29 c1in8A_ Probab=99.96   E-value=1.1e-26  Score=195.41  Aligned_columns=247  Identities=20%

Q ss_pred             CCCHHHHHCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHCCC
Q ss_conf             86798851448999999999997328787874789998716852888874899999999751997999666888221048
Q batch____       148 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVG  227 (644)
Q Consensus       148 ~~~f~di~G~~~~k~~l~eiv~~l~~~~~~~~~g~~~p~gvLL~GppGtGKT~la~aiA~e~~~~~~~is~s~~~~~~~g  227 (644)
                      ..+|+||+|.+++++.|+..+...+..       ..+|+++||+||||||||++|+++|++++.+++.++++++......
T Consensus         5 p~~~~d~iG~e~~~~~L~~~i~~~~~~-------~~~~~~ill~GppGtGKT~la~~ia~~l~~~~~~i~~~~~~~~~~~   77 (298)
T c1in8A_           5 PKSLDEFIGQENVKKKLSLALEAAKMR-------GEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDM   77 (298)
T ss_dssp             CSSGGGCCSCHHHHHHHHHHHHHHHHH-------TCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSHHHH
T ss_pred             CCCHHHHCCHHHHHHHHHHHHHHHHHC-------CCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
T ss_conf             999778127099999999999998633-------8888857998698898889999999970997999941553320124


Q ss_pred             CHHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC-CCEEEEEECCCHHHCCHH
Q ss_conf             1789999999999741892999433056410256888776089999999999986255677-988999961994575978
Q batch____       228 VGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGN-EGIIVIAATNRPDVLDPA  306 (644)
Q Consensus       228 ~~~~~i~~~F~~A~~~~P~IifiDEiD~i~~~R~~~~~~~~~~~~~~l~~lL~~ldg~~~~-~~vivi~aTN~~~~lD~A  306 (644)
                      .        ........++|+|+||+|.+...              ..+.|+..++..... ..++++..++.++.++++
T Consensus        78 ~--------~~~~~~~~~~il~~dei~~l~~~--------------~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  135 (298)
T c1in8A_          78 A--------AILTSLERGDVLFIDEIHRLNKA--------------VEELLYSAIEDFQIDIQPFTLVGATVRSGLLSSP  135 (298)
T ss_dssp             H--------HHHHTCCTTCEEEEETGGGCCHH--------------HHHHHHHHHHHSCCCCCCCEEEEEESCGGGSCHH
T ss_pred             H--------HHHHHHCCCCEEEEEEHHHCCHH--------------HHHHHHHHHHCCCCCCCEEEECCCCCCHHHCCCH
T ss_conf             5--------66885137998999423676989--------------9999999970553344406652654585631464


Q ss_pred             HHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             72766452389707999899999999985688888-71137989986789988999999999999999859864498999
Q batch____       307 LLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLA-PDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF  385 (644)
Q Consensus       307 llRpGRfd~~i~v~~P~~~~R~~Il~~~l~~~~~~-~~~dl~~la~~t~G~sgadl~~l~~~Aa~~a~r~~~~~i~~~d~  385 (644)
                      .++  +|...+.++.|+.+++..|++.++.+.... ++..++.+++.+.| +++++.+++..+...|..++...|+.+++
T Consensus       136 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g-~~R~~~~ll~~~~~~~~~~~~~~i~~~~i  212 (298)
T c1in8A_         136 LRS--RFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVRDMLTVVKADRINTDIV  212 (298)
T ss_dssp             HHT--TCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHHHHHHHHTCSSBCHHHH
T ss_pred             HHH--HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf             332--344311367898999999999999982985588999999998399-98999999999999998529887698999


Q ss_pred             HHHHHHHHCCCCCCCCCCCHHHHHHHH---HHHHHHHHHHHHCC
Q ss_conf             999998723777766558988977999---99999999999818
Q batch____       386 EKAKDKIMMGAERRSMVMTEAQKESTA---YHEAGHAIIGRLVP  426 (644)
Q Consensus       386 ~~a~~~v~~g~~~~~~~~~~~~~~~~A---~HEAGHAlva~~l~  426 (644)
                      ..+++.+............+..+....   .|++|++.++..++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ia~~l~  256 (298)
T c1in8A_         213 LKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLG  256 (298)
T ss_dssp             HHHHHHHTCCTTCCCHHHHHHHHHHHHHSTTCCBCHHHHHHHHT
T ss_pred             HHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf             99997512551011146899999999981769547999999859