Phyre 2 alignment of P27111 with c3hugA_

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Job Description | P27111
Confidence | 50.60% | Date | Thu Jan 5 11:43:09 GMT 2012
Rank | 320 | Aligned Residues | 43
% Identity | 14% | Template | c3hugA_
PDB info | PDB header:transcription/membrane protein | Chain: A: PDB Molecule:rna polymerase sigma factor; | PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
Resolution | 2.35 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Query Sequence |  | M | L | S | R | H | I | N | Y | F | L | A | V | A | E | H | G | . | S | F | T | R | A | A | S | A | L | H | V | S | Q | P | A | L | S | Q | Q | I | R | Q | L | E | E | S | L
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Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | S | A | E | H | R | A | V | I | Q | R | S | Y | Y | R | G | W | S | T | A | Q | I | A | T | D | L | G | I | A | E | G | T | V | K | S | R | L | H | Y | A | V | R | A | L
Template Known Secondary structure |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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