BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (50 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 100 3e-20 UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 85 8e-16 UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 47 2e-04 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 47 3e-04 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 45 0.001 UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 44 0.002 UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 43 0.003 UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp... 41 0.013 UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK... 40 0.016 UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini... 39 0.060 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 50/50 (100%), Positives = 50/50 (100%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 40/50 (80%), Positives = 44/50 (88%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVF YESE Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESE 69 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 +++ ++++C+T ++ +TRK LCE+ R G EVA F AYES Sbjct: 4 PRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYES 50 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 29/45 (64%) Query: 4 HKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 K ++ +LIVIC+T ++ + R LCE+HIR G E+A F A E Sbjct: 3 QKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACE 47 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/38 (47%), Positives = 26/38 (68%) Query: 12 IVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 ++ICIT ++ +TR LCE+ ++ GQ E A F AYES Sbjct: 13 LMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYES 50 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 1 MKQHK-AMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQ K A+ L+++C T ++ +TR LCEV ++ G EV AYES Sbjct: 1 MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYESN 51 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 30/46 (65%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +A+++ L +IC T ++ + R LCE+H R +TE+A AYE++ Sbjct: 4 RALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAK 49 >UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUJ6_AERS4 Length = 120 Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 K +V+L+++CITA+ + R LCE+ + G+TE+ + AYE++ Sbjct: 74 KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAK 119 >UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI Length = 49 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 28/48 (58%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +H ++V L++ICIT + L+TR+ L E+ R G EVA A S Sbjct: 2 KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR 49 >UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TZJ3_YERKR Length = 49 Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 22/32 (68%) Query: 13 VICITAVVAALVTRKDLCEVHIRTGQTEVAVF 44 +ICITAV+ + R LCEVHI+ G E+A F Sbjct: 10 MICITAVLIIWMIRHSLCEVHIKLGGAEIAAF 41 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 66 3e-10 UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 66 4e-10 UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 64 1e-09 UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 62 8e-09 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 60 2e-08 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 57 2e-07 Sequences not found previously or not previously below threshold: UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 49 6e-05 UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo... 46 5e-04 UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK... 46 5e-04 UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba... 44 0.002 UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob... 42 0.006 UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp... 41 0.008 UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX 41 0.012 UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr... 40 0.025 UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ... 39 0.041 UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba... 39 0.061 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 66.1 bits (160), Expect = 3e-10, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 +++ ++++C+T ++ +TRK LCE+ R G EVA F AYES Sbjct: 4 PRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYES 50 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 65.7 bits (159), Expect = 4e-10, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%) Query: 1 MKQHK-AMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQ K A+ L+++C T ++ +TR LCEV ++ G EV AYES Sbjct: 1 MKQPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYESN 51 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 64.2 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 40/50 (80%), Positives = 44/50 (88%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVF YESE Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESE 69 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 61.5 bits (148), Expect = 8e-09, Method: Composition-based stats. Identities = 50/50 (100%), Positives = 50/50 (100%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 60.0 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 4 HKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 + +++ICIT ++ +TR LCE+ ++ GQ E A F AYES Sbjct: 5 RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYES 50 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 57.3 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 K ++ +LIVIC+T ++ + R LCE+HIR G E+A F A E Sbjct: 2 PQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACE 47 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 48.8 bits (115), Expect = 6e-05, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +A+++ L +IC T ++ + R LCE+H R +TE+A AYE++ Sbjct: 2 PKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAK 49 >UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RJZ0_KLEP3 Length = 55 Score = 45.7 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHI 34 ++ ++++C+T + +TRK LCE+ Sbjct: 4 PPSNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35 >UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI Length = 49 Score = 45.7 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 28/47 (59%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 +H ++V L++ICIT + L+TR+ L E+ R G EVA A S Sbjct: 2 KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTS 48 >UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MPJ9_ENTS8 Length = 56 Score = 43.8 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 28/47 (59%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAY 47 MK ++ L ++CIT ++ AL+ + LCE+ IR+G EVA A Sbjct: 7 MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLAC 53 >UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C9Y1C5_CROTZ Length = 50 Score = 42.2 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAY 47 MK K + +V C+T ++ AL+ LCE+ I+ G EVA + Sbjct: 1 MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47 >UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUJ6_AERS4 Length = 120 Score = 41.5 bits (96), Expect = 0.008, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 K +V+L+++CITA+ + R LCE+ + G+TE+ + AYE++ Sbjct: 74 KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAK 119 >UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX Length = 50 Score = 41.1 bits (95), Expect = 0.012, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 24/46 (52%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 + ++ LIVIC+T + + R LC + ++ G T + AYE Sbjct: 2 PQRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYE 47 >UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A7MEL1_ENTS8 Length = 52 Score = 39.9 bits (92), Expect = 0.025, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 24/43 (55%) Query: 6 AMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 I +I++C+T ++ ++R+ LCE+ +R E+ A + Sbjct: 7 TFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACK 49 >UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D675_VIBVU Length = 65 Score = 39.2 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 K + AL+V+CITAV+ + LC++ + Q ++++ AYE Sbjct: 18 PKKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYE 63 >UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223 RepID=B8EG05_SHEB2 Length = 68 Score = 38.8 bits (89), Expect = 0.061, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 M + K ++L ++C T + A + R DLC+V R G + V AYE Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYE 65 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX 68 1e-10 UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9... 65 1e-09 UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root R... 62 5e-09 UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI 61 1e-08 UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID... 60 2e-08 UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronoba... 59 5e-08 UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Entero... 58 9e-08 UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax... 57 2e-07 UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOK... 55 1e-06 UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumo... 48 9e-05 Sequences not found previously or not previously below threshold: UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterob... 51 1e-05 UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX 43 0.003 UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp... 43 0.003 UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammapr... 43 0.004 UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio ... 42 0.008 UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Esc... 39 0.041 UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=... 39 0.043 UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella ba... 38 0.068 UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersini... 38 0.091 >UniRef50_P11895 Protein hok n=34 Tax=root RepID=HOK_ECOLX Length = 52 Score = 67.6 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 +++ ++++C+T ++ +TRK LCE+ R G EVA F AYES Sbjct: 4 PRSSLVWCVLIVCLTLLIFTYLTRKSLCEIRYRDGHREVAAFMAYES 50 >UniRef50_Q9F578 YaeB protein n=8 Tax=Enterobacteriaceae RepID=Q9F578_ECOLX Length = 53 Score = 64.5 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 27/49 (55%) Query: 2 KQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 + A+ L+++C T ++ +TR LCEV ++ G EV AYES Sbjct: 3 QPKNALTWCLLIVCCTLLIFTYLTRNRLCEVRLKDGDREVTASLAYESN 51 >UniRef50_C8TT42 Regulatory protein MokC for HokC n=40 Tax=root RepID=C8TT42_ECO26 Length = 70 Score = 62.2 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 40/50 (80%), Positives = 44/50 (88%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQ KAM++ALIVIC+T +V ALVTRKDLCEV IRTGQTEVAVF YESE Sbjct: 20 MKQQKAMLIALIVICLTVIVTALVTRKDLCEVRIRTGQTEVAVFVDYESE 69 >UniRef50_P0ACG4 Protein hokC n=80 Tax=Bacteria RepID=HOKC_ECOLI Length = 50 Score = 60.7 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 50/50 (100%), Positives = 50/50 (100%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE Sbjct: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 >UniRef50_C9Y3Z0 Protein hok n=2 Tax=Cronobacter turicensis RepID=C9Y3Z0_CROTZ Length = 52 Score = 59.9 bits (144), Expect = 2e-08, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 4 HKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYES 49 + +++ICIT ++ +TR LCE+ ++ GQ E A F AYES Sbjct: 5 RSTLFWCVLMICITLLMFTFLTRHSLCELRLKDGQREFAAFLAYES 50 >UniRef50_A7MPJ9 Putative uncharacterized protein n=2 Tax=Cronobacter RepID=A7MPJ9_ENTS8 Length = 56 Score = 59.1 bits (142), Expect = 5e-08, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 29/50 (58%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 MK ++ L ++CIT ++ AL+ + LCE+ IR+G EVA A + Sbjct: 7 MKPLHYLLACLFMVCITILIFALMNQGTLCELTIRSGSQEVAAKLACTGK 56 >UniRef50_D2TJU7 Small toxic membrane protein HokA n=2 Tax=Enterobacteriaceae RepID=D2TJU7_CITRO Length = 50 Score = 58.0 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 30/48 (62%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 K ++ +LIVIC+T ++ + R LCE+HIR G E+A F A E + Sbjct: 2 PQKCILCSLIVICLTILLFTWMVRDSLCELHIRQGNNELAAFLACEVK 49 >UniRef50_UPI0001C3405D hypothetical protein EcanA3_00680 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C3405D Length = 50 Score = 56.8 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +A+++ L +IC T ++ + R LCE+H R +TE+A AYE++ Sbjct: 2 PKRALLLGLFLICTTLLIFTWMVRDSLCELHFRQEKTELAAVLAYEAK 49 >UniRef50_P77494 Protein hokB n=10 Tax=Escherichia coli RepID=HOKB_ECOLI Length = 49 Score = 54.5 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 19/48 (39%), Positives = 28/48 (58%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +H ++V L++ICIT + L+TR+ L E+ R G EVA A S Sbjct: 2 KHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALMACTSR 49 >UniRef50_C9Y1C5 Putative uncharacterized protein n=2 Tax=Enterobacteriaceae RepID=C9Y1C5_CROTZ Length = 50 Score = 50.7 bits (120), Expect = 1e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 25/47 (53%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAY 47 MK K + +V C+T ++ AL+ LCE+ I+ G EVA + Sbjct: 1 MKPLKYLFACFVVFCVTILIFALINHGTLCELTIKQGNKEVAARLSC 47 >UniRef50_B5RJZ0 Hok/Gef family protein n=1 Tax=Klebsiella pneumoniae 342 RepID=B5RJZ0_KLEP3 Length = 55 Score = 48.0 bits (113), Expect = 9e-05, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 18/32 (56%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHI 34 ++ ++++C+T + +TRK LCE+ Sbjct: 4 PPSNLLWCVLIVCLTLLAFTYLTRKSLCEIRY 35 >UniRef50_P16477 Protein pndA n=65 Tax=root RepID=PNDA2_ECOLX Length = 50 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 25/48 (52%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 + ++ LIVIC+T + + R LC + ++ G T + AYE + Sbjct: 2 PQRTFLMMLIVICVTILCFVWMVRDSLCGLRLQQGNTVLVATLAYEVK 49 >UniRef50_A4SUJ6 SrnB protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SUJ6_AERS4 Length = 120 Score = 43.0 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 31/46 (67%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 K +V+L+++CITA+ + R LCE+ + G+TE+ + AYE++ Sbjct: 74 KTAVVSLLIVCITALGVISLVRDSLCELEVHQGETEIRLNLAYEAK 119 >UniRef50_A7MEL1 Putative uncharacterized protein n=3 Tax=Gammaproteobacteria RepID=A7MEL1_ENTS8 Length = 52 Score = 42.6 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 I +I++C+T ++ ++R+ LCE+ +R E+ A + Sbjct: 6 NTFIWCIIIVCVTVIMFTTLSRETLCELRLRGAGMEIVASLACK 49 >UniRef50_Q8D675 Putative uncharacterized protein n=1 Tax=Vibrio vulnificus RepID=Q8D675_VIBVU Length = 65 Score = 41.8 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 27/46 (58%) Query: 3 QHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 K + AL+V+CITAV+ + LC++ + Q ++++ AYE Sbjct: 18 PKKTALAALVVVCITAVILTALYTGSLCDIRYKDQQNDLSIKLAYE 63 >UniRef50_Q1RBZ5 Putative uncharacterized protein hok n=1 Tax=Escherichia coli UTI89 RepID=Q1RBZ5_ECOUT Length = 163 Score = 39.1 bits (90), Expect = 0.041, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 17 TAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 T + +TR+ L E+ R G EVA A S Sbjct: 131 TILTFT-LTRQSLYELRFRDGDKEVAALMACTSR 163 >UniRef50_Q8XBW9 Protein hokE n=102 Tax=Enterobacteriaceae RepID=HOKE_ECO57 Length = 50 Score = 39.1 bits (90), Expect = 0.043, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%) Query: 5 KAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 K +VA+IV+C+T + L+ LCE ++ E AYE + Sbjct: 4 KYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPK 49 >UniRef50_B8EG05 Hok/gef cell toxic protein n=2 Tax=Shewanella baltica OS223 RepID=B8EG05_SHEB2 Length = 68 Score = 38.3 bits (88), Expect = 0.068, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 26/48 (54%) Query: 1 MKQHKAMIVALIVICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYE 48 M + K ++L ++C T + A + R DLC+V R G + V AYE Sbjct: 18 MPKRKTTTLSLAIVCFTLLAALALIRDDLCKVEYRNGAMLLNVVLAYE 65 >UniRef50_C4TZJ3 Putative uncharacterized protein n=1 Tax=Yersinia kristensenii ATCC 33638 RepID=C4TZJ3_YERKR Length = 49 Score = 38.0 bits (87), Expect = 0.091, Method: Composition-based stats. Identities = 17/38 (44%), Positives = 24/38 (63%) Query: 13 VICITAVVAALVTRKDLCEVHIRTGQTEVAVFTAYESE 50 +ICITAV+ + R LCEVHI+ G E+A F + + Sbjct: 10 MICITAVLIIWMIRHSLCEVHIKLGGAEIAAFLQCKQQ 47 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.322 0.150 0.419 Lambda K H 0.267 0.0463 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 266,910,234 Number of Sequences: 3077464 Number of extensions: 6577741 Number of successful extensions: 28866 Number of sequences better than 1.0e-01: 23 Number of HSP's better than 0.1 without gapping: 55 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 28811 Number of HSP's gapped (non-prelim): 56 length of query: 50 length of database: 1,040,396,356 effective HSP length: 23 effective length of query: 27 effective length of database: 969,614,684 effective search space: 26179596468 effective search space used: 26179596468 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.3 bits) S2: 87 (37.9 bits)