Phyre 2 alignment of P27111 with c1s7eA_

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Job Description | P27111
Confidence | 35.20% | Date | Thu Jan 5 11:43:09 GMT 2012
Rank | 364 | Aligned Residues | 37
% Identity | 24% | Template | c1s7eA_
PDB info | PDB header:transcription | Chain: A: PDB Molecule:hepatocyte nuclear factor 6; | PDBTitle: solution structure of hnf-6
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | M | L | S | R | H | I | . | N | Y | F | L | A | V | A | E | H | G | S | F | T | R | A | . | . | A | S | A | . | L | H | V | S | Q | P | A | L | S | Q | Q | I | R
Query Conservation |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | N | T | K | E | V | A | Q | R | I | T | T | E | L | K | R | Y | S | I | P | Q | A | I | F | A | Q | R | V | L | C | R | S | Q | G | T | L | S | D | L | L | R
Template Known Secondary structure |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |  |  |  |  | T | S | S | S |  | S | S |  |  |  |  |  | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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