Phyre 2 alignment of P76062 with d3orca_

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Job Description | P76062
Confidence | 32.52% | Date | Thu Jan 5 12:18:01 GMT 2012
Rank | 87 | Aligned Residues | 23
% Identity | 22% | Template | d3orca_
SCOP info | lambda repressor-like DNA-binding domains | lambda repressor-like DNA-binding domains | Phage repressors
Resolution | 3.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | K | A | E | V | A | R | H | F | K | V | Q | P | P | S | I | Y | D | W | I | K | K | G | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | Q | T | K | T | A | K | D | L | G | V | Y | Q | S | A | I | N | K | A | I | H | A | G | R
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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