Phyre 2 alignment of P0CF55 with c3ljlB_

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Job Description | P0CF55
Confidence | 87.60% | Date | Thu Jan 5 11:31:09 GMT 2012
Rank | 222 | Aligned Residues | 31
% Identity | 19% | Template | c3ljlB_
PDB info | PDB header:transcription regulator | Chain: B: PDB Molecule:transcriptional regulator luxt; | PDBTitle: the crystal structure of the full-length transcriptional regulator2 luxt from vibrio parahaemolyticus rimd 2210633.
Resolution | 3.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | M | D | S | A | R | A | L | I | A | R | . | . | . | . | G | W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | X | D | A | V | V | D | Q | L | L | R | L | G | Y | D | K | X | S | Y | T | T | L | S | Q | Q | T | G | V | S | R | T | G | I | S | H | H
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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