Phyre 2 alignment of P14407 with d1muja2

Return to main results | Retrieve Phyre Job Id

Job Description | P14407
Confidence | 18.38% | Date | Thu Jan 5 11:34:03 GMT 2012
Rank | 34 | Aligned Residues | 26
% Identity | 35% | Template | d1muja2
SCOP info | MHC antigen-recognition domain | MHC antigen-recognition domain | MHC antigen-recognition domain
Resolution | 2.15

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | F | I | Y | Q | A | P | F | P | M | G | K | D | N | T | E | Y | Y | L | L | T | S | D | Y | V | S | V | A | D | F | D | G | E | T | I | L | K | V | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | I | S | V | Y | Q | S | P | G | D | I | G | . | . | . | . | Q | Y | T | F | . | . | . | . | . | . | . | . | . | E | F | D | G | D | E | L | F | Y | V | D
Template Known Secondary structure |  |  |  |  |  |  | T | T | T | T |  |  | . | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 10 | . | . | . | . | . | . | . | . | . | 20 |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  | . | . | . | . | . | 30 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions