Phyre 2 alignment of P0CF55 with d2h6ca1

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Job Description | P0CF55
Confidence | 39.47% | Date | Thu Jan 5 11:31:09 GMT 2012
Rank | 442 | Aligned Residues | 23
% Identity | 4% | Template | d2h6ca1
SCOP info | DNA/RNA-binding 3-helical bundle | "Winged helix" DNA-binding domain | CAP C-terminal domain-like
Resolution | 2.90

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I | L | R | R
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Template Sequence |  | L | S | Q | K | S | I | G | E | I | T | G | A | H | H | V | T | V | S | K | V | L | A | C
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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