Phyre 2 alignment of P27111 with c2jvlA_

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Job Description | P27111
Confidence | 62.40% | Date | Thu Jan 5 11:43:09 GMT 2012
Rank | 272 | Aligned Residues | 31
% Identity | 16% | Template | c2jvlA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:trmbf1; | PDBTitle: nmr structure of the c-terminal domain of mbf1 of trichoderma reesei
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | 40 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | F | T | R | A | A | S | A | L | H | V | S | Q | P | A | L | S | Q | Q | . | . | . | . | . | . | . | . | . | . | . | I | R | Q | L | E | E | S | L | G | V | P | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | Q | A | E | L | G | K | E | I | G | E | T | A | A | T | V | A | S | Y | E | R | G | T | A | T | P | D | Q | N | I | L | S | K | M | E | R | V | L | N | V | K | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  | T | T | T |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  | B | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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