14/01/2012 22:05:23 : INFO  : Run start: Sat Jan 14 22:05:22 GMT 2012
14/01/2012 22:05:26 : INFO  : Initialised job
14/01/2012 22:05:27 : INFO  : Renaming log file 'phyre2_20120114_220521.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/phyre_20120114_220521.log'
14/01/2012 22:05:28 : INFO  : Initialised job:
Sequence
>batch____
MDSARALIARGWGVSLVSRCLRVSRAQLHVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPAVPPSKRAHTGRV
AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV
ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE
I

14/01/2012 22:05:29 : INFO  : Checked sequence
14/01/2012 22:05:30 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 22:05:31 : INFO  : PSI-BLAST 3 iterations
14/01/2012 22:07:17 : INFO  : PSI-BLAST 5 iterations
14/01/2012 22:09:34 : INFO  : Finished PSI-BLAST
14/01/2012 22:09:36 : INFO  : Running Buildali to generate a3m file
14/01/2012 22:20:11 : INFO  : Converting to HMM
14/01/2012 22:20:16 : INFO  : Calibrating HMM
14/01/2012 22:20:30 : INFO  : Searching HMM database
14/01/2012 22:27:27 : INFO  : Finished buildali
14/01/2012 22:27:28 : INFO  : Predicting secondary structure
14/01/2012 22:27:33 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 22:27:35 : INFO  : Predicting Disordered regions
14/01/2012 22:27:38 : INFO  : Predicted Disorder (Disopred)
14/01/2012 22:27:39 : INFO  : Running memsat_svm check
14/01/2012 22:29:28 : INFO  : Globular protein
14/01/2012 22:29:29 : INFO  : Predicted Transmembrane (memsat_svm) ID '8f12e1679e1d2f94'
14/01/2012 22:29:30 : INFO  : Initialising fold library search
14/01/2012 22:29:33 : INFO  : Initialised search input
14/01/2012 22:29:35 : INFO  : Building Ensemble models
14/01/2012 22:29:38 : INFO  : Building hh.c3f9kV_.model.1.pdb
14/01/2012 22:29:50 : INFO  : Building hh.d1asua_.model.2.pdb
14/01/2012 22:30:01 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.d1asua_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/d1asua_.2.pdb
14/01/2012 22:30:04 : INFO  : Building hh.c1c0mA_.model.3.pdb
14/01/2012 22:30:14 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.c1c0mA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/c1c0mA_.3.pdb
14/01/2012 22:30:17 : INFO  : Building hh.d1c0ma2.model.4.pdb
14/01/2012 22:30:27 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.d1c0ma2.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/d1c0ma2.4.pdb
14/01/2012 22:30:30 : INFO  : Building hh.c3nf9A_.model.5.pdb
14/01/2012 22:30:38 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.c3nf9A_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/c3nf9A_.5.pdb
14/01/2012 22:30:42 : INFO  : Building hh.d1exqa_.model.6.pdb
14/01/2012 22:30:50 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.d1exqa_.model.6.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/d1exqa_.6.pdb
14/01/2012 22:30:53 : INFO  : Building hh.c3hosA_.model.7.pdb
14/01/2012 22:31:00 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/hh.c3hosA_.model.7.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8f12e1679e1d2f94/c3hosA_.17.pdb
14/01/2012 22:31:04 : INFO  : Building c3f9kV_.1.pdb
14/01/2012 22:31:16 : INFO  : Building d1asua_.2.pdb
14/01/2012 22:31:25 : INFO  : Building c1c0mA_.3.pdb
14/01/2012 22:31:35 : INFO  : Building d1c0ma2.4.pdb
14/01/2012 22:31:44 : INFO  : Building c3nf9A_.5.pdb
14/01/2012 22:31:55 : INFO  : Building d1exqa_.6.pdb
14/01/2012 22:32:07 : INFO  : Building d1bcoa2.7.pdb
14/01/2012 22:32:16 : INFO  : Building c1ex4A_.8.pdb
14/01/2012 22:32:25 : INFO  : Building c3kksB_.9.pdb
14/01/2012 22:32:35 : INFO  : Building d1cxqa_.10.pdb
14/01/2012 22:32:45 : INFO  : Building d1hyva_.11.pdb
14/01/2012 22:32:55 : INFO  : Building c1k6yB_.12.pdb
14/01/2012 22:33:04 : INFO  : Building c3hpgC_.13.pdb
14/01/2012 22:33:13 : INFO  : Building c1bcoA_.14.pdb
14/01/2012 22:33:22 : INFO  : Building c3l2tB_.15.pdb
14/01/2012 22:33:32 : INFO  : Building d1c6va_.16.pdb
14/01/2012 22:33:41 : INFO  : Building c3hosA_.17.pdb
14/01/2012 22:33:52 : INFO  : Building c3dlrA_.18.pdb
14/01/2012 22:34:03 : INFO  : Building c6paxA_.19.pdb
14/01/2012 22:34:14 : INFO  : Building d1pdnc_.20.pdb
14/01/2012 22:35:40 : INFO  : Finished HH model building
14/01/2012 22:35:41 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 22:36:32 : INFO  : html domain output complete ID '8f12e1679e1d2f94'
14/01/2012 23:09:31 : INFO  : Run end  : Sat Jan 14 23:09:30 GMT 2012
