 |
| Job Description | P77610 | | Confidence | 4.14% | Date | Thu Jan 5 12:31:02 GMT 2012 |
| Rank | 43 | Aligned Residues | 28 |
| % Identity | 14% | Template | c2j8qB_ |
| PDB info |
PDB header:nuclear protein | Chain: B: PDB Molecule:cleavage and polyadenylation specificity factor 5; |
PDBTitle: crystal structure of human cleavage and polyadenylation2 specificity factor 5 (cpsf5) in complex with a sulphate3 ion.
|
| Resolution | 2.3 Å |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | K | H | D | T | D | T | S | D | Q | H | A | A | K | R | R | W | L | N | A | H | E | E | G | Y | H | K | A |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |
|
|   |
|
|
| Template Sequence |   |
P | L | Y | E | K | D | S | S | V | A | A | R | F | Q | R | M | R | E | E | F | D | K | I | G | M | R | R | T |
| Template Known Secondary structure |   |
|
|
|
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|