Phyre 2 alignment of P0CF55 with c2k9sA_

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Job Description | P0CF55
Confidence | 46.40% | Date | Thu Jan 5 11:31:09 GMT 2012
Rank | 427 | Aligned Residues | 24
% Identity | 17% | Template | c2k9sA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:arabinose operon regulatory protein; | PDBTitle: solution structure of dna binding domain of e. coli arac
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | W | G | V | S | L | V | S | R | C | L | R | V | S | R | A | Q | L | H | V | I | L | R | R | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | F | D | I | A | S | V | A | Q | H | V | C | L | S | P | S | R | L | S | H | L | F | R | Q | Q
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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