54 c3ch4B_ Probab=98.51   E-value=1.8e-07  Score=66.75  Aligned_columns=134  Identities=13%

Q ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             55673799961787567889999999998621688818998512310786784321344677885551389999999999
Q batch____        84 GQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDL  163 (316)
Q Consensus        84 ~~~~p~IIgIaG~sgSGKTT~A~~L~~~L~~~~~~~~v~~is~D~f~~~~~~~~~~~~~~~~g~P~a~D~~ll~~~L~~L  163 (316)
                      ......||||+|++||||||+|+.|...++...       ++.|.+..+..+.............+.....+....-...
T Consensus         7 ~~~pk~II~itG~~gsGKsTva~~L~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~   79 (188)
T c3ch4B_           7 GGAPRLVLLFSGKRKSGKDFVTEALQSRLGADV-------CAVLRLSGPLKEQYAQEHGLNFQYKEAFRKDMIRWGEEKR   79 (188)
T ss_dssp             BCCCSEEEEEEECTTSSHHHHHHHHHHHHCTTT-------EEEECTHHHHHHHHHHTTTCCCCCCSSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-------EEEEECCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             789818999988998688999999999607664-------3554112157776421024432210024898987678886


Q ss_pred             HCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf             74998124312443458737885177279968999672213781224311254201444342898628988978887899
Q batch____       164 KSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINR  243 (316)
Q Consensus       164 ~~g~~~V~~P~yd~~~~~~~~~~~~~~~~~dIIIiEGi~~L~~~~~~~~~~~~~~v~d~~D~~Ifida~~d~~~~w~i~R  243 (316)
                      ...............             +.+++|++|+.....-.........      .+..+++.++.+.+..|...|
T Consensus        80 ~~~~~~~~~~~~~~~-------------~~~~~ii~~i~~~~e~~~~~~~~~~------~~~~~~v~a~~~~r~~R~~~r  140 (188)
T c3ch4B_          80 QADPGFFCRKIVEGI-------------SQPIWLVSDTRRVSDIQWFREAYGA------VTQTVRVVALEQSRQQRGWVF  140 (188)
T ss_dssp             HHCTTTTHHHHSBTC-------------CCSEEEECCCCSHHHHHHHHHHHGG------GEEEEEEEECHHHHHHTTCCC
T ss_pred             HHCCCHHHHHHHHHH-------------HCCCEEECCCCCHHHHHHHHHHCCE------EEEEECCCCCHHHHHHHHHHC
T ss_conf             421361367899973-------------1288475442137887787631790------899705689999999876520