 |
| Job Description | P75974 | | Confidence | 60.53% | Date | Thu Jan 5 12:16:42 GMT 2012 |
| Rank | 294 | Aligned Residues | 68 |
| % Identity | 12% | Template | d2fd5a1 |
| SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Tetracyclin repressor-like, N-terminal domain
|
| Resolution | 1.70 |
|
 |
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | K | T | I | H | D | I | R | R | S | N | A | . |
. |
. |
. |
R | K | L | R | D | G | V | G | . |
. |
. |
. |
G | N | S | S | F | A | T | M | I | D | R | E | P | T | Q | T | S | R | F | M | G | D | G | A | T | K | N | I | G | D | S | M | A | R | H | I | E | K | C | F | D | L | P | V | G | W | L | D | Q | E |
| Query Conservation |   |
|   |
|   |   |
|
|
|   |   |   |
| . | . | . | . |
|   |
|   |   |   |   |
| . | . | . | . |
|
|   |   |
|
|   |   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|
|   |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |
| . | . |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
| Template Sequence |   |
M | S | D | K | K | T | Q | T | R | A | R | I | L | G | A | A | T | Q | A | L | L | E | R | G | A | V | E | P | S | V | G | E | V | M | G | A | A | G | L | T | V | G | G | F | Y | A | H | F | Q | S | K | . |
. |
D | A | L | M | L | E | A | F | E | Q | L | L | G | K | R | R | E | L | L | G | E | L | D | P | G |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S |
|
|  |  |  |  |  |  |  | T | T |
|
| G | G | G | G | G | G | T |
| S |
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|