53 c2imrA_ Probab=100.00  E-value=1.6e-33  Score=225.85  Aligned_columns=343  Identities=17%

Q ss_pred             ECCEEECCCC--CEEEECCCEEEECCEEEEECCCCCCC-CCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf             6678976899--82600721899799999951787888-89877998879988435060110564445443323443136
Q batch____         5 KNVTAVQLHP--AKVQEGVDIAIENDVIVAIGDALTQR-YPDASFKEMHGRIVMPGIVCSHNHFYSGLSRGIMANIAPCP   81 (442)
Q Consensus         5 kNa~Iv~~~~--~~v~~~~~V~I~~G~I~~Ig~~~~~~-~~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~~~~~~~   81 (442)
                      .+.+|+|.+.  ..++++++|+|+||||++||+..+.. .++++|||++|++|+|||||+|+|+.+........+.....
T Consensus         1 ~~~~i~t~d~~~~g~~~~gaV~I~dgrI~~vg~~~~~~~~~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~   80 (380)
T c2imrA_           1 HTPRLLTCDVLYTGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAGAVIAPPPVNAHTHLDMSAYEFQALPYFQWI   80 (380)
T ss_dssp             CCEEEEEESEEECCEESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECCSEESSCCCEEEEESSCCHHHHHHCHHHHTS
T ss_pred             CCCEEEECCCCCCCCCCCCCEEEECCEEEEECCHHHCCCCCCCEEEECCCCEEECCCCHHHHCCCCCCCCCCCCCHHHHH
T ss_conf             99748956520158435850899899999961722246668877998889988425152000322235554576533333


Q ss_pred             HHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
Q ss_conf             78887512525135669999999999999999996598099427776645335799999620004970885213336665
Q batch____        82 DFISTLKNLWWRLDRALDEESLYYSGLICSLEAIKSGCTSVIDHHASPAYIGGSLSTLRDAFLKVGLRAMTCFETTDRNN  161 (442)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (442)
                      .......          ................+..+.+++.+....       ...........+.+............
T Consensus        81 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (380)
T c2imrA_          81 PEVVIRG----------RHLRGVAAAQAGADTLTRLGAGGVGDIVWA-------PEVMDALLAREDLSGTLYFEVLNPFP  143 (380)
T ss_dssp             HHHHHHH----------TTCCHHHHHHHHHHHHHHTTCCCEEEEECS-------HHHHHHHHTCTTCCEEEEEEECBCCG
T ss_pred             HHHHHCC----------CCHHHHHHHHHHHHHHHHCCCCCCHHHHHH-------HHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             4332034----------301367889888999997599651022210-------37788775314665011101135765


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
Q ss_conf             31024665687899999999887412666414665326644468989987899999984997278404784789999987
Q batch____       162 GIKELQEGVEENIRFARLIDEAKKATSEPYLVEAHIGAHAPFTVPDAGLEMLREAVKATGRGLHIHAAEDLYDVSYSHHW  241 (442)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~h~~~~~~~~~~~~~~  241 (442)
                      ....       ............................................+.+.+.++..|+.+...+.......
T Consensus       144 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~h~~~~~~~~~~~~~~  216 (380)
T c2imrA_         144 DKAD-------EVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTG  216 (380)
T ss_dssp             GGHH-------HHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHS
T ss_pred             CCHH-------HHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCC
T ss_conf             4246-------666767886677753035553101113554456968899999999976987999728998899998703


Q ss_pred             CC--------------------------CCHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCEEEECCHHHHHHC-
Q ss_conf             09--------------------------988899996899766436520343899999999844985995730445402-
Q batch____       242 YG--------------------------KDLLARLAQFDLIDSKTLVAHGLYLSKDDITLLNQRDAFLVHNARSNMNNH-  294 (442)
Q Consensus       242 ~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-  294 (442)
                      .+                          ...++++.+.+.........++.+..++.++++++.+.....+|..+.... 
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (380)
T c2imrA_         217 GGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNHHLEC  296 (380)
T ss_dssp             CSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCEEECHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHCCCCEEECCCHHHHHCC
T ss_conf             34146788766777764104421103311078999973986773133003228999999998529928973770675305


Q ss_pred             --CCHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH-HCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCE
Q ss_conf             --2468899789889997488877827889999999987-4299989999999983878986046656002357871668
Q batch____       295 --VGYNHHLSDIRNLALGTDGIGSDMFEEMKFAFFKHRD-AGGPLWPDSFAKALTNGNELMSRNFGAKFGLLEAGYKADL  371 (442)
Q Consensus       295 --~~~~~~~~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~-~~g~~~~~al~~~T~~~A~~~~~~~~~~~G~I~~G~~ADl  371 (442)
                        ..++.++++|+++++|||+++.+....+......... +.++|+.++++++|.|||+++++.-..++|+|++||+|||
T Consensus       297 ~~~~~~~l~~~Gv~v~~gsD~~~~~~~~~~~~~~~~~~~~~~gls~~~al~~~T~~pA~~lGl~~~~~~G~l~~G~~ADl  376 (380)
T c2imrA_         297 GTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQLYPGLDPRVLVRAAVKGGQRVVGTPFLRRGETWQEGFRWEL  376 (380)
T ss_dssp             CCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHCCCCCSTTSBCCGGGBGGG
T ss_pred             CHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             70218999988986999718888788889899999999985499989999998054799828756486001055620212