Phyre 2 alignment of P14407 with c2e0iD_

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Job Description | P14407
Confidence | 28.28% | Date | Thu Jan 5 11:34:03 GMT 2012
Rank | 15 | Aligned Residues | 50
% Identity | 12% | Template | c2e0iD_
PDB info | PDB header:lyase | Chain: D: PDB Molecule:432aa long hypothetical deoxyribodipyrimidine photolyase; | PDBTitle: crystal structure of archaeal photolyase from sulfolobus tokodaii with2 two fad molecules: implication of a novel light-harvesting cofactor
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . |  |  |  |  | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | R | E | G | I | W | I | E | K | L | E | H | N | . | . | . | . | P | G | Q | Y | I | P | Q | E | L | R | Q | A | G | E | G | E | A | V | K | . | V | D | L | N | R | P | M | K | E | I | L | A | Q | L | S | Q | Y | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | P | E | A | K | F | I | K | E | W | V | E | E | L | K | D | V | P | P | S | I | I | H | S | I | Y | K | T | K | V | P | G | Y | P | S | P | I | V | N | W | L | E | R | V | N | Y | V | K | S | E | Y | K | N | V | K
Template Known Secondary structure |  |  | T | T |  |  |  |  |  |  |  |  | G | G | G | G | S | S |  |  |  |  |  | T | T | T | T | T | S |  |  | T | T | S |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 375 | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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