Phyre 2 alignment of P27111 with c1z05A_

Return to main results | Retrieve Phyre Job Id

Job Description | P27111
Confidence | 91.33% | Date | Thu Jan 5 11:43:09 GMT 2012
Rank | 188 | Aligned Residues | 36
% Identity | 11% | Template | c1z05A_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator, rok family; | PDBTitle: crystal structure of the rok family transcriptional regulator, homolog2 of e.coli mlc protein.
Resolution | 2.00 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . |  |  | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | Y | F | L | A | V | A | E | H | G | S | F | T | R | A | . | . | A | S | A | L | H | V | S | Q | P | A | L | S | Q | Q | I | R | Q | L | E | E | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | V | Y | K | L | I | D | Q | K | G | P | I | S | R | I | D | L | S | K | E | S | E | L | A | P | A | S | I | T | K | I | T | R | E | L | I | D | A
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  |  | S | B |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions