BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (95 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobact... 186 2e-46 UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Kl... 91 2e-17 UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serrati... 70 2e-11 UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_... 63 3e-09 UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea... 58 1e-07 UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc... 54 1e-06 UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB... 54 2e-06 UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC... 52 5e-06 UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia... 46 5e-04 UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersini... 44 0.002 UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Provide... 43 0.003 UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus... 42 0.008 >UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobacteriaceae RepID=YBJC_ECOLI Length = 95 Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 95/95 (100%), Positives = 95/95 (100%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA Sbjct: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH Sbjct: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 >UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Klebsiella RepID=A6T6U6_KLEP7 Length = 95 Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 67/95 (70%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR LPK +L++E +GM LL +A LS++ + LP P + P ++M+F G++LM+PAA Sbjct: 1 MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 +VV+ ++A+ +APQL + P S S+REK NDA+H Sbjct: 61 IVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH 95 >UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8GCA6_SERP5 Length = 116 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR+ G LP+ VL+LE +GM+LL +A LS+ + LP + + + MIFLGV LM+PAA Sbjct: 16 MRSFGDLPRTVLVLEGLGMLLLVLAYLSIHSHVQLPGWLASQQAAVGMIFLGVALMVPAA 75 Query: 61 VVVILQVAKRLAPQLM-NRPPQYSRSEREKDNDAN 94 ++ +V + P + +PPQ R + + D N Sbjct: 76 AFLVWRVVQGFGPLMRGGQPPQNDRRKPDTPEDKN 110 >UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_YERPP Length = 104 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 9/104 (8%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++G +P+ V+I E +G++LL VA LS+++ LSLP P I+MIF+GV LM+PAA Sbjct: 1 MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMN----RPPQYSRSER-----EKDNDANH 95 V ++ +VA P L + PQ + E+ +K NH Sbjct: 61 VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH 104 >UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7N2_9ENTR Length = 83 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 51/78 (65%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M + +LPK VL+LE +G++ + AL V+D ++ P + + L+ F+G+ LMLPAA Sbjct: 1 MSNLARLPKPVLLLEAVGVIAVIGALALVNDWIAAPAAIGQKTLATLLFFVGIALMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNR 78 +++ + AK +APQL N+ Sbjct: 61 WLMMWRTAKAMAPQLFNQ 78 >UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc of escherichia coli n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BQZ6_PHOAA Length = 104 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 52/91 (57%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE IG+ L +A L+++D + L + PE I+MIF+G+ ++PAA Sbjct: 10 MSSLADMPKQVILLEVIGIGWLLLAYLTINDVVILTDLLMTPEAHIVMIFVGIGCLIPAA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 V +I + L+ ++ + + DN Sbjct: 70 VNIIWRAVYGLSFLGIDHKKESKNKSKGIDN 100 >UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB8_9ENTR Length = 120 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 2/91 (2%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ +PK VL+LE IG++LL LL+ + ++LPE + I MI +GV ++PA Sbjct: 15 MRSLADMPKPVLVLEGIGIILLMTVLLATNGYITLPEILASSSAIITMILVGVGCLVPAM 74 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 + +I + L + + + S+RE+ N Sbjct: 75 INIIWRAVHGLT--FLGMDNKSTGSDRERKN 103 >UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N6G8_PHOLL Length = 100 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 52/91 (57%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE +G++ L +A L+++D + L + PE ++MIF+G+ ++PAA Sbjct: 8 MSSLADMPKQVILLEIVGILGLLLAYLTINDIVILTDLLMTPEAHVVMIFIGIGCLVPAA 67 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 V +I + L+ ++ + DN Sbjct: 68 VNIIWRAVYGLSFLGVDHKKESKNKVEGSDN 98 >UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VC48_ERWT9 Length = 84 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRA +LP+ +L++E +G++LL V+ ++ D L P + ++F ++L+LP Sbjct: 1 MRAFSQLPRPLLLMEILGIVLLVVSPFALRDMLPF-SPLNGKPTATALLFAAIVLILPVP 59 Query: 61 VVVILQVAKRLAPQLMN 77 VV+I + AK LAP+L + Sbjct: 60 VVMIWRSAKLLAPKLFH 76 >UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UF22_YERRU Length = 91 Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 33 LSLPEPFSRPEVQILMIFLGVLLMLPAAVVVILQVAKRLAPQL-MNRPPQYSRSEREK 89 L LP S P V I+MIF+G+ LM+PAA ++ +VA+ P L MN + ++ +K Sbjct: 22 LILPAGLSEPTVAIMMIFIGIGLMIPAAACIVWRVAQGFGPLLGMNGIDKKEPTDADK 79 >UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q420_PROST Length = 110 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 48/72 (66%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ LPK +LILE +G++LL V LL+++ L+LPEP + V + ++ +G+ ++PA Sbjct: 9 MRSLSDLPKPILILEAVGILLLIVVLLAMNGYLTLPEPLMQKNVLVAIVMVGIGCLIPAT 68 Query: 61 VVVILQVAKRLA 72 + ++ + L+ Sbjct: 69 INIVWRAIHGLS 80 >UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B1N9_9ENTR Length = 101 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 57/92 (61%), Gaps = 2/92 (2%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M+++ +PK ++I+E IG++LL VA L ++ ++ P+ Q+ ++ LGV+ M+P A Sbjct: 10 MKSLSDMPKPIIIIEIIGIILLVVAYLYINQYMTSPQWLGTYTGQLTLVVLGVICMIPPA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDND 92 + ++ + RL + Q ++S+++K+N+ Sbjct: 70 IHIVWRAIYRLT--FLGIDHQSTKSKQKKENN 99 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc... 113 2e-24 UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serrati... 113 3e-24 UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC... 108 6e-23 UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB... 106 3e-22 UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Kl... 105 3e-22 UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobact... 103 1e-21 UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_... 93 2e-18 UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea... 85 9e-16 UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia... 71 1e-11 UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersini... 68 9e-11 Sequences not found previously or not previously below threshold: UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Provide... 77 2e-13 UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus... 74 1e-12 UniRef50_B4ET15 Putative membrane protein n=2 Tax=Proteus mirabi... 65 5e-10 UniRef50_D2U0H2 Putative uncharacterized protein n=1 Tax=Arsenop... 58 9e-08 UniRef50_D2TDW6 Uncharacterized protein ybjC n=2 Tax=Erwinia pyr... 45 0.001 >UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc of escherichia coli n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BQZ6_PHOAA Length = 104 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 52/94 (55%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE IG+ L +A L+++D + L + PE I+MIF+G+ ++PAA Sbjct: 10 MSSLADMPKQVILLEVIGIGWLLLAYLTINDVVILTDLLMTPEAHIVMIFVGIGCLIPAA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDAN 94 V +I + L+ ++ + + DN Sbjct: 70 VNIIWRAVYGLSFLGIDHKKESKNKSKGIDNGKE 103 >UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8GCA6_SERP5 Length = 116 Score = 113 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR+ G LP+ VL+LE +GM+LL +A LS+ + LP + + + MIFLGV LM+PAA Sbjct: 16 MRSFGDLPRTVLVLEGLGMLLLVLAYLSIHSHVQLPGWLASQQAAVGMIFLGVALMVPAA 75 Query: 61 VVVILQVAKRLAPQLM-NRPPQYSRSEREKDNDAN 94 ++ +V + P + +PPQ R + + D N Sbjct: 76 AFLVWRVVQGFGPLMRGGQPPQNDRRKPDTPEDKN 110 >UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N6G8_PHOLL Length = 100 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 52/93 (55%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE +G++ L +A L+++D + L + PE ++MIF+G+ ++PAA Sbjct: 8 MSSLADMPKQVILLEIVGILGLLLAYLTINDIVILTDLLMTPEAHVVMIFIGIGCLVPAA 67 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDA 93 V +I + L+ ++ + DN Sbjct: 68 VNIIWRAVYGLSFLGVDHKKESKNKVEGSDNGK 100 >UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB8_9ENTR Length = 120 Score = 106 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 2/91 (2%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ +PK VL+LE IG++LL LL+ + ++LPE + I MI +GV ++PA Sbjct: 15 MRSLADMPKPVLVLEGIGIILLMTVLLATNGYITLPEILASSSAIITMILVGVGCLVPAM 74 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 + +I + L + + S+RE+ N Sbjct: 75 INIIWRAVHGLTFL--GMDNKSTGSDRERKN 103 >UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Klebsiella RepID=A6T6U6_KLEP7 Length = 95 Score = 105 bits (263), Expect = 3e-22, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 67/95 (70%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR LPK +L++E +GM LL +A LS++ + LP P + P ++M+F G++LM+PAA Sbjct: 1 MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 +VV+ ++A+ +APQL + P S S+REK NDA+H Sbjct: 61 IVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH 95 >UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobacteriaceae RepID=YBJC_ECOLI Length = 95 Score = 103 bits (258), Expect = 1e-21, Method: Composition-based stats. Identities = 95/95 (100%), Positives = 95/95 (100%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA Sbjct: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH Sbjct: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 >UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_YERPP Length = 104 Score = 93.1 bits (230), Expect = 2e-18, Method: Composition-based stats. Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 9/104 (8%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++G +P+ V+I E +G++LL VA LS+++ LSLP P I+MIF+GV LM+PAA Sbjct: 1 MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMN----RPPQYSRSER-----EKDNDANH 95 V ++ +VA P L + PQ + E+ +K NH Sbjct: 61 VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH 104 >UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7N2_9ENTR Length = 83 Score = 84.7 bits (208), Expect = 9e-16, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 52/83 (62%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M + +LPK VL+LE +G++ + AL V+D ++ P + + L+ F+G+ LMLPAA Sbjct: 1 MSNLARLPKPVLLLEAVGVIAVIGALALVNDWIAAPAAIGQKTLATLLFFVGIALMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYS 83 +++ + AK +APQL N+ + Sbjct: 61 WLMMWRTAKAMAPQLFNQHDKKK 83 >UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q420_PROST Length = 110 Score = 76.6 bits (187), Expect = 2e-13, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 50/84 (59%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ LPK +LILE +G++LL V LL+++ L+LPEP + V + ++ +G+ ++PA Sbjct: 9 MRSLSDLPKPILILEAVGILLLIVVLLAMNGYLTLPEPLMQKNVLVAIVMVGIGCLIPAT 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSR 84 + ++ + L+ ++ Sbjct: 69 INIVWRAIHGLSFLGIDNQNSSRP 92 >UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B1N9_9ENTR Length = 101 Score = 74.3 bits (181), Expect = 1e-12, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 54/91 (59%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M+++ +PK ++I+E IG++LL VA L ++ ++ P+ Q+ ++ LGV+ M+P A Sbjct: 10 MKSLSDMPKPIIIIEIIGIILLVVAYLYINQYMTSPQWLGTYTGQLTLVVLGVICMIPPA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 + ++ + RL ++ S+ ++E +N Sbjct: 70 IHIVWRAIYRLTFLGIDHQSTKSKQKKENNN 100 >UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VC48_ERWT9 Length = 84 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRA +LP+ +L++E +G++LL V+ ++ D L P + ++F ++L+LP Sbjct: 1 MRAFSQLPRPLLLMEILGIVLLVVSPFALRDMLPF-SPLNGKPTATALLFAAIVLILPVP 59 Query: 61 VVVILQVAKRLAPQLMN 77 VV+I + AK LAP+L + Sbjct: 60 VVMIWRSAKLLAPKLFH 76 >UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UF22_YERRU Length = 91 Score = 68.1 bits (165), Expect = 9e-11, Method: Composition-based stats. Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%) Query: 30 SDSLSLPEPFSRPEVQILMIFLGVLLMLPAAVVVILQVAKRLAPQL-MNRPPQYSRSERE 88 L LP S P V I+MIF+G+ LM+PAA ++ +VA+ P L MN + ++ + Sbjct: 19 HQYLILPAGLSEPTVAIMMIFIGIGLMIPAAACIVWRVAQGFGPLLGMNGIDKKEPTDAD 78 Query: 89 KD 90 K Sbjct: 79 KK 80 >UniRef50_B4ET15 Putative membrane protein n=2 Tax=Proteus mirabilis RepID=B4ET15_PROMH Length = 100 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M+ + +PK ++I+E IG++LL +A L ++ ++ PE + Q+ ++ LGVL M+P A Sbjct: 9 MKTLSDMPKPIIIIELIGIVLLVIAYLYINQYMTSPEWLTTYTGQLTLVVLGVLCMIPPA 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDA 93 + ++ + RL ++ +++ N+ Sbjct: 69 IHIVWRAIYRLTFLGID-TKATENKKKKPHNEK 100 >UniRef50_D2U0H2 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U0H2_9ENTR Length = 109 Score = 58.1 bits (139), Expect = 9e-08, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 50/89 (56%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR+ G +PK V+ILE IG++LL + L +++ + + F + V + MI L V M+PA Sbjct: 9 MRSFGDMPKIVIILEVIGILLLLLVYLVINNYIEIAALFMKKGVLLAMIMLAVGCMIPAI 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREK 89 + ++ + +L+ +++ S+ K Sbjct: 69 INIVWRALPKLSFFGIDQHKNSSQHNPRK 97 >UniRef50_D2TDW6 Uncharacterized protein ybjC n=2 Tax=Erwinia pyrifoliae RepID=D2TDW6_ERWPY Length = 80 Score = 44.6 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRA +L + VL+LE +G+ LL A L++ + LP P S PAA Sbjct: 3 MRAFSQLSRPVLLLEVLGIALLVAAPLALHE--RLPWPLSGK---------------PAA 45 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 V I + AK +AP L + + + +D +H Sbjct: 46 TVKIWRCAKIIAPALFSARSLRDKPKPGYSHDPDH 80 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc... 115 4e-25 UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serrati... 112 4e-24 UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC... 110 2e-23 UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB... 109 2e-23 UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Kl... 102 5e-21 UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobact... 100 2e-20 UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus... 99 4e-20 UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_... 92 7e-18 UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Provide... 90 2e-17 UniRef50_B4ET15 Putative membrane protein n=2 Tax=Proteus mirabi... 90 3e-17 UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea... 84 1e-15 UniRef50_D2U0H2 Putative uncharacterized protein n=1 Tax=Arsenop... 78 1e-13 UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia... 71 1e-11 UniRef50_D2TDW6 Uncharacterized protein ybjC n=2 Tax=Erwinia pyr... 70 2e-11 UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersini... 65 5e-10 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_C7BQZ6 Similarities with putative membrane protein ybjc of escherichia coli n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BQZ6_PHOAA Length = 104 Score = 115 bits (288), Expect = 4e-25, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 52/94 (55%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE IG+ L +A L+++D + L + PE I+MIF+G+ ++PAA Sbjct: 10 MSSLADMPKQVILLEVIGIGWLLLAYLTINDVVILTDLLMTPEAHIVMIFVGIGCLIPAA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDAN 94 V +I + L+ ++ + + DN Sbjct: 70 VNIIWRAVYGLSFLGIDHKKESKNKSKGIDNGKE 103 >UniRef50_A8GCA6 Putative uncharacterized protein n=2 Tax=Serratia RepID=A8GCA6_SERP5 Length = 116 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR+ G LP+ VL+LE +GM+LL +A LS+ + LP + + + MIFLGV LM+PAA Sbjct: 16 MRSFGDLPRTVLVLEGLGMLLLVLAYLSIHSHVQLPGWLASQQAAVGMIFLGVALMVPAA 75 Query: 61 VVVILQVAKRLAPQLM-NRPPQYSRSEREKDNDAN 94 ++ +V + P + +PPQ R + + D N Sbjct: 76 AFLVWRVVQGFGPLMRGGQPPQNDRRKPDTPEDKN 110 >UniRef50_Q7N6G8 Similarities with putative membrane protein YbjC of Escherichia coli n=1 Tax=Photorhabdus luminescens subsp. laumondii RepID=Q7N6G8_PHOLL Length = 100 Score = 110 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 52/93 (55%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M ++ +PK V++LE +G++ L +A L+++D + L + PE ++MIF+G+ ++PAA Sbjct: 8 MSSLADMPKQVILLEIVGILGLLLAYLTINDIVILTDLLMTPEAHVVMIFIGIGCLVPAA 67 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDA 93 V +I + L+ ++ + DN Sbjct: 68 VNIIWRAVYGLSFLGVDHKKESKNKVEGSDNGK 100 >UniRef50_D1NXB8 Membrane protein n=3 Tax=Providencia RepID=D1NXB8_9ENTR Length = 120 Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats. Identities = 30/94 (31%), Positives = 50/94 (53%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ +PK VL+LE IG++LL LL+ + ++LPE + I MI +GV ++PA Sbjct: 15 MRSLADMPKPVLVLEGIGIILLMTVLLATNGYITLPEILASSSAIITMILVGVGCLVPAM 74 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDAN 94 + +I + L M+ S ER+ + Sbjct: 75 INIIWRAVHGLTFLGMDNKSTGSDRERKNHQKKS 108 >UniRef50_A6T6U6 Putative uncharacterized protein ybjC n=5 Tax=Klebsiella RepID=A6T6U6_KLEP7 Length = 95 Score = 102 bits (253), Expect = 5e-21, Method: Composition-based stats. Identities = 43/95 (45%), Positives = 67/95 (70%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR LPK +L++E +GM LL +A LS++ + LP P + P ++M+F G++LM+PAA Sbjct: 1 MRKFAPLPKSILLVEILGMGLLTLAWLSLNQYVQLPAPIASPTAALVMLFAGIVLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 +VV+ ++A+ +APQL + P S S+REK NDA+H Sbjct: 61 IVVMWRMAQIVAPQLTHSPKPESLSDREKRNDADH 95 >UniRef50_P46119 Uncharacterized protein ybjC n=93 Tax=Enterobacteriaceae RepID=YBJC_ECOLI Length = 95 Score = 100 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 95/95 (100%), Positives = 95/95 (100%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA Sbjct: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH Sbjct: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 >UniRef50_C0B1N9 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198 RepID=C0B1N9_9ENTR Length = 101 Score = 99.3 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 25/91 (27%), Positives = 54/91 (59%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M+++ +PK ++I+E IG++LL VA L ++ ++ P+ Q+ ++ LGV+ M+P A Sbjct: 10 MKSLSDMPKPIIIIEIIGIILLVVAYLYINQYMTSPQWLGTYTGQLTLVVLGVICMIPPA 69 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDN 91 + ++ + RL ++ S+ ++E +N Sbjct: 70 IHIVWRAIYRLTFLGIDHQSTKSKQKKENNN 100 >UniRef50_A4TN81 Membrane protein n=30 Tax=Yersinia RepID=A4TN81_YERPP Length = 104 Score = 91.6 bits (226), Expect = 7e-18, Method: Composition-based stats. Identities = 38/104 (36%), Positives = 59/104 (56%), Gaps = 9/104 (8%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++G +P+ V+I E +G++LL VA LS+++ LSLP P I+MIF+GV LM+PAA Sbjct: 1 MRSLGNMPRIVIISEVLGLLLLVVAYLSINNYLSLPGEMGTPTAAIMMIFVGVGLMIPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSER---------EKDNDANH 95 V ++ +VA P L + + + +K NH Sbjct: 61 VCIVWRVASGFGPLLGSADRISTPQKASEEKLAAKSKKSGQDNH 104 >UniRef50_B2Q420 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC 25827 RepID=B2Q420_PROST Length = 110 Score = 90.5 bits (223), Expect = 2e-17, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 50/84 (59%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR++ LPK +LILE +G++LL V LL+++ L+LPEP + V + ++ +G+ ++PA Sbjct: 9 MRSLSDLPKPILILEAVGILLLIVVLLAMNGYLTLPEPLMQKNVLVAIVMVGIGCLIPAT 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSR 84 + ++ + L+ ++ Sbjct: 69 INIVWRAIHGLSFLGIDNQNSSRP 92 >UniRef50_B4ET15 Putative membrane protein n=2 Tax=Proteus mirabilis RepID=B4ET15_PROMH Length = 100 Score = 89.7 bits (221), Expect = 3e-17, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 1/93 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M+ + +PK ++I+E IG++LL +A L ++ ++ PE + Q+ ++ LGVL M+P A Sbjct: 9 MKTLSDMPKPIIIIELIGIVLLVIAYLYINQYMTSPEWLTTYTGQLTLVVLGVLCMIPPA 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDA 93 + ++ + RL ++ +++ N+ Sbjct: 69 IHIVWRAIYRLTFLGID-TKATENKKKKPHNEK 100 >UniRef50_C8Q7N2 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q7N2_9ENTR Length = 83 Score = 83.9 bits (206), Expect = 1e-15, Method: Composition-based stats. Identities = 30/83 (36%), Positives = 52/83 (62%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 M + +LPK VL+LE +G++ + AL V+D ++ P + + L+ F+G+ LMLPAA Sbjct: 1 MSNLARLPKPVLLLEAVGVIAVIGALALVNDWIAAPAAIGQKTLATLLFFVGIALMLPAA 60 Query: 61 VVVILQVAKRLAPQLMNRPPQYS 83 +++ + AK +APQL N+ + Sbjct: 61 WLMMWRTAKAMAPQLFNQHDKKK 83 >UniRef50_D2U0H2 Putative uncharacterized protein n=1 Tax=Arsenophonus nasoniae RepID=D2U0H2_9ENTR Length = 109 Score = 77.8 bits (190), Expect = 1e-13, Method: Composition-based stats. Identities = 26/89 (29%), Positives = 50/89 (56%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MR+ G +PK V+ILE IG++LL + L +++ + + F + V + MI L V M+PA Sbjct: 9 MRSFGDMPKIVIILEVIGILLLLLVYLVINNYIEIAALFMKKGVLLAMIMLAVGCMIPAI 68 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREK 89 + ++ + +L+ +++ S+ K Sbjct: 69 INIVWRALPKLSFFGIDQHKNSSQHNPRK 97 >UniRef50_B2VC48 Putative uncharacterized protein n=1 Tax=Erwinia tasmaniensis RepID=B2VC48_ERWT9 Length = 84 Score = 71.2 bits (173), Expect = 1e-11, Method: Composition-based stats. Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 1/85 (1%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRA +LP+ +L++E +G++LL V+ ++ D L P + ++F ++L+LP Sbjct: 1 MRAFSQLPRPLLLMEILGIVLLVVSPFALRDMLPF-SPLNGKPTATALLFAAIVLILPVP 59 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRS 85 VV+I + AK LAP+L + ++ Sbjct: 60 VVMIWRSAKLLAPKLFHVLSVRNKR 84 >UniRef50_D2TDW6 Uncharacterized protein ybjC n=2 Tax=Erwinia pyrifoliae RepID=D2TDW6_ERWPY Length = 80 Score = 70.1 bits (170), Expect = 2e-11, Method: Composition-based stats. Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 17/95 (17%) Query: 1 MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEVQILMIFLGVLLMLPAA 60 MRA +L + VL+LE +G+ LL A L++ + LP P S PAA Sbjct: 3 MRAFSQLSRPVLLLEVLGIALLVAAPLALHE--RLPWPLSGK---------------PAA 45 Query: 61 VVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH 95 V I + AK +AP L + + + +D +H Sbjct: 46 TVKIWRCAKIIAPALFSARSLRDKPKPGYSHDPDH 80 >UniRef50_C4UF22 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UF22_YERRU Length = 91 Score = 65.4 bits (158), Expect = 5e-10, Method: Composition-based stats. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Query: 30 SDSLSLPEPFSRPEVQILMIFLGVLLMLPAAVVVILQVAKRLAP-QLMNRPPQYSRSERE 88 L LP S P V I+MIF+G+ LM+PAA ++ +VA+ P MN + ++ + Sbjct: 19 HQYLILPAGLSEPTVAIMMIFIGIGLMIPAAACIVWRVAQGFGPLLGMNGIDKKEPTDAD 78 Query: 89 KD 90 K Sbjct: 79 KK 80 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.315 0.136 0.360 Lambda K H 0.267 0.0419 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 488,246,285 Number of Sequences: 3077464 Number of extensions: 14743838 Number of successful extensions: 78311 Number of sequences better than 1.0e-01: 15 Number of HSP's better than 0.1 without gapping: 43 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 78257 Number of HSP's gapped (non-prelim): 44 length of query: 95 length of database: 1,040,396,356 effective HSP length: 64 effective length of query: 31 effective length of database: 843,438,660 effective search space: 26146598460 effective search space used: 26146598460 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 87 (38.1 bits)