Phyre 2 alignment of P14407 with d1e32a1

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Job Description | P14407
Confidence | 10.78% | Date | Thu Jan 5 11:34:03 GMT 2012
Rank | 90 | Aligned Residues | 20
% Identity | 10% | Template | d1e32a1
SCOP info | Double psi beta-barrel | ADC-like | Cdc48 N-terminal domain-like
Resolution | 2.9

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 367 | . | . | 370 | . | . | . | . | . | . | . | . | . |  |  | 380 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Query Sequence |  | M | K | E | I | L | A | Q | L | S | Q | Y | P | V | . | . | S | T | R | L | S | L | T | G | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  | . | . |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | L | S | Q | . | . | P | K | M | D | E | L | Q | L | F | R | G | D | T | V | L | L | K | G | K
Template Known Secondary structure |  |  |  |  | . | . |  |  |  |  |  | T | T |  |  | T | T |  |  |  |  |  |  |  | S
Template Predicted Secondary structure |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 41 | . | . |  |  | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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