Phyre 2 alignment of P14407 with c1tezB_

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Job Description | P14407
Confidence | 12.88% | Date | Thu Jan 5 11:34:03 GMT 2012
Rank | 64 | Aligned Residues | 50
% Identity | 14% | Template | c1tezB_
PDB info | PDB header:lyase/dna | Chain: B: PDB Molecule:deoxyribodipyrimidine photolyase; | PDBTitle: complex between dna and the dna photolyase from anacystis nidulans
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 329 | 330 | . | . | . | . | . | . | . | . | . | 340 | . |  |  |  |  | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 |  |  |  | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | R | E | G | I | W | I | E | K | L | E | H | N | . | . | . | . | P | G | Q | Y | I | P | Q | E | L | R | Q | A | G | E | G | E | A | V | K | . | . | . | V | D | L | N | R | P | M | K | E | I | L | A | Q | L | S | Q | Y | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | A | T | A | T | Y | I | K | R | W | L | P | E | L | R | H | V | H | P | K | D | L | I | S | G | E | I | T | P | I | E | R | R | G | Y | P | A | P | I | V | N | H | N | L | R | Q | K | Q | F | K | A | L | Y | N | Q | L | K
Template Known Secondary structure |  |  | T | T |  |  |  |  |  |  |  |  | G | G | G | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | T | T |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 416 | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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