Phyre 2 alignment of P27111 with c2bx9J_

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Job Description | P27111
Confidence | 32.28% | Date | Thu Jan 5 11:43:09 GMT 2012
Rank | 380 | Aligned Residues | 23
% Identity | 26% | Template | c2bx9J_
PDB info | PDB header:transcription regulation | Chain: J: PDB Molecule:tryptophan rna-binding attenuator protein-inhibitory | PDBTitle: crystal structure of b.subtilis anti-trap protein, an2 antagonist of trap-rna interactions
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | .
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Query Sequence |  | S | G | R | T | I | R | L | T | D | A | G | E | V | W | R | Q | Y | A | S | R | A | L | Q
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Template Sequence |  | S | G | K | G | V | I | L | T | A | Q | G | Y | T | L | L | D | F | I | Q | K | H | L | N
Template Known Secondary structure |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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