5 c1s3sA_ Probab=100.00  E-value=0  Score=404.92  Aligned_columns=244  Identities=45%

Q ss_pred             CCCCCCCCHHHHHCCHHHHHHHHHHHH-HHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
Q ss_conf             467888679885144899999999999-7328787874789998716852888874899999999751997999666888
Q batch____       143 TEDQIKTTFADVAGCDEAKEEVAELVE-YLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDF  221 (644)
Q Consensus       143 ~~~~~~~~f~di~G~~~~k~~l~eiv~-~l~~~~~~~~~g~~~p~gvLL~GppGtGKT~la~aiA~e~~~~~~~is~s~~  221 (644)
                      ....+.++|+||+|++++|++|++.+. ++++|+.|+++|..+|+|+|||||||||||++++++|.+++.+|+.++|+++
T Consensus       173 ~~~~~~~~~~dIgGl~~~k~~l~~~i~~pl~~~~~~~~~g~~~~~~~Ll~Gp~G~GKt~l~~~ia~~~~~~~~~i~~~~l  252 (436)
T c1s3sA_         173 EESLNEVGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI  252 (436)
T ss_dssp             CCCTTSCCGGGCCSCHHHHHHHHHHHHHHHHCTTHHHHCCCCCCCEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEHHHH
T ss_pred             CCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHH
T ss_conf             12356789534205499999999999975018898974889987538986799899789999998744995899730687


Q ss_pred             HHHCCCCHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH
Q ss_conf             22104817899999999997418929994330564102568887760899999999999862556779889999619945
Q batch____       222 VEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD  301 (644)
Q Consensus       222 ~~~~~g~~~~~i~~~F~~A~~~~P~IifiDEiD~i~~~R~~~~~~~~~~~~~~l~~lL~~ldg~~~~~~vivi~aTN~~~  301 (644)
                      .++++|+++.+++.+|+.|+.++||||||||+|+++++|+.+.+....   +++++++.++|+.....+|+|||+||+++
T Consensus       253 ~~~~~g~~e~~l~~~f~~a~~~~p~ii~lDeid~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~vi~tt~~~~  329 (436)
T c1s3sA_         253 MSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER---RIVSQLLTLMDGLKQRAHVIVMAATNRPN  329 (436)
T ss_dssp             HTSCTTHHHHHHHHHHHHHHHTCSEEEEEETGGGTCCCSSSCCCTTHH---HHHHHHHHHHHHCCGGGCEEEEEEESCGG
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCHHHH---HHHHHHHHHHCCCCCCCCEEEEEECCCHH
T ss_conf             001001588889999999975099489840000321025788745889---99999986430222469879998448958


Q ss_pred             HCCHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC------
Q ss_conf             75978727664523897079998999999999856888887113798998678998899999999999999985------
Q batch____       302 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARG------  375 (644)
Q Consensus       302 ~lD~AllRpGRfd~~i~v~~P~~~~R~~Il~~~l~~~~~~~~~dl~~la~~t~G~sgadl~~l~~~Aa~~a~r~------  375 (644)
                      .||++|+||||||++|++++||.++|.+||+.++++.++.+++|+..||++|+||||+||.++|++|++.|+++      
T Consensus       330 ~l~~~l~r~~rf~~~i~~~~P~~~~R~~Il~~~~~~~~l~~d~~~~~la~~t~g~~~~dl~~l~~~a~~~a~~r~~~~~~  409 (436)
T c1s3sA_         330 SIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLID  409 (436)
T ss_dssp             GSCGGGTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSEECTTCCHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred             HCCHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             88824204240303666789899999999999843898988668788998768998899999999999999998886402


Q ss_pred             -----------CCCCCCHHHHHHHH
Q ss_conf             -----------98644989999999
Q batch____       376 -----------NKRVVSMVEFEKAK  389 (644)
Q Consensus       376 -----------~~~~i~~~d~~~a~  389 (644)
                                 ....|+++||++|+
T Consensus       410 ~~~~~~~~~~~~~~~v~~~df~~al  434 (436)
T c1s3sA_         410 LEDETIDAEVMNSLAVTMDDFRWAL  434 (436)
T ss_dssp             CSSCCCBHHHHHHCEECHHHHHHHH
T ss_pred             HHHHCCCHHHHHCCCCCHHHHHHHH
T ss_conf             0021038766730101699899886