38 d1nksa_ Probab=98.62   E-value=2.7e-07  Score=65.60  Aligned_columns=177  Identities=13%

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             99961787567889999999998621688818998512310786784321344677885551389999999999749981
Q batch____        90 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPN  169 (316)
Q Consensus        90 IIgIaG~sgSGKTT~A~~L~~~L~~~~~~~~v~~is~D~f~~~~~~~~~~~~~~~~g~P~a~D~~ll~~~L~~L~~g~~~  169 (316)
                      ||.|.|++||||||+|+.|+..|+..+  ..+..++.++++  ............++.............+..+......
T Consensus         3 iI~i~G~~GsGKsTl~~~L~~~l~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (194)
T d1nksa_           3 IGIVTGIPGVGKSTVLAKVKEILDNQG--INNKIINYGDFM--LATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAE   78 (194)
T ss_dssp             EEEEEECTTSCHHHHHHHHHHHHHTTT--CCEEEEEHHHHH--HHHHHTTTSCSSHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHCCCC--CCEEEEECCHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf             999988899998899999999821149--967998465036--7776530002448987421000256789999999730


Q ss_pred             EEEECCCCCCCCCCCCCEEECCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCC-CEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             243124434587378851772799689996722137812243112542014443-4289862898897888789999986
Q batch____       170 VTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFV-DFSIYVDAPEDLLQTWYINRFLKFR  248 (316)
Q Consensus       170 V~~P~yd~~~~~~~~~~~~~~~~~dIIIiEGi~~L~~~~~~~~~~~~~~v~d~~-D~~Ifida~~d~~~~w~i~R~~~lr  248 (316)
                                       ........++++++....................... |+.++++++.+.+..|+..|..   
T Consensus        79 -----------------~~~~~~~~~vi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~---  138 (194)
T d1nksa_          79 -----------------EARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKRDTT---  138 (194)
T ss_dssp             -----------------HHHHTCSSEEEEEECSEEEETTEEEESSCHHHHHHHCCSEEEEEECCHHHHHHHHHHCTT---
T ss_pred             -----------------HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCC---
T ss_conf             -----------------254247987997591033787656653212333113652377605998999999972014---


Q ss_pred             HHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHCCEEEEEECCC
Q ss_conf             6511203567877507898899999999986305567886120131046299972799
Q batch____       249 EGAFTDPDSYFHNYAKLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSAN  306 (316)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~w~~~~~p~~~e~I~Ptr~~ADlIi~~~~d  306 (316)
                                 ..+.....+...+......     ..+..........++.||.-+.+
T Consensus       139 -----------~~~~~~~~e~~~~~~~~~~-----~~~~~~~~~~~~~~~~vi~n~~~  180 (194)
T d1nksa_         139 -----------RNRNDYSDESVILETINFA-----RYAATASAVLAGSTVKVIVNVEG  180 (194)
T ss_dssp             -----------TCCCCCCSHHHHHHHHHHH-----HHHHHHHHHHHTCEEEEEECCSS
T ss_pred             -----------CCCCCCCHHHHHHHHHHHH-----HHHHHHHHHHCCCCEEEEECCCC
T ss_conf             -----------3444468789999999999-----99999875301798199998788