15/01/2012 07:35:26 : INFO  : Run start: Sun Jan 15 07:35:25 GMT 2012
15/01/2012 07:35:33 : INFO  : Initialised job
15/01/2012 07:35:34 : INFO  : Renaming log file 'phyre2_20120115_073524.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/phyre_20120115_073524.log'
15/01/2012 07:35:36 : INFO  : Initialised job:
Sequence
>batch____
MLSGKDLGRAIEQAINKKIASGSVKSKAEVARHFKVQPPSIYDWIKKGSISKDKLPELWR
FFSDVVGPEHWGLNEYPIPTPTNSDTKSELLDINNLYQAASDEIRAIVAFLLSGNATEPD
WVDHDVRAYIAAMEMKVGKYLKALESERKSQNITKTGT

15/01/2012 07:35:37 : INFO  : Checked sequence
15/01/2012 07:35:41 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 07:35:42 : INFO  : PSI-BLAST 3 iterations
15/01/2012 07:36:19 : INFO  : PSI-BLAST 5 iterations
15/01/2012 07:36:55 : INFO  : Finished PSI-BLAST
15/01/2012 07:36:58 : INFO  : Running Buildali to generate a3m file
15/01/2012 07:38:59 : INFO  : Converting to HMM
15/01/2012 07:39:01 : INFO  : Calibrating HMM
15/01/2012 07:39:14 : INFO  : Searching HMM database
15/01/2012 07:42:20 : INFO  : Finished buildali
15/01/2012 07:42:22 : INFO  : Predicting secondary structure
15/01/2012 07:42:33 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 07:42:35 : INFO  : Predicting Disordered regions
15/01/2012 07:42:39 : INFO  : Predicted Disorder (Disopred)
15/01/2012 07:42:41 : INFO  : Running memsat_svm check
15/01/2012 07:45:38 : INFO  : Running memsat_svm full
15/01/2012 07:49:05 : INFO  : Predicted Transmembrane (memsat_svm) ID '8eb80402d4271792'
15/01/2012 07:49:07 : INFO  : Initialising fold library search
15/01/2012 07:49:10 : INFO  : Initialised search input
15/01/2012 07:49:11 : INFO  : Building Ensemble models
15/01/2012 07:49:14 : INFO  : Building hh.c3bd1B_.model.1.pdb
15/01/2012 07:49:28 : INFO  : Building hh.c2fjrB_.model.2.pdb
15/01/2012 07:49:39 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/hh.c2fjrB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/c2fjrB_.3.pdb
15/01/2012 07:49:43 : INFO  : Building hh.c2kpjA_.model.3.pdb
15/01/2012 07:49:53 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/hh.c2kpjA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/c2kpjA_.4.pdb
15/01/2012 07:49:56 : INFO  : Building hh.c3op9A_.model.4.pdb
15/01/2012 07:50:07 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/hh.c3op9A_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/8eb80402d4271792/c3op9A_.5.pdb
15/01/2012 07:50:11 : INFO  : Building c3bd1B_.1.pdb
15/01/2012 07:50:26 : INFO  : Building c3bdnB_.2.pdb
15/01/2012 07:50:41 : INFO  : Building c2fjrB_.3.pdb
15/01/2012 07:50:56 : INFO  : Building c2kpjA_.4.pdb
15/01/2012 07:51:10 : INFO  : Building c3op9A_.5.pdb
15/01/2012 07:51:24 : INFO  : Building c3dnvB_.6.pdb
15/01/2012 07:51:38 : INFO  : Building d1r69a_.7.pdb
15/01/2012 07:51:52 : INFO  : Building d1sq8a_.8.pdb
15/01/2012 07:52:07 : INFO  : Building c3clcC_.9.pdb
15/01/2012 07:52:20 : INFO  : Building d2croa_.10.pdb
15/01/2012 07:52:32 : INFO  : Building c3f52A_.11.pdb
15/01/2012 07:52:44 : INFO  : Building d1y9qa1.12.pdb
15/01/2012 07:52:54 : INFO  : Building d1llib_.13.pdb
15/01/2012 07:53:07 : INFO  : Building d1b0na2.14.pdb
15/01/2012 07:53:19 : INFO  : Building d2a6ca1.15.pdb
15/01/2012 07:53:32 : INFO  : Building c2ef8A_.16.pdb
15/01/2012 07:53:45 : INFO  : Building d2b5aa1.17.pdb
15/01/2012 07:54:00 : INFO  : Building d1adra_.18.pdb
15/01/2012 07:54:11 : INFO  : Building d1y7ya1.19.pdb
15/01/2012 07:54:23 : INFO  : Building c3ivpD_.20.pdb
15/01/2012 07:55:35 : INFO  : Finished HH model building
15/01/2012 07:55:37 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 07:56:37 : INFO  : html domain output complete ID '8eb80402d4271792'
15/01/2012 08:05:31 : INFO  : Run end  : Sun Jan 15 08:05:30 GMT 2012
