Phyre 2 alignment of P0CF55 with d1d5ya2

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Job Description | P0CF55
Confidence | 26.27% | Date | Thu Jan 5 11:31:09 GMT 2012
Rank | 491 | Aligned Residues | 24
% Identity | 4% | Template | d1d5ya2
SCOP info | DNA/RNA-binding 3-helical bundle | Homeodomain-like | AraC type transcriptional activator
Resolution | 2.70

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | M | D | S | A | R | A | L | I | A | R | G | . | W | G | V | S | L | V | S | R | C | L | R | V | S
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Template Sequence |  | L | S | K | S | A | V | A | L | R | L | T | A | R | P | I | L | D | I | A | L | Q | Y | R | F | D
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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