Phyre 2 alignment of P0CF55 with d1r8ea1

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Job Description | P0CF55
Confidence | 76.37% | Date | Thu Jan 5 11:31:09 GMT 2012
Rank | 333 | Aligned Residues | 23
% Identity | 22% | Template | d1r8ea1
SCOP info | Putative DNA-binding domain | Putative DNA-binding domain | DNA-binding N-terminal domain of transcription activators
Resolution | 2.40

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | A | R | G | W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | E | S | Y | Y | S | I | G | E | V | S | K | L | A | N | V | S | I | K | A | L | R | Y | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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