Q GI+ AVASLGT+ T D +L+ R Sbjct: 237 KGKTLFAINFAKKT--QDDKFIIVEGYMDAISLHQAGIDCAVASLGTALTEDQARLIKRY 294 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 NV+ YD D AG +A R L+ ++ + +P+G+DPD ++KEG EAF Sbjct: 295 KKNVVIAYDADEAGVNATLRGLDILEKLN---INIKVLSIPEGKDPDEFIKKEGSEAFRR 351 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 +E A L F D + R I+++ E R Sbjct: 352 LVENAESLIEFKSKIFKKGFDFEKVEDRIIYVKKIASEIAKISDEVKREVYISAAAKTAQ 411 Query: 421 ILDDSQLERLMPKAAESGVSRPV-------------PQLKRTTMRILIGLLVQNPELATL 467 I +++ + + K + + LI LL+ + L Sbjct: 412 IPENAVRTEVDRFVKRETEKKQKFMYRTGNIRHNIYSSSKISPEKYLIALLLHDNNLYHK 471 Query: 468 VPPLENLDENKL-PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 + + D + +F E+V++ + ++ + +N + + + Sbjct: 472 IKGVIKPDMLEDSKLKPIFEEIVSSLEGGKQVQIKDIVYLIQEEDNLISDFN-DIVKALF 530 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + Q D L + + L ++EE+ L + E L +L Sbjct: 531 EAEDLSQMVDDILQKILLNNLARKREEIRKEILNAHLLGDVEKE-RELLIKLQ 582 >UniRef50_C9R940 DNA primase n=1 Tax=Ammonifex degensii KC4 RepID=C9R940_AMMDK Length = 611 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 188/595 (31%), Positives = 292/595 (49%), Gaps = 28/595 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G +P F+ ++L RTDIV L+ V+LK+QGKN+ CPFH E+TPSFTV+ EKQF++ Sbjct: 1 MRGYVPPEFVKEVLDRTDIVALVGEYVRLKRQGKNYVGLCPFHAERTPSFTVSPEKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+A+ FLM +KL+F+E +E LA L +P ++ R + + +L Sbjct: 61 CFGCGVGGDALKFLMLQEKLDFLEALERLALRAGLSLPSQSRDPAWLARRRELEEGEELN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ SL AR+YLE+RG+S E+ RF++G+APP + +L+ ++ Sbjct: 121 RLSLEFFTASLWGERGEPARRYLEERGVSEEIARRFSLGYAPPEEEALLRYLRARGITKE 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIF 239 + + G+ GR DRFR R++FPI D +G+V+GFGGR L PKYLNSPET +F Sbjct: 181 AAVKWGLASRTSAGRVVDRFRGRLIFPIFDPQGKVVGFGGRALVSYLQPKYLNSPETPLF 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K +LYGLY+A+ ++VEGY+D + L Q+G YAVASLGTS T + ++LL R Sbjct: 241 NKRNELYGLYQAKDAIRAAGFAVLVEGYLDAITLHQFGFGYAVASLGTSLTQEQVRLLSR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T V YD D AG A WR L+ G ++ + LP G+DPD +R G A+E Sbjct: 301 YTGKVYIAYDSDTAGEAATWRGLDIL---AGAGLEVLVVELPQGKDPDEFLRALGPAAWE 357 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A + A+PL + LM L T + + LP ++ + R + + Sbjct: 358 ASLASALPLLEYKGKKLMAG-GLVTARDKLKALRALLPNLACLRTLPEREEGIRLVSRIT 416 Query: 420 GILDDSQLERLMP--------------KAAESGVSRPVPQLKRTTMRILIGLLVQNPE-L 464 G+ + + L+ K+A++ + R L+ L PE L Sbjct: 417 GLSWEVVRDELLRFTGEEEVTTRLKSDKSAKNKHEALESRACFAAERGLLQALFCRPEIL 476 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDD 524 A + P ++ L + ++ L A L ++ Sbjct: 477 AEVEEAGGEELFTHPPCRAVYSALKEALAAGEDISPTHLASRLPEEALDAAAGILVGEEE 536 Query: 525 IADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + D L + +L+ ++++L + +E E+ +EL Sbjct: 537 SPP-------WKDCLRFLRMNLVRQKRKQLAGKLSLAEARGDE-EEVRRCLEELQ 583 >UniRef50_Q31EM4 DNA primase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31EM4_THICR Length = 576 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 246/572 (43%), Positives = 348/572 (60%), Gaps = 17/572 (2%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 G IPR FI DLLAR DIV +I+ RV LKK G N+ ACCPFH+EKTPSF V+ +KQFYHC Sbjct: 6 KGTIPRSFIEDLLARADIVQVINQRVPLKKAGTNYKACCPFHDEKTPSFNVSAQKQFYHC 65 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCGA G+A+ FL +YD L FVE VE LAAM+ +EVP E + ++ + + LY +M Sbjct: 66 FGCGASGDALKFLTDYDGLSFVEAVETLAAMNGMEVPREKLTQKQAQQQQKTRDLYDVMH 125 Query: 122 GLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + FY+Q L P + A+ YL++RGL+ E+ F IGFAPPGWD+++ + +Q Sbjct: 126 SVAKFYRQQLKNHPTSEEAKTYLKQRGLTSEIAKEFVIGFAPPGWDSLVSNLKADATLKQ 185 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIF 239 L++ GML+ + G++YDRFR R+MFPIRD RGRVI FGGRVL + PKYLNSPET IF Sbjct: 186 QLVETGMLIQKEDGKTYDRFRHRIMFPIRDGRGRVIAFGGRVLSSEEQPKYLNSPETPIF 245 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYGLYE +Q + N +LVVEGYMDVVALAQ+GI AVA+LGT+ T +H+ ++FR Sbjct: 246 HKTVTLYGLYEMRQARQQVNHILVVEGYMDVVALAQFGIRNAVATLGTAITTEHLDIMFR 305 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 N V+ C+DGD AG+ AAW+ALE ALP M D R ++F+FL GEDPD+ VR+EG E F+ Sbjct: 306 QVNEVVFCFDGDEAGQKAAWKALELALPKMQDTRSIKFLFLDQGEDPDSTVRQEGVEGFQ 365 Query: 360 ARMEQAMPLSAFLFNSLMPQV--DLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 R++QAM LS FLF L+ ++ +ST +G+ +L LA P I+ PG L + L + Sbjct: 366 KRIQQAMTLSGFLFKGLIGRLGSPVSTVEGQQQLIALATPYITSAPGAMP-DLLTKVLSD 424 Query: 418 -------KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 +LG + ++ +A+ +PV + + LI LL+ AT+ Sbjct: 425 YVDVPVWRLGQIMGIRVSSTKQPSAKKKNEQPVRIKATSIVLRLIRLLMLRSHWATVFSD 484 Query: 471 --LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA-TLEKLSMWDDIAD 527 L+ L E+ + + ++ LE + G N A L+++ + Sbjct: 485 ELLQELQESHNAEFRFLAQSIQVLKQNAYISES--LESWLGEPNRAHVLKQVYAIVIQEN 542 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + E F + + L + + ++ + ++ Sbjct: 543 EAFIENEFKAIVLQIGSELKKEKDKKSLQKKL 574 >UniRef50_A8ZUC5 DNA primase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUC5_DESOH Length = 613 Score = 523 bits (1347), Expect = e-147, Method: Composition-based stats. Identities = 182/611 (29%), Positives = 288/611 (47%), Gaps = 48/611 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP I ++ DIVD++ V+LKK GKN+ CPFH+EKTPSFTV+ +KQ +HCFGC Sbjct: 3 IPDDIIANIKNSADIVDIVSEVVRLKKTGKNYLGLCPFHSEKTPSFTVSPDKQMFHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G+ FLM + L F E V LA + +P + +RQ L +M Sbjct: 63 GEGGSVFTFLMKHQGLGFPEAVALLAKRCGIALPRPEKGSREAKDVSERQRLLSVMQRAA 122 Query: 125 TFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY L++ P A +Y+ +RGLS +++ F +G+AP GWD + + + Sbjct: 123 AFYHSCLREGPGGERATRYMAERGLSDDMVRDFQLGYAPGGWDALTRFLSKHKIPMPLAE 182 Query: 184 DAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 AG++V N +G YDRFR R++FPI D GRVI GGRV+ + PKYLNSPET ++ K Sbjct: 183 QAGLVVLNREGSGYYDRFRNRIIFPITDLTGRVIALGGRVMDDTLPKYLNSPETPLYSKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 LYGL +Q + + + EGYMD ++L ++GI VA+LGT+ TA+H+++L Sbjct: 243 NSLYGLSHTKQMCRQAGTVYITEGYMDFLSLYRHGIKNVVATLGTALTAEHLRMLKGFVT 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + +D D AG AA R++E G Q + LP G DPDT VR+ G + FEA Sbjct: 303 KAVLVFDSDAAGIKAAQRSIEIFN--GEKGIQPFILVLPTGHDPDTYVRENGAQDFEALA 360 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 +A +FL S + + LS +G+ R+ + ++ V R +E+ +LGI Sbjct: 361 RKAGGAMSFLLESAVNRHGLS-LEGKIRVMSDLEESLAAVEDGVARSLYVKEVSERLGIE 419 Query: 423 DDSQLERLMP------------------------KAAESGVSRPVPQLKRTTMRILIGLL 458 + + LE++ + + V R L+ ++ Sbjct: 420 ESAVLEKVRQAAARRRSRSARPSLFTVDTSASGGDQRKEETTASVFGRSLRMERQLLSMM 479 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE- 517 + PE+ + + L L L+ T + +++ + + Sbjct: 480 LHVPEMISEIESRNVLSLFADERLKTIGTLLVTHRRALENRSVDIVDVVPDESLQRIVSA 539 Query: 518 -----KLSMWDDIADKNIAEQTFT------DSLNHMFDSLLELRQEELIARERTH----- 561 +L MW++ + + Q D+L+H + E R +L+ Sbjct: 540 LCVGDELCMWNETGCRKLIGQFVDSRLRHVDTLSHRIKAAEENRDGDLLDHLLKAKQEQV 599 Query: 562 --GLSNEERLE 570 L+ E++ E Sbjct: 600 RNKLTIEQKGE 610 >UniRef50_B3E613 DNA primase n=2 Tax=Desulfuromonadales RepID=B3E613_GEOLS Length = 588 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 170/586 (29%), Positives = 271/586 (46%), Gaps = 16/586 (2%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + ++ R I ++I V LK+ G NF CPFH EKTPSF VN ++ +HCFGCGA Sbjct: 4 NDTVREVAERLSIAEIIGEYVSLKRSGSNFLGLCPFHGEKTPSFNVNPAREIFHCFGCGA 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ F+M + + F E + +LAA + + + + + +R +M Sbjct: 64 GGDIFSFVMKIEGISFPEALRKLAARAGVAIEDRPLTDAEKQLKTERDQQRAIMLLTAQH 123 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y+++L +QP AR YL++R + E A + +G+AP D +++ + Sbjct: 124 YRETLTRQPEGAVARSYLQEREVDPETAAAYGLGYAPERRDTLIQLLRAKGLPLEQAEQL 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G++ D+G YD R++FPIRDK+G+ IGF GRVL N PKY+NSPE+ ++ K L Sbjct: 184 GIIRRGDRG-WYDLLHHRLIFPIRDKQGQPIGFAGRVLDNSLPKYINSPESPLYRKSSVL 242 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 +G+ A +D + ++VEGY D +AL + GI A+A+ GT+ T HI LL + V Sbjct: 243 FGVDLALRDIRQSGTAIIVEGYFDHLALYRAGIRNALATCGTALTDGHISLLKKHAQRVC 302 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +DGD AGR A RA+E L + + LP GEDPD+L++K G EAF R+ A Sbjct: 303 LLFDGDNAGRKATVRAMELCLE---QALPVYVINLPQGEDPDSLLQKHGVEAFNQRVAAA 359 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 P + L+ + + D R RL +P ++ R ++E+ LG+ + Sbjct: 360 KPAFEQFLHWLLAKTPADSIDQRVRLMDEIIPRFQRIKDPVERDLYQKEICRLLGVDLQA 419 Query: 426 QLERL-------MPKAAESGVSRPVPQ--LKRTTMRILIGLLVQNPELATLVPPLENLDE 476 RL P A ++PV Q + +T ++GLL PE + L+ Sbjct: 420 FRRRLAGQRDQQQPVAQRQTATKPVTQTIARDSTQETMLGLLAAYPEARLEIRTLDLQQL 479 Query: 477 NKLPGLGLFRELVNTCL-SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 L L + ++ G ++L + +L + D Sbjct: 480 FDQQHLPLAQAILAAGEGEHDGPLWPEVLARLEQEQQKELVARLLIQDQHLAGIDWRAAL 539 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 L +++ R T +EE EL +L + Sbjct: 540 RQCLKR-QKQGETRGLKQIALRLATLPEDSEEYQELLKTADQLRNQ 584 >UniRef50_C7IFS4 DNA primase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IFS4_9CLOT Length = 605 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 175/603 (29%), Positives = 297/603 (49%), Gaps = 35/603 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKN+ CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGVISEYVKLEKKGKNYFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN + F+M+ + L+F E + LA +++P + + ++ L ++ Sbjct: 61 CFGCGKGGNVLHFIMSIENLDFPEALRFLADRAKIQIPDITEGVRNDEKAGLKKELLEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F++ +L YL R + + IA+F IG+A +D + K + Sbjct: 121 LEAARFFRDNLNNEKNNIPNSYLMNRKIQKQTIAKFGIGYAEDRYDILYKHLKAKGFSDS 180 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 S+ +G+++ + G+ YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET+++ Sbjct: 181 SIKQSGLVIYKEESGKIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG+ LY L A+ ++ +L++ EGYMDV++L Q GI +VA LGT+ T + +LL + Sbjct: 241 QKGKHLYALNFAKSACSK--QLILSEGYMDVISLHQCGIINSVAPLGTALTENQGRLLKK 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +D D AG+ AA+R+L+ G +R + +P G+DPD ++ G F+ Sbjct: 299 YTEEIVLSFDSDSAGQAAAFRSLDLLNEI---GCNVRVLTIPSGKDPDEFIKAHGVTEFK 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L ++L Sbjct: 356 QLVDRSKGLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSDEL 415 Query: 420 GILDDSQLERLMPKAAE--SGVSRPVPQLK-------------RTTMRILIGL------- 457 G+ S L + + E S + VP+ + L+ L Sbjct: 416 GVSTQSILSEIAKQQKEADSNFKQQVPRSNNFSRNPIRKSTVVKNQEEWLVRLQLMLLAT 475 Query: 458 -LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 + N ++ + F V S+ G+ TG++L A + Sbjct: 476 ICIDNNVYFSIKDVISWDSFESDEVKNAFDFAVERIESKAGILTGEILNKLS-PGMAESF 534 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 + I + N + D + + LE R+ ++I +++ L+ + LN+ Sbjct: 535 ANIVQSQSIFEDNK--KAALDIIRKIDLFSLEERKNQIIELKKSSDLTEGDVEL---LNR 589 Query: 577 ELA 579 EL+ Sbjct: 590 ELS 592 >UniRef50_P33655 DNA primase n=35 Tax=Clostridium RepID=PRIM_CLOAB Length = 596 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 173/596 (29%), Positives = 295/596 (49%), Gaps = 28/596 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I I + DIVD++ +VKLK+ G+N+ CPFH+EKTPSF+V+ +KQ Y CFGC Sbjct: 6 IAEDIIQKVKDLNDIVDIVSEKVKLKRTGRNYSGLCPFHHEKTPSFSVSQDKQIYKCFGC 65 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G GN I F+M FVE V+ LA N+ + + + + LY + Sbjct: 66 GEAGNVITFVMKTKNFSFVEAVKYLADKVNITID-DNKDKYYAKNKEKYDKLYSMNVEAA 124 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ ++L + A++Y RG++ + + RF +G+A W +L LI+ Sbjct: 125 RYFFRNLDS--NSKAKKYFLDRGINQKTMRRFGLGYAKDDWRQLLSFMKSKGYTELELIE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG++V YDRFR RV+FP+ D +G+VIGFGGRVL + PKYLNSPET IF KG Sbjct: 183 AGLIVQ-KNKAVYDRFRNRVIFPVFDYKGKVIGFGGRVLDDSKPKYLNSPETKIFKKGTN 241 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A ++N + +++VEGYMD ++L QYGIN VASLGT+ T D +LL R + V Sbjct: 242 LYGLNFAVKNNI-GDTIIIVEGYMDCISLHQYGINNVVASLGTALTKDQAKLLKRYASKV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + YD D AG+ A R + G ++ + +PDG+DPD VRK GKEAF +E Sbjct: 301 VISYDADTAGQAATLRGFDIL---REAGFDIKIIKIPDGKDPDEFVRKNGKEAFMRLVEN 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+ + + N V+L + + +I ++ + +++ +K GI + Sbjct: 358 AVSIIDYRINRAFENVNLKDSESVIKYVKDISEIIEEL-DPVEKDVYIKKISDKTGIREQ 416 Query: 425 SQLERLMPKAAESGVSRP-------------VPQLKRTTMRILIGLLVQNPELATLVPPL 471 + + + +SG + V + R L+ L++++ ++ + + Sbjct: 417 AIYDLISTDIQKSGNNIEKMNKNSNYGQNLYVESAHVKSERYLLRLMIEHKDIRSYIESK 476 Query: 472 ENLDENKLPGLGLFRELV----NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 + D+ + ++ + S G + +++ + K+ + + Sbjct: 477 ISADDLIMESHKKIYNIILNFEDNLSSDLKSKFGFIESRCDDGESSSEIVKIEEQNIMLS 536 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN--EERLELWTLNQELAKK 581 +N + D + ++ LE ++++++ + +E +EL +E+ + Sbjct: 537 ENNVKDLVDDFITNIKKFRLEESKKKIMSEIKGLEEKGLFDETIELIKRMEEIQNQ 592 >UniRef50_C0QK00 DnaG9 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QK00_DESAH Length = 602 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 180/601 (29%), Positives = 292/601 (48%), Gaps = 29/601 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ I++++ +DIV++I V LKK G+N+ CPFH+EK+PSF+V+ EKQ +HCFG Sbjct: 2 LIPQEKISEIINASDIVEVISEVVLLKKSGRNYFGLCPFHSEKSPSFSVSPEKQIFHCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C A GN FLM + + F E V+ AA +N+ V + + ++ L +L + Sbjct: 62 CSAGGNVFSFLMRHHGISFPEAVKMAAARYNIVVEMGSVDPERKRRIALKEELLRLNTAV 121 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y+ L P A AR YL RG++ E I F++G+A WD++++ F R Sbjct: 122 MKHYKVLLTDSPGAQGARNYLRDRGITPETIDTFSLGYAEDRWDDMVRFFRHLKLGRNLA 181 Query: 183 IDAGMLVTNDQGR-----SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 +G+++ R YDRFR R++FPI D +V GFGGRV+ + PKYLNSPET Sbjct: 182 EQSGLVLERASDRGGKKGYYDRFRNRIVFPIVDTNMQVAGFGGRVMDDSMPKYLNSPETP 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ KG+ LYGL+ A+Q + + + +VEGY D ++L Q GI VASLGT+ T DH++ L Sbjct: 242 VYSKGQILYGLHLAKQYCRQVDCVYIVEGYFDFLSLFQNGIKNTVASLGTALTVDHVRRL 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + +D D AG +AA R + T + +G +R + LP G DPD+ V EG +A Sbjct: 302 KGFATRAVLVFDSDNAGINAAKRCVST---FAAEGVDVRILVLPKGHDPDSFVNSEGADA 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F+ +QAM + FL ++ M + S+ +GR + ++++ R + L Sbjct: 359 FKRAADQAMSVMDFLTDTAMKKHG-SSVEGRIAVLEEMKLPLARIEDSAARSLYVRGLAE 417 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQL----------------KRTTMRILIGLLVQN 461 +LGI + + LER+ + G +PV ++ +++Q+ Sbjct: 418 QLGIDESAVLERVRNVVSTQGGGQPVSLPGNGDLSDPDDSGETLESYRREEQMLAMIIQH 477 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 PE+ LD +V G+ L+ + + L+M Sbjct: 478 PEVGREALNQGVLDHFYCERFRRIGRIVAEQDGNEGMMAADLMAAMADDQDRQLVASLAM 537 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELR--QEELIARERTHGLSNEERLELWTLNQELA 579 D + ++ E+ + + ++ I R G S L +E+ Sbjct: 538 MDGGLEGDVLEKAVF-LMKRIVKVRVKTENTLANQIRRAEQGGDSRLPFELLKKRQKEIR 596 Query: 580 K 580 K Sbjct: 597 K 597 >UniRef50_P47762 DNA primase n=23 Tax=Bacillales RepID=PRIM_LISMO Length = 626 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 182/625 (29%), Positives = 291/625 (46%), Gaps = 52/625 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP I+ + + DIVD+I V+LKKQG+N+ CPFH EKTPSF+V+ EKQ +H Sbjct: 1 MA-RIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGEKTPSFSVSPEKQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHN----LEVPFEAGSGPSQIERHQRQTL 116 CFGCG GN FLM +D L FVE+V+++A M + +E+P E + E + + Sbjct: 60 CFGCGKGGNVFSFLMEHDGLTFVESVKKVADMSHLDVAIELPEERDTSNLPKETSETAKM 119 Query: 117 YQLMDGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 ++ Y L T+A YL++RG+S +++ F IGFAP + Sbjct: 120 VEMHQLTAKLYHYILMETEEGTAALTYLKERGMSEQMMTTFQIGFAPNHHATITSFLEKR 179 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSP 234 + Q AG+L D G+ DRFR R+MFPI + RG++I F GR+ +D PKYLNSP Sbjct: 180 GMDLQLAGAAGLLSERDDGQMVDRFRNRIMFPITNDRGQIIAFSGRLFDRDDGPKYLNSP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET +F+K R L+ EA+Q + + ++EG+MDV++ + G+ AVAS+GTS T +H Sbjct: 240 ETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVISAEEAGVQNAVASMGTSLTEEHA 299 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 L+ R TN I CYDGDRAG +AA++A + + + LP G+DPD +R G Sbjct: 300 DLIKRLTNRAIICYDGDRAGIEAAYKAGTLLVERNR--LDVFVLQLPAGKDPDDFIRASG 357 Query: 355 KEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E F+ + Q M +AF + L + +L + L I+++ R + Sbjct: 358 PEKFKEVYKQQRMTWTAFKIHYLRKERNLQNETEQIGYIDDCLREIAKLDQAVERELYLK 417 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT----------------------- 450 +L ++ + ++ ++L S SR + Sbjct: 418 QLADEFELTIETLKQQLQQSLKNSQKSRQMASYNEPPIDDSFMGMMPQEGAEMLFSFEQP 477 Query: 451 ----------MRILIGLLVQNPELATLVPPLENL-DENKLPGLGLFRELVNTCLSQPGLT 499 + L+ ++++ + L+ L L+ L+ Sbjct: 478 AQKLSAHTISEQQLMKAMMESRDNFLLIKQLLGDTTFYHDNYEALYTYLIGYFAEGNDAD 537 Query: 500 TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + ++ + L M I+ + F D + + LE +++EL Sbjct: 538 PTKFMDSVPDAAMKGLISSLEMV--ISPDEQGKPQFEDYIRSLKRYKLEQKKKELEQELA 595 Query: 560 ---THGLSNEERL---ELWTLNQEL 578 + E E+ LN++L Sbjct: 596 TYNRENDNENEIRVMLEIVQLNRQL 620 >UniRef50_B8CXH2 DNA primase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CXH2_HALOH Length = 599 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 171/600 (28%), Positives = 282/600 (47%), Gaps = 42/600 (7%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+++L DIVDL+ V LKK GKN+ CPFH EKTPSFTVN E+QF++CFGCG Sbjct: 6 EKFLDELKGSLDIVDLVSDYVDLKKVGKNYVGLCPFHQEKTPSFTVNPERQFFYCFGCGV 65 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I FLM + + F E+V+ LA +EVP + + + +R+ L+++ F Sbjct: 66 GGDVISFLMEIENITFKESVKMLARRSGMEVPGD--DPRHRQQLREREKLFKINHLTAKF 123 Query: 127 YQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y L+ A YL+KRG + + I +F +G+AP WD +LK G L+ A Sbjct: 124 YHYLLLETDQGLKAINYLKKRGFTKKDIKKFGLGYAPDRWDGLLKFLTGKGFEEGELVKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHKGR 243 G+++ ++ YDRFR+R++FPI + RG V+ FGGR++ +D PKYLNSPET +F+KG+ Sbjct: 184 GLVLLSNNNNYYDRFRDRLIFPIFNSRGEVLAFGGRLIDSDESQPKYLNSPETPVFNKGK 243 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ + + + ++++EGY DV+ Q GIN VASLGT+ T++ +L+ R +N Sbjct: 244 NLYGLNWAKHEMRKSSEVIIMEGYTDVLRAHQMGINNVVASLGTALTSEQARLIARYSNL 303 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 YD D AG A R L+ G ++ + LP DPD +RK+G + F +E Sbjct: 304 AYISYDADTAGTKATLRGLDIL---KNAGLNVKVVDLPQDSDPDEYLRKKGVDEFYTLLE 360 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 +A+ L F + +DL+ G+ + + +++ + R Q + +K + Sbjct: 361 EAVDLVEFKIKQGLENIDLNNVQGKIEGTRKLVKILATLEDRIEREIYIQNVSDKFNLDP 420 Query: 424 DSQLERLMP-------KAAESGVSRPVPQLKRT----------------TMRILIGLLVQ 460 + + K S +R L+ + Sbjct: 421 EILKSEVEKLIKINKNKDKNSSRRYTKKSNRRYFTNKNNKTNSFRSIHFIEEKLLHAFID 480 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 PEL + N D ++E+ G ++ + + +L Sbjct: 481 FPELRNTIVNEINTDMFSKE----YQEVAEFLWENKDSLKGDIINNIESKVLRNKVMELM 536 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + E+ + + + + + L + + + L+ L L K Sbjct: 537 INNKTVQPEGVER----LIVNFKEENVYNIKVGLYKKLQENNLNVN---RLNKLLINFQK 589 >UniRef50_A6TSH0 DNA primase n=3 Tax=cellular organisms RepID=A6TSH0_ALKMQ Length = 611 Score = 519 bits (1338), Expect = e-146, Method: Composition-based stats. Identities = 178/585 (30%), Positives = 277/585 (47%), Gaps = 36/585 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M P I+++ A+ +I D+I + LK+ G + A CPFHNEKTPSF V+ EKQFY Sbjct: 1 MEKGFPEELIDEIKAQNEITDVISQYISLKRIGSSNKALCPFHNEKTPSFNVSTEKQFYK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L+F+E ++ LA N+E+P + S E R +++ Sbjct: 61 CFGCGEGGDVIQFIMKMENLDFMEAIKMLAQRANIEIPEKDQSLEVAEEMKLRNLFWEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +Y L + + A YL +RGL + I F +GFAP W +++ + + Sbjct: 121 KKAAKYYYHCLTKEKSI-ALGYLSERGLISKTINTFGLGFAPNEWQGLIQHLTQEGYDLK 179 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+++ +Q YDRFR R++FPI D RG V+GFGGRVL + PKYLNSPET +F Sbjct: 180 DIEKCGLIIPKKEQSGYYDRFRNRIIFPIFDIRGNVVGFGGRVLDDSLPKYLNSPETKLF 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K R LYGL A++ +L++VEGYMDV+ L Q G VA+LGTS T +H Q+L R Sbjct: 240 NKSRILYGLNIARKYMT-TRQLILVEGYMDVIPLYQQGFKNVVAALGTSLTKEHAQVLKR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++VI C+DGD AG A R++E ++ M +P G DPDT ++ +GKE F+ Sbjct: 299 YCDDVILCFDGDEAGIKATLRSIEIL---KNGDFNIKVMMMPKGVDPDTYIQSKGKEGFQ 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A+ + + + +GR L+ +I Q+ + Q++ + Sbjct: 356 RAINAALNVVDYQIMLAKEKYPQDKVEGRVNLARDIAKIIKQIKSPIEKEAYIQKVSQET 415 Query: 420 GILDDSQLERLMPKAAESGVS------------------------RPVPQLKRT-TMRIL 454 GI D+ + + + PV Q T + L Sbjct: 416 GINQDAIALEVYGHQKKQKPNSETKKYSSNYNRNNNSKYKYIEALPPVEQKGHTIIEKQL 475 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 I ++ N + ++ + L E + T QL+EHY Sbjct: 476 IKFMLLNINAIPHLMEKVEAEDFTIGKHQLIVEYIYENHQNLQ-GTQQLVEHYPD--LKE 532 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 T+ L + + L ++ L +L RE+ Sbjct: 533 TMTDLLHIEIQHI--DMNKAIDQYLRNLKRYKLLYEIRQLQQREK 575 >UniRef50_D2RM34 DNA primase n=2 Tax=Acidaminococcus RepID=D2RM34_ACIFE Length = 603 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 171/595 (28%), Positives = 263/595 (44%), Gaps = 28/595 (4%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAH 67 F + D++ ++ V LK++G + CCPFH EKTPSF V+ + +HCFGCGA Sbjct: 10 NFKEQVRQAADLLTIVSETVSLKRRGTQYWGCCPFHGEKTPSFKVDPARGLFHCFGCGAG 69 Query: 68 GNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFY 127 G+ ++M D L F E +++LA + + VP A S + + + D + F+ Sbjct: 70 GDVFSYVMKRDNLTFPEALKQLAEKYGIPVPERAKSAREIAREKESREVMGANDLASRFF 129 Query: 128 QQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L QYL RG+ ++I F +G APP + + + L+ AG Sbjct: 130 HSCLVNTRYGERGIQYLAGRGIGRDIIDSFGLGLAPPDFQTLSTALEKRGVTEEVLLKAG 189 Query: 187 MLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGR 243 ++ +G R YD+FR RVM PIRD RGRV+GF GR+L D KY+N+PET FHKG Sbjct: 190 LVSPRQRGTRVYDKFRARVMIPIRDPRGRVVGFTGRILDKDASPAKYMNTPETAWFHKGN 249 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 L+GL A + + L+VEG+MD ++L GI++AVAS+GT+ T LL R T Sbjct: 250 LLFGLDRASGPIRKRQQALIVEGHMDAISLHAAGIDWAVASMGTAFTEHQAALLKRLTPE 309 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ C+D DRAG AA RA+ AL G + R M + DG+DPD +RKEG+EAFE + Sbjct: 310 VVFCFDSDRAGLAAAMRAIPLALQ---AGLKCRVMHVTDGKDPDEFIRKEGREAFEELLN 366 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A P + ++++ + DL T G+ LPL + +EL +L I + Sbjct: 367 NAKPGMDYQVDTVLGECDLETLGGKVEAVDKVLPLFRDCQSDVEVGERIRELSRRLAIDE 426 Query: 424 DSQLERLMPKAAESGVSR------------PVPQLKRTTMRILIGLLVQNPELATLVPPL 471 + R V R+++ ++ + Sbjct: 427 GLIQSEYRKLTHQESGGRAYNPEWLTQQKVKVTSPTEQAERLVLRAFLEGIPPRPGQEGI 486 Query: 472 ENLDENKLPGLG-LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 ++D P +F + L H L+ +K Sbjct: 487 AHVDSFTSPSRQAIFTTFLRMVQEGTYKDPRDLFPHLDDAGAGELTGILT---LNVEKGT 543 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER-----LELWTLNQELAK 580 D L + + L+ E+ + E+ E + E+ K Sbjct: 544 LPSILADCLRRLQIAALDREYEKHSQLAEKYEKEGNEKFLQELAECRRIKMEIGK 598 >UniRef50_A6VU44 DNA primase n=2 Tax=Marinomonas RepID=A6VU44_MARMS Length = 666 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 223/488 (45%), Positives = 312/488 (63%), Gaps = 8/488 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRIP FI++LLARTD+ D++ +R+ LKK G+N+ A CPFHNEK+PSF++N KQFY+ Sbjct: 1 MAGRIPDQFIDELLARTDLTDVVASRISLKKTGQNYSALCPFHNEKSPSFSLNPNKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNAI F+M +D L+FV+ +E LA +EVP E G+ Q L + + Sbjct: 61 CFGCGAGGNAISFVMEHDHLDFVDAIEVLAKDAGMEVPREQGAPD---RYEQNAELLKRL 117 Query: 121 DGLNTFYQQSL-QQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + FYQQ L Q P A YL + RGLS ++ F +G+APPGWDN+LK+ G E+ Sbjct: 118 SESSQFYQQQLTQHPDKKKATDYLSKDRGLSGQIAKVFGLGYAPPGWDNLLKKVGTRAES 177 Query: 179 RQSLIDAGMLVTNDQ--GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 ++ L+ GML+ G YDRFR+R++FPIRD RGRVI FGGR G++ PKYLNSPET Sbjct: 178 QEQLLLGGMLIEKKDQPGHYYDRFRDRIIFPIRDSRGRVIAFGGRAFGDEKPKYLNSPET 237 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F K ++LYGL+EA+Q+ ++++VVEGYMDV+ LAQ+GI AVA+LGTS + HI+ Sbjct: 238 PVFQKSQELYGLFEAKQNTPILDQIIVVEGYMDVIVLAQHGITNAVATLGTSVNSQHIRK 297 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 LF+ + VI C+DGD+AGR AA R LE +LP M D +Q+RF+FLP+GEDPD+LVRKEGKE Sbjct: 298 LFKLVSKVILCFDGDKAGRAAAIRGLEASLPVMQDEKQVRFLFLPEGEDPDSLVRKEGKE 357 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET-LRIYLRQEL 415 AF R+E A LS LF+ QV L +G A+ + A+ +I Q+P E R L ++L Sbjct: 358 AFNHRLEDASSLSHVLFDHARNQVTLGDEEGEAQFARNAMEMIKQIPKELTFRSVLIRQL 417 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 ++ GI ++ + + S ++ + + P+L+ + D Sbjct: 418 SDQSGIDSETLSNTVFKTRRQHTPSEGHEPTHQSHAQQIQHYDGDTPDLSHYDYEPSHGD 477 Query: 476 ENKLPGLG 483 + Sbjct: 478 YDDFHHSD 485 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 4/144 (2%) Query: 442 PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTG 501 P + ++ L+ +P +A + + L L +F ++ P TG Sbjct: 521 PPAAPSLSRIKQASLCLLLHPHIAKEIDLPDPLVNQANEELQIFCKIWRYFAKHPYKNTG 580 Query: 502 QLLEHYRGTNNAATLEKLSMWDDIADKN---IAEQTFTDSLNHMFDSL-LELRQEELIAR 557 LL +++ L D K A+Q D + + +L L L ++ Sbjct: 581 HLLGELTDKTTISSIYTLLNHQDATTKQKITNAQQEVLDMVLALEKNLGLNSSIARLKSK 640 Query: 558 ERTHGLSNEERLELWTLNQELAKK 581 + + EL L + +K Sbjct: 641 GNESIKDSSSKQELRNLMDLIRQK 664 >UniRef50_B5ELK4 DNA primase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK4_ACIF5 Length = 583 Score = 516 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 209/582 (35%), Positives = 320/582 (54%), Gaps = 13/582 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA FI+ LL D+V LID+RV LKK+G++F ACCPFH EK+PSF+V+ +KQ Y+ Sbjct: 1 MAN-FSPAFIDALLEHCDLVRLIDSRVPLKKKGRDFWACCPFHQEKSPSFSVSADKQIYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC AHGNAI FLM +D+L F E V+ LA + +P + +G + R L ++ Sbjct: 60 CFGCHAHGNAIGFLMAHDRLSFPEAVKTLADEVGVALPEDGPAGEQESLRP----LRAIL 115 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + Y+ +L + A++YL RGLS E+I RF +G+AP + ++ G P RQ Sbjct: 116 EKAIGVYRSALAEH--PPAQEYLRGRGLSEEIIGRFELGYAPSAAGFLSQKLGREPSLRQ 173 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L+ AG++ + G YDRFR RV+FPIRD RG+ +G GGR L PKYLNSPE+ ++H Sbjct: 174 QLLGAGLVSGREDGSVYDRFRGRVIFPIRDGRGQAVGLGGRSLDGHEPKYLNSPESALYH 233 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGR LYGL++A++ R+L+VEGY+DV+ L Q GI+YAVA+ GT+ +++LFRA Sbjct: 234 KGRVLYGLHQAREGMRRAGRVLLVEGYLDVITLHQAGIDYAVAASGTALGDSQMEMLFRA 293 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + V+ C+DGD AGR+AAWRA++TA ++ GR LR +FLPDG+DPD+LVR++G FE+ Sbjct: 294 AHEVLLCFDGDTAGRNAAWRAVQTAPEHLRAGRLLRLLFLPDGQDPDSLVREQGGAVFES 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + A P F L + +L+ D +A A + +V LR Q + G Sbjct: 354 MLPTARPAIDFFLEELQRRHNLAAEDEKALFLHAARDFLKRVSDPVLREVYEQRVQTLCG 413 Query: 421 ILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 + ++ + + L +T +R+L+ ++P L L ++ P Sbjct: 414 LAPVARRATSRAPRKATFSAAGGRSLFKTALRLLLNF-PEDPAWQALDRDLLPFLFDRDP 472 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN--IAEQTFTDS 538 + E ++ + L++ +L +A L M D ++ + + Sbjct: 473 MAEILAEALDILANMTHLSSHELFAKLSVLKHAEACYALVMSDSGDEEGQVLMRLEISGC 532 Query: 539 LNHMFDSLLELRQEELIARERTHG---LSNEERLELWTLNQE 577 + + L R + G LS +ER E+ L++ Sbjct: 533 VARVNQRLAAARSHFISRAADQGGLSALSEQERAEVVRLSRR 574 >UniRef50_Q3A142 DNA primase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A142_PELCD Length = 604 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 184/607 (30%), Positives = 291/607 (47%), Gaps = 32/607 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+GRI + ++ AR DIV++I + V LK+ G+N CPFH EKTPSF VN ++Q YH Sbjct: 1 MSGRIADEKVEEIRARADIVEVISSYVSLKRSGRNHVGLCPFHAEKTPSFNVNADRQIYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ FLMN + L F E V L + +EV EA S + R +R+ L ++ Sbjct: 61 CFGCEVGGDVFAFLMNIEGLAFPEAVRRLGERYGIEVEEEAVSPEEEQRREERERLLRVT 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L + P AR YL +RG ++ +F +G+AP W+ + + Sbjct: 121 EVACDFYHNLLLKDPSGKPARGYLRRRGFDGDIARQFRLGWAPAAWEALANHLRDKGFDS 180 Query: 180 QSLID-AGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 + D G++ ++GR YD FR R++FPI D+RGR + FGGR+L D PKY+NSPE+ Sbjct: 181 KWARDRLGLVRAGNEGRNDYDLFRRRLLFPILDERGRPVAFGGRILEGDGPKYINSPESP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK R LYGLY+A+ +VVEGY D +AL + G VA+ GT+ T +H++LL Sbjct: 241 IYHKARVLYGLYQARDAMRHKGEAIVVEGYFDQLALYRAGFQNTVATCGTALTPEHVRLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R V+ +D D AGR A +RA++ LP +G Q + L GEDPD+ +R + Sbjct: 301 KRFAERVLLLFDQDEAGRKATFRAMDVLLP---EGLQALVVTLDAGEDPDSFLRNHDAQK 357 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +AR+ A P+ + Q +GRAR L + +PG+ R ++L + Sbjct: 358 MQARLASARPVVEVFIERTLEQHG-EDIEGRARAVEKILAKLRLLPGDIERDLYLKDLAS 416 Query: 418 KLGILDDSQLERLMPKA------------AESGVSRPVPQLKRT-------TMRILIGLL 458 + G+ + + +P+A +R K+T RIL+ L+ Sbjct: 417 RTGLDEQLLRSKALPQAVPDPAPSSVPAVRPKPAARQAVPAKKTRRGVAEKAQRILLRLI 476 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 + L + + L + E + ++ G + + L Sbjct: 477 LCYESACDAARNLGLGELFEEGDLRILAERALSVSAESGPVAENMRIDDLSESQKGLLSG 536 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIA--RERTHGLSNEE----RLELW 572 + + D+ ++ F + ++ R ++L RE G E + E Sbjct: 537 ILLEDEGLFAENYDELFRKCHEMVNKERMKQRLQQLQELMREAERGQDFTEMTVWQREFQ 596 Query: 573 TLNQELA 579 L ++L Sbjct: 597 ELTRKLK 603 >UniRef50_Q3SPU7 DNA primase n=3 Tax=Nitrobacter RepID=Q3SPU7_NITWN Length = 634 Score = 514 bits (1324), Expect = e-144, Method: Composition-based stats. Identities = 190/599 (31%), Positives = 294/599 (49%), Gaps = 28/599 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P FI+++ AR + +++ RVKLK+ G+ F PF EKTPSFTVN +KQFYH F Sbjct: 2 RFPPSFIDEVKARLPVSEVVGRRVKLKRAGREFKGLSPFQQEKTPSFTVNDQKQFYHDFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HGN DF+M + + F E VE LAAM L +P + + +R R++L+++M+ Sbjct: 62 TGKHGNIFDFVMETEGVSFPEAVERLAAMAGLPLPRNSREDEQREQR--RKSLFEVMELA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +++Q+L V AR YL R + I F IG+A + + G +I Sbjct: 120 AKYFEQNLASRVGAQARGYLSDRAIVPSSIVEFRIGYATADRFALKEYLGSKGVPVADMI 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHK 241 +AG+L+ D YDRFR+R+M PI D+RGR++GFGGR L D PKYLNSPET IFHK Sbjct: 180 EAGLLIAGDDIPVPYDRFRDRIMIPIHDQRGRLVGFGGRALRKDVQPKYLNSPETPIFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G ++ + A+Q E N ++ VEGYMD +A+ Q GI VA++GT+ T + I L+R + Sbjct: 240 GSVVFNFHRARQPAHEANSVVAVEGYMDAIAVYQAGIKAVVATMGTAFTEEQIATLWRLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + C+D DRAG AA+R+++ LP + G+ RF+F+ + +DPD L+R++G EAF Sbjct: 300 PEPVVCFDSDRAGVAAAYRSIDRILPLLRVGKTFRFVFMDEQKDPDDLIREKGVEAFRNV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ----ELGN 417 + ++PL L+ D+ TPD +A L L+ + + + +L N Sbjct: 360 LSGSLPLWDVLWQRETDGQDVRTPDKQAALEQRLYALVRTIQDPAVNTAFFRTSRMQLAN 419 Query: 418 KL---GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 + K + + + ++L+G+LVQ PEL + Sbjct: 420 LFWQVNRGPSRNQKEAGSKFVRNELRIRGEDQRSGLQKVLLGMLVQYPELLEDKRDVVLR 479 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE--------------KLS 520 + L +++ L+ + E TL+ +L Sbjct: 480 LQFPDAFDQFLSHLFQLLVTEAKLSVSVIWERL-DHEFYETLQTVHGDAGAGKPRGHRLF 538 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER--LELWTLNQE 577 + + + L+H LL + EE I R R +E L L +E Sbjct: 539 ERFPVLKNDPPSDFVSGCLDHFIRILLWHQLEEDIERARLDAGEGDETAVARLLNLVRE 597 >UniRef50_C6CTW0 DNA primase n=4 Tax=Bacillales RepID=C6CTW0_PAESJ Length = 612 Score = 514 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 162/609 (26%), Positives = 258/609 (42%), Gaps = 35/609 (5%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G+IP I + DIVD + V L K GK CPFH+EKTPSFTV E Q +HC+ Sbjct: 4 GKIPDDVIEAVRRHHDIVDTVSKYVHLSKNGKYMKGLCPFHSEKTPSFTVTPELQIFHCY 63 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGS-GPSQIERHQRQTLYQLMD 121 GCG GN I F+ + F E V LA + V + +R + + + Sbjct: 64 GCGKTGNVIRFVEEIESYTFPEAVRVLAEEAGIPVTWANPDGSKPTAADTERSAVLEAHE 123 Query: 122 GLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 Y L +A+ YL RGL ++I F IG+AP WD + + + Sbjct: 124 LTAKLYNYLLNNTQHGRAAKDYLRDRGLGDKLINHFMIGYAPEQWDTLSRFLTARNFDSS 183 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + G+L G Y DRFR R+MFPI D+ G+V F GR++G PKYLNSPET +F Sbjct: 184 LMEKGGLLSAKSDGSGYVDRFRGRIMFPIWDRDGKVTAFAGRIIGEGQPKYLNSPETMLF 243 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R +Y L+ A+ + ++++ EGYMDV+ G+ +A++GT+ T +H +L R Sbjct: 244 TKSRTIYNLHHARPAIRKSKQVVLFEGYMDVIKSWSAGVKNGIATMGTALTEEHCSILAR 303 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA-F 358 ++ CYDGD AG+ AA +++ G ++ LP G+DPD + + G + Sbjct: 304 QAEEIVICYDGDDAGQAAAMKSIPML---EGAGLRVMVAMLPKGKDPDEYITEYGPDDYL 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++Q + + F L +GR A +++++ R QEL + Sbjct: 361 REVIDQPVTTTKFKLIYSRKNHILLKEEGRKNYLLEAAGIVAELDSAIEREVYLQELSRE 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVP------------------------QLKRTTMRIL 454 + + K E +P R L Sbjct: 421 FNFPLEVLKQDCHIKHQELQKKKPGRDNNDNSWNNGRNENRRRSGPPVLMPAYTYVERRL 480 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + +++++ ++A V N L L G+ + + Sbjct: 481 LHVMMRDRDVAQTVHEKLGDAFNIEDHAALAAYLYAFYAQGYDPDAGRFIASLQDERLER 540 Query: 515 TLEKLSMW--DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG--LSNEERLE 570 T + M D D I E D + ++ ++EE++ ER L+ + E Sbjct: 541 TAAAILMMDGDFPFDDAILEADIQDIIKVPRFREIDRKKEEMMQAERAGDHLLAAQMLSE 600 Query: 571 LWTLNQELA 579 + TL ++L Sbjct: 601 IITLERQLK 609 >UniRef50_B9XFW4 DNA primase n=1 Tax=bacterium Ellin514 RepID=B9XFW4_9BACT Length = 605 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 160/599 (26%), Positives = 273/599 (45%), Gaps = 24/599 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M G + + + +DIVD+I + + LK+ G NF A CPFH EK+PSF VN KQ +H Sbjct: 1 MTGFFSQATREQVRSASDIVDVIGSYLPLKRAGANFVALCPFHKEKSPSFNVNPHKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+ F+ Y+ + F + V+ LA + + + Q RH + L Q+ Sbjct: 61 CFGCHKGGDVFTFVKEYENIPFPDAVKRLAERAKIPLEMDNNPAQQQ-SRHLKDVLLQIH 119 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + +Q +L A AR YL +RG++ E I F +G+AP W++ + + Sbjct: 120 EQITQRWQSALANEAAGQIARDYLVQRGVTEEAIKLFRLGYAPDVWEDTVNWSRSKGFDP 179 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPET 236 + +G+++ + YDRFR R++FPI D++GRVIGF GRVL D KY+NSPET Sbjct: 180 VVMEQSGLILRKEGSDHYYDRFRGRLIFPICDEQGRVIGFSGRVLSGDQKTAKYVNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF KG+ +GL ++++ E +V EG +D++A G+ VA GT+ TADH ++ Sbjct: 240 PIFTKGKVFFGLDKSKRALLEAQSAIVCEGQLDLIACYMAGVQNMVAPQGTALTADHARI 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R V+ C+D D AG++AA R+L++ L G +R +P DPD+ +++ G E Sbjct: 300 LKRYAEEVVLCFDSDNAGQNAAVRSLDSLL---ASGLAIRVAVVPAPHDPDSFIKEYGGE 356 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AF+ +++A + N L D+++ GR + + + L Q+ Sbjct: 357 AFKELVKKASGFFDYYLNRLCETNDVASDKGRLIILQEMAEAVYKTGNVVLIDTYAQKTA 416 Query: 417 NKLGILDDSQLERLMPKAAESGVS----------RPVPQLKRTTMRILIGLLVQNPELAT 466 +LG+ ++ + + +P T + L+ E Sbjct: 417 FRLGVPPEAVRAEFRKASRSKNATPLEVEEAIEIKPSKVPLNTPEHWFLKLIFLQEEGMD 476 Query: 467 LVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 + + + L + + L + + + S + Sbjct: 477 WIHAHLDPNWIQHLTVRQIAVMRLAVHAQGTWQGVATFLNDCESEEMRSLITEASSEERP 536 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLEL---WTLNQELAKK 581 Q D + + + +E + L GL +EERL + ++L ++ Sbjct: 537 IP--NPTQQMNDIVLRLRNQFIERQMAVLAQESGKPGLGDEERLAILVQQQKLRQLKRQ 593 >UniRef50_A8TZS4 DNA primase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TZS4_9PROT Length = 616 Score = 513 bits (1321), Expect = e-144, Method: Composition-based stats. Identities = 190/611 (31%), Positives = 313/611 (51%), Gaps = 37/611 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P+ F+++L R + ++ R L ++G+ F + CPFH++ PS + +K FYH Sbjct: 1 MA--LPQGFLDELRDRVSVSSMVGRRHALIRKGREFVSLCPFHSDSKPSLNIVDDKGFYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CGAHG+ I F+M + L F+E +E+LA + LEVP E + + + ++L +++ Sbjct: 59 CFACGAHGDVIKFVMETEGLGFMEAIEQLAGVAGLEVPKE--TPEERQRAERTRSLQEVV 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D +Y++ L+ + + +YL +RGLS E IARF +G+AP + + Sbjct: 117 DLACRWYERQLRTSIGDAGLRYLRERGLSEETIARFRLGWAPEDRKALQRAMKAEGVEVD 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L++AG++ D G + D R RV+FPI D+RG+VI FGGRVLG+ PKYLNSP+T +FH Sbjct: 177 ILVEAGLVKRYDDGETGDYMRGRVLFPITDRRGKVIAFGGRVLGDGQPKYLNSPDTPLFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KGR LYGL +A++ + L+V EGYMDV+ALAQ GI +VA LGT+ T D I L++ Sbjct: 237 KGRVLYGLAQAREAAHKSGTLVVTEGYMDVIALAQVGIP-SVAPLGTALTEDQIAELWKV 295 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + C+DGD AG+ AA RA + ALP +T G LRF+ LP+GEDPD+L R++G F Sbjct: 296 VPEPVVCFDGDTAGQRAATRACDRALPMLTPGHSLRFIVLPEGEDPDSLTRRDGPSGFRR 355 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ A P+ L+ + + TP+ RA I + T++ E+ ++ Sbjct: 356 LLDAAEPMVDRLWTAEATSGPVDTPERRADFWRRVRERIRVIADRTVQQSYSDEIETRIE 415 Query: 421 ILDDSQLER---------------------LMPKAAESGVSRPVPQLKRTTMRILIGLLV 459 + S+ R + P + + +R L + +I++ ++ Sbjct: 416 AMRPSRQNRSDGRGSAGRGTFKGGKWTPPPVEPPGSRASRARVDTALGQRQQQIILATVI 475 Query: 460 QNPELATLVPP-LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 +P L + L +L+ L RE++ + P L L +H + + T+ Sbjct: 476 HHPGLLDELGETLAHLELGDQFLDKLRREILEITEADPDLDAAGLTDHLKALGYSDTVNG 535 Query: 519 LSMWDDIADK---------NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 L D ++ + A + + + LE + E R ++ + Sbjct: 536 LLGADSLSHAAFARPSATHSEARAGLIELVARVGRGRLERQLAE-ARRIAEESMTEADMD 594 Query: 570 ELWTLNQELAK 580 + L + L + Sbjct: 595 RMMGLRKALQQ 605 >UniRef50_C8WY28 DNA primase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY28_ALIAD Length = 601 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 181/594 (30%), Positives = 269/594 (45%), Gaps = 28/594 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P FI+ L + DIV++I V L+K G+++ CPFHNE+TPSF+V+ E+Q YHCFGC Sbjct: 3 VPETFIDTLRQKVDIVEVISEYVPLRKSGRSYVGLCPFHNERTPSFSVSPERQVYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G FLM+ + + F ETV LA + +P + + R +R Q D Sbjct: 63 GAGGTVFRFLMDIEGISFAETVTLLAERCGIPLPDSLHAPAPRSPRLERYR--QAHDLAA 120 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L A YL RG+S +A F +G+APP ++ + + LI Sbjct: 121 KAFNHILMNTDAGVQALHYLLSRGISRTTMATFQLGYAPPSGRAMMSFLQQKGFSAEELI 180 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 G+ V + G DRFR RV+ PI D+RG+V+ FG R L +D PKYLNSPE ++FHKG Sbjct: 181 ACGLAV-DLGGELVDRFRGRVIIPIADRRGQVVAFGARALDDDAKPKYLNSPEYELFHKG 239 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ ++ A++ R L++EGYMDV+A+AQ GI AVA+LGTS T + QLL + Sbjct: 240 RMLFNVHRARKAIRRERRALLLEGYMDVLAVAQAGIECAVATLGTSLTEEQAQLLKADCD 299 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YDGD AGR A RA+E G + LPDG DPD +R G AFE + Sbjct: 300 KVVIAYDGDEAGRKATVRAIEVLEQ---AGVTPVVLRLPDGMDPDEYIRAHGARAFERML 356 Query: 363 EQAM-PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ FL + + + +P GR L L+++ + Y + L + + Sbjct: 357 SESTWTAVQFLIEDMRARAEWVSPAGRTEFLRQVLRLLAERASPVEQEYQLRNLSQEFNL 416 Query: 422 LDDSQLERLM----PKAAESGVSRPVPQLKRTTM----------RILIGLLVQNPELATL 467 ++ E + P S V + RIL L E A Sbjct: 417 SVETLKEEMRGFAKPLRRRSPPREEVTPWVNSPRAAKGKDQVSLRILQAALFSQ-EAAEY 475 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 + + L + + L QPG ++ L + Sbjct: 476 LMEKGVTELAHPLHTALLSHVYSWRLEQPGQPPSAFIDRLEDEELVRLASSLLFDE---P 532 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIAR-ERTHGLSNEERLELWTLNQELAK 580 I + D L + LE +E + ++E+ L E + Sbjct: 533 PEITVELVEDYLRALELFRLEQELKEKVRAWNEAEAAGDQEKSREIKLQVEWIQ 586 >UniRef50_B8I6N0 DNA primase n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I6N0_CLOCE Length = 604 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 177/602 (29%), Positives = 295/602 (49%), Gaps = 34/602 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P I ++ DIV +I VKL+K+GKNF CPFHNEKT SF+V KQ +H Sbjct: 1 MANLFPDDLIEEIRVSNDIVGIISEYVKLEKKGKNFFGKCPFHNEKTASFSVEPVKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN I F+M+ + LEF + + LA + +P + + ++ L Q+ Sbjct: 61 CFGCGKGGNVIHFIMSIENLEFPDALRFLADRAKILIPDMIEGNRNDEKAGLKRELLQIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F++ +L YL R + +A+F +G+A +D + K + Sbjct: 121 LEAARFFRDNLNNDKNKLPNSYLINRKIQKNTVAKFGLGYAEDRFDTLYKHLKAKGFSDT 180 Query: 181 SLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 S+ ++G+++ + G YDRFR R+MFPI D RG VI FGGRVL + PKY+NSPET+++ Sbjct: 181 SIKNSGLVIYKEESGNIYDRFRGRIMFPIFDIRGNVIAFGGRVLDSSQPKYMNSPETEVY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG+ LY L A+ + RL++ EGYMDV++L Q GI +VA LGT+ T + +LL + Sbjct: 241 HKGKHLYALNFAKNTCSR--RLILAEGYMDVISLHQSGILNSVAPLGTALTENQGRLLKK 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +D D AGR AA+R+L+ G ++ + +P G+DPD ++ G F+ Sbjct: 299 YTEEIVLSFDSDSAGRAAAFRSLDLLNEI---GCNVKVLTIPSGKDPDEFIKAYGVAEFK 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++++ L F SL +D ST +G+ R A+ ++ ++ + ++L +L Sbjct: 356 RLVDRSESLLDFKLGSLKNDIDTSTNEGKVRFLDKAVLILDKIDNNVEKELYVKKLSEEL 415 Query: 420 GILDDSQLERLMPKAAESGVS---------------RPVPQLKRTTMR------ILIGLL 458 G+ S + + S + R +K R +L+ + Sbjct: 416 GVSTQSIFSEMAKQQRNSVIKVRQAASNKNFSRNQIRKSTVVKNQEERLVRLQLMLLATI 475 Query: 459 VQNPELATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 + + + + D + F+ V S+ G+ TG++L A + Sbjct: 476 CLDNSVYFSIKGSFDWDKFDSDEIKKAFKFAVERIESKAGILTGEILNKLS-PGMAESFA 534 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 + I + N + D + ++ LE R+ E+I ++ L+ + LN+E Sbjct: 535 NIVQSQSIFEDNK--KAALDIIRNIDLFGLEERKNEIIELKKRSDLTEGDVEL---LNRE 589 Query: 578 LA 579 L+ Sbjct: 590 LS 591 >UniRef50_B3WEK5 DNA primase G n=8 Tax=Lactobacillus RepID=B3WEK5_LACCB Length = 595 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 160/598 (26%), Positives = 267/598 (44%), Gaps = 25/598 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP ++ +L +I D I V+L+K G+N CPFH E TPSF+VN KQ +HCF Sbjct: 1 MIPEATVDKVLKAVNIADYIGQYVQLRKTGQNLFGLCPFHEEHTPSFSVNEPKQIFHCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN F+M+YD F E V+++A + + + G +Q + L D Sbjct: 61 CGRGGNVFKFVMDYDNATFPEAVKKVADFAGMPLDVQVGHAAPVDPEISKQQ-HILQDTA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + F+ + +A YL KRGL+ + I F +G+AP + ++ + Q Sbjct: 120 DLFHHILMNTEKGQTALDYLHKRGLTDDTIEAFQLGYAPEERNLLVAFLNNRKVDYQDQR 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHK 241 +G+ V + +G+ +DRF +RVMFP+ D G+VIGF GR+L D KYLNSPET +F+K Sbjct: 180 ASGLFVEDQEGKLFDRFNDRVMFPLTDSHGQVIGFSGRILSKDKTQAKYLNSPETKLFNK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L+ L+ A+ D ++ EGYMDV+A Q G+ +AS+GTS T + + ++ + Sbjct: 240 RDVLFNLHRAKADFGRDGGPILFEGYMDVIAAYQAGVKTGIASMGTSLTTEQVDIISHLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + CYDGD G+ A RA+ + Q + LPDG DPD +R G EAF+A+ Sbjct: 300 KRLTVCYDGDEPGQKAIERAVAMLADHPR--LQTDVVVLPDGMDPDEFIRARGAEAFQAQ 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ + +AF+ L VD++ + AL I ++ R ++L + G+ Sbjct: 358 VKSVLTPTAFMLQFLARGVDMNNDQAKLTYLNAALKTIGKISNPVARAVYVKQLADTTGV 417 Query: 422 LDDSQLERLMPKAAE-------------SGVSRPVPQLKR--TTMRILIGLLVQNPELAT 466 + + + L + V++PV + R R L+ + + +L Sbjct: 418 PESALNQSLPAPQQAVPQQSSAPVSYQTAPVNQPVRPIDRYTAAQRQLLYYVWHD-DLVM 476 Query: 467 LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 LF ++ QP L+ + + ++M Sbjct: 477 QRLKNAAFTFPAPHFQTLFTGWLDFLHEQPDGELAGFLDRV-DPDLSGVAASVAMQVLPE 535 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN---EERLELWTLNQELAKK 581 ++ ++ I + G E ++ L + L ++ Sbjct: 536 ATEATIDELIQTITSASTVERLQAIKQAITEAQRLGDKQKLGELTVQYVNLMKLLKQQ 593 >UniRef50_A1TYD8 DNA primase n=3 Tax=Marinobacter RepID=A1TYD8_MARAV Length = 583 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 240/589 (40%), Positives = 334/589 (56%), Gaps = 30/589 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G IP+ F+ DLL R D+ +LI +R+ LKK G N+ ACCPFH+EKTPSF V +K FYH Sbjct: 1 MSGLIPQRFVEDLLDRIDLAELIGSRITLKKAGANYKACCPFHDEKTPSFNVRPDKGFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F+ ++ L F E VEELA LEVP++ ++ E Q +TL + Sbjct: 61 CFGCGAHGDAISFVREFEGLGFTEAVEELAKRAGLEVPYDRA---AKQEMQQARTLTDAL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + N FY +L AR YL++RGL +I ++ IGFAP + + Sbjct: 118 EFANRFYHSALTSQQGGYARDYLKQRGLDENIIQQYQIGFAPGTGTALYDAAPKD----- 172 Query: 181 SLIDAGML----VTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPET 236 + A ++ V++ GR D FR RVMFPIR+ RG+ I FGGR LG+D KY+NSPE+ Sbjct: 173 --LKAPLIETRTVSDQYGRPRDLFRNRVMFPIRNTRGKTIAFGGRTLGDDKAKYINSPES 230 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 D+FHK R++YGL+EA+Q + ++LLVVEGYMDV+ALAQ+GI+YAVA+LGT+T D + Sbjct: 231 DVFHKSREIYGLFEARQAIRQLDKLLVVEGYMDVIALAQHGIHYAVATLGTATNQDSLTA 290 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R +++ C+DGD+AG AA RA+E AL M DG L+F+ LP+GEDPDTLVRKEG + Sbjct: 291 LLRHVRHIVFCFDGDQAGFRAADRAMENALELMADGLHLQFLMLPEGEDPDTLVRKEGPD 350 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 AF+ R+E A P S +LF+ +DL P+ R L PL++++P TLR + E+ Sbjct: 351 AFQKRIEGATPFSRYLFDRQSEGLDLQLPEHRGELRARVEPLLNKMPRSTLRDAMWHEML 410 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI---------LIGLLVQNPELATL 467 G + Q + G R Q + T RI L L++ PELAT Sbjct: 411 RLCGGRNQWQNRQQGRNYKARGW-RGEGQSRPTEERIDVKLSKDSTLCLALLEAPELATE 469 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 V L + R L+ + T + L TN A +++D++ Sbjct: 470 VKALADSTRQLERAGRFARWLLE-----EKIQTRKTLVAGLATNKQARDRFYNLFDELEH 524 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERT-HGLSNEERLELWTLN 575 E T + + + RQ+ L R LS EER EL TL+ Sbjct: 525 IPARESTLAAARELLSPNEEAARQQRLATLLRNLAQLSPEEREELRTLS 573 >UniRef50_B4CWV5 DNA primase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CWV5_9BACT Length = 602 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 171/598 (28%), Positives = 279/598 (46%), Gaps = 25/598 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ IP I ++A D+VD+I LK+ G + A CPFHNEKTPSFTVN ++Q + Sbjct: 1 MS-LIPPEIIEQVIAANDVVDVIGGYFPLKRSGPVYKAICPFHNEKTPSFTVNPQRQIFK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GN + F+MNY+ L+F+ V++LA +++ S E + L L Sbjct: 60 CFGCGAGGNVLRFVMNYENLDFLGAVKKLAERAGIKIEQTELSAEQAAEYSMLRRLLALH 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+ L ++P A AR YL+ RG+ +V + +G+AP WD + + Sbjct: 120 AEAADFFHWHLMKKPSAQIARDYLKSRGIGADVARAWKLGYAPDEWDAMRDFADSRGFSD 179 Query: 180 QSLIDAGMLV----TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNS 233 + L+ +G++ N + YDRFR RVMFPI VI F GRVL KY+NS Sbjct: 180 EELVASGLVKLRDEENPRSEFYDRFRARVMFPICKDTDEVIAFSGRVLQADAKAAKYVNS 239 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PET +F KG L+GL ++++ E +V EG +D++ ++G+ +A GT+ T Sbjct: 240 PETMLFKKGAVLFGLNKSKRALIEAKSAIVCEGQLDLITAFEHGVQNVIAPQGTAFTEKQ 299 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 +L R V+ C+D D AG AA R+L + L + +R +P GEDPD+++R + Sbjct: 300 AHILKRFVEEVVLCFDADVAGEKAAERSLASLL---AENLLVRVAGMPQGEDPDSMIRGK 356 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G +AF ++ A + + ++ D +TP G+ + IS + LR + Sbjct: 357 GADAFREQIAGARDFFDYQLDRMVAGPDFNTPRGKMQAVRKMAEFISLIRDSVLRETVMN 416 Query: 414 ELGNKLGILDDSQLERLMPKAAESG--------VSRPVPQLKRTTMRILIGLLVQNPELA 465 + +L I + L +++ + P P + +T+R+L + +++ Sbjct: 417 RVTQRLEISAQEFVRLLKAPPSKTPDPLSTVTATAPPDPFAEDSTIRLLATVALRDAAAR 476 Query: 466 TLV--PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 + P +++ ++L L + L + + T AA L Sbjct: 477 EWLLAEPWDSVLRDQLDAELLVKILRADIQPDDDASVHVFMTTLSATEEAAISGLLEEKM 536 Query: 524 DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 D + + R E AR RT L + ER E+ +L K+ Sbjct: 537 LAHPMT----IVHDCWRELERRKIRHRVEATQARLRTPDLPDTERAEMLKEILDLQKR 590 >UniRef50_B9KY77 DNA primase n=2 Tax=Thermomicrobia (class) RepID=B9KY77_THERP Length = 616 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 172/604 (28%), Positives = 280/604 (46%), Gaps = 35/604 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R + + DIVDLI ++L+K GKNF A CPFH EKTPSF V E Q ++CFGC Sbjct: 1 MGRQDVERVREAIDIVDLIGGYIQLRKAGKNFKALCPFHQEKTPSFYVFPETQSFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G+AI FLM ++L+F + +E LA + + + E QR+ L +L Sbjct: 61 GASGDAISFLMRIEQLDFRDALERLAERAGITL--SPPRPEERAEDEQRRRLAELNRLAA 118 Query: 125 TFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++ L +AR YLE+RG+ RF +G+AP + + + + L+ Sbjct: 119 AWFAHVLWGTSFGEAARSYLERRGIDRPTAERFGLGYAPDAPSALARYLSQHGAGPEELV 178 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG++V D G DRFR R++FPIRD+ G ++GFGGR LG PKYLNSP+T +F KG Sbjct: 179 TAGLVVRRDDGSLVDRFRNRLIFPIRDRHGTILGFGGRTLGEAQPKYLNSPQTPLFDKGS 238 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LY + A++ + +VVEGY+D + Q+G + VASLGT+ T + L R Sbjct: 239 VLYAIDLAEESIRQQRTAIVVEGYLDAITAHQFGYSNTVASLGTALTERQGRHLRRLAER 298 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDG------------------RQLRFMFLPDGED 345 ++ D D AGR A R LE + +G +L + LP+G D Sbjct: 299 ILLALDADVAGRQATLRGLELLRHALAEGERAVVDPRQLIRFERTLDVELAVVVLPEGLD 358 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD L+R++ + ++ + A+PL + + L+ + + P L PL+ ++ Sbjct: 359 PDDLIRQD-RTRWDEALAHAVPLVDYYLDVLLGEQPPANPRAATALLQRIAPLLLELGDL 417 Query: 406 TLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK------RTTMRILIGLLV 459 + + +L + +++ L + +T + +GLL+ Sbjct: 418 VQVDLYTRSVAARLRLPEETVRRLLASLRRQPTREPSPKTTAAAILRPLSTEQQFVGLLL 477 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 + PE A + +L+ +RELV+ L+ L L E R ++ Sbjct: 478 RYPEAAAHLVGEIDLESITDAR---YRELVSLLLAGQPLDDAALAEDLRDD-IGQLRQRF 533 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGL--SNEERLELWTLNQE 577 + D+ +A Q ++ + + R L++ R +E L + Sbjct: 534 ATQPDL-PVPLARQAIREAFRRLRRERHDERLRSLLSEVRDAEERGDRDELRRALELIEA 592 Query: 578 LAKK 581 L ++ Sbjct: 593 LKQR 596 >UniRef50_P52308 DNA primase n=40 Tax=Lactobacillales RepID=PRIM_ENTFA Length = 628 Score = 510 bits (1314), Expect = e-143, Method: Composition-based stats. Identities = 171/626 (27%), Positives = 275/626 (43%), Gaps = 51/626 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP+ I ++ RT+IVD+I V+LKK GKN+ CPFH E++PSF+V +KQ +H Sbjct: 1 MAQRIPQEVIEEVRHRTNIVDIIGQYVQLKKSGKNYMGLCPFHEERSPSFSVAEDKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS---QIERHQRQTLY 117 CFGCG G +FL + + F E+V+ +A + +L V F+ E QR++L Sbjct: 61 CFGCGKGGTVFNFLQEIEGISFPESVKRVADLEHLSVDFDWSEPREVADTPENQQRRSLL 120 Query: 118 QLMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 QL Y L + A YL +RGL+ E+I F IGFAP D + + F Sbjct: 121 QLHSKAAELYHHILVNTKIGEPALNYLLERGLTQELIETFQIGFAPQKRDFLSQVFKNEQ 180 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL------GNDTPKY 230 + +G+ V D G DRF +R+MFPI D +G VI F GR+L G++ PKY Sbjct: 181 LDETLFEPSGLFVQRDNGTFLDRFYQRIMFPINDPQGNVIAFSGRLLKTADFPGDEMPKY 240 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 LNSPET +F+K L+ A+++ + N +L+ EG+MDV+A Q G+ VAS+GTS T Sbjct: 241 LNSPETTLFNKRETLFNFDRARKEIRKENTVLLFEGFMDVIAAWQSGVKSGVASMGTSLT 300 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 + I+ L R V+ CYDGD AG A RA++ L + +P+ DPD V Sbjct: 301 NEQIRRLERVAKEVVICYDGDNAGVQATNRAIQLLQE--NSHFDLSIVSIPEKLDPDEYV 358 Query: 351 RKEGKEAFEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 RK G EAF+ + +F N +++ + L ++ V R Sbjct: 359 RKYGAEAFQNLANHGRETVFSFKMNYHRLTRNMNNEKEQLDYVNELLRELTNVQSPLERD 418 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK---------------------- 447 ++ + + S E+ E + + + Sbjct: 419 RYLNQIAQEFQLSVHSLEEQFNQLKQEQRSVQRQERQQFYQDEMMPPPMEEPVFEENHVQ 478 Query: 448 --------RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLT 499 + R L+ L+ + + L + L+ L + Sbjct: 479 NKLPLTQVQKAERSLLFRLMNEQGVRQTIQQLPDFSFAHDEYQELYFLLESYATLHQSFD 538 Query: 500 TGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + + +++ + + +E+ D L+ + S + E+ +++ Sbjct: 539 IADFINFLQDNQTKQLAIEIAYQN--LSEESSEREVADLLHVIALSSIAEAIEQKKIQQQ 596 Query: 560 T------HGLSNEERLELWTLNQELA 579 L E +E+ L ++L Sbjct: 597 EAKRVGNQQLEAELTMEIIQLARQLK 622 >UniRef50_B1XVY9 DNA primase n=2 Tax=Polynucleobacter necessarius RepID=B1XVY9_POLNS Length = 652 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 216/653 (33%), Positives = 328/653 (50%), Gaps = 77/653 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP+ FI DLL R DIVD++ VKLKK G NF CPFH+EK+ SF+V+ KQFYH Sbjct: 1 MA-LIPQSFIADLLNRVDIVDVVGQHVKLKKAGANFQGLCPFHSEKSSSFSVSPTKQFYH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI FLM Y L +V+ +E+LA L+VP E + + Q L ++M Sbjct: 60 CFGCGAHGSAISFLMEYSGLGYVDAIEDLARSAGLDVPREERTANDVARQQQAMALSEVM 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG--GNPEN 178 +Y+Q L+ T A +YL+ RGL+ E+ R+A+G+AP GW + FG N E Sbjct: 120 SSAADWYRQQLKG--NTRAVEYLKGRGLTGEIAKRYALGYAPDGWQGLETVFGAYSNDEV 177 Query: 179 RQSLIDAGMLVTNDQG------RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLN 232 ++L+++G+L+ ++Q + YDRFR+R+MFPIR+ +G+ IGFGGR+L PKYLN Sbjct: 178 AKTLLESGLLIQSEQAEGSQSMKRYDRFRDRIMFPIRNPKGQTIGFGGRILDQGEPKYLN 237 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET +F KG LYGL+EA+Q +LV EGYMDVVALAQ G AVA+LGT+ TA+ Sbjct: 238 SPETPLFSKGNTLYGLFEARQAIRAQEYVLVCEGYMDVVALAQLGFPNAVATLGTACTAN 297 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 H+++L R T+ V+ +DGD AG+ AA RALE LP M+D +++ F+FLP DPD+ VR Sbjct: 298 HVRMLLRQTDKVVFSFDGDSAGQRAAQRALEACLPLMSDDKEIHFLFLPTEHDPDSYVRA 357 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G AFE +++A +S+F F + +L+TP+GRA A PL+ +P LR + Sbjct: 358 YGAPAFEKVIKEATSISSFFFKVVSEGHELTTPEGRAHTHHAAKPLLLSMPPIALRTQIL 417 Query: 413 QELGNKLGILDDSQLE----RLMPKAAESGVSRP-------------------------- 442 +EL + + P +P Sbjct: 418 RELAIRTNTTPAELEAFCGLTVAPAPVRQTTYQPMQARTPGGHNQSAFSGIGNRQGAPWQ 477 Query: 443 ---------------VPQLKRTTMRILIGLLVQNPELATLVP------PLENLDENKLPG 481 P+ ++ +++Q P L + L+ ++ Sbjct: 478 ASKGSAKRVATQNIEPPKAPTDLAEQMLRVIIQFPHLGKALDANKRALALKAAEQRSEKA 537 Query: 482 LGLFRELVNTCL---------SQPGLTTGQLLEHYRGTNNAATLEKL------SMWDDIA 526 L ++ + C ++P ++ + + L L + Sbjct: 538 HALMKDFLAQCDLVELIPGEGNKPATVGAGAFAMFQDQLSRSELAPLYEVLRNRVMGSDL 597 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + A + + L+ E+ + + +++ L ++L Sbjct: 598 EIEGAAADLDGAFKKLELIHLKQEMTEIAQKIAGGTATEQDKARYRELGEKLK 650 >UniRef50_D0MHB3 DNA primase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHB3_RHOM4 Length = 619 Score = 509 bits (1312), Expect = e-143, Method: Composition-based stats. Identities = 185/606 (30%), Positives = 284/606 (46%), Gaps = 43/606 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I + DIV+++ V L+++G N+ CPFH EKTPSF+VN + CFG Sbjct: 2 RIPEETIEAIRTAVDIVEVVGEYVSLRRRGANWFGLCPFHEEKTPSFSVNPHLGIFKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+ F+ + + FVE V LA + +P + R LY + Sbjct: 62 CGRGGDVFAFIQQIEHVSFVEAVRMLAERAGIPLP-----DGEEEADDPRPALYHALRFA 116 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY + L Q AR YL++RG+ E + RF +G+AP WD +LK + L Sbjct: 117 ARFYFEQLTQSEAGQVARAYLKQRGIHPEAVRRFGLGYAPNAWDALLKAATEAGIRPEVL 176 Query: 183 IDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 AG+++ ++G YDRFR R+MFPI GRV+GFGGR+L + PKY+N+PET ++ Sbjct: 177 EQAGLVLPRKERGGYYDRFRHRLMFPIFSHTGRVVGFGGRLLEPDPEQPKYINTPETPVY 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR LYGLY+A+Q ++VEGY DV+AL Q GI + VA+ GT+ T D +LL R Sbjct: 237 HKGRILYGLYQARQALRTQEEAILVEGYTDVIALHQAGIEHVVATSGTALTPDQARLLAR 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ +D D AG+ AA R++E L G + + LP GEDPD+ VR +G AF+ Sbjct: 297 YVRRVVLLFDADAAGQQAALRSIELFLE---RGLNVYVVSLPPGEDPDSFVRAKGARAFQ 353 Query: 360 ARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + Q F + Q L TP+G A ++ + I+++P LR + Sbjct: 354 EYLRQRRRDFVTFHYELARRQGRLDTPEGEAEVARTIVSAIARLPDPLLREPYVRRAAEL 413 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLK-----------RTTMRILIGLLVQ--NPELA 465 L I LE L + S P P R+L+ L+++ P +A Sbjct: 414 LRIQQVRLLEILEAQLTPSSREAPPPAPSPSTPPPTSPTWHEAERLLVRLMLEEGRPMVA 473 Query: 466 TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDI 525 ++ + + + P L L+ + L Y T+E L + Sbjct: 474 FVLGHMALEEFTEGPPRQLIARLLEQYEAGAVDARPFLEGRYGPEVQRLTVEALMEPYEP 533 Query: 526 ADK------------NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGL-SNEERLELW 572 ++ + A + D++ + R +E+I R + L + + + Sbjct: 534 SENWERKGISVPRLRDRAYEAAADAMVRLKL----QRIDEMIHRLKEEQLRTRHDEARVR 589 Query: 573 TLNQEL 578 + L Sbjct: 590 EIIARL 595 >UniRef50_B1HTI3 DNA primase n=5 Tax=Bacteria RepID=B1HTI3_LYSSC Length = 610 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 158/601 (26%), Positives = 272/601 (45%), Gaps = 30/601 (4%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 AG+IP I + ++DIVD+I ++L K+G+N+ CPFH E+TPSF+V+ +KQ +HC Sbjct: 6 AGKIPEEVIEQIRTQSDIVDVISEYMQLTKRGRNWFGLCPFHGEQTPSFSVSSDKQIFHC 65 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ-RQTLYQLM 120 FGCGA GNAI F+M+ + + F + V +L + + E + + + + + Sbjct: 66 FGCGAGGNAITFVMDIEGISFPDAVVKLGERAGIHLDVEPTFPGGTKKISKAEERMKEAH 125 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+ L YL +RG + E+I IG++ P +D + N Sbjct: 126 AFTADFFHHLLLNTEDGEEPLNYLLERGFTRELIESNNIGWSLPSFDALTILLERKGYNL 185 Query: 180 QSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 Q + ++G+++ + + R +DRFR R+MFPIRD+ G++I F GR+L + KYLNSPE+ Sbjct: 186 QEMAESGLIIKREGEERYFDRFRGRIMFPIRDENGKIIAFSGRILSSTGEEAKYLNSPES 245 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF K LY L +A+ + +++++EG+MDV+A G+ AVA++GTS T HI Sbjct: 246 PIFQKSEVLYNLDKARTSIRKNRQVVLMEGFMDVLAANSVGVMNAVATMGTSLTNQHITK 305 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R V CYDGD AG DAA RA + T+ ++ LP+ DPD +R G + Sbjct: 306 LKRLVEQVTICYDGDNAGFDAAKRAAQLL---HTERMKVDIAVLPEKLDPDEYIRTLGGQ 362 Query: 357 AFEA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF+ +E AF+ + + + L ++ R ++L Sbjct: 363 AFKEQILENPHAYIAFMMMHARRNKNFQFENDTLQYIQEVLEQLTGRSSPVERDLYIRQL 422 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVP-----------------QLKRTTMRILIGLL 458 N+ I +++ + A S R+L+ + Sbjct: 423 SNETNISEEAIYAQFRKLEANQVRSAKPEMPTQMPSMPVTQQQKPMDAAERAERLLLAHM 482 Query: 459 VQNPELATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 + N ++ V E + + + +F LV + +E + Sbjct: 483 LHNIDVVDRVLRSEQKEPFVRDAYMAVFVRLVGFYEEYGHPDYQRFMEILDDAELRKIVM 542 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 + ++ + D + AE DS+ + +E + + + E + Q+ Sbjct: 543 EAALVE--RDPDQAEAEVVDSIRQLQKYRIEQEIYQKMHESKEAEK-MHEYARALEIAQQ 599 Query: 578 L 578 + Sbjct: 600 I 600 >UniRef50_Q2W9H3 DNA primase n=2 Tax=Magnetospirillum RepID=Q2W9H3_MAGSA Length = 623 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 203/600 (33%), Positives = 283/600 (47%), Gaps = 36/600 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P F+++L AR + ++ RVKL ++G+ CPFHNEKTPSFTVN +K F+H Sbjct: 1 MA--FPPQFLDELRARIPVTSVVARRVKLVRKGREHQGLCPFHNEKTPSFTVNEDKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F M L F E VE+LAA +EVP S ++ +R +L+ + Sbjct: 59 CFGCGAHGDAIGFEMRAGHLSFTEAVEKLAAEAGIEVP--KASPEERVREQRRASLHDAL 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + + F+++ L+ P YL+ RGLS + IARF +GFAP + + Sbjct: 117 EAASAFFEKHLRGPAGRDGFAYLKNRGLSDDTIARFRLGFAPDSREALKSALMSKECPES 176 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 LI+AG+L + G S+D FR RVMFPI D+RGRVIGFG R LG+ PKYLNSP+T +FH Sbjct: 177 LLIEAGLLKKPESGASFDYFRGRVMFPITDRRGRVIGFGARTLGDGQPKYLNSPDTPLFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYGL A++ E NR++VVEGYMDV+AL Q G YAVA LGT+ T I+ L+R Sbjct: 237 KGQTLYGLAHAREMARELNRVVVVEGYMDVIALHQAGFAYAVAPLGTAVTEQQIEELWRL 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 I C DGD+AG+ A RALE A P + G+ LRF LP EDPD+L++ G A A Sbjct: 297 APEPILCLDGDKAGQRAMERALERAFPILKPGQSLRFATLPAPEDPDSLIKARGPAAMAA 356 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ A PL + L TP+ RA L + ET+R K+ Sbjct: 357 VLDAAQPLVEVAWRVATQDRPLDTPERRALLEKELSDKAFSIADETVRYQYLATFRQKIK 416 Query: 421 ILDD----------------SQLERLMPKAAES-----------GVSRPVPQLKRTTMRI 453 R P G RP + Sbjct: 417 ESFRPPPRPWTNAGGGKMGGKGFGRFRPDPQAPLKGPDGMLPGVGRPRPPRPNAGAQEWM 476 Query: 454 LIGLLVQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNN 512 ++ L++ +P L + L R ++ + L L + R Sbjct: 477 MLTLVLDHPRLMDSIGERLGETTFADKTLDNLRRGILKHLGAARDLDADGLATYLRTDGY 536 Query: 513 AATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELW 572 + L+ L A++ D E ++ +S Sbjct: 537 SEILDSLLD----ANERRVRALRDDLSTEEARIHWEHVYNLYTRKDLLADVSEANAELAQ 592 >UniRef50_D1KB92 DNA primase n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KB92_9GAMM Length = 611 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 239/616 (38%), Positives = 334/616 (54%), Gaps = 47/616 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I FINDL + DIVDLI+ RV LKK GK++ ACCPFHNEKTPSFTV +KQ+YHCFGC Sbjct: 4 INNDFINDLSNQVDIVDLINRRVPLKKAGKDYKACCPFHNEKTPSFTVVADKQYYHCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G +GNAIDF+M +D L F+E VE +A + V ++ ++ + + LM ++ Sbjct: 64 GENGNAIDFVMKFDHLNFIEAVEVVAGESGVSVVYDQN---ARPVDPKMKRYRDLMQEVS 120 Query: 125 TFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FYQ L+ P Y + RGL+ E+ RF +GFAPPGW ++ F N E + L Sbjct: 121 EFYQSQLKKSPAKKKVVTYAKNRGLTGEIAKRFDLGFAPPGWSSLFDHFKHNLEVVKDLE 180 Query: 184 DAGMLV--TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFH 240 + G+LV +G YDRFR+R+MFPI + +G +I FGGRVL D PKYLNSPET IFH Sbjct: 181 EMGLLVAKKEKKGEYYDRFRDRLMFPIHNAKGDIIAFGGRVLSEEDKPKYLNSPETPIFH 240 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R+LYGL+ A++ + + +LVVEGYMDVVAL Q GI VA+LGT+TT +H+Q L R Sbjct: 241 KSRELYGLHHARKHSRSIDYILVVEGYMDVVALHQSGITCTVATLGTATTPEHLQTLSRT 300 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T+ +I C+DGDRAGR AAW+AL+ ALP + G ++F+FLPDGEDPDTLV+KE +AFEA Sbjct: 301 TDTIIFCFDGDRAGRAAAWKALQIALPVIKSGLIVKFLFLPDGEDPDTLVKKESSKAFEA 360 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 R+E++ PLS FLF+ + +VD T +G+ LI QV +T + L + + ++G Sbjct: 361 RIEKSHPLSKFLFDHIKVEVDFDTIEGKTLFLEKVSILIQQVEYDTYQQQLIEGVAQEVG 420 Query: 421 ILDDSQLERLMPKAAES----------GVSRPVP------------------QLKRTTMR 452 + L + G PVP + M Sbjct: 421 QSVEQVKRVLSQQKLPPLKPSTPAPIVGEEMPVPDFPDFPDFSLSKPIVVKNNNAKGLMS 480 Query: 453 ILIGLLVQNPELAT-----LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY 507 +I LL+ P L+ + L+ +D+ L L + L Sbjct: 481 KMITLLLNYPSLSDGTVEVRIRDLKKMDKKFAVLLEL-TRSSQMIEQENNFQEELLKPFK 539 Query: 508 RGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 T L +L + + + A+ F +L D + ++ + EE Sbjct: 540 NKTTTYNRLGQLCIMEPHLSEMQAKDEFLAAL----DVSEQQQKNTQNKASIATANTIEE 595 Query: 568 RLELWTLNQ--ELAKK 581 R +L Q +L KK Sbjct: 596 RKKLMESIQKGKLKKK 611 >UniRef50_Q02AB5 DNA primase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AB5_SOLUE Length = 580 Score = 509 bits (1311), Expect = e-142, Method: Composition-based stats. Identities = 162/578 (28%), Positives = 282/578 (48%), Gaps = 16/578 (2%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+ L + DIV +I V+L++ G + CPFH+EK+PSFTV+ QFY CF CGA Sbjct: 2 DFVEQLKSSVDIVSVIGEYVRLRRSGTQRYMGLCPFHDEKSPSFTVHVVHQFYKCFSCGA 61 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ + F+M + + F E ++ L+ + + +P S + + R +L + + Sbjct: 62 GGDVVKFVMEKEGISFYEALKSLSERYGIPMPKR--SQYADEDSKLRGSLLVMHELAAEN 119 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 ++ +L+ +AR Y+ +RGL+ E + F +G+A +++ F + + +G Sbjct: 120 FRDNLKSQAGDNARAYIAQRGLAPETVEHFGLGYADRSGRALVRLFEQREFSVAQMEQSG 179 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKGRQL 245 ++ G YDRFR R+MFPI +++G++I FGGR L +D PKYLNSPETDI+ K L Sbjct: 180 LVGKRQDGSLYDRFRNRLMFPIHNEQGKIIAFGGRALSPDDEPKYLNSPETDIYKKSHVL 239 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 Y L+ A+Q + +R ++VEGYMDV+ + G + VA GT+ A +Q + R T+ + Sbjct: 240 YNLHRAKQGIRKEDRAILVEGYMDVIGVTAAGFHNVVACCGTAFGAQQVQAIKRHTHRIA 299 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 +D D AG A+ R+L+ L +G Q+R + L G DPD ++ G EA++AR++ A Sbjct: 300 VNFDPDAAGAGASERSLDLLL---AEGMQVRIVELDGGLDPDEYCKERGTEAYQARIDGA 356 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 +L + + D+ T +G+ + LP + + R+ + ++ +G+ Sbjct: 357 KGYFYWLADRARAKHDMRTSEGKVAVLNFLLPKVQNIADSLERMTVANDVAGYIGVDQGM 416 Query: 426 QLERLMPKAA---ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE-NKLPG 481 L+ A+ E + RP L+ +LI LL + A L+ ++ L+ LP Sbjct: 417 VLDHFKKAASDRNERAIPRPANPLRHDERMLLIALLTHSEGRAELIEQMKVLETIETLPS 476 Query: 482 LGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNH 541 +F+ + + + +L + + + D + +SL Sbjct: 477 RRIFQAVFALDEAGGRIGFEELNSRLEEADQNLLAQAVLNEDGEISPEEVAASV-ESLRR 535 Query: 542 MFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 L L+ + I+ G + E L EL Sbjct: 536 SEQQYLRLQLKARISESERAGKFD----EAVRLTMELQ 569 >UniRef50_Q38X97 DNA primase G n=1 Tax=Lactobacillus sakei subsp. sakei 23K RepID=Q38X97_LACSS Length = 627 Score = 509 bits (1310), Expect = e-142, Method: Composition-based stats. Identities = 159/626 (25%), Positives = 267/626 (42%), Gaps = 52/626 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG+IP I+++ ++T+IVD++ V+LKK GKN CPFH+EKTPSF+V+ EKQ +H Sbjct: 1 MAGKIPNEVIDEIRSQTNIVDVVGQYVQLKKAGKNLFGVCPFHDEKTPSFSVSEEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN FLM +++ F E + ++A + + E + QL Sbjct: 61 CFSCGRGGNVFKFLMELEQISFPEALTKVADFAGVTLADSYKPTAVHRESSEVTQFKQLY 120 Query: 121 DGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 N ++ L A YL +R ++ +I F+IG+ P D +L F Sbjct: 121 QQANELFKHILTSTVAGQPALDYLHERQMTDALIETFSIGYLPDQSDLLLTFFQNKDIPY 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETD 237 Q L +G+ + G+ +DRF RVMFPIR+ +G VI F GRVL D PKYLNSPET Sbjct: 181 QVLRQSGLFIETQTGKLHDRFSGRVMFPIRNAQGEVIAFSGRVLTKQPDQPKYLNSPETV 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K + L+ A+Q + ++ + EG+MDV+A + VAS+GTS T + + LL Sbjct: 241 IFNKRKVLFNYDLAKQTIHQSKKVYLFEGFMDVIAAYSADVVNGVASMGTSLTTEQLNLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + ++ CYDGD+ G +A RA+ + T +L + LP G DPD VR+ G Sbjct: 301 AQQAQELVVCYDGDQPGIEAMKRAINLLQQHTT--LELSVVVLPGGVDPDEYVRQYGGPQ 358 Query: 358 FEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+ ++ AF L ++L + AL ++++V +++ Sbjct: 359 FKETLQNGTETPIAFELRYLKQGLNLDNEKDQLDYVQQALEVVARVESPLAIEVYLKQVE 418 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRT--------------------------- 449 GI D+ +L + P+ Q+ + Sbjct: 419 ADSGITLDTLKRQLQTVRVKHATQVPINQVGQPEAPPYFDDFQAPPLPPEEMAGAFGDPR 478 Query: 450 ----------------TMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCL 493 + ++ +L+ N ++ + + P L+ + Sbjct: 479 TIAPKRQPKRLTRIEHAEQEILHMLIHNEDVRLQLENNADFSFVHTPYQLLYELWRSFIA 538 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEE 553 + ++ + + ++ D L + + ++ R +E Sbjct: 539 EGQPADIAGFTSYIPDDLQQLVVQ---IDLLDLPEEANQEALNDCLAVIGKNSIQERLKE 595 Query: 554 LIARERTHGLSNEERLELWTLNQELA 579 + EL N+ + Sbjct: 596 AKIALKEATKLGNHSEELRLTNEVIQ 621 >UniRef50_Q2LVF2 DNA primase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LVF2_SYNAS Length = 594 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 171/597 (28%), Positives = 284/597 (47%), Gaps = 25/597 (4%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 G P I ++ +R DIV+LI + LKK GKNF CPFHNEKTPSFTVN EKQ Y+C Sbjct: 3 KGDHPGDKIAEIKSRIDIVELISEYISLKKAGKNFLGLCPFHNEKTPSFTVNREKQMYYC 62 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCG G+ FLM F +T++ LA + +P + G + + + R+ + Q+ Sbjct: 63 FGCGEKGDVFAFLMRLHNTTFPDTLKLLARRTGVILPTSSFRGDGKSQLNAREQIIQINQ 122 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 +Y+ +L P +A YL++RGL I F++G+A GW + ++ + Sbjct: 123 IAAAYYKDNLFSPGGKAASSYLKERGLKESTIEVFSLGYALDGWRYLRNHLERKKQSLKM 182 Query: 182 LIDAGMLVTNDQ--GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +AG++V D YDRFR R+MFP++D GR+I FGGR+LG+ PKYLNSPE+ + Sbjct: 183 AGEAGLIVAKDDRPDVLYDRFRNRLMFPVKDVDGRIIAFGGRILGDGEPKYLNSPESPAY 242 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KGRQLYGL A+++ +++VEGY D++ L GI VA+LGT+ T DH+ L+ R Sbjct: 243 IKGRQLYGLNLAKEEIRRCGYVILVEGYFDLIVLWNAGIKNVVATLGTALTKDHVALIRR 302 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T+ V +D D AG+ A R++E ++ R + LP+G DPD VR+ G EA + Sbjct: 303 YTDQVAITFDSDEAGKKALARSVEM---FIAAHMDARAVVLPEGLDPDDFVRRYGGEALK 359 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E A + + + + + + + + R + A I+ + R + + KL Sbjct: 360 RMVEGAPSIVDYYIENAIGRGN--SFEERGGAAARAAAFITGIQDVIDRNLFIKRVAEKL 417 Query: 420 GILDDSQLERLMPKAAESGVS------RPVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 GI D + + + + + +I L+++ P++ + + Sbjct: 418 GIDQDILKKEVQRRLRSNARKEFLTPVQQREAAYSGLELNMIHLMMEYPDVIPSILSSKA 477 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQ---LLEHYRGTNNAATLEKLSMWDDIADKNI 530 ++ L L + + G ++ + +L + K Sbjct: 478 MEYFINRDLRLIGQSWIDYAVNETVNPGDAVSFIQKLDNPDIEDIFLRLFVKGSPFQKEQ 537 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE---------ERLELWTLNQEL 578 + +D + + + + + + R S + E+ L +EL Sbjct: 538 LDSITSDMIRQVKRRWYKEQHKNIKNRLLNAQASGDQALGRELLKEKERLMREEREL 594 >UniRef50_Q1NI78 DNA primase n=4 Tax=Deltaproteobacteria RepID=Q1NI78_9DELT Length = 599 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 177/586 (30%), Positives = 277/586 (47%), Gaps = 15/586 (2%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R + + DI ++I V L++ G N CPFH EKTPSF VN + +HCFGCG Sbjct: 18 RETVRLVKETADIAEVIGEHVTLQRAGANLKGLCPFHAEKTPSFMVNPGRGSFHCFGCGE 77 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ FLM Y ++ F E +++LAA +++ + + S + E QR+ LY + Sbjct: 78 GGDVFSFLMLYHRVGFPEALKQLAARYHIPLAETSLSPQQREEARQREALYAINARAAAL 137 Query: 127 YQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y + L P A ARQYL +RG++ +I RF +G+APP WD + K + A Sbjct: 138 YHRFLLHDPAADQARQYLAQRGMTAAIIERFQLGYAPPRWDFLRKTLEREKFTPATAAQA 197 Query: 186 GMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L + + G YDRFR+R++FPI D+ GRV GFGGR+LG PKYLN+ ET IF K R Sbjct: 198 GLLASKESGGGHYYDRFRQRIIFPIIDQTGRVAGFGGRILGEGEPKYLNTAETPIFDKSR 257 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL++ + + L+VEG D++ALA G+ VA LGT+ TA +++L Sbjct: 258 ILYGLHQHRDALRKARSCLLVEGNFDLLALAAGGVEEVVAPLGTALTAGQLRILRGYVEE 317 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ +DGD AG AA RA+ L G R LP G+DPD+ +R G++ + + Sbjct: 318 VVLLFDGDSAGLKAAMRAVPLFLAEKLSG---RVAVLPQGQDPDSYIRAHGRQGLQELLA 374 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE-TLRIYLRQELGNKLGIL 422 + L+ F+F+ L + L +G+ R+ P++ ++ + LR +LGI Sbjct: 375 EGQSLAEFVFSRLAAEHGLG-VEGKNRIIAELAPMVHELNDQHLLRTRFIAHFSERLGIS 433 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKR-----TTMRILIGLLVQNPELATLVPPLENLDEN 477 + + AA V+ P + R + L + + + Sbjct: 434 SQQFGQSIGRPAARRPVATPPAEAGEEWQLTANERRIFAFLFLHGQYLPDFLAAGLQEYV 493 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 EL+ + LLEH G + L D + E + + Sbjct: 494 SGRAARALLELMISQQQDFINAPEVLLEHTEGRLKSLVSSLLIDGADFYPEEQQEASAQE 553 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEER--LELWTLNQELAKK 581 ++ + E L+ L+ +++ +EL Q L K+ Sbjct: 554 LISWLQRHRRRREAEALVQEINAAHLAGDQQKVMELMLKKQTLQKE 599 >UniRef50_A8SUG2 Putative uncharacterized protein n=1 Tax=Coprococcus eutactus ATCC 27759 RepID=A8SUG2_9FIRM Length = 600 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 162/605 (26%), Positives = 266/605 (43%), Gaps = 48/605 (7%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 IN++L+R DIVD+I + LKK+G N+ ACCPFH+EKTPSF VN EKQ YHCFGCG GN Sbjct: 2 INEVLSRNDIVDVIGSYASLKKKGSNYEACCPFHHEKTPSFKVNREKQMYHCFGCGVGGN 61 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 F+M Y+ L F E VE LA +++P ++ S + + L ++ ++ Sbjct: 62 VFTFVMEYENLNFPEAVERLAERAGIQLPEKSMSAQERSREQYKIALKEMNKTAAAYFHY 121 Query: 130 SLQQ-PVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGM 187 L+ A +Y RGL+ E I RFA+G+A D++ + + L ++G+ Sbjct: 122 ILKHGQRGEKAYEYFRDTRGLTDETINRFALGYADIYRDDLYRYLKNKGYTDEQLKNSGL 181 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + ++ D+F R M PI D G+VI FGGRVLG+ PKY+N+ +T +F K L+ Sbjct: 182 VDITEKDGGVDKFWNRAMIPILDINGKVIAFGGRVLGDGKPKYINTSDTAVFDKSHTLFA 241 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 + A++ + + EGYMDV+++ Q G + AVASLGT+ T H ++ R + V Sbjct: 242 MNIARRSRRKG--FICCEGYMDVISMHQAGFDNAVASLGTAFTFGHANIIKRYADEVYLA 299 Query: 308 YDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMP 367 YD D AG A + + G R + + +DPD +R G EAFE R+++A Sbjct: 300 YDSDGAGVAATKKVIAILREV---GVGARVINMRPYKDPDEFIRNLGSEAFEDRIKKAES 356 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 FL + D S P R + IS + R + I D+ Sbjct: 357 GMMFLARIYSEEYDQSDPGERTKFQNQVAKEISYIEDPLERNNYIDAIARAYVINRDALA 416 Query: 428 ERL-------------------------------MPKAAESGVSRPVPQLKRTTMRILIG 456 E++ S + + T R+L+ Sbjct: 417 EKVHDYGVAGTPKPDVVEREERRLEEQTTNPDSGTGSGTASHGRQGRDVGENKTARLLLT 476 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 LV P L + + + ++ E L + Q + ++ ++ Sbjct: 477 WLVNEPSLFEKLDGVISEEDFDPGVFRTVAEKLFSQYREQHKVEPAIVVNTFQDVEEQRL 536 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 + + D D E+ + ++ + + ++ + S + ++ L Sbjct: 537 VASMLQTDLSIDMT--EEEISGAITDVVKKIKLASIKKHLE-------SENDITKVQQLI 587 Query: 576 QELAK 580 ++ K Sbjct: 588 KDRKK 592 >UniRef50_Q2BJF7 DNA primase n=1 Tax=Neptuniibacter caesariensis RepID=Q2BJF7_9GAMM Length = 656 Score = 506 bits (1304), Expect = e-142, Method: Composition-based stats. Identities = 226/448 (50%), Positives = 302/448 (67%), Gaps = 4/448 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVK-LKKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRIP+ FI+DLLAR +I+D++D RV+ LK+ GKN+ CPFH EKTPSFT N EKQFY Sbjct: 1 MAGRIPQHFIDDLLARINIIDVLDGRVQKLKRTGKNYSGLCPFHKEKTPSFTANQEKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGCGA GNA+ FLM+Y+ L F E VEELA +EVP + + + LY+L Sbjct: 61 YCFGCGAGGNALGFLMDYENLNFPEAVEELAKTAGMEVPRDDS-PQQREHDLRLSKLYEL 119 Query: 120 MDGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + +++Y+ L+ A YL+ RGLS + F+IGFAP GWDN+L G + E Sbjct: 120 LKAASSYYEDQLRSHQTRESAVNYLKSRGLSGQAAKAFSIGFAPSGWDNILNHLGKSEEE 179 Query: 179 RQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 Q L ++G+L+ N+ + YDRFR R+MFPIRD+RGRVIGFGGRVLG+D PKYLNSPET Sbjct: 180 IQLLEESGLLIHNEERDSRYDRFRNRIMFPIRDQRGRVIGFGGRVLGDDKPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 FHK R+LYGLYEA++ N + RL++VEGYMDVV LAQ+ I+YAVA+LGT+TT+ H++ L Sbjct: 240 TFHKSRELYGLYEARKHNQKLERLIIVEGYMDVVGLAQFDIHYAVATLGTATTSQHLERL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 F+ VI C+DGD AGR+AA RAL+T LP + DG++ RF+FLPDGEDPD+LVR+EGKE Sbjct: 300 FKIVPEVIFCFDGDNAGREAAMRALKTTLPVIEDGKEARFLFLPDGEDPDSLVRQEGKEN 359 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE R+ A PLS F F DL + DGRAR ST LP I+ + L+ + ++ Sbjct: 360 FENRISTAQPLSEFFFKCHSEGADLDSMDGRARFSTEVLPAINSMKTSLLQQMMLDKICE 419 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQ 445 + + + + + ++ Sbjct: 420 LTHLSLEQIQTAINFRESVQEPAQAQNN 447 >UniRef50_Q9S1N4 DNA primase n=27 Tax=Actinomycetales RepID=PRIM_STRCO Length = 641 Score = 506 bits (1303), Expect = e-141, Method: Composition-based stats. Identities = 173/574 (30%), Positives = 267/574 (46%), Gaps = 51/574 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + I ++ ++L+ G N CPFH+EK+PSF V+ K F+ Sbjct: 1 MAGRINDEDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPSKGFF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I F+M D L F E VE LA + + +E G +R +R L + Sbjct: 61 HCFGCQEGGDTITFVMKIDHLTFSEAVERLAGQAGITLRYEEGGYNPSHQRGERIRLVEA 120 Query: 120 MDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +Y + L P A + R +L RG F +G++P GWD++ + G + Sbjct: 121 HKIAAQWYAEQLATGPEADTGRAFLADRGFDQAAAEHFGVGYSPQGWDHLTRFLRGKGFS 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + L+ +G+ +G DRFR R+M+PIRD G V+GFG R L ++ PKYLN+P+T Sbjct: 181 DKELLLSGLSQEGRRGPI-DRFRGRLMWPIRDIGGDVVGFGARKLYEADNGPKYLNTPDT 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DHI++ Sbjct: 240 AIYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGGDHIKI 299 Query: 297 LFR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 L R + VI +DGD AG+ AA RA E + + PDG DP L Sbjct: 300 LRRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAA---ETYIAIAPDGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +G +A +E PL F ++ + DL TP GRA A P+++++ + + Sbjct: 357 AKGDDAVADLVEPRTPLFEFALRQIVARYDLDTPAGRAAALDEAAPVVARIKNSGAQHEV 416 Query: 412 RQELGNKLGILDDSQ----LERLMPKAAESGVSRPVPQLKR------------------- 448 +L LGILD + +L A + G P P ++ Sbjct: 417 AVQLAGMLGILDTQFVVKRIAQLARWARDRGGKGPAPDQRQRGGGPQQQAGPMTATPRGP 476 Query: 449 ---------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV------NTCL 493 T R L+ L +Q PEL + +DE P RE + + Sbjct: 477 ALNLRNPVFATERELLKLALQRPELVSPAFDAYGVDEFTAPPYAAVREAIMEAGGAEFGV 536 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 P ++ E A + +L++ + Sbjct: 537 QDPQDYLVRVREAAPDDTVRAMVTELAVEAIMLH 570 >UniRef50_Q8EPY5 DNA primase n=1 Tax=Oceanobacillus iheyensis RepID=Q8EPY5_OCEIH Length = 604 Score = 506 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 170/605 (28%), Positives = 264/605 (43%), Gaps = 30/605 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M +IP I + DIVD+I ++LKKQG+N+ CPFH EKTPSF+V+ EKQ +H Sbjct: 1 MTNQIPDEIIEQVKNANDIVDVIGEYIQLKKQGRNYFGLCPFHGEKTPSFSVSQEKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG GN FL D F E ++ LA +E+P + S + +Q L Sbjct: 61 CFGCGKGGNVFTFLKEIDSFTFYEALQFLAEKQGIELPQTSIKKESFLSEEDQQVL-TAN 119 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D L Y L+ QYL+ RG+S E + F IG+AP D L+ ++ Sbjct: 120 DWLMKLYHHLLKYTKDGKEGYQYLKDRGISDEALEDFQIGYAPNIKDFTLEFLTKKGFSK 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDI 238 Q L+ G+L + DRFR RV+FPIR+ G+ +GF GR L + PKYLNSPE + Sbjct: 180 QLLVKNGILSAQNDHDVIDRFRGRVIFPIRNAIGKTVGFVGRALHDGVEPKYLNSPEGGL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ A++ + N +++ EG +DV++ Q G+ VA+LGT+ T +LL Sbjct: 240 FQKSKILFNFDLAKKHIRKENEVILFEGSVDVISAYQNGLKNVVATLGTALTESQAKLLN 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R V+ CYDGD AG +AA++A + G ++R + +DPD+ +R G EAF Sbjct: 300 RYVETVVLCYDGDDAGLNAAYKASQLLRSV---GCEIRIAKMDPSDDPDSFIRSNGMEAF 356 Query: 359 E-ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + + F +L R L +S + R Y QEL Sbjct: 357 QNRIIRTSDTYMTFYMRYFRRDYNLKVEGDRIAYIEKVLKELSMIESTLEREYYVQELHK 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRT------------------TMRILIGLLV 459 + + +S + +L SR + R + LI ++ Sbjct: 417 EFNLSHESLMTQLQSYRNNQQNSRDNHRYNRYTNKGNSSYQTKLHPAFINAEKKLIAYML 476 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 Q+ + V N + L G +E + + + Sbjct: 477 QDSYITEKVQNDLGAAFNVNDHKIIATHLYAYYEEGNPPDIGLFMERLSEDHLKKHVVEA 536 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLEL---RQEELIARERTHGLSNEERLELWTLNQ 576 M DIA N ++ D + + + + + + R + E ++ Sbjct: 537 VMMTDIA--NSTDEEIDDYIRFILNESNQNVSIKSLKEKQRIAEQENNPMEAAKIAMEII 594 Query: 577 ELAKK 581 EL K+ Sbjct: 595 ELQKQ 599 >UniRef50_B1Y6J0 DNA primase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y6J0_LEPCP Length = 598 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 223/579 (38%), Positives = 301/579 (51%), Gaps = 52/579 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ FI DLLAR DIV ++ V+LKK G N+ CPFH EK+PSFTV+ KQFYHCFG Sbjct: 1 MIPQGFIQDLLARADIVAVVGRSVQLKKTGANYSGLCPFHAEKSPSFTVSATKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE----RHQRQTLYQL 119 CGA+GNAI FLM + FV+ V ELA VP E S + + R Q+ TL +L Sbjct: 61 CGANGNAIGFLMEASGMTFVDAVHELAQEVGATVPEENTSPEQREKAAQARAQQLTLTEL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 Y++ L+ + A YL++RGL+ E+ ARF +G+APPG + F + Sbjct: 121 QAQAAAHYRKQLK--ASPKAIDYLKRRGLTGEIAARFGLGYAPPGHHGLASAFAR--YDD 176 Query: 180 QSLIDAGMLV--TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 L+++G+++ R +DRFR+R+MFPIR+ +G +IGFGGRVL + PKYLNSPET Sbjct: 177 PLLVESGLVILDEGQDQRRHDRFRDRIMFPIRNVKGEIIGFGGRVLDDSKPKYLNSPETP 236 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KG +LYGLYEA+Q + +LV EGYMDVVALAQ G + AVA+LGT+ TADH+Q L Sbjct: 237 VFVKGHELYGLYEARQAIRQRGHVLVTEGYMDVVALAQLGFDQAVATLGTACTADHVQKL 296 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+ V+ +DGD AGR AA RA+E LP+ TD R RF+FLP DPD+ VR EG EA Sbjct: 297 VRHTDQVVFSFDGDNAGRRAAMRAMEAVLPFATDTRSFRFLFLPAEHDPDSYVRAEGAEA 356 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 FE R+ +A+PLS+ + DL TP+GRARL A PL +P LR+ + E Sbjct: 357 FERRIAEALPLSSQMLQVAGADCDLVTPEGRARLVAQAEPLWRALPAGVLRMQMVNEFAQ 416 Query: 418 KLGILDDSQLERLM---PKAAESGVSRPVPQLKRT------------------------- 449 + R P+A +P + Sbjct: 417 VAQLNAADLAARWGAGPPRAPAQSQEQPYAPSYPSTPGRGKFQRRDGRPGKDSDLMAQLA 476 Query: 450 ------------TMRILIGLLVQNPELATLVP--PLENLDENKLPGLGLFRELVNTCLSQ 495 LL+Q E + + L E LFR L + Sbjct: 477 SRAGGRRPNAHRPEDRAAWLLLQRSEWWAGLSGADHDLLCELPGWHGELFRHLDQMHMES 536 Query: 496 PGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 L+ +L + +T L + + E Sbjct: 537 EPLSWPELRDTLVQFEWCSTAIALVDAAIQGIEPLLEDL 575 >UniRef50_C7H3D7 DNA primase n=2 Tax=Faecalibacterium prausnitzii RepID=C7H3D7_9FIRM Length = 591 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 150/566 (26%), Positives = 253/566 (44%), Gaps = 38/566 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP +I +L RTDIVD++ V+LK++G+ + CPFH+EKTPSF V + Q ++CFG Sbjct: 1 MIPHEYIEELTRRTDIVDVVGNYVQLKRKGRLYGGLCPFHSEKTPSFYVYPDTQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+ I F+ + +++ E V+ LAA + P E R + + Sbjct: 61 CGVGGDVIHFVRRINSIDYTEAVKMLAARAGMPEPQEDDKTG-----RLRSRILSMNKEA 115 Query: 124 NTFYQQSLQQ--PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L A AR Y +RGL + I RF +G+AP + + N+Q Sbjct: 116 ARYFHACLNSTVEEARQARAYWRRRGLDDKTIVRFGLGYAPDDGQGLYQYLRDKGYNQQE 175 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 L +G+ + GR Y F +RVM PI D RG +I FGGRVL + PKY+NSPET ++HK Sbjct: 176 LDASGLFKRSQSGRIYCLFWKRVMTPIFDLRGNIIAFGGRVLDDSKPKYVNSPETLVYHK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 ++ L A++ + R ++ EGYMDV+++ Q GI+ AV + GT+ T D ++L+ + Sbjct: 236 SDTVFALQIAKKSASR--RFVLCEGYMDVISMHQAGIDTAVCACGTALTPDQVKLISQYA 293 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 VI YD D AG+ A R+LE + ++ + +P +DPD ++K G E F+A Sbjct: 294 EEVILSYDSDEAGQKATLRSLEL---FRNSPVKVGVLQIPGAKDPDEYIKKYGSERFKAL 350 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 ++ F L + DL R A+ ++++ T + L + I Sbjct: 351 LDGVGNALDFRLGRLKNKYDLKQDAQRLEYVKEAVNMLAERSNPTEQEVYAGRLAEETNI 410 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLK-------------------------RTTMRILIG 456 ++ + +L S R Q + + + L+ Sbjct: 411 SKNAIMTQLADAVKRSNSKRRWAQNQARLQSGEMHQISVPYSAGGSQALGVASAEQRLLA 470 Query: 457 LLVQNPELATLVPPLENLDENKLPGL-GLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 +++ P V + ++ LP L+ + ++ L Sbjct: 471 AMLREPSYIPQVRAQLSPEKFVLPQQKELYEAFLQCQEQGIEISLSTLRPFVSEEALNEL 530 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNH 541 + + D+ + + D + Sbjct: 531 SRLAAQYSDVNCTPDDIRLYLDRIAR 556 >UniRef50_D0KXZ5 DNA primase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXZ5_HALNC Length = 559 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 212/565 (37%), Positives = 322/565 (56%), Gaps = 17/565 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI+D+LARTD+V+LI A+V LKK+GK + ACCPFH EKTPSF VN +KQFYHCFGC Sbjct: 7 IPESFIDDVLARTDLVELIHAQVPLKKKGKEYAACCPFHQEKTPSFYVNPDKQFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHGNA+ FLM+Y+ +F +EELA + +P + E+ + M N Sbjct: 67 GAHGNAVSFLMDYEHRDFRGAIEELATRAGMTLPVSEVDHKALEEQ---AAMLDSMSFAN 123 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +++ L+ A YL++RG++ A F +GFAP G + +L P+ R L++ Sbjct: 124 AHFKRQLR--AHQEAIDYLKQRGVNGTTAALFDLGFAPNG-NLLLGHCESPPKMRDELLE 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++V D G YDRFR R+MFPIRDKRG++IGFGGR+LG PKYLNSPE+ +FHKG+ Sbjct: 181 LGLIVQKDDGEQYDRFRRRIMFPIRDKRGQIIGFGGRILGPGEPKYLNSPESRLFHKGQN 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLYEA+ D+A P R+++VEGYMDVV LAQ+G+ VA++GT+TT + Q L+R + ++ Sbjct: 241 LYGLYEARLDDARPARVIIVEGYMDVVMLAQHGVRNVVATMGTATTDEQTQSLYRFSPSL 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME- 363 + C+DGD AGR AA +AL ALP++TDGR LRF+FLPDGEDPD+ ++ +GK AF ++E Sbjct: 301 VFCFDGDAAGRRAATKALHAALPHLTDGRDLRFLFLPDGEDPDSFIQAKGKSAFIEQIEH 360 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 ++ F+ L A+ S L I +P L+ ++ + G+ Sbjct: 361 HSLSFDNFILQLLDQMEPGQDTAAMAKKSKLGNDWIRTLPDGALKRITQRRINEHTGVWR 420 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLG 483 + + P ++P K+T +++ +++++P+L V + +++P Sbjct: 421 AAYKKNTGPTEPTLPRNKPQSYAKQT---LILSIVLKHPDLLQRVLEPQAWFNSRVPEG- 476 Query: 484 LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMF 543 +QP Q G T + + A+ D+L + Sbjct: 477 -----FQLLATQPRARWAQSASELWGAEETKTALAIEFQGIERAET-AQNILEDTLIQLH 530 Query: 544 DSLLELRQEELIARERTHGLSNEER 568 S + ++ + ++ +E+ Sbjct: 531 RSESDSASKQASRQALARFMAEQEK 555 >UniRef50_Q04A24 DNA primase n=28 Tax=Lactobacillus RepID=Q04A24_LACDB Length = 612 Score = 503 bits (1295), Expect = e-141, Method: Composition-based stats. Identities = 160/605 (26%), Positives = 272/605 (44%), Gaps = 36/605 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAGRI FIN++ +IVD+I V L+K+GK++ CPFH EKTPSF+VN +KQF++ Sbjct: 1 MAGRISEDFINEVRGSVNIVDVISQYVSLEKRGKDYVGLCPFHQEKTPSFSVNPDKQFFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN F+M +++ F E+VE +A N+ +P E Q + + L Q+ Sbjct: 61 CFGCHKGGNVYKFIMEKEEVTFPESVERVAEFANIPMPQEY-----QEQPVKLNPLMQMH 115 Query: 121 DGLNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FYQQ L + +Y KRGL +++ F IG+AP D +L G Sbjct: 116 KEAADFYQQVLMTTKIGERGLEYARKRGLDDDLLKHFKIGYAPGKSDLLLTYLRGEGYTD 175 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 L ++G+ V + GR +DRFR+R+MFP+ D+ G ++ F GR + +D PKYLNSPET Sbjct: 176 NQLAESGLFVKSQDGRLFDRFRDRLMFPMSDESGHLVAFSGRRISDDPEEPKYLNSPETS 235 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K L+ EA++ + L++ EG+MDV++ + G+ +AS+GTS T + ++ Sbjct: 236 IFNKSDLLFHFSEAKKHARKEGHLVLFEGHMDVISAYKAGVKTGIASMGTSLTQQQVYMI 295 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T V+ YDGD G+ A RA+ L + LPD DPD V++ G ++ Sbjct: 296 RRITKQVVINYDGDDPGQHATERAVGLFKQAGN--FDLGIVILPDKLDPDEYVKQYGPDS 353 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 ++A + A+ + F L + +++ + + A+ I+ +P + L Sbjct: 354 YQAAIRGAISTTDFFLQRLKKKYNINNEREQVAYLSEAVAEIAALPNPVEQELYVGRLAK 413 Query: 418 KLGILDDSQLERLMPKAAESGV---------------------SRPVPQLKRTTMRILIG 456 + G+ D+ L + +PV + + R+L Sbjct: 414 ETGVSLDALKVNLSRARRKQRRVDQHTSSEVLPELAPLAPAADPQPVTRALKAQQRLLYA 473 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 + + L+ L + +N + ++ L+ + + Sbjct: 474 YIYSDEARDYLIVN--GFVFPNPEYERLAKLWLNYIETHENVSLSGFLDFIPEELQSIIV 531 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 S I + + + ++ + + N++ L Sbjct: 532 ---STDMTGLPGEITLEELEAQVRVLNLCKIDDEIDRHMQAIADARRRNDQTAILLETQA 588 Query: 577 ELAKK 581 L + Sbjct: 589 ILQLR 593 >UniRef50_B0RBC7 DNA primase n=5 Tax=Actinobacteria (class) RepID=B0RBC7_CLAMS Length = 630 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 172/630 (27%), Positives = 270/630 (42%), Gaps = 64/630 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MA I + I+++ +R ++ D++ V LK G + CPFH+E+TPSF V + FY Sbjct: 1 MA-LIRKNDIDEVRSRVNLGDVVGEYVTLKSAGVGSLKGLCPFHDERTPSFHVRPQVGFY 59 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ FL + D + F E VE +A ++ +E G + ++ R L Sbjct: 60 HCFGCGEGGDVYTFLQHMDHVTFAEAVERMAQRIGYQLHYEDG--QAATDQGNRSRLLGA 117 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ + L A R +L +RG RF +GFAP WD + Sbjct: 118 NEAAAEFFVEQLGSEEAEIGRTFLGERGFDQGAAQRFGVGFAPQSWDALSSHLKAKGYAE 177 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 L+ AG+L D+G +YDRFR R+++PIRD G +GFG R L + PKYLN+PET Sbjct: 178 AELVTAGLLSQGDRG-AYDRFRGRLVWPIRDLTGATVGFGARRLREDDKGPKYLNTPETP 236 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK LYGL A++D + +++VVEGY DV+A GI AVA+ GTS DHI++L Sbjct: 237 VYHKSSVLYGLDLAKRDVSRGRQVVVVEGYTDVMACHLAGITTAVATCGTSFGVDHIKVL 296 Query: 298 FR------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R V+ +D D AG+ AA RA + Q P+G DP L Sbjct: 297 RRVLGDDSGLGEVVFTFDPDAAGQKAAMRAFSEERRFAA---QTYVAVGPEGLDPCDLRL 353 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G +A ++ P+ F ++ DL T +GR A P+++ + +LR Sbjct: 354 TRGDDAVRRMIQGKKPMFEFAIKQILADHDLETVEGRVAALRAAAPVVADIRDPSLRPGY 413 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRT---------------------- 449 +EL LG+ L + +G S P R+ Sbjct: 414 ARELAGWLGMD----LTEVGRAVQTAGRSMPADGADRSGGAPQGRHAQGGHGPDDDGAGD 469 Query: 450 -----------------TMRILIGLLVQNPELA--TLVPPLENLDENKLPGLGLFRELVN 490 R + ++Q+PEL LV + + ++ Sbjct: 470 ASRSMSLMDLPTDLATRLERDALMAMLQHPELVGNDLVMRAAQVTFVNESLAVVRDGVIG 529 Query: 491 TCLSQPGLTTGQLLEHYRGTNNAATLEKL--SMWDDIADKNIAEQTFTDSLNHMFDSLLE 548 + + G + + A +++L + + D + + L Sbjct: 530 SMDALGGADWLSRVALEVPESFATLVKQLGVAPLPNRGDADKLAVYVKGVTAELVGRDLL 589 Query: 549 LRQEELIARERTHGLSNEERLELWTLNQEL 578 R+ +LI R + ER + +EL Sbjct: 590 RRKADLIGRL-QRTDATHERERYQEIQREL 618 >UniRef50_D0J2H6 DNA primase n=3 Tax=Comamonadaceae RepID=D0J2H6_COMTE Length = 688 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 201/440 (45%), Positives = 277/440 (62%), Gaps = 9/440 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP+ FI +LL+R D+VD++ V+LKK G NF CPFH+EK+PSFTV+ KQF+HCFGC Sbjct: 30 IPQSFIQELLSRVDVVDIVGRYVQLKKGGANFMGLCPFHSEKSPSFTVSPSKQFFHCFGC 89 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR----QTLYQLM 120 G +GNAI FLM + + FVE V+ELA L+VP + S + + Q+ +TL L+ Sbjct: 90 GKNGNAIGFLMEHAGMGFVEAVQELANQCGLQVPQDDISPAERQRQAQQKQKAETLSDLL 149 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + Y++ L+ A A +YL+KRG+S EV RF +G+AP GW + F + Sbjct: 150 EKAGESYRKQLK--AAPKAIEYLKKRGVSGEVSKRFGLGYAPAGWHGLASVFAE--YDNP 205 Query: 181 SLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L + G+++ + R YDRFR+R+MFPIR+ +G IGFGGRV G++ PKYLNSPET +F Sbjct: 206 QLEECGLVIVGEDDSRRYDRFRDRLMFPIRNVKGEYIGFGGRVFGDEKPKYLNSPETPVF 265 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKGR+LYGLYEA+Q + LV EGYMDVVALAQ G A+A+LGT+ T +H+Q LFR Sbjct: 266 HKGRELYGLYEARQALRDMGYALVTEGYMDVVALAQLGFANALATLGTACTPEHVQKLFR 325 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T+ V+ +DGD AGR AA +AL+ ALP TD R ++F+FLP DPD+ +R+ G EAF Sbjct: 326 FTDAVVFSFDGDGAGRRAARKALDAALPLATDTRSIKFLFLPSEHDPDSFIREFGPEAFS 385 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + A PLS FL S DL +GRA +++ A PL S +P L+ L E+ Sbjct: 386 RYVGDATPLSRFLIESASEGCDLGQTEGRAHMASNARPLWSLLPDGALKRQLLSEIAALA 445 Query: 420 GILDDSQLERLMPKAAESGV 439 + + +AA + Sbjct: 446 QLDSRDLSDIWAQEAARTAP 465 >UniRef50_C4V566 DNA primase n=3 Tax=Selenomonas RepID=C4V566_9FIRM Length = 594 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 170/594 (28%), Positives = 264/594 (44%), Gaps = 31/594 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F+ + ARTDI+ ++ V LK++G + CCPFH+EKT SF+V + F++CFGC A Sbjct: 7 EAFVQQVRARTDILAVVQGYVSLKRKGSRYWGCCPFHSEKTASFSVVPAEGFFYCFGCHA 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+A FL + + E + A +E P + L ++ F Sbjct: 67 GGDAFKFLSLIEHITPFEAILRQAEQLGIERPARQRDAREEARLRALDDLRRVNALARDF 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L + + YL RG++ E I R+ IGFAP W + F + L+DA Sbjct: 127 FHNCLTMTRYGAAGKAYLAGRGITDEAIERYGIGFAPDAWSKLSDAFQKRGVAQHVLVDA 186 Query: 186 GMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+ V ++G YDRFR RV+ PI D+RGR++GFGGR LG+ PKYLN+ ET +F+K + Sbjct: 187 GLAVRRERGGGIYDRFRGRVIIPIADERGRIVGFGGRALGDAQPKYLNTAETPVFNKRKL 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+G+ A A +VVEGYMD +A + G+ VA+LGTS T+DH LL R + Sbjct: 247 LFGMDRAHSAIARAGYTIVVEGYMDAIAAWEAGVENVVATLGTSFTSDHAALLLRRAPRI 306 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + CYD DRAG++A RA ++R + LPDG+DPD VR G EAF A +E Sbjct: 307 VFCYDSDRAGQEATLRA---LAAVRGRAAEVRVLLLPDGKDPDEYVRTHGAEAFRALVET 363 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+P AF + Q+ +G+ LP+++++ + R + + + + Sbjct: 364 AVPAPAFRLRHIRAQM-ADGIEGQRAALRAMLPVLAEL-DDVERAAYVRRTAAEFFLDEG 421 Query: 425 SQLERLMPKAAESGVS-------------RPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 + L G + R + + R LI + +P+ + Sbjct: 422 VVADALRRFLRRGGTAESGTAEPTRIAAVRQPDRALQRAGRQLIAAVWHDPDFLASITDA 481 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 L+ G ++ + G + A L D Sbjct: 482 VPLEAFPDDFFGTILRAIDAHIHDGGALNADFIAAQPPEMGAEVTRALVEDAPSKD---- 537 Query: 532 EQTFTDSLNHMFDSLLELRQEELIAR---ERTHGLSN--EERLELWTLNQELAK 580 T D+L L + R G + +E + + ELA+ Sbjct: 538 --TCMDALAAFRRVYLTAALAQHTRRAEMMMQEGKAGYVDELNAVKRIQDELAR 589 >UniRef50_C4L400 DNA primase n=2 Tax=Exiguobacterium RepID=C4L400_EXISA Length = 603 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 160/601 (26%), Positives = 269/601 (44%), Gaps = 27/601 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I ++ TDIV+LI RV+LKKQG CPFH+E +PSF+V+ EK YHCFG Sbjct: 3 RIPDEVIAEVKQATDIVELIGERVELKKQGHRLVGLCPFHSENSPSFSVSPEKGMYHCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN F+M + L F ETVE LA N+ V G E+ R+ + + Sbjct: 63 CGAGGNVFTFVMETEGLSFPETVERLATRANISVDGIQGDEELTREQVWRKQMRDAHRLV 122 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 Y + L + YL R L+ E IA++ IGFAP ++ + + + Sbjct: 123 ADLYHEVLMKTEAGEVGLTYLRNRDLAEETIAQYKIGFAPDQRRFTVELLERRGFDLEVM 182 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 ++AG++ + G +DRF RV+FPI D+ G ++GF GR + + PKY+N+ ET +F+K Sbjct: 183 VEAGLISKSKSGEYFDRFEGRVVFPIADRDGTIVGFSGRAIDDRQPKYVNTAETPLFNKS 242 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 L+G +A+ + R+ +VEG +DV+ +AQ G VASLGT+ + H + L R Sbjct: 243 ELLFGFSQARATMRKKKRVFLVEGNVDVLQVAQAGTQEVVASLGTAFSPQHARALSRIVE 302 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 VI CYDGD AG++A + + ++ + LP+ DPD +R+ G ++ + Sbjct: 303 EVIICYDGDHAGQEATQKVIRLLEASP---LDVQVLPLPEKTDPDDYIRQHGATHWQQFI 359 Query: 363 E-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 E + + + F+ +L+ R R L I + R ++L ++ I Sbjct: 360 ESEQLSVLDFMNRMYRRGKNLNREGERIRFIESMLEEIGKTNDSIRRDLYVKKLSDEFEI 419 Query: 422 LDDSQLERLMPKAA----ESGVSRPVPQLKR-----------TTMRILIGLLVQNPELAT 466 ++ R+ + + PV +++ + L+ ++ PE Sbjct: 420 PLETLRSRIPRPTSSESTPTRAMEPVEPVRKRSSKAGEPRWMKAEKYLLRAMLTGPEQVR 479 Query: 467 LVPPLENLDENKLPGLGL---FRELVNTCLSQPGLTTGQL--LEHYRGTNNAATLEKLSM 521 V L L E+V+ ++Q L +E Y + + Sbjct: 480 FVRDRLGLRYQDETHRMLGSALYEIVSETMTQDEFDQITLPFMERYCDQRPDYAMRFAEI 539 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN-EERLELWTLNQELAK 580 ++E + + + + + E S ++ +L L ++ Sbjct: 540 RLMAGPDELSEDVLDEYIRVINSYEEQRQIERAKREIAQDAESIVDQASKLQELI-ARSR 598 Query: 581 K 581 + Sbjct: 599 R 599 >UniRef50_C7I405 DNA primase n=1 Tax=Thiomonas intermedia K12 RepID=C7I405_THIIN Length = 624 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 237/625 (37%), Positives = 324/625 (51%), Gaps = 53/625 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP FI DLLAR DIV+++ V+LKK G N+ CPFH EKTPSFTV+ KQFYH Sbjct: 1 MQQRIPPGFIQDLLARADIVEVVGQYVELKKTGTNYKGLCPFHGEKTPSFTVSASKQFYH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQR----QTL 116 CFGCGAHG AI FLM + + FV+ V+ELA + + VP + Q+ TL Sbjct: 61 CFGCGAHGTAIGFLMEHAGMGFVDAVKELAGRYGMTVPEPDLDPQQLRQLQQQRSLQATL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 + + FYQ L+ + A+ YL RGL +V +F +G+AP W + F Sbjct: 121 VDALQTADGFYQHRLRH--SERAKNYLIARGLQGQVAKKFGLGYAPDDWQPLAGAFAN-- 176 Query: 177 ENRQSLIDAGMLVTNDQ---------------GRSYDRFRERVMFPIRDKRGRVIGFGGR 221 N +L+ +G++V D R YDR R+R+ FPIR+ RG VIGFGGR Sbjct: 177 YNADALVQSGLVVARDAAGDTLDPQAESFASAQRRYDRLRDRITFPIRNLRGEVIGFGGR 236 Query: 222 VLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYA 281 ++ PKYLNSPET +FHKG +LYGL+EA+ + LVVEGYMDVVALAQ+G+ A Sbjct: 237 IIDQGEPKYLNSPETAVFHKGEELYGLFEARSAISRAGYALVVEGYMDVVALAQFGVEQA 296 Query: 282 VASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLP 341 VA+LGT+ TA +Q LFR T V+ +DGD AGR AA RA+E ALP ++D R ++F+FLP Sbjct: 297 VATLGTACTAQQLQKLFRHTGQVVFSFDGDTAGRRAARRAMEQALPLLSDTRVVKFLFLP 356 Query: 342 DGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 DPD+ VR++G EAFE + +A PLS FLF+SL V ++T +GRA+ A PL+SQ Sbjct: 357 AEHDPDSYVREKGAEAFEREIGRAQPLSEFLFSSLFDGVAMTTAEGRAQAIHEAGPLLSQ 416 Query: 402 VPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM---------R 452 + L L +L +L + E L + S P M R Sbjct: 417 ITAPALLGQLVADLARRLEMPATELREVLRLSSPSRKPSAPAESFGTRGMKTAPRVRGGR 476 Query: 453 ILIGLLVQNPELATLVP-----------------PLENLDENKLPGLGLFRELVNTCLSQ 495 + P+ L P GL L + Q Sbjct: 477 EALRAFAAVPKDPLRQLLPLLLSQPELWWSINPAQHALLSLEPGPLQGLVLTLESILEDQ 536 Query: 496 PGLTTGQLLEHYRGTNNAATLEKLSMWDDI-ADKNIAEQTFTDSLNHMFDSLLELRQEEL 554 P L+ L E R +A D + D+ A+Q L+ + + L+ RQ+EL Sbjct: 537 PELSAAALWEALRAAGHAPEEMLAESPDPLELDEAAAKQDLLAILSRLERAALKRRQDEL 596 Query: 555 IARERTHGLSNEERLELWTLNQELA 579 +A +++ +R E +L L Sbjct: 597 VA---GGLVADADRTEYRSLALRLK 618 >UniRef50_Q1PW47 Similar to DNA primase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PW47_9BACT Length = 599 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 157/592 (26%), Positives = 269/592 (45%), Gaps = 15/592 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M IP+ I ++ DIV +I ++LK+ GK F CPFH+EKTPSF VN +K+ + Sbjct: 1 MVHFIPQEKIAEIQFAADIVQIISEYIQLKQSGKAFIGLCPFHSEKTPSFFVNPDKKLFK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G F+M + ++FVE V+ +A+ +++ + + + + ++ LY+ Sbjct: 61 CFGCGEGGTVFQFVMKQEGMDFVEAVKLVASKSRVDL-TQIYAKETSLSSSKKTHLYETT 119 Query: 121 DGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 TFYQ+ L AR YL KR ++ I F IG+AP WD+++K G + Sbjct: 120 RFAATFYQKMLLDAMKGKKARDYLLKRKINDHSIKNFCIGYAPAEWDSLVKMCKGGNVSM 179 Query: 180 QSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L AG+++ ++ YDRFR+R++FPI D R +V+GFGGR L + PKYLNSPET + Sbjct: 180 YQLQQAGLIIQKKERDSYYDRFRDRLIFPILDIRKQVVGFGGRALDDSLPKYLNSPETVL 239 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K LYG+ A+ + +++++EGY DV+ Q+GI +AVA LGT+ + H++ L Sbjct: 240 FNKSNILYGIDIAKSAILKKQKVILMEGYTDVIMAHQHGIEWAVAVLGTAISKQHLRSLR 299 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI D D AG+ ++ R L+ + + ++ LP G DP + EG E F Sbjct: 300 QYCSRVILLLDADSAGQKSSDRNLDIFIE---EEFDVKIAQLPKGYDPCDFLLAEGPEKF 356 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++ A F + D+ST G+A L + P R L + + + Sbjct: 357 LSYIDSAKDFFHFKIEFAATKWDMSTVHGKANALNNVLATAMKTPDAIKRNLLIKLISEE 416 Query: 419 LGILDDSQLERLM--------PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATL-VP 469 + I + + + P + ++ R ++ L++ L + Sbjct: 417 MSIDEAALWSHIKNVKRPLSVPANNNNQKTKQRLDASSMAEREILYLMLSCNSLIPRIIN 476 Query: 470 PLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 + + L + +V + +L L + + D Sbjct: 477 EKIPEEFDNKDFLEIAGRIVEIYQKNKAVKEEDVLHSIGEARLNKLLVDIVTTREFQDMT 536 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + S+ + ++ L +E KK Sbjct: 537 DYRDRLEACILFFKRRNRRKDIHITKKKMLETARSSHKEEDIVMLLEEYHKK 588 >UniRef50_D1VTG4 DNA primase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VTG4_9FIRM Length = 600 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 172/586 (29%), Positives = 285/586 (48%), Gaps = 22/586 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ I + ++ + DI +LI V LK+ G N+ CPFHNEKTPSF+++ K + Sbjct: 1 MSFIIDDNLLEEIRDKVDIYELISQYVNLKRSGANYIGLCPFHNEKTPSFSLSPSKGIFK 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F+M + L F E ++ LA +N+E+ S + + + Q Y++ Sbjct: 61 CFGCGEGGDVISFVMKREGLGFREAIKFLADKYNIELRQAHYSKKDKELKDKAQRFYEIN 120 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ +L+ + YL KR +S VI ++ +GFA WDN+ + Sbjct: 121 RQAALFFYNNLKN--SKLGMNYLRKREISPAVINKYGLGFANDSWDNLKNHLLSLGYKEE 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L++ +L + +G++YDRFR R+MFPI D +GRVI FGGRVLG++ PKYLNS E IFH Sbjct: 179 ELVEINLLS-SSKGKTYDRFRNRIMFPIIDTKGRVIAFGGRVLGDEKPKYLNSSENLIFH 237 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG L+ L ++ + +++++VEGYMDV++L GINY+VASLGTS T L+ R Sbjct: 238 KGSNLFNLNLISKEASR-DKIILVEGYMDVISLYNSGINYSVASLGTSLTQAQAGLIKRY 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 ++ CYDGD AG +A RA++ L ++G + + L +G DPD ++K GK +FE Sbjct: 297 AKDIYICYDGDSAGINATVRAIDIML---SEGISPKIISLAEGLDPDEYIKKYGKISFEG 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ F ++L + +LS+ DG ++ + A ++S + R + G Sbjct: 354 QVANGKSFLDFKIDNLKEKFNLSSSDGLSKFTMEAGKILSSIKNPIERDVYMRNFCKTYG 413 Query: 421 ILDDSQLERLMPKAAESGVSRPV------------PQLKRTTMRILIGLLVQNPELATLV 468 I S + + + LI + + + Sbjct: 414 ISTISLNSYISLINKNRPKKKFDKPKKIIKPKGKLQSGNIKAQKGLIAYCLAGHDFYDYI 473 Query: 469 PPLENL-DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 L + + +F EL N + +G ++ T +++ I D Sbjct: 474 KSKVELTLFSSVEIRIIFEELENYYDKKIKKDDFFKDLINKGLVSSETYKEI--ISLIVD 531 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 + + +D L + S L +E L+ + + SN + E++ Sbjct: 532 EPEGNKIISDYLLTLKRSWLLQEKENLLNQLDSIAKSNSKDKEIFE 577 >UniRef50_D1U3K3 DNA primase n=2 Tax=Desulfovibrio RepID=D1U3K3_9DELT Length = 590 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 160/596 (26%), Positives = 263/596 (44%), Gaps = 39/596 (6%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R + + AR I D++ V LK + CPFH E PS +VN ++ F++CFGC Sbjct: 1 MDRSAVEAVKARISIADIVRRYVDLKPVSGRWMGACPFHQETKPSMSVNDDEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ DF + LEF E +E LAA +E+ + + + L+ + D N Sbjct: 61 QASGDVFDFYARINGLEFREALEHLAAEAGVELGNVPHDPHAAERKARIAMLFDMHDEAN 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++Q++L AR+YL KRG++ +VI +F +G++P W + G + ++ Sbjct: 121 AWFQRNLTMEAGAVAREYLTKRGMTPDVIRKFGLGYSPDDWRGLESHLKGKGRTPELGVE 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N++G YDRFR R++FPI++ GRVI FGGR++ + PKYLNS +T I+ KG Sbjct: 181 AGLLSQNEKGNIYDRFRGRLIFPIQNLSGRVIAFGGRIITDGEPKYLNSSDTPIYKKGDH 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ R L+ EGYMDV++L Q+G A LGT+ T + ++ L + V Sbjct: 241 LYGLNLARSTMTRSKRALLTEGYMDVISLHQFGYTDACGVLGTALTPEQVKRLAGFCSRV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 +DGD AGR AA ++ L G R + +P GED D+L++ +G E FEA MEQ Sbjct: 301 DLVFDGDGAGRKAALKSSRMIL---LQGVACRVVLMPQGEDVDSLLQTKGAEGFEACMEQ 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F +L + + A ++ +P +LR + + LG+ + Sbjct: 358 APDGLDFCMTTLRNEFAPR------EIMAWAKGFLTDLPDASLRAFYLPRIAGGLGLSEA 411 Query: 425 SQLER--LMPKAAESGVSRPVPQLKRTTM------------------RILIGLLVQNPEL 464 + + RP + + + +Q P+ Sbjct: 412 DFRRDTGVSGPPRNTPGRRPPERGSHQAQDGQGRQNLPAVGKEDHDDKYFLRFAIQYPDY 471 Query: 465 ATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE-KLSMW 522 + L+ +LVN GQ+L + + + + Sbjct: 472 VQALAERGFAHVLATQWAGALWEKLVNAQH-------GQILSQLNDQEKSFYFKCRAEVR 524 Query: 523 DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + N + + + + +L LS +R + + L Sbjct: 525 QTALTGRELLDEWEHICNKIAFAQQKEDRRQLKEALNQAQLSG-DRQRINECFRAL 579 >UniRef50_C0EE26 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EE26_9CLOT Length = 617 Score = 499 bits (1284), Expect = e-139, Method: Composition-based stats. Identities = 164/591 (27%), Positives = 281/591 (47%), Gaps = 36/591 (6%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G I FI L DI +I + V +K++G+N A CPFH EKTPSF + + Q ++CF Sbjct: 32 GMISESFITQLKLACDIESIISSYVPMKREGRNKKALCPFHLEKTPSFVIYEDTQSFYCF 91 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ I F+M + L+++E V LAA + VP + G + + + ++ Sbjct: 92 GCGAGGDVITFIMRIENLDYIEAVRFLAARVGMTVPED---GQDDRKARLKARILEMNRE 148 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ +L+ P + +Y R L+ + + + +G+AP W ++L+ + + Sbjct: 149 AARFFHANLKSPAGQAGLRYFAGRRLTKQTVVTYGLGYAPDDWHSLLRHLSSKGYSYEEQ 208 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 A ++V + +G YD+FR RVMFPI D RG VIGFGGRVL + PKYLNS +T +F K Sbjct: 209 EAAALVVKSQKGNYYDQFRNRVMFPIIDLRGNVIGFGGRVLDDSKPKYLNSADTPVFKKS 268 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ L A+Q + L++ EGYMDV+A+ Q G++ VA+LGT+ T++ +L+ + + Sbjct: 269 RNLFSLNFAKQA--KERTLVLAEGYMDVIAMYQAGVHNVVATLGTALTSEQARLISQYAD 326 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +VI YD D G+ A +A + G + R + L D +DPD ++K G F+ + Sbjct: 327 DVIIAYDSDEPGQIATAKASRL---FEEAGVEARVLVLKDAKDPDEYIKKFGAGRFQVLL 383 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 EQ+ +++ F L + DL PD + + A +I+ + R L + G+ Sbjct: 384 EQSENVTSSKFKRLKEKYDLELPDEKIKYLGEACGVIAGLYDSLERDVYASTLAAECGLT 443 Query: 423 DDSQLERLMPKAA--------------ESGVSRPVPQLKR---------TTMRILIGLLV 459 + L+++ +SG + P +L +IG L Sbjct: 444 KEVVLDKVAAIRKSRFGRQKKREWRDIQSGRAAPPDRLNPESAKYPKEAAAEEGIIGFLC 503 Query: 460 QNPELATL-VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 +NP+ + ++ D LF +V+ + + E Sbjct: 504 KNPDYLEYLLGKIQPGDFPTSWNKRLFELIVDKIQNNLPIELSFFNEQLSPDEMGRFSGI 563 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL----IARERTHGLSN 565 L+ + ++++ + + D L + L + + +L + R L N Sbjct: 564 LARFRELSNTKQSLDDYIDVLLKHKNRLKDEDRFDLPVDAYEKRRQELLKN 614 >UniRef50_A9KI24 DNA primase n=17 Tax=Bacteria RepID=A9KI24_CLOPH Length = 596 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 167/583 (28%), Positives = 267/583 (45%), Gaps = 27/583 (4%) Query: 18 DIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNY 77 DIVD+I + VKL+K+G N CPFHNEK+PSF+V+G KQ YHCFGCG GN FLM Y Sbjct: 16 DIVDVIGSYVKLQKRGANHMGLCPFHNEKSPSFSVSGSKQMYHCFGCGVGGNVFTFLMEY 75 Query: 78 DKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVAT 137 + FVE ++ L +++P S ++ + + +L +Y L+ Sbjct: 76 ENYTFVEALKVLGDRAGVKLPELEYSEEAKKAADLKTRVLELYKEAGKYYYYQLRSKQGE 135 Query: 138 SARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSY 197 A YL RGLS E+I +F +G++ D++ + L +G+ + +Y Sbjct: 136 EALAYLRNRGLSEEIITKFGLGYSTKYSDDLYQYMKKAGYEDSLLRQSGLFTMEESKGAY 195 Query: 198 DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAE 257 D+F RVMFPI D +VI FGGRV+G+ PKYLNSPET +F K R L+GL A+ Sbjct: 196 DKFWNRVMFPIMDGNNKVIAFGGRVMGDGVPKYLNSPETIVFDKSRNLFGLNFARTS--R 253 Query: 258 PNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDA 317 + L+ EGYMDV+AL Q G AVASLGT+ T +LL R T YD D AG A Sbjct: 254 KDYFLICEGYMDVIALHQAGFQNAVASLGTAFTPQQARLLSRYTKEAYLTYDSDGAGVAA 313 Query: 318 AWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLM 377 A RA+ G + + + +DPD ++ G E ++ R++QAM F + L Sbjct: 314 AIRAIPIL---KEAGLSAKVIDMKPYKDPDEFIKALGAEEYQNRIDQAMNSFFFEISVLE 370 Query: 378 PQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMP----- 432 DL P+ + + + E R + L K + D+ + + Sbjct: 371 RDYDLGDPEQKTKFFNEMAKKLLIFTEEIERNNYIEALSRKYNVSYDNLRKLVNRYGAQM 430 Query: 433 -----------KAAESGVSRPVPQL-KRTTMRILIGLLVQNPELATLVPPLENLDENKLP 480 + E + P+ + + +IL+ L+ + + + + D+ Sbjct: 431 TVVNVAKETRDREKEQNAKKGKPEEGMQKSQKILLTWLIDDSKAFDQIRGIITADDFTEE 490 Query: 481 -GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE--QTFTD 537 + + S+ +T +++ + + L + AE + F D Sbjct: 491 LYREVANMVFEQYESEHKVTPAKIINRFESKELQTEVAGLFSTSIQLEMTEAERRKLFAD 550 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLE--LWTLNQEL 578 ++ + + L++ ++ I L N + + L L+ L Sbjct: 551 TVVRVKRASLDIAYKKAIEDNDIMALQNVMKEQHGLEKLHSSL 593 >UniRef50_Q8D285 DnaG protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D285_WIGBR Length = 582 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 248/584 (42%), Positives = 372/584 (63%), Gaps = 5/584 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M I +FIN LL +I++LI + + LKK GKN+ A CPFH EKTPSF+V+ EKQF+H Sbjct: 1 MNAYISNLFINRLLENINIIELISSIINLKKSGKNYFALCPFHQEKTPSFSVSYEKQFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQL 119 CFGCG HGNAIDFLMNY+ L F+E++EEL+ + E +R +Y+L Sbjct: 61 CFGCGIHGNAIDFLMNYNNLTFIESIEELSNIAGFAFKKAQSKKIINNEELKKRSDIYKL 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ ++ Y++ L + A YL RGL+ + I F+IGF+ + + + +N Sbjct: 121 MNQVSMIYKKILNSKIFIEANDYLNNRGLNIDSIEEFSIGFSSININIL-NYLKQSLQNF 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L +G+ + N++ + + F+ R+M P++DK G VI FGGR + N PKYLNS ET IF Sbjct: 180 YLLKSSGIFLINEKKKLSNIFKNRIMIPMKDKYGNVIAFGGRSINNFFPKYLNSKETLIF 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K LYG+YE ++ + ++L+VEGY DV++L+QYGI Y+VASLG TT I+++FR Sbjct: 240 KKSNYLYGIYEIKKRKIKILKILLVEGYFDVISLSQYGIYYSVASLG-CTTPFQIKIIFR 298 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN +ICCYDGD AGR +AW+ L +L Y+ DGR++ F+FLP+ EDPD+L+RK GK++FE Sbjct: 299 LTNKIICCYDGDSAGRRSAWKTLINSLSYLEDGREIFFIFLPNNEDPDSLIRKIGKKSFE 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E A P+S+FLF++L+ + +L DG+ + L LP+I ++PG+ LR+Y+R+E+G K+ Sbjct: 359 ILIEDAKPMSSFLFDTLIKKSNLYHLDGKVKFIKLILPIIKKIPGKNLRLYIRKEIGYKI 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLV--PPLENLDEN 477 GIL+D QLE+ + + K M LIGLL+QNP+L+ L+ L Sbjct: 419 GILEDYQLEKFLSLKEIKYKKNKQIKYKNNIMNTLIGLLIQNPKLSKLISKKNEIKLYNI 478 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ + F EL+ C + + T Q+LEHYRG LE L++WD + +N+ +Q F + Sbjct: 479 RIKEIPFFIELIKICKNNTNINTSQILEHYRGKKYHNHLENLAIWDHMISENLIKQIFIE 538 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 +L+ ++ +L RQ LI+R R LS EE+ ELW +N++L+KK Sbjct: 539 TLSSLYKIILVSRQNILISRARIQDLSVEEKKELWCINKKLSKK 582 >UniRef50_B0PFC1 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PFC1_9FIRM Length = 586 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 155/566 (27%), Positives = 252/566 (44%), Gaps = 34/566 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP +F+ +L +DI ++ + V+LK++G+ + CPFH+EK+PSFTV + Q ++CFG Sbjct: 1 MIPDLFLQELKNNSDIEQVVSSYVRLKRRGRIANGLCPFHSEKSPSFTVYPDNQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I F+ + LE+VE V LA + +P E + + +Y L L Sbjct: 61 CGAGGDVITFIRKIENLEYVEAVRFLAQRAGMAMPEEVADDGA---AKMKMRIYALNRAL 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L+ P YL +RGL++ I F +G+AP WD +K L+ Sbjct: 118 ARHFHDCLKSPAGKPGLDYLHERGLTNRTITHFGLGYAPEAWDGAVKFLRSQGYRDDELL 177 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 A + G YD+FR RV+FPI D RG V+GFGGR++G+ PKYLNS +T +F K Sbjct: 178 AAAVAARGRSGGLYDQFRGRVIFPIIDLRGNVVGFGGRIMGDARGPKYLNSSDTPVFKKS 237 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R L+ L A+ + L++ EGYMDV+A+ Q G + AVA+LGT+ T + +L+ + Sbjct: 238 RNLFALNFAKAS--KRGGLILCEGYMDVIAMHQAGFDNAVATLGTALTPEQSRLIAQYAQ 295 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YD D G+ A RA+ G ++R + + +DPD ++K G E F + Sbjct: 296 EVVLSYDSDGPGQAATKRAVSLL---GETGVKIRILSMTGAKDPDEYIKKFGAERFSLLL 352 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 A + + L + D T +G+ L+ VP R + +L + Sbjct: 353 SGASNATEYEIEKLRRKYDCDTAEGKVAFLREFAALMVSVPNAVERDVYVSKTAAELEVS 412 Query: 423 DDSQLERLMPKAAESGVSR--------------PVPQLKRT----------TMRILIGLL 458 + +L + + R P Q + ++ +L Sbjct: 413 KSAIETQLKYEQKRAAKRRRGDASQLRVYSEAGPAEQRRDPQRARYIRYALAEDKILAIL 472 Query: 459 VQNPELATLVPPLENLD-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 ++NP+ LD L + L + + L AA Sbjct: 473 MKNPDYYEHAAQRIGLDGFVTDRNRALAKVLFERLAAGQSVELPLLSAQLDEEQMAAAAG 532 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMF 543 L+ + ++ D+L Sbjct: 533 LLNSISGLTFGPEDLDSYIDTLLSFK 558 >UniRef50_B2KBW9 DNA primase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW9_ELUMP Length = 578 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 174/583 (29%), Positives = 267/583 (45%), Gaps = 15/583 (2%) Query: 5 IPRVFINDLLARTDIVDLIDARVK-LKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + I ++ R DIV+L+ V LK+ GK + CCPFHNEKTPSFTV+ ++ ++CFG Sbjct: 1 MSDKIIEEIRDRVDIVELVREYVPSLKRAGKTYKGCCPFHNEKTPSFTVSQDRGLFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G+ FLM + L F E ++LA LE E + R + + L +D Sbjct: 61 CQTGGDVFAFLMKTENLSFSEAAKKLAERAGLEWKKEEVLTQEEKNRLEARKL---LDFA 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 FY ++L AR YL+KR L+ E + +F IGF P G D + K N N L Sbjct: 118 KVFYNKTLLSSQGNEARGYLKKRSLTKETVEKFEIGFTPQGVDALSKAALANGYNANLLR 177 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+ G D FR R+MFPI + RG +GFGGR+ G PKYLNSPET +F K R Sbjct: 178 SAGLAAQGQYG-VRDYFRSRIMFPIINHRGETVGFGGRIFGEGEPKYLNSPETILFSKSR 236 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A + + N +++EGYMDV+ + Q GI VA LGTS +H +LL R + N Sbjct: 237 VLYGLNFAGPEIRKANYSILLEGYMDVIGVMQSGIGNCVAPLGTSFNEEHAKLLKRYSEN 296 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFL-PDGEDPDTLVRKEGKEAFEARM 362 + +D D AG A+ R AL + G ++ L +G DPD + K GKE FE + Sbjct: 297 AVILFDPDAAGIKASLRT---ALILIQQGLFVKVATLGEEGLDPDEFINKYGKEKFENIL 353 Query: 363 EQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 A+ + F + L+ Q + TP + +++ + ++S P ++ + + KL + Sbjct: 354 ADAVDIIDFQADVLIKQHGGNLTPQNKTQIAAQLMEIVSVQPDPIVKSEWIKIVSEKLSV 413 Query: 422 LDDSQLER---LMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 + + + + + L+ L+++P T L+ Sbjct: 414 EEHLLTPKKTAVNTRRNTPPAPQVKKTNIPVEEEDLVAWLLKSPAHITQAQELDESKFTS 473 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 + + P + + + + K+SM D N A D Sbjct: 474 RACYEIISTMDEILKQTPSTENIAPMLIKKLPQHENFILKISMAATPKDFNPARD-IRDC 532 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + + L + L A + G+ + L EL K+ Sbjct: 533 AAKIERNYLSKKLAALKAEIKKMGVGSVPEALLRA-QNELQKQ 574 >UniRef50_C6VQS6 DNA primase DnaG n=7 Tax=Lactobacillus RepID=C6VQS6_LACPJ Length = 626 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 168/616 (27%), Positives = 264/616 (42%), Gaps = 43/616 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP + + + +I D I V+LKK GKN CPFH E+TPSF+VN +KQ +H Sbjct: 1 MANRIPEEKVEQVRSAVNIADFIGQYVQLKKAGKNLFGLCPFHEERTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP--FEAGSGPSQIERHQRQTLYQ 118 CF CG GN F+M+ + L F E V ++A ++++P + A S P+ + Q+ L + Sbjct: 61 CFSCGRGGNVFSFIMDLENLSFPEAVVKVADFGHIDLPASYTAQSQPAAPKDQQQADLLK 120 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 L YQ L + A +YL +RGL E I F IG+AP +L F + Sbjct: 121 LYADSAKMYQHILVNTELGEPALKYLHERGLDDETIKTFGIGYAPAN-QLLLDFFKEHQT 179 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPE 235 + Q L +G+ + N G DRF +RV+FPI+D GRVI F GR+L + PKYLNSPE Sbjct: 180 DYQLLRQSGLFIENQAGDLRDRFVDRVLFPIKDASGRVIAFSGRILKKSPNEPKYLNSPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F+K L+ A+ + +++ EG+MDV+A + GI VAS+GTS T + I Sbjct: 240 TKLFNKRSVLFNFDLARGPIRQQKSVVLFEGFMDVIAAYRSGIQNGVASMGTSLTDEQIY 299 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 +L R T+ + CYD D G+ A RAL+ L + +PDG DPD +R +G+ Sbjct: 300 MLERVTDTLYVCYDSDMPGQKATDRALKLLG--GNSRLNLGVIQMPDGMDPDEYLRAQGQ 357 Query: 356 EAFEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F E +AF L ++L + L ++Q+ + + Sbjct: 358 EKFVQVFEDGKQTPTAFEMQYLKHDLNLQNTPDQLTYLQAVLQQLAQLSSSVEQDLYLNQ 417 Query: 415 LGNKLGILDDSQLERLMPKAAESGVSR--------------------------------P 442 L + + D ++L + V R Sbjct: 418 LVAEFDLDKDDLKQQLRSLVGQQAVRRGGGHSDETQVAPPPAPAPLGPPPATVDGSTNSG 477 Query: 443 VPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQ 502 R+L+ L+ + ++ V + + + G Sbjct: 478 PLSRVEKAERLLLYRLLNDHDVWLRVMAIAGFHFVHDSYQQILVYAEAYFKTHNQFDLGN 537 Query: 503 LLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG 562 + ++ + L D +++ D +N + + + Q E T Sbjct: 538 FTDFMTDSDLQPVVTSLEFMD--VANESSKEEIADLVNVIMNQQPLVEQINSKKAELTAA 595 Query: 563 LSNEERLELWTLNQEL 578 R + L L Sbjct: 596 KQIGNRDLVQQLTLAL 611 >UniRef50_C6NRS5 DNA primase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRS5_9GAMM Length = 586 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 207/589 (35%), Positives = 307/589 (52%), Gaps = 20/589 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R + FI+ +LAR+DI+ LID+RV LKK+GK++ +CCPFH EK+PSF+V+ EKQ Y+CFG Sbjct: 3 RFSQAFIDTVLARSDILRLIDSRVSLKKKGKDYWSCCPFHQEKSPSFSVSPEKQIYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C AHGNAI FLM Y++L FVE V LA + +P E + E + + +++ Sbjct: 63 CHAHGNAIGFLMAYERLSFVEAVSLLAEEAGIPLPQE-----GRPEGPDPRPVRAILEAA 117 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 Y+++L A+ Y +RGLS F +GFAP + R G N R+ L+ Sbjct: 118 EKLYREALHSH--PPAQAYWRQRGLSEATWNHFGLGFAPDQAQFLTSRLGQNSAQRELLV 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG++ D GR YDRFR RV+FP+RD RG++ GF GR PKYLNSPET ++HKG+ Sbjct: 176 AAGLVSRRDDGRYYDRFRARVIFPLRDGRGQLCGFAGRSTDGREPKYLNSPETILYHKGQ 235 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A++ R+++VEGY+DV+ L Q G+++AVA+ GT+ T +++L+R Sbjct: 236 MLYGLDLAREGIRRRRRVVLVEGYLDVITLHQAGLDFAVAASGTALTDKQLEILWRTAGE 295 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 ++ C+DGD AGR AAWRAL+ A + GR LR +FLP+GEDPD+LVRK G AFE + Sbjct: 296 IVLCFDGDAAGRAAAWRALQLAPARLRPGRLLRVLFLPEGEDPDSLVRKGGAAAFEEILA 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA P + L + DL D +A+ A ++QV LR Q L G+ Sbjct: 356 QARPALDHHLSVLRERYDLKKADEKAQFLGEARAFLAQVQDADLRAVYGQRLEEIAGV-- 413 Query: 424 DSQLERLMPKAAESGVSRPVP-----QLKRTTMRILIGLLVQ---NPELATLVPPLENLD 475 L + +A +PVP + + + + LL+Q +P L L Sbjct: 414 AVVLPKTSAQAFPESAPKPVPVKAKRPGRPSLCQAALRLLLQRPVDPHWQQLERRLLVYL 473 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 ++ + + + + + L + L + + ++ Sbjct: 474 RDEDTHAEVLADGLEILSESTHIGSQALFARLAARWDLDALFREQFAPSVGSDEGSQSEV 533 Query: 536 TDSLNHMFDSLLELRQE---ELIARERTHGLSNEERLELWTLNQELAKK 581 D + + L + R R LS EER EL + + K Sbjct: 534 RDCVARLNLQLTQARIRFIGRTADRAGLAALSPEERQELLRITKGRRSK 582 >UniRef50_C2ESB3 DNA primase n=1 Tax=Lactobacillus vaginalis ATCC 49540 RepID=C2ESB3_9LACO Length = 616 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 166/610 (27%), Positives = 277/610 (45%), Gaps = 48/610 (7%) Query: 17 TDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMN 76 DI D+I V+L + GK F CPFH E+TPSF+VN +KQF++CFGCG GN FLM Sbjct: 1 MDISDVIGHYVQLHQSGKGFVGLCPFHEEQTPSFSVNEQKQFFYCFGCGRGGNVFQFLME 60 Query: 77 YDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ----TLYQLMDGLNTFYQQSL- 131 + F E V E+A + N+++P + + + + L + + Y L Sbjct: 61 LKHIPFTEAVAEVAQLANVDLPSQYLNNGDRSIHQENNTPNGKLMVMHEEAAKLYHHILM 120 Query: 132 QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 P A +YL+ RG++ E+I F +GFAP + + Q L +G+ V + Sbjct: 121 NTPAGAQALKYLKGRGMTDELINDFNLGFAPEQR-ILKPFLEQKINDYQLLRKSGLFVED 179 Query: 192 DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPETDIFHKGRQLYGL 248 + G +DRF +RVMFP+R++ GRVIGF GRV+G DTPKYLNSPET IF+K R L+ Sbjct: 180 NNGGLHDRFVDRVMFPLRNQNGRVIGFSGRVIGKVPADTPKYLNSPETPIFNKRRTLFNF 239 Query: 249 YEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCY 308 A+++ +++ + EG+MDV++ G VAS+GTS T + + +L RA V CY Sbjct: 240 DIARKEARGTSKIYLFEGFMDVISAYSAGAKNGVASMGTSLTEEQVGILGRAVRQVDICY 299 Query: 309 DGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM-EQAMP 367 DGD AG++A RA+ + G QLR + LP G DPD V++ G + F + +Q Sbjct: 300 DGDSAGQNAIDRAVTLFRDHQPQGMQLRVVQLPAGIDPDEYVQQNGADKFAKYLVDQEET 359 Query: 368 LSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQL 427 F +L+ +L L++ + + +L + + + Sbjct: 360 PVDFYLRFYRLNKNLNNQTELISYLEQSLKLLATLSSSLEQDMYLTQLAKEFDLDKATLK 419 Query: 428 ERLM--------------------------------PKAAESGVSRPVPQLKRTTMRILI 455 +L A+ + R + ++L+ Sbjct: 420 SQLQDISRRLGGRKRHSQPASLPQNEGSSSGFSVGPGPASSPALQRNPIKRTELAEQLLL 479 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAAT 515 + + E+ V + + L+ + + L+++ + + +T Sbjct: 480 RYMFHDQEVWDHVAAINDFHFAHERYQTLYLLAESYFSEHGEYSAAGLMDYLKEDSLRST 539 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHMFDSL-LELRQEELIARERTH-GLSNEE--RLEL 571 L ++ + D + Q D + + + + L + +EL ++ R L+N E Sbjct: 540 LGQIEQLN--VDDVVNMQLIDDCVQLIQEQIPLSQKIKELQSQIREASSLNNSELATQLT 597 Query: 572 WTLNQELAKK 581 L + L K+ Sbjct: 598 MKLIKLLKKQ 607 >UniRef50_C7MD61 DNA primase n=6 Tax=Actinomycetales RepID=C7MD61_BRAFD Length = 658 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 173/653 (26%), Positives = 282/653 (43%), Gaps = 81/653 (12%) Query: 1 MA-GRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQF 58 MA G I R ++ + R + +++ V L+ G + CPFH+EKTPSF + + Sbjct: 1 MAQGLIRRSDVDLVRERARLDEVVSEHVTLRTAGIGSMKGLCPFHDEKTPSFNIRPQLGH 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGP--SQIERHQRQTL 116 +HCFGCG G+ I F+ + L FVE VE LA + +++ +E ++ + R+ L Sbjct: 61 WHCFGCGEGGDVISFVQKINHLSFVEAVEMLAGRYGVQLQYEDAGQGRGNRPDFGTRRRL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 +Y++ L P A R++L +RG + A F +GFAP GWD++ Sbjct: 121 LDAHAIAEEYYREQLGTPAAEVGRRFLTERGFDQDAAAHFGVGFAPEGWDSLTGVLRSRG 180 Query: 177 ENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSP 234 L +G++ +G YDRFR R+++PIRD G IGFG R L + PKYLN+P Sbjct: 181 FTEAELTASGLVSQGQRG-VYDRFRGRLVWPIRDITGNTIGFGARRLLDSDQGPKYLNTP 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET I+HK LYGL A++ + +R++VVEGY DV+A G+ AVAS GT+ A+H+ Sbjct: 240 ETAIYHKSSVLYGLDIARKAISSQHRVVVVEGYTDVMAAHLAGVTTAVASCGTAFGAEHV 299 Query: 295 QLLFR-------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQL 335 +++ R V+ +DGD AG+ AA RA E ++ Q Sbjct: 300 KIVRRVMGDSNPSAGLRLNTDGRGLAGEVVFTFDGDAAGQKAALRAFEEDQRFVA---QT 356 Query: 336 RFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLA 395 G DP L +G +A +E PL F + + QVDL T +G+ +A Sbjct: 357 YVAVEASGMDPCELRIAQGDQAVRDLIETRRPLFEFAIRTAISQVDLDTVEGQVTALRMA 416 Query: 396 LPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRT------ 449 P+++++ +R + L LG+ + + L + A G + RT Sbjct: 417 APVVARIRDRAMRPEYARRLSGWLGMDEATVLRAVHDAARSQGRAPQPATPARTVAEGQG 476 Query: 450 ------------------------------TMRILIGLLVQNPELAT------------L 467 + +++Q+P+L Sbjct: 477 GAGQGSSAEDAPIPSARLADVVSPRDPVGQVETQSLAVMLQSPQLLEDEKVASLPDDAFH 536 Query: 468 VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 VP L+ + + L L + + L Q+LE T +E ++ D Sbjct: 537 VPALQGVWDVMLAAGTLLDAVQGRLHAARYLE--QVLEIAGETVRPLIVEIANLDLPARD 594 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + L+ + + + L R + S+ ER + LA+ Sbjct: 595 EEGLRRLAHSLLDRLTELSITREYSVLKQRLQRTDPSDAER--YQDIMARLAQ 645 >UniRef50_Q03F67 DNA primase n=2 Tax=Pediococcus RepID=Q03F67_PEDPA Length = 620 Score = 496 bits (1278), Expect = e-139, Method: Composition-based stats. Identities = 161/612 (26%), Positives = 271/612 (44%), Gaps = 38/612 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I+D+ DI D++ V+L+K GKN CPFH+EKTPSF+V+ KQ +H Sbjct: 1 MAGMIPEDVIDDVRTSVDIADVVGRYVQLRKAGKNLFGVCPFHDEKTPSFSVSESKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQL 119 CF CG GN FLM+ + L F E+V +A N+ + S ++ L L Sbjct: 61 CFSCGRGGNVFKFLMDLENLSFPESVRRVAEFGNIPLDQSYFKSTKKSSYTSEQSALIDL 120 Query: 120 MDGLNTFY-QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + + L + A QYL+KRG++ + I F IGFA P + +L F + + Sbjct: 121 YEKASELFSHILLNTKLGEDALQYLKKRGMTEDDIKNFDIGFAAPEDNLLLSFFKEHKID 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + + ++G+ + ++ DRF R++FPI+D G+++ F GR L + PKYLNSPET Sbjct: 181 QHLMAESGLFIESENQTLRDRFFNRIIFPIKDTNGKIVAFSGRSLVKDKNHPKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 IF+KG+ LY +A+ + + +++ EG+MDV+A + + +A++GTS T DHI Sbjct: 241 SIFNKGKVLYNFSQARSEIIQQKTVILYEGFMDVIAAHRAAVKNGIATMGTSLTEDHINA 300 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 + R + VI C+DGD G+ A RA+E + Q+ +F+PD DPD V + G Sbjct: 301 IKRVADRVIICFDGDAPGQKAIARAIELLRQ--SSDLQISVVFIPDNLDPDEYVNQRGTA 358 Query: 357 AFEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF+ M+Q ++FL ++L+ + + AL IS + + +L Sbjct: 359 AFQNLMQQTGESSTSFLLKYDRTGLNLANENDQLEYLKRALKRISSLKDALEQDLYLNQL 418 Query: 416 GNKLGILDDSQLERLM----------PKAAESGVSRPVPQLK------------------ 447 ++ I ++L PK E S P P + Sbjct: 419 SDEFKIDKRDLKDQLRESVADRIAHAPKQFELEASMPPPPPEAMGDQPVFNQNIQKKLSK 478 Query: 448 -RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEH 506 + L+ + N ++ + L N ++ +++ Sbjct: 479 IDISEYRLLARALNNHDVWLKLQSLPNFYFPNEKLETIYVLASGYLEKNHEYNVADFMDY 538 Query: 507 YRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 + A + + E+ D L+ + + Q + + Sbjct: 539 LKEDELQAVVADI--ESINLSPEFTEEEIQDYLSVIENFAPLSEQISNVKLDLDEATRLG 596 Query: 567 ERLELWTLNQEL 578 + L +L Sbjct: 597 NKELQQQLTLKL 608 >UniRef50_D1CD76 DNA primase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD76_THET1 Length = 623 Score = 496 bits (1277), Expect = e-139, Method: Composition-based stats. Identities = 189/606 (31%), Positives = 278/606 (45%), Gaps = 37/606 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 R I ++ +R DIV++I + V+L++ G F A CPFH EKTPSF V E+Q YHCFGCG Sbjct: 6 RTIIEEIKSRIDIVEVIGSFVELRRTGSRFKALCPFHQEKTPSFIVFPERQTYHCFGCGK 65 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I FLM L F E VE+LA V FE + + + +LY++ Sbjct: 66 SGDVISFLMETQNLSFREAVEQLAQKAG--VRFEPEKPKEKSPQSEIDSLYEINKLAARL 123 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + L A AR YL+ RGLS + +G+AP WD K + + A Sbjct: 124 FNHLLMNSKAAEHARDYLKDRGLSPATWEEWMLGYAPDSWDVTSKFLQKRGFSEDLIFKA 183 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 G+ V G YDRFR+R+MFPI+DK GR +GFGGR +G PKY+N+PET IF KG + Sbjct: 184 GLTVERTGGGYYDRFRDRLMFPIKDKDGRFVGFGGRAIGEGIPKYMNTPETPIFTKGEHI 243 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YG+ A+ E N ++VVEGY+DV+ QYG VA+LGT+ T H++LL + N+ Sbjct: 244 YGIDVAKSAIKESNLVVVVEGYVDVITAHQYGFRNVVATLGTAITPSHVKLLSKMAANIC 303 Query: 306 CCYDGDRAGRDAAWRALETA--------LPYMTDGRQ----------LRFMFLPDGEDPD 347 D D AG+ AA R E +P + GR ++ LP GEDPD Sbjct: 304 LALDADTAGQAAALRGWEVLRDSIRRRSIPIRSKGRVISSDSKLEVLVKIATLPKGEDPD 363 Query: 348 TLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETL 407 TL+RK+ E + +E A + F + DL TP G+ + P+I + Sbjct: 364 TLIRKDPSE-WARIIEGAKTVIDHFFEIVERGYDLKTPQGKTQAIADLAPVIGDLGNPIE 422 Query: 408 RIYLRQELGNKLGILDDSQLERLMPKAAESGV-----SRPVPQLKRTTMRILIGLLVQNP 462 R + L +G+ ++ ++ +S + P+ + +++ LL++ P Sbjct: 423 RAHYESRLAKLVGVDENEIHLHVVQARKQSSRPGGGEAAPINLNSVSQEEMVLALLIRYP 482 Query: 463 ELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT--NNAATLEKLS 520 L +P D P + ++ L LT LLE + + L L+ Sbjct: 483 RLLGNLPEDFINDMENSPNKEILEKM--QTLGHEKLTPESLLESVDESLRQHVERLVALA 540 Query: 521 MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEE---LIARERTHGLSNEERLELW---TL 574 N +N + L + L+ G R L TL Sbjct: 541 STQPELFSNEQLLELNKKINLIRRQRLRDLLHQHSLLLKEAMEQGDEESVRSLLQLVPTL 600 Query: 575 NQELAK 580 EL + Sbjct: 601 ASELRQ 606 >UniRef50_Q73N11 DNA primase n=2 Tax=Treponema RepID=Q73N11_TREDE Length = 595 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 159/583 (27%), Positives = 282/583 (48%), Gaps = 18/583 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 +I ++ + TDIV L++ +L+K+G N+ CCPFHNEKTPSF V +K+ Y+CFG Sbjct: 3 KISSKTVDAVTEMTDIVSLVENYTRLEKRGANWWGCCPFHNEKTPSFNVVPDKKMYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C G I+FLM +KL F+E VE LA +EV +E GS + + L D + Sbjct: 63 CHKGGGTINFLMEMEKLSFMEAVERLAKNAGIEVIYEGGSYVPDEGAKIKDQILDLYDKV 122 Query: 124 NTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + L Q P A YL R +S E+I +F +G++P + ++ L Sbjct: 123 AGSFHFLLTQNPTGKKALDYLLSRNVSPEIIEKFNLGYSPKDRKWLHSFLLSKNYSQDFL 182 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 G+ N + F +R+MFPI D+ G+ I FGGR+L D KYLNS + + KG Sbjct: 183 EKTGLFSKNYKKM--AFFSDRLMFPICDRHGKTIAFGGRILEGDGAKYLNSSDMPQYKKG 240 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++ + A + + +++ EGYMDV+A Q GI AVA LGT+ T D ++LL Sbjct: 241 ETVFAFHHALAEIRKSKSVILCEGYMDVLAFFQAGIENAVAPLGTALTEDQVKLLKSFAE 300 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 +D D+AG++A+++A++ + G +R +++ DG+DP +++K+GKE + + Sbjct: 301 TFYLAFDSDKAGQEASYKAIKIC---RSMGVNVRVLYIKDGKDPSEILQKKGKEGLKFLL 357 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 E A+ +L + D+S+P+G+A P I + + R +L + G+ Sbjct: 358 ECAIVDDDYLIQIASMRFDISSPEGKASAIAFLFPYIEVLESDIQRESAISKLSSAFGVS 417 Query: 423 DDSQLERLMPKAAE-------SGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 + + + + +PV +R+++ + N +L + + + D Sbjct: 418 QQAIFSDYVNREKKALRHIVDEVKQKPVDIRMNAELRLVLAVTA-NTDLFSRLRSQLSPD 476 Query: 476 ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTF 535 + + ++ C T L+ + + + A +E+ Sbjct: 477 DFEDFYARHLFIVLEECYRDGAYTYANLMHRCGEEKLKEIVSQTISKGEFA--ENSEKIV 534 Query: 536 TDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 D +N + ++L+ +++++I R R L E+ ++ L +EL Sbjct: 535 DDGINFIKQNVLQKQKDKIIGRLR--LLHGEKNIDTVNLTKEL 575 >UniRef50_B6BW93 DNA primase n=1 Tax=beta proteobacterium KB13 RepID=B6BW93_9PROT Length = 578 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 207/583 (35%), Positives = 316/583 (54%), Gaps = 21/583 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI ++L R D+VD++D RVKLKK G N+ ACCPFH EK+PSFTV+ KQFYHCFG Sbjct: 1 MIPESFIQEILNRIDVVDVVDQRVKLKKAGANYVACCPFHQEKSPSFTVSPSKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+AI FLM YD L F+E+V+ +A L VP + + + ++ L +++ Sbjct: 61 CGAHGSAISFLMEYDGLTFIESVQSIANQLGLAVPNDQSNV--KKDKADEFKLEEILKRA 118 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 N ++++L+ + A YL+KRGL+ V F IG+A W + K F L Sbjct: 119 NQHFKKNLRS--SELAINYLKKRGLTGTVAREFQIGYASDDWQGLKKEF--ENYEEPKLQ 174 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHKG 242 AG++ ND G+ YDRFR R++FPI + + +IGFGGRV+ D PKY NSPET +F K Sbjct: 175 TAGLVQKNDSGKIYDRFRNRIIFPIINAKDNIIGFGGRVINKEDQPKYYNSPETPLFKKS 234 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++YGL +A++ E N +L+VEGYMDV++L Q+GI AVA+LGT+TT H++ L R + Sbjct: 235 YEVYGLPQAKKGIREDNNILIVEGYMDVISLYQHGIENAVATLGTATTIYHLKKLIRYSK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 + C+DGD AG++AAW+AL TA+ + D + F+FLP+GEDPDT + K + F+ + Sbjct: 295 KITFCFDGDHAGKEAAWKALNTAVEILEDDYEFYFLFLPEGEDPDTFITKNSIQDFKKYI 354 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + A PL+ F+ L + DL++ + + + P+ ++ +I+L + + + + Sbjct: 355 DHATPLTEFIVKRLTEKNDLTSQENKIKFINNFEPIYKKINSNKYKIFLIKRIADLIHFS 414 Query: 423 DDSQLERLMPKAAESGVS------RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDE 476 + + ++AE+ S P + T R I +LV PEL E + Sbjct: 415 QREIEKMMRIESAENYSSSQQIKYSPSTRNSLTAKRKYILILVMKPELFN--SDDEVFFQ 472 Query: 477 NKLPGLGLFRELVNTCLSQPG--LTTGQLLEHYRGTNNAATLEKLSMWDDIADKN-IAEQ 533 + L LF ++ T LL + L +L +N + Sbjct: 473 SNLIEDELFNKIKKLLEENDSNIKNTASLLHSLVNKVDENILNELQKQMMDYSENIDLLE 532 Query: 534 TFTDSLNHMFDSLLELRQEELIARERT---HGLSNEERLELWT 573 F N L + +Q + A + LS+EE+ L Sbjct: 533 EFKGIQNSFSHQLNKTQQSQQFAALKNKKLSELSDEEKEFLKN 575 >UniRef50_B0MWR2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWR2_9BACT Length = 658 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 160/550 (29%), Positives = 247/550 (44%), Gaps = 18/550 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I+ + A +IVD+I V LK++G N+ ACCPFHNEKTPSF V+ K Y CFG Sbjct: 1 MIDRETIDRIYAAANIVDIIGEYVTLKRKGVNYQACCPFHNEKTPSFVVSPSKGVYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNA+ FLM ++ + + E ++ +A + +EV + + R++++ + Sbjct: 61 CGKGGNAVTFLMEHENMTYPEALKAVAKRYGIEVREKEMTPEEVARNDNRESMFVVNSWA 120 Query: 124 NTFYQQSLQQPVAT--SARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ L Y +KRG S I +F +GF P D + + Sbjct: 121 AEYFSNYLLHETEGMSVGMTYFRQKRGFSDATIKKFGLGFCPARGDRMSWAALAAGYKEE 180 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 L+ G+ + D G +DRFRERVMFP+ + GRV+ FGGR L KY NSPE++I Sbjct: 181 FLVSTGLSIKRDDGSLFDRFRERVMFPVHNISGRVVAFGGRTLRTDKSVAKYQNSPESEI 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K R+LYGL+ A++ + + ++VEGY DV+++ Q G+ VAS GTS T + I+LL Sbjct: 241 YSKKRELYGLFFAKKAIQQYDFAIMVEGYTDVISMHQAGVENVVASSGTSLTTEQIRLLG 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T N+ YDGD AG A+ R ++ L +G +R + LP +DPD+ R Sbjct: 301 RFTRNITVIYDGDSAGIHASLRGIDMIL---REGMNVRVVLLPPEDDPDSFARTHTAAEV 357 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + F L+ P +A L + I Q+P R +E Sbjct: 358 QEYIRANEEDFLTFKAKLLLKDA-AGDPIKKAALINDMVQSIVQIPDPIQRSVYIKECAR 416 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQ-LKRTTMRILIGLLVQNPELATLVPPLENLDE 476 + I ++ + + K S R + ++R + R Q PE Sbjct: 417 IMDIDENLLIAEVGRKRMASTGDREAEEFVRRQSARFRAEQTAQRPETV-----FAGQVT 471 Query: 477 NKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFT 536 L REL L + + R E + D + F Sbjct: 472 GGSSAEALERELTRYLLKYGHCSFD--FKEGRNVVQYNVAEVIFGELDADGLEFQNRVFN 529 Query: 537 DSLNHMFDSL 546 + L + Sbjct: 530 EILRVYREQW 539 >UniRef50_D1BUG1 DNA primase n=3 Tax=Micrococcineae RepID=D1BUG1_XYLCX Length = 642 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 169/641 (26%), Positives = 272/641 (42%), Gaps = 65/641 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R + + R I +++ A V LK G + CPFH+E+TPSF V Y Sbjct: 1 MAGLIKREDVEAVRERARIEEIVSAHVTLKPAGVGSLKGLCPFHDERTPSFHVRPGVGRY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGS-----GPSQIERHQRQ 114 HCFGCG G+ I F+ D L F E VE LA +++ +E + E +RQ Sbjct: 61 HCFGCGESGDVIAFVQKTDGLGFAEAVEYLADRVGVQLRYEDSRGGDSGPARREEPGRRQ 120 Query: 115 TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 L + FY L P A + R++L +R +F +G+AP GWD + + G Sbjct: 121 RLVEANRVAAEFYSAQLFGPDAAAGRKFLAERSFDRSDAEKFGVGYAPTGWDALTRHLQG 180 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLN 232 + L+ AG++ +G YDRFR R+++PIRD G V+GFG R L + PK+LN Sbjct: 181 KGYTQAELVAAGLVSQGQRG-VYDRFRGRLVWPIRDTTGAVVGFGARRLYDDDQGPKFLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 +PET ++ K + LYG+ A++ A R++VVEGY DV+A G+ AVA+ GT+ D Sbjct: 240 TPETVLYKKSQVLYGIDLAKKAIARDKRVVVVEGYADVMAAQLSGVETAVATCGTAFAGD 299 Query: 293 HIQLLFR------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ 334 H +++ R VI +DGD AG+ AA RA Q Sbjct: 300 HAKIVRRLMGDFGAGGGLQLASGQSLGGEVIFTFDGDAAGQKAAVRAFG---EEQRFHAQ 356 Query: 335 LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTL 394 DG DP L +G +A +A ++ +PL F+ ++ DL T +GR Sbjct: 357 TFVAVAADGMDPCDLRIAKGPQAVKALVDSRVPLFEFVIRKVVEGYDLDTVEGRIGALRE 416 Query: 395 ALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESG---------------- 438 A PL++ + +++ + L G+ D + Sbjct: 417 AAPLVAGIRDRAMQLGYTRSLARWTGMDTDEARREVARAGERPRTPDRSTRAADPVAVVP 476 Query: 439 ---VSRPVPQLKR---TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC 492 + P+P + T R+ + +++Q P+ V + D +P + Sbjct: 477 APAPTMPLPDPRDPVARTERMALVVVLQYPQHVPPVFDELSEDAFAVPAWRAVHAAIRAA 536 Query: 493 LSQPG---LTTGQLLEHYRG---TNNAATLEKLSMWDDIADKNIAEQTF-TDSLNHMFDS 545 ++ G + + A +++L++ D+ A F D + + D Sbjct: 537 GGAAAGRTMSGGAWVGAVQEQAGELVAGLVDQLAVAPLPEDREDAIARFVADVVRAVQDL 596 Query: 546 LLELRQEELIARERTHGLSNEERLELWT-----LNQELAKK 581 L + +R E L+ E ++ Sbjct: 597 GLTRLIADAKSRLL-RLDPGAEPQAYREAFQTLLSMEAQRR 636 >UniRef50_A1BE31 DNA primase n=10 Tax=Chlorobiaceae RepID=A1BE31_CHLPD Length = 636 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 182/620 (29%), Positives = 272/620 (43%), Gaps = 48/620 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ I+D+ TDIVDLI VKL G+N+ A PF EKTPSF V+ +KQ + CF Sbjct: 6 MIPQNIIDDIRRSTDIVDLIADYVKLHPSGRNYKALSPFTQEKTPSFVVSPDKQIFKCFS 65 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G GN F+M +K+ F E VE LA +++ + +I+ + ++ + Sbjct: 66 TGKGGNVYTFVMEMEKISFPEAVELLAKRTGIDISRF--TKQQKIQNEENESQTGTLRWA 123 Query: 124 NTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + +L+ P YL + RGLS +I +F IG+AP WDN++ +L Sbjct: 124 ARTFHNTLESPKGVQGLSYLTEARGLSRAIIQQFGIGYAPDQWDNLINEAKQASIPLANL 183 Query: 183 IDAGMLVT-NDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIF 239 + G+ ++G YD FR RV+FPI G+V GFGGR L +D TPKYLNSPE +F Sbjct: 184 TELGLTTHHKERGSWYDTFRNRVIFPIFSIGGQVAGFGGRTLDSDPRTPKYLNSPENPLF 243 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + LYGL+ A+ + L+VEGYMDV+AL Q GI AVAS GTS T ++L R Sbjct: 244 EKSKLLYGLHAAKDEIRRSESALLVEGYMDVLALHQAGITTAVASCGTSLTRYQAKILQR 303 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN V+ YD D AG+ + ++T +T+G + LP G+DPD+ V++ GKE F Sbjct: 304 YTNRVLFVYDADPAGKKSMMAGIDTL---VTEGITPFVLELPSGDDPDSFVQRAGKEEFL 360 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E F + + D +A+ I+ +P + QEL K Sbjct: 361 RYSEKNKQSFIDFQIRFFTQSGNFAQTDVKAKAIRAITHTIALIPDRIRQELYLQELSEK 420 Query: 419 LGIL----------DDSQLERLMPKAAESGVSRPVPQLKRT---TMRILIGLLVQ----- 460 LGI + + S +RP P ++ R + L++ Sbjct: 421 LGISFSSLKELLVIESTMRREKNIPGENSMRARPTPVPEKKMSVLERTFLKALLESSFYG 480 Query: 461 NPELATLVPPLENLDENKLPGLGLFRELVNTCLS-----QPGLTTGQLLEHYRGTNNAAT 515 N L L +F L+ S L + + Sbjct: 481 NAVLEFAASHENMLTLPNPLAQNIFTHLIRRYHSLSGSPNDHLDIISEISMFSEPEARNL 540 Query: 516 LEKLS-------MWDDIADKNIAE-----QTFTDSLNHMFDSLLELRQEELIARERTHGL 563 L W + D N +F D+ + L ++E L + R Sbjct: 541 ASGLLLDQPVSKKWHEQTDLNAENARQCLASFLDAFKSLVLEPLIRQKEILTEQIRNEND 600 Query: 564 SNEERLELWT---LNQELAK 580 + E L L++++ K Sbjct: 601 AALETELLREKITLDRKIRK 620 >UniRef50_A5VRL8 DNA primase n=52 Tax=Rhizobiales RepID=A5VRL8_BRUO2 Length = 681 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 194/633 (30%), Positives = 282/633 (44%), Gaps = 59/633 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I LI RV ++ N F ACCPFH EKTPSF K Sbjct: 28 RFPPSFLDEIRDRVPISTLIGTRVSFDRKKSNPPKGDFWACCPFHGEKTPSFHCEDRKGR 87 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ FL + + L F E VE +A M + +P + QR TLY Sbjct: 88 YHCFGCGVTGDHFKFLTDLEGLSFPEAVERVADMAGVPMPAR--DPEMEKREAQRATLYD 145 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M+ F++ LQ AR YL RGLS F +G+AP + + + G + Sbjct: 146 VMELAAQFFESQLQSATGAKARAYLRDRGLSTATQQAFRMGYAPESRNALKEFLAGKGVS 205 Query: 179 RQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPET 236 R+ + G++V + SYDRFR+RVMFPI D RGR+I FGGR L D P KYLNSPET Sbjct: 206 REQIEACGLVVHGEGIAVSYDRFRDRVMFPIEDLRGRIIAFGGRALSADAPAKYLNSPET 265 Query: 237 DIFHKGRQLYGLYEAQQDNAEP-----NRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 ++FHKGR LY A++ ++ VEGYMDV+ALAQ GI++ VA LGT+ T Sbjct: 266 ELFHKGRVLYNGLRARKACQPQGGEPAKPIIAVEGYMDVIALAQAGIHHVVAPLGTALTE 325 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 + ++LL+R + I C+DGD AG AA+RA + LP + G+ LRF LP+G+DPD LV+ Sbjct: 326 EQLELLWRISPEPILCFDGDGAGLRAAYRAADLGLPVLQPGKSLRFALLPEGQDPDDLVK 385 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 EG AF A + A PL ++ TP+ RA L + S++ E +R + Sbjct: 386 AEGPSAFHAVLRDARPLVEMVWTRETAGGVFDTPERRAELEARLREITSRIANEDIRRHY 445 Query: 412 RQELGNK----LGILDD-------------------------------SQLERLMPKAAE 436 Q++ + G + + L Sbjct: 446 SQDMRERAQAFFGQGRQGFQNGGQRSQSFTRRNEGARGRGGPAGSGRLAISDSLARSTLV 505 Query: 437 SGVSRPVPQLKRTTMRILIGLLVQNPELATL-VPPLENLDENKLPGLGLFRELVNTCLSQ 495 G + ++ L+ +P L L LD L +++ + Sbjct: 506 KGGRQGGAAHAPLRETAIVLTLLNHPRLIEEDFETLAALDLGHDALKTLHLAMLDVLAAG 565 Query: 496 PGLTTGQLLEHYRGTNNAATLEKLSM-----WDDIADKNIAEQTFTDSLNHMFDSLLELR 550 + + ++ L A AE ++L L R Sbjct: 566 RVDDGIAMRRALVDAGHGDLIKMLEQVVKGAKLWTATTLAAEDDAREALR--QALHLHQR 623 Query: 551 QEELIARER--THGLSNEERLELWTLNQELAKK 581 L R L +E EL+ +++ + Sbjct: 624 ARTLHKELRAVEAALETDETGELFARLRDIQNQ 656 >UniRef50_A3WCI7 DNA primase n=2 Tax=Erythrobacter RepID=A3WCI7_9SPHN Length = 617 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 194/599 (32%), Positives = 293/599 (48%), Gaps = 36/599 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA I + ++L AR + +I KL + G+ + ACCPFH+EK+PSF VN +K FYH Sbjct: 1 MA--ITPQWKDELRARITLSSVIMRTTKLTRAGREWKACCPFHDEKSPSFYVNDQKSFYH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I ++ L F++ +ELA+ +EVP A + +R L + Sbjct: 59 CFGCGAHGDVISWMTEQRGLSFIDACKELASEAGMEVP--APDPVAAKRAEKRAELVDVT 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ Q+L++ V A YL+KRGL E + F G+AP + Q Sbjct: 117 TEAQEWFVQNLREEVGREALDYLKKRGLKPETLREFGFGYAPESKQALPNALPR--FEDQ 174 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDI 238 L++ GM + D G +YDRFR RVM PI+D RGRVI FGGR+LG KYLNSP+T + Sbjct: 175 MLVETGMRIRTDDGTTYDRFRGRVMLPIQDTRGRVIAFGGRILGKREGVAKYLNSPDTPL 234 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KGR LY ++ A + + R++VVEGYMDVVALAQ G AVA +GT+ T +++L+ Sbjct: 235 FDKGRNLYNIHRAAPASRQSGRVIVVEGYMDVVALAQAGFEDAVAPMGTALTEMQLEMLW 294 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + C+DGD AG+ AA RA+ ALP + R L + LP G DPD L+ ++G A Sbjct: 295 RMVEVPVLCFDGDAAGQKAAMRAIGRALPLLAPMRSLGIVTLPTGLDPDDLINEQGPGAM 354 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E + Q M L FL+ + L++P+ +A L + + + ++ R+EL ++ Sbjct: 355 EKLLAQPMSLLDFLWQAERDAQPLASPEAKAGLKARLMAHVDTIEDRDIQALYRRELLDR 414 Query: 419 LG---ILDDSQLERLMPKAAESGVSRPV---PQLKRTTMRIL------------IGLLVQ 460 +R A +S + P P+ + T R + I L++ Sbjct: 415 FSAFAFPPREPRQRQQKGAWQSFKAVPKGLSPEARSTLQRAMGGGQRAGFQSAVIAGLIR 474 Query: 461 NPELATL----VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 PE + L LD + P + EL T SQ + +G Sbjct: 475 FPEEIERHSEALTRLARLDPDAAPAIESLIELSETLDSQAP----SAISDRQGHPAPPED 530 Query: 517 EKLSMWDDIADKNIAEQTFTDSLNHM-FDSLLELRQEELIAR-ERTHGLSNEERLELWT 573 ++ + A + ++++ + LE IAR + S E+ L Sbjct: 531 QRFAFLRKGTPPGEAREELAEAVSLLAQKPALEAAMAATIARFDEDPEGSFAEQARLRE 589 >UniRef50_B2GKV4 DNA primase n=5 Tax=Actinomycetales RepID=B2GKV4_KOCRD Length = 668 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 156/448 (34%), Positives = 238/448 (53%), Gaps = 13/448 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I+++ ARTDI ++++ V LK G ++ CPFH+E++PSF V + Y Sbjct: 1 MAGLIKREDIDEVRARTDIREVVEQYVTLKPAGIGSYKGLCPFHDERSPSFHVRPQMGTY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I FLM D F ETVE LAA E+ +E G P++ E +RQ L Sbjct: 61 HCFGCDESGDVIAFLMEMDHTPFTETVERLAARIGYELHYEQGGAPNREEVGRRQRLLDA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+Q++L A +A+++L +RG + + +G+AP GW ++L Sbjct: 121 HKVAAEFFQRNLYTRQAAAAQKFLGERGFDQDAARTYGVGYAPQGWSHLLNHLRNQGFTE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q L GM ++G YDRFR R+++PIR G VIGFG R L + PKYLN+PET Sbjct: 181 QELKLTGMFSEGNRG-LYDRFRGRLIWPIRAVAGEVIGFGARKLYEDDQGPKYLNTPETQ 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + LYG+ A++ A+ +++VVEGY DV+A G+ AVA+ GT+ +HI+++ Sbjct: 240 LYKKSQVLYGIDLAKRPIAKTKQVVVVEGYTDVMACHLAGVATAVATCGTAFGPEHIKIV 299 Query: 298 FRA------TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R V+ +DGD AG+ AA RA + ++ Q P+G DP L Sbjct: 300 RRFLSDDSAGGEVVFTFDGDAAGQKAALRAFQEDQRFVA---QTYVAVEPNGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G A +E PL F + + + D+++ +GR R P+++Q+ +LR Sbjct: 357 ARGDVAVRDLVETRTPLFEFALRATIKEYDVNSLEGRLRAMRACAPIVAQIRDSSLRPAY 416 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGV 439 +EL LGI D + + A + Sbjct: 417 ARELSGWLGIETDEVMRAVSAAAKSAQR 444 >UniRef50_Q2S3X9 DNA primase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3X9_SALRD Length = 655 Score = 494 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 168/649 (25%), Positives = 278/649 (42%), Gaps = 78/649 (12%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP I ++ D+V++ + V+LK+ G + CPFHNE TPSF+V+ ++ Y+ Sbjct: 1 MA--IPDEKIEEVRTAVDLVEVAEDYVQLKQSGSRYMGLCPFHNEDTPSFSVDPDQNLYY 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+A F+ + + F+E+V LA + + +P E + ++R+ + + Sbjct: 59 CFGCQNGGDAFKFVQEIEGVGFLESVRMLADRYGVPLPEEETDPDA---ANEREAVLHAL 115 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F+ + L Q A YL +RG + + I +F +G+AP WD +L +R Sbjct: 116 RFAARFFYRQLTQSDRGRPALDYLRRRGFTPQTIKQFGLGYAPDEWDALLTVAEEEQIDR 175 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND----TPKYLNSP 234 ++L AG+++ + G YDR+R R++FPI G+V+ F GR+L D PKY+NSP Sbjct: 176 ETLEKAGLIIERNDGSGYYDRYRGRIIFPIFSHIGKVLAFAGRILDPDDERDQPKYINSP 235 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET+++HK LYGL++A+Q + + +L+VEGY DV++L+Q G+ VAS GT+ T I Sbjct: 236 ETEVYHKKEVLYGLHQAKQAIRKTDEVLLVEGYTDVISLSQAGVGNVVASSGTALTEQQI 295 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 L R + YD D AG AA R +E L G + LP G DPD V++ G Sbjct: 296 GTLDRYAKRAVMLYDADEAGERAALRGMERVLE---AGLGAYAVELPAGNDPDEYVQEHG 352 Query: 355 KEAFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 +AF + E L +F + L TP+ R + + ++++P LR Sbjct: 353 GDAFSDYVQEHRQDLPSFAYQRARRNGVLETPEDRVEVQREIIESVARIPDPNLRREYVA 412 Query: 414 ELGNKLGILDDSQLERL----------MPKAAESGVSRPVPQLKR--------------- 448 G+ D L + + R Q + Sbjct: 413 HTSEVTGVPDSDLFRMLEEEREQMERRAQRQRKREQKRQQRQAEEGASPSGEQAAPPDRN 472 Query: 449 ---------------------TTMRILIGLLVQN-PELATLVPPLENLDENKLPGLGLFR 486 R+L L+++N + +LV LDE F Sbjct: 473 GASPPPPNSTTGKTASGPALLPEERVLFRLMLENGRRMVSLVLGHMALDEFSEGAPRDFA 532 Query: 487 ELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT------FTD--- 537 + Q+L G + M + A ++ A++ D Sbjct: 533 RAFAEMYEDGTVRPQQILNGEHGEALQQLGASVMMDEHEASEHWAQKEDISVPHLNDRPY 592 Query: 538 -----SLNHMFDSLLELRQEELIARE--RTHGLSNEERLELWTLNQELA 579 ++ + ++ E + R + ++EE L L Sbjct: 593 EAARSAMKFLKMDRVDEAIEAVRERMYQASQQGADEEVQRLQQKMMSLQ 641 >UniRef50_B3PKA2 DNA primase n=6 Tax=Gammaproteobacteria RepID=B3PKA2_CELJU Length = 694 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 228/438 (52%), Positives = 310/438 (70%), Gaps = 2/438 (0%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP+ FI+DLL R DIVD++D+RVKLK+ GKN+ ACCPFH+EKTPSFTV+ EKQFY+ Sbjct: 1 MAGLIPQSFIDDLLDRVDIVDVVDSRVKLKRSGKNYSACCPFHDEKTPSFTVSPEKQFYY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGA GNA+ F+M+Y++L F E VE+LA + LEVP E S +++++Y L+ Sbjct: 61 CFGCGASGNALGFVMDYERLSFPEAVEQLARITGLEVPREVQSEAEAKREQEKKSIYSLL 120 Query: 121 DGLNTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + FYQ L+Q + A YL+ RGL + + +GFAPPGWDN+LK G + +++ Sbjct: 121 EKADDFYQHQLRQHPSKHLAVNYLKGRGLDGKTAKTYGVGFAPPGWDNLLKTLGQDDDDK 180 Query: 180 QSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 LI GML+ +Q + YDRFR R+MFPIRD RGRVIGFGGRVLG+D PKYLNSPET + Sbjct: 181 HLLIQGGMLIHQEQEKKLYDRFRHRIMFPIRDTRGRVIGFGGRVLGDDKPKYLNSPETPV 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHKG++LYGLYEA+ E RLLVVEGYMDVV+LAQ+GI Y VA+LGT+ DH+ F Sbjct: 241 FHKGQELYGLYEARLAYRELPRLLVVEGYMDVVSLAQFGIGYGVATLGTACGPDHLDRAF 300 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + T+ V+ C+DGD+AGR AA RAL+ AL M DGR ++F+FLP+GEDPDTLVR+ G + F Sbjct: 301 KYTSEVVFCFDGDKAGRSAALRALDAALETMADGRAVKFLFLPEGEDPDTLVRQIGPDKF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 E +E A+PL +LF+++ +++ T +GRA S A PL+ ++P R + + L + Sbjct: 361 EHMIELAVPLEDYLFDAVAEGLNIRTMEGRATFSKRAAPLLDRLPKGVFRELMFENLATR 420 Query: 419 LGILDDSQLERLMPKAAE 436 G+ E + + A+ Sbjct: 421 TGLNRRLLDELIADQKAK 438 Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 18/127 (14%) Query: 469 PPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT---NNAATLEKLSMWDDI 525 P + + L L L+ +P L+ ++RGT +N L ++ D + Sbjct: 548 PDHDAWLTEEDEDLQLLGRLLKVLHERPHYNLSHLIGYWRGTYGPDNTEKLAAVAGHDLL 607 Query: 526 ADKN---------------IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLE 570 AE F+ ++ + ++ + + +A+ +T + + E Sbjct: 608 QAATALTRPRQDKPAKADYDAEAGFSGAIQALRRQQIDKKSAQSLAKLKTADFTQLSKAE 667 Query: 571 LWTLNQE 577 L +E Sbjct: 668 REQLVRE 674 >UniRef50_A3I353 Putative DNA primase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I353_9SPHI Length = 645 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 171/633 (27%), Positives = 285/633 (45%), Gaps = 61/633 (9%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I ++ + R DI +++ V LKK+G+N ACCPFHNEK+PSF+V+ KQ Y CFGC Sbjct: 3 ISKLTTEKVKERVDIEEVVGDYVPLKKKGQNLWACCPFHNEKSPSFSVSPAKQIYKCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGL 123 G G+ I F+M+ + + F E + LA + +EV E + +R++LY + Sbjct: 63 GKAGDPIQFVMDVEGVGFTEAIRHLAGKYGIEVEEDEERTPEQDQAYSERESLYIALGFA 122 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L P S Y ++RG S+ +I +F +G+A GWD++LK + + L Sbjct: 123 RDFFVKNLLSPEGKSIGLSYFKERGFSNSIIEKFDLGYALDGWDHLLKAAKSSGFQEEIL 182 Query: 183 IDAGMLVTNDQG--RSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 + AG+++ + R YDRFR RV F I + G+ IGFG R+L + PKY+NSPET + Sbjct: 183 LKAGLILQKEGDPSRVYDRFRGRVTFAIHNIGGKPIGFGARILTKDKNQPKYINSPETAV 242 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 +HK LYG+Y+A++ + +VEGY DV+++ GI VAS GTS T I+L+ Sbjct: 243 YHKSDVLYGMYQAKKAIRAKDNCYLVEGYTDVISMHLSGIENVVASSGTSLTEGQIKLIK 302 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T+ V YDGD AG A+ R ++ L G ++ + P+GEDPD+ RK G +AF Sbjct: 303 RFTDQVTVLYDGDPAGIKASLRGIDLLLE---GGLNVKAVVFPEGEDPDSYSRKVGSQAF 359 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + E + F + P +A + + I ++P +R QE + Sbjct: 360 QDYLVENSRDFIGFKIGLYQDEF-AKNPIRKAEVIREVIQSIGKIPDPIVRSVYAQEASS 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLK------------------------RTTMRI 453 L + +D L ++ + + + + + Sbjct: 419 LLEVEEDVIHTELNKSLIKTQRDQFQKREEAPPHDLGFEEYLPTEEKSTASDSLKIQEKE 478 Query: 454 LIGLLVQNP---------ELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLL 504 +I LL+ L + + + P L+ T Sbjct: 479 MIRLLLNYGWEKIDHDELHLCDYLLAETADLKFETPVYEKILITYRQILNMGEAPTIDFF 538 Query: 505 EHYRGTNNAATLEKLSMWDDIADKNIAE--QTFTD------------SLNHMFDSLLELR 550 ++ + + + L + +E Q F + S+ + +++ Sbjct: 539 IRHQDSEMKSVVIDLITPRHEVSTHWSERHQIFINKENDNLSLTGFKSILRLKRRVVQKM 598 Query: 551 QEELIARERTHGLSNEE---RLELWTLNQELAK 580 EE + +T +E EL + EL K Sbjct: 599 MEEAKMKIKTAESEKDETADIEELQKIYFELKK 631 >UniRef50_C6QCP0 DNA primase n=2 Tax=Hyphomicrobiaceae RepID=C6QCP0_9RHIZ Length = 661 Score = 493 bits (1269), Expect = e-138, Method: Composition-based stats. Identities = 202/640 (31%), Positives = 302/640 (47%), Gaps = 66/640 (10%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++++ AR + ++ +V LKK G+ + PF EK+PSF VN +K FYHCF Sbjct: 2 RFNPNFLDEIRARLPVSQVVGRKVALKKAGREYRGLSPFKTEKSPSFFVNDQKGFYHCFA 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ FLM + LEF E VE LA + +P + + QR LY+L++ Sbjct: 62 SGEHGDIFTFLMKTEGLEFPEAVERLAQEAGVPMP--KQPERNVADEDQRDRLYRLLEAS 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+++SL+ + AR+Y+EKRGL HE + F +GFAP + G + + Sbjct: 120 AAFFEESLRSGLGAEARRYIEKRGLQHETVRAFRLGFAPNSRTALTAHLKGKGFSLADMA 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 AGML+ YDRFR RVMFPI D +GRVI FGGR L D P KYLNSPET +FHK Sbjct: 180 SAGMLIAGSDIPEPYDRFRNRVMFPILDLKGRVIAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ A+ + NR++VVEGYMDVVALA+ G +VA LGT+ T D ++LL+R Sbjct: 240 GHTLFNAARARSAAHDKNRVIVVEGYMDVVALAEGGFAESVAPLGTALTEDQVKLLWRFA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 C+DGD AGR AA RA+E ALP++ G L F FLPDG DPD L+R++G A Sbjct: 300 PEPTLCFDGDSAGRKAADRAVEVALPWLKPGHSLGFAFLPDGLDPDDLIRQQGAAAMSDA 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL-- 419 + +A PL L++ + TP+ RA L L+ + T+R + ++EL ++L Sbjct: 360 LSKARPLVDVLWDRELRAAPSDTPEQRAALEARLFALVGTIQDATVRSHYQRELRDRLYQ 419 Query: 420 --------------------GILDDSQLE-------------RLMPKAAESGVSRPVPQL 446 GI S RL P+L Sbjct: 420 LGRNRFPRPMAGLPTGRQGGGIAQASYARPVAAPDWKARDRARLNGPERRFTKKNNAPEL 479 Query: 447 KRTT-------------MRILIGLLVQNPELA-TLVPPLENLDENKLPGLGLFRELVNTC 492 + +++ L+ +P L + ++ + P L E++ Sbjct: 480 VNASPELAGHMQSVLPREALIMKTLLNHPWLIDEHSEAIAVIEFSSQPLTALRDEILAVH 539 Query: 493 LSQPGLTTGQLLEHYRGTNNAATLEKLSM-----WDDIADKNIAEQTFTDSLNHMFDSLL 547 Q L L + A ++ ++ D A+ + + + NH+ L Sbjct: 540 ARQNSLDRASLGTQLSKSGVAKVVDLVARTITHISDRFAEPDASATDVEAAWNHI--LAL 597 Query: 548 ELRQEELIARERTHGL------SNEERLELWTLNQELAKK 581 RQ+ L + + E L + +++A++ Sbjct: 598 HQRQDALGRALKAAEEAWYRDCTEEAETHLLDIKRQIARE 637 >UniRef50_A8IFR3 DNA primase n=12 Tax=Rhizobiales RepID=A8IFR3_AZOC5 Length = 643 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 200/602 (33%), Positives = 290/602 (48%), Gaps = 46/602 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R P F++++ R + +++ RVKLKKQG+ F PF+ EKTPSF VN +K FYHCF Sbjct: 2 RFPPSFLDEIRTRLPVSEVVGRRVKLKKQGREFAGLSPFNAEKTPSFFVNDQKGFYHCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G HG+ DFLM + L F E VE LA+M L +P + + + +R+TL+++M+ Sbjct: 62 SGKHGDVFDFLMETEGLPFGEAVERLASMAGLPLP--DVTPEAAAKEARRRTLHEVMEMA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F++ LQ AR YL RGL RF +G+AP + + G ++ Sbjct: 120 AAFFEAELQARAGAKARGYLSDRGLGPSTQKRFRLGYAPGDRFALKEALGKAGVPVSDMV 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 + G+L+ D YDRFR+RVMFPI D +GRV+ FGGR L D P KYLNSPET +FHK Sbjct: 180 ETGLLIAGDDIPVPYDRFRDRVMFPITDLKGRVVAFGGRALEKDVPAKYLNSPETPLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY Y A+ + ++ VEGY+DV+AL + G AVA LGT+ T + +QLL+R Sbjct: 240 GSLLYNAYSARAAVQKGAPVIAVEGYVDVIALVEAGFEGAVAPLGTALTEEQLQLLWRMA 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + + +DGD+AGR AA+RA+ ALP++ G+ L F LPDG+DPD L+R G+EA E Sbjct: 300 DEPVLLFDGDKAGRRAAFRAVGLALPHIKPGKSLSFGALPDGQDPDDLIRASGREAMEGV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL-- 419 + QA PLSA L+ +L TP+ RA L ++ + E +R + +Q+L ++L Sbjct: 360 LAQAQPLSAMLWARETEGSNLETPERRAALEARIGEAVAAIQDENVRRHYKQDLQDRLRR 419 Query: 420 ---------------GILDDSQLERLMPKA----------------AESGVSRPVPQLKR 448 G A S V R Sbjct: 420 LLSPGSENRPRRFEGGWSAAPGRSGNFRPQNGRFMREPPLVPGTELARSAVVRGPLASLP 479 Query: 449 TTMRILIGLLVQNPELA-TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY 507 +L+ L+ +P L + L L R L+ L L EH Sbjct: 480 RNEALLLFCLINHPWLMDEYAEEVAGLPFANKDADRLRRALLEAHLEGAH-EGEALTEHL 538 Query: 508 RGTNNAATLEKLS-----MWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG 562 + A +++ D A + A + L + + L + L R Sbjct: 539 TREDLDALAQRVRAFANPKMDWPAYPDTAPEDAR--LWWLQRAALHQKAYALSKELREAE 596 Query: 563 LS 564 S Sbjct: 597 RS 598 >UniRef50_B8FTY2 DNA primase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTY2_DESHD Length = 614 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 189/612 (30%), Positives = 284/612 (46%), Gaps = 41/612 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M RIP + ++ R+DIVD I V+L+++GKN+ CPFH EKTPSFTV +KQ ++ Sbjct: 1 MDYRIPEEIVEEVRLRSDIVDTISEYVRLQRKGKNYLGLCPFHAEKTPSFTVTPDKQIFY 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC GN FLM + FVETVE LA H + +P + S + ++ +R+ ++ Sbjct: 61 CFGCHTGGNVFSFLMKKENWNFVETVEHLAQKHGIVLPEKELSPREKEQQTRRRRWEEIH 120 Query: 121 DGLNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 D ++ + L +P RQY ++RG+ E I +F +G+AP WD +L+ + Sbjct: 121 DWATGYFHEVLLHRPEGEPGRQYFQQRGMDEETIKQFRLGYAPDRWDGLLEALSARGVSP 180 Query: 180 QSLIDAGMLVTNDQG-----RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSP 234 Q L AG+ + DQ YDRFR+RV+F I D R + IGFGGRVL + TPKYLNSP Sbjct: 181 QELAQAGLALERDQSEGRSRGFYDRFRKRVIFAILDSRHKTIGFGGRVLDHSTPKYLNSP 240 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET F+KG LYG++ A Q E L+ EGYMDV+AL + G AVASLGT+ T D Sbjct: 241 ETAFFNKGHHLYGMHRAHQGIREHGFALLAEGYMDVIALQKAGFKNAVASLGTALTRDQA 300 Query: 295 QLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 +L+ R T V+ YD D+AG A RA E G ++ + L +DPD ++ G Sbjct: 301 KLIHRYTGRVVVVYDSDQAGTQATLRAGELLQDM---GFRVDILRLSGAKDPDEYLKTFG 357 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 E F + QA P F + + + +A L P I +V R + Sbjct: 358 VEEFNKALAQAEPYIQFKYQVHVQTKPTLSAPEKAELVRELAPDIVKVQSPVEREGYERF 417 Query: 415 LGNKLGILDDSQLERL-------MPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELAT- 466 L +LG+ D E + KA+ + R + + P A+ Sbjct: 418 LSLELGLTLDRVQEEIAGFDRKPSKKASGEELFRNKQDISVKNRDNINRCANPTPSGASV 477 Query: 467 ---------------LVPPLENLDENKLPGLGLF-----RELVNTCLSQPGLTTGQLLEH 506 L + + G + +++ + + G L Sbjct: 478 PDGVIRAERVLLRLLLEQLIPVSEFKDQWVEGFWKVAYHQQIFDYIEKARCIGNGALSGM 537 Query: 507 YRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 G + + + ++A+ ++ F D + + E EEL AR S + Sbjct: 538 ESGPLQSKVAQIMLEDMELANP---QRLFHDCMKQIHSMSEEETVEELQARMVELEKSGD 594 Query: 567 ERLELWTLNQEL 578 L L +E+ Sbjct: 595 LTGAL-ALLKEI 605 >UniRef50_A0NW37 DNA primase n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW37_9RHOB Length = 648 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 182/621 (29%), Positives = 286/621 (46%), Gaps = 46/621 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++++ AR + D++ RV ++ GK ++ ACCPFH EK+PSF V+ + Sbjct: 2 RFEPRLLDEIRARLTLSDVVGRRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNR 61 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCGA G+ FL + L F E VE LA + +P A + +R L Sbjct: 62 YKCFGCGASGDHFTFLCETEGLSFPEAVERLAEQAGVGLP--APDPQAARREKKRAGLAD 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + F+Q P +AR Y +KRGL+ E + F GFAP D + Sbjct: 120 ICEMAAQFFQAEFAGPRGDAARAYTQKRGLAQETLREFRFGFAPDSRDALKGYLAAREIP 179 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPET 236 ++I+AG+++ + GR YDRFR R+M PI D RGRV+ FGGR L + PKYLNSPET Sbjct: 180 EAAMIEAGLIIKPEDGRPSYDRFRGRLMIPIHDDRGRVVAFGGRTLSPDGQPKYLNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A++ + +VVEGY+D +AL Q GI++ VASLGT+ T D + Sbjct: 240 PLFHKGVMLFNAHRAREPAFKSGEAVVVEGYLDAIALWQAGIHHVVASLGTAFTEDQVVR 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L++ + C+DGD AG AA RA++ P + G +F FLPDG DPD L+++ G Sbjct: 300 LWKFAPEPVICFDGDAAGVSAAHRAIDRIFPVLKSGYSFQFCFLPDGMDPDDLIKQRGVT 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F +E+A L +++ + L TP+ +A L LI + E +R + +L Sbjct: 360 GFHDEVERAQSLFEVVWDREISVSRLDTPERKAALEKRFDDLIGTIRDERVRRRYQLDLK 419 Query: 417 NKLGILDDSQLERLMPKAAES--------------GVSRPVPQLKRTTMRILIGLLVQNP 462 KL L Q + R T R+++GL ++ P Sbjct: 420 FKLSNLFFEQARQSRQGGKGGRSGGAAEAGVPLGMARERVSATHDFGTERLVLGLSMRFP 479 Query: 463 EL----ATLVPPLENLDENKLPGLGLFRELVNTCLSQP-------------GLTTGQLLE 505 L L ++ + +V+ + P + +LE Sbjct: 480 YLLDRNFERFSRLPFANDLHRELRDILCRIVDDLEATPIAELTSAFEEPLRDIMGEMMLE 539 Query: 506 HY-----RGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT 560 RG +A + + ++ E + L+ + + LE +A Sbjct: 540 TIGMQQQRGAEFSALTHRFPLLKSNPPEDFIEAAYLHFLDVLELNALEDELSSELATADE 599 Query: 561 HGLSNEERLELWTLNQELAKK 581 L + + L Q+L+++ Sbjct: 600 Q-LDEHSWMRIQALTQDLSRR 619 >UniRef50_A0L5T2 DNA primase n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L5T2_MAGSM Length = 639 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 215/641 (33%), Positives = 317/641 (49%), Gaps = 62/641 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA P F++ L R DIVD+I+ ++ LKKQG+N+ CPFH+EK+PSF+VN EK FY Sbjct: 1 MA-YFPDTFLDQLKERVDIVDVIERQLPLKKQGRNWIGLCPFHHEKSPSFSVNQEKGFYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQL 119 CFGCGA G+AI F+ + F E + ELAA L +P E P+Q + + +R L L Sbjct: 60 CFGCGASGDAIKFVQQTRGIPFEEAIRELAAQAGLPLPQEQRQNPAQAQAKEKRDRLRAL 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ F+Q L+ P AR YL++RGL+ E I+ + +GFAP GW N+L FGG Sbjct: 120 LEESKRFFQGQLRAPNGGLARAYLQRRGLTAETISSYELGFAPAGWRNLLDFFGGGDSAI 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + +++AG+LV + G YDRFR R++FPI D RGR I FGGRVL ++ PKY+NSPET ++ Sbjct: 180 ELMLEAGLLVKKEDGSVYDRFRNRIIFPILDSRGRCIAFGGRVLTDEKPKYINSPETPLY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K LY L AQ+ + LVVEGYMD V LA++ + VA+LGT+ T H++LL++ Sbjct: 240 NKSEVLYALNRAQERWSRGEMALVVEGYMDAVMLAEHHLTGTVATLGTAVTEQHLKLLWQ 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TN +I C+DGD AGR AAWRALE L + R ++F+FLP+GEDPD+LV+KEG + F+ Sbjct: 300 RTNRIIFCFDGDAAGRRAAWRALERGLQGLQADRHMQFLFLPEGEDPDSLVQKEGVQRFK 359 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 R A + + Q+DL TP+GRA PLI+ V LR +LG+KL Sbjct: 360 ERANGAYSPMQLMHKVMGEQLDLYTPEGRAAAVHRMRPLITSVADPVLRQLYADDLGHKL 419 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLK-------------------------------- 447 G + +QL A + + P Sbjct: 420 GGVSGAQLLYGGESPAPATPAWPGSTPYGEGHAPRFPVRSGGSRRAEWRNTIKNRGGWQP 479 Query: 448 ---------------------RTTMRILIGLLVQNPE-LATLVPPLENLDENKLPGLGLF 485 R + L+ L+ +P L L + L Sbjct: 480 AQKPSWEQEVSSLLLGGEVRGRDFEQALLAQLLNDPRLLLEHQETLSTIQLKNTQLNQLL 539 Query: 486 RELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDS 545 EL+ L ++ + +A ++ ++ + + + Sbjct: 540 TELLEVGPDLQHLDQPFSIDQLKDGQSAQLARRIL-LEEQTPLDDPARELEGCMKTDQLR 598 Query: 546 LLELRQEELIARERTHG-----LSNEERLELWTLNQELAKK 581 L+ + AR R + ++L L ++ Sbjct: 599 QLQQEMVAVNARIRQGNAETFKKDFDHLMQLKKDMDRLKQR 639 >UniRef50_C6BSW9 DNA primase n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BSW9_DESAD Length = 579 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 156/588 (26%), Positives = 258/588 (43%), Gaps = 32/588 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + R I + R DIVD++ V+LK + CPFHNEKT SF+VNGE+ F++CFGC Sbjct: 1 MDRAAIEAIKERLDIVDIVRRYVELKPVSGRWMGLCPFHNEKTASFSVNGEEGFFYCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ DF + + +EF + +E+LAA +E+ + +R+ + + Sbjct: 61 QASGDIFDFYSHINGVEFKDALEQLAAEAGVELTPGKVDPQAAKRSSERKIFMDMHEHAA 120 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ + L+ P AR+Y+E RG+ VI F +G + W + K + + Sbjct: 121 KYFSRMLKLPEGREARKYIEGRGMDTSVIESFGLGCSTDDWQGLEKYLVSKGYTAEQGVK 180 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N +GR+YDRFR R++FPI + GRVI FGGR++ N PKYLNS +T I+ KG Sbjct: 181 AGLLSQNAKGRTYDRFRARLIFPITNLSGRVIAFGGRIITNGEPKYLNSSDTPIYKKGEH 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ A R L+ EGYMDV++L Q+G + LGT+ T D ++ L + + Sbjct: 241 LYGLSTARNSIARTKRALLTEGYMDVISLHQFGYTNSCGVLGTALTPDQVKRLSGFCSKI 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 +DGD AG AA R+ E L T G + LPDGED D++++ G E F+ +++ Sbjct: 301 DLVFDGDAAGLKAALRSTEMIL---TQGVSCGVVVLPDGEDVDSILQSRGAEGFQVFLDK 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F +L + A + ++ +LR + ++ + LG+ + Sbjct: 358 ARDGLEFSLETLQKGYSPR------EVMDWAQGFLKRMTSASLRAFYLPKVASGLGVAEA 411 Query: 425 SQLERLMPKAAESGVSRPVPQLKRTTM------------RILIGLLVQNPELATLVPPLE 472 + + + + V++PE + Sbjct: 412 ELRSVFSGALNAPVPQQQNTVQRDQPRAATPVGAQVKDDKYFLRYAVKHPEYVVELSERG 471 Query: 473 NLD-ENKLPGLGLFRELVNTCLSQ--PGLTTGQ--------LLEHYRGTNNAATLEKLSM 521 G L+ ++ P L + + E G + + Sbjct: 472 VAQVLTSHWGKTLWSKIAAHSGQDIIPLLDDSEKRFYAGCRMEEALSGEDLEDEWRHVCR 531 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 ++ + TD+L R + ++E+ Sbjct: 532 VIARRRYDMGRKKLTDALRRAQAQGDTERVNAYLKVLNDSVWRDDEQH 579 >UniRef50_C7LRM9 DNA primase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LRM9_DESBD Length = 567 Score = 491 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 169/581 (29%), Positives = 260/581 (44%), Gaps = 24/581 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + I + AR I D+I V+L+ G A CPFH E PSF+VN E FY+CFGC Sbjct: 4 FDQGLIAQIKARLRIEDVIGRHVELRPAGNRLVAPCPFHQETKPSFSVNPEGGFYYCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ I+F + LEFVE VE LA LEV R + Sbjct: 64 QASGDIIEFYRAINGLEFVEAVEALAREAGLEVRRRPEY--MAPGEISRSQCLDMHALAA 121 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY++ L + +AR Y+ +RGL+ E++ RF +G+AP GW+ + G Sbjct: 122 VFYREVLGRAPGQAARDYIARRGLASEIVERFCLGWAPAGWNELRDHLRGRGFPEAVAEK 181 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGR 243 AG++ + +G YDRFRER++FPI + + + FGGR L D PKYLNS ET I+ KG Sbjct: 182 AGLVSKSAKGSYYDRFRERLIFPIMNLSAQTVAFGGRSLVDGDGPKYLNSSETPIYTKGE 241 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGLY+A++ + +L+ EGY+DV++L Q+G + LGT+ T + + L Sbjct: 242 HLYGLYQARRAMSHSKSVLLTEGYVDVLSLHQFGFENSCGVLGTALTPEQVHRLSGLVGQ 301 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V +DGD AGR AA R+ E L T G + R + +P+GED D++++K G+E+ Sbjct: 302 VDLVFDGDNAGRKAALRSAEMIL---TQGLKCRVLLMPEGEDVDSVLQKNGRESLLELSA 358 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 QA+ + L + A +S++ + Y +L LG+ + Sbjct: 359 QAVDGLDYCLRQLSANQSPKD------VLNWATGFMSRLKKLDWKSYYLPKLAAGLGLSE 412 Query: 424 DSQLERLMPKAAESGVSRPV--PQLKRTT-MRILIGLLVQNPELATLVPPL-ENLDENKL 479 L K A++ S P Q K + + L+ V+ PE + L Sbjct: 413 TELRRTLGEKGADATASAPARLEQCKPSQLDKNLLAFAVRFPEYHGQLHELGLGEALATE 472 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE-QTFTDS 538 G + ++ G++ ++L ++ D D +E D Sbjct: 473 RGRIFWSKIF-------GVSPHEVLSRMDQGEKQFYVQCQMRTDVTVDDGRSEWDEVQDF 525 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 L + + R G EE L + + Sbjct: 526 LRQTGQRRDLESLNSGLRKARQSGDFQEELRLLALIQAKTQ 566 >UniRef50_A7VZA5 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZA5_9CLOT Length = 597 Score = 490 bits (1262), Expect = e-137, Method: Composition-based stats. Identities = 155/602 (25%), Positives = 268/602 (44%), Gaps = 47/602 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+P F+ +L R +I+D++ V LK+ G+ CPFH EKTPSF VN E+ ++HCFG Sbjct: 9 RLPDSFLQELKDRNNILDVVSGYVNLKRSGRTMSGLCPFHGEKTPSFHVNAEQGYFHCFG 68 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I F+ + L++++ V+ LA +E+P + G + H R +Y+ Sbjct: 69 CGAGGDVITFIRKIENLDYIDAVKFLAQRAGMELPED---GRDEAAAHIRGRIYEANREA 125 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ + L +A YL RGL+ I F +G++P ++++ + +I Sbjct: 126 ARFFHRCLYSEEGKNALAYLRGRGLTERTIKHFGLGYSPNSRYALVRQLRSLGFRDEEII 185 Query: 184 DAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 A + G DRF +RVMFPI D RG VIGFGGR++ + PKYLN+ +T +F+K Sbjct: 186 RANLGFQGRYGSKGALDRFADRVMFPIIDLRGNVIGFGGRIMTDQKPKYLNTSDTMVFNK 245 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 + LY L A+ RL++ EGYMDV+AL Q G AVA+LGTS T + +L+ R Sbjct: 246 SQNLYALNFAKNA--GEKRLILAEGYMDVIALHQAGFPTAVATLGTSLTTEQARLIARYA 303 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE---GKEAF 358 + CYD D AG+ A RA+ G +R + + G+DPD +R G F Sbjct: 304 QEAVICYDSDGAGQKATARAIPML---REAGLLVRVLTVTGGKDPDEFIRSHGDQGPARF 360 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + +E + + +DLS PDG+ T + +++ + + + + + Sbjct: 361 KQLLEASGNDVEYRLQKAANGLDLSQPDGKIAYLTACVSILATLDSKIEQEVYAGRIAAE 420 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKR-----------------------TTMRILI 455 + I S + ++ + + + V + + L Sbjct: 421 VEIEKSSVMAQVEKQMRKRRRDQSVQEFREIQKATSGFGDAVNPQKSQNLRAANAEEALT 480 Query: 456 GLLVQNPELATLVPPLENLDEN-KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 ++ NP++A + D+ ++ + ++ L + + + Sbjct: 481 AYVINNPDMANNIEKWIRPDDFVTDFNRRVYETVTGRIRENRPVSPTDLTQDFSEQEMSR 540 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 L ++L D ++QE+ A+ R +E + + Sbjct: 541 IAGMLYKASVGG----------ETLEAAKDYCKIIKQEKSSAKLREPLEDDEAKRLFEEI 590 Query: 575 NQ 576 + Sbjct: 591 QK 592 >UniRef50_A5D3U5 DNA primase n=2 Tax=Peptococcaceae RepID=A5D3U5_PELTS Length = 630 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 184/591 (31%), Positives = 275/591 (46%), Gaps = 28/591 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP I + +DIV+++ V L+K+GK F CPFH++++PSFTV +KQ +HCF Sbjct: 2 GFIPDDIIETVRLNSDIVEVVSRYVSLRKKGKYFTGSCPFHSDRSPSFTVTPDKQIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC A G+ FLM + L F E V LA + +P + +R ++ L ++ D Sbjct: 62 GCNAGGDVFKFLMLKENLTFYEAVSMLARRAGIALPAREDPAGPERDR-KKALLQRINDL 120 Query: 123 LNTFYQQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 F+ ++L+ A AR+YL +RGLS EV+ RF IGFA PGW +L Sbjct: 121 AKDFFYENLRRHEAAAEARRYLAERGLSGEVLDRFQIGFALPGWSALLDFLSRKGCQPHD 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +AG+ V D GR YDRFR R++FPI D GRV+GFGGRVL PKYLN+PET F K Sbjct: 181 AAEAGLAVKGDSGRYYDRFRNRIIFPIWDPVGRVVGFGGRVLDGSLPKYLNTPETPFFSK 240 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LYGL+ A+ E + +VVEGYMD V +G VASLGT+ TA+ +LL + Sbjct: 241 GRILYGLHLARPAIRERDCAVVVEGYMDAVTAHLHGAANTVASLGTALTAEQGRLLINYS 300 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 NV+ YD D AG AA R ++ G Q+R +PDG+DPD +R++G +++E Sbjct: 301 RNVVIAYDADAAGVAAAMRGMDLLQEL---GFQVRVATIPDGKDPDEYIRRQGIQSWEKL 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +A L + M + + T G+ + P ++ + E + + + L + Sbjct: 358 IGEAPSLIEYKLQKAMEKGPVRTVTGKLEVMRQVFPNLA-LKNEVEKEEGLKAIAGALNL 416 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRTTMRI-----------------LIGLLVQNPEL 464 ++ A G P T L+ L++++P L Sbjct: 417 TWETVAGEFKRFEANLGKKWANPDNIVKTKHNILSKEEKLDHRGKLEIGLLRLVLEDPSL 476 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDD 524 T V + + P EL +P ++ L L D Sbjct: 477 GTHVVEEMGPEPFRNPQYQKIFELCRNAAGRPVFRPAEIFSSLEDDE-KNVLSFLLTQD- 534 Query: 525 IADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER--LELWT 573 Q + ++ + R+E L+ + ELW Sbjct: 535 -IPGENLVQIMKNHIDSIRRFERRERREALLKEIAKAEKAGNHSLCNELWR 584 >UniRef50_O52200 DNA primase n=45 Tax=Actinomycetales RepID=PRIM_MYCS2 Length = 636 Score = 489 bits (1260), Expect = e-137, Method: Composition-based stats. Identities = 165/597 (27%), Positives = 263/597 (44%), Gaps = 43/597 (7%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHC 61 GRIP I + + I D++ V+L++ G + CPFH+EKTPSF V +HC Sbjct: 6 GRIPDRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFHC 65 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE-AGSGPSQIERHQRQTLYQLM 120 FGCG G+ F+ + + FVE VE LA V + + + Q +R R L Sbjct: 66 FGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVTYTGSSTTNVQRDRGSRSRLLAAN 125 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FY ++LQ A ARQYL +R A+F G+AP GWD + K + Sbjct: 126 AAAAEFYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEFK 185 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL---GNDTPKYLNSPETD 237 L AG+ +G DRF R+++PIR G IGFG R L + KY+N+PET Sbjct: 186 ELEAAGLSREGKRGPM-DRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPETV 244 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + L+GL A++D A+ ++ +VVEGY DV+A+ G+ AVAS GT+ H+ +L Sbjct: 245 LYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSML 304 Query: 298 FR-------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 R +I +DGD AGR AA +A E DG DP L Sbjct: 305 RRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLSGQSF---VAVAADGMDPCDLR 361 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + G A + + PL F+ S + + DL + +GR +P+++++ TLR Sbjct: 362 LRSGDGALRDLVARRTPLFEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRDE 421 Query: 411 LRQELGNKLGILDDSQL------------ERLMPKAAESGVSRPVPQLKRT--------- 449 ++L +G + +Q+ + + + +RP P + Sbjct: 422 YARQLAGWVGWDNVAQVIGRVREEAKGGGRKDNNRRGQETAARPKPPPVQRPDPTDPTLW 481 Query: 450 TMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC-LSQPGLTTGQLLEHYR 508 R + +Q P LA V ++ PG G R + + G+T Q +E R Sbjct: 482 PQREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWIETVR 541 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQT-----FTDSLNHMFDSLLELRQEELIARERT 560 + L + N+ + + L + + + + E+ ++ + Sbjct: 542 EQTTSPAAANLVNELSVETINVEDDEKLPRYISSVLARLQEVWVGRQIAEVKSKLQR 598 >UniRef50_B6QZN8 DNA primase n=1 Tax=Pseudovibrio sp. JE062 RepID=B6QZN8_9RHOB Length = 652 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 192/626 (30%), Positives = 291/626 (46%), Gaps = 50/626 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++F++D+ R + D++ RV ++ GK ++ ACCPFH+EK+PSF V+ + Sbjct: 2 RFDQLFLDDIRNRVSLTDVVGRRVTWDRRKSQPGKGDYWACCPFHSEKSPSFHVDERRNR 61 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCG G+ FLM + L F E VEELA + + +P A + +R TL Sbjct: 62 YKCFGCGESGDHFKFLMETEGLSFPEAVEELAGLAGIAMP--APDPQAAKRAAKRNTLTD 119 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + +Y+ Q +A++Y+++RGLS E + F GFAPPG DN+ K + Sbjct: 120 VCEMAARYYRHMFQSVEGRAAQEYVQRRGLSAETLNEFQFGFAPPGRDNLKKALMAKDIS 179 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPET 236 LI+ G+L+ D GR YDRFR R+M PI D RGR + FGGR + + PKYLNSPET Sbjct: 180 EAELIEVGLLIKPDDGRPSYDRFRNRLMIPIHDDRGRAVAFGGRTMDPDGQPKYLNSPET 239 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A+Q E + +VVEGYMD +AL Q G+ VASLGT+ T D I Sbjct: 240 PLFHKGTMLFNAHRARQPAYEAGQAIVVEGYMDAIALWQAGMKGTVASLGTAFTEDQIMR 299 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L++ + + C+DGD AG AA RA++ LP +T G+ +F FLPDG+DPD ++ G Sbjct: 300 LWKFADEPVICFDGDVAGISAAHRAVDRILPVLTSGKSFQFAFLPDGQDPDDVINAGGTS 359 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 A +E+A+PLS ++ + TP+ +A L L+ + E ++ R +L Sbjct: 360 AMYGELEKALPLSEVVWQRESEHARIDTPERKAALEKAVEDLVGTIKDERVQKRYRMDLR 419 Query: 417 NKLGIL--DDSQLERLMPKAAESGVSRPVPQLKRTT--------------MRILIGLLVQ 460 KL L ++S+ R + G P R + R + + Sbjct: 420 LKLSNLFYEESRRNRGQGGGRDGGWRGPQGGNDRASLAKVEAPDTPAYGVERSFCTMCLM 479 Query: 461 NPELAT-LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 PEL + L + LV Q+ E + Sbjct: 480 YPELFERHFERISQLTYSNELHSMFMAALVRIATDLAEGAVTQIYNKLDERFYQILQEAI 539 Query: 520 SMWDDIADKNIA-----EQTFTDSLNHMFDSLLELRQEEL-------------------I 555 D + + T+ L + + E E L Sbjct: 540 VSSSGEEDGSKSSTLRRWDALTNRLQILKNDPPEDFVEMLFLNYADMLELRMLELELEHE 599 Query: 556 ARERTHGLSNEERLELWTLNQELAKK 581 R L+ E L Q+L+++ Sbjct: 600 TRAMEQDLTEESWSRFQALQQDLSRR 625 >UniRef50_Q18BX2 DNA primase n=10 Tax=Clostridium RepID=Q18BX2_CLOD6 Length = 608 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 158/579 (27%), Positives = 279/579 (48%), Gaps = 25/579 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + I ++ AR DI +I + +K+ G N+ CPFH EKTPSF +N KQ Y CFGCG Sbjct: 17 KDIIEEIKARCDIASIISEYMNIKQSGANYKGLCPFHGEKTPSFYINTSKQIYKCFGCGE 76 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ I+F+M + L+F++ V+ LA +E+ + ++I+ + + + F Sbjct: 77 GGDVINFVMKMENLDFMDAVKILANKCGIEIN-TNMNEETRIKIEKSKKFQDIHTEAARF 135 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y +L +YL RGL ++I +F +GF+ W++++ +Q L++ G Sbjct: 136 YLSNLLGSKN-LGYEYLRIRGLDDKIIKKFGLGFSLDSWNSLMNTLISKGYKKQDLLECG 194 Query: 187 MLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 ++ N G YD+FR RVMFPI D RG +IGFGGRVL + PKYLNSP+T IF+K + L Sbjct: 195 LIAKNRDGTNCYDKFRNRVMFPIFDYRGNIIGFGGRVLDDSLPKYLNSPDTLIFNKKQNL 254 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 YGL A+++ E +++VEGYMD+++L QYGI VA+LGT+ T L+ R + I Sbjct: 255 YGLNFARKNL-ESKTIVLVEGYMDLISLYQYGIKNVVATLGTALTEQQGILIKRYADTAI 313 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG A RA++ G ++ + L D +DPD VRK G ++ M+ + Sbjct: 314 ISYDSDEAGIKATLRAIDILTKL---GINVKVLDLKDAKDPDEFVRKYGLSDYKKAMDVS 370 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 + + L + ++ + R + + A +I Q+ + + L N++ I +S Sbjct: 371 THYIKYKIDHLKKEFNIQKDEERVKFAKEASKIIKQLTSPVEIDFYTKYLSNQIDINVES 430 Query: 426 QLERL-------------MPKAAESGVSR--PVPQLKRTTMRILIGLLVQNPELATLVPP 470 + K E + + K+ LI +++++ ++ + Sbjct: 431 IKREVYGKNYNKPYNNKNQKKIEEKVIEKVEVRQDGKQLVEETLIKIMLEDKKIREIALL 490 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 + L E++N + L + + + L++L+ + Sbjct: 491 KVEESDFLLKESK---EILNYMIKNQELDKITIDKLKSLNISEEYLKELNSISLNSINLE 547 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 + + ++ + LE + L+ ++ +N+ + Sbjct: 548 NTKEIEGIITNIRKNSLEEQINSLLREQQELENNNDMKE 586 >UniRef50_C0W0B7 Possible DNA primase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W0B7_9ACTO Length = 663 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 173/518 (33%), Positives = 248/518 (47%), Gaps = 30/518 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M+G I + I + D+ +++ V L+ G N F CPFH+E TPSF VN + F+ Sbjct: 1 MSGLIIKADIEKVKDTVDLEEIVSNYVTLRPAGINTFKGLCPFHDENTPSFNVNTARGFW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+AI FL D L F + VE LA + + + +E G P+Q + +RQ L + Sbjct: 61 HCFGCGEGGDAISFLQKIDHLSFTDAVEHLAGKYGITLRYEEGKAPTQ-DYGKRQRLLDM 119 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +YQ L P A RQ+L +RG S E F +GFAP GW+ + Sbjct: 120 HRVAEEYYQAQLHSPEALPGRQFLSERGFSAEAAKHFGVGFAPSGWNGLSNVLRAQGFTD 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 Q LI G+ +G YDRFR R+M+PIRD G IGFG R L ++ PKYLN+PET Sbjct: 180 QELITGGLASQGSRG-VYDRFRGRLMWPIRDLTGATIGFGARRLLPDDNGPKYLNTPETP 238 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK + LYGL A++ A ++++VEGY DV+A GI+ AVAS GT+ ++H++++ Sbjct: 239 IYHKSKVLYGLDLAKRSIAAKRQVVIVEGYTDVMAAHLAGIDTAVASCGTAFGSEHVKIV 298 Query: 298 FRA-------------------TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFM 338 R VI +DGD AG+ AA +A + Q Sbjct: 299 RRLLGDIADPSMGLQLASGESRGGEVIFTFDGDAAGQKAALKAYGEDQNFA---LQTFVA 355 Query: 339 FLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPL 398 G DP L EG EA + +PL F+ + + VDLSTP+GR A P+ Sbjct: 356 IEKRGMDPCDLRIHEGDEAIRKLVAARIPLFEFVLRTTLTAVDLSTPEGRVAGLRAAAPV 415 Query: 399 ISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLL 458 +S + L+ + L LG+ + A + + PQ + Sbjct: 416 VSSIRDRALQKEYVRLLSGWLGMEARDVASEVARAAKMAAYAETQPQAQVKPQSETAK-- 473 Query: 459 VQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP 496 V +P A PL D P L + + + L P Sbjct: 474 VTSPTEAESEAPLAYGDMRS-PRFKLESQALASVLQCP 510 >UniRef50_A7BE18 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BE18_9ACTO Length = 656 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 156/536 (29%), Positives = 248/536 (46%), Gaps = 52/536 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I + I + I ++I V L+ G + CPFH+E+TPSF V + Sbjct: 1 MAGLIRKDDIEAVRNAVKIDEIIGEHVALRPAGIGSLKGLCPFHDERTPSFNVRPHLGMF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERH-QRQTLYQ 118 HCFGCG G+ I F+ D L F E VE LAA + + +E G + E +RQ L Sbjct: 61 HCFGCGESGDVISFVQKIDHLPFTEAVEMLAAKAGITLHYEEGGARVRTEEPGKRQRLLD 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 FYQQ L P A R +L +RG + + A F +G+AP WD++ + Sbjct: 121 AHRVAEEFYQQQLASPEAHKGRTFLAERGFTQVMCAHFGVGYAPASWDSLTRHLRSKGFT 180 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN---DTPKYLNSPE 235 Q + +G+ +G YDRFR R+++PIRD G +GFG R L + ++PKYLN+PE Sbjct: 181 DQEIQISGLGSQGSRG-VYDRFRGRLVWPIRDITGATVGFGARRLDDSDKESPKYLNTPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T I+ K + LYGL A++ A +++++VEGY DV+A G+ AVA+ GT+ ++H++ Sbjct: 240 TPIYKKSQLLYGLDLAKKTIATEHKVVIVEGYTDVMAAHVAGVTNAVATCGTAFGSEHVK 299 Query: 296 LLFR-------------------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLR 336 ++ R + VI +DGD AG+ AA RA + Q Sbjct: 300 IIRRLLGDHADPAAGVLLSTGRAHGSEVIFTFDGDSAGQKAALRAYGEDQNFAA---QTF 356 Query: 337 FMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLAL 396 P G+DP L +G +A + +PL F S++ Q+DL + +GR + + Sbjct: 357 VAVAPGGQDPCDLRLSQGDQAIVDLVNSRIPLFEFAIRSVLSQMDLRSAEGRVQGLRASA 416 Query: 397 PLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAA--------------ESGVSRP 442 +++ + LR ++L LG+ + + + +G RP Sbjct: 417 GIVAHIKDRALRAEYTRQLAGWLGMDIPTVEQAIRAAGRVEVLSHEARPGEIEMAGAGRP 476 Query: 443 VPQLKR--------TTMRILIGLLVQNPELA--TLVPPLENLDENKLPGLGLFREL 488 VP +R R + ++Q+P A + L+ + + Sbjct: 477 VPASERRGPEDPVSRIERQALEAVLQHPLYAVGSGFEELDGQSFTVPTHRAVHDAI 532 >UniRef50_A9BMX8 DNA primase n=10 Tax=Comamonadaceae RepID=A9BMX8_DELAS Length = 677 Score = 489 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 198/453 (43%), Positives = 285/453 (62%), Gaps = 16/453 (3%) Query: 1 MAGR-------IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVN 53 MA R IP+ FI +LL+R D+VD++ V+L+K G NF CPFH+EK+PSFTV+ Sbjct: 1 MAPRRHNTRVSIPQSFIQELLSRVDVVDIVGRYVQLRKGGANFMGLCPFHSEKSPSFTVS 60 Query: 54 GEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQI----E 109 KQFYHCFGCG +GNAI FLM++ + FVE V++LA+ L+VP + S + + Sbjct: 61 PSKQFYHCFGCGKNGNAIGFLMDHAGMGFVEAVQDLASQVGLQVPQDDISPAERERQAAQ 120 Query: 110 RHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL 169 + ++ TL +++ Y++ L+ + A YL++RG+S E RF +G+AP GW ++ Sbjct: 121 KQKQATLTDVLEKAGDAYRKHLK--ASPQAIDYLKRRGVSGETAKRFGLGYAPAGWRSLA 178 Query: 170 KRFGGNPENRQSLIDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP 228 F + L ++G+++ + + YDRFR+R+MFPIR+ +G IGFGGRV G++ P Sbjct: 179 SVFPQ--YDDPQLEESGLVIVGEGDDKRYDRFRDRLMFPIRNVKGECIGFGGRVFGDEKP 236 Query: 229 KYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTS 288 KYLNSPET +FHKGR+LYGL+EA+ + LV EGYMDVVALAQ G AVA+LGT+ Sbjct: 237 KYLNSPETPVFHKGRELYGLFEARTALRDMGYALVTEGYMDVVALAQLGFANAVATLGTA 296 Query: 289 TTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDT 348 T DHI LFR T V+ +DGD AGR AA +AL+ ALPY +D R ++F+FLP DPD+ Sbjct: 297 CTPDHIHKLFRFTEAVVFSFDGDAAGRRAARKALDAALPYASDTRSVKFLFLPAEHDPDS 356 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 +R+ G EAF + A+PLS FL + DL +GRA +++ A PL + +P L+ Sbjct: 357 FIREYGSEAFARYVGDALPLSRFLIEAASEGCDLGQAEGRAHMASNARPLWTALPDGALK 416 Query: 409 IYLRQELGNKLGILDDSQLERLMPKAAESGVSR 441 L E+ + + + +AA SG +R Sbjct: 417 RQLLGEIAELVQLDARDLSDLWSQEAARSGPAR 449 >UniRef50_C8WEJ5 DNA primase n=4 Tax=Zymomonas mobilis RepID=C8WEJ5_ZYMMN Length = 628 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 200/583 (34%), Positives = 291/583 (49%), Gaps = 25/583 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 +P F+++L R + LI VKL + G+ F ACCPFHNEKTPSF VN EK FYHCFGC Sbjct: 7 LPPEFLDELRQRITLSSLIGRTVKLTRAGREFRACCPFHNEKTPSFYVNDEKGFYHCFGC 66 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GAHG+AI F+ L F++ V ELA +++P + + + + TL+ +M Sbjct: 67 GAHGDAIRFVTETRGLSFMDAVRELAGQAGMDIPE--ANPAAVRQAKRTATLHDIMAEAA 124 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ + L R+YL+ RG+S + F +GFAP G + + + LI+ Sbjct: 125 KWFSEQLHGIEGAEVRRYLDNRGISPAIAQNFGLGFAPNGRGRLKNALSHHAV--EKLIE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG---------NDTPKYLNSPE 235 G+L++ + YDRFR R+M PI+D+RGRVI FGGR L +++PKYLNSPE Sbjct: 183 VGLLISVEGRDPYDRFRGRLMIPIKDQRGRVIAFGGRRLESIEGGNSLPDNSPKYLNSPE 242 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +F KGR LY + +A Q NR++VVEGY+DV+ LAQ GI+ AVA LGT+ T I+ Sbjct: 243 TPLFDKGRTLYNIDKASQAARRQNRIIVVEGYLDVIGLAQAGIHEAVAPLGTALTEHQIE 302 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 L+R + I C+DGD AG+ AA RA E AL G+ L F+ LP+G+DPD LV+++GK Sbjct: 303 RLWRIEDKPILCFDGDSAGQKAAVRAAERALVQARPGKTLSFVTLPNGKDPDDLVKEQGK 362 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET----LRIYL 411 AFE + + + L L+ Q+D +P+GRA LS L + E R Sbjct: 363 SAFEEVLSRPIALDRLLYRFEASQIDPQSPEGRAALSKRLDELAASCRDEFIARGYRSNF 422 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM----RILIGLLVQNPELATL 467 + G Q + AA +S R ++ L PE Sbjct: 423 KNLFYENFGWKSKKQQDSQTTIAATVTLSDLSTPTISDLECQYSRQILIGLSLYPEAIKQ 482 Query: 468 VPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 P L +RE L+ +S+P L + + N D Sbjct: 483 RLERLAELAVTDPKLKKWRETLITAVISEPDLDRDTIKAILKADANVDIDTWDIKKDLRF 542 Query: 527 D---KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 +IA +SL + D ++E R+ ++ + E Sbjct: 543 PFTRPDIAPDLAIESLVALIDLVVEERELATEEQQLKQVFTEE 585 >UniRef50_Q8DJB0 DNA primase n=2 Tax=Cyanobacteria RepID=Q8DJB0_THEEB Length = 694 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 186/585 (31%), Positives = 288/585 (49%), Gaps = 40/585 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + +IVD++ V L+K+G+ + CCPFH EKTPSFTV+ K FY+CFG Sbjct: 5 RLHPDTIEAVRQAVNIVDVVAEHVVLRKRGREYVGCCPFHEEKTPSFTVSPLKGFYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS--QIERHQRQTLYQLMD 121 CGA GNAI FLM K F E V +LA H + V Q ++ LY+++ Sbjct: 65 CGAGGNAIKFLMELQKRSFAEVVLDLAQRHQIPVRTLDSEQKQALQARLSLQEQLYEILA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 +FY+ +L+QP+ +A+ YL+ +R L E I +F +G+AP GW + Sbjct: 125 IATSFYEHALRQPIGQAAQDYLQRQRHLKEETIQQFRLGYAPAGWQVLYTYLVEQKGYPA 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + AG+++ G R YDRFR+R++ PI D +GRV+GFGGR L N+ PKYLNSPET I Sbjct: 185 ALVEQAGLIMPQRTGDRYYDRFRDRLIIPIMDTQGRVVGFGGRTLSNEEPKYLNSPETPI 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+KG+ L+GL +A+Q A+ ++ +VVEGY DV+AL Q G VASLGT+ + I+LL Sbjct: 245 FNKGQLLFGLDKARQAIAQTDQAIVVEGYFDVMALHQAGFPQTVASLGTALSQAQIKLLL 304 Query: 299 RAT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLV----- 350 R T +I +D D+AG+ AA RA+ A + G +LR + LP G+D Sbjct: 305 RYTESKQIILNFDADKAGQRAADRAIGEAADLVYRGDLRLRILTLPAGKDAADFFTVDEA 364 Query: 351 -RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + A++ ++QA + +L+ Q DL D + S L++++P TLR Sbjct: 365 TLAARRAAYQTLLDQAPLWLDWQIQTLVQQYDLEQGDQFQQASQALSELLAKLPNATLRS 424 Query: 410 YLRQELGNKLG--------ILDDSQLERLMP---KAAESGVSRPVP-QLKRTTMRILIGL 457 + LG L+++ +++ RP L++ L+ L Sbjct: 425 HYIHHCAELLGRHDSRLTLHLEEALRQQVRGYRWPGRSQKWQRPADYNLRQAAEEQLLRL 484 Query: 458 LVQNPELATLVPPLE---NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + E L+ +++ + L+R+++ EH G + Sbjct: 485 YLHRGEYRPLIRQTLQARDIEFSLSHHRWLWRQILAVEE-----------EHCGGRPDPD 533 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + + T D ++H+FD L E LI Sbjct: 534 DPYNAEWPLHSPTEAGTQLTDLDLVSHLFDRLDEAEDASLITPLL 578 >UniRef50_D1XA98 DNA primase n=5 Tax=Streptomyces RepID=D1XA98_9ACTO Length = 643 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 173/605 (28%), Positives = 277/605 (45%), Gaps = 56/605 (9%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + I ++ ++L+ G N CPFH+EK+PSF V+ K + Sbjct: 1 MAGRINDDDVKAVRDAVPIDAVVSEYLQLRNAGGGNLKGLCPFHDEKSPSFQVSPGKGLF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGC G+ I F+M D L F ETVE LAA + + +E G +R +R L + Sbjct: 61 HCFGCQEGGDTIAFVMKIDHLSFSETVERLAAKAGITLRYEEGGYNPSHQRGERIRLIEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY ++L+ P A R +L +RG + A F +G++P GWD++ + G + Sbjct: 121 HQAAAEFYVRALESPEAEIGRAFLAERGFDQDAAAHFRVGYSPAGWDHLTRYLRGKGFSD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + LI +G+ +G DRFR R+M+PI D G ++GFG R L ++ PKYLN+PET Sbjct: 181 KELITSGLSQDGRRGPI-DRFRGRLMWPISDTAGDIVGFGARKLRDDDNGPKYLNTPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+ K + LYG+ A++D A+ +R +VVEGY DV+A G+ A+A+ GT+ DHI++L Sbjct: 240 IYKKSQVLYGIDLAKKDIAKASRAVVVEGYTDVMACHLAGVTTAIATCGTAFGNDHIKIL 299 Query: 298 FR-----ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 R + VI +DGD AG+ AA RA E + + PDG DP L Sbjct: 300 RRLLMDNGSARVIFTFDGDAAGQKAALRAFEDDQKFAA---ETYIAIAPDGMDPCDLRLA 356 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G ++ +E PL F ++ + DL TP GRA A +++++ +++ + Sbjct: 357 KGDDSVRDLVEPRTPLFEFALRQIVGRYDLETPAGRAAALDEAAAVVAKIKTSSVQREVA 416 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSR------------------------------- 441 +L +GILD + + + A S+ Sbjct: 417 VQLAGLVGILDQEFVVHRVAQLAHWARSKGGDHGDRGGRGGPQGRGPRGGAPQQPAPAPA 476 Query: 442 --------PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTC- 492 + T R L+ L +Q P L + +DE P R+ + Sbjct: 477 PGFSGPALNLRSPAHRTERELLKLALQKPALVSPAFDAYGVDEFTAPPYAAVRQCIEEAG 536 Query: 493 -LSQPGLTTGQLLEHYRGTNNAATLEKLSMWD--DIADKNIAEQTFTDS-LNHMFDSLLE 548 Q + L T+ L ++ I ++T+ L H+ ++ Sbjct: 537 GAEQGIADNREYLVAVMDAAPDNTVRNLVTELAVEVFHGRIIDETYAGMQLVHVRLRAVD 596 Query: 549 LRQEE 553 R ++ Sbjct: 597 RRIDD 601 >UniRef50_D1PL95 DNA primase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PL95_9FIRM Length = 596 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 159/571 (27%), Positives = 271/571 (47%), Gaps = 41/571 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ +I +++ R DI ++I V+L+++G+ CPFHNEKTPSF V + Q ++CFG Sbjct: 1 MIPQEYIQEVVRRNDIEEVIGQYVQLRRRGRTLSGLCPFHNEKTPSFVVYPDTQSFYCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+ I+F+ Y+ L +VE+V++LA+ + +P E E RQ L ++ Sbjct: 61 CGAAGDVINFVRKYNNLGYVESVKQLASRAGMPLPEEED-----KEARARQRLLEINRCA 115 Query: 124 NTFYQQSLQ--QPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 ++ + L P A AR+Y + KRGLS I RF +G+AP + +L Sbjct: 116 ARYFYEQLNAKTPEAALARRYWKEKRGLSDAAIRRFGLGYAPEDFSGLLHYLRRRGFRED 175 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 L +G++ + +G YD FR RVM PI D RG +I FGGRVL + PKY+NSPET ++H Sbjct: 176 ELEHSGLIKRSAKGNLYDIFRHRVMVPIIDVRGSIIAFGGRVLDDSKPKYINSPETVVYH 235 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K R L+ L A++ ++ R ++ EGYMDV+++ + G + AV + GT+ T + ++LL Sbjct: 236 KSRTLFALNIAKKSASK--RYILCEGYMDVISMHEAGFDTAVCACGTALTPEQVKLLSEY 293 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 + V+ YD D AG+ A R+L + ++ + +DPD ++K G+E F+ Sbjct: 294 ADEVVLSYDSDEAGQKATERSLGL---FANSPVKVSVLSYQGAKDPDEFIKKYGRERFDM 350 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVP-GETLRIYLRQELGNKL 419 + + F + DL + DGR A+ +++ T R L + Sbjct: 351 LLNGTANPTEFQLKKAKAKYDLRSDDGRLNYIREAIDILTGHGVTPTARDVYAGRLAEET 410 Query: 420 GILDDSQLER----LMPKAAESGVSRPVPQLKR---------------------TTMRIL 454 G+ + L + L S +++ + R L Sbjct: 411 GVAKQAILSQMQGALRAADRRSHRKEQKEMVQKGIAADIRVPYTQGGDAALGAASASRQL 470 Query: 455 IGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 + L+Q+P+ V N+D LP + + + C + L+ Sbjct: 471 VAALLQDPDEVPYVRARLNMDTILLPEMQQALQAIFRCAEEKQPVNLTSLQQRLDDKAFQ 530 Query: 515 TLEKLSMWDDIADKNIAEQTFTDSLNHMFDS 545 + + D+ +A++ L + ++ Sbjct: 531 QVALAQAQNH--DQKLAQRDIDMYLERLQNA 559 >UniRef50_UPI00017446E1 DNA primase n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017446E1 Length = 613 Score = 487 bits (1253), Expect = e-136, Method: Composition-based stats. Identities = 178/602 (29%), Positives = 280/602 (46%), Gaps = 40/602 (6%) Query: 13 LLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAID 72 +LA TDIVDL+ VKL++ G N+ CPFH EKTPSF VN + YHCFGCG G AI Sbjct: 1 MLAATDIVDLVGRYVKLRRVGTNWRGLCPFHGEKTPSFYVNPARGSYHCFGCGVGGTAIR 60 Query: 73 FLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQSL- 131 F+M +D L+F++ V+ LA + + E ++ R L +L ++ ++ L Sbjct: 61 FVMEHDGLQFMDAVKRLADSAGIRIQEEVWDANAERTAKIRNGLVKLHRDISAWFHLLLM 120 Query: 132 QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTN 191 + VA AR YL+ RG++ + +G+AP ++K + L+ G+L Sbjct: 121 KGQVAEEARAYLKSRGINAATAKSWEMGYAPASTPMLMKWAEEHKYTENLLVAGGILARG 180 Query: 192 DQ-----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETDIFHKGRQ 244 D+ G+ Y RFR R+MFPIR+ G VI F GR+L ++ KYLNSPET +F+K + Sbjct: 181 DEDSGRGGQIYARFRHRLMFPIRNDYGEVIAFSGRLLDSNAKAAKYLNSPETMLFNKSKV 240 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 L+GL ++++ + NR +V EG +D++ + G VA LGT+ T H ++L R V Sbjct: 241 LFGLDKSKRAIIKANRAVVCEGQIDMIMAFESGFENVVAPLGTAFTEFHARMLKRHAEEV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + C+D D AG AA RA P G ++ LP GEDPD+L+RKEG +AF+A+++ Sbjct: 301 VLCFDSDNAGYKAAERAFHILAP---TGLVVKVAPLPQGEDPDSLIRKEGPQAFQAKLDD 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A + + +++ + R + +I + R Q++ +L IL+ Sbjct: 358 ARDFFDHMIDYASSTRNMAETREKTRFAGDMATMIQLLDNNIARDAAIQKVCVRLNILES 417 Query: 425 SQLERLMPKAAESGVSRPVP---------------------------QLKRTTMRILIGL 457 +++ A + R +I L Sbjct: 418 DFRKQVARLAKSIANQQQKAAAGKNGGNGASGSGASGATDRPEEAELPPPHPHARQMIRL 477 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE 517 V + E+ L+ LD ELV SQ L+T L + T A Sbjct: 478 AVTSAEVLALIRTHAQLDALAAVPGCELLELV--FKSQSDLSTSGGLSAFLTTLTPAEER 535 Query: 518 KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 S + ++ +T +L H+ LE + + R R GL+ +E + L Sbjct: 536 AFSRVVAEPPQRVSIETALQTLQHIEFQGLENLYQNVTTRLRQPGLAKDEVILLQQEVIR 595 Query: 578 LA 579 L Sbjct: 596 LK 597 >UniRef50_Q0BY76 DNA primase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BY76_HYPNA Length = 627 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 181/607 (29%), Positives = 276/607 (45%), Gaps = 33/607 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP F+++L AR D+I +VKL K+GK + PF EKTPSF VN +K+ + CF Sbjct: 7 RIPDGFVDELKARIRPSDVIGRKVKLTKKGKEWVGLSPFTAEKTPSFYVNDQKRIFKCFS 66 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G G+ I+F+M ++L F+E VE+LA + +P S + E R+ L + Sbjct: 67 SGMGGDVINFVMETERLSFMEAVEKLAEEAGMALP--KASPAAAEEYDHRKRLQAACEAA 124 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F++ L+ AR YLE RGL+ +++ +G+AP W L+ Sbjct: 125 ADFFEARLRSSEGAGARTYLEGRGLAASSWSKYRLGYAPDDWRRTRAHLQAEGFTDGELL 184 Query: 184 DAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHK 241 +AG++ ND+G YD FR R+MFPI D RG +I FGGR L D PKYLNS +T +FHK Sbjct: 185 EAGIIKENDKGGEPYDAFRGRLMFPIPDSRGGIIAFGGRALQPDAKPKYLNSGDTPLFHK 244 Query: 242 GRQLYGLYEAQQDNA--EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 LY A++ E L+V EGYMDV+A+ + G AVA LGT+ T + +QLL+R Sbjct: 245 STVLYRYKAAREALGHGEGGGLIVCEGYMDVIAMCEAGFGNAVAPLGTALTEEQLQLLWR 304 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 A + C+DGD+AG AA+RAL+ ALP+ GR + F+ LPDG DPD L+R G A Sbjct: 305 AGPEPVMCFDGDKAGLGAAYRALDRALPFAEPGRSVFFVLLPDGMDPDDLIRARGAGAMS 364 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++ +PLS L+ L TP+ +A L + + ++ ++L ++L Sbjct: 365 EQLAARLPLSELLWRRERDAEPLDTPERQAGLEARLIAACGHIRHPGVKSAYERDLKSRL 424 Query: 420 GILDDSQLERLMPKAAESGVSRP-------VPQLKRTTMRIL----------IGLLVQ-- 460 E + RP +P +L + L++ Sbjct: 425 RDHLWQLREAKRAANYQKRPGRPGRPGSAQIPPGGEEAQELLKQGGREKIGGLRLIMSAV 484 Query: 461 -NPELATLVPPLENLDENKLPGLGLFR-ELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK 518 NP L ++ L P R +++ + G + H + N Sbjct: 485 DNPGLLSIGAELLAQCAPAEPDAAFLRDAVLDLANDGIPIDRGTITAHLTKSGNIRAAGL 544 Query: 519 LSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIA------RERTHGLSNEERLELW 572 L + + L + + + R + LS +E Sbjct: 545 LKDYPVTPQIATNGSEAREWLIALEQFVAKRRSRDQETGSGTDSASADPTLSPQEWRRRL 604 Query: 573 TLNQELA 579 + E Sbjct: 605 QMVAERR 611 >UniRef50_C6ILW6 DNA primase n=16 Tax=Bacteroides RepID=C6ILW6_9BACE Length = 730 Score = 486 bits (1252), Expect = e-136, Method: Composition-based stats. Identities = 144/454 (31%), Positives = 232/454 (51%), Gaps = 11/454 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I +V I+ +L IVD++ V L+K+G N+ CPFHNEKTPSF+V+ K CF Sbjct: 1 MIDQVTIDRILDAAQIVDVVSEFVTLRKRGVNYVGLCPFHNEKTPSFSVSPAKGLCKCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN++ F+M ++++ + E ++ LA +N+E+ + + + R++++ + + Sbjct: 61 CGKGGNSVHFIMEHEQMSYYEALKYLAKKYNIEIKERELTNEEKQAQTTRESMFIVNNFA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++Q L+ V Y +RG ++I +F +G+ D + + ++ Sbjct: 121 RDYFQNILKNHVDGRSIGLAYFRQRGFRDDIIEKFQLGYCTESHDAMSQEALRKGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ D R DRF RV+FP+ G+V+ FGGRVL T KY+NSPE++ Sbjct: 181 LVKTGICYETDDHRLRDRFWGRVIFPVHTLSGKVVAFGGRVLSTATKGVKVKYVNSPESE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK +LYG+Y A+Q +R +VEGY DV+++ Q GI VAS GT+ T I+L+ Sbjct: 241 IYHKSNELYGIYFAKQAIVRQDRCFLVEGYTDVISMHQSGIENVVASSGTALTPGQIRLI 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK E Sbjct: 301 HRFTNNITVLYDGDVAGIKASIRGIDMLLE---EGMNIKVCLLPDGDDPDSFARKHNSEE 357 Query: 358 FEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+A + E F + LM P RA L + + IS +P +R +E Sbjct: 358 FQAFIHEHEKDFIRFKTDLLMEDAG-RDPIKRAELISNIVRSISVIPEAIIRDVYIKECS 416 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT 450 L I + + + P ++ Sbjct: 417 QHLRIEEKLLVAEVAKLREAQAEKANRPSYNHSS 450 >UniRef50_UPI000050F7A3 DNA primase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F7A3 Length = 739 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 155/459 (33%), Positives = 238/459 (51%), Gaps = 14/459 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I R I++L +RT I +++ V LK G + CPFH+EKTPSFTV + Y Sbjct: 1 MAGLIKREDIDELRSRTRIDEVVGEFVTLKTAGIGSLKGLCPFHDEKTPSFTVRPQVGMY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ FL ++L FVETVE LA + + +E G GP + + +RQ L ++ Sbjct: 61 HCFGCGESGDVFSFLQKVEQLSFVETVEALAGKIGMHLRYEDGKGPDREQASRRQRLLEM 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+ Q L+ R++LE RG F +GFAP WD++ + Sbjct: 121 HEVAQRFFTQCLESEQGQIGREFLEGRGFPLSSSKEFGLGFAPKSWDSLTSQLKRAGFTE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + ++ G+ +G YDRFR RV++PI+D R IGFG R L + PKYLN+PET Sbjct: 181 EEILAGGLASEGGRG-IYDRFRGRVVWPIKDMTSRTIGFGARRLYDDDKGPKYLNTPETA 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK + LYGL A++D A+ R+++VEGY DV+A G+ AVA+ GT+ +H++++ Sbjct: 240 LYHKNQVLYGLDLAKKDIAKTKRVVIVEGYTDVMAAHLAGVTQAVATCGTAFGPEHVKIV 299 Query: 298 FRA-----TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 R T VI +DGD AG+ AA RA E + Q PDG DP L + Sbjct: 300 RRLLGDDPTGQVIFTFDGDAAGQKAALRAFEFESEFTA---QTFVAVEPDGLDPCDLRMQ 356 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G A ++ PL F+ + + + DL + +GR + +++ + + Sbjct: 357 KGDGALRELIDGRKPLFEFVITTAISRYDLDSVEGRIAAVKASAEVLADIRDRNSLSHYY 416 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM 451 + + ++G+ D + + A SRP R Sbjct: 417 RFVAGRIGVDIDEVESAV--RDARKRPSRPQANQSRQPQ 453 >UniRef50_B2GBZ8 DNA primase n=12 Tax=Lactobacillus RepID=B2GBZ8_LACF3 Length = 631 Score = 486 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 170/618 (27%), Positives = 274/618 (44%), Gaps = 50/618 (8%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IPR I+ L + DI D+I ++LKKQGKN CPFH + TPSF+VN EKQ+++CF C Sbjct: 4 IPRETIDQLRNQVDIADVISQDIQLKKQGKNLMGHCPFHEDATPSFSVNEEKQYFYCFSC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G+ +L L F+E VE++A +++P E +GPS LY+L + + Sbjct: 64 HRSGDVFSYLEQAHDLSFMEAVEQVATTAGVDLPRE-SNGPSGESASPNTPLYRLHEEAS 122 Query: 125 TFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGW--DNVLKRFGGNPENRQS 181 Y L A YL KRG+S E+I +F +GFAP D ++K F + Q Sbjct: 123 RLYHHVLVNTVAGQPALNYLTKRGMSRELIGQFNLGFAPARGEEDLLVKYFTQKGIDYQL 182 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL----GNDTPKYLNSPETD 237 + +G+ + G+ +DRF +RV++PI++ G+ I F GR+L + PKYLNSPET Sbjct: 183 MRASGLFTEDQTGQLHDRFFDRVIYPIKNANGQPIAFSGRLLTKKATENAPKYLNSPETP 242 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K R L+ L +A++ + L + EG+MDV++ G+ +AS+GTS T + + ++ Sbjct: 243 IFNKRRTLFNLDQAKKAARKEGHLTLFEGFMDVISAFGAGVRSGIASMGTSFTDEQVAVI 302 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+ + CYDGD AG++A RAL LR + LP G DPD V+ G+ Sbjct: 303 ARTTDKLTICYDGDAAGQNAINRALTMLAASR---LTLRVVQLPAGMDPDEYVQANGQAK 359 Query: 358 FEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+ + A +AF + L ++L+ AL +++V R Q+L Sbjct: 360 FQEYLAHAEETPTAFRLHFLKQGLNLANQSELLHYVEAALREVAKVTDPVERDLYIQQLA 419 Query: 417 NKLGILDDSQLERL---------MPKAAESGVSRPVPQLKRT------------------ 449 + + ++ P ES +P R Sbjct: 420 KDYHLNPATLTGQVQELAATAAPRPAYPESSPRQPRQAGTRRYQSTPPTTTTAPSTQAPP 479 Query: 450 -------TMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP--GLTT 500 + L+ + NP + + V +EN P L + Sbjct: 480 LLGKVELAQQRLLREMFHNPAVRSHVGAIENFHFVDRPYQLLDAAAKEQLQRTGADEVDV 539 Query: 501 GQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERT 560 QL+ + ++ + + ++T D L + D +Q Sbjct: 540 AQLMGELTDAKLRTIVGQIEQR--VVPQAAVDETVDDCLAVLVDVAPIEQQIREKTAALQ 597 Query: 561 HGLSNEERLELWTLNQEL 578 + ++ + L EL Sbjct: 598 EAAALNDQQLITKLTIEL 615 >UniRef50_C6VS59 DNA primase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VS59_DYAFD Length = 674 Score = 485 bits (1249), Expect = e-135, Method: Composition-based stats. Identities = 154/453 (33%), Positives = 240/453 (52%), Gaps = 11/453 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RI + + DIV+++ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFG Sbjct: 2 RINPETVERIKHAADIVEVVGDFVSLKKKGANYSACCPFHNEKTPSFNVNPVRQIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G++I F+M+ D + + E + LA +N+EV E + + ++ R++LY +++ Sbjct: 62 CGAAGDSIKFVMDIDGIGYGEALRYLAGKYNIEVEEEELTDEETLRQNARESLYIILNFA 121 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 +YQ L A Y +RG + E+ +F +G++ WD+ K + + Sbjct: 122 KNYYQHQLHHSDEGQAIGLSYFRERGFTSEIRKKFELGYSLDNWDSFSKEALEKGYSAEI 181 Query: 182 LIDAGMLVTNDQGRS--YDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 L AG+L+ + + YDRFR RV+FPI + G+ I FG R+L + PKYLNSPET+ Sbjct: 182 LERAGLLIHKEGSHTAGYDRFRGRVIFPIHNIAGKTIAFGARILKTDKNQPKYLNSPETE 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++HK LYG+Y+A+ + +VEGY DV++L Q GI VAS GTS T + I+L+ Sbjct: 242 VYHKSEVLYGIYQAKNAIRQLEHCYLVEGYTDVISLHQAGIENVVASSGTSLTVEQIRLI 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T N+ YDGD AG AA R L+ L +G + + PD EDPD+ VR+ G EA Sbjct: 302 GRFTPNITILYDGDMAGIKAALRGLDLVLE---EGLNVNVVLFPDNEDPDSYVRRVGAEA 358 Query: 358 FEARMEQA-MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F+A ++ A F L+ + P A + + I ++P R Sbjct: 359 FKAHLKSASKDFITFKTEILLQDAG-NDPFKLAAVIQEVVNSIVKIPDAIKRQVFFHRTS 417 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRT 449 + + + + + ++P + +++ Sbjct: 418 EMMRVDEQMLITEGNKLLRKQHSAKPAERPRQS 450 >UniRef50_A7NG02 DNA primase n=2 Tax=Roseiflexus RepID=A7NG02_ROSCS Length = 652 Score = 485 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 169/628 (26%), Positives = 273/628 (43%), Gaps = 62/628 (9%) Query: 11 NDLLARTDIVDLIDARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCGAHGN 69 + + + DIVD I A V L+K G+++ CPFH N +TP+F V + Q +HCFGC A G Sbjct: 6 DQIKEKIDIVDFISAYVPLRKTGRSYVGFCPFHPNTRTPAFHVFPDTQSFHCFGCKASGT 65 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 DFLM + +EF E +E LA +++ + + + R L ++ F++ Sbjct: 66 IFDFLMRREGIEFREALERLAQRAGVQLHPR--TEAEEQQDRLRTRLLEVNAAAAAFFRH 123 Query: 130 SL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENRQSLIDAGM 187 L + AR Y+ KR + F IG+AP W +L + + AG+ Sbjct: 124 MLVKSQRGEEARAYVAKRRIDDATGEAFLIGYAPDDWSLLLSYLTERRGFAPEEIEAAGL 183 Query: 188 LVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYG 247 + ++ YDRFR R+MFPIR G ++ FGGR LG+ PKY+NSP+T +F KG+ LYG Sbjct: 184 AIHHETRGYYDRFRHRLMFPIRSASGEIVAFGGRALGDVQPKYMNSPQTPLFDKGKVLYG 243 Query: 248 LYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICC 307 L A+ + + ++VEGY+DV+ QYG VA LGT+ TADH+ L+ + ++ V Sbjct: 244 LDLARDAIRQSDAAVIVEGYVDVIIAHQYGFRNVVAPLGTALTADHVALVKKLSHRVYLA 303 Query: 308 YDGDRAGRDAAWRALETALP------------------YMTDGRQLRFMFLPDGEDPDTL 349 D D AG A + L+ ++R + LP+G+DPD + Sbjct: 304 LDADTAGARATLKGLQALQSQPEGELTAVISPQGVIALQRRQDVEIRILALPEGKDPDEV 363 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 +++ E + A + A P F +L +DLS+ GRA PL++Q+ + Sbjct: 364 IQEN-PEQWRAALAAARPAMDFYIETLTSDLDLSSGRGRAEAVERIAPLLTQIANPVEQA 422 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK---------------------- 447 + Q+L + I + L L KA + G RP Q + Sbjct: 423 HYIQQLARLIDIEEAHILAALSNKARQEGQRRPSDQGRATKVLEQQPGDANQQPDETPPP 482 Query: 448 RTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLF--------------RELVNTCL 493 T L+ +++ P V + D P L R L + Sbjct: 483 PTQEEYLLSWIIRYPTARAAVEEKLHRDLATYPALQSLMSGTIDELFTSDECRALWRAWI 542 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEE 553 + P + Q A +++ + A + A + D+L + + Sbjct: 543 AAPTGSDPQAWATTLYAPLDAVAQRVL--ELHAPQPQAYRIVNDALECATILQRDAAKRW 600 Query: 554 LIARERTHGLSNEERLELWTLNQELAKK 581 L+ R + E + L+Q + K Sbjct: 601 LVQIARMQTAATGEAEQEILLDQLVQVK 628 >UniRef50_C6XZ19 DNA primase n=2 Tax=Pedobacter RepID=C6XZ19_PEDHD Length = 660 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 151/439 (34%), Positives = 236/439 (53%), Gaps = 9/439 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + IN ++ I +++ V LKK+G + CPFHNEKTPSF V+ K Y CFG Sbjct: 1 MINQDTINKIMDTARIEEVVGDFVALKKRGTSLIGNCPFHNEKTPSFNVSVTKGIYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+A+ F+M+++K + E ++ LA +N+EV S + ++ R++LY + + Sbjct: 61 CGKGGDAVHFIMDHEKYSYPEALKYLAQKYNIEVEETVQSPQNIEAQNARESLYIVSEYA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L A Y ++RG +++ +F +G++P WD +++ G + Sbjct: 121 AGYFANELWTGNDGRAIGLSYFKERGFREDILKKFQLGYSPDVWDALIQNAVGAGHKEEY 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 L G+ + ND+G+ YDRFR RVMFPI + GRVIGFGGR L + PKY+NSPE+DI+ Sbjct: 181 LEKTGLAIRNDKGKLYDRFRGRVMFPIHNFTGRVIGFGGRTLKTDKNVPKYVNSPESDIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYGLY A++ + + +VEGY DV+A+ Q GI VAS GTS T + I+L+ R Sbjct: 241 HKSNVLYGLYHAKKAIRDQDNCYLVEGYADVLAVHQAGIENVVASSGTSLTTEQIRLIGR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T NV YDGD AG A+ R L+ L +G ++ + PDG DPD+ + G F+ Sbjct: 301 FTENVTILYDGDAAGIKASLRGLDMILE---EGLNVKVVLFPDGHDPDSYMHHVGSGEFK 357 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +E + L+ + + P RA + + I+++P + +E + Sbjct: 358 QYIEGNRRDFILYKATILLKEAG-TDPIKRAGIIRDIIESIAKIPDDIKAAVFIRECSSL 416 Query: 419 LGILDDSQLERLMPKAAES 437 L + + L L A Sbjct: 417 LQVEERILLSELNKMRAAK 435 >UniRef50_UPI0001C377B6 DNA primase n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C377B6 Length = 579 Score = 484 bits (1246), Expect = e-135, Method: Composition-based stats. Identities = 149/564 (26%), Positives = 242/564 (42%), Gaps = 35/564 (6%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 F+ L I ++ + V L ++G+N+ CPFH+EKTPS TV E Q ++CFGCG Sbjct: 4 DDEFLYTLRNANPIETVMGSYVNLIRRGRNYVCSCPFHSEKTPSCTVFTETQSFYCFGCG 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G+ I F M + L+F+E V+ LA +EVP S +R R +Y++ Sbjct: 64 AGGDVITFTMKIENLDFMEAVKLLAQRSGIEVPERNNRDSSYAKRKTR--IYEMNRIAAN 121 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 Y +L + S +Y R L+ + I ++ +G+AP W+ + + DA Sbjct: 122 LYYTNLFKGSDKSGLKYFADRKLTPQTIKKYGLGYAPDSWNFLTDHLKSKGYTDDEIADA 181 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQL 245 + GR++D FR+RVMFPI D RG +IGFGGRVL + PKYLN+ T +F KG L Sbjct: 182 WLGGQ-KNGRTFDMFRKRVMFPIVDMRGNIIGFGGRVLDDSKPKYLNTGATPVFDKGSNL 240 Query: 246 YGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVI 305 + + A+ RL++ EGYMDV+A+ Q G + VA+LGT+ T D +L+ VI Sbjct: 241 FSMNFAKNA--NTKRLILCEGYMDVIAVNQAGFDNVVATLGTAITPDQARLISHYAEEVI 298 Query: 306 CCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQA 365 YD D AG+ A +A+ G Q + + + +DPD ++K G F ++ + Sbjct: 299 IAYDSDGAGQKATQKAINHFADV---GLQTKIIHMEGAKDPDEYIKKFGVNRFRLLLDGS 355 Query: 366 MPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDS 425 F+ + +DLS+ GR L +++ + R K I Sbjct: 356 DDAIDFMLDKCEDGLDLSSEMGRVELLKRTSKVLAGIESALEREVYISRTSKKCDIPVQV 415 Query: 426 QLERLMPKAAESGVSRPVPQLKR-----------------------TTMRILIGLLVQNP 462 + ++ S + + ++I L++ P Sbjct: 416 LKSHIDDMLKKNRYSAKKNEWRNIKANTNFVRDDVNPEAVNHRKEARAEEMIIYYLLKRP 475 Query: 463 ELATLVPPLENLDENKLP-GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 + V D P ++ L++ T L + + Sbjct: 476 QEWEDVEKAIPPDSFVTPFHKKVYSALLDKMRDADKFTILMLNGEFTQEEMGRISGIAAK 535 Query: 522 WDDIADKNIAEQTFTDSLNHMFDS 545 +D+ I + D + S Sbjct: 536 NNDLP---ITFEGVLDCAEVLKKS 556 >UniRef50_C8X4F6 DNA primase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X4F6_DESRD Length = 573 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 169/581 (29%), Positives = 264/581 (45%), Gaps = 26/581 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R I + AR +IVD++ V L++ G + CPFH E PS +V+ EK F++ Sbjct: 1 MARR-SGDTIEAIKARLNIVDIVRRYVDLRQVGDRWAGVCPFHQETKPSLSVHPEKGFFY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ DF + LEF + +EELA + + +Q ++ +R L ++ Sbjct: 60 CFGCQASGDLFDFYCMINGLEFRQALEELAREAGVTLNDRPDPQAAQRQQERRACL-EMH 118 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 +F+Q+ L+ A AR+YLE RG+ + F +G+AP W + + + Q Sbjct: 119 SLAQSFFQRQLESAEARQAREYLEARGVDETMQDYFGLGYAPEQWQALCGHLQQSGYSPQ 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFH 240 + AG+L N +GR YDRFR RV FPI D G+VI FGGRV+G PKYLNS ++ I+ Sbjct: 179 KGVTAGLLSQNKKGRIYDRFRGRVTFPIHDLGGKVIAFGGRVIGEGEPKYLNSSDSPIYK 238 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG LYGLY+A+Q + +L+ EGY DV+AL +YG A LGT+ T + ++ L Sbjct: 239 KGAHLYGLYQARQAVTQSKEVLLTEGYADVIALVRYGFTNACGVLGTALTEEQVRRLAGL 298 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 V YDGDRAGR AA R+ E L G Q R + LPDGED D+L++ +G F+ Sbjct: 299 ARRVTLVYDGDRAGRQAASRSAEMLL---RQGVQCRVVSLPDGEDVDSLLQGQGAAGFQR 355 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 + +A +F L + A ++ + T + Y + L Sbjct: 356 YVREAEEGLSFCLRVLRESGVAR------EILRWATEFLNGLHDSTWQAYFLPRVAAGLE 409 Query: 421 ILDDSQLERL--MPKAAESGVSRPVPQLKRTT-----MRILIGLLVQNPELATLVPPL-E 472 + + + +A SG ++ Q T R L+ + P + L Sbjct: 410 LSETELRRAVDGNREAKTSGGAQQRGQRLERTSPGQRDRELLHFAISFPAYTKRLDVLGL 469 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + G L+R++ + +LL H ++ + + Sbjct: 470 DHALATERGRQLWRKI-------QAFSREELLLHLDEGEKRFYIQSELDPIPAERERLVW 522 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWT 573 + L+ + + + G + E L Sbjct: 523 EGIEQFLHRTRQDEKLHEMRTALKKAQEAGDAEEMDRLLQA 563 >UniRef50_C4FWR0 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FWR0_9FIRM Length = 632 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 167/638 (26%), Positives = 274/638 (42%), Gaps = 65/638 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MAG IP I + DIV +I+ V L K+G N+ CPFH + PSF+V+ +KQ Y Sbjct: 1 MAG-IPNDIIESVKKEADIVAIINQYVALTKRGNNYTCSCPFHEDNNPSFSVSPDKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN FL + + F E V+++A + N+ + + + Q L L Sbjct: 60 CFSCGRGGNVFGFLQEMEGISFPEAVKKVAELSNIALDSRYFETGQAVSQPH-QRLLDLH 118 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L Q SA YL++R L E ++ F +G AP +++ ++ Sbjct: 119 EKARDFYHFYLTQTVAGESAYAYLKQRELKEETLSDFHLGLAPDNPQLLIQYLSEAGFSQ 178 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT------PKYLNS 233 ++ +G+ QG DRF R++FP+ D++GR + F GR+ D+ KY+NS Sbjct: 179 DEMLQSGIFYEASQGLM-DRFHGRIIFPLEDRQGRTVAFSGRIYQADSGDEQKVAKYVNS 237 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PETDIFHK +Y +A+ N++L+ EGY+DV+AL+Q G AVA++GTS T+ H Sbjct: 238 PETDIFHKSSLIYHFAQARPHIRRLNQVLICEGYLDVIALSQAGFPQAVATMGTSLTSQH 297 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 + L + T +I +DGD AG+ A RA E +L ++ + +P DPD ++ Sbjct: 298 LSQLGKVTQEIIFAFDGDAAGQKATARAFELSLTLPRH--TVKAVAIPGKMDPDEWIKSR 355 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G ++F++ + QA+P FL N L + L+ + RA L L++Q+P R Q Sbjct: 356 GADSFKSLINQAIPRYEFLKNYLQQEYQLADLEQRALYINRLLDLVAQLPSPIERTMRLQ 415 Query: 414 ELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT----------------------- 450 L + G+ E+L + + Sbjct: 416 ALAEEFGLDLAMLEEQLAQVSYRQRKDQAKESDSPKQDSADKWAKAHSSGFSDQALPSKP 475 Query: 451 --------------------MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVN 490 R ++ L+ N + LE P + Sbjct: 476 VQAKPGVLDGQIKSLKAYHCERYILSNLIFNEPAWQFIEGLEQPLLFVHPSAQAIYYQLE 535 Query: 491 --TCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLE 548 L +L+ + L L D +EQ D L + + E Sbjct: 536 HFYYEKGGRLPLNGILDVEASPDEQQYLASLIWDHAQTD--YSEQAMQDCLKTIDAAFTE 593 Query: 549 LRQEELIARERTHGLSNEERL------ELWTLNQELAK 580 ++ +EL + + + ++ E+ L+++L K Sbjct: 594 IQLKELQTKLKQAQIRGDKTKMNEYLVEILRLSRQLKK 631 >UniRef50_B2UM01 DNA primase n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2UM01_AKKM8 Length = 599 Score = 484 bits (1245), Expect = e-135, Method: Composition-based stats. Identities = 166/598 (27%), Positives = 270/598 (45%), Gaps = 25/598 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 GRI I +L TDIVD++ + + LK+ G + ACCPFHNEKTPSF V+ +Q + CF Sbjct: 2 GRIDEDSIRRVLEATDIVDVVGSYLPLKRAGSRWKACCPFHNEKTPSFIVDQSRQNFKCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+AI F+M + L F +TV LA + + E + R R L Sbjct: 62 GCGEGGSAITFVMKMENLGFADTVRRLAEKAGISIVEEVYDAAEERRRKARTALLVAHKK 121 Query: 123 LNTFYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 F+ + L P A AR YL RG ++ R+ +G+AP L Q Sbjct: 122 AAGFFHRLLLCSPKAAEARAYLNSRGYGADMAKRWQVGWAPDSSREFLAWARREGIPDQV 181 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 LID+G+ ++G Y RFR+R+MFPI + G + F GR+L + KY+NSPET IF Sbjct: 182 LIDSGLANRGERGDLYARFRDRLMFPINNVYGECVAFSGRILRPQENVGKYVNSPETAIF 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG ++ L +A+ + + L+ EG +DV+A + GI++AVA LGT+ T +H ++L R Sbjct: 242 KKGDVVFALDKARGPMGKSGKALLCEGQIDVIACHEAGISFAVAPLGTAFTPEHARILSR 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + ++ C+D D+AG AA RA P+ G+ + + LP G+DPD+ +++EGKEAF Sbjct: 302 YASRIVLCFDADKAGMAAADRAFRELAPF---GKDIYLVNLPAGDDPDSFMKREGKEAFS 358 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E+A L A + L++ + R ++ ++ Sbjct: 359 GMVERARSFFEVRIERARESGLLDDAASSAAFAREMTALLACMSDSVARDLATADVATRM 418 Query: 420 GILDDSQLERLMPKAAESGVSRPVPQLKRTTMR--------------ILIGLLVQNPELA 465 + D+ + G + ++T +L L +QN Sbjct: 419 RMAADNLRGAVRMAGRRKGQEQAQSAERKTAEEVPQHPPVKMDRAVAVLCELALQNSRAQ 478 Query: 466 TLVPPLENLDENKLPGLG---LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW 522 L+ + L + ++++ S Q L L+ Sbjct: 479 GLIVDRIEELLEPMRLLQGGGILKKILARLPSPDSPAAVQAFLVSLPQPERDALGMLN-- 536 Query: 523 DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + +++ ++ + + + LE L+A RLEL L+ +L + Sbjct: 537 LEPIPIPDVDRSVQEACSGIAKAALERHIASLMAELADPSTDAARRLELSKLSVDLKR 594 >UniRef50_C5RBJ6 DNA primase n=1 Tax=Weissella paramesenteroides ATCC 33313 RepID=C5RBJ6_WEIPA Length = 621 Score = 483 bits (1244), Expect = e-135, Method: Composition-based stats. Identities = 157/612 (25%), Positives = 263/612 (42%), Gaps = 41/612 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP+ + ++ R +IVD++ V+LKKQG+N CPFH E+TPSF+VN EKQ +H Sbjct: 1 MA-RIPQNLVEEIRERVNIVDVVSPYVQLKKQGRNLFGKCPFHEERTPSFSVNEEKQIFH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIE-RHQRQTLYQL 119 CF CG GN FLM + L F + V ++A +++ ++ + + L +L Sbjct: 60 CFSCGRGGNVFSFLMEIENLSFPQAVAKVAPQAGVDLDEAYLDNDQNVQVDPEIKALREL 119 Query: 120 MDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + Y L A YL RGL + I F +G+AP G + + F + Sbjct: 120 YEEATKLYHHLLVNTASGEEALSYLTSRGLDEKTIDAFMLGYAPEG-NILYDYFQTQKVD 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 Q L + + V G +DRF RV+F IRD G I F GR L +D PKY+NSPE+ Sbjct: 179 YQLLRKSELFVEWSDGSLHDRFANRVLFTIRDSAGHPIAFSGRKLTQNDDEPKYINSPES 238 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F+K +L+ L A+ + +++ EG+MDV+A Q G+ VAS+GTS T++ IQ Sbjct: 239 LLFNKSAELFNLDLAKDTIKKKKHVILFEGFMDVIAAFQAGVQNGVASMGTSLTSEQIQR 298 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L R T+ + YD D AG+ A RAL+ + + +PD +DPD +R Sbjct: 299 LSRMTDKISISYDADMAGQKATKRALDLITQQGR--LSAQIIHIPDNQDPDEYLRSNDAT 356 Query: 357 AFEA-RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF + F L +L + AL +I+ V +R ++L Sbjct: 357 AFNQVLVHNVEDPVTFNLRYLQIDRNLHNQTELFSYISDALVVIATVKEPVIREQFLRQL 416 Query: 416 GNKLGILDDSQLERLMPKAAESGVSR---------------------------PVPQLKR 448 N+ + ++ +++ P + R Sbjct: 417 ANEFDLSYEALQDQIRPILLQKQAQRSSGATNTESGNRQKARHQSFPDNQIIKKSVTRIE 476 Query: 449 TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELV---NTCLSQPGLTTGQLLE 505 +IL+ ++++ ++ V N +P L+ + QP ++ Sbjct: 477 KAEQILLAWMLRDNDVWLQVTNRANFSFQDVPYETLYMIAMAYREEYQQQPATDMAAFMD 536 Query: 506 HYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN 565 + + L L D + + ++ + + D + ++R+ Sbjct: 537 YVQKPELTRILASLEEIDSELFMD--REQVSEYIRVISDEAPLEEKIRQLSRDIKEANQL 594 Query: 566 EERLELWTLNQE 577 + + L+ E Sbjct: 595 HDHARIAQLSVE 606 >UniRef50_A0LHK3 DNA primase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHK3_SYNFM Length = 601 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 162/588 (27%), Positives = 276/588 (46%), Gaps = 28/588 (4%) Query: 13 LLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGNAID 72 + DIVD++ V+L++ G CPFH EKTPSF V+ E Q Y+CFGCG+ G+ ++ Sbjct: 5 VKQAVDIVDVVGQVVQLRRSGNRHLGLCPFHQEKTPSFHVDAENQLYYCFGCGSGGDVLN 64 Query: 73 FLMNYDKLEFVETVEELAAMHNLEVPFEAG-----SGPSQIERHQRQTLYQLMDGLNTFY 127 F+M + + F E + LA +++ +P G + R +R+ LY+++ F+ Sbjct: 65 FVMKHRNVAFGEAIRYLAERYHIALPERDHVEGATPGAIESARKEREELYRILRSAADFF 124 Query: 128 QQSLQ-QPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 L P AR+Y+ +RGL EV+ +GFAP WD++ + + + I AG Sbjct: 125 YDQLHHSPEGRIAREYIARRGLPAEVVETERMGFAPQSWDSLSRHLANLGYDVEPGIGAG 184 Query: 187 MLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG---NDTPKYLNSPETDIFHKG 242 +L + + R YDRFR R++FPIRD+ GR++ FGGR L D PKYLNSPET ++HKG Sbjct: 185 LLARSTGKDRVYDRFRNRLIFPIRDEGGRIVAFGGRSLSADLKDEPKYLNSPETAVYHKG 244 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 R LY L A++ + + ++VEGYMD++A G VA+LGT+ T +++L R ++ Sbjct: 245 RLLYQLARAREACRQVRQTVLVEGYMDLLAFHARGFFRVVATLGTALTPHQVRILSRMSD 304 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 V+ YDGD AG A R L L + + + PDG DPD +R++G E FE + Sbjct: 305 EVVMAYDGDEAGDKAMLRGLPLFLQ---ENVAVSCVRFPDGMDPDDFLRRDGLEGFEKLL 361 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 L A+ ++ D + R +++ P+ V L+ + ++L + Sbjct: 362 RSRQELGAYAVKRILDGWD-GSASARLKIAAELRPIFDAVRQPLLKSEYLRLAADRLCVS 420 Query: 423 DDSQLERLM--PKAAESGVSR-------PVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 ++ ++L + E SR P +T ++ LL++ P+L Sbjct: 421 EEVLNQQLRHDRRTPERPYSRSYRTPVLPGISETQTLEEKILRLLIRYPDLIEQADSSGA 480 Query: 474 LDENKLPGLGLFRELV--NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 L+ + P L ++ + + + + + + + Sbjct: 481 LEYFQEPKLRALAMVLVGTPHAPESEFNASIVYDELADPESKEMFTRFMLESAELAEPRV 540 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + D L + L+ R +L + + + + E+ Sbjct: 541 Q--LNDWLIALTRRELKQRSLDLDTALKAAV-REGDSDRVRHILVEIQ 585 >UniRef50_C5EJG0 DNA primase n=4 Tax=Clostridiales RepID=C5EJG0_9FIRM Length = 638 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 150/428 (35%), Positives = 221/428 (51%), Gaps = 7/428 (1%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCG 65 P I ++ + DIVD+I VKL+K+G N+ CPFHNEK+PSF+V+ KQ Y+CFGCG Sbjct: 4 PDEVIEEVRMKNDIVDVISGYVKLQKKGANYFGLCPFHNEKSPSFSVSPGKQMYYCFGCG 63 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A GN + F+M Y+ F E + LA + +P S ++ + R L ++ Sbjct: 64 AGGNVLTFVMEYENYTFQEALAHLADRAGVSLPKMEYSKEAREQAEHRARLLEVNKLAAN 123 Query: 126 FYQQSLQQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 ++ L+QP +YL +RGL + I F +G++ D++ + G L D Sbjct: 124 YFYYQLKQPQGKLGYEYLHDRRGLLDDTIVHFGLGYSNKTSDDLYRFLKGKGYEDSFLKD 183 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G++ ++G D+F RVMFPI D RVIGFGGRV+G+ PKYLNSPET +F K R Sbjct: 184 TGLVTLEERGG-RDKFWNRVMFPIMDVNNRVIGFGGRVMGDGEPKYLNSPETKLFDKSRN 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ LL+ EGY+DV++L Q G AVASLGT+ T+ H +L R T+ V Sbjct: 243 LYGLNYARTS--REGYLLICEGYLDVISLHQAGFTNAVASLGTAFTSQHANVLKRYTDQV 300 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I YD D AG AA RA+ G ++ + + +DPD ++ G +AF R+++ Sbjct: 301 ILTYDSDGAGIKAALRAIPILKEV---GMSIKVLNMKPHKDPDEFIKNMGADAFRQRIKE 357 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A F + L + P+ + R + Q R Q + + I D Sbjct: 358 AKNSFLFEVDVLRQGYQMDDPEQKTRFYQETAKKLLQFGEALERENYLQAVAREQMIPAD 417 Query: 425 SQLERLMP 432 + Sbjct: 418 ELRGLVNR 425 >UniRef50_UPI00016C0A50 DNA primase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0A50 Length = 579 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 154/584 (26%), Positives = 260/584 (44%), Gaps = 23/584 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 FI + DIV LI L K+G ++ CPFHNEKTPSF V+ +KQ Y+CFG Sbjct: 3 FAEDFIEKIRTYIDIVSLISEYTNLVKKGASSYIGKCPFHNEKTPSFVVSEDKQMYYCFG 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGS-GPSQIERHQRQTLYQLMDG 122 CG GN I F+M + L F E +E LA N+ + ++ ++ ++ ++ L Sbjct: 63 CGVGGNVITFMMEKENLSFGEAIESLAIRANIPLEYDNSRINNNREAFFKKDVIFDLYKK 122 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY +L + RQYL RG++ + I F +GF+P ++ + K + L Sbjct: 123 AARFYYYNLTRNTPEYVRQYLVDRGINKDSIKIFGLGFSPNSFNALYKYLRSEGVTNELL 182 Query: 183 IDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 +++G+ V N + G YDRF R+MFPI +VI FGGRV GN+ PKYLNS E IFHK Sbjct: 183 VESGLCVLNHNSGLIYDRFVNRLMFPIFSPTKKVIAFGGRVFGNENPKYLNSSENLIFHK 242 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 LYGL A+ ++VEGYMDV+A+ + G VASLGT+ T +LL R T Sbjct: 243 SNNLYGLNLAK--MKNHEYYILVEGYMDVIAMHREGFTNTVASLGTAFTESQAKLLKRYT 300 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 +N++ YD D AG+ A +A + +G ++ + L +DPD ++K G E + Sbjct: 301 DNIVIIYDSDNAGQKATLKASKIL---RDEGFSVKILELNGAKDPDEFLKKYGNEKLQNA 357 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + A + + DL+ + + +I+ + + E+ + + Sbjct: 358 ITVANSDIWYKITKIQMLYDLNNLPEKIKFLEQISSIIANLQNSIEQQLYIDEISTRFNV 417 Query: 422 LDDSQLERLMPKAAESGVSR---PVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 + + + + ++ K L+ +L P + + + Sbjct: 418 NKSAIEIEIKKRIVNTKENKIVYENHSKKSDIEVDLLSVLYHTPTIYDSISEYVFPELFT 477 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKN--IAEQTFT 536 + ++ + T L + Y + + + + D K + + T Sbjct: 478 EGVKRNIAI---SLINDRSIDTALLNKKYPNVEDQKIISSIIIGKDGIYKEKFVLYKIVT 534 Query: 537 DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 D++ + ++ I + + + E+ L L + K Sbjct: 535 DAIKILNNAY-------YIEQLKNLSANPEKIQHLMKLRNSIVK 571 >UniRef50_B3QW33 DNA primase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QW33_CHLT3 Length = 642 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 160/627 (25%), Positives = 264/627 (42%), Gaps = 52/627 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP I+++ DIVD++ V+L++ G NF A PF +EKTPSF V+ EKQ Y CF Sbjct: 2 RIPEEKIDEIRRNLDIVDVVSDYVQLRRAGSNFKALSPFTSEKTPSFIVSPEKQIYKCFS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEV-PFEAGSGPSQIERHQRQTLYQLMDG 122 G GN F+M +K+ F++ V+ LA + + FE S + + Y + Sbjct: 62 TGKGGNVFTFVMEMEKIGFIDAVKMLAPRAGVSLAEFERHSPDAAAPSDPNEEYYNTLTW 121 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++ P + Y +RG+ E I+ F +G+A WD + + + + L Sbjct: 122 SAKFFHSAMNLPEGKTCYDYFRERGILPETISAFGLGYAFDDWDKLHHAAQKDGISSEIL 181 Query: 183 IDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 + G++ ++G + YD FR R MFPI G+V+GFGGR+L D PKY+NSPE+ I+ Sbjct: 182 SELGLIKYTEKGQKYYDAFRARAMFPIFSPGGKVVGFGGRILTGQKDAPKYINSPESKIY 241 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + L+ + A+ + ++VEGYMDV++L Q GI AVAS GTS T + +LL R Sbjct: 242 EKSKILFAMNFAKDEIRRREEAILVEGYMDVISLHQVGIKNAVASSGTSLTTEQARLLKR 301 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T N++ YDGD AG A R ++ + +G + LPDG DPD+ VR+EGK+ F Sbjct: 302 YTKNILFIYDGDAAGIKAMMRGIDVLIE---EGLHASVLTLPDGNDPDSFVREEGKDTFL 358 Query: 360 ARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + ++ F L +P+ L +S++P E +EL K Sbjct: 359 SFIKAHRSSFLDFKLQVLENDGGFESPEATTESIRALLESLSKLPDELALEMYLKELSQK 418 Query: 419 LGILDDSQLERLMPKAAESG------------------------VSRPVPQLKRTTMRIL 454 L + + + L + P ++ R Sbjct: 419 LDVGLSTVQKELGKIQNRRRKPSRQPMPSSYPVEAFPEPLPLPEQAPPDEEIVSVAERTF 478 Query: 455 IGLLVQNPELATLVPPLEN-----LDENKLPGLGLFRELVNTCLSQPGLTTGQ------L 503 + +++ V + + + ++ + Q Sbjct: 479 LKAFLESTYHGFTVLEFVDSHKEIFNFRHDWTRLIVDFMLARYEHAKAADSLQNFDLPNE 538 Query: 504 LEHYRGTNNAATLEKLS-------MWDDIADKNIAEQTFTDSLNHMFDSLLEL--RQEEL 554 L + + L W + A + + L+ +L Q Sbjct: 539 LNYLDDEAARNFISSLLVDESVSEKWPTDSPSMYARRCLSAFLDATGKLILSRYTEQRHA 598 Query: 555 IARERTHGLSNEERLELWTLNQELAKK 581 +E ++ E+ L K+ Sbjct: 599 AMQEMEQTADPAKQEEILHRLNSLRKE 625 >UniRef50_Q0AWU3 DNA primase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWU3_SYNWW Length = 593 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 163/573 (28%), Positives = 267/573 (46%), Gaps = 25/573 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA + ++L R DIV+++ V L ++G + CPFH EKT SF V +K ++ Sbjct: 1 MAT-YDDQVLEEILNRLDIVEIVSESVNLSRKGNRYWGLCPFHQEKTASFCVTPDKNMFY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ F+M D LEF E +E LA +E+ S + R+ + ++ Sbjct: 60 CFGCHAGGDIFSFVMKRDGLEFREAMEYLAGKAGIEL----VKSRSGKQTDHRKPVIEVN 115 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 FYQQ L + AR+YL +RGL I ++ +G+AP GW + + +++ Sbjct: 116 QAAVEFYQQVLAGKLGQEAREYLRRRGLEAATIKKYQLGYAPDGWTRLEEHLLKKGYSQE 175 Query: 181 SLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L +G++ ++ YD R R++FPI G ++G GGRVL + PKYLN+PET++F Sbjct: 176 YLKLSGLIKRSENRNNFYDLLRRRLVFPIMHYNGDIVGLGGRVLDDSLPKYLNTPETELF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K + LYGL++A+ + N+ ++VEGYMD + L Q GIN VA++GT+ T++ +LL R Sbjct: 236 SKRKVLYGLFQARDSIRQANKAIIVEGYMDCIKLQQLGINNVVATMGTALTSEQARLLQR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 V+ YDGD AG+ RALE +G + + LP GEDPD + K GKE F Sbjct: 296 YCEKVLLLYDGDEAGQRETIRALEIL---GNEGLKASVVSLPMGEDPDDYIEKYGKEEFL 352 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + + F N + + + + R I Q+ E + Y + L K Sbjct: 353 RYIQNNKLSNIEFKINRYLSREKELNLESQIRTINYLRKDIGQLNSELEKDYYIKILARK 412 Query: 419 LGILDDSQLERLMPKAAE-SGVSRPVPQLKRTTMRI--------LIGLLVQNPELATLVP 469 L I ++ L + + SG+ R ++ R ++ ++ + + PEL + Sbjct: 413 LKIEENIVYRELKKRERDISGIKRNKSKIIRDNIKYVNYGINEKILAAMFKKPELFEYIK 472 Query: 470 PLENLDENKLPGLGLFRELVNTCLSQ---PGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 L+ + L + L LL + +G +A L M ++ Sbjct: 473 NRIGLEFLEERDLRALAGIYEKLKDNDSDDHLERLGLLANQQGFGSAFARLALLMEEESL 532 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARER 559 + + + E + R + Sbjct: 533 PGEM---EIKRFIRQVERKEEEQAWKNQFYRLK 562 >UniRef50_B8EK34 DNA primase n=1 Tax=Methylocella silvestris BL2 RepID=B8EK34_METSB Length = 647 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 183/625 (29%), Positives = 284/625 (45%), Gaps = 53/625 (8%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++D+ AR + +++ RVKL + G+ + PF+ EKTPSF VN +K + Sbjct: 2 RFSPSFLDDVKARLPVSEVVRRRVKLIRAGREWKGLSPFNTEKTPSFFVNDQKMAWFDLS 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G +GN DF+M + L F E VE LAA + +P S ++ + +R L++ + Sbjct: 62 AGKNGNIFDFVMETEGLSFREAVERLAAEAGVPLP--QASPEAEAQEQKRAGLHETLGLA 119 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ L P AR YL R LS E F IG+AP + G R ++I Sbjct: 120 ADFFCAQLAGPSGGKARDYLTGRALSAEAQKNFRIGYAPADKFALRDHLAGKGVARDTMI 179 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETDIFHK 241 +AG+L+ + YDRFR+R++FPI D+ GR I FGGR L PKYLNSPET +FHK Sbjct: 180 EAGLLIHGEDIAVPYDRFRDRIIFPICDRSGRPIAFGGRALSAEAQPKYLNSPETTLFHK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G L+ + A+ +R++VVEGY+DV+AL++ G VA LGT+ T D +LL++ T Sbjct: 240 GGVLFNHHRARTAAHSSDRIIVVEGYVDVIALSEAGFAETVAPLGTALTPDQAELLWQMT 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C+DGD+AGR AA+RA++ ALP + GR LRF LP+G+DPD L+R G A Sbjct: 300 AEPILCFDGDKAGRKAAYRAIDMALPLIGAGRSLRFALLPEGQDPDDLIRSAGPHAMADV 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + QA+PL+ ++ D STP+ RA + ++ ETLR Y R E + Sbjct: 360 LSQALPLADLIWRRETEGADFSTPERRAGFERRLDEIAQEIRDETLRRYYRDEFRQRRQS 419 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLK---------------------------------- 447 L Q + E + Sbjct: 420 LFAPQRSTVKAPWREGSRPAQGARRGFGPGRDGFQTADAAPVRLTASPSLAGSALMMRSG 479 Query: 448 ----RTTMRILIGLLVQNPELAT-LVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQ 502 +++ +L+ +P L + + +++ + L L++ S P L Sbjct: 480 ASGLPPREALILLILISHPGLIEQHLEDIADIEFSGRDAGVLRDRLIDKVSSAP-LDPAG 538 Query: 503 LLEHYRGTNNAATLEKLSMW-----DDIADKNIAEQTFTDSLNHMFDSLLELR----QEE 553 + A L +L + +N AE + L + R Sbjct: 539 ARAFAQEEGFGAVLARLDAFAAHASHWYMKENAAEADADEVLKQALTLHHKERGLNKDLR 598 Query: 554 LIARERTHGLSNEERLELWTLNQEL 578 + +++ L + ++L Sbjct: 599 AAQQAFERDMTDVNLARLKAIREDL 623 >UniRef50_Q2JLC5 DNA primase n=3 Tax=Cyanobacteria RepID=Q2JLC5_SYNJB Length = 646 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 184/631 (29%), Positives = 297/631 (47%), Gaps = 52/631 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G P FI + + D+V+++ +V L+KQGKNF CPFHN+ PSF V+ KQ Y Sbjct: 1 MSGL-PPDFIQLVRQKADLVEVVAEKVVLRKQGKNFVGLCPFHNDHKPSFQVSPSKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS-----QIERHQRQT 115 CF CGA G+ + F+M + L F E V LA +++ +P + E R+ Sbjct: 60 CFSCGAGGDVLRFVMQTEHLSFAEAVRHLARRYHIPLPTRNPEAQPLGSLDERELSHREK 119 Query: 116 LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 L +++ FY+ +L+ + ++ARQYL R LS E + +F IGFAPPGW ++ + + Sbjct: 120 LLEILAMAADFYRHALRSQLGSAARQYLHSRHLSEETLQKFQIGFAPPGWQSLYEYLVNH 179 Query: 176 P-ENRQSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLN 232 + + L +AG+LV QG YDRFR R+M PI D +GRVIGF GR LG PKYLN Sbjct: 180 KRQPVKLLEEAGLLVPRQQGSGHYDRFRNRIMLPIFDVQGRVIGFAGRALGESGQPKYLN 239 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 SPET++F+K + +YGL A+ A+ +++LVVEGY DV+AL Q G+ YAVA++GT+ T Sbjct: 240 SPETELFNKSQVVYGLNFARDAIAKADQVLVVEGYFDVIALHQAGVAYAVAAMGTALTPH 299 Query: 293 HIQLLFRAT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTL 349 ++ L R T +I +D DRAG +AA RA+E G +LR + LP+G+D D Sbjct: 300 QVKTLLRYTQSKRLILNFDADRAGLNAASRAIEAIEEQARRGEIELRILTLPEGKDADEF 359 Query: 350 VRKEGKEA--------FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQ 401 +R+ A + +EQA + ++ DLS + + L++ Sbjct: 360 LREYKSSAPPTRAVAELQTLIEQAPLWLDWRIEQVLAGRDLSRATDFQQARQALVQLLAG 419 Query: 402 VPGETLRIYLRQELGNKL----GILDDSQLERLMPKAAESGVSRPVPQLKR------TTM 451 + G+ R ++ L G L E L + ++P + Sbjct: 420 LGGQ-WRSLYLHKVAELLSRGNGRLSRDLEEDLRRAVRQYRWAKPQQPSLNKGSKLLQSE 478 Query: 452 RILIGLLVQNPELATLVPPLE---NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY- 507 L+ + + E + L + P L++ ++ +QP L + Sbjct: 479 SHLLQIFLHFGEYRHEIRQTLLERELQFSFRPHRELWQRILELISAQPELEEQEETLLTA 538 Query: 508 ------RGTNNAATLEKLSMWDDIADKNIA--EQTFTDSLNHMFDSLLELRQE---ELIA 556 + L L D+ + ++ +M + + R +L Sbjct: 539 LRTLCAQDEQLNERLSHLLWLDENTRVALMRPRMVVRAAIANMELEIRQKRYRYWTQLWD 598 Query: 557 RERTHGLS------NEERLELWTLNQELAKK 581 + + G + + + Q L ++ Sbjct: 599 QAFSEGNTALAAQYQASIQQEYQAIQALQRQ 629 >UniRef50_P74893 DNA primase n=21 Tax=cellular organisms RepID=PRIM_SYNE7 Length = 694 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 169/547 (30%), Positives = 270/547 (49%), Gaps = 24/547 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + R DIVD++ +V LKK+GK+F CPFH++K+PSFTV+ KQFY+CF Sbjct: 5 RLHPETIAAVKERADIVDIVSEQVVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFS 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVP--FEAGSGPSQIERHQRQTLYQLMD 121 CGA GN I FLM K F E V +LA + + V Q + +R+ LY+++ Sbjct: 65 CGAGGNPIKFLMELGKQSFSEVVLDLAKRYQVPVRTLEVQQHQELQRQLSRRERLYEVLA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 FY+QSL++P +A YL + R L I +F +G+AP W ++ Sbjct: 125 VATQFYEQSLRRPEGAAALDYLRRSRQLQESTIQKFQLGYAPAQWASLATHLIEQKRFPA 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 + +AG++V G YDRFR+R+M PI D +GRV+GFGGR L + PKYLNSPET + Sbjct: 185 DLVEEAGLVVARRNGQGYYDRFRDRLMIPIHDLQGRVVGFGGRTLTGEEPKYLNSPETTL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ L+GL +A+ A+ ++ +VVEGY DV+AL GI++AVASLGT+ + ++LL Sbjct: 245 FEKGKLLFGLDKARAAIAKQDQAVVVEGYFDVIALHAAGIDHAVASLGTALSRQQVKLLS 304 Query: 299 RA--TNNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLVRKEGK 355 R +N ++ +D DRAG AA RA+ G QLR + LP G+D D +++ Sbjct: 305 RYSESNQIVLNFDADRAGAKAAERAIGEVEDLAYQGQVQLRVLNLPGGKDADEYLQRHSV 364 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 + + ++ + + L+ +L D + + L+ ++P LR + ++ Sbjct: 365 ADYRELLARSPLWLDWQIDQLLRDRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQV 424 Query: 416 GNKLGI-----------LDDSQLERLMPKAAESGVSRPVP-QLKRTTMRILIGLLVQNPE 463 +L +Q+ S +P ++ ++ + + P Sbjct: 425 AERLSQGEARTAVQLASDLRAQVRGQRWHGQASRWEKPGDVSIREQAEAQILKVYLHCPR 484 Query: 464 LATLVPPLE---NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLS 520 L V + L L + + + L + + RG N L + Sbjct: 485 LRLAVRKTLHDREIQGFSLQPHRLLWQAIAEI-EEAHLGFAAMYQVERGEGNGDDLAAID 543 Query: 521 MWDDIAD 527 + + D Sbjct: 544 LVPILRD 550 >UniRef50_B0U098 DNA primase n=21 Tax=Francisella RepID=B0U098_FRAP2 Length = 606 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 179/582 (30%), Positives = 293/582 (50%), Gaps = 9/582 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +I FI +L+A DI D++ V L K GKN+ ACCPFHNEKTPSF VN +K+F+H Sbjct: 1 MAKKISNNFIKELVANADIADVVSRYVNLTKSGKNYKACCPFHNEKTPSFFVNSQKRFFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC G+A+ F+ + L+FVE V+ LA + V +E S + + Sbjct: 61 CFGCHESGDALTFVKKINNLDFVEAVKTLAEIVGKPVEYENYSQEDLHKEQLFNKCIGFL 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +Y+ +L A YL+KRG+ ++ F IG++ GW+NV + + Sbjct: 121 AIAQKYYRWNLGNSASKEKAVGYLKKRGIDSDLAKVFGIGYSSEGWNNVTQLAKSVNVSE 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDI 238 LID G+ + ND+G YDRFR R+MFPIR+ +G VIG+GGRV+ + D KY+NSPET + Sbjct: 181 DILIDTGLAIKNDKGNVYDRFRNRIMFPIRNIQGNVIGYGGRVIDDSDGVKYINSPETIV 240 Query: 239 FHKGRQLYGLYEAQQDNAE-----PNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 F K LYGLYE ++ + L+VVEGYMDV+ LA+YG AVA+LGT+ + +H Sbjct: 241 FQKNNILYGLYEYREKKKQYPDLANQSLIVVEGYMDVIGLAKYGFYSAVATLGTAFSQNH 300 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 ++LFR +N+++ C+DGD AG+ A R ++ LP + ++LR + L G+DPD +++ Sbjct: 301 AKILFRESNSIVLCFDGDSAGQKAVVRTIKIILPILDGNKKLRILTLEHGKDPDDYIKEY 360 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 G + F ++++ + F+ N ++ D+S + ++ + + + L Sbjct: 361 GLDNFNNSLKKSQSVLDFIINYIINNKDVSKAECKSEIVENLKEFLIDIDENIYTESLIS 420 Query: 414 ELGNKLGILDDSQLERLM-PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLE 472 + K+ I + + L K + V+ + K R+ +L++ LA + + Sbjct: 421 TVAEKININANQIKKLLKLGKQRSNIVNLDIDNYKYRQKRLSKSMLLEEVILAEIFVNIA 480 Query: 473 NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + L + L + L E A L +L D + Sbjct: 481 DFRML-LKENDFEIFATSKNLDILVKSLKILKEDSSNEIEAVILIQLLAEDYPDYREYFF 539 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 + + +N + + I ++ +N + +L L Sbjct: 540 ELLSQGINKARKKSDGEQYCDQILKDLKRIEANSVKEQLNYL 581 >UniRef50_B3DW96 DNA primase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DW96_METI4 Length = 595 Score = 481 bits (1237), Expect = e-134, Method: Composition-based stats. Identities = 165/591 (27%), Positives = 286/591 (48%), Gaps = 22/591 (3%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + FI + DIV+++ V LK+ G F + PF EKTPSF V+ +KQ + CF G Sbjct: 7 KEFIEKVRQANDIVEVVSEYVVLKRAGSKFKSLSPFKKEKTPSFFVDPQKQLFKCFSSGY 66 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G DF+M Y+KL+F+ ++ LA L P Q+Q L++L + + + Sbjct: 67 GGTVFDFIMYYEKLDFIGALKHLARRAGLSFPSSFRYEEQNESLRQKQKLWELHEAVAEY 126 Query: 127 YQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 + + L +P AR YL++R + + F +G+A WD +L+ + L A Sbjct: 127 WTKILVDEPSGEPARAYLKERNIDLCIAKEFGLGYALNSWDGLLRWASTKKGLLEMLEPA 186 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQ 244 G+++ + + YDRFR R+MF I D+ G+V+GF GR++ + PKYLNSPE+ IF KG+ Sbjct: 187 GLVIRTEHSKIYDRFRGRLMFRITDEAGKVVGFSGRLIEGEQGPKYLNSPESPIFTKGKI 246 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYG ++A++ AE + ++ EG++D++ L G + AVA+ GT+ T LL R + V Sbjct: 247 LYGFHKAKRAIAETGKAILCEGHIDLIRLHAAGFSTAVATQGTALTEHQAGLLKRFCSEV 306 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 YDGDRAG +AA RA E L +G +++ LP GEDPD+L+ K+G+EAFE +E+ Sbjct: 307 FVAYDGDRAGEEAALRASEILL---AEGLEIKIAQLPPGEDPDSLISKKGREAFEKVLEE 363 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A+P +F+ N + G+++++ L+ ++ R E+ +LGI + Sbjct: 364 ALPYPSFVLNKACLEYSPQQAFGKSKIAEKMAGLLIKISDPVRRHTASLEVAARLGISLE 423 Query: 425 SQLERLMP----KAAESGVSRPVPQLKRTTMRIL-------IGLLVQNPELATLVPPLEN 473 +++ ++R Q K++ + + L++ P+ Sbjct: 424 IFEQKMAQLDTANKRPEELNRKEDQEKQSWGEKIPPVILESLWFLMEYPQFIAHFKETFP 483 Query: 474 L-DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + +P L L + +Q ++ LE + + + Sbjct: 484 AGVLSAMPAAELLIRLYDFEEAQKTVSISSFLETLSQEQKGIVVSFMFHPLQEKPEGYTP 543 Query: 533 QTFTDSLNH-MFDSLLELRQEELIARERTHGLSNEER----LELWTLNQEL 578 + L +F + E + + ++ LS +E E+ L ++L Sbjct: 544 EEHCRILQEGLFLLWRQKCLERIKLQSQSGILSGQEISAKLKEIVDLARKL 594 >UniRef50_Q3Z903 DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 Length = 590 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 168/586 (28%), Positives = 273/586 (46%), Gaps = 31/586 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG-CG 65 + ++ + DIV I KL K G+ CPFH+EK SF V E Q +HCFG C Sbjct: 2 NDAVEEIKQKLDIVSFIGQYTKLTKAGRTMRGICPFHSEKHGSFFVYPEAQNWHCFGACN 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+M + L+F +E LA + +P + R QR+ LY++ Sbjct: 62 TGGDIFAFVMKKEGLDFKGALELLAEKAGVSLPSQINP----QIRDQRERLYEINLAAAQ 117 Query: 126 FYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +Y L P A SAR YL+ RGL+ + +A F +G+A P W + + L+ Sbjct: 118 YYHNLLLNSPQAESARSYLKSRGLNEQSLADFQLGYALPEWQGLYDYLKERSYTDEDLLK 177 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG++V +D+GR +DRFR +++PI + +G++ GFG RV+ N PKY NSP+TD+F+K Sbjct: 178 AGVIVRSDEGRIHDRFRNNIIYPIANYKGQIAGFGARVMDNSQPKYRNSPQTDLFNKSSL 237 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL+ A E N+ ++VEGYMD + Q G VA +GT+ T I L+ R T ++ Sbjct: 238 LYGLHLASASIREKNQAIIVEGYMDAIMSHQGGFTNTVACMGTALTDRQIALVKRQTKHL 297 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 I D D AG +A RA++ + ++R G+DPD ++R + ++ ++ Sbjct: 298 ILGLDADSAGEEATLRAIDYENQIES---EIRVAVPEGGKDPDEIIR-HAPQTWQEILDN 353 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 A PL ++F +DLS+ G+A L+ LP+IS++ + + +L + + Sbjct: 354 ARPLLDYIFEHSQKGLDLSSAAGKAGLTDRLLPIISKMEDGVRQSHYLGKLAEMVSTSQN 413 Query: 425 SQLERLMPKAAESGVSRPVPQLKRT----------TMRILIGLLVQNPELATLVPPLENL 474 LER+ E+ +++ + + + + LL ++PEL+ L Sbjct: 414 RILERMKKLKNETRITKVLEKEAPSKTVSAAKNPALEEYALSLLFKSPELSRFAGKL--- 470 Query: 475 DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT 534 + + +REL+ L N + L + D E Sbjct: 471 -HPEYLEIPQYRELLAVYSQSAEKDN---LRAALDENLREYYDNLMNKNPAND--NIEDK 524 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 F D + + L +L +S E E TLN + K Sbjct: 525 FYDLCLRLRERYLRNLAVKLNQALNE--ISQPETAEYQTLNDQCVK 568 >UniRef50_A6NVX2 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NVX2_9BACE Length = 596 Score = 480 bits (1236), Expect = e-134, Method: Composition-based stats. Identities = 162/578 (28%), Positives = 258/578 (44%), Gaps = 44/578 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 IP FI++L+AR++I D++ + V L K+G N CPFHNEKTPSF+VN +KQ YHCFGC Sbjct: 3 IPEQFIDELVARSEISDVVSSYVTLNKKGSNLWGLCPFHNEKTPSFSVNQDKQIYHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G I F+M + L F + V LA LEVP R +R + Sbjct: 63 GKGGGVISFIMEIENLSFPDAVRFLAKRAGLEVPDTGSDDAG---RKKRARALEANKDAA 119 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY L+ P R+Y+ +R +S RF +G AP WD + K ++ LID Sbjct: 120 RFYHDYLKGPGGARVREYIAQRQISPRTATRFGLGAAPDQWDALTKALTAKGYSKMELID 179 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIFHKGR 243 AG+ V G YD+FR R+M P+ D RG V GF R+L G + KYLN+PET +F KGR Sbjct: 180 AGLAVAGKNGGIYDKFRARLMLPVIDVRGDVAGFTSRILPGEEGAKYLNTPETVVFKKGR 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 +Y L A+ N + L++VEG +DV+ L Q G + VA++GT+ T +H ++L R T Sbjct: 240 LIYALNFAK--NTKRPNLILVEGNIDVITLHQAGFDNVVATMGTALTEEHARILARYTKE 297 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD---------GEDPDTLVRKEG 354 ++ CYD D AG+ + R L +R + LP+ +DPD +++ G Sbjct: 298 LVLCYDNDPAGKKSTDRVLGIL---KNADLNVRVLQLPNAYDSEGNPLKQDPDDFIKRFG 354 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL--- 411 AFE + + + + SL+ + L+ +GR A+ ++ + R Sbjct: 355 AAAFEKCLNGSAGQNDYRLESLLQKHSLADEEGRMAFLREAVETVASLQSPIEREIYGNK 414 Query: 412 ------------RQELGN-KLGILDDSQLERLMPKAAESGVSRPVPQLKR-------TTM 451 QE+ + ++ ++ + +P + R Sbjct: 415 AAAAGGISAAAFAQEVERYRKNRAWQAKKKQTRKDLTPAAQLQPRERELRYENIRSARAE 474 Query: 452 RILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 ++ L++ P L LE + ++ L L Sbjct: 475 EGVLRLMLLEPGLFQSAGALEPEQFSSPLLGRVYGMLRTRWQEGRSTQLPALTGELTADE 534 Query: 512 NAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 + + L + +A +++ D + + + Sbjct: 535 MSHLVHVLDQPESLAH---SQKALADYIEIIATEYAKR 569 >UniRef50_C9LIA0 DNA primase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LIA0_9BACT Length = 644 Score = 480 bits (1235), Expect = e-134, Method: Composition-based stats. Identities = 166/586 (28%), Positives = 263/586 (44%), Gaps = 35/586 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I ++ DIVD++ V L+K G N CPFHNEKTPSF V+ KQ CFG Sbjct: 1 MIDRQTIQRVMDAADIVDVVKDYVTLRKAGVNLKGLCPFHNEKTPSFVVSPTKQLCKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GNA+ FLM ++L + E ++ LA + +EV + S Q R+++ L + Sbjct: 61 CGKGGNAVHFLMEIEQLTYPEAIKTLAKKYGIEVKEKELSAEEQKSISMRESMLVLNEWA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 +++ L + YL +RGL ++I +F +G++ P D + + ++ Sbjct: 121 CSYFSNLLHESKDGQTIGLSYLRQRGLRDDIIKKFHLGYSSPSRDALAQTALNKGYSKDL 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L+ G+ D + DR+ +R++FPI GRVIGFGGR++ + KY+NSPE+ I+ Sbjct: 181 LVQTGLCFETDNHQLRDRYHDRIIFPIHSVSGRVIGFGGRIMQQNKNVGKYINSPESVIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R+LYGLY A++ + + +VEGYMDV+A+ Q GI VAS GTS T I+LL R Sbjct: 241 DKSRELYGLYFAKKAIVKEDACYLVEGYMDVIAMHQSGIENVVASSGTSLTEGQIRLLHR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T+N++ YDGD AG A+ R ++ L +G ++ + LP+GEDPD+ RK E F Sbjct: 301 FTSNIVVLYDGDAAGIHASLRGIDLLLK---EGLNIKVLTLPNGEDPDSFARKHSAETFR 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + +A+ F L+ + P R+ + + I+ VP R +E Sbjct: 358 AYLQAEAVDFIRFKAAMLIKET-ADDPIKRSESVSDIIRSIAIVPNGITRQTYARECAKL 416 Query: 419 LGILDDSQLERLMPKAAESGVS---RPVPQLKRTTMRILIGLLVQNPELATLVPPLENLD 475 + I + L E + RP I + L Sbjct: 417 MDIDEQLILSEAAKFRKEERIKGADRPQNNAGNPQKTTSIAESI----------NTLTLK 466 Query: 476 ENKLPGLGLFRELV-------NTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK 528 + L RE++ ++ A + KL Sbjct: 467 AGEEQERALIREIICVGEQKLRFANKHGETKEKSIITFIAEDLAADNI-KLQNPLHQKII 525 Query: 529 NIAEQTFT--DSLNH-MFDSLLELRQEELIARE--RTHGLSNEERL 569 + A++ D + F + + L + + L+ E Sbjct: 526 DEAQKEVEQKDFVARDYFINHPDADINALAMQLTTASEKLTKAEIE 571 >UniRef50_Q1WTP2 DNA primase n=3 Tax=Lactobacillus RepID=Q1WTP2_LACS1 Length = 617 Score = 479 bits (1234), Expect = e-134, Method: Composition-based stats. Identities = 158/606 (26%), Positives = 262/606 (43%), Gaps = 32/606 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA IP I++L + +I+D+I V+L K GKN+ CPFH+EKTPSF+VN +KQ +H Sbjct: 1 MARLIPEATIDELRSNVNILDVISQYVQLHKSGKNWFGICPFHSEKTPSFSVNEQKQIFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF C GN F+M + L F E+V+ +A + N ++ + +Q E + + +L Sbjct: 61 CFSCHRGGNVFKFIMELEGLSFPESVQRVAELANYDLGISIDNSENQNETSENGKIRKLY 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 Y L + A +YL KRG++ ++I F IGFAP + Sbjct: 121 KETTKLYHHILVNTVLGEPALEYLHKRGINDDLIEEFEIGFAPENNILEAFFKEQKLYDY 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETD 237 Q L +G+ + +RF RVMFPIRD G+ I + GR+L +D PKYLNSPET Sbjct: 181 QILRKSGLFIERQSTELVERFNGRVMFPIRDTSGQTIAYSGRLLEKRDDAPKYLNSPETA 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IF+K + L+ +A+ ++ EG+MDV+A + GI +AS+GTS T + I L Sbjct: 241 IFNKRKVLFNFDKAKGIIRREKEAILFEGFMDVIAAYRSGIKNGIASMGTSLTDEQIYAL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T++++ CYDGD AG++A RALE P L + +P+ DPD +K G E Sbjct: 301 DRVTSHLVICYDGDNAGQNATKRALEIIEPTGK--FSLEVIKIPEKLDPDEFTKKYGSEK 358 Query: 358 FEARMEQ-AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F F + +L+ + + L I++V + L Sbjct: 359 FVELARNDRKSPLEFYLSYYEQDKNLNNENNQLEYIRDILQEIAKVRDPLEQDLYLNRLA 418 Query: 417 NKLGILDD---SQLERLMPKAAESGVSRPVPQLKRT---------------------TMR 452 + + + SQL+++ K + Q + R Sbjct: 419 QRFNVAKENLDSQLKQIREKIFAQRAEKQEEQSYQAQQIPRTVIQKNEVQHFSKAEKAER 478 Query: 453 ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNN 512 +L+ ++ + + + + + + ++ L+ Sbjct: 479 LLLYRMLHDKNVWLRINGIPDFNFIHENYQVIYNLSEAYFDIHDEYEVADFLDFINEDGL 538 Query: 513 AATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELW 572 + L M D ++EQ D L+ + + + + E + ++ Sbjct: 539 RQVVVTLEMGD--YADEVSEQEINDCLSLIMSQTPLEDKIKKVQTEMLEAKRQNDTAKIT 596 Query: 573 TLNQEL 578 L +L Sbjct: 597 KLTMDL 602 >UniRef50_Q11WL0 DNA primase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11WL0_CYTH3 Length = 653 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 166/582 (28%), Positives = 263/582 (45%), Gaps = 25/582 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ + I+ + D+V++I V LK++G + CCPFHNEKTPSFTV K Y CFG Sbjct: 2 RLTKDTIDQIQQSIDVVEVISDFVSLKRKGHYYSGCCPFHNEKTPSFTVTPAKGIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+AI F+M ++ +VE + +A +N+E+ E S E+ ++ ++ + + Sbjct: 62 CGKGGDAIQFIMEHEGASYVEAMAYMAKKYNIEIKEEELSEEQNFEQSEKDSMLVVTNYA 121 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + +Y L Y ++RG E I +F +G++ WD K + Sbjct: 122 SQYYTDQLWNSEDGKSIGLSYFKERGFREETIKKFELGYSHDQWDGFTKNAIEKGYKTEF 181 Query: 182 LIDAGMLVTNDQ------GRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNS 233 L G+ + D + +DRFR RVMFPI + GRV FG R+L KYLNS Sbjct: 182 LTKTGLSIERDNANENSEKKFFDRFRGRVMFPIHNVAGRVTAFGARILKADKTQAKYLNS 241 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 E+ I+HK + LYGL++A+Q + L+VEGY DV++L Q G+ VAS GTS T D Sbjct: 242 IESVIYHKSKILYGLFQAKQAIRKEEECLLVEGYTDVISLHQSGVENVVASSGTSLTEDQ 301 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 I+L+ R T N+ YDGD AG A+ R ++ L + + P GEDPD+ V+K Sbjct: 302 IKLVKRYTPNITILYDGDAAGLKASLRGVDLILQ---QDMNVSIVVFPQGEDPDSYVQKI 358 Query: 354 GKEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G AF+ ++ +F + ++ + P RA + + IS+VP R Sbjct: 359 GPTAFKDYIKSNKKDFISFKTEISLKEIG-NDPIKRAEVIKDIVESISKVPDAIKRSVFF 417 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELA---TLVP 469 +E L I + + KA + G K R + L P++ +V Sbjct: 418 RECSKLLEIDEQILISEYNKKAIQKGNQ---EAKKWEEDRHALAELQAIPDIELPDDIVR 474 Query: 470 PLENLDENKLPGLGLFRELVNTCL---SQPGLTTGQLLEHYRGTNNAA-TLEKLSMWDDI 525 + KL + R L+N Q + L+ + + + Sbjct: 475 LSIEEESLKLHERDMMRYLINYASSPMEQEMPLSDYLIHELQDVEFKNPAYDYIIKKIID 534 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 N TD L + +L++ + + E+ Sbjct: 535 TRLNGNTVLHTDFLQQDQPQYVRDAAIDLLSTKFQLSDNWEK 576 >UniRef50_C9MA31 DNA primase n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9MA31_9BACT Length = 578 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 178/591 (30%), Positives = 285/591 (48%), Gaps = 35/591 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + ++ + A D+V++I V+L K+G+N+ CPFH+EKTPSF V+ E+Q +HCFGC Sbjct: 1 MSDPIVDQIKAALDVVEVIGESVRLTKKGRNYTGLCPFHDEKTPSFMVSQERQSWHCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G+ F+M D L F E +E LAA +++P + S+ L+ LM+ Sbjct: 61 GKGGDLFSFVMLKDGLSFPEALEYLAARAGIDLPRQGRRQVSKD-------LFALMEEAV 113 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +FY+Q L+ P +AR YLE+R +S E A F +G+AP W ++ + + SL+ Sbjct: 114 SFYRQELRGPGGAAARAYLERRNVSPEAAAAFELGWAPNAWQSLSDQLKRGGASEASLLK 173 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+++ ++G YDRFR RV+FPIR+ RV+ GGR++ + KYLNSPE +++ K Sbjct: 174 AGLVIQGNRGNCYDRFRGRVIFPIRNVPSRVVALGGRLIDGEGAKYLNSPEGELYSKKNN 233 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LY L A++ E R ++VEGYMD + L G VASLGT+ T + LL R + Sbjct: 234 LYLLDRAKESIREKGRSILVEGYMDALRLHLCGWAEGVASLGTALTEEQAALLRRFADKC 293 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK-EGKEAFEARME 363 CYD D AG+ A R + ++G + + LP+G+DPD L++ G E+F ++ Sbjct: 294 YICYDSDLAGQTATLRGMYLL---ASEGLTVYVVTLPEGKDPDELLQMPGGPESFTKALD 350 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A+PL + Q + DG + S L +S + L + R EL LG+ D Sbjct: 351 GALPLVSHHIKLFRAQAE---QDGVTKASRDLLESLSALSSLDLSPH-RAELCQALGLTD 406 Query: 424 DSQLERLMP-------------KAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 + L AA + ++ + + LL L Sbjct: 407 YQLRQELERFRRPVRADVKRSETAAPQSKTSQRDKMFHESEACMTYLLWSQKGLRGGREA 466 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD--K 528 L+ + P L +++ LS G+L + A E L+ + Sbjct: 467 LQVPRLLETP---LLQDIAAALLSGS--DPGELESRWLQLGETAQKEALTEGEYSISRFG 521 Query: 529 NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + AE+ + L+ + E R L + + EE + +L++EL Sbjct: 522 STAEEQWNVLLSALLRRATERRYAALKEKILRGEATEEEVAQWGSLSRELK 572 >UniRef50_C2KWR8 Possible DNA primase n=1 Tax=Oribacterium sinus F0268 RepID=C2KWR8_9FIRM Length = 581 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 171/587 (29%), Positives = 260/587 (44%), Gaps = 32/587 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + ++ RTDIVDLI V LKK+G ++ CPFH EKTPSF+V+ KQ ++CFGCG Sbjct: 5 EEIVEEIRQRTDIVDLIGQYVHLKKKGSSYFGLCPFHGEKTPSFSVSPGKQIFYCFGCGK 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G++I F+M Y+ L FVE +E+LA N+ +P E SG ++ E R L ++ F Sbjct: 65 AGDSIRFMMEYENLSFVEAIEQLAERANVTLP-EKSSGVNKGEEDLRYKLLEINKNAALF 123 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 + + L+ P QYL KR LS E I F +G+A D + + L ++G Sbjct: 124 FVKQLRSPKGKLGLQYLAKRALSGESITHFGLGYAVQEKDALYQHCKALGYEDAILQESG 183 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLY 246 + + G D+F RV+FPI D RVIGFGGRV+G+ PKYLNSPET +F K R L+ Sbjct: 184 LFTFKENG-VRDKFFNRVIFPIMDLHHRVIGFGGRVMGDGEPKYLNSPETKLFDKSRNLF 242 Query: 247 GLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVIC 306 L A++ + L++ EGYMDV+++ Q G AVA+LGT+ T LL R T+ V+ Sbjct: 243 ALNFARRS--RESYLILCEGYMDVISMHQAGCIEAVAALGTAFTEQQAALLKRFTSTVLL 300 Query: 307 CYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAM 366 C+D D AGR A RA+ Q + + L +DPD ++ EGK+A R+ A Sbjct: 301 CFDSDNAGRKACKRAIPIL---REKEIQAKVISLKPYKDPDEFLKAEGKDALMERIHNAK 357 Query: 367 PLSAFLFNSLMPQVDLSTPDGRARLSTLALPLIS-QVPGETLRIYLRQELGNKLGIL--- 422 + L +L P L+ + + + + Sbjct: 358 NAFLWEVEELKSGFNLQDPGEMQGYMEAIASLLRDCFSDPVELENYCKAVAREQLLSAEN 417 Query: 423 ---------DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 + SQL + K ++ L + LL+Q E V Sbjct: 418 LLYLVQKGEEKSQLSFALSKQGRREENKREKALTDNLEEQFLSLLLQKEEWIAPVSQYIK 477 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 ++ + Q G + ++++ + G D+ ++ Q Sbjct: 478 AEDLREELCRQV-----FLSLQEGKSVQEIMDGFLGEEEKYQKCMALYHGDLYHLDLERQ 532 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 L + E+ I+ EL L +E K Sbjct: 533 EEERMLLDFIRQMKLRGIEKAISEAMDG-------EELSRLFREKDK 572 >UniRef50_C3RLQ3 DNA primase n=3 Tax=Bacteria RepID=C3RLQ3_9MOLU Length = 584 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 154/591 (26%), Positives = 282/591 (47%), Gaps = 23/591 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ IN++ DIVD+I + L+K+G+N+ A CPFH++ PS +++ E+Q + CF Sbjct: 3 RLSSEKINEIRQSVDIVDVIGTYLPLEKKGRNYVAICPFHDDSHPSMSISPERQIFMCFV 62 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C GN FL +Y K+ ++E V+ +A + N+++ + + + LY++ D Sbjct: 63 CHHGGNVFTFLKDYLKIPYIEAVKMVANIGNVDISKYNLESRVKPVDQKLEPLYRMHDEA 122 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 N Y L +A A++YL R ++ E+I F IG+AP +LK F N+ S+ Sbjct: 123 NKIYNHYLNTKLAIQAKEYLNNRKITDEIIETFEIGYAPNN-HVLLKAFEKMNFNKVSMF 181 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFHK 241 ++G+++ G YDRF +R+MFP+ D GRV+GF GR+ + KY+NSPE+ IF K Sbjct: 182 ESGLIIEASNG--YDRFTDRIMFPLHDASGRVVGFSGRIYKQSQNESKYMNSPESSIFIK 239 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY + ++ + +++ EG+MDV+AL + GI AVA +GT+ T H+ LL R + Sbjct: 240 GDTLYNYHRVGEEARQAGYIIITEGFMDVIALYKAGIKNAVAIMGTALTHGHLNLLKRLS 299 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 V C DGD+AGR+A ++++ L + G ++ + LPD DPD ++ K G E A Sbjct: 300 KTVYLCLDGDQAGRNATIKSIDILL---SAGFIVKVVDLPDNLDPDEILDKRGIEELNAV 356 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 +++ + F N ++ + R IS++ + + Q+L K G Sbjct: 357 IKRPLSSLDFKMNYYYEMTNMDNYEDRKSYLETIAREISRLDDIIDQDHYIQQLEKKSGF 416 Query: 422 LD---DSQLERLMPKAAESGVSRPVPQLKRT--------TMRILIGLLVQNPELATLVPP 470 D + + E+ +P+ + R L+ ++ + +A + Sbjct: 417 SRNIIDQLINQNTAVRIETAEPPKIPKFQNQRLLDKYIRAERDLLYYMMNDKNVAMMYEA 476 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 N + + +++ + L L+ N + ++S K Sbjct: 477 KAGFMFNDI-YRIIASYIIDYYRQEVVLEVADLISSIEDENLVQNIIEISQLG--LPKLK 533 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + D + + + + +++EEL + +++ ++ L K Sbjct: 534 DTKAIDDYIETIKEKTVMVKKEEL-TKALADTFDPKQKAQILKEIIALKDK 583 >UniRef50_C7Q583 DNA primase n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q583_CATAD Length = 700 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 157/455 (34%), Positives = 229/455 (50%), Gaps = 15/455 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHAC-CPFHNEKTPSFTVNGEKQFY 59 MAG+I I+ + IVD++ A V+L+ G CPFH+EK+PSF V+ K FY Sbjct: 1 MAGQIKDEDIDRVRQAASIVDVVGAVVQLRNGGGGNLKGLCPFHDEKSPSFQVSPAKNFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ + F+M YD L F E VE LA +N+E+ + G +Q R +R L + Sbjct: 61 HCFGCGVGGDVLKFVMEYDHLSFPEAVERLAGQYNIELRYTEGGYTNQGVRSERTRLIEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++ L P A AR+ L RG I +F +GFAP W+++++ G Sbjct: 121 HKAAAEYFVDQLSTPAAAHARELLAARGFDAGAIEQFHVGFAPESWESLVRHLRGRGFTD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETD 237 + ++ G+ +G DRFR R+M+PI D G VIGFGGR L + DTPKYLNSPET Sbjct: 181 KEILTGGLASEGRRGAM-DRFRNRLMWPIADLSGDVIGFGGRRLTDDPDTPKYLNSPETP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+ K LYGL A+++ + R +VVEGY DV+A G+ AVA+ GT+ +HI++L Sbjct: 240 IYKKSSVLYGLEMARREIVKQERAVVVEGYTDVMACHLAGVPTAVATCGTAFGEEHIKIL 299 Query: 298 FR--------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 R V+ +DGD AG+ AA RA L Q P G DP L Sbjct: 300 RRLLADRNQFLGVEVVFTFDGDSAGQKAAMRAY---LDEDKFVTQTFVAVEPSGMDPCDL 356 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 +G A + L F+ + + + +L +GR P+++++ LR Sbjct: 357 RLAKGDAAVRELVATRTRLFEFVIRAELAKQNLDESEGRVHALRTTAPIVAKIRDSALRN 416 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRPVP 444 + L LG+ + + A SG+ V Sbjct: 417 DYTRRLAGWLGLEERDVQSAVRRLLAASGIRPEVS 451 >UniRef50_B9YB47 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YB47_9FIRM Length = 589 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 149/588 (25%), Positives = 267/588 (45%), Gaps = 22/588 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + DI ++I V L K+G++ CPFH++ PS +++ +KQ Y CF Sbjct: 2 RLSDEEITAVRNSADIAEVIGHYVPLVKKGRSMACVCPFHDDHDPSLSISQDKQIYKCFV 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GN F+ NY+K+ F E V ++A + ++ F+ + + ++ ++ LY+++ Sbjct: 62 CGAGGNVFTFVQNYEKVSFPEAVAKVAEISGYKLSFDPSAFKTPVD-PRKDALYKVLAET 120 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 + L T R+YL RG+ I +F IG+ PG D +L+ N Q ++ Sbjct: 121 IRYTHYQLGAQAGTPVREYLANRGIDEATIEKFEIGWNGPG-DELLRFLQAKGYNEQDMV 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPETDIFHKG 242 A ++ N+ G +D F R+ FPI D G IGF R + + KY+N+ ETD++ KG Sbjct: 180 AANVVRLNESG-LHDVFASRITFPIHDSLGNPIGFTARSMDPEAQSKYINTTETDVYVKG 238 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 ++ + A+Q + + R+L+ EG DV+A ++ G++ VA+LGT+ T + ++LL + + Sbjct: 239 HTVFNYHRAKQPSRQEGRVLLCEGVTDVLAFSRAGMDNVVATLGTACTKEQLRLLRQCSL 298 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 ++ CYDGD+AG++A ++A + A G ++ + P G DPD ++R+ G E A + Sbjct: 299 HLTFCYDGDKAGQNATYKAAKLA---REAGFEVGIVSNPTGLDPDEILRQHGAEELRAMV 355 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + + F+F L + DL + + I Q+ E R +L G Sbjct: 356 RKELTWMEFVFQYLSTRYDLENYSEKKEFTLKVEDEIKQLSDEFDRQNFAHQLEQLTGFH 415 Query: 423 DDSQLERLMPKAAESGVSR---------PVPQLKRTTMRILIGLLVQNPELATLVPPLEN 473 D PK SG R P K +++ L++ E + Sbjct: 416 LD-LGAAPAPKPDNSGAGRVKTVPIRLNPSRDGKTNAEHLILALMLTRREAVEMFKEKLG 474 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 L +++ S P L + + LS W+ + Sbjct: 475 F-LLNEENQQLAMMILDYSRSHPQLQIADFISTIDEETLRQKVLDLSEWEC---PQFTPE 530 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++ + +LE R +L + + E + L +L ++ Sbjct: 531 VMDGAIRRLQRCMLEERINDLKQQILRIS-NPESQAALLNERMQLQRE 577 >UniRef50_Q1IIK3 DNA primase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIK3_ACIBL Length = 640 Score = 477 bits (1229), Expect = e-133, Method: Composition-based stats. Identities = 168/619 (27%), Positives = 274/619 (44%), Gaps = 50/619 (8%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 P F DL + DIV +I V+L+K G N+ CPFHNEK+PSF+V+ +QF+HCFGC Sbjct: 21 PGDFAYDLKQQADIVRVIGEYVQLRKAGAQNYAGLCPFHNEKSPSFSVHQSRQFFHCFGC 80 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF-EAGSGPSQIERHQRQTLYQLMDGL 123 GA G+ F+ + + F E V +A + +P E S E R L + Sbjct: 81 GASGDVFTFIQKIENITFPEAVRSIAQKLGVPMPKVEYASPQEAREAKMRGALLDANELA 140 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++Q+ L++P A AR+YL+ RGL E + +F IGFAP + R G N + L Sbjct: 141 CAWFQEQLRKPDAAHAREYLKSRGLDAETVEKFRIGFAPESGFLLRDRMKGE-FNEEILR 199 Query: 184 DAGMLVTNDQ------------GRSYDRFRERVMFPIRDKRGRVIGFGGRVL---GNDTP 228 ++G+ + Y +FR R+MFPIR+++G+VI F GR L P Sbjct: 200 ESGLFSWKEDATRDSESAKSAPSALYAKFRNRIMFPIRNEQGKVIAFTGRTLATDEKSGP 259 Query: 229 KYLNSPETDIFHKGRQLYGLYEAQQDNAEPN------RLLVVEGYMDVVALAQYGINYAV 282 KYLNSPET I+ K R L+ L A++ ++VEG MD ++L + ++ + Sbjct: 260 KYLNSPETAIYSKSRVLFNLNLAKEAIRGSKDAPGLGYAILVEGQMDCISLYREDVHNVI 319 Query: 283 ASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD 342 A+ GT+ T +LL R T V+ +D D AG AA R+L +++ Q+R + L Sbjct: 320 ATSGTAFTEFQAKLLGRFTKQVVVNFDPDTAGAAAAERSLALL---VSEDFQIRVLTLEP 376 Query: 343 GEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQV 402 G DPD +RK+G+EA+ ++ + +L + Q TP+G+ + LP I ++ Sbjct: 377 GFDPDLYIRKKGREAYAYALKHSQKYFDYLIDRARKQYPTGTPEGKLKAVNYLLPHIQRL 436 Query: 403 PGETLRIYLRQELGNKLGILDDSQLERLM---PKAAESGVSRPVPQLKRTTMRILIGLLV 459 + +R + ++ +KL I E L + V ++LI L Sbjct: 437 SSKLVRDEIAMDIAHKLQIDSTVLKEELRHVAGSRTATSVKASAAPQITPIEKMLIRALA 496 Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNN------- 512 + +LA + ++ GL T +L+ Sbjct: 497 SSNQLAKDPVSSREGQDLDFEAARQVHYVLANETLHAGLQTERLIAALLKAVEDGSDPMT 556 Query: 513 ----AATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL---IARERTHGLSN 565 L+ + + + + + ++ R+ +L I G S Sbjct: 557 LPLGEGDRRTLATILMGDTETLTPEAMEGAFASLRLRRMKARRSDLVVEITAAERKGDSA 616 Query: 566 E------ERLELWTLNQEL 578 E+++L +EL Sbjct: 617 ALGRLSLEKMQLDREIREL 635 >UniRef50_Q2S8V4 DNA primase (Bacterial type) n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S8V4_HAHCH Length = 600 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 197/598 (32%), Positives = 307/598 (51%), Gaps = 29/598 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQ--F 58 MA IP+ F++DLL+R D+ LI RV LKK G + CPFH+EK+PSF V E Sbjct: 1 MASLIPQAFVDDLLSRVDLASLIAERVNLKKSGATYQGRCPFHDEKSPSFHVYNENHPAH 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHC+GCGAHG+AI+F+ + L F E VE+LA +EVP + ++ + Q ++LY Sbjct: 61 YHCYGCGAHGDAINFIKETEHLSFNEAVEQLAKRCGVEVPRDK---VAEQKVSQNKSLYD 117 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 ++ ++Q+L P A++YL++RG+S E+ + IGFAP + + Sbjct: 118 ASSHADSAFRQALGNHPQRGVAQEYLKRRGISPEMADLYGIGFAPAQRQFLSG--TSDRS 175 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETD 237 ++L +++ +Q R +D F+ R+MFPIRD RGR I FGGR LGND KY+NSPE+ Sbjct: 176 LVKALSTLRLVIEKEQDR-FDMFQNRLMFPIRDTRGRTIAFGGRTLGNDRSKYINSPESP 234 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 IFHK LYGL+EA++ + + +L+VVEGY+DV++LAQ+G+ AVA++GT+T D++ L Sbjct: 235 IFHKSNVLYGLWEARKQSRKLEQLIVVEGYLDVISLAQFGVVNAVAAMGTATNEDNLSHL 294 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + +++ C+DGD+AG AA +AL LP DG ++ F+ LP+GEDPDT VR EG +A Sbjct: 295 LNTSQDIVFCFDGDKAGLAAADKALNNLLPMFQDGYKVSFLILPEGEDPDTFVRNEGADA 354 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F R+ A PLS + F ++ +DLS + + LST A + + L+ L Q L Sbjct: 355 FRERIANATPLSEYFFQAMSRGLDLSIAENKGILSTQARAALKVINAPVLKDALYQRLNE 414 Query: 418 KLGILD----------------DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQN 461 + + + P+P R R +GL V+ Sbjct: 415 LTRSSRWGDRQGKHGGDWKKGDWKGKKGFSFQNRDEPREEPIPVPNRIAARACLGLYVK- 473 Query: 462 PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEK--L 519 P A + N + + L + L + + LL + K Sbjct: 474 PSWAKEISNTLNYEITQDDERAL-TYFLEWLLKEKIESAEDLLYRLTVDPHQQRRFKNLF 532 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE 577 + + I E +SL + + +++ + E + T++ E Sbjct: 533 NSLEHIFGTEEIEAGAQESLLVLKRKYFDRSFDKIHQDLSRDPKNKELHEKFRTMSSE 590 >UniRef50_C4F851 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F851_9ACTN Length = 663 Score = 477 bits (1227), Expect = e-133, Method: Composition-based stats. Identities = 154/453 (33%), Positives = 232/453 (51%), Gaps = 11/453 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCF 62 I N + TD+V L+ V+L+ +G + CCPFH EKTPSF V Q +HCF Sbjct: 1 MISEDDKNKVRDATDLVALVSETVELRPRGNTDLWGCCPFHGEKTPSFHVIPATQVWHCF 60 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+A ++M + L F E++ LA +E+ + + +R L ++ + Sbjct: 61 GCGEGGDAFTYVMKREGLSFPESIRYLADRAGIELEEDHSF---KRSGTKRNRLVEVCEE 117 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 +FY L + R Y ++R L E ++ +GFAP G +++ G Q + Sbjct: 118 TCSFYHTLLMRGKDARGRDYCKERELDAETCRKYRLGFAP-GHGMLVRHLGSKGFTPQEM 176 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFH 240 IDA + + G DRF +RVMFPI D++GR I FGGR L + KYLNS ET IFH Sbjct: 177 IDANVAFRSRGGGLVDRFFDRVMFPIFDEQGRCIAFGGRALDKEKTNAKYLNSSETPIFH 236 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 KG+ LYG A+ N +VVEGY+ ++ + GI VA LGT+ T +H++ L R Sbjct: 237 KGKNLYGFNWAKDHIVNNNEAIVVEGYISAMSCWKAGIENIVAVLGTALTENHVKTLMRF 296 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T ++ +DGD AG+ AA RA++ D LR + LP+G+DPD VR G EA Sbjct: 297 TKKIVYMFDGDAAGQKAARRAVQFI---EKDDLDLRCVILPNGQDPDDFVRANGGEALRE 353 Query: 361 RMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLG 420 ++ ++PL F+F L + D+STP GRA+ AL LI + + ++ ++LG Sbjct: 354 LLDNSIPLMDFVFGKLEEESDISTPGGRAKAMRSALELIYPLRASYMIDSYYMQIADRLG 413 Query: 421 ILDDSQLERLMPKAAE-SGVSRPVPQLKRTTMR 452 + D+ E + ++ R Sbjct: 414 LDVDTIRASAGKVFREVQQREETARRREKQRER 446 >UniRef50_Q2NAR5 DNA primase n=5 Tax=Sphingomonadales RepID=Q2NAR5_ERYLH Length = 625 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 182/603 (30%), Positives = 286/603 (47%), Gaps = 42/603 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + ++++L AR + +I KL++ G+ + ACCPFHNEKTPSFTV+ EK FYHCFG Sbjct: 1 MLSPQWLDELRARVTLSSVIMRTTKLQRAGREWKACCPFHNEKTPSFTVSDEKGFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGAHG+ I ++ + L+F++ V+ELA LEVP A + + +R +L + + Sbjct: 61 CGAHGDVIRWMTDQRGLQFMDAVKELAQEAGLEVP--APDPRAAQQAEKRASLIDVTEAS 118 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 ++ + L+ AR YL RG S+ VI F G+AP + G L+ Sbjct: 119 QRWFVEQLRGAEGARARDYLASRGFSNGVIREFGFGYAPDSKQAMG---SGVGFEDAMLV 175 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHK 241 ++GM + + G YDRFR+R+M PI+D RGRVI FGGR+L + KYLNSP+T +F K Sbjct: 176 ESGMRIETEDGSKYDRFRDRLMLPIQDARGRVIAFGGRILDKRDGVAKYLNSPDTPLFDK 235 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 GR LY L+ A + + R++VVEGYMDV+ALA GI AVA LGT+ T I++L+R Sbjct: 236 GRTLYNLHRAGPASRQTGRIVVVEGYMDVIALANAGIEDAVAPLGTALTERQIEMLWRMV 295 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 I C+DGD AG+ AA RA++ ALP + L + LP G DPD L+ + G +A E Sbjct: 296 ERPILCFDGDAAGQRAAMRAIQRALPLLRPAHSLGIVRLPAGLDPDDLINQRGAQAMEDI 355 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + + L L+ L +P+ +A L + + + ++ R+EL ++ Sbjct: 356 LAKPGSLLDTLWQFERDAEPLDSPEAKAGLKARLMAHVDAIGDADIKALYRRELLDRFS- 414 Query: 422 LDDSQLERLMPKAAE------SGVSRPVPQLKRTTMRIL------------IGLLVQNPE 463 P + RP P R + + + L+++P+ Sbjct: 415 DYAFPRREKAPWKPNGFSKSLASRPRPDPAAIRALQKTIQGGSRDALTGAVVAGLIRHPD 474 Query: 464 LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWD 523 L E + R + P L ++LE +A +L+ D Sbjct: 475 QIDRHAD--ALAEAAERDANIARAI------NPLLDMAEILEDGGELPISADSGRLAPPD 526 Query: 524 --------DIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 + D A + ++++ + + + L Sbjct: 527 RSHFSFLQEGTDPEDAREDLAEAVSLLVERPALETALAAATARFDTDPEGAFAEQQRLLK 586 Query: 576 QEL 578 ++L Sbjct: 587 RKL 589 >UniRef50_D1N3F9 DNA primase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N3F9_9BACT Length = 618 Score = 476 bits (1226), Expect = e-133, Method: Composition-based stats. Identities = 160/621 (25%), Positives = 264/621 (42%), Gaps = 52/621 (8%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKN-FHACCPFHNEKTPSFTVNGEKQFY 59 M + + I D+ AR DIV+LI V+LK+ G N + CPFH EKTPSF V+ +Q + Sbjct: 1 MNFGVSKDIIEDIRARCDIVELIGTFVQLKRSGTNTYKGLCPFHQEKTPSFHVDASRQTF 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG---SGPSQIERHQRQTL 116 HCFGCG G+ F M+ + + FV+ + LA+ + +P +G G + ++R+ L Sbjct: 61 HCFGCGKGGDVFRFYMDKENVGFVDALHMLASRVGVVIPENSGGGDPGEGRRRANERERL 120 Query: 117 YQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 YQ+ + TF+ Q L + + A +YL +RG+ EV RF IG P W L Sbjct: 121 YQINEAFATFFHQVLVRNPNSPAAEYLRRRGIPPEVAERFKIGACPDEWTACLDYGRSLG 180 Query: 177 ENRQSLIDAGMLVTN-DQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLN 232 + L+ +G++ + GR +D F+ R+ F I +++GRV+GF R L KY+N Sbjct: 181 FTDEELVTSGIIRKKAETGRCFDHFKGRLTFAIENEQGRVVGFSCRSLEAKPLAGGKYIN 240 Query: 233 SPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 +PET IF KG LY L A++ ++ N ++ EG +D +A + GI AVA GTS T + Sbjct: 241 TPETPIFKKGNLLYALPLARKMMSDRNMAVICEGQLDSIAFHRAGIECAVAPQGTSFTEN 300 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 ++L R N + D D AG+ A R +E LP ++ + +P G+DPD L Sbjct: 301 QARILSRYCNRIYLALDSDSAGQKAILRDVEILLPMS---FDIKVVRIPGGKDPDELFAH 357 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G A + ++ ++ L +SL + D+ + GR + ++++ + Sbjct: 358 GGAAALQQALDDSVSWLKVLCDSLPQRHDMGSAAGRGHAAVEVAGYLNRITNQVELELYV 417 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTM--------------------- 451 ++ LG+ +D+ L + ++ + + Sbjct: 418 RDAAMLLGVSEDALYAELRQVSRKARRNEEFSRGGPAAEPAYTPNTGEFIPPRPRSENRP 477 Query: 452 --------------RILIGLLVQNPELATLVPPLENLDENKL--PGLGLFRELVNTCLSQ 495 L+ L V + A + L +E P VN L+ Sbjct: 478 LPGIQQEDPCSPALLTLLELAVNSETAARQIAELVPPEELPDSNPIARAVNLTVNLALNG 537 Query: 496 P-GLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL 554 +L E L D A +S + + Q L Sbjct: 538 EFEQVPAELSELLIEHPVPEISRILVSEFVCKDIPTA---VEESAAELRRQFKKEEQRLL 594 Query: 555 IARERTHGLSNEERLELWTLN 575 + + + E L L Sbjct: 595 MLQMKNASTPEERLALLTRLQ 615 >UniRef50_C0GN04 DNA primase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN04_9DELT Length = 565 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 160/578 (27%), Positives = 260/578 (44%), Gaps = 24/578 (4%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + ++ +R + D++ V+LK G CPFH E SF+V ++ FY+CFGC Sbjct: 4 IDPREVAEIKSRLSLEDIVGRYVQLKTVGGRLMGPCPFHQETRASFSVTPDQGFYYCFGC 63 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 A G+ I+F N + L+F E V +LAA +++ G P + ++ N Sbjct: 64 QASGDIIEFFKNINGLDFNEAVTQLAAEAGVKL-ARQGGSPGPASMGRASVCREVNSWSN 122 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 +F+ Q LQ AR YLEKR +S E F +G++P GW+N+ + ++ Sbjct: 123 SFFGQHLQGSNGQKARLYLEKRQISQETAKAFGLGWSPDGWNNLKSFLESRGFTPEDGVE 182 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 AG+L N++GR YDRFR R++FPI G V+ FGGRV+G+D PKYLNS E+ I+ KG Sbjct: 183 AGVLSRNERGRIYDRFRARLIFPIIALSGAVVAFGGRVMGDDEPKYLNSSESPIYTKGEH 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGLY+A+ +R+L+ EGY+DV+AL QYG + LGT+ T ++ + V Sbjct: 243 LYGLYQARTHITRSSRVLLTEGYLDVMALHQYGFENSCGILGTALTKAQVKRMAGLAREV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + +DGD G+ AA ++ E L G R + LP+GED +L+ G++ E +++ Sbjct: 303 VLIFDGDAPGQSAALKSAEMILQ---AGLTCRVLILPEGEDAHSLLVARGRQGLEDLLQK 359 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDD 424 F L I+ + R Y + + LG+ + Sbjct: 360 TTDGLDFCLKMLSTNKSPG------ETMKWVENFITHFKDLSWRSYYIPRVAHVLGLTEK 413 Query: 425 SQLERLMPKAAES-GVSRPVPQLKRTTM---RILIGLLVQNPELATLVPPL-ENLDENKL 479 E+ P A ++ G +R Q + R L+ V PE T + L Sbjct: 414 ELREKFTPAAQKTPGDTRVWSQQGKGAEQRDRELLTFAVCFPEDRTRLQNKNLGLVLTSQ 473 Query: 480 PGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLE-KLSMWDDIADKNIAEQTFTDS 538 + +L L +A ++ K+ +K + Sbjct: 474 WARQFWDKLRVMHQDD--------LSALNEDESAFFVQSKMQRAQLEKEKTRILAQIEEF 525 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQ 576 ++ + + ++R + +E R L L + Sbjct: 526 IDRCMTRMSTRNLKTALSRAQQSQDQDEVRRILQLLQK 563 >UniRef50_D1Y6N2 DNA primase n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y6N2_9BACT Length = 580 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 167/600 (27%), Positives = 263/600 (43%), Gaps = 45/600 (7%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 + + + DIV+L+ V+L K+G+N+ CPFH+EKTPSF V+ ++ +HCFGC Sbjct: 1 MADEIVAKIKDAVDIVELVGDSVRLVKKGRNYSGLCPFHDEKTPSFIVSPDRGTWHCFGC 60 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 G G+ F+M + L F E +E L +E+P R Q LY +M+ Sbjct: 61 GKGGDVFSFVMEKEGLSFPEALEYLGRRAGIEIPRRKN-------RGQTTDLYSVMEMAV 113 Query: 125 TFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLID 184 FY+ L+ + YL +R +S + F +G++P W + ++ L+ Sbjct: 114 DFYRAELKGAAGAVGKGYLSRRSMSVQDADAFELGWSPSAWRALNDALRREGVTQEQLLK 173 Query: 185 AGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQ 244 G+++ ++G YDRFR RV+FPIR+ GR I GGR++ + KYLNSPE +++K Sbjct: 174 CGLVIQGEKG-CYDRFRGRVIFPIRNVSGRAIALGGRIVDGEGAKYLNSPEGPLYNKKEN 232 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LY L +A+ E R ++VEGYMD + L +G VASLGTS T + LL R ++ Sbjct: 233 LYLLDKAKNAIREKGRSILVEGYMDAIRLHMHGHRETVASLGTSLTEEQALLLKRFSDKC 292 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA-FEARME 363 CYD D AG++A R + G Q+ + P G+DPD +++ EG E F +E Sbjct: 293 YICYDSDTAGQNATLRGMYILQ---RAGLQVFVVLFPGGKDPDEMLQSEGGEQLFNEAVE 349 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL- 422 A PL + DG+A+ + L ++Q+ QE+ + +G+ Sbjct: 350 NARPLVLHHIGLFKAAAEK---DGQAKAAEELLEGMAQLT-AVELAPYMQEIAHAVGLPD 405 Query: 423 --------------------DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNP 462 ++S + P E+ S P L+ LL + Sbjct: 406 YQLASELNRLRRGRRLSPRAEESLAGDVQPLELETADSETPPNCDP-AETGLLYLLWISR 464 Query: 463 ELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW 522 EL E + + P L + QP + LE +A S Sbjct: 465 ELRMSASVAEVVRMFQDPRLKDIAGAL-LTGEQPESLEHRWLEMGDHFPMSALSGGASFC 523 Query: 523 DDI--ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 D + D ++ D + R +L A S E+ E L EL + Sbjct: 524 DTLSGTDMEKWQKLSADQGRRVKQ----ARYIQLKAMMFRGEASPEDLTEYSALAAELKR 579 >UniRef50_C7NH61 DNA primase n=2 Tax=Micrococcineae RepID=C7NH61_KYTSD Length = 652 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 171/650 (26%), Positives = 268/650 (41%), Gaps = 75/650 (11%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I I + RT + D++ V L+ G + CPFH+EKTPSF V + Sbjct: 1 MAGLIRSEDIQAVKERTSLEDVVREHVTLRTAGVGSLKGLCPFHDEKTPSFQVRPAVGHW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIER-HQRQTLYQ 118 HCFGCG G+ I+F+ D L F E VE LA +E+ +E G GP + +R L + Sbjct: 61 HCFGCGEGGDVIEFVQKIDHLSFAEAVERLAGQLGMELRYEEGKGPQREGGLGRRARLVE 120 Query: 119 LMDGLNTFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 FY Q L A R +L +G A F +GF+P + + Sbjct: 121 AHRAAEQFYHQQLLGAREARPGRDFLRAKGFGSGEAAHFGVGFSPRTGSALYEHLRAGGF 180 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSP 234 + L+ AG+ + +G YDRFR RVM+PIRD G +GFG R + +D KYLN+ Sbjct: 181 TDEELLTAGLAGRSSRG-MYDRFRGRVMWPIRDITGDTVGFGARRIFDDDRIAAKYLNTS 239 Query: 235 ETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHI 294 ET I+ K + LYGL A++ A+ +VVEGY DV+A G+ AVA+ GT+ A+HI Sbjct: 240 ETPIYTKNQVLYGLDLAKKAMAQQRTAVVVEGYTDVMAAHLSGVEVAVATCGTAFGAEHI 299 Query: 295 QLLFRATN--------NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDP 346 ++L R V+ +DGD AG+ AA +A ET + + PDG DP Sbjct: 300 KVLRRILRDEANQAPARVVFTFDGDAAGQKAAMKAYETDQAWASQS---YVAVAPDGLDP 356 Query: 347 DTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGET 406 + L + G +A A +E A+P+ F + + + DL+TP+GR A P+I+++ + Sbjct: 357 NDLRTQRGSQAVRALIEDAVPMFEFAVRTSIDRYDLATPEGRVGAMRAAAPIIARIRDRS 416 Query: 407 LRIYLRQELGNKLGILDDSQLERLMP--------------------------KAAESGVS 440 L+ + + +G+ + +AAE Sbjct: 417 LQPEYTRTVAGWIGVEVGDLSREVAAARRSGAGQPSAPGRPAAPPPVGGGSGRAAEGAGD 476 Query: 441 RP----------------VPQLKRTTMRILIGLLVQNP-ELATLVPPLENLDENKLPGLG 483 P R L+ +++Q P + + P L Sbjct: 477 APGELAEPAGPPPLPPVDPRNPDHAAERQLLQVVLQYPGSVTGTEHSSLSATAFTAPALA 536 Query: 484 LFRELVNT---CLSQPGLTTGQLLEHYRGTNNAAT------LEKLSMWDDIADKNIAEQT 534 L + L+ G ++ R + L + +++ Sbjct: 537 LVHAAITEAGGIERAVTLSHGAWVQQVRDAADPRVHDLVGELSVAGLPVRMSNGQPPAGY 596 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERL-----ELWTLNQELA 579 + + L + + + G + ER L +EL Sbjct: 597 VEGLVARLRIVELNRLIADALGALQRLGEGDAERSREIGVRLQGWQRELQ 646 >UniRef50_Q3AT54 DNA primase n=1 Tax=Chlorobium chlorochromatii CaD3 RepID=Q3AT54_CHLCH Length = 660 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 167/643 (25%), Positives = 281/643 (43%), Gaps = 68/643 (10%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ IP I+++ DIVD++ V L+ G+N+ A PF EKTPSF V+ +KQ Y Sbjct: 1 MS-MIPPAIIDEVRQAADIVDVVSDYVALQPSGRNYKALSPFTQEKTPSFIVSPDKQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF G GN F+M +K+ F+E ++ +A +++ + E + Q + Sbjct: 60 CFSTGKAGNVFSFIMEMEKVPFMEALKLVAQRAGIDI-SRYTEPKGKQEGEEEQGSGAAL 118 Query: 121 DGLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + L+QP +Y E+RGL E I RF +G+AP WD +L+ Sbjct: 119 RWAARMFHSLLKQPAGAEGWRYFVEERGLREETINRFGLGYAPESWDFLLREARREGIKS 178 Query: 180 QSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPET 236 + L++ G+LV ++ YD FR RV+FPI + G+V+GFGGR L +PKYLNSPE+ Sbjct: 179 EQLVELGLLVSHREKQSLYDSFRHRVIFPIFSRGGQVVGFGGRALVSDERSPKYLNSPES 238 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +F K + LYGL+ A+ + R ++VEGYMDV+AL Q G+ AVAS GT+ T ++ Sbjct: 239 AMFAKSKLLYGLHFAKNEIRRQERAILVEGYMDVLALHQAGLTNAVASCGTALTRYQAKM 298 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L + +V+ YD D+AG+ + ++ +++ + + LP+G+DPD+ VR+EG++ Sbjct: 299 LRHYSEHVLFVYDADKAGQKSMMSGIDIL---VSEQMVPQVLMLPEGDDPDSFVRREGRQ 355 Query: 357 AFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 F E M F STP+ +A + + I+ +P R QEL Sbjct: 356 GFLQYAESHTMGFQDFQLAFFEAAGAFSTPEQKAEALRVMVRTIALIPKRAQRELYAQEL 415 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT------------------------- 450 K+G+ + E L + + K + Sbjct: 416 SKKVGLTVTALRELLGNATSAVAKQQSCTPSKASATAPTSSSATNATSAPTIPHAPNLPN 475 Query: 451 ----------MRILIGLLVQNPELATLV-----PPLENLDENKLPGLGLFRELVNTCLS- 494 + + L+++ + T V L+ +F L++ + Sbjct: 476 AQALPPLSVLEKTFLKALLESTQYGTAVLGFAASHQSMLELRHPLAQEIFAHLIHRYHNI 535 Query: 495 ----QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQT------------FTDS 538 + + + + L + I+ K + F D+ Sbjct: 536 AADPEATIDMVSEISAFTNPETRDLASTLLLDPPISPKWQQQNDLFSEQARRCLAMFLDA 595 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++ L + +L+ + R + E +EL L KK Sbjct: 596 FKNLVLEPLLDEKNKLMEQIRVEE-NVEREIELSRQKIVLDKK 637 >UniRef50_C1F7T6 DNA primase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7T6_ACIC5 Length = 590 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 163/591 (27%), Positives = 264/591 (44%), Gaps = 25/591 (4%) Query: 8 VFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 F ++ + DIV +I V+LKK G NF CPFH+EKTPSF+V+ +QF+HCFGCG Sbjct: 3 DFAQNVKQQADIVRIIGEYVRLKKAGAQNFSGLCPFHSEKTPSFSVHAGRQFFHCFGCGQ 62 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQLMDGLNT 125 G+ F+ + + F E V +A + +P S E QR L L + Sbjct: 63 SGDVFTFVQKIENVSFPEAVRTVAQKCGIALPKREFHSPEEAAEHRQRAKLIDLHEAAAQ 122 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++++ L+ +AR YL +RGL + IARF IG+AP + + +R G + +L + Sbjct: 123 WFEEQLRSGEGAAARAYLAQRGLDEKGIARFRIGYAPDSFHALRERLQGMA-DLDTLRQS 181 Query: 186 GMLVTNDQ-----GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT---PKYLNSPETD 237 G+ +Q G Y RFR+R+ FPI ++ GR+I F R L + PKY+NSPET Sbjct: 182 GLFSWKEQEDGQPGPIYSRFRKRITFPIANEGGRIIAFTARALESGEKAGPKYMNSPETP 241 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ KG L+ L +A+Q E + ++VEG MD ++ GI +A+ GT+ T +LL Sbjct: 242 LYSKGHVLFNLDKARQAIREADFAVLVEGQMDCISAYLAGITNVLATSGTAFTEMQARLL 301 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R + VI +D D AG +AA +++ +G +++ + L G DPD +R+ G A Sbjct: 302 ARYSKRVIVNFDPDTAGANAAEKSIGLLTE---EGFEVKIVTLDGGLDPDRFIRENGVRA 358 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + + A +L Q +P+ + + LP I +VP R + Sbjct: 359 YMDALRTARRYQEYLIERARVQFPPRSPEAKVKALNFLLPHIRRVPNAIARNEFATDAAQ 418 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKR--TTMRILIGLLVQNPELATLVPPLENLD 475 LGI E L A+ Q +IL+ P L Sbjct: 419 SLGIDSSLMREELKQAVAKRRDFVASAQAYPLTRAEQILLMAFAAAPGSEARHTAEAALA 478 Query: 476 ENKLPGLGL---FRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE 532 + + +++V+ ++ L + L L + D A Sbjct: 479 RHSEDFARIREDVQQMVHLLRAREA--GIDPLAAMQEPQQKQMLASLFVSVH--DAEPAS 534 Query: 533 QTFTDSLNHMFDSLLELRQEELIARERTHGLSN--EERLELWTLNQELAKK 581 ++ + LE +Q EL + E+ L+L QE+ ++ Sbjct: 535 AEVEAAMLTVRRLALEQQQRELRGSILEAERTGRMEDALQLTRHAQEITRR 585 >UniRef50_A1UTE3 DNA primase n=5 Tax=Bartonella RepID=A1UTE3_BARBK Length = 646 Score = 475 bits (1222), Expect = e-132, Method: Composition-based stats. Identities = 183/613 (29%), Positives = 292/613 (47%), Gaps = 39/613 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKL-----KKQGKNFHACCPFHNEKTPSFTVNGEKQF 58 R P F++++ R I +I RV K +F CCPFH EKTPSF + K + Sbjct: 3 RFPPDFLDEIRTRLPISTVIGQRVTFDPRKSKSSRGDFWCCCPFHGEKTPSFHCDDRKGY 62 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 YHCFGCG G+ +FL D L+F E+VE LA + +++P S Q+ LY Sbjct: 63 YHCFGCGVSGDIFNFLCELDGLQFSESVERLADLAGMKLP--VLDLQSYKREMQKADLYD 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 +M F+Q +L ARQYL++RG++ E+ RF IGFAP + + + Sbjct: 121 VMAIATDFFQNNLYDKGGAQARQYLDERGITPELAKRFRIGFAPAKRTALKEVLSARGVS 180 Query: 179 RQSLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND-TPKYLNSPET 236 + + D G+L++ + YDRFR R++FPI+D RGRV+ FGGR L D KYLNSPET Sbjct: 181 VKQMEDCGLLISGEDIAVPYDRFRNRIIFPIQDLRGRVVAFGGRTLDQDVQAKYLNSPET 240 Query: 237 DIFHKGRQLYGLYEAQQDNA-----EPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 +FHKG LY A+++N+ + +LVVEGY+DV++L + G VA LGT+ T Sbjct: 241 VLFHKGNILYNAASARKNNSFTSGEKAPSILVVEGYIDVISLIKAGFEKVVAPLGTALTE 300 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 I+LL++ +++ I C+DGD AG AA+R + LP + G +RF+ LP G+DPD +VR Sbjct: 301 AQIELLWKMSSDPILCFDGDDAGLKAAFRVADRVLPLLKAGLSVRFILLPQGQDPDEIVR 360 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 G + F++ +++++PL L+ TP+ RA L I ++ E++R Y Sbjct: 361 VGGAKFFDSYVQKSIPLIELLWLRATYGKRFETPEERAALERELKQEIFKIKDESVRRYY 420 Query: 412 RQELGNKL---------------GILDDS----QLERLMPKAAESGVSRPVPQLKRTTMR 452 Q++ +L G ++ ++ S + R Sbjct: 421 LQDIKKRLFDFFRSSFSKKKSTEGYSENQKNGIFQGKIFSALENSDMVRTSSHSIPLREA 480 Query: 453 ILIGLLVQNPELA-TLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 +++ +L P+L L L+ + + ++ SQ L ++ Sbjct: 481 VILLVLAHYPDLWHENFEVLAELELKNTQLMNFHQSMLEILGSQCLLAEETMIIALEKKG 540 Query: 512 NAATLEKLSMWDDIADKN--IAEQTFTDSLNHMFDSLLELRQEELIARER---THGLSNE 566 LE + A D+ + + ++ QE + + L N Sbjct: 541 QKIILEHMMNLVQKVGMRTFFARAPIEDARSVLKQAIYLHLQEHHLHKRLQDIEEQLLNN 600 Query: 567 ERLELWTLNQELA 579 E++ L +E Sbjct: 601 PSSEIFDLLRETK 613 >UniRef50_D2QT03 DNA primase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QT03_9SPHI Length = 703 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 158/465 (33%), Positives = 245/465 (52%), Gaps = 24/465 (5%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + + DI+++I+ V LKK+G N+ ACCPFHNEKTPSF VN +Q Y CFG Sbjct: 2 RIPEETVERIRQSADILEVINDFVSLKKRGSNYIACCPFHNEKTPSFNVNPTRQIYKCFG 61 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G+++ F+M+ + + + E + LA + +E+ + + + +++R++L +++ Sbjct: 62 CGKAGDSVRFIMDIENIGYGEALRYLAKKYGIEIEEQEQTPEDLLRQNERESLLIVLNFA 121 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 TF+Q++L+ Y +RG ++ I F +G+ WD +LK +R Sbjct: 122 KTFFQETLKTTDEGKSIGLSYFRERGFTNPTIDAFELGYTLDQWDALLKEGIRRGYSRDL 181 Query: 182 LIDAGMLVTND-----QGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-------PK 229 L AG+++ + + +DRFR RVMFPI + GRVI FG R+L D PK Sbjct: 182 LEKAGLILVKEGSAGGDSKVFDRFRGRVMFPIHNVSGRVIAFGARILKTDKNQPGGAAPK 241 Query: 230 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTST 289 YLNSPET ++HK + LYG+Y+A+Q + + + EGY DV++L Q GI VAS GTS Sbjct: 242 YLNSPETSVYHKSQVLYGIYQAKQAIRQEDVCYLTEGYTDVISLHQAGIKNVVASSGTSL 301 Query: 290 TADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 T + I+L+ R T NV YDGD AG AA R L+ L + R + LPDGEDPD+ Sbjct: 302 TTEQIRLISRFTPNVTILYDGDAAGIKAALRGLDMVLEEGLNLRL---LLLPDGEDPDSY 358 Query: 350 VRKEGKEAFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 V K G +AF+ + E + F + + + P RA + I+++P R Sbjct: 359 VHKIGADAFKTYIREHSQDFIDFKASRWLTEAG-DNPLKRAEGISDVCVSITKIPDALKR 417 Query: 409 IYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI 453 L Q + + + S + + + Q K+ R Sbjct: 418 QTLSQRVAQVFHVSEQSVISEINRLLR-----KQHDQSKKDAERQ 457 >UniRef50_C9LLN0 DNA primase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLN0_9FIRM Length = 597 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 163/596 (27%), Positives = 281/596 (47%), Gaps = 38/596 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDAR-VKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 + F+ + T+++D+I A + +KK+G + ACCPFH+EKTPSF+++ E FY+CF Sbjct: 3 KFNNEFLQRVKDSTNLIDVIRAYGIDVKKKGSRYWACCPFHHEKTPSFSISPEDGFYYCF 62 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GC G++I F+ D++ F + VE LA M ++E+P + S + E LY++ + Sbjct: 63 GCHESGDSIKFIEKMDQITFPDAVERLAEMGHVELPPDEISEEDKREAALVHKLYEVTEL 122 Query: 123 LNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVL-KRFGGNPENRQ 180 ++ L + + Y +KR L + I F +GFAPP W+ + + Sbjct: 123 AGNYFHNCLLRTNIGKDGLAYFKKRHLDDKTIETFKLGFAPPEWERLYCDFTKRKHISPD 182 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDI 238 L+ AG++ + G+ YD FR R MFPI D +GR++ FGGR++ KYLNSPET I Sbjct: 183 ILLQAGLVG-HKNGKYYDTFRNRCMFPIMDLKGRIVAFGGRIMHSEESAAKYLNSPETVI 241 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K R L+ +Y+A + + ++VEGYMD ++L +GI VASLGT+ T + +LL Sbjct: 242 FNKRRLLFPIYQALPEIRRKRQAIMVEGYMDAISLHAHGIKNVVASLGTAFTVEQARLLK 301 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + + VI YD D AG++A RALE A + G +LR L +G+DPD V G + + Sbjct: 302 KYADEVIFSYDMDAAGQNATRRALEIA---GSVGLKLRVALLGEGKDPDEFVNLHGGDEY 358 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++QA+P +LF +L Q D +T +G+ ++ +++ +++ Sbjct: 359 LEVIDQAVPALDYLFQALRTQYDGATLEGQQKILNEMFAVLTVQDNTYQFNSFIRKMART 418 Query: 419 LGILDDSQLERLMPKAAESG-----------------VSRPVPQLKRTTMRILIGLLVQN 461 L + + + ++ VS + +R +L LV + Sbjct: 419 LHMDEGLIRSEAIRYTKKNNSHVYISPNVYGEERTGTVSSNDGRQRRLEQELLKYCLVSH 478 Query: 462 --PELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 PE + D L + +E+ + LE+L Sbjct: 479 ILPEGFDSLEKYSFAD-------EFIGRLYDVLKQAGKGNIT--VEYAEARLERSDLEQL 529 Query: 520 SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 + + D + + + + + M L+ + R S+ ++ + L Sbjct: 530 A-QLMMTDYHGVAEPYEEYIRPMRKIYLQNEYKFHTQRAAELMESDPQKAKEEQLT 584 >UniRef50_C8NCL1 DNA primase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NCL1_9GAMM Length = 564 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 195/561 (34%), Positives = 280/561 (49%), Gaps = 18/561 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 MA RIP+ FI++L ARTD++ L+ +R+ KK G N ACCPFH+EKTPSF+VN +K FY Sbjct: 1 MAKRIPKPFIDELTARTDLLALLSSRITFTKKSGSNHWACCPFHDEKTPSFSVNTQKGFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTL-YQ 118 HCFGCG G+AI FLM+YD L F E +E LA + L VP+E + R L + Sbjct: 61 HCFGCGVSGDAIRFLMDYDNLPFPEAIERLAEFNGLSVPYEDDGRQVDPQEKDRYDLGLE 120 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + F+ ++ +AR YL +R L + F +G+APPG + +L G Sbjct: 121 CLADAAAFFHEAFYGESGKAARDYLRQRRLKKATVDTFLLGYAPPG-NALLAHLGSK-YP 178 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 Q L D G++ D YD FRERV+FPI + +G+ I FG R +G PKYLNSPET Sbjct: 179 LQLLQDVGLVGVKDD-HHYDWFRERVIFPIHNIKGKTIAFGARAMGEAQPKYLNSPETTW 237 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F+K +LYGL++A Q LLV EGYMDV+ L Q+G+ AVA+LGT+ HI L Sbjct: 238 FNKRFELYGLHQAMQT--RERTLLVTEGYMDVIKLWQHGVKNAVAALGTAIGDSHISQLR 295 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 + V +DGD AG+ AA +ALE + RFMF+P GEDPD+LV K G AF Sbjct: 296 KRAEKVYFSFDGDTAGQKAARKALEAVFSQHDKQHEWRFMFMPAGEDPDSLVEKAGIAAF 355 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLS-TPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 + M+ ++P SAF +L + + +A L+ A + +P R LR ++ Sbjct: 356 QQVMDASLPASAFFLQTLDDGAGAQRSAEAQAELAGEAQRWLELLPDADFREILRAQVMK 415 Query: 418 KLGILD------DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 + + + A V + K ++++ LL+Q P+ A + Sbjct: 416 RFDLPVLTLSGNAATATHTASPAWRPPREMVVVKPKDKGIQLMARLLLQ-PQCALPLRRW 474 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 E + L LF L L G + + + D Sbjct: 475 EYP--PEDAELQLFW-LYCYALQSSGADSAHAEAFLHQHGVYEAVASAAKLLARLDAQQQ 531 Query: 532 EQTFTDSLNHMFDSLLELRQE 552 FTD L ++ + + + Sbjct: 532 RDEFTDMLANLQKNYVSQQAR 552 >UniRef50_UPI000196B4EC hypothetical protein CATMIT_01301 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B4EC Length = 588 Score = 474 bits (1220), Expect = e-132, Method: Composition-based stats. Identities = 147/597 (24%), Positives = 280/597 (46%), Gaps = 25/597 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA R+ + I+++ DIVD++ ++L K+GKN+ A CPFH++ PS +++ +Q Y Sbjct: 1 MA-RLSQEKIDEIRQSVDIVDVMGQYLELHKKGKNYMAICPFHDDNHPSLSISQSRQIYK 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN F+ Y K+ FVE V ++A ++++ + LY + Sbjct: 60 CFVCGNGGNVFTFIQEYLKVPFVEAVMKVAEFGHVDMSGYSLEKRVVKVDEALAPLYDMH 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 Y L A YL RG ++I F IG+AP + +RF Sbjct: 120 AFALKLYMYYLYTQSGKQALDYLRHRGFDDDLIKMFGIGYAPEK-SILHERFQKEGYTEV 178 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRV--LGNDTPKYLNSPETDI 238 + + +G+++ N+ R YDRF +RVMFP+ D+ G+V+GF GRV + + KY+NSPE+DI Sbjct: 179 AQVKSGLVLENE--RHYDRFHDRVMFPLYDEFGKVVGFSGRVYKVQDKNSKYMNSPESDI 236 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F KG+ LY + A++ + + + EG+MDV+A+ + + +A +GT+ T DH+++L Sbjct: 237 FIKGKTLYNYHRAKEAVRQAGFVYINEGFMDVIAMHRAHHDNCIALMGTALTKDHLRMLK 296 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R T + C DGD AG+ AA ++ + + G +++ + LPDG DPD ++ EG E Sbjct: 297 RMTRTIHLCLDGDMAGQAAAMKSSDLL---TSQGFEVKIVLLPDGRDPDEILSTEGIEGL 353 Query: 359 EARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 +A ++ + F+ ++DL + R L A I+++ R + +L + Sbjct: 354 DAVLKDTLSPIDFMMAFECSRLDLRNYEDRKTLLVKACEKIAKIEDRIDRGHYIAKLSSL 413 Query: 419 LGILDDSQLERL--------------MPKAAESGVSRPVPQLKRTTMRILIGLLVQNPEL 464 + E+L + RP+ + L+ ++ + ++ Sbjct: 414 TDFPKEIIEEQLLNSSAILEHREQFSQNRIETIQDQRPILDKYTLAEKNLLFYMLNDRQV 473 Query: 465 ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDD 524 + + + L + + + + L++ +++A + + Sbjct: 474 SDIYEAKAGF-MHNDTYRALAAYIRDYYRTHKTMDVANLIDKIGSSHSALVNALTDIAEC 532 Query: 525 IADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 ++ D + + ++ +R++EL ++ L+ + E+ +L K+ Sbjct: 533 SLPLPYQKEVIDDYIARITENTKNIREQEL-QQQFKDVLAPSAKAEILQKLIDLKKE 588 >UniRef50_Q2RQB5 DNA primase n=2 Tax=Rhodospirillaceae RepID=Q2RQB5_RHORT Length = 620 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 196/556 (35%), Positives = 287/556 (51%), Gaps = 29/556 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P F+++L AR + ++ RVKL ++G+ F CPFHNEK+PSFTVN EK F+H Sbjct: 1 MA--LPNAFLDELRARLTLSSVVGRRVKLARKGREFLGLCPFHNEKSPSFTVNDEKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I F M + F E VE L+A LE+P E + + Q + ++M Sbjct: 59 CFGCGAHGDVIGFEMRAANIAFREAVERLSAEAGLEMPRE--TAEDRDRSRQAASHREIM 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + FYQ++L+ P A +YL RGL +ARF +GF+P G + + Q Sbjct: 117 EMACAFYQKALRLPEGRGAMEYLRGRGLDDATLARFRLGFSPQG-GALKAALAREGVDEQ 175 Query: 181 SLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +++D G+++ +D GR +D FR RVMFPI D GRV+ FG R+LG PKYLNSP+T +F Sbjct: 176 AMVDLGLILRSDDGRPAFDYFRGRVMFPIGDPAGRVVAFGARILGEGQPKYLNSPDTPLF 235 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG LY L A++ + ++V EGYMDV+ALA+ G+ +AVA LGT+ T ++ L+R Sbjct: 236 HKGHSLYNLGPAREAARQSGAIIVAEGYMDVIALARAGLGWAVAPLGTALTEAQMEALWR 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + C+DGD AGR AA RA+E ALP + GR LRF LP G DPD L+R+ G A Sbjct: 296 TIPEPVLCFDGDGAGRRAAARAMERALPLIGPGRSLRFALLPGGRDPDDLLREGGPVALR 355 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 ++ A+P S + L L+TP+ RA L ++++ +L+ + RQ L ++ Sbjct: 356 QVLDVAVPFSEMAWRELSEGQALTTPEQRAALEAAIDAFVAKIADRSLQGHYRQALRDRF 415 Query: 420 -----GILDDSQLERLMPKAAESGV---------SRPVP--------QLKRTTMRILIGL 457 G S+ ER + P P R R+L+ Sbjct: 416 WTVLRGDSARSRAERARKDPRKERKDGGRWRPGDRPPAPGLPVAAPADPARLRERLLLAA 475 Query: 458 LVQNPELATLVPPLENLDENKLPGLGLFRE-LVNTCLSQPGLTTGQLLEHYRGTNNAATL 516 ++ +PE+ V L R+ +V L L AA + Sbjct: 476 VLNHPEVFDHVGERLGAMILGEGALDSLRQDVVMILGGGKSLDMNGLWSQLSARGYAADV 535 Query: 517 EKLSMWDDIADKNIAE 532 L+ + + A Sbjct: 536 AALTRPELLIHGKFAR 551 >UniRef50_B3ESS6 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESS6_AMOA5 Length = 640 Score = 474 bits (1219), Expect = e-132, Method: Composition-based stats. Identities = 167/630 (26%), Positives = 278/630 (44%), Gaps = 58/630 (9%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 + + I + I +++ V LKK+G+N ACCPFH+E+TPSF+V+ K FY CFG Sbjct: 1 MLNQETIQAVQQAALIEEVVGDFVTLKKRGQNLWACCPFHHERTPSFSVSPSKGFYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 C A G++I F+ + + F+E V+ LA +++ + +H+R +LY LM Sbjct: 61 CDAAGDSIAFIKAIEGISFIEAVKYLATKYSIPIQETEEGHKDIAAQHERDSLYILMKLA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 N +Y Q+L + YL++RG++ + I +F +G++ W + Sbjct: 121 NNYYIQNLWEHSEGQRIGHAYLKERGITDDFIKQFELGYSLDSWQGFHEYALKQGYTDGL 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIF 239 L AG++V N + + YDRFR RV+FPI + G+VI F R+L ++ PKY+NSPET I+ Sbjct: 181 LEKAGLIVHNQE-KLYDRFRGRVIFPIHNLSGKVIAFAARILKPADNQPKYVNSPETPIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK LYG+Y+A+Q + ++ +VEGY DV++L GI VAS GT+ T IQL+ R Sbjct: 240 HKSDVLYGIYQAKQKIKQVDKCFLVEGYTDVISLHMAGIENVVASSGTALTDSQIQLVSR 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T ++ +DGD AG AA R ++ L G ++ + LP GEDPD+ +K AF+ Sbjct: 300 FTKHITVLFDGDTAGIKAALRGVDKILE---KGLHVKVILLPPGEDPDSYSKKLDSLAFQ 356 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + E F LM + P +A L I+ +P R Q+ Sbjct: 357 TYLQEHEQDFITFKAKLLMEGIG-DDPTQKAEAIKEILQSIALIPDAVNRTLFLQQCSRL 415 Query: 419 LGILDDSQLER----LMPKAAESGVS-----RPVPQLKRTT-----------------MR 452 L I + L L+ K E PV +L+ T + Sbjct: 416 LDINEGVLLGEHNKILVRKEKEHHRPHKLVHNPVNELQLTAKRGELIPLNWAATIEAYEQ 475 Query: 453 ILIGLLVQNPELATL---------VPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQL 503 I LL+ + + L ++ + L + + Sbjct: 476 ESIRLLLNYGSIILEDGNPLSTYLLQELADVPFQHPVYKHILSTYEELALQEQVIDINFF 535 Query: 504 LEHYRGTNNAATLEKLSMWDDIAD-------------KNIAEQTFTDSLNHMFDSLLELR 550 ++H ++ + +++D ++ + ++ + L+ Sbjct: 536 VQHTDERIQKTAIDLTASPYEVSDKWQEKYQINISKEEDNLYRNAYKNILRLKLRLIHQL 595 Query: 551 QEELIARERTHGLSNEERLELWTLNQELAK 580 EE + EE +L + L + Sbjct: 596 IEENNKLLKNTVHEPEEEDKLLQVYATLKQ 625 >UniRef50_C6I9F5 DNA primase n=7 Tax=Bacteroides RepID=C6I9F5_9BACE Length = 675 Score = 473 bits (1218), Expect = e-132, Method: Composition-based stats. Identities = 143/455 (31%), Positives = 228/455 (50%), Gaps = 10/455 (2%) Query: 2 AGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHC 61 I + I+ +L IV+++ V L+K+G N+ CPFHNEKTPSF+V+ K C Sbjct: 7 KTMIDQATIDRILDVAQIVEVVSDFVTLRKRGVNYVGLCPFHNEKTPSFSVSPSKGLCKC 66 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 F CG GNA+ F+M ++++ + E + LA +N+E+ + + + R++++ + + Sbjct: 67 FSCGKGGNAVHFIMEHEQMSYPEALRYLAKKYNIEIKERELTNEEKEVQSNRESMFIVNN 126 Query: 122 GLNTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 ++Q L+ V Y +RG ++I +F +GF+ G D + + + Sbjct: 127 FARDYFQNILKNHVDGRSIGLAYFRQRGFRDDIIDKFQLGFSTEGRDALAQEALRKGFKQ 186 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL---GNDTPKYLNSPET 236 + L+ G+ D + DRF RVMFP+ G+V+ FGGRVL KY+NSPE+ Sbjct: 187 EFLVKTGLCYETDDHKLRDRFWGRVMFPVHTLSGKVVAFGGRVLSTENKKLAKYVNSPES 246 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +I+HK +LYG+Y A+Q + +R +VEGY DV+++ Q G+ VAS GTS T I+L Sbjct: 247 EIYHKSNELYGIYFAKQAIVKQDRCFLVEGYTDVISMHQSGVENVVASSGTSLTPGQIRL 306 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 + R TNN+ YDGD AG A+ R ++ L +G ++ LPDG+DPD+ RK Sbjct: 307 IHRFTNNITVLYDGDMAGIKASIRGIDMLLE---EGMNIKVCLLPDGDDPDSFARKHNAT 363 Query: 357 AFEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 F+ + E F LM P RA L + I+ +P +R +E Sbjct: 364 EFQNFIQEHETDFIRFKAQLLMEDAG-KDPMKRAELINDIVRSIAVIPEAIVRDVYIKEC 422 Query: 416 GNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT 450 G L I D + + + P Sbjct: 423 GQLLRIEDKLLVSEVAKRRELQAEKGNKPIASNNA 457 >UniRef50_B9R233 DNA primase catalytic core, N-terminal domain family n=3 Tax=Alphaproteobacteria RepID=B9R233_9RHOB Length = 661 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 186/614 (30%), Positives = 282/614 (45%), Gaps = 41/614 (6%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQF 58 R ++++ AR + +++ RV ++ GK ++ ACCPFH EK+PSF V+ + Sbjct: 14 RFEPRLLDEIRARLPLSEIVARRVTWDRRKTQPGKGDYWACCPFHQEKSPSFHVDDRRNR 73 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 Y CFGCGA G+ F+ + L F E VE LA + +P A + +R +L Sbjct: 74 YKCFGCGASGDHFKFITETEGLSFPEAVERLADQAGVALP--APDPQAARREQKRASLAD 131 Query: 119 LMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 + + F++ P AR Y++KRGL+ E + F GFAP D + G Sbjct: 132 ICEMAAQFFEAQFAGPRGEGARAYVQKRGLTPETLREFRFGFAPDSRDALKSHLKGRGVE 191 Query: 179 RQSLIDAGMLVTNDQGRS-YDRFRERVMFPIRDKRGRVIGFGGRV-LGNDTPKYLNSPET 236 ++I+AG+L+ D R YDRFR R+M PI+D RGRV+ FGGR L + PKYLNSPET Sbjct: 192 EPAMIEAGLLIKPDDARPSYDRFRGRLMIPIQDDRGRVVAFGGRTMLPDGQPKYLNSPET 251 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 +FHKG L+ + A++ + + LVVEGYMD +AL Q GI + VASLGT+ T D I Sbjct: 252 PLFHKGAMLFNAHRAREPAFKSGQALVVEGYMDAIALYQAGILHVVASLGTAFTEDQILR 311 Query: 297 LFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKE 356 L+R + C+DGD AG AA RA++ P + G +F FLPDG DPD LV++ G E Sbjct: 312 LWRFAPEPMVCFDGDAAGISAAHRAIDRIFPVLKSGYSFQFNFLPDGMDPDDLVKQRGVE 371 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F A E++ L +++ + L TP+ +A L LI + + ++ + +L Sbjct: 372 GFWAEAEKSRNLFDVVWDREISVARLDTPERKAALEKRFDDLIGTIRDDRVKRRYQLDLK 431 Query: 417 NKLGILDDSQLERLMPKAAESG-----------VSRPVPQLKRTTMRILIGLLVQNPEL- 464 KL L + G R R+++GL ++ P+L Sbjct: 432 FKLSNLFFELSRNDRKGGKKPGADPSANVIGLARERVAVSDDFGIERLVLGLCMRFPDLL 491 Query: 465 ---ATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLT-TGQLLEHYRGTNNAATLE--- 517 V L ++E + +V+ + + R + LE Sbjct: 492 DRNFERVSGLPLVNELHIGVRDALCRIVDDLETAAISDLIASFDDPLRDVMHEMVLETIG 551 Query: 518 ----------KLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE 567 L+ + N E + H D L EE + E + Sbjct: 552 LQEQKQAEFYALNHRFPLLKANPPEDFVGAAFLHFLDVLELNALEEELQSELNAADDQID 611 Query: 568 ---RLELWTLNQEL 578 + L Q+L Sbjct: 612 ELAWQRIQALTQDL 625 >UniRef50_C8XHB5 DNA primase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XHB5_NAKMY Length = 648 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 163/635 (25%), Positives = 262/635 (41%), Gaps = 63/635 (9%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFYHC 61 GRI + + I ++ V L+ G N CPFH+EKTPSF V+ + +YHC Sbjct: 2 GRITDADRERVRDASRIEQVVGEYVALRNAGGGNLKGLCPFHDEKTPSFQVSPARGYYHC 61 Query: 62 FGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMD 121 FGCG G+ FL D+L FVE+V+ LA + + G ++ ER R L + Sbjct: 62 FGCGKGGDVFSFLQEIDQLTFVESVQRLAERAGIALTLVEGGSSTRTERGTRPRLLAVNK 121 Query: 122 GLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 FY + LQ P A AR +L +RG A F G+AP GWD ++K G + + Sbjct: 122 AAAAFYAEQLQTPGAQVARDFLAERGFDLAAAAHFGCGYAPDGWDELVKALTGQGFSVEE 181 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSPETDI 238 L AG+ +G D+F R+++ IRD G V+GFG R L +D KYLN+ ET + Sbjct: 182 LYRAGVARQGQRGPI-DQFHRRLLWSIRDAAGDVVGFGARRLFDDDRVQAKYLNTSETPL 240 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 + K + L+GL A+++ + +++VVEGY DV+A+ G+ AVAS GT+ +HI +L Sbjct: 241 YKKSQVLFGLDLAKREIIKQRKVVVVEGYTDVMAMHLAGVTTAVASCGTAFGDEHISVLR 300 Query: 299 RATNN--------------VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGE 344 R + V+ +DGD AGR AA +A ++ + +G Sbjct: 301 RYLLDSQAGPGTMRARDGMVVYTFDGDAAGRQAALKAFDSDQRFAA---NTYVAIEKNGL 357 Query: 345 DPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPG 404 DP L + +G EA ++ A L F S + Q +L + +G +PL++++ Sbjct: 358 DPCELRQAKGDEALRELVDSARNLFEFAIASAVGQFNLDSAEGGYAALNAGVPLVARIKD 417 Query: 405 ETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKR---------------- 448 + LR + L G ER+ A + +R Sbjct: 418 DLLRDQFAKTLAMHAGTDIQETRERVRRAAQTRAQAPDPEPRRRPESRAGERQRSDPEPP 477 Query: 449 ------------------TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVN 490 T R + L +Q P L + + + P ++ Sbjct: 478 PEPEPPDLDWPDPRDRELTAEREALKLALQQPALVASAYGMIEAEVFRAPAYATVHRAIS 537 Query: 491 TCLS-QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD-----SLNHMFD 544 + ++ RG L L + L + + Sbjct: 538 ALGGPSGDRSGPAWVDEVRGELPEGRLRSLVTELAVERPEWLSDEVDARYAGSILARLAE 597 Query: 545 SLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 +++ LI+ + + + LN +LA Sbjct: 598 RQAIRQEKRLISALQRAEATG-DSALARELNADLA 631 >UniRef50_C4XS38 DNA primase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XS38_DESMR Length = 576 Score = 472 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 174/577 (30%), Positives = 262/577 (45%), Gaps = 27/577 (4%) Query: 10 INDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGAHGN 69 + + AR +I +++ V L+ G CPFH E SF V+ +K F+HCFGC A G+ Sbjct: 8 VAAVKARANIAEIVGRYVTLRPVGSRLVGPCPFHQETKGSFNVHPDKGFFHCFGCQASGD 67 Query: 70 AIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTFYQQ 129 IDF + LEF E +E LAA +++ + ++ +R + + + +++ Sbjct: 68 VIDFFCRINGLEFREGLERLAAEVGVDLGRARSDPRAAAKKRERDACLAMHELADRYFRH 127 Query: 130 SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLV 189 L + AR+YLE+RG+S E+I RF++G +P GW + G + S I AG+L Sbjct: 128 LLGRDEGRVAREYLERRGVSAEMIERFSLGVSPEGWQGLQTVLRGRGFDDDSAIIAGLLT 187 Query: 190 TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLY 249 GR++DRFR R+MFPIRD GRVI FGGRV+G PKYLNS ET I+ KG+ LYGLY Sbjct: 188 QGKNGRTWDRFRGRLMFPIRDGGGRVIAFGGRVMGEGDPKYLNSAETPIYTKGQHLYGLY 247 Query: 250 EAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYD 309 EA+ A+ R L+ EGY+DV+ L Q+G A LGT+ T + + L V +D Sbjct: 248 EARPVMAKTRRALLSEGYLDVITLHQFGYGEACGVLGTAMTHEQAKRLSGFAPRVDLVFD 307 Query: 310 GDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLS 369 GD GR AA RA + L G R + LPDGED D+L+ +G++ FEA +E+A Sbjct: 308 GDAPGRKAALRAAQMLLTL---GGACRVVPLPDGEDVDSLLHAQGRDGFEACLERAEDGL 364 Query: 370 AFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILDDSQLER 429 F + + A + + E LR + + LG+ + Sbjct: 365 NFCLRMVRESYAPR------EIVAWAGEFLGGLADEGLRALFIPRVASGLGLAEAELRRL 418 Query: 430 LMPKAAESGV-SRPVPQLKRTT--------MRILIGLLVQNPELATLVPPLENLDENKLP 480 L A RP ++ +V+ P+ A + + Sbjct: 419 LSRPAKRPAPGPRPGETAAPRQPAWELAPRDAQILSFVVRRPDYAAHLAGAGAGELLGNA 478 Query: 481 GLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE--QTFTDS 538 LF + +S E A K M ++D++ A + Sbjct: 479 DARLFFARLAGLVSDEA-------EARLTEPETAFWAKAQMEPPVSDEDAAAFFEELCVF 531 Query: 539 LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 L+ +S + I + G S E L L Sbjct: 532 LHEARESDRRRSVMDAIRLAQQRGDSEEALRLLGELQ 568 >UniRef50_B5YKU2 DNA primase n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YKU2_THEYD Length = 566 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 161/587 (27%), Positives = 274/587 (46%), Gaps = 41/587 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + + ++ R DIV+LI + LKK G+N+ + CPFH+EKTPSF VN KQ +HCFGCG Sbjct: 4 QKVLEEIKHRLDIVELISEYIDLKKTGQNYKSLCPFHSEKTPSFFVNPSKQIFHCFGCGK 63 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ + F+M Y+K+ F+E + LA LE S I ++ LY + + + Sbjct: 64 GGDIVTFVMEYEKVSFLEAISILAQKTGLEFE----SVKKSISHISKERLYAIYESATRY 119 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 Y + L + +A+QYL KRG++ + I F IG+AP +++ + + + Sbjct: 120 YMEQLNN--SENAKQYLIKRGINQKTIEIFQIGYAPAEKNSLYNFLKEKNFDDILINSSR 177 Query: 187 MLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDIFHKGRQ 244 ++ + YD FR R++ PI D GRVIGFGGR++ ++ PKY+NSP+T IF KG Sbjct: 178 LVSNS-----YDFFRNRIIIPIHDLTGRVIGFGGRLIDSSSELPKYINSPDTPIFKKGEN 232 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL-------L 297 L+GL+ ++Q E ++VVEGYMDV+ QYG VA LGT+ T + ++ L Sbjct: 233 LFGLWHSKQHIREKGYVIVVEGYMDVILCHQYGFKNVVAPLGTALTQEQLEKTKRILNNL 292 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 + TN ++ +DGD AG AA R+ LP G + + LP+ EDP + ++K G +A Sbjct: 293 KKFTNKILLIFDGDEAGIHAAQRS---LLPLFYGGFIAKIVLLPEKEDPASFLQKYGDKA 349 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 F+ + +A+ + + L +S + R L +EL Sbjct: 350 FKNYISKALSPIDLIIKTYPKN-------KLNEGIHSFLNSLSYLKDLIYRDELLKELSE 402 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKR----TTMRILIGLLVQNPELATLVPPLEN 473 K GI + + + L + +K IL+ + + PE + N Sbjct: 403 KTGINEKTLRDELKQIVHNKNFKKEKINIKNYLVSKEEEILLRIALSYPEKINYILQKIN 462 Query: 474 LDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 +++ ++ + + + +LL + + + D+ + Q Sbjct: 463 IEDFEVTIIRNIFSKIEELQKHGQFSLNKLLNIIDEEEKTFISKLIMTSE--IDEELIMQ 520 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 D L + ++ + +++ L EL + + + K Sbjct: 521 NMNDCLKSLAIKSIDKKIKKIAKSGDEKTL-----QELIRMKKNIIK 562 >UniRef50_C0JZY3 DNA primase n=1 Tax=uncultured bacterium URE4 RepID=C0JZY3_9BACT Length = 658 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 166/586 (28%), Positives = 266/586 (45%), Gaps = 24/586 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP+ + +L + D++ V LK++G + ACCPFHNEKTPSF V + Y CFG Sbjct: 1 MIPQETVQLILDTARVEDVVGDFVTLKRRGSSLWACCPFHNEKTPSFHVEPSRGIYKCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G A+ F+M Y+KL + E ++ LA +++EV + S R + ++L + + Sbjct: 61 CGKSGTAVGFVMEYEKLSYTEALKYLARKYHIEVKEKEESAEDIAARQRNESLLAVSEFA 120 Query: 124 NTFYQQSLQQPVATS-ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY+ L + A QY RGL E IA++ +G+AP + + + + L Sbjct: 121 FDFYKDQLATDEGRAVAVQYFHSRGLEDETIAKYGLGWAPKSKNALTEAAKKEGYKDEYL 180 Query: 183 IDAGMLVTND-QGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIF 239 ++ G+ D G +DRF +RVMFPI GRVI FGGR L KY+NS E++I+ Sbjct: 181 LETGLCAQWDTDGSLHDRFYDRVMFPIHSVSGRVIAFGGRTLFTDKSVAKYVNSKESEIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 K R LYG+Y A+ + ++ +VEGY+DV+++ Q GI VAS GTS T + I+L+ R Sbjct: 241 VKSRSLYGIYFAKSAISRADKCYLVEGYLDVLSMHQLGITNVVASSGTSLTVEQIRLIKR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 T NV YDGD AG AA R ++ L +G ++ + +PDG+DPD+ RK E E Sbjct: 301 FTENVTIMYDGDPAGIHAALRGIDLILK---EGMNVKVVLIPDGDDPDSYARKHTLEEVE 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 A + AF + L+ + + P RA L ++ +P R + K Sbjct: 358 AFIAANEQDFIAFKADLLLGEAG-NDPLKRANLINDIADSVAGIPDAVKRSVYTDAISAK 416 Query: 419 LGILDDSQLERLMPKAAE----SGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 I D +R+ + ++ + Q V L L Sbjct: 417 FRIDTDILTDRVRRTREKIQGEERTQAQREAIRARREEDVPRT--QEATYTPPVNELRAL 474 Query: 475 DENKLPGLGLFRELVNTCLSQPGL-----TTGQLLEHYRGTNNAATLEKLSMWDDIADKN 529 + REL+ L + + T L+ + + Sbjct: 475 ETQSPILAPSERELLRFILMDGSTPLVFESDSEFYSESPQTVAEFIDTALAGDGIVFAND 534 Query: 530 IAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLN 575 ++T+ ++++ I R+ +G + R + L+ Sbjct: 535 AYQRTYEAYFA----LYDAGKEQDEIVRDLLNGPDDAVRFVVSQLS 576 >UniRef50_B9MQ35 DNA primase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MQ35_ANATD Length = 617 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 178/594 (29%), Positives = 282/594 (47%), Gaps = 32/594 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + +L++ DIVD++ V LKK G NF A CPFH E+TPSF V+ KQ +HCFGCG Sbjct: 33 ERVVEQVLSKVDIVDVVSMYVPLKKVGVNFRALCPFHQERTPSFYVSPAKQIFHCFGCGV 92 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA-GSGPSQIERHQRQTLYQLMDGLNT 125 GNAI F+M + L F E ++ LA ++V F S ++ Q++ L L + Sbjct: 93 GGNAIHFVMRIENLTFTEALKVLAGKAKIDVDFSQTQSSKDKVLAKQKEELISLHNDCLE 152 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++Q+ L A +Y+ KRG+ E +F +GF P +N+ + +++ + + Sbjct: 153 YFQRQLYLRENMDAARYVLKRGIRKETAKQFGLGFCPED-NNLYEML-SRKYSKEIIDKS 210 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETDIFHKGRQ 244 G+ + G++Y RF R++FPI D RVIGFGGR++ + PKY+NSP+T IF K + Sbjct: 211 GIFIER-NGKNYCRFEGRLIFPIFDTMNRVIGFGGRIIEDSQAPKYMNSPDTLIFSKSKV 269 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 LYGL A+ + ++VEGYMDV++L Q GI+ V LGT+ T DH LL R N V Sbjct: 270 LYGLNIAKSS--KEKDFVIVEGYMDVISLHQEGIDNVVGVLGTALTQDHSFLLRRYKNEV 327 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 + C D D+AGR+A +R+ + +G ++ M L + +DPD ++K GK+AF + + Sbjct: 328 VLCLDSDQAGRNATFRSADIL---YQNGLIVKVMELENAKDPDEYIKKFGKDAFLLKKQN 384 Query: 365 AMPLSAFLFNSLMPQVDLSTPDGRARLSTL-ALPLISQVPGETLRIYLRQELGNKLGILD 423 AM F L DLS D + R ++ + E R ++L I + Sbjct: 385 AMFAIDFKVKQLSSNYDLSKSDQKFRFVREYFEKILMPITNEVERQEYIRKLSQLTQIDE 444 Query: 424 DSQLERLMPKAA------------ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPL 471 ++ L+ + + + + I LL E A + Sbjct: 445 EAILKEFTKNENIKLKRLESIQHFKQVQQKSNLTEEERIKKNDIDLLSIYVEWANKSESI 504 Query: 472 ----ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD 527 D LF + N LT LL + L S + Sbjct: 505 RNAVAEDDFCTEDIKMLFSSIKNLINEGMELTYSMLLTFVNDEKILSELTSFSSKGFETE 564 Query: 528 KNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 + A + + L + +L L++E L A++R E+ LEL L +++ + Sbjct: 565 E--AAKRAIEELKTNNNRMLWLKREMLEAQKRG---DTEKVLELQMLIRKIKDR 613 >UniRef50_A9IK88 DNA primase n=6 Tax=Betaproteobacteria RepID=A9IK88_BORPD Length = 682 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 198/431 (45%), Positives = 279/431 (64%), Gaps = 8/431 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 IP FI DLLAR D+VD++ V+L+K G N CPFHNEK+PSFTV+ KQFYHCFG Sbjct: 1 MIPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVSPTKQFYHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQ----TLYQL 119 CGAHG AI FLM + F E V LA + VP E S Q E +R+ Q+ Sbjct: 61 CGAHGTAITFLMEHTGASFPEAVRTLAGSVGMTVPEENRSPRQQAESARRKAEESRHTQV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 +D Y + L+ + +A QYL++RGL+ E+ A F +G++ + K F + + Sbjct: 121 LDAAQAHYLRQLR--ASPAAIQYLKQRGLTGEIAAHFGLGWSGTDRHGLAKVF--DNYDD 176 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +L++AG+++ ++ GR YDRFRERVMFPIR+ RG +IGFGGR++G PKYLNSPET +F Sbjct: 177 PTLVEAGLVIESEDGRRYDRFRERVMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG++LYGL+EA+Q + +++VVEGYMDVV LAQ GI AVA+LGT+TT DH++ L R Sbjct: 237 SKGQELYGLWEARQAIRQEGQVIVVEGYMDVVGLAQQGIANAVATLGTATTPDHVKKLLR 296 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 +++ V+ +DGD AGR AAWRAL+ LP + D +RF+FLP DPD+ VR+ G EAF Sbjct: 297 SSDRVVFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVRELGAEAFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 A + +AM LS FL L + +L+ +GRA A PL++ +P LR+ + +E+ ++ Sbjct: 357 ACLGEAMALSRFLLEELASRHNLAEAEGRASCLHEAKPLLAAIPECALRLQIEREMARQV 416 Query: 420 GILDDSQLERL 430 + + + L Sbjct: 417 QLTPEEMAQIL 427 Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 7/123 (5%) Query: 460 QNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR-GTNNAATLEK 518 +PEL + + +K P LGL R+L+ + G LL+ ++ AA L+ Sbjct: 556 AHPELVDTMGDQQLEVLDKGPHLGLVRDLIMLAQTSGARHVGALLQAADPDSDLAAVLKG 615 Query: 519 L-SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEE-RLELWTLNQ 576 + + D + + D+L + +A+ GL +EE R L+ Sbjct: 616 MRADLLAQEDLPEPQTEWDDALRRIEFDSARAE----MAKLAETGLGSEEARQRYQELSA 671 Query: 577 ELA 579 LA Sbjct: 672 RLA 674 >UniRef50_A6DP60 DNA primase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DP60_9BACT Length = 611 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 188/618 (30%), Positives = 302/618 (48%), Gaps = 48/618 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ R + R DIVD+I A VKLKK G F CPFHNEKTPSF VN QFYH Sbjct: 1 MSQDFERA-KQQVKDRNDIVDIIGAHVKLKKNGPTFLGLCPFHNEKTPSFNVNQNDQFYH 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFE---AGSGPSQIERHQRQTLY 117 CFGCGA G+ + F+ Y+ L+F + +E+LA+ N+ +P ++++++ L+ Sbjct: 60 CFGCGASGDVLKFVQEYESLDFRDALEKLASRANVILPEWGKGQSPEERLKQKNEKEALF 119 Query: 118 QLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPE 177 ++D F++Q L P A +Y + RGL+ EVI + +G+AP WD V+K + Sbjct: 120 DVLDKATNFFKQQLLLPQGAEALKYAQNRGLNQEVINNYRLGYAPNSWDAVMKWAKQHSI 179 Query: 178 NRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPE 235 + + L AG+ N+QG++YDRFR R+MFPI+D GRVI F RVL D KY+NSPE Sbjct: 180 SDELLATAGLTKQNEQGKTYDRFRNRLMFPIQDISGRVIAFSARVLEKDSKAAKYINSPE 239 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +FHKG LYGL+ A + E ++ EG +DV+A + G+ A+A+ GT+ T H Sbjct: 240 TPVFHKGNVLYGLHIAHKHLKESEHFVICEGQLDVIACHRAGVKNAIAAQGTAFTDQHAS 299 Query: 296 LLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 ++ R +V C+D D AG+ AA + L LP G + L +GEDPDT++ ++G Sbjct: 300 MIARYAKHVKLCFDADNAGKKAAVKCLNILLP---KGVIPEIISLEEGEDPDTVLSEQGA 356 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTP-DGRARLSTLALPLISQVPGETLRIYLRQE 414 E + ++ M F+ S+P + ++S L +++++P + + + Sbjct: 357 EVLKEKLSGGMNFVDFIL----SDYGPSSPSQEKVKISEFLLDILAKMPNVLMGDWHLR- 411 Query: 415 LGNKLGILDDSQLERLMP------------------KAAESGVSRPVPQLKRTTMR---- 452 L +KL + + E+L + A V+ P +L + + R Sbjct: 412 LASKLQLDAQAISEQLRYLVYNKRDHKQYMKPQAEFQQAPQNVAPPPLRLNKISKRSVAE 471 Query: 453 -ILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGL-TTGQLLEHYRGT 510 LI L + A LV E + L +N+ + Q L + Sbjct: 472 IELIALALSQEVFANLVFENTMDLEPETSESSLALHFINSHIEMGNWKDCSQDLANSYPN 531 Query: 511 NNAATLE--KLSMWDDIADK----NIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLS 564 ++ K+S + + + + Q D LN + + +E + E + + + Sbjct: 532 VYELVIKQNKISSYHSRSTEGDDFDELMQLINDCLNQISKASIEQKYEVIKEKLLSEQDP 591 Query: 565 NEER---LELWTLNQELA 579 ++ E LNQ+L Sbjct: 592 QIKQDLLKEYMALNQDLK 609 >UniRef50_B1MYH3 DNA primase DnaG n=1 Tax=Leuconostoc citreum KM20 RepID=B1MYH3_LEUCK Length = 620 Score = 470 bits (1210), Expect = e-131, Method: Composition-based stats. Identities = 148/616 (24%), Positives = 263/616 (42%), Gaps = 43/616 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RIP FI ++ + +IVD+I +L K+G+ + CPFH+++ PS V KQ ++ Sbjct: 1 MANRIPESFIAEVRQKVNIVDVIGQYTQLVKRGRQWTGSCPFHDDRHPSLFVEENKQVFN 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG G+ F+M + + + E + LA +++V + + + + Q ++ L Sbjct: 61 CFSCGRSGSVFSFVMEKEGMSYPEAIISLAESVDMQVDSQFVADATPRIDPKTQAIFDLQ 120 Query: 121 DGLNTFYQQSL-QQPVATSARQYLE-KRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPEN 178 YQ L +A YL KR L+ E I +F IGF P + +L+ + Sbjct: 121 AAAQRLYQHILQHTTSGETALHYLHDKRQLTDETIKQFGIGFVPDD-NVLLQYAETQNIS 179 Query: 179 RQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETD 237 R+ ++ + + ++ND+GR DRF RV++PIR G+V+GF GR L ++ KY+NSPE+ Sbjct: 180 REIMLASDLFLSNDEGRLRDRFAGRVVWPIRSTNGQVVGFSGRTLDSKNSIKYMNSPESP 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 F+KG+ LY A+ D + ++ EG+MDV++ G AVA++GT+ T DH++ L Sbjct: 240 FFNKGQILYNFDLAKGDIRKTGTAMIFEGFMDVISSEIAGRPAAVATMGTALTQDHVRQL 299 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R ++ YDGD AG++AA R++ + + + LPD DPD + ++GKE Sbjct: 300 TRLAKRILLVYDGDEAGQNAAKRSIH-LIQAQKQDVDIGIVHLPDDLDPDEVRVQKGKEV 358 Query: 358 FEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 + ++ AFL + +LS A+ ++ Q + + Sbjct: 359 LKQALDQNIQTPIAFLIQAARYNKNLSNQTQYLAFLGEAMTILQQ-ATPVEQDMQLTRIA 417 Query: 417 NKLGILDDSQLERLMPKAAESGV----------------------------------SRP 442 N+ G + +E+L ++ Sbjct: 418 NEFGTSKQALIEQLKQTPKRQSKETVNRTSQHFHQQSPQITDMEEPPLTGDDAAFSSNQQ 477 Query: 443 VPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQ 502 R LI ++++P++ V L + Q Q Sbjct: 478 STNQIEQAERALIMAMIKSPQVLEQVSDTTGFAFVHPEYQLLMMLIAIYQKQQAHFDLAQ 537 Query: 503 LLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHG 562 ++ + + L++ D + +D L + Q + + + Sbjct: 538 FMDFIQKPELNQRI--LAIDRTFGDLAVEPGAISDYLRIIMHDAPVEAQIKTLQQAIDVA 595 Query: 563 LSNEERLELWTLNQEL 578 + +L L EL Sbjct: 596 KQQHDDNKLLQLTTEL 611 >UniRef50_A6LD21 DNA primase n=12 Tax=Bacteroidales RepID=A6LD21_PARD8 Length = 705 Score = 470 bits (1209), Expect = e-131, Method: Composition-based stats. Identities = 136/452 (30%), Positives = 229/452 (50%), Gaps = 9/452 (1%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I+ +L +IVD++ V L+K+G N+ CPFH++K+PSF V+ K CF Sbjct: 1 MIDQPTIDRILDAANIVDVVSEFVTLRKRGINYVGLCPFHSDKSPSFYVSPSKNICKCFA 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G A+ F+M +++L + + + LA +N+E+ + + R R+++ + Sbjct: 61 CGEGGTAVHFIMKHEQLSYFDALRFLAKKYNIEIQERELTEKEKQIRSDRESMLIVNSWA 120 Query: 124 NTFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ L + V +Y +RGL ++I +F +G++ D + K ++ Sbjct: 121 GQYFSTLLHEHVEGKSVGMRYFAERGLREDIIRKFQLGYSLDQRDALYKTAIKAGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIF 239 L G+++ D G DRFR RV+FP+ G+V+ FGGRVL D KY+NSPE++I+ Sbjct: 181 LEKTGLVIAYDNGNVNDRFRGRVIFPVHTLSGKVVAFGGRVLKKDEKTAKYVNSPESEIY 240 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HK +LYG+Y A+Q + +R +VEGYMDV+ + Q G+ VAS GT+ T I+L+ R Sbjct: 241 HKSNELYGIYFAKQAIMKQDRCFLVEGYMDVIGMHQVGVENVVASSGTALTQGQIRLIHR 300 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 TNN+ YDGD AG AA R ++ L +G ++ + LP GEDPD+ R F Sbjct: 301 FTNNITVLYDGDAAGIKAALRGIDMLLE---EGMNVKVVLLPAGEDPDSFARSHSASEFA 357 Query: 360 ARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 + + F L+ + P R+ L + + ++ +P R +E Sbjct: 358 EFISQNETDFIRFKTKLLLAEAG-GDPIKRSALISDIIRTVAIIPDNIARSVYIRECSTT 416 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTT 450 + I + L + ++ ++ T Sbjct: 417 MEIDEQVLLNEVNKIRLNKEENQAAKSVRNTP 448 >UniRef50_Q6A956 DNA primase n=3 Tax=Propionibacterium acnes RepID=Q6A956_PROAC Length = 623 Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats. Identities = 150/609 (24%), Positives = 258/609 (42%), Gaps = 40/609 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGK-NFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI I + R I +++ V L+ G + CPFH+EKTPSF V + + Sbjct: 7 MAGRINEEDIALVRERARIDEVVGEYVTLRHAGGDSLKGLCPFHDEKTPSFQVTPSRGLF 66 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGCG G+ I F+ D L FVE V+ LA +++ P +E R + Sbjct: 67 YCFGCGEGGDTISFVQKIDNLTFVEAVQRLADKVGVQLRIIDDGRPG-LEPGLRMQILAA 125 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q + AR+++ RG S + +F +G+AP + Sbjct: 126 NEAAAEFFQSQMSTDEGRIAREFVAGRGFSPDAAVQFGMGYAPRDGHVLRDHLMAKGFAP 185 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYLNSPET 236 + LI++G++ + + +D F+ RV++PI+D V+GFG R + +D KY+N+PET Sbjct: 186 KVLIESGLVRS----QGWDFFQGRVLWPIKDSGKSVLGFGARRVYDDDRLPAKYVNTPET 241 Query: 237 DIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQL 296 ++ K LYGL A+ + + ++ ++VEGY DV+A GI+ AVA+ GT+ DH +L Sbjct: 242 PVYKKSHVLYGLDLARANIGKKSQAVIVEGYTDVMAAHLSGIDTAVAACGTAFGDDHARL 301 Query: 297 LFR-------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTL 349 + R VI +DGD AG+ AA + + + Q P G DP L Sbjct: 302 IQRLMGNSGSLNGEVIFTFDGDAAGQKAALKVFRGDNQFSS---QTYVAVEPTGLDPCDL 358 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 + + G EA + + +PL ++ + + Q DL DGR A PL++ + ++L Sbjct: 359 LMQRGPEAVRELVARRIPLYRYVMENTVSQFDLDRADGRVAAIRAAAPLVTSIRDQSLVD 418 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVSRP---VPQLKR----------------TT 450 +EL +G D + + VP + + Sbjct: 419 GYLRELSQVVGTDVDLVRREVSHTRRQHRSEPQLTIVPPPEPQQGSGIPWPDPADVSLSA 478 Query: 451 MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGT 510 R + L +Q+P+L +++ + P E V T ++ E Sbjct: 479 ERGFLKLALQHPDLFNEEWDQVEVEDLRHPAYQAVFEAVLAVPRGQDRWTEKVSEA-TPD 537 Query: 511 NNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLE 570 LE + + + + + + L +R + + +R Sbjct: 538 PQVKQLEVALLVEPVLREEPDRDYAEAYAARVRLLSITDDIANLKSRLQRTNPNQ-DRKL 596 Query: 571 LWTLNQELA 579 + +L Sbjct: 597 YNAMFSDLV 605 >UniRef50_D1B4H3 DNA primase n=2 Tax=Campylobacterales RepID=D1B4H3_SULD5 Length = 552 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 158/565 (27%), Positives = 259/565 (45%), Gaps = 19/565 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I +L R DIV++I + ++LKK G N+ CPFHN+ +PS V+ KQ YHCF Sbjct: 1 MIDKTSIENLKQRLDIVEVIGSYLELKKNGANYKCVCPFHNDTSPSLVVSPSKQIYHCFA 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G++I F+M Y+KL + E++E+LA M N + + +G + R LM+ L Sbjct: 61 CGAGGDSIKFVMEYEKLSYPESIEKLANMVNFSLTYTTQNGAQKENRK-------LMENL 113 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 N FY + L + ++ A+ YL +RG+S +I +F IG+AP + + + I Sbjct: 114 NAFYVKELDKHLS--AKNYLSQRGISEAMIEKFEIGYAPSSFSTL-DFLSKHAYTMSEAI 170 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 + G+ + + Y RF ERV FPI +++GFGGR L N KY+NSP+T F+K + Sbjct: 171 EYGVAGIGENNQPYARFIERVTFPIYAPSNKLVGFGGRTLSNHPAKYVNSPQTKHFNKSQ 230 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYG A++ + L++ EGY+DV+ L Q G +AVA+LGT+ T +H+ L+ R Sbjct: 231 LLYGYPLAKETIFKRKALIITEGYLDVIMLHQAGFTHAVATLGTALTHEHLPLISRGDPE 290 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 VI YDGD AG +AA +A + G + G DP +V+K +A Sbjct: 291 VIVAYDGDEAGINAALKASMLLSQHALRGG---VVLFSQGMDPADMVQKGLLDALNHLFR 347 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 + P F ++ + +L P + A+ + +P + ++ L +LG+ Sbjct: 348 KPQPFVEFALERMVKKHNLKDPLSKQNALEEAMAYLKTLP-QAVQESYTGLLSERLGLHH 406 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLG 483 + + R + +I ++ P L V + K Sbjct: 407 NLVKIQTHKPKRLEKKERVFEDM---LELTIIKTILSEPSLIDTVLDTIDSSMFKTHQEE 463 Query: 484 LFRELVNTCLSQPGLTTGQLLEHYR-GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 L+ P L +L E + +S + E L++ Sbjct: 464 FML-LLENQREHPKLRRIELWEDIKIYDEKELIASMISFLYHYYSEKFQEIRSARELSYE 522 Query: 543 FDSLLELRQEELIARERTHGLSNEE 567 L + +E + + + L E Sbjct: 523 KKQFLIRKIQEKMMKLKQGELVPYE 547 >UniRef50_B8G2V7 DNA primase n=3 Tax=Chloroflexus RepID=B8G2V7_CHLAD Length = 655 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 165/637 (25%), Positives = 271/637 (42%), Gaps = 71/637 (11%) Query: 8 VFINDLLARTDIVDLI-DARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCG 65 I+D+ A DIVDLI V L++ G++F CPFH N +TP+F V + Q ++CFGC Sbjct: 2 SVIDDIKANIDIVDLINSMGVGLRRSGRSFVGFCPFHPNTRTPAFYVYPDTQSFYCFGCH 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G DF+M ++F E +E LA + + E + + E +R L ++ Sbjct: 62 AAGTVFDFVMRKQGIDFKEALELLAERAGIRL--EPKNDAQRQEDARRARLLEINGIAAR 119 Query: 126 FYQQ-SLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG-GNPENRQSLI 183 ++ L R Y+ +RG++ + I F IG++ W ++ + + +I Sbjct: 120 YFNYVLLNLSRGEPGRAYVARRGINQDAIDAFQIGYSLDEWGHLFSYLHDKKGYSVEDII 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 AG+ + ++G YDRFR R++FPIR+ RG VIGFGGR LG++ PKYLN+PET +F K Sbjct: 180 AAGLAIPGERG-PYDRFRNRIIFPIRNVRGEVIGFGGRALGDEQPKYLNTPETPLFKKSE 238 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+ NR +VVEGY+DV+ QYG VA LGT+ + HI L R T+N Sbjct: 239 VLYGLDLARDAIRATNRAIVVEGYVDVITAHQYGFRNVVAPLGTALSKAHINQLKRLTDN 298 Query: 304 VICCYDGDRAGRDAAWRALETA------------------LPYMTDGRQLRFMFLPDGED 345 V D D AG+ A R LET + + + +R + LP G D Sbjct: 299 VYLALDADAAGQKATLRGLETIRTTGEEEGEGRMVTTAQGIVRLENDVTIRVIRLPAGRD 358 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD ++ + ++ +EQA P+ F + +D+ P + + +PL+S++ Sbjct: 359 PDEVIAAD-PNLWQQLVEQAAPVMDFYLEAYTAGLDMHDPIQQRQAIERIIPLLSEL-DG 416 Query: 406 TLRIYLRQELGNKLGILDDSQLERLMPKAAESGVS----------------------RPV 443 + + G+ + ++ L + + + P+ Sbjct: 417 AAQRVYVARVEQITGVRSELIVDLLRARVQPARRNDRSRNKRPLLRPEEPPLPPTPSPPL 476 Query: 444 PQLKRTTMRILIGLLVQNPELATLVPPLENLDENK-LPGLGLFRELVNTCLSQP------ 496 + +R T L+ L ++ P + + L + LF V L +P Sbjct: 477 DERRRKTEAYLLALALRYPSVNIAIEKLLEEYHARCREAGELFGAGVEDLLEEPLHQAIW 536 Query: 497 --------------GLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHM 542 + +E L + + D + Sbjct: 537 QAYLATPLDQRPTDQESLQAWIETLGEPLTGGAKPLLELLERRPDDVRFRHEAEQCARIL 596 Query: 543 FDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 + + R R R + EE + +EL+ Sbjct: 597 RKAQVMERIRRYNERLRE-LDNEEEMERILHHLRELS 632 >UniRef50_C9PY41 DNA primase n=8 Tax=Prevotella RepID=C9PY41_9BACT Length = 660 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 154/649 (23%), Positives = 272/649 (41%), Gaps = 78/649 (12%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I R I + +IVD++ V L+K G N+ CPFHNE+TPSF V+ + HCFG Sbjct: 1 MIDRATIEKIQEAANIVDVVSEFVTLRKAGANYKGLCPFHNERTPSFMVSPARGICHCFG 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG G + F+M ++++ + E + LA +++E+ S + E+++R++++ + + Sbjct: 61 CGKGGTPVSFIMEHEQMTYPEALRWLANKYHIEIKERELSDDERREQNERESMFIVNEWA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 ++ +L V A QY RG ++I +F +GF + + + N Sbjct: 121 AKHFEDTLHTNVDGLAIGMQYFRSRGFRDDIIRKFRLGFDLNDRELLARTAIDKGYNVDF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ D GR DRF RV+FP G+V+GFGGR+L T KY+NSP++D Sbjct: 181 LVKTGLCYRTDDGRYVDRFAGRVIFPWFGVSGKVVGFGGRLLDTRTKGVQQKYVNSPDSD 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK +LYG+++ ++ A+ + + +VEGY DVV++ Q G+ VA+ GT+ + I L Sbjct: 241 IYHKDHELYGIFQGKKAIAKEDCVYMVEGYTDVVSMHQCGVENVVANSGTALSVHQIHTL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+N++ YDGD AG AA R + L +G ++ + PDG+DPD+ RK E Sbjct: 301 HRFTSNIVLLYDGDAAGIHAALRGTDMLL---AEGMNVKVLLFPDGDDPDSFARKHNAEE 357 Query: 358 FEARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 F + + F L+ V + P R+ + + +S +P + LR + Sbjct: 358 FRQYIADNQTDFIQFKTRVLLDGV--TDPTRRSEAISSIVQSVSVIPDQILRDTYLHDCS 415 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT-----------------------MRI 453 +LG+ + + + + ES R + R+ Sbjct: 416 QRLGVAETTLINSMNRYIRESRERRSTEASRAVQEAVEATPRPTIQTVTPLQQAAKVERM 475 Query: 454 LIGLLVQNPE-----------------LATLVPPLENLDENKLPGLGLFRELVNTCLS-- 494 L+ +V+ E + + + + LF ++ Sbjct: 476 LVEQVVKYGERIVLRNVEDENGNLLNLTVAQFIQYDFMQDELVFQHPLFNRILQEAAERS 535 Query: 495 -QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFT----------------- 536 P + H+ + +L M K + Sbjct: 536 VHPDFKSEPYFVHHEDIEVSKLATELCMDPYQYLKLKQPEPIHPLDEEEKRLKEKEKEEE 595 Query: 537 ------DSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 L +E R + L E+ ++L +++ Sbjct: 596 LRQRTVHLLLDFRLDYVEHRLKTLQTEIAQAASEPEKLMQLMAEFKDMQ 644 >UniRef50_B8HS85 DNA primase n=9 Tax=Cyanobacteria RepID=B8HS85_CYAP4 Length = 690 Score = 469 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 168/573 (29%), Positives = 274/573 (47%), Gaps = 27/573 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I + TDIV+++ V L+K G++F CCPFH +K+PSF+V+ KQFY+CFG Sbjct: 5 RLHPDTIEQVRQATDIVEIVSEYVVLRKAGRDFSGCCPFHEDKSPSFSVSPAKQFYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMD 121 CGA GNAI FLM K F E V ELA + + V + ++R R+ LY+++ Sbjct: 65 CGAGGNAIKFLMEIGKRSFSEVVLELAQKYGVPVKTLQDTEKQDLQRKLSLREQLYEVLA 124 Query: 122 GLNTFYQQSLQQPVATSARQYLEK-RGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 FYQ +L+QP A QY++ R LS I F IG+AP GW + Sbjct: 125 LTCNFYQHALRQPQGYHALQYVQAARQLSEATIQEFQIGYAPAGWQVLYGYLVEQKQYPV 184 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + + AG++V G YDRFR+R++ PI D + RV+GFG R L N+ PKYLNSPET++F Sbjct: 185 ELVEQAGLIVPRKGGGYYDRFRDRLIIPIHDLQSRVVGFGSRTLTNEEPKYLNSPETEVF 244 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +KG+ L+GL +A+ A+ ++ +VVEGY DV+AL GI VA++GT+ + + ++ L R Sbjct: 245 NKGKILFGLDKARGAIAKADQAVVVEGYFDVIALHAAGIKNVVAAMGTALSQEQMRQLLR 304 Query: 300 AT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLVRKEGKE 356 +I +D D+AG AA RA+ G QLR + +P+G+D D +++ Sbjct: 305 YCESKQIILNFDADKAGAKAAERAIGEIEDLAYRGEVQLRVLNIPNGKDADEYLKEYSPN 364 Query: 357 AFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 ++ ++QA + + DL D ++ + L+ +P +LR + Sbjct: 365 DYQTLIDQAPLWLNWQIERALVGQDLRQADQFQQVIQKMVQLLGNLPNASLRTHYIHYCA 424 Query: 417 NKLG--------ILDDSQLERLMPKA---AESGVSRPVP-QLKRTTMRILIGLLVQNPEL 464 L L+++ ++ + RP L+ L+ + + P Sbjct: 425 GLLSQGDARLALQLEEALRSQVRGQRWHGRSQKWQRPADFTLREAAEAQLLRIYLHCPPY 484 Query: 465 ATLVPPLE---NLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSM 521 + L+ + L+R+++ Q + L+ Sbjct: 485 RQDIHNALSQRELEFSLSHHRFLWRQILVVEEQHTPPPDEQ-----GQPPHPELAPGLAE 539 Query: 522 WDDIADKNIAEQTFTDSLNHMFDSLLELRQEEL 554 D I F+ + +F + + +L Sbjct: 540 LDLITALQDLCTDFSQEMQQVFHLIQLDEKTQL 572 >UniRef50_A6Q1G7 DNA primase DnaG n=7 Tax=Epsilonproteobacteria RepID=A6Q1G7_NITSB Length = 552 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 163/563 (28%), Positives = 258/563 (45%), Gaps = 20/563 (3%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + I L DIVD+I ++LKK G N+ A CPFH E TPSF V+ KQ +HCFG Sbjct: 10 MIDQNSIEQLKNIVDIVDVIGNYIELKKAGSNYKALCPFHQEDTPSFVVSPSKQIFHCFG 69 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA G+AI FLM Y+KL + E +E+LA M+N + + L++ ++ + Sbjct: 70 CGAGGDAIKFLMEYEKLSYPEAIEKLAGMYNFSLQRIGS-------KESSSNLFKALESI 122 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 N Y++ L A YL++RG+++ I +F +G+AP G + + Q I Sbjct: 123 NRLYKKELFS--KKKALDYLKQRGVANNSIEKFELGYAPEGNTQI-QYLKKEFIPLQDAI 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 G+L D GR Y R ER+ FPI G ++GFGGR + N KYLNSPET +FHK + Sbjct: 180 QTGILSQ-DSGRVYARLVERITFPIYSPNGALVGFGGRTITNHPAKYLNSPETKLFHKSK 238 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYG + A+Q+ + L+V EGY+DVV L Q G AVA+LGT+ T H+ LL + Sbjct: 239 ILYGYHLAKQEIYKKKELIVCEGYLDVVMLHQAGFQNAVATLGTALTPSHLPLLRKGEPR 298 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 VI YDGDRAG +AA +A + +G + +DP +V+K + + Sbjct: 299 VILAYDGDRAGIEAALKASKMLTKADIEGG---VVIFTQDQDPADMVKKAQLQELQRLFA 355 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 + +P F+ + + D+ P + + + + + L+ ++ L L IL Sbjct: 356 KPIPFVEFVLEKTVQKYDIKNPREKEKALFEGIDFLKTL-SPLLQEEYKEYLAALLNILP 414 Query: 424 DSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLG 483 + K + + + +I ++ P ++ + + Sbjct: 415 SKIVLHPQQKKDVNYTMEVHDPKELS----IIKTMLTKPHTVDIILDIIDASHFTYHQEE 470 Query: 484 LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMF 543 L N P + + L E +L ++ + ++ Sbjct: 471 FELTLQNRV-DHPKIRSILLNEDILVFEEEHIRSELLVFLIKYYEQKIQEVVKGDFPFNQ 529 Query: 544 DSLLELRQEELIARERTHGLSNE 566 S L + +E I R + L E Sbjct: 530 KSFLIRKYKENIKRLKEGELIIE 552 >UniRef50_A6WDD6 DNA primase n=2 Tax=Actinomycetales RepID=A6WDD6_KINRD Length = 629 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 165/618 (26%), Positives = 261/618 (42%), Gaps = 42/618 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAGRI + + R + +++ +V L+ G +F CPFH+E+TPSFTV + Sbjct: 1 MAGRIHPDDLQAVKERVRLDEVVGEQVALRSGGVGSFKGLCPFHDERTPSFTVRPVTGRW 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEA----GSGPSQIERHQRQT 115 CFGCG G+AI+F+M D L F + VE LA +++ + + + QRQ Sbjct: 61 RCFGCGESGDAIEFVMRIDGLGFADAVERLAQRAGVQLRYVDDGGRSTQRPASDAGQRQR 120 Query: 116 LYQLMDGLNTFYQQSLQQP-VATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGG 174 L ++ FY Q L P A +AR +L +RG S E ARF +GFAP D +L++ Sbjct: 121 LLEMHRVAEEFYGQQLAAPGPAETARGFLAERGFSREDAARFGVGFAPNTGDALLRQLRA 180 Query: 175 NPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND---TPKYL 231 + L+ +G+ +G YDRFR R+++PIRD G + FG R L +D KYL Sbjct: 181 KGFGEEELVTSGLAGQGQRG-LYDRFRGRLVWPIRDVGGHTVAFGARRLFDDDRIEAKYL 239 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPET ++ K + LYGL A+++ + R++VVEGY DV+A G+ AVA+ GT+ Sbjct: 240 NSPETPVYKKSQALYGLDLAKREISRTKRVVVVEGYTDVMACHLSGVGTAVATCGTAFGE 299 Query: 292 DHIQLLFR------ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGED 345 DH +++ R + V+ +DGD AG+ AA +A E + Q P G+D Sbjct: 300 DHARIVQRMLGEADGSAEVVFTFDGDAAGQKAALKAYELDQRFSA---QTYVAVAPAGQD 356 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 P L G+ A +E +PL F S + + DL++ GR A P++ + Sbjct: 357 PCELRLSAGEAAVAQLVEGRVPLFEFAIRSTIERFDLNSDAGRLAALDAAAPIVGAIRDR 416 Query: 406 TLRIYLRQELGNKLG-ILDDSQLERLMPKAAESGVSR------------------PVPQL 446 L+ L G + + L+R+ + + Sbjct: 417 GLQQRYAINLDRWTGFLDERFVLDRVRAHSGARPAQQPGRPAAAVAPAPPRLPAADPRDP 476 Query: 447 KRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLS-QPGLTTGQLLE 505 R ++ ++Q P V D PG + V L Sbjct: 477 VAQLERQVLSCVLQAPWAVADVFDSLEADAFGAPGHRAVHDAVTAAGGPGEAPQGPAWLA 536 Query: 506 HYRGTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLEL---RQEELIARERTHG 562 + + E+ + +L+ R R Sbjct: 537 RVLDYADGPVAGLVDELAASDLPVSNEEELERWGRQLVAALVGQSATRAVADARRTLQRL 596 Query: 563 LSNEERLELWTLNQELAK 580 + E ++ EL + Sbjct: 597 DPTSQAEEYAAVSAELFR 614 >UniRef50_A3K3B5 DNA primase n=4 Tax=Rhodobacterales RepID=A3K3B5_9RHOB Length = 675 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 181/628 (28%), Positives = 290/628 (46%), Gaps = 61/628 (9%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQ----GK-NFHACCPFHNEKTPSFTVNGEKQFY 59 +P F++++ R + D++ +V K+ GK + A CPFH+EKT SF V+ K +Y Sbjct: 3 LPTGFLDEIRNRLSLADVVGRKVLWDKRKSQPGKGDLWAPCPFHHEKTASFHVDDRKGYY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC G+AI F+ + + F+E +E LA +E+P ++ + +R L ++ Sbjct: 63 YCFGCHEKGDAISFVQKTENVGFMEAIEILATEAGMEMPAR--DPQAKQKADRRTILGEV 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ F++ L+ AT AR YL KRGL RF IGFAP GWDN+ G + Sbjct: 121 MEQAVQFFRFQLKTQAATDARAYLAKRGLDAGTQERFEIGFAPAGWDNLRLALTGKGVSV 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLG-NDTPKYLNSPETD 237 + L+ G+ T+D+GR YD FR R+MFPIRD RGR I FGGR + +D KYLNSPET+ Sbjct: 181 EHLVACGLSKTSDKGREPYDVFRNRIMFPIRDARGRCIAFGGRAMDPDDNAKYLNSPETE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F K R LY L A++ L+V EGYMDV+AL++ G AVA LGT+ T + + + Sbjct: 241 LFDKSRNLYNLRAAREATGRGQPLVVAEGYMDVIALSEAGFKGAVAPLGTAVTENQLHAM 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + I DGD+AG AA+R ++ ALP + G+ LRF +PDG+DPD L+R +G +A Sbjct: 301 WRLSPEPIIALDGDKAGLRAAYRVIDLALPLLEAGKGLRFALMPDGKDPDDLIRSDGPDA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL------ 411 + ++ A+P+ L+ +P+ RA L + + +V +LR + Sbjct: 361 VQTCLDAALPMVDLLWQQETEGRSFDSPERRAALDKVLRERVQRVKDPSLRRHYGEAVRE 420 Query: 412 -RQELGNKLGILDDS-----------------------QLERLMPKAAESGVSRPVPQLK 447 +L N+ G+ + + P Sbjct: 421 LLDKLYNRAGVQPAEPWNGGNGGGFSGGFSGGFAGGFSGKGKGARGRRKWNAPEPPSPTA 480 Query: 448 RTTM--------------RILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCL 493 + +M I++ +L +P L + P L R+++ Sbjct: 481 KASMLVARGEDAEVVMRQEIVLAILYHHPTLIEAFDGQLEKLTPRDPDLAALRDVLLDMA 540 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEK--LSMWDDIAD---KNIAEQTFTDSLNHMFDSLLE 548 +P +E L +++ I K++A T + L + Sbjct: 541 DRPERLADAAMERIGAGWLETLLAARHIAVVPCIRSQGAKDLARMTVAEELAKLEAY--- 597 Query: 549 LRQEELIARERTHGLSNEERLELWTLNQ 576 + + + W L + Sbjct: 598 HGWQAELREAEEDLDDLADEALTWRLAE 625 >UniRef50_Q07SS4 DNA primase n=14 Tax=Alphaproteobacteria RepID=Q07SS4_RHOP5 Length = 688 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 187/626 (29%), Positives = 290/626 (46%), Gaps = 67/626 (10%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R F++DL AR + D++ RVKLKK G+ + PF EKTPSF VN EKQ + F Sbjct: 21 RFTPQFLDDLKARLMVSDVVGRRVKLKKSGREWKGLSPFQQEKTPSFFVNDEKQAWFDFS 80 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 G +G+ DF+M + ++F E VE LAA+ + +P + + + R++LY++M+ Sbjct: 81 SGKNGSIFDFVMQTEGVDFPEAVERLAALAGMALP--QATPDAARQERHRKSLYEVMELA 138 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ ++L AR YL R ++ +F +GFAP + + G + ++ Sbjct: 139 AAFFTETLAARGGARARGYLADRAIAPATQVKFRLGFAPADRFALKEHLGKHGIPVSDMV 198 Query: 184 DAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDIFHK 241 +AG+L+ D YDRFR+RVMFPI D RGRVI FGGR + D P KYLNSPET +FHK Sbjct: 199 EAGLLIAGDDIPVPYDRFRDRVMFPITDIRGRVIAFGGRAMEKDVPAKYLNSPETPLFHK 258 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G LY L A+ + L+VVEGY+DV+A++ G VA LGT+ T + +QLL++ Sbjct: 259 GDNLYNLASARGAAHQGASLVVVEGYVDVIAMSAVGYAATVAPLGTALTENQLQLLWKMA 318 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + I C+DGD+AG+ AAWRA + ALPY+ G+ LRF LP+G+DPD L + G+ A + Sbjct: 319 DEPILCFDGDKAGQKAAWRAADLALPYLAPGKSLRFALLPEGQDPDDLAKLGGRAAVDEV 378 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL-- 419 + A PL+ L++ +TP+ RA L L + + E +R Y RQ+LG +L Sbjct: 379 IGAARPLADVLWSREHGAGSFATPERRAALEARINELTNGIRDEVVRRYYRQDLGERLRQ 438 Query: 420 --------------------------------------------------GILDDSQLER 429 GI + Sbjct: 439 AFAPQGGFGGNRNFQGRRGDSPGGFVPRGPFQPGGGRPQPRGGRNAGAMTGIALSRLPYQ 498 Query: 430 LMPKA-AESGVSRPVPQLKRTTMRILIGLLVQNPELA-TLVPPLENLDENKLPGLGLFRE 487 + A S + R +++ L+ +P L + + L+ L Sbjct: 499 VASPELAASPIMRGQRSAISRREALILQTLINHPWLLHDRLEQVAALELAHPEAHRLRAA 558 Query: 488 LVNTCLSQPG------LTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAE--QTFTDSL 539 ++ + +G+L L+++ D A+ D L Sbjct: 559 IIAAFANDHHHADDAAEQSGRLRADLEAMGLTEQLQRVERSITTKDVWGAQPGAAAEDVL 618 Query: 540 NHMFDS-LLELRQEELIARERTHGLS 564 + L + L+ + L+ Sbjct: 619 STWQQLVALHRQWHSLLRELKDAELA 644 >UniRef50_B0VJJ5 DNA primase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VJJ5_9BACT Length = 580 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 165/587 (28%), Positives = 277/587 (47%), Gaps = 29/587 (4%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 ++ + I+ + DIVD+I + LK+ G NF CPFHN+ PS V+ KQ + CF Sbjct: 7 KMDQNLIDQIRRANDIVDVIQGYLPLKRVGSNFRGLCPFHNDSRPSLYVSQSKQIFKCFA 66 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CG GN I F+ +++KL F+E V++LA ++VP + ++ +R+ L + Sbjct: 67 CGKAGNVIGFVADFEKLTFIEAVKKLAQRAGIQVPEYEKT---KVVNTKREQLLSVYKSA 123 Query: 124 NTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 F+ SL + YL+KR S E +G+A +L + L Sbjct: 124 AEFFTSSLF-AFGQNVLDYLKKRSFSPETAKELQLGYALNSEKALLNHLLKEGYSVSLLK 182 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT--PKYLNSPETDIFHK 241 D+G+ N G D F++R+MFPI + G VI FGGR+L KY+NSP T+++ K Sbjct: 183 DSGLFG-NYGGGLTDLFKDRLMFPIHNSLGEVIAFGGRILEPKEGVGKYINSPGTELYTK 241 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 G++LYGLY+ + + ++ ++ EGY D + L + G +VASLGT+ T D I LL R Sbjct: 242 GKELYGLYKTKYNISKAGTAIICEGYFDFLRLYENGFTNSVASLGTALTEDQINLLARFC 301 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 N +I YDGD AG AA RA L + G ++ LP EDPD+L+ K+GK A + Sbjct: 302 NRIIILYDGDSAGIKAAVRAGLLCL---SRGMEVLIANLPAEEDPDSLILKQGKIAMQEV 358 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 +++++PL FL D A L L + + + L QE+ + G+ Sbjct: 359 VDKSIPLINFLA------TDPRPEQPTAERIELILDALRILKDRIKQELLLQEVSDAFGV 412 Query: 422 LDDSQLERLMP---KAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVP-PLENLDEN 477 + +L + + VPQ + R ++ L +++ E L+ L++ N Sbjct: 413 TVGALNSKLRRSSASVSAESSEQIVPQYESFEERNVLALALKDYESYKLLANDLDSSYFN 472 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 ++ L+ L LL++ +L +L +++ + F D Sbjct: 473 NKRYRQVYNFLITQNLKSEPWEPAALLDNIENNEIKESLAELLF------EDLQQMCFED 526 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNE---ERLELWTLNQELAKK 581 L+ + ++ EE+ + E E+ +L +++ +K Sbjct: 527 CLSGLRIRKVQRDLEEMDRAISKDPKNMELLKEKEKLALKYRQMTRK 573 >UniRef50_B0SHG4 DNA primase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHG4_LEPBA Length = 603 Score = 466 bits (1200), Expect = e-130, Method: Composition-based stats. Identities = 161/578 (27%), Positives = 260/578 (44%), Gaps = 24/578 (4%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + F + I I+ V L++ G+N CPFHNEKTPSF VN E FYHCFGC A Sbjct: 5 QSFKERVRREVSIDSYINRFVPLRRMGRNLVGICPFHNEKTPSFNVNPEGGFYHCFGCKA 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ F+M+Y K++F++++E L+ + + + + +++ LYQ+ + Sbjct: 65 SGDLFRFVMDYQKVDFLKSLEVLSEYSGIPL--VERTKEEEESERKKEALYQISQKALEY 122 Query: 127 YQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAG 186 +Q++L A +YLE RG+ E + F IGF PG+ N+ + G Sbjct: 123 FQKNLNTTAGELALKYLESRGMYAEDLKVFKIGFGLPGFGNLRSELFKTDAEVKLGEQLG 182 Query: 187 MLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKGRQ 244 +L DQ + YD FR R+MFP+ D RGRV+ F GR+LG + KY+NSP + I+ K R Sbjct: 183 LLKRQDQNKDPYDFFRNRIMFPVIDPRGRVVAFSGRILGESEEAKYINSPNSLIYDKSRT 242 Query: 245 LYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNV 304 Y L AQ + ++VEG D + L + GI + VA LGT T H+++L + V Sbjct: 243 FYNLNLAQDSIRKTREAVIVEGVFDAIGLFRKGIEFVVAPLGTGFTEGHVRILKNMADKV 302 Query: 305 ICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARMEQ 364 D D+AG A+RA+ +G ++ +P+G+DP K+ +E Sbjct: 303 YLMMDSDKAGTKGAFRAVNLL---SKEGVVVKVCHIPEGKDPFDYSLHHNKQEIRELLEG 359 Query: 365 AMPLSAFLFNSLMPQVDLST-PDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGILD 423 A P S F+ ++ ++ + + + + ET + +E +LG+ Sbjct: 360 ASPASQFMIREILAGAGPTSLAEEKQAGVKKLFEFLKPMEKETDKQVYLEEGARQLGLSF 419 Query: 424 DSQLERLM-------------PKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 S + K + P R +I +L+QN EL + Sbjct: 420 SSLFQDFRGKPGVTSTPSVVDTKKDRTPQKPGKPSPVLVCERKMIAMLIQNLELFSFADD 479 Query: 471 LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI 530 L +L+ + L L LT ++L R + L ++ AD ++ Sbjct: 480 LLSLEFRDEVSAFFWDYLYTKYLQNENLTAAEILS--REEIPSEYLGMIA-EHFSADVSV 536 Query: 531 AEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER 568 TF + D L + R EEL+ L+ EE+ Sbjct: 537 TPATFRAMFLYHADLLDDARMEELVKEMAKPDLTIEEK 574 >UniRef50_C6XG04 DNA primase n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XG04_LIBAP Length = 648 Score = 466 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 177/620 (28%), Positives = 286/620 (46%), Gaps = 49/620 (7%) Query: 6 PRVFINDLLARTDIVDLIDARVKLKKQGKN-----FHACCPFHNEKTPSFTVNGEKQFYH 60 PR FI DLL I +LI V ++ N + ACCPFH+EKTPSF N K FY+ Sbjct: 4 PRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYY 63 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF C G+ + FL F+E+V+ LAA+ + +P + + L +L+ Sbjct: 64 CFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQ--TDLIRLI 121 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + F+ SL+ YL++RG+ I F +G+AP ++ + + + Sbjct: 122 EVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEE 181 Query: 181 SLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP-KYLNSPETDI 238 +I+AG+L+ D SYDRFR R++FPIR RG+VI FGGR L KYLNSPET + Sbjct: 182 KIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETIL 241 Query: 239 FHKGRQLYG----LYEAQQDNAE------PNRLLVVEGYMDVVALAQYGINYAVASLGTS 288 FHKG+ LY L Q+ + + +++VEGYMDV++L Q G+ V+SLGT+ Sbjct: 242 FHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTA 301 Query: 289 TTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDT 348 T ++LL++ + ++ C+DGD G AA++A++ L ++ G ++ F+ L GEDPD+ Sbjct: 302 LTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDS 361 Query: 349 LVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLR 408 +R GK AFE + +++PL L+ +TPD RA L I+ + + LR Sbjct: 362 FIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLR 421 Query: 409 IYLRQELGNKLGILDDSQLER-------LMPKAAESGVSRPVPQLKRTT----------- 450 Y Q + ++L L + A P +L +++ Sbjct: 422 YYYSQAIRDRLQQLFQKYITEHSGYGRYWKKNARHRDQKGPSQRLMQSSLVKGKLSKKPS 481 Query: 451 --MRILIGLLVQNPE-LATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHY 507 L+ L+ +P L L ++ + L+ L + + Q ++ + Sbjct: 482 LREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQRL 541 Query: 508 RGTNNAATLEKLSMWDD---------IADKNIAEQTFTDSLNHMFDSLLELRQEELIARE 558 L++L A+ Q + +L L RQ+E I ++ Sbjct: 542 CERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKRFRLLSRQKEEIEKQ 601 Query: 559 RTHGLSNEERLELWTLNQEL 578 + E + L L Sbjct: 602 IAQVTAKGEAEKTAILISIL 621 >UniRef50_Q30ZP6 DNA primase n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZP6_DESDG Length = 576 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 146/573 (25%), Positives = 252/573 (43%), Gaps = 26/573 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+G + + +R ++ +L V+L++ G + A CPFH E PSF++N E+ F++ Sbjct: 1 MSGH-DNSAVQAIKSRLNLAELARRYVELRRIGNRWMAPCPFHQETKPSFSINEEEGFFY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGC A G+ IDF + LEF E +E+LA + + + ER R Y++ Sbjct: 60 CFGCQASGDIIDFYSRINGLEFREALEQLAEEAGVTLGQRQADPREEQERKFRSRCYEMY 119 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + ++++LQ R Y+ RG+ E+++ F +G++ W + + Sbjct: 120 ELATKHFRRNLQSAAGAECRSYIADRGIPDEIVSSFELGWSKREWAALSDELQRAGYAPR 179 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPKYLNSPETDIF 239 AG+L +ND GR YDRFR R++FPI++ G+VI FGGR++ D KY+NS ++ I+ Sbjct: 180 DATRAGLLSSNDSGRMYDRFRGRLIFPIKNLSGKVIAFGGRIISSEDQAKYINSSDSTIY 239 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG LYGLY+A++ ++ R L+ EGYMDV+AL Q+G A LGT+ T ++ L Sbjct: 240 KKGDHLYGLYQARRSISQHKRALLTEGYMDVLALHQFGHTNACGVLGTALTEAQVKRLGG 299 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 ++V +DGD GR AA R+ E L G R + +P+GED D+L+ ++G +AF Sbjct: 300 FCSHVDLLFDGDGPGRKAALRSCEMMLV---KGMDCRVVLMPEGEDIDSLLHQQGAQAFR 356 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 E A + +L + + Q+ L + L L Sbjct: 357 ELTESAPDGLEYCIRTLRDSYSPR------EILDWTAAFLRQLDRPDLASFYVTRLAGGL 410 Query: 420 GILDDSQLERLMP-----KAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENL 474 G+ + L + + +R ++ L+ LV+ P + + Sbjct: 411 GLQEADLRASLSSPAGRNRQQRAAGNRVQTGKEKKLEMHLMEFLVRFPHHISNLQARGAE 470 Query: 475 D-ENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQ 533 + ++ +L+ + L Q Sbjct: 471 EVLVSRWARDMWDKLLAFGADEAPNHFS---------EEQKALWIRCRVASPIPAENERQ 521 Query: 534 TFTDSLNHMFDSLLELRQEELIARERTHGLSNE 566 D + + + + + ++A R Sbjct: 522 ELEDLYSKLAELNQKEQSRMMLAALRQLSSDAN 554 >UniRef50_Q6AQ52 Related to DNA primase (DnaG) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ52_DESPS Length = 617 Score = 465 bits (1196), Expect = e-129, Method: Composition-based stats. Identities = 161/597 (26%), Positives = 273/597 (45%), Gaps = 34/597 (5%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + + R DIV +I V+L++ G + CPFH EKTPSF+V +QF+HCFGCG Sbjct: 5 EDVVALIKERADIVQIIGETVELRRSGSRYVGLCPFHGEKTPSFSVTAGEQFFHCFGCGE 64 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNTF 126 G+ + ++M Y L F E ++ LA + + +P S + +R+ ++ L + + Sbjct: 65 SGDVLSYVMKYYALSFPEALKMLAERYGVVLPERKQSAQEKALAEKRKKMFALNEKVAAI 124 Query: 127 YQQSLQQPVA-TSARQYLEKRGLSHEVIARFAIGFAP----PGWDNVLKRFGGNPENRQS 181 Y Q L+ +AR YL +RG+ ++ A + + +AP GW + Sbjct: 125 YGQYLRTNRGAGAARDYLVRRGVGKKISADYGLCYAPSQDVEGWHFLGGHLAKE--ELVL 182 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHK 241 + G++ + G YDRFR+R++FPIRD G++ GFGGR++G PKY+NSPE+ IF+K Sbjct: 183 AAELGLVSAKENGGYYDRFRDRILFPIRDIAGQICGFGGRIIGEGQPKYMNSPESLIFNK 242 Query: 242 GRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRAT 301 L GLY+ ++D ++ VEG D+++L G+ VA LGT+ T +H++L+ R Sbjct: 243 SSLLLGLYQQKEDIRRAGSVVFVEGNFDLISLVGAGVKNVVAPLGTALTREHLRLVKRFA 302 Query: 302 NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEAR 361 + +DGD+AG AA R++ L G + LP+GEDPDT VR+ G Sbjct: 303 EGAVMLFDGDKAGVQAAVRSVPLFLGENLMG---KVSLLPEGEDPDTYVRRHGGRGILEL 359 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +A PL F F +L+ + LS DG++R+ PL+ R + KLG+ Sbjct: 360 LAEASPLPEFAFENLVQEHGLS-LDGKSRVIEGLKPLVQAATSSLQRSVILSHFAEKLGL 418 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKR-----------------TTMRILIGLLVQNPEL 464 S L +P + R + +V +P L Sbjct: 419 DVISLERNLQTGEGGPAQKNVLPSSVPVITPLKQKKTEAVLPLDSVQRRFVQFMVLHPSL 478 Query: 465 ATLVPPLENLDENKLPGLG-LFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW- 522 + + + +F + + L + L + ++ + Sbjct: 479 FDRLVAMGMRNILLGSVGEIIFLHMTSLLRKHRVLEPEEFLGLLPKGVERKVVAEILLKQ 538 Query: 523 -DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSN-EERLELWTLNQE 577 D +A+ + + ++ +LL+ + +++ GL E +L L E Sbjct: 539 GDGLAEGDDPLGELAELEAYLEVALLKKKSNDIL--LSIQGLDQVNELDKLQDLLLE 593 >UniRef50_A9H1N8 DNA primase n=11 Tax=Acetobacteraceae RepID=A9H1N8_GLUDA Length = 619 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 186/536 (34%), Positives = 268/536 (50%), Gaps = 32/536 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA + F+ +L ART I +I R KL + G+N+ ACCPFH EKTPSF V + +H Sbjct: 1 MA--LDPAFLEELRARTPIASVIGRRTKLVRSGRNWKACCPFHGEKTPSFYVYDD--HFH 56 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+ I F+M + F E V ELA LEVP S + + + L ++ Sbjct: 57 CFGCGAHGDVISFVMQSEGRSFPEAVAELAGEAGLEVPR--ASPREREAEQRARGLSDVL 114 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 D + + + L P + YL RGLS E IA F +G++ G +L + + Sbjct: 115 DLVQAAWVRRLHAPEGRAGLAYLRGRGLSDETIAGFGLGWSGDGRGGLLNELAPHGVTPE 174 Query: 181 SLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L AG++ ++ GR + F RV FPIRD+RG ++ FGGR+LG+ PKYLN PET +F Sbjct: 175 MLAQAGLMRVDEDGRPKGELFFNRVTFPIRDRRGSLVSFGGRILGDGQPKYLNGPETALF 234 Query: 240 HKGRQLYGLYEAQQDNAEPN-------RLLVVEGYMDVVALAQYGINYAVASLGTSTTAD 292 K R L+G+ A+ L+VVEGYMDV+AL Q G AVA LGT+ T++ Sbjct: 235 SKRRTLFGMDRARAALRTARPRGAPPVELVVVEGYMDVIALHQAGFPGAVAPLGTALTSE 294 Query: 293 HIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRK 352 ++ L++ I C+DGD AG+ AA +A ETALP + R LRF LP+GEDPD+L+R Sbjct: 295 QMEALWQMAAAPILCFDGDGAGQRAAVKAAETALPLLDINRTLRFCALPEGEDPDSLLRG 354 Query: 353 EGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 +G A A +E A P+ LF+ L V P+ RA + + + + + L R Sbjct: 355 QGSGAVAALLEGARPIGHVLFDLLTQGVRDPGPEQRAAVRRRLVEAAALIADKGLAAEYR 414 Query: 413 QELGNKL--------GILDDSQLERLMPKAAESGVSRPV---------PQLKRTTMRILI 455 L ++ G + ++GVS P + MRIL Sbjct: 415 STLLDRFFETYRRRPGQGKRAGQGGQRGDGRQAGVSWPAGSAPAPFDEAAAAQERMRILT 474 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTN 511 +L+++P + V + P L R V + LT + L+ Sbjct: 475 AILLRHPHILPEVED-AYCRLDLPPALARVRAAVMDLAASGDLTDAKALDRRLDEG 529 >UniRef50_D0LP35 DNA primase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LP35_HALO1 Length = 605 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 155/615 (25%), Positives = 259/615 (42%), Gaps = 50/615 (8%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP ++++ R DIV +I V L+K G+N CPFH+EKTPSF VNG+K+F++CF Sbjct: 2 GLIPEDTVHEIRERADIVAVIGDHVSLRKAGRNHKGLCPFHHEKTPSFNVNGDKRFFYCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS-QIERHQRQTLYQLMD 121 GC G+ F+M Y+ F E E LA+ + +P P+ + +R +R + ++ Sbjct: 62 GCQKKGDVFTFVMEYEGKSFTEAAETLASRFGISIPESRPESPALRRQRGERSRMLEINA 121 Query: 122 GLNTFYQQSLQQPV-ATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 F+ L+ P R YL +RG+ F +G+AP W + + + Sbjct: 122 LATEFFAAVLRDPERGAPGRAYLAERGIDEATANSFQLGYAPDQWRELGEFLERKRVPAE 181 Query: 181 SLIDAGMLVTNDQ-GRSYDRFRERVMFPIRDKRGRVIGFGGRVL---------GNDTPKY 230 G+LV + G YDRFR R+M P+ G V GF GR+L KY Sbjct: 182 LAAKVGLLVKQPRAGGYYDRFRHRLMCPVVMPGGEVAGFSGRLLPSPEQDEDDERKGAKY 241 Query: 231 LNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTT 290 +NSPE+ ++ K R L+GL+ A+ E R ++VEG DV+ + Q+G AVA LGT+ T Sbjct: 242 INSPESPVYKKSRLLFGLHLARDAFREKRRAVLVEGNFDVIHMHQHGFAEAVAPLGTALT 301 Query: 291 ADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLV 350 + I L R + V+ YDGD+AGR A +ALE + ++R LP G DPD+++ Sbjct: 302 DEQIGQLRRLADEVVLLYDGDKAGRAATLKALEAL---VASDTKVRIAALPAGADPDSML 358 Query: 351 RKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY 410 + + +A P + + + + + DGR+ A L+ V T R Sbjct: 359 LTGRVQELAESLTRAQPAIEYFVHDVWTR-SARSADGRSEALDEAARLLVHVTNPTKRDL 417 Query: 411 LRQELGNKLGILDDSQLERLMP-----KAAESGVSRPVPQLK-----------------R 448 + + N + + + + G R + + Sbjct: 418 IIDTIANGMSVSPELVRRAMQRGNQRGDQRNQGRHRDADERRFEQPPPPQPPAAPVQPPP 477 Query: 449 TTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR 508 L+ +L +P+L + E + R++ + + Sbjct: 478 REELNLLAILADHPDLLEVAEDKEVVSFLTDGR---LRDIYFAARQGSSMLSSA------ 528 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIAR---ERTHGLSN 565 + + K + A ++L + R ++L + R G Sbjct: 529 PEDIGPLIAKYVLAGTYASVEDPAHCLDEALQRLRAGRSRTRLQQLQKQAYDARRRGDVA 588 Query: 566 EERLELWTLNQELAK 580 ER + + + + Sbjct: 589 LERRLVGEILKTRRQ 603 >UniRef50_D2NNW9 DNA primase n=2 Tax=Rothia mucilaginosa RepID=D2NNW9_9MICC Length = 686 Score = 464 bits (1194), Expect = e-129, Method: Composition-based stats. Identities = 153/462 (33%), Positives = 231/462 (50%), Gaps = 13/462 (2%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQG-KNFHACCPFHNEKTPSFTVNGEKQFY 59 MAG I + I+++ ARTDI ++I+ V LK G F CPFH+E+TPSF V + Y Sbjct: 1 MAGLIRKEDIDEVRARTDIREIIEGYVSLKSAGIGTFKGLCPFHDERTPSFNVRPQVGSY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ F+M + FVETVE LAA + +E G + E R+ L Sbjct: 61 HCFGCGESGDVYSFVMAMEHTSFVETVERLAARIGYTLHYEGGKPGDRYEAGMRRRLLDA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 F++++L A A+++L RG +F +G+AP GWD++LK Sbjct: 121 HKIAAEFFERNLYSADAQEAQRFLGARGFDPAATRKFGVGYAPRGWDHLLKHLRSQGFTD 180 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETD 237 + L GM ++G YDRFR R+++PIR G IGFG R L + PKYLN+PET Sbjct: 181 EELKATGMFSEGNRG-LYDRFRGRIIWPIRTIAGETIGFGARRLFDDDQGPKYLNTPETQ 239 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K + LYG+ A++D + ++++VEGY DV+A GI AVA+ GT+ HI+++ Sbjct: 240 LYKKSQVLYGIDLAKRDMTKTKQVVIVEGYTDVMAAHLAGITTAVATCGTAFGPGHIKMV 299 Query: 298 FRAT------NNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 R +I +DGD AG+ AA A E ++ Q +G DP L Sbjct: 300 RRMITDDGSGGEIIFTFDGDAAGQKAAMAAFEEDQRFVA---QTFVAVAENGMDPCDLRL 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYL 411 +G A + + PL F +S + + DL+T +GR P+I+ + LR Sbjct: 357 HKGDAAVRSLIASRRPLFEFAIDSTLAKYDLATLEGRVLAMRAIAPIIAGIKDRDLRPAY 416 Query: 412 RQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI 453 +++ +LG+ D + +SR R Sbjct: 417 MRKVSGQLGLELDEIQRAVAYAQNHPKLSRTQQAEAVAAPRY 458 >UniRef50_B5YES1 DNA primase n=2 Tax=Dictyoglomus RepID=B5YES1_DICT6 Length = 577 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 164/583 (28%), Positives = 275/583 (47%), Gaps = 29/583 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G + F++++ R +IVD+I V LKK GKN+ CPFH EKTPSF V+ +K YHCF Sbjct: 2 GLVWEDFVDEVKQRVNIVDVISRYVNLKKTGKNYVGLCPFHQEKTPSFYVSPDKGLYHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCGA G+ FL+NY L F E +EELA LE+P + + + ++ Sbjct: 62 GCGAAGDVFTFLINYRNLTFREALEELAREAGLEIP-----KKEEQISTEANIVLEINKA 116 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 + TFY L + YL+KRG+S E+ +F +G+AP +L+ ++ + Sbjct: 117 VATFYHIYLNSKYGAEGKLYLKKRGISSEIQEKFLLGYAPLNPTLLLRYLEKKGFSKDDI 176 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I A +L D F RV+FPI + RG+VIGFGGR L + PKYLNSPE++ F KG Sbjct: 177 IKAKVLYFVRD-EWKDPFAGRVIFPIVNPRGKVIGFGGRSLTGEEPKYLNSPESEFFSKG 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + LY LY+A++ + ++VEGYMD ++L Q GI VASLGT+ T+ +LL TN Sbjct: 236 KNLYALYQAKESIKKEGEAILVEGYMDAISLHQAGITNVVASLGTAFTSHQAKLLKSYTN 295 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLP-DGEDPDTLVRKEGKEAFEAR 361 VI YD D AG A RAL +G ++ ++ LP D +DPD + K KE F Sbjct: 296 KVILSYDQDSAGYQAGKRALSLLEV---EGIEVYWLSLPKDVKDPDEFIHKYSKEEFLKF 352 Query: 362 MEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIY----LRQELGN 417 ++++ P FL + + + ++ + + + I + ++ + Sbjct: 353 VKESKPSLDFLIENTLS-LPMNFKERLEEIIEILTSSILRSKNILVQQEKIKQYLPLISK 411 Query: 418 KLGILDDSQLERLMPK--AAESGVSRPVPQLKR----TTMRILIGLLVQNPELATLVPPL 471 +LG+ ++ + + + + S S ++ R + ++ L+ + + + Sbjct: 412 RLGVPEEGIQKEIQKRIFSDRSYKSNVKIEITRYFGVSKTEEVLLGLILLGINNSQIKNM 471 Query: 472 ENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIA 531 D + L++E++ G + + L + +S ++ ++ Sbjct: 472 SPEDFS----FPLYQEVLKKWRVWEG-SLEEFLNLWDEDKRVLIDRAISSGEEFINQEDI 526 Query: 532 EQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTL 574 D + ++ LI +E+ + + Sbjct: 527 IPFLWDHFQKLR---IKKEINRLIEELSKLDDPIKEKELMEEI 566 >UniRef50_UPI0001C33841 DNA primase n=1 Tax=cyanobacterium UCYN-A RepID=UPI0001C33841 Length = 649 Score = 464 bits (1193), Expect = e-129, Method: Composition-based stats. Identities = 165/591 (27%), Positives = 276/591 (46%), Gaps = 45/591 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 RIP + ++ R +I ++I V LKK+GKN+ CPFHNEKTPSF+VN +KQ ++CFG Sbjct: 5 RIPSDTLEEIKERANIYEVISEHVVLKKRGKNYVGLCPFHNEKTPSFSVNPDKQLFYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPS--QIERHQRQTLYQLMD 121 CGA GNAI FLM K F + V ELA + + + Q + + LY+++ Sbjct: 65 CGAGGNAIKFLMELKKEPFHQVVLELAKQYKIPIKELESENTKTLQEKISLQDQLYEILA 124 Query: 122 GLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGG-NPENR 179 +Y+ L +P T A YL KR L E I++F IG++P GW+ + + Sbjct: 125 TSANYYEHLLHEPSGTQALDYLINKRRLKLETISKFNIGYSPEGWETLYSYLVEYKKYST 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 L GM+ ++G YD FR R+M PI+D +GR++ FGGR L N PKYLNSPET + Sbjct: 185 DLLEQTGMIKRRNKGNGYYDTFRGRIMIPIKDVQGRIVAFGGRSLNNQEPKYLNSPETAL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 F K + L+ L ++ ++ ++ +VVEGY DV++L + GIN VASLGT+ + ++ L Sbjct: 245 FSKSKILFALDQSYKNIRNLDQAIVVEGYFDVISLHEAGINNTVASLGTTFSKAQLRKLL 304 Query: 299 RAT--NNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLVR--KE 353 R T ++ +D D AG A R + + G QL+ + LP+G+D D ++ + Sbjct: 305 RYTDSKQIVFNFDADNAGIKATQRMITEIESLVYSGQVQLKILNLPNGKDADEFIQFNQN 364 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 E + + A ++ ++ DL D ++ + L+S++ R Y + Sbjct: 365 STEQYYELISNAPLWFSWQIQQILLNKDLKRADHFEKIVKEMIDLLSKLSDYNKREYYIR 424 Query: 414 ELGNKLGILDDSQLE--------RLMPKAAESGVSRPV-----------PQLKRTTMRIL 454 L D + +L A+ + QL + L Sbjct: 425 HCSEVLSQGDARLIPIYLKNFQLQLAKPIAKQTNNEKSGKFTKVNILLEDQLLKEAENNL 484 Query: 455 IGLLVQNPELATLVP---PLENLDENKLPGLGLFRELVNTCLSQ---PGLTTGQLLEHYR 508 + + ++ PE + + +NL + ++ E++ + + QL+ + Sbjct: 485 LKVYLRYPEYRSQISKDLESKNLFFSVQEHRVIWAEILEFEDNHQYDEKIDKYQLIYKLQ 544 Query: 509 GTNNAATLEKL----------SMWDDIADKNIAEQTFTDSLNHMFDSLLEL 549 T ++L ++ + D + SL + + L+ Sbjct: 545 ETIWDSSLTEICINQILNFSELEQHEDNDIERLDLIIKASLIFLEKASLKK 595 >UniRef50_P74143 DNA primase n=19 Tax=Cyanobacteria RepID=PRIM_SYNY3 Length = 635 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 169/621 (27%), Positives = 292/621 (47%), Gaps = 45/621 (7%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 R+ I ++ R DIV++I V LKK+G++ CPFH+EK+PSF+V+ KQ Y+CFG Sbjct: 5 RLHPDTIQEIKQRIDIVEIIGDYVVLKKRGRDHLGLCPFHDEKSPSFSVSPAKQMYYCFG 64 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQ--RQTLYQLMD 121 CGA GNA +FLM K F + +LA + +++ + +++R R+ LY++M Sbjct: 65 CGAGGNAFNFLMELGKRSFTDVALDLARRYQIQIQTLEPAQKQELQRQLSLREQLYEIMA 124 Query: 122 GLNTFYQQSLQQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRF-GGNPENR 179 FY +L QP A YL +KR LS I F +G+AP GW+ + + Sbjct: 125 VAAGFYHHTLFQPQGQEALTYLDQKRCLSSATIQEFQLGYAPAGWETLYRYLVEQKRYPV 184 Query: 180 QSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDI 238 ++ AG++ G YD+FR R+M PIRD +G+ I FG R LGND PKYLNSPET + Sbjct: 185 AAVEQAGLIKARQSGTGYYDQFRHRLMIPIRDVQGKTIAFGSRTLGNDEPKYLNSPETPL 244 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK + L+GL +A+ + + ++VEGY DV+AL + GI VA+LG + + D +Q L Sbjct: 245 FHKSKTLFGLDQAKTAIQKVDEAILVEGYFDVIALHESGIKQTVAALGIALSRDQVQSLM 304 Query: 299 RA--TNNVICCYDGDRAGRDAAWRALETALPYMTDG-RQLRFMFLPDGEDPDTLVR--KE 353 R + +I +D D+AG +A RA++ P + G LR + LP G+D D + E Sbjct: 305 RFSQSKQIIFNFDADKAGINATQRAIQEIEPLVYSGQVNLRILNLPAGKDADEFIHSSAE 364 Query: 354 GKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQ 413 KE ++ ++QA + L+ Q +L P +++ + ++ ++ + R Y Q Sbjct: 365 NKEIYQTLVKQAPLWVDWQIQQLLKQKNLKDPLDFEQVARGMVDILKRLTDQNKRAYYLQ 424 Query: 414 ELGNKLGILDDSQL--------------ERLMPKAAESGVSR-PVPQLKRTTMRILIGLL 458 G L D + +R + ++ P L +L+ + Sbjct: 425 LCGEILSQGDSRLISLQVNNLSSQLTYGDRPGKNGSRHWQAKDPTSSLLEKAEALLLKIY 484 Query: 459 VQNPELATLVPPLENLDE--NKLPGLGLFRELVNTCLSQPGLTTGQL--------LEHYR 508 + P+ + + ++ L + ++ L + L + Sbjct: 485 LHCPQERPTIDQILTENDLLFSFAHHRLLWQKIDQVREYFNLDSDPDNQLPLLVQLAYLE 544 Query: 509 GTNNAATLEKLSMWDDIADKNIAEQTFT--DSLNHMFDSLLEL-------RQEELIARER 559 + ++E L + + +++ +++ M E + ++L R + Sbjct: 545 QEGDFNSVESLFQLTETSAEDLFRANLRIPEAIAIMEKVPWESYQKHCFGKLQQLDPRTQ 604 Query: 560 THGLSNEERLELWTLNQELAK 580 + + +QE+ + Sbjct: 605 AEDFRYYQ-EQWQKAHQEIQR 624 >UniRef50_A6C4Z6 DNA primase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C4Z6_9PLAN Length = 636 Score = 463 bits (1192), Expect = e-129, Method: Composition-based stats. Identities = 163/626 (26%), Positives = 279/626 (44%), Gaps = 49/626 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ + F + RT +V+L+ V+L G++F CPFHN+ PS V +++ + Sbjct: 1 MSPGFDQNFKELVRQRTSLVELVSESVQLIPNGRDFKCLCPFHNDHNPSLVVYPDRETWR 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPF--EAGSGPSQIERHQRQTLYQ 118 C+ C G+ +++ YD +EF E ++ LA +LE+P +G + ++ +L+ Sbjct: 61 CWVCNTGGDCFEWVQKYDDVEFFEALKILAERAHLEMPQLARQSNGAPRSNIVEKTSLFD 120 Query: 119 LMDGLNTFYQQSL-QQPVATSARQYL-EKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNP 176 +M + L AR+YL E RG + E I +F +GF P W ++ R G+ Sbjct: 121 VMKWAEQQFHDCLMNTREGEMARRYLMEDRGYTEETIQQFRLGFHPNDWQWLVNRSRGH- 179 Query: 177 ENRQSLIDAGMLVTNDQGRSY-DRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYL 231 L +A ++ + Y D F RVMFP+RD+R RV+ FGGR+L KY Sbjct: 180 YPESLLSEARLIFKKEGHSRYSDYFVNRVMFPVRDERKRVVAFGGRILPGSAAEGIAKYF 239 Query: 232 NSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTA 291 NSPE+ IF K + L+GL E++Q E ++VVEGY D + Q+G+ AVA+LGT+ T Sbjct: 240 NSPESIIFTKSKLLFGLDESRQTIRETETVVVVEGYTDCITAHQFGVTNAVATLGTALTE 299 Query: 292 DHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVR 351 H+ L R V+ +DGD AG+ AA R+ ++ LR + LP G+DP + Sbjct: 300 THVSYLKRLARKVVLVFDGDTAGQQAAERS---LTKFIAQEVDLRILTLPAGKDPAEFLE 356 Query: 352 KEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPG---ETLR 408 ++G E + + A F N + + L + DG+ R+ L L++ P + Sbjct: 357 EQGAEQLKQLIADAPEAWNFKLNVCVQKFGLESIDGQHRILEEMLELLASSPNLTGKIRE 416 Query: 409 IYLRQELGNKLGILDDSQLERLMPKAAESGVS--------------RPVPQL-------- 446 + ++L ++LG+ + +RL + S RP Sbjct: 417 DIILRKLADRLGLNESVVRKRLSEVKQKKSPSLNTNLSSSESYSTPRPTDTSGNFQEADN 476 Query: 447 ---KRTTMRILIGLLVQNPELATLVPPLENLDENKLPGLGLFREL-VNTCLSQPGLTTGQ 502 L+ ++ PE T + L + + K P L +L V+ L + Sbjct: 477 STKDNQLESELLEIIFVYPECVTRIQQLISPENLKNPQLRFLYQLCVDLTEEGLVLDINR 536 Query: 503 LLEHYRGTNNAATLEKL-------SMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELI 555 +L+ + + K+ ++ + D + L H +L + E Sbjct: 537 ILDRIADPDLKQLVVKIDAHAREKAVHAKLLDDPAPLEGIPHFLKHSIKNLKWREEREHH 596 Query: 556 ARERTHGLSNEERLELWTLNQELAKK 581 + + N + L + +EL +K Sbjct: 597 EKTKGLLFQNAQNQSLNSDAKELLRK 622 >UniRef50_Q0EWY0 DNA primase n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWY0_9PROT Length = 580 Score = 463 bits (1191), Expect = e-129, Method: Composition-based stats. Identities = 202/582 (34%), Positives = 296/582 (50%), Gaps = 20/582 (3%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA F++++LARTDIV+LI V+LKK G N CPFH+EK+PSF+V+ +KQ Y+ Sbjct: 1 MAH-FQPSFLDEVLARTDIVELIGRHVELKKSGSNLMGLCPFHHEKSPSFSVSADKQLYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G A FLM +D F E VE LA LEVP E R +R Y+L+ Sbjct: 60 CFGCGQGGGAFQFLMEHDGYAFPEAVEYLAEKAGLEVPQETKQDHGDEVRQKRD--YELL 117 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + ++L + A YL++RGL ++I + +G+APPG+ + + FG + Sbjct: 118 ERAAQAMNKALHGELGGKAAAYLQQRGLPADIIRDYMLGYAPPGYGFMKRLFGSDSATNS 177 Query: 181 SLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLG--NDTPKYLNSPETDI 238 L G++ + G DRFR+R+MF IRD+RGR++GFGGRVLG KYLNSPET Sbjct: 178 RLETVGLVFKGEHG-YGDRFRDRLMFAIRDRRGRIVGFGGRVLGSGEGEAKYLNSPETPY 236 Query: 239 FHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLF 298 FHK LYG E + + +L+VVEGYMDV+ALA +G+ +A LGT+ I+ +F Sbjct: 237 FHKSDLLYGFSEHRDTIRKSKQLVVVEGYMDVLALASHGLKIGLAPLGTAIGERQIREIF 296 Query: 299 RATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAF 358 R + + C+DGDRAGR AAWRALE LP + F++LP+GEDPD+L+++EG EAF Sbjct: 297 RLCDTPVFCFDGDRAGRQAAWRALERMLPLLKAELMPAFLYLPEGEDPDSLLKQEGGEAF 356 Query: 359 EARM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 R+ E+A P+ + + + +GRAR++ A +++ + L RQE Sbjct: 357 ARRLKEEAKPVLE-TWLHGLKLLAGQGAEGRARMAKKADTMLAAMTDSYLMQAWRQEAER 415 Query: 418 KLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDEN 477 GI + + A +R L R + GL+ + L + Sbjct: 416 SSGIALQHRRRAAVTDVASEPAARADIVLNPVEDRFMAGLMQKPARFLQLSGAAMEFFVD 475 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 L+ + T + R +S W + A + E Sbjct: 476 NPAIHALYSRAFSMQADAETETIDIARQLIRECPADQ--NMISRWINQATVHDIE----- 528 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELA 579 LL++ ++ R R GLS E ++L +EL Sbjct: 529 ----YKSLLLDMEANDIRCRIR-QGLSLGESVQLQKRLRELQ 565 >UniRef50_Q83GI9 DNA primase n=2 Tax=Tropheryma whipplei RepID=Q83GI9_TROWT Length = 603 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 162/612 (26%), Positives = 269/612 (43%), Gaps = 47/612 (7%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKK-QGKNFHACCPFHNEKTPSFTVNGEKQFY 59 M+ I + I+++ R +I ++I LK+ + CPFH+E+TPSF V E Y Sbjct: 1 MSK-IKQEVIHEIKERANIREIIGEYTNLKRQSAGAYAGLCPFHSERTPSFHVR-ETGLY 58 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 HCFGCG G+ I F+ + L FV+ VE+LA + + + G R L Sbjct: 59 HCFGCGKGGDVISFVQEIEGLNFVDAVEQLARTLGITIVYYEGDSTP----DSRSNLLAA 114 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 FY + L +T A +L+ RG ++ R+ IGF+P ++ K Sbjct: 115 CKSAAEFYSEQLLS--STPAVTFLKSRGFDRDLCERYQIGFSPTNSGDLYKHLRDKGFTL 172 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGND--TPKYLNSPETD 237 Q + AG+L DRFR R+++P++D G ++GFG R L D PKY+NSPE+ Sbjct: 173 QQAVAAGLL----NPSGMDRFRARIVWPVKDVTGNIVGFGARKLAEDAQGPKYINSPESS 228 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 ++ K LYG A++ ++ +R+++VEGY DV++ Q GI+ AVA+ GTS H++L+ Sbjct: 229 LYKKNSLLYGFDVAKKAISKKDRVVIVEGYTDVMSCHQSGIDEAVATCGTSWGIGHMRLI 288 Query: 298 FRATNN---VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEG 354 R ++ +I +DGD+AG+ A RA + + P G DP L K G Sbjct: 289 KRMLSDSGVLIFAFDGDQAGQHAIMRAFKDSPEIAARS---YAAIFPKGLDPCELRIKNG 345 Query: 355 KEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQE 414 +A +E+A+PL F+ N + + L T R LP + ++ LR + Sbjct: 346 AQAVIDLVERAIPLYEFVINHQLSKCPLGTFPERRAALAKILPFLKEISDRILRDHYTGL 405 Query: 415 LGNKLGILDDSQLERLMP-------------------KAAESGVSRPVPQLKRTTMRILI 455 + ++LGI + L K E P + + +I Sbjct: 406 VCSRLGIDREQVDLLLPKLEHISSRFHPSKIPWQEDWKKKEFAAPTNPPDARFALEQQVI 465 Query: 456 GLLVQNPELATLVPPLENLDE-NKLPGLGLFRELVNTCLSQPGLT-----TGQLLEHYRG 509 L+Q L + D P L +++ + + + +L+ Sbjct: 466 KSLLQYQHLLERDTAIAMCDYSFHNPTLSFIAQMIGMVIREQNRSISPAEFSKLIHSTVP 525 Query: 510 TNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERL 569 + ATL+ L + + + + + L + L+ R+ + S E+ L Sbjct: 526 SEYHATLQALEVLPVPVSPDKLDSYLEGLVRSFENQHLLEE-KALLLRQLSSEKSLEKSL 584 Query: 570 ELWTLNQELAKK 581 EL EL K+ Sbjct: 585 ELRQRIVELEKQ 596 >UniRef50_O83505 DNA primase n=3 Tax=Treponema RepID=PRIM_TREPA Length = 605 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 148/600 (24%), Positives = 251/600 (41%), Gaps = 28/600 (4%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA RI I+ + R D+V L+ L+++G ++ CPFH+E+TPSF V +K+ Y+ Sbjct: 1 MA-RISAHVIDAIADRVDLVSLVGNYTHLERRGDDWWGRCPFHHERTPSFHVVPDKKMYY 59 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCG G+ I F M +K++F E LA +E+ FE G L ++ Sbjct: 60 CFGCGVGGSTIKFFMEIEKIDFHEAAVRLAKRAGIEMSFEDGVHAPSAHASFTMQLCEVY 119 Query: 121 DGLNTFYQQSL-QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + + L AR YL R ++ + I F +G+APP + + + Sbjct: 120 QRIAETFHHVLMHTAQGARARAYLASRKVTDDSIRTFKLGYAPPDPVWLFQFLRHKGYSP 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 + L +G+ + F +R+M+PI D+ G+VI FG R LG KYLN+ + + Sbjct: 180 EFLARSGLFAKKSE--RIAVFSDRIMYPIADRYGQVIAFGARALGTAPAKYLNTADMPQY 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 KG L+ + A + ++ EGYMDV+A Q + YAVA LG T +L+ Sbjct: 238 KKGEHLFAFHCALSQMRKTRAAIICEGYMDVIAFHQAQLTYAVAPLGALLTKSQARLMRS 297 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + + C+D D AGR A ++A+ G ++R + L G DP EG++A Sbjct: 298 FVDRIYMCFDADGAGRAATYKAILLCRSL---GFEVRIVELNGGTDPAECACIEGEDALR 354 Query: 360 ARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 +E++ + +L + D +R + P +S + R + Q++ Sbjct: 355 KSVERSTTDAQYLIRCARHEHSHLGADDTSRAVSFLFPYLSVLDSAIQREQVMQDIAMAF 414 Query: 420 GILDDSQLERLMPKAAESGVS-----------------RPVPQLKRTTMRILIGLLVQNP 462 GI + + + + + RT L+ +V NP Sbjct: 415 GIRIQAVHADYLRYVSRTTQKGTTGNCVLSVQGTAIQVKEPATGVRTAQLRLVLAVVANP 474 Query: 463 ELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMW 522 EL L+ D+ + P ++ C + +L + + + Sbjct: 475 ELFELLRESVCADDFEDPMAKELFIILEECYRADTRASPHVLSCCTTDELRKLVSEAIVC 534 Query: 523 DDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGL--SNEERLELWTLNQELAK 580 + + A Q D + + + L +E L+ R R G S EE + L E + Sbjct: 535 GEFSC--NAPQIVRDGVALVRRNRLLKERESLVGRLRRFGDASSGEECGSMQELMMEKQR 592 >UniRef50_B6INY0 DNA primase, catalytic core, putative n=1 Tax=Rhodospirillum centenum SW RepID=B6INY0_RHOCS Length = 620 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 195/613 (31%), Positives = 287/613 (46%), Gaps = 37/613 (6%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 MA +P F+ +L AR + D++ R++L + G + A CPFH EKTPSF VN K F+H Sbjct: 1 MA--LPPNFLEELRARLSLSDVVMKRMRLIRAGHEYKAPCPFHKEKTPSFYVNDAKGFFH 58 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CFGCGAHG+AI F+M +D L F+E VE LA L VP S + ++++L+ L+ Sbjct: 59 CFGCGAHGDAIAFVMRHDNLSFMEAVELLAGEAGLSVP--KASPEAVARFERQKSLFDLV 116 Query: 121 DGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQ 180 + ++Q L P A +YL RGL + IARF +G+AP + Sbjct: 117 ERATRHFEQQLGLPAGRQALEYLRGRGLDDDTIARFRLGYAPHDGAGLRAELEQAGYGEA 176 Query: 181 SLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 +I+AG+ + GR F RV+FP+ D+RGRV+ FG R+L D PKY+NS +T +F Sbjct: 177 DMIEAGLFKRPEPGRGLRAFFWNRVIFPVTDRRGRVVAFGARLLSGDGPKYINSGDTPLF 236 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 HKG LY L A+Q E ++V EGYMDV++ G + AVA LGT+ T I L++ Sbjct: 237 HKGNILYNLSRARQAAVEGRPVVVTEGYMDVISCVTAGFDGAVAPLGTALTEAQILELWK 296 Query: 300 ATNN----VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGK 355 I C+DGD AGR AA RA+E LP + R FLP+ EDPD+L+R G Sbjct: 297 LAPEGRRTPILCFDGDSAGRRAAARAVERLLPLLLPDHSARVAFLPEKEDPDSLIRAGGA 356 Query: 356 EAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQEL 415 AF+A +++A PL+ L++ DL+ PD RA L + + +R Q++ Sbjct: 357 AAFQAVLDRARPLADVLWDLEAQGRDLAQPDARAGLEAALAARCAAIQDARVRRAYEQDM 416 Query: 416 GNKLGILDDSQLERLMPKAAESGVSR-------PVPQLK-------------RTTMRILI 455 ++L +A PV L R R+L+ Sbjct: 417 RDRLFAAARQGRGGRGGRAGTGRRGMRPLVDGLPVSPLYDARFRTGLIRTEPRQMERLLL 476 Query: 456 GLLVQNPELATLVPPLENLDENKLPGLGLFR-ELVNTCLSQPGLTTGQLLEHYRGTNNAA 514 ++ +PEL P L R +V + L +L H + Sbjct: 477 LPVLHHPELFEEFGEQLAEAVFATPALETLRCAMVEVLTANSALDAAELHSHLSSRGLSE 536 Query: 515 TLEKLSMWDDI------ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEER 568 TL+ L D A + A + + + L+ + R S E Sbjct: 537 TLDGLLSADAPRFAHPGASIDAARTGWQGVWLNSQEVALQAELRDAERRLAEQ-FSQENL 595 Query: 569 LELWTLNQELAKK 581 + L QE ++ Sbjct: 596 ARVQALRQEALRR 608 >UniRef50_B0S1K2 DNA primase n=1 Tax=Finegoldia magna ATCC 29328 RepID=B0S1K2_FINM2 Length = 595 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 143/593 (24%), Positives = 293/593 (49%), Gaps = 27/593 (4%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRSGSNYIGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA + V + ++ + R+ L+ + + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLADKLGILV---ETNEVNKEKYEHRKKLFAINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F+ ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFFYKNLL--INDVPKEYIKKRDLTNSMINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G+ +++G +D+FR R+MFPI D RG +IGFGGR L + KY+NSP++ + K Sbjct: 176 IEVGLANQDERGNIFDKFRNRLMFPIIDIRGNIIGFGGRTLADAKAKYMNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ + + ++++VEGYMDV++L YG ++A+ASLGTS T D +L+ R Sbjct: 236 KNVYGVSNLKNS-TKVGKIILVEGYMDVISLTNYGFDFAIASLGTSLTYDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA++ + + +PD DPD ++K G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIQV---FKEIDISPNIIVIPDNLDPDDYIKKYGNESFNKLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AM + + ++ + D++ + +L L+S++ +R ++ L I Sbjct: 352 DNAMDSIIYEYKKILKKYDINDVKEKIQLIDDLTTLLSKLDRAVIRDEYIKKFAEDLQID 411 Query: 423 DDSQLERLMPKAAESGVSRPVPQL-------------KRTTMRILIGLLVQNPELATLVP 469 D+S + K + + + V + ++ T ++ + ++ + Sbjct: 412 DNSLRTDVSDKLSVAKPNISVNREVTAYSDVLDINLQEKITAIEIMTIACFYRDIYETIK 471 Query: 470 PLENLDENKLPGLGLFRELVNTCL---SQPGLTTGQLLEHYRGT-NNAATLEKLSMWDDI 525 + + + F E + ++ + + ++++ T++ L Sbjct: 472 EDVSKFKTDIIYYNNFMEFADNYYLKNNEKEINENSVRDYFKNDIQMDRTIDYLFNTSRN 531 Query: 526 ADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQEL 578 + + + + + + ++ + ++ +++ + + ++ Sbjct: 532 SININSIDRVILEIKKYLITQEKDKIKQQLDLMQSVDFNDKINQKYKEILNKI 584 >UniRef50_A9B4A9 DNA primase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B4A9_HERA2 Length = 645 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 170/625 (27%), Positives = 274/625 (43%), Gaps = 58/625 (9%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFH-NEKTPSFTVNGEKQFYHCFGCG 65 I+D+ R DIV I V L+K G+N+ CPFH N +TP+FTV + YHCFGC Sbjct: 2 NSVIDDIKERIDIVSFISDYVPLRKAGRNWVGFCPFHSNTRTPAFTVFADSNSYHCFGCK 61 Query: 66 AHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLNT 125 A G DFLM + ++F E + +LAA +++ + E R + +L Sbjct: 62 ASGTIFDFLMQREGIDFPEALNQLAARAGVQL--RQRTAQDDQEDVLRSRMLELNAAAAR 119 Query: 126 FY-QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFG-GNPENRQSLI 183 F+ Q LQ P A R Y+E+RGL+ + + +F +G+A W ++L + N + Sbjct: 120 FWSHQLLQSPKAAHVRSYIEQRGLTPQTVEQFQLGYASEDWSSLLGYLHDRHGANPSEVA 179 Query: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGR 243 + G+ + +QG YDRFR R+MFPI + +G+++GFGGR+LG+ PKY+NSP+T +F K Sbjct: 180 EVGLALEREQGGYYDRFRGRLMFPIHNAKGQIVGFGGRILGDGHPKYINSPQTLLFDKSS 239 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL++A++ + ++VVEGY+DV+ Q G +A +GT+ T H L + T Sbjct: 240 LLYGLFQARETIRSTDSVVVVEGYVDVIMAHQAGFRNVLAPMGTALTDVHAGQLNKMTKR 299 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGR------------------QLRFMFLPDGED 345 + DGD AG+ AA R LET + ++ LPDG D Sbjct: 300 ITLAMDGDAAGQSAALRGLETLRETLDTHVRPVPTASGMLRWERELDATIKIALLPDGRD 359 Query: 346 PDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGE 405 PD +VR E + + + A PL F +L +DL++ G++ PL++Q+ Sbjct: 360 PDDIVRNN-PEEWRSLIANAQPLMDFYLATLTRGLDLNSAKGKSTAVERLTPLLNQIADP 418 Query: 406 TLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT--------------M 451 + + Q L N++ I + E Q + Sbjct: 419 VEKAHYIQRLANQIKIDQRLIEGSIGGDQPERQRKPNHRQSRPAAPPPVFSILEQEARRE 478 Query: 452 RILIGLLVQNPELATLVPPLENLDENKLP-----------------GLGLFRELVNTCLS 494 L+ LL++ P++ +V D P + +L + + Sbjct: 479 DFLLSLLIRFPQVQAVVSEQLRDDLAAAPTLRELWSGDVSELFERVENRVLWDLWRSAQA 538 Query: 495 QPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNI--AEQTFTDSLNHMFDSLLELRQE 552 + LE A E+L WD + + L + L + + Sbjct: 539 MATPNPIEWLETV-PAELQAHGERLLNWDHAPPTRSFRVTREAEECLRPLRHRLGKRWSD 597 Query: 553 ELIARERTHGLSNEERLELWTLNQE 577 L +ERL + + Sbjct: 598 RLGQIIAAAEPDQQERLLEQAMAIQ 622 >UniRef50_D1XXM0 DNA primase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XXM0_9BACT Length = 669 Score = 461 bits (1186), Expect = e-128, Method: Composition-based stats. Identities = 135/457 (29%), Positives = 233/457 (50%), Gaps = 12/457 (2%) Query: 4 RIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFG 63 I + ++ ++ T+IVD++ + L+K G N+ CPFH++ TPSF+V+ K Y CF Sbjct: 1 MIDKQTVDKIIDATNIVDVVSDFISLRKAGTNYKGLCPFHDDSTPSFSVSPIKGVYKCFS 60 Query: 64 CGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGL 123 CGA GNA+ F+M Y+++ + E ++ L +N+EV + +++ +R+++ + + Sbjct: 61 CGAAGNAVKFVMQYEQMTYWEALKWLGKKYNIEVKEREMTSEEKLQASERESMLIVNEWA 120 Query: 124 NTFYQQSLQQPVATSA--RQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQS 181 + ++Q L A QY RG ++I +F +GF D+ K ++ Sbjct: 121 SNYFQNILATNPDGRAIGLQYFRSRGFRDDIIKKFQLGFCLSPRDSFAKAALEAGYKKEF 180 Query: 182 LIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTP----KYLNSPETD 237 L+ G+ G DRF RVMFP G+V FGGR+L + T KY+NSP+++ Sbjct: 181 LLKTGLCFERQTGELVDRFNGRVMFPWISVSGKVTAFGGRLLDSRTKGVMQKYVNSPDSE 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 I+HK R+LYG+++A++ A+ + + +VEGY DV+++ Q GI VA+ GT+ + I+LL Sbjct: 241 IYHKERELYGIFQAKKAIAKYDLVYMVEGYTDVISMHQCGIENVVANSGTALSVYQIRLL 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 R T+N++ YDGD AG+ AA R + L ++G ++ + LPDG+DPD + E Sbjct: 301 HRFTSNIVLLYDGDAAGQHAALRGTDMLL---SEGMNVKVLLLPDGKDPDEFAKMYSAED 357 Query: 358 FEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELG 416 +E F N L+ V + P R+ + IS + LR E Sbjct: 358 LVKYIEDNQTDFIVFKINLLLKGV--TDPIKRSEAINSIVESISVIKDPILRDTYLHECM 415 Query: 417 NKLGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRI 453 + G+ + + + ++ + T Sbjct: 416 ARTGMAEQTLIAQMNRFIYNGREREKREAENQRTREN 452 >UniRef50_A4WQT0 DNA primase n=22 Tax=Rhodobacterales RepID=A4WQT0_RHOS5 Length = 654 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 180/561 (32%), Positives = 271/561 (48%), Gaps = 30/561 (5%) Query: 5 IPRVFINDLLARTDIVDLIDARV--KLKKQG---KNFHACCPFHNEKTPSFTVNGEKQFY 59 +P F+++L R + ++ +V L+K +F A CPFH EK+ SF V+ K FY Sbjct: 3 LPPGFLDELRNRVPLSQVVGRKVTWDLRKSNQGRGDFWAPCPFHQEKSASFHVDDRKGFY 62 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+AI F+ + + F+E VE LA + +P + + +R L + Sbjct: 63 YCFGCHAKGDAIGFVKETENVGFMEAVEILAREAGMTMPAR--DPRAAEKADRRSQLAEA 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 M+ FY+ L+ A++AR YL +R LS+E RF IGFAP G + + G Sbjct: 121 MEEAVKFYRLQLRTGAASAARDYLVRRRLSNEGQERFGIGFAPDGRQALFQALTGKGIAA 180 Query: 180 QSLIDAGMLVTNDQGR-SYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNSPETD 237 L++AG+ + G YDRFR R++FPIRD RGR I GGR + KYLN PET Sbjct: 181 DLLVEAGLCARPEDGGAPYDRFRNRIIFPIRDARGRAISLGGRAMDPAARAKYLNGPETP 240 Query: 238 IFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLL 297 +F KGR LY + A++ + L+V EGYMDV+AL++ G VA LGT+ T D ++L+ Sbjct: 241 LFDKGRNLYNIGPAREAAGKGQPLVVAEGYMDVIALSEAGFGATVAPLGTAVTEDQLRLM 300 Query: 298 FRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEA 357 +R + + DGD AG AA R ++ ALP + G+ LRF LP G DPD L+R EG A Sbjct: 301 WRIHSEPVIALDGDAAGLRAALRVVDLALPLLEAGQGLRFAVLPPGLDPDDLIRSEGAAA 360 Query: 358 FEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGN 417 +E A P+ + L+ +P+ RA L + ++ T+R + EL Sbjct: 361 MARVIEGAQPMVSLLWRRETEGQIFDSPERRAALDKRLRAAVQRIADPTIRRHYGDELNR 420 Query: 418 -KLGILDDSQLERLMPK--AAESGVSRPVPQLKRT--------------TMRILIGLLVQ 460 ++ + + R + E+G V + + +L+ LV Sbjct: 421 LRMDLFGSATPRRAFHRGGRREAGAGMQVSVARNSLLARAASEAAEEQLQEAVLLAALVT 480 Query: 461 NPELATLVPP-LENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKL 519 +P L +E +D ++R L+ L PG+ G L LEKL Sbjct: 481 HPGLVARFEAGIEAVDFLGEGHRQVWRALMRHAL--PGMEVGDLRARI-AAEAGEGLEKL 537 Query: 520 SMWDDIADKNIAEQTFTDSLN 540 + A + D L Sbjct: 538 LSESHLRIAPGAREGDEDDLA 558 >UniRef50_C2HGK8 DNA primase n=1 Tax=Finegoldia magna ATCC 53516 RepID=C2HGK8_PEPMA Length = 598 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 162/589 (27%), Positives = 301/589 (51%), Gaps = 21/589 (3%) Query: 3 GRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCF 62 G IP+ I+++ + DIV +I V+LK+ G N+ CPFHNEKTPSF+V+ K +HCF Sbjct: 2 GFIPQDKIDEIKSVADIVSVIGDYVELKRAGSNYVGLCPFHNEKTPSFSVSPSKGIFHCF 61 Query: 63 GCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDG 122 GCG G+ I F+M + L + E ++ LA + V + ++ + R+ L+++ + Sbjct: 62 GCGVGGDVISFIMQKEGLSYPEAIKFLADKLGILV---ETNEVNKEKYEHRKKLFEINNE 118 Query: 123 LNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 FY ++L + ++Y++KR L++ +I +F IG+A G +++ + + + Sbjct: 119 AKLFYYKNLL--INDIPKEYIKKRNLNNNLINKFIIGYA-DGKNSLYRHLLQKGYQKDDI 175 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 I+ G++ +++G YD+FR R+MFPI D RG VIGFGGR L KYLNSP++ + K Sbjct: 176 IEVGLINQDEKGNVYDKFRNRLMFPIIDIRGNVIGFGGRALAEARAKYLNSPQSLAYDKS 235 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 + +YG+ + + ++++VEGYMDV++L YG +YA+ASLGTS T D +L+ R Sbjct: 236 KNVYGVSNLKNS-TKVGKIILVEGYMDVISLTNYGFDYAIASLGTSLTHDQAKLIKRYCK 294 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ CYDGD AG++A RA+E + + +PD DPD +++ G E+F + Sbjct: 295 NIYICYDGDSAGQNATSRAIEI---FKEQDISPNIIVIPDNMDPDDYIKQYGNESFNRLI 351 Query: 363 EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 422 + AM + + ++ + D++ + +L L+S++ E +R ++ + L I Sbjct: 352 DNAMDSVIYEYKKILQKYDINDVKEKIQLIDDLTTLLSKLDREVIRDEYIKKFSDDLNIE 411 Query: 423 DDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENKLPGL 482 S + + K E+ + + + + N E T + + +K Sbjct: 412 YVSLKKDVYNKLKETKPNVNFHNERTEDNQNTEKDSINNQEKITAIDIMTIACFHKDIYY 471 Query: 483 GLFRELVNT-CLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS--- 538 L E + ++ Y NN +++ + D + ++T Sbjct: 472 DLKEEFSKFKTKISSYNNFMEFVDFYYSKNNENQIDEKAARDYFKNDIQMDRTIDYLYQK 531 Query: 539 ------LNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAKK 581 +N++ +LE++ + L+ +E+ + S + ++ N+++ K+ Sbjct: 532 SRYSININNIGRVVLEIK-KYLMTQEKDNIKSQLDLMQSVEFNEKINKE 579 >UniRef50_A5EXR5 DNA primase n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXR5_DICNV Length = 551 Score = 460 bits (1185), Expect = e-128, Method: Composition-based stats. Identities = 181/554 (32%), Positives = 279/554 (50%), Gaps = 11/554 (1%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKL-KKQGKNFHACCPFHNEKTPSFTVNGEKQFY 59 M RIP+ FI+DL+ RT+IV LI +R+ KK G N+ ACCPFH EKTPSFTV+ KQFY Sbjct: 1 MGKRIPKSFIDDLINRTNIVSLIGSRLSYAKKMGANYVACCPFHQEKTPSFTVSEVKQFY 60 Query: 60 HCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQL 119 +CFGC A G+A+ FLM+Y+ L FVE VE LA H L +P+E + E+ + + Sbjct: 61 YCFGCQAGGDALRFLMDYEHLSFVEAVESLAHFHGLTIPYEETESYNPEEKSRIELGLLC 120 Query: 120 MDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + F+Q+ A SAR+YL RG+ ++ F +G+AP G + F + Sbjct: 121 LADAAQFFQRCFYTEEAVSAREYLRARGIKKHLVDDFLLGYAPAGNQLL--AFLRDKYEL 178 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIF 239 L G++ D GR YD FR+R+MFPIR+ RG++I FG R + N+ PKYLNS E+ F Sbjct: 179 PLLQAVGLIGEKD-GRYYDWFRQRLMFPIRNIRGQIIAFGARTIANEQPKYLNSAESPWF 237 Query: 240 HKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFR 299 +K +LYG A + + L+V EGY+DV+ +AQ+G++ AVA+LGT+ H+Q L + Sbjct: 238 NKRNELYGFDTAARS--KQTSLIVTEGYVDVIKMAQFGLDNAVATLGTAFGDTHLQQLKK 295 Query: 300 ATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFE 359 + V C+DGD AG+ AA +AL + +G RF+FLP GEDPD+ + + G AF Sbjct: 296 RSKKVYFCFDGDAAGKHAAEKALHIIFTHYEEGYDWRFVFLPAGEDPDSFLTQHGSAAFL 355 Query: 360 ARMEQAMPLSAFLFNSL-MPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNK 418 ++ + P S FL L + Q T + A + A + +P R ++++L + Sbjct: 356 QLLDASEPPSLFLQRLLNIDQRATWTAEEYAAVVEKAAQWLGLLPQGHYRQMMQKQLQKQ 415 Query: 419 LGILDDSQLERLMPKAAESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPPLENLDENK 478 L + ++ + + +L+Q P + + Sbjct: 416 LNTSV-AIIDSSEKSIEYHAAGGSLAAAPTKLEARMAAVLLQQPSWYLKI-DMNQYASLL 473 Query: 479 LPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTDS 538 + F L+ G L R + L + + D+ + F Sbjct: 474 AKEVPFFYRLLYLLRC--GADKAVLEAEIRAMHLEVDLMRSRQLFSLLDEKLLTVEFEGM 531 Query: 539 LNHMFDSLLELRQE 552 + + L+ + Sbjct: 532 MQELLRQHLKKQAR 545 >UniRef50_C2G0R6 DNA primase n=2 Tax=Sphingobacterium spiritivorum RepID=C2G0R6_9SPHI Length = 683 Score = 460 bits (1183), Expect = e-128, Method: Composition-based stats. Identities = 167/646 (25%), Positives = 283/646 (43%), Gaps = 74/646 (11%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I + I+ +L I +++ V LKK+G + CPFHNEKTPSF V+ K Y CFGC Sbjct: 24 IKKETIDKVLDTARIEEVVGDFVDLKKRGTSLIGNCPFHNEKTPSFHVSVAKGIYKCFGC 83 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GA G+A+ F+M+ +K + E + LA ++++V + S + +R++LY L Sbjct: 84 GAGGDALKFVMDLEKYSYPEAIRYLANKYHIDVEEQERSPAQMAAQDKRESLYVLSQWAG 143 Query: 125 TFYQQSLQQPVATS--ARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSL 182 F++ ++ Q Y ++RG ++I +F +G++P W +++ + L Sbjct: 144 KFFKDNMWQTDMGQSIGLAYFKERGYREDIIKKFELGYSPDQWTALVEAAKTAGFQEEYL 203 Query: 183 IDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL--GNDTPKYLNSPETDIFH 240 + G+ + D G YDRFR RVMFPI++ GRVIGFGGR L PKY+NSPE++I+H Sbjct: 204 KEIGLTIQRDDGSMYDRFRGRVMFPIQNLTGRVIGFGGRTLKTEKSVPKYVNSPESEIYH 263 Query: 241 KGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRA 300 K LYGL A++ + + +VEGY DV+++ Q G+ V+S GTS T+ I+L+ R Sbjct: 264 KSDVLYGLNFAKKAIVDADNCYLVEGYADVLSVHQAGVENVVSSSGTSLTSGQIRLISRF 323 Query: 301 TNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEA 360 T NV YDGD AG A+ R + L +G ++ + PDG DPD+ V+K G +AF+ Sbjct: 324 TKNVTILYDGDTAGIKASLRGTDMLLE---EGLNVKILLFPDGNDPDSYVQKFGSDAFKK 380 Query: 361 RM-EQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKL 419 + + F N L+ + + P RA + + I+ +P E ++ N L Sbjct: 381 YIADHQEDFIFFKTNILLKDAE-NDPIKRADVIRDVVESIALIPDEIKVAVFIRQCSNLL 439 Query: 420 GILDDSQLERLMPKA--------------------------------------AESGVSR 441 I + L L E G Sbjct: 440 DIEERVLLSELNNIRVKKAKDADKKNQRNLSASSSPFSPSEGDGPPADFFMTDEERGGPA 499 Query: 442 PVPQLKRTT----MRILIGLLVQNPELAT-------------LVPPLENLDENKLPGLGL 484 P P+ K T R +I +L+ + L+ +++++ P + Sbjct: 500 PEPEHKITPEILQEREIIRILLNYGDYLATWEGDGDIPIAPLLLGSIDDVEFEDKPSAYI 559 Query: 485 FRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADK----------NIAEQT 534 Q H + + ++ +++ + Sbjct: 560 LSVYKEYAERFEIPQAKQFFSHEDRLVSDLAITCVASPYNLSPNWNDDKRKIYVTQEYEL 619 Query: 535 FTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + + + + E + R R + +++ L L + K Sbjct: 620 LKNLVIQAIYRIKKRKVESEMLRIREELRTEQDQANLEILLSKYQK 665 >UniRef50_C7MNL3 DNA primase, catalytic core n=4 Tax=Coriobacteriaceae RepID=C7MNL3_CRYCD Length = 642 Score = 459 bits (1182), Expect = e-127, Method: Composition-based stats. Identities = 184/636 (28%), Positives = 281/636 (44%), Gaps = 70/636 (11%) Query: 1 MAGR--IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQF 58 MA I I + A TD+V L RV L+++G++F CCPFH+EK+PS ++ Q Sbjct: 1 MARVAGISDEDIQKVRAATDLVSLFSERVPLRQRGRDFWCCCPFHDEKSPSCKIDPATQQ 60 Query: 59 YHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQ 118 ++CFGC HG+ F+M + ++F + V LA ++E+ G G +R L Sbjct: 61 FYCFGCHEHGDVFSFVMKTEDIDFPDAVRRLADRAHIELHESGGRGGVSRSYKER--LRG 118 Query: 119 LMDGLNTFYQQSL---QQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 175 + FY Q L + P A +AR YL RGL +V A + +GFAP G +++ Sbjct: 119 VCQETRDFYHQQLMRLKSPEADAARSYLASRGLGGQVPAHWHLGFAP-GHGVLMRHLRSR 177 Query: 176 PENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPE 235 + ++DA ++V+ D DRF R+MFPI D++G I FGGRV+G+ PKYLNS + Sbjct: 178 GYTVKEMVDANVVVSRDNATPRDRFFNRIMFPIHDEQGECIAFGGRVVGSGEPKYLNSQD 237 Query: 236 TDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQ 295 T +FHK L+GL A+ + +VVEGY DV+AL++ G+ VA+LGT+ T HI+ Sbjct: 238 TPLFHKSNILFGLDAAKAAMTASGQAIVVEGYTDVIALSEAGVKNVVATLGTALTTQHIR 297 Query: 296 LLFRAT-NNVICCYDGDRAGRDAAWRAL-----ETALPYMTDGRQLRFMFLPDGEDPDTL 349 L R VI +DGD AG+ A RAL L LPDG DP Sbjct: 298 SLSRHAGQRVIYLFDGDEAGQRATDRALGFIDESMTPEAGKVRIDLLACTLPDGLDPADF 357 Query: 350 VRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRI 409 V K G + A ++QA PL AF + + Q DLSTP+GR AL L++ + L Sbjct: 358 VDKYGADELRAELKQAKPLIAFGIDRHLAQFDLSTPEGRTAAFADALALLAPIKDSLLAQ 417 Query: 410 YLRQELGNKLGILDDSQLERLMPKAAESGVS----------------------------- 440 ++ +L +D LERL Sbjct: 418 DYAVQIAGRLHFREDDALERLSRLQPPRRAQVASSSSSSRNADHQDRQVALSSQPQTTSS 477 Query: 441 ------RPVPQLKRTTMRILIGLLVQNPEL-ATLVPPLENLDENKLPGLGLFRELVNTCL 493 + +R LI + +P L T L + ++ L++ Sbjct: 478 VKPAALPQSERTRRRFEAALIRVCAHHPHLTLTHADALAQTNWHEALHAQAADALLDCVA 537 Query: 494 SQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIAD---------KNIAEQTFTDSLNHMFD 544 P + + AT+ +S D +D + ++ +D+++ Sbjct: 538 KNPTASPAEAAAAITQRAPDATVLLVSRSPDPSDIAAFAAYLVEELSLGDLSDTIDAYRS 597 Query: 545 SLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 L R GL ++ER L+ + + Sbjct: 598 QL-----------ARPDGLDSQERELLFQTVAGMQR 622 >UniRef50_C8NEW8 DNA primase n=2 Tax=Granulicatella RepID=C8NEW8_9LACT Length = 621 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 147/609 (24%), Positives = 269/609 (44%), Gaps = 32/609 (5%) Query: 1 MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYH 60 M+ RI + + + ++ +I+D++ V+L+KQGK+ CPFH+E+TPSFTV EKQ +H Sbjct: 1 MSQRISKETVQSIQSQVNILDIVGQFVQLRKQGKSLFGRCPFHDERTPSFTVTEEKQLFH 60 Query: 61 CFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLM 120 CF CG GN +F+ + L F E+V +A + N+++ E + + I R ++ LY+ Sbjct: 61 CFSCGRGGNVFNFMQELENLSFPESVVRVAELSNIDIDVELPTTQTIIPRKEK-KLYEAH 119 Query: 121 DGLNTFY-QQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENR 179 + FY L A YLE RG + E + F GF+ + + Sbjct: 120 EKAAEFYSHVLLNTKGGKEALDYLENRGYTVETLKEFGFGFSLKDRTQLEQVLQELQLTD 179 Query: 180 QSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN------DTPKYLNS 233 + +G+ G +DRF +R+M P+R++ G++I F GRVL KYLNS Sbjct: 180 EEKEASGLFSEKQNG-FFDRFNQRIMIPLRNEHGQIIAFSGRVLPGYSDDFASQAKYLNS 238 Query: 234 PETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADH 293 PET +F K L+ A+++ + N++++ EGYMDV++ Q G+ VAS+GTS T D Sbjct: 239 PETILFSKRNFLFNFDLAKKNIRKQNKVILFEGYMDVISAWQAGVQIGVASMGTSLTPDQ 298 Query: 294 IQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKE 353 IQ L + T+ ++ YDGD+AG +A RA+E T+ ++ + +G DPD +++ Sbjct: 299 IQTLQKVTDTILIAYDGDKAGLEATNRAIEMIQD--TNTFKIGIIPFDNGLDPDEFIKER 356 Query: 354 GKEAFEARME-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLR 412 G +AF+ +E + F L + L + + + +S++ E Sbjct: 357 GTQAFKDLVEYSQETVYQFKKRFLSKKYSLQIESQKIQYIEEMIVELSKINNEVELNLAM 416 Query: 413 QELGNKLGILDDSQLERLMPKAAESGVSRPVPQLK----------------RTTMRILIG 456 + L ++ + + L ++ G + + + L+ Sbjct: 417 KSLADEFDLDFSTVLNQVKQLRLRLGKQKRQSNAESVSYNRQVEIKPATKNEHIQKQLMY 476 Query: 457 LLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQP-GLTTGQLLEHYRGTNNAAT 515 L+ N + T + +++ L+ + ++ + Q + Sbjct: 477 RLLHNEQAWTYLNRIDSEFVFPDSHYEQLYLLLQSFKNEENEVDVQQFFLFLDDKDVLNR 536 Query: 516 LEKLSMWDDIADKNIAEQTFTDSLNHM-FDSLLELRQEELIARERTHGLSNEE--RLELW 572 + EQ D + + + L+ + L ++ R +L Sbjct: 537 NLVSEIELSNFPPECTEQEIQDLVYVLSKKNSLKEQLASKKEELNRAALMKDDILRQQLM 596 Query: 573 TLNQELAKK 581 E+ ++ Sbjct: 597 REIMEIQRQ 605 >UniRef50_A4XHW3 DNA primase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHW3_CALS8 Length = 616 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 171/594 (28%), Positives = 275/594 (46%), Gaps = 37/594 (6%) Query: 7 RVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGCGA 66 + +L + DIVD++ + + LK+ G NF A CPFH+EKTPSF V+ KQ +HCFGCG Sbjct: 30 ERIVEQVLNKVDIVDIVSSYIPLKRVGVNFRALCPFHSEKTPSFYVSPAKQIFHCFGCGV 89 Query: 67 HGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG-SGPSQIERHQRQTLYQLMDGLNT 125 GN I F+M + L F E ++ LA +++ F S + Q++ L L Sbjct: 90 GGNVIHFVMRMENLTFTEALKVLAEKAKIDIDFSQSQSAKDRALAKQKEELINLHKDCFE 149 Query: 126 FYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDA 185 ++++ L A +Y+ KR ++ + RF +GF P D + R +++ + + Sbjct: 150 YFREQLYLRKNIEAVKYIIKRRIAKDTAKRFGLGFCPEKND-LYDRLSQK-YSKEIIDLS 207 Query: 186 GMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGN--DTPKYLNSPETDIFHKGR 243 G+ + G++Y RF R++FPI D RVI FGGR++ + PKY+NSP+T IF K R Sbjct: 208 GIFLER-NGKNYCRFEGRLIFPIFDTMNRVIAFGGRIISDASAAPKYMNSPDTLIFSKSR 266 Query: 244 QLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNN 303 LYGL A+Q + N +VVEGYMDV+AL Q GI+ AV LGT+ T DH LL R N Sbjct: 267 ILYGLNIAKQS--KENEFVVVEGYMDVIALHQEGIDNAVGVLGTALTQDHSFLLRRYKNE 324 Query: 304 VICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARME 363 V+ C D D AG+ AA R+ + +G +R M L +DPD +++ GK+AF + + Sbjct: 325 VVLCLDSDEAGKKAAIRSADIL---YQNGLMVRVMELEGAKDPDEYIKRFGKDAFLLKKQ 381 Query: 364 QAMPLSAFLFNSLMPQVDLSTPDGRARLSTL-ALPLISQVPGETLRIYLRQELGNKLGIL 422 +M + + L Q DL+ D + R ++ + E R ++L + G+ Sbjct: 382 NSMFVIDYKVKELKNQYDLTKSDQKFRFVREYFEKILIPISNEVERQEYIKKLSDLTGVN 441 Query: 423 DDSQLERLMPKAA------------ESGVSRPVPQLKRTTMRILIGLLVQNPELATLVPP 470 ++ + + +PV + LL E A Sbjct: 442 ENVISKEFSKTTQKELKRIENINYFKQIQQKPVLSDFEMLKKNENYLLSLYTEWAPKSEE 501 Query: 471 LENL----DENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIA 526 ++NL D +F + N L+ LL + L S Sbjct: 502 IKNLLTEEDFYTEDVKNIFTAVKNLINEGMELSYSMLLSFVTDESILFDLTSFSSKGFE- 560 Query: 527 DKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQELAK 580 + + A++ + + L+L + + + L++ + EL K Sbjct: 561 NADTAKKAIEELKVKIKTLGLKLELKAAQQQ--------NDNLKITQILDELKK 606 >UniRef50_B9E6V3 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E6V3_MACCJ Length = 583 Score = 459 bits (1180), Expect = e-127, Method: Composition-based stats. Identities = 143/587 (24%), Positives = 263/587 (44%), Gaps = 19/587 (3%) Query: 5 IPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHNEKTPSFTVNGEKQFYHCFGC 64 I I+++ + DI+D++ VKL+K+G+N+ CPFH+EKTPSF+V+ EKQ HCFGC Sbjct: 3 IEPELIHEIQQKNDILDVVSQYVKLEKRGRNYIGLCPFHDEKTPSFSVSVEKQICHCFGC 62 Query: 65 GAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAGSGPSQIERHQRQTLYQLMDGLN 124 GN F+ + + F+E V+ L +EV + + + E+++ + + + + Sbjct: 63 KKGGNVFQFIEQIEAISFIEAVKILGERAGIEVKTDDDTPQADNEQNK---MIAMHEAMA 119 Query: 125 TFYQQSLQQ-PVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLI 183 +Y L+ A A +YL RG + E IAR IG++P + Sbjct: 120 HYYNYVLKAIEQAEPALKYLYSRGFTDEQIAREKIGYSPNVSTFTRDYLKNKGYDEALAY 179 Query: 184 DAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKG 242 DAG+L N++ +DRFR R+MFPI+D RG+VIGF R + PKYLNSPET IF K Sbjct: 180 DAGLLSRNEETISYFDRFRNRIMFPIKDFRGKVIGFSARSIDGSEPKYLNSPETLIFQKR 239 Query: 243 RQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATN 302 LY + A++ + ++++EG+MDV+ L + GI A+A++GT+ + +HI L + + Sbjct: 240 NVLYHIDVARKPIRNQDEVILLEGFMDVLKLNEAGILNAIATMGTALSREHILQLKKLAS 299 Query: 303 NVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKEAFEARM 362 N+ YDGDRAG +A + + +G + + + G DPD ++ + G + F + Sbjct: 300 NITLMYDGDRAGIEATLKIGK---QLNQEGMNVFVVPMKKGYDPDEMITELGTDKFLSYF 356 Query: 363 E-QAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGI 421 + +F + ++ + + + + E L+ + E+ + Sbjct: 357 NHNKLTYVSFYMRHYLDEIKNNDL-AYEKHLNNIIEDAKLMNSEHLQKKVLHEITELFNV 415 Query: 422 LDDSQLERLMPKAAESGVSRPVPQLKRT----TMRILIGLLVQNPELATLVPPLENLDEN 477 DS ++ + R ++ + + L + Sbjct: 416 DFDSLKFKVQKDNRIQARMPTFESEVLSRPMLAERTVLKYFMNDRMLFMQFKDQITEEHF 475 Query: 478 KLPGLGLFRELVNTCLSQPGLTTGQLLEHYRGTNNAATLEKLSMWDDIADKNIAEQTFTD 537 + + + ++ T L + + L + + + + + D Sbjct: 476 SVKVHQMIYKALSGYYKIEE--TFMLSKFSSHVPHECHETCLKIDAMLVNHEPSIEEVND 533 Query: 538 SLNHMFDSLLELRQEELIARERTHGLSNEERLELWTLNQE---LAKK 581 L E+ Q + + + + +S E + L +E L ++ Sbjct: 534 YLYVFQQEPKEIEQLQSLKAQLSDAVSTENHEKRAQLMREIINLQRQ 580 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.141 0.381 Lambda K H 0.267 0.0433 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,193,362,859 Number of Sequences: 3077464 Number of extensions: 140858341 Number of successful extensions: 499213 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1832 Number of HSP's successfully gapped in prelim test: 1954 Number of HSP's that attempted gapping in prelim test: 481984 Number of HSP's gapped (non-prelim): 9404 length of query: 581 length of database: 1,040,396,356 effective HSP length: 134 effective length of query: 447 effective length of database: 628,016,180 effective search space: 280723232460 effective search space used: 280723232460 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 96 (41.5 bits)