Phyre 2 Results for P14407

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Email | l.a.kelley@imperial.ac.uk
Description | P14407
Date | Thu Jan 5 11:34:03 GMT 2012
Unique Job ID | 8ddc337b235d61fb

Summary |

Top model
Image coloured by rainbow N → C terminus
| Close Jmol

Model (left) based on template d2isba1
Top template information
Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like
Confidence and coverage
Confidence: | 100.0% | Coverage: | 31%
172 residues ( 31% of your sequence) have been modelled with 100.0% confidence by the single highest scoring template.
You may wish to submit your sequence to Phyrealarm. This will automatically scan your sequence every week for new potential templates as they appear in the Phyre2 library.
3D viewing
Interactive 3D view in Jmol

Sequence analysis |

Secondary structure and disorder prediction |

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Sequence |  | M | S | N | K | P | F | I | Y | Q | A | P | F | P | M | G | K | D | N | T | E | Y | Y | L | L | T | S | D | Y | V | S | V | A | D | F | D | G | E | T | I | L | K | V | E | P | E | A | L | T | L | L | A | Q | Q | A | F | H | D | A | S | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120
Sequence |  | M | L | R | P | A | H | Q | K | Q | V | A | A | I | L | H | D | P | E | A | S | E | N | D | K | Y | V | A | L | Q | F | L | R | N | S | E | I | A | A | K | G | V | L | P | T | C | Q | D | T | G | T | A | I | I | V | G | K | K | G | Q | R
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180
Sequence |  | V | W | T | G | G | G | D | E | E | T | L | S | K | G | V | Y | N | T | Y | I | E | D | N | L | R | Y | S | Q | N | A | A | L | D | M | Y | K | E | V | N | T | G | T | N | L | P | A | Q | I | D | L | Y | A | V | D | G | D | E | Y | K | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240
Sequence |  | L | C | V | A | K | G | G | G | S | A | N | K | T | Y | L | Y | Q | E | T | K | A | L | L | T | P | G | K | L | K | N | F | L | V | E | K | M | R | T | L | G | T | A | A | C | P | P | Y | H | I | A | F | V | I | G | G | T | S | A | E | T
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  | ? |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300
Sequence |  | N | L | K | T | V | K | L | A | S | A | H | Y | Y | D | E | L | P | T | E | G | N | E | H | G | Q | A | F | R | D | V | Q | L | E | Q | E | L | L | E | E | A | Q | K | L | G | L | G | A | Q | F | G | G | K | Y | F | A | H | D | I | R | V
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360
Sequence |  | I | R | L | P | R | H | G | A | S | C | P | V | G | M | G | V | S | C | S | A | D | R | N | I | K | A | K | I | N | R | E | G | I | W | I | E | K | L | E | H | N | P | G | Q | Y | I | P | Q | E | L | R | Q | A | G | E | G | E | A | V | K
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? | ? | ? | ? | ? | ? | ? |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420
Sequence |  | V | D | L | N | R | P | M | K | E | I | L | A | Q | L | S | Q | Y | P | V | S | T | R | L | S | L | T | G | T | I | I | V | G | R | D | I | A | H | A | K | L | K | E | L | I | D | A | G | K | E | L | P | Q | Y | I | K | D | H | P | I | Y
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480
Sequence |  | Y | A | G | P | A | K | T | P | A | G | Y | P | S | G | S | L | G | P | T | T | A | G | R | M | D | S | Y | V | D | L | L | Q | S | H | G | G | S | M | I | M | L | A | K | G | N | R | S | Q | Q | V | T | D | A | C | H | K | H | G | G | F
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  | ? | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ? |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540
Sequence |  | Y | L | G | S | I | G | G | P | A | A | V | L | A | Q | Q | S | I | K | H | L | E | C | V | A | Y | P | E | L | G | M | E | A | I | W | K | I | E | V | E | D | F | P | A | F | I | L | V | D | D | K | G | N | D | F | F | Q | Q | I | V | N
Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Disorder confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | . | . | . | . | . | . | . | .
Sequence |  | K | Q | C | A | N | C | T | K
Secondary structure |  |  |  |  |  |  |  |  |
SS confidence |  |  |  |  |  |  |  |  |
Disorder |  |  |  |  |  |  |  | ? | ?
Disorder confidence |  |  |  |  |  |  |  |  |

Confidence Key
High(9) |  |  |  |  |  |  |  |  |  |  | Low (0)

? | Disordered
| Alpha helix
| Beta strand

Domain analysis |

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank | Aligned region
--- | ---
1 |
| d2isba1 |

### PDB 2isb chain A domain 1

Region: 361 - 536
Aligned: 172
Modelled: 176
Confidence: 100.0%
Identity: 31%
Fold: The "swivelling" beta/beta/alpha domain
Superfamily: FumA C-terminal domain-like
Family: FumA C-terminal domain-like

Phyre2
2 |
| d1ed7a_ |

### PDB 1ed7 chain A

Region: 377 - 393
Aligned: 17
Modelled: 17
Confidence: 58.8%
Identity: 12%
Fold: WW domain-like
Superfamily: Carbohydrate binding domain
Family: Carbohydrate binding domain

Phyre2
3 |
| c1k98A_ |

### PDB 1k98 chain A

Region: 339 - 419
Aligned: 80
Modelled: 81
Confidence: 53.2%
Identity: 21%
PDB header:transferase
Chain: A: PDB Molecule:methionine synthase;
PDBTitle: adomet complex of meth c-terminal fragment

Phyre2
4 |
| c3fpnA_ |

### PDB 3fpn chain A

Region: 364 - 419
Aligned: 56
Modelled: 56
Confidence: 51.0%
Identity: 21%
PDB header:dna binding protein
Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction
PDBTitle: crystal structure of uvra-uvrb interaction domains

Phyre2
5 |
| c2xmoB_ |

### PDB 2xmo chain B

Region: 367 - 406
Aligned: 39
Modelled: 40
Confidence: 38.2%
Identity: 18%
PDB header:hydrolase
Chain: B: PDB Molecule:lmo2642 protein;
PDBTitle: the crystal structure of lmo2642

Phyre2
6 |
| d1ei5a2 |

### PDB 1ei5 chain A domain 2

Region: 312 - 327
Aligned: 16
Modelled: 16
Confidence: 37.1%
Identity: 25%
Fold: Streptavidin-like
Superfamily: D-aminopeptidase, middle and C-terminal domains
Family: D-aminopeptidase, middle and C-terminal domains

Phyre2
7 |
| c3l07B_ |

### PDB 3l07 chain B

Region: 193 - 283
Aligned: 86
Modelled: 91
Confidence: 36.5%
Identity: 17%
PDB header:oxidoreductase,hydrolase
Chain: B: PDB Molecule:bifunctional protein fold;
PDBTitle: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate2 cyclohydrolase, putative bifunctional protein fold from francisella3 tularensis.

Phyre2
8 |
| d3bula2 |

### PDB 3bul chain A domain 2

Region: 359 - 419
Aligned: 60
Modelled: 61
Confidence: 36.4%
Identity: 25%
Fold: Flavodoxin-like
Superfamily: Cobalamin (vitamin B12)-binding domain
Family: Cobalamin (vitamin B12)-binding domain

Phyre2
9 |
| c3p2oA_ |

### PDB 3p2o chain A

Region: 206 - 283
Aligned: 73
Modelled: 78
Confidence: 35.8%
Identity: 18%
PDB header:oxidoreductase, hydrolase
Chain: A: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni

Phyre2
10 |
| d12asa_ |

### PDB 12as chain A

Region: 465 - 507
Aligned: 40
Modelled: 43
Confidence: 34.3%
Identity: 18%
Fold: Class II aaRS and biotin synthetases
Superfamily: Class II aaRS and biotin synthetases
Family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain

Phyre2
11 |
| c3p2oB_ |

### PDB 3p2o chain B

Region: 206 - 283
Aligned: 73
Modelled: 78
Confidence: 32.4%
Identity: 18%
PDB header:oxidoreductase, hydrolase
Chain: B: PDB Molecule:bifunctional protein fold;
PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni

Phyre2
12 |
| c2zoeA_ |

### PDB 2zoe chain A

Region: 17 - 38
Aligned: 22
Modelled: 22
Confidence: 31.2%
Identity: 23%
PDB header:toxin
Chain: A: PDB Molecule:hemagglutinin components ha3;
PDBTitle: ha3 subcomponent of clostridium botulinum type c progenitor2 toxin, complex with n-acetylneuramic acid

Phyre2
13 |
| c2d49A_ |

### PDB 2d49 chain A

Region: 377 - 393
Aligned: 17
Modelled: 17
Confidence: 28.5%
Identity: 18%
PDB header:hydrolase
Chain: A: PDB Molecule:chitinase c;
PDBTitle: solution structure of the chitin-binding domain of2 streptomyces griseus chitinase c

Phyre2
14 |
| c2c2xB_ |

### PDB 2c2x chain B

Region: 206 - 283
Aligned: 73
Modelled: 78
Confidence: 28.4%
Identity: 14%
PDB header:oxidoreductase
Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase-
PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis

Phyre2
15 |
| c2e0iD_ |

### PDB 2e0i chain D

Region: 329 - 378
Aligned: 50
Modelled: 50
Confidence: 28.3%
Identity: 12%
PDB header:lyase
Chain: D: PDB Molecule:432aa long hypothetical deoxyribodipyrimidine photolyase;
PDBTitle: crystal structure of archaeal photolyase from sulfolobus tokodaii with2 two fad molecules: implication of a novel light-harvesting cofactor

Phyre2
16 |
| d1a4ia2 |

### PDB 1a4i chain A domain 2

Region: 206 - 284
Aligned: 74
Modelled: 79
Confidence: 26.5%
Identity: 16%
Fold: Aminoacid dehydrogenase-like, N-terminal domain
Superfamily: Aminoacid dehydrogenase-like, N-terminal domain
Family: Tetrahydrofolate dehydrogenase/cyclohydrolase

Phyre2
17 |
| d1aiwa_ |

### PDB 1aiw chain A

Region: 380 - 393
Aligned: 14
Modelled: 14
Confidence: 25.7%
Identity: 7%
Fold: WW domain-like
Superfamily: Carbohydrate binding domain
Family: Carbohydrate binding domain

Phyre2
18 |
| d2piea1 |

### PDB 2pie chain A domain 1

Region: 320 - 385
Aligned: 48
Modelled: 66
Confidence: 25.4%
Identity: 21%
Fold: SMAD/FHA domain
Superfamily: SMAD/FHA domain
Family: FHA domain

Phyre2
19 |
| d1vkza2 |

### PDB 1vkz chain A domain 2

Region: 457 - 489
Aligned: 33
Modelled: 33
Confidence: 24.2%
Identity: 21%
Fold: PreATP-grasp domain
Superfamily: PreATP-grasp domain
Family: BC N-terminal domain-like

Phyre2
20 |
| d1yqea1 |

### PDB 1yqe chain A domain 1

Region: 107 - 143
Aligned: 37
Modelled: 37
Confidence: 24.1%
Identity: 8%
Fold: Phosphorylase/hydrolase-like
Superfamily: AF0625-like
Family: AF0625-like

Phyre2
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Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | d2isba1 |
|  | 100.0 | 31 | Fold:The "swivelling" beta/beta/alpha domain Superfamily:FumA C-terminal domain-like Family:FumA C-terminal domain-like
2 | d1ed7a_ |
|  | 58.8 | 12 | Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain
3 | c1k98A_ |
|  | 53.2 | 21 | PDB header:transferase Chain: A: PDB Molecule:methionine synthase; PDBTitle: adomet complex of meth c-terminal fragment
4 | c3fpnA_ |
|  | 51.0 | 21 | PDB header:dna binding protein Chain: A: PDB Molecule:geobacillus stearothermophilus uvra interaction PDBTitle: crystal structure of uvra-uvrb interaction domains
5 | c2xmoB_ |
|  | 38.2 | 18 | PDB header:hydrolase Chain: B: PDB Molecule:lmo2642 protein; PDBTitle: the crystal structure of lmo2642
6 | d1ei5a2 |
|  | 37.1 | 25 | Fold:Streptavidin-like Superfamily:D-aminopeptidase, middle and C-terminal domains Family:D-aminopeptidase, middle and C-terminal domains
7 | c3l07B_ |
|  | 36.5 | 17 | PDB header:oxidoreductase,hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate2 cyclohydrolase, putative bifunctional protein fold from francisella3 tularensis.
8 | d3bula2 |
|  | 36.4 | 25 | Fold:Flavodoxin-like Superfamily:Cobalamin (vitamin B12)-binding domain Family:Cobalamin (vitamin B12)-binding domain
9 | c3p2oA_ |
|  | 35.8 | 18 | PDB header:oxidoreductase, hydrolase Chain: A: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
10 | d12asa_ |
|  | 34.3 | 18 | Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
11 | c3p2oB_ |
|  | 32.4 | 18 | PDB header:oxidoreductase, hydrolase Chain: B: PDB Molecule:bifunctional protein fold; PDBTitle: crystal structure of fold bifunctional protein from campylobacter2 jejuni
12 | c2zoeA_ |
|  | 31.2 | 23 | PDB header:toxin Chain: A: PDB Molecule:hemagglutinin components ha3; PDBTitle: ha3 subcomponent of clostridium botulinum type c progenitor2 toxin, complex with n-acetylneuramic acid
13 | c2d49A_ |
|  | 28.5 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:chitinase c; PDBTitle: solution structure of the chitin-binding domain of2 streptomyces griseus chitinase c
14 | c2c2xB_ |
|  | 28.4 | 14 | PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase- PDBTitle: three dimensional structure of bifunctional2 methylenetetrahydrofolate dehydrogenase-cyclohydrolase3 from mycobacterium tuberculosis
15 | c2e0iD_ |
|  | 28.3 | 12 | PDB header:lyase Chain: D: PDB Molecule:432aa long hypothetical deoxyribodipyrimidine photolyase; PDBTitle: crystal structure of archaeal photolyase from sulfolobus tokodaii with2 two fad molecules: implication of a novel light-harvesting cofactor
16 | d1a4ia2 |
|  | 26.5 | 16 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
17 | d1aiwa_ |
|  | 25.7 | 7 | Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain
18 | d2piea1 |
|  | 25.4 | 21 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
19 | d1vkza2 |
|  | 24.2 | 21 | Fold:PreATP-grasp domain Superfamily:PreATP-grasp domain Family:BC N-terminal domain-like
20 | d1yqea1 |
|  | 24.1 | 8 | Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like
21 | c2gfqC_ |
| not modelled | 23.6 | 9 | PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii
22 | c3lzkC_ |
| not modelled | 23.4 | 18 | PDB header:hydrolase Chain: C: PDB Molecule:fumarylacetoacetate hydrolase family protein; PDBTitle: the crystal structure of a probably aromatic amino acid2 degradation protein from sinorhizobium meliloti 1021
23 | c3cr8C_ |
| not modelled | 22.7 | 27 | PDB header:transferase Chain: C: PDB Molecule:sulfate adenylyltranferase, adenylylsulfate PDBTitle: hexameric aps kinase from thiobacillus denitrificans
24 | d1b8aa1 |
| not modelled | 22.6 | 6 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain
25 | d1goia1 |
| not modelled | 21.8 | 18 | Fold:WW domain-like Superfamily:Carbohydrate binding domain Family:Carbohydrate binding domain
26 | d1o6aa_ |
| not modelled | 21.5 | 13 | Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA)
27 | d1v58a1 |
| not modelled | 21.3 | 13 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like
28 | d2gqba1 |
| not modelled | 21.2 | 35 | Fold:RPA2825-like Superfamily:RPA2825-like Family:RPA2825-like
29 | c3orsD_ |
| not modelled | 21.1 | 14 | PDB header:isomerase,biosynthetic protein Chain: D: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide mutase; PDBTitle: crystal structure of n5-carboxyaminoimidazole ribonucleotide mutase2 from staphylococcus aureus
30 | d2gfqa1 |
| not modelled | 20.5 | 9 | Fold:Phosphorylase/hydrolase-like Superfamily:AF0625-like Family:AF0625-like
31 | c2crvA_ |
| not modelled | 19.6 | 18 | PDB header:translation Chain: A: PDB Molecule:translation initiation factor if-2; PDBTitle: solution structure of c-terminal domain of mitochondrial2 translational initiationfactor 2
32 | d1vjea_ |
| not modelled | 19.3 | 25 | Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS
33 | d1ooya2 |
| not modelled | 19.2 | 19 | Fold:NagB/RpiA/CoA transferase-like Superfamily:NagB/RpiA/CoA transferase-like Family:CoA transferase alpha subunit-like
34 | d1muja2 |
| not modelled | 18.4 | 35 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
35 | d1ni9a_ |
| not modelled | 18.1 | 23 | Fold:Carbohydrate phosphatase Superfamily:Carbohydrate phosphatase Family:GlpX-like bacterial fructose-1,6-bisphosphatase
36 | c3trhI_ |
| not modelled | 17.8 | 10 | PDB header:lyase Chain: I: PDB Molecule:phosphoribosylaminoimidazole carboxylase PDBTitle: structure of a phosphoribosylaminoimidazole carboxylase catalytic2 subunit (pure) from coxiella burnetii
37 | c2j7pA_ |
| not modelled | 17.4 | 17 | PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy
38 | c3uotB_ |
| not modelled | 17.3 | 6 | PDB header:cell cycle Chain: B: PDB Molecule:mediator of dna damage checkpoint protein 1; PDBTitle: crystal structure of mdc1 fha domain in complex with a phosphorylated2 peptide from the mdc1 n-terminus
39 | d2piaa1 |
| not modelled | 17.1 | 0 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
40 | c2qv6D_ |
| not modelled | 17.0 | 9 | PDB header:hydrolase Chain: D: PDB Molecule:gtp cyclohydrolase iii; PDBTitle: gtp cyclohydrolase iii from m. jannaschii (mj0145)2 complexed with gtp and metal ions
41 | d1edza2 |
| not modelled | 17.0 | 10 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Tetrahydrofolate dehydrogenase/cyclohydrolase
42 | d2cp6a1 |
| not modelled | 16.5 | 15 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
43 | d2oz4a1 |
| not modelled | 16.2 | 31 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:C2 set domains
44 | d1j98a_ |
| not modelled | 16.1 | 45 | Fold:LuxS/MPP-like metallohydrolase Superfamily:LuxS/MPP-like metallohydrolase Family:Autoinducer-2 production protein LuxS
45 | d2vzsa5 |
| not modelled | 16.1 | 15 | Fold:TIM beta/alpha-barrel Superfamily:(Trans)glycosidases Family:beta-glycanases
46 | d1g3ga_ |
| not modelled | 16.0 | 17 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
47 | d1fnda1 |
| not modelled | 15.8 | 29 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
48 | c3ff4A_ |
| not modelled | 15.6 | 10 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of uncharacterized protein chu_1412
49 | d2eyqa1 |
| not modelled | 15.5 | 6 | Fold:SH3-like barrel Superfamily:CarD-like Family:CarD-like
50 | c3c00B_ |
| not modelled | 15.1 | 11 | PDB header:membrane protein, protein transport Chain: B: PDB Molecule:escu; PDBTitle: crystal structural of the mutated g247t escu/spas c-terminal domain
51 | c3eeqB_ |
| not modelled | 15.0 | 31 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative cobalamin biosynthesis protein g PDBTitle: crystal structure of a putative cobalamin biosynthesis2 protein g homolog from sulfolobus solfataricus
52 | d1jr2a_ |
| not modelled | 14.8 | 21 | Fold:HemD-like Superfamily:HemD-like Family:HemD-like
53 | c1jr2A_ |
| not modelled | 14.8 | 21 | PDB header:lyase Chain: A: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: structure of uroporphyrinogen iii synthase
54 | d1n0ua3 |
| not modelled | 14.7 | 10 | Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components
55 | c2l9dA_ |
| not modelled | 14.7 | 17 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: solution structure of the protein yp_546394.1, the first structural2 representative of the pfam family pf12112
56 | d1uhta_ |
| not modelled | 14.4 | 13 | Fold:SMAD/FHA domain Superfamily:SMAD/FHA domain Family:FHA domain
57 | d1sf8a_ |
| not modelled | 14.0 | 23 | Fold:HSP90 C-terminal domain Superfamily:HSP90 C-terminal domain Family:HSP90 C-terminal domain
58 | c2iheA_ |
| not modelled | 13.9 | 15 | PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of wild-type single-stranded dna binding protein2 from thermus aquaticus
59 | c3kw0D_ |
| not modelled | 13.4 | 12 | PDB header:hydrolase Chain: D: PDB Molecule:cysteine peptidase; PDBTitle: crystal structure of cysteine peptidase (np_982244.1) from bacillus2 cereus atcc 10987 at 2.50 a resolution
60 | d1a5ra_ |
| not modelled | 13.4 | 11 | Fold:beta-Grasp (ubiquitin-like) Superfamily:Ubiquitin-like Family:Ubiquitin-related
61 | c3qq5A_ |
| not modelled | 13.3 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
62 | d1owla1 |
| not modelled | 13.0 | 14 | Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain
63 | c3fmxX_ |
| not modelled | 13.0 | 17 | PDB header:oxidoreductase Chain: X: PDB Molecule:tartrate dehydrogenase/decarboxylase; PDBTitle: crystal structure of tartrate dehydrogenase from pseudomonas2 putida complexed with nadh
64 | c1tezB_ |
| not modelled | 12.9 | 14 | PDB header:lyase/dna Chain: B: PDB Molecule:deoxyribodipyrimidine photolyase; PDBTitle: complex between dna and the dna photolyase from anacystis nidulans
65 | d1es0a2 |
| not modelled | 12.8 | 35 | Fold:MHC antigen-recognition domain Superfamily:MHC antigen-recognition domain Family:MHC antigen-recognition domain
66 | c3mxnB_ |
| not modelled | 12.6 | 24 | PDB header:replication Chain: B: PDB Molecule:recq-mediated genome instability protein 2; PDBTitle: crystal structure of the rmi core complex
67 | c3cyyA_ |
| not modelled | 12.5 | 22 | PDB header:peptide binding protein Chain: A: PDB Molecule:tight junction protein zo-1; PDBTitle: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide
68 | c2jlhA_ |
| not modelled | 12.5 | 13 | PDB header:protein transport Chain: A: PDB Molecule:yop proteins translocation protein u; PDBTitle: crystal structure of the cytoplasmic domain of yersinia2 pestis yscu n263a mutant
69 | c3en2A_ |
| not modelled | 12.4 | 20 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:probable primosomal replication protein n; PDBTitle: three-dimensional structure of the protein prib from2 ralstonia solanacearum at the resolution 2.3a. northeast3 structural genomics consortium target rsr213c.
70 | d2gc6a1 |
| not modelled | 12.4 | 18 | Fold:MurD-like peptide ligases, peptide-binding domain Superfamily:MurD-like peptide ligases, peptide-binding domain Family:Folylpolyglutamate synthetase, C-terminal domain
71 | d1u3da1 |
| not modelled | 12.3 | 20 | Fold:Cryptochrome/photolyase FAD-binding domain Superfamily:Cryptochrome/photolyase FAD-binding domain Family:Cryptochrome/photolyase FAD-binding domain
72 | c3chvA_ |
| not modelled | 12.3 | 18 | PDB header:metal binding protein Chain: A: PDB Molecule:prokaryotic domain of unknown function (duf849) with a tim PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 member (spoa0042) from silicibacter pomeroyi dss-3 at 1.45 a3 resolution
73 | c1a4iB_ |
| not modelled | 12.0 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:methylenetetrahydrofolate dehydrogenase / PDBTitle: human tetrahydrofolate dehydrogenase / cyclohydrolase
74 | c3ibgF_ |
| not modelled | 12.0 | 17 | PDB header:hydrolase Chain: F: PDB Molecule:atpase, subunit of the get complex; PDBTitle: crystal structure of aspergillus fumigatus get3 with bound2 adp
75 | c2oqjF_ |
| not modelled | 11.9 | 71 | PDB header:immune system Chain: F: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
76 | d2coza1 |
| not modelled | 11.8 | 16 | Fold:SH3-like barrel Superfamily:Cap-Gly domain Family:Cap-Gly domain
77 | c3o59X_ |
| not modelled | 11.6 | 46 | PDB header:transferase Chain: X: PDB Molecule:dna polymerase ii large subunit; PDBTitle: dna polymerase d large subunit dp2(1-300) from pyrococcus horikoshii
78 | c3t7yB_ |
| not modelled | 11.6 | 11 | PDB header:protein transport Chain: B: PDB Molecule:yop proteins translocation protein u; PDBTitle: structure of an autocleavage-inactive mutant of the cytoplasmic domain2 of ct091, the yscu homologue of chlamydia trachomatis
79 | d2f2ab1 |
| not modelled | 11.5 | 19 | Fold:GatB/YqeY motif Superfamily:GatB/YqeY motif Family:GatB/GatE C-terminal domain-like
80 | d1c0aa1 |
| not modelled | 11.5 | 21 | Fold:OB-fold Superfamily:Nucleic acid-binding proteins Family:Anticodon-binding domain
81 | d2cnda1 |
| not modelled | 11.4 | 25 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
82 | d4ubpb_ |
| not modelled | 11.1 | 17 | Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit
83 | d1o9ya_ |
| not modelled | 11.1 | 20 | Fold:Surface presentation of antigens (SPOA) Superfamily:Surface presentation of antigens (SPOA) Family:Surface presentation of antigens (SPOA)
84 | d1e9ya1 |
| not modelled | 11.0 | 12 | Fold:beta-clip Superfamily:Urease, beta-subunit Family:Urease, beta-subunit
85 | d2ew0a1 |
| not modelled | 11.0 | 22 | Fold:VC0467-like Superfamily:VC0467-like Family:VC0467-like
86 | c3d8tB_ |
| not modelled | 10.9 | 20 | PDB header:lyase Chain: B: PDB Molecule:uroporphyrinogen-iii synthase; PDBTitle: thermus thermophilus uroporphyrinogen iii synthase
87 | c2oqjL_ |
| not modelled | 10.8 | 71 | PDB header:immune system Chain: L: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
88 | c2oqjI_ |
| not modelled | 10.8 | 71 | PDB header:immune system Chain: I: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
89 | c2oqjC_ |
| not modelled | 10.8 | 71 | PDB header:immune system Chain: C: PDB Molecule:peptide 2g12.1 (acppshvldmrsgtclaaegk); PDBTitle: crystal structure analysis of fab 2g12 in complex with peptide 2g12.1
90 | d1e32a1 |
| not modelled | 10.8 | 10 | Fold:Double psi beta-barrel Superfamily:ADC-like Family:Cdc48 N-terminal domain-like
91 | d1pcfa_ |
| not modelled | 10.6 | 47 | Fold:ssDNA-binding transcriptional regulator domain Superfamily:ssDNA-binding transcriptional regulator domain Family:Transcriptional coactivator PC4 C-terminal domain
92 | c3rfuC_ |
| not modelled | 10.4 | 15 | PDB header:hydrolase, membrane protein Chain: C: PDB Molecule:copper efflux atpase; PDBTitle: crystal structure of a copper-transporting pib-type atpase
93 | c1zgxA_ |
| not modelled | 10.3 | 18 | PDB header:hydrolase Chain: A: PDB Molecule:guanyl-specific ribonuclease sa; PDBTitle: crystal structure of ribonuclease mutant
94 | c2ihfA_ |
| not modelled | 10.3 | 15 | PDB header:dna binding protein Chain: A: PDB Molecule:single-stranded dna-binding protein; PDBTitle: crystal structure of deletion mutant delta 228-252 r190a of the2 single-stranded dna binding protein from thermus aquaticus
95 | d1sm4a1 |
| not modelled | 10.2 | 21 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
96 | d1qx4a1 |
| not modelled | 10.2 | 14 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
97 | d1xnea_ |
| not modelled | 10.2 | 15 | Fold:PUA domain-like Superfamily:PUA domain-like Family:ProFAR isomerase associated domain
98 | d1krha1 |
| not modelled | 10.1 | 29 | Fold:Reductase/isomerase/elongation factor common domain Superfamily:Riboflavin synthase domain-like Family:Ferredoxin reductase FAD-binding domain-like
99 | c3op0B_ |
| not modelled | 10.1 | 58 | PDB header:signaling protein/signaling protein regu Chain: B: PDB Molecule:signal transduction protein cbl-c; PDBTitle: crystal structure of cbl-c (cbl-3) tkb domain in complex with egfr2 py1069 peptide

Binding site prediction |

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

Transmembrane helix prediction |

Transmembrane helices have been predicted in your sequence to adopt the topology shown below

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group
Imperial College London
Lawrence Kelley, Benjamin Jefferys
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Terms and Conditions
Component software
Template detection: HHpred 1.51
Secondary structure prediction: Psi-pred 2.5
Disorder prediction: Disopred 2.4
Transmembrane prediction: Memsat_SVM
Multi-template modelling and ab initio: Poing 1.0