BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (654 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria... 1125 0.0 UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae Re... 861 0.0 UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providenc... 761 0.0 UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n... 759 0.0 UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae Re... 758 0.0 UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Prot... 593 e-168 UniRef50_D1TKM6 Putative CheA signal transduction histidine kina... 584 e-165 UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Ta... 573 e-162 UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 557 e-157 UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Ta... 542 e-152 UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Ta... 530 e-149 UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadacea... 526 e-148 UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Ta... 520 e-146 UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Ta... 508 e-142 UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-lik... 501 e-140 UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Ta... 498 e-139 UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Ta... 494 e-138 UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 T... 479 e-133 UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related ... 473 e-131 UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Ta... 470 e-131 UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Mori... 461 e-128 UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium R... 459 e-127 UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3... 458 e-127 UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomo... 454 e-126 UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH7... 451 e-125 UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacter... 449 e-124 UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Ta... 444 e-123 UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pse... 444 e-123 UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Ta... 436 e-120 UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blanden... 433 e-120 UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 T... 432 e-119 UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax... 429 e-118 UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Ta... 424 e-117 UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 ... 423 e-117 UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 T... 415 e-114 UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 414 e-114 UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Ta... 412 e-113 UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzl... 404 e-111 UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9Q... 403 e-110 UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Ta... 396 e-108 UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=C... 394 e-108 UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Ta... 391 e-107 UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Ta... 390 e-107 UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobact... 387 e-106 UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-lik... 386 e-105 UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Ta... 385 e-105 UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepI... 384 e-105 UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 T... 377 e-103 UniRef50_P21813 Chemotaxis protein cheA (Fragment) n=25 Tax=Prot... 377 e-103 UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 T... 375 e-102 UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepI... 375 e-102 UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteoba... 374 e-102 UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Ta... 372 e-101 UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Ta... 372 e-101 UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelo... 372 e-101 UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Ta... 371 e-101 UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata o... 369 e-100 UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae... 368 e-100 UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnik... 367 e-100 UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Ta... 365 4e-99 UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=... 364 7e-99 UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax... 360 1e-97 UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 359 2e-97 UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Ta... 357 7e-97 UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Ta... 357 8e-97 UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-lik... 357 1e-96 UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-lik... 354 6e-96 UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HS... 353 1e-95 UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 T... 353 2e-95 UniRef50_Q6AJV5 Related to two-component system sensory/regulato... 352 3e-95 UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Ta... 351 5e-95 UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein... 349 2e-94 UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 ... 349 2e-94 UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Ta... 346 2e-93 UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Ta... 344 6e-93 UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acet... 343 9e-93 UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepI... 343 1e-92 UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Ta... 343 1e-92 UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 T... 343 2e-92 UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-lik... 342 3e-92 UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Ta... 342 4e-92 UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepI... 341 4e-92 UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 R... 341 5e-92 UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax... 341 5e-92 UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobia... 340 7e-92 UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related ... 340 8e-92 UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Ta... 338 3e-91 UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 338 3e-91 UniRef50_C1A592 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aur... 338 4e-91 UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Ta... 338 4e-91 UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Ta... 338 5e-91 UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Ta... 337 9e-91 UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Ta... 337 1e-90 UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditroph... 336 2e-90 UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobact... 336 2e-90 UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter ox... 335 3e-90 UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Ta... 335 4e-90 UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 T... 334 6e-90 UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 T... 331 5e-89 UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Ta... 330 8e-89 UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Ta... 330 1e-88 UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Ta... 330 1e-88 UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Ta... 328 3e-88 UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured m... 328 6e-88 UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Ta... 327 1e-87 UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 T... 326 2e-87 UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 T... 326 2e-87 UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-lik... 326 2e-87 UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 326 2e-87 UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Ta... 325 3e-87 UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae R... 325 4e-87 UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-lik... 325 4e-87 UniRef50_C4XQQ6 Chemotaxis protein CheA n=2 Tax=Desulfovibrio Re... 324 7e-87 UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 T... 324 8e-87 UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 T... 324 9e-87 UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Ta... 323 9e-87 UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae R... 322 3e-86 UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW... 322 4e-86 UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1H... 321 5e-86 UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Ta... 320 1e-85 UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Ta... 319 2e-85 UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V49... 318 3e-85 UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria R... 318 4e-85 UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related ... 318 4e-85 UniRef50_Q0AYL2 Putative CheA signal transduction histidine kina... 318 5e-85 UniRef50_B5YIY0 CheA n=1 Tax=Thermodesulfovibrio yellowstonii DS... 317 8e-85 UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Ocea... 317 8e-85 UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 317 1e-84 UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Ta... 315 2e-84 UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Ta... 315 2e-84 UniRef50_A3ZLD6 Two-component system sensory/regulatory protein-... 315 3e-84 UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein... 315 4e-84 UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Ta... 314 8e-84 UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Ta... 313 1e-83 UniRef50_B4UFH8 CheA signal transduction histidine kinase n=3 Ta... 313 2e-83 UniRef50_Q7NZA8 Chemotaxis protein CheA n=2 Tax=Betaproteobacter... 313 2e-83 UniRef50_Q67P71 Two-component sensor histidine kinase involved i... 311 4e-83 UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Ta... 311 4e-83 UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Ta... 311 4e-83 UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=... 311 5e-83 UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Ta... 310 1e-82 UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Ta... 309 2e-82 UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Ta... 309 3e-82 UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK... 308 4e-82 UniRef50_A5G500 CheA signal transduction histidine kinase n=2 Ta... 308 4e-82 UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Ta... 308 4e-82 UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Ta... 308 5e-82 UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales ... 308 6e-82 UniRef50_C6HWL4 Putative signal transduction histidine kinase (C... 307 7e-82 UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerot... 306 1e-81 UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Ta... 306 1e-81 UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 T... 306 2e-81 UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Ta... 306 2e-81 UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 T... 306 2e-81 UniRef50_D2QXS7 CheA signal transduction histidine kinase n=1 Ta... 305 5e-81 UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis ME... 305 5e-81 UniRef50_C7LPE3 CheA signal transduction histidine kinase n=1 Ta... 304 7e-81 UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile... 303 1e-80 UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Ta... 303 2e-80 UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Ta... 303 2e-80 UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Ta... 302 2e-80 UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Ta... 302 2e-80 UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Ta... 302 3e-80 UniRef50_Q21IQ8 ATP-binding region, ATPase-like protein n=53 Tax... 302 3e-80 UniRef50_Q8TLH0 Chemotaxis sensor histidine kinase n=2 Tax=Metha... 302 3e-80 UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Lept... 301 5e-80 UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Ta... 301 6e-80 UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor ... 301 6e-80 UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Ta... 301 6e-80 UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio ma... 301 6e-80 UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Ta... 301 7e-80 UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vu... 301 7e-80 UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Ta... 300 8e-80 UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 299 2e-79 UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Ta... 298 5e-79 UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Ta... 297 8e-79 UniRef50_Q12YX0 Chemotaxis protein CheA n=1 Tax=Methanococcoides... 297 1e-78 UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Ta... 297 1e-78 UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Ta... 297 1e-78 UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira inter... 296 1e-78 UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Ta... 296 2e-78 UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Ta... 296 2e-78 UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alp... 295 5e-78 UniRef50_A6W0U9 CheA signal transduction histidine kinase n=32 T... 295 6e-78 UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A... 294 8e-78 UniRef50_Q2SBX8 Chemotaxis protein histidine kinase and related ... 293 2e-77 UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Lept... 293 2e-77 UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 T... 292 2e-77 UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococ... 292 2e-77 UniRef50_C1A888 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aur... 292 2e-77 UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 T... 292 3e-77 UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 292 3e-77 UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Ta... 291 4e-77 UniRef50_A0LIT5 CheA signal transduction histidine kinases n=1 T... 291 4e-77 UniRef50_Q2RZD1 Chemotaxis histidine kinase n=1 Tax=Salinibacter... 291 5e-77 UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Ta... 291 7e-77 UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Ta... 290 1e-76 UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia Re... 290 1e-76 UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=... 289 2e-76 UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermoc... 288 4e-76 UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Ta... 288 6e-76 UniRef50_B1M893 CheA signal transduction histidine kinase n=11 T... 287 8e-76 UniRef50_B9MPE2 Putative CheA signal transduction histidine kina... 286 2e-75 UniRef50_B3EBI4 CheA signal transduction histidine kinase n=1 Ta... 285 3e-75 UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribac... 285 4e-75 UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostri... 285 5e-75 UniRef50_A8TEK5 CheA signal transduction histidine kinase n=1 Ta... 284 6e-75 UniRef50_Q3ADA4 Chemotaxis protein CheA n=1 Tax=Carboxydothermus... 284 7e-75 UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 284 9e-75 UniRef50_C0GP18 CheA signal transduction histidine kinase n=1 Ta... 283 2e-74 UniRef50_Q44737 Chemotaxis protein cheA n=24 Tax=Borrelia RepID=... 283 2e-74 UniRef50_A9F1P0 Chemotaxis protein CheA n=2 Tax=Sorangium cellul... 283 2e-74 UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 T... 282 3e-74 UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 T... 281 4e-74 UniRef50_P96123 Chemotaxis protein cheA n=5 Tax=Treponema RepID=... 281 4e-74 UniRef50_A7H814 CheA signal transduction histidine kinase n=5 Ta... 281 4e-74 UniRef50_C9QIV3 Chemotaxis protein CheA n=2 Tax=Bacteria RepID=C... 281 5e-74 UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK... 281 5e-74 UniRef50_B4VZE9 CheW-like domain protein n=1 Tax=Microcoleus cht... 280 1e-73 UniRef50_Q6LU38 Hypothetical chemotaxis histidine protein kinase... 280 1e-73 UniRef50_D2LCX3 CheA signal transduction histidine kinase n=1 Ta... 280 1e-73 UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis A... 280 2e-73 UniRef50_A4XHP7 Putative CheA signal transduction histidine kina... 279 2e-73 UniRef50_UPI00016C4BDB putative CheA signal transduction histidi... 278 5e-73 UniRef50_C7M283 CheA signal transduction histidine kinase n=1 Ta... 277 1e-72 UniRef50_A6G722 Chemotaxis protein CheA n=1 Tax=Plesiocystis pac... 276 2e-72 UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacte... 276 3e-72 UniRef50_A0LDL8 CheA signal transduction histidine kinases n=1 T... 275 3e-72 UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Ta... 275 5e-72 UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacte... 273 1e-71 UniRef50_D2QXD7 CheA signal transduction histidine kinase n=1 Ta... 273 2e-71 UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 272 3e-71 UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Ta... 271 6e-71 UniRef50_Q64CE2 Chemotaxis histidine kinase n=3 Tax=environmenta... 271 8e-71 UniRef50_Q2FMT1 CheA signal transduction histidine kinases n=4 T... 271 9e-71 UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Ta... 270 1e-70 UniRef50_B6BNV1 Chemotaxis protein CheA n=1 Tax=Campylobacterale... 270 1e-70 UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase... 270 1e-70 UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase ... 269 2e-70 UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacterio... 269 3e-70 UniRef50_A3ZQH0 Chemotaxis protein CheA n=1 Tax=Blastopirellula ... 269 3e-70 UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Metha... 266 1e-69 UniRef50_D2RYF1 CheA signal transduction histidine kinase n=1 Ta... 266 3e-69 UniRef50_B8DJY0 CheA signal transduction histidine kinase n=1 Ta... 265 3e-69 UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein... 265 5e-69 UniRef50_B5W7Y8 CheA signal transduction histidine kinase n=2 Ta... 263 2e-68 UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla mari... 263 2e-68 UniRef50_A5F8D5 Chemotaxis protein CheA n=25 Tax=Vibrio RepID=A5... 259 2e-67 UniRef50_C1SIR9 Chemotaxis protein histidine kinase-like protein... 259 2e-67 UniRef50_Q1D353 Chemotaxis protein CheA n=2 Tax=Cystobacterineae... 259 3e-67 >UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria RepID=CHEA_SALTY Length = 671 Score = 1125 bits (2910), Expect = 0.0, Method: Compositional matrix adjust. Identities = 568/674 (84%), Positives = 598/674 (88%), Gaps = 23/674 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMDISDFYQTFFDEADELLADMEQHLL L PE+PDAEQLNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSMDISDFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK S+EPDAASF+YIC Sbjct: 61 ILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKNSEEPDAASFEYIC 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR-----RIILSRLKAGEVDLL 175 ALRQLALEAKGET AV + ++ + ++ + ++SPR RI+LSRLKA EVDLL Sbjct: 121 NALRQLALEAKGETTPAVVETAALSAAIQEESVAETESPRDESKLRIVLSRLKANEVDLL 180 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP----- 230 EEELG+L TLTDVVKGADSLSA L G +AEDDI AVLCFVIEADQI FE V +P Sbjct: 181 EEELGNLATLTDVVKGADSLSATLDGSVAEDDIVAVLCFVIEADQIAFEKVVAAPVEKAQ 240 Query: 231 ----------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE 280 P K AA + GR EK R ESTSIRVAVEKVDQLINLVGE Sbjct: 241 EKTEVAPVAPPAVVAPAAKSAAHEHHAGR---EKPARERESTSIRVAVEKVDQLINLVGE 297 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVITQSMLAQRS+ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR+PRLV Sbjct: 298 LVITQSMLAQRSNELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRFPRLV 357 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE+PEKRL AGKN V Sbjct: 358 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEMPEKRLEAGKNVV 417 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFS 460 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKA SQG+ V+ENM+DDEV MLIFAPGFS Sbjct: 418 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAMSQGMAVNENMTDDEVGMLIFAPGFS 477 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TAEQVTDVSGRGVGMDVVKRNIQ+MGGHVEIQSKQG+GTTIRILLPLTLAILDGMSVRVA Sbjct: 478 TAEQVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGSGTTIRILLPLTLAILDGMSVRVA 537 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 EVFILPLNAVMESLQPRE DLHPLAGGERVLEVRGEYLP+VELWKVF+V GAKTEATQG Sbjct: 538 GEVFILPLNAVMESLQPREEDLHPLAGGERVLEVRGEYLPLVELWKVFDVDGAKTEATQG 597 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 IVVILQS GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL Sbjct: 598 IVVILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 657 Query: 641 QAINREQRMANTAA 654 Q +NREQRMA TAA Sbjct: 658 QGLNREQRMAITAA 671 >UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae RepID=B4EYQ3_PROMH Length = 739 Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/737 (60%), Positives = 530/737 (71%), Gaps = 87/737 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELLADMEQHLL+L P+ PD EQLNAIFR+AHSIKGGA TFGF L Sbjct: 1 MDITEFYQTFFDEADELLADMEQHLLLLDPQNPDQEQLNAIFRSAHSIKGGAATFGFVKL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+TTH++ENLLD ARR EM L DIINLFLE KDIMQ+QLDA+K SQEPD +F+YIC+ Sbjct: 61 QQTTHVLENLLDSARRHEMVLTDDIINLFLEAKDIMQQQLDAHKNSQEPDEETFNYICEK 120 Query: 123 LRQLALEAKGETPSA-------------------VTRLSVVAKSEPQDEQSRSQSP---- 159 LRQLALE K E + +T +S V ++ DE S+ P Sbjct: 121 LRQLALEVKEEQSTQLGEGSDSVSLTESNAPTENITPVSAVHHTD--DELSKENQPLATA 178 Query: 160 ----------RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDIT 209 IILS LK ++DL+ +EL HL ++ V K L A+L ++DI+ Sbjct: 179 NTPNTDGLYQHHIILSDLKETDIDLMLDELKHLGEVSQVEKQHHGLEAVLKTTATQEDIS 238 Query: 210 AVLCFVIEADQITFETVEVSP-KISTPPVLKLAAEQAPT---------GRVEREKTTRSN 259 AVLCFVIE +QI+F V + K+++ + AE +P+ + E+ T N Sbjct: 239 AVLCFVIEPEQISFANVAATEEKVTSTDKTQEQAEHSPSSVTESIQPAAQTEQPATIEKN 298 Query: 260 ---------------------------------------ESTSIRVAVEKVDQLINLVGE 280 ESTSIRVAVEKVDQLINLVGE Sbjct: 299 VAELNKNSQADEVTKVATTLPPTATPAPARKPVVAQAKTESTSIRVAVEKVDQLINLVGE 358 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVITQSMLAQ S L+P H DL++ + QLQRN+RDLQESVMSIRMMPMEYVFSR+PR+V Sbjct: 359 LVITQSMLAQHSDTLEPSIHSDLLSCIAQLQRNSRDLQESVMSIRMMPMEYVFSRFPRVV 418 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDLAGK+ K+VEL ++GSSTELDKSLIE+IIDPLTHLVRNSLDHGIE+P R+AAGK Sbjct: 419 RDLAGKMHKKVELNMIGSSTELDKSLIEKIIDPLTHLVRNSLDHGIEMPADRIAAGKPEA 478 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFS 460 G L LSAEHQGGNICIEVTDDGAGLNRERIL KA S GL VSENMS++EVAMLIFAPGFS Sbjct: 479 GQLTLSAEHQGGNICIEVTDDGAGLNRERILKKAISSGLAVSENMSNEEVAMLIFAPGFS 538 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TAE VTDVSGRGVGMDVVKRNIQ+MGG ++I + G GT IRILLPLTLAILDGMSV+V Sbjct: 539 TAEVVTDVSGRGVGMDVVKRNIQEMGGQIQISFEVGKGTRIRILLPLTLAILDGMSVKVN 598 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 DEVFILPL V+ SLQP E D++PLAG E++L+VRGEYLP++EL + FN+ GA+T+ TQ Sbjct: 599 DEVFILPLGTVVSSLQPEEEDIYPLAGDEKLLQVRGEYLPLIELHRTFNIEGAQTDITQA 658 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 I VI+QS GRRYALLVD+L+GQHQVVVKN+ESNYRKVPGISAATI+GDGSVALI+DV L Sbjct: 659 IAVIVQSAGRRYALLVDKLVGQHQVVVKNIESNYRKVPGISAATIMGDGSVALILDVPEL 718 Query: 641 QAINREQ---RMANTAA 654 Q ++ Q + NT A Sbjct: 719 QRLSHSQMTEKKKNTTA 735 >UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34617 Length = 685 Score = 761 bits (1966), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/671 (59%), Positives = 487/671 (72%), Gaps = 32/671 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELL DMEQHLL L P PD+EQLNAIFR+AHSIKGGA TFGF+ L Sbjct: 1 MDITEFYQTFFDEADELLRDMEQHLLELDPFDPDSEQLNAIFRSAHSIKGGAATFGFTQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TTH +ENLLD+AR E+ L DII++FL+ KD+M QLDAYK PD +F IC+ Sbjct: 61 QNTTHTLENLLDKARHDELTLTPDIIDVFLDAKDVMASQLDAYKNDSLPDEDTFKRICEV 120 Query: 123 LRQLALEAK--GETPSAVTRLSV---VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 L ++ A+ ET +A+ V V + P +Q I L++LK EVDLL + Sbjct: 121 LSRVENRAEEVAETGTAIAETKVEDAVVEDTPA-KQGEYSHYFMISLNQLKENEVDLLAD 179 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS-------- 229 EL L K A+SL A + + DDI+ VLCFV++ QI+ E + + Sbjct: 180 ELSLFGHLYHTEKTANSLQAWVGTNTDIDDISGVLCFVVDESQISHEVISFADCLAFSKE 239 Query: 230 ----------------PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 P++ TP A APT + +S+SIRVAVEKVDQ Sbjct: 240 ETLLNDDKVAANEVTEPQVDTPQ--SSAKPAAPTTAKKTAIAKPKGDSSSIRVAVEKVDQ 297 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 LINLVGELVI QSML Q S +D + DL++S+ QL+RN+R LQESVMSIRMMPM+YVF Sbjct: 298 LINLVGELVIIQSMLTQHSQHVDQNEYSDLLSSIVQLERNSRALQESVMSIRMMPMDYVF 357 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 SR+PR+VRD+A KLGK++EL + GSSTELDKSLIERI+DPL HLVRNSLDHGIE PE R+ Sbjct: 358 SRFPRMVRDIASKLGKKIELKVEGSSTELDKSLIERIVDPLNHLVRNSLDHGIEKPEVRV 417 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAML 453 A GK G L L+A HQ GNICIEV DDGAGLNRERILAKA SQG+ V + MS+DEVAML Sbjct: 418 ANGKPEAGTLTLAAAHQSGNICIEVRDDGAGLNRERILAKAKSQGMNVHDGMSNDEVAML 477 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 I APGFSTAE VTDVSGRGVGMDVVKRNIQ MGG ++I +G GT IRILLPLTLAILD Sbjct: 478 IMAPGFSTAEVVTDVSGRGVGMDVVKRNIQDMGGRIQIGFTEGKGTIIRILLPLTLAILD 537 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 GMSV+VA++VFI+PL+A++ +LQPR+ D++ LAG E++L VRGEYLP+VEL +VF++ A Sbjct: 538 GMSVKVAEDVFIVPLSAIISTLQPRQEDIYRLAGEEKMLLVRGEYLPLVELHQVFSIEEA 597 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 + IV+I+Q+ G R+ALLVD+L+GQ QVVVKN+ESNYRK+PGISAATI+GDGSVAL Sbjct: 598 ERNLDNSIVLIIQNAGHRFALLVDKLVGQQQVVVKNIESNYRKIPGISAATIMGDGSVAL 657 Query: 634 IVDVSALQAIN 644 I+DV+ LQ +N Sbjct: 658 ILDVAELQKMN 668 >UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n=14 Tax=Proteobacteria RepID=B2AI50_CUPTR Length = 675 Score = 759 bits (1959), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/655 (61%), Positives = 477/655 (72%), Gaps = 14/655 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + +DI+ FYQTFF+EA+ELL +MEQ LL L EAPDAE LNAIFRAAHSIKGGA TFGF+ Sbjct: 8 VDIDITQFYQTFFEEAEELLVEMEQLLLGLDIEAPDAEHLNAIFRAAHSIKGGAATFGFA 67 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L ETTH+ ENLLD RR E+ L II+ FLETKD++Q+QL+AY+ EPD + IC Sbjct: 68 ALTETTHIFENLLDRTRRQELALTRTIIDTFLETKDVLQDQLNAYRNGTEPDPETLARIC 127 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L+QLA EA G + + + + + +I L ++ A + LL EEL Sbjct: 128 AVLQQLAQEAAGHDAAPAPAPAPAPVAAAAPAAAPAGGGLKIRLIKVSASDQALLREELA 187 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 +L +T + L L + DDI AV CFVI+ DQI E +P + P Sbjct: 188 NLGDITGQQETNGELVVWLNTQCSADDIIAVCCFVIDIDQIVIEAAAGAPAAAPAPAPAE 247 Query: 241 AAEQAPTGRVE--------REKTTRSNEST------SIRVAVEKVDQLINLVGELVITQS 286 A AP REK + SIRV EKVDQ+INLVGELVITQS Sbjct: 248 VAVPAPAPVAAAPAPAPAAREKAKAAPAPAPAHGEGSIRVPTEKVDQIINLVGELVITQS 307 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 MLAQ +S LDPV L + MGQL+RNARDLQE+VMSIRMMPM+YVFSR+PRLVRDLA K Sbjct: 308 MLAQTASSLDPVLFDRLFSGMGQLERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDLASK 367 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGKQ++L G +TELDKSLIERIIDPLTHLVRNSLDHGIE P+KR+AAGK+ G LILS Sbjct: 368 LGKQIDLVTFGKATELDKSLIERIIDPLTHLVRNSLDHGIETPDKRVAAGKDPTGQLILS 427 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVT 466 A+H GGNI IEV+DDG GLNRERILAKA GL VSE ++D+EV LIFAPGFSTAE +T Sbjct: 428 AQHHGGNIVIEVSDDGGGLNRERILAKAIQNGLPVSETITDEEVWQLIFAPGFSTAEVIT 487 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 DVSGRGVGMDVVKRNIQ+MGGHV+I S+ G GTTIRI+LPLTLAILDGMSV+V +E FIL Sbjct: 488 DVSGRGVGMDVVKRNIQEMGGHVQISSRPGLGTTIRIVLPLTLAILDGMSVKVGEETFIL 547 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PLN VMESLQP+ D+H A +RV+ VRGEYLP++E+ +VFNVA A E TQGI VILQ Sbjct: 548 PLNCVMESLQPKAEDVHTAANSDRVMHVRGEYLPLLEMHRVFNVADALQEPTQGIAVILQ 607 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 + G+R+ALLVDQLIGQHQVV+KNLE+NYRKVP ISAATILGDGSVALIVDV ALQ Sbjct: 608 AEGKRFALLVDQLIGQHQVVLKNLETNYRKVPCISAATILGDGSVALIVDVGALQ 662 >UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae RepID=D0FQ58_ERWPY Length = 656 Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/652 (60%), Positives = 483/652 (74%), Gaps = 13/652 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++DF Q FF EA+ELL+DMEQHLL+L PD EQLNAIFRAAHS+KGGAGTFGFSVL Sbjct: 1 MDLNDFSQVFFSEAEELLSDMEQHLLLLDIARPDIEQLNAIFRAAHSLKGGAGTFGFSVL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 QETTHL+ENLLD+AR GE+QL+ D++NLFLE KDIMQ QL+AY+ QEPD SF YIC A Sbjct: 61 QETTHLLENLLDKARCGEIQLSRDMVNLFLEGKDIMQAQLEAYQSLQEPDEESFRYICAA 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L+Q+AL KGE V + + + + +S + LS +K E LL +EL +L Sbjct: 121 LQQIALSEKGELSQPVVQPATPSVTHA----PKSDGRLTVTLSGIKPQEQPLLLDELANL 176 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE-----TVEVSPKISTP-- 235 T+ + L + D+I AVLCFV++ QI + + P P Sbjct: 177 GTVISQRPVGSGIEVELETSVLGDEIGAVLCFVLDETQIDIRPSAAVSAPIEPDAVAPAQ 236 Query: 236 -PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 P + AAE + E K T ES SIRVAVEKVD +IN VGEL+ITQS+ +Q + + Sbjct: 237 IPAVSAAAEVIVNAKPEMAKRTTGTESGSIRVAVEKVDMIINQVGELIITQSIFSQLTEQ 296 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LDP +G L++S+ QL+RNAR+LQ+SVMSIRMMPM+YVFSR+PRLV DL +L K VELT Sbjct: 297 LDPAKYGMLLSSVAQLERNARELQQSVMSIRMMPMDYVFSRFPRLVHDLGARLNKDVELT 356 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 L+G + ELDKSLIERIIDPLTHLVRNSLDHGIE ++RL GK++ GNL LSAEH GGNI Sbjct: 357 LLGGAAELDKSLIERIIDPLTHLVRNSLDHGIEEKDERLRKGKSATGNLTLSAEHHGGNI 416 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 IEV DDGAGLNRE++LAKA S+G ++++ SDDEV MLIFA GFSTA VTDVSGRGVG Sbjct: 417 VIEVRDDGAGLNREKLLAKARSRGTQIADSASDDEVWMLIFAAGFSTATNVTDVSGRGVG 476 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV+RNI MGGHVE+ S + GTTIRILLPLTLAILDGMSV+V DE+++LPLN VMES Sbjct: 477 MDVVRRNILAMGGHVEVCSVKDQGTTIRILLPLTLAILDGMSVKVGDEIYVLPLNVVMES 536 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 L+P L+ G R+++VRGEYLP+ EL + F+V+G + + GI+VI+QSGG RYAL Sbjct: 537 LKPSADMLYQFVGQSRLVQVRGEYLPLTELRQAFDVSG-EAASEDGIIVIVQSGGCRYAL 595 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 VDQL+GQHQVVVKNLE NYRKVPGISAATILGDGSVALI+DV L +++ + Sbjct: 596 WVDQLVGQHQVVVKNLEHNYRKVPGISAATILGDGSVALILDVIELASLSHQ 647 >UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Proteobacteria RepID=A9AD35_BURM1 Length = 761 Score = 593 bits (1528), Expect = e-168, Method: Compositional matrix adjust. Identities = 293/394 (74%), Positives = 335/394 (85%), Gaps = 3/394 (0%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 E +SIRV VEKVDQLINLVGELVITQ+MLA+ +S DP H L M QL+RNARDLQE Sbjct: 362 EGSSIRVGVEKVDQLINLVGELVITQAMLAETASAFDPALHDRLFNGMAQLERNARDLQE 421 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 +VMSIRMMPM+YVFSR+PRLVRDLAGKLGKQVEL G +TELDKSLIERIIDPLTHLVR Sbjct: 422 AVMSIRMMPMDYVFSRFPRLVRDLAGKLGKQVELVTFGQATELDKSLIERIIDPLTHLVR 481 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NSLDHGIE +KR+AAGK++VG L+LSA H GGNI IEV+DDGAGLNRERILAKAA QG+ Sbjct: 482 NSLDHGIETVDKRIAAGKDAVGQLVLSAAHHGGNIVIEVSDDGAGLNRERILAKAAKQGM 541 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 + EN+SDDEV LIFAPGFSTAE VTDVSGRGVGMDVVKRNIQ MGGHVEI S+ G GT Sbjct: 542 QIPENISDDEVWQLIFAPGFSTAETVTDVSGRGVGMDVVKRNIQSMGGHVEISSQAGRGT 601 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 T RI+LPLTLAILDGMSV+V E+FILPLN VMESLQP D++ + GERV+ VRGEYL Sbjct: 602 TTRIVLPLTLAILDGMSVKVGSEIFILPLNFVMESLQPSNDDIYTVGNGERVVRVRGEYL 661 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+V L +VF+V GA+T+ TQGIV I+++ GRR+A+L+D+L+GQ QVVVKNLE+NYRKV G Sbjct: 662 PLVALHEVFSVEGARTDPTQGIVTIMETEGRRFAMLIDELVGQQQVVVKNLETNYRKVHG 721 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRMANTA 653 ISAATILGDGSVALIVDV+AL NRE R + A Sbjct: 722 ISAATILGDGSVALIVDVAAL---NRETRATHGA 752 Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 110/264 (41%), Positives = 145/264 (54%), Gaps = 43/264 (16%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L APDAE L AIFRAAHSIKGGA TFGFS Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVGAPDAEDLAAIFRAAHSIKGGAATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L +TTH++E+LLD AR E+ L ++++ FLETKD++ +QL Y+ S EPDAA+ IC Sbjct: 61 ALTDTTHILESLLDRARNHELTLTKEMVDAFLETKDVLSDQLADYRASAEPDAAAAAAIC 120 Query: 121 QALRQLALEAKG------------------------------ETPSAVTR---------- 140 L +L ++ G P V Sbjct: 121 AKLERLQADSGGAAASVAAPAAVAVAAPASAAPAVAPAADGQRAPDHVVEQAVAAAHPSA 180 Query: 141 -LSVVAKSEPQDE-QSRSQSPR-RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA 197 + +++ DE S P +I L+ + A + LL EELG+L + + D+L+ Sbjct: 181 AGAAAPQTDAADEGDSNGDGPHLKITLTGVDAKDQALLVEELGNLGRIVGRTEVGDALTL 240 Query: 198 ILPGDIAEDDITAVLCFVIEADQI 221 L D+ DDI AV CFVI+ QI Sbjct: 241 WLESDVPSDDIVAVCCFVIDESQI 264 >UniRef50_D1TKM6 Putative CheA signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKM6_9BURK Length = 779 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 292/397 (73%), Positives = 332/397 (83%), Gaps = 3/397 (0%) Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 S E +SIRV VEKVDQLINLVGELVITQ+MLA+ +S DP H L M QL+RNARDL Sbjct: 380 SGEGSSIRVGVEKVDQLINLVGELVITQAMLAETTSTFDPALHDRLFNGMAQLERNARDL 439 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QE+VMSIRMMPM+YVFSR+PRLVRDLA KLGK+VEL G +TELDKSLIERIIDPLTHL Sbjct: 440 QEAVMSIRMMPMDYVFSRFPRLVRDLAAKLGKEVELVTFGQATELDKSLIERIIDPLTHL 499 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRNSLDHGIE E R AAGK+S G L+LSA H GGNI IEV+DDGAGL R++ILAKA Q Sbjct: 500 VRNSLDHGIETVEARRAAGKDSTGQLVLSAAHHGGNIVIEVSDDGAGLRRDKILAKAVKQ 559 Query: 438 GLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 G+ VSE M+DDEV LIF PGFSTAEQVTDVSGRGVGMDVVKRNIQ MGGHVEI S G Sbjct: 560 GMQVSETMTDDEVWNLIFLPGFSTAEQVTDVSGRGVGMDVVKRNIQSMGGHVEITSHAGK 619 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 G+T RI+LPLTLAILDGMSV+V +E+FILPLN VMESLQP+ D++ +A GERV+ VRGE Sbjct: 620 GSTTRIVLPLTLAILDGMSVKVGNEIFILPLNFVMESLQPQAEDIYTVANGERVVRVRGE 679 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 YLP+V L +VFNV+ AK E TQGIV I+Q+ GRR+A+L+D+L+GQ QVVVKNLE+NYRKV Sbjct: 680 YLPLVALHEVFNVSEAKQEPTQGIVTIMQTEGRRFAMLIDELVGQQQVVVKNLETNYRKV 739 Query: 618 PGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 GISAATILGDGSVALIVDV+AL NRE R A+ A Sbjct: 740 HGISAATILGDGSVALIVDVAAL---NRETRHAHGHA 773 Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 113/269 (42%), Positives = 138/269 (51%), Gaps = 46/269 (17%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L PD E L AIFRAAHSIKGGA TFGF+ Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVARPDPEDLAAIFRAAHSIKGGAATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L ETTH++E+LLD AR E+ L D+I+ FLETKD++ QL Y+ S EPDA IC Sbjct: 61 ALTETTHILESLLDRARNNELVLRKDMIDTFLETKDVLSGQLADYRASAEPDAEVARAIC 120 Query: 121 QALRQLALEAK-----------------------------------GETPSAVTRLSVVA 145 L QL E++ G P V +V Sbjct: 121 AKLEQLHAESRMGGAPAAAAVETAPVAAQPTATQTTTPTTAVQQQGGTPPEHVVEQAVQM 180 Query: 146 KSEPQDEQ----------SRSQSPR-RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 E D + S P +I L + + +LL EELG+L + VK Sbjct: 181 AGEWMDGEPAQTGQAAGMDDSAGPHLKITLRGVGEKDQELLAEELGNLGNIVGQVKSGGD 240 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQITF 223 L L D+ DDI AV CFVI+ QIT Sbjct: 241 LMLWLSSDVPSDDIIAVCCFVIDESQITI 269 >UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Tax=Proteobacteria RepID=B9M712_GEOSF Length = 696 Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust. Identities = 325/675 (48%), Positives = 433/675 (64%), Gaps = 40/675 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S+D++ F QTFF+E E LA++E+ LL L PD E+LNA+FR+AH+IKG AG FGF Sbjct: 4 SIDMARFCQTFFEECSEHLAEIERILLSLDLNRPDEEELNALFRSAHTIKGSAGIFGFED 63 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + THL+E+LLD R EM L +++LFL+ KD + QL ++ + D + +C Sbjct: 64 MTSVTHLLESLLDRIRGHEMLLTASMVDLFLKAKDAIALQLAGHRDGERVDLQFIEEVCC 123 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR-----LKAGEVDLLE 176 +LR L + +PS L V + Q E + QS + S ++ +D L Sbjct: 124 SLRHLTEQDALPSPSTKGDLPAV---QAQTEDGKMQSTFELRFSPDTDLFMRGARLDYLF 180 Query: 177 EELGHLTTLTDVVKGADS--------------LSAILPGDIAEDDITAVLCFVIEADQIT 222 +ELG L LT AD+ L G + +I V FV + DQ+ Sbjct: 181 DELGELGELTAQAIIADAPPVEQLDPEHCHTRWQLWLAGTCNDMEIRDVFEFVADDDQLN 240 Query: 223 FETVEVS--------PKISTPPVLKLAAEQAPTGRVEREKT--------TRSNES-TSIR 265 V+ + P+ T + AAE P GR +K R E+ +SIR Sbjct: 241 IRRVQSAEIGNDRPEPQPVTASGSQTAAETQPFGRRAYDKDETAPGAFGRRGGEAESSIR 300 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 V V KVDQLIN VGELVITQ+ML Q +LDPV +L + QL+RN RDLQ+SVMSIR Sbjct: 301 VGVAKVDQLINQVGELVITQAMLDQMGRQLDPVLFQNLHQGLLQLERNTRDLQQSVMSIR 360 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 ++P+ VF+R+PRLVR+LA KLGKQVEL +VG +TELDK L+E+I DPLTHLVRN+LDH Sbjct: 361 LVPISIVFNRFPRLVRELAAKLGKQVELKMVGETTELDKGLVEKIADPLTHLVRNALDHA 420 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM 445 +E+PE R+AAGK G++IL A GG I I+V DDGAGLNRE+IL KA +G+ ++ M Sbjct: 421 LEVPELRIAAGKGPTGSVILQASQVGGRIVIDVIDDGAGLNREKILTKAVERGIATADTM 480 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 SD+EV LIFAPGFSTAE VTD+SGRGVGMDVV +N+Q +GG V IQS+QG GT + I L Sbjct: 481 SDEEVWQLIFAPGFSTAEAVTDISGRGVGMDVVLKNVQSLGGRVAIQSEQGKGTRVTISL 540 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLAILDG+SV V +E I+P+NA++ESLQP +L + G E V++VRGEY+PI+ L Sbjct: 541 PLTLAILDGLSVGVGNERLIVPINAIVESLQPTGENLKAINGNE-VVQVRGEYIPILRLH 599 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 ++FN+ A T+ GI++I++ G + A+LVD L + QVV+K++E NYRKV G S A I Sbjct: 600 RIFNLTDAVTDPRHGILMIIEVEGEKGAMLVDNLQDELQVVIKSMEENYRKVEGTSGAAI 659 Query: 626 LGDGSVALIVDVSAL 640 LGDG VALI+DV AL Sbjct: 660 LGDGRVALILDVGAL 674 >UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD8_LARHH Length = 670 Score = 557 bits (1435), Expect = e-157, Method: Compositional matrix adjust. Identities = 316/672 (47%), Positives = 411/672 (61%), Gaps = 49/672 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQP-EAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D+S F+ FFDEA E L +E+ LL QP + D E LNAIFRAAHSIKG AGTFGF Sbjct: 1 MSIDLSQFHAAFFDEAAEHLETIERLLLESQPGQTTDGEALNAIFRAAHSIKGSAGTFGF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + + TH +ENLLD RRGE+ L I++ L+++D++ +QL A++ Sbjct: 61 ADIAGFTHGLENLLDRIRRGELPLTAGRISVCLKSRDVIADQLAAHRDGATAVDPGRLAE 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 +A A + + P VT SR ++ + G + L++ L Sbjct: 121 IEAALLAAHDEGTDMPVPVT-------------SSRPDGGHYLLCWDRQLGHPEGLQDRL 167 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE------------ 227 L T+ + + L L ++ DI L F + Q E +E Sbjct: 168 AALGTVQPCGEQGEELVFQLQSGLSATDIAESLAFWLPPGQFRLEHLESQGDEAFGVFVD 227 Query: 228 -----------------------VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 P +T V AE A TG + TSI Sbjct: 228 TQRVVATSATEPAAPVDEGWGLFAPPAAATADVSPPVAEPAATGSTPALRQATPQPETSI 287 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV VEKVDQL+N +GELVITQSMLAQ+ L + +L M QL+R R+LQE+VMS+ Sbjct: 288 RVNVEKVDQLLNRIGELVITQSMLAQQVERLGTLASEELQRGMAQLERTTRELQEAVMSV 347 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF R+PRLVR+L KLGK VEL ++G TE+DKS +E++ DPLTHLVRNSLDH Sbjct: 348 RMLPVASVFGRFPRLVRELGQKLGKAVELQVIGEQTEIDKSFVEKLTDPLTHLVRNSLDH 407 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 G+E E R AGK VG L L A HQGG+I IEV+DDGAGL R+RILAKA QGL VS+ Sbjct: 408 GLESAEGRAGAGKPPVGRLTLRAFHQGGHIVIEVSDDGAGLQRDRILAKAREQGLNVSDT 467 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 M+D EV LIF PGFSTA+ VTDVSGRGVGMDVV+RNI+ MGG + I+S G GTTI + Sbjct: 468 MNDAEVWQLIFEPGFSTAQAVTDVSGRGVGMDVVRRNIEAMGGSIRIESLAGVGTTISLH 527 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LPLTLAILDGMS+ + +E++ILPL+ V+ESLQPR D+ LAG R+L VRGE LP++ L Sbjct: 528 LPLTLAILDGMSIAIGNEIYILPLSQVVESLQPRAEDVFTLAGQHRLLRVRGECLPLLAL 587 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 W++F++ EA +G+V+I+ +R ALLVD L+ Q Q VVKNLE+NYR+V G++AAT Sbjct: 588 WEIFDIQPRVREAHEGLVIIITVASQRVALLVDDLVSQQQFVVKNLETNYRRVRGLAAAT 647 Query: 625 ILGDGSVALIVD 636 ILGDG VA I+D Sbjct: 648 ILGDGQVAFILD 659 >UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G3I8_GEOUR Length = 707 Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust. Identities = 317/701 (45%), Positives = 428/701 (61%), Gaps = 57/701 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D+S F Q FF+E+ E L +ME+ LL L P++P + L+AIFRAAHSIKG AG FGF+ Sbjct: 5 ISNDLSRFNQVFFEESAEHLTEMERILLELDPDSPQEDDLHAIFRAAHSIKGSAGIFGFT 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E+LLD R E+ L+ +I+ FLE D + QL ++ D + +C Sbjct: 65 DMMIVTHDLESLLDRVRNHELTLSRTMIDAFLEAGDAIAMQLAGHRDGSAVDLPIIEEVC 124 Query: 121 QALRQL-------ALEA-----------KGETPSAVTRLS-VVAKSEPQDEQSRSQSPRR 161 + L A++A + PS V S +A E E + R Sbjct: 125 KKLEAFISGTSDAAVDAGSGLNLFSTLSDADAPSGVAAHSNSIAGYEIDFEPAEDTFKRG 184 Query: 162 IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA------ILPGDIAEDDITAVLCFV 215 + L L DL E ++ + D + IL E+++ + FV Sbjct: 185 VRLENLFYELADLGELQVSAAIDFASPLSELDPENCYTRWHLILETAAGENELRDIFEFV 244 Query: 216 IEADQITFE------TVEVSPKISTPP-------VLKLAAEQAPT-------GR--VERE 253 E +++ T +VS + P V+ +A P GR +R Sbjct: 245 AEENELKIRVISETGTAKVSDSTAEPGQEHRGNGVMAVAEAGVPMNTQASVPGRRAYDRN 304 Query: 254 KTT---------RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 +T S E +SIRV V KVDQLIN VGELVITQSM++Q SELDPV ++ Sbjct: 305 ETDAGAYGRRAGESAEGSSIRVGVAKVDQLINQVGELVITQSMMSQIVSELDPVLFENIH 364 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + QL+RN RD+QES+MSIR++P+ VFSR+PRLVRDL+ KLGK VEL G +TELDK Sbjct: 365 RGLMQLERNTRDMQESIMSIRLVPISLVFSRFPRLVRDLSAKLGKLVELKTFGETTELDK 424 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 LIE+I DPLTHLVRN LDH IELP R A GK++ G + + A GG I I+V DDGAG Sbjct: 425 GLIEKIADPLTHLVRNCLDHAIELPHVRKAGGKDATGTITMRAAQVGGRIVIDVADDGAG 484 Query: 425 LNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 LNR++IL KA +GL V E M D+EV LIFAPGFSTA+ VTD+SGRGVGMDVV++N+ Sbjct: 485 LNRDKILKKALERGLDVDETMPDEEVWHLIFAPGFSTADTVTDISGRGVGMDVVQKNVHA 544 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 MGG +++ S+QG G I LPLTLAILDG+SV V E FI+PLN+++ESLQP D+ Sbjct: 545 MGGRIQVASEQGKGCKFTISLPLTLAILDGLSVAVGKEKFIIPLNSIVESLQPLADDIKM 604 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 ++ G RV+ VRGEYLP++ L++VFN+ T+ +GI+V++ + G R AL+VD+LIG+HQ Sbjct: 605 IS-GRRVVHVRGEYLPLLPLYEVFNLETPITKPEEGILVLIDAEGERGALMVDELIGEHQ 663 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 VV+K+LE+NYRKV G + ATILGDG VALI+DV L + + Sbjct: 664 VVIKSLENNYRKVEGTAGATILGDGRVALILDVGGLLQVGK 704 >UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW65_METML Length = 769 Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust. Identities = 262/412 (63%), Positives = 326/412 (79%) Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E+ GR E +K S E++SIRV VEKVDQLINLVGELVITQ+M+ QR S LDPV + Sbjct: 344 ERKNLGRRESDKAPASAEASSIRVGVEKVDQLINLVGELVITQAMIEQRISMLDPVQNEA 403 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 LI S+GQL RN RDLQESVMSIRMMPM++VFSR+PR+VRDLA KL K+V+ VG++TEL Sbjct: 404 LINSVGQLTRNTRDLQESVMSIRMMPMDFVFSRFPRMVRDLAAKLNKKVDFVTVGATTEL 463 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK LIERI+DPLTHLVRNS+DHGIE+PE R GK+ G L LSA H+GG+I IEVTDDG Sbjct: 464 DKGLIERIVDPLTHLVRNSVDHGIEIPENRRKTGKSETGTLTLSAAHKGGSIVIEVTDDG 523 Query: 423 AGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 AGLNR++ILAKA S GL VSE+M+D EV LIFAPGFSTAE VTDVSGRGVGMDVVKRNI Sbjct: 524 AGLNRDKILAKAHSNGLAVSESMTDGEVFSLIFAPGFSTAEVVTDVSGRGVGMDVVKRNI 583 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 MGG V+I+S G GTTI I LPLTLAILDGMSV + + ++++PLN ++E+LQPR D+ Sbjct: 584 TSMGGTVDIRSALGFGTTISISLPLTLAILDGMSVSLGESIYVIPLNLIVETLQPRAEDI 643 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + G R++ VRGEYLPI+ L +FN A T+ T+G++V+L+S G++ AL VD+L+GQ Sbjct: 644 KTVTGEGRMVHVRGEYLPIIALHSLFNHATDITDPTEGVLVLLESDGKKSALFVDRLVGQ 703 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 QVV+K+LE+N++KV G+S ATI+GDGSVALI+DV+AL + + AA Sbjct: 704 QQVVIKSLETNFKKVLGVSGATIMGDGSVALILDVAALIQMGQNTNYITGAA 755 Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 91/251 (36%), Positives = 140/251 (55%), Gaps = 23/251 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FY+ FFDEA+ELLA+ E+ LL + + PD E+LNAIFRAAHSIKGGA TFGF Sbjct: 1 MTIDMSQFYEVFFDEAEELLAEAERLLLGINIDDPDNEELNAIFRAAHSIKGGAATFGFM 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L ++ ++ FL KD+++ +LD ++ + + D + Sbjct: 61 DMTEITHVLENLLDKIRKHEMALTSEHVDAFLAAKDVLKMELDGHRLATDVDQDQVADVK 120 Query: 121 QALRQLA--------------LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR 166 L+QL+ E P + VA + P D S I++ Sbjct: 121 MMLKQLSEADAASAPAPAPTPAPVVAEAPPVFQPVE-VASALPPD----GMSCFNIVMPD 175 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLSAI-LPGDIAEDDITAVLCFVIEADQ--ITF 223 + + + L+EELG L + V K AD I L D +E DI ++ F+++ D I+ Sbjct: 176 ITEKDAENLKEELGLLGDVA-VSKQADGHYVITLTTDSSEADIISICSFIVDPDDLVISL 234 Query: 224 ETVEVSPKIST 234 +T +P +T Sbjct: 235 KTNTATPSAAT 245 >UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadaceae RepID=B2SVD4_XANOP Length = 669 Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust. Identities = 306/672 (45%), Positives = 416/672 (61%), Gaps = 45/672 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F+ TFF+E+ E L ME LL L+ D E +N++FRAAHSIKGGA TFGF Sbjct: 1 MSMDLQRFHATFFEESREGLDAMEAGLLSLEEGNRDPEIINSVFRAAHSIKGGAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH++E LLDE R + QL + ++ L + D+++ L + D + + Sbjct: 61 AIAGLTHVLETLLDELRSNKRQLEPNAVDAMLGSVDVLRALLREAEHGTPADPTAVKAVH 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE--EE 178 L + GE P A +VVAK P++E+ + L D L E Sbjct: 121 TRLNAVL---AGEAPVA----AVVAK--PKEEEPEAWHIGFTPAPSLFMSGNDPLRIIRE 171 Query: 179 LGHLTTLTDVVK--------GADSLSAILP------GDIAEDDITAVLCFVIEADQITFE 224 L HL L + D L A L G I + I +V++ ++ Sbjct: 172 LEHLGPLQIAARLERMPGFENIDPLEAYLAWDLGLIGKIPRNKIEDTFAWVVDDCELDIR 231 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS----------------IRVAV 268 + V PP L + A A G + + E + IRV+V Sbjct: 232 PMAVP---GPPPSLAVDAPAAAPGAAVTAAPSAAAEPAAAAATPAKAAAAEAESSIRVSV 288 Query: 269 EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 +KVD LINLVGELVITQ+ML Q S+ LDP + L + L+RN RDLQE+V+ +RM+P Sbjct: 289 DKVDALINLVGELVITQAMLKQVSAGLDPAHAEQLFAGLDLLERNTRDLQEAVIGVRMLP 348 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 ++ VF R+PRLVRDL+ +LGKQV L +G STELDK LIE+I DPL HLVRNS+DHG+E+ Sbjct: 349 VDAVFRRFPRLVRDLSSRLGKQVRLRTIGESTELDKGLIEKIADPLVHLVRNSIDHGLEM 408 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDD 448 P+ R A+GK+ G + L+A HQGG+I IEV+DDG GLNR +IL KAA +G+ V +N +D Sbjct: 409 PDARRASGKDETGTITLAASHQGGHIVIEVSDDGRGLNRAKILEKAAERGIAVPDNPTDA 468 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 +V LIFAPGFSTA+ VTD+SGRGVGMDVV+RNIQ +GG V+++S G+GT + I LPLT Sbjct: 469 QVWDLIFAPGFSTADAVTDLSGRGVGMDVVRRNIQGLGGEVQLESNAGSGTRVLIRLPLT 528 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAILDGM+V VA E ILPL+ V+E+LQP D+ +AG RVL VRGEYLPI+ L + Sbjct: 529 LAILDGMTVSVAGETLILPLSYVLEALQPAAEDIRSMAGDGRVLRVRGEYLPILSLTNYY 588 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 G ++ + + +VV+++ G++ AL VD+L+GQ QVVVKN+E+NYR++PG+S ATILGD Sbjct: 589 GFGGQQS-SQESLVVVVEGDGQKIALEVDELLGQQQVVVKNIENNYRRIPGVSGATILGD 647 Query: 629 GSVALIVDVSAL 640 G V+LIVD+ L Sbjct: 648 GRVSLIVDIGGL 659 >UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBY4_METSD Length = 799 Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust. Identities = 250/381 (65%), Positives = 309/381 (81%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 E+TSIRV VEKVDQLINLVGELVITQ+ML +R S+LDPV H DL+ S+GQL RN RDLQE Sbjct: 405 ETTSIRVGVEKVDQLINLVGELVITQAMLEERISKLDPVTHEDLLNSLGQLTRNTRDLQE 464 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVMSIRMMPM+YVFSR+PR+VRDLA +LGK+VE G++TELDK LIERI+DPLTHLVR Sbjct: 465 SVMSIRMMPMDYVFSRFPRMVRDLATRLGKKVEFVTSGAATELDKGLIERIVDPLTHLVR 524 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGIE+P+ R +GKN G L LSA ++GGNI IEVTDDGAGLNRERIL+KA GL Sbjct: 525 NSIDHGIEVPDVRHKSGKNETGRLSLSASNRGGNIVIEVTDDGAGLNRERILSKAKQSGL 584 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 VS+ M D +V LIFAPGFSTAEQVTDVSGRGVGMDVVKRN+ MGG ++I+S G GT Sbjct: 585 PVSDTMPDSDVWQLIFAPGFSTAEQVTDVSGRGVGMDVVKRNVSAMGGVIDIRSALGYGT 644 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 T+ I LPLTLAILDGMSV + D ++++PLN ++E++QP+ D+ + G ++ VRGEYL Sbjct: 645 TMSISLPLTLAILDGMSVSLGDNMYVVPLNLIVETMQPQATDIKTVTGAGFMVHVRGEYL 704 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 PI+ L+ +FN T G++VI+++ G++ AL VD L+GQ QVV+K+LE+NYRKVPG Sbjct: 705 PIIPLYSLFNQPTQITNPVDGVLVIIEAEGKKAALFVDGLVGQQQVVIKSLETNYRKVPG 764 Query: 620 ISAATILGDGSVALIVDVSAL 640 IS ATI+GDGSVALI+DV + Sbjct: 765 ISGATIMGDGSVALILDVPTI 785 Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/127 (49%), Positives = 89/127 (70%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FFDEA+ELLA+ E LL L + PD+E LNAIFRAAHSIKGGA TFG + Sbjct: 1 MSIDMSQFYQAFFDEAEELLAEAEHLLLALDLDNPDSEDLNAIFRAAHSIKGGAATFGMT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L + ++ FLE KD++ QL+ ++ + D + + Sbjct: 61 DMAEITHVLENLLDKIRKNEMALTGEHVDTFLEAKDVLNSQLEGHRSGADVDRDVQEEVK 120 Query: 121 QALRQLA 127 + L+ L+ Sbjct: 121 RKLKALS 127 >UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCZ2_9PROT Length = 728 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 249/382 (65%), Positives = 309/382 (80%) Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 +E++SIRV++EKVDQ+INLVGELVITQ+MLAQ +S+ DPV L + M QL+RN RDLQ Sbjct: 338 SETSSIRVSIEKVDQMINLVGELVITQAMLAQTASQYDPVLFEKLYSGMSQLERNTRDLQ 397 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 ESVMSIRMMP+ +VFSRYPR+VRDLA KL K+VEL VG +TELDK LIE+I DPLTHLV Sbjct: 398 ESVMSIRMMPISFVFSRYPRVVRDLAAKLNKRVELRTVGENTELDKGLIEKIADPLTHLV 457 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RNSLDHG+E+ EKR+AAGK + G + L A HQGG+I IEV+DDGAGLNR +ILAKA +G Sbjct: 458 RNSLDHGVEVAEKRIAAGKPAQGTITLRAFHQGGSIVIEVSDDGAGLNRGKILAKAKERG 517 Query: 439 LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 L V + M+D EV +LIF GFSTA+QVTDVSGRGVGMDVVKRNIQ MGG ++I+S G+G Sbjct: 518 LPVHDAMTDQEVWLLIFEAGFSTADQVTDVSGRGVGMDVVKRNIQSMGGRIDIESTLGSG 577 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 T I I LPLTLAILDG+SV V D++FI+PLN + ESLQP D+ ++G RV++VRGEY Sbjct: 578 TRISIRLPLTLAILDGLSVVVGDQMFIVPLNYITESLQPAATDIKTVSGQGRVVQVRGEY 637 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP++ L + FN+ TE +GI+VIL++ G + AL VD L+GQHQVV+K+LESNYR+V Sbjct: 638 LPVIALHEFFNLRPNVTEIHKGILVILEAEGHKAALFVDDLVGQHQVVIKSLESNYRRVQ 697 Query: 619 GISAATILGDGSVALIVDVSAL 640 G S ATI+GDG VALI+D +AL Sbjct: 698 GASGATIMGDGKVALILDAAAL 719 Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 61/127 (48%), Positives = 91/127 (71%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+ FY+ FF+E+ ELLADME LL L +PD E LNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSTDLEQFYEIFFEESSELLADMEACLLRLDVNSPDLEDLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+GE+++ +++++ FL+ D+++ QL ++ + D + IC Sbjct: 61 DMTEMTHMLETLLDRLRKGELEVRSEMVDAFLKAGDVIKAQLAGHRGEGQADPTVAEAIC 120 Query: 121 QALRQLA 127 + L++L+ Sbjct: 121 EELKRLS 127 >UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=22 Tax=Proteobacteria RepID=Q47I49_DECAR Length = 784 Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust. Identities = 245/384 (63%), Positives = 306/384 (79%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 +SIRV++EKVDQLINLVGELVITQ+ML Q ++++ L+ + QL+RN RDLQESV Sbjct: 394 SSIRVSIEKVDQLINLVGELVITQAMLLQTATQMQESAPERLVNGLAQLERNTRDLQESV 453 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MSIRMMP+ +VFSR+PR+VRDL+GKLGKQVEL G +TELDKSLIERI DPLTHL+RNS Sbjct: 454 MSIRMMPISFVFSRFPRVVRDLSGKLGKQVELKTSGETTELDKSLIERIADPLTHLIRNS 513 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 LDHGIELPE R+AAGK+ +G + L A HQGGNI IEV DDGAGL R +ILAKA +G V Sbjct: 514 LDHGIELPENRIAAGKSPIGTITLKAYHQGGNIVIEVGDDGAGLPRNKILAKARERGFQV 573 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 S+ M+D EV LIF GFSTAEQVTDVSGRGVGMDVV+RNIQ MGG VEI+S G GT + Sbjct: 574 SDQMTDSEVFNLIFEAGFSTAEQVTDVSGRGVGMDVVRRNIQSMGGRVEIESMLGVGTRM 633 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 + LPLTLAILDGMS+ + D+ +ILPL+ V+ES QPR D+ L+ RV++VRGEYLP+ Sbjct: 634 TVRLPLTLAILDGMSIALGDQTYILPLSYVIESFQPRMGDIKTLSNQARVIQVRGEYLPV 693 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 V L ++FN+ + + TQGI+V++ + G + AL VD L+GQHQVV+K+LE+NYR+V GIS Sbjct: 694 VVLHELFNIKPSANDFTQGIMVVIDADGVKAALFVDALVGQHQVVIKSLEANYRRVQGIS 753 Query: 622 AATILGDGSVALIVDVSALQAINR 645 ATI+GDG VALI+DVSA+ + + Sbjct: 754 GATIMGDGHVALILDVSAIAGMAK 777 Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 69/130 (53%), Positives = 92/130 (70%), Gaps = 1/130 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FYQ FFDE+ E LA ME LL L + PD+EQLNAIFRAAHSIKG AGTFGF+ Sbjct: 1 MAIDMSQFYQVFFDESAEHLAAMEGLLLDLDIDNPDSEQLNAIFRAAHSIKGSAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP-DAASFDYI 119 L ETTH++ENLLD R+ E+ L D+++ FLE D+++ L+A++ E D S I Sbjct: 61 DLAETTHILENLLDRIRKQELGLRADMVDAFLECGDLLRGMLEAHQGRGEAVDPQSVASI 120 Query: 120 CQALRQLALE 129 C LR+L+ + Sbjct: 121 CARLRELSTD 130 >UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Tax=Burkholderiales RepID=A9BRE0_DELAS Length = 732 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 247/395 (62%), Positives = 306/395 (77%) Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 P + + ESTSIRV+V KVDQLINLVGELVITQ+MLAQ S LD + L+ Sbjct: 332 PAAKTAAQTQQAQMESTSIRVSVAKVDQLINLVGELVITQAMLAQNSHGLDASAYQQLLA 391 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + L RN RDLQESVMSIRM+PM VFSR+PR++RDLAGKLGK+++L +G +TELDK Sbjct: 392 GLADLDRNTRDLQESVMSIRMIPMSTVFSRFPRMLRDLAGKLGKKIDLITLGEATELDKG 451 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 L+E+I DPLTHLVRNS+DHGIE+PE RLAAGK+ G L L+A HQGG+I IEV DDG G+ Sbjct: 452 LVEKITDPLTHLVRNSVDHGIEMPEDRLAAGKSEHGTLTLAASHQGGSIVIEVRDDGRGM 511 Query: 426 NRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 NRERIL KA +G+ VS+NM D EV LIFAPGFSTA+ VTDVSGRGVGMDVVKRNI + Sbjct: 512 NRERILQKARERGMDVSDNMPDQEVWQLIFAPGFSTADVVTDVSGRGVGMDVVKRNIAAL 571 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 GG VEI+S QG G + + LPLTLAI+DGMSV V+DEV+ILPL++V+ES + D++ + Sbjct: 572 GGSVEIESTQGKGMRVAVRLPLTLAIMDGMSVGVSDEVYILPLSSVVESFLVKAEDVNTV 631 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 A G ++++VR EY+P+ L K F V + T + I+V+++S G R ALLVD+L+GQHQV Sbjct: 632 ANGTQLVKVRDEYMPVFALEKTFRVPRSDTSQSSNIMVVVESDGSRVALLVDELLGQHQV 691 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VVKNLESNYRKVP +S ATILGDG+VALI+D AL Sbjct: 692 VVKNLESNYRKVPNVSGATILGDGTVALILDTGAL 726 Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 56/125 (44%), Positives = 76/125 (60%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGF+ + Sbjct: 15 FDLSQFYQIFFEEAAENLDQMEQMLLNLDLSAANDEELNGIFRCAHSIKGGAATFGFADV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E +A S + Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQAGNEGEALSTTDLVAR 134 Query: 123 LRQLA 127 + LA Sbjct: 135 IETLA 139 >UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Tax=Comamonadaceae RepID=D0IYI5_COMTE Length = 734 Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust. Identities = 243/381 (63%), Positives = 303/381 (79%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 ESTSIRV V+KVDQLINLVGELVITQ+MLAQ S LDP + L+ + L RN RDLQE Sbjct: 348 ESTSIRVDVKKVDQLINLVGELVITQAMLAQNSQGLDPTTYQQLLAGLADLDRNTRDLQE 407 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVMSIRM+PM VFSR+PR++RDLAGKLGK+++L +G +TELDK L+E+I DPLTHLVR Sbjct: 408 SVMSIRMIPMSTVFSRFPRMLRDLAGKLGKKIDLVTLGEATELDKGLVEKITDPLTHLVR 467 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGIE+PE R+AAGK+ G L L+A HQGG+I IEV DDG G+NRERIL KA +G+ Sbjct: 468 NSVDHGIEMPEDRIAAGKSEHGTLTLAASHQGGSIVIEVRDDGKGMNRERILNKARERGM 527 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 VS++M D +V LIFAPGFSTA+ VTDVSGRGVGMDVVKRNI +GG VEI+S G G Sbjct: 528 DVSDSMPDSDVWQLIFAPGFSTADVVTDVSGRGVGMDVVKRNITSLGGTVEIESVAGVGM 587 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 + + LPLTLAI+DGMSV V +EV+ILPL++V+ES Q + D++ +A G ++++VR EY+ Sbjct: 588 KVAVRLPLTLAIMDGMSVGVGEEVYILPLSSVVESFQVKADDVNTVANGTQLVKVRDEYM 647 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P++ L + F V A T I+V++++ G R ALLVD+L+GQHQVVVKNLESNYRKVP Sbjct: 648 PVIALERTFQVPRADESQTSNIMVVVEAEGSRVALLVDELLGQHQVVVKNLESNYRKVPN 707 Query: 620 ISAATILGDGSVALIVDVSAL 640 +S ATILGDGSVALI+D AL Sbjct: 708 VSGATILGDGSVALILDTGAL 728 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/113 (47%), Positives = 71/113 (62%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGFS + Sbjct: 15 FDLSQFYQIFFEEASENLDQMEQMLLSLDLSAANDEELNGIFRCAHSIKGGAATFGFSDV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E + S Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQSGDEGEPVS 127 >UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 Tax=Gammaproteobacteria RepID=A1WZ19_HALHL Length = 703 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 289/693 (41%), Positives = 402/693 (58%), Gaps = 50/693 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F QTFF+E+ E L ME LL L PE+PD E LN +FRAAHSIKGGAGTFG S Sbjct: 1 MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH ME LLD R G+ + D +N+ L D ++ L A + Q DA D I Sbjct: 61 AVSDFTHRMETLLDRLRDGKQAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDA---DAIS 117 Query: 121 QALRQLALEAKGETP-----------------------------SAVTRLSVVAKSEPQD 151 A ++L E G+ P + + EPQ Sbjct: 118 TAQQRLD-EQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRGGGGGGGWLIRFEPQP 176 Query: 152 EQ-SRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP--GDIAEDDI 208 + PRR+ L+ GE+++ E + L + L+ L D+ E + Sbjct: 177 HLFATGNDPRRLFLALQDLGELEV-ECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAV 235 Query: 209 TAVLCFVIEADQITFE------TVEVSPKISTPPVLKLAAEQAPTG------RVEREKTT 256 V +V + ++ + T EV+P P + + E P + Sbjct: 236 REVFEWVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAAR 295 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 R ++SIRV EK+D LI++VGELVITQSML+Q E +L + QL+RN R+ Sbjct: 296 RGGGNSSIRVDTEKIDALIDMVGELVITQSMLSQVGKEFTAERLEELQDGLAQLERNTRE 355 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE+VM IRM+P+ + +SR PR+V D + LGK V+ + G TELDK+++E+IIDPL H Sbjct: 356 LQENVMRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTELDKTVMEKIIDPLVH 415 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRNS+DHGIE PE+R AAGK G + + A H+GGNI IE+ DDG G+NR+++LAKA S Sbjct: 416 LVRNSVDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARS 475 Query: 437 QGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 GL + DD+V LIF PG ST EQ T+ SGRGVGMDVVKRN++ + G++ ++S Q Sbjct: 476 SGLLEDGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQ 535 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G GTTI I LPLTL+ILDG RV D+ +I+PL +V+ESLQ + L + G V R Sbjct: 536 GQGTTITISLPLTLSILDGQLFRVGDQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWR 595 Query: 556 GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 Y+PIV L ++F+ + E G++VI++ + VD L+ Q QVV+K+LE+NY Sbjct: 596 EGYVPIVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLDQQQVVIKSLEANYL 655 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQR 648 +VPGI+ ATILGDG+VALI+D++ L ++R R Sbjct: 656 QVPGIAGATILGDGTVALILDIAGLIEMSRGGR 688 >UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPQ9_HAHCH Length = 695 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 290/704 (41%), Positives = 411/704 (58%), Gaps = 60/704 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+S F+ FF+E+ E + +E LL + +APD E +N IFRAAHSIKGG+ TFGFS Sbjct: 1 MSMDLSRFHDVFFEESFEAVNTIEASLLEVDLDAPDPESINIIFRAAHSIKGGSATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ----------- 109 + TH+MENLLDE R G+ +L I+++ LE+ D M+ L + K S+ Sbjct: 61 QVAAYTHVMENLLDEVRAGKRRLTQPIVDVLLESVDAMRLLLSSAKASENIPEEEFTQHK 120 Query: 110 -EPDAASFDYICQALRQLALEAKGETPSA--------VTRLSVVAKSEPQDEQ-SRSQSP 159 + +A S D A G P+A V+ VV P E R P Sbjct: 121 SKLEAISQDQASLTTSNAAFTDSGAAPAAESFDADDGVSGWRVVFT--PHKEMMQRGNDP 178 Query: 160 RRII--LSRLKAG----EVDLLE-EELGHLTTLTDVVKGADSLSAILPGDIAE-DDITAV 211 R+ ++ L G E DL + H L + L P D A+ DD Sbjct: 179 LRLAREVAALAEGDAEIECDLSALPDWEHFEPLNSYLGWTVRLRR--PVDKAQIDD---- 232 Query: 212 LCFVIEADQITFETVEVSPKISTPPVLK----LAAEQAPTGR------------VEREKT 255 F D+ V + PK + P + LA AP ++ K Sbjct: 233 -AFAWVEDECDMAIVPI-PKAQSAPSQQAMETLAEPSAPVDEQAQASDKGASPAAKQNKP 290 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 ES SIRV +EKVD LIN+VGELVITQSML S + L+ + QL+R R Sbjct: 291 AMVAESQSIRVDLEKVDALINMVGELVITQSMLNMLSEDEALQGMEKLLQGLTQLKRQTR 350 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 LQE VM IRM+P+ + F+R+PR+VRDL+ +LGK +EL L G +TE+DK++IE+I DPL Sbjct: 351 ALQEGVMQIRMLPISFCFNRFPRMVRDLSRQLGKDIELMLSGENTEVDKTVIEKITDPLV 410 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRNS+DHGIE P R A GK G++ L A HQ GNI IEV DDG GL+ + +L+KA Sbjct: 411 HLVRNSVDHGIESPADRTAKGKPEHGSVYLRAYHQVGNIVIEVEDDGKGLDPQVLLSKAK 470 Query: 436 SQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +GL + +S+ ++ LIF PGFST E+ +D+SGRGVGMDVVKRN+Q +GG ++++S+ Sbjct: 471 RKGLIAGDAILSEAQIFELIFLPGFSTKEEASDLSGRGVGMDVVKRNVQSLGGSIQVESE 530 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 T I LPLTLAI+DG + + +E++++PL ++ESLQP + ++ +AG +++ Sbjct: 531 LNRRTRFTIRLPLTLAIMDGQLISLGEELYVIPLVTIIESLQPDPSMINRVAGTHETIKL 590 Query: 555 RGEYLPIVELWKVFNVAGAKTEA----TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 RG YLP++ L + + A +++ T GI+VI++ RR+ L VD+L+ Q Q+V+K+L Sbjct: 591 RGAYLPVLRLSEALDAAQNESKKSKPLTDGIIVIVEHESRRFGLFVDELLSQQQIVIKSL 650 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 E NYR +PG+SAATILGDG VALI+DVS L + ++ ++ A Sbjct: 651 EENYRMIPGVSAATILGDGRVALILDVSGLSQLQKDSEVSYADA 694 >UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S733_CHRVI Length = 797 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 239/419 (57%), Positives = 306/419 (73%), Gaps = 4/419 (0%) Query: 227 EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 + S IST + E +R TT S SIRV+VEKVDQLINLVGELVIT + Sbjct: 379 DASAPISTAASPAMERESRAGNAPKRPATTDS----SIRVSVEKVDQLINLVGELVITHA 434 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 MLA ++ LDPV H ++ + L+RN+RDLQE+VMSIRMMP+ +VF+R+PR+VRD A Sbjct: 435 MLADSAAGLDPVVHERIMAGLSNLERNSRDLQEAVMSIRMMPISFVFNRFPRVVRDTAAS 494 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGK+V L L+G TELDK LIER+ DPL HLVRNS+DHGIE PE RLAAGK G ++L Sbjct: 495 LGKRVTLKLIGEDTELDKGLIERLADPLNHLVRNSIDHGIERPEARLAAGKPETGEIVLR 554 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVT 466 A H+GG++ +EV+DDGAGL RE++LAKAA QG+ + +N SD +V LIF GFSTAE+VT Sbjct: 555 ASHRGGSVVVEVSDDGAGLKREKLLAKAAKQGIPMPDNPSDKDVWQLIFHAGFSTAERVT 614 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 D+SGRGVGMDVV+RNI+ M G VE+ S G GT I I LPLTLAILDG+SVR+ +E+FIL Sbjct: 615 DISGRGVGMDVVRRNIEDMNGRVEVDSTAGRGTHITIRLPLTLAILDGLSVRMGEEMFIL 674 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL + ES+QPR + G RV+++ EYLP+V L VF+ + GI+VI++ Sbjct: 675 PLTVIQESIQPRAEQFKTVVGKGRVVQINDEYLPLVSLHDVFSSGRPEPNLLDGILVIVE 734 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + R A+LVD+L+ QHQVV+K+LE+NYRKV G+S ATI+GDG VALI+DV AL +NR Sbjct: 735 TNEGRAAVLVDELVAQHQVVIKSLETNYRKVEGVSGATIMGDGRVALILDVDALVRLNR 793 Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/236 (38%), Positives = 128/236 (54%), Gaps = 15/236 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FF+EA E LA ME LL L EAPD E LNAIFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDMSQFYQVFFEEAGENLAAMESLLLELDVEAPDLETLNAIFRAAHSIKGGAGTFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+ E+ ++++ FL+ D+++ QL A+++ +E + + +C Sbjct: 61 DMAEVTHILETLLDRLRKQELAPTVEMVDAFLQAGDVLKSQLQAHQEGEEYEDSRVTEVC 120 Query: 121 QALRQLAL--EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG-------E 171 Q L +LA +A+G+ P+ S + P S L+ AG E Sbjct: 121 QHLERLARADDAEGDVPA-----SSAGEIRPTGTVEAESSVTHWRLAFEPAGIGQGTPDE 175 Query: 172 VDLLEEELGHLTTLTDVVKG-ADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 L E LG L + D+ G + L I +L F+ E Q+ +T+ Sbjct: 176 RRALFEALGELGRIQDIGAGETERCLWQLTSAAGRGAIEEILAFICEPGQVEIDTI 231 >UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Moritella sp. PE36 RepID=A6F9B4_9GAMM Length = 682 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 274/672 (40%), Positives = 399/672 (59%), Gaps = 46/672 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+ F+Q F +E E L ME LL L P + D+E +N IFR AHSIKGGAGTFGF Sbjct: 1 MDIDLKQFHQVFIEECLEGLEVMEAELLKLNPGSVDSEVINTIFRVAHSIKGGAGTFGFH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAA---- 114 L TH+ E LLD+ R ++ L INLFL+T D ++ + E PDAA Sbjct: 61 QLTAFTHVAETLLDDLRAEKLTLIDGHINLFLQTVDCLRAWIQLLADDSESIPDAAESLK 120 Query: 115 -SFDYICQALRQLALEAKGETPSAVTRL--------SVVAKSEPQDEQSRSQSPRRIILS 165 ++ Q L + G+ P A + ++ QD + PR I Sbjct: 121 QQYNQFLQLDVNQDLSSTGDEPLAKPPVMKGLDDGDWLIHFVPGQDILKQGNEPRLIFAE 180 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI--TF 223 GE+ ++ + D + ++LS P DI ++ V EA QI F Sbjct: 181 LQDMGELKVMPK--------FDNIPSWNNLS---PEDIYVTWDLELISQVSEA-QIKEAF 228 Query: 224 ETVE-------VSPKISTPPVL--------KLAAEQAPTGRVEREKT-TRSNESTSIRVA 267 E VE +P T + K+ AE P+ + T T+S E+ SIRV+ Sbjct: 229 EWVEDESTIIITTPSTRTQSIASETLATDNKMLAESKPSPVTTNKITKTKSPETNSIRVS 288 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 ++KVD LIN+VGELVITQ+ML + + +L + QL ++ R++Q+SVM IRM+ Sbjct: 289 IDKVDALINMVGELVITQAMLEELGQDFSVEKLPELKKGLTQLSQHTREMQDSVMKIRML 348 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+++ F+R PR+VRDL+ +LGK V L + G TELDK ++E++ DP+ HLVRN+LDHGIE Sbjct: 349 PIQFAFNRIPRMVRDLSAQLGKNVVLRIHGEETELDKIMLEKLSDPIVHLVRNALDHGIE 408 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL-TVSENMS 446 E+R AGK+ V L ++A HQGG I +E+ DDG GLNR++I AKA +G+ + S Sbjct: 409 TIEERKLAGKSDVAYLDINAFHQGGEIIVEIRDDGRGLNRDKIHAKAIEKGIANKDQRYS 468 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 D+++ IF+PGFST E V+D+SGRGVGMDVVKRNI+ +GG ++I+S G G+ I LP Sbjct: 469 DNQIDEFIFSPGFSTVETVSDISGRGVGMDVVKRNIESLGGDIKIESTTGEGSCFSIRLP 528 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LTL+I+DG V++ + +ILP+ +++ESLQ ++ + LA V ++R E++ I+ L+K Sbjct: 529 LTLSIMDGQLVKIGSKTYILPIMSIIESLQLKDGMVTKLADDTEVFKLRDEFISIIRLYK 588 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 V N T G++V+++ G ++Y LLVD L Q QVV+KNLE N+ KV +S ATIL Sbjct: 589 VLNHKTNLKCITDGLLVVVECGNQKYGLLVDDLAAQQQVVIKNLEENFMKVSCVSGATIL 648 Query: 627 GDGSVALIVDVS 638 G+G+VALI+D++ Sbjct: 649 GNGTVALILDIA 660 >UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium RepID=A5EDT5_BRASB Length = 684 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 282/654 (43%), Positives = 400/654 (61%), Gaps = 21/654 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +T+F+E ELL ++ +L +L D E L+AIFR+ HSIKGGAG FG + L Sbjct: 12 VAQFRKTYFEECAELLDALQSNLELLSSGQEDDETLHAIFRSVHSIKGGAGAFGCTDLVA 71 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H E+LLD R ++ + DI L L D + + ++A + Q+ A SF + Sbjct: 72 FSHTFESLLDALRDHKIAVTNDIKQLLLRASDALADIVNAARLEQQL-APSFAVDIRTAM 130 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 Q L+ G + + ++P EQ+ R KA E LL +L L Sbjct: 131 QHVLQGAGPA-AEPGPAPAASDAKPLHEQTYRIRFRPHTEMLKKANEPLLLIRQLRKLGA 189 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVL--CFVIEAD------QITFETVE--VSPKIST 234 L D + LP A D A F +E Q FE VE +I Sbjct: 190 L-----AIDVDCSALPALGALDPEAAYFNWTFTLETAVPRSGIQDVFEFVEDDCDLQIEL 244 Query: 235 PPVLKLAAEQAP--TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 A E AP G + + SIRV V+KVD+L+NLVGELVI+Q+ML ++ Sbjct: 245 LESATAAVEVAPGDAGSAAAPVVAAVSLAQSIRVDVDKVDRLVNLVGELVISQAMLTEQG 304 Query: 293 SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 L + LI + L ++AR+LQESVM+IR P++ VF+R PR+VR+LA LGK+V Sbjct: 305 LALPADKYPQLIQGIEALAQSARELQESVMAIRAQPVKSVFARMPRIVRELAAVLGKEVR 364 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 + G TE+DK++IE++ DPLTH++RN+LDHGIE P +RLAAGK G + LSA + G Sbjct: 365 IVTSGEMTEIDKTVIEQLNDPLTHMIRNALDHGIEPPAERLAAGKPRQGTINLSAAQRSG 424 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 I IEV+DDG G+NR+++LAKA ++GL N+SDD++ LIF P FSTAE ++++SGR Sbjct: 425 RIVIEVSDDGRGINRDKVLAKARARGLVPAGANLSDDDIDNLIFLPAFSTAEVISNISGR 484 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVVKRN+Q +GG + ++S+ G G++ + LPLTLA++DGM V V E FI+PL A+ Sbjct: 485 GVGMDVVKRNVQALGGRISVRSRFGHGSSFTLSLPLTLAVVDGMVVSVGRETFIIPLVAI 544 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGR 590 +E+L+P AD+HP+ G VL +RGEYLP+V L +VF++ A + +GIV+I+QS Sbjct: 545 VENLRPLPADIHPVVGRGHVLALRGEYLPLVYLHRVFSIGDAIGDPCRGIVIIVQSESAG 604 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 R ++VD+L+GQ QVVVK+LE+NY V GIS ATILG+G VALI+DV+ L I+ Sbjct: 605 RVGIVVDELLGQQQVVVKSLEANYEPVDGISGATILGNGRVALILDVARLHEID 658 >UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3LX06_VIBCM Length = 720 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 281/705 (39%), Positives = 408/705 (57%), Gaps = 64/705 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E LD R + QL ++ L++ D+++ LD+ +Q D A + Sbjct: 61 EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120 Query: 121 QALRQLALE-------AKGETPSAVTRLS-------VVAKSEPQDEQSR----------S 156 L+ L + ++ + S+ T S + + Q + R Sbjct: 121 AELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSG 180 Query: 157 QSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCF 214 P RI+ + G +E + L L ++ LS L GD++E+D+ + + Sbjct: 181 NDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDW 240 Query: 215 V----------IEADQITFE----------TVEVSPKISTPPV--LKLAAEQAPTGRVE- 251 V I +D+ + T++ +P+ PV + L A + P V Sbjct: 241 VEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAP 300 Query: 252 -----REKTTRSNEST-----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 +E T T SIRV +EKVD LINLVGELVITQSML + ++ Sbjct: 301 VIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLD 360 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L + G TE Sbjct: 361 KLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTE 420 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK G + L A HQGG+I +E++DD Sbjct: 421 LDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDD 480 Query: 422 GAGLNRERILAKAASQGL----TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 GAG++ +++ KA +G+ T +++D ++ LIFAPGFSTAEQV+D+SGRGVGMDV Sbjct: 481 GAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDV 540 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+RNI+++GG +E+ S+ G G+ I LPLTLAILDG V+VAD+V+++PL ++ES+Q Sbjct: 541 VRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQI 600 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 A + AGG + +R E +PI+ L + G + ++ ++S G R LLVD Sbjct: 601 NTASVKHAAGGIELYRLREENIPILRLQDELAM-GRSGSLEKRLICFVESAGHRVGLLVD 659 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+ L A Sbjct: 660 DLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIA 704 >UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomonas aeruginosa RepID=A3LGZ6_PSEAE Length = 539 Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust. Identities = 231/383 (60%), Positives = 290/383 (75%), Gaps = 1/383 (0%) Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 ES SIRV+VEK+D LINLVGELVITQ+ML Q +LDP H L ++ QL+ N RDLQ Sbjct: 143 GESGSIRVSVEKIDSLINLVGELVITQAMLGQLGEQLDPSRHERLQHALAQLEHNTRDLQ 202 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 ESVMSIRM+P+ ++FSR+PRLVRD A +LGKQVEL L G TELDKS+IE++ DPLTH+V Sbjct: 203 ESVMSIRMLPINFIFSRFPRLVRDTATRLGKQVELHLHGEHTELDKSVIEKLSDPLTHIV 262 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RNS+DHGIE P +RLAAGK + G + L+A HQGG++ +EV+DDG GL+R RILAKA + Sbjct: 263 RNSIDHGIETPAERLAAGKPASGTVKLAASHQGGSVVVEVSDDGRGLSRPRILAKARERN 322 Query: 439 LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 L V + MSD EV L+F PGFSTAE VT++SGRGVGMDVVKRNI MGG ++I S G G Sbjct: 323 LPVHDGMSDAEVWQLVFMPGFSTAETVTELSGRGVGMDVVKRNIGAMGGRIDIDSAPGMG 382 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER-VLEVRGE 557 T I I LPLTLAILDG+ V V +++PL ++ESLQ R D+ L G + ++ VRGE Sbjct: 383 TRIGIRLPLTLAILDGLIVAVEAVNYVIPLTYIVESLQARSDDVRGLGGEDNAMIRVRGE 442 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 YLP+ L ++ + G QGIVVIL+S GR +AL VD+L+GQ QVV+K+LE N+R+V Sbjct: 443 YLPLFSLHELLRIGGEAPAPEQGIVVILESEGRSFALQVDELVGQQQVVIKSLEQNFRRV 502 Query: 618 PGISAATILGDGSVALIVDVSAL 640 GI+ ATI+GDGSVALI+DV AL Sbjct: 503 EGIAGATIMGDGSVALILDVDAL 525 >UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH72 RepID=A1K5G3_AZOSB Length = 696 Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust. Identities = 232/427 (54%), Positives = 306/427 (71%), Gaps = 2/427 (0%) Query: 221 ITFETVEVSP-KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG 279 + ET+ +P PP + E + RS +S SIRV VE+VD++++LVG Sbjct: 267 VPLETLPAAPFGTDDPPAAAVPDEADAQPAATARELPRSADS-SIRVGVERVDRMMDLVG 325 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 ELVITQSML ++ + P L+ + LQR+ RDLQ+SVM+IRM+P+ VFSR+PRL Sbjct: 326 ELVITQSMLLDAAAAIGPAAGERLLAGLALLQRHTRDLQQSVMAIRMVPVSMVFSRFPRL 385 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 V DL +L KQ++L L G TELDK L+E++ DPLTHLVRN +DHGIE E+R AAGK Sbjct: 386 VHDLGMRLDKQIDLVLEGEHTELDKGLVEKLADPLTHLVRNCIDHGIEPAERRRAAGKPE 445 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGF 459 G L L+A H GG++ IEV DDGAGL+RER++A+A +QGL SE+MSD+E LIF PGF Sbjct: 446 AGRLRLAASHLGGHVLIEVEDDGAGLDRERLIARARAQGLPCSEDMSDEEAWQLIFLPGF 505 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STAEQVTD+SGRGVGMDVV+RNI +GG V+I S+ G GT + +PLTLAIL+GM V V Sbjct: 506 STAEQVTDLSGRGVGMDVVRRNIAALGGRVDIVSRAGRGTRFSVSVPLTLAILEGMQVAV 565 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 DEVFILPL+A++ESLQP A + + G R++ VRGEY P+VEL F V A + T+ Sbjct: 566 GDEVFILPLDAIVESLQPERASVRSIGGAPRLIAVRGEYWPVVELGHFFAVPEAGRDWTR 625 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 GI+V+++ G R AL VD L+GQ QVV+K LE+++R+VPG+S+AT+LGDG VALI+DV+A Sbjct: 626 GIMVLVERNGSRAALFVDGLVGQQQVVIKPLETHFRRVPGVSSATLLGDGRVALILDVAA 685 Query: 640 LQAINRE 646 L R+ Sbjct: 686 LIGTARD 692 Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 50/106 (47%), Positives = 64/106 (60%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+S FYQ FF+EA E LA +E LL + PD E++ IFRAAHSIKG A TFGF Sbjct: 1 MAFDMSQFYQIFFEEAAEHLATIETVLLSIDAARPDPEKVAEIFRAAHSIKGSAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 L TH ME+LLD+ RRG L ++ L D + L A++ Sbjct: 61 DLTGLTHEMESLLDDVRRGRRPLTQAMVQACLAAGDALHGLLAAHR 106 >UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacteria RepID=Q2T8Z1_BURTA Length = 747 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/379 (59%), Positives = 284/379 (74%), Gaps = 2/379 (0%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 +SIRV+VEKVDQL+NLVGELVITQSMLAQ ++ELD LI +GQL+RN+R+LQE+V Sbjct: 355 SSIRVSVEKVDQLLNLVGELVITQSMLAQAATELDSNQRERLIGGIGQLERNSRELQEAV 414 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MSIRM+P+ VF+R+PR+VRDLA +LGKQV+L ++G TELDK IE++ DP+ HLVRNS Sbjct: 415 MSIRMLPISAVFNRFPRVVRDLAMQLGKQVDLQMIGEHTELDKGFIEKLADPMMHLVRNS 474 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE P+ R+ GK + G L L A QG +I IEV DDG GL RERIL KA GL V Sbjct: 475 VDHGIEAPQARVRGGKPATGRLTLRASQQGSDIAIEVIDDGGGLKRERILEKARESGLPV 534 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 SE M+D EV MLIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I Sbjct: 535 SEAMTDREVWMLIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAI 594 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAILDGMSVR+ +I+PL + E++ P + D+ + G RV+ VRGEYLP+ Sbjct: 595 SIRLPLTLAILDGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQGSGRVVNVRGEYLPL 654 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L +F T+ + + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + Sbjct: 655 RSLADLFETGQDTTDGS--LALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAA 712 Query: 622 AATILGDGSVALIVDVSAL 640 ATI+GDG VALI+DV +L Sbjct: 713 GATIMGDGRVALILDVMSL 731 Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 64/150 (42%), Positives = 86/150 (57%), Gaps = 2/150 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F FF+EA+E L ME LL PDAE LNAIFRAAHSIKGGAG FGF Sbjct: 1 MSIDLSQFSDVFFEEAEEHLRAMETLLLACDVSNPDAEDLNAIFRAAHSIKGGAGAFGFV 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH++E LLD R+ E+ L +++ FL D++ L AY+ ++ S Sbjct: 61 ELTGVTHVLETLLDRIRKKELPLRAAMVDAFLRATDLLAVMLAAYRSAEALPEQSIAETK 120 Query: 121 QALRQLALEAKGETPSAVTRLS--VVAKSE 148 ++L +L+ AVT +S V A +E Sbjct: 121 RSLERLSQGEGAHDGDAVTPVSEPVAAPAE 150 >UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD03_RHOVA Length = 701 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 269/666 (40%), Positives = 397/666 (59%), Gaps = 37/666 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++D++ F TFFDE E+L D++ L L A D+E LNAIFRA HSIK GA F F Sbjct: 8 ALDLNQFRATFFDECAEVLPDLDSRLSTLDANAADSENLNAIFRAVHSIKAGAAAFNFRS 67 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE-PDAASFDYIC 120 L H E LLD R M+L+ D+ ++ L D++ +DA + P+ D + Sbjct: 68 LVTFAHGFEALLDRLRDDRMELSADVASVCLRAGDVLAALVDAAQMDTAIPEGFGADVLA 127 Query: 121 Q------------ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK 168 + + + A + + R++ P E R + +I+ LK Sbjct: 128 EVEGLMNSDVGRASFPEATAAATDDGEMRIWRITFT----PHRELFRHANEPLLIIRELK 183 Query: 169 A-GEVDLLEE--ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 GE+D+ + EL L L D + S L + I V FV DQ Sbjct: 184 RLGELDVCCDRCELPDLERL-DPEESYLGFSFRLRTKASRAAIDEVFEFV---DQDCDLV 239 Query: 226 VEVSP-----KISTPPVLKLAAEQAPT-GRVEREKTTRSNESTSIRVAVEKVDQLINLVG 279 VEV P + PP + +E P GR E+ +S + +RV + +VD+LIN+VG Sbjct: 240 VEVEPAETPRETKVPP--RALSESLPAAGRDGSERKAKS--PSFVRVDLARVDRLINMVG 295 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 ELVITQ+ML Q+ SE + +L + R+LQE VM+IRM P VF+R RL Sbjct: 296 ELVITQAMLTQQLSEHGTNMRDQRVQGADELAAHIRELQECVMAIRMQPARTVFARMGRL 355 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VRDL+ KLGK+V L G TE+DK+++E ++DP+TH++RN++DHGIE+PE RLAAGK Sbjct: 356 VRDLSHKLGKKVRLVTSGDETEVDKTIVEELVDPITHMIRNAIDHGIEMPELRLAAGKPE 415 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPG 458 + LSA + GNI I + DDGAG++ E++LAKA S+G+ + +S++E+ LIFAPG Sbjct: 416 EAVIHLSATQRAGNILITIADDGAGIDTEKVLAKAISKGIVRDDAKLSEEEIHELIFAPG 475 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FSTAE+VT+VSGRGVGMDVV+RNI +GG + S QG G++ +++PLTLA+LDGM V Sbjct: 476 FSTAEKVTEVSGRGVGMDVVRRNIASIGGRIHTNSVQGQGSSFTLVIPLTLAVLDGMHVA 535 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 V +E +I+PL +++E+++P + +AGG+ V+ +RGEY+ ++ L ++FNVAG ++ Sbjct: 536 VREEKYIIPLASIVETVRPDRRQIRSVAGGD-VIFIRGEYIRLIHLHRLFNVAGEGEDSH 594 Query: 579 QGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 +VV++++ G + L+VD+LIGQ Q V KNL N VPGI+ ATILG+G VALI+++ Sbjct: 595 PSLVVVVETENGTKAGLVVDELIGQQQFVFKNLNENADPVPGIAGATILGNGRVALILNL 654 Query: 638 SALQAI 643 + +I Sbjct: 655 EDICSI 660 >UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pseudomallei RepID=A3NFT9_BURP6 Length = 758 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 224/379 (59%), Positives = 283/379 (74%), Gaps = 2/379 (0%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 +SIRV+VEKVDQL+NLVGELVITQSMLAQ + ELD L+ +GQL+RN+R+LQE+V Sbjct: 366 SSIRVSVEKVDQLLNLVGELVITQSMLAQAAIELDANQRERLVGGIGQLERNSRELQEAV 425 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MSIRM+P+ VF+R+PR+VRDLA +LGKQVEL ++G TELDK IE++ DP+ HLVRNS Sbjct: 426 MSIRMLPISAVFNRFPRVVRDLAMQLGKQVELQMIGEHTELDKGFIEKLADPMMHLVRNS 485 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE P+ R+ GK + G L L A QG +I IEV DDG GL RERIL KA GL V Sbjct: 486 VDHGIEAPQARVRRGKPATGRLTLRASQQGSDIAIEVIDDGGGLQRERILEKARESGLPV 545 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 SE+M+D EV MLIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I Sbjct: 546 SESMTDREVWMLIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAI 605 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAILDGMSVR+ +I+PL + E++ P + D+ + RV+ VRGEYLP+ Sbjct: 606 SIKLPLTLAILDGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQRSGRVVNVRGEYLPL 665 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L +F T+ + + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + Sbjct: 666 RSLADLFETGEDTTDGS--LALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAA 723 Query: 622 AATILGDGSVALIVDVSAL 640 ATI+GDG VALI+DV +L Sbjct: 724 GATIMGDGRVALILDVMSL 742 Score = 109 bits (273), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/127 (43%), Positives = 78/127 (61%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D++ F + FF+EA+E L ME LL PDAE LN IFRAAHSIKGGAG FGF+ Sbjct: 17 MSIDLTQFSEVFFEEAEEHLRAMETLLLACDVSHPDAEDLNGIFRAAHSIKGGAGAFGFA 76 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH++E LLD R+ E+ L +++ FL D++ L AY+ + S + Sbjct: 77 ELTGVTHVLETLLDRIRKRELPLRAAMVDAFLRATDLLAVMLAAYRSGEALPEQSIEATK 136 Query: 121 QALRQLA 127 ++L +L+ Sbjct: 137 RSLERLS 143 >UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM20_HIRBI Length = 693 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 261/670 (38%), Positives = 405/670 (60%), Gaps = 24/670 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D F QTFF+E DELL E LQPE D+E LN +FRA HSIK GAG F L Sbjct: 3 DFEQFRQTFFEECDELLQRFEDVATTLQPEGNDSETLNELFRAVHSIKAGAGAFKLDRLV 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H +E+ LD+ R + L D L +++ D+++E ++ + QE + L Sbjct: 63 VYAHELEDFLDQVRGDLIGLQADGPALIIQSGDVLRELVENAQSGQEAPDGLESVTLEKL 122 Query: 124 RQLALEAKGE-TPSAV------TRLSVVAKSEPQDEQSRSQSPRRII---LSRLKAGEVD 173 RQL + E TP AV TR S P + + +++ LS L + Sbjct: 123 RQLNPKKAIEVTPVAVVENAEATRTSYEIYFRPFRSMYETANEPQLLFEALSDLGDINIH 182 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 + ++ L+ L D ++ S + L D + +DITAV FV + ++T + +S + Sbjct: 183 IDTSKVVELSKL-DPMESYFSWNIELCSDCSVEDITAVFEFVEDDCELTIKAKTIS-EAD 240 Query: 234 TPPVLKLAA--EQAP------TGRVEREKTTRSN-ESTSIRVAVEKVDQLINLVGELVIT 284 ++K ++ +++P G+ + +T R+ + SIRV +EKVDQL+N+VGELVI Sbjct: 241 AEEIVKSSSVDDKSPDGAQVIVGKSAKPETERAKPQLGSIRVDLEKVDQLVNMVGELVIA 300 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 Q+M + S + + + ++ L R LQE VM+IRM P++ +FSR+PRLVRDL+ Sbjct: 301 QAMALESISSEIGIAQVNQLQALEDLTMRTRQLQEGVMAIRMQPIKALFSRFPRLVRDLS 360 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 KL K V L L G +TE+DK++IE + DPLTH++RN +DHGIE+PE R+ AGK + G + Sbjct: 361 TKLEKDVTLILEGEATEVDKTIIEELSDPLTHMIRNCMDHGIEMPEDRVQAGKKAQGTVR 420 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAE 463 LSAE + G I I V+DDG GL+ ++++A+A QGL + ++ +++ M+IF PGFSTA Sbjct: 421 LSAEQRNGRILIRVSDDGRGLDPDKVVARAIQQGLIAEGDELTKEDIEMMIFRPGFSTAS 480 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 V+DVSGRGVGMDVV+RNIQK+GG + + SK+G G+ + LPLTLA+LDGM V A E Sbjct: 481 AVSDVSGRGVGMDVVRRNIQKLGGRITLDSKKGHGSCFTLALPLTLAVLDGMLVATAGER 540 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA-GAKTEATQGIV 582 +++PL++++E++ P + + + G +VL +RG + +V+L ++ TE + + Sbjct: 541 YVIPLSSIVETVCPAPSQIKQMPDGGQVLSLRGNTIRLVDLCGCMGLSRKGLTEPLRKLA 600 Query: 583 VILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VI+++ GR+ ++VD+L+GQ QVV+K+LE+NY +PG++ + ILGDG V LI+DV L Sbjct: 601 VIVETEFGRQVGIVVDELLGQQQVVIKSLETNYYNIPGVAGSAILGDGRVRLILDVDGLV 660 Query: 642 AINREQRMAN 651 + + ++N Sbjct: 661 TMTPKPSLSN 670 >UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blandensis MED297 RepID=A4BJG3_9GAMM Length = 651 Score = 433 bits (1114), Expect = e-120, Method: Compositional matrix adjust. Identities = 220/421 (52%), Positives = 293/421 (69%), Gaps = 13/421 (3%) Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNEST-----------SIRVAVEKVDQLINLVGEL 281 ++PP + A E PT K+ SN +T +IRV VEKVD LINLVGEL Sbjct: 221 TSPPQVD-AVESKPTETKAPAKSAVSNPTTESAQAAQKSGGTIRVNVEKVDSLINLVGEL 279 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 VITQSMLA LD N + + L RN R++QESVMSIRM+P+ +VF+R+PR+ R Sbjct: 280 VITQSMLAMVGQNLDDANQEKMNGVIETLHRNTREIQESVMSIRMLPISFVFNRFPRVAR 339 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 D AGKLGK+V L + G TE+DK L+E++ DPLTHL+RNS+DHGIE P RL AGK G Sbjct: 340 DTAGKLGKKVNLVIEGGDTEIDKGLVEQLADPLTHLMRNSIDHGIESPSDRLQAGKPETG 399 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFST 461 + LSA QGGNI I V DDGAGLNR++IL KA +G+TV+ + D+ + LIF PGFST Sbjct: 400 TVRLSARQQGGNIIISVIDDGAGLNRDKILNKARERGMTVNADSPDEAIWPLIFEPGFST 459 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 A+ VTDVSGRGVGMDVVK+N+ +GG ++I S G GTT+ ++LPLTLAILDGM+V + Sbjct: 460 ADAVTDVSGRGVGMDVVKKNLSNLGGRIDIDSVPGYGTTLSLILPLTLAILDGMAVSLGS 519 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 E +I+PL ++ES+QP + L G E +L VRG Y P+V L +V +V T GI Sbjct: 520 ETYIIPLGNIVESIQPNAEQVKTLNGDE-LLNVRGHYWPVVRLHRVMSVRPRFERITDGI 578 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 V++ +SG RR+ +LVD+L+GQ QVV+K+LE +Y+++PG+ AT++GDG VA I+D+ +L Sbjct: 579 VILTESGKRRFGILVDELLGQQQVVIKSLEQHYKRIPGVGGATVMGDGQVAFILDLESLG 638 Query: 642 A 642 A Sbjct: 639 A 639 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/111 (46%), Positives = 70/111 (63%), Gaps = 1/111 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F++ FF+E+ E L +EQ L+ L P PDAE LN IFRAAHSIKG +G FGF+ Sbjct: 1 MSMDLGQFHEVFFEESQEHLDALEQGLMALDPSQPDAELLNTIFRAAHSIKGSSGVFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP 111 L + TH+MEN LDE R+ Q ++ L D ++ + Y Q+ EP Sbjct: 61 ALGDITHVMENRLDEWRKEISQPQASQVDHLLTVVDALRHLVSVY-QNGEP 110 >UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 Tax=Shewanella RepID=Q0HIF1_SHESM Length = 736 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/381 (55%), Positives = 283/381 (74%), Gaps = 1/381 (0%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 + ++RV K+D L+NL GELVITQSML +EL L T++ +L+RN R++QE Sbjct: 351 QDATLRVETSKIDTLVNLAGELVITQSMLTLIGNELGGELGERLKTALNELERNTREMQE 410 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 +VMS+RM+P+ +VF+R+ RLVRDL+ +LGK V L + G +TE+DK +IE+++DPLTHLVR Sbjct: 411 AVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVSLVIEGGNTEIDKGMIEKLVDPLTHLVR 470 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NSLDHGIE PEKRLAAGK G L L A +GG+I I V DDG GLNRERIL KA G+ Sbjct: 471 NSLDHGIEKPEKRLAAGKTEAGVLSLKASQRGGSIVIAVHDDGGGLNRERILQKARENGM 530 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 + ENM+D +V LIFA GFSTA +VTDVSGRGVGMDVV++NI+ +GG ++I S G G Sbjct: 531 ALPENMTDKQVWQLIFAAGFSTAAEVTDVSGRGVGMDVVRKNIEALGGRIDIDSVAGQGA 590 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 T I LPLTLAI+DGMSV V ++++ILPL ++ES+QP+ L LA ER+L VR EYL Sbjct: 591 TFEIQLPLTLAIVDGMSVSVGNQIYILPLVHIIESIQPQTEQLKFLA-KERLLRVREEYL 649 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P++ L+++ + GIVV+L+S +R+ L VD L+GQ QVV+K+LE +YR++PG Sbjct: 650 PLLNLYQLMEIEPQAKTPEAGIVVLLESNNKRFGLCVDALVGQQQVVIKSLEKHYRRIPG 709 Query: 620 ISAATILGDGSVALIVDVSAL 640 +S ATI+GDGSVALI+DV +L Sbjct: 710 VSGATIMGDGSVALILDVESL 730 Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 64/139 (46%), Positives = 92/139 (66%), Gaps = 3/139 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++++F+Q FF+E+ E L +MEQ LL L +APD E+LN IFRAAHSIKGG+G FGF+ Sbjct: 1 MSINMAEFHQVFFEESHEHLENMEQLLLALDLDAPDPEELNTIFRAAHSIKGGSGIFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+MENLLD+ R+G +L++ +I+L L T D + L+ Y++ + D ++ Sbjct: 61 ALTSVTHVMENLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYREEEPIDWQQVEF-- 118 Query: 121 QALRQLALEAKGETPSAVT 139 A QL GET S T Sbjct: 119 -AKNQLVAVLNGETFSTQT 136 >UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax=cellular organisms RepID=Q21G15_SACD2 Length = 806 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 217/416 (52%), Positives = 305/416 (73%), Gaps = 15/416 (3%) Query: 239 KLAAEQAPTGRVEREKTTR----------SNESTSIRVAVEKVDQLINLVGELVITQSML 288 KL AP VE+++ + S ++T IRV ++K+D LIN+VGELVITQSML Sbjct: 361 KLTPILAPVSVVEQKEPVKASKAKPANKASTDATFIRVGIDKIDNLINMVGELVITQSML 420 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 Q S ++D L+ + QL++N R+LQE VM IRM+P+ + F+R+PRLVRDL+ +L Sbjct: 421 GQLSEDVDVAKVPRLVEGLNQLEQNTRELQEGVMRIRMLPISFSFNRFPRLVRDLSQRLE 480 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 KQVEL + G +TELDK+++E+I DPL HLVRN++DHGIELP RLAAGK VG + L A Sbjct: 481 KQVELVIHGENTELDKTVMEKIGDPLVHLVRNAVDHGIELPAARLAAGKPEVGTITLDAY 540 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQV 465 H+GGNI IE+ DDGAGLNR+++L KA + + + + M+D++V LIF PGFSTA V Sbjct: 541 HKGGNIVIEIKDDGAGLNRDKVLQKAIDKKIISASDAAMMTDEQVYDLIFQPGFSTAAAV 600 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 TDVSGRGVGMDVVKRNIQ + G V+I SK G G+TI I LPLTLAILDG +RV ++I Sbjct: 601 TDVSGRGVGMDVVKRNIQALNGAVDIASKLGEGSTITIRLPLTLAILDGQLIRVGGNIYI 660 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG-IVVI 584 PL +++ES+Q R ++ LAGG++V +R EY+PI+EL K F++ + T++ +G ++V+ Sbjct: 661 FPLISIVESMQCRSEYVNQLAGGQQVFRLRDEYVPIIELSKTFSIP-SDTDSIEGALMVV 719 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++ G++ ++VD+L+GQ QVV+K+LE NY++V G+S ATILGDG+VALI+DV ++ Sbjct: 720 VEFDGQKVGVIVDELLGQQQVVIKSLEQNYKQVEGVSGATILGDGTVALILDVQSI 775 Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 59/148 (39%), Positives = 84/148 (56%), Gaps = 1/148 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F+Q FF+E+ E L ME L+ L P D E +NAIFR AHSIKGG+ TF F+ Sbjct: 1 MSIDLSQFHQVFFEESVEGLDIMESALMELDPTDVDDETINAIFRCAHSIKGGSATFSFN 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLD+ R G+ L +NL LE+ D ++E L A QS E + Sbjct: 61 AICDFTHVLETLLDQVRSGQRSLVLTHVNLLLESVDCLREML-ALAQSGELEKTEQAATL 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSE 148 Q + L +G P+ T + S+ Sbjct: 120 QRQFEAILANEGPAPAQKTEAAPTVNSD 147 >UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Tax=Gammaproteobacteria RepID=A6W0H5_MARMS Length = 671 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 208/399 (52%), Positives = 294/399 (73%), Gaps = 5/399 (1%) Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A+ P+ + K E+TSIRV K+D+L+NLVGELVITQSML SE+ Sbjct: 270 AKPTPSSKASETKA----EATSIRVETNKIDKLVNLVGELVITQSMLNLIGSEVPESIAD 325 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 + +++ +L+RN R++QE+VMS+RM+P+ +VF+R+PRLVRDL+ KL K++ L + G +TE Sbjct: 326 KMQSALIELERNTREIQEAVMSVRMLPISFVFNRFPRLVRDLSTKLEKKINLVIEGGNTE 385 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +DK+L+E+I DPL HL+RNS+DHGIELP KRL A K+ G ++LSA +GG I I +TDD Sbjct: 386 IDKNLVEKISDPLLHLIRNSVDHGIELPAKRLEANKSETGIVMLSAAQKGGEIVITITDD 445 Query: 422 GAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GAGLNRERI+AKA +G+++ E +SD V LIF GFSTA +VTDVSGRGVGMDVV+RN Sbjct: 446 GAGLNRERIIAKAVEKGISLPEPLSDSAVWQLIFEAGFSTAAEVTDVSGRGVGMDVVRRN 505 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+ +GG ++I S G GT I LPLTLAILDGM+V +D+VFI+PL ++ES+QP Sbjct: 506 IESLGGRIDISSTAGMGTVFTINLPLTLAILDGMTVEASDQVFIIPLVNIVESIQPVAEQ 565 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + + G+++L VR EY P++++ K + +T GIVV++++ +R+ L++D L+G Sbjct: 566 IKHIK-GKKLLWVRDEYWPLIDIGKTLGGSPNETNMETGIVVLVETSKQRFGLIIDSLLG 624 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 Q QVV+KNLE +YR+V GI+ ATI+GDGSVALI+DV ++ Sbjct: 625 QQQVVIKNLERHYRRVEGIAGATIMGDGSVALILDVDSI 663 Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/109 (47%), Positives = 73/109 (66%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++S + + FF+EA E L ME LL ++PD E+LN++FRAAHSIKGG+ FGF L Sbjct: 3 NLSQYNEVFFEEAQEHLETMETLLLAYNIDSPDMEELNSVFRAAHSIKGGSDIFGFKALT 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD 112 TH+MEN+LD AR E+ L TD+I + LET D+++ L Y++ E D Sbjct: 63 GLTHVMENMLDSARNNELTLTTDLITVLLETTDVLKNILSCYREEAEID 111 >UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC1E2 Length = 697 Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust. Identities = 220/381 (57%), Positives = 289/381 (75%), Gaps = 1/381 (0%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 ES SIRV K+D ++NLVGELVITQSML+ +++ L ++ +LQRN R++QE Sbjct: 304 ESASIRVDTTKIDAMVNLVGELVITQSMLSMIGQDVEGQVGERLQLAIDELQRNTREIQE 363 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVMS+RM+P+ F+R+PRLVRDLAGKLGKQVEL L G STE+DKSLIE+I+DPLTHLVR Sbjct: 364 SVMSMRMLPLTATFNRFPRLVRDLAGKLGKQVELVLQGGSTEIDKSLIEKIVDPLTHLVR 423 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGIE+P+KR+AAGK G +ILSAE +GG+I I + DDG GL+R++IL KA S GL Sbjct: 424 NSIDHGIEMPDKRVAAGKPEKGTVILSAEQKGGSIIISIIDDGGGLHRDKILDKARSNGL 483 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 TVS++M D EV LIF PGFSTAE +TDVSGRGVGMDVV+RNI+ +GG ++I+S G G+ Sbjct: 484 TVSDDMPDSEVWQLIFQPGFSTAEAITDVSGRGVGMDVVRRNIESIGGRIDIESSAGEGS 543 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 I LPLTLAI+DGM V V ++F++PL ++ES QP + L L G + VL +R +Y Sbjct: 544 AFFIHLPLTLAIVDGMCVSVGKQIFVIPLLNIIESFQPTKQQLKTL-GNDTVLYIRDQYW 602 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+V L+ V A T+GIVV+L+S +R+ +LVD L+GQ QVV+K+LE +YRKV G Sbjct: 603 PLVPLYDFMEVEDAALSPTEGIVVLLESSKKRFGVLVDALVGQQQVVIKSLEEHYRKVAG 662 Query: 620 ISAATILGDGSVALIVDVSAL 640 I+ ATI+GDG VALI+D ++ Sbjct: 663 IAGATIMGDGKVALIIDADSI 683 Score = 135 bits (341), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 61/106 (57%), Positives = 81/106 (76%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+DI F+ FFDE+DE L DMEQ L+ L E+PD E+LN+IFRAAHSIKGG+G FGF Sbjct: 1 MSIDIEQFHGVFFDESDEHLDDMEQLLMSLDVESPDPEELNSIFRAAHSIKGGSGIFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 L TH+MENLLD+AR E+ + DI+N+ LET D++++ L+AY+ Sbjct: 61 ALMNLTHVMENLLDKARNNELSVTADIVNVLLETLDVLKDTLNAYR 106 >UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07SD9_RHOP5 Length = 713 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/382 (54%), Positives = 286/382 (74%), Gaps = 2/382 (0%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + SIRV V+KVD+L+NLVGELVITQ+ML ++ S L ++ LI + L ++AR+LQES Sbjct: 298 TQSIRVDVDKVDRLVNLVGELVITQAMLTEQGSLLPNDHYPTLIQGIEALAQSARELQES 357 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM+IR P++ VF+R PR+VRDLA LGK+V + G TE+DK++IE++ DPLTH++RN Sbjct: 358 VMAIRAQPVKSVFARMPRVVRDLAATLGKEVRIVTSGEMTEIDKTVIEQLNDPLTHMIRN 417 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 +LDHGIE PE R+AAGK G + LSA H+ G I IEV DDG GLNRE++LAKA +GL Sbjct: 418 ALDHGIEAPEARVAAGKPRQGTIHLSAAHRSGRIVIEVADDGRGLNREKVLAKAQERGLV 477 Query: 441 -VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 ++SD+E+ LIF P FSTA+ V+++SGRGVGMDVVKRN+Q +GG + +QS+ G G+ Sbjct: 478 PPGASLSDEEIDGLIFLPAFSTADVVSNISGRGVGMDVVKRNVQSLGGRITVQSRPGAGS 537 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 + LPLTLA++DGM V V E FI+PL A++ESL+P+ AD+HPL G +L +RGEYL Sbjct: 538 RFTLSLPLTLAVVDGMVVSVGRETFIIPLTAIIESLRPQPADIHPLVGRGELLALRGEYL 597 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 P++ L + F +AGA + +GIV+++QS ++VD+L+GQ QVVVK+LE+NY V Sbjct: 598 PLIHLHRCFAIAGAVADPCRGIVIVVQSETAGCVGVVVDELLGQQQVVVKSLEANYDPVD 657 Query: 619 GISAATILGDGSVALIVDVSAL 640 GIS ATILG+G VALI+D++ L Sbjct: 658 GISGATILGNGKVALILDIARL 679 >UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSE9_TERTT Length = 822 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 201/384 (52%), Positives = 280/384 (72%), Gaps = 3/384 (0%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 E+ SIRV ++KVD LIN+VGELVITQSML Q ++ D L+ + QL++N R+LQE Sbjct: 409 ETGSIRVGIDKVDNLINMVGELVITQSMLGQLGTDFDVNRLPKLLEGLSQLEQNTRELQE 468 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVM IRM+P+ + FSR+PR+VRDL LGK ++L ++G TELDK+++E+I DPL HLVR Sbjct: 469 SVMRIRMLPISFAFSRFPRMVRDLGQALGKDLQLEMLGEHTELDKTVMEKIGDPLVHLVR 528 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 N++DHGIE+P RLA GK + G + L+A HQGGN+ IE++DDG GL+RE+I+ KA + L Sbjct: 529 NAVDHGIEMPADRLAKGKPANGKITLNAYHQGGNVVIEISDDGKGLDREKIIEKAIEKNL 588 Query: 440 TV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 E +D++ LIF PGFSTA+ V+D+SGRGVGMDVVKRNIQ + G VEI+S + Sbjct: 589 VTPLECETFTDEQAYDLIFQPGFSTAQAVSDLSGRGVGMDVVKRNIQALNGIVEIRSTKD 648 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 G+TI I LPLTLAILDG VRV + +I PL +++ESL R ++ +AGG V ++R Sbjct: 649 KGSTITIRLPLTLAILDGQLVRVGNNTYIFPLVSIIESLHCRREFINKVAGGCNVFKLRD 708 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +Y+PI+EL+K F V + ++V++ G + ++VD+L+ Q QVV+K+LE NYR+ Sbjct: 709 DYVPIIELYKTFTVQPDAIDMDHSLIVVVDYEGGKVGVVVDELLAQQQVVIKSLEQNYRR 768 Query: 617 VPGISAATILGDGSVALIVDVSAL 640 V GIS ATILGDG+VALI+D++ + Sbjct: 769 VDGISGATILGDGTVALILDITGI 792 Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 48/102 (47%), Positives = 72/102 (70%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D++ F+Q F++E+ E L ME L+ L P+ D+E +NAIFRAAHSIKGG+ TFGF+ Sbjct: 1 MTIDLAQFHQVFYEESFEGLDVMESALMELDPDNIDSETINAIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 + E TH +E +LD+ R G + + D +NL L++ D M+E L Sbjct: 61 SVSEFTHDLETILDQVRAGTRKFSGDDVNLCLKSVDCMREML 102 >UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Tax=Proteobacteria RepID=Q2BJR4_9GAMM Length = 815 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 219/477 (45%), Positives = 317/477 (66%), Gaps = 22/477 (4%) Query: 199 LPGDIAEDDITAVLCFVIEADQITFE----------TVEVSPKISTPPV-------LKLA 241 L D E++IT + +V + ++T + E P S PV A Sbjct: 321 LRSDCPEEEITEIFEWVEDECELTIQGASKVSTQPAETETQPVASEQPVEAASDKPATPA 380 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A Q+ + K + ES+SIRV +K+D LIN VGELVITQ+ML Q EL + G Sbjct: 381 AVQSTSPAASPRKAKPAAESSSIRVETDKIDALINRVGELVITQAMLGQVGDELSDLVSG 440 Query: 302 DLI----TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 I + + QL+RN RDLQE VM +RM+P+ +VF+R+PRLV D++GKLGK+VEL + G Sbjct: 441 SEIERLQSGLEQLERNTRDLQEDVMRVRMLPISFVFNRFPRLVHDVSGKLGKKVELIITG 500 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TE+DK+++E+I DP+ HL+RNSLDHG+E PE+R+AAGK G + L A HQGG I I+ Sbjct: 501 EQTEIDKTVMEKIGDPMVHLIRNSLDHGLESPEERVAAGKPETGKVQLDAYHQGGFIIID 560 Query: 418 VTDDGAGLNRERILAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 + DDG GLN E+I KA +GL T +N+SD E+ LIF PGFSTAE V+D+SGRGVGMD Sbjct: 561 IIDDGRGLNTEKIYQKALEKGLVTTDQNLSDSEINELIFKPGFSTAEAVSDLSGRGVGMD 620 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV+RNI+ +GGHV ++S+ G G+T + LPLTLAILDG +RV +E +I+PL +++E++ Sbjct: 621 VVRRNIESLGGHVRVKSEPGHGSTFTVSLPLTLAILDGQLIRVHNETYIVPLISIVETIL 680 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 ++ L P+AG ++L R EY+P++ L +F + + + ++ I+++GG++ L+V Sbjct: 681 ADKSSLSPIAGENKLLHFRDEYIPLINLRSLFKLPMQEEQMESCLIAIVENGGQKVGLIV 740 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 D+L GQ QVV+K+LE N++++ G + ATILGDGSVALI+D++ L + A TA Sbjct: 741 DELFGQQQVVIKSLEVNFKRIEGFAGATILGDGSVALILDIAGLMKRGLDHETARTA 797 Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 81/125 (64%), Gaps = 2/125 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F TF +E+ E L ME LL L ++ D E +N IFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDLSQFIGTFLEESYEGLEVMESSLLAL--DSADEETINTIFRAAHSIKGGAGTFGFS 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLDE R G+ ++ ++NL LE+ D ++ L+A + DA + + Sbjct: 59 EVADFTHVVETLLDEMRSGKQEVTPPLVNLLLESVDCIKMLLEATQDGPAADANQINQVQ 118 Query: 121 QALRQ 125 + L++ Sbjct: 119 ERLQK 123 >UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EU21_ARCB4 Length = 685 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 241/673 (35%), Positives = 394/673 (58%), Gaps = 45/673 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 MS DIS + + F +EA EL + LL + +++ +FR H++KG + Sbjct: 1 MSFDISKYREMFLEEAVELFESADNVLLEAENNGSLTDDEMGQLFRDVHTLKGSGASVEL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + E TH +ENL+D+ R +++ ++ ++ D+M+E LD +Q + Sbjct: 61 AFFAEFTHDVENLMDKLRSHKIEFVPEMAGTLIDGLDVMKEILDLEVSNQMTREKFTEMT 120 Query: 120 CQALRQLALEAKG------ETPS-AVTRLSVVAKSEPQD------------EQSRSQSPR 160 L + + G E P V + V++ + ++ EQ S+S Sbjct: 121 SSLLEDIRAYSNGGTVKKEEAPKIEVKKEEVISSNSSENKENFGFFDNGLNEQRDSKSQP 180 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ 220 I + + D+ E + ++ K ++ L+ D D+ F + Sbjct: 181 YGIFA-----DDDMNENHKNYGFFDDNLEKKSNDLN---DEDFKLDNSKEDFGFFDDMPS 232 Query: 221 ITFETVEVSPKIS-----TPPVLK----LAAEQAPTGRVERE-KTTRSNESTSIRVAVEK 270 IT + V + I TP V++ +A + VE E K SN + SIRV ++K Sbjct: 233 ITPDAVMKTNDIEEQKEETPVVVQKESEVATRRMKNNNVEEEAKKVPSNNNNSIRVNLDK 292 Query: 271 VDQLINLVGELVITQSMLAQRSSELDPVN-HGDLITSMGQLQRNARDLQESVMSIRMMPM 329 +D L+N VG+LVIT +ML Q SS ++ G ++ + L+R+ RD+Q+S+MSIRM+PM Sbjct: 293 IDLLMNNVGDLVITNAMLTQFSSTIEETKTRGSVLERLELLERHIRDMQDSIMSIRMVPM 352 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 + ++S++P++VRD++ KL K+VE G + E+DK++IE + DPL H++RNSLDHGIE+P Sbjct: 353 DSIYSKFPKVVRDISKKLNKKVEFKHYGDNVEIDKAMIEGLTDPLMHIIRNSLDHGIEMP 412 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN----M 445 E R+A GK G++ +SAE G + I + DDG G++ E++ KA +G + EN M Sbjct: 413 EDRVALGKPETGSISISAEQANGQMIITIQDDGKGIDSEKVAQKALEKG-QIDENQYNAM 471 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 +++E A+LIF G STA+++TD+SGRGVGMDVVK NI K+GG + + ++ G GTTI I+L Sbjct: 472 TNNEKALLIFGAGISTADKITDISGRGVGMDVVKTNIHKLGGVINLDTEIGKGTTITIML 531 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG-ERVLEVRGEYLPIVEL 564 PLTLAILDG+ +RVA++ +ILPL++++ESLQP + + G + +L +R E++P+V+L Sbjct: 532 PLTLAILDGLDIRVANQKYILPLSSIVESLQPTADMIKKIGDGTQDLLMLREEFIPVVKL 591 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 ++F + + + G++++++SG + AL +D+ + QHQVVVK L+ N+R V GI AAT Sbjct: 592 HQLFGLEKSFEKLEDGMLIVVKSGNTKVALSIDEFLNQHQVVVKPLDKNFRSVQGIGAAT 651 Query: 625 ILGDGSVALIVDV 637 + GDGS+ LI+DV Sbjct: 652 VKGDGSIGLILDV 664 >UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9QB66_9VIBR Length = 727 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 212/429 (49%), Positives = 297/429 (69%), Gaps = 7/429 (1%) Query: 219 DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES-TSIRVAVEKVDQLINL 277 D E+ ++ P ST V L AP+ + K + + S +SIRV +EKVD LINL Sbjct: 285 DSAAHESSQMLPTASTE-VNSLPNPAAPSKKEAANKPAKMDSSVSSIRVDIEKVDNLINL 343 Query: 278 VGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 VGELVITQSML + ++ L + QL +N++DLQE+V++IRM+PM + FSR+P Sbjct: 344 VGELVITQSMLTELGNDFSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFP 403 Query: 338 RLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGK 397 RLVRDL G+LGK+V+L + G TELDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK Sbjct: 404 RLVRDLCGRLGKKVDLQIQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGK 463 Query: 398 NSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL----TVSENMSDDEVAML 453 G + L A HQGG+I +E+ DDGAG++ +++ KA +G+ T +++D ++ L Sbjct: 464 PETGVITLQAFHQGGSIIVEIRDDGAGIDCDKLWRKAVEKGVLEPHTQRSDLTDKQIINL 523 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IFAPGFSTAEQV+D+SGRGVGMDVVKRNI+++GG +E++S+ G G+ I LPLTLAILD Sbjct: 524 IFAPGFSTAEQVSDISGRGVGMDVVKRNIEELGGQIEVESELGRGSRFTISLPLTLAILD 583 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 G V+VAD+V+++PL ++ES+Q A + AGG + +R E +PI+ L + G Sbjct: 584 GQLVKVADQVYVIPLLTIVESIQINIASVKHAAGGIELYRLREENIPILRLQDELAM-GR 642 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 + ++ ++S G R LLVD L+ Q QVV+K+LESNY KV GIS ATILGDGSV+L Sbjct: 643 SGGLEKRLLCFVESAGHRVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSL 702 Query: 634 IVDVSALQA 642 I+D+ L A Sbjct: 703 ILDIPGLIA 711 Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 46/112 (41%), Positives = 63/112 (56%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPAQVDIEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD 112 + E TH +E LD R + QL I+ L++ D+++ LD+ +Q + D Sbjct: 61 EISEFTHAVETYLDLIRTQKKQLTPQGIDTLLKSCDVIRNMLDSREQQTDID 112 >UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KM54_SHEWM Length = 677 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 202/402 (50%), Positives = 283/402 (70%), Gaps = 5/402 (1%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT---SMGQLQRN 313 ++ E SIRV++EK+D LIN+VGELVITQ+ML Q + D ++ L++ + QL + Sbjct: 277 KTPEGGSIRVSIEKIDLLINMVGELVITQAMLGQIGQQ-DTIDEESLLSMKQGLEQLASH 335 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 RDLQESVM IRM+P+ + F+R+PRLVRD+ +LGKQVEL L G TELDK+++E+I+DP Sbjct: 336 TRDLQESVMQIRMLPISFAFNRFPRLVRDIGQQLGKQVELILKGEDTELDKTVMEKIVDP 395 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 + HLVRNSLDHG+E PE R++ GK G++ L+A HQGGNI IE+ DDGAGL+ + I K Sbjct: 396 MVHLVRNSLDHGLETPEVRVSKGKPEQGSITLNAFHQGGNIIIEIIDDGAGLDTQLIHKK 455 Query: 434 AASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +GL T E +S+D + LIF GFSTAE V+D+SGRGVGMDVV+RNI ++ G +E++ Sbjct: 456 AIDKGLVTEDEELSEDAIHQLIFKAGFSTAEAVSDLSGRGVGMDVVRRNIHELNGTIELK 515 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S + G+ I LPLTLAILDG VRV +++PL ++ ESLQ E ++ ++ ++ Sbjct: 516 STKDKGSRFTIRLPLTLAILDGQLVRVGQHTYVVPLVSIHESLQVEEQRINRISENHELV 575 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 +R EYLP+V++++ F E G+V+++ S + LLVD+L+ Q QVV+K+LE Sbjct: 576 RLREEYLPVVKVFQEFGHDADFQEIRDGLVMVVDSNNEKIGLLVDELLSQQQVVIKSLED 635 Query: 613 NYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 NY KVPG+S ATILGDG+VALI+D+S L + M AA Sbjct: 636 NYSKVPGVSGATILGDGTVALIIDISGLVTLAGIANMKEHAA 677 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 52/104 (50%), Positives = 71/104 (68%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+S F Q FF+E+ E LA ME LL L+ PD E +N IFRAAHSIKGG+ TFGF+ Sbjct: 1 MEIDLSQFSQVFFEESLEGLASMESELLKLEVNEPDDESINTIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA 104 + + THL+E LLDE R G Q+ TD ++ L + D+++ +DA Sbjct: 61 QVADYTHLLETLLDEIRDGRRQMTTDHQDMLLLSVDLLRNMIDA 104 >UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXP0_9BACT Length = 606 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 235/641 (36%), Positives = 374/641 (58%), Gaps = 63/641 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F E+ + L +E +L L+ + + +N IFR HS KG AG G + Sbjct: 20 MDDPEIVKEFLTESGDHLESVESQILQLEENPDNTDIINTIFRPIHSTKGSAGFLGLKDM 79 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 +H +E LLDEAR+G +++ II + E DI++ + E S + + A Sbjct: 80 GTVSHELETLLDEARKGNLKITPLIIEILYEGVDILKRLRGLVAKKVEKIDVSDEIVDYA 139 Query: 123 LRQLALEAKGETPSAVT-RLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 P V + ++V + + S+ Q I++ + GE+ Sbjct: 140 ------------PVIVKIKNALVGQKATESAPSKPQHLGEILVEK---GEI--------- 175 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 T D+ K + + I E ++E +T ET++ + LK Sbjct: 176 --TEDDLDKALEEQEKLQQKKIGE--------IIVEKGIVTKETIDSA--------LKTL 217 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 AP S +++V ++K+D L+NLVGELVI +++ + ++ Sbjct: 218 PATAPV-------------SETVKVDIQKIDSLVNLVGELVIANALIKDLLENTNSTSNK 264 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 + I+ +G++ +D+Q+ VMSIRM+P++ F + RLVRD++ K GK+V+L + G TE Sbjct: 265 N-ISHLGKI---VKDIQDQVMSIRMVPIKSTFQKMSRLVRDVSKKAGKKVKLEVSGEETE 320 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDKS+IE I DPL H++RNS+DHGIE E+R+AAGK ++G++ L A H+GGNI IE+ DD Sbjct: 321 LDKSVIESIGDPLVHILRNSVDHGIEPEEERIAAGKPALGHVYLDAFHKGGNIFIEIRDD 380 Query: 422 GAGLNRERILAKAASQGLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G GL ++++L KA +G+ +SEN +++ ++ LIFA GFSTAE++TD+SGRGVGMDVVK Sbjct: 381 GRGLRKDKLLKKAIEKGI-MSENATLTEQQIFGLIFAAGFSTAEKITDISGRGVGMDVVK 439 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 +NI+++ G VEI S++G GT I I LPLT+AI+DGM V+V ++ +I+P+ ++ ES++P++ Sbjct: 440 KNIERLRGKVEISSEEGKGTKISIKLPLTMAIIDGMIVQVGNQKYIVPMLSIEESIRPKK 499 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 D+ + V+ VRG LP+V L + +NV K + I++I++S G+R +LVD L Sbjct: 500 DDISTIQQRGEVINVRGNILPMVRLHQWYNVEPKKYAPWEAIILIVESEGQRCGILVDDL 559 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 IGQ Q+V+K L +R V G+S + ILGDG V LI+DV + Sbjct: 560 IGQQQIVIKRLGEQFRNVKGVSGSAILGDGRVGLILDVGGI 600 >UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Tax=Zymomonas mobilis RepID=C8WD70_ZYMMN Length = 776 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 209/461 (45%), Positives = 306/461 (66%), Gaps = 49/461 (10%) Query: 216 IEADQITFETVEVS--PKISTPPVLKLAAEQAPTGRVERE-------------------- 253 IEA + ET + + P TPP K PT +VE Sbjct: 322 IEAPKGDKETTKAAEKPAAKTPPASK------PTAKVEAAKKPAAPAPAAAPTKAPPQPP 375 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR--------SSELDPVNHGDLIT 305 ++ + +IRV ++K+D+L+NLVGELVITQ+MLAQR SSEL ++H Sbjct: 376 RSAAPAMAQTIRVDLDKLDRLVNLVGELVITQAMLAQRLTDQGLSGSSELTDLDH----- 430 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 R+LQ+S MSIR PM+ VFSR PR++R+L G+ GK+V L ++G TE+DK+ Sbjct: 431 -------LTRELQDSAMSIRAQPMKTVFSRVPRIIRELEGETGKKVRLDVIGEMTEVDKT 483 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++ERI +PLTHL+RN++DHG+E PE+R+AAGK G + L+AEH+ G I I ++DDG G+ Sbjct: 484 VVERIGEPLTHLIRNAVDHGLETPEERVAAGKPQEGVVTLAAEHRSGRIIIRISDDGKGM 543 Query: 426 NRERILAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 NR RIL KA +G+ + + +SDD++ LIFAPGFSTA +VT+VSGRGVGMDVV++N+Q Sbjct: 544 NRARILEKAIEKGIVSPDQTLSDDDIDNLIFAPGFSTAAKVTNVSGRGVGMDVVRKNVQA 603 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG + I S+ G G+T + LPLTLA+LDGM V+V D+ F++PL ++ESLQP E ++ Sbjct: 604 LGGRISINSRPGFGSTFTLSLPLTLAVLDGMIVQVGDQTFVIPLGHIVESLQPNEGEISG 663 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 + E++L VRG Y+PI + + +V A+ + + ++++++S G + L+VDQ++ Q Q Sbjct: 664 IGTTEKLLNVRGAYVPIQSIGRELSVENAELDPFKSVLIVVESDGGQAVLMVDQILDQRQ 723 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 VVVK+LE+NY+ + G++ ATILGDG VALI+DV +L A R Sbjct: 724 VVVKSLEANYQAIAGLAGATILGDGRVALILDVDSLVARWR 764 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M + FF E +E LA+ME + + D E +N IFRA HSIKGGAG FGF L Sbjct: 1 MSFDEIQNIFFQECEEGLANMEACFSLCRDGVQDDETINTIFRAVHSIKGGAGAFGFEQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H E LLD+ R G + L D+++ + D++ + + A S E D I Sbjct: 61 RSFAHHYETLLDKLRNGVLTLTPDLLSTLMAAFDMLSDHVAA--ASGERDMPDDSGIMDR 118 Query: 123 LRQLALEAKGETPSA 137 L E GE PS+ Sbjct: 119 LTAAMEEGGGEPPSS 133 >UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Tax=Alphaproteobacteria RepID=B2IGA2_BEII9 Length = 747 Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/389 (49%), Positives = 277/389 (71%), Gaps = 2/389 (0%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 TT +IRV +++VD+LI+LVGELVI Q+MLAQ +E ++ T + +L++ Sbjct: 321 NTTAGLSPATIRVDLDRVDRLIDLVGELVINQAMLAQSVTEAGLARATNIATGLDELEQL 380 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 R++Q+SVM+IR P++ VF R PRLVR++A GK V L G +TE+DK++IER+ DP Sbjct: 381 TREIQDSVMAIRAQPVKSVFQRMPRLVREVAAMTGKSVRLVTEGENTEVDKTVIERLTDP 440 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 LTH++RN++DHG+E PEKRLAAGK G + L A H+ G I IE+ DDGAG+NR R+ Sbjct: 441 LTHMIRNAIDHGLETPEKRLAAGKPEEGTVHLCALHRSGRIVIEIADDGAGINRPRVKQI 500 Query: 434 AASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +GL ++ ++DDE+ LIF PGFSTA ++D+SGRGVGMDVV+R+IQ +GG + I Sbjct: 501 AIDKGLISADVTLTDDEIDNLIFLPGFSTAATISDISGRGVGMDVVRRSIQALGGRISIS 560 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G G+T + LPLTLA+LDGM V VAD+ ++PL A++E+LQP+ D+H G RV+ Sbjct: 561 SRPGQGSTFTMSLPLTLAVLDGMVVSVADQTLVVPLTAIVETLQPKSTDVHGFGGAARVI 620 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLE 611 +R ++ P++++ + + +V+++++ GG R ALLVD + GQ QVV+K+LE Sbjct: 621 AIRDQFTPLIDVGRELAYRRVPADPLASVVILVETEGGVRNALLVDAIQGQRQVVIKSLE 680 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSAL 640 +NYR VPGI+AATILGDG VALI+DV ++ Sbjct: 681 ANYRHVPGIAAATILGDGRVALILDVESI 709 Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/117 (38%), Positives = 63/117 (53%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 QTFF E +E LA++E LL +Q D E +NA+FRA HSIKGGAG F L +H+ Sbjct: 9 QTFFQECEEQLAELENGLLAIQDGDKDPETVNAVFRAVHSIKGGAGAFSLDDLVRFSHVF 68 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 E LD+ R G + N D++ L D++ + + A + DA I + L L Sbjct: 69 ETTLDDLRAGVLAPNADVLKTLLRAADMLADLVRAARDGGTVDAGRSQAIIEDLAAL 125 >UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobacteria RepID=CHEA_RHIME Length = 758 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 189/391 (48%), Positives = 284/391 (72%), Gaps = 2/391 (0%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + +IRV +++VD+LINLVGELVI Q+ML+Q E D + + +LQ+ R++Q+S Sbjct: 358 TPTIRVDLDRVDRLINLVGELVINQAMLSQSVIENDTNGTSSINMGLEELQQLTREIQDS 417 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM+IR P++ VF R R+VR++A GK V L G +TE+DK++I+++ +PLTH++RN Sbjct: 418 VMAIRAQPVKPVFQRMSRIVREIADMTGKSVRLITEGENTEVDKTVIDKLAEPLTHMIRN 477 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHG+E PEKR+AAGKN G + L+A+H+ G I IE+ DDGAG+NRE++ KA L Sbjct: 478 AVDHGLETPEKRVAAGKNPEGTVRLTAKHRSGRIVIELADDGAGINREKVRQKAIDNDLI 537 Query: 441 VSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 ++ N+SD+EV LIF GFSTA++++D+SGRGVGMDVVKR+IQ +GG + I SK G G+ Sbjct: 538 AADANLSDEEVDNLIFHAGFSTADKISDISGRGVGMDVVKRSIQALGGRINISSKPGQGS 597 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 + LPLTLA+LDGM V VA++ ++PL A++E+LQP + +H +R++ +R + Sbjct: 598 IFTMSLPLTLAVLDGMVVTVANQTLVVPLTAIVETLQPEASAIHSFGSSQRLISIRDSFC 657 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 P+V++ ++ N GA+ +G+ ++++S GG + AL+VD + GQ QVV+K+LE+NY VP Sbjct: 658 PLVDVGRILNFRGAQANPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVP 717 Query: 619 GISAATILGDGSVALIVDVSALQAINREQRM 649 GI+AATILGDG VALI+DV A+ A +R Q + Sbjct: 718 GIAAATILGDGRVALILDVDAIVAASRGQSL 748 Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 3/135 (2%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + FF E +E LA++E LL L D E +NA+FRA HSIKGGAG FG L Sbjct: 1 MDMNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H+ E LD R ++ N D++ + L + D++ + +A + D A + + Sbjct: 61 VSFAHVFETTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIKE 120 Query: 123 LRQLALEAKGETPSA 137 L L A GE P A Sbjct: 121 LEAL---ANGELPQA 132 >UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GS07_9BURK Length = 659 Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust. Identities = 241/663 (36%), Positives = 368/663 (55%), Gaps = 34/663 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +D+ FF EA +LLAD+E +L L+ D E LNA FRA H+IKG AG FGF+ + Sbjct: 5 IDLDSIKSVFFAEAYQLLADVENLILQLEKNPEDLELLNAAFRAIHTIKGSAGVFGFANI 64 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H +E +LD R E+Q ++ + NL L D + +++ ++ DAA D C A Sbjct: 65 THFVHDLETVLDRVRNQELQFDSALGNLVLACCDQVHTLVESLERG--VDAADLDQQCVA 122 Query: 123 --------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 L+ L+ + S T ++ D P I K+G+ Sbjct: 123 EQAGLTGQLKAYLLDEPADAVSTGTSQWLIQVELGVDTFRDGFDPYSIFNYLAKSGKFKS 182 Query: 175 LEEELGHLTTLTDVVKGADSLS--AILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 +E +L H+ L + + L AI + +E +I F+ E +++ + V+ + Sbjct: 183 MEPQLQHIPKLGEFDPESCFLGFKAIYETEQSEAEILDAFEFLPEECKVSVTSAAVAVPV 242 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 + +EQ + K +++IRV +K+D LINLVGELVI + +++ Sbjct: 243 TEEK--NTVSEQVRELKTAARKAPVKAATSTIRVQSDKLDALINLVGELVIANAGTVEQA 300 Query: 293 SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 + + ++G L RD + +RM+ + F R+ R+VRD A LGK+V+ Sbjct: 301 RKSQSFALLEATCAVGALIEEIRD---GALGLRMVEIGECFQRFQRVVRDTAQSLGKEVD 357 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 L + G TELDKS++E+I DPL HLVRN++DHG+E P++RL AGK L L+A H GG Sbjct: 358 LIIQGEETELDKSVVEKISDPLMHLVRNAMDHGLETPDERLGAGKQDKAKLTLNAYHDGG 417 Query: 413 NICIEVTDDGAGLNRERILAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 +I IEV+D+G GL E+I KA +G+ + ++++S+ ++ MLIFAPGFSTA VTD+SGR Sbjct: 418 HIVIEVSDNGRGLVHEKIRTKAIEKGIVSATQSLSESDINMLIFAPGFSTAAAVTDISGR 477 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVVKRNI+ + G V ++SK+G GTT I LPLTLAI+DG + V + V+++PL V Sbjct: 478 GVGMDVVKRNIEALRGTVNVRSKEGVGTTFEIRLPLTLAIIDGFQIAVGNSVYVIPLAYV 537 Query: 532 MESLQPREADLHPLAGGERVL----EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 E ++ L GG + ++RGEYLP + L KVF K + ++++ Sbjct: 538 RECVE-----LTGQGGGSDAVDLSYDLRGEYLPCIRLRKVFGETSDKPKREN--IIVVSH 590 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL-----QA 642 GG + ++ D+L+G+ Q V+K L + P +S TI+G+G VALIVD+ L Q+ Sbjct: 591 GGLKVGIVADRLLGESQTVIKPLGGLFEGNPAVSGGTIMGNGEVALIVDIPKLISEVGQS 650 Query: 643 INR 645 I R Sbjct: 651 ITR 653 >UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Tax=Archaeoglobus RepID=D2RE79_ARCPR Length = 626 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 243/652 (37%), Positives = 376/652 (57%), Gaps = 43/652 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S++ Q F E E + M Q+ + + E D E LN IFR AH+IKG AG G+ L Sbjct: 1 MDLSEYKQEFLQEVKEYIDVMNQNFI--KVEKGDLEALNEIFRVAHTIKGMAGFMGYKKL 58 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E+ + + R G + + D+I++ L+ D ++E ++ +S++ D D + + Sbjct: 59 ELLCHRLESAMGKVRDGVVNVTEDLIDVMLKAVDKIEEIVEKI-ESEDNDDVDIDEVISS 117 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L + GE S+ +S+P D + + +K+ L+ E L + Sbjct: 118 LESII----GEVRSSKCEKK---ESKPFDNANLRVDVKLADDCVMKSVRATLILESLKDV 170 Query: 183 TTLTDVVKGADSL---------SAILPGD-IAEDDITAVLCFVIEADQITFETVEVSPKI 232 + V D++ S + GD A +D+ + + V D + + + K+ Sbjct: 171 CEVIGVDPDEDAMDSDDFDGTFSIYVKGDRKAVEDVMSKVGEVERFDIVEIKQQRIEKKV 230 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 P V EQ +E+ R NES IRV +E++D ++NLVGELVI + L Q + Sbjct: 231 EKPVV----KEQM------KEEKLRKNES--IRVNIEQLDTIMNLVGELVIGKGRLIQIA 278 Query: 293 SELD-PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + D P +L ++ + + LQ+ +M IRM+ +E VFS++PR+VRDLA KLGK+V Sbjct: 279 QDYDIP----ELKEAVSVMDKAITSLQDEIMRIRMVKVERVFSKFPRMVRDLARKLGKKV 334 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 EL + G TELD+++++ I DPL H++RN++DHGIE PE+R AGK+ VG ++LSA + Sbjct: 335 ELIIEGQDTELDRTVLDEITDPLIHIIRNAVDHGIETPEERKKAGKSEVGKIVLSARREK 394 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDV 468 N+ IE+ DDG G++ E++ KA +GL +E+MS+DE+ MLIFAPGFST ++ T+V Sbjct: 395 NNVVIEIEDDGRGIDVEKVKKKAIEKGLITPAEAESMSEDEIKMLIFAPGFSTKDKATEV 454 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVGMDVVK ++K+GG+V+I S++G GT I I LP T+AI + +RV +E F +PL Sbjct: 455 SGRGVGMDVVKTRVEKLGGNVKIYSEKGKGTKIVITLPPTVAITKALLIRVGNEDFAIPL 514 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 ++V+E++ E + L G L VR +P L ++FN+ K E GI+V + Sbjct: 515 SSVVEAIYVTEENYKVLHGTP-FLYVRNNLIPAFRLRELFNIKNGKAEREVGIIV--ERE 571 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 G R AL+ D + Q ++V+K L S KV G S TILGDG V I+DVS L Sbjct: 572 GDRIALIADAITDQLEIVIKPLTSFLSKVRGFSGITILGDGRVVPIIDVSTL 623 >UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepID=CHEA_BACSU Length = 672 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 236/681 (34%), Positives = 394/681 (57%), Gaps = 54/681 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + F DE+ E L + LL+L+ + D + ++ IFRAAH++KG + T G++ L Sbjct: 1 MDMNQYLDVFIDESKEHLQTCNEKLLLLEKDPTDLQLVHDIFRAAHTLKGMSATMGYTDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY------KQSQEPDAASF 116 THL+EN+LD R G+M++ +D +++ E D ++ + + K+ +A Sbjct: 61 AHLTHLLENVLDAIRNGDMEVTSDWLDILFEALDHLETMVQSIIDGGDGKRDISEVSAKL 120 Query: 117 DYICQALRQLALEAKGETPSAVTRL-------SVVAKSEPQDEQSRSQSPRRIILSR--- 166 D A E S+ + +V+ ++E EQ + +I L+ Sbjct: 121 DVNGAHAESAASAEPAEAQSSASDWEYDEFERTVIQEAE---EQGFKRYEIKISLNENCM 177 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLS----------AILPGDIAEDDITAVLCFVI 216 LKA V ++ E+L + + + A+ L L AED I ++ V Sbjct: 178 LKAVRVYMVFEKLNEVGEVAKTIPSAEVLETEDFGTDFQVCFLTHQSAED-IEQLINGVS 236 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRV----EREKTTRSNE---------STS 263 E + + E ++ +P S + E +P V E++K N+ S + Sbjct: 237 EIEHV--EVIQGAPLTSAEKPEESKQEDSPAAAVPAKQEKQKQPAKNDEQAKHSAGGSKT 294 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 IRV ++++D L+NL ELVI + L Q + EL+ H +L ++ ++ R + DLQ +++ Sbjct: 295 IRVNIDRLDSLMNLFEELVIDRGRLEQIAKELE---HNELTETVERMTRISGDLQSIILN 351 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM+P+E VF+R+PR++R L +L K++EL+++G+ TELD+++I+ I DPL HL+RNS+D Sbjct: 352 MRMVPVETVFNRFPRMIRQLQKELNKKIELSIIGAETELDRTVIDEIGDPLVHLIRNSID 411 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-- 441 HGIE PE RL GK G ++L A H G ++ IEV DDGAGLNR++IL KA +G+ Sbjct: 412 HGIEAPETRLQKGKPESGKVVLKAYHSGNHVFIEVEDDGAGLNRKKILEKALERGVITEK 471 Query: 442 -SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 +E + D+++ LIFAPGFSTA+Q++D+SGRGVG+DVVK ++ +GG V ++S +G G+ Sbjct: 472 EAETLEDNQIYELIFAPGFSTADQISDISGRGVGLDVVKNKLESLGGSVSVKSAEGQGSL 531 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER-VLEVRGEYL 559 I LPLTL+I+ + +++ +E F +P+++++E+ D+ L +R V++ RG + Sbjct: 532 FSIQLPLTLSIISVLLIKLEEETFAIPISSIIETAVIDRKDI--LQTHDREVIDFRGHIV 589 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+V L + F + + +A Q +++++ G + A +VD IGQ +VV+K+L V Sbjct: 590 PVVYLKEEFKIEDTRKDAEQLHIIVVKKGDKPTAFVVDSFIGQQEVVLKSLGDYLTNVFA 649 Query: 620 ISAATILGDGSVALIVDVSAL 640 IS ATILGDG VALI+D +AL Sbjct: 650 ISGATILGDGEVALIIDCNAL 670 >UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 Tax=Clostridiales RepID=A1HN15_9FIRM Length = 677 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 250/688 (36%), Positives = 383/688 (55%), Gaps = 62/688 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDIS + F +E E L + + LL L+ + + L+ IFR+AH+IKG + T GF+ + Sbjct: 1 MDISQYLGIFLEETREHLQTLNRCLLELEHDPGNLAVLDEIFRSAHTIKGMSATMGFTAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH MEN+LD R+ ++ N++II+ + D +++ ++ + E S D I Sbjct: 61 AELTHEMENILDLLRKSVLKANSEIIDALFKCVDTLEQSVEQVAANGE---TSLD-IKPL 116 Query: 123 LRQLALEAKGE------TPSAVTRLSVVA----KSEPQDEQSRSQSPRRIILSRLKAGEV 172 + L AKGE PS+V V A +E + Q+ + R +++ E Sbjct: 117 VTTLTALAKGEMFTDSKAPSSVAARPVSAIDLNDTEVKIIQAANSQGLRAYEVQVRLREG 176 Query: 173 DLLEEELGH-----LTTLTDVVKGAD------------SLSAILPGDIAEDDITAVLCFV 215 LL+ + L TL DV+K S ++ D D I L + Sbjct: 177 CLLKSARAYMVMSTLDTLGDVIKSIPPAEELEKENFDLSFQTVVITDAEPDKIKQALLSI 236 Query: 216 IEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV------EREKTTRSNEST------- 262 E + + E +P++ + A + R+ E EKT +T Sbjct: 237 AEIESVNVILCEATPRLEKAAAVA-GQSDAESRRIGGKHDEETEKTVNPGLNTTADKKVK 295 Query: 263 ---SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH--GDLITSMGQLQRNARDL 317 S+RV +EK+D L+NLVGELVI ++ L Q + H DL+ ++ Q+ R DL Sbjct: 296 GGQSVRVDIEKLDTLLNLVGELVINKTRLEQIG-----ITHRLPDLVETIEQMDRVTTDL 350 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q VM +RM+P+ VF+R+PR++RDL+ +L K+V L + G TELD+++I+ I DPL HL Sbjct: 351 QAVVMKVRMVPVGQVFNRFPRMIRDLSRELNKEVNLIIQGEETELDRTVIDEIGDPLVHL 410 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RN++DHGIE PE+R A GKN VG + L A H+G N+ I V DDG G+N E + KA + Sbjct: 411 LRNAIDHGIESPEEREAKGKNPVGEIRLIARHEGNNVIIVVEDDGRGINPETVKQKAVQK 470 Query: 438 GLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 GL ++ M E LIF PGFSTA+ +TDVSGRGVGMD VK I+ +GG V++++K Sbjct: 471 GLITQAEADKMDVAEAIRLIFLPGFSTADNITDVSGRGVGMDAVKTKIESLGGMVDVETK 530 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G+ +I LPLTLAI+ + V+V +E++ +PL+++ +++ D+ + E +L + Sbjct: 531 VNEGSKFKIRLPLTLAIIQALLVKVGEEIYAIPLSSIDSTIKVGLPDIKTIQNHEVIL-L 589 Query: 555 RGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 RG+ +PIV L KV NV G K + + VVI+ G +R ++VD LIGQ ++V+K+L Sbjct: 590 RGQIIPIVRLAKVLNVPETGQKNQE-ELFVVIIHMGEQRAGVVVDTLIGQQEIVIKSLGK 648 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + I+ ATILG+G VALI+DV +L Sbjct: 649 LLAGIKVIAGATILGNGQVALILDVGSL 676 >UniRef50_P21813 Chemotaxis protein cheA (Fragment) n=25 Tax=Proteobacteria RepID=CHEA_ENTAE Length = 226 Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust. Identities = 186/227 (81%), Positives = 208/227 (91%), Gaps = 1/227 (0%) Query: 428 ERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 E+ILAKAA+QGL V++ MSD+EV MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ+MGG Sbjct: 1 EKILAKAAAQGLAVTDTMSDEEVGMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQEMGG 60 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 HVEI S+ G GT+IRILLPLTLAILDGMSV+V +EVFILPLNAVMESLQP+ DLHP+AG Sbjct: 61 HVEIHSRAGKGTSIRILLPLTLAILDGMSVKVNEEVFILPLNAVMESLQPQREDLHPMAG 120 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 GER+L+VRGEYLP+VEL++VF AGAKTEATQGIVVILQS GRR ALLVDQLIGQHQ V Sbjct: 121 GERMLQVRGEYLPLVELYRVFECAGAKTEATQGIVVILQSAGRRNALLVDQLIGQHQ-CV 179 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 KNLE+NYRKVPGISAATILGDGSVALIVDVSALQ +NRE+ ++ AA Sbjct: 180 KNLETNYRKVPGISAATILGDGSVALIVDVSALQMLNREKLLSAAAA 226 >UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR38_9RHOB Length = 698 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 234/651 (35%), Positives = 361/651 (55%), Gaps = 43/651 (6%) Query: 27 LLVLQPE-APDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNT 85 L +LQP+ PD E +N +FRA HSIKGGA +F + + H E +LDE R G++ ++ Sbjct: 29 LELLQPDHEPDPETINRMFRAVHSIKGGAASFSLDAITQYAHAFETILDELRSGKLTMSR 88 Query: 86 DIINLFLETKDIMQEQLDAYKQSQEPDAASF------------------------DYICQ 121 +II +F D + + + + PD + D I + Sbjct: 89 EIIPVFYRGADRLTDFIALGEAGSVPDVSELANDISEITALSSDSHQIGEVEFGDDCIAE 148 Query: 122 ALR-QLALEAKGETPSAVTRLSVVAKSEPQDE-QSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L+ A G S + K +P S P ++ G VD+ L Sbjct: 149 FVPVALSFAADGADLSDTEHGNYSIKFKPTKALYSNGHEPVQLFRELETLGSVDI-SFSL 207 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI------S 233 G DV S +L E ++ V F + +I E ++ I Sbjct: 208 GGAAAW-DVNDPDISWHILLSSGCLESEVYEVFEFAHDLAEIQIEILKTEKPIFESSERP 266 Query: 234 TPPVLKLAAEQAPTGRVEREKTT----RSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 P + +L E ++T+ +S + ++RV +E VD+LIN+VGELVITQ+++ Sbjct: 267 APALSQLEINAGGLANAEEKETSPEKAKSAQKATVRVDLELVDELINMVGELVITQAVMT 326 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 Q +E + L T++ + R +QE VM IR ++ +F R R+VR+ A GK Sbjct: 327 QSITESELSVSRQLATTLDDFKTLTRTIQERVMGIRAQSVKPLFQRMGRIVRETAQIAGK 386 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 +V G TE+D+++IER++DPLTH++RN++DHG+E ++R+ GK G++ LSA H Sbjct: 387 EVRFITEGEDTEVDRTVIERLVDPLTHILRNAIDHGLEHTDRRIEVGKVPNGSVKLSAAH 446 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTD 467 + G + IEV DDG G+NRE++L+ A +GL VSE + D E+ L+F PGFSTA +T+ Sbjct: 447 RSGRVVIEVNDDGGGVNREKVLSSAIEKGL-VSETAKLGDAEIDRLLFLPGFSTASAITN 505 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVV I+++GG V I S G GTTI I LPLTLA+LDGM V VA++ ++P Sbjct: 506 LSGRGVGMDVVNSEIRRLGGRVSIISTPGQGTTISISLPLTLAVLDGMVVNVANQTMVVP 565 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 ++A+ E+++P + +H + R++ VR LPI++L +F + GI++I++ Sbjct: 566 ISAITETIRPEASKVHLIGPEARMISVRDLMLPIIDLGTIFGFEPERKLGQDGILLIVED 625 Query: 588 G-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 G ++AL VD ++ Q QVV+K+LESNY VP ++AATILGDG +ALIVD+ Sbjct: 626 DKGDQFALAVDHILDQRQVVIKSLESNYGHVPYVAAATILGDGQIALIVDL 676 >UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepID=Q3BR62_XANC5 Length = 669 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 262/678 (38%), Positives = 377/678 (55%), Gaps = 62/678 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ QTF E+ +LL DME+HLL + P + +NAIFRAAH+IKG G F L Sbjct: 1 MDMNQLMQTFLAESRDLLEDMERHLLEAERGEPSPDAVNAIFRAAHTIKGSGGLFDLPQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF-----D 117 TH++E++LD R + L++++I L L D + ++ D + Sbjct: 61 VGFTHVVESVLDLVRDEALSLSSELIGLLLVCCDHIHALVETAADPSHADPVALAAEAEP 120 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR------------SQSPRRIILS 165 + Q L A G T +AV + E Q R SP ++I + Sbjct: 121 LLAQLQTYLQRSACGVTAAAVAQ----GAPEKQSGYWRITLKLFADALRFGNSPLKLIRN 176 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLS--AILPGDIAEDDITAVLCFVIEADQITF 223 G V+ + ++ L D+ A+ L +L D I V FV E Sbjct: 177 LRSLGSVESITTDISQLPAFDDLDPEANYLGFQILLRSDADRAAIEEVFEFVRE--DCDL 234 Query: 224 ETVEV-SPK------------ISTP--PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAV 268 E V V +P TP P+ + + + GR + RS ++ SIRV Sbjct: 235 EIVSVPAPSDAAELLSAEAAASPTPNKPLAAVPSAASAPGRAAPDAAARSADARSIRVDA 294 Query: 269 EKVDQLINLVGELVI---TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 +K+D++I+LVGEL+I + S AQR+ + L+ S L D++ES + +R Sbjct: 295 DKLDRMIDLVGELIIAVSSTSANAQRTGD------AQLLESASILAGLVEDVRESALQLR 348 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 M+ + FSR+ R+V D+A +LGK + L + G TELDKS++E+I DPLTHLVRN++DHG Sbjct: 349 MVKIGGTFSRFQRVVHDVARELGKDIALVVAGEDTELDKSVVEKIGDPLTHLVRNAMDHG 408 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSEN 444 IE E R+A GK + G + L+A H G+I I++TDDG GLNR+RILAKA +GL Sbjct: 409 IEPAEVRVARGKPARGTVGLNAYHDSGSIVIQITDDGGGLNRDRILAKALERGLIEPGRQ 468 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 +SD +V +IF PGFSTAE+VT++SGRGVGMDVVKRNI + G VEI S G GTTI + Sbjct: 469 LSDRDVFAMIFEPGFSTAEKVTNLSGRGVGMDVVKRNITALRGTVEIDSTAGVGTTISVR 528 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQ--PREADLHPLAGGERVLEVRGEYLPIV 562 LPLTLAI++G V V VF++PL+ V E ++ P A + +++RG LP V Sbjct: 529 LPLTLAIINGFQVGVGKSVFVVPLDVVEECVEFTPDYASDY--------IDLRGSVLPYV 580 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L ++F + G KT + + IVVI Q G +R+ L+VD L+G+ Q V+K L + +V GIS Sbjct: 581 RLRELFAL-GGKTPSRESIVVIRQ-GAQRFGLVVDTLLGEWQTVIKPLSKVFAQVKGISG 638 Query: 623 ATILGDGSVALIVDVSAL 640 ++ILG G VALI+DV +L Sbjct: 639 SSILGSGDVALILDVPSL 656 >UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteobacteria RepID=B9L827_NAUPA Length = 834 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 252/704 (35%), Positives = 395/704 (56%), Gaps = 76/704 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 +I + + F EA E++ +M+Q L+ L+ D + LN IFR AH+IKG F L Sbjct: 3 EIQELLEDFLVEAFEMIEEMDQDLVELENSPDDLDLLNKIFRVAHTIKGSGSFLNFDKLT 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH ME +LD+AR+GE+ + +I+++ LE+ D M+ L+ + + + A D + Sbjct: 63 RLTHHMEAVLDKARKGELTITPEIMDVILESVDAMKGILEYIRDNGDDSAPDIDIEPIVV 122 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII-------LSRLKAGEVDL-- 174 R A+ G S+ + A++E E++ + +I+ ++ A E+DL Sbjct: 123 RLDAI-VNGSQASSKS-----AQTENTSEKNEGEKKPKIVGNINLDEITLENADEIDLDS 176 Query: 175 -----LEEELGHLTTLTD--------------VVKGAD--SLSAILPGDIAEDDITAVLC 213 L+ L HL L + ++ AD L ++ P ++ AVL Sbjct: 177 LSPEELDAVLEHLVELRNKKPKKVGNINLDEITLENADEIDLDSLTP-----EEADAVLE 231 Query: 214 FVIE-----ADQI----------------TFETVEVSPKISTPPVLK--LAAEQAPTGRV 250 ++E AD+ + ET + K P K L EQ + Sbjct: 232 HLVELRNKPADKTENKQTEEKDEKKDNAQSQETKKEESKNELTPAKKQELTNEQK---KK 288 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-LITSMGQ 309 E +K S +IRV V+++DQL+NL+GELV+ ++ L + ++++ G+ + + Q Sbjct: 289 EVKKAISSVAEQTIRVDVKRLDQLMNLIGELVLAKNRLIKIYNDVEERYEGEKFLEELNQ 348 Query: 310 LQRN----ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + + DLQ +VM RM+P+ VF+++PRLVRDL+ +LGK+V L + G TELDKS Sbjct: 349 VVSSISIVTTDLQIAVMKTRMLPIGKVFNKFPRLVRDLSRELGKKVRLIIEGEDTELDKS 408 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +IE I DPL H++RNS+DHGIE PE+R+ GK G + L A ++G I IE+ DDG G+ Sbjct: 409 IIEEIGDPLVHMIRNSVDHGIEPPEERVKLGKPEEGTVWLRAYNEGNMIVIEIKDDGRGM 468 Query: 426 NRERILAKAASQG-LTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + E + KA +G +T SE NMSD E MLIF PGFSTA +VT VSGRGVGMDVVK NI Sbjct: 469 DPEVLKRKAIEKGIITESEAANMSDKEAFMLIFKPGFSTAAKVTSVSGRGVGMDVVKTNI 528 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +K+ G +E+ S G G+T ++ +PLTLAI+ + V +++F +PL+ V+E+++ E D+ Sbjct: 529 EKLNGIIEVDSAPGKGSTFKLKIPLTLAIIQALLVASQEDLFAVPLSNVIETVRIVEEDI 588 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + + G+ VL++R E LP+V + +F + VVIL G + L+VD+ IGQ Sbjct: 589 YTIE-GKSVLKLREEVLPLVNMADIFEIEKVLEPEKYLYVVILGLGATKIGLIVDRFIGQ 647 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 ++V+K+L + +PGI+ ATI GDG V LI+DV +L + +E Sbjct: 648 EEIVIKSLGEFLKGIPGIAGATIRGDGRVTLIIDVGSLMRLAKE 691 >UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW48_HALOH Length = 655 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 230/655 (35%), Positives = 373/655 (56%), Gaps = 29/655 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 +++ Q FFDE+ E L + +++L L+ + + E +N +FRAAHS+KG A T GF L + Sbjct: 3 NNYLQMFFDESSEYLRILNENVLALEQDPENIELINEVFRAAHSLKGMAATMGFQYLTDL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH +EN+LD+ R G++ +N DII+L + D +++ ++ K E YI Sbjct: 63 THKIENILDKVRNGQLNINEDIIDLLFDGLDYIKQLVEDIKNEGEEATDVSAYIKDLENY 122 Query: 126 LALEA----KGETPSAVT-----RLSVVAKSEPQDEQSRSQSP--RRIILSRLKAGEVDL 174 + +E + +P ++ + + AK D + + +L ++ + Sbjct: 123 VDIEGVSLDEDSSPGDISFSDEEKKEIFAKMHESDNIYKVNVKLVKDCLLKNVRGFMILK 182 Query: 175 LEEELGHLTT---LTDVVKG---ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 EELG+L D ++ DS+S IL + +I L +++ D++ E + Sbjct: 183 NAEELGYLVKSKPTKDNIEDEDFGDSISLILVSKLNSSEIKKELGNIVDVDKVEIEVINN 242 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 S+ + + + + +++ T S ++RV + K+D L+N+VGEL+I ++ L Sbjct: 243 EFNESSEQQNTIKKVKPTSKKTSKKRLTSMEVSPTVRVDINKLDNLMNMVGELLINKTRL 302 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 + E + + D+I QL R +L VM IRM+P+ +F+R+PR+VRDL+ +L Sbjct: 303 EDLNIESEV--YQDIIQ---QLDRVTMELHHIVMQIRMVPIGGIFNRFPRMVRDLSKELN 357 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K+++L + G+ TELD+S+I+ ++DPL H++RN++DHGIE PE+R+ GK+ G ++L A Sbjct: 358 KEIDLIIEGAETELDRSIIDELVDPLIHILRNAVDHGIESPEERVKKGKDRRGTILLQAY 417 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQV 465 +G I IEV DDG G+ E + KA +GL E M D + LIF PGFST++ + Sbjct: 418 QKGSEIIIEVEDDGRGIEPEVLAEKAIEKGLVTLEEVEAMDDRDKLNLIFRPGFSTSKTI 477 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 TDVSGRGVGMDVVKR ++ + G + I+S GT I LPLTLAI + V+V +E+F Sbjct: 478 TDVSGRGVGMDVVKRVVESLDGQIFIESDVDVGTRFTISLPLTLAITQALMVKVNEEIFA 537 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV---AGAKTEATQGIV 582 +PLNA+ E+L D+ + G+ V+ +R +PIVE K N+ G + + V Sbjct: 538 IPLNAISETLTVTPDDIRQVR-GQDVIVLRDRTIPIVECSKQLNMDVEYGLYLKREEIPV 596 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 VI+ G R+ L+VD+L+ Q ++V+K+L S IS ATI+GDG VALI+DV Sbjct: 597 VIINQGDRQVGLIVDELLNQQEIVIKSLGSYLVDTKNISGATIVGDGDVALILDV 651 >UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Tax=Alphaproteobacteria RepID=B8GZ93_CAUCN Length = 762 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 188/386 (48%), Positives = 272/386 (70%), Gaps = 2/386 (0%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 IRV E++D+LI+LVGELVI Q+MLAQR E +L + +L++ R++Q+SVM+ Sbjct: 362 IRVDPERIDRLIDLVGELVINQAMLAQRVGEYGIAPSSNLAMGLDELEQLTREIQDSVMA 421 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IR P++ VF R PRLVR++A GKQ L + G +TE+DK++IER+ DP+TH++RN++D Sbjct: 422 IRAQPVKSVFQRMPRLVREVANMTGKQARLVMDGENTEVDKTVIERLSDPITHMLRNAID 481 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HG+E PE+R AAGKN G + L+A H+ G I IEV+DDG G+NRER+ A +GL + Sbjct: 482 HGLESPEERKAAGKNPEGVVRLAALHRSGRIVIEVSDDGKGINRERVFGIAVKKGLIAPD 541 Query: 444 -NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 ++D+E+ LIF PGFSTAE+++DVSGRGVGMDVVKR++Q +GG + I S+ G G+T Sbjct: 542 LQLTDEEIDNLIFLPGFSTAEKISDVSGRGVGMDVVKRSVQALGGRISISSRPGQGSTFT 601 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 + LPLTLA+LDGM V VA E ++PL A++ESL+P+ ++ PL VL VR ++P++ Sbjct: 602 LSLPLTLAVLDGMVVDVAGETLVVPLAAIVESLRPKPEEVRPLGPVGSVLAVRDSFVPLI 661 Query: 563 ELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 ++ T G+V++++ G R AL+ D + GQ QVV+K+LE NY++V G++ Sbjct: 662 DVGLTLGYREESPHPTDGVVLLVEGEDGSRAALVADAIHGQRQVVIKSLEQNYQQVEGVA 721 Query: 622 AATILGDGSVALIVDVSALQAINREQ 647 AATILGDG VALI+DV A + R + Sbjct: 722 AATILGDGRVALILDVDATINLRRRE 747 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/96 (43%), Positives = 57/96 (59%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 TFF E +ELLAD+E LL ++ A D E +NA+FRA HSIKGGAG FG L H+ E Sbjct: 10 TFFQECEELLADLEGGLLAMEEGAGDLETVNAVFRAVHSIKGGAGAFGLEPLVRFAHVFE 69 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 LLD R G + ++ + L DI+ + + A + Sbjct: 70 TLLDAVRAGSVPNTVELAAVLLRASDILADHVSAAR 105 >UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5B1_PELCD Length = 887 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 254/666 (38%), Positives = 363/666 (54%), Gaps = 61/666 (9%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M M IS + + F EADELL ++EQ LL + DAE + ++R HS KG +G F F Sbjct: 244 MQMLISPEMLERFVQEADELLQNVEQGLLAWSDDKLDAEGIAELYRNVHSFKGNSGFFSF 303 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 +++ TH ME LLD A+ G N L D ++ + Q + D + Sbjct: 304 GDMEKLTHQMETLLDIAKEGGEFSNGSPAEALLGCLDALRGAVADISQGGKGVIEEVDEL 363 Query: 120 CQALRQLALEAKGET----------PSAVTRLSVV-AKSEPQDEQSRSQSPRRIILSRLK 168 + L + ET P R S V A+ +D+ + S S R++ Sbjct: 364 LKQLVRYVPTEDAETTPEDSEPARIPEDCLRESAVPAEDLGEDDDTSSASGSRLL----- 418 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 GE+ L+EE L AD G+IAE VIE + + V Sbjct: 419 -GEI-LVEEGL------------ADE------GEIAE---------VIEEQRKPLGELLV 449 Query: 229 SPKISTPPVLKLAAE-QAPTGRVEREKTTRSNESTS-----------IRVAVEKVDQLIN 276 P L A E Q +G+ + T S IRV + K+D LIN Sbjct: 450 ERGKVGPEQLAKALEIQKQSGQAKSSGGTNGAAMPSKGKPPAMNRQDIRVDLAKLDDLIN 509 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 L+GE+VI ++ML RS +L+ + + + Q+ + RDLQE M IRM+P+ +F R Sbjct: 510 LIGEMVIAENMLL-RSPDLEGLELDNFSKAAQQMSKIVRDLQEMAMIIRMIPVSGLFRRM 568 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 RLV DL+ K GK+V+L L G TE+DK++IE+I DPL HL+RNSLDHG+E P +RLAAG Sbjct: 569 IRLVHDLSVKSGKKVDLQLFGQETEVDKTVIEQITDPLVHLLRNSLDHGLETPAERLAAG 628 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLI 454 K G + LSA HQ G + IEV DDG GLNR++IL+KA +GL + ++SD E+ LI Sbjct: 629 KPEKGVVKLSARHQEGEVWIEVQDDGRGLNRDKILSKAIGKGLVAGDGSHLSDKEIYNLI 688 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F PGFSTA++VTDVSGRGVGMDVVK+N++K+ G +E+QS G G+ I + +PLTLAI+DG Sbjct: 689 FQPGFSTADKVTDVSGRGVGMDVVKKNLEKIKGKIEVQSTPGQGSRITLRIPLTLAIIDG 748 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 M VR+ + I+PL A+ E +P D+ + G+ + +VR + P+V L ++ Sbjct: 749 MLVRIGESRCIVPLLAIREIFRPTTDDITVMPDGQELAKVRESFHPVVYLDRLLEEPADY 808 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 G++++L+ + LLVD+++GQ Q V+K L V S TILG+G V LI Sbjct: 809 NAIEDGVLIVLEYQDKFLCLLVDEILGQQQTVIKGLSDYIGNVRIASGCTILGNGEVCLI 868 Query: 635 VDVSAL 640 +DV+ L Sbjct: 869 LDVATL 874 Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%) Query: 2 SMDISDFYQTFFDEADELL------ADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 S+D+ + QT + E + A+ + +V Q E +NAIFR HS+KG AG Sbjct: 60 SLDMPCWLQTGYVEGGDQSCPHASSAEECRSCVVFQSINGHGETMNAIFRLFHSMKGSAG 119 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ 107 + + H E+LLD R G++Q+ + + ++ D +E +D +Q Sbjct: 120 FLELNHIAHVAHAAESLLDMIRSGKIQMIPEHVQFLCQSCDFAKEAMDHVEQ 171 >UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0S0_HALOH Length = 699 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 184/403 (45%), Positives = 280/403 (69%), Gaps = 1/403 (0%) Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 K++ EQ ++ K+ E ++I+V K++ L+N + ELVI Q+ + + Sbjct: 291 KVSREQVQRVVYDQHKSRAVKEKSTIKVDTHKLESLMNSMAELVIAQAKVRELVIHRTDR 350 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + +++T++ + + R+LQE +M +RM+P+ F R+ RLVRDL+ + GK++ L + G Sbjct: 351 SENEIMTALNSVDKRIRNLQEDIMKVRMVPIGNTFLRFKRLVRDLSREQGKEINLEIRGK 410 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELDK +IERI DPL H++RNS+DHGIE PE+R A GKN VG + L++ HQ GNI IEV Sbjct: 411 ETELDKIVIERIYDPLKHMIRNSVDHGIEPPEEREALGKNRVGTISLNSYHQEGNIIIEV 470 Query: 419 TDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDG GL++E+IL KA ++G+ + +++ + LIF PG ST+E+VT+ SGRGVGMDV Sbjct: 471 ADDGRGLDKEKILDKAINRGVVDEDQELTEQGIYRLIFEPGLSTSEEVTETSGRGVGMDV 530 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ NI+++ G + I S G GT +I LPLTLAI+DGM+V+V DE FI+PLN+++E ++P Sbjct: 531 VRNNIEQLRGTINIFSNPGEGTRFKIKLPLTLAIIDGMNVKVGDEQFIIPLNSIVEFIRP 590 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 + + G V++VR EY+ + L+K+FN+ G+KT+ T+GI+VILQ R+ LLVD Sbjct: 591 LPEHIKTVNGKGEVVKVRDEYITLSRLYKLFNLKGSKTDPTEGILVILQDENRKLCLLVD 650 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +++GQ Q VVK++E NY + GI+ ATI+GDG VA+I+DVS + Sbjct: 651 EIVGQQQAVVKSMEDNYTFIDGIAGATIMGDGRVAMILDVSTI 693 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D TF +EA ELL M LL L+ + D + +N IFR H++KG A G + + Sbjct: 5 DLLNTFIEEAKELLDKMVVDLLELEAKPGDMDLINNIFRGMHTLKGSASLTGLNDIANFV 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQALRQ 125 H E+LLD+ RRG + +N +INL L D++ E ++A + + I +++ Sbjct: 65 HHSEDLLDQVRRGCITVNDKVINLLLTCTDLIGEMVEALGNDDVQVKNEKVESIIWEIKK 124 Query: 126 LALEAKGETPS 136 L + TPS Sbjct: 125 LLKDQTEHTPS 135 >UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4560 Length = 818 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/391 (47%), Positives = 282/391 (72%), Gaps = 6/391 (1%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG--QLQRNA 314 R E ++RV +++D+LIN +GELVI QSM Q E D +++G + S+ +L + + Sbjct: 415 RIPEKETVRVDKDRLDKLINTIGELVIAQSMAQQ---EFDEMSNGSGVGSLALPELAKIS 471 Query: 315 RDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL 374 RDLQE +S+RM+P++ F + RLVRDL+ K+ K VEL L G TELDK++++++ DPL Sbjct: 472 RDLQELSLSLRMVPLQGTFQKMARLVRDLSRKMNKPVELELHGEETELDKTVVDQLGDPL 531 Query: 375 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 H+VRN++DHG+E P++R GK G++ L A HQGG++ IE+TDDG GL+RERIL KA Sbjct: 532 MHMVRNAVDHGLEDPDERTTVGKTREGHVELRAYHQGGSVFIELTDDGKGLDRERILKKA 591 Query: 435 ASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 + + + ++D E+ LIF PGFSTA+ VTDVSGRGVGMDVV+RN++ + G++ I++ Sbjct: 592 VEKAIIAEGQRLTDPEIYALIFEPGFSTAKAVTDVSGRGVGMDVVRRNVEALQGNILIRT 651 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 + G GTT I LPLTLAI+DG+ V + D+V++LPL +V+ES +P ADL +AG + Sbjct: 652 QAGKGTTFTIRLPLTLAIMDGLMVALGDDVYVLPLLSVVESFRPHPADLRRVAGHGEAVT 711 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 VRGE +P++ L ++F + + +G+VV+++ G+++A+LVD+L+GQ Q VVK+L++N Sbjct: 712 VRGEVVPLLRLHQLFGRSARVEDPGRGLVVLVEDQGKKHAILVDELLGQMQAVVKSLDAN 771 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAIN 644 YR+V G++ ATILGDG VA+I+D+ L ++ Sbjct: 772 YRRVEGLAGATILGDGRVAMILDIHGLAQLH 802 Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 4/98 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 I DF Q EA E L +++LLV+ + +A LNA++R H+IKG + G + +Q Sbjct: 223 IGDFCQ----EASEHLETADRNLLVIDGDPTNANALNAVYRGFHTIKGVSSMLGLAAVQM 278 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 H ENLL+ AR G+++L ++L + D ++ Q+ Sbjct: 279 VAHEAENLLNLARDGKVRLQGKPMDLVFASTDALKRQV 316 >UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae RepID=CHEA_RHOSH Length = 686 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 239/671 (35%), Positives = 367/671 (54%), Gaps = 42/671 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQP---EAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MD SD FF E ++L+ + + L ++ + D E +NA+FRA HSIKGGAG F Sbjct: 1 MDQSDIRSAFFVECEDLMEALNEGLDRIEDTLDDGHDDETVNAVFRAVHSIKGGAGAFKL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E LD R G + + ++ L + D + + L A + E D + Sbjct: 61 DALVRFAHQFETTLDALRAGRVSADPPLLALLHKAADRLSDLLQAARTGSETATIDPDDL 120 Query: 120 CQALRQLALEAK---------GETPSAVTRLSV-VAKSEPQDEQSRSQS----PRRI--- 162 L Q A E + G P RL + + + P + QS S P R Sbjct: 121 VAQLAQAAGEEEAGEADAEDLGFVP---MRLDLDLPAAAPDEGQSGCYSIDFSPTRALYA 177 Query: 163 ----------ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL 212 +LS L EV L L L D + L D E I V Sbjct: 178 CGNDTSILFRVLSDLGRMEVRLDRSRLPDFDAL-DWQESWLDWHLTLETDEPEHQIDEVF 236 Query: 213 CFVIEADQITFETVEV-SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS-----IRV 266 FV + ++ + + +P+ P + +G +K+ + TS +RV Sbjct: 237 EFVEDLCRLEIRPMAMEAPRTDPDPEPDPEPDPPASGPAAAKKSPAEDHRTSSPRATVRV 296 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 +++VD+LIN+VGELVI Q+ML+Q + + + + AR++QESVM+IR Sbjct: 297 ELDRVDRLINIVGELVINQAMLSQCVQDEGVPPRSPVRNRLDDFRNLAREIQESVMAIRA 356 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 ++ +F R R+ R+ + KQ+ L G STE+DK++IER+ DPLTH++RN++DHGI Sbjct: 357 QAIKPLFQRMSRIAREASEISQKQIRLVTEGESTEVDKTVIERLADPLTHMIRNAVDHGI 416 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NM 445 E ++RL GK VG + L+A H+ G + IE+ DDGAG+NR R+L A +GL + + Sbjct: 417 EPADRRLHLGKPPVGLITLTAAHRSGRVLIEIKDDGAGINRPRVLEIAQGKGLVAQDAQL 476 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 +++E+ L+F PGFSTA V+D+SGRGVGMDVVK I+ +GG + I S G GTT I L Sbjct: 477 TEEEIDGLLFMPGFSTASVVSDLSGRGVGMDVVKSAIESLGGRITIASDPGVGTTFTISL 536 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLA+LDGM V V + ++P++A++E+L+PR AD+H L G++V+ +RG +PIV+ Sbjct: 537 PLTLAVLDGMVVDVGGQTMVVPVSAIVETLRPRPADIHVLGSGDQVVAIRGSLVPIVDCG 596 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRR-YALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 +F + +++++++ ++ AL+VD + Q QVV+K LE+ Y ++PG++AAT Sbjct: 597 SIFGFRAPVRSYEESVLLLVETARQKLCALVVDTIHDQRQVVIKGLENGYGRIPGVAAAT 656 Query: 625 ILGDGSVALIV 635 ILGDG +ALI+ Sbjct: 657 ILGDGRIALII 667 >UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P4M6_VIBME Length = 712 Score = 367 bits (943), Expect = e-100, Method: Compositional matrix adjust. Identities = 244/700 (34%), Positives = 381/700 (54%), Gaps = 81/700 (11%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPD--AEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 +T++ E+ ELL ME LL L+ E+LNAIFRAAH++KG AG F + TH Sbjct: 10 ETYYTESRELLEGMELDLLELEAGNHQDLNERLNAIFRAAHTVKGSAGIFNLDAIVHFTH 69 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +ENLLD+ R ++ L ++I+L +D M LD + Q+ A + I + L + Sbjct: 70 KVENLLDQLRSEQLVLTGEVISLLFRCRDHMLTLLDEAQFEQQHHADN-QQISETLIEQL 128 Query: 128 LEAKGETPSAVTRLSVVAKSE--------------PQDEQSRSQSPRRIILSRLKAGEVD 173 GE P T + + S PQ P K G+++ Sbjct: 129 NAFLGEQPDVKTSEAPIKDSAPLTVEAQRFLWVKFPQSALQDGMDPLSFFAYLAKLGQIE 188 Query: 174 LL---EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFV--------IEADQIT 222 + + L T D S L D +++I AV F+ A+Q T Sbjct: 189 QIIFDDSSLPQEWTDFDSENCYLSWQIALNSDAQDEEILAVFEFIRDEGEVYLFSANQCT 248 Query: 223 -----------------FETVEVSPKISTPPVLK----LAAEQAPTGRVEREKTTRSN-- 259 F+ + + + P++ + ++ + + K +S+ Sbjct: 249 PALLDELQQKGMHNLEHFQACGLQLDLMSEPLIDAESPIEVQEDSDQSITQAKPVKSDAA 308 Query: 260 ------------ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD--LIT 305 E S+RV EK+D LINL+GELV + A ++S +H D + Sbjct: 309 VAKSAANETVNREQKSLRVDAEKLDTLINLIGELVTAGAGCALQAS-----SHADSAMQE 363 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 S+ +L +++++ + +RM+P+ F R+ R+VRD+A +LGK+++L + G TELDKS Sbjct: 364 SVSRLNGLLEEVRDAALKLRMVPIGNTFIRFQRVVRDVAKELGKEIQLDIHGGDTELDKS 423 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E+I DPL HL+RN++DHGIE+PEKR GKN G + L+A H GNI +E+ DDG GL Sbjct: 424 VVEKIGDPLMHLIRNAMDHGIEMPEKRREQGKNHSGQITLNAYHDSGNIVLEIIDDGKGL 483 Query: 426 NRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 + E++ KA +GL + ++ DE+ LIF PGFS A++V+++SGRGVGMDVV+RNI + Sbjct: 484 DAEKLRLKAIEKGLIDEHSVLTRDEMYQLIFEPGFSMAQEVSNLSGRGVGMDVVRRNINE 543 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G VEI+S+ GTT+R++LPLTLAI+DG + V DE F++PL+AV E ++ HP Sbjct: 544 LRGRVEIESELSIGTTVRLILPLTLAIIDGFLIEVGDEEFVVPLDAVKECVELH----HP 599 Query: 545 LAG-GERV---LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + G +V L +RG LP+++L K FN+ K + VV++Q+GG+ L+VD+L+ Sbjct: 600 VTKQGVKVSSHLNLRGSVLPLIDLRKQFNL--NKQAPRRQNVVVVQTGGQMAGLVVDRLL 657 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 G+ Q V+K L + + GIS +TILG+G +ALI+D+ L Sbjct: 658 GELQTVIKPLGPIFENIQGISGSTILGNGDIALILDIPGL 697 >UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Tax=Exiguobacterium RepID=B1YI82_EXIS2 Length = 663 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 236/670 (35%), Positives = 379/670 (56%), Gaps = 42/670 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++++ F DE+ E L + LL+ + D ++ IFR+AH++KG +GT G+ + Sbjct: 1 MDLNEYLGLFLDESIEHLQAINSSLLIFEQRLDDEAVIDQIFRSAHTLKGMSGTMGYDAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLF------LET--KDIMQE---QLDA------Y 105 + TH ME+ LD R ++I++ LET +DI Q +LD Sbjct: 61 ADLTHEMESALDLVRSKTQPATPELIDVLFVAAEQLETMVEDISQGGTGKLDVTTTVIRL 120 Query: 106 KQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILS 165 KQ +PD S +A + + + + S SVV +S Q+ + Sbjct: 121 KQFIDPDTESGKDTVKAAGTVMMNFECDVYSE----SVVRQSMASGYQAYVITVELSADV 176 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSL---------SAILPGDIAEDDITAVLCFVI 216 LKA V ++ + L +L + +D L + +DI + V Sbjct: 177 ILKAARVYMVFDRLQNLGDVILSNPTSDELEQEQFETRFDVLFVTMKTAEDIQQEIKAVS 236 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE---STSIRVAVEKVDQ 273 E Q+ + EVS + + L E+ P E +T + + +IRV +E++D+ Sbjct: 237 EVAQVLIQPFEVSVEPAAAATLLEPVEETPAVNTSIETSTETQTPIAAKTIRVNLERIDR 296 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L+NL E +I + L + ++E V DL ++ +++R +LQ V+++RMMP+E VF Sbjct: 297 LMNLFEEFIIDRGRLERIAAE---VGSSDLTETVERIKRGTNELQSLVLTLRMMPIEQVF 353 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 +R+PR+VR ++ +GK ++L + G+ TELD+++I+ I DPL HL+RN++DHGIE R+ Sbjct: 354 NRFPRMVRSVSKDVGKNIKLHITGAETELDRTVIDEIGDPLVHLIRNAVDHGIESKADRI 413 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEV 450 +AGK GNL L A H G + IE+ DDGAG+N+ER+ A +GL E ++ +E Sbjct: 414 SAGKPVEGNLSLRAYHSGNRVFIEIEDDGAGINQERVTKIALEKGLLTEEEATLLTPEEA 473 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 AML+FAPGFSTAE VTD+SGRGVG+DVVK I+ +GG V +++K+G GT RI LPLTL+ Sbjct: 474 AMLLFAPGFSTAETVTDLSGRGVGLDVVKSKIESLGGEVFVETKRGEGTIFRISLPLTLS 533 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 I+ M V++ E + +PL A++E+ ++ D+ A E+V + RG+ +P++ L +V+ + Sbjct: 534 IISAMLVKLDQETYAIPLTAIIETTSLKQ-DVILQAHREKVFDFRGQLVPLISLNQVYGL 592 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + +A VV+++SG + L+V +LIGQ ++V+K L S + IS ATILGDG Sbjct: 593 PHVEADAYS--VVVVRSGEKLAGLMVSELIGQQEIVMKPLGSYLEGIRAISGATILGDGQ 650 Query: 631 VALIVDVSAL 640 VALI+D +AL Sbjct: 651 VALIIDSNAL 660 >UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=Bacteria RepID=A6Q2K9_NITSB Length = 673 Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 229/670 (34%), Positives = 376/670 (56%), Gaps = 43/670 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D+ + F EA+E++ +++Q L+ L+ + + + LN IFR H++KGGAG G Sbjct: 5 VSEDMQEILDEFVQEAEEIIENLDQELIELESDPTNRDLLNEIFRGMHTLKGGAGFLGLE 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE-PDAASFDYI 119 + E H++E++ D+ R EM L +D++++ LE D+++ ++ K E PD + Sbjct: 65 SIIELAHVIESIFDKLRNNEMTLTSDMMDVILEGIDVLKSAIETLKSENEIPDVDEIKPL 124 Query: 120 CQALRQLALEA----KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD-- 173 L + LE + + + ++S V + EP + + S + I + +VD Sbjct: 125 LDKLNHI-LENPESFQADKSARSEQISEVTEQEPSEAEQESSNNNSIKEEIIFHDDVDEK 183 Query: 174 ---LLEEELGH--LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI----EADQITFE 224 L+ E G L D++ +LP + + D+ L +I + + + E Sbjct: 184 IQQLIREHPGKNFKEILDDLI--------LLPPEERDMDLIMKLDELINEGKDVEDLIKE 235 Query: 225 TVEVSPKIST-PPVLKLAAEQAPTGRVEREKTT-----RSNESTSIRVAVEKVDQLINLV 278 + P++ V E+AP E+ KT + E+ +IR+ +E+V L+NLV Sbjct: 236 RRIIEPEVKEESSVSSKQEEKAPVTVPEKSKTVPKPKQKKEETETIRIDIERVSTLMNLV 295 Query: 279 GELVITQSMLAQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 GELV+ ++ + + +S L D +L ++ + R+ DLQE VM +RM P++ +F Sbjct: 296 GELVLDRNRIVKLTSRLRSNCEDSEAIEELNEAIAGMSRSVSDLQEVVMKLRMQPVKRIF 355 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 S++PR+VRDLA K+GK++EL L G TE+D+S++ ++ DPL HLVRNS+DHGIE PE+RL Sbjct: 356 SKFPRIVRDLAKKMGKKIELILEGEDTEIDRSILNQLEDPLIHLVRNSIDHGIETPEERL 415 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEV 450 A GK G++ILSA +G I + + DDG G+N E++ KA +GL E MSD E Sbjct: 416 AKGKPETGHIILSALQEGDRIIVSIEDDGRGINAEKVKQKAIEKGLITPEQAAQMSDKEA 475 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 LIF PGFST ++V+++SGRGVGMDVV I + G +EI+S+ GT I + LPLT+A Sbjct: 476 YELIFMPGFSTVDEVSEISGRGVGMDVVSNVIHSLRGAIEIESEPDKGTKITMKLPLTVA 535 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 I+ + V + +F +PL +V+E ++ D+ + G + L +R E L ++F++ Sbjct: 536 IIRTLMVGTNNRIFAIPLFSVVEIIKYNPEDIKDV-GTYKSLVLRDEVYLFFHLNELFDL 594 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 E ++IL G + A+ VD L G+ ++V+K L + V GI+ ATI GDG Sbjct: 595 ESNHKEK---FIIILNIGEKNIAIAVDDLFGEEEIVIKPLGEMLKDVQGIAGATITGDGK 651 Query: 631 VALIVDVSAL 640 V LI+D+ +L Sbjct: 652 VVLILDIKSL 661 >UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax=Campylobacterales RepID=D1B4I4_SULD5 Length = 678 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 230/673 (34%), Positives = 377/673 (56%), Gaps = 45/673 (6%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 Q F +EA+E++ M+ ++ + A D LN IFR H++KG A F FS L E H Sbjct: 8 QIFIEEANEIIEKMDIDIVNYESAASDKALLNEIFRGVHTLKGSANAFNFSRLGEFVHHF 67 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQL--DAYKQSQEPDAASFDYICQALRQLA 127 E++LD R E N+ ++LFLE+ +++E L D +Q P+A + + ++ L Sbjct: 68 EDILDFFRNSEDIPNSSHVDLFLESVSVIKETLVCDVEGSAQLPEA--YGLCLEKIQMLL 125 Query: 128 LEAK-GETPSAVTRLSVVAKSEPQDEQSRSQSPR-RIILSRLKAGE----------VDLL 175 L + E PS+ + + + + + S P + L++ ++ E D+ Sbjct: 126 LTLREPEMPSSSSSTDLTLEFDNEHFFPSSALPDVKTFLAQCQSNEKLYRITLTLESDIY 185 Query: 176 EEELGHL---TTLTDVVKGADSLSAILPG------DIAEDDITAV-LCFVIEADQITFET 225 H L V K S +I G D+ + ++ V LC + + + E Sbjct: 186 LRGFDHFLFFKNLLHVGKIVASFWSIPKGLEDEAFDVERNILSKVTLCLITQESREAIED 245 Query: 226 V------------EVSPKISTP--PVLKLAAEQAPTGRVEREKTTRSNESTS--IRVAVE 269 V EV P ++ P P+ E+A E K +S T +++ + Sbjct: 246 VFAFLEPEEFHIEEVVPSLNEPSTPLASQVREEAVVVDKEEAKPLKSALVTKNFLKIDAQ 305 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 K+D+L + +GELVI Q+ L + +S++ + ++ ++ L + R +Q VM +RM+P+ Sbjct: 306 KLDELFDSIGELVIAQNCLGE-NSKIKAIQDTEVTKTIENLSKITRLIQNRVMGLRMIPI 364 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-L 388 F + R+VRD + K+ K + LTL G TE+DK+++E + DPL H++RN++DHGIE Sbjct: 365 RDTFEKMKRVVRDSSKKVNKPIHLTLEGEETEIDKTMVEALSDPLVHIIRNAIDHGIEGT 424 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSD 447 E+RL AGK+ GN+ L A H+GGNI IEV DDG G+N+ ++ KA +GL E +S+ Sbjct: 425 QEERLQAGKSEEGNVRLRAYHRGGNIIIEVRDDGRGINKSKVYQKALERGLIEQDEVLSE 484 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 +++ LI PGFSTA+ ++D+SGRGVG+DVV+ I+ + G V+I S++G GTT I+LPL Sbjct: 485 NQIYGLIMQPGFSTADTISDISGRGVGLDVVRTAIEAVRGKVDISSQEGVGTTFSIVLPL 544 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAI+DGM VR +++FI+P ++ ES +P E ++H G E +++R E LPIV L V Sbjct: 545 TLAIIDGMLVRSNEKIFIIPTLSITESFRPLEQNVHSARGKEEFVQLRSELLPIVRLNHV 604 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 ++ + +V +++ ++ALLVD+L+G+ QVV+K L + K GIS ++G Sbjct: 605 LDIDENAPPPWECTLVCVENSRGKFALLVDELVGRQQVVIKTLGAFLVKTEGISGGAVMG 664 Query: 628 DGSVALIVDVSAL 640 +G +ALI++V L Sbjct: 665 NGEIALILNVEEL 677 >UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYP7_BRAHW Length = 720 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 175/398 (43%), Positives = 278/398 (69%), Gaps = 4/398 (1%) Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 T+ +++RV K+D L+NL+GELVI QS + Q + LD +++G L ++ + R +R Sbjct: 322 TKVQAPSTVRVDTRKLDSLMNLIGELVIAQSRIMQLTQSLD-IDNG-LKEAVSSMDRTSR 379 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +QE VM+IRMMP+ +F+++ R VRDL +L K+V+L L G +TE+DK+++E++ DPL Sbjct: 380 QIQEEVMNIRMMPIGPIFTQFHRYVRDLNLELNKEVKLVLKGETTEIDKNMLEQLSDPLK 439 Query: 376 HLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 H++RNS+DHGIE E+R+A GK G + +SA HQ G++ IEV+DDG GLN+E+I KA Sbjct: 440 HIIRNSMDHGIEKTKEERIARGKPEYGTITMSAAHQEGHVVIEVSDDGNGLNKEKIFNKA 499 Query: 435 ASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +GL + SD E+ IF+PG STAE++TD+SGRGVGMDVV+ N++KM G +EI+S Sbjct: 500 VEKGLLSRDGKYSDIEIYRTIFSPGLSTAEKITDISGRGVGMDVVRANVEKMKGKIEIKS 559 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 +G G+T I LPLTLAI++G++ + +++I+PL +++E ++ + + P G +++ Sbjct: 560 TEGQGSTFIIKLPLTLAIIEGITFALGKQIYIMPLISIIEQIKVKNEQVKPFEGKGEMIK 619 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 +R EYLP++ L KVF + GIVV++++G R+ A+ VD+L+ Q QVV+K+L+S Sbjct: 620 IRDEYLPLIRLHKVFEIDTQVDNIDDGIVVVVEAGYRKCAIFVDELLDQQQVVIKSLDSA 679 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 + K GI+ TILGDG +ALI+D+ L ++ + ++ N Sbjct: 680 FSKHAGIAGGTILGDGRIALIIDIQGLVNMSLQGKINN 717 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 10/155 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D +F F EA+E++ +E L++L+ D + LN IFR+AH++K AGT GF+++ Sbjct: 2 FDSDEFISIFLSEANEIVEGLENDLVLLEDNKSDEDLLNKIFRSAHTLKSSAGTVGFTIM 61 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKD----IMQEQLDAYKQSQEPDAASFDY 118 E H+ ENLL++ R G++ + +I + LE D ++Q +D +S+ + D Sbjct: 62 SELNHVAENLLEKVRSGKLDVTPQMITVLLEFLDTVKLMLQNIVDG--KSETEGVTNIDS 119 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ 153 + ++ +A T +A + A EP+ E+ Sbjct: 120 LKAKIKAIADGNDVSTAAATPK----ASPEPKKEE 150 >UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0K1_DESRD Length = 871 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 183/380 (48%), Positives = 267/380 (70%), Gaps = 3/380 (0%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++++ +++D L++ +GELVI +S++ Q +L + L ++ QL + R LQ+ M Sbjct: 480 TMKIDADRIDLLLDTIGELVIIESIVTQ-DEKLSDLASPQLERNLAQLTKITRSLQDMGM 538 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 S+RM+P+E F R RLVRDL K GK+VEL +VG TELDK+++E++ DPL H++RN++ Sbjct: 539 SMRMVPIETTFRRMARLVRDLGKKSGKKVELEMVGKETELDKAMVEKLGDPLVHMIRNAV 598 Query: 383 DHGIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 DHGIE PE R+AAGK++ G + L A H+GG+I I + DDG GLNRE I AKA +G+ Sbjct: 599 DHGIEPTPEDRVAAGKSAEGRIWLKAFHEGGSIHIVIEDDGRGLNREAIAAKAVERGIIE 658 Query: 442 SEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 S N MSD+E+ LIFAPGFSTA QVTDVSGRGVGMDVVK NI+ + G++ I+S G GTT Sbjct: 659 SANGMSDEEIYGLIFAPGFSTAAQVTDVSGRGVGMDVVKSNIENLRGNIRIRSTPGEGTT 718 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 ++LPLT+AI+DGM ++V E +ILPL ++++S QP + + + G L RG LP Sbjct: 719 FTLVLPLTMAIIDGMQIKVGSERYILPLLSIIQSFQPTKEMVATVVGKGETLPFRGRLLP 778 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 + L ++F V A+T+ TQ I V+++ GGR+ ALLVD+L+GQ+Q V+K+L + G+ Sbjct: 779 LFRLSELFGVDDAETDPTQAIAVVVEDGGRQVALLVDELLGQNQTVIKSLGEAMGSIRGV 838 Query: 621 SAATILGDGSVALIVDVSAL 640 S A+IL DG+ LI+DV+ + Sbjct: 839 SGASILSDGTPGLIIDVNGV 858 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 10/134 (7%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F EA E +++LL L+ + + + + A+FRA H+IKG G + + E H EN Sbjct: 280 FISEAQEHFEIADENLLTLESDPDNLDAVAAVFRAFHTIKGTCGFLDLTPIAELAHKAEN 339 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS------QEPDAA---SFDYICQA 122 LLDE R+ + ++++ D++++ + +++ PD + +FD++ + Sbjct: 340 LLDEVRKENLTFRGEVVDATFSALDMLKKMVGQLEEALGAGAEYVPDPSLRQTFDFVNR- 398 Query: 123 LRQLALEAKGETPS 136 +RQ A PS Sbjct: 399 IRQQPQAAAPSAPS 412 >UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCW7_GLUDA Length = 751 Score = 357 bits (916), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 181/390 (46%), Positives = 271/390 (69%), Gaps = 4/390 (1%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 R E SIRV + ++D L++LVGELVI Q+ + S D +L+ S+ +Q RD Sbjct: 343 RRPEQASIRVDLHRIDDLMDLVGELVIAQAAIESLSRRDDSSAMRELVESVTSMQSLTRD 402 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 +Q++VM++R P+ VF R R+VR+ K V LTL G TE+D++L+E++ DPLTH Sbjct: 403 IQDAVMAVRAQPVRSVFQRMQRVVREACSMTDKDVVLTLEGEDTEVDRTLVEKLTDPLTH 462 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 ++RN++DHGIE E RLAAGK++ G+++LSA H+ G I I + DDG G+NRER+LA A S Sbjct: 463 MLRNAVDHGIEKTEDRLAAGKSATGHVLLSAAHRSGRILITIRDDGGGINRERVLATAIS 522 Query: 437 QGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 +G+ + ++DDE+ L+FAPGFSTA +V+D+SGRGVGMDVVK+ I +GG + I S + Sbjct: 523 RGIVAPDAVLTDDEINNLLFAPGFSTAAKVSDLSGRGVGMDVVKQAILSLGGRITISSVR 582 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G GTT + LPLTLA+LDGM V D ++P+++V+E++ D++ L GG V+ +R Sbjct: 583 GEGTTFCLSLPLTLAVLDGMLVSAGDSTMVIPVSSVVETMMIDHQDVYTLPGGGNVISIR 642 Query: 556 GEYLPIVELWKVFNV--AGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLES 612 G +P+V L K + AG+ + + +++++++ G R AL+VD++ Q QVV+K++E Sbjct: 643 GSCMPLVPLGKELGLSSAGSDERSDEAVILVVENESGARAALIVDKIHDQTQVVIKSMEK 702 Query: 613 NYRKVPGISAATILGDGSVALIVDVSALQA 642 NYR++PG+SAATILGDGSV+LI+DV L A Sbjct: 703 NYRQIPGVSAATILGDGSVSLILDVPGLIA 732 Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 5/129 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+ D Q FF E DE L ++E+ L L E +NA+FRA HSIKGGA +FG Sbjct: 7 MNGDMDDILQIFFQECDEQLQELERGLSALSDGESGHETINAVFRAVHSIKGGAASFGLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L H+ E+ LD R + +II FL+ D++ + + ++ D AS D+ Sbjct: 67 NLVRFAHVFESSLDGLRSDRISPTPEIIKTFLKAMDVLSDLV-----AEARDGASVDHGR 121 Query: 121 QALRQLALE 129 A Q LE Sbjct: 122 VAESQAELE 130 >UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=8 Tax=Pseudomonas RepID=Q4ZYC8_PSEU2 Length = 705 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 263/704 (37%), Positives = 389/704 (55%), Gaps = 68/704 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++ QTF EA ELL ME+ LL L+ E D + + A+FRAAH+IKG AG FG + Sbjct: 1 MSINLDQAQQTFIVEARELLQAMEESLLQLESEPGDLDAIGAVFRAAHTIKGSAGLFGLT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY----KQSQEPDAASF 116 + TH++E++LD R G + +N ++I + L++ D M E +D +Q Q+P Sbjct: 61 PIVSFTHIVEDVLDRLREGSVSVNAELIAVLLKSGDHMLELIDVVASRGEQLQQPALERE 120 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + QAL+ +A +A + V + Q R + + G +D L Sbjct: 121 AALRQALQ--VFQAPASASAADIASAQVVSDDEQSADVLWHISLRFGVDVFRNG-MDPLS 177 Query: 177 -----EELGHL---TTLTD---VVKGADSLSAILPGDI------AEDDITAVLCFVIEAD 219 LG + TTLTD V+ D S L +I I V FV E Sbjct: 178 FLRYLNTLGQMVQVTTLTDSIPTVEAWDPESCHLGFEIDFRSAAGHAAINEVFDFVREDC 237 Query: 220 QITFETVEVSPK---------ISTP---PVL---KLAAEQAPTGR-----------VERE 253 + ++ +P +S P PV+ +L +Q R VER Sbjct: 238 AVEITPLDETPDHVEPTGTELVSQPEHSPVVASGELLGDQRAVPRTPATATATATAVERP 297 Query: 254 KTTRSNESTSIRVAVEKVDQ---LINLVGELVITQ---SMLAQRSSELDPVNHGDLITSM 307 + ++ R D+ LINLVGELVI S+LA +S + DP+ S Sbjct: 298 SSGSEQKNKDGRYVRVNADKLDELINLVGELVIASAGASLLA-KSCDNDPLQEASSTVS- 355 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 G +++ + + + +RM+P+ F+R+ R+VRD++ +LGK ++L + G+ TELDK+++ Sbjct: 356 GLVEQ----ILDGALHLRMIPIGDTFNRFRRVVRDVSQELGKDIDLIINGAETELDKTVV 411 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 E+I DPL HL+RNS+DHGIE E R AAGK + G+L L+A H G+I IE+ DDGAGLNR Sbjct: 412 EKIGDPLMHLLRNSMDHGIESAEARRAAGKPAKGHLSLNAYHDSGSIVIEIADDGAGLNR 471 Query: 428 ERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 ERIL KA +GL + +++D E+ LIF PGFSTAE VT++SGRGVGMDVVKRNI + Sbjct: 472 ERILDKAQQRGLVAAGASLTDQEIYNLIFEPGFSTAEAVTNLSGRGVGMDVVKRNITLLR 531 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G V++ S+ G GT +RI LPLTLAI++G V + +++PL+ V E ++ E + L Sbjct: 532 GTVDLDSQPGQGTIVRIRLPLTLAIINGFLVGIDQSTYVIPLDMVQECIELDEHN-RQLT 590 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 L++RGE LP+V L FN G A + VV+++ + L+VD L+G+ Q V Sbjct: 591 RDSGYLDLRGEVLPLVYLRDHFNHEGPA--ARRQNVVVVRYAEHKAGLVVDDLLGEFQTV 648 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL--QAINREQR 648 +K L + + GIS +TILG G+VALI+D+ AL Q ++ E R Sbjct: 649 IKPLGKLFGALRGISGSTILGSGAVALILDIPALLNQIVHMEAR 692 >UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GTW3_9BURK Length = 722 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 250/700 (35%), Positives = 365/700 (52%), Gaps = 76/700 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +D+ FF EA +LLA++E ++L L+ D E LNA FRAAH+IKG AG FG Sbjct: 3 FELDLDASRGIFFTEARQLLAEVESYVLQLEQNPNDTEVLNAAFRAAHTIKGSAGVFGLL 62 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY-I 119 V+ H +E +LD R E+ + ++ L LE +D + E +D + + + S D + Sbjct: 63 VITHFVHDLETVLDRVRNSEIGFDANMSTLVLECRDHISELVDCIEAGGDAEHVSPDMAV 122 Query: 120 CQALRQLALEA---KGETPSAV--TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 QA L+A + + P A+ +R V +E Q + R + + Sbjct: 123 AQAGLTARLKAYLLQEDQPDAIQPSRPLEVNNTE-QTWHVSVRLGRSTLCDGFDPAPIFS 181 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA------DQITFETVEV 228 E G L + V+ D+L + D + L FV + D F T E Sbjct: 182 YMETYGELQAVIPVL---DALPSFADLDAESCYLGFELRFVTDKGQAGIEDAFEFLTEES 238 Query: 229 SPKI----STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 +I TP P G + + E+ R E + +++ + G V T Sbjct: 239 RVRILSHSCTPEQWDALVSALPEGAARAAELLQ--EAGFPRPQEEALPEVMEVTGNAVTT 296 Query: 285 QSMLAQRSSELDPVNH----------------GDLITSMGQLQRNARDLQESVM------ 322 S ++ + + PV+ G+L+ + A+ L + M Sbjct: 297 ASGKSKATGKATPVSSFIRVPSDKLDALINLVGELVIANAGTVEQAKHLNHTAMLESTSA 356 Query: 323 -------------SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 +RM+ + F R+ R+VRD A LGKQ++L + G TELDKS++E+ Sbjct: 357 VAGLIEEIRDGALGLRMVQIGETFQRFQRVVRDTAMGLGKQIQLEISGEDTELDKSVVEK 416 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 I DPL HLVRN+LDHG+E PE+R+AAGK + G L L+A H G+I IEV DDG GL RE+ Sbjct: 417 IGDPLMHLVRNALDHGLETPEERVAAGKPATGRLQLNAYHDSGHIVIEVNDDGRGLAREK 476 Query: 430 ILAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 IL KA +G+ T + +SD EV MLIFAPGFSTA++VTD+SGRGVGMDVVKRNI+ + G Sbjct: 477 ILKKAIEKGIVTPDQTLSDTEVNMLIFAPGFSTADKVTDISGRGVGMDVVKRNIEALRGS 536 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PREA------- 540 V+++S+ G G T I LPLTLAI+DG + V V+++PL+ V E L+ P +A Sbjct: 537 VQVRSRPGNGCTFEIRLPLTLAIIDGFMIGVGGSVYVIPLSYVRECLELPVDALGTEDRM 596 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 D+H ++RGE+LP V L KVF+ AK + I+V+ GG R ++ D L Sbjct: 597 DIH--------YDLRGEFLPCVRLRKVFH-PNAKRPKRENIIVV-SFGGVRAGIVADYLH 646 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 G+ Q V+K L + + + IS ATI+G+G VALI+DV L Sbjct: 647 GESQTVIKPLGNLFEQNRAISGATIMGNGDVALIIDVPKL 686 >UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=2 Tax=Verrucomicrobia RepID=B5JQF9_9BACT Length = 921 Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 179/388 (46%), Positives = 271/388 (69%), Gaps = 8/388 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSML--AQRSSELDPVNHGD--LITSMGQLQRNARDLQ 318 +IRV K+D L+++VGELVI QS L + R +E + GD L +M QL R ++LQ Sbjct: 534 TIRVNTIKLDNLMDMVGELVIVQSQLLESSRQTEGNGTAGGDSVLQRNMSQLTRITKELQ 593 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 + M++RM+P++ F + R++RD+ K GK+V G TELD++++E I DPL H+V Sbjct: 594 HTSMALRMIPVKPTFQKMGRIIRDIGAKCGKKVRFETFGEDTELDRNVVEEIGDPLVHMV 653 Query: 379 RNSLDHGIEL-PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 RN+LDHG+E +R AAGK+ G + L A HQG NI IE++DDG G++ +R+L KA S Sbjct: 654 RNALDHGLEADAAERQAAGKDETGYIALKAYHQGSNIVIELSDDGRGIDPDRVLKKAISN 713 Query: 438 GLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 G+ VSEN +S++E+ LIFAPGFSTAEQ+TD+SGRGVGMDVV++NI+K+ G +EI+S+ Sbjct: 714 GI-VSENDQLSNEEIYKLIFAPGFSTAEQITDISGRGVGMDVVRKNIEKLRGKIEIESEL 772 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G G+T RILLPLT+AI+DG+ VRV ++ FILP +V +L+P E L + G + +L +R Sbjct: 773 GKGSTFRILLPLTMAIVDGLVVRVGEDRFILPTTSVKVALRPDENVLAKVQGNQEILNIR 832 Query: 556 GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 G+ +P+ L + F + GA +E VV++++ G+ LLVD ++ + +VV+K+L + Sbjct: 833 GQVIPLFRLHQHFAIPGAISEPKDATVVVVETAGKPCGLLVDDMVSKQEVVIKSLGGMMQ 892 Query: 616 KVPGISAATILGDGSVALIVDVSALQAI 643 +PG+S ILGDG++ALI+D ++L ++ Sbjct: 893 GIPGVSGGAILGDGTIALILDPASLISV 920 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 20/136 (14%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q F EA++ L +E +L L+ + + +N++FR+ H+IKG AG + Sbjct: 340 ELLQEFHTEANDHLGQIETAVLDLEKDVTSRDAINSMFRSFHTIKGVAGFLNLVPVNRLA 399 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+L+D R ++ + T II+L L KD + +Q+ + I +AL Sbjct: 400 HEVESLMDLVRNDKLGVFTGIIDLVLAAKDTITKQI--------------EQITEAL--- 442 Query: 127 ALEAKGETPSAVTRLS 142 + G+TP+ V ++S Sbjct: 443 ---SNGKTPTEVIKVS 455 >UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 Tax=Campylobacterales RepID=Q30QC4_SULDN Length = 803 Score = 353 bits (905), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 228/659 (34%), Positives = 369/659 (55%), Gaps = 39/659 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + + Q F E+ EL+ ++Q L+ L+ D E LN IFR AH++KG + F VL Sbjct: 3 EFQEILQDFLVESFELIEQLDQDLVELETRPDDLELLNRIFRVAHTVKGASSFLNFDVLT 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH ME++L+ AR GE+ + I+++ LE+ D+M+ L + + A S + + Sbjct: 63 HLTHHMEDVLNRARHGELVILPAIMDVILESIDLMKALLHTIRDTS---ADSGIDVSGCV 119 Query: 124 RQLALEAKGET----PSAVTRLSVVAKSEPQDEQSR----SQSPRRIILSRLKAGEVDLL 175 +L AKGET P +SEP++ + +Q + + A E++ Sbjct: 120 SRLDKCAKGETNIEVPQTTISTPKATQSEPKEVKKEVVVETQESDELDYDNMDADELEAE 179 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS--PKIS 233 E L D +K + ED T+ E + E V V+ P + Sbjct: 180 IERLLKQRQEEDKIKREQKATN-------EDGATS------ETNGTEDEYVPVAKAPAVV 226 Query: 234 TP----PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 TP L ++ R +SN +IRV V+++D L+NL+GELV+ ++ L Sbjct: 227 TPARRPSSLGDDSDSNDDARAASPAKKQSNVEQTIRVDVKRLDHLMNLIGELVLAKNRLI 286 Query: 290 QRSSELDPVNHGD-LITSMGQLQR----NARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 + + +++ G+ + + Q+ DLQ +VM RM+P+ VF+++PR++RDL+ Sbjct: 287 KINDDVEERYEGESFLEELNQVVSIVSIVTTDLQIAVMKTRMLPIGKVFNKFPRMIRDLS 346 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 +L K++EL + G TELDKS++E I DPL H++RNS DHG+E+P+ RL GK+ G + Sbjct: 347 RELNKKIELEISGEDTELDKSIVEEIGDPLVHIIRNSCDHGVEMPKIRLEQGKSETGTIK 406 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFST 461 L A ++G I I++ DDG GL+ + + K+ +GL ++NMSD E LIF PGFST Sbjct: 407 LKAYNEGNQIVIQIDDDGKGLDVDMLKRKSLERGLITEKEADNMSDKEAFALIFKPGFST 466 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 A VT+VSGRGVGMDVVK NI+K+ G ++I S+ G GT++++ +PLTLAI+ + V V + Sbjct: 467 ATVVTNVSGRGVGMDVVKTNIEKVNGIIDIDSELGIGTSMKLKIPLTLAIIQALLVGVQE 526 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 E + +PL +V+E+++ + +++ + G V+ +R + L +V + +F V + Sbjct: 527 EHYAIPLASVLETVRISKDEVYTVE-GRSVMRLREDVLSLVHIGDIFEVERILDSSEYAY 585 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VV+L G + L+VD L+GQ ++V+K+L + + GI+ ATI GDG V LIVDV A+ Sbjct: 586 VVVLGLGASKLGLIVDTLVGQEEIVIKSLGEFLKGIEGIAGATIRGDGGVTLIVDVVAI 644 >UniRef50_Q6AJV5 Related to two-component system sensory/regulatory protein (Che family) n=2 Tax=Proteobacteria RepID=Q6AJV5_DESPS Length = 934 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 246/686 (35%), Positives = 369/686 (53%), Gaps = 75/686 (10%) Query: 3 MDISD--FYQTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFG 58 MD D Q F +E+ E L+ +E LL ++ A D E +N +FRAAHSIKGGAG G Sbjct: 2 MDFEDDEILQGFVEESLEHLSSIENDLLAIEEGGAAIDEELVNKVFRAAHSIKGGAGFMG 61 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + +QE +H EN+L R + +IIN+ L D +Q ++ S E D A+ Sbjct: 62 LTAIQELSHATENILGMVRNKSIIPTPEIINVLLIAADQLQTMIEDVANSNEADIAN--- 118 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 V+ L+ +A +D +++ SP+ + +A + ++ E+ Sbjct: 119 ------------------QVSALNAIA----EDSKNKQASPKPVPAVEPEAPKAEIAEDA 156 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET--VEVSPKISTPP 236 V I+P + + A VIE + ET VE + ++ + Sbjct: 157 FVLFAEAAPVKTPPIEQEEIVP-----EAVLAETPAVIETPAV-IETPVVETAIEVVSTV 210 Query: 237 VLKLAAEQAPTGRVERE-KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS-- 293 V +A + T + E K T + T++RV V +D L+ L GELV++++ L Q S Sbjct: 211 VQNIAPQVPATKESKAEGKKTTAQSDTTLRVHVSLLDSLMTLAGELVLSRNQLLQTISTP 270 Query: 294 ELDPVN----HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 EL V+ DLITS +LQE++M RM P+ VF ++PR+VRDL+ +LGK Sbjct: 271 ELHNVDTVGQRIDLITS---------ELQEAIMLTRMQPIGNVFGKFPRVVRDLSKQLGK 321 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 ++L +VG ELDK++IE I DPLTHLVRNS+DHGIELP +RL GK+ G +IL A H Sbjct: 322 TIDLNIVGKDVELDKTIIEAINDPLTHLVRNSVDHGIELPAERLKRGKSERGQIILKAFH 381 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVT 466 + G +CIE++DDG GL+ E + A A S+GL E MS E LIF PGFSTA +VT Sbjct: 382 EAGQVCIEISDDGKGLDEEVLTASAVSKGLISPEQAQLMSGKEKINLIFMPGFSTAAKVT 441 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 DVSGRGVGMDVVK N+ ++GG+VEI S+ G GTTI I LPLTLAI+ + +++E + + Sbjct: 442 DVSGRGVGMDVVKTNLDQLGGNVEILSELGHGTTISIKLPLTLAIIPCQIITLSNERYAI 501 Query: 527 PLNAVMESLQPREADLH---PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-- 581 P + E L+ + + G V+ +RG LP++ L V + + + Sbjct: 502 PQVNLEELLRISASQVKERIERVGDAEVVRLRGNLLPLIRLADVIGLGQQDKDQSSAALD 561 Query: 582 --------VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 +V++ +G +Y L+VD L ++V+K L + ++ + ATI+GDG +AL Sbjct: 562 TAGDSALNIVVVSTGSMKYGLIVDSLQDSEEIVIKPLGRHLQQCKAYAGATIMGDGRIAL 621 Query: 634 IVDV------SALQAINREQRMANTA 653 I+D+ + L ++ QR A A Sbjct: 622 ILDLGNIAKMATLNSLEGTQRAAELA 647 >UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A371_NATTJ Length = 713 Score = 351 bits (900), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 234/715 (32%), Positives = 382/715 (53%), Gaps = 90/715 (12%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DEA E L M Q+L+ L+ D L+++FR AH++KG A T G+ + TH Sbjct: 5 YLDVFIDEAREHLQTMNQNLIDLEQSPEDRSILDSLFRVAHTLKGMAATMGYQGVANYTH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +EN+LD R+GE ++ ++II+L LE D ++E ++ + ++ D F + L Q Sbjct: 65 KLENILDSFRQGEKKITSNIIDLLLEGADALEEFVNKLSEGEQVDL-DFSSMQSRLEQAF 123 Query: 128 LEAKG---ETPSAVTRLS------------VVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 +A ETPS S + A SE Q + S ++ + L E Sbjct: 124 AKADRDSFETPSQAQDTSSTNNEQSKGEAEMAATSEVQTDSSGEKAGSESDILDLNEYEG 183 Query: 173 DLLEEELG------HLTTLTD---VVKGADSLSAILP----GDIAEDD------------ 207 +LL+ L H+ + D ++KGA + G+I + D Sbjct: 184 NLLKSALNDDYSAYHIRVVFDENVLLKGARAFMVFQKVEARGEIIKSDPEVEEIEDENFD 243 Query: 208 -------------------------ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 I V V++ DQ+T +T K+ Sbjct: 244 QEIELIVVTKVDQQEIKSDIEQVSEINEVYLKVLQEDQLTDKT---DEGADEDDDEKVQT 300 Query: 243 EQAPTGRVEREKTTRSNESTS---------IRVAVEKVDQLINLVGELVITQSMLAQRSS 293 E+ + +++ + ++ S +RV +E++D+L+NLV ELVI ++ L Q ++ Sbjct: 301 EEQKVQQKDKQDEAKDSDGQSQQKIKTGKTVRVDIERLDKLMNLVSELVINKTRLEQVAN 360 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 + +L + Q R ++Q VM +RM+P++ VF+R+PR+VRDL+ L K+V L Sbjct: 361 NKES---SELGKTSEQFSRITSEIQNVVMKVRMVPLDQVFNRFPRMVRDLSRSLNKEVNL 417 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 + G TELD+SLI+ I D L HL+RN+LDHG+E E R +GK++ GN+ + A H N Sbjct: 418 VIEGRETELDRSLIDEIGDLLMHLIRNALDHGLEDSETRHKSGKSAKGNIHIKAYHNENN 477 Query: 414 ICIEVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 + IEV+DDG G++ E++ KA S+GL SE + D EV +F PGFST+++V++VSG Sbjct: 478 VVIEVSDDGKGIDPEKVRKKAISRGLLDSQQSEQVPDSEVINFLFTPGFSTSDEVSEVSG 537 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVG+DVVK ++ +GG VE+ S+ GT + LPLTLAI+ + V V +E + LPL++ Sbjct: 538 RGVGLDVVKSKLENLGGRVELDSEINQGTKFTMYLPLTLAIIQALMVNVGNEQYALPLSS 597 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA----GAKTEATQG-IVVIL 585 + E+ + D+ + E V+ +R + +P+++L + +V G + A Q +I+ Sbjct: 598 IEETTILTDQDIQKVQEQE-VIRLRDQLVPLIDLHDILDVERTENGEQEHAEQERFAIIV 656 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 + G ++ L+VD+L+GQ +VV+K+L + G + ATILGDG VALI+DV++L Sbjct: 657 RKGDKKAGLIVDELLGQQEVVIKSLGGFLADIKGFTGATILGDGKVALILDVNSL 711 >UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKH2_9BACT Length = 670 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 232/694 (33%), Positives = 371/694 (53%), Gaps = 80/694 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+S + + DEA + L + + +L ++ + + ++ IFR AH++KG + T GF Sbjct: 1 MSTDMSQYLGAYLDEATDNLQQLNELILAVEQDRRSRDTIDEIFRTAHTLKGMSATMGFK 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E+ + R G+ L D I+ ++ D+MQ +DA + + Sbjct: 61 HMAELTHALEDRFSKVRSGDEDLTDDDIDHLFQSLDLMQSMVDAIRDGGTDQDTDISSLV 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG------EVDL 174 LR+ +E PS+V + + +E S + ++ K G +V L Sbjct: 121 AQLREENVE-----PSSVEKGT--------EESELSDQEKEWLVDATKMGLAVYKVKVLL 167 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL---CFVI------EADQITFET 225 +E L VV + + I+ D + DD+ F++ EAD + Sbjct: 168 DQECLLKAARAYMVVSRLEEMGEIVKCDPSVDDLEKEQFDHSFIVYIGTKDEADVVKNAV 227 Query: 226 VEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE------------------------- 260 + VS + T VL E+ T E+ S+E Sbjct: 228 MSVSEVVETE-VLPWEVEKGETS----EEVAVSDEKPAKAAAAPAQAKQADEAPKTKKAP 282 Query: 261 -----STSIRVAVEKVDQLINLVGELVITQS-----MLAQRSSELDPVNHGDLITSMGQL 310 S ++RV + ++D L+NLVGELVI ++ +L + E D + QL Sbjct: 283 KAKKTSQTVRVDIGRLDSLMNLVGELVIGKARIERLVLESKLREFDE--------PLSQL 334 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 R + D+QE V +RM+P+ ++F R+PRL+RD++ LGK VEL + G TELD+++I+ I Sbjct: 335 GRISGDIQELVTKLRMVPVSFIFDRFPRLIRDISKNLGKDVELVIEGQETELDRTVIDEI 394 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DP+ HL+RNS+DHG+E+PE R AGK + G + ++A +G ++ IEV DDG G++ + Sbjct: 395 GDPMVHLIRNSVDHGVEIPEIRKTAGKPAQGTIRIAAYQEGNSVIIEVADDGKGIDPVAV 454 Query: 431 LAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 KA +G+ E MSDDE+ +F PGFS A++VTD+SGRGVGMD VKR ++ +GG Sbjct: 455 GKKAVERGMVTEEALAEMSDDEIIQFVFLPGFSMAKEVTDLSGRGVGMDAVKRKVEALGG 514 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 E++SK G GT + I LPLTLAI+ + VRV +E + +PL V E++ RE D+ + G Sbjct: 515 QFEVRSKVGEGTNVYIRLPLTLAIVLALLVRVGNETYAIPLENVDETILVREEDMKRMHG 574 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 L +RGE L + +L + E + VV++++G + +VD L+GQ ++V+ Sbjct: 575 RPVTL-LRGEVLTLGDLASTLDAVRDDEERNEYPVVVVRAGRNKIGFVVDALVGQQEIVI 633 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 K+L K+ GI+ ATILGDG+VALI+DV++L+ Sbjct: 634 KSLGRLLSKIKGIAGATILGDGNVALILDVASLK 667 >UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 Tax=Alphaproteobacteria RepID=Q20XD8_RHOPB Length = 686 Score = 349 bits (895), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 246/697 (35%), Positives = 369/697 (52%), Gaps = 64/697 (9%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D + F EA +L +E LL L D E ++ FRA H+IKG FGF + T Sbjct: 5 DPVEVFRQEASDLFEALEGALLDLGSRPDDRELIDTTFRALHTIKGSGAMFGFDKVATFT 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H E D+ R+GE++ + D+I++ L KD ++ ++A + + D+ D I LR+ Sbjct: 65 HEFETAFDQVRKGEIKASQDLISVALSAKDYIRALIEAPEST---DSIIGDAILDELRRF 121 Query: 127 ALEAKGETP-------SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE-- 177 P SAVT + + Q + R ++ R + +D L++ Sbjct: 122 VAPTADRGPDEEHSIASAVTTAPPAPATAGRGWQLHIEFDRDVL--RNGSNPLDYLDDLR 179 Query: 178 ELG--HLTTLTDVVKGADSL---------SAILPGDIAEDDITAVLCFVIEADQITFE-- 224 +LG T LT+ V D L L D I V FV + ++ E Sbjct: 180 KLGTAFATALTEDVPLLDELEPELCFLKWDVTLNSDCDRAAIDDVFMFVQDEMVLSCEPL 239 Query: 225 ----TVEVSPKISTP-----PVLKLAAEQA-PTGRVEREKTTRSNES----------TSI 264 V P I++P P + A +A P T+S ++ Sbjct: 240 PETAVVAPQPMIASPSLAPNPTVATAPRRAEPEADKPATAATKSKGDEQRRFDDKGMPTV 299 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG-QLQRNARDLQESVMS 323 RV +++D+L++ VGELVI Q+ L+Q ++ D ++ I ++ +++R A L+++ M Sbjct: 300 RVQAQRLDELMDRVGELVIAQARLSQLAAATDDIS----IKAIAEEIERLAAGLRDTTMG 355 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 RM+P+ +F R+ RLV DL+ LGK V+ G TELDK++IER+ DPL HL+RN++D Sbjct: 356 ARMVPIGSLFGRFRRLVHDLSRDLGKPVDFVTSGEDTELDKTMIERLADPLVHLIRNAID 415 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VS 442 HGIE R AAGK +G + ++A H G + + V D+GAGLN RI AKA QGL Sbjct: 416 HGIEDTASRAAAGKTEIGRIEIAAIHSGAQVLVTVRDNGAGLNAARIRAKAEEQGLIQPG 475 Query: 443 ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 +SDD+V L+F PGFSTA+ ++ +SGRGVGMDVVKR I M G ++I ++ G GTT+ Sbjct: 476 AVLSDDDVHQLLFQPGFSTAQTISTLSGRGVGMDVVKRTIDAMRGSIDISTQHGRGTTVT 535 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMES--LQPREADLHPLAGGERVLEVRGEYLP 560 + LPLTLAI++G+ +RV + +I+PL AV E L E + G L +RG+ +P Sbjct: 536 LRLPLTLAIIEGLLIRVGEGRYIIPLAAVEECAELSAEEERVR----GRDFLNMRGDLVP 591 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 + L +F V G + ++I SG R L+ DQ+IG HQ V+K+L + V Sbjct: 592 FLRLRDLFEVGGQPDRHQK--IIIASSGETRVGLIADQIIGSHQSVIKSLSKLHSDVTMF 649 Query: 621 SAATILGDGSVALIVDVSALQAINR---EQRMANTAA 654 S ATILGDGS ALI+DV+ L AI + + ++ N AA Sbjct: 650 SGATILGDGSAALILDVAQLLAIGQSLGDGKLTNEAA 686 >UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Tax=Clostridium RepID=A6M113_CLOB8 Length = 718 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 231/694 (33%), Positives = 373/694 (53%), Gaps = 75/694 (10%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F DE +E + +EQ +L L+ + ++ + IFR AH++KG + G+ ++ TH MEN Sbjct: 14 FLDEVEEQIQLLEQGILELEKKDEVSKVIQDIFRVAHTLKGSSSAMGYEKMKSLTHEMEN 73 Query: 72 LLDEARRGEMQLNTDIINLFLETKD---IMQEQLDAYKQSQEPDAASFDYICQALRQLA- 127 +LD+ R M++ IIN+ E D +++ YK E D D I LR + Sbjct: 74 VLDKIRNNFMEVTKPIINVLFECTDCLTLLKRDFIEYKNDTEVD---IDDIIGKLRCIQS 130 Query: 128 -----------LEAKGETPSAVTRLSVVAKSEPQDE---QSRSQSPRRIILSRLKAGEVD 173 + K E V +V + + ++ + R ++ +K E Sbjct: 131 IDVDKTEVNQFMGVKREISHEVDNKRIVFELDDDKRYTIENEKINGRSCVVCEIKISEDS 190 Query: 174 LLEEE-----LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI------------ 216 L++ L L + +V+ + ++ +L D ++IT + +I Sbjct: 191 LMKATRAFLILNLLNDMGEVIGSSPNVLELLDED---ENITTIKYLLISELGIKELESRI 247 Query: 217 --------EADQITFETVEVSP-KISTPPVLKLAA-----------EQAPTGRVEREKTT 256 +A+ +E ++ KI T + +A E +V +E Sbjct: 248 KHELMDVDDANVFDYEFTKLDKEKIDTKDIENIAKIEGEIVTDKIDEINGKKKVIQEIKN 307 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-------DPVNHGDLITSMGQ 309 S +IRV +E+++ ++NLVGE+VI Q+ +AQ S+ L D V DLI + Sbjct: 308 EKKLSQTIRVDIERLEHMMNLVGEMVIEQTRIAQVSNTLHNKYIADDSVE--DLIGISSR 365 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 + R +LQES+M RM+P++ +FSR+PRLVRDLA LGK+VEL L G TE+D+++IE Sbjct: 366 VSRVVSELQESIMKARMVPVQQLFSRFPRLVRDLANSLGKEVELVLEGGETEMDRTIIED 425 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 I DPL HLVRNSLDHGIE P R+ K S G L + A HQ ++ + + DDGAGLN E+ Sbjct: 426 ITDPLIHLVRNSLDHGIEKPSTRIVKDKPSKGTLRIKAFHQENHVIVTIEDDGAGLNLEK 485 Query: 430 ILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 I A + + +E +S+ E+ LIF G STA V+DVSGRGVGMD+V+ +I K+ Sbjct: 486 IKQSAIKKEVISAQEAETLSEQEIINLIFQTGLSTANNVSDVSGRGVGMDIVRNHIDKLN 545 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G +++++K+G G+ I LPLTLAIL G+ V++ +E++ LP++ ++E ++ + ++ + Sbjct: 546 GIIDVETKEGEGSKFTIKLPLTLAILAGLLVKIHNEIYALPMSNIIEIVRKPKNEIEYIK 605 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 + V+ +R + P+V L F + + + +V+L +R+ ++VD+L+G ++V Sbjct: 606 -NQSVVVIRDKVHPLVWLHDYFKLP-RENKKRNIFIVVLGIAEKRFGVVVDELVGNQEIV 663 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VK L S K+ GIS ATILGDGSVA I DV + Sbjct: 664 VKPLGSYIGKIEGISGATILGDGSVAHIFDVVGI 697 >UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Tax=Desulfovibrio RepID=B8DJV2_DESVM Length = 724 Score = 344 bits (883), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 187/402 (46%), Positives = 267/402 (66%), Gaps = 16/402 (3%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS-ELDPVNHGDLITSMGQ 309 ++E T R + SIRVA K+D L++LVGELVI Q+ L+Q + DP L+ + + Sbjct: 318 DKESTARDDSGASIRVAASKLDFLVDLVGELVIVQAQLSQAAHLRSDP----GLLGLVEE 373 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 L+R + +L+++ + IRM+P+ FS++ RLVRDL+ +LGK VEL +G TELDK++IER Sbjct: 374 LERLSDELRDTTLGIRMLPIGTTFSKFRRLVRDLSAELGKDVELVTLGGETELDKTVIER 433 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 + DPL H +RNS+DHG+E P+ R AAGK G + LSA H GG + I + DDGAG++ R Sbjct: 434 LGDPLVHCLRNSMDHGVESPDVRAAAGKPRTGTVTLSAAHAGGEVLITIADDGAGIDPAR 493 Query: 430 ILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 +L A +G+ + + E LIFAPGFSTAE+VT VSGRGVGMDVVKR+I+ + G Sbjct: 494 VLEIARRRGVIAPDVELPAREAIELIFAPGFSTAEKVTSVSGRGVGMDVVKRSIEALRGR 553 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ---PREADLHPL 545 +E+ S G GTT+ I LPLTLAI+DG+ V V E +++PLN V E + P AD Sbjct: 554 IELDSAVGRGTTLTIRLPLTLAIIDGLQVLVGGESYVIPLNHVEECAEHSTPSSAD---- 609 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 G +R++ +RGE +P + L ++F +G Q VV++ + G R+ L+VD ++G+HQ Sbjct: 610 -GRQRIINLRGEIVPYIRLRELFASSGPAPAIEQ--VVVVDAQGSRFGLVVDCVVGEHQT 666 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 V+K+L Y+ VPGIS ATI GDGS+ALI+DV L + +Q Sbjct: 667 VIKSLGRIYKDVPGISGATIKGDGSMALILDVPGLVQLAVDQ 708 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 1/93 (1%) Query: 35 PDAEQLNA-IFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLE 93 PD L A +FRA H+IKG FGF + TH +E + D R GE+ + +++L L Sbjct: 34 PDDRDLVARVFRAMHTIKGSGAMFGFDDIAHFTHDVETVFDRVRNGEVPVTRQLLDLTLA 93 Query: 94 TKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 ++D + + L+ PD A I +LR L Sbjct: 94 SRDHIAQLLNCAVTGDAPDLAHAAAITASLRAL 126 >UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acetobutylicum RepID=Q97MS3_CLOAB Length = 649 Score = 343 bits (881), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 207/644 (32%), Positives = 360/644 (55%), Gaps = 33/644 (5%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDA---EQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 +T+ E ++ D+E ++LQ E E +N IFR H++KG + F+ + E + Sbjct: 12 ETYMIETSGMVDDLEN--IILQNEEEKCYTDEVINKIFRIVHTVKGSSAMMSFNGIAELS 69 Query: 67 HLMENLLDEARRGEMQ--LNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E++ R + Q ++I +L L+ D ++++LD K +E + + I + Sbjct: 70 HSLEDIFYFIREEKSQSVRCSNISDLILDNVDFIKKELDKIKNKEEANGDPSELIANNKK 129 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 K E + V + + E R+ + + + + ++ E + Sbjct: 130 FFDSLKKQEFYKGI----VFFQKDCGMENIRAYTAVETL--KTISNDICYFPENILEDDD 183 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVI-----EADQIT-FETVEVSPKISTPPVL 238 + +K + L D + ++I V ++ + +IT E V ++ K + Sbjct: 184 TCNTIKES-GFKVFLKSDKSREEINKVFEAIVLLENFKISEITENEYVSITEKDKNRDIN 242 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 K+ ++ E+++ S+ + I V V KVD+L++L+GELVIT++M+ Q + +L + Sbjct: 243 KIPVKE------EKKENITSSAPSVINVNVNKVDKLMDLLGELVITEAMVIQ-NPDLRGL 295 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + + QL + ++LQ++VM IRM+P+ VF++ R+VRD++ KL K VEL L+G Sbjct: 296 EITNFSKAATQLHKVIKELQDTVMDIRMVPLANVFAKMKRIVRDMSKKLDKDVELKLIGE 355 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TE+DK++IE I DPL HLVRNS+DHGIE E+R GK G ++L A++ G ++ I + Sbjct: 356 ETEVDKNIIEHIADPLMHLVRNSIDHGIEDREQRKRCGKTEKGLVVLEAKNLGSDVVIRI 415 Query: 419 TDDGAGLNRERILAKAASQGLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG GL++ +IL KA +GL + EN +SD++ LI PGFST +VT+ SGRGVGMD Sbjct: 416 KDDGGGLDKNKILQKAKEKGL-IGENEIVSDEKTCSLILEPGFSTNNEVTEFSGRGVGMD 474 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV RNI MGG + + S +G GTTI + +PLTLAI+DG++V+V + +P + E + Sbjct: 475 VVSRNIGDMGGRINVSSSEGKGTTIILKIPLTLAIIDGINVKVGKSYYTIPTLDIKEFFK 534 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 P + + G ++ +RG P++ + + +N+ + + GI+++++ + + Sbjct: 535 PDSSKILSNMDGSEMITIRGRCYPVIRIHETYNLKTSVKNISDGILIMVEKNNKMTCIFA 594 Query: 597 DQLIGQHQVVVKNLE---SNYRKVPGISAATILGDGSVALIVDV 637 D+++GQ QVV+K+L N V G+S T+LGDG+++LI+DV Sbjct: 595 DEIVGQQQVVIKSLPEYIKNNNNVKGLSGCTLLGDGNISLILDV 638 >UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepID=B7HLT1_BACC7 Length = 670 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 229/689 (33%), Positives = 372/689 (53%), Gaps = 75/689 (10%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 +D FF+E++E L + +++L+L+ D + + IFR+AH+ KG + + F+ + + Sbjct: 3 TDLLNIFFEESEEHLQSLNENVLILEQNPTDMDVVGEIFRSAHTFKGMSASMEFTEMADL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYICQAL 123 TH MEN+LDE R G + ++ DII++ E D +++ + +Q D S +AL Sbjct: 63 THKMENVLDEIRHGNIVVHADIIDVIFECIDNLEKMVADVQQGGMGNIDVVSTKQKLEAL 122 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 L ET + + + ++ IL ++A + +E L Sbjct: 123 ----LNGNVETSMEHVEQESINNDDAVSHEVHITVEQQAILKAVRA--IMCIEA----LQ 172 Query: 184 TLTDVVKGADSLSAI------------LPGDIAEDDITAVLCFVIEADQITF-------- 223 + D+ K S+ I + D +E+++ V+ V E +++ Sbjct: 173 NIGDIQKTVPSIEEIEADAFGFEFTVFMNTDRSEEEVKQVVLHVSEIEKVVVKQGESLQE 232 Query: 224 --------ETVEVSPKISTPPVL---------KLAAEQAPTGRVEREKTTRSNESTSIRV 266 ET V I + V K A PT + K + E+ SIRV Sbjct: 233 VDSMVAMQETTRVEEMIQSSVVAQVEAPIETAKQPASATPTKSTAKTKNAKG-ENRSIRV 291 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSEL-DPVNHGDLITSMGQLQRNARDLQESVMSIR 325 +EK+++L+N+ E VI + R EL + + +LI + +L ++D+Q ++++R Sbjct: 292 QLEKIERLMNMFEESVIERG----RIDELAQAIQNKELIEHLNRLGDISKDIQNVLLNMR 347 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 M+P+E VF+R+PR+VR LA LGK+++L + G TE+DK +I+ I DPL HL+RN++DHG Sbjct: 348 MVPIETVFNRFPRMVRMLAKDLGKKIDLQITGEDTEVDKIVIDEIGDPLVHLIRNAIDHG 407 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---S 442 IE EKR AGKN G + L A H G ++ I++TDDG G+++ ++L KA G+ + Sbjct: 408 IETVEKRRDAGKNETGTIKLEAFHSGNHVVIQITDDGNGIHKGKVLEKAIKNGVVTESEA 467 Query: 443 ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 ++D EV LIF PGFSTAE V+D+SGRGVG+DVVK I +GGH+ I S++G G+T R Sbjct: 468 NKLTDREVFDLIFQPGFSTAEVVSDLSGRGVGLDVVKHTIHSLGGHLIIDSEEGKGSTFR 527 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I LPLTL+I+ M V+ D+ + LPL ++E+++ + D+ L G + VL R + + + Sbjct: 528 IELPLTLSIIQSMLVQTNDKRYALPLGNIVEAIRIKREDIQTLQGKD-VLNYRDQIIEVK 586 Query: 563 ELWKVF-----NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL------E 611 L VF + A E+ V+I+++ R Y L+V+ +IGQ ++V+K+L Sbjct: 587 HLSTVFGEKSVDEAFESYESQMVPVLIIRNTHRSYGLIVNTIIGQREIVLKSLGDFFAES 646 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSAL 640 SNY S ATILGDG V LI++ L Sbjct: 647 SNY-----FSGATILGDGRVVLILNPEGL 670 >UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L8C2_9DELT Length = 677 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 237/673 (35%), Positives = 368/673 (54%), Gaps = 50/673 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D Q F +EA ELL +E +L L+ + D+++++ +FRA H+IKG FGF + T Sbjct: 2 DHVQAFREEALELLETVEHTVLELEADPQDSDKVDKLFRAMHTIKGSGAMFGFDEVARFT 61 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E + D+ R G++ + D+++L L +D + L + E A + D + LR L Sbjct: 62 HQVETVWDQVRSGKLTADKDLLDLTLLCRDHILGLLS--RGEDEASAEASDGLSGRLRSL 119 Query: 127 A-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A LEA G+ +++ + R + L + L E+G L Sbjct: 120 AGLEADGDPAGPAPKVAADGPRPVPHAATWWLRYRPKADTYLSGQDPLGLLAEVGALGQA 179 Query: 186 TDVV--KGADSLSAILP------------GDIAEDDITAVLCFV---------------- 215 VV + L A+ P G ED + V FV Sbjct: 180 RAVVHAEATPPLEALDPEAVTVWWDVLLVGGAGEDALRDVFVFVEDEHDVLVSRLAKTAL 239 Query: 216 --IEADQI----TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 + D++ E + ++T +LAA + + + + + SIRV Sbjct: 240 RATDLDEVQALLAASAFEDAHALATDLDRRLAARVSRRAKPRPKPKDAGDGAASIRVEAS 299 Query: 270 KVDQLINLVGELVITQSMLAQRSSE-LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 ++D+L++LVGEL I QS L++R++ +DP G I +L+R A L++ + +RM+P Sbjct: 300 RLDRLVDLVGELAIIQSRLSERAAAGVDPA--GRAIAE--ELERVAARLRDETLGLRMVP 355 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 + ++ RLVRDLAG+LGK+ G TELDK +++++ DPL H++RNSLDHG+E Sbjct: 356 IGGLYGTLRRLVRDLAGELGKEAAFVGEGGDTELDKHVMDQLKDPLVHILRNSLDHGLES 415 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDD 448 PEKRLAAGK + G + L A+H GG + I +TDDG G++ ER+ KA +GL +D+ Sbjct: 416 PEKRLAAGKPAQGTVRLQADHVGGEVRIVITDDGGGVDLERVRQKALEKGLLAPGEEADE 475 Query: 449 EVAM-LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 + +F PGFSTA++V+ VSGRGVGMDVVKRNI+++GG V ++S+ G GTT+ + LPL Sbjct: 476 RTILNCLFCPGFSTAKEVSSVSGRGVGMDVVKRNIEELGGRVSLESRSGLGTTLTVRLPL 535 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAI+DG+ VRV +E +I+PL A L+ R D P A G V+ R + P + L ++ Sbjct: 536 TLAIIDGLQVRVGNEDYIIPLVAARACLE-RFLDADPPAVG--VVTWRDKMTPCLSLRRI 592 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 F VAG + V+++ +G L VD ++GQ Q V+K L YR+V +S T+ G Sbjct: 593 FGVAGPSPRYER--VIMVAAGDAEVGLAVDVVVGQRQAVIKKLSDVYRRVECVSGTTVNG 650 Query: 628 DGSVALIVDVSAL 640 DG+++LI+DV+ L Sbjct: 651 DGTISLILDVARL 663 >UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RX9_SULDN Length = 691 Score = 343 bits (879), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 220/676 (32%), Positives = 365/676 (53%), Gaps = 46/676 (6%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 Q F +E E+L ++ LL L+ D +N IFR H++KG A +FGF L E H Sbjct: 9 QIFLNECKEILEEIAPKLLNLEDTPNDKNLINDIFRGIHTLKGNANSFGFVKLGEFVHHF 68 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 E+LL R+ E L++ ++LF+ + DI+ + + + ++ I + +++ AL Sbjct: 69 EDLLSIYRKDESVLDSSEVDLFIRSFDIVGSVFEYEEDGVDGYPTNYYEILEEIKK-ALN 127 Query: 130 AKGETPSA------------VTRLSVVAKSEPQDEQS--RSQSPRRIILSRLKA-GEVDL 174 K + + V + SV+ K + Q + ++I +L+ ++ L Sbjct: 128 IKENSKESFEEIVSASSFAHVAQESVIVKKMVEHTQYNLKDIGDKKIYEIKLELDSDIYL 187 Query: 175 ----------LEEELGHLTTLTDVV--------------KGADSLSAILPGDIAEDDITA 210 L E LG L ++ SL L D E DI Sbjct: 188 RGYNHQIFFRLLESLGTLLYSNYIIDENIPTLEEFNTEHSYVKSLYIYLLSDSDEMDILD 247 Query: 211 VLCFVIEADQITFETVEVSP--KISTPPVLKLAAEQAPTGRVER-EKTTRSNESTSIRVA 267 V F+ + +++ V++ + + ++ T V+ K +S +SIRV Sbjct: 248 VFEFIAQEHEVSLSVVDLKELETLQEKESKEEESQSQETLYVQNGSKEHKSVAKSSIRVE 307 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 K+D+L + +GELVI QS ++Q + ++ +N +L + L ++ R +Q VMS+RM+ Sbjct: 308 SAKLDELFDSIGELVIAQSYISQ-NEKIRSINDNELNQYLEMLSKSTRIIQSKVMSLRMI 366 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ F + R+VRD++ K K++EL L G TE+DK++++++ +PL HL+RNS+DHGIE Sbjct: 367 PIRDTFLKMKRVVRDVSVKTSKEIELILSGEDTEIDKTMVDKLSEPLIHLLRNSVDHGIE 426 Query: 388 -LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENM 445 R+A GK GN+ LSA H+G + IE+ DDG G++ ++IL KA +G + Sbjct: 427 ESAHDRVALGKEECGNIYLSAAHKGSSFVIEIRDDGRGIDTQKILQKAIEKGFAKEGASY 486 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 + DE+ +F GFSTA +TD+SGRGVG+D V+++I+++ G V ++S+ G GT RI+L Sbjct: 487 TQDEIINFLFCAGFSTANSITDISGRGVGLDAVRQSIEELRGKVTVESELGVGTIFRIIL 546 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLAI+DG+++RV +E+ I+P +V+ES P D+H + G + RGE LPIV L Sbjct: 547 PLTLAIIDGLTIRVDNEMLIVPTLSVVESFSPIIKDIHYVKGEGEFINYRGEILPIVRLN 606 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 ++ + +KTE + + RY + VD+L+G+ QVV+K+L V IS A I Sbjct: 607 RLLGLNKSKTEFENSTFICIDHERGRYIIQVDELLGRQQVVIKSLGVLSNNVKEISGAAI 666 Query: 626 LGDGSVALIVDVSALQ 641 LG G +ALI++ ++ Sbjct: 667 LGTGQIALILNTEGVR 682 >UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=2 Tax=Deltaproteobacteria RepID=Q1NT42_9DELT Length = 804 Score = 342 bits (877), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 182/385 (47%), Positives = 262/385 (68%), Gaps = 10/385 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQR---SSELDPVNHGDLITSMGQLQRNARDLQE 319 SI+V +EK+D L+N VGELVI QS++ Q S DP L+ QL R DLQ Sbjct: 421 SIKVDIEKLDSLVNAVGELVIMQSLVRQNPLISKIADP----KLLKDFSQLGRITSDLQR 476 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 + MS+RM+P++ F + RLVRDLA K GK+V+L + G+ TE+D+++++ I DPL H++R Sbjct: 477 TAMSMRMVPIKQTFDKMIRLVRDLAKKSGKKVDLVMEGADTEIDRNMVDSIYDPLVHMMR 536 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGI+ PE+R GK G + L A +GGN+ IE+ DDG GL+ +I KA S+GL Sbjct: 537 NSVDHGIQPPEERAKHGKPPTGKVYLRAYQKGGNMVIEIEDDGEGLSSAKIRKKAESRGL 596 Query: 440 TVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 S ENMSD ++ LIF PGFSTA+Q+TDVSGRGVGMDVVK+ ++K+ G VE+ S+ G G Sbjct: 597 IQSGENMSDFDLNNLIFMPGFSTADQITDVSGRGVGMDVVKKAVEKLRGKVEVNSEAGKG 656 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 + I LPLTLAI+DG+ VRV E +I+P A+ ES++P + + + G L +RG Sbjct: 657 SLFTIRLPLTLAIIDGIIVRVGTERYIIPTIAIQESMRPERKNYNTVHGRGESLLIRGHL 716 Query: 559 LPIVELWKVFNVAGAK-TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +PIV L+++F + T+ +GIVV++++ GR ALLVD+L+G+ +VV+KNL + Sbjct: 717 VPIVRLYELFGLDDPSVTDPCEGIVVVVENEGRLRALLVDELLGKEEVVIKNL-GGMSDI 775 Query: 618 PGISAATILGDGSVALIVDVSALQA 642 G++ TILGDG V LI+D++ + A Sbjct: 776 RGVAGGTILGDGRVGLILDLAGIIA 800 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%) Query: 7 DFYQT------FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 DF Q F DEA E L +E H+L L+ D + +N IFR H+IKG +G Sbjct: 185 DFLQDTELLGGFLDEAFEHLESIEVHVLELEQNPDDLDSINNIFRPFHTIKGVSGFLNLM 244 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 + + +H ENLLD+ R G+ +++D+I+L L D +++ ++ K Sbjct: 245 TINKLSHATENLLDDVRNGKRPMDSDVIDLVLTVGDTLRQMVENIK 290 >UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJT3_DESAA Length = 757 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 173/392 (44%), Positives = 267/392 (68%), Gaps = 2/392 (0%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 I+V K+D ++++VGELVI +++L QR + + DL + QL R ++Q MS Sbjct: 367 IKVDTLKLDNMVDMVGELVINEAVLKQRLA-MAAGKDRDLAGDLAQLGRITSEIQRIAMS 425 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM+PM+ F + RLVRDLA K GK+V L ++G TE+D+++++ I DPL H+VRNS D Sbjct: 426 MRMIPMKNTFQKMIRLVRDLASKAGKKVNLEMMGEDTEIDRNVVDMIYDPLVHMVRNSAD 485 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS- 442 HGIE+P+ RLAAGK G +IL+A H+GGN+ IEVTDDG GL++E + AKA +GL S Sbjct: 486 HGIEIPKDRLAAGKPEAGTIILNAYHKGGNMIIEVTDDGRGLDKEALTAKAMEKGLIQSA 545 Query: 443 ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 E MSD ++ LIF PGFSTA++VTDVSGRGVGMDVVK + K+ G VE+ S++G GT+I Sbjct: 546 EGMSDQDIFGLIFHPGFSTAKKVTDVSGRGVGMDVVKGVLDKLRGKVEVMSRKGQGTSIL 605 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 + LPLTLA++DG+ VR ++ +++P +V+ES++P D H + ++++RG P++ Sbjct: 606 LKLPLTLAVIDGIIVRAGEQSYVIPTISVLESIRPNREDCHTVVNKGEMIKIRGSLYPLI 665 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L ++F+ + IVVI +S G++ +LVD+++G+ +VV+K+L + + V G++ Sbjct: 666 RLHELFDFPPNTRDPWDAIVVIAESEGKQKCILVDEILGKQEVVIKSLSAMLKNVVGLAG 725 Query: 623 ATILGDGSVALIVDVSALQAINREQRMANTAA 654 IL +G V +I+DV+ L ++ Q TA+ Sbjct: 726 GAILANGRVGMILDVAGLFSLVESQAEYLTAS 757 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 58/97 (59%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + ++F E+ E L+ +E H+L L+ E + + ++AIFR H+IKG +G + + Sbjct: 147 ELIESFIQESMEHLSTIEIHVLELEKEPDNLQLVDAIFRPFHTIKGVSGFLNLREINKLA 206 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD 103 H +E +LD+AR ++ ++ ++++ L+ D++ +D Sbjct: 207 HQIETVLDDARSKKISVSPSLVDIVLDGVDLVTRLID 243 >UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepID=Q1GMD6_SILST Length = 711 Score = 341 bits (875), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 183/466 (39%), Positives = 292/466 (62%), Gaps = 24/466 (5%) Query: 199 LPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRS 258 +PGD AE + A A+ T E + K+ T + E K+ + Sbjct: 259 VPGDSAEPETPAPFDVPAPAEATPMATSETTQKVETV-------------KPESNKSEQR 305 Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 ++RV +E+VD+LIN VGEL+I SMLAQ+ + LD + D+ T + + ARD+Q Sbjct: 306 GPKPTLRVDLERVDRLINAVGELIINHSMLAQQIANLDVADLRDVETELEGFKNLARDIQ 365 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 E VMSIR P++ +F R R+VR+ + K +L G +TE+DK++IER+ DPLTH++ Sbjct: 366 EGVMSIRAQPVKPLFQRMARIVREASSATEKSAKLITEGENTEVDKTVIERLSDPLTHIL 425 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RN++DHGIE PE R AAGKN G + LSA H+ G++CIE+ D+GAG+NR R+ A +G Sbjct: 426 RNAVDHGIEKPEDREAAGKNRTGEIRLSASHRSGSVCIEIKDNGAGINRPRVKQIAIEKG 485 Query: 439 LTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 L + EN ++D E+ L+F PGFSTA++V+++SGRGVGMDVVK + +GG + + S G Sbjct: 486 L-IPENADLTDAEIDNLLFLPGFSTAKEVSNLSGRGVGMDVVKNAVTALGGRINVSSTPG 544 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 G+T I+LPLTLA++DGM V VAD+ ++P+ +++E+++ + ++ L +L +RG Sbjct: 545 KGSTFTIILPLTLAVMDGMVVSVADQTMVVPITSIIETMRGSDDMINSLGADGTLLSIRG 604 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYR 615 ++PI ++ + + + G+ +++++ G+R AL VD + Q QVV+K+L+ Sbjct: 605 NFVPICDVAGALGLRKPEGDKPPGVYLLVETETGQRSALAVDDIHDQRQVVIKSLDGVCG 664 Query: 616 KVPGISAATILGDGSVALIVDVSALQA-------INREQRMANTAA 654 +PG++AATILGDG +A+I+D ++ A + ++RM+N A Sbjct: 665 NIPGVAAATILGDGKIAMILDSESIIAASPTSATFDSDRRMSNAIA 710 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 45/78 (57%) Query: 23 MEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQ 82 M++ L ++ D E +NA+FRA HSIKGGAG FG L H E + DE R ++Q Sbjct: 20 MDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDDLVAFAHKFETVFDEVRSNKLQ 79 Query: 83 LNTDIINLFLETKDIMQE 100 L+T +I L L D + + Sbjct: 80 LDTKLIQLLLRCSDHLSD 97 >UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28NF4_JANSC Length = 748 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 173/385 (44%), Positives = 266/385 (69%), Gaps = 4/385 (1%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 KTT + ++ IRV E+VD+LINLVGELVI ++ML+Q +L+ N D++ + L++ Sbjct: 334 KTTAAPQT--IRVDFERVDKLINLVGELVIKEAMLSQAVEKLNLTNGNDVLQEIEGLKQL 391 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 A ++QE VM+IR P++ +F R R +RD + GK+V LT+ G + E+DK+++ER++DP Sbjct: 392 AGEIQEGVMAIRAQPVKPLFQRMARTIRDASTTTGKRVRLTMKGEAAEVDKTVLERLVDP 451 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L H+VRN++DHG+E E+R+AAGK + G + LSA H+ G + IE++DDG G+NR+++ Sbjct: 452 LNHMVRNAVDHGLESAEERIAAGKPAEGTVTLSAAHRSGRVVIEISDDGGGINRDKVRQH 511 Query: 434 AASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A S+GL + + ++ EV L+F PGFS E+V+++SGRGVG+DVV+ I +GG + I Sbjct: 512 AESRGLVLPDATLTPSEVDALLFMPGFSMKEEVSELSGRGVGLDVVRSEISALGGRMSIS 571 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT I LPLTLA+L+GM V VA + ++P+ A+ E+LQP A +H + G RVL Sbjct: 572 SELGKGTDFSISLPLTLAVLEGMVVEVAGQTMVVPITAIQETLQPSTAQIHTIGSGGRVL 631 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLE 611 +R +PI +L +F + +++++++ +R AL+VD+L Q QVV+K+LE Sbjct: 632 SIRNTLVPIEDLGAIFGFRDTPMDLDDRVLLVIETETEKRCALIVDRLQDQRQVVIKSLE 691 Query: 612 SNYRKVPGISAATILGDGSVALIVD 636 +NY V GI+AATILGDG +ALIVD Sbjct: 692 TNYSHVSGIAAATILGDGRIALIVD 716 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 48/91 (52%) Query: 36 DAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETK 95 D E ++ +FRA HSIKGG+G FG L H E LD R G+ + + D+++LF Sbjct: 37 DDETIHVVFRAVHSIKGGSGAFGLDDLVAFAHHFETALDRVRAGKTESSDDLLSLFQLCG 96 Query: 96 DIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 D + + + A + + A + + + L ++ Sbjct: 97 DHLSDLVAAARNGDAVEPAQAEALSRQLDEV 127 >UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEU3_BACSK Length = 648 Score = 341 bits (875), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 222/661 (33%), Positives = 357/661 (54%), Gaps = 51/661 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D+ F +EADE L M LL L+ + D + + IFR+AH++KG + T GF+ + E T Sbjct: 5 DYIGMFLEEADEHLQAMNAKLLQLEQDPFDKDAIAEIFRSAHTLKGMSATMGFNAMAELT 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLET------------------------KDIMQEQL 102 H +ENLLD R G ++ I+L + +D + L Sbjct: 65 HSLENLLDAMRDGNIEAGAGEIDLLFDAVEYLEASVSHVRNTGGELEEANGLRDTFAQLL 124 Query: 103 DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 ++S AAS D A+ A++ P V + + D+ + + R Sbjct: 125 GQERKSANEVAASLDTDTHAVMDQAVQDG--VPVQVIHVEI-------DDNAALKGVRAF 175 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKG--ADSLSAILPGDIAEDDITAVLCFVIEADQ 220 +++ A +L+ E + ++ +G A + + + DI L + E Q Sbjct: 176 MVASEAAQFGELIHTE----PSREELEEGKFASGFTLTAATTLPDSDIKKRLEGISEVKQ 231 Query: 221 ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE 280 +T + K K +AP+ + K ++ + T IRV VEK+D L+ L E Sbjct: 232 VTVTAYKPQKKADKA---KSQTAKAPSEKGAGAKGEQAQQKT-IRVNVEKLDSLMYLFEE 287 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LV+ + L ++ L +L ++ R LQE ++S+R+MP+E VFSR+PR+V Sbjct: 288 LVVEKGRLELVANSLQT---DELTNVFEKVSRITSHLQEVMLSVRLMPLEPVFSRFPRMV 344 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 R ++ ++GKQ+ + G +TELD+++I+ I DPL HL+RNS+DHGIE P R +GKN Sbjct: 345 RKVSKEIGKQIRFVIEGETTELDRAIIDEIGDPLLHLLRNSIDHGIEEPAVRQKSGKNPE 404 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAP 457 G ++L A + G ++ IE+ DDGAG+ +E++L KA L +E M+ DE+ L+FAP Sbjct: 405 GLIVLRAFYSGSHVVIEIEDDGAGIKQEKVLKKAIENELITAAEAEKMASDEINNLLFAP 464 Query: 458 GFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSV 517 GFSTA +VTD+SGRGVG+DVVK MGG + + SK+G GT I LPLT++I+D M V Sbjct: 465 GFSTANEVTDLSGRGVGLDVVKSTFSAMGGEIAVSSKEGEGTRFSISLPLTVSIIDAMMV 524 Query: 518 RVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 + +++ P+ + E+ ++++L A G+ + E RG+ +P+V L + F + K + Sbjct: 525 ELGSDIYAFPIANIAETAYVQKSELKQ-ADGQSLFEWRGQLVPLVSLNEQFGLP-EKEDE 582 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 + V++L A+ VD+ IG+ +VV+K L S + GIS TILGDG++ALIVD+ Sbjct: 583 QELAVLMLYRNQTLMAVKVDRFIGKQEVVLKPLGSLLKGTKGISGGTILGDGTIALIVDI 642 Query: 638 S 638 + Sbjct: 643 A 643 >UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPQ3_9BACT Length = 785 Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 240/658 (36%), Positives = 367/658 (55%), Gaps = 68/658 (10%) Query: 1 MSMDISDFYQT-----FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 MS DI+D Q F E+ E L +Q LL ++ D + LN +FR H+IKG AG Sbjct: 1 MSGDINDDLQAELIKDFLLESSEGLETFDQDLLEIEKGDSDPQLLNQVFRVVHTIKGTAG 60 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 GF+ ++ H EN+L R GE++ DI + L+ D ++ LD +S D ++ Sbjct: 61 CLGFNRIESIAHTGENVLSMMRDGELESTPDIADALLKLSDALRAILDVI-ESCGSDESA 119 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 +Y LR L L V K EP + +++ + EVD Sbjct: 120 GEY--NDLRSL--------------LDSVKKGEPLGSADVDELALDPMVNHHQ--EVD-- 159 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV--LCFVIEAD---QITFETVEVSP 230 G D ++L+A + + ++ A L V EA + E ++ P Sbjct: 160 ----GSWGLFEDDEPTVEALAAEISEPVVAEEAAAGWGLFDVAEASGEASVAKENLDTKP 215 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 K TP + + + EK + ++RV V+ +D L+N+VGELV++++ L Q Sbjct: 216 KEKTPEISR-----------KLEKVS----GATVRVDVDLLDTLMNMVGELVLSRNQLLQ 260 Query: 291 RSSE--LDPVNHGDLITSMGQ-LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 S + + P I+S+ Q + +LQ+ VM RM + V+ +YPR+VRDLA L Sbjct: 261 VSQQRVITPAE----ISSLSQRFNQVTTELQQGVMKTRMQAIGSVWGKYPRIVRDLASDL 316 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GKQV L G+ TELD+++IE I DPLTH++RN++DHGIE PE+R AA K +V L++ A Sbjct: 317 GKQVSLETFGADTELDRTIIEAIKDPLTHIIRNAVDHGIESPEERAAADKPAVAQLLMRA 376 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQ 464 H+GG + IE+ DDGAG+N ER+ KA +GL E +++ E+ LIF PGFSTAE+ Sbjct: 377 FHEGGQVNIEIVDDGAGINGERVCRKAIDKGLISDEEATRLTEREMINLIFLPGFSTAEK 436 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 +++VSGRGVGMDVVK NI+K+GG V+IQS G GT++RI +PLTLAI+ + V+ A + F Sbjct: 437 LSNVSGRGVGMDVVKTNIEKIGGSVDIQSSIGRGTSLRIKIPLTLAIVPALVVKSAAQRF 496 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLE-----VRGEYLPIVELWKVFNVAGAKTEATQ 579 +P +++E L E D + E+V + +RGE LP+V L + ++ K EA Sbjct: 497 AIPQVSLVE-LVRLEGD-QAVEAVEQVYDSPVFRLRGELLPLVFLDRALKISKPKAEAPT 554 Query: 580 GI-VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 I +V+L++ + + L+VD++ ++VVK L + +P + ATI+GDGSVA+I+D Sbjct: 555 TISIVVLRADRQIFGLVVDEVSDTEEIVVKPLGHQLKGLPLYAGATIMGDGSVAIILD 612 >UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFX8_HAHCH Length = 709 Score = 340 bits (873), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 253/733 (34%), Positives = 386/733 (52%), Gaps = 110/733 (15%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D S + F E+ +LLA+MEQ LL L+ E E ++A+FRAAH+IKG G FG Sbjct: 1 MSLDFSGALKAFAQESKDLLAEMEQSLLTLEEEGAKKELVDAVFRAAHTIKGSGGLFGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E +LD R G + ++ D+I+L L D + +++ + +A Sbjct: 61 HVVAFTHDVEGVLDAVRDGRLDIDGDLISLLLSCGDQIGRLVESSLAGEVEEA------- 113 Query: 121 QALRQ-LALEAKGET--PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 LR+ AL+A+ + P AV V A+ E E + I L+ G DLL + Sbjct: 114 -LLRKGAALQAQLQRYLPGAVM---VAAQEEDAGEAAYGARGWHI---SLRCGR-DLLRD 165 Query: 178 E------LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT--------- 222 L +++TL ++ + + +P D + L F E D IT Sbjct: 166 GMDPLSILHYISTLGELTR-VTTFCGHMPAAEEMDPESCYLAF--EIDLITEQAKEEIED 222 Query: 223 -FETVEVSPKISTPPV-----LKLAAEQAP------------TGRVER---EKTTRSNES 261 FE V S ++ PV A E AP +G V R E+ + E Sbjct: 223 AFEFVSASSEVRITPVGDPDSWDGAIEAAPDEDQRLGEILLDSGAVTRNELEQALKQQER 282 Query: 262 T-------------------SIRVAVEK--------------------VDQLINLVGELV 282 T ++ A+EK +D LINL+GEL+ Sbjct: 283 TPERPKLGEILVARHAVQEKTVSTALEKQASAVKKQRQDSFLKVDAQKLDHLINLIGELM 342 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 I + + R+ + + L S+ R +++ +S+RM+ + F+R+ R+VRD Sbjct: 343 IANAEVRVRA---ERIQESVLHESVANSTRFIEAVRDCALSLRMVQIGDTFNRFQRVVRD 399 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 LA LGK + L + G T+LDK+L+ERI +PLTHLVRN++DHG+E R GK + G Sbjct: 400 LARDLGKDIRLVVSGGDTDLDKTLVERISEPLTHLVRNAIDHGVESDALRRERGKAATGV 459 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFST 461 + L+A H+ G+I IEV+DDG G+N E+I+AKA + L SE MSD ++ LIF PGFST Sbjct: 460 IRLNAFHERGSIVIEVSDDGGGMNPEKIVAKAIEKQLIRSSEGMSDGDIFKLIFEPGFST 519 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 AEQVT+VSGRGVGMD VK+ ++++ G VE++S+ G G+TIR+ LPLTLAI++G V V D Sbjct: 520 AEQVTNVSGRGVGMDAVKKTLEELRGSVEVESELGKGSTIRLRLPLTLAIINGFLVGVGD 579 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 +++P+ V E ++ L+ GG+ + +RG LP + L ++F++ G A + Sbjct: 580 SKYVVPMEVVDECVE-----LNGDGGGD-FMGLRGMALPFLRLRELFSIDG--RPADRQS 631 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VV++Q GRR L+VD+L+G+ Q V+K L + + +S T+LG G V LI+D+ L Sbjct: 632 VVVVQYAGRRAGLVVDRLMGELQTVIKPLGDIFTPLKWVSGCTLLGSGDVGLILDIPEL- 690 Query: 642 AINREQRMANTAA 654 + R + N A Sbjct: 691 -VTRAEHAQNQFA 702 >UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR56_OPITP Length = 730 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 173/379 (45%), Positives = 254/379 (67%), Gaps = 1/379 (0%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV EK+D L+++VGELVI QS L + + + V L ++ QL R ++LQ + M Sbjct: 348 TVRVNTEKLDSLMDVVGELVIVQSQLLETARHHNDVTGSPLQRNVAQLSRITKELQHTAM 407 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 S+RM+P++ F + RL RDLA GK+V G TELD++++E I DPL H+VRN+L Sbjct: 408 SLRMIPIKQSFQKMERLARDLARDFGKKVSFVTSGEDTELDRTVVEEIGDPLVHMVRNAL 467 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV- 441 DHG+E P +R+AAGK G L L A HQG NI IE+ DDG G+N ++I KA +GL Sbjct: 468 DHGLEPPAERVAAGKPETGVLHLKAYHQGSNIVIELQDDGRGINPDKIYQKAIEKGLIAP 527 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 ++ +E+ L+FAPGFSTAE+VT VSGRGVGMDVVKRNI+K+ G +EI S+ G+T Sbjct: 528 GTTLAKEEILALVFAPGFSTAEKVTAVSGRGVGMDVVKRNIEKLRGKIEINSEVKRGSTF 587 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 ++ LPLT+AI+DG+ VRV ++ FILP +V +L+P + + G VL++RG +PI Sbjct: 588 KVKLPLTMAIIDGLVVRVGEDRFILPSTSVQRALRPSRESVATVQGQGEVLDLRGRLVPI 647 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L + F + +GIVVI++ G+ ALLVD+++ + +VV+KNL + + +PG++ Sbjct: 648 HRLHRRFGIPHQAENPWEGIVVIVEHSGKISALLVDEMVSKQEVVIKNLGAFMQGLPGVA 707 Query: 622 AATILGDGSVALIVDVSAL 640 ILGDG++ALI+D + L Sbjct: 708 GGAILGDGNIALILDPATL 726 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F+ EA + L +E LLVL E + E LN+IFR+ H+IKG AG G + Sbjct: 144 ELLSEFYGEAVDHLQQIEAALLVLDHEPENPEALNSIFRSFHTIKGNAGFLGLVPMHTLA 203 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKD----IMQEQLDAYKQSQEP-DAASFDYICQ 121 H +E+LLD AR +++LN II L ++D + Q+ A ++ Q P S ++ + Sbjct: 204 HEVESLLDLARNHKLKLNAAIITEILRSRDALQALTQQVAKALEKGQLPTQIISVSHLIR 263 Query: 122 ALRQLALEAKG 132 A+ +L+ G Sbjct: 264 AVHRLSESPAG 274 >UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BIY1_TERTT Length = 701 Score = 338 bits (868), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 240/714 (33%), Positives = 383/714 (53%), Gaps = 89/714 (12%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 TF +EA E L E+ LL L+ +A ++ FR+ H+IKG G G+ L H +E Sbjct: 7 TFQNEAREHLQLFEESLLELEDNPHNAGCIDQAFRSIHTIKGAGGIVGYRELCNFAHHVE 66 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE----------------PDAA 114 N++D+ R GE +++++I+ FL+ KD +Q L + PD A Sbjct: 67 NVMDKIRSGEYDISSELISFFLDAKDHIQAMLPNPEPESHLIIEGQQLLEKLYKVLPDEA 126 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + +E + + + V R+ + P + ++ R +L L Sbjct: 127 DQNSVSTPFESATVEQEEKPATKVFRI----RFTPDADSFKNGFDVRPLLRELGG----- 177 Query: 175 LEEELGH--LTTLTDVVKGADSLS---AILPGDIA------EDDITAVLCFVIEADQITF 223 LGH +TT+T + ++L + + D+ + + V FVI+ + Sbjct: 178 ----LGHCQVTTITHDLPDFNALQPQHSAMRWDLTLLTEQPQSSVDDVFIFVIDDWTLEI 233 Query: 224 ETVEVSPK----------------ISTPPVLKLAAEQAPTGRV----------------- 250 E ++++ K IS + AE G++ Sbjct: 234 EEIDLTDKDAISDKLGELLIARGIISQNQLSDALAENREVGKILQDQGLVKDDDIKAALA 293 Query: 251 ------EREKTTRSNES--TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E +K T ++ S T++RV +++D+L+NLVGELVI Q+ L Q +++ + + G Sbjct: 294 EQQVTRETKKQTGNDSSAETTVRVPADRLDKLMNLVGELVIVQARLNQVATKRE--DEGV 351 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L S L R +L+++ S+RM+P+ F RY RLVRD++ L K++ L G+ TEL Sbjct: 352 LAISE-DLDRLTTELRDNTFSLRMLPIGSTFGRYRRLVRDVSRDLNKKIVLHTEGAETEL 410 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK +I+++ DPL HL+RNS+DHGIE P R AAGKN+ G ++L A+H + IEV DDG Sbjct: 411 DKMMIDKLADPLVHLIRNSIDHGIEPPADREAAGKNTTGTILLRAQHSDSQVKIEVHDDG 470 Query: 423 AGLNRERILAKAASQGLTVSENMSDDE-VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL+ I AKA +GL ++ D+E + LIF PGFSTA+ V+++SGRGVGMDVVKR+ Sbjct: 471 RGLDTGIIFAKAVEKGLVAADAHLDNESIFKLIFEPGFSTAKTVSEISGRGVGMDVVKRS 530 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 IQ +GG + +QS+ G GT RI LPLT AI++G+ V+V++E ++LPL+ V E ++ + + Sbjct: 531 IQDLGGKLAVQSELGEGTHFRISLPLTTAIIEGLMVQVSNERYVLPLSVVEECVEIKSS- 589 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 R+ +VR + +P + L + F ++G + Q +VI++ G R+ VD++IG Sbjct: 590 ATKTNDRRRLAKVRDQRIPYMRLREWFRLSGIIPDIEQ--IVIVRLGEERFGFCVDEVIG 647 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ-AINREQRMANTAA 654 Q+Q V+K L Y G S ATILGDGSVA+I+D +L+ AI E + + A Sbjct: 648 QYQTVIKRLGKMYENTVGYSGATILGDGSVAIILDPLSLRDAIQHEVEILDKAG 701 >UniRef50_C1A592 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A592_GEMAT Length = 577 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 181/407 (44%), Positives = 259/407 (63%), Gaps = 5/407 (1%) Query: 236 PVLKLAAEQAPTG---RVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 PV + AP + + T S+ +IRV +++D+LI++VGELVI Q+++A Sbjct: 153 PVARDGEADAPAAAGQQANAKARTESSGDATIRVRTDRLDRLIDMVGELVIAQTIIAGDD 212 Query: 293 SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 + +D +L + + R+LQ+ MS+RM+P+ F + R+VRD A K GK V+ Sbjct: 213 T-IDSTTQHELQRKVTHAGKIVRELQDLSMSMRMVPLRPTFQKLARVVRDTAAKAGKTVQ 271 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 G E+D+++++R+ DPL H+VRN++DHG+E P++R A GK +G + L A H G Sbjct: 272 FITEGDDVEIDRNMVDRLSDPLVHMVRNAVDHGVEPPQERQANGKAPMGIVRLRAYHASG 331 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 N+ +E+ DDG GL+RE+I+ K + L + MSD +V LIFAPGFSTAE+VTD+SGR Sbjct: 332 NVVVELIDDGRGLHREKIVKKGLEKKLIETDKGMSDSDVFNLIFAPGFSTAEKVTDISGR 391 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVV+RN++ + G ++I S G GTT I LPLTLA+ DGM VRV E FI+PL + Sbjct: 392 GVGMDVVRRNLEVIRGRIDITSAPGHGTTFAIRLPLTLAVTDGMLVRVGQERFIVPLTHI 451 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 S +P + L +AG V+ +RGE +PIV L ++F V A G+++I+ G RR Sbjct: 452 HMSFRPEPSMLSTVAGKGEVVLLRGELMPIVRLHRLFGVDDAVQSPLDGLLMIVGDGNRR 511 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 ALLVD L+GQ QVV K L KVPG+S ILGDG V LI+DV+ Sbjct: 512 TALLVDDLLGQQQVVAKTLGEGLGKVPGVSGGAILGDGRVGLILDVN 558 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 5/122 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D F E+ E + + E LL L+ D E +N +FRA H++KG + G + + E Sbjct: 8 DLLSDFIAESGECVTNSESALLQLEENPTDEEAVNTVFRAFHTVKGTSAFLGLTRVAEFA 67 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA-----ASFDYICQ 121 H E+LL R E+ +L L + D++++ L A +++ D A +D + Sbjct: 68 HEAESLLSRVRDKEISYTRGCADLSLRSVDMLKDLLAAVEKALASDGRCLLPAGYDELKD 127 Query: 122 AL 123 A+ Sbjct: 128 AV 129 >UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=C7I593_THIIN Length = 746 Score = 338 bits (867), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 190/416 (45%), Positives = 271/416 (65%), Gaps = 24/416 (5%) Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT---QSMLAQRSSELDPVNH 300 QA + ++ K RS ++ +RVA +K+D LINLVGELVI ++ AQ +S+ Sbjct: 338 QAALDKQKQIKDKRSRDNQMLRVAADKLDALINLVGELVIASAGNALHAQNASQ------ 391 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 I + Q+ R D++E + +RM+ + F+R+ R+VRD++ +LGK + L + G+ T Sbjct: 392 ---IEAAAQITRLVEDIRERALKLRMVEIGETFARFQRVVRDVSRELGKDIALVIEGADT 448 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK+L+ERI DPL HLVRNS+DHGIE PE R A GK + G L L+A H G+I I V+D Sbjct: 449 EMDKTLVERIADPLMHLVRNSIDHGIESPEVRTARGKPAQGTLKLAARHDSGSILITVSD 508 Query: 421 DGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG GLNRERILAKA +GL +E + D EV LIF PGFSTA+ VTD+SGRGVGMDV Sbjct: 509 DGGGLNRERILAKAVERGLISTEAAAALPDAEVWALIFEPGFSTADAVTDLSGRGVGMDV 568 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VKRNI+ + G ++IQS G GT + + LPLTLAI+DG V+ A F+LPL+AV+E ++ Sbjct: 569 VKRNIEAIRGSIDIQSSAGVGTQMHLRLPLTLAIIDGFLVQAAGRTFVLPLDAVIECME- 627 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALL 595 P + + +RGE LP++ L + + + A + T+ VV+ Q GG+R ++ Sbjct: 628 ----FAPAQPQQGYINLRGEVLPLLHLREQLGLTDSAADSPNTRSNVVVAQIGGQRAGIV 683 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 VD L+G++Q V+K L + + + GIS +TILG+G VALI+D + L I+R R A Sbjct: 684 VDALLGEYQTVIKPLGALFAHLQGISGSTILGNGEVALILDAAPL--ISRASRSAQ 737 Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 66/103 (64%), Gaps = 9/103 (8%) Query: 10 QTFFDEADELLADMEQHLLVLQP---------EAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 ++F EA ELL ME+ L+ L+P EA D E +NA+FRAAH+IKG AG FG Sbjct: 12 RSFIVEAQELLEGMERGLMELEPQGSADDVNDEALDGEHINALFRAAHTIKGSAGLFGLD 71 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD 103 + TH +E++LD+ R G++ ++++++ L L+ +D + + +D Sbjct: 72 GIVRFTHHLESVLDQMRAGKLAVSSELVALLLQGRDHLAQLID 114 >UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAD1_9DELT Length = 725 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 204/480 (42%), Positives = 299/480 (62%), Gaps = 26/480 (5%) Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 +RLKA E E+E L +++ I GD+ E DI L QI E Sbjct: 259 ARLKADEAAFNEDEDLEAPRLGEIL--------IQSGDVTEADIRDALSKQKPLGQILAE 310 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES-TSIRVAVEKVDQLINLVGELVI 283 +V+P+ V + A + E++ + + E+ +SIRVA +K+D L++LVGELVI Sbjct: 311 EGKVAPEKVEQAVRRQAEAK------EQDASRKQQEALSSIRVAADKLDYLVDLVGELVI 364 Query: 284 TQSMLAQRSSEL-DPVNHGDLITSMGQ-LQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 Q+ + Q SE DP +T++ + L+R + +L++S + IRM+P+ +S++ RLVR Sbjct: 365 VQAQITQVVSERNDPT-----MTALAEELERLSDELRDSTLGIRMLPIGTSYSKFRRLVR 419 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DL+G LGK++ L VG+ TELDK++IER+ DPL HL+RNS+ HGIELP++R A GK + G Sbjct: 420 DLSGSLGKEINLVTVGADTELDKTVIERLGDPLVHLLRNSIGHGIELPDERKAQGKPAQG 479 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFS 460 + LSAEH GG + + + DDG G++ I K +GL ++ ++ ++ LIF PGFS Sbjct: 480 TIYLSAEHSGGEVLVRIKDDGRGMDPTIIREKGIERGLIAADAELTKKDLLKLIFEPGFS 539 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TA++VT+VSGRGVGMDVVKR I + G +EI S G GT I I LPLTLAI+DG+ VRV Sbjct: 540 TAKEVTNVSGRGVGMDVVKRAIDSLRGSIEIDSTLGKGTFITIRLPLTLAIIDGLQVRVG 599 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 D +++PL+ V E ++ +D+ + +R+L +RGE +P V L F V G Q Sbjct: 600 DGYYVIPLSLVEECVELAASDMDE-SSRQRILHLRGEIVPYVHLRDWFGVEGDSPPIEQ- 657 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +VI G R ++VD +IG+HQ V+K+L Y+ V GIS ATI GDGS+ALI+D+ +L Sbjct: 658 -IVITGVEGSRVGIVVDTVIGEHQTVIKSLSRVYKDVEGISGATIKGDGSIALILDIPSL 716 Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%) Query: 34 APDAEQL-NAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFL 92 +PD L N IFRA H+IKG FGF + TH +E+ D R + + ++ L L Sbjct: 31 SPDDMALVNQIFRALHTIKGSGSMFGFDDIAAFTHEVESTFDMVRNNALGVTPELCGLAL 90 Query: 93 ETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 ++D ++ L A + E D+ I Q L+ L Sbjct: 91 RSRDYIKLLLGA-TEGDEVDSTERQAILQGLQALC 124 >UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HM7_THICR Length = 650 Score = 337 bits (864), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 233/659 (35%), Positives = 353/659 (53%), Gaps = 43/659 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q F EA EL+ +++ L+ L+ D++ LNAIFR H+IKGGAG G + L E Sbjct: 4 EILQDFLVEASELVEQLDEQLVELENSPSDSDLLNAIFRGFHTIKGGAGFLGVTPLIEVC 63 Query: 67 HLMENLLDEARRGEMQLNTD----IINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H EN+ D+ R G+++ ++ I+ F D +Q+ D ++ +E D + Sbjct: 64 HRAENVFDKIRNGDVEYDSTAADVIMRAFDVITDYIQQLNDGARELEEADEGLLSELD-- 121 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV--DLLEEELG 180 AL G TP SEP E+ S + GE+ D E L Sbjct: 122 ----ALWKGGATPQPA--------SEPAQEEMTSHPKLELPEGVDPDGEISDDEFEALLN 169 Query: 181 HLTTLTDVVKGADSLSAI---LP------GDIAEDDITAVLC--FVIEADQITFETVEVS 229 L+ + LP GDI +D+ A+L ++E Q ETV + Sbjct: 170 QRDALSGSDSSESETEEVKLALPDDVDPDGDITDDEFEALLNQRDMLEGIQEPQETVSAT 229 Query: 230 PKISTPPVLKLAA-----EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 P + V E P + EST +RV ++D+++NLVGELV+ Sbjct: 230 PPPAPETVKPTPPPAPKKESKPETPKPEASKAATAEST-VRVDTRRLDEIMNLVGELVLV 288 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 ++ L S P L ++G L DLQ SVM RM P++ VF R+PR+VRDLA Sbjct: 289 RNRLLTLRSSDGPEEA--LSNAVGNLDHVTTDLQASVMKTRMQPVKKVFGRFPRVVRDLA 346 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 KLGK++EL L G T+LDK+L+E + DPL HLVRNS+DHG+E+P+ R AGK G +I Sbjct: 347 RKLGKEIELELKGEETDLDKNLVEALADPLVHLVRNSVDHGVEMPDVREQAGKPRKGTVI 406 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAM-LIFAPGFST 461 L+AE +G +I + +TDDG G++ + + KA +G+ VS N DD+ A LI + GFST Sbjct: 407 LAAEQEGDHILLSITDDGKGMDPDVLRRKAVEKGMMDEVSANQLDDKAAFELIMSAGFST 466 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 A+Q++D+SGRGVGMDVVK I K+ G ++I S G GT I+I +PLTLAIL + V D Sbjct: 467 ADQISDISGRGVGMDVVKSMITKLNGSIDINSVLGEGTQIKIRVPLTLAILPTLMVSFED 526 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 + + +PL +V E + ++ + G+ ++ +R + +P++ L K Sbjct: 527 DSYAIPLTSVQEIFDYDASQINRI-DGQMMVRLREKSIPLLFLSDWLAPDQVKENYEGDK 585 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V+I+ G +R L+V+Q+ GQ +VV+K L + + G + ATI G+G++ALI+D+ + Sbjct: 586 VIIVSIGNQRAGLVVEQVNGQEEVVIKPLGVMMKHLEGYAGATITGNGNIALILDLPGV 644 >UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G689_GEOUR Length = 671 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 227/666 (34%), Positives = 373/666 (56%), Gaps = 51/666 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQPEA------PDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + F EA+E++ + L+ L A PD +N+IFR AHS+KG AG FGF+ + Sbjct: 13 KDFLAEAEEIIDQLSLDLVALSDCADGGDFNPDL--VNSIFRGAHSLKGLAGMFGFTDIA 70 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E +H MENLLD R G++ L+ + I++ E+ E L QS I QA+ Sbjct: 71 ELSHNMENLLDSLRLGKVSLSQNTISVLFES----MELLGTLVQSAGTADRQLHDISQAV 126 Query: 124 RQLALEA----KGETPSAVTRLSV---VAKSEPQDEQSR---SQSPRRIILSRLKAGEVD 173 +++ K E+ S + +L + V S + E+ R + R I S L + + Sbjct: 127 ARISSCVCAVQKEESVSPLAKLGLSERVLGSLTEYEEHRLLENVKKGRRIFSILASFSLA 186 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGD-------------IAEDDITAVLCFVIEADQ 220 +++LG LT DV+K A + + LP + ++A + +I+ D Sbjct: 187 TFDQDLGELT---DVLKSAGEVISTLPSAGGGLESSINFEILFGSEKVSAEVTALIDRDN 243 Query: 221 ITFETVE-VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG 279 IT + SP S P ++ E AP+ E T +S S ++RV + K+D+L+N+VG Sbjct: 244 ITVMLLGGESP--SQPAEMQ---EMAPSLAPEASMTAKSM-SRTVRVDISKLDELMNIVG 297 Query: 280 ELVITQSMLAQRSSELDPVNHG----DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 ELV++ S ++Q + + + +L + L+R +LQ+ VM IRM+P+ +F + Sbjct: 298 ELVLSHSTISQLAGRMRLDGYSAPSIELTKAAKGLERKLTELQKGVMEIRMIPVGQLFEK 357 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 R+VR ++ + GK+VEL + G+ TELDK +IE I DP+ H++RNS+DHGIE PEKR+ A Sbjct: 358 MARIVRKISREQGKKVELKMFGADTELDKLIIEDISDPMMHIIRNSIDHGIETPEKRILA 417 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLI 454 GK+ G + LS+ +G ++ I+V DDGAG++ E++ KA +GL S E + D E LI Sbjct: 418 GKDEKGVIKLSSYQKGNHVVIQVEDDGAGIDIEKVKRKALEKGLIPSIEAIHDKEALDLI 477 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F PGFST+++V+++SGRGVGMDVV+ NI + G V+++S G G+++ I LP+TLAI+ Sbjct: 478 FLPGFSTSDKVSEISGRGVGMDVVRTNIAALSGMVDVESYPGEGSSMIITLPITLAIIKA 537 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + + + LP+ +V+E++ D+ + E V+++R LP++ L K F Sbjct: 538 LIISSVGRTYALPITSVLETILVERKDVRTVEKKE-VIQLRENTLPLLRLGKFFETETQG 596 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 + VV++ + +R ++VD L+GQ +V+K++ ++ GIS A LGD L+ Sbjct: 597 EQQENFYVVVVGAAEKRLGMVVDDLLGQQDIVIKSIGETFKGFKGISGAADLGDQRTILV 656 Query: 635 VDVSAL 640 +DV + Sbjct: 657 LDVGGI 662 >UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSL2_SYNAS Length = 735 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 176/391 (45%), Positives = 257/391 (65%), Gaps = 4/391 (1%) Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 R++ + + ++IRV K+D LI++VGELVITQSM+ Q S + N DL ++ QL Sbjct: 340 RKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQENGNK-DLARNVSQLF 398 Query: 312 RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 R +LQ+ S+RM+P++ F R RL RD++ +GK V + + G TELD+++++ I Sbjct: 399 RITSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDRNMVDEIY 458 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 +PL H++RNS+DHG+E PE+R+ GK G + L A H+GGN IE++DDG GLNRE+IL Sbjct: 459 NPLVHMIRNSVDHGLETPEERVRCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNREKIL 518 Query: 432 AKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 KA L S E ++D E+ +IF PGFSTAE+VTDVSGRGVGMDVV++ I+K+ G +E Sbjct: 519 KKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRGVGMDVVRQTIEKLRGKIE 578 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP-READLHPLAGGE 549 I+S G GTT PLT+AI+DGM V+V E FILP A+ + L+P RE+ H + GE Sbjct: 579 IESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHNHIVGQGE 638 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 V V G +P+V ++ +F++ K + IV+++ R LLVDQ+IG+ +VV+K+ Sbjct: 639 TV-NVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVVIKS 697 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSAL 640 L + + GIS I+GDG + LI+D L Sbjct: 698 LGEGLKDIDGISGGAIMGDGQIGLIIDPEGL 728 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/99 (32%), Positives = 57/99 (57%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F E E + ++E ++L L+ + + +NAIFR HSIKG A ++E +H +E+ Sbjct: 158 FIAEGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRELSHNIES 217 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 LLD+AR GE + +I++ L+ D ++ + K++ E Sbjct: 218 LLDKARNGEHSVTPPLIDVVLDGADALKSMISRLKEALE 256 >UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobacteria RepID=Q3IDZ4_PSEHT Length = 725 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 244/730 (33%), Positives = 368/730 (50%), Gaps = 102/730 (13%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS ++ D Q F EA E+L + + L+ L+ D E LNAIFR H++KGGAG Sbjct: 1 MSFEVDEDILQDFLVEAGEILELLSEQLVELENNPEDTELLNAIFRGFHTVKGGAGFLAM 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 S L + H EN+ D R+ +N++++++ L+ D + E K ++P+ A + Sbjct: 61 SELVDACHGAENVFDLLRQKVRTVNSELMDVILQALDTINEMFATIKNREQPEPAD-PQL 119 Query: 120 CQALRQLAL-----EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + L +L L E G+T + V +P +P + +D Sbjct: 120 LEILHKLGLPPTEEELGGDTIAPVITQDANLDDDPFAFDELFDAPSAATNATANDAHIDE 179 Query: 175 LEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVL------------- 212 + E+ L D + G AI L GDI +D+ ++L Sbjct: 180 ISED--EFENLLDELHGKGKGPAIKESLSNSSDLSGDITDDEFDSLLDELHGVGSFGAVN 237 Query: 213 -----------CFVIEADQIT---FETV--EVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 D+I+ FE + E+ K + P + AA AP +V K Sbjct: 238 KTPKPQAAQSPAASTNDDEISDDEFEALLDELHGKGAAPKSKESAATPAPVNKVTAPKAA 297 Query: 257 RSNES-------------------------------------TSIRVAVEKVDQLINLVG 279 S T++RV +++DQ++N+VG Sbjct: 298 VVKSSPVAVDKVKQPQAAVVAASANTNTAAPVAKKAPPAQAETTVRVDTKRLDQIMNMVG 357 Query: 280 ELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 ELV+ ++ L SSE + ++ ++ L DLQ +VM RM P++ VF R+P Sbjct: 358 ELVLVRNRLVSLATSSESESMSK-----AISNLDVVTADLQGAVMKTRMQPIKKVFGRFP 412 Query: 338 RLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGK 397 R+VRDLA L K + L LVG T+LDK+L+E + DPL HLVRNS+DHGIE+P+ R AAGK Sbjct: 413 RVVRDLARTLNKDINLLLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPDDREAAGK 472 Query: 398 NSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLI 454 G + LSA QG +I + + DDGAG++ E++ A +G+ E +S+ E LI Sbjct: 473 PRTGTVTLSASQQGDHILLTIKDDGAGMDAEKLKQIAIKKGVLDQEQASRLSNTEAYNLI 532 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 FAPGFST E ++D+SGRGVGMDVVK I ++ G V I+S+ G GT + I +PLTLAIL Sbjct: 533 FAPGFSTKEAISDISGRGVGMDVVKTKITQLNGSVSIESELGVGTILEIKVPLTLAILPT 592 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHP--LAGGERVLEVRGEYLPI--VELWKVFNV 570 + V V+++ F LPL V E DL + G+ + VR + +P+ +E W V Sbjct: 593 LMVVVSEQTFALPLAGVSEIFN---LDLTKTNVVDGQLTIIVRKKAVPLFYLEHWLVKG- 648 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 A + QG VVI+Q G ++ +VD LIGQ +VV+K L++ + PG++ ATI DG Sbjct: 649 ADRTSRKAQGHVVIVQIGTQQVGFVVDSLIGQEEVVIKPLDALLQGTPGMAGATITSDGG 708 Query: 631 VALIVDVSAL 640 +ALI+DV ++ Sbjct: 709 IALILDVPSM 718 >UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter oxydans RepID=Q5FQQ3_GLUOX Length = 682 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 230/674 (34%), Positives = 367/674 (54%), Gaps = 69/674 (10%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 FFDE DE L +E+ L L+ E + E++N IFR HSIKGGA FG L +HL E+ Sbjct: 17 FFDECDEQLTLLEEELTALEDEPENGEKINTIFRCVHSIKGGAAAFGMEDLVRFSHLFES 76 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ----------------------SQ 109 +LD R GE+ +N + I +FL+ KD + + + +K + Sbjct: 77 VLDRFRSGELSVNAESIRVFLKCKDALSDIVSDFKNGGSTYEVAPEITADLEHYLGSDAS 136 Query: 110 EPDAASFDYICQALRQLAL---EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR 166 EP+ AS + + + ++ + + + PS + S+V P+ + R R I+++ Sbjct: 137 EPEPASEEVRTEDIFGMSFAPVKIEIDAPSE-QQFSIVLTVSPEFYE-RGDDIRNILMAL 194 Query: 167 LKAGEVDL------------LEEELGHLTT--LTDVVKGADSLSAILPGDIAEDDITAVL 212 G++ + + +LT L K +S+ I D DD+ AV+ Sbjct: 195 EGLGQIKVQVDSDAVPLLADISPGQSYLTWQILLTTEKSRESIDEIF--DWCGDDLQAVI 252 Query: 213 CFVIE-ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKV 271 V E A+Q + V+ + + PPV K T +S ++RV ++++ Sbjct: 253 TSVPEEAEQTKIPSAPVAEEKTDPPV---------------RKGTERKDSATVRVDIQRI 297 Query: 272 DQLINLVGELVITQSML-AQRSSELDPVNH--GDLITSMGQLQRNARDLQESVMSIRMMP 328 D+L++L+GELVI Q + +Q P + G ++T+ QL +LQE+V+++R P Sbjct: 298 DKLVDLIGELVINQGAIQSQMRRNKVPGDSFLGSVVTAQEQL---IHELQENVITMRAYP 354 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 ++ VF + R+VR+ A KQV L L G TE+D+S++E++ DPLTH+VRN++DHGIE Sbjct: 355 IKTVFQKLGRVVRETARLTEKQVRLVLEGEDTEVDRSILEKLSDPLTHMVRNAIDHGIES 414 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSD 447 PE R AGK+ G L L A + G I +E+ DDGAGL+ +RI KA + + + + Sbjct: 415 PEVRAQAGKDPEGLLRLRAFQRSGRIIVEIQDDGAGLDPDRIYEKAVEKKIIEKGQRLDR 474 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 +E+ LIF PGFST +VTDVSGRGVGMDVVK+++Q++ G + I S +G GT I LP Sbjct: 475 EEIYSLIFEPGFSTVAEVTDVSGRGVGMDVVKQSLQQINGRIFISSSKGKGTIFSISLPF 534 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TL++++G+ + + F++P+N V +++ + + G+ R YL ++ + Sbjct: 535 TLSVIEGIIFKSEGQDFVVPINNVSDTIIFDNSKAFHIGEGKYGYPYRDGYLSVIYASDL 594 Query: 568 FNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 +V K Q I ++++ + A +VD++I Q + VVKNLE NYRK+ S ATIL Sbjct: 595 LDVPSDK--KNQKICFVIENENEEKMAFIVDKIIDQSRFVVKNLEDNYRKIACFSTATIL 652 Query: 627 GDGSVALIVDVSAL 640 GDG+VA I+DV L Sbjct: 653 GDGNVAFILDVEFL 666 >UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC94_HELMI Length = 691 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 231/701 (32%), Positives = 360/701 (51%), Gaps = 70/701 (9%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F+ EA E L + + LL ++ + E ++ +FRAAH++KG + GF + E TH Sbjct: 4 YMDLFYSEAKEQLDILTRDLLAIESGSSSQEMIHEMFRAAHTLKGSSAMVGFPAVTEMTH 63 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQ------EQLDAYK-------------QS 108 +E+LL + R G+ L+ I+L + D +Q E +D+ K Q Sbjct: 64 KVEDLLGKVREGKHILSAKDIDLVFQALDYIQNCLFHPEAVDSAKTEELARKLADIQDQP 123 Query: 109 QEPDAASFDYICQALRQLA-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL 167 + + D + + QLA L ++G T + V + E R +IL+ L Sbjct: 124 APANGPADDSVAKRTAQLAELRSRGTYKGKATEILVTFRPECAMRSVRF----FLILNNL 179 Query: 168 K-----------AGEVDLLEEELGHLTTLTDVVKGA-DSLSAILPGDIAEDDITAVLCFV 215 K E++ E + L D +G+ + L L ++ V C Sbjct: 180 KEFGEVIGSVPAWSEMEANENAYEEASILLDWRQGSRNDLERAL-------NVADVRCIE 232 Query: 216 IEADQITFETVEVSPKISTPPVLKLAAE----------------QAPTGRVEREKTTRSN 259 I + E P L A E + P + + + Sbjct: 233 IRSGDDGNEAFSAVGAAEPPTALPAATEVTVAKAAAGYRGTEAVKTPAADLASQGDSSHR 292 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG------DLITSMGQLQRN 313 + I++ ++D L+NL+GE++I+Q+ + R E HG ++ QL R Sbjct: 293 PTEYIKIEANRLDLLMNLIGEMLISQARFS-RIQENYLERHGQTPLAVEMAEETHQLARI 351 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 LQ+ +M R++P+ VFSR+PR+VRDLA K GK+V L + G TELDK++++ I DP Sbjct: 352 TTQLQDGLMKARLVPIGGVFSRFPRIVRDLARKQGKKVNLMMEGQDTELDKTVVDLIGDP 411 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 + HL+RNS+DHGIELPE R AGK G + L A H+G I +E+ DDG G++ ++LAK Sbjct: 412 IMHLIRNSVDHGIELPEARRQAGKPEEGTIRLKATHEGSRIVVEIGDDGRGIDESKVLAK 471 Query: 434 AASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 + GL + S E+ LIFAPGFSTAE+VTD+SGRGVGMDVVKR I + G ++IQ Sbjct: 472 GRALGLIPEGQTPSRQEILDLIFAPGFSTAEKVTDISGRGVGMDVVKRAISSLHGIIDIQ 531 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT ++ LP+TLAI+ G+ VRV E I+PL+ V+ES Q + ++ + GG V Sbjct: 532 SEPGQGTAFQLQLPITLAIIQGLIVRVERESLIIPLDNVLESFQLQNKEVQSV-GGREVF 590 Query: 553 EVRGEYLPIVELWKVFNVA--GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 VRG +P+ L + + K VV++ RR L VD LIG+ ++V+K + Sbjct: 591 SVRGRIVPLYRLQDLLQIPLDPEKGRRKYRSVVMVGLAERRMGLEVDSLIGKKEIVIKPI 650 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 ++ + + + ATILGDG V+LI+++ A+ +R+ N Sbjct: 651 KAPWLNLEHFAGATILGDGRVSLILNIGAIFRRGAGERLQN 691 >UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 Tax=Moorella group RepID=Q2RKH9_MOOTA Length = 685 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 239/682 (35%), Positives = 368/682 (53%), Gaps = 58/682 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +D+S + F DEA+E L +++ ++ L+ D E LN IFRAAH++KG + + GF+ L Sbjct: 4 LDMSQYLGIFLDEAEEQLQQLDEAVVQLEQTPDDQELLNTIFRAAHTLKGSSASMGFNRL 63 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH ME++LD R+G++ ++ +II++ L + D ++ D+ + + + + + Sbjct: 64 ATLTHRMESVLDSLRQGKLAVSREIIDILLASVDTLRALKDSIAAGKGEEGDVNEVVAR- 122 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE---- 178 LEA P+A VA +E + R + +A E+ + E Sbjct: 123 -----LEAVLAGPAAPVANKAVANAELTLDDIEQNVIRAAEVKGFRAYEIRVQLEAGCQM 177 Query: 179 --------LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV---- 226 +L L +++K + + + D T L FV D T V Sbjct: 178 KSARAYLVFNNLKELGEIIKSVPHTQDL---EAEKFDDTFTLAFVSREDADTLANVVKSV 234 Query: 227 -EVSPKISTPPVL---KLAAEQAPT--GRVEREKTTRSNEST----------SIRVAVEK 270 E+ + P VL + AA +A T G+ E N +T ++RV V++ Sbjct: 235 SEIKDVLVRPIVLEEDQPAAARAGTAPGKPGVEAAGGKNGTTAPAGEHHVNQTVRVDVQR 294 Query: 271 VDQLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDLQESVMSIR 325 ++ L+NLVGELVI ++ L + + L L + R DLQE +M R Sbjct: 295 LENLMNLVGELVIDRTRLTEVGNGLKNRLGNEELLETLEEVSLHIGRITSDLQEEIMKAR 354 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 M P++ VF+R+PR+VRDLA K GK+++ + G TELD+++IE I DPL HL+RN++DHG Sbjct: 355 MFPIDQVFNRFPRMVRDLARKAGKEIDFIIEGRETELDRTVIEEIGDPLIHLLRNAIDHG 414 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN- 444 IE PE RL GK G + L A HQ I I V DDGAG++ E+I AKA ++GL E+ Sbjct: 415 IEEPEVRLRQGKPRHGTVRLKAFHQENQIVITVEDDGAGMDAEKIKAKAIARGLISPESA 474 Query: 445 --MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 +S E LIF PG ST+++VTDVSGRGVGMD+V+ +I+K+ G ++I++ G GT Sbjct: 475 ARLSRREALDLIFLPGLSTSDKVTDVSGRGVGMDIVRNHIEKINGTIDIRTTPGKGTCFT 534 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP----LAGGERVLEVRGEY 558 I LPLTLAI + V V V+ PL V+E + D+ P ++V+ VRG Sbjct: 535 IKLPLTLAINRSLLVHVDGRVYAFPLANVVEII-----DVTPDSIQHVHRQQVVVVRGRV 589 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP++ L + + A VVI+ ++ +VD LIG+ ++V+K+L + K+P Sbjct: 590 LPLIYLGQALGLGTPIPAADTYAVVIVGLAEKQVGFIVDDLIGEQEIVIKSLGNFIGKIP 649 Query: 619 GISAATILGDGSVALIVDVSAL 640 GI+ ATI+GDGSVALI+DV +L Sbjct: 650 GIAGATIMGDGSVALILDVRSL 671 >UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 Tax=Proteobacteria RepID=A5G5U7_GEOUR Length = 712 Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust. Identities = 181/399 (45%), Positives = 268/399 (67%), Gaps = 8/399 (2%) Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 EQ V +E+ ++ S SIRV EK+D L+NLVGELV Q+ L+Q S+ + Sbjct: 307 EQQHVKEVRQERQSQETAS-SIRVPAEKLDILVNLVGELVTVQARLSQTSAGR---RDAE 362 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L++ +++R +L+++ ++IRM+P+ FS++ RLVRDL+ +LGK+VE+ G+ TEL Sbjct: 363 LMSIAEEVERLTAELRDNALNIRMLPIGSTFSKFKRLVRDLSNELGKKVEMETAGAETEL 422 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK++IE++ DPL HL+RNS+DHGIELP+ R AAGK G + L+A H G ++ I + DDG Sbjct: 423 DKTVIEKLNDPLVHLIRNSIDHGIELPDVREAAGKPGQGTVHLAAVHSGDSVLITIRDDG 482 Query: 423 AGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AGL++E I KA +GL + ++S+ E+ LIFAPGFSTA++V+ VSGRGVGMDVVKR Sbjct: 483 AGLDKEAIRTKAIEKGLIPAAADLSEKEIFNLIFAPGFSTAKKVSSVSGRGVGMDVVKRA 542 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I + G ++I SK G GTTI + +PLTLAI++ + VR+ + F+LPL+ V E ++ AD Sbjct: 543 IDALRGSIDITSKHGDGTTITVKIPLTLAIIESLLVRIGADRFLLPLSLVDECVELTRAD 602 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + A G + VR +P + L + F++ G + Q +VI + G R ++VD +IG Sbjct: 603 VEK-AHGRNLATVRDHMVPYIPLRERFDIKGETPDIEQ--IVITKVDGMRVGVVVDHVIG 659 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +HQ V+K+L Y+ V IS ATILGDG+VALI+D+ L Sbjct: 660 EHQTVIKSLGRAYKNVDAISGATILGDGAVALIIDIPQL 698 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%) Query: 35 PDAEQL-NAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLE 93 PD E+L +FRA H+IKG FGF + TH +E + D R G++ + +IN+ L Sbjct: 31 PDDEELIGRVFRAMHTIKGSGAMFGFDDIAAFTHQVETVFDLVRNGKVSVTKKLINVTLA 90 Query: 94 TKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSA 137 +D ++ LDA + DA + I L+ L + K P A Sbjct: 91 ARDQIKAMLDASTGGEPVDAGVAEEIIAELKSLLSDTKALAPLA 134 >UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Tax=Acidobacteria RepID=Q01VJ7_SOLUE Length = 676 Score = 330 bits (847), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 166/383 (43%), Positives = 250/383 (65%), Gaps = 2/383 (0%) Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 T E+ +++V K+D L+++ GE+VI +S L + EL + + L + + R Sbjct: 282 TGRRETMAVKVDTAKLDYLVDMAGEMVIAES-LVRHDQELSAIKNPLLHRKIAHMTRITA 340 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +LQ++ M++R++PM +F R RLVRDL+ + GKQVE+ G ELD++++E + DPL Sbjct: 341 ELQKTAMAMRLVPMGPLFRRMARLVRDLSRQFGKQVEMETQGDDIELDRTIVEELSDPLM 400 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 H+VRN+LDHG+E P +R GK + L+L A+HQ G + IE+TDDG GL+R +IL +A Sbjct: 401 HMVRNALDHGVEFPSEREKTGKPATARLLLKAQHQAGQVVIEITDDGRGLDRSKILDRAV 460 Query: 436 SQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +GL S+ ++D+EV LIF PGF+TA QVT+VSGRGVGMDVV+R+I+K+ G +EI+S Sbjct: 461 QKGLVRASDTLTDNEVFNLIFEPGFTTAAQVTNVSGRGVGMDVVRRHIEKLRGRIEIRSS 520 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G G T + LPLTLAI+DG+ V V E +I+PL AV E +P + + + V Sbjct: 521 LGRGATFLLKLPLTLAIIDGLVVTVGGERYIVPLFAVREMFRPTAETIWTVQQRAEMALV 580 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RG LP+V L++ F V + QG++V+ G+++ +LVD LIG+ +VV+K L + Sbjct: 581 RGTLLPVVRLYRAFGVTPRSEDPCQGVLVVADVEGQQFCILVDDLIGKQEVVIKTLGDTF 640 Query: 615 RKVPGISAATILGDGSVALIVDV 637 + V GI+ ILGDG V LI+D+ Sbjct: 641 KNVSGIAGGAILGDGRVGLILDL 663 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 32/219 (14%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F E+ E LA++E +L L+ E ++E LNA+FR H+IKG AG +Q+ H +E Sbjct: 105 FIVESREHLANVETQVLTLEREPTNSESLNAVFRGFHTIKGLAGFLELWEIQKLAHEVET 164 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ-----------------------S 108 +LD AR + + + I++ LE+ D ++ L + S Sbjct: 165 VLDRARNSQWTITGNAIDVILESADYLRRWLAHLESVLQHRASDPPQRDEALLSRIVLLS 224 Query: 109 QEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSP--------- 159 EPDA + A+ ++ A GE PS + A + S +P Sbjct: 225 SEPDAGAPGLDALAMAVTSIPAPGEVPSLIAEPPAAALQPAPPVPAESSAPTPPPNQTGR 284 Query: 160 RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI 198 R + ++ ++D L + G + +V+ LSAI Sbjct: 285 RETMAVKVDTAKLDYLVDMAGEMVIAESLVRHDQELSAI 323 >UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJE6_DESAA Length = 778 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 175/410 (42%), Positives = 267/410 (65%), Gaps = 7/410 (1%) Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 ++P + ++ P + R + IRV + K+D LINLVGELVI ++M+ R+ Sbjct: 364 ASPKAVPAKPKEMPATKAAPRTIVRQD----IRVDLAKLDHLINLVGELVIAETMVT-RN 418 Query: 293 SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 +L + + S L + RDLQ+ +S+RM+P+ VF + RLV DL+ K GK++ Sbjct: 419 PDLVGHDFENFEKSAMHLSKIVRDLQDISLSVRMIPIAGVFRKMIRLVHDLSAKAGKKIN 478 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 LTLVG TE+DK++ E I DPL HLVRNS+DHG+E P++R AAGK+ G ++L A H+GG Sbjct: 479 LTLVGEDTEIDKTVGEIIADPLVHLVRNSIDHGLEPPDERKAAGKDETGEILLQAGHEGG 538 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSG 470 + + + DDG GL+RE IL+KA +GL + ++SD +V +IF PGFSTA+QVTD+SG Sbjct: 539 EVWVLIRDDGRGLSRENILSKAIERGLVNGDGSDLSDSDVYNMIFHPGFSTAKQVTDISG 598 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVK+NI+++ GH+++++ G G TI + LPLT+AI++G+ VRV + +PL A Sbjct: 599 RGVGMDVVKKNIERIKGHIDVRNNPGHGCTIVLRLPLTMAIIEGLLVRVGKAKYTVPLLA 658 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 V E++Q + + G+ ++ VRG+ LPI + ++ N + G++VI+++ G Sbjct: 659 VRENIQVTKEMITKTMDGQELVMVRGQLLPIYRVHELHNTRPDNYKLEDGLLVIVENRGE 718 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L VD+++G Q V+K L + V G+S TILGDG V+LI+DV+ L Sbjct: 719 MACLFVDEILGDQQAVIKGLSNYIGSVRGVSGCTILGDGEVSLILDVAGL 768 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F EADELL E LL ++ + E ++ FRA HS KG G G S + +H MEN Sbjct: 195 FVTEADELLEQCEAMLLTMEDDTT-GEPVHEAFRAMHSFKGNCGFMGLSDPERMSHRMEN 253 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQE 100 +L + G + +D + L+ DI+++ Sbjct: 254 VLSGVKEGIIAPTSDNTGILLKLVDILRD 282 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 5/96 (5%) Query: 12 FFDEADELLADMEQHLLVLQ-----PEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 F ++ ELL D E L+ LQ P+ + E +N+IFR HS+KG AG + T Sbjct: 10 FVLDSLELLDDAEPKLIELQASSQVPDQVNTESINSIFRLFHSMKGSAGMLELHNITSLT 69 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 H E LLD R G+ Q+ ++ + D+++E L Sbjct: 70 HEAETLLDMFRSGKTQMTRAHMDTLFKAMDLIREIL 105 >UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTS1_DESHD Length = 729 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 186/392 (47%), Positives = 265/392 (67%), Gaps = 7/392 (1%) Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-LITSMGQ---- 309 T +N+ +IRV ++D LINLVGE+VIT++ L Q EL D L+ ++ + Sbjct: 329 TDGNNQVHTIRVDTVRMDNLINLVGEMVITRTRLVQIGHELKEQYRMDALVNNLNETTVY 388 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 L R DLQES M +RM+P+ VFSR+PRLVRDLA K K++EL L G TELDK+++E Sbjct: 389 LGRLMSDLQESAMRLRMVPIGTVFSRFPRLVRDLARKTQKEMELVLRGEDTELDKTVVEV 448 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 I DPL HL+RNS+DHGIE PE+R AAGK +G + L A H+G +I I ++DDG GL+ R Sbjct: 449 IGDPLMHLIRNSVDHGIETPEERRAAGKPELGTITLDAYHEGNHIAILISDDGKGLDLNR 508 Query: 430 ILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 I KA S+GL E +S+ ++A LIF PGFSTA++VTD+SGRGVGMDVVK+ + +GG Sbjct: 509 IYEKALSRGLVGEREGLSERDIANLIFLPGFSTADKVTDISGRGVGMDVVKKALNNLGGM 568 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 ++I ++QG GTT I LPLTLAI+ + V V+ E++ +PL++V+E+L D+ + GG Sbjct: 569 IDITTRQGQGTTFTIRLPLTLAIIQALLVEVSTEIYAVPLSSVLETLLVERKDIKNV-GG 627 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 ++++RG LP++ L F + + EA + VV++ G + L+VD L GQ +VV+K Sbjct: 628 LPMVQLRGNTLPLISLRDKFELPAPEAEAEEVFVVVVGLGDKALGLIVDGLRGQQEVVIK 687 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +L +PGI+ ATILGDG V LI+D+ +L Sbjct: 688 SLGDFLNNLPGIAGATILGDGKVTLILDIGSL 719 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/138 (29%), Positives = 77/138 (55%), Gaps = 4/138 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + +D+ +F + ++ E + + LL L+ E + +N +FR+AHS+KG +GT GF+ Sbjct: 9 LGVDLGEFLDFYLLDSQEQIEKLAAGLLQLEKEGNNVGLINDLFRSAHSLKGASGTMGFT 68 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH E+LLD R+G+M+++ ++++ L D ++E L ++ E A + + Sbjct: 69 SIVALTHSAEDLLDRLRQGKMEVSLPMVDVLLAVTDRVKEMLSQVEKRVEI-TAEYQDLV 127 Query: 121 QALRQLALEAKGETPSAV 138 +R L GETP+ V Sbjct: 128 DEMRAL---MNGETPAPV 142 >UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWD3_LEPCP Length = 750 Score = 328 bits (842), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 184/398 (46%), Positives = 264/398 (66%), Gaps = 17/398 (4%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVNHGDLITSMGQL 310 K R +++ +RV+ +K+D LI+L+GELVI S ++AQR E P + + L Sbjct: 343 KDRRGDDTRFLRVSADKLDHLIDLIGELVIAGSGAELVAQR--EQSPAFM-EAALRIHDL 399 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 + ARD + +RM+P+ F+R+ R+VRD++ LGK VEL + G TE+DKS++E I Sbjct: 400 VQEARD---GALGLRMVPIGETFARFQRVVRDVSKALGKDVELEITGGDTEMDKSMVEAI 456 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPL HLVRNSLDHGIE ++R A+GKN G L L+A H+ G I IEV+DDG GL RERI Sbjct: 457 ADPLMHLVRNSLDHGIEGGDERAASGKNPRGKLALNAYHESGQIVIEVSDDGRGLARERI 516 Query: 431 LAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 LAKA +GL + ++D EV +LIFAPGFSTAE+VTD+SGRGVGMDVVKRNI + GH+ Sbjct: 517 LAKAIERGLIDGDTVLTDAEVNLLIFAPGFSTAEKVTDISGRGVGMDVVKRNIDALRGHI 576 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG- 548 +I S G GTT++I LPLTLAI+DG + D +++PL V+E ++ A +GG Sbjct: 577 QIASTVGRGTTMQIRLPLTLAIIDGFLTSIGDVHYVVPLEGVVECIETPPACRAGASGGV 636 Query: 549 ----ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 ++RGE LP V+L F + A A Q ++++ ++ + LLVD+L+G+HQ Sbjct: 637 GPRLSGCFDLRGEVLPYVDLRTCFQLRSAPP-ARQSMLLV-RTATSKVGLLVDRLLGEHQ 694 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V+K L ++++PGI+ +TILG G VAL++D+ +L + Sbjct: 695 TVLKPLGRVFQQLPGIAGSTILGSGEVALVLDIPSLMS 732 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 39/97 (40%), Positives = 57/97 (58%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F +EAD+LL E+ LL L+ + D E LNA FRAAH+IKG AG FG + TH + Sbjct: 12 EGFLEEADQLLQQFEESLLGLESDPQDFELLNAAFRAAHTIKGTAGLFGCDAVVGFTHEV 71 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 E L++ R GE+ ++ I L+ +D M L+ + Sbjct: 72 ETLMEALRSGELAVSEAIFAALLQARDQMGRLLEEVR 108 >UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7Z2_UNCMA Length = 653 Score = 328 bits (840), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 206/663 (31%), Positives = 367/663 (55%), Gaps = 32/663 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S + F EA E L ++ LL L+ DA+ + IFR+AH++KG + + GF ++ Sbjct: 1 MSAYRDMFVSEAREHLQNLNSSLLALEKCPTDADVIQEIFRSAHTLKGMSASMGFKEMET 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-----------EPDA 113 H ENL D R G++ +T ++ + ++ D ++ +DA + + E ++ Sbjct: 61 LCHRTENLFDRIRNGQLVADTRVVTVLFKSLDTLEAMVDAIEAGESGSLDVAALVKEIES 120 Query: 114 ASFDYICQALRQLALEAKGETPSAVTRLS-----VVAKSEPQDEQSRSQSPRRIILSRLK 168 + C Q ++A PS + V + + P + S+ ++++ K Sbjct: 121 MDVNSACSG-PQPQVQAHEAQPSGAAHAAADTPEVQSMAIPAGAAAGSKE-FEVVVTVEK 178 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 + E + L + L+++ K A ++ I DI ++ ++++D+ E + Sbjct: 179 SCEFKGIRAFL-VIQQLSEIGKVASTVPDI--KDIEDERFGQEFTVLLQSDRTAGEIEKK 235 Query: 229 S---PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQ 285 + +I V ++ ++A G + S+R+ ++++D ++NLVGELVI++ Sbjct: 236 ARNVAEIGAAKVTEIVRKEAAGGPARPAGKEGTKVIHSVRIDIDRLDIIMNLVGELVISR 295 Query: 286 SMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAG 345 L + + +L ++G + R+ DLQ VM IRM+P+++VF+R+PR+VRD++ Sbjct: 296 GRLFEICGKQ---GIHELNETLGMVDRSITDLQNEVMRIRMLPVDHVFNRFPRIVRDISK 352 Query: 346 KLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLIL 405 K GK++E T+ G TELD+++++ I DPL HL+RN++DHGIE PE R+A GK + G + L Sbjct: 353 KEGKEIEFTIEGQDTELDRTVLDEISDPLNHLIRNAVDHGIEKPEDRIAQGKPATGQIQL 412 Query: 406 SAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTA 462 A + N+ IE+ DDG G++ +R+ KA +GL ++ MS++E MLIF PG STA Sbjct: 413 IARRERSNVIIEIIDDGKGIDVDRVKRKAIDKGLITQAQADAMSEEEGVMLIFKPGLSTA 472 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 ++VT+VSGRGVGMD+VK I+ +GG V+I++ G GT + LP T+AI+ + V V E Sbjct: 473 DRVTEVSGRGVGMDIVKTKIESLGGTVKIETHLGKGTKTILKLPPTIAIVQALLVNVGAE 532 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 + + + V+E+ ++ D+ + G E V+ +R LP+ L+K F+V + + Sbjct: 533 KYAISITNVVETEYVKDKDIKTINGNE-VIVIRDTILPLYRLYKFFDVE-VDSSLKRHTA 590 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V+++ G + ALLVD + Q ++ VK L + V G+ TI+G+G V I+DV+ + Sbjct: 591 VVVEKGEEKVALLVDSIESQQEIFVKPLGGLLQNVKGLEGVTIMGNGRVVPILDVATITE 650 Query: 643 INR 645 + + Sbjct: 651 VKK 653 >UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Tax=Geobacter RepID=C6E9E2_GEOSM Length = 604 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 171/392 (43%), Positives = 261/392 (66%), Gaps = 15/392 (3%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE----LDPVNHGDLITSMGQLQRN-- 313 +++++RV V+++D L+N VGELV+ ++ + Q S+ LDP GD G+L + Sbjct: 211 DNSTVRVDVKRLDDLMNQVGELVLERNRMIQLHSDYQTGLDPTGFGD---DFGKLSKRLN 267 Query: 314 --ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L ++G TELD+S+++ I Sbjct: 268 FVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDLVIIGEETELDRSVVDEIG 327 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 DPL HL+RN+LDHG+E P++RLAAGK+ G ++LSA H+G I I + DDG G++ ERI Sbjct: 328 DPLIHLIRNALDHGLETPDQRLAAGKDRTGTVVLSAAHEGNQIVISIKDDGRGIDPERIS 387 Query: 432 AKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 KA +GL E +M + E+ L+F PGFST EQ TD+SGRGVGMDVV+ NI+K+ G Sbjct: 388 KKALEKGLVTDEQLASMGNREILDLLFLPGFSTKEQTTDLSGRGVGMDVVRTNIRKLNGI 447 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 +EI++ G GT + LPLTLAI+ + V V EV+ +PL +V+E+++ +++ H + GG Sbjct: 448 IEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKEVYSIPLASVIETMRVSKSEFH-MIGG 506 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 + VL++R LP++ L + F+ T+ VVI+ +R L+V +L+GQ +V +K Sbjct: 507 QEVLKLRDSVLPLLRLQQTFSCQEYYTDRDTCYVVIVGVAEKRIGLIVTRLLGQQEVAIK 566 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +L +PGI +TI+GDG VALIVD L Sbjct: 567 SLGKFLANLPGIGGSTIMGDGRVALIVDPMGL 598 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 62/101 (61%), Gaps = 2/101 (1%) Query: 1 MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M++D D + F E ELL ++ L+ L+ DAE +N IFR+ H++KG + G Sbjct: 1 MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 F +L + TH E++L+ R+GE+ LN +I+++ LE D+++ Sbjct: 61 FDMLVKVTHKTEDVLNRLRKGELFLNPEIMDVILEAVDLVK 101 >UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 Tax=Clostridium thermocellum RepID=A3DDL6_CLOTH Length = 715 Score = 326 bits (836), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 167/390 (42%), Positives = 255/390 (65%), Gaps = 3/390 (0%) Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + T S++ + I V + K+D+L++LVGE+VI+++M+ Q + +L+ + + + QL + Sbjct: 325 DNTASSSKQSVISVNIAKLDKLMDLVGEIVISEAMVTQ-NPDLEGLQLDNFHKAARQLNK 383 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +LQ+ VMSIRM+P+ F + R+VRD+ KL K +EL ++G TE+DK++IERI D Sbjct: 384 LTNELQDVVMSIRMVPLSMTFQKMNRIVRDMGKKLNKSIELEIIGEETEVDKNIIERISD 443 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RN++DHG+E P++R+A GK G + L A++ GG++ I V DDG GL+RE+IL Sbjct: 444 PLIHLIRNAVDHGLEDPDERVAKGKPPAGKITLEAKNAGGDVWIFVKDDGRGLDREKILK 503 Query: 433 KAASQGLTVS-EN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 KA GL EN ++D E+ IF PGFST E VT+ SGRGVGMD+V NI +GG + Sbjct: 504 KAREAGLIHKPENELTDKEIYSFIFTPGFSTKENVTEFSGRGVGMDIVSNNISMVGGTIF 563 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 + S GTTI I LPLTLAI++GMS++V + +P ++ ES + + + + G Sbjct: 564 VDSVPDNGTTISIKLPLTLAIINGMSIKVGKSRYTIPTISIKESFKVKNEAVITDSEGNE 623 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 ++ VRGE P++ L K + + T GI+V+++S R + D+L+G+ QVVVK L Sbjct: 624 MIMVRGEVYPVLRLHKFYKINTEVTNINDGIIVMVESDSRVICIFADELLGEQQVVVKAL 683 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSAL 640 +KV GI T+LGDGS++LI+DV+ L Sbjct: 684 PKYIKKVKGIGGCTLLGDGSISLILDVAGL 713 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F E +LL +EQ L+ + E+ ++ IFR H+IKG A F + + H +E+ Sbjct: 14 FIFETLQLLDQLEQSLINSEKESGFESSIDEIFRIMHTIKGSAAMMLFDDISKLAHSIED 73 Query: 72 LLDEAR--RGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L R + E +T+II++ L D ++ + + QEPD + D I Sbjct: 74 LFFYLREEKPENVNSTEIIDIVLNGVDFIKNETVKLENGQEPDGDASDLI 123 >UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 Tax=Deltaproteobacteria RepID=Q1JZU4_DESAC Length = 774 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 172/383 (44%), Positives = 252/383 (65%), Gaps = 11/383 (2%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSS----ELDPVNHGDLITSMGQLQRNARDLQE 319 IRV +EK+D LINL+GELVI ++ML EL+ N MG+L R+LQE Sbjct: 393 IRVDLEKLDNLINLIGELVIAENMLIHNPDLEGLELESFNKA--AQQMGKL---VRELQE 447 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 M IRM+P+ +F R RLV DL+ K GK+V+L L G STE+DK++IE I DPL H++R Sbjct: 448 MAMIIRMIPVSGLFRRMIRLVHDLSVKSGKKVDLKLSGESTEVDKTVIETITDPLVHILR 507 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHG+E P++R+AA K+ G + L+A H+ G + I + DDG GLN+E+ILAKA + GL Sbjct: 508 NSMDHGLEPPDERIAAEKDETGVIRLNACHEEGEVWITLEDDGRGLNKEKILAKAITNGL 567 Query: 440 TVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 + +++D E+ LIF PGFSTA+++TD+SGRGVGMDVVK+N++K+ G V++ S G Sbjct: 568 IEGDGSDLTDKEIYNLIFQPGFSTADKITDISGRGVGMDVVKQNLEKIKGKVDVDSIPGK 627 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT I++ +PLTLAI+DGM VRV I+P+ ++ E+ +P+ + E ++ VR Sbjct: 628 GTKIKLRIPLTLAIIDGMLVRVGTARCIVPILSIKEAFRPQPDAITVTPDNEELVRVREN 687 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 + P+V L ++ ++ I+++L+ GR L+VD+++GQ Q V+K L V Sbjct: 688 FFPVVRLHELLETTPEHSDLVDAILIVLEYQGRSICLMVDEIMGQQQTVIKGLSEYIGNV 747 Query: 618 PGISAATILGDGSVALIVDVSAL 640 G S TILG+G V+LI+DV L Sbjct: 748 RGCSGCTILGNGDVSLILDVGNL 770 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 40/127 (31%), Positives = 64/127 (50%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F EADELL EQ LL + E + + IFR+ HS KG +G FG+ L++ + Sbjct: 196 EMVERFVQEADELLETAEQSLLEWEKEPDSQDHVALIFRSIHSFKGNSGFFGYGTLEKLS 255 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +EN+LD + G + + L + D +++ L+A + D D + AL+ L Sbjct: 256 HQIENVLDVVKSGGSFATENPFEVLLNSVDALKDGLNALTEDGRDDIDEIDSLIDALKAL 315 Query: 127 ALEAKGE 133 GE Sbjct: 316 PSPRIGE 322 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 20/165 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D + Q F E+ +++ +E ++ L + D E +NA+FR HS+KG AG F+ Sbjct: 5 LSSDQIEIIQEFVQESQDMIEQLEPTIIELG-QTTDNETINAVFRLFHSMKGSAGFLEFN 63 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + H E+LLD R G+M L + + L E D +E L+ + Sbjct: 64 HITSVAHAAESLLDLVRSGKMSLQPEHVTLLCECCDFTKEALETVDEH------------ 111 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSE---PQDEQSRSQSPRRI 162 A+ +GE + TR S+ P DE+ +Q P+ + Sbjct: 112 --FTDEAMAKQGE--AMATRFHEAMDSDSAAPADEEPVTQEPQTV 152 >UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=10 Tax=Betaproteobacteria RepID=Q47I37_DECAR Length = 639 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 232/646 (35%), Positives = 341/646 (52%), Gaps = 43/646 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F EA +LL+D++ L+ L+ D LN IFR H++KGGAG + L Sbjct: 7 MEDLLQDFLQEAHDLLSDVDNKLVDLEKMPDDRGLLNDIFRGFHTVKGGAGFLNATELVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 HL ENL D R GE++L +++++ + ++E Q +P AA I A Sbjct: 67 LCHLTENLFDRLRNGELELTPELMDVIMAATKGVREMFGELGQMVQPQAADPSVI--AAL 124 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 Q AL GE +A V +EP E + S +P GE D L H Sbjct: 125 QGAL--TGEVHAAAPVAEPVPLAEPPQE-TVSSAP----------GEPDW---NLLHSAV 168 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 A I + A +I + + + + P ++P A Sbjct: 169 TGQAPAAAPQGELITKAEAASAEIAVMPATAVPSTDVA------QPAPASP--FGRRATD 220 Query: 245 APTGRVE--REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ-RSSELDPVNHG 301 P G+ R R+ E+T IRV ++DQ++NL GE+ +T++ L R+ L N Sbjct: 221 KPGGQPANARRVEERARENT-IRVDTSRLDQVLNLSGEIGLTKNRLTSLRADILAGKNDS 279 Query: 302 DLITSM----GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + + ++ QL DLQ SVM RM P+ +F +YPR+ RDLA +LGK VEL L G Sbjct: 280 ETLHALDQAVSQLDLLVSDLQNSVMKTRMQPIGRLFQKYPRIARDLARQLGKDVELVLAG 339 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TE+DK++IE + DPL HL+RN++DHG+E+P +R AGK + L A +G +I + Sbjct: 340 EETEVDKTMIEDLADPLIHLIRNAVDHGVEMPSERQMAGKPVKSLVRLEARQEGDHIVLI 399 Query: 418 VTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAM-LIFAPGFSTAEQVTDVSGRGVG 474 + DDG G++ ERI AKA +GL E N D+ ++ LIF PGFST Q++DVSGRGVG Sbjct: 400 IADDGKGMSAERIRAKAIEKGLVSEEEANTLDERQSLNLIFLPGFSTKAQISDVSGRGVG 459 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVK NIQK+ G +EI+S+ G G+ I LPLTLAIL + V + ++ F LPL+ V E Sbjct: 460 MDVVKTNIQKLNGSIEIRSEPGKGSVFIISLPLTLAILPVLLVLLGEQPFALPLSMVREI 519 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 L ++ + + GG+ L VRGE LP++ L ++ G + V +Q+ R + L Sbjct: 520 LPIEQSRIQEV-GGKETLVVRGEVLPVITLARLL---GWPQKNYPEYGVFMQTAERSFIL 575 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VD G+ V+K+LE K G++ T L +G + LI+D+ L Sbjct: 576 GVDSFAGRDDAVIKSLEDFRPK--GVAGVTTLSNGQIVLILDMKEL 619 >UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMJ8_DESAH Length = 736 Score = 326 bits (835), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 168/406 (41%), Positives = 262/406 (64%), Gaps = 7/406 (1%) Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 K+ A Q + +E+ + R ++V+ +K+D L++ GELVI QSML Q++ + Sbjct: 333 KVQANQVASALIEQNQP-RKKVDAQVKVSTQKLDDLVDYAGELVIAQSMLKQKT-----I 386 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 N L ++ QL + ++Q MS+RM+P++ F + RLVRDLA K GK+V L + G Sbjct: 387 NDPSLSQNVSQLGQIVTNMQNIAMSMRMIPIKATFMKMIRLVRDLAKKSGKEVNLNMAGE 446 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TE+D+++++ + +P+ H++RNS DHGIE RL GK S G +IL A H+GG+I IE+ Sbjct: 447 DTEIDRNVVDALYEPMVHMIRNSCDHGIESASDRLEKGKPSQGEIILRAYHRGGHILIEI 506 Query: 419 TDDGAGLNRERILAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDG GL+++ IL KA GL T +E ++D +V LI PGFSTA+ +TDVSGRGVGMDV Sbjct: 507 EDDGKGLDKKTILEKAKETGLITGNEQLTDAQVYDLILQPGFSTAKTITDVSGRGVGMDV 566 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK I+K G + I S++G GT I LPLTLAI+DGM VRV +E +++P A+ ++ +P Sbjct: 567 VKSGIEKFRGQLNIASEKGRGTKFTISLPLTLAIIDGMLVRVDEEKYVIPTIAIQKAFKP 626 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 + D + G +++ RG +P++ L ++++ + K G+VV+++S + AL +D Sbjct: 627 GKEDYFTIKGKGEMVKDRGSLIPMIRLNEIYDSSKHKKSVQDGLVVVVESKDEKRALFID 686 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +L+G+ + V+K+L SN +V GIS IL DG V LI+D+ + +I Sbjct: 687 ELLGKDEYVIKSLGSNLEEVNGISGGAILADGRVGLILDIHGIFSI 732 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/99 (34%), Positives = 54/99 (54%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D + F EA E L +E +L+ L+ + + E +N IFR H+IKG +G + Sbjct: 151 ISDDDMEILMDFVSEALENLDTIEVNLIDLEQDPSNMEIINDIFRPFHTIKGVSGFLSLT 210 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 + + H ENLLD AR GE +N ++ LE+ D ++ Sbjct: 211 KINKLAHATENLLDSARSGEFLINARATDVILESVDTLK 249 >UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Tax=Aquificales RepID=B4U6X8_HYDS0 Length = 687 Score = 325 bits (833), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 229/682 (33%), Positives = 370/682 (54%), Gaps = 54/682 (7%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + ++ F EA E L +E LL L+ + + E LN+ FR H+IKGGAG G + Sbjct: 5 EMREIFEEFLVEARENLEKLETDLLELEKDPTNQEILNSAFRVMHTIKGGAGFLGLDPIV 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYICQ 121 ET H E++L + R E ++ I +L L+ D ++E L+ + +E PD + Sbjct: 65 ETAHKAEDILGKLRNAEFIISPAINDLLLKAADKIKEYLEKAENQEELEPDNELLSQLED 124 Query: 122 ALRQLALEAKGET----PSAVTRLSVVAK---SEPQ----DEQSRSQSPRRIILSR---- 166 L+ + T + V+ SV +K ++PQ + + S P +L + Sbjct: 125 VLKNPDKYSDKYTTINKSATVSDQSVSSKEKEAKPQIGEKNFEESSDDPVSRLLKKYGFE 184 Query: 167 -LKAGEVDLLEEEL----------GHLTTLTDVVKGADSLSAILPG----DIAEDDI-TA 210 L ++ + EEL G + L ++ G S S +IA+D I T+ Sbjct: 185 HLIGKSIEEILEELVLMPPSERPEGLIQELDALINGTSSKSTAESSKKEEEIAKDKIATS 244 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 + F + + +VS I PP AA+ + +EK E +R+ V+K Sbjct: 245 MPRFTSQMEAQVDAGAQVSHGIVEPPKQAGAADTHSRTQPPKEK----EEEKVLRIDVQK 300 Query: 271 VDQLINLVGELVITQ-------SMLAQRSSELDPVNHG--DLITSMGQLQRNARDLQESV 321 ++ L+NLVGELV+ + S + Q +SE + G DL + + + R DLQ +V Sbjct: 301 IEVLMNLVGELVLDRNRLVKVVSTIMQSASENNEQIKGLDDLESVLSSIDRIVGDLQVAV 360 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M RM P++ +F ++PR+VRDLA L KQ+EL G TE+DKS++E++ +PL H++RNS Sbjct: 361 MKTRMQPVKRLFQKFPRVVRDLAKLLNKQIELVTEGEDTEMDKSVLEKLEEPLIHIIRNS 420 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE PE+R GK G + L A +QG I + + DDG G++ +++ KA +G+ Sbjct: 421 VDHGIESPEERELLGKPRNGIIKLKAYYQGDRIIMVIEDDGRGIDIDKVKRKALEKGIIS 480 Query: 442 S---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 E M++ EV LIF PGFSTA+QV++VSGRGVGMDVV + G ++I++++G G Sbjct: 481 QDRLEKMTEKEVLSLIFHPGFSTADQVSEVSGRGVGMDVVMTTVMNFRGTIDIETQKGKG 540 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 T + + PLT+ I+ + V + + F +P+ +V+E +Q A + ++ GE VL +R Sbjct: 541 TKVTMAFPLTVGIIRALMVSIGNRNFAIPIYSVLEIIQQENATITTVS-GEDVLILREST 599 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 +P+V L V + +K G V+I Q G +R + V++L G ++VVK L + +V Sbjct: 600 IPLVNLADVLGIRNSKI----GYVIISQLGNQRVSFTVEELYGDEEIVVKPLGKIFGEVE 655 Query: 619 GISAATILGDGSVALIVDVSAL 640 GIS ATI GDG+V LI+D++ + Sbjct: 656 GISGATITGDGNVVLILDLAGI 677 >UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae RepID=B7IHS6_THEAB Length = 680 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 167/379 (44%), Positives = 248/379 (65%), Gaps = 8/379 (2%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + ++RV +EK+D L+NL+GELVI +S + L N ++ S+ QL R DLQ Sbjct: 301 TQTVRVDIEKLDTLMNLMGELVIARSRIIDI---LKKYNIKEVDESLAQLSRITLDLQNI 357 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM +RM+P+ YVF+R+PR+VRD++ LGK++ + G TELD++ +E I DPL HL+RN Sbjct: 358 VMKVRMVPISYVFNRFPRMVRDISKNLGKEINFVMKGEDTELDRTFVEEIGDPLVHLIRN 417 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL- 439 +LDHGIE E+R+A GK VG LILSA H+G N+ IEV DDG GL+RE+IL KA +GL Sbjct: 418 ALDHGIETKEERIAKGKPPVGTLILSARHEGNNVVIEVEDDGRGLDREKILKKAIERGLV 477 Query: 440 --TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 + + D++V +F PGFST EQV+++SGRGVGMDVVK ++ + G V I+SK+G Sbjct: 478 DEVKASGLPDEKVYEFLFMPGFSTKEQVSELSGRGVGMDVVKNTVESLNGTVHIESKKGL 537 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + V+V ++ +P++ + +L ++ + E +++ RGE Sbjct: 538 GTKVIIKLPLTLAIIQALLVKVDKYIYAIPISVIDSTLIVLPDEIQMVQNKEVIVK-RGE 596 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +PI++LW V + E + VV+++ R+Y + VD LIGQ +V+K+L + V Sbjct: 597 VIPIIKLWDVLGMK-HNEELDELNVVVVKVANRKYGIAVDTLIGQEDIVIKSLGKLFADV 655 Query: 618 PGISAATILGDGSVALIVD 636 S LGDGS+ALI+D Sbjct: 656 KEFSGGATLGDGSIALIID 674 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M ++ F DE E + + LL L+ D E +N FRA H++KG AGT GF + Sbjct: 1 MSYEEYLSVFIDEVREYVQQLNDALLDLEKNPEDMEYINVAFRALHTLKGMAGTMGFENM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD--AYKQSQEPD 112 + H MEN LD R G++ +++D ++ D++++ L+ A + S+E D Sbjct: 61 AKLCHRMENYLDAVRSGKVSIDSDKLDYLFNGLDLIEKMLEKIASEGSEEID 112 >UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=13 Tax=Proteobacteria RepID=Q47GY3_DECAR Length = 741 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 175/388 (45%), Positives = 259/388 (66%), Gaps = 17/388 (4%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVI---TQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 ++ E+ +RV +K+DQLI+LVGELVI + ++LAQ+S + GDL+ + L R Sbjct: 340 KAKEARLVRVQADKLDQLIDLVGELVIAGASANLLAQKSKQ------GDLVEATSVLSRL 393 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 ++++S + +RM+ + F+R+ R+VRD++ +LGK++EL + G+ TELDK+++E+I DP Sbjct: 394 VENIRDSALQLRMVQIGDTFTRFNRVVRDVSKELGKEIELVISGAETELDKTVVEKIGDP 453 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HLVRNSLDHGIE RL GK + G + L+A H G+I IE++DDG GLN+E+I AK Sbjct: 454 LMHLVRNSLDHGIEPTAVRLERGKPACGRVALNAFHDSGSIVIEISDDGGGLNKEKITAK 513 Query: 434 AASQG-LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +G + E +SD E+ LIF PGFST ++V+++SGRGVGMDVV+RNIQ + G V++ Sbjct: 514 ALERGVIQPGETLSDSEIVNLIFEPGFSTVDKVSNLSGRGVGMDVVRRNIQALRGAVDVA 573 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S G G T I LPLTLAI+DG V V +++PL+ V+E ++ L L Sbjct: 574 SVDGQGATFTIRLPLTLAIIDGFLVGVGKAAYVIPLDTVVECIE-----LKNQLTERNFL 628 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 +RGE LP + L ++F V G +V++Q GG+R ++VDQL+G+ Q V+K L + Sbjct: 629 NLRGEALPFIRLRELFEVPGEPPPRES--IVVVQFGGQRAGIVVDQLMGEFQTVIKPLGA 686 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 +R + GI +TILG G VALI+DV+AL Sbjct: 687 MFRHLRGIGGSTILGSGEVALILDVAAL 714 Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 5/134 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E LADME LL L+ D + +N IFRAAH+IKGG+G ++ Sbjct: 1 MDEITSVFIQESREQLADMEAGLLQLEQNPNDHDNINGIFRAAHTIKGGSGVIECHFIEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDA---ASFDYIC 120 TH +ENLLD R E+ ++ + L LE D M ++ +S+ PDA A D + Sbjct: 61 FTHRVENLLDALRNNELAVSPPLATLLLECCDHMVSLIEVLAAESEAPDAECQARGDALT 120 Query: 121 QALRQLALEAKGET 134 + L+ L+ KGET Sbjct: 121 ERLKHF-LDGKGET 133 >UniRef50_C4XQQ6 Chemotaxis protein CheA n=2 Tax=Desulfovibrio RepID=C4XQQ6_DESMR Length = 732 Score = 324 bits (830), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 180/418 (43%), Positives = 268/418 (64%), Gaps = 20/418 (4%) Query: 233 STPPVLKLAAEQAPTGRVER-EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 +T P A + AP+ + +T + + S+RV K+D L+NLVGELVI Q+ L Q Sbjct: 320 ATKPEAAAAPQTAPSAEAKAAPQTAKKDAMQSLRVDAGKLDDLVNLVGELVIAQARLTQL 379 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + L L + +++R + +L+++ + IRM+P+ FSR+ RLVRDL+ ++ K + Sbjct: 380 AGSL---GQPALTSVAEEIERLSNELRDNTLGIRMLPIGTTFSRFRRLVRDLSSEMRKSI 436 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 EL G TELDK++IE++ DPL HL+RNS+DHGIE P+ RLAAGK G +ILSAEH G Sbjct: 437 ELVTEGGETELDKTVIEQLNDPLVHLLRNSIDHGIESPQDRLAAGKPEAGTIILSAEHAG 496 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSG 470 G + + + DDG G+ ERI AKA +GL + ++D E LIF PGFSTA++VT +SG Sbjct: 497 GEVVLTIIDDGKGMQAERIRAKAVEKGLIPPDARLTDGECFNLIFLPGFSTADKVTSISG 556 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVKR++ + G +++QS+ G GT I I LPLTLAI+DG+ ++ ++ +I+PL+ Sbjct: 557 RGVGMDVVKRSMDALRGKIDVQSEPGKGTRITIRLPLTLAIIDGLQIKAGEDQYIIPLSL 616 Query: 531 VMESLQ-PREADLHPLAGGE-----RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 V E ++ R+ GG+ R +++RGE +P + L + F + G Q VV+ Sbjct: 617 VEECVELSRD-------GGDGTRRGRTIQLRGEIVPYIRLREAFEMEGLPPAIEQ--VVV 667 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 + G R + VDQ++GQ Q V+K+L + V GIS ATI GDG+++LI+DV +L A Sbjct: 668 TRFEGERAGIAVDQVLGQQQTVIKSLGNYIGSVSGISGATINGDGTMSLILDVPSLVA 725 Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +E E LA+++ LL L+ D + ++ IFRA H++KG FG + H +E+ Sbjct: 11 FQEEVAENLAELDGALLELEKNPRDHDLIDRIFRAVHTLKGACDMFGLVQVVALAHDLES 70 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 L D R G +++ ++++ KD L + +P+A + + Q L+ L Sbjct: 71 LFDHVRGGWRRVSKELLDAAFAAKDRFAAML---AEGADPEAEADPALAQRLKTL 122 >UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 Tax=Methanomicrobiales RepID=A3CU26_METMJ Length = 660 Score = 324 bits (830), Expect = 8e-87, Method: Compositional matrix adjust. Identities = 218/681 (32%), Positives = 359/681 (52%), Gaps = 66/681 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D + + F +E+ E ++ +LL L+ ++ IFR+AH++KG + + GF + Sbjct: 2 FDEEGYRKLFVEESRENHENIVNNLLALESGDDQHTAIDEIFRSAHTLKGMSASMGFDAM 61 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H ME++ R G ++ + +L L D ++ LDA + ++P + Q Sbjct: 62 EHLCHSMEDVFSLIRSGRREVTASLTDLLLTCTDAIEGMLDAIEAGEKPSDEQSTSLVQD 121 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQ-----------------DEQSRSQSPRRIIL- 164 L+ A E + ++ A P+ D S + R ++L Sbjct: 122 LQAFAEEEEEGGEQETPDMAASAGVPPEQAEEADGRPLYTLAVAVDPSSTMKDIRAMLLL 181 Query: 165 --------SRLKAGEVDLLEEEL--GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF 214 R +LLE+ G L + G D+L I G T + Sbjct: 182 QNLEEIGTVRSTTPSRELLEDGKFDGAFEILIESEAGVDALRTIASG-------TEISLL 234 Query: 215 VIEADQITFETVEVSPKISTPPVLK---LAAEQAPT------GRVERE-KTTRSNESTSI 264 + Q + V+P ++ PPV A EQAP+ +V+R K +S E +I Sbjct: 235 ALSTSQ----SPTVAP-LAIPPVASEEVRAPEQAPSEPQIPPPQVQRAVKAEKSREIKNI 289 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG--DLITSMGQLQRNARDLQESVM 322 RV ++++D+++NLV +LVI + L Q + + HG + ++ + R+ DLQ +M Sbjct: 290 RVDIQRLDRMMNLVEDLVINRGRLEQIAKK-----HGIKEFDEALSMVGRSVSDLQNLMM 344 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 IRMMP+E +F+R PR+VRD+A GK+VE ++ G TELD+S+++ + DPL H++RN++ Sbjct: 345 GIRMMPLERIFNRLPRVVRDVANHDGKEVEFSIEGGETELDRSMMDGLSDPLLHIIRNAV 404 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 +HGIE PE R A GK G+L L+A N+ I++ DDGAG++ ER+ K +GL + Sbjct: 405 NHGIETPEIREAGGKPPKGSLRLTARRDKDNVVIDIEDDGAGIDTERLRKKGVEKGLMTA 464 Query: 443 E---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E + + DE+ L+F PGFSTAE +TD+SGRGVG+DVVK+ I+ + G ++++++ G GT Sbjct: 465 EAAASATKDELVGLLFEPGFSTAETITDISGRGVGLDVVKKTIESLKGSIKVETEVGRGT 524 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 ++LP T+AI+D M V ++ +P++ V+E Q R +H + E +L +R + L Sbjct: 525 KFELVLPPTMAIIDVMMVHISGMRCAIPVSNVVEVAQTRPEAIHRIGNSEAIL-LRDQTL 583 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+ L +F A +V+LQ+ GRR ++VD + GQ +VVVK L G Sbjct: 584 PMHRLEDMFGRA-----EKSDTLVVLQNDGRRCCIVVDSVDGQQEVVVKPLSRIAGNCRG 638 Query: 620 ISAATILGDGSVALIVDVSAL 640 IS TI GDG V ++DV+ + Sbjct: 639 ISGITIPGDGDVVPVLDVNTM 659 >UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 Tax=Bacteria RepID=Q1IRH4_ACIBL Length = 766 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 224/663 (33%), Positives = 353/663 (53%), Gaps = 107/663 (16%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + + F E++E L +++ L+ L+ + + + L +IFRA H++KG +G GF ++ Sbjct: 17 EMDEIVKEFLVESNEGLDQLDRDLVALEKDPEEKDLLASIFRAIHTVKGTSGVLGFPKIE 76 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H+ E+LL R G+M+L+ I + L D+++E L + D Sbjct: 77 SVAHVGESLLSRLRDGKMRLDPQITSGLLAMGDVLRELL-----------GNIDA----- 120 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDE-----------QSRSQSPRRIILSRLKAGEV 172 L +E VTRLS + + + ++R ++ +R+ R KA Sbjct: 121 --LGVEGDRNVEPVVTRLSALLERTDSSKAADAATADTAPEARKKTTKRVAKKRSKA--- 175 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 A+ P +A E SP Sbjct: 176 ------------------------AVEPLSVA----------------------EASP-- 187 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTS---IRVAVEKVDQLINLVGELVITQSMLA 289 P LAA++A E + + S IRV V +D+++NLVGELV+ ++ + Sbjct: 188 --APASTLAADEAAQSGANLETSEARGPAVSANNIRVDVGLLDKMMNLVGELVLARNQIL 245 Query: 290 QRS-SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 Q + S+ D +++ +L +LQESVM RM P+ ++++ PRLVRDLA G Sbjct: 246 QYTGSQQDS----GFVSAAQRLNLITTELQESVMKTRMQPIGNIWNKLPRLVRDLALSCG 301 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 KQV + + G+ TELDK++IE I DPLTH+VRN++DHG+E+PE+R + GK + G L+L A Sbjct: 302 KQVRVEMDGAETELDKTIIEAIKDPLTHIVRNAVDHGLEMPEERRSTGKEAEGRLLLRAY 361 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQV 465 H+GG + IE++DDG G++ E + KA +GL +E MS+ E+ ++F PGFSTA+QV Sbjct: 362 HEGGQVNIEISDDGKGVDLEAVREKARQRGLVSAEQAARMSERELLNVLFLPGFSTAKQV 421 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 T++SGRGVGMDVVK NI+K+GG V++QS +G GT ++I +PLTLAI+ + E F Sbjct: 422 TNISGRGVGMDVVKTNIEKIGGTVDLQSVEGKGTALKIKIPLTLAIIPALIATSGGERFA 481 Query: 526 LPLNAVMESLQPREAD--------LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 +P +++E L E D +H G V +RG LP+V L V + K + Sbjct: 482 IPQVSLLE-LVRLEGDGVGKGIEYIH----GAPVYRLRGSLLPLVSLNGVLGLDRKKQQE 536 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 IVV LQ+ R + L+VD++ ++VVK L + + + + ATI+GDG+VALI+DV Sbjct: 537 IANIVV-LQADDRTFGLIVDEINDTEEIVVKPLSNLLKGLLCFAGATIMGDGTVALILDV 595 Query: 638 SAL 640 L Sbjct: 596 MGL 598 >UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Tax=Desulfuromonadales RepID=Q39QJ5_GEOMG Length = 607 Score = 323 bits (829), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 169/388 (43%), Positives = 258/388 (66%), Gaps = 8/388 (2%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN----AR 315 ++T++RV V+++D L+N VGELV+ ++ + Q +++ + G+L + Sbjct: 207 DNTTVRVDVKRLDDLMNQVGELVLERNRMMQLNTDFNDGGDDTFGEEFGKLSKRISFVTS 266 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L + G TELD+S+++ I DPL Sbjct: 267 ELQMQVLKMRMIPVEKVFKKFPRIVRNLARDLGKEVDLLVFGEETELDRSVVDEIGDPLI 326 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RN++DHG+E P++R+AAGK G LILSA H+G I I + DDG G++ ERI KA Sbjct: 327 HLIRNAMDHGLETPDERMAAGKPRKGTLILSAAHEGNQIVISIKDDGKGIDPERIARKAK 386 Query: 436 SQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +GL E M E+ LIF PGFST E+ TD+SGRGVGMDVV+ NI+K+ G ++I+ Sbjct: 387 EKGLVTDEQLAAMGQREILDLIFLPGFSTKEKATDLSGRGVGMDVVRTNIKKLNGIIDIR 446 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G G+ + LPLTLAI+ + V V DE + +PL AV+E+L+ E + H + GG+ VL Sbjct: 447 SELGQGSEFILKLPLTLAIIQSLLVEVEDETYSIPLAAVLETLRVEEREFHTI-GGQEVL 505 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 ++R LP++ L K+FNVA ++ VV++ +R L+V +L+GQ +V +K+L Sbjct: 506 KLRDSVLPLMRLQKIFNVAPSERSRVACYVVVVGVAEKRVGLVVSRLLGQQEVAIKSLGK 565 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 +PGI+ +TILGDG V LI+D + L Sbjct: 566 YLANLPGIAGSTILGDGRVTLIIDPAGL 593 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 56/88 (63%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F E ELL ++ L+ L+ DAE +N IFR+ H++KG + GF +L + TH E+ Sbjct: 14 FLTETAELLEKLDDDLVALEKTPSDAELMNGIFRSIHTVKGASSFLGFELLVKVTHKTED 73 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQ 99 +L+ RRGE+++ +++++ LE D+++ Sbjct: 74 VLNRMRRGELEVTPEVMDVILEAVDLVK 101 >UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae RepID=CHEA_THEMA Length = 671 Score = 322 bits (825), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 166/383 (43%), Positives = 255/383 (66%), Gaps = 8/383 (2%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 S ++RV +EK+D L++L+GELVI +S + + L N +L S+ L R DLQ Sbjct: 293 SQTVRVDIEKLDNLMDLMGELVIARSRILET---LKKYNIKELDESLSHLSRITLDLQNV 349 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM IRM+P+ +VF+R+PR+VRDLA K+ K+V + G TELD++ +E I +PL HL+RN Sbjct: 350 VMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRN 409 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL- 439 ++DHGIE E+R+A GK +G LILSA H+G N+ IEV DDG G+++E+I+ KA +GL Sbjct: 410 AIDHGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLI 469 Query: 440 --TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 + + +SD E+ +F PGFST E+V++VSGRGVGMDVVK ++ + G + I+S++ Sbjct: 470 DESKAATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDK 529 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + V+V + V+ +P+ + L + D+ + + V+ +RGE Sbjct: 530 GTKVTIRLPLTLAIIQALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRD-VIVIRGE 588 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +P+ LW+V + K E + VI++ G R+Y ++VD L+GQ +V+K+L + +V Sbjct: 589 VIPVYRLWEVLQIE-HKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEV 647 Query: 618 PGISAATILGDGSVALIVDVSAL 640 S A ILGDGS+ALI++VS + Sbjct: 648 KEFSGAAILGDGSIALIINVSGI 670 >UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW-like adaptor domain) n=5 Tax=Lactobacillales RepID=A8U609_9LACT Length = 687 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 226/690 (32%), Positives = 362/690 (52%), Gaps = 73/690 (10%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + FF+E DE L + + +L L+ D+ ++ +FR+AH+IKG A T G+ + + Sbjct: 5 SKYLDLFFEETDEHLQSLNEQVLELENNPEDSSIVDVMFRSAHTIKGMAATMGYDTMAKL 64 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD------AASFDYI 119 TH MEN+ D ++ + + I L + D + + ++ ++ + + D++ Sbjct: 65 THKMENVFDLLKQKIIPADATSIALIFDCLDTLSDLVEDLREENDAERDITNLVQRLDHV 124 Query: 120 CQALRQL--ALEAKGETPSAV---------TRLSVVAKSEPQ-----------DEQSRSQ 157 L A+ + ET S + + L ++ ++ DE+S + Sbjct: 125 SSGESALVEAVTVEQETGSLLNLSLEKVEDSDLMIIEAAKEDGYNAYVLAIRIDEESSMK 184 Query: 158 SPR-RIILSRLK---------AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDD 207 + R +++S+L+ G L ++ G + L V K + L D +E Sbjct: 185 NARVYLVMSKLEQHGDVLYSEPGTEALENDDFGTIFKLIYVSKLDEETVLNLALDNSE-- 242 Query: 208 ITAVLCFVIE-ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE----------REKTT 256 I VL I+ AD + + E K T P KL EQ VE + K Sbjct: 243 IAEVLIQTIQQADDLLVQQAE---KSQTEPQEKLVEEQEIVELVEATQATAKAPGKAKAQ 299 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL------DPVNHGDLITSMGQL 310 + SIRV + K+D +NLV ELVI ++ L S +L +P+ H + Sbjct: 300 NHAMNQSIRVDIGKLDSFMNLVSELVIYRTRLEDLSDQLLVSEMKEPLEH---------V 350 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 R + +LQE V+ IRM P+ V +R+PR++RDL LGK+ L + G TELD++++ + Sbjct: 351 ARISSELQELVLKIRMQPVSTVMTRFPRMIRDLGNDLGKEFNLVIEGEDTELDRTVVSEL 410 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 +PL HL+RNS DHG+E+PE+RL GKN G + ++A +G + + +TDDG G+N I Sbjct: 411 SEPLVHLLRNSADHGVEMPEERLRLGKNPKGLIKITAYQEGNRVVLTLTDDGKGVNPVVI 470 Query: 431 LAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 A A +G++ +E MSD E+ LIF PGFSTA++VT +SGRGVGMD VK+ I ++GG VE Sbjct: 471 KASAERKGIS-TEGMSDKEIQQLIFHPGFSTAQEVTSISGRGVGMDAVKQKITELGGTVE 529 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 ++S G GT +I LPLTL+I+ + V+V F +PL + ++ +E D+ + E Sbjct: 530 LESIVGKGTVFKINLPLTLSIIQSLLVKVGQATFAIPLGIIKTIVKVKEEDIIRVHNRE- 588 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 V + G +P+V L K +V A TE + +V+++ G AL VD L+ Q ++V+K L Sbjct: 589 VYKYEGLAVPVVRLHKALDV--AVTEESNLHLVLVKQGDNYNALAVDDLVRQQEIVIKKL 646 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSAL 640 + ATILGDGS+ LI+D SA+ Sbjct: 647 GQELNMLKNYLGATILGDGSIVLILDASAI 676 >UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1HQY1_LYSSC Length = 690 Score = 321 bits (823), Expect = 5e-86, Method: Compositional matrix adjust. Identities = 170/416 (40%), Positives = 275/416 (66%), Gaps = 10/416 (2%) Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 +P S P + + + A + E+ N++ IRV +E++D L+NL ELVI + L Sbjct: 279 TPDPSKPEPVAQSVKTAAPAKAEKNHAPVGNKT--IRVNIERLDILMNLFEELVIDRGRL 336 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 ++E VNHG+L ++ ++ R DLQ ++++RM+P+E VF+R+P+++R L+ L Sbjct: 337 QSIATE---VNHGELNETVERMSRVMGDLQTIILTMRMVPVETVFNRFPKMIRQLSRDLN 393 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K++ L ++G+ TELD+++I+ I DPL HL+RNS+DHGIE P R A GK G ++L A Sbjct: 394 KKINLEIIGAETELDRTVIDEIGDPLVHLIRNSVDHGIENPTSRRAKGKPEEGTVVLRAY 453 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQV 465 H G + IE+ DDGAG+NR+++LAKA S+G+ E +MSD+++ LI A GFSTA+ + Sbjct: 454 HSGNYVFIEIEDDGAGINRDKVLAKAISKGIVTQEQSYSMSDNQINELILASGFSTADVI 513 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 +DVSGRGVG+DVVK I+ +GG++ I+S Q G+ I LPLTL+I+ M V + E++ Sbjct: 514 SDVSGRGVGLDVVKTTIESLGGNISIESTQDVGSIFSIQLPLTLSIISVMLVEIEKEIYA 573 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVI 584 +PL++++E+ R +++ A ++V++ RG+ +P+V L ++F V + + + VVI Sbjct: 574 IPLSSIIETSIIRSSEIMN-AHNQKVIDFRGKVVPLVFLEEIFEVPRTEPQDEEFHSVVI 632 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++ G + L+VD IGQ ++V+K+L + + IS ATILG+G VALIVD +AL Sbjct: 633 VRKGEKLAGLVVDSFIGQQEIVLKSLGNYLTNIFAISGATILGNGKVALIVDCNAL 688 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 60/100 (60%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M+++ + + F +E+ E L +HLL L+ D + IFR+AH++KG + T GF L Sbjct: 1 MEVNQYLEMFIEESKEHLQACSEHLLALEKNPDDLAIVGEIFRSAHTLKGMSATMGFEDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 + TH MEN+LD R ++ + +I+++ E+ D ++E + Sbjct: 61 ADLTHKMENVLDAIRNEKIHVTPEILDVVFESVDHLEEMV 100 >UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=B8JCH1_ANAD2 Length = 661 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 237/643 (36%), Positives = 339/643 (52%), Gaps = 56/643 (8%) Query: 33 EAPD-AEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLF 91 +APD AE ++ FRA H+IKG FGF + TH +E + + R G + + ++I L Sbjct: 31 QAPDDAELVSRAFRALHTIKGSGAMFGFDEVAAFTHELETVFEHVRGGRLAVTRELIGLA 90 Query: 92 LETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQD 151 L KD+++ LD + D D + A R LA +A+ P+ A Sbjct: 91 LAGKDLVRGMLDGEGGA---DGRERDRLVAAYRALAPDAEAGAPTPAGGEQADAGCGAAG 147 Query: 152 EQSRSQSPR--RIILSRLKAGEVDLLEEE------LGHLTTLTDVV-----KGADSLSAI 198 + + + PR RI DL E L L+TL V G L + Sbjct: 148 DAAAALGPRTWRIAFEP----NPDLFENGTNPLGLLDELSTLGPCVVVARTDGIPRLEDL 203 Query: 199 LP------------GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 P D ED I V FV D+ T V+ P P A A Sbjct: 204 APERCHLAWEVTLTTDRGEDAIRDVFAFV--EDRCTLR-VQALPSAEAAPAAPSPALAAG 260 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLV---GELVITQSMLAQ-----RSSELDPV 298 G + R + + +L +LV GELV QS LA+ +EL V Sbjct: 261 AGEIARSTGGPARPPEAASSVRVAAAKLDHLVDLVGELVTAQSRLARLAAQAEDAELGAV 320 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + G L+R DL+++ + +RM+P+ F R R+ RDLA LGK+++L G+ Sbjct: 321 SEG--------LERLTADLRDTALDLRMVPIGTAFGRLRRVARDLAADLGKEIDLVTEGA 372 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELDK++IER+ DPL H++RN+ DHGIE PE R AAGK G + LSA GG++ +EV Sbjct: 373 ETELDKTVIERLADPLVHVIRNACDHGIETPEARRAAGKPPRGTISLSARQAGGSVVVEV 432 Query: 419 TDDGAGLNRERILAKAASQG-LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDGAG++ + A+A ++G L +++ ++ L+F PGFSTA VT VSGRGVGMDV Sbjct: 433 RDDGAGIDPAAVRARAEARGLLQPGARLAEADLLNLVFQPGFSTARTVTSVSGRGVGMDV 492 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VKR+++ + G V ++S G GT +RI LPLTLAI++G+ V V ++LPL AV E + Sbjct: 493 VKRSVEALRGTVALESAPGAGTALRIELPLTLAIIEGLLVEVGGGSYVLPLAAVEECVGL 552 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 A++ A G + VRGE +P + L +VF V GA+ + Q +V ++G R L VD Sbjct: 553 TAAEVEA-ARGAHLAPVRGELVPYLRLREVFEVRGARPDHEQIAIVRTEAG--RCGLAVD 609 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 Q+ GQ Q V+K++ +R V G+S ATILGDGSVA I+DV+AL Sbjct: 610 QVAGQLQAVIKSMGQMFRSVKGLSGATILGDGSVAPILDVAAL 652 >UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Tax=Clostridia RepID=B1I5I0_DESAP Length = 701 Score = 319 bits (818), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 189/424 (44%), Positives = 272/424 (64%), Gaps = 22/424 (5%) Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNEST--SIRVAVEKVDQLINLVGELVITQSMLAQ- 290 TP AA AP RVE+ + +++ ++R+ V+K+D L+NLVGELVI ++ L + Sbjct: 269 TPGGTSTAAGPAPAARVEQFDSLNAHKKAIRTVRIDVQKLDSLMNLVGELVIERTRLERF 328 Query: 291 --------RSSEL-DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 RS E+ D +N ++ + +GQ+ DLQE +M RM+P+ VF+R+PR+VR Sbjct: 329 ADIMELKYRSEEMIDTLN--EISSHLGQI---TSDLQEEIMMARMLPIAQVFNRFPRMVR 383 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DLA KLGK+V L + G TELD+++IE I DPL HL+RN++DHG+E+PE+RL GK G Sbjct: 384 DLAQKLGKEVNLVIEGRDTELDRNVIEIISDPLVHLIRNAVDHGLEMPEERLGFGKPRAG 443 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPG 458 L L A HQ +I I V DDG GL+ +R+ A+A L E ++D + LIF G Sbjct: 444 TLTLRAFHQENHIVIIVEDDGRGLDPDRLRARAREMQLLDEETLARLTDQDALNLIFQAG 503 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FSTA V+D+SGRGVGMDVVK I+++ G VE++S G GT + I LPLTLAI+ + V Sbjct: 504 FSTAADVSDISGRGVGMDVVKSQIEQINGLVEMRSTPGQGTAVTIKLPLTLAIIRALMVE 563 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 + + V+ PL V+E++Q A++ + E V+ VRGE LP+V L ++F E Sbjct: 564 LGNYVYAFPLANVVETMQIDPAEIRMIRDAE-VVVVRGEVLPLVRLRRLFRQRETDPEG- 621 Query: 579 QGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 + VVI+ +G R ++VD+L+G+ ++V+K+L ++PGIS ATILGDG VALIVDV Sbjct: 622 RLYVVIIGTGQDRVGVVVDRLVGEQEIVIKSLGDLLGRIPGISGATILGDGKVALIVDVR 681 Query: 639 ALQA 642 AL A Sbjct: 682 ALLA 685 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 51/94 (54%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S+ Q F DE DE + + L L+ E + E + IFRAAH+IKG +G G+ + Sbjct: 4 SEEIQVFLDELDEKIEILNDGFLALEREGDNPETIQEIFRAAHTIKGSSGILGYDQMSAL 63 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 TH MENLL R G + ++++ LE D ++ Sbjct: 64 THEMENLLTLLREGRVHSTPRMVDVLLEALDTLK 97 >UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V496_9FIRM Length = 679 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 163/387 (42%), Positives = 259/387 (66%), Gaps = 12/387 (3%) Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH--GDLITSMGQLQRNARD 316 ++S S+RV +EK+D L+NL+GELVI + L Q H DL+ ++ Q+ R D Sbjct: 297 HQSQSVRVDIEKLDTLMNLMGELVINKVRLEQIGQ-----THRMSDLMETLEQMDRVTGD 351 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQ VM +RM+P+ VF+R+PR+VRD++ +LGK++ LT+ G TELD+++I+ I DP+ H Sbjct: 352 LQNIVMKVRMVPVSAVFNRFPRMVRDVSKELGKEINLTIEGEETELDRTVIDEIGDPIMH 411 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 L+RNSLDHG+E P+ R A GK+ VG + L A H+G N+ I +TDDGAG++ ++I KA Sbjct: 412 LLRNSLDHGVESPDAREAKGKSRVGEVGLIARHEGNNVVIMITDDGAGIDADKIRRKAVE 471 Query: 437 QGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +G+ + ++++ D + LIF PGFSTAEQ+TD+SGRGVGMDVV+ I+ + GHV++++ Sbjct: 472 KGMISQSEADSLDDADAVRLIFLPGFSTAEQITDISGRGVGMDVVRSKIEALSGHVDVET 531 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G+ +I LPLTLAI+ M VRV +E++ +PL ++ ++ D+ + E V+ Sbjct: 532 HIDEGSIFKIKLPLTLAIIQAMLVRVQEEMYAIPLTSIDSTINIEPTDIQTVQNKE-VIV 590 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 +RGE +PI+ + + V K ++ + VV++ +G + ++VD LIGQ ++V+K L + Sbjct: 591 LRGEIIPIIRMEEALQVPHTK-DSDEHFVVVVHAGEAKAGIVVDNLIGQQEIVIKTLGNL 649 Query: 614 YRKVPGISAATILGDGSVALIVDVSAL 640 + + AT+LGDG VALI+DV+ + Sbjct: 650 FAGLKLFGGATVLGDGRVALILDVATM 676 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/120 (29%), Positives = 65/120 (54%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DE+ E L + + LL L+ + +N IFR AH++KG + T GF+ + E TH Sbjct: 5 YMDMFLDESHEHLQSLNEGLLRLEENMEEISAVNDIFRNAHTLKGMSATMGFAKIAELTH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 ME++LD R+ +++LN DI++ + D +++ +D+ + D + L ++ Sbjct: 65 EMEDVLDLVRKEQLKLNEDIMDTLFKCLDSLEQMVDSVGNGEAEDVVDVSDLVAKLSSIS 124 >UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria RepID=Q7NV36_CHRVO Length = 721 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 170/398 (42%), Positives = 264/398 (66%), Gaps = 20/398 (5%) Query: 259 NESTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVNHGDLITSMGQLQRNAR 315 +S IR+ K+D+LIN VGELVI + ++AQ + G+L+ S+ + Sbjct: 324 GDSQYIRIEASKLDRLINRVGELVIASAGTKLIAQSRGD------GELLESVAVINTLVE 377 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +++ +++RM+P++ +FSR+PR+VR+++ +L K ++L + G TE+DKS++E++ DPL Sbjct: 378 SIRDDALTLRMVPVDEIFSRFPRMVREVSKQLNKAIQLEIKGGDTEIDKSMVEKLTDPLM 437 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 H+VRN++DHG+E EKR AAGK G + L+A H G++ +EV DDG G+NRE++LAKA Sbjct: 438 HIVRNAVDHGLESAEKRRAAGKPEQGTVTLNAYHDAGSVVVEVKDDGGGINREKVLAKAI 497 Query: 436 SQGLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +GL V+E +SD E LIF PGFSTA+ V+D+SGRGVGMDVVKRNI+ + G +EIQS Sbjct: 498 ERGL-VAEGRLLSDQETLQLIFLPGFSTADAVSDLSGRGVGMDVVKRNIEALRGEIEIQS 556 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 + G G+T R+ LPLTLAI+DG V V + ++PL+ ++E + E + A R + Sbjct: 557 QPGVGSTFRLRLPLTLAIIDGFRVEVNESALVMPLDMMIECVDMPEGAMSQRA---RQVN 613 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 +RG++LP V L ++F + A A +VI+ G R ++VD+L+G+ Q V+K L Sbjct: 614 LRGDWLPFVSLRELFGLPPA---AHPEYIVIVHYGEHRAGIVVDRLMGEVQAVIKPLGEI 670 Query: 614 YRKVPGISAATILGDGSVALIVDVSAL--QAINREQRM 649 ++ + GIS +TILG+G AL++D+ L A RE+R+ Sbjct: 671 FKSLRGISGSTILGNGKPALVLDIPQLIHHACRRERRL 708 Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 43/108 (39%), Positives = 60/108 (55%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + FF+E+ EL +E LL P E N +FR AH+IKG AG FG L Sbjct: 1 MDLSKAREVFFEESRELCDGLESALLDPVAHPPGDETYNLLFRTAHTIKGSAGIFGLDAL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 H+MEN+L+ R G++ L+ D+I L L D ++ LDA S + Sbjct: 61 VRFAHVMENVLERLRSGQVALSDDLITLLLACNDHLRRLLDASAVSDQ 108 >UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related kinases n=2 Tax=Desulfovibrionaceae RepID=Q1MP79_LAWIP Length = 737 Score = 318 bits (815), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 185/426 (43%), Positives = 279/426 (65%), Gaps = 18/426 (4%) Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELV 282 +T+ PK PP +K +++ P + T+ S++IRV EK+D L+NL+GEL+ Sbjct: 301 LKTISNVPKNIKPPSVK-SSQAKPAN--ANDATSEQKSSSTIRVDHEKLDHLMNLIGELI 357 Query: 283 ITQ---SMLAQRSSE----LDPVNHG-DLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 I + +MLA+R E D V DL + + R + +LQ+++M +RM+P+ VFS Sbjct: 358 INRNRYTMLARRLEEQGTNADVVEVAQDLSETTYAMARISDELQDTIMKVRMVPVASVFS 417 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+PRLVRDL+ K GK+V+L L G TELDKS++E I DPL HL+RN++DHGIE +R+A Sbjct: 418 RFPRLVRDLSRKSGKEVDLVLEGEETELDKSVVEVIGDPLVHLIRNAVDHGIEPESERIA 477 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAM 452 GK++ G + L A H+G ++ IE+ DDG GL+ +++ A +G+ +E + DD AM Sbjct: 478 QGKSTKGKVTLRAYHKGNSVAIEIEDDGKGLDPDKLREVAIKKGILSAEEAKLLDDREAM 537 Query: 453 -LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 LIFAPGFS+AE++TD+SGRGVGMDVV+ NI+ + G + I S+ G GT + LPLTLAI Sbjct: 538 ELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSISIFSEIGKGTRFTLSLPLTLAI 597 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 +D + V VA EVF +PL+AV E+ + + L+ + G + + +RGE L ++EL ++ N+ Sbjct: 598 IDALMVNVAGEVFAIPLDAVSETTKLEASKLNDI-NGRKAVTLRGEVLGLIELSELLNL- 655 Query: 572 GAKTEATQGI-VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + E T + VVI+ S RR L+V++L+ + ++V+K L S +P IS ATI+GDG Sbjct: 656 -PQEEHTDVLSVVIIHSNERRLGLVVNKLLERQEIVIKPLGSYLGDIPCISGATIMGDGG 714 Query: 631 VALIVD 636 V LI+D Sbjct: 715 VILILD 720 >UniRef50_Q0AYL2 Putative CheA signal transduction histidine kinases n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYL2_SYNWW Length = 677 Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 166/384 (43%), Positives = 254/384 (66%), Gaps = 12/384 (3%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQES 320 ++RV +E++D L+NLVGELV+ + L Q SS++D +N ++ Q+ R + DLQ Sbjct: 299 TVRVDIERLDILMNLVGELVMHKGRLEQIGASSKIDELNE-----TIEQIDRISGDLQSV 353 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM +RM+P+E VF+R+PR+VRDLA +L K+V+ + G TELD+++I+ I DPL HL+RN Sbjct: 354 VMKVRMVPVEQVFNRFPRMVRDLAKELNKEVDFLIEGKETELDRTVIDEIGDPLVHLLRN 413 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHG+E P++RL GK +IL A H+G N+ IEV DDGAG+N +R L KA +G+ Sbjct: 414 AVDHGVESPQERLKRGKPQKATVILRARHEGNNVYIEVEDDGAGINIKRTLEKAVEKGII 473 Query: 441 V---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 +E +S +E + ++F+PGFST E +TDVSGRGVG+DVVK I+ + G + + S+ G Sbjct: 474 SAKEAEVISPEEASQILFSPGFSTTENITDVSGRGVGLDVVKTKIESLSGEIFVDSRPGQ 533 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT RI LPLTLAI+ + + V DE++ +PL +V E+ + D+ + + V+ +RG Sbjct: 534 GTRFRIKLPLTLAIIQALMISVHDEIYAIPLGSVDETTMIKNEDIK-MVQNQEVIVLRGN 592 Query: 558 YLPIVELWKVFNVAG-AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 LP+ L + + G A + VVI++ G R+ L+VD LIGQ ++V+K+L Sbjct: 593 VLPLFRLASLLEIPGEAAANEEEMYVVIVRKGERQIGLVVDTLIGQQEIVIKSLGKILAG 652 Query: 617 VPGISAATILGDGSVALIVDVSAL 640 +PGI+ A + GDG V LI+D++ L Sbjct: 653 IPGIAGAIVAGDGFVRLIIDIATL 676 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 35/99 (35%), Positives = 58/99 (58%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M MD+S + F +E+ E L + Q LL + + D LN IFRAAH++KG + T GF Sbjct: 1 MKMDMSQYLDVFLEESKEHLESLNQKLLDWEKNSGDIAALNEIFRAAHTLKGMSSTMGFE 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 L + TH MEN+L + + G +++ ++++ + D +Q Sbjct: 61 DLADLTHHMENILSDLKEGLLEVTPQVVDILFQCFDRLQ 99 >UniRef50_B5YIY0 CheA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIY0_THEYD Length = 565 Score = 317 bits (813), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 171/425 (40%), Positives = 273/425 (64%), Gaps = 22/425 (5%) Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 ET E+ K S+ P + QAP + E ++RV VE++D++++L GE+V+ Sbjct: 147 ETEEIESKPSSKP--EEVVTQAP----------KEKEVATLRVDVERIDKVMDLAGEIVL 194 Query: 284 TQSMLAQRSSELDPVNHGD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPR 338 ++ L S++L+ GD L+ + L R DLQ +VM +RM P++ VF ++PR Sbjct: 195 ARNRLLNLSNKLEAKYAGDEHVEGLVETTAFLDRVTSDLQLAVMKMRMQPLQKVFVKFPR 254 Query: 339 LVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKN 398 +VRDLA LGK+V+L ++G TE+DKS+IE I DPL H++RNS+DHGIE PE+R++ GK Sbjct: 255 MVRDLARTLGKEVDLEIIGEDTEVDKSVIEHIGDPLVHIIRNSIDHGIESPEERISKGKP 314 Query: 399 SVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIF 455 S G ++++A +G I I+++DDG G++ E + AKA ++GL +E MS++ + LIF Sbjct: 315 SKGKIVINAYQKGTQIVIDISDDGKGIDYEAVKAKAITKGLITLEEAEKMSEEAIINLIF 374 Query: 456 APGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGM 515 PGFST + T++SGRGVGMDVVK N+ K+ G+VEI +++ GTT RI LPLTLAI+ M Sbjct: 375 LPGFSTKDVSTELSGRGVGMDVVKSNVAKLNGYVEIFTEKDKGTTFRISLPLTLAIIQAM 434 Query: 516 SVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT 575 V+V +E++ +P + + E+L+ ++ + G+RVL +R LP+ L ++ + +G Sbjct: 435 MVQVGEEIYAIPQSMIEETLRIGIDEIKEVT-GQRVLTIRDRVLPLFLLNEILSTSGG-V 492 Query: 576 EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIV 635 + + +++ G RR+ + VD +IGQ ++V+K + + GI ATI GDG V LI+ Sbjct: 493 DNDRKYILVASVGDRRFCISVDSVIGQEEIVIKTINGIDSEECGIMGATITGDGKVVLIL 552 Query: 636 DVSAL 640 D++ L Sbjct: 553 DLAVL 557 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 8/192 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ ++ + F EA+E+L ++ L V + DAE +N IFR H++KG AG GF Sbjct: 1 MADEMDEIINEFIVEAEEILEQLDP-LFVELEQKQDAEIINEIFRGMHTLKGAAGFLGFQ 59 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKD---IMQEQLDAYKQSQEPDAASFD 117 + + H E +L + R GE+ ++ +I + L+ D I+ + A ++ E D Sbjct: 60 NVVDVAHRAETILKKVREGEIPISAEITDAILKAVDTLRILISHIKAKEEITENIQPILD 119 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR-SQSPRRIILSRLKAGEVDLLE 176 + +AL + +L+ +T + + K+E ++ +S+ S P ++ K EV L Sbjct: 120 LLDKALEKASLQEPEKTEEIEQK---IEKAETEEIESKPSSKPEEVVTQAPKEKEVATLR 176 Query: 177 EELGHLTTLTDV 188 ++ + + D+ Sbjct: 177 VDVERIDKVMDL 188 >UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIR9_9RHOB Length = 650 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 168/382 (43%), Positives = 253/382 (66%), Gaps = 2/382 (0%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV +++VD+++N+VGEL+I Q++L+QR +L L + + ARDLQE VM Sbjct: 254 TLRVDLDRVDRMMNVVGELIINQAVLSQRIDDLGLSAGASLSGDLEDYRALARDLQEGVM 313 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 +IR P++ +FSR R+VR+ A GK V L G+ TE+DK++++ + DPLTH++RN++ Sbjct: 314 AIRAQPVKPLFSRMSRIVREAATATGKDVRLVTEGAETEIDKTVVDSLADPLTHMIRNAI 373 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIE PE+R+A GK G L L+A H+ G I +E+ DDGAGL+R RI A A ++GL Sbjct: 374 DHGIEPPERRVALGKPPAGTLRLTAAHRAGAILLEIADDGAGLDRPRIRAAAEARGLVSP 433 Query: 443 E-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 E +++D E+ L+F PGFST+ ++ +SGRGVGMDVVK I +GG V I ++ G GTT Sbjct: 434 EADLTDAEIDNLLFLPGFSTSSVISSLSGRGVGMDVVKTAIAALGGRVSIATRPGAGTTF 493 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLA+LDGM V +A + ++P+ + E+++ ADLH L R+L +RG ++P+ Sbjct: 494 SITLPLTLAVLDGMIVTIAGQTMVVPIATINETVRAAPADLHKLGADGRLLRLRGRHVPV 553 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRY-ALLVDQLIGQHQVVVKNLESNYRKVPGI 620 V+ + + A + ++++ S R AL V+++ Q QVV+K+L VPG+ Sbjct: 554 VDAAAALGLPPPRAPAEEVMLLLCDSEARGLCALAVERIWEQRQVVIKSLTGTCGHVPGL 613 Query: 621 SAATILGDGSVALIVDVSALQA 642 SAATILGDG +A I+D AL A Sbjct: 614 SAATILGDGRIAFILDPEALVA 635 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/91 (36%), Positives = 52/91 (57%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 QT+F+E ++LL + L L A DAE ++A+FRA HSIKGGAG F + + E +H Sbjct: 7 QTYFEECEDLLESLADGLAALAAGAADAETVHALFRAVHSIKGGAGAFKLAAVAEFSHTF 66 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 E +LD R ++ + ++ L D + + Sbjct: 67 ETVLDRLRADALEPSAPLVALLQRAADHLAD 97 >UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 Length = 674 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 217/676 (32%), Positives = 366/676 (54%), Gaps = 59/676 (8%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDA---EQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 +++ E +L+ +E LVL E + E ++ IFR H+IKG + + + Sbjct: 12 ESYIFETSDLINKLET--LVLDNENSNCYCQECIDEIFRIVHTIKGSSAMMSYDYISMLA 69 Query: 67 HLMENLLDEARRGEMQ-LN-TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+LL R + L+ ++ +L L++ D ++ ++D K D I + ++ Sbjct: 70 HSIEDLLYFIRENNSEDLDYKELSDLILKSVDFIKGEIDKIKIGNGVQGICDDMINENIK 129 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQS--RSQSPRRIILSRLKAGEVDLLEEELGHL 182 L +K + P K + D Q +S ++ L + D + E Sbjct: 130 FLEKLSKCDLP----------KKDNIDSQKVDKSDIDKKDTLYKAVIFFEDNCQMENLRA 179 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLC------FVIEADQITFETVEVSPK----I 232 T+ + K +P DI ++D T L I+ D+ ++E VE K + Sbjct: 180 YTVVETFKEFCHELYYVPEDIIDNDNTCNLIREEGFKLFIKCDK-SYEEVEQILKHTVLL 238 Query: 233 STPPVLKLAAE---------------------QAPTGRVEREKTTRSNESTSIRVAVEKV 271 + ++K+ + Q G+ ER +SN I V VEK+ Sbjct: 239 KSVKLIKMEEDEEVHPVSRPKENVDLNGHVPYQPLPGKQER-IPDKSNVQNFINVKVEKL 297 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D+L++LV E+VI +SM+ + + +L + + S QL++ +++Q++VMS+RM+P+ Sbjct: 298 DKLMDLVEEMVIAESMVTE-NPDLKGLKLDNFRKSARQLRKITKEIQDTVMSVRMVPVYG 356 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 +F + R+V D+ KL K+V+L +G TE+DK++IE I DP+ HLVRNS+DHGIE E Sbjct: 357 IFHKMNRIVHDMNKKLNKKVKLKFIGEDTEVDKNIIEHISDPIMHLVRNSIDHGIESAEC 416 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL--TVSENMSDDE 449 R + GK+ +GN+IL A++Q + + + DDGAG N+E IL KA +GL ++ MSD E Sbjct: 417 RRSLGKSEIGNIILEAKNQDNYVVVMIKDDGAGFNKEIILKKAREKGLLKKSADEMSDKE 476 Query: 450 VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTL 509 + LIF PGFS E +T+ SGRGVGMDVV +NI+++GG V +QSK GT I I +P TL Sbjct: 477 IYDLIFIPGFSIKENITEFSGRGVGMDVVMKNIKEIGGIVTVQSKDNEGTLITIKIPSTL 536 Query: 510 AILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 AI+DG++VRV D + +P+ + + +P+ D+ + E ++ VR + P++ + K++ Sbjct: 537 AIIDGINVRVGDYYYTIPVTVITKFFRPKADDIFHIEKNEMIM-VREKCCPVIRIHKLYG 595 Query: 570 VAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK---VPGISAATIL 626 + E GI+V++++ + + D+L+GQ QVVVK L ++ + GIS T+L Sbjct: 596 IETNIKELADGIIVMVKNEDKFVCIFADELLGQQQVVVKPLPDYVKRIKNIKGISGCTVL 655 Query: 627 GDGSVALIVDVSALQA 642 GDGS++LI+++ L Sbjct: 656 GDGSMSLILNIGELNG 671 >UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=Q2ILI0_ANADE Length = 687 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 231/673 (34%), Positives = 354/673 (52%), Gaps = 56/673 (8%) Query: 12 FFDEADELLADMEQHLLVLQP---EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 F EA E + + L+ L+ E PD + LN +FRAAH++KG + FG L H Sbjct: 13 FVSEAQETIDALGHGLMRLEAGGHEDPDPDLLNGVFRAAHTLKGLSSMFGVERLTRLAHA 72 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQE---QLDAYKQSQEPDAASFDYICQALRQ 125 +E+LLDE R G L+ ++L LE +++ + A DAA+ + LR Sbjct: 73 LEDLLDEVRLGRRGLDRAAVDLLLEAPEVLSRIVAEEAAGAPPASTDAAA--RLTDRLRA 130 Query: 126 LALEAKGETPSAVTRLSVVAK-----SEPQDEQSRSQSPRRIILSRLKAG-EVDLLEEEL 179 + +++ + +E ++ + R+ + + L R+K E+D + +L Sbjct: 131 GEAPPPARAADPLATVALGPEVRDILTEYEEHRLRANLAKGLALHRVKVSFELDGFDRDL 190 Query: 180 ----GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA--DQITFET-----VEV 228 G L L +VV S P IA + L F + D I E VEV Sbjct: 191 AALSGRLKRLGEVVSTLPSSDVRDPQSIAFE-----LLFASKEPLDAIRREAGPAAAVEV 245 Query: 229 SPKISTPP-------------VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLI 275 P++ PP L+ P G E + + S ++RV + K+D+L+ Sbjct: 246 VPRVEAPPAAARAEPPRRPAGAAALSPAPEPPGD---EAASLRSASQAVRVDIHKLDRLM 302 Query: 276 NLVGELVITQSMLAQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPME 330 VGELV+ ++ L + +L DP +L + L+R +LQ ++ +RM+P+E Sbjct: 303 TAVGELVLVKTSLVALAEQLRADGRDPAVAAELQRTNRTLERRLEELQAGILEVRMVPLE 362 Query: 331 YVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPE 390 VF + R+VR LA ++GK ++L + G ELDK ++E + DPL HL+RN++DHGIE PE Sbjct: 363 QVFDKLSRMVRKLAREIGKDIDLRVSGGEVELDKLIVEDLSDPLMHLIRNAIDHGIEAPE 422 Query: 391 KRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSD 447 +R AGK +G + L A QG + I V DDGAG++ +RI A +GL + + +S Sbjct: 423 RRARAGKPPLGTVRLEASQQGNKVRIVVEDDGAGIDEDRIREVAVQRGLAAAGDVGALSR 482 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 E+ LIF PGFSTA QVT +SGRGVGMDVVK N+ + G +++ +++G GT I LP+ Sbjct: 483 RELMNLIFVPGFSTARQVTSLSGRGVGMDVVKSNVAALSGIIDLHTERGRGTRFEITLPV 542 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAI+ + V VA + +PLN+V+E L+ R AD+ L+ E V+ VRG LP+V L Sbjct: 543 TLAIVRALVVWVAGRTYAVPLNSVLEILEVRAADVRTLSTRE-VVTVRGATLPLVRLSSF 601 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 F + GA + VV++ R + VD ++GQ VVVK L + + V GI+ AT LG Sbjct: 602 FGLPGAGA-PERLFVVVVGLAQERLGVAVDAVVGQQDVVVKPLGAVLQGVRGIAGATDLG 660 Query: 628 DGSVALIVDVSAL 640 L++DV A+ Sbjct: 661 SRRTVLVLDVGAI 673 >UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=Q311M2_DESDG Length = 954 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 173/396 (43%), Positives = 258/396 (65%), Gaps = 11/396 (2%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQ---SMLAQRSSELDPVNHGDLITSM 307 +++ + S++IRV EK+D L+NL+GEL+I + +MLA+R VN D+ ++ Sbjct: 547 DQQAVHKGKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEGETDVNVADVAQNL 606 Query: 308 GQ----LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+VEL + G TELD Sbjct: 607 TETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVELIMEGEETELD 666 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 KS++E I DPL HL+RN++DHG+E E R+A GK G + L A H+G ++ IE+ DDG Sbjct: 667 KSVVEVIGDPLVHLIRNAMDHGVEPEEDRIAKGKRPKGRVWLRAYHKGNSVAIEIEDDGK 726 Query: 424 GLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++ ER+ A ++G+ E ++ D E LIFAPGFS+AE +TD+SGRGVGMDVV+ Sbjct: 727 GIDPERMREVAVNKGIISPEEAKSLDDREAMELIFAPGFSSAETITDISGRGVGMDVVRT 786 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+ + G V IQS+ G GT + LPLTLAI+D + V V+DE + +PL+AV E+ + EA Sbjct: 787 NIKNLKGSVSIQSEIGKGTRFILSLPLTLAIIDALMVNVSDETYAIPLDAVSETTK-IEA 845 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + + + +RGE L IV L ++ + G + VV++ RR L+VD+L+ Sbjct: 846 ERLTDVNNRKAVTLRGEVLGIVTLSELLGLEGTTEDDEVLSVVVIHDNDRRLGLVVDRLL 905 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 + ++V+K L + GIS ATI+GDGSV LI+D Sbjct: 906 ERQEIVIKPLGEYLGDLRGISGATIMGDGSVVLILD 941 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 2/105 (1%) Query: 1 MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D D + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFMDPEIFADFILEAKEHLETIEPNLLELENSPDNLSLLNEIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD 103 + + H EN+LDE R+GEM ++++I+++ L D +++ +D Sbjct: 61 LNRINSLAHKAENILDELRKGEMSVSSEIMDVILSATDALRQMID 105 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 9/154 (5%) Query: 12 FFDEADELLADMEQHLLVLQ--PEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 F +EA ++ ++ LL L+ P A + + +N +FR H++KG +G GF+ L TH Sbjct: 193 FVEEARDISENLNAGLLELETNPHA-EGDLVNDLFRYFHNLKGNSGIIGFAELNSLTHEA 251 Query: 70 ENLLDEARRGEM---QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 E LL++ R+GEM D++ + ++ D M E++DA P D + + L++ Sbjct: 252 ETLLNKVRKGEMPSSHALVDLLLVVVDYIDAMVERIDATTGVATP--VRIDDLLERLQKA 309 Query: 127 ALEAKGETPSAVTRLSVVAKSE-PQDEQSRSQSP 159 E + P+ A+ E PQ+ Q P Sbjct: 310 VTEGIIDAPARPAGQQTAAQPEAPQESAPAQQEP 343 >UniRef50_A3ZLD6 Two-component system sensory/regulatory protein-like (Che family protein) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZLD6_9PLAN Length = 893 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 182/425 (42%), Positives = 257/425 (60%), Gaps = 20/425 (4%) Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT---- 284 +P TPPV+ A A E +N +IRV V +D+L+NL GELV+ Sbjct: 158 TPVAETPPVVAEPAPIAKAASEEHRPEVSANVEANIRVPVSVLDRLMNLTGELVLCRNQV 217 Query: 285 -QSMLAQRSSELDPVNHG-DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 Q++ + S L+ V G D +TS +LQ++VM RM P+ VF+R+ R+VRD Sbjct: 218 IQAISCRNDSGLEAVASGLDQVTS---------ELQDAVMQTRMQPIGSVFNRFIRVVRD 268 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 L KLGK+ L + G E+DKS+IE I DP+THL+RNS+DHG+E P+KR+AA K+ G Sbjct: 269 LGAKLGKECNLQIDGKEVEVDKSIIEAIGDPMTHLIRNSMDHGLETPQKRVAADKSPSGQ 328 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGF 459 + L A HQ G + IE+ DDG G+N + KA S+G+ ++ MSD + LIF GF Sbjct: 329 INLRAYHQAGKVRIEIEDDGQGINPAILKEKAVSKGVITQDQADQMSDRDAVRLIFHAGF 388 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STAE++TDVSGRGVGMDVV+ NI+K+GG V+++S G GT I I LPLTLAI+ + V Sbjct: 389 STAEKLTDVSGRGVGMDVVRSNIEKLGGTVDVESTIGRGTNILITLPLTLAIIPSLIVES 448 Query: 520 ADEVFILPLNAVMESLQPREADLHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 F +P + E ++ R D H L G +L +RG LPIV + ++ N+A + Sbjct: 449 CGNRFAIPQANISELVRIRSDDEHRLTRVKGVEMLRLRGSLLPIVRMKQILNLANEEAVT 508 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 T ++++++G RY L VD L ++VVK L + R +S ATILGDG +ALI+DV Sbjct: 509 TSSSIIVVETGRARYGLAVDGLHDSEEIVVKPLGRHLRSCKCLSGATILGDGHIALILDV 568 Query: 638 SALQA 642 S + A Sbjct: 569 SGIGA 573 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 65/119 (54%), Gaps = 5/119 (4%) Query: 12 FFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 F E++E LA++E LL ++ + D + +N +FRA HSIKG AG G + + +H + Sbjct: 11 FVIESNEHLANVESQLLAIEAGGASVDVDLVNTVFRAIHSIKGAAGFLGLRNINDLSHSL 70 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL 128 EN+L++ R E+ N+ + ++ L D ++ ++ S A F + L Q+A+ Sbjct: 71 ENVLNKLRNLELVPNSAMTDVMLRASDQLRSMINDIDNSNNMPIADF---VEQLDQIAV 126 >UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF5_9BACT Length = 693 Score = 315 bits (806), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 172/411 (41%), Positives = 268/411 (65%), Gaps = 11/411 (2%) Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A +AP VE+ K + +IRV V ++D L+NLVGELV++++ + Q S +L+ Sbjct: 140 GAPEAPQKNVEQVKKAAMSIEQTIRVDVSRLDSLMNLVGELVLSRNRIGQISGDLEKKFE 199 Query: 301 GD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 G+ L+ + Q+ +LQ +VM RM+P+ VF+++PR+VRDL +GK V+L + Sbjct: 200 GEFLIEQLMETTSQIGLITTELQLAVMKTRMVPIGKVFNKFPRMVRDLCRDMGKDVDLVI 259 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TELDKS++E I DPL H++RNS+DHG+E+PE R GK G + LSA H+G +I Sbjct: 260 SGEETELDKSVVEEIGDPLIHMIRNSVDHGVEVPEIRRKRGKPDKGIVNLSAYHEGNHIV 319 Query: 416 IEVTDDGAGLNRERILAKAASQG-LTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 +E+ DDGAG++ E + AKA +G +T+ E N+ ++ L+F PGFSTA Q+TDVSGRG Sbjct: 320 VEIKDDGAGMDAEVLKAKAVEKGVITIDEAKNLDNESAYGLVFKPGFSTAAQITDVSGRG 379 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVVK NI+K+ G + I+S+ G GT R+ LPLTLAI+ + V V+ E+F +PL +V+ Sbjct: 380 VGMDVVKTNIEKLNGIINIESELGHGTRFRLKLPLTLAIIQALLVDVSGEIFAIPLVSVI 439 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E+++ +E ++H G E VL++R L ++ L +++ + + + +VV L +R Sbjct: 440 ETVRIKETEIHSFEGRE-VLKLRDSVLSLIRLDEIYELQESLNDDIYVVVVGLAE--KRL 496 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +V++L+GQ ++V+K+L GI+ ATI+GDG V LI+DV+ + I Sbjct: 497 GFVVNKLVGQEEIVIKSLGDYLSGNEGIAGATIMGDGRVRLIIDVAGVMEI 547 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 5/147 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ D Q F E +E++ ++ L+ L+ D + LN IFR AH++KG + GF + Sbjct: 5 DMQDLVQDFILETEEIIEALDHDLVELETRKNDLDLLNKIFRGAHTMKGASSFLGFDKMS 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH E +L++ R+ E+ + I+++ LE DI + + K D A + + Sbjct: 65 GVTHHAEEILNKLRKNEISVTPGIMDILLEFVDITKTIIVDIKNG--TDVAD---VTDLI 119 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQ 150 +L L +G+ P A A PQ Sbjct: 120 NRLKLANEGKLPGASDATRSGAPEAPQ 146 >UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XW80_LEPCP Length = 756 Score = 314 bits (804), Expect = 8e-84, Method: Compositional matrix adjust. Identities = 171/386 (44%), Positives = 251/386 (65%), Gaps = 12/386 (3%) Query: 259 NESTSIRVAVEKVDQLINLVGELVIT---QSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 +E+ IRV +++D +INL+GELVI +MLA+++ + + L + + R Sbjct: 345 DENRYIRVHADRLDAVINLLGELVIAGAGAAMLARQTRQRN------LHEANQNVVRLIE 398 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +++ + +RM+P+ FSR+ R+VRD A +LGK+V L +VG TELDKS++ERI DPL Sbjct: 399 EIRNGTLQLRMVPIGETFSRFRRVVRDTASQLGKEVTLEIVGGETELDKSMVERIADPLM 458 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRN LDHG+E P +R AAGK +VG L+LSA H+ G++ I + DDG G++RER+L +A Sbjct: 459 HLVRNGLDHGLETPAERQAAGKPAVGRLVLSARHESGSVLIRIDDDGRGIHRERVLQRAW 518 Query: 436 SQG-LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +G L D E+ LIF PGFSTAEQVT +SGRGVGMDVV+RNI+ + G V++ S Sbjct: 519 DRGLLERGTRPPDAEILKLIFEPGFSTAEQVTSLSGRGVGMDVVRRNIEALRGSVQLHST 578 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 +G GT I I LPLTLAI+DG V V FI PL+ V+E ++ R G +E+ Sbjct: 579 EGLGTRIDIRLPLTLAIIDGFLVSVGASKFIFPLDTVVEVIENRPTTTGFDRRGRGTVEL 638 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RG+ LP+V L +++ E ++++ +G + ++VD L+GQHQ V+K L + Sbjct: 639 RGQVLPVVSLRVFYDLESPPPERDN--IIVVNAGEAPFGIVVDALLGQHQTVIKPLGRIF 696 Query: 615 RKVPGISAATILGDGSVALIVDVSAL 640 + + G+S ++ILG+G VALI DV +L Sbjct: 697 KMLRGLSGSSILGNGEVALIADVMSL 722 Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 54/92 (58%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++D TF +EA+E +EQ LL L+ + D + L+A+FR AH++KG AG FG + + Sbjct: 13 LADALPTFINEANEQTESLEQLLLQLEEQPGDRDLLDALFRCAHTVKGSAGMFGLDKVVD 72 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKD 96 TH +E LL R G + L+ + L L+ D Sbjct: 73 FTHHVETLLSRIRDGLIDLDLGVSTLLLQCND 104 >UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGB5_RHOM4 Length = 770 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 183/427 (42%), Positives = 261/427 (61%), Gaps = 22/427 (5%) Query: 233 STPPVLKLAAEQAPTGRVEREKTT--------RSNEST-SIRVAVEKVDQLINLVGELVI 283 +TPP ++E A R +T R ++ST +IRV V ++D L++LVGELV+ Sbjct: 326 TTPPATAPSSETADASRSTPAASTPSGNGQAARRDQSTETIRVEVRRLDNLMDLVGELVL 385 Query: 284 TQSMLAQRSSELDPVNHGD-------LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 ++ L Q SEL GD L + Q+ +LQ +VM RM+ + VF+++ Sbjct: 386 GRNRLLQLLSELS--TDGDNAELLRELADTTTQIDFITTELQSAVMHTRMVQIGRVFNKF 443 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PRLVRDLA + KQ+EL + G TELDKSLIE I DPL HL+RN+ DHGIE PE R A G Sbjct: 444 PRLVRDLAREFNKQIELIIEGEETELDKSLIEEISDPLVHLIRNAADHGIEDPETRRARG 503 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAML 453 K+ G + L+A +G +I IE+ DDGAG++ E+I AKA +GL + MSD E L Sbjct: 504 KSPTGRIRLAASQEGNHIVIEIEDDGAGIDPEKIKAKALEKGLITEKEATEMSDREALEL 563 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF GFSTA++V+ VSGRGVGMDVVK NI K+ G + + S G GT + LPLTLAI+ Sbjct: 564 IFRAGFSTAQRVSKVSGRGVGMDVVKTNITKLNGTISVHSVPGQGTRFTLKLPLTLAIIQ 623 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 + VRV +E F +PL++V+E + ++ + G E V+ +R +P++ + ++ V G Sbjct: 624 SLLVRVGEEAFAIPLHSVIEVVGLESDTVYTIKGRE-VIRLRDTVIPLLRVGEMLQVPGW 682 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 + VI+ R L+VD LIGQ ++V+K L + +KVPG++ +TILGDG V + Sbjct: 683 TYHPERAYAVIVGIAHHRLGLIVDDLIGQKEIVIKPLGNYLKKVPGVAGSTILGDGRVIM 742 Query: 634 IVDVSAL 640 I+DV L Sbjct: 743 ILDVGEL 749 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 4/162 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S ++ + ++F E E+ D+E LL L+ D + ++ IFRA H++KG +G Sbjct: 7 FSEEMREIVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRAVHTVKGTSGFLSLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYI 119 L H E++L+ R+G + ++++ E D+M++ L ++ +P + I Sbjct: 67 QLSLLAHHFEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVEERNLQP--IPLEDI 124 Query: 120 CQALRQLA-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR 160 + L+ LA EA + T + S P QS S P+ Sbjct: 125 LRKLKALADEEAAAGSADKTTPTAPQEPSAPTPAQSASADPQ 166 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S ++ + ++F E E+ D+E LL L+ D + ++ IFRA H++KG +G Sbjct: 179 FSEEMREIVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRAVHTVKGTSGFLSLE 238 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE---QLDAYKQSQEPDAASFD 117 L H E++L+ R+G + ++++ E D+M++ Q++ K P A + Sbjct: 239 QLSLLAHHFEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVETRKLQPLPIGAVIE 298 Query: 118 YICQALRQ--LALEAKGETPSAVT 139 + QA+ + A G TP+A T Sbjct: 299 RL-QAIAEGKPAPARSGSTPAAAT 321 >UniRef50_B4UFH8 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=B4UFH8_ANASK Length = 725 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 178/396 (44%), Positives = 255/396 (64%), Gaps = 8/396 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 +++V +E+VD ++ ++GEL+I +SM+ + EL V L S+ Q+ + +RDLQ M Sbjct: 328 TVKVDLERVDSMVEMIGELIIVESMVVH-APELAAVASLRLRNSLNQMTKISRDLQNVAM 386 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 +RM+P+ F + RLVRDL+ + GK V L G TE+D+S++ERI DPL HLVRN+L Sbjct: 387 RMRMVPVRGAFQKMARLVRDLSRRTGKDVVLETSGEDTEMDRSMVERIEDPLVHLVRNAL 446 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV- 441 DHGIE +RLAAGK + L L+A H+GG+I +E+ DDG GL R+RIL KA +GL Sbjct: 447 DHGIEPEAERLAAGKAARSVLRLAAYHEGGSIVVELADDGRGLQRDRILRKARERGLVGD 506 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 + +SD EV L+F PGFSTA +VT++SGRGVGMDVVKRN++ M G V + S+ G GTT Sbjct: 507 GQELSDAEVHGLVFLPGFSTAAKVTEISGRGVGMDVVKRNVEGMRGRVTVASRAGGGTTF 566 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 R++LPLTLAI+DGM V E +ILP +++ESL+P + + AG V++VRGE I Sbjct: 567 RLVLPLTLAIIDGMLVSCGGETYILPSLSIVESLRPADDTIRRAAGRGEVIDVRGE---I 623 Query: 562 VELWKVFNVAGAKTEATQG---IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 + L ++ + GA+ A VV+++ GR+ L+VD ++ Q QVV+K L S Sbjct: 624 LPLLRLHRLLGARERAAGADDLRVVVVEGLGRKVGLVVDDVVTQQQVVIKPLGSGLGDTD 683 Query: 619 GISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +S A IL DG V LI++V L + A+ A Sbjct: 684 FLSGAAILSDGRVGLILNVDRLAGLASRDAAADRGA 719 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 6/116 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D + F +E + LA ++ LL ++ + P ++ NA+FR H+IKG AG + Sbjct: 106 DTLELIGDFLEEGLDGLARADETLLAVERDGPHPDRTNALFRVFHTIKGVAGFLELGEIV 165 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE------PDA 113 H E LLD R G L + ++ E ++ L+ +++ + PDA Sbjct: 166 SLAHTAETLLDHVRSGRAALAGEAFDVTFEATAALRSLLERLREAVDARADLLPDA 221 >UniRef50_Q7NZA8 Chemotaxis protein CheA n=2 Tax=Betaproteobacteria RepID=Q7NZA8_CHRVO Length = 737 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 183/397 (46%), Positives = 260/397 (65%), Gaps = 17/397 (4%) Query: 261 STSIRVAVEKVDQLINLVGELVI---TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 S I+V K+D LINL+GELVI + +++A+RS + L+ + + + Sbjct: 331 SRFIKVEAGKLDSLINLIGELVIAGASANLIARRSQQTQ------LVEATLGIANLIEQI 384 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 + +S+RM+ + +F R+PR+VRD++ +LGK+++L +VG+ TELDKS++E++ DPL H+ Sbjct: 385 RTGTLSMRMVQIGEIFHRFPRVVRDVSRELGKEIQLRIVGAETELDKSMVEKLGDPLLHI 444 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN++DHGIE R A GK + GNL L+A H+ G++ IEV DDG GL+RERILAKA + Sbjct: 445 VRNAIDHGIEPTAVRQANGKPAQGNLWLNAYHESGSVVIEVADDGGGLDRERILAKARER 504 Query: 438 GLTVSENMSDDEVAM-LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 GL ++ D V IF GFSTAEQVT++SGRGVGMDVV+R I+++ G+VEI S+ G Sbjct: 505 GLLGPDDEPPDSVVFQQIFEAGFSTAEQVTNLSGRGVGMDVVRRGIEQLHGNVEIDSEAG 564 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GTT RI LPLTLAI+DG V VA F+LPL AV+E ++ ADL P G + +RG Sbjct: 565 LGTTFRIRLPLTLAIIDGFLVEVAASTFVLPLEAVIECIE-LPADL-PENGVHDCINLRG 622 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 E LP++ L F + A + VV++Q G R+ L+VD L G+ Q V+K L + + Sbjct: 623 ELLPLLRLDHFFEL--PPVPAVRRNVVVVQYGDRKAGLVVDALQGEFQTVIKPLGALFNT 680 Query: 617 VPGISAATILGDGSVALIVDVSAL--QAINRE-QRMA 650 + IS +TILG G VALI+DV +L A RE +R A Sbjct: 681 LKAISGSTILGTGEVALILDVPSLIQHACRRESERFA 717 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/94 (45%), Positives = 60/94 (63%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+ QTF +E+ ELL +ME LL ++ E AEQLNA+FR H+IKG AG FG + Sbjct: 1 MDLEQALQTFLEESRELLDEMESILLDVEAEQTSAEQLNALFRTMHTIKGSAGLFGLDAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKD 96 TH ENLLD+ R G+++L+ +++ L L D Sbjct: 61 VRFTHQAENLLDQLRDGKLKLDDELVGLLLRCHD 94 >UniRef50_Q67P71 Two-component sensor histidine kinase involved in chemotaxis, CheA n=1 Tax=Symbiobacterium thermophilum RepID=Q67P71_SYMTH Length = 710 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 177/398 (44%), Positives = 263/398 (66%), Gaps = 14/398 (3%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMG 308 +T R T +RV VE +D L+N VGELVI ++ L Q S L+ GD + +++ Sbjct: 300 RTPRGGMRT-VRVDVEVLDNLMNTVGELVIERTRLQQVLSRLEVEREGDELSQTMSSALA 358 Query: 309 QLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368 QL R +LQE + RM+P+E +F ++PR+VRD+A K GK++ + G TELD+S+IE Sbjct: 359 QLGRLTGNLQEEIQRARMIPVENLFRKFPRMVRDIAQKFGKEINFIMRGEETELDRSVIE 418 Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428 I DPL HL+RN++DHGIE PE R+AAGK + G +IL A H+ +I I V DDG G++ E Sbjct: 419 EIGDPLMHLLRNAVDHGIEPPEVRVAAGKPAAGTVILEAFHEENHIIISVRDDGRGVDPE 478 Query: 429 RILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 +I A A +G+ E +SD E LI++PGFSTA++V+DVSGRGVG+DVV++NI+++ Sbjct: 479 KIRASAVRKGILSEEAARRLSDPEAINLIWSPGFSTADKVSDVSGRGVGLDVVQKNIERI 538 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G VEI+S G GT R+ LPLTLAI+ + V + ++ +PL +V+E+ + +++ + Sbjct: 539 NGSVEIRSTVGQGTEFRVKLPLTLAIIRALQVELLGTIYCIPLGSVVETDRIPVSEIQTV 598 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVA---GAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 E V++ RGE +P++ L + F + GA+ E + VVI+ GR+ L+VD LIG+ Sbjct: 599 RQREVVVK-RGEVIPLLRLAEAFELQRPEGAE-EPDEIFVVIVAVMGRQIGLVVDSLIGE 656 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VV+K L ++PGIS ATI+GDG VA+I+DVS+L Sbjct: 657 GDVVIKPLGRFIGEIPGISGATIMGDGDVAIILDVSSL 694 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%) Query: 3 MDIS-DFYQTFFDEADELLADMEQHLLVLQPEA--PDAEQLNAIFRAAHSIKGGAGTFGF 59 DIS + + F DEA+ELL ME +L L+ +A PD E + IFRAAH++KG + T G Sbjct: 5 FDISAEDIRVFLDEAEELLQTMEAGILRLESDAGDPDPEVIQDIFRAAHTLKGSSATLGH 64 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 + E TH MEN+LD R+G+ + T +++ D ++ Sbjct: 65 QRMAELTHAMENVLDRLRKGKASVTTPLVDTLFHCLDALK 104 >UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCJ9_DESAA Length = 727 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 164/406 (40%), Positives = 258/406 (63%), Gaps = 2/406 (0%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 ++E++ ++ TS+RV VEK++ L+NL E+ I S L + ++ G+ + L Sbjct: 322 QQEESRQTYRKTSVRVDVEKINHLVNLAEEIGIGLSRLQNFFGSVPDISGGEADQELENL 381 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 + R+ QE V +RM P+E F R+ R+ RD A + GK+V ++L+G TELDK +IE I Sbjct: 382 LKVNREFQERVAQVRMFPLEGTFRRFQRIARDTAFEQGKRVRVSLIGVDTELDKEVIEHI 441 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPL HLVRN +DHGIE PE+R AAGK G + A +GG I + ++DDG GL+ +RI Sbjct: 442 TDPLKHLVRNCVDHGIETPEEREAAGKLPEGVIEFRAFQKGGMILVRISDDGRGLDLDRI 501 Query: 431 LAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 +A + + E + + V +I PGFSTA +T +SGRGVGMDVV+ ++++GG + Sbjct: 502 AEQAVEREIIQPGETVDNSNVLDIICQPGFSTASAITALSGRGVGMDVVRNEVEQLGGTM 561 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 +I++++G GTT + LPLT A+L+ + ++ D +++PL V+ + + A + GE Sbjct: 562 QIETEKGKGTTFTLSLPLTFALLEALHIKDQDRSYLIPLWGVVGTQEYDPAHVKFFGAGE 621 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQG-IVVILQSGGRRYALLVDQLIGQHQVVVK 608 R+ RGEY+P+V L KV+ + + G I+V + + +R+ LLVD+++ HQVVVK Sbjct: 622 RLYTFRGEYVPVVHLSKVYGIDCGEDRVGGGSILVFIDTSRQRFGLLVDKVLDPHQVVVK 681 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +LESN++ V GIS ATI+GDGSVAL++D+ AL+ + + A + A Sbjct: 682 SLESNFKSVAGISGATIMGDGSVALVMDLFALEEMFFNRSSARSDA 727 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 61/104 (58%), Gaps = 1/104 (0%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 Q FF E D+LL E+ LL L+ ++ IFRA H++K G+ GF+ + E +HL+ Sbjct: 9 QIFFAETDDLLRSAEESLLRLENNPGSGGEVQEIFRAIHTMKSGSAMVGFTKVSEYSHLL 68 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA 113 ENLL+ R G++ + +++ LE D +++ ++ + EP+A Sbjct: 69 ENLLERVRGGQLTVTKPLVSFLLEDIDFLRKMVERGGRG-EPEA 111 >UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVX2_DESOH Length = 694 Score = 311 bits (798), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 177/418 (42%), Positives = 257/418 (61%), Gaps = 18/418 (4%) Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 ET S + T P +AE + KT +S+RV K+DQL+NLVGELVI Sbjct: 283 ETDSASTAVKTGPGAVPSAEAGVSAPAAPAKTI-----SSMRVQARKLDQLVNLVGELVI 337 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 Q+ L S +D L ++R + DL+++ + IRM+P+ F ++ R+V D Sbjct: 338 AQTRL---SRLVDQHEDAALSEIAEVIERLSNDLRDTTLDIRMLPIGSSFGKFKRVVWDF 394 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 + + GK+V+L G++TELDK++IER+ DPL HL+RNS+DHGIE PE+R AGK G + Sbjct: 395 SAQKGKEVDLVTEGAATELDKTVIERLDDPLVHLLRNSIDHGIETPEERERAGKPRHGRI 454 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM-SDDEVAMLIFAPGFSTA 462 + SAEH GGN+ I + DDG G++ E + AKA +GL S S+ EV IF PGFSTA Sbjct: 455 VFSAEHAGGNVIITIADDGRGIDPEAVRAKAVERGLLASGAAPSEKEVLNFIFEPGFSTA 514 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 Q++D+SGRGVGMDVV++NI + G V + S +G GTT+R+ +PLTLAI+DG+ +R+ E Sbjct: 515 GQISDMSGRGVGMDVVRQNITALRGKVSVSSIKGQGTTVRMTIPLTLAIIDGLEIRIDRE 574 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 FI+PL V E L+ E + +R + +P + L + F + G+ + Q +V Sbjct: 575 HFIVPLAVVSECLEHHRRR-------EGFISLRDQLVPFLRLREWFGIEGSPPQHEQVVV 627 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L+ R L+VD++IG Q V+KNL Y+++ G+S ATI GDG +ALI+DV L Sbjct: 628 ASLEK--RMVGLVVDEIIGLQQAVIKNLGRAYKEIQGVSGATIQGDGGIALILDVEPL 683 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 1/99 (1%) Query: 6 SDFYQTFFDEA-DELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 S Q F +EA +ELL ++E LL L D E +N FRA H++KG FGF + E Sbjct: 5 SRVRQAFIEEAREELLPELESALLELGHAPEDMELINRAFRALHTLKGSGAMFGFDRISE 64 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD 103 H +E + D R G ++ ++ L L KD Q +D Sbjct: 65 LAHELETIFDNVRNGSFAVDNRLVELTLAAKDRFQMLVD 103 >UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=CHEA_LISMO Length = 618 Score = 311 bits (797), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 194/639 (30%), Positives = 360/639 (56%), Gaps = 27/639 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EA E L + +LL L+ + + + ++ IFR+AH+ KG + T GF + + Sbjct: 3 TNMLDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSAHTFKGMSATMGFQQVADL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH MEN+LDE R + + ++++ ++ + + + AA L Sbjct: 63 THAMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDIQHGGQG-AADISKTVADLEA 121 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 L L + ET V + +A Q E++ R ++ + E+ ++ E + Sbjct: 122 L-LHPEQETDLTVEKTYRIA---IQIEEAAILKAVRAVMCLERLAEMGIISETTPDREAI 177 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 ++ + S +L +D+I AV+ + E +++T ++ P +K AA+Q Sbjct: 178 -ELEEFEQSFEVVLESAQTKDEIKAVILDISEIEKVTVTEEVEEVQVIEP--IKKAAKQ- 233 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 TT+ E+ +IRV +EK+++L+N+ E VI ++ + + + + N+ +L+ Sbjct: 234 ---------TTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIA---EKTNNKELME 281 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 +G+ ++++Q ++++RM+P++ VF+R+P++VR LA +LGK+++L + G+ TE+DK Sbjct: 282 HLGRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGADTEVDKI 341 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +I+ I DPL HL+RNS+DHG E E R GKN + L A H G N+ IE+ DDGAG+ Sbjct: 342 VIDEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVIEIADDGAGI 401 Query: 426 NRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 N+ ++L KA ++ + S M+D E+ L+F GFSTA+QV+D+SGRGVG+DVV+ I Sbjct: 402 NKRKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGRGVGLDVVRNTI 461 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 K+GG + ++S + G+T RI +PLTL+I+ M V ++ + +PL V E++ AD+ Sbjct: 462 LKIGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLANVAEAITINPADI 521 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + G + ++ R + +++L + F+ + + +++++++ R + L++ +IGQ Sbjct: 522 QHVHGKD-LINYRETIIEVLDLGECFH-ETPLNDTDELLLLVVKNAKRTFGLIIKDIIGQ 579 Query: 603 HQVVVKNLESNYRKVP-GISAATILGDGSVALIVDVSAL 640 ++V+K L + + S ATILGDG V LI+++ Sbjct: 580 REIVLKTLGGFFSESQIAFSGATILGDGRVVLILNLETF 618 >UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Tax=Clostridiales RepID=A6M0J9_CLOB8 Length = 691 Score = 310 bits (794), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 158/379 (41%), Positives = 247/379 (65%), Gaps = 3/379 (0%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 I V V K+D+L++LVGELVI+++M+ ++ E+ + + Q ++ DLQ+ VMS Sbjct: 311 ISVDVNKLDKLMDLVGELVISEAMVT-KNPEISELQLDSFNKAARQHRKRLSDLQDVVMS 369 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IRM+ + ++ R+VRD+ KL K+VEL ++G TE+DK++IE I DPL H+VRNS+D Sbjct: 370 IRMVSLASTLTKMNRIVRDMCKKLNKEVELEIIGQETEVDKNIIEHIGDPLMHIVRNSMD 429 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL-TVS 442 HGIE E+RLA GK S+G + + A++ GG + I + D+G GLN+++IL KA GL V Sbjct: 430 HGIETKEERLANGKPSIGKITIEAKNTGGEVWIIIKDNGKGLNKDKILKKAKDNGLLKVK 489 Query: 443 EN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 EN ++D E+ +IF PGFST E VT+ SGRGVGMDVV I+K+ G V + S G TT Sbjct: 490 ENDLTDREIYSMIFLPGFSTKENVTEFSGRGVGMDVVTNEIEKIRGIVTVDSIPGEETTT 549 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I +PLTLAI+DGM+++V VF +P+ ++ +S ++ D+ ++ +RGE I Sbjct: 550 SIKIPLTLAIIDGMTIKVGKSVFTIPVTSIRQSFIIKKEDIIRDIDNNEMILIRGECYSI 609 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 ++L + +N+ GIV++++ G+ + D+LIG+ QVV+K L +KV IS Sbjct: 610 LKLHEFYNIKTNVVNIEDGIVIMVEDQGKAKCIFADELIGEQQVVIKALPEYIKKVKAIS 669 Query: 622 AATILGDGSVALIVDVSAL 640 ++LGD +++LI+D+S + Sbjct: 670 GCSLLGDATISLILDISEI 688 >UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMH7_CLOCL Length = 671 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 206/669 (30%), Positives = 372/669 (55%), Gaps = 50/669 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 + F E+ +L+ +E ++ + A E +N IFR H+IKG + ++ + + H Sbjct: 12 EMFIFESTQLIDQLENIMIDSEKNAGFSKEHINEIFRIMHTIKGSSAMMMYTHISKLAHS 71 Query: 69 MENLLDEARRG---EMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E+L R M +T ++++ L+ D ++ +L ++ +P + +RQ Sbjct: 72 IEDLFFYIRENNPLHMDYST-LVDVVLKGIDFIKIELTKI-ETNKPVNGDVAILEGEIRQ 129 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQ---SRSQSPRRIILSRLKAGEVDLLEE----- 177 + K + ++ E ++Q +RS+ +R +A V +E Sbjct: 130 YLVNLKNSNNVETVKKNIELIEEVIEQQPLKNRSKVDENFSKNRFEA--VIFFDEGCSME 187 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI--EADQITFETVEVSPKISTP 235 + + + + A+ + P ++ E + C +I E +++F T++ ++ Sbjct: 188 NIRAFSVIHSLKNIAEDIEYT-PKELVE---SKENCEIIKKEGFKVSFATLKSFNEVEDL 243 Query: 236 PVLKLAAEQAPTGRV-------EREK-------------TTRSNESTSIRVAVEKVDQLI 275 +LK A + R+ E EK T ++ + + I V V K+D+L+ Sbjct: 244 -LLKTAVIRKVQLRILEDINQGESEKVNNIHMGLDDKTHTMKNIKQSIINVNVNKIDKLL 302 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 +L+GELVI ++M+ Q + ++ + + L++ + +LQ+ VMSIRM+P+ F + Sbjct: 303 DLMGELVIAEAMVVQ-NPDVQGLQSDSFQKAARLLEKISGELQDVVMSIRMIPVSGTFQK 361 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 R+VRD++ KL K+VEL L+G TE+DK++IE + DPL HL+RNS+DHG+E PE+R+ + Sbjct: 362 MHRVVRDMSKKLNKEVELELIGEETEVDKNIIENLGDPLMHLLRNSIDHGLEGPEERVDS 421 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS--ENMSDDEVAML 453 K +VG ++L A++ GG++ I + DDG G++++++L+KA QGL + ++D ++ Sbjct: 422 NKPTVGKIVLEAKNLGGDVWISIKDDGRGIDKDKVLSKAKEQGLINKPEDQLTDKDIYSF 481 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFST + V++ SGRGVGMDVV+ NI+K+GG + I S +G GT I I +PLTLAI+D Sbjct: 482 IFMPGFSTKDNVSEFSGRGVGMDVVRENIEKIGGKIFIDSSKGRGTHIAIKIPLTLAIVD 541 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 GM++ V + + +P+N + ES + + +L + + VRGE I+ L ++ + Sbjct: 542 GMNIAVGNNRYTIPINLIKESFRLIKENLIIDPHDQEMTIVRGESYKIIRLHQLLKIKPK 601 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES--NYRKVPGISAATILGDGSV 631 T +GI+++++ G+ L D+L+GQ VVVK L + N+R+ IS T+LGDG + Sbjct: 602 NTNIQEGIIIMVEDEGKGVCLFADELLGQQPVVVKALPNYINHRRF--ISGCTLLGDGGI 659 Query: 632 ALIVDVSAL 640 +LI+D+ A+ Sbjct: 660 SLILDIPAI 668 >UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XSL6_PSEMY Length = 739 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 175/392 (44%), Positives = 257/392 (65%), Gaps = 14/392 (3%) Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD--LITSMGQ 309 REK RS EST IRVA K+D+LINLVGELVI+ + ++L HGD + S Sbjct: 334 REK--RSQESTQIRVAAHKLDELINLVGELVISAA-----GAQLRAQAHGDAGCVESTQT 386 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 + ++ ++E+ + +RM+ + F+R+ R+VRD++ +LGK + L + G+ TELDKS+I++ Sbjct: 387 VNQHVEQIREAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLQIRGADTELDKSVIDK 446 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 + DPLTHLVRN++DHGIE E+RLAAGK + G L L+A H+ G I IEV DDG GLN ER Sbjct: 447 LADPLTHLVRNAIDHGIESAEQRLAAGKPAEGQLQLNAYHESGMIVIEVADDGRGLNTER 506 Query: 430 ILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 I KA +GL ++ N+++ ++ L+FA GFSTA+ V+D+SGRGVGMDVV+ I + G Sbjct: 507 IRQKAIDRGLIDAQANLAEPDIHALVFAAGFSTADSVSDLSGRGVGMDVVRSVIDGLRGS 566 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 +EI S G G T RI LPLTLAI+DG + + DE F++PL+ V E L+ L G Sbjct: 567 IEIDSVLGAGCTFRIRLPLTLAIIDGFLISLGDEYFVVPLDMVTECLEMDAEQLGDSTYG 626 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 L +RG+ LP + L F++ ++++ +V++ G ++ L+VD L G+ Q V+K Sbjct: 627 --YLTLRGKPLPCISLAAHFDLPASRSKRRN--IVVVNLGRQQAGLVVDHLHGELQTVIK 682 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L ++ + GI +TILG G VALI+D+ +L Sbjct: 683 PLGLLFQHLQGIGGSTILGSGQVALILDIPSL 714 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/91 (34%), Positives = 50/91 (54%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + F DEA +L+ E++LL L D + +N +FRA H++KG AG F + L Sbjct: 8 SQLLRGFIDEAGDLIKQAEEYLLQLDQTPEDEDAVNGLFRAMHTLKGSAGLFSLTPLVSF 67 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKD 96 TH +E+LL R + ++ +++L L D Sbjct: 68 THHLESLLMSVRDSQRKMEPALVSLMLRCLD 98 >UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6G6_9PLAN Length = 895 Score = 308 bits (790), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 224/646 (34%), Positives = 344/646 (53%), Gaps = 57/646 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F E+ E L ++ ++ L+ + +AE + +IFR H+IKG G G + L Sbjct: 1 MDDILQEFLAESWENLGQLDSEIVELEKDPQNAELIASIFRTIHTIKGTCGFLGLTNLGA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R ++++ I+L LE + D I + L+ Sbjct: 61 VAHSAENVLGKMRERMLEVSPGAISLVLE---------------------AIDRIKELLQ 99 Query: 125 QLALEAKGETPSA-VTRLSVVAKSEPQDEQSR-SQSPRRIILSRLKAGEVDLLEEELGHL 182 LEA GE P + L+++ DE + + +P + + V E++ Sbjct: 100 --GLEATGEEPKTDHSTLTLML-----DELANLATAPLESPPQQPPSAPVSGQVEDISVE 152 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + D G S P DIA+ + + E +T EV + + P L AA Sbjct: 153 NQVEDKPLGGPS-----PTDIADSNES-------EPAALTDSHPEVLAESADP--LTPAA 198 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 G V K + ++ SIRV V VD L+NLVGELV+T++ L Q + + + Sbjct: 199 GGTEEGAVRSSKVSVAD--LSIRVNVNVVDSLMNLVGELVLTRNQLLQLARGDEESKYAA 256 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 IT L R DLQE VM RM P+ +++ PRLVRDL+ K +EL + G+ TEL Sbjct: 257 PIT---HLNRVTTDLQEGVMKTRMQPIGNAWNKLPRLVRDLSQVTNKHIELVMTGAETEL 313 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPLTH+VRNS DHGIE E R AAGK G + L+A H+GG++ IE+ DDG Sbjct: 314 DRTVLDAIKDPLTHMVRNSADHGIESSEVRKAAGKAESGTIHLNAYHEGGHVIIEIQDDG 373 Query: 423 AGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 AG++RER+L KA SQGL + +++D V +IF GFSTAEQV+ +SGRGVGMDVV+ Sbjct: 374 AGISRERVLKKAISQGLIKEVDAPHVTDSHVFSMIFQAGFSTAEQVSSISGRGVGMDVVR 433 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 I+K+GG V++ SK G GTT+RI +PLTLAI+ + + + F +P V+E ++ Sbjct: 434 TQIEKIGGTVDLNSKMGKGTTVRIKIPLTLAIVSALVLESGSQPFAIPQLGVVELVRLSA 493 Query: 540 ADLHPLAG--GERVLEVRGEYLPIVELWKVFNVA--GAKTEATQGI-VVILQSGGRRYAL 594 D + ++V +R LP+V L +V + K + Q +V++Q G ++ L Sbjct: 494 EDCKKIETIHDKKVFRLRDRLLPLVHLNEVLQLEEDTPKDDDLQDTNIVVVQVGEDQFGL 553 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +V ++ ++VVK + + + TILGDG V +I+DV + Sbjct: 554 IVSRIFDTEEIVVKPVGRLLKNIGLYQGTTILGDGRVVMILDVGGI 599 >UniRef50_A5G500 CheA signal transduction histidine kinase n=2 Tax=Geobacter RepID=A5G500_GEOUR Length = 558 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 162/393 (41%), Positives = 256/393 (65%), Gaps = 9/393 (2%) Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-DPVNHGDLITSMGQ----LQR 312 + +S +++V EK+D L+NLVGELVI ++ L ++L + V +I + + + + Sbjct: 156 TQKSNTLKVNFEKLDDLLNLVGELVIQRTTLLAFEAKLKETVKDRAVIEAFSESSQLIGK 215 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +A DL+E++M +RM+P++ VF R+ RLVRDL+ K GK++ L G TELDK++++ I + Sbjct: 216 SAADLREAIMKVRMLPVKVVFQRFNRLVRDLSHKHGKEINLVFEGEETELDKTVVDEIGE 275 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RN++DHGIE P++R GK V + L A H+ ++ + V DDG G++ E++ Sbjct: 276 PLLHLIRNAVDHGIESPDERRMVGKPPVATVALRARHENNHMIVSVEDDGRGISIEKLKN 335 Query: 433 KAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A ++GL + ++D E L+F PGFST+ +VT+ SGRG+G+DVVK + G + Sbjct: 336 SAVAKGLIDHQQARALTDQEALQLVFIPGFSTSREVTETSGRGIGLDVVKNAVTAFNGMI 395 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 +I S G GTT I LPLTLAI+ + V V+ EVF +PL+ V+ES++ +A++H +A GE Sbjct: 396 DIDSMHGAGTTFTIKLPLTLAIIASLMVEVSGEVFAVPLSGVLESIKIDKAEIHQVASGE 455 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 ++ +R LPIV L + F + T VVI+ SG +R ++VD+LIGQ ++V+K Sbjct: 456 -IINLRDRILPIVRLNEFFGLNNTPTTEEMEYVVIVGSGEKRGGIIVDRLIGQQEIVIKA 514 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSALQA 642 ++ +PGIS T+LGDGSVALI+D+ +L Sbjct: 515 MDDYLGPLPGISGGTVLGDGSVALILDIGSLMG 547 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQ----LNAIFRAAHSIKGGAGTF 57 ++D+S F ++A E L E LL+L+ D + + H++KG AG Sbjct: 4 TIDMSVLLDEFLEDAAEHLEAAESSLLLLEKRVNDGLHDEGGVTLLLGNLHTLKGNAGMM 63 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEP 111 G + LQ+ H ME++L + G + L +++ F + ++E L+ K S EP Sbjct: 64 GLTPLQQYVHKMESVLKQVVDGSLSLTSNLFESFYSAINSLRESLEKLAKNSAEP 118 >UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMS0_9DELT Length = 925 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 167/404 (41%), Positives = 261/404 (64%), Gaps = 15/404 (3%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ- 309 E + ++ + +++IRV K+D+L+NL+GEL+I ++ A S L+ G + + Q Sbjct: 521 EPQAKSQGSTTSTIRVDHGKLDELMNLIGELIINRNRFAMLSRSLE---EGQDVMEVAQQ 577 Query: 310 -------LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + R + DLQ ++M++RM+P+ VF+++PRLVRDL+ K K ++L G TEL Sbjct: 578 LNETTNSMARISDDLQVTIMNVRMVPVRSVFTKFPRLVRDLSRKNNKNIQLITEGEETEL 637 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DKS++E I DPL HL+RN++DHG+ELP++R GK G + L A H+G ++ IE+ DDG Sbjct: 638 DKSVVELIGDPLVHLIRNAVDHGLELPQERKDRGKEEKGTVWLRAAHKGNSVVIEIEDDG 697 Query: 423 AGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ E++ AKA +G+ E NM +D+ LIFAPGFSTAE +TDVSGRGVGMDVVK Sbjct: 698 KGIDPEKMKAKAVEKGIIDREEARNMEEDQAVDLIFAPGFSTAETITDVSGRGVGMDVVK 757 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 NI+ + G++ + S G GT I LPLTLAI+D + V+V +V+ +PL+AV E+ + + Sbjct: 758 NNIKSLKGNISVTSAVGQGTRFSIALPLTLAIIDALMVKVNGQVYAIPLDAVSETTKIQA 817 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 L+ + +V+ +RGE L I +L ++ + + + + +VI++ G RR +V+ L Sbjct: 818 GRLNEI-NNRKVITLRGEVLGISDLAELLELPVDQADRDELPLVIIKVGDRRMGFIVEDL 876 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 + + +VV+K+L PGIS ATI+GDGSV LI+D + + I Sbjct: 877 LERQEVVIKSLGEYLGDQPGISGATIMGDGSVVLILDPNEIYRI 920 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 3/150 (2%) Query: 1 MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D D Y F EA E L +E LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPEVYSDFVVEAREHLETIEPKLLELENNPGNLSLLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + H EN+LDE R+G +Q N+ I++L LE D ++ +D + + + Sbjct: 61 LKDMNALAHKGENILDELRQGRIQANSSIMDLILEATDALRTMVDNLESMGHEGSLEVGH 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSE 148 I + + ++ L+ K E S+ V K E Sbjct: 121 IIEHIDEI-LKNKDEQASSGAPAQEVQKEE 149 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 1/94 (1%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQP-EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F +EA E L + LL ++ E +++N +FR H++KG +G G+ L Sbjct: 169 DHLSDFIEEAQENLTAINSLLLEMEKGEGSSQDRINDLFRNFHNLKGNSGIIGYIELNAL 228 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 H +E L+ R GE L+ + +++ LET D+++ Sbjct: 229 AHEVETFLNTIRSGEQVLDPEAVDVLLETVDVLE 262 >UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEH2_CHRVI Length = 735 Score = 308 bits (788), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 174/418 (41%), Positives = 268/418 (64%), Gaps = 16/418 (3%) Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS---MLAQR 291 P V++ AA R R++ TR IRV +++ LI+L+GELV + + +L +R Sbjct: 320 PAVVEQAARTQEAARARRQEETRF-----IRVDAQRLGHLIDLIGELVTSSAAIRVLVKR 374 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + ++ +N +++ + L RD + + +RM+P+ SR+ R+VRD + +LGK++ Sbjct: 375 AG-IEDMN--EVVDGVDYLVAEIRD---NALQLRMVPIGESLSRFKRVVRDASRELGKEI 428 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 EL + G TELDK+++E++IDPLTHL+RN++DHGIE PE R A GK + G + ++A H Sbjct: 429 ELVITGGETELDKTVVEKMIDPLTHLIRNAVDHGIETPEVRRARGKPAQGTVRINAYHDS 488 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSG 470 G+I +E+ DDGAGLN ERI AKA + GL E+ ++ +E LIFAPG ST EQ T++SG Sbjct: 489 GHIVVEIADDGAGLNVERIRAKAEAAGLVKPEDVLTREETLRLIFAPGLSTKEQATNLSG 548 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVV+RNI+ + G VE+ S+ G GT + I+LPLTLAI+DG V + +++PL Sbjct: 549 RGVGMDVVRRNIEALRGTVELDSRLGEGTQVTIVLPLTLAIIDGFLVGAGPDQYVIPLAQ 608 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 V E ++ +A+ GE + +RGE LP + L +F AG + + +V+++ G Sbjct: 609 VAECVE-MDAERSARQQGEHYINLRGEVLPFIRLTDLFENAGIQQGPRRESLVVVRFGHH 667 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 + L+VD L+G+ Q V+K L + ++ G++ ATILG G +ALI+DV+ L AI QR Sbjct: 668 KMGLVVDTLLGELQTVIKPLGKVFERLRGVAGATILGTGDIALILDVAELAAIAEGQR 725 Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 61/111 (54%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ Q+F E ELL ME LL L+ + D E LNA+FRA H+IKG G FG+ + Sbjct: 1 MNLDSARQSFLAEVAELLQSMEDALLALEDDPDDPESLNAVFRAMHTIKGTGGVFGYEAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA 113 E TH +E L+D R G++ L +I LE +D +DA + PD Sbjct: 61 VEFTHTVETLMDRVRSGQVPLTRPLIATLLECRDHTARLVDAIVAASVPDG 111 >UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales RepID=C2KYL0_9FIRM Length = 693 Score = 308 bits (788), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 217/683 (31%), Positives = 356/683 (52%), Gaps = 66/683 (9%) Query: 18 ELLADMEQHLLVLQPEAPD--AEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 E L D +L+ + D + +N IFR H+IKG + F+ L H +E++ Sbjct: 17 EALLDKLDEMLIADEKVGDFSTDDVNEIFRIMHTIKGSSAMMEFTPLSNIAHHIEDMFFF 76 Query: 76 AR-RGEMQLNTD----IINLFLETKDIMQEQLDAYKQSQEPDAASFDY---ICQALRQLA 127 R +G L+ D + +L ++D ++ L+ K +E D ++ I L +++ Sbjct: 77 IRDKGIDSLSGDQKSELFDLMFRSEDFLRSGLEKVKAGEELDNNVEEFAGSINAFLAKIS 136 Query: 128 LEAKGETPSAV-----TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 +A ++ V T+ S ++ P+D++++ + I L G + E Sbjct: 137 GKAPADSAPVVEAADSTKASGENRNLPKDDKAK-----KFIHVFLDEG----IGMENLRA 187 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITA--------VLCFVIEADQ-------------I 221 + + +K D P D+ + TA L F + D + Sbjct: 188 FMIVNAIKEFDLEFRYYPADMDSNPETAQTIIDEGFFLAFDSDEDCEKGEKILREQSHIL 247 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN----------ESTSIRVAVEKV 271 ++E VE + + V AE + + +E + + I V ++K+ Sbjct: 248 SYEPVEATKAEAKAEVKSANAESSSAPKASKEPAAAQQTAQQKAAAPVKQSLISVNLQKL 307 Query: 272 DQLINLVGELVITQSMLAQRS--SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 D L +LVGE+VIT+SM+ L + + + S QL++ DLQ+ MS+RM+ + Sbjct: 308 DSLNDLVGEIVITESMVTSSPVLRMLPQESLDNFMKSARQLRKLTDDLQDIAMSLRMVSI 367 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-L 388 VF + R+VRD+ KLGK V+LT++G TE+DK++++ I DPL H+VRNS+DHGIE Sbjct: 368 SGVFQKMNRIVRDMKQKLGKDVKLTIIGEDTEVDKTIVDSIQDPLMHIVRNSMDHGIEET 427 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS--ENMS 446 E+R+AAGK+S G LILSA H + I V DDG G++ E++L KA +G+ S Sbjct: 428 KEERIAAGKDSQGELILSASHTSSEVIITVQDDGYGMDPEKLLDKAEEKGILYKPRSEYS 487 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 E LI PGFST VT+ SGRGVGMDVVK+N++ +GG + I S+ G G+T + +P Sbjct: 488 KKEALGLIMLPGFSTNTAVTEFSGRGVGMDVVKKNLESVGGTISISSEIGKGSTFTMKIP 547 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LTLAI+DGM V V D +F +P+ + +S + ++++ G +++ + PI+ L Sbjct: 548 LTLAIMDGMKVNVGDTIFTIPIVNIRQSFKVDDSEVVFDENGNEMVKRMDVFYPIIRLNN 607 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR----KVPGISA 622 + + G T+ G+++ +++G + L VD LIG+ QVVVK L + + K GI+ Sbjct: 608 FYGIEGKYTDLQDGVLIWVEAGDKSCCLFVDDLIGEQQVVVKPLPAYFNAYDLKSSGING 667 Query: 623 ATILGDGSVALIVDVSAL--QAI 643 +ILGDG++ +I+DV L QAI Sbjct: 668 CSILGDGNICIILDVLGLYSQAI 690 >UniRef50_C6HWL4 Putative signal transduction histidine kinase (CheA) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWL4_9BACT Length = 671 Score = 307 bits (787), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 163/388 (42%), Positives = 256/388 (65%), Gaps = 11/388 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV-----NHGDLITSMGQLQRNARDL 317 +IRV + ++D ++NLVGELV+ ++ L + S ++D V ++ ++ QL R DL Sbjct: 257 TIRVEISRLDSVMNLVGELVLGRNRLVKLSGDVDGVVDFEQRIKEVAEAISQLNRVTTDL 316 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q +V+ RM P++ V ++PR+VRDL+ K+GK + L LVG TELDKS+IE I DPL H+ Sbjct: 317 QTAVIKTRMQPIKKVLGKFPRMVRDLSRKMGKSIRLELVGEETELDKSVIEEIGDPLVHI 376 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RNS+DHGIELP+ R++ GK+ G + +SA +G +I IE+ DDG G++ E++ KA + Sbjct: 377 IRNSIDHGIELPDDRVSHGKDPEGVVRISAYQEGNSIVIEINDDGRGIDVEKVKRKAVER 436 Query: 438 GLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 G+ E+ M+D E +IF PGFSTA++VTDVSGRGVGMDVV+ NI K+ G V++ ++ Sbjct: 437 GIITEEDSRRMTDAEAVNIIFLPGFSTADKVTDVSGRGVGMDVVRTNISKINGSVDVTTQ 496 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 +G+G+T I LPLT+AI+ + V + E + +PL +V+E+++ E D+ ++G E VL + Sbjct: 497 KGSGSTFTIRLPLTIAIIQALMVTIHPETYAIPLASVVETVKITEKDIKTISGSE-VLNL 555 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQ--GIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R + LP++ L F V +T VV++Q G + L+VD+L Q +VV+K++ Sbjct: 556 RQQVLPLIRLRDEFKVPQEETGGAPPGSYVVVVQIGSKNLGLVVDRLPYQEEVVIKSMGP 615 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + G++ ATI GDG V +I+DV + Sbjct: 616 LLAGIRGLAGATITGDGKVVIILDVGEI 643 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 36/109 (33%), Positives = 59/109 (54%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + Q F EA E+L ++ + L+ D LN IFR AHSIKG AG G + + Sbjct: 9 EMKEIVQDFLQEATEMLEGLDNFFVQLENNPEDKTLLNEIFRTAHSIKGSAGFIGLTRIV 68 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD 112 E H EN+L++ R G M+ +I++ LE D ++ ++ K ++ D Sbjct: 69 EVAHHAENVLNQLRSGNMRAEPAVIDIILEAMDALKVLVNEVKTGEQAD 117 >UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA26_9FIRM Length = 690 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 173/417 (41%), Positives = 260/417 (62%), Gaps = 14/417 (3%) Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 ++A AP KT +S + V K+DQL++LVGELV T+SM+ + +L + Sbjct: 280 VSASSAPKPSDALPKTKQS----LVSVNQAKLDQLMDLVGELVTTESMVVS-NPDLKGLR 334 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 + S +L + +LQ+ VMSIRM+P+ VF + R+VRD++ KL KQVEL G Sbjct: 335 LDNFNKSTRELHKLTDELQDVVMSIRMVPLSGVFQKMNRIVRDMSKKLDKQVELVTEGGD 394 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TE+DK++ E I DP H++RNS+DHGIE E+R A GK +G + + A++ G I I + Sbjct: 395 TEVDKTINEAIGDPFMHMIRNSMDHGIEPIEERRAKGKPDIGRITMIAKNIGSEIVITIA 454 Query: 420 DDGAGLNRERILAKAASQGLTVS--ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDGAGLN E +L KA GL ++ E+ LI PGFST ++VT+ SGRGVGMDV Sbjct: 455 DDGAGLNPEVLLRKARENGLLTKPESEYTEKEIFGLIMLPGFSTNKEVTEFSGRGVGMDV 514 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V++NI+K+GG + I S++ GTT I +PLTLAI+DGM + + ++ LP+ ++ +S + Sbjct: 515 VRKNIEKVGGTLSIDSERDKGTTFIIKIPLTLAIVDGMELEIGSTIYTLPIASITQSFKI 574 Query: 538 READ--LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALL 595 + LH G E ++ +RGE P++ L ++F+V TE GIV+++++G L Sbjct: 575 YDNSQILHNTDGTEMIM-LRGECFPLIRLHRLFDVETQITELGDGIVILIENGTSAACLF 633 Query: 596 VDQLIGQHQVVVKNLESNYRKVP----GISAATILGDGSVALIVDVSALQAINREQR 648 D+L+G+ QVVVK + K G+S TILGDGS++LI+D +AL +N+E+R Sbjct: 634 ADKLLGEQQVVVKPFPTFLNKYAIKQIGLSGCTILGDGSISLILDANALLNLNKERR 690 >UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKK5_ANATD Length = 633 Score = 306 bits (785), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 214/657 (32%), Positives = 359/657 (54%), Gaps = 61/657 (9%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 ++ F EA E+++ +E+ + L+ + + + R H++KG + GF + + H Sbjct: 10 FEVFISEAKEIVSSLERIFIELKEGNRNLDIAVAEALRFFHTLKGSSAMMGFDDISKICH 69 Query: 68 LMENLLDEAR-RGEMQLNTD--IINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E++ R G++ N D I+N+ L+ D + Q++ + SQ+P A + I + L Sbjct: 70 RVEDIFVCMRDEGKLPTNLDNFILNM-LKLIDFLTIQINCIENSQQPQDA--ENIKEVLE 126 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 ++ ET A E Q+ S+ I L + E++ L L Sbjct: 127 KI------ETSLA----------ENNRVQAESEKKYHIRLLFEEGWEMENLRAFL----- 165 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK--ISTPPVLKLAA 242 + +K ++ LP DI + + +++I + +S K + V+KL Sbjct: 166 IVQNLKQYVNVLEYLPSDIESN--------MASSEKIKKDGFFISIKTLLKKEDVVKLFE 217 Query: 243 EQAPTGRVE----REKTTRSNESTS-----------IRVAVEKVDQLINLVGELVITQSM 287 A ++ EK + + E +S I V +EKVD+LI+L+GE+VIT SM Sbjct: 218 NFAWVKDIKIEEVSEKASLTKEISSYQNVTHSIHKLINVNIEKVDRLIDLIGEVVITFSM 277 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 + Q E+ + Q+ + R+LQE VMS+RM+P+ F R R + +++ KL Sbjct: 278 IVQHK-EVKTDENSSFKNLTLQMSKLIRELQEVVMSMRMLPLSSTFQRLKRTIIEMSAKL 336 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 K V + + G TELDK LIE + DPL HLVRN++DHGIE E+RL GK+ GN+ +SA Sbjct: 337 QKPVNVHITGEETELDKVLIEHLTDPLIHLVRNAVDHGIEDKEERLKKGKDMTGNVYISA 396 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVT 466 ++ G + I + DDG GLN+E+IL KA +GL S +++ +DE+ LIF PGFST E+ T Sbjct: 397 KNSGSEVVISIEDDGRGLNKEKILQKAFERGLITSPDDIIEDEIFELIFQPGFSTKEEAT 456 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 + SGRGVG+D+VK ++QK+GG + ++S++ GT I +PLTLAI+DGM + V +F++ Sbjct: 457 EYSGRGVGLDIVKNSVQKIGGRIFVESEKDRGTRFTIRIPLTLAIIDGMLIDVDGNIFVV 516 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF---NVAGAKTEATQGIVV 583 PL++++E+ + + + L + RG +++L K+F ++ + GI+V Sbjct: 517 PLSSIVETFKLEKQQI-VLENEIPFVYRRGICFGVIDLNKMFYGKDILDKERPFYLGILV 575 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +G + LLVD +I Q Q+V+K L + ++V GIS T++G G++A I+D+ AL Sbjct: 576 --TNGEKNGVLLVDNMISQQQIVIKTLPAILKQVRGISGCTLIGSGNIAFILDIDAL 630 >UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 Tax=Bacteria RepID=A1VCL0_DESVV Length = 1089 Score = 306 bits (784), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 172/387 (44%), Positives = 255/387 (65%), Gaps = 13/387 (3%) Query: 261 STSIRVAVEKVDQLINLVGELVITQ---SMLAQRSSELDP-VNHGDLITSMGQ----LQR 312 S++IRV EK+D L+NL+GEL+I + SMLA+ E VN ++ ++ + + R Sbjct: 692 SSTIRVDHEKLDHLMNLIGELIINRNRYSMLARHLEEGGASVNVAEVAQNLSETTYAMAR 751 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L L G TELDKS++E I D Sbjct: 752 ISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVLEGEETELDKSVVEVIGD 811 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RNS+DHG+E E+R+A GK G + L A H+G ++ IE+ DDG G++ E++ Sbjct: 812 PLVHLIRNSVDHGVEPEEERIAKGKKPKGVVTLRAFHKGNSVAIEIEDDGKGIDPEKMRE 871 Query: 433 KAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A +G+ E M D E LIFAPGFS+AE++TD+SGRGVGMDVV+ NI+ + G V Sbjct: 872 VAVRKGIVTPEEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSV 931 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 I S+ G GT + LPLTLAI+D + V VA +++ +PL+AV E+ + L + G Sbjct: 932 SIHSEVGKGTRFTLSLPLTLAIIDALMVNVAGQMYAIPLDAVSETTKIEARRLTDVK-GR 990 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 + + +RGE L IV+L ++ + + + +VVI RR L+VD+L+ + ++V+K Sbjct: 991 KAVTLRGEVLGIVDLSELLALPRSDAQDVLSVVVI-HDNDRRLGLVVDRLLERQEIVIKP 1049 Query: 610 LESNYRKVPGISAATILGDGSVALIVD 636 L + + GIS ATI+GDGSV LI+D Sbjct: 1050 LGAYLGDLKGISGATIMGDGSVILILD 1076 Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 1/109 (0%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F EA E L +E +LL L+ + LN IFR HS+KG +G G + + + Sbjct: 9 EIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRMNQLA 68 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-QEPDAA 114 H EN+LDE R+G M + ++I+++ L D +++ +D + S QE D A Sbjct: 69 HRAENILDELRKGAMVVTSEIMDVILAVTDALRQMIDNLESSGQEGDVA 117 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 12/152 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQ--PEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DEA E+ + LL L+ P+ D +++N +FR H++KG +G GF L TH Sbjct: 247 KDFIDEAREMTEQLGTGLLELERHPDEKD-DRVNDLFRFFHNLKGNSGIIGFRELNGLTH 305 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA---SFDY--ICQA 122 E LL+ RRGEMQ + ++++L L D+ +DA E + FD + + Sbjct: 306 EAETLLNNIRRGEMQSSAELVDLLLFVVDV----IDALVNRIETASGMVHGFDISEVLEP 361 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQS 154 L+Q + P + ++ A S+P E + Sbjct: 362 LQQAVAGGEARLPVGIVGMAKQAASQPAAEST 393 >UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NX21_HALMD Length = 649 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 212/656 (32%), Positives = 337/656 (51%), Gaps = 34/656 (5%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F E++E + ++ LL L+ + D E + +IFR AH++KG G GF H Sbjct: 5 YLDAFIRESEEAITELNNSLLDLESDPEDTEAMESIFRTAHTLKGNFGAMGFDDASSLAH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E+LLDE R G M + D+++L D ++ + ++ E D I LR + Sbjct: 65 AIEDLLDEMRDGNMPVTPDVMDLIFAGVDKIEAIVSEIEEHGES-GTDVDEIVDDLRTVL 123 Query: 128 LEA-------------KGETPSAVTRLSVVAKSEPQDEQSRS--QSPRRIILSRLKAGEV 172 E E P T + E + S + II + + G+ Sbjct: 124 EEGVDAAEGAADDADGPDEAPDDTTDTDSSGDGDVAVETNVSPDTADDSIIAAEIDIGDS 183 Query: 173 DLLEEE----LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 D+L + + + DV+ A A+ G+ ++ T L E T+ Sbjct: 184 DMLGVDAMLAIEAVEDYFDVLDAAPQREAVEDGEFSD---TFTLYLDAEDTGTVDNTLSG 240 Query: 229 SPKISTPPVLKLA-AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 KI + + A +G E + +E S+RV V+++D L LV +LV ++ Sbjct: 241 IGKIESAETADVTDALSEKSGSTSDETEHKVDEIKSVRVDVDQLDDLHGLVEQLVTSRIK 300 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 L +R+ E D ++ ++ +L + +LQ +VM +R++P++ V ++PRLVRDL+ L Sbjct: 301 L-RRAVEQDDLDGAG--ENLNELDKITANLQNTVMDMRLIPLKKVVGKFPRLVRDLSRDL 357 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK+V+ + G ELD++++ I DPL H++RNS+DHGIE PE R GK G + L A Sbjct: 358 GKEVDFEIEGEDIELDRTILTEISDPLMHILRNSVDHGIEPPEVREEKGKPRTGTVELRA 417 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQ 464 + ++ I+V DDGAGL+ E I KA +G+ E M D + L+F PGFSTA+Q Sbjct: 418 SRERDHVIIQVEDDGAGLDVEAIRDKAIEKGVRSPEELEAMDDSSIYDLVFHPGFSTADQ 477 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 VTD SGRGVGMDVV + ++ G V ++S G GTT+ + LP+T+AI+ + V V DE + Sbjct: 478 VTDTSGRGVGMDVVHDTVTQLDGSVNVESTPGEGTTVSLRLPVTMAIVKVLFVEVGDEEY 537 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 +PL V E + AD G+ V++ E PI++L + F+ G +T G++V Sbjct: 538 GIPLKNVDEITR---ADDRKQVNGKDVIKHNDEIYPIIQLGETFDAPG-ETANGDGMLVR 593 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++ R+ AL D + Q +VVVK LE PG+S +LGDG++ I+DV L Sbjct: 594 VRESERQVALHCDSVNSQEEVVVKPLEGILSGTPGLSGTAVLGDGNIVHILDVVTL 649 >UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 Tax=Oscillatoriales RepID=Q10WZ9_TRIEI Length = 801 Score = 306 bits (783), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 210/670 (31%), Positives = 354/670 (52%), Gaps = 84/670 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M M+I + Q F ++ E + +E L+ L+ + + E + I+R+ H++KG +G G Sbjct: 1 MKMEIDEDIQAFLIDSYETINKLESDLVALEKHSINPELIQCIYRSLHTLKGNSGFLGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 LQ H ENLL + G + + +I+N+ L+ D +++ L + + + +++ + Sbjct: 61 TLQSLAHAGENLLACLQDGRIIITPEIMNVLLQAIDGIKQILYCLETTGKQGDYNYNSLL 120 Query: 121 QALRQLALEAKGETPSAVTRLSV-VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L ++ + +T A T +S+ S PQ E+ + S LS A + +EE+ Sbjct: 121 KNLA--SITSSEQTEKAQTEVSLDYEDSWPQLEKVDNSSQN---LSTTDAQQTAFVEEQ- 174 Query: 180 GHLTTLTDVVKGADSLSAILP--GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 L T+ + +S+ LP G+++ED +T L Sbjct: 175 -ALPEKTEQLLNTSEISSTLPLSGNLSEDILTTNL------------------------- 208 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS-MLAQRSSELD 296 T S IRV V+ ++QL+NLVGELV+ ++ +L + + D Sbjct: 209 ------------------TASISGNYIRVDVQLLNQLMNLVGELVLCRNQVLVFNNRQTD 250 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 V GD + +L +LQE +M + P+ +++++PR+VRDL+ LGK++ L + Sbjct: 251 SV-FGD---TSQRLDLITTELQEGLMKTLLQPIRKIWNKFPRVVRDLSLSLGKEINLEME 306 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TELDK+LIE I DPLTHLVRN +DHGIE P+ R++ GK +G L L A H+ G + I Sbjct: 307 GEETELDKTLIEAISDPLTHLVRNCVDHGIEHPDIRISKGKPPIGRLWLRAFHESGYVNI 366 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 E+ DDG G++ +RI AKA + + E +++++E LIF PGFSTA ++T++SGRG+ Sbjct: 367 EIGDDGRGIDIKRIKAKALQRHIITHEQASSLTENEAYNLIFIPGFSTAPKITNISGRGI 426 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVV+ NI+K+ G + I S+ G GTT ++ +PLTLAI+ + V + + +P +++E Sbjct: 427 GMDVVRNNIEKISGTINISSQLGQGTTFKLKIPLTLAIIPTLIVTTNGDRYAIPQVSLLE 486 Query: 534 SLQPREADLHP---LAGGERVLEVRGEYLPIVELWKVFNVAGAK-------TEATQGI-- 581 ++ D + G + +RG LP+V L V + K T +G+ Sbjct: 487 LVRLEGKDAKKKVEMVHGAPIYRLRGNLLPLVYLDNVLQLEANKSHRYPLATPWLEGVSL 546 Query: 582 -----------VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 +V++Q+ + + L+VD + ++VVK L +K+ + ATI+GDG Sbjct: 547 KGQSDNLDILNIVVVQAAHQSFGLVVDAINDTQEIVVKPLGRQLKKISCFAGATIMGDGK 606 Query: 631 VALIVDVSAL 640 VALI+D+ L Sbjct: 607 VALILDIQGL 616 >UniRef50_D2QXS7 CheA signal transduction histidine kinase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QXS7_9PLAN Length = 895 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 180/417 (43%), Positives = 262/417 (62%), Gaps = 29/417 (6%) Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A +P + + S +SIRV V +D+L+N VGELV+ ++ + Q +S N G Sbjct: 322 AASSPMEEAASKPSGASVAESSIRVDVALLDRLMNCVGELVLARNQILQLTS-----NTG 376 Query: 302 D--LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 D +++ +L +LQE VM RM P+ +S++PR+VRDLA + GK+VEL + G Sbjct: 377 DRNFLSASQRLNLITSELQEGVMKTRMQPIGNAWSKFPRVVRDLAAQCGKRVELVMEGRE 436 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDK++IE I DPLTHLVRNS+DHGIE +RLAAGK + G + L A H+GG + IEVT Sbjct: 437 TELDKTIIEAIKDPLTHLVRNSVDHGIEPSAERLAAGKPAEGTVTLRAFHEGGQVIIEVT 496 Query: 420 DDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG GLN RI AKA +GL + +SD + A LIF PGFSTAE+VT VSGRGVGMD Sbjct: 497 DDGRGLNFPRIRAKALERGLITESQAAQLSDHDTAPLIFLPGFSTAEKVTHVSGRGVGMD 556 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK NI+++GGH++IQS+ G+ TT++I +PLTLAI+ + V + F +P +++E + Sbjct: 557 VVKTNIERIGGHIDIQSQTGSSTTMKITIPLTLAIIPALIVSAEGDRFAIPQQSLVELVH 616 Query: 537 PREADLHPLAGGER-----VLEVRGEYLPIVELWKV--------FNVAGAKTEATQGIVV 583 ++D + ER V +RG+ LP+V L + ++ AGA + VV Sbjct: 617 ISKSDSSRMI--ERIHHAPVYRLRGKLLPLVSLRSLLQLPERPEWDRAGAHDLS----VV 670 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +L++ ++ L+VD + ++VVK L + + + + AT++GDG VALI+DV L Sbjct: 671 VLKANDSQFGLVVDTISDTEEIVVKPLSRHLQNLTMYAGATVMGDGRVALILDVLGL 727 Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 29/94 (30%), Positives = 49/94 (52%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D + F E+ E + +E L +L + + + ++FR+ H++KG AG G+ L+ Sbjct: 169 DAIRDFLLESHENIDQIEHELQLLDRGTHNDQTIRSVFRSVHTMKGAAGFLGYKNLENVA 228 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 H ENLL + R G++Q N I T D+ +E Sbjct: 229 HACENLLGQLRSGKLQWNATISAALSSTIDLFRE 262 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 3/100 (3%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDA--EQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 F E+ E LA +E LL ++ + + E +N +FRA HSIKG AG + E H + Sbjct: 15 FVAESLEHLAQVENDLLSIESASTSSRTEIVNNVFRAVHSIKGAAGFLALHRINELAHAL 74 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQL-DAYKQS 108 E +L R G+++ ++ + ++ L D ++ L D + Q+ Sbjct: 75 EEVLGALRDGKVESSSKLTDITLRAIDKLKSMLSDVHHQA 114 >UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD11_9GAMM Length = 764 Score = 305 bits (780), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 169/413 (40%), Positives = 247/413 (59%), Gaps = 4/413 (0%) Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 EQ R +++ +S +IRV K+ QLINLVGELV + + + + + Sbjct: 343 EQPVIERALKKQQKSREQSQTIRVDSNKLGQLINLVGELVTSSAAMKIVVERYHMRDADE 402 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 ++ M L RD + +RM+ + FSR+ R+ RD++ +LGK+++L + G +EL Sbjct: 403 VVAGMEHLVEEIRD---HALQLRMVQIGDTFSRFRRVTRDVSNELGKKIDLVISGGESEL 459 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK+++E+I DPLTHLVRN+LDHGIELP +RLAAGK G + L+A H G+I IEV DDG Sbjct: 460 DKTVVEKINDPLTHLVRNALDHGIELPSERLAAGKPEAGTITLNAFHDSGHIVIEVIDDG 519 Query: 423 AGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL+ E+I AKA GL +S E+ L+F PG ST EQ +++SGRGVGMDVV+RN Sbjct: 520 RGLDPEKIQAKAEKVGLIEPGVTLSRAEIFRLVFEPGLSTKEQASNLSGRGVGMDVVRRN 579 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+ + G VE+ S G GT I I LPLTLAI+DG V E +++PL+ V E ++ D Sbjct: 580 IEALRGSVELDSNVGKGTHITINLPLTLAIIDGFMVGAGHERYVIPLSMVEECVEFNNGD 639 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + G + +RGE +P V L F V + + +V+++ G + +VDQL G Sbjct: 640 WYEEKGQSNFINLRGEVMPFVRLRTFFQVPQRQQRQHRESLVVVRMGRHKAGFVVDQLFG 699 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + Q V+K L ++ + G+S ATILG G +ALI+DV L + Q ++ A Sbjct: 700 EQQTVIKPLGDIFQHLKGVSGATILGTGDIALILDVQGLLTLAGNQHAHHSQA 752 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 57/88 (64%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 + F EA+ELL +ME LL L+ + + E +N++FRA H+IKG AG F F+ + E TH Sbjct: 7 HHIFQTEAEELLVEMEDALLALEDDPTNQELVNSLFRAMHTIKGAAGVFNFNHITEFTHP 66 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKD 96 +E +D R+G+ +++++I L+ KD Sbjct: 67 VETEVDLIRQGQRTVDSNLIATLLKIKD 94 >UniRef50_C7LPE3 CheA signal transduction histidine kinase n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LPE3_DESBD Length = 1063 Score = 304 bits (779), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 180/420 (42%), Positives = 263/420 (62%), Gaps = 35/420 (8%) Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ-L 310 R + ++ S+RV V ++ L+NL GELV++++ L Q S N I GQ + Sbjct: 343 RAPKSAISQPDSLRVHVSLLEDLMNLAGELVLSRNQLMQAISS----NAIHQIEVAGQRI 398 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 +LQE++M RM + +F+++PR+VRDLA LGK+++L L G+ ELDK++IE + Sbjct: 399 DLVTSELQETIMLTRMQTVGNIFNKFPRVVRDLARTLGKEIDLQLEGNDVELDKTIIEGL 458 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPLTHLVRNS DHGIE+P+ R AGK ++G ++L A H+ G + IE+ DDG GL+ ++I Sbjct: 459 GDPLTHLVRNSADHGIEMPDVRARAGKPALGTIVLKAYHEAGQVIIEIVDDGGGLDTDKI 518 Query: 431 LAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 +AKA S+GL +++MSD E A LIF PG STAEQVTDVSGRGVGMDVVK N+ ++GG Sbjct: 519 VAKALSRGLITPDQAKSMSDKEKANLIFLPGLSTAEQVTDVSGRGVGMDVVKSNLDQLGG 578 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PRE--ADLHP 544 V+I++++G GTTIRI LPLTLAI+ + V V E + +P V E L+ P + + Sbjct: 579 QVDIETERGKGTTIRIKLPLTLAIIPSLLVSVGQERYAIPQVNVDELLRIPVDQITERVE 638 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI----------------------- 581 L G VL +RGE +P++ L V + EA++ + Sbjct: 639 LVGDAEVLLLRGELIPLLYLSNVLGLDDNSCEASKMVGEILRGEKRLDEVQEAGCISADV 698 Query: 582 -VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +V++ +G RY L+VDQL ++VVK L ++++ G + ATI+GDG VALI+DV+ L Sbjct: 699 NLVVVSAGQFRYGLVVDQLHDSVEIVVKPLGRHFKECQGYAGATIMGDGHVALILDVAGL 758 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 26/234 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPD--AEQLNAIFRAAHSIKGGAGTFG 58 M MD + Q + +EA E L D+E LL ++ D E +N +FRAAHSIKGGAG G Sbjct: 1 MMMD-DETLQMYVEEAAEHLGDIENDLLAIEQAGADIDVELVNKVFRAAHSIKGGAGFLG 59 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + +++ H +EN+LD R E+ +++N+ L D +++ + +S DA D+ Sbjct: 60 LTKIKDLGHKIENILDMVRNRELVPEPEVVNIVLLAFDKLRDLISNVAESN--DAYIDDH 117 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR--SQSPRRIILSRLKAG------ 170 + + +GE ++V RL E +D + R + +L K G Sbjct: 118 VAALTAAASANLEGEEKASVDRL-----VEVKDRRGRVVFEVAEFDLLQNKKGGKNLYLL 172 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILP--------GDIAEDDITAVLCFVI 216 E DL+ + T+ D++KG DS IL G + +DD + + F + Sbjct: 173 EFDLIHDVQRKNKTIFDILKGMDSTGVILDLKVDFEAVGTLEDDDFSNRIPFFV 226 Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust. Identities = 33/94 (35%), Positives = 48/94 (51%), Gaps = 3/94 (3%) Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 GG RV++ RG LP+ L + NV G + IV++ G LL + + Sbjct: 823 GGRRVIKYRGGTLPVFSLDQATNV-GLLDLTGELIVIVFLMAGHEIGLLAKPPVDAIEAR 881 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V NL+S K PGIS + ++GD + LIVD+ L Sbjct: 882 V-NLDSFTLKQPGISGSAVIGDNT-TLIVDIYEL 913 >UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile RepID=C9XKI0_CLODC Length = 710 Score = 303 bits (776), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 157/384 (40%), Positives = 248/384 (64%), Gaps = 12/384 (3%) Query: 266 VAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 V +EK+D L N+VGE+VI +SM+ S+ +D N + QL + +LQ+ VMS Sbjct: 326 VNLEKLDLLQNIVGEIVIMESMVVNSVNSTGVDIDNFN---KATRQLHKLTDELQDIVMS 382 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM+ + VF + R+VRD+ KL K VEL +G+ TE+DK++I+ + +P HL+RN++D Sbjct: 383 MRMIQIAGVFQKMHRIVRDMNKKLDKNVELITIGAETEVDKNVIDNLAEPFMHLIRNAMD 442 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 H IE E+R+A GK VG ++LSAE+ GG I ++DDG G+ R++ILAKA QGL + Sbjct: 443 HAIEPIEERIAKGKEEVGKIVLSAENLGGEAVISISDDGRGIMRDKILAKAKEQGLLKHQ 502 Query: 444 --NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 +DDEV LI PGFST E +T+ SGRGVGMD+V+++I+K+GG +E++SKQ GTT Sbjct: 503 INEYTDDEVNSLIMTPGFSTKESITEFSGRGVGMDIVRKSIEKVGGSIEVKSKQDEGTTF 562 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE-RVLEVRGEYLP 560 I +PLTL+I++GM +V D +F LP++++ + + + + G + ++ + G +P Sbjct: 563 TIKIPLTLSIVEGMKFKVGDSLFTLPISSIRRTFKLTDLNQIITEGNKTELITIYGACIP 622 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR----K 616 I+ L K++N+ T G ++I+++ + + VD++IG QVVVK + K Sbjct: 623 IIRLHKIYNIQTKVTNLMHGNMIIIENEHKAVCIFVDEIIGNQQVVVKPFPVYFNRFNIK 682 Query: 617 VPGISAATILGDGSVALIVDVSAL 640 G+S TILGDGS++LI+D ++ Sbjct: 683 NKGLSGCTILGDGSISLIIDADSI 706 >UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC8_HELMI Length = 702 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 171/404 (42%), Positives = 260/404 (64%), Gaps = 8/404 (1%) Query: 241 AAEQA-PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 A+E+A PT ++ ++ S ++RV +E++D L+NLVGELVI ++ L Q S+ N Sbjct: 302 ASEKARPTAGPGAQEVRKTKGSQTVRVDIERLDNLMNLVGELVINKTRLEQIST---TSN 358 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 +L ++ + R DLQ VM +RM+P+E VF+R+PR+VRDLA +LGK++ L + G Sbjct: 359 LTELNETIEHIDRITTDLQNVVMKVRMVPIEQVFNRFPRMVRDLAKELGKEINLIVEGKE 418 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELD+++I+ I DPL HL+RN++DHG+E+P+ R GK + L A+H+G N+ IEV Sbjct: 419 TELDRTVIDEIGDPLVHLIRNAIDHGVEMPDVRRQKGKPVEAVVRLVAKHEGNNVIIEVE 478 Query: 420 DDGAGLNRERILAKAASQG-LTVSE-NMSDDEVAM-LIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ + + KA +G LTV E DD+ A+ LIF GFSTAE+V+DVSGRGVG+D Sbjct: 479 DDGRGMDPQVLRTKAIQKGLLTVKEAEQLDDQGALNLIFLAGFSTAEKVSDVSGRGVGLD 538 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 V+ I+ + G VEI+++ GT +I LPLTLAI+ + V V DE++ +PL + E+ Sbjct: 539 AVRTKIESLSGSVEIETRLNAGTKFKIRLPLTLAIIQALLVNVGDEIYAIPLGTIDETTS 598 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 + + E VL +RG LP++ L KV V A + VV+++ G ++ L+V Sbjct: 599 IIPGQIKNVQSQEVVL-LRGNVLPLIRLDKVLEVPKAAEAPEELYVVVVRKGEKKAGLIV 657 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 D LIGQ ++V+K+ + + GI+ A ILG+G V+LI+DV L Sbjct: 658 DSLIGQQEIVIKSPGKLLQGISGIAGAAILGNGHVSLILDVGTL 701 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 9/153 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +E+ E L + Q +L L+ + L+ IFR+AH++KG + T GF + Sbjct: 1 MDMSQYMDMFMEESREHLQALNQKILELEDNPQELAILDEIFRSAHTLKGMSATMGFERI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH MEN+L R ++ +NT I++L D ++ ++A + A + D I + Sbjct: 61 AELTHEMENVLSVLRGSQVNVNTAIVDLLFRCLDALESMVEAISSGE---AGNRD-ISEL 116 Query: 123 LRQLALEAKGE-----TPSAVTRLSVVAKSEPQ 150 + QL +G+ + V + V SEP+ Sbjct: 117 VVQLRKAGQGQLADVDAATNVRKAGAVGVSEPK 149 >UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1M2_9PLAN Length = 921 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 224/653 (34%), Positives = 342/653 (52%), Gaps = 63/653 (9%) Query: 12 FFDEADELLADMEQHLLVLQPEA--PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 F EA E LAD+E LL ++ A P+ E ++ +FR HS+KG AG GF+ + H + Sbjct: 12 FVIEASEHLADIENQLLSIEASADSPNVELVHEVFRNVHSVKGVAGFLGFASVGSLAHSL 71 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA-- 127 E++L+ R GE++ +I L D +++ + + + D Q + +A Sbjct: 72 ESVLNMVRGGELRPQGVVIETLLSGFDTLRQMVHHIDRVDDFDVTGHVNQLQEIMNVAKI 131 Query: 128 LEAKGETPSAVTRLSVVAKSEPQD------EQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + GE +A T A P D S Q+ IL+ L+ + +E Sbjct: 132 APSAGELAAAGTSGGSAASQHPLDLAQQFVTDSGLQADPNAILASLR----EQMEPA--- 184 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 A++ S+ P +E T+ ++ KIS A Sbjct: 185 ------AAPKANAQSSQQPKIASEPAPTS--------------DAAINSKISAAN--GAA 222 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 AE P + S +IRV V +D+L+NL GELV+ ++ L Q L + Sbjct: 223 AESTP--------SKGSAADANIRVPVAILDRLMNLAGELVLGRNQLLQI---LQNKSGA 271 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L T +L + +LQE++M+ RM + VF+R+PR+VRD++ KLGKQ L L GS E Sbjct: 272 GLDTVGARLDQVTTELQEAIMNARMQQVGTVFNRFPRMVRDVSQKLGKQCRLQLEGSEVE 331 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDK+++E I DPLTHL+RN++DHGIE PE R GK+ G L + A HQ G + I V+DD Sbjct: 332 LDKTILENICDPLTHLIRNAIDHGIERPEVRAREGKSEAGTLTIRAFHQAGKVHITVSDD 391 Query: 422 GAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 G G++ + + K +G +E+ +SD E LIF PGFSTAE VT+VSGRGVGMDVV Sbjct: 392 GGGIHPQNLRDKGVRKGWFSAEHAASLSDREALRLIFRPGFSTAEVVTEVSGRGVGMDVV 451 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 K NI+K+GG VE+ S G GTT+ + LPLTLAI+ + V E + +P ++++E ++ Sbjct: 452 KTNIEKLGGTVEVDSTPGAGTTVHVKLPLTLAIIPSLIVGSCGERYAIPESSIIELVRFT 511 Query: 539 EAD----LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-----VVILQSGG 589 D + G E L +RG LP+V L + + + KT +++++ G Sbjct: 512 PGDKSMRVERFQGAE-ALRLRGTLLPLVRLSSLLSTSSKKTPIATDTSRAHNIIVVEGGV 570 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 RY ++VD ++ Q+VVK L + + ++ AT+LGDG VA I+D+ + A Sbjct: 571 VRYGIVVDAVLDPEQIVVKPLGRHIKSCRCLAGATVLGDGQVAFILDIPGIAA 623 >UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRN2_ALKMQ Length = 685 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 165/409 (40%), Positives = 258/409 (63%), Gaps = 12/409 (2%) Query: 239 KLAAEQAPT----GRVERE-KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 ++ A+QA T G + E K RS ++RV ++++D L+NLV EL+I ++ L Sbjct: 279 EMKAQQAVTVTEAGTEKNEVKEKRSKTGKTVRVDIDRLDNLMNLVSELIIIKTRLEDIG- 337 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 D ++ + L+R L ++VM +RM+P+E VF+R+PR+VRDL+ LGK++ L Sbjct: 338 --DDGKRQNMNEATEHLERITTSLHDAVMKVRMVPIERVFNRFPRMVRDLSKDLGKEISL 395 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 L G TE+D+++I+ I DPL HL+RNS+DHGIE PE R+ GK+ G + L A G + Sbjct: 396 VLSGEETEVDRTVIDEIGDPLIHLIRNSIDHGIEDPEYRMDIGKSKSGTVKLIAYPDGNS 455 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSG 470 + IE+TDDG G+N ++ KA +GL +E M D E L+F GFSTA++V+DVSG Sbjct: 456 VVIEITDDGQGVNILKVKEKAVERGLVNAEQADLMDDKEAVELLFTAGFSTADKVSDVSG 515 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVG+DVVK I+ +GG +E+ S++G G+ I LPLTLAI+ + V V +E + +PL++ Sbjct: 516 RGVGLDVVKTKIESLGGAIEVDSQKGKGSKFIIRLPLTLAIIQALLVIVGNEKYAIPLSS 575 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 + E ++ + + E +L R E LPI+ L + + A E + VVI++ G + Sbjct: 576 IKEITTISQSHIRKVQNNEIIL-YRNETLPILRLSNLLGASNADIEEDEATVVIVKKGDK 634 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 L+V++LIGQ ++V+K+L V G++ ATILG+G+VALI+D ++ Sbjct: 635 TVGLVVNELIGQQEIVIKSLGKFLGNVQGVAGATILGNGTVALIIDTNS 683 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/106 (33%), Positives = 61/106 (57%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + + F +E+ E L +M +LL L+ D LN IFR AH++KG + T G+ + Sbjct: 1 MDMNQYLEIFIEESKENLQNMNTNLLSLENSLEDMNLLNEIFRIAHTLKGMSATMGYKHI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 + TH MEN+L R EM + +++L E D +++ ++ + S Sbjct: 61 AQLTHEMENVLHSIRSNEMSMTAKVVDLLFECFDRLEKYINEVELS 106 >UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Tax=Alphaproteobacteria RepID=B8IQX9_METNO Length = 878 Score = 302 bits (774), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 221/645 (34%), Positives = 340/645 (52%), Gaps = 79/645 (12%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D + F E E L ++ L+ + + + L IFR H+IKG G G L+ Sbjct: 1 MDDLLREFLTETGEHLDTVDLELVRFEQDPNNQTILRNIFRLVHTIKGTCGFLGLPRLEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKD---IMQEQLDAYKQSQEPDAASFDYICQ 121 H E L+ + R G M + + + L L+T D ++ +L+ + + EP A D I Sbjct: 61 LAHAAETLMGKFRDG-MTVTREAVTLILQTLDRIKVIVAELE--RTAAEPAGADEDLIG- 116 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 AL +++ +GE P A +EP SP Sbjct: 117 ALERMS---EGEIP---------APAEPS-------SP---------------------A 136 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 +TT T V + + A+ PG+++ DD+ ++ E +P++ P K A Sbjct: 137 VTTGTLVPQTLER--ALKPGEVSLDDL----------ERAFREAPGPAPELRPEPA-KPA 183 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A+ P E ++ +IRV V+ ++ L+ +V ELV+T++ L L+ H Sbjct: 184 AKAEPQPEGEGAAISKVQ---TIRVNVDTLEHLMTMVSELVLTRNQL------LEIARHH 234 Query: 302 DLITSMGQLQRNAR---DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + + LQR + +LQE VM RM P+ + + PR+VRDL+ +LG++++L + G+ Sbjct: 235 EDNSYKVPLQRLSNVTAELQEGVMKTRMQPIGSAWQKLPRVVRDLSSELGRKIDLVMQGA 294 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELD+ ++E I DPLTH+VRNS DHGIE +R AAGK G + LSA H+GG I IE+ Sbjct: 295 ETELDRQVLEVIKDPLTHMVRNSADHGIESAAERKAAGKPEKGTIRLSAFHEGGTITIEI 354 Query: 419 TDDGAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 DDG GL+ I KA +G+ E M+D +VA IF PGFSTA+ +T VSGRGVGM Sbjct: 355 ADDGKGLDLAAIRRKAVERGIATEAEVERMNDAQVAKFIFHPGFSTAKAITSVSGRGVGM 414 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVVK NI+ +GG V+I+++ G GTT I +PLTLAI+ + V + F +P +V+E + Sbjct: 415 DVVKTNIELIGGTVDIRTQFGQGTTFTIKIPLTLAIVAALIVSARNHRFAIPQVSVLELV 474 Query: 536 QPREADLHPLA--GGERVLEVRGEYLPIVELWKV--FNVAGAKTEATQGIVVILQSGGRR 591 + + H + G VL +R LPIV + + + A + +G VV+ Q G +R Sbjct: 475 RVQPGSDHTVERINGSPVLRLRDRLLPIVPIAGLLGLDTDAAAVSSDEGFVVVSQVGRQR 534 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 + +LVD + ++VVK + + R +P S TILGDG+V LI+D Sbjct: 535 FGILVDGVFHTEEIVVKPMSTKLRHIPLYSGNTILGDGAVVLIID 579 >UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Tax=Methanococcus vannielii SB RepID=A6UNQ8_METVS Length = 957 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 167/451 (37%), Positives = 285/451 (63%), Gaps = 12/451 (2%) Query: 196 SAIL--PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE 253 SAI+ D +ED+I ++ E + ET++ + S + L + +++ Sbjct: 513 SAIIYYNSDSSEDEIREIILKTPEIIDTSVETLDFDHEDSVVEIKSLKIDSEKENLKKQQ 572 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + + +S ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L Sbjct: 573 QAEAAKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDL---KELHNAVGRLNML 629 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 A +LQE VMS+RM+P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + +P Sbjct: 630 ATELQEEVMSMRMIPVGFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDELAEP 689 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE---RI 430 LTHL+RNSLDHGIE E R+ +GK+ G L L A + + I + DDG G+N + +I Sbjct: 690 LTHLIRNSLDHGIETSEDRIKSGKSEKGILKLIATRERDRVNIIIKDDGKGINPDFMRKI 749 Query: 431 LAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 + K +E ++D+E +IF PGFSTAE+V+DVSGRGVGMDVV+ ++ +GG V Sbjct: 750 VVKKGLYSKEEAEKLTDNEAVNVIFLPGFSTAEKVSDVSGRGVGMDVVRSKVESLGGSVS 809 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 ++SK G GT I + LPLT+AI+ + V++ +++ LPL +V++ + ++ + L G E Sbjct: 810 VKSKVGVGTEITLHLPLTMAIIQTLLVKLNSQIYALPLTSVLDVVSIQKDQIKNLEGQEA 869 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGI-VVILQSGGRRYALLVDQLIGQHQVVVKN 609 ++ R LP++ L N G T +++G+ VV+++ + +++D++IG+ ++VVK Sbjct: 870 II-YREHLLPVIWLKDALNQYG--TSSSEGLYVVVVEKNKDKIGVILDEVIGRDEIVVKP 926 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSAL 640 L + V G++ ATILGDG VALI+D++ + Sbjct: 927 LTGILKNVNGLAGATILGDGKVALILDLNNI 957 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/98 (34%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQL-NAIFRAAHSIKGGAGTFGFSVL 62 D+ + + F EA+E L + Q+++ L+ +AE++ N IFR+AH++KG A T GF + Sbjct: 3 DMEQYKELFMTEAEEHLQSLNQNMVELENSPENAEEIINLIFRSAHTLKGSARTLGFEHI 62 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 TH ME++LD R G +++N +I++L + D +++ Sbjct: 63 SSLTHHMEDILDYIRDGRIKVNREIVDLLFKCLDALEK 100 >UniRef50_Q21IQ8 ATP-binding region, ATPase-like protein n=53 Tax=cellular organisms RepID=Q21IQ8_SACD2 Length = 767 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 176/428 (41%), Positives = 259/428 (60%), Gaps = 22/428 (5%) Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 E SP T PV +A G + + T++RV +++D ++N+VGELV+ Sbjct: 343 EPTAPSPVKPTAPVAAPKPREAAPG-----GNSAAAGETTVRVDTQRLDDIMNMVGELVL 397 Query: 284 TQSMLAQRSSELDPVNHGDLI--TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 ++ L + ++ D + ++G L DLQ +VM RM P++ VF R+PR+VR Sbjct: 398 VRNRLVRLG-----IDSADEVMQKAVGNLDVVTADLQTAVMKTRMQPIKKVFGRFPRVVR 452 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DLA L K++ L L G T+LDK+L+E + DPL HLVRNS+DHGIELP R GK VG Sbjct: 453 DLARNLKKEINLELQGEETDLDKNLVEALADPLVHLVRNSVDHGIELPGAREEKGKPRVG 512 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPG 458 +IL+AE +G +I + +TDDGAG++ + KA +G+ + +SD E LIFAPG Sbjct: 513 KVILAAEQEGDHILLSITDDGAGMDPNGLRDKAVEKGILEPDAAARLSDTEAFNLIFAPG 572 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FST +++DVSGRGVGMDVVK I ++ G +EI+SK G GT I +PLTLAI+ + + Sbjct: 573 FSTKTEISDVSGRGVGMDVVKTKITQLNGSIEIKSKIGEGTRFIIKVPLTLAIMPTLMIM 632 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL--WKVFNVAGAK-- 574 V + F LPL +V E + H + G++ + +R +PI EL W V + + K Sbjct: 633 VGKQAFALPLVSVNEIFHMDLSRTH-VVDGQQCVTIRDHAVPIFELKKWLVRDHSIYKND 691 Query: 575 --TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 +++ +G VVI+ G +R +VDQLIGQ +VV+K L + PG++ ATI GDG++A Sbjct: 692 PESDSKEGHVVIVSVGTQRVGFIVDQLIGQEEVVIKPLGKMLQGTPGMAGATITGDGTIA 751 Query: 633 LIVDVSAL 640 LI+DV +L Sbjct: 752 LILDVPSL 759 Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 51/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q F EA E+L + + L+ L+ D E LNAIFR H++KGGAG + + + Sbjct: 8 EILQDFLVEAGEILEQLSEQLVDLEQRPDDKELLNAIFRGFHTVKGGAGFLQLNAMVDCC 67 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H ENL D R G+ ++++++++ L+ D++ EQ D K QE AS + I Sbjct: 68 HATENLFDMLRNGKRVVSSELMDVVLQALDLVNEQFDEVKNRQEITPASPELIA------ 121 Query: 127 ALEA--KGETPSAVTRLSVVAKSEPQD 151 ALEA GETP+ V A +P + Sbjct: 122 ALEALINGETPAGAA--DVAAPEQPDE 146 >UniRef50_Q8TLH0 Chemotaxis sensor histidine kinase n=2 Tax=Methanosarcina RepID=Q8TLH0_METAC Length = 882 Score = 302 bits (773), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 163/381 (42%), Positives = 242/381 (63%), Gaps = 9/381 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 +IRV +D ++NLVGELVI + L Q S E N +L + G L ++ LQ+ VM Sbjct: 501 TIRVRTSNLDNIMNLVGELVINKGRLLQISQEY---NLPELEEATGALDKSISSLQDEVM 557 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 IRM+ +E VFS++PR+VRDL+ K K +E + G TELD+++++ I DPL HLVRN++ Sbjct: 558 LIRMVKIERVFSKFPRMVRDLSRKFDKNIEFEIEGQDTELDRTILDEISDPLVHLVRNAV 617 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIE PE R AGKN VGN+ LSA + N+ IE+ DDG G++ E + KA +G+ + Sbjct: 618 DHGIEYPEAREKAGKNEVGNIKLSARREKNNVIIEIEDDGKGIDVEVLKKKAVEKGIFSA 677 Query: 443 ---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 EN+S++E+ M+IF+ GFST E T++SGRGVGMD VK ++K+GG V + SK+G T Sbjct: 678 FDVENLSEEEIRMIIFSLGFSTKESPTEISGRGVGMDAVKTAVEKLGGKVRVYSKKGEFT 737 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 IRI LP T+AI+ + V V E + +P++ V+++L +D + L VL +R + + Sbjct: 738 RIRIDLPPTVAIIKSLLVEVGPETYAIPISNVVKALSVDSSD-YKLVKETPVLYIRDKLI 796 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P EL ++F+V K+ + I +I++ L+VD +I Q ++V+K L + + G Sbjct: 797 PTAELKEIFHVECEKS--NKEIAIIVEKENEEVGLIVDSIIDQQEIVIKPLGNIFSNSKG 854 Query: 620 ISAATILGDGSVALIVDVSAL 640 ATILGDG V I+DVS L Sbjct: 855 FIGATILGDGRVIPIIDVSML 875 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 3/123 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M D++ + F E E L Q + L E + ++ IFR H+IKG AG G+S Sbjct: 1 MESDMAAYKSDFLQEVYECLDVFNQSFVDL--ENGETGAIDEIFRITHTIKGMAGFLGYS 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L+ H ME +L + G+++++ +++++ L T D + E + +S + D+ D + Sbjct: 59 FLEHLCHSMEEVLCGIKNGDIKIDGELVDILLSTVDRIIEIVKQI-ESSDNDSVKIDDLL 117 Query: 121 QAL 123 +A Sbjct: 118 KAF 120 >UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDW8_LEPBA Length = 643 Score = 301 bits (771), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 206/660 (31%), Positives = 346/660 (52%), Gaps = 50/660 (7%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDA-----EQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + EA E L ++E LL + D + L+ +FR H++KG +G FG S + + Sbjct: 9 YLTEAKECLENIETGLLNFEKTTLDGSLVERDLLDTLFRHFHTVKGSSGFFGLSGIVKVA 68 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL----------DAYKQSQEPDAASF 116 H ENLLD R + + + + L D++ E + D Y + Q Sbjct: 69 HAAENLLDYLRNKPEVQDEETLEILLSALDLLNELVIHEENSPTGGDLYSEDQIRFLEKT 128 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + L+ ++ ++ ++ + V+ E ++S S+ + + Sbjct: 129 NQKLSELKNISTDSNLDSNTQVSSKEFGLFLEETPKESGSEE-----FGIFTSNSTSKNQ 183 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 EE G T +S+ G ++ IT+ L F + FE K + P Sbjct: 184 EEFGLFQTTP-----KESVPQEF-GLFHQEPITSSLEFGL------FEPT----KENLVP 227 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 + AP+ + E +K+ + + IR+ +K+D L+++VGE+VI + M+ + +L Sbjct: 228 SKSDSQPNAPSTKKEEKKSVQKKD---IRIDTDKLDSLLDIVGEIVINEPMVTEHP-DLQ 283 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 + + S QL++ R+LQE +S+RM+P+ VFSR RLVRD A K GK V+L + Sbjct: 284 KLKLENFQKSALQLKKLIRNLQEITLSLRMVPIAGVFSRMERLVRDTAKKTGKLVDLVIS 343 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TE+DKS+IE + DPL H++RN++DHG+E PE+R GK+ G + L+A G + I Sbjct: 344 GEDTEIDKSIIEEMYDPLVHIIRNAIDHGLETPEERKEVGKSPKGKIHLTAVQSGKEVWI 403 Query: 417 EVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 EV DDG GL R++IL KA + GL + +N+ D+EV +F PGFSTA++VTD+SGRGV Sbjct: 404 EVRDDGRGLQRDKILRKAITLGLIHQSEVDNLKDEEVWDFLFHPGFSTAKEVTDLSGRGV 463 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 G+DVV++N+ + G V++ S GT I +PLTLAI++G+ VR ++ FILP V E Sbjct: 464 GLDVVRKNVTTLKGFVDVSSNPTQGTIFLIRVPLTLAIIEGLVVRKSETYFILPSIDVKE 523 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT---QGIVVILQSGGR 590 ++ + ++ L ++ R + IV++ +F E + +++ +S Sbjct: 524 TIYIKNEPINELYRNNHSIQYRENQISIVDIDLLFGKESELNENNSIEEKYMIVTESHEN 583 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 + ++ D+++G +V+K + ++ + G++ TILG+G LI+DV L IN Q MA Sbjct: 584 QMGIVFDEILGNQSIVIKPISPLFKNINGLAGCTILGNGHAGLILDVRKL--IN--QHMA 639 >UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP0_ACTMD Length = 760 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 167/392 (42%), Positives = 255/392 (65%), Gaps = 9/392 (2%) Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNA 314 + RS +SIRV V +D L+ LVGELV+T++ + + + D +L + +L Sbjct: 200 SKRSVADSSIRVDVNLLDALMRLVGELVLTRNQMIRAA---DAAGEPNLSRAAQRLNLIT 256 Query: 315 RDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL 374 +LQESVM RM P++ ++S+ PR+VRDL+ G++VEL + G+ TELD+SL+E + DPL Sbjct: 257 SELQESVMKTRMQPIKQLWSKLPRVVRDLSSACGREVELVMEGAETELDRSLLEAVKDPL 316 Query: 375 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 THLVRN++DHGIE PE R+A GK+ G L L A H+ G + +EV DDGAG++ +++ A A Sbjct: 317 THLVRNAVDHGIEPPETRVANGKSREGTLTLRAYHEHGQVIVEVCDDGAGIHPDKVGATA 376 Query: 435 ASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 +G+ E+M +DE+ L+F PGFSTA +V++VSGRGVGMDVV+ NI+ +GG V++ Sbjct: 377 VKRGVITQSQLESMDNDEILKLVFRPGFSTAAKVSNVSGRGVGMDVVRANIEAIGGAVDL 436 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME--SLQPREADLHPLAGGE 549 +S G GTT R+ +PLTLAI+ + V D+ + +P AV E + + + G Sbjct: 437 KSVPGKGTTWRLNIPLTLAIVQALIVDSGDQRYAIPQMAVHELVYVDGQSGSVVEYVSGA 496 Query: 550 RVLEVRGEYLPIVELWKVF-NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 V +RG+ LP+V L +V + K ++ V +L++ GR++ L+VD+++ +VVVK Sbjct: 497 PVYRLRGKLLPLVRLSEVLGGPSTGKGSDSEIYVAVLKAEGRQFGLVVDRVLNTEEVVVK 556 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L S ++ V S ATILG+G V+LI+DV +L Sbjct: 557 PLASRFKDVGCYSGATILGEGQVSLILDVQSL 588 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 58/105 (55%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D D Q F E+ E L +++ L+ L+ E E+L +IFR H+IKG +G F+ L+ Sbjct: 3 DFDDVVQEFLVESYENLDQLDRDLVALEKEPKSHERLASIFRTIHTIKGTSGFLAFTKLE 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 + TH+ E+LL R G +L+ ++ L D ++E L +Q+ Sbjct: 63 QVTHVGESLLVRLRDGTQELDKPSADVLLRMVDTVRELLAQIEQN 107 >UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor kinase CheA n=11 Tax=Firmicutes RepID=C4Z5I4_EUBE2 Length = 711 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 168/411 (40%), Positives = 254/411 (61%), Gaps = 21/411 (5%) Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A +Q P + T S+ ++RV +EK+D L+NLV EL+I ++ L S D Sbjct: 310 AKKQTPAANNNKSGKTVSH---TVRVDIEKLDVLMNLVSELIIAKNGLVSASVTEDGT-- 364 Query: 301 GDLITSMGQ--------LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 TS+ Q L+R +L ESVM +RMMP+E VF++YPR++RDL KLGK++E Sbjct: 365 ----TSVNQKFGEQIEYLERVTTNLHESVMKVRMMPIESVFAKYPRMIRDLNKKLGKKME 420 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 L + G TELD+++I+ I DP+ HL+RNS DHG+E E R GK VG++ L A +G Sbjct: 421 LYMSGEETELDRTVIDEIGDPIMHLLRNSADHGLESAEVRAERGKPEVGSIWLDAYQEGN 480 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVS 469 N+ IEV DDG G++ E++ KA +G E +++ E L+F P FST+++VTDVS Sbjct: 481 NVVIEVRDDGNGIDVEKVKQKAVEKGNLTQEQADVLTEKEAIDLLFKPSFSTSDKVTDVS 540 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVG+DVVK I+ +GG VE+++ G G+T I LPLTLAI+ + V+V +E + + L Sbjct: 541 GRGVGLDVVKSKIEALGGDVEVKTTYGEGSTFSIRLPLTLAIIQALMVKVGEEKYAIALG 600 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 ++ E+++ + V+ +RG +P++ L ++ +V G E+ ++VI++ G Sbjct: 601 SI-ETIEDVPVSEIKYVHAKEVINLRGNVIPLIRLRELLDVPGEPEESDNIVIVIVRKGD 659 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 + L+VD LIGQ ++V+K+L IS ATILGDGSVALI+D + L Sbjct: 660 KLAGLVVDNLIGQMEIVIKSLGKYININRMISGATILGDGSVALIIDANTL 710 Score = 92.4 bits (228), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 43/153 (28%), Positives = 90/153 (58%), Gaps = 2/153 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + MD+S + + F DE++E L ++ +++L+ E +++ +N IFRAAHS+KG AGT G+ Sbjct: 5 LKMDVSQYLEIFIDESNEHLQNLSDGIMILEKEPDNSDTINEIFRAAHSLKGMAGTMGYK 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +Q TH MEN+ E R G +++++ ++++ + D +++ ++ +++ + + I Sbjct: 65 RMQNLTHDMENVFSEVRNGNIKVDSRMVDVLFQCLDALEQYVNNIQETSDEGTDDNEPII 124 Query: 121 QALRQLAL--EAKGETPSAVTRLSVVAKSEPQD 151 +AL + E KG P + V A+ + ++ Sbjct: 125 KALNSFIVNNEDKGILPEEAKKEDVPAEEKKEE 157 >UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GR06_THISH Length = 691 Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 170/392 (43%), Positives = 252/392 (64%), Gaps = 26/392 (6%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD------PVNHGDLITSMGQLQRNAR 315 TS+RV +++D ++NLVGELV+ ++ LA S++ V++ D++T+ Sbjct: 305 TSVRVDTKRLDDIMNLVGELVLVRNRLATLRSKMSDEQVAKAVSNLDIVTA--------- 355 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 DLQ +VM RM P++ VF R+PR+VRDLA L K+++L L G T+LDK+L+E + DPL Sbjct: 356 DLQAAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLV 415 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRN++DHGIE PE+R+AAGK+ G+++LSAE +G +I + + DDG G++ + + AKA Sbjct: 416 HLVRNAVDHGIESPEERVAAGKSRTGHVVLSAEQEGDHILLTIADDGKGMDPDVLRAKAV 475 Query: 436 SQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +GL ++ M+D + +IF GFST E ++D+SGRGVGMDVVK I ++ G +EI Sbjct: 476 EKGLMDEDAAQRMTDQDAFNVIFMAGFSTKEAISDISGRGVGMDVVKTRIAQLNGTIEID 535 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL--AGGER 550 SK+G G+T+RI +PLTLAIL + V + ++ F LPL V E + DL + Sbjct: 536 SKKGQGSTLRIKVPLTLAILPTLMVVLGNQRFALPLANVSEIF---DLDLSRTNHVDDQE 592 Query: 551 VLEVRGEYLPIVEL--WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 V+ VR + LP+ L W + A TQ +VV+ G RR +VD LIGQ +VV+K Sbjct: 593 VIMVRNQALPLYYLRRWLARSDAPKVNRETQHVVVVF-VGNRRVGFVVDSLIGQEEVVIK 651 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L ++ +PG + ATI GDG +ALI+DV +L Sbjct: 652 PLGASLHGLPGFAGATITGDGGIALILDVPSL 683 Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D D Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MSLDSDDEILQDFLVEAGELLEGLSEQLVELERNPTDRDLLNAVFRSFHTIKGGAGFLNL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 + L H E++ + R+G+ Q++ +++ L+ D++ + EP A Sbjct: 61 THLVAVCHRAEDVFNVLRQGQRQVDGALMDAVLQVLDVVNRMFGEIRGGVEPGPA 115 >UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XR52_DESMR Length = 718 Score = 301 bits (770), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 175/383 (45%), Positives = 244/383 (63%), Gaps = 17/383 (4%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQES 320 ++RV ++D L+++VGELVI QS L Q ++ +LD V D L+R +L++ Sbjct: 325 TLRVDAARLDSLVSMVGELVILQSRLRQAAKARDLDAVTEVD-----EDLERLTDNLRDV 379 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 + +RM+P+ VFS++ RL RDLA LGK VE G TELDK++I+RI DPL HL+RN Sbjct: 380 ALGLRMLPIGSVFSQFTRLTRDLAANLGKDVEFVAHGGETELDKTVIDRIKDPLVHLLRN 439 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 SLDHG+E PE+R AAGK+ G + LSA H GGN+ I + DDG G++ + KA +GL Sbjct: 440 SLDHGLERPEERQAAGKSPQGRVTLSANHSGGNVVIVIADDGRGIDVAAVRRKAVERGLV 499 Query: 441 VSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E S+ E+ IFAPGFSTA +V+DVSGRGVGMDVVK+NI+ + G VE+ S G G Sbjct: 500 APEAEPSEKELLDCIFAPGFSTAAKVSDVSGRGVGMDVVKKNIEALRGTVELASVLGQGA 559 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR--EADLHPLAGGERVLEVRGE 557 T+ I LPLTLAI+DG +V V + FI+PL A + Q R E + + ER+ G Sbjct: 560 TVTIRLPLTLAIIDGFNVMVGGDSFIVPL-ANLRGFQERFVEGQVRTVDTIERM----GS 614 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 P+V L ++F+V G + + VVI ++ G VD++IG+ Q V+K+L+ YR + Sbjct: 615 MAPVVSLRRLFDVPGDQPGYER--VVITEAEGETVGFCVDKVIGRQQAVIKSLDDCYRHL 672 Query: 618 PGISAATILGDGSVALIVDVSAL 640 IS TI GDGS++LI+DV L Sbjct: 673 KWISGTTINGDGSISLILDVPQL 695 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 7/88 (7%) Query: 36 DAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETK 95 D +L+A FRA H+IKGG FGF + TH +E +LD R G++ ++ ++++L L K Sbjct: 35 DTARLDACFRAMHTIKGGGAMFGFEEISRFTHDVETVLDRVRTGDLPVSRELLSLTLAAK 94 Query: 96 DIM-------QEQLDAYKQSQEPDAASF 116 D + ++Q DA++ + + ASF Sbjct: 95 DHILTLLEAPRDQQDAHRNASDRLLASF 122 >UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHP2_CALS8 Length = 650 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 212/653 (32%), Positives = 342/653 (52%), Gaps = 44/653 (6%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNA-IFRAAHSIKGGAGTFGFSVLQETT 66 ++ F E+ +LL D+E + L+ + +N I R H++KG + +S + + Sbjct: 9 LFEIFIAESKQLLNDLENIFICLKERKLILKNVNNDIMRIFHTLKGSSAAMKYSDISQVC 68 Query: 67 HLMENLLDEARRGEMQLNT--DIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E+L + + N +IN FL+ D + +D S E S Q L Sbjct: 69 HKAEDLFVKLNSIHITPNIVDQLINCFLKVIDCLNLDID----SIETTDFSASRTAQKLI 124 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI-ILSRLKAGEVDLLEEELGHLT 183 +E E + + D +++ RI + AG ++ G + Sbjct: 125 DQLIENINENQNTAS----------VDNIEKTKKKYRIKVFFEDGAGMENV--RAYGVIW 172 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITA----------VLCFVIEADQI--TFETVEVSPK 231 L DV D P +I D TA V+ V+E D++ F+ V Sbjct: 173 KLKDVGDIIDYT----PKNIQNDPNTADVIQKKGFELVIETVLEKDEVFQLFDDVLYLSN 228 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 I ++ E+ + + I V VEKVD++I+L+GEL+I S L Sbjct: 229 IEIEFADNMSNEEFSQNGSKLGGGNTNLGQKIINVNVEKVDKIIDLIGELLINFSGLVLS 288 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 L + D S ++ R +LQE MS+RM+ + F R R+ +++ KL K+V Sbjct: 289 VESL-GIASEDFKKSYSKVSRVINELQEIAMSMRMVSLSNTFQRLRRVALEVSEKLHKKV 347 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 + + G TELD+ +IE I DPL HLVRN++DHGIE P++R GK GNL + A+ Sbjct: 348 TVYVTGEETELDRMMIEHITDPLIHLVRNAIDHGIETPDERRKQGKAEEGNLYIHAKSTN 407 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSG 470 + I + DDG G++RE+IL KA +G+ S+ N++D+++ LIF PGFST ++ T+ SG Sbjct: 408 SEVLITIQDDGRGIDREKILEKALEKGIIKSKNNLTDEDIYSLIFMPGFSTKDEATEYSG 467 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVG+D+VK NI+++GG + + S++G GT+ + +PLTLAI+DGM V + + F++P+ + Sbjct: 468 RGVGLDIVKNNIERIGGKILVTSEKGRGTSFTLKIPLTLAIIDGMLVELNSKKFVIPITS 527 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE---ATQGIVVILQS 587 ++E ++ + D L G++ + +R E P+V+L K+F G +TE T I V+++ Sbjct: 528 MVEIIRL-DTDKIILEAGKKFILLREECYPLVDLKKIF--FGKETEFNSNTFNIGVMIEE 584 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 G++ LLVD LI Q Q+V+K L R +S T+LGDGS+ALI+D+S L Sbjct: 585 NGKKAVLLVDNLISQQQIVIKPLPLLLRNAQVVSGCTLLGDGSIALILDISGL 637 >UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vulgaris RepID=Q72AN2_DESVH Length = 697 Score = 301 bits (770), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 230/699 (32%), Positives = 339/699 (48%), Gaps = 92/699 (13%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNA-IFRAAHSIKGGAGTFGFSVLQETTHL 68 + F DEA ELL DME L L+ + PD L A +FR H++KG FG++ H Sbjct: 9 RLFGDEARELLIDMESLFLELE-QTPDDRALVARVFRTMHTLKGSGAMFGYTEAARVAHA 67 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD---------------------AYKQ 107 +E++ D R G + L ++++ L LE KD +Q L+ A + Sbjct: 68 LEDVFDRVRHGRLPLTSELLGLCLEAKDHLQTLLEGDPADVPVAVREASDALMLRIAAFE 127 Query: 108 SQEPD---------AASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 E D A +D ++ +A GE + V + D R Sbjct: 128 HDEADVDDGQAVHAAKPYDTGVPEHMTISGDATGEAEVCLW----VRLTPADDWMWRGLD 183 Query: 159 PRRIILSRLKAGEVDLL----EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF 214 P R++ S G +++ + L H+ + V+ L+ + D+ D +L Sbjct: 184 PLRLLDSFRGYGPFEVVPVFADGGLEHVGEVPFPVRWEGVLTGRVSADVLRQDYAWLL-- 241 Query: 215 VIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV-------------EREKTTRSNES 261 D + + + PPV L + A GRV ERE + Sbjct: 242 ----DSENLSIMSLGKRSDCPPVRALLS-AAVGGRVNDPLALMAAARAMEREDICNCMDV 296 Query: 262 TS---------------IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 S IRV K+D+L+ VGELVI QS L+Q + D + Sbjct: 297 QSVASEVAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLVRGVP----DDAMRE 352 Query: 307 MGQ-LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + + L+R A L++S MS+RM+PM F + RLVRDLA +LGK+V G TELDK+ Sbjct: 353 VAEGLERLAGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTELDKT 412 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 LI+++ DPL HL+RN++DHGIE PE RLA GK G + L A H GG + I V+DDGAG+ Sbjct: 413 LIDQLRDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDGAGV 472 Query: 426 NRERILAKAASQGLTVSENMSDDEVAM-LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 + E++ +A + GL E D + L++ PGF+TA V+++SGRGVGMDVV I Sbjct: 473 DLEKVRLRAVAMGLIPPETEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVHSAIAA 532 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G +++++ G GTT I LPLTLAI+DGM V V + +I+PL V L+ R D Sbjct: 533 LRGSLDMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMVEACLE-RFVD--- 588 Query: 545 LAGGER---VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 G R +E RG +P V L + V G + + V++ G VD ++G Sbjct: 589 --GAVRTVECIEYRGRLIPCVSLRLLLGVPGEQPGYER--VIVAGKEGHEVGFAVDAVVG 644 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 Q V+K + + R V IS T+ DG ++LI+DV L Sbjct: 645 LQQAVIKGVGNLCRNVAWISGTTVDADGGISLILDVVQL 683 >UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Tax=Desulfuromonadales RepID=B3E3M0_GEOLS Length = 701 Score = 300 bits (769), Expect = 8e-80, Method: Compositional matrix adjust. Identities = 171/433 (39%), Positives = 268/433 (61%), Gaps = 13/433 (3%) Query: 219 DQITFETVEVSPKIS----TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL 274 D+ F+ V V+ S TP VL A + P G E + + S ++RV + K+D+L Sbjct: 265 DRADFQPVAVTASASETADTPVVLP--ASELP-GASPDEAFSAKSMSRTVRVDIGKLDEL 321 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ----LQRNARDLQESVMSIRMMPME 330 +N+VGELV+ S ++ ++ + + +G+ L+R DLQ+ VM IRM+P+ Sbjct: 322 MNIVGELVLAHSSISSIANRMRTEGFSRMAIDLGKAAKGLERRLTDLQKGVMDIRMIPVG 381 Query: 331 YVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPE 390 ++ + R+VR ++ + GK++EL L G+ TELDK ++E I DPL H++RN++DHGIE PE Sbjct: 382 QLYEKMSRIVRKISREQGKKIELKLYGAETELDKLIVEDIADPLMHIIRNAIDHGIESPE 441 Query: 391 KRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDE 449 +RLAAGK+ G + LS+ +G ++ IEV DDGAG++ E++ KA S+GL N MSD E Sbjct: 442 RRLAAGKDERGTVRLSSFQKGNHVVIEVEDDGAGIDLEKVKQKALSKGLVQDINGMSDRE 501 Query: 450 VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTL 509 LIF PGFSTA+ +TD+SGRGVGMDVV+ NI + G V+I+++ G G+ I+LP+TL Sbjct: 502 ALDLIFMPGFSTADTITDISGRGVGMDVVRNNIAAVSGMVDIETRLGQGSRFTIILPITL 561 Query: 510 AILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 AI+ + + A + +P+ +V+ESL AD+ + G E V+ +R + LP++ L ++F Sbjct: 562 AIIKALIIFCAGRTYAIPITSVVESLILEPADIKTVEGKE-VINLREQTLPLLRLERLFR 620 Query: 570 VAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDG 629 V + VV++ S +R ++VD L+GQ +V+K L +R + GIS A LGD Sbjct: 621 VERVGINPGEQYVVVVGSAEKRLGIVVDDLLGQQDIVIKPLGPAFRTLRGISGAADLGDQ 680 Query: 630 SVALIVDVSALQA 642 L++D + A Sbjct: 681 RTILVLDAGGIIA 693 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 4/102 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVL----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D + F EA+E++ ++ L L + A + + LNAIFR AHS+KG AG FGF ++ Sbjct: 10 DAARDFLAEAEEIVEELGTQLADLADMAEKGAWEPDLLNAIFRGAHSLKGLAGMFGFGMI 69 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA 104 ET H ENLLD R G++ L ++ L + +++ L A Sbjct: 70 AETAHHAENLLDWLRMGKISLTPAVLELLFSSAELLTTLLRA 111 >UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCN6_CELJU Length = 735 Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 178/435 (40%), Positives = 268/435 (61%), Gaps = 20/435 (4%) Query: 230 PKISTPPV-LKLAAEQAPTGRVEREKT----TRSNESTSIRVAVEKVDQLINLVGELVIT 284 P+I T V ++ A + V+++KT S E+ IRV +++D+LINL+GELVI Sbjct: 303 PRIGTILVDNQVVAAEIVDAAVDKQKTINERKNSPENRFIRVDADRLDKLINLIGELVIN 362 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 + + S L + +T+MG RD + +++RM+P+ F ++ R+VRD A Sbjct: 363 RQRIDLLVSSLANPVLSEAVTTMGSFTEQIRD---AALTLRMVPIGETFHKFKRVVRDTA 419 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 LGK+++L + G+ TELD+S++E++ DPL H+VRN++DHGIE R K + G L Sbjct: 420 RSLGKEIDLVIEGADTELDRSMVEKLNDPLMHIVRNAMDHGIESVHVRRERNKPAAGTLK 479 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAE 463 L+A H GNI I ++DDG GL+ ERI KA + GL S +S E+ LIF PGFSTAE Sbjct: 480 LTARHDAGNIVIGISDDGGGLDVERIRKKAFANGLIDDSMQLSQQELFQLIFHPGFSTAE 539 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 QVT++SGRGVGMDVV+RNI+ + G ++I S+ G GT I LPLTLAI+DG V + Sbjct: 540 QVTNLSGRGVGMDVVRRNIEALQGGIDIDSELGAGTQFTIRLPLTLAIIDGFHVAASAVD 599 Query: 524 FILPLNAVMESLQPREADLHPLAG--GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 FI+P N ++E + DL L G+ + +RG+ +P + L +FN+ A+ E + Sbjct: 600 FIVPQNTILECV-----DLKSLNHIQGQHCVNLRGDQVPYIRLRDIFNLPTAEVEREK-- 652 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL- 640 +V++Q G +R L+VD+L G+ Q VVK + ++ + GI +++LG G+VALI+D+ L Sbjct: 653 IVVVQFGDKRAGLVVDELHGEIQTVVKPMGPIFQALKGIGGSSLLGTGAVALILDIQQLI 712 Query: 641 -QAINREQRMANTAA 654 AI +EQ N A Sbjct: 713 HFAIAKEQVRNNIAG 727 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 51/125 (40%), Positives = 71/125 (56%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ QTFF EA +LL ME LL L + D E LN +FRA H+IKG AG FG + Sbjct: 1 MNLDSALQTFFAEAADLLDVMEAALLRLDEDVEDRETLNELFRAVHTIKGSAGLFGLDDI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH +ENLLD AR G++ L+TD++++ L +D + +D + +Q D Q Sbjct: 61 VRFTHTVENLLDHARDGKITLSTDLLSILLPCRDHIVLLVDHARHNQTNDEQCLAQGQQL 120 Query: 123 LRQLA 127 L LA Sbjct: 121 LASLA 125 >UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Tax=Bacteria RepID=A9KND4_CLOPH Length = 697 Score = 298 bits (762), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 156/384 (40%), Positives = 246/384 (64%), Gaps = 9/384 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQS-MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 S+RV +EK+D L+NLV EL+I ++ +++ +E G + L+R +L +SV Sbjct: 316 SVRVDIEKLDDLMNLVSELIIAKNGLVSMNGTETKSDAMGGFNEQIEYLERITTNLHQSV 375 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M +RM+P+E V +R+PR++RDL+ KL K++EL + G TELD+++I+ I DPL HL+RN+ Sbjct: 376 MKVRMVPIESVVNRFPRMIRDLSKKLDKKMELYMTGEDTELDRTVIDEIGDPLMHLLRNA 435 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 DHG+E E+R++ GK +G++ L A +G N+ IEV DDG+G+N E+I KA +G Sbjct: 436 ADHGLESNEERMSLGKPEIGSIFLDAYQEGNNVVIEVRDDGSGINVEKIKNKAIDKGTIT 495 Query: 442 SEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 E M+D E+ L+F P FSTAE ++DVSGRGVG+DVVK I+ +GG++E ++ G Sbjct: 496 EEQAAAMTDKEIIDLLFRPSFSTAEVISDVSGRGVGLDVVKTKIETLGGNIETKTTLSKG 555 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAV--MESLQPREADLHPLAGGERVLEVRG 556 + I LPLTLAI+ + V + E + +PL ++ +E++ +E + V+ +RG Sbjct: 556 SNFIIRLPLTLAIIQALMVELGTEKYAIPLGSIETIENVATKEI---KYVQSKEVIHLRG 612 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +P++ L K+ +V E VVI++ G + L+VD LIGQ ++V+K++ Sbjct: 613 NVIPLIRLNKILDVTENLKETEDLTVVIVKKGDKLAGLVVDNLIGQLEIVIKSIGKYINN 672 Query: 617 VPGISAATILGDGSVALIVDVSAL 640 IS ATILGDG +ALI+DV++L Sbjct: 673 SKMISGATILGDGEIALILDVNSL 696 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 18/195 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + + F DE E L + + LL+L+ E + + +N IFR+AHS+KG AGT G+ + Sbjct: 1 MDVSQYLEIFIDETKEHLQSLNEQLLILEKEPENEDTINEIFRSAHSLKGMAGTMGYKRM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TH MEN+ E R G+M++ +++++ + D ++ LD S + + I ++ Sbjct: 61 QRLTHDMENVFSEIRTGKMKVKAELVDVLFKGLDALESYLDRIITSADEGTEDNEDIIKS 120 Query: 123 LRQL-----------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE 171 L ++ A E+K ET SVV+ +E + + Q+ + L+A Sbjct: 121 LNRILEEGVKAFAQDATESKEETHK-----SVVSAAEVSNLKESVQADIALADHELRA-- 173 Query: 172 VDLLEEELGHLTTLT 186 V+ + EE GH +LT Sbjct: 174 VEKMLEEGGHAYSLT 188 >UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG9_ALIAD Length = 664 Score = 297 bits (761), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 222/668 (33%), Positives = 359/668 (53%), Gaps = 45/668 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 ++ + F E+ E + +E L L+ E + L+ +FRAAH++KG + T GFS L T Sbjct: 4 EYLEAFLAESMENVERLEAFCLTLEREGSKPDLLDEMFRAAHTLKGMSATMGFSKLAALT 63 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY----KQSQEPDAASFDYICQA 122 H +E+LL R ++L ++ L D M+ ++ A K+ EPD + D + A Sbjct: 64 HRVEDLLGTLRDERVRLEPRHVDALLLAVDRMRARIQAIGVSAKEPDEPDDDAMDALAGA 123 Query: 123 LRQLA--LEAKGETPSAVTRLSVVA-KSEPQDEQSRSQSPR----------RIILSR--L 167 LR A + E LS A ++ + ++ + R R+ ++ L Sbjct: 124 LRGGADVGGTREEDSKPFANLSDWANRAAAEGKELYTVHIRLAPDCVMPGVRLAMAYQAL 183 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE-ADQITFETV 226 KA + L+ + V+ ++ +A++ +A +I V V++ D + E Sbjct: 184 KASAI-LMAAHPAEENVMAGQVEATEAFAAVM---VAPGEIDRVRQGVLDVTDVSSCEVS 239 Query: 227 EVSPKISTPPVLKLAAEQ--APT-GRVEREKTTRS------NESTSIRVAVEKVDQLINL 277 +VS S P AEQ AP RV R S ++RV V KVD L+N Sbjct: 240 KVSESHSAPKEDAPRAEQGDAPIEPRVSRHANGSSPAGADLRRDATLRVPVRKVDALMNT 299 Query: 278 VGELVITQSMLAQR-SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 + +LVIT++ LA SS DP L ++ +L R D+Q+ +M +RM+P+E +F RY Sbjct: 300 LSDLVITKTRLATLVSSADDPA----LKEAVERLDRLTGDIQDGLMRLRMVPVETIFHRY 355 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR++RDL +L ++ + + G TE+D+ ++E + + + HL+RN++DHG+E PE R + G Sbjct: 356 PRMMRDLEHRLQREFDFVMTGLDTEMDRVVLEEMGEVIVHLLRNAVDHGLEPPEARESQG 415 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAML 453 K G + L+A G++ +EV+DDG G++R R+L A ++G E MSD+ V L Sbjct: 416 KPRRGIVRLAAYTASGHVYLEVSDDGRGIDRGRVLETAVAKGWITPEEGAAMSDESVYAL 475 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 +F PGFSTAE+V+D+SGRGVG+D V+ ++ +GG + + S G GTT I LPLTLAIL Sbjct: 476 LFRPGFSTAERVSDISGRGVGLDAVREKVEALGGQIRLNSVLGAGTTFTIELPLTLAILS 535 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER-VLEVRGEYLPIVELWKVFNVAG 572 + V V +VF +P V E + D+ + ER V + +PIV+L + + G Sbjct: 536 ALLVSVRGQVFAIPTANVDEVRRVTRDDVRHVQ--ERPVFQDSAGIVPIVDLAERLGL-G 592 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 ++ +A V+ + G RR AL+VD ++ + ++V K L + V + ATILGDG V+ Sbjct: 593 SRRDAYPQTAVVCRDGKRRLALVVDHVLDELEIVNKPLGRYLQGVREFAGATILGDGRVS 652 Query: 633 LIVDVSAL 640 LI+DV ++ Sbjct: 653 LILDVRSI 660 >UniRef50_Q12YX0 Chemotaxis protein CheA n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12YX0_METBU Length = 897 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 161/383 (42%), Positives = 245/383 (63%), Gaps = 11/383 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG--DLITSMGQLQRNARDLQES 320 +IRV V +D ++NLVGELVI + L Q S E H +L + L ++ LQ+ Sbjct: 514 TIRVRVSNIDSIMNLVGELVINKGCLLQISQE-----HKIPELEEATSILDKSITSLQDE 568 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM IRM+ +E VF ++PR+VRDL+ K GK + + G TELD+++++ I DPL HLVRN Sbjct: 569 VMMIRMVKIEKVFKKFPRMVRDLSRKFGKDIAFEIEGQETELDRTILDEISDPLVHLVRN 628 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG-L 439 +DHG+E PE+R AGK+ G++ LSA+ + N+ IE+ DDG GL+ ERI +KA +G L Sbjct: 629 CVDHGVESPEERAKAGKSKTGHIKLSAKREKNNVIIEIEDDGKGLDLERIKSKALEKGIL 688 Query: 440 TVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 +++E + +DE++ LIF G ST + T++SGRGVGMD VK ++K+GG ++I SK+G Sbjct: 689 SLAELDKLGEDEISSLIFTSGLSTKDNATEISGRGVGMDAVKTTVEKLGGKIKIYSKKGK 748 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT +RI LP T+AI+ + + +E++ +P++ V+E+L + D L + +L VR + Sbjct: 749 GTKMRINLPPTVAIIKSLIIESGNEIYAIPISNVVEALDVNK-DNFKLIRDQPLLYVREK 807 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 LP + L + F++ T+ + + +I++ ALLVD +I Q ++V+K L S KV Sbjct: 808 LLPAIRLKEFFDIGEHVTQLEKEVGIIVERENEEVALLVDSIIDQQEIVIKPLGSILSKV 867 Query: 618 PGISAATILGDGSVALIVDVSAL 640 G TILGDG V I+DVSAL Sbjct: 868 KGFIGVTILGDGKVIPILDVSAL 890 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 2/100 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M D+ + F E +E L Q + L E D L+ IFR AH+IKG AG G++ Sbjct: 1 METDMDAYKDDFLQEVNEYLEIFNQAFVDL--ENGDTAALDEIFRVAHTIKGMAGFLGYA 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 L+ H ME +L + E+ ++ ++I++ L T D + E Sbjct: 59 SLERLCHRMEEVLSGIKCNEITIDGNLIDIMLSTVDRINE 98 >UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Tax=Desulfovibrio RepID=B8J0K8_DESDA Length = 1031 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 168/389 (43%), Positives = 255/389 (65%), Gaps = 16/389 (4%) Query: 261 STSIRVAVEKVDQLINLVGELVITQS--MLAQRSSE--LDPVNHGDLITSMGQ----LQR 312 S++IRV E++D L+NL+GEL+I ++ L RS E D V+ + S+ + + R Sbjct: 615 SSTIRVDHERLDHLMNLIGELIINRNRYTLIARSLEDSGDNVDISHVAQSLSETTYAMAR 674 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L + G TELDKS++E I D Sbjct: 675 ISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVMEGEETELDKSVVEVIGD 734 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RNS+DHGIE + RLAAGK + G + L A H+G ++ IE+ DDG G++ ++ Sbjct: 735 PLVHLIRNSVDHGIESEDVRLAAGKPAKGKVTLRAFHKGNSVAIEIEDDGKGIDPAKMRE 794 Query: 433 KAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A +G+ E + D E LIFAPGFS+A+Q+TD+SGRGVGMDVV+ NI+ + G V Sbjct: 795 TAIRKGVITPEEAAQLDDREAVELIFAPGFSSADQITDISGRGVGMDVVRTNIKNLKGSV 854 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 S+ G GT + LPLTLAI+D + V V+ +++ +PL+AV E+ + EA G Sbjct: 855 STYSEVGKGTRFTLSLPLTLAIIDALMVNVSGQMYAIPLDAVSETTK-IEAHRLTDVKGR 913 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGI--VVILQSGGRRYALLVDQLIGQHQVVV 607 + + +RGE L +VE+ ++ + +T+ + VV++ RR L+VD+L+ + ++V+ Sbjct: 914 KAVTLRGEVLGVVEMAEMLGL--PRTDPLPDVLSVVVIHDNDRRLGLVVDRLLERQEIVI 971 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVD 636 K L + + GIS ATI+GDGSV LI+D Sbjct: 972 KPLGAYLGDLKGISGATIMGDGSVILILD 1000 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 2/111 (1%) Query: 1 MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D D + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPELFADFIAEAKEHLETIEPNLLELEKAPGNLALLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ 109 + + + H EN+LDE R+G M + +I+++ L + D +++ +D + S Sbjct: 61 LNRINQLAHKSENILDELRKGSMVVTPEIMDVILASTDALRQMIDNLESSN 111 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DE+ E++ ++ LL L+ E P E +N +FR H++KG +G G+S L TH Sbjct: 225 KDFIDESIEIIENLTNGLLELE-ENPTGQGELVNDLFRFFHNMKGNSGIIGYSDLNALTH 283 Query: 68 LMENLLDEARRGEM 81 E LL+ R+G++ Sbjct: 284 EAETLLNNVRQGKI 297 >UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XIZ8_CALS8 Length = 664 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 158/418 (37%), Positives = 264/418 (63%), Gaps = 19/418 (4%) Query: 238 LKLAAEQAPTGRVEREKTTRS-------------NESTSIRVAVEKVDQLINLVGELVIT 284 +K+ Q GR E ++T + S ++RV +E++D L+NLV EL+I Sbjct: 249 VKVEGTQQEVGRTEEVQSTEAVKVVREQKQEGLQRTSKTVRVDIERLDVLMNLVSELIII 308 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 +S + + + + + + S+ L+R L ++VM +RM+P+E VFSR+PR++RDLA Sbjct: 309 KSRIEGFAKKYNDRQYEE---SIEYLERITTSLHDAVMKVRMVPVERVFSRFPRMMRDLA 365 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 +LGK+ EL + G TE+D+++++ + DPL HL+RN+ DHGIE PE+R+ GK G + Sbjct: 366 RELGKEFELVMSGEDTEVDRTIVDELGDPLIHLLRNAADHGIEEPEERVKNGKPRSGLIK 425 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTA 462 LSA H G N+ IEV DDG G++ E++ KA +GL + ++S+ E+ +F P FST Sbjct: 426 LSAYHDGNNVVIEVEDDGKGIDIEKVKKKAIEKGLLKEDQLDLSEQEIIDFLFLPSFSTK 485 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 ++VT++SGRGVG+DVVK I+++GG +E+++++G GT I LPLTLAI+ + V V DE Sbjct: 486 DKVTNLSGRGVGLDVVKTKIEQLGGMIEVKTEKGKGTKFVIRLPLTLAIIQALLVTVKDE 545 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 ++ +P+ ++ E + D+ + G+ ++ +R + +PI L K+ + A + + V Sbjct: 546 IYAIPIASIKEIIDVARDDIKVVQKGKEIIMLRNQVIPIKYLHKIVGLE-ADLDKKKYTV 604 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VI++ G + ++VD+L+GQ +V+K+L + +S ATILGDGSVA+I+D + L Sbjct: 605 VIVKRGEKLTGIVVDKLLGQQDIVIKSLGKYLEGIRLVSGATILGDGSVAMILDPNML 662 Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 68/102 (66%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT G+ + Sbjct: 1 MDMSQYLGMFIEEAKDHIQSLNDNMLKLEENPEDLQLINEIFRSAHTLKGMAGTMGYVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA 104 Q+ TH MEN+L AR G++++N++I+++ +T D ++E LD Sbjct: 61 QKLTHAMENVLAAARDGKLRINSNIMDVLFKTVDALEEYLDV 102 >UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira interrogans RepID=Q8F3H8_LEPIN Length = 713 Score = 296 bits (759), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 158/400 (39%), Positives = 260/400 (65%), Gaps = 9/400 (2%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 ++E + ++ ++RV K+D LI LVGEL+ ++ L+++ S+ + + LI S L Sbjct: 311 QKESDSIKIQTKTLRVDSSKIDTLIALVGELITQEANLSRKISDSENLQ---LIESSESL 367 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 R +++E +S+RM+P+ +F +Y R+VRDL+ +L KQVEL ++G TELD+S+IE+I Sbjct: 368 YRLVTEIREFALSLRMIPISDLFEKYKRVVRDLSKELNKQVELEIIGGETELDRSVIEKI 427 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DP+ H++RN+LDHGIE E+R+ GK++ G L + A H G+I IE+ DDG GL+ ++I Sbjct: 428 SDPIVHILRNALDHGIETSEERIKKGKHATGQLKIQASHGTGSILIEIKDDGKGLDCDKI 487 Query: 431 LAKAASQGL-TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 L KA S+GL T +N+S+ E+ LIF PGFSTA+QVT++SGRGVGMDVV RNI+ + G V Sbjct: 488 LEKAISKGLITRDQNLSESEIYSLIFQPGFSTADQVTNLSGRGVGMDVVLRNIESLRGTV 547 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 +IQ+ + G++ +I LPLTLAI+DG V+ + FI+P+ V E+++ + L+ + G Sbjct: 548 QIQTLKDQGSSFQIRLPLTLAIIDGFLVKASSLYFIVPMQMVRETVESK-VILNGSSSG- 605 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 + +RGE LP++ L + + E +++L+ + + ++V+ L G+ Q V++ Sbjct: 606 -TMNLRGELLPVLHLSEFLCLESTYFEKEN--ILVLEYEDKSFGIIVNDLHGEVQSVIRP 662 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 + ++ + S +ILG G +A I+DV L R+Q + Sbjct: 663 MAEIFKNIKCFSGTSILGSGEIAFILDVPGLYNSIRDQEL 702 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 37/96 (38%), Positives = 62/96 (64%), Gaps = 1/96 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S+ TF E++ELL+ ME +LL+L+ ++ + E ++++FRA H+IKG +G FG+ + Sbjct: 1 MDLSEVRDTFISESEELLSSMESNLLILEKDSKNNEGIHSVFRAIHTIKGTSGMFGYEPI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIIN-LFLETKDI 97 ++ TH +E+ LD R + L + I LFL I Sbjct: 61 EKFTHEVESFLDRIRSNKQSLTKEGIEFLFLACDHI 96 >UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Tax=Methanococcus maripaludis RepID=A4FXW0_METM5 Length = 920 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 168/443 (37%), Positives = 274/443 (61%), Gaps = 12/443 (2%) Query: 202 DIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV-LKLAAEQAPTGRVEREKTTRSNE 260 D +E+DI ++ E I+ E V S I P LK T + + + +T S + Sbjct: 486 DESEEDIKEIISKTPEITSISIEMVHKS--IEIPEFDLKNKNTTDATSKKQSDNST-SKK 542 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 S ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L A +LQE Sbjct: 543 SQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDL---KELHNAVGRLNMLATELQEE 599 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM +RM+P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + +PLTHL+RN Sbjct: 600 VMGMRMIPVAFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDELAEPLTHLIRN 659 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 SLDHGIE ++R+ GK G L L A + + I + DDG G+N + + K +G+ Sbjct: 660 SLDHGIEHADERIKLGKPEKGVLKLIATRKRDRVNIIIKDDGKGINPDAMREKVIKKGMY 719 Query: 441 V---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 +E ++D+E LIF PGFSTAE V+DVSGRGVGMDVV+ I+ +GG V + S+ G Sbjct: 720 TKEEAEKLTDNEAVNLIFLPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSVSVHSEVGK 779 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT I + LPLT+AI+ + VR+ ++++ LPL +V++ + + + L G E ++ R Sbjct: 780 GTEITLHLPLTMAIIQTLLVRLKEQIYALPLTSVLDVISVEKDQIKNLEGQEAII-YREH 838 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 LP++ L N +E VV+++ + +++D++IG+ ++VVK L + + Sbjct: 839 ILPVIWLKDALNTYEV-SETENLYVVVVEKNKGKVGVILDEVIGRDEIVVKPLTGILKNI 897 Query: 618 PGISAATILGDGSVALIVDVSAL 640 G++ ATILGDG VALI+D++ + Sbjct: 898 NGLAGATILGDGRVALILDLNNI 920 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 61/97 (62%), Gaps = 1/97 (1%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQL-NAIFRAAHSIKGGAGTFGFSVL 62 D+ + + F EA+E L + Q+++ L+ D+E++ N IFR+AH++KG A T GF + Sbjct: 3 DMEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHI 62 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 TH ME++LD R G +++N +I++L + D ++ Sbjct: 63 SSLTHHMEDILDYIRDGRIKINPEIVDLLFKCLDALE 99 >UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Tax=Euryarchaeota RepID=C7P7C7_METFA Length = 969 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 160/403 (39%), Positives = 263/403 (65%), Gaps = 10/403 (2%) Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + E+ P + + +K + + +IR+ +EK+D+L+NLVGELVIT++ +Q +++ Sbjct: 570 SEEKKPEAKPKTDKKEKKKSTQTIRINIEKLDKLMNLVGELVITRANFSQIANKY---QL 626 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 +L ++ +L +LQE VM++RM+P+ YVF+R+PR+VRD A LGK+VE + G+ Sbjct: 627 KELNNAINRLSMLINELQEEVMAMRMVPVAYVFNRFPRMVRDTAKALGKEVEFIMEGTDI 686 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELD+++++ + +PL HL+RN+LDHGIE PE+R GK G L L A+ + ++ I V D Sbjct: 687 ELDRTVLDELAEPLVHLIRNALDHGIEPPEEREKMGKPRKGTLKLIAQRERDHVNIIVED 746 Query: 421 DGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ ++I KA +GL E +SD E LIF PGFSTAE+V++VSGRGVGMDV Sbjct: 747 DGRGIDPDKIRKKAVEKGLISEEEAKKLSDHEAINLIFLPGFSTAEKVSEVSGRGVGMDV 806 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK I+ +GG V + S++G GT + + LPLT++I+ + +++AD+V+ +P+ +V++ Sbjct: 807 VKTKIESLGGSVVVYSEKGKGTRVVLKLPLTMSIITALLLKLADQVYAIPITSVLDVTVV 866 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA--KTEATQGIVVILQSGGRRYALL 595 D+ + G ++ R E +P++ L ++ K + IVVI +S G + ++ Sbjct: 867 NRKDVKNIEGTYSII-YRDEIIPVIWLKDFLGMSHLQDKNKEELTIVVIERSEG-KIGVV 924 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 VD+++G+ +VVK L + +PG++ ATILGDG VALI+D+S Sbjct: 925 VDEVVGREDIVVKTLTGILKNIPGLAGATILGDGRVALILDLS 967 Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 37/122 (30%), Positives = 74/122 (60%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++++ F +EA+E + ++ + LL L+ + + + +N IFR+AH+IKGGA T G S + + Sbjct: 5 MNEYLDVFVEEAEEHIQNINECLLELEKDPSNLDLINQIFRSAHTIKGGARTVGLSHISD 64 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH ME++LD R G++ + ++I+++ E D ++ LD K + + + + ++ Sbjct: 65 LTHHMEDILDYIRNGQIPVTSEIVDMLFECLDALEVMLDEVKSGNTETSVDVNSLIEKIK 124 Query: 125 QL 126 QL Sbjct: 125 QL 126 >UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alphaproteobacteria RepID=B9KS14_RHOSK Length = 655 Score = 295 bits (754), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 168/398 (42%), Positives = 249/398 (62%), Gaps = 17/398 (4%) Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE-LDPVNHGDLITSMGQLQ 311 E T ++RVA E++D L++ VGELVI + L Q + + DP L+ + ++ Sbjct: 258 EATGADKAGATMRVAAERLDHLMDRVGELVIADARLLQLAHQSRDPA----LMAAAEEIS 313 Query: 312 RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 R A L+++ M IRM+P+ + R+ RL+ L+ +GK V ++G TELDK++IE++ Sbjct: 314 RLAAGLRDTTMRIRMVPVRSMVGRFRRLIHGLSEMVGKPVSFVVLGEETELDKTVIEQLA 373 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 DP+ H++RNS+DHG+E P R AAGK + G + L AE G + I ++DDG GLNRERI Sbjct: 374 DPIVHMLRNSVDHGLEAPADRAAAGKPAEGRITLEAEQSGAEVVIRISDDGRGLNRERIR 433 Query: 432 AKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 AKA + G+ + +++ + LI PGFSTAE +T++SGRGVGMDVVK+ I+ + G +E Sbjct: 434 AKAIANGIIGPDAILTESAMNALILEPGFSTAEAITEISGRGVGMDVVKKTIEGLRGSIE 493 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME--SLQP--READLHPLA 546 +QS +G GTT + LPLTLAI++G+ V VA E F +PL AV E L P RE D Sbjct: 494 VQSVEGRGTTFTLRLPLTLAIIEGLLVEVAGERFSIPLAAVQEIVELPPDRREED----- 548 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 G L+VR +P+V L ++F+ G E VVI+++G R +VD++IG +Q+V Sbjct: 549 GSADFLDVRDRLVPLVRLRRIFSSPGMPDEFQT--VVIVRAGETRAGAVVDRIIGTNQIV 606 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 +K + + + S ATILGDG+VALI+DV L + Sbjct: 607 IKQMSRLHGGIRAFSGATILGDGTVALILDVPHLAGVG 644 >UniRef50_A6W0U9 CheA signal transduction histidine kinase n=32 Tax=Gammaproteobacteria RepID=A6W0U9_MARMS Length = 745 Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 169/419 (40%), Positives = 262/419 (62%), Gaps = 13/419 (3%) Query: 230 PKISTPPVLKLAAEQA-PTGRVEREKTTRS--NESTSIRVAVEKVDQLINLVGELVITQS 286 PK ++ PV K A + A P +EKT + + ++RV +++D ++N+VGELV+ ++ Sbjct: 325 PKPASKPVPKPAPKTAEPEADSVKEKTANAPVTQEATVRVDTKRLDDIMNMVGELVLVRN 384 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 L + + + + G + ++ + DLQ +VM RM P++ VF R+PR+VRDLA Sbjct: 385 RLVRLGLQSEDESMGKAVANLDVV---TGDLQNAVMKTRMQPIKKVFGRFPRVVRDLARN 441 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 + K+V L L G T+LDK+L+E + DPL HLVRNS+DHG+E P+ R A+GK VG +ILS Sbjct: 442 MKKEVNLVLRGEETDLDKNLVEALADPLVHLVRNSVDHGVEAPDVREASGKPRVGTVILS 501 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAE 463 AE +G +I + + DDGAG++ + KA +G+ ++ +SD+E LIFAPGFST Sbjct: 502 AEQEGDHILLSIEDDGAGMDPNLLRRKAVEKGVMDADAADRLSDEEAFNLIFAPGFSTKV 561 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 ++TDVSGRGVGMDVVK I ++ G ++I+S G G+ I +PLTLAI+ + V ++D+ Sbjct: 562 EITDVSGRGVGMDVVKTKISQLNGTLQIKSVLGQGSRFIIKVPLTLAIMPTLMVTLSDQA 621 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE--ATQGI 581 F PL +V E + + G++V+ +RG+ LPI L K + + G + T+ Sbjct: 622 FAFPLVSVNEIFHLNLKKTN-VVDGQQVVVIRGKTLPIFHL-KSWLIKGNSKDNLPTEAH 679 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VV++Q G +VDQL+GQ +VV+K L + G++ ATI GDG +ALI+DV ++ Sbjct: 680 VVVVQVGMSEVGFVVDQLVGQEEVVIKPLGKMLQGTAGMAGATITGDGRIALILDVPSM 738 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 7/138 (5%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS ++ + Q F EA E+L + + L+ L+ D + LNAIFR H++KGGAG Sbjct: 1 MSFEVDEEILQDFLVEAGEILEQLSEQLVDLEQNPDDKQLLNAIFRGFHTVKGGAGFLQL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + L + H EN+ D R G+ ++++D++++ L+ D + E D + EP+ AS + I Sbjct: 61 TALVDCCHYAENVFDILRNGQRKIDSDLMDIVLQALDAVNEMFDTVRAGGEPERASPELI 120 Query: 120 CQALRQLALEAKGETPSA 137 AL A + P+A Sbjct: 121 A------ALAAYAKPPTA 132 >UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A1QZZ9_BORT9 Length = 717 Score = 294 bits (752), Expect = 8e-78, Method: Compositional matrix adjust. Identities = 163/391 (41%), Positives = 252/391 (64%), Gaps = 16/391 (4%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 SI+V +K+D L+NLVGELV QS LA+ E + N+ L + + +L++ Sbjct: 335 SIKVDSKKLDHLVNLVGELVTIQSKLAK---EAESSNNNILNSISAEFSLLINELRDYTT 391 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 +R +P+E +F ++ R+V+DL+ +LGK + G T LDKS+IER+ +PL HL+RN++ Sbjct: 392 GLRTVPIEILFVKFQRIVKDLSAQLGKSIRYHSQGGDTVLDKSIIERLNEPLVHLIRNAI 451 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL--- 439 DHGIE E+R+ AGK+ G + LSA G ++ I + DDG GLN+ +I+ +A + + Sbjct: 452 DHGIEPAEERIEAGKDPQGVIKLSAHQSGDSVIIIIEDDGRGLNKRKIIKRAIERYIISD 511 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 VS +SD ++ LIF PGFSTA+ VT+VSGRGVGMDVVK+ ++ + G+V ++S+ G T Sbjct: 512 AVSRTLSDVDIYNLIFEPGFSTADVVTNVSGRGVGMDVVKKQVESLRGNVILESEFGKYT 571 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD--LHPLAGGE---RVLEV 554 I+++ PLTLAI++G VRV DE FI+PL++V L EAD + + G E V+ Sbjct: 572 RIKLIFPLTLAIIEGWLVRVRDEHFIVPLSSVESCL---EADKLMSKVCGFENNSNVMNY 628 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RG + + L + F ++ ++++ +VV SG + ++VD+++GQHQ V+K L Y Sbjct: 629 RGSMISFIRLREFFEISDEESDSEHVVVVNANSG--KIGIVVDEVLGQHQTVIKTLGKIY 686 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINR 645 KV G+S ATILGDGS+AL+VD+ + + R Sbjct: 687 SKVEGVSGATILGDGSLALVVDIDTITKVIR 717 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 9/114 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 I F +F +E+ E ++D+E LL ++ E+ E +N+IFR H+IKG AG FGF++ Sbjct: 7 IDKFKDSFKEESIENISDIEHALLNIEFESG-KEVVNSIFRNFHTIKGSAGMFGFNLTAS 65 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD--------AYKQSQE 110 H +E +LD + G + N D ++ L D ++E ++ AYK ++ Sbjct: 66 LVHEIETVLDPIKEGSDEFNQDTVDATLMAVDFIRELIEGDEAIDESAYKNREK 119 >UniRef50_Q2SBX8 Chemotaxis protein histidine kinase and related kinase n=55 Tax=Gammaproteobacteria RepID=Q2SBX8_HAHCH Length = 824 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 162/386 (41%), Positives = 244/386 (63%), Gaps = 14/386 (3%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 T++RV +++D ++N+VGELV+ ++ L + E N ++++ + DLQ +V Sbjct: 411 TTVRVDTKRLDDIMNMVGELVLVRNRLKRLGEEFADENMSKAVSNLDVV---TSDLQSAV 467 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M RM P++ VF R+PR+VRDLA L K+V L L G T+LDK+L+E + DPL HLVRN+ Sbjct: 468 MQTRMQPIKKVFGRFPRVVRDLARNLRKEVNLVLRGEDTDLDKNLVEALSDPLVHLVRNA 527 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL-- 439 +DHGIE PE R GK VG ++L+AE +G +I + + DDGAG++ + KA +G+ Sbjct: 528 VDHGIESPEAREQKGKPRVGRVVLAAEQEGDHILLSIEDDGAGMDPVVLRQKAVEKGIYD 587 Query: 440 -TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 +E ++D+E LIFAPGFST +++DVSGRGVGMDVVK I ++ G + I+S+ G G Sbjct: 588 VDAAERLTDNEAYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKITQLNGTIHIESELGRG 647 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP--LAGGERVLEVRG 556 + I I +PLTLAI+ + V + D+ F PL +V+E DL + G+ + VR Sbjct: 648 SRIVIKVPLTLAIMPTLMVMLGDQAFAFPLVSVVEIFH---LDLTQTNIVDGQECIVVRE 704 Query: 557 EYLPIVELWKVFNVAGAKTEATQ--GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 P+ + K + V GA+ E T+ G VVI+ G +R +VDQL+GQ +VV+K L Sbjct: 705 NVFPLFHI-KRWLVKGAQFEPTEENGHVVIVSVGTKRVGFVVDQLVGQEEVVIKPLGKML 763 Query: 615 RKVPGISAATILGDGSVALIVDVSAL 640 PG++ ATI GDG +ALI+D+ ++ Sbjct: 764 HGTPGMAGATITGDGRIALILDIPSM 789 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q F EA E+L + + L+ L+ D + LNAIFR H++KGGAG L E Sbjct: 8 EILQDFLVEAGEILEQLSEQLVELEQNPDDRDLLNAIFRGFHTVKGGAGFLQLDALVECC 67 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H+ EN+ D R G++ ++++++++ L+ D + E K +E A+ + + AL +L Sbjct: 68 HVAENVFDLLRNGQLSVDSELMDVVLQALDAVNEMFSQVKMREELTPAAPELMA-ALERL 126 Query: 127 A 127 A Sbjct: 127 A 127 >UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHI1_LEPBA Length = 731 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 157/389 (40%), Positives = 250/389 (64%), Gaps = 8/389 (2%) Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 E++ + +S +I+V +++D LIN VGELV++ + + Q + D N L S + R Sbjct: 333 EQSKETQKSMTIKVDSKRIDNLINRVGELVVSCANMNQLIGDSDDSN---LQESSQMVIR 389 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +++E + +RM+P+ F +Y R+VRDL L K + L G TELD++++E++ D Sbjct: 390 LLNEVREISLKLRMVPIGESFQKYSRIVRDLGKDLQKDIRLITEGDETELDRNIVEKLSD 449 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PLTHLVRN+ DHG+ELPE RL GK G + L+A H+ GN+ IEV+DDG G+++E++ Sbjct: 450 PLTHLVRNACDHGLELPEDRLNVGKPKQGTIRLNAYHEAGNVIIEVSDDGNGISKEKVWK 509 Query: 433 KAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 K +GL E SD+EV L+F PGFSTA Q+T+VSGRGVG+DVV +NI+ + G + + Sbjct: 510 KGIEKGLVTGEIPDSDEEVYKLLFHPGFSTASQITNVSGRGVGLDVVSKNIEALRGTITV 569 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 +S G+ + LPLTLAI++G V V FI+P+ V+E L +D H + Sbjct: 570 KSTPSQGSRFILRLPLTLAIIEGFLVAVGKSHFIIPMEMVLECLH--FSDDHKTESNQ-F 626 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 +RG +P + L K + ++ EA + +VI+++G ++ ++V++L+G++Q V+K + Sbjct: 627 FALRGNLIPFLRL-KDYYPCESEEEAFRENIVIVRNGEKKAGIVVEKLLGEYQTVIKPMG 685 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSAL 640 S +R V G+S ++ILGDG+VALI+DV +L Sbjct: 686 SVFRHVKGVSGSSILGDGNVALIIDVPSL 714 Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/94 (40%), Positives = 54/94 (57%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + E+DELL +ME LL + P + +NAIFRA H+IKG AG FGF Sbjct: 1 MDLTEVIDAYLVESDELLREMEVILLRTESSLPTEDDMNAIFRAVHTIKGTAGMFGFDST 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKD 96 H++ENLLDE R + + + L+ KD Sbjct: 61 VSFAHVVENLLDELRSKTIPFQIPLTEILLKAKD 94 >UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 Tax=Clostridia RepID=B9MM01_ANATD Length = 666 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 156/398 (39%), Positives = 259/398 (65%), Gaps = 8/398 (2%) Query: 247 TGRVEREKTTRSNESTS--IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 T +V R++ S + TS +RV +E++D L+NLV EL+I +S + + + + + + Sbjct: 271 TVKVVRQQKQESLQKTSKTVRVDIERLDVLMNLVSELIIIKSRIEGLAKKYNDRQYEE-- 328 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 S+ L+R L ++VM +RM+P+E VFSR+PR++RDLA +LGK+ EL + G TE+D+ Sbjct: 329 -SIEYLERITTSLHDAVMKVRMVPVERVFSRFPRMMRDLARELGKEFELVMSGEDTEVDR 387 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ + DPL HL+RN+ DHGIE P++R+ GK G + LSA H G N+ IEV DDG G Sbjct: 388 TIVDELGDPLIHLLRNAADHGIEDPDERVKNGKPRSGLIKLSAYHDGNNVVIEVEDDGKG 447 Query: 425 LNRERILAKAASQGLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 ++ E++ KA +GL + +++ E+ +F P FST ++VT++SGRGVG+DVVK I Sbjct: 448 IDLEKVKQKAIEKGLLKEDQIELTEQEIIDFLFMPSFSTKDKVTNLSGRGVGLDVVKTKI 507 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +++GG VE+++++G GT I LPLTLAI+ + V V DE++ +P+ ++ E + + D+ Sbjct: 508 EQLGGMVEVKTQKGKGTKFVIRLPLTLAIIQALLVTVHDEIYAIPVASIREIVDVAKEDI 567 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + G+ ++ +R + +PI L + + + + VVI++ G + ++VD+L+GQ Sbjct: 568 KVVQKGKEIIMLRNQVIPIKHLHSIVGLEPV-LDKKKFTVVIVRRGEKLTGIIVDKLLGQ 626 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +V+K+L V IS ATILGDGSVA+I+D + L Sbjct: 627 QDIVIKSLGKYLEGVRLISGATILGDGSVAMILDPNML 664 Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 66/102 (64%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT GF + Sbjct: 1 MDMSQYLGMFIEEARDHIQSLNDNMLKLEENPEDLQIVNEIFRSAHTLKGMAGTMGFVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA 104 Q+ TH MEN+L AR G++++N +I+++ +T D ++ LD Sbjct: 61 QKLTHAMENVLAAARDGKLKVNPNIMDILFKTVDALESYLDV 102 >UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococcus RepID=Q9UYF4_PYRAB Length = 772 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 158/384 (41%), Positives = 250/384 (65%), Gaps = 13/384 (3%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD--LITSMGQLQ 311 +T R S I++ V +D+L+NLVGELVIT+ L Q L GD L ++ L Sbjct: 382 ETPRVKISRIIKIDVGHLDKLMNLVGELVITKGRLEQIGERL-----GDRELFEALSTLS 436 Query: 312 RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 R +LQ+ +M +R+ P+ VF+++PR+VRDLA K+GK+VE + G+ E+D++++E++ Sbjct: 437 RLLTELQDEIMEMRLTPIAEVFNKFPRMVRDLARKMGKEVEFVMEGADIEVDRTILEKLG 496 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 D L HL+RN++DHGIE PE+R+ GK VG + L A+ + ++ I V DDG G++ E++ Sbjct: 497 DALVHLLRNAVDHGIEPPEERVKLGKPRVGRVELIAKREKNHVVIIVRDDGRGIDPEKVK 556 Query: 432 AKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 KA +GL E ++SD+E LIF PGFSTAE+VTDVSGRGVGMDVVK ++ M G Sbjct: 557 KKAIERGLITPEEAASLSDEEAINLIFLPGFSTAEKVTDVSGRGVGMDVVKEVVKSMNGS 616 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 + +Q++ G GTT + LP+++AI+ + +RV DE + +P+N ++E+++ + L + GG Sbjct: 617 ISVQTEVGKGTTFILKLPISMAIIQALLIRVMDETYAIPINNILETIEVDPSILKTI-GG 675 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 + V+ +RGE +P+V L ++F + + E I+V G ++ A+ VD+L+ + +V+K Sbjct: 676 KPVIVLRGEIIPVVMLHELFGLPTPQVERFPAIIV--DHGAQKVAIGVDELLHKRDIVIK 733 Query: 609 NLESNYRKVPGISAATILGDGSVA 632 +L V G + ATILGDGSV Sbjct: 734 SLGKFLSNVRGFAGATILGDGSVV 757 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 7/112 (6%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGAGT 56 D+S + F +A + + + +L L+ E AE +N IFR AH++KG A T Sbjct: 6 DMSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKAELINQIFRDAHTLKGTAAT 65 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 GF L ET H MENL D R +++L ++++L L+ D ++ ++ ++S Sbjct: 66 MGFMKLSETAHKMENLFDAIRNSQIELTPEVVDLVLDFLDAIEAMVNNIEES 117 >UniRef50_C1A888 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A888_GEMAT Length = 659 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 221/666 (33%), Positives = 342/666 (51%), Gaps = 52/666 (7%) Query: 8 FYQTFFDEADELLADMEQHLLVLQ--PEAPD-AEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F E+ E L +++ LL L+ P +PD + + +FR H+IKG A G++V++ Sbjct: 12 YAALFQSESREHLDELDVALLALERAPASPDVSAHVATLFRGMHTIKGMAAAMGYAVVER 71 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD--AYKQSQEPDAASFDYICQA 122 H +E+ + R G ++ D + L + ++ +D A + D + A Sbjct: 72 LAHALESRCEPLRSGAEPVSVDAMTLLFDGTSALRVSIDRAALGREDTGDEERVTALVAA 131 Query: 123 LRQLA---LEAK-GETPSAVTRLSVVAKSEPQDEQSRSQSPR---RIILSRL------KA 169 LR + L A P+ VT SV A S SR +P R++ RL K Sbjct: 132 LRATSPDGLRASVSGAPAPVTAASVTATSA---TPSRGLTPSVAARVVEIRLSDDCPLKG 188 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 ++ +LG L + + D A D + +VL D + + Sbjct: 189 VRAMIVAAKLGALGQVGQATPPQERWQ-----DDAFDGVFSVLLTSDAGDDALVDAARSA 243 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 ++ V AE A T R ++R+ ++D L++LVGELVI++ L Sbjct: 244 GDVARVQVRAHVAEVASTAAPVR----------TVRLDARRLDTLLDLVGELVISRDRLL 293 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 + ++ + +I + R +QE V+ R+ P+ VF R+PRLVRD+A +LGK Sbjct: 294 RAIEAMEQPDR-QVIAAARDAARLVSVMQEEVLQTRLQPVSQVFDRFPRLVRDVAHELGK 352 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 V + G ELD++L++ I DP+ HL+RN+LDHG+E E R AAGK G LIL A Sbjct: 353 DVNFLMEGREIELDRALLDAIGDPILHLLRNALDHGVEDSETRRAAGKAPAGELILRAAR 412 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGL-TVSE-NMSDDEVAMLIFAPGFSTAEQVTD 467 G I I+V DDG G++R +L +A QGL ++SE ++D+ + L+ GFSTA VT+ Sbjct: 413 DRGTIVIQVQDDGRGIDRLAVLRRAQHQGLVSMSETTLTDEALLPLVSRAGFSTAHAVTN 472 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVG+DVV ++ +GG VE+++ +G GT + LP TLAI + V V E F +P Sbjct: 473 LSGRGVGVDVVSTRVRALGGQVELETLEGEGTVFTLRLPATLAITRALLVEVQGETFAIP 532 Query: 528 LNAVMESLQPREA---DLHPLA------GGERVLEVRGEYLPIVELWKVFNVAGA----K 574 V E+L +A H LA G R + VR E +P+V L + F + + + Sbjct: 533 AVNVEEALAYHDALEVAPHALAAAGHRSAGARAITVRDEIVPLVALDEYFGLDQSSISRR 592 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 E + V ++++GGRR ALLVD L+ Q +VVK L+ P S AT+LGDG+ ALI Sbjct: 593 GEDRERHVALVEAGGRRAALLVDALVAQQDIVVKPLDVVQGAAPWFSGATVLGDGTPALI 652 Query: 635 VDVSAL 640 VDV+++ Sbjct: 653 VDVASI 658 >UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQS8_ACIBL Length = 727 Score = 292 bits (748), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 156/392 (39%), Positives = 260/392 (66%), Gaps = 22/392 (5%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSEL------DPVN--HGDLITSMGQLQRNAR 315 +RV +++D ++NLVGEL+I +SML Q S+ DP+ D + Q+ Sbjct: 323 LRVDADRIDTVLNLVGELIINKSMLNQTLSDFGKQHAKDPLKARFADAMAFQAQI---LN 379 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +LQ +VM IRM+P+E +F R+PR+VRD+A GK+ +L + G +T+LDKS+++ + +P+ Sbjct: 380 ELQRAVMKIRMVPVEQLFRRFPRIVRDVARSSGKECDLIISGQNTDLDKSILDALSEPMM 439 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RN++DHGIELP R+AAGK+ G L L+A +QG + IE+TDDGAG++R+R++ KA Sbjct: 440 HLIRNAVDHGIELPAARIAAGKSVKGTLKLNAFYQGNQVVIELTDDGAGIDRDRVVEKAI 499 Query: 436 SQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 + +E ++D + LIF PG STA QVT++SGRG+GMD+V+ ++++ G + IQ Sbjct: 500 ENNIVSEKEAEKLTDQDALNLIFRPGLSTATQVTEISGRGMGMDIVESVLRRLKGSIGIQ 559 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 +++G GTT ++ +PLTLAI+ + R A+ ++ +PL +V+E + +H + E VL Sbjct: 560 TEKGRGTTFQLRVPLTLAIMQALLFRAANRLYAVPLGSVVEIARATSQHIHVVDHHE-VL 618 Query: 553 EVRGEYLPIVELWKVFNVAGAK----TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 ++R + + +V L K + G K +E + VV++Q G RR+ ++VD+L+G+ ++V+K Sbjct: 619 QLREQIVTLVRLDK---LEGRKRQPQSEKHKVFVVVVQLGDRRFGMVVDKLVGEEELVIK 675 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L+ N +S A+ILGDG V LI++V+++ Sbjct: 676 ALDDNLVATDLVSGASILGDGKVVLILNVASV 707 Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 FF+ A ELL + L L+ DAE + I R H++KG + GF L E H +EN Sbjct: 16 FFESAQELLQALNDEGLELERHPNDAEIVRDIRRTVHTLKGDSAACGFKELSELAHELEN 75 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 L N ++ L L D L AY+++ Sbjct: 76 ALTPEITHAASGN--LVELVLNAADTFDSLLTAYQRN 110 >UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYB2_BRAHW Length = 796 Score = 292 bits (747), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 140/332 (42%), Positives = 228/332 (68%), Gaps = 2/332 (0%) Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 L R +LQE+VM IRM+P+ F+R+PRL+RDL+ LGK+V+L + G TELDKS+IE Sbjct: 425 LTRVTNELQETVMKIRMLPIAQTFNRFPRLIRDLSRDLGKEVKLEMYGEETELDKSVIEV 484 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 ++DPL H++RN++DHGIE P++R AGK G ++LSA H+G I I+++DDG G+ ++ Sbjct: 485 LVDPLVHIIRNAMDHGIEHPDEREKAGKPRTGTVVLSASHEGNLIIIKISDDGKGMIPQK 544 Query: 430 ILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 I A +GL ++ +S+ ++ IFAPGFSTA ++T+VSGRGVGMDVVK++++K+ G Sbjct: 545 IFESAVKKGLVSADAKLSERQMLEYIFAPGFSTAAKITNVSGRGVGMDVVKKSLEKINGT 604 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 V I+++ G G+T + +PLT+AI+ + V E + +P+N+++E+++ D+ L G Sbjct: 605 VGIETEWGKGSTFFLRIPLTVAIIQALIVDAEKEYYAVPINSILETVKIDVKDIQELEGI 664 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 E V++VR + + ++ + ++F + VIL S G++ ALLV+ LIG+ +V+K Sbjct: 665 E-VIKVRDDVINVLSIKELFRLPSRYNNIKSYYAVILSSEGKKVALLVNNLIGEQDIVIK 723 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L+ N K G++ AT+LGDG+V+ I+D+ + Sbjct: 724 TLKDNITKSEGLAGATVLGDGTVSFILDIQTI 755 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/106 (31%), Positives = 61/106 (57%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 I + FF+EA E+L +EQ++L+L E + + + IFRA H++KG AG Q+ Sbjct: 5 IKSLLKDFFEEAFEMLDRLEQNILILDNERNNVDAIQEIFRAVHTLKGSAGAVELVETQK 64 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 H E+LLD R +++++ I++ L+ DI+++ ++ + E Sbjct: 65 YAHRFEDLLDLIRNNKIEVDDATIDVLLKGIDILKDLINTASEESE 110 >UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L008_9DELT Length = 723 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 167/393 (42%), Positives = 246/393 (62%), Gaps = 19/393 (4%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQ 318 + ++RV ++D ++ + GELVI QS L Q ++ +LD D L+R ++ Sbjct: 328 AATLRVDAARLDSVVTMAGELVILQSRLRQAVQARDLDAAAAVD-----EDLERLTDAMR 382 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 + + +RM+P+ VFS++ RL+RDL+ LGK+V+ +G TELDK++I+RI DPL HL+ Sbjct: 383 DVALGLRMLPIGTVFSQFTRLLRDLSASLGKEVDFEALGGDTELDKTVIDRIKDPLVHLL 442 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RNSLDHG+E P+ R AGK G + LSA H GGN+ I + DDG G++ + KA +G Sbjct: 443 RNSLDHGVEPPDARQRAGKTPHGRVTLSASHSGGNVVISIIDDGRGIDPAVVRQKAVERG 502 Query: 439 LTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 L + + S+ E+ LIFAPGFSTA ++DVSGRGVGMDVVKRNI+ + G VE++S G Sbjct: 503 LLAPDADPSEKELFDLIFAPGFSTAAAISDVSGRGVGMDVVKRNIEALRGTVEVESVLGR 562 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV---LEV 554 GTT+ I LPLTLAI+DG +V V + FI+PL + Q R + G R +E Sbjct: 563 GTTVTIKLPLTLAIIDGFNVVVGRDSFIVPL-VTLRGFQERF-----VTGEARTVENMER 616 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 G+ +P+V L ++F+V G + + VV+ + G VD+++G+ Q V+K+L++ Y Sbjct: 617 MGDLIPVVSLRRLFSVPGEQPGYER--VVVTEVEGEMVGFCVDRVVGRQQAVIKSLDTCY 674 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINREQ 647 R + IS TI GDGS++LI+DV L R Q Sbjct: 675 RHLKWISGTTINGDGSISLILDVPQLVRFVRGQ 707 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 48/83 (57%) Query: 30 LQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIIN 89 L+ + D E ++A FRA H+IKGG FGF + TH +E + D R G++ + ++++ Sbjct: 29 LEKDPTDMEGVDACFRAMHTIKGGGAMFGFEEISRFTHDVETVYDRVRSGQLTVTRELLS 88 Query: 90 LFLETKDIMQEQLDAYKQSQEPD 112 L L KD + LDA ++ P+ Sbjct: 89 LTLAAKDHILALLDAPAEAVGPE 111 >UniRef50_A0LIT5 CheA signal transduction histidine kinases n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LIT5_SYNFM Length = 1195 Score = 291 bits (746), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 165/409 (40%), Positives = 250/409 (61%), Gaps = 24/409 (5%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-----DPVNHGDLIT---------- 305 S+++RV +KVDQL+N VGELV+T+S Q S+ + V G L Sbjct: 774 SSTLRVDAQKVDQLLNQVGELVVTRSEFIQFSTSFRDMLREIVAQGKLTKQEVRRLRAFS 833 Query: 306 -----SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 S L R A DLQ+SVM IRM+P+ ++F R+PR+VRD + KLGK+VEL + G T Sbjct: 834 FRLNESTISLGRVANDLQDSVMRIRMLPISFLFQRFPRVVRDQSLKLGKKVELLVEGGET 893 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK ++E++ DP+ +RN++ HGIE PE+R A K G + LSA HQG + +++ D Sbjct: 894 EIDKRVLEQMNDPIVQFLRNAIAHGIETPEERKRASKPETGMIRLSAFHQGDYVTLQIED 953 Query: 421 DGAGLNRER---ILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ ++ IL + E +SD E+ IF PG ST E V + +GRGVG+DV Sbjct: 954 DGRGIDTKKLRTILEERRELSTHELERLSDQELMYAIFLPGVSTHEGVDETAGRGVGLDV 1013 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK N+++M G +E++S G GT I +PLT+AI+ + V+ A ++F +PL+ V E L+ Sbjct: 1014 VKENVERMNGAIEVESYAGLGTRFTIKIPLTVAIIRALLVKGAQQIFTIPLSTVSEILRY 1073 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 E H + G E V+ +RG+ +P+V + K+ ++ E +VI+ + R L+VD Sbjct: 1074 TEDATHTIEGFE-VISLRGKTIPLVHIGKLLKMSSVVDENEHRSIVIVATSFREVGLVVD 1132 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 L+G+ +VV+K LE K G S AT+LGDG+V+LI+DVS+L I ++ Sbjct: 1133 GLLGEREVVIKPLEDGVHKFDGFSGATLLGDGTVSLILDVSSLLRIMKD 1181 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 3/104 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 DF Q + +E E L ++E LLVL+ E + E++N IFRAAHSIKG + G L T Sbjct: 41 DFLQEYVEEVKEHLQELEHSLLVLEKEGTNKEEINQIFRAAHSIKGASAYMGLEGLANLT 100 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 H +E+L+ E + + + I + L D + +A +Q QE Sbjct: 101 HRLESLISEIQSQSRPVPPEGITVMLSCVDFVA---NAVRQLQE 141 >UniRef50_Q2RZD1 Chemotaxis histidine kinase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RZD1_SALRD Length = 546 Score = 291 bits (745), Expect = 5e-77, Method: Compositional matrix adjust. Identities = 171/406 (42%), Positives = 249/406 (61%), Gaps = 30/406 (7%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSE----------------LDPVNHGDLITS 306 +IRV V +++QL++LVGELV+ ++ L Q +E LD + G+L + Sbjct: 116 TIRVEVSRLNQLMDLVGELVLGRNRLLQLITEARTEHDARADTDERLRLDSL-LGELEEA 174 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 ++ +LQ ++M RM+ + VF ++PR+VRDLA + KQ++LT+ G TELDKSL Sbjct: 175 SDKVDYTTTELQSAIMQTRMVEVGQVFGKFPRVVRDLAREFDKQIDLTVEGEDTELDKSL 234 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E I DPL HLVRN+ DHGIE PE+R GK+ G + LSA H G +I IE+ DDGAGL+ Sbjct: 235 VEEIGDPLLHLVRNAADHGIEPPEERKEKGKDPRGEIHLSASHAGNHIIIEIADDGAGLD 294 Query: 427 RERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + + KA + + + ++SD E LIF PGFST E+V VSGRGVGMDVVK N+ Sbjct: 295 PDALRRKAIEKDVLTEDEATDLSDSEAYQLIFRPGFSTTEEVGQVSGRGVGMDVVKTNLA 354 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++ G ++I S G GT + LPLTLAIL M VR E F +PL AV E+++ + Sbjct: 355 ELNGTIDIDSTPGEGTRFTLKLPLTLAILQSMLVRSGAETFAIPLYAVSEAVRLEPGMIE 414 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNV----AGAK-----TEATQGIVVILQSGGRRYAL 594 + GE V+E R + +P++ L +V +V AG + TE V++ RR AL Sbjct: 415 TIQEGE-VIEHRDQVIPVMRLGEVLDVQSPGAGGQRADRFTEEQDAYAVVVNVAHRRAAL 473 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +VD+LI Q +VV+K+L + VPGI+ +TILGDG V +++D+ + Sbjct: 474 VVDELISQEEVVIKSLGDYLKSVPGIAGSTILGDGQVIMVLDIGEM 519 >UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Tax=Actinomycetales RepID=A6W4R5_KINRD Length = 822 Score = 291 bits (744), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 160/391 (40%), Positives = 250/391 (63%), Gaps = 11/391 (2%) Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 S ++IRV VE ++ L+ GELV+ ++ + QR+ L DL + +L A ++ Sbjct: 253 SAAESTIRVDVELLESLVRQAGELVLARNQILQRAGAL---RDEDLTRACHRLNLVASEM 309 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QESVM RM +++++S+ PR+VRDL L ++++L + G TELD++L+E + DPLTH+ Sbjct: 310 QESVMRTRMQAIDHLWSKLPRVVRDLGNMLNRKIKLEMEGGDTELDRTLLEAVKDPLTHI 369 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN++DHGIE PE R AAGKN VG L L A H+GG + +E+ DDG G++ I AKA + Sbjct: 370 VRNAVDHGIESPEVRTAAGKNEVGTLKLRAAHEGGQVVVEIRDDGKGIDPTIIGAKAVEK 429 Query: 438 GLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 GL + E+++ +++ +F PGFSTA +VT+VSGRGVGMDVVK NI+++GG V+++S Sbjct: 430 GLVSAAKLESLTPNDILQFLFLPGFSTAAKVTNVSGRGVGMDVVKTNIERIGGSVDVESV 489 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ---PREADLHPLAGGERV 551 G GT R+ +PLTLAI+ ++V A + + +P ++E + R + GG +V Sbjct: 490 VGQGTVWRLRIPLTLAIVPALTVECAGQRYAMPQVNLLELVSLDTERMSKAIEDVGGAKV 549 Query: 552 LEVRGEYLPIVELWKVFNVA-GAKTE-ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 +RG LP++ L + + A E T ++ +L+ GRR+ LLVD+++ ++VVK Sbjct: 550 YRLRGALLPLIRLEEALELKRPADVELPTNLVIAVLECDGRRFGLLVDRVLDTEEIVVKP 609 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSAL 640 L + + + ATILGDG V+LI+DV +L Sbjct: 610 LSGALKAIGAYAGATILGDGRVSLILDVQSL 640 >UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Tax=Halobacteriaceae RepID=C7NUW2_HALUD Length = 670 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 213/680 (31%), Positives = 354/680 (52%), Gaps = 61/680 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F E++E + ++ LL L+ + D +++IFR AH++KG G GF + H Sbjct: 5 YLDAFIRESEEAITELNNSLLELESDPSDQAAMDSIFRTAHTLKGNFGAMGFDDASDLAH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI--CQALRQ 125 +E+LLD R+G+M + +I++L D ++ + + + EP A + D + +A+ + Sbjct: 65 AIEDLLDAIRQGDMDVTPEIMDLVFAGVDDIEAIVTEIEANGEPSADTADRVEDIRAVME 124 Query: 126 LALEAKG----ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 +A G + S+ + V A +E S IL R VD+ E E G Sbjct: 125 DGPDAAGAASDDGRSSGSDGDVDAGAEGDTSASGPSIDVEPILDR-----VDVPEPESGT 179 Query: 182 LTTLTDV-VKGAD--SLSAILPGDIAED--DITA---------------VLCFVIEADQI 221 + TL DV + G D + A+L D ED D+ A AD+ Sbjct: 180 V-TLADVDIGGGDMQGVDAMLALDAIEDALDVVATDPSTDEIENGVFDETFAVFAAADES 238 Query: 222 TFETV--EVSPKISTPPVLKLAAEQAPTGRVEREKTTRS----------------NESTS 263 T +V P + + V ++ A + T +E S Sbjct: 239 TVRAAVDDVGP-VESATVQDVSEAVAAADTADETGATDDAGTSASTSSSASETAVDEIKS 297 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 +RV V+++D L LV +LV ++ L +R++E + V+ ++ +L + LQ +VM Sbjct: 298 VRVDVDQLDDLHGLVEQLVTSRIKL-RRAAEQNNVDS--TGETLNELDKITASLQNTVMD 354 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +R++P+ V ++PRLVRDL+ LGK+++ ++ G ELD++++ I DPL H++RN++D Sbjct: 355 MRLIPLGKVVGKFPRLVRDLSRDLGKEIDFSIEGEDIELDRTILTEISDPLMHILRNAVD 414 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HGIE P +R GK+ G++ L A + ++ I V DDGAGL+ E I +A QG+ ++ Sbjct: 415 HGIEPPAERERKGKSREGSIELRARRERDHVVISVEDDGAGLDVEAIREQARKQGIRSAD 474 Query: 444 N---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 M D + L F PGFSTAE+VT SGRGVGMDVV + ++ G V ++S+ GTT Sbjct: 475 ELDRMDDSAIYDLTFHPGFSTAEEVTGTSGRGVGMDVVHETVSQLDGSVNVESEPDEGTT 534 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 + + LP+T+AI+ + ++V DE + +P+ V E EA + G E V++ E P Sbjct: 535 VSLRLPVTMAIVKVLFIQVGDEQYGIPIKNVDEITDAGEA--REINGNE-VIKHNDEIYP 591 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 I+ L + F+V G +T G+++ ++ R+ AL D++ Q +VVVK LE PG+ Sbjct: 592 IIHLDEAFDVPGERTNG-DGMLIRVRESERKVALHCDEVNSQEEVVVKPLEGLLSGTPGL 650 Query: 621 SAATILGDGSVALIVDVSAL 640 S ++GDG++ I+DV L Sbjct: 651 SGTAVIGDGNIVHILDVVTL 670 >UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia RepID=B7J2C9_BORBZ Length = 714 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 161/395 (40%), Positives = 251/395 (63%), Gaps = 11/395 (2%) Query: 252 REKTTRSNES-TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 ++ T RS + SI+V +K+D L+NLVGELV QS L S E + N L + + Sbjct: 320 QDDTARSKVNIASIKVDSKKLDHLVNLVGELVTIQSKL---SKEAENRNSNILNSISAEF 376 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 +L++ +R +P+E +F ++ R+V+DL+ LGK + G T LDKS+IE++ Sbjct: 377 SLLINELRDYTTGLRTVPIEILFVKFQRIVKDLSTSLGKSILYHASGGDTVLDKSIIEKL 436 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 +PL HL+RNS+DHGIE ++R + GK+ G + LSA G ++ + + DDG GL++ +I Sbjct: 437 NEPLVHLIRNSIDHGIESAQERESLGKDPKGIIKLSACQSGDSVIVIIEDDGRGLDKNKI 496 Query: 431 LAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 L KA + + +V++ +S+ +V LIF PGFSTA VTD+SGRGVGMDVVK+ ++ + G Sbjct: 497 LKKAIERNIISDSVAKTLSEIDVYNLIFEPGFSTASSVTDISGRGVGMDVVKKQVESLRG 556 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE--ADLHPL 545 HV ++S+ G T I+++ PLTLAI++G VRV DE FI+PL+ V L+ + + + + Sbjct: 557 HVVLESEFGKYTRIKLIFPLTLAIIEGWLVRVKDEHFIVPLSNVESCLESNKLISQMDGI 616 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 V+ RG + + L + F V+ K+ + Q +VV SG + ++VD+++GQHQ Sbjct: 617 ETKSNVMNYRGSMISYIRLREFFQVSSEKSLSEQVVVVNTNSG--KMGIVVDEVLGQHQT 674 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V+K L Y +V G+S ATILGDGS+AL+VD+ A+ Sbjct: 675 VIKALGKIYSRVEGVSGATILGDGSLALVVDIDAI 709 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 5/102 (4%) Query: 3 MDISD----FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MD SD F +F +E+ E ++D+EQ LL L+ + D + +N+IFR H+IKG +G FG Sbjct: 1 MDSSDVIDKFKNSFKEESIENISDIEQALLNLEV-SSDQDIVNSIFRNLHTIKGSSGMFG 59 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 F+ H +E +LD + G+ N I+ L + D ++E Sbjct: 60 FNFTASLVHEIETVLDVVKNGKAAFNQAAIDATLMSVDFIRE 101 >UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=Q8PX97_METMA Length = 671 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 151/394 (38%), Positives = 252/394 (63%), Gaps = 11/394 (2%) Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 +E T+S + S RV+ EK+D+L+NLVGELVI +S + + + +L DL ++ Q Sbjct: 283 KEVKTQSPKIHSSRVSTEKLDKLMNLVGELVINRSRVKELTGKL---KSKDLDFALSDYQ 339 Query: 312 RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 + R+LQE V+ IRM+P++++ + +PR++RDLA K+++ + G ++D+++IE I Sbjct: 340 KLTRELQEEVLEIRMIPLDHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIG 399 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 DPL HL+RN++DHGIE PEKR+ GK G +I++A Q + I + DDG G++ E I Sbjct: 400 DPLVHLLRNAVDHGIETPEKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEI- 458 Query: 432 AKAASQGLTVS----ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 K A Q +S E +S+ E+ LIF PG STA +VTD+SGRGVGMD+VK I+ +GG Sbjct: 459 RKIAFQRRLISRDEAEQLSERELIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGG 518 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 +++ SK GTG+ + LP+T+A+ M V+V E + +P +++S+ R+ D+ + Sbjct: 519 SIKVDSKPGTGSRFELRLPITIALCQSMLVKVGMERYAIPFTNIIKSISVRKKDVRHIRS 578 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 E +L + + LP++ L K+F + + E IV++ + G+ L+VD L+G+ ++++ Sbjct: 579 EEVIL-INEKTLPLLRLRKLFQLPAIENEENLDIVIV-EKAGQYIGLVVDSLLGKQEIII 636 Query: 608 KNLESN-YRKVPGISAATILGDGSVALIVDVSAL 640 K +S K G + AT++GDGSV LI+D++++ Sbjct: 637 KTFKSRLLEKTRGFAGATVMGDGSVILILDINSI 670 Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 62/97 (63%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + +M LL L+ +AEQ+N +FR+AH+ KG A T GF + Sbjct: 1 MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 E TH ME+L+D +R G++ L++ +I++ E D ++ Sbjct: 61 VELTHEMESLIDRSRTGKLTLDSYLIDILFECLDTLE 97 >UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermococcus RepID=B6YX73_THEON Length = 781 Score = 288 bits (738), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 159/402 (39%), Positives = 261/402 (64%), Gaps = 10/402 (2%) Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 AE P +++ +T + S I+V V +D+L+NLVGELVIT+ L Q + L Sbjct: 379 AESKPQ-KLKTVQTPKVKVSKIIKVDVSHLDRLMNLVGELVITKGRLEQIAERL---GDR 434 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L+ ++ L R +LQ+ +M +R+ P+ VF+++PR+VR+LA K+GK+VE + G+ E Sbjct: 435 ELLETLSTLSRLLTELQDEIMEMRLTPVAEVFNKFPRMVRELARKMGKEVEFIVEGADIE 494 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +D+++++++ D L HL+RN++DHGIE P++R GK G L L A+ + ++ I V DD Sbjct: 495 VDRTILDKLGDVLVHLLRNAIDHGIESPDEREKLGKPRTGKLELIAKRERSHVEIIVRDD 554 Query: 422 GAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 G G++ E+I KA +GL E MSD+E LIF PGFST EQVTDVSGRGVGMDVV Sbjct: 555 GRGIDPEKIKRKAIEKGLITPERAAEMSDEEAINLIFLPGFSTKEQVTDVSGRGVGMDVV 614 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 K ++ + G + +QS+ G G+T + LP+++AI+ + + V EV+ +P+N ++ES++ + Sbjct: 615 KDVVKSLNGTISVQSEVGKGSTFILKLPVSMAIIQALLIEVQGEVYAVPINNILESIEIK 674 Query: 539 EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 +L + GG+ V+ +RGE +P++ L ++F + + + IVV L G ++ A+ VD+ Sbjct: 675 RENLKSI-GGKDVIVLRGEIIPVIMLHELFGLPIPEKDEFPAIVVDL--GAQKVAIGVDE 731 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L+ + +V+K+L + G + ATILGDGSV LI++++ L Sbjct: 732 LLHKKDIVIKSLGKMLSHISGFAGATILGDGSVVLIIEINGL 773 Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 7/112 (6%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGAGT 56 D+S + F +A + + + +L L+ E ++ IFR AH++KG A T Sbjct: 3 DLSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKKAMIDQIFRDAHTLKGTAAT 62 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 GF L E H MENL D R G+++ D+I++ LE D+++ +D+ +++ Sbjct: 63 MGFMKLSEVAHKMENLFDLVRGGKIEPTPDLIDVLLEFLDVIEGMVDSIEEN 114 >UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Tax=Chromatiales RepID=B9ZR99_9GAMM Length = 715 Score = 288 bits (736), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 160/382 (41%), Positives = 237/382 (62%), Gaps = 9/382 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQ-RSSELDPVNHGDLITSMGQLQRNARDLQESV 321 S+RV E++D+++NLVGELV+ ++ L+ R+ +D +L ++ L DLQ SV Sbjct: 316 SVRVNTERLDEIMNLVGELVLVRNRLSMLRTQHVD----DELGKAISSLALVTSDLQTSV 371 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M RM P+ VF+R+PR++RDL+ LGK++EL + G T+LDK+L+E + DPL HLVRN+ Sbjct: 372 MKTRMQPVNKVFNRFPRVIRDLSRSLGKEIELEIFGEDTDLDKNLVEALSDPLVHLVRNA 431 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL-- 439 +DHGIE PE R AGK G ++L A +G +I + + DDG G++ + K +GL Sbjct: 432 VDHGIETPEVREKAGKPRKGTVVLGAAQEGDHIALLIKDDGGGMDPHALRRKVVEKGLME 491 Query: 440 -TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 ++E M+D E +IF GFST +++DVSGRGVGMDVVK I ++ G +EI S+ G G Sbjct: 492 PAMAERMTDREAFNVIFMAGFSTKTEISDVSGRGVGMDVVKTKISQLNGTIEIDSEIGVG 551 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 TT+R+ LPLTLAIL + V + F +PL +V E L H + V+ VR + Sbjct: 552 TTLRVKLPLTLAILPALMVILDGRRFAIPLASVSEILDLDLTKTH-YVDDQEVIVVRNQA 610 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP+ L + + VV++ + R+ L+VD L+GQ +VV+K L N + V Sbjct: 611 LPVHYLKRWLKPGFVPEAKAESHVVVVHTADRKVGLVVDDLVGQEEVVIKPLGQNLQGVK 670 Query: 619 GISAATILGDGSVALIVDVSAL 640 G++ ATI GDG +ALI+DV+ L Sbjct: 671 GLAGATITGDGGIALILDVADL 692 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 2/128 (1%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M++D +D Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MAIDPNDEILQDFLIEAGELLEGLNEQLIDLEQHPDDRDLLNAVFRSFHTIKGGAGFLSL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E++ + R GE Q++ +++ L D + + +P A D + Sbjct: 61 DPLVTVCHHAEDVFNLLRNGERQVDGHLMDTMLRVLDTLNVMFGDLRSGVDPTPAEADLV 120 Query: 120 CQALRQLA 127 + LR++A Sbjct: 121 -EDLRRMA 127 >UniRef50_B1M893 CheA signal transduction histidine kinase n=11 Tax=Alphaproteobacteria RepID=B1M893_METRJ Length = 714 Score = 287 bits (735), Expect = 8e-76, Method: Compositional matrix adjust. Identities = 168/388 (43%), Positives = 242/388 (62%), Gaps = 22/388 (5%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSS-ELDPVNHGDLITSMGQLQRNARDLQE 319 ++S+RV E++D+L++ VGELVI Q+ L Q + DP L T +++R + L++ Sbjct: 319 ASSVRVEAERLDELMDRVGELVIAQARLGQLAGLHADP----GLKTVAEEIERLSARLRD 374 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 + MSIRM+ + +F R+ RLV DLA LGK VE G TELDK++IER+ DPL HL+R Sbjct: 375 TTMSIRMVAIGALFGRFRRLVHDLARDLGKPVEFVTGGEETELDKTVIERLADPLVHLIR 434 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 N++DHGIE P +R AA K + G + L+AEH G + + V DDGAGL+ RI AKA +GL Sbjct: 435 NAIDHGIEAPARRAAAAKPATGRITLTAEHVGAQVLVSVRDDGAGLDAARIRAKAEERGL 494 Query: 440 TV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 +SD ++ +FAPGFSTA ++ +SGRGVGMDVVK+ I+ + G ++I ++ G G Sbjct: 495 CAPGAVLSDQQIYQFLFAPGFSTAPTISALSGRGVGMDVVKKTIESLRGTIDITTEPGGG 554 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER------VL 552 T + + LPLTLAI++G+ +RV +++PL AV E + L GER L Sbjct: 555 TCVALRLPLTLAIIEGLLIRVGAGRYVIPLAAVEECVA--------LPAGERGGRGRDFL 606 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 +RG +P + L +F G E + V+++ +G R L+ DQ+IG HQ V+K+L Sbjct: 607 NIRGALVPFLRLRDLFGAPGEPEEHQK--VIVVSAGEARVGLVADQIIGNHQTVIKSLSK 664 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + V S ATILGDG+ ALIVDV L Sbjct: 665 LHADVATFSGATILGDGTAALIVDVGRL 692 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 6/113 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M D + F EA ELLA +E LL L D ++ FRA H+IKG FGF + Sbjct: 1 MTALDPAEIFRAEAAELLACLETTLLDLGDRPEDRTLIDTAFRALHTIKGSGAMFGFEQV 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 TH E D RRGE+ + D++N+ L KD ++ + +EP+A++ Sbjct: 61 AAFTHDFETAFDRVRRGEVPVGRDLVNVSLSAKDFIRGLI------EEPEASA 107 >UniRef50_B9MPE2 Putative CheA signal transduction histidine kinase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MPE2_ANATD Length = 556 Score = 286 bits (731), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 143/386 (37%), Positives = 250/386 (64%), Gaps = 13/386 (3%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQ----LQRN 313 S+R+ + K++ L NL GEL+ +S L Q + N D LI+++ + L+R Sbjct: 160 SVRIDINKLNNLTNLAGELITCKSQLNQILNAFKETNIKDKTLSNLISNLEKGILRLERI 219 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 + D+QE + S+R++P++ V + PR+VR++A K GK+VEL + G TE+DK ++E+I DP Sbjct: 220 SFDIQEGITSLRLLPIKNVLRKLPRIVREVAQKEGKEVELIIKGEETEIDKIILEKITDP 279 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HLVRN ++HGIE PE+R+A GK G +++ A +G NI + V DDG G++ +++ K Sbjct: 280 LVHLVRNCVNHGIEKPEERIAKGKRPQGRILIEAYAEGENIYVNVEDDGKGIDIDKVKEK 339 Query: 434 AASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 A +G+ E MSDDE+ IF PGFSTA+++ DV+GRGVGMDVVK+N+ ++ G ++ Sbjct: 340 ALLKGIVTKDEIERMSDDEIIEFIFLPGFSTADKINDVAGRGVGMDVVKKNLSELKGEIK 399 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 +++++ GT+ +++PLT+AI+ + V D++++LPL V+E+++ R+ + + G+ Sbjct: 400 VKTEKDKGTSFLMIIPLTVAIIKTLLVLAGDKLYLLPLEKVVETVKIRKDSIKSIT-GKM 458 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 V ++GE +P L ++ ++ + + +I++ + ++VD+L+G++ VVVK L Sbjct: 459 VCSIKGEIVPFFSLQEILGYQKSEDDRSYYFGIIVKYRESKVGIIVDRLMGEYDVVVKPL 518 Query: 611 ESNYRKVPGISAATILGDGSVALIVD 636 + V G+ +TILGDG V L+++ Sbjct: 519 DQFVGNVKGVVGSTILGDGKVVLLLE 544 >UniRef50_B3EBI4 CheA signal transduction histidine kinase n=1 Tax=Geobacter lovleyi SZ RepID=B3EBI4_GEOLS Length = 536 Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 170/415 (40%), Positives = 249/415 (60%), Gaps = 14/415 (3%) Query: 235 PPVLKLAAEQAP----TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 P V++ A P T V E++ S + +RV +K+DQLINLV ELV S L Sbjct: 129 PDVIEAAVPAEPDLLQTDEVNTEESAASQKV--VRVDAQKLDQLINLVVELVTASSEL-- 184 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 S + + S + + +QE M RM+P+ +F R+ RLV DLA GK+ Sbjct: 185 -ESHVKQTGDNASLESAAAVSLLVKKIQERAMVFRMVPVGDLFRRFQRLVHDLAASSGKK 243 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 ++L + G+ TELDK + ER+ +PL HL+RN++DHGIE P +R AAGK + G + ++A + Sbjct: 244 IQLIIAGADTELDKVMAERLREPLVHLIRNAIDHGIEPPAERQAAGKPATGTIRMNAFQE 303 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 G+I IEV DDG G+ RER+L +A +GL + D + LIF PGFST E+ T +SG Sbjct: 304 AGSIVIEVRDDGRGICRERVLQRAVERGLIRPLEVVDRDPLALIFEPGFSTTEEATLLSG 363 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVKR I+++ G +++ S +G G ++ LPL+LA++DG V V ++ +ILP++ Sbjct: 364 RGVGMDVVKRTIEELRGKIDVTSSEGQGACFQLRLPLSLALIDGFMVTVGNDAYILPMDL 423 Query: 531 VMESLQ-PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 V E++ P EA L G L +RGE LP ++L + V A +V+++ G Sbjct: 424 VDETIDLPAEAAAGLLLRG--YLNIRGEALPCLDLRDI--VKPAVPAPLSRFIVVVKQDG 479 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 RR L VD L+G+ + V+K L YR IS ATILGDG++ALI+D+ L I+ Sbjct: 480 RRIGLAVDVLVGEVKAVIKPLGRLYRDARIISGATILGDGTIALILDLPELLRIH 534 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 30/106 (28%), Positives = 58/106 (54%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++++ + F E+ E+LA+ME LL L+ + N +FRA H+IKG A ++ Sbjct: 4 ELAEIREAFALESVEMLAEMESALLALETVPALGDDFNRLFRAVHTIKGSASIVSADQVE 63 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ 109 H +E+LL + R E+ L ++ L L+ D ++ + A++ ++ Sbjct: 64 AFCHALEHLLVKVREHELPLTKELFTLCLQCHDHIRNLIVAFESAE 109 >UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD0_LARHH Length = 616 Score = 285 bits (729), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 178/421 (42%), Positives = 254/421 (60%), Gaps = 24/421 (5%) Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 S+PP P +R + E+T IR+ +++DQ++NL GE+ +T++ L Sbjct: 193 SSPP---------PAQSRDRSPASSPQEAT-IRIDTQRLDQVLNLSGEIGLTKNRLTTIR 242 Query: 293 SELDPVNHG-----DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 +E+ N G L ++ QL DLQ +VM RM P+ +F +YPRL RDLA +L Sbjct: 243 TEIMQGNLGANTLRSLDEAVSQLDLLVGDLQNAVMKTRMQPIGRLFQKYPRLARDLARQL 302 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK+VEL L G TELDK++IE + DPL HLVRN++DHGIE PE+RLAAGK++ + LSA Sbjct: 303 GKEVELVLSGEETELDKTMIEDLNDPLVHLVRNAVDHGIETPEERLAAGKSAQSIVELSA 362 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAM-LIFAPGFSTAEQ 464 + G +I IEV DDG G+N + KA +GL E N DD+ A+ LIF PGFST +Q Sbjct: 363 QQVGDHIVIEVADDGRGMNAGMLRKKALEKGLIDLEQANSLDDKQALHLIFLPGFSTKDQ 422 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 ++ VSGRGVGMDVV+ NIQK+ G ++I S GT I I LPLTLAIL + V+V ++ F Sbjct: 423 ISSVSGRGVGMDVVRTNIQKLNGRIDISSAPNEGTKISISLPLTLAILPVLVVKVCNQPF 482 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 +PL V E + P +D G + VR E LP+ L ++ G K V+ Sbjct: 483 AVPLAMVREII-PFSSDSIQEVSGRPTIVVRDEILPVRRLTELL---GWKATQEPCFGVL 538 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 +QS + + L +D IG+ VV+K L++ K G++ AT+ GDG+V L++D+ L + + Sbjct: 539 MQSAEKTFILAIDSFIGRDDVVIKPLQNIRPK--GVAGATLSGDGAVVLVLDMEDLLSND 596 Query: 645 R 645 R Sbjct: 597 R 597 Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 62/110 (56%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + Q F E+ ELL+D++ L+ L+ D LN IFR H+IKGGAG + L Sbjct: 7 MEELLQDFLTESSELLSDVDNKLVELEKYPEDKGLLNDIFRGFHTIKGGAGFLNATPLVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 H ENL D+ R GE++LN+ ++++ L+ ++++ QS+ P A Sbjct: 67 LCHRTENLFDKLRNGELKLNSHVMDVILDATGVVRDMFGDLAQSRMPAPA 116 >UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MR50_9FIRM Length = 705 Score = 285 bits (728), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 157/385 (40%), Positives = 245/385 (63%), Gaps = 10/385 (2%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 I V + K+D L ++VGE++ T+SM+ + +L+ + + QL++ +LQ++VMS Sbjct: 321 ISVNLSKLDTLHDIVGEIITTESMVIA-NPDLEGLELESFSKAARQLRKLTDELQDTVMS 379 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IRM+P+ VF + R+VRD+ KL K+ EL L G +TE+DKS+++ + DPL HLVRN +D Sbjct: 380 IRMVPLAGVFQKMGRIVRDMKIKLNKEAELVLEGETTEVDKSIVDNLNDPLMHLVRNCMD 439 Query: 384 HGIELP-EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 HGIE R+A GK G + LSA+H G + I V+DDGAG+N E++L KA GL Sbjct: 440 HGIEDDINVRIAEGKPEKGTVKLSAKHSAGEVIITVSDDGAGINCEKVLEKAKENGLLTK 499 Query: 443 --ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 + E+ +I PGFST + VT+ SGRGVGMDVV+ NI++ GG + ++S++G G++ Sbjct: 500 PESEYTTKEIQNMILLPGFSTNDTVTEYSGRGVGMDVVRSNIEQCGGTLTVESEEGKGSS 559 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD-LHPLAGGERVLEVRGEYL 559 I +PLTLAI++GM ++V +F +P++++ ESL L+ GE ++ +RG Sbjct: 560 FIIRIPLTLAIVEGMKLKVGSTIFTVPISSIKESLMVANNQLLNDTKQGEMIM-IRGVCY 618 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE---SNYR- 615 PI+ L + FN+ T+ GI++++ GG+ L D+LIG+ VVVK S Y Sbjct: 619 PILRLHEKFNMPTEVTKLEDGILLLVDVGGKNVCLFADKLIGEQPVVVKPFPKYLSQYNI 678 Query: 616 KVPGISAATILGDGSVALIVDVSAL 640 K G+S T++GDG+++LI+DV+ L Sbjct: 679 KAEGLSGCTVMGDGTISLIIDVNNL 703 Score = 41.6 bits (96), Expect = 0.091, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 8/111 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 T ++ DE+L E + Q E +N IFR H+IKG + GF LQ H Sbjct: 20 NTLLEQLDEILLRTEDANVFSQ------EDINEIFRIMHTIKGSSAMMGFENLQHLAHKG 73 Query: 70 ENLLDEAR-RGEMQLNTDII-NLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 E++ R + E+ + + L E D+ + +++ + S + D D+ Sbjct: 74 EDMFFVIREKPEIAKDAHFVYELIFEVSDLYKAEIEYIQNSGDDDYTPTDF 124 >UniRef50_A8TEK5 CheA signal transduction histidine kinase n=1 Tax=Methanococcus voltae A3 RepID=A8TEK5_METVO Length = 1017 Score = 284 bits (727), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 153/381 (40%), Positives = 246/381 (64%), Gaps = 8/381 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L + +LQE VM Sbjct: 642 TVRVNIEKLDKLMNLVGEVVINRANFTQIATKYDL---KELHNAVGRLNMLSTELQEEVM 698 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 S+RM+P+ +VF+R+PR VRD A L K+++ + GS ELD+++++ + +PLTHL+RNSL Sbjct: 699 SMRMIPVAFVFNRFPRTVRDTARALNKEIDFIIEGSEIELDRTVLDELAEPLTHLIRNSL 758 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIE + R GK G L L A + + I + DDG G+N E I +GL Sbjct: 759 DHGIEHADVRKQLGKPEKGLLKLIATRERDRVNIVIKDDGKGINPETIRNNVVKKGLMSR 818 Query: 443 ---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E ++D+E LIF PGFSTAE+V+DVSGRGVGMDVV+ I+ +GG V +QS+ G G+ Sbjct: 819 EEVEKLTDNEAINLIFLPGFSTAEKVSDVSGRGVGMDVVRTKIESLGGSVSVQSEVGKGS 878 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 I + LPLT+AI+ + V++ D+++ LPL +V++ + +++ L G E ++ R L Sbjct: 879 EIILHLPLTMAIIQTLLVKLKDQIYALPLTSVLDVVSISNDEINNLEGQEAII-YRDHIL 937 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+ L + + +VV+ ++ G + L++D++IG+ ++VVK L + + G Sbjct: 938 PVTWLCDALHQYNDCSSEEIYVVVVEKNKG-KIGLILDEVIGRDEIVVKPLTGILKNING 996 Query: 620 ISAATILGDGSVALIVDVSAL 640 ++ ATILGDG VALI+D++ L Sbjct: 997 LAGATILGDGRVALILDLNNL 1017 Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 67/119 (56%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + + F EA+E L + Q+L+ L+ D E +N IFR+AH++KG A T GF + + TH Sbjct: 7 YRELFMTEAEEHLQSLNQNLVDLENCPEDTEIINLIFRSAHTLKGSARTLGFEHISQLTH 66 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 ME++LD R G++ +N +I++L + D ++ + + + ++ I ++ L Sbjct: 67 HMEDILDNIRDGKIPVNHEIMDLLFKCLDALETMVGEVADGENETSVDYESIIDIIKNL 125 >UniRef50_Q3ADA4 Chemotaxis protein CheA n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ADA4_CARHZ Length = 900 Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 167/448 (37%), Positives = 266/448 (59%), Gaps = 17/448 (3%) Query: 201 GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN- 259 G + + +TA L F++E I+ E P I K Q T +E+E ++ Sbjct: 457 GSLTFEQLTARLQFLLEL--ISVPQEEEKPAIEESKETKEKVAQ-DTKELEQENLAKAKR 513 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG----QLQRNAR 315 +S +++++ E D+L+ L GEL+I ++ L +L+ + ++ + + R AR Sbjct: 514 KSQALKISQELADKLLALAGELIIAKNSLPYLVKKLEMLGQMEVARELKDKALYIDRLAR 573 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 D Q+S+M +R++P+E +F R+PR VRD A +L KQV L L G T+L+K ++E + +PL Sbjct: 574 DFQDSLMELRLLPVENIFKRFPRFVRDTAKQLNKQVNLVLKGEETKLEKDILEELYEPLL 633 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRNSLDHG+E E+R+ GK + G L L+A QG + IEV DDG G+NRE++L KA Sbjct: 634 HLVRNSLDHGLEEIEERITGGKPATGLLELAAYSQGNKVIIEVKDDGRGINREKVLKKAR 693 Query: 436 SQGLTVSENMS---DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 GL +E S ++V LIF PGFST ++VTD+SGRGVGMDVVK+ + +GG VE+ Sbjct: 694 ENGLITAEEASRLRPEQVYELIFKPGFSTKDEVTDISGRGVGMDVVKQKVNALGGQVEVF 753 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S++G GTTIR++LP+++A + + V ++F +PL V E++ ++ + V+ Sbjct: 754 SEEGKGTTIRLILPISMATTEVLKFTVGGKLFGIPLYTVRETVNVPVKEIKSFK-QKPVV 812 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 +R +P+V L K + + E + ++IL G +AL+VD L G+ +V++K L Sbjct: 813 VIRNNVIPLVNLAKTLGLKEKEQEEVK--IIILHYG---FALIVDDLQGKEEVIIKPLTG 867 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + A+ILGDGS+ LI+ + L Sbjct: 868 ELSHLSLYEGASILGDGSILLILAPTGL 895 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 40/108 (37%), Positives = 68/108 (62%), Gaps = 1/108 (0%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M +SD +TF EA ELL +E +L L+ + + E +NA+FR AH++KG AG G + + Sbjct: 1 MVLSDLRETFVFEAQELLEQLEPLILDLEINSSE-ETINALFRIAHTLKGSAGIAGINSV 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 +E TH +E +L+ R E+++++D+++L LE D + E + A +E Sbjct: 60 KEFTHYLETVLEALRSHEIEISSDVVDLLLEAFDHLGELITALTLGEE 107 >UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 Length = 692 Score = 284 bits (726), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 161/404 (39%), Positives = 253/404 (62%), Gaps = 21/404 (5%) Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS--ELD 296 K AA++ P +V + S+RV +E++D+ +N+V ELVI ++ L Q SS +L+ Sbjct: 307 KKAAKKEPHKKVHQ----------SVRVDLERLDKFMNMVSELVINRTRLEQISSNYKLN 356 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 +N ++ Q+ R DLQ+ VM IRM+P++ VF+R+PR++RDL+ +L K++EL + Sbjct: 357 ELNE-----TLEQVARTTSDLQDLVMKIRMLPLDTVFNRFPRMIRDLSVELDKEMELVIE 411 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G+ TELD+++I+ I +PL HL+RN+ DHGIE E+R++ GKN VG + L A +G I Sbjct: 412 GADTELDRTVIDEIGEPLIHLIRNAADHGIESKEERISKGKNPVGKISLIAYQEGTKAVI 471 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 +V DDG+G+ +++ KA + G+ +E MSD++V LIF GFST +VTD+SGRGVGMD Sbjct: 472 KVVDDGSGIPVDKVREKAENMGIN-TEGMSDNDVRNLIFLQGFSTNTEVTDISGRGVGMD 530 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK I +GG V++ S++ G+ I LPLTL I+ + V V +E + L+ V + Sbjct: 531 VVKTKISALGGTVDVVSEKNEGSAFVIRLPLTLQIIQVLLVGVGNETMAISLSYVDRVID 590 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 +E DL + + V+ G + +V L+ V +K + +VI++ G + L+V Sbjct: 591 YKE-DLIKMTNNKEVIIYNGNVISLVRLYDKLRVEKSKN--NKNYIVIVKVGEKTVGLMV 647 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 D L+GQ ++V+K L + + ATILGDG V LI+DV+AL Sbjct: 648 DSLLGQREMVIKPLGKTLQNLKEYMGATILGDGLVTLILDVAAL 691 Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 61/100 (61%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD S + F +EA + L + + LL L+ E + +++N IFR AH++KG A T GF+ + Sbjct: 1 MDTSQYMSMFLEEAMDNLQILNESLLQLEQEPHNIDKVNEIFRVAHTLKGMAATMGFNEV 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 E TH ME++L R G++++ D++ + + D +++ + Sbjct: 61 GELTHKMEDVLSRFRDGKLKVTQDVVTVLFKCLDTLEQMI 100 >UniRef50_C0GP18 CheA signal transduction histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GP18_9DELT Length = 906 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 177/455 (38%), Positives = 254/455 (55%), Gaps = 74/455 (16%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELD--PVNHG----DLITSMGQLQRNARD 316 S+RV V ++ L+NL GELV++++ L Q S D +N DL+TS + Sbjct: 374 SLRVNVGLLENLMNLAGELVLSRNQLMQAISTQDDQTINLAGQRIDLVTS---------E 424 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE++M RM P+ VF+++PR+VRD++ LGK +EL L G ELDK++IE + DPLTH Sbjct: 425 LQEAIMLTRMQPVSNVFNKFPRVVRDMSQSLGKDIELYLEGKEVELDKTIIEGLSDPLTH 484 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRNS DH IE P++R+A GK G ++L A H G + IE+ DDG G+ ERI+ KA Sbjct: 485 LVRNSADHAIEKPDERVAKGKKPQGKIVLKAFHAAGQVNIEIIDDGKGIPVERIVEKALD 544 Query: 437 QGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +GL E MSD + A LIF PG STA+Q+TDVSGRGVGMDVVK N+ ++GG V+I + Sbjct: 545 KGLITEEQVRTMSDKDKAQLIFLPGLSTADQITDVSGRGVGMDVVKSNLDRLGGQVDIDT 604 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH---PLAGGER 550 ++G GT+IRI LPLTLAI+ + + V+ E F +P V E +Q + + G + Sbjct: 605 EEGKGTSIRIKLPLTLAIIPSLLISVSQERFAIPQINVDELIQIPAQQVQEKIEVVGDAQ 664 Query: 551 VLEVRGEYLPIVELWKVFNV---------------------------------------- 570 VL +RGE +P+V L ++ + Sbjct: 665 VLILRGELIPLVGLNEILRLDQKNTRSKARVTSIEEARSRKDRQDKKAETSAQTSEKSRS 724 Query: 571 --AGAKTEATQGI-----------VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 AG + E + +V++ SG +Y L+VD+L ++VVK L + + Sbjct: 725 EDAGLEKEVIEASKWSISGEEDINIVVVYSGTFKYGLVVDELHDSVEIVVKPLGRHLKAC 784 Query: 618 PGISAATILGDGSVALIVDVSALQAINREQRMANT 652 G + ATI+GDG VALI+DV + + MA T Sbjct: 785 DGYAGATIMGDGHVALILDVVGMARLAELSSMAGT 819 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/107 (38%), Positives = 65/107 (60%), Gaps = 2/107 (1%) Query: 10 QTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Q + +E+ E L D+E LL ++ E D + +N +FRAAHS+KGGAG G L+E H Sbjct: 7 QMYVEESREHLEDIESDLLKIEEAGEDVDLDLVNKVFRAAHSMKGGAGFLGLINLKELAH 66 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 +EN+LD R E+ N +I+N+ L D ++E ++ +S++ D A Sbjct: 67 KIENVLDMIRNMELTPNPEIVNIILLAFDRLREMVENIHESEDMDIA 113 >UniRef50_Q44737 Chemotaxis protein cheA n=24 Tax=Borrelia RepID=CHEA_BORBU Length = 864 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 144/343 (41%), Positives = 223/343 (65%), Gaps = 4/343 (1%) Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 G+L R DL ESV+ RM+P+ +FSR+ R+VRDL+ KL K V L + G TELDKS+I Sbjct: 523 GRLSRIITDLHESVLKTRMLPISNIFSRFTRVVRDLSKKLNKIVNLKMEGEETELDKSVI 582 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 + ++DPL H VRNS+DHG+E E+R+ GK+ G +IL A+++G I IE+ DDG G++ Sbjct: 583 DDLVDPLMHCVRNSMDHGLETVEERVKRGKSKAGTIILRAKNEGNVISIEIEDDGIGIDP 642 Query: 428 ERILAKAASQGLTVSEN--MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 + I K +G T+ E+ SD E+ LIFAPGFSTA QVTD+SGRGVG+DVVK++I+K+ Sbjct: 643 KVIRRKLIEKG-TIKEDAIYSDFELINLIFAPGFSTAVQVTDLSGRGVGLDVVKKSIEKL 701 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G + ++S+ G GT +I LPLTL I+ G+ V+ E +++PLN V+E+ + E D+ L Sbjct: 702 NGTILVESEIGLGTIFKIKLPLTLVIIQGLLVKSGSETYVIPLNNVLETHRITEHDIKLL 761 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 V +R E + ++ L K+FN+ + + ++++ + + A++VD ++G+ Sbjct: 762 ENYHEVYNLRDEVISVLRLDKLFNITRDDS-LIEKFLIVVNTSNMKIAIVVDSILGEEDF 820 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 VVK ++ + GI AT LG+G V LI+DV L + ++ + Sbjct: 821 VVKPIKDKFSSSAGIVGATTLGNGKVVLIIDVFKLFDLQKDTK 863 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 49/75 (65%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 FF+EA L+ +E++++ L+ + +++ ++ IFRAAH++KG + + L + TH++E Sbjct: 14 VFFEEAQNLVDILEENIMSLEDDPNNSDTIDEIFRAAHTLKGSSASLDMMELSDFTHIVE 73 Query: 71 NLLDEARRGEMQLNT 85 ++ D R G++ +N Sbjct: 74 DVFDAIRDGKVNINN 88 >UniRef50_A9F1P0 Chemotaxis protein CheA n=2 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F1P0_SORC5 Length = 562 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 159/380 (41%), Positives = 240/380 (63%), Gaps = 8/380 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 SIRVAVEK+D + +L+GEL + ++ +A+ + L M + R ++L+E+V Sbjct: 158 SIRVAVEKLDCMADLIGELTLGRNRIARTLRAVRGDAGAALRDEMEEQDRLCKELEEAVR 217 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 + RM+P+ F Y R VRDLA G+Q L +V E+D +++ER D LTH++RN++ Sbjct: 218 AARMVPVGPWFRHYERTVRDLAHAHGRQARLLVVHGDVEVDTAVVERFRDALTHILRNAI 277 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 HGIE PE R AAGK+ G + L A H+ G I + ++DDGAG++RERI A+ + G Sbjct: 278 CHGIEPPEARRAAGKDPCGTITLRAAHERGGIALRISDDGAGMSRERIAARVCALGRHPE 337 Query: 443 -ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 E + D E+ L+F PGFSTA + + ++GRG+GMDVV+R+++ + G + I+S++G GT++ Sbjct: 338 PETLPDHELFNLVFEPGFSTAAESSLLAGRGMGMDVVRRSVESIQGTIRIESREGQGTSL 397 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PREADLHPLAGGERVLEV-RGEYL 559 I LPLTLA ++G+SV + E +++PL AV+ PR A H GG R L + RG L Sbjct: 398 SIQLPLTLATIEGLSVGIGGERYVIPLRAVLACCDLPRGALAH---GGARGLMIRRGRAL 454 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P V L +F + G+ + VVI+ G L+VD L G+ + VVK L +R+V G Sbjct: 455 PCVRLRALFGLGGSPPPDER--VVIVAHDGSEAGLVVDLLDGEGRTVVKPLGQLFRRVRG 512 Query: 620 ISAATILGDGSVALIVDVSA 639 ++ +TILGDGSVA+I+DV A Sbjct: 513 VTGSTILGDGSVAMILDVDA 532 Score = 74.7 bits (182), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 3/134 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D + QTF EA ELL ++E+ LL L+ E L +FRA H++KG AG+ G Sbjct: 1 MNSDRDELLQTFTPEAHELLDEIERALLQLETGRDAHEVLQRVFRATHTLKGSAGSVGLG 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L + H E++++ RGE+ L+T +++L LET D + + ++ + + S+ + Sbjct: 61 GLSDLGHAAEDVIEALCRGEVSLSTPVVSLLLETVDAARRLVAEVERGRAERSTSYREVV 120 Query: 121 QAL---RQLALEAK 131 L R+ L+AK Sbjct: 121 ARLEEARRGGLKAK 134 >UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVV5_ACIC1 Length = 870 Score = 282 bits (722), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 165/398 (41%), Positives = 242/398 (60%), Gaps = 18/398 (4%) Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQS-MLAQRSSELDPVNHGDLITSMGQLQRN 313 T + TS+RV V +D L+ LVGELV+T++ ++A +++ D V + + +L Sbjct: 285 TPHTVAETSLRVDVTLLDTLMRLVGELVLTRNQIVATAATQSDSV----IARAAQRLNLL 340 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 +LQE VM RM P++ VFS+ PR+VRDL GKQV L + G TELDK+++E I DP Sbjct: 341 VTELQEGVMKTRMQPIDTVFSKLPRVVRDLGLACGKQVRLEIEGRDTELDKTILEAIKDP 400 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L H VRN++DHGIE PE R GK + G L+L A H+GG + IE+TDDGAG++ +R+ + Sbjct: 401 LVHAVRNAIDHGIEAPEVRRERGKPTEGRLVLRAYHEGGQVNIEITDDGAGIDPQRVAER 460 Query: 434 AASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 A G MS E+ LIF PG STAE VT+VSGRGVGMDVV+ N++++GG V++ Sbjct: 461 AIQAGFDAEHVRRMSQRELINLIFVPGLSTAETVTNVSGRGVGMDVVRANVERIGGTVDV 520 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP----LAG 547 S+ G GTT+RI +PLTLAI+ ++V E + +P ++ L E D Sbjct: 521 TSELGVGTTLRIKIPLTLAIIPALTVECRGERYAIP-QVNLDELVSLEGDQASRGVEFLS 579 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-----VVILQSGGRRYALLVDQLIGQ 602 V +RG +P+V L + + G + +V+LQ+ GRR+ L+VD+++ Sbjct: 580 DAPVFRLRGNLIPLVWLDHILGL-GRPPRPGDPLPEIVSIVVLQAEGRRFGLVVDRILNT 638 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++VVK L +++ + ATI+GDG V LI+DV AL Sbjct: 639 EEIVVKPLSRKLKEIGAYAGATIMGDGRVCLILDVRAL 676 Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 4/137 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E L +++ L+ L+ E + L +IFR H+IKG +G F+ L+ Sbjct: 4 FEEIVREFLVESYENLDQLDRDLVALEQEPGSRDLLQSIFRTIHTIKGTSGFLAFNKLEA 63 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS---QEPDAASFDYICQ 121 TH E LL + R G ++ + + LE D ++ L A + + + D + Sbjct: 64 LTHAGEGLLAKLRDGGLEFTRERADGLLELVDAVRTILAAIETTGTEGDGDYTALTAKLS 123 Query: 122 ALRQLALE-AKGETPSA 137 AL++L E A G+T SA Sbjct: 124 ALQELPAEDAAGKTQSA 140 >UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 Tax=Alphaproteobacteria RepID=Q07IM6_RHOP5 Length = 947 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 159/388 (40%), Positives = 238/388 (61%), Gaps = 16/388 (4%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 SIRV V+ ++ L+ +V ELV+T++ L + S + + + +L +LQ+ VM Sbjct: 269 SIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHEDT---EFKVPLQRLSTVTAELQDGVM 325 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 RM P+ + + PR+VRDLAG+LGKQ+EL + G+ TELD+ +++ I DPLTH+VRNS Sbjct: 326 KTRMQPIGNAWQKLPRIVRDLAGELGKQIELEMHGADTELDRQVLDLIKDPLTHMVRNSA 385 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHG+E +R GK G + LSA H+GG+I I + D+G GLN E+I AKA + GL Sbjct: 386 DHGLETTVERAELGKPEQGTIRLSAYHEGGHIVICIADNGRGLNTEKIKAKAVANGLASE 445 Query: 443 ---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E MS+ ++ IFAPGFSTA VT VSGRGVGMDVV+ NI ++GG ++I+S G GT Sbjct: 446 ADVEKMSESQIHKFIFAPGFSTAAAVTSVSGRGVGMDVVRTNIDQIGGTIDIKSVAGEGT 505 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER-----VLEV 554 ++ I +PLTLAI+ + V A F +P AV+E ++ H + ER VL + Sbjct: 506 SVTIKIPLTLAIVSALIVEAAGNRFAIPQLAVVELVRAHANSEHKI---ERIKETPVLRL 562 Query: 555 RGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R + LP++ L K+ + A+ E G +V+ Q G + + ++VD + ++VVK + + Sbjct: 563 RNKLLPLMHLRKLLKIDNGSAEAEPENGFIVVTQVGNQTFGIVVDGVFHTEEIVVKPMST 622 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 R + S TILGDG+V +IVD + + Sbjct: 623 KLRHIEMFSGNTILGDGAVIMIVDPNGI 650 >UniRef50_P96123 Chemotaxis protein cheA n=5 Tax=Treponema RepID=CHEA_TREPA Length = 812 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 157/356 (44%), Positives = 231/356 (64%), Gaps = 10/356 (2%) Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 +S L R + +LQE VM IRM+P+ +FSRYPR+VRDL+ L K+V L + G TELDK Sbjct: 456 SSAQNLGRISGELQEGVMKIRMVPISQIFSRYPRVVRDLSRDLRKEVRLVIEGEETELDK 515 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 S++E ++DP+ H VRNSLDHGIE PE R +GK + G L+L A ++G I IEV DDG G Sbjct: 516 SVVEDLLDPIMHCVRNSLDHGIEAPEVRARSGKPAQGTLLLRASNEGNMIVIEVADDGRG 575 Query: 425 LNRERILAKAASQG-LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 ++ E + KA +G L +N+++ E LIFAPGFST+ V++VSGRGVG+DVVK +I+ Sbjct: 576 IDVEAVKTKAVERGVLHPGKNLTEVEAFQLIFAPGFSTSRSVSNVSGRGVGLDVVKTHIE 635 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++ G V + S+ GT I LPLTLAI+ G+ +RV EV+ +P+ +V+ES + + +++ Sbjct: 636 RLNGTVSVFSEVQKGTRFVIKLPLTLAIIQGLLIRVGQEVYSIPIASVIESHRIKSEEIN 695 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQ 602 + E V VR E + ++ L ++F ++ Q VVI+ + ++ L+VD LIG+ Sbjct: 696 RIDNYE-VFNVRNEVISLLRLDRLFGISCDDEVTGQYHYVVIVGAAEKKVGLMVDALIGE 754 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL-------QAINREQRMAN 651 VV+K L + PGI+ A+ILGDGSV+LI+DV L + + RE+R A Sbjct: 755 EDVVIKPLRDQFTSSPGIAGASILGDGSVSLIIDVGQLLELGLKREILARERREAT 810 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + FF EA++ + +E ++LV++ + + + ++ IFRAAH++KGGA T L T Sbjct: 13 ELLKDFFSEAEQQVEQLESNILVIEQDPTNRDAVDEIFRAAHTLKGGAATVEMHELSGFT 72 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+LLD R ++ ++ +++L L + D+++ L++ + P A + LR Sbjct: 73 HAVEDLLDGIRSEKVTVDGAVVDLLLTSLDVIKAMLES-RAGGGPYAEDVSDLVARLRSY 131 Query: 127 ALEAKGETPSAVTRLSV 143 L A G P A LSV Sbjct: 132 -LPASGTVPGAARGLSV 147 >UniRef50_A7H814 CheA signal transduction histidine kinase n=5 Tax=Cystobacterineae RepID=A7H814_ANADF Length = 558 Score = 281 bits (720), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 172/386 (44%), Positives = 244/386 (63%), Gaps = 14/386 (3%) Query: 261 STSIRVAVEKVDQLINLVGELVITQS----MLAQRSSELDPVNHGDLITSMGQLQRNARD 316 + ++RV V K+D++++L GE+ + + +L QR D H L+ + + R +D Sbjct: 167 ARTLRVDVAKLDRMLDLAGEIAVARGRLTDLLEQRGG--DGAEH--LLEAHREADRLYQD 222 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE +M RM+P+ F + R VRD A LGK+ L + G E+D ++IE I DPLTH Sbjct: 223 LQELIMQARMVPIGPTFHPHARTVRDAASALGKRARLVVEGEDVEVDTAVIEHIRDPLTH 282 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 +VRN+L HGIE PE R A GK VG ++L A H+ G++ I+V DDG GL+R RI A+A + Sbjct: 283 MVRNALHHGIESPEARRARGKPPVGTVVLRAFHEAGSMVIQVADDGGGLDRARIAARAVA 342 Query: 437 QGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 QGL + ++ ++D+E A L+F GFSTA++VT++SGRGVGMDVV+RN++ + G V I S Sbjct: 343 QGLALEADRVTDEEAARLVFEHGFSTADRVTELSGRGVGMDVVRRNVEALRGSVAIHSAP 402 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PREADLHPLAGGERVLEV 554 G GT I + +PLTLAI+ G V VADE FILPL+AV+E L+ P E G +L V Sbjct: 403 GVGTEITLRVPLTLAIIQGFKVGVADETFILPLDAVVECLELPAEQSAAGAPCG--ILNV 460 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RG LP + L F + GA A Q +VV+ + G + VD L G+ V+K L + Sbjct: 461 RGAPLPYLRLRDHFGLGGAPP-ARQNVVVV-RHGAHTAGVAVDALHGESSTVIKPLGRMF 518 Query: 615 RKVPGISAATILGDGSVALIVDVSAL 640 V GIS ++ILG+G+VALI+DV L Sbjct: 519 GGVVGISGSSILGNGNVALILDVGGL 544 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/100 (33%), Positives = 58/100 (58%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + +D QTF EA+E MEQ L+ L+ D E L+A+FR AH++KGGA GF Sbjct: 4 LGIDRELLVQTFLAEAEETFGRMEQALVALEARPGDEEILHALFRDAHTLKGGAALVGFD 63 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE 100 +++ H +E++L+ R + + ++ L L + D++++ Sbjct: 64 GVRDLAHDLEDVLERLRVRSLGVTDALVTLLLRSVDVLRQ 103 >UniRef50_C9QIV3 Chemotaxis protein CheA n=2 Tax=Bacteria RepID=C9QIV3_VIBOR Length = 727 Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 158/391 (40%), Positives = 236/391 (60%), Gaps = 13/391 (3%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 ++ ++RV +D ++N+VGELV+ ++ L N ++ ++ L D Sbjct: 333 KTQAEATVRVDTSTLDTIMNMVGELVLVRNRLLSLGLN---SNDEEMSKAVSNLDVVTAD 389 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQ +VM RM P++ VF R+PR+VRDLA L K + L + G T+LDK+L+E + DPL H Sbjct: 390 LQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKDITLEMRGEDTDLDKNLVEALADPLIH 449 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRNS+DHGIE+P+ R+A+GK+ G +ILSA +G +I + + DDG G++ +++ A Sbjct: 450 LVRNSVDHGIEMPDARVASGKSRTGKVILSASQEGDHIELAIVDDGGGMDPDKLRGIAVK 509 Query: 437 QGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +G+ + ++D E LIF PGFS+ EQ++D+SGRGVGMDVVK I + G ++I S Sbjct: 510 RGIMDEDAASRLTDKECFNLIFMPGFSSKEQISDISGRGVGMDVVKTAINTLNGSIDIDS 569 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH--PLAGGERV 551 + G GT I I +PLTLAIL + V VA+ F LPL +V E DL + G+ Sbjct: 570 EMGKGTKITIKVPLTLAILPTLMVGVANHPFALPLASVNEIFH---LDLSRTNVVDGQLT 626 Query: 552 LEVRGEYLPIVEL--WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 + VR + +P+ L W + G VVI+Q G +R +VD LIGQ +VV+K Sbjct: 627 IIVRDKSIPLFYLQNWLAPQAGQVELRKGHGHVVIVQIGSQRVGFVVDTLIGQEEVVIKP 686 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSAL 640 L++ + PG++ ATI DG +ALI+DV L Sbjct: 687 LDNLLQGTPGMAGATITSDGHIALILDVPDL 717 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 1/111 (0%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS D+ D Q F EA E+L + + L+ L+ D + LNAIFR H++KGGAG Sbjct: 1 MSYDLDEDILQDFLVEAGEILELLSEQLVELENNPEDKDLLNAIFRGFHTVKGGAGFLSL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 + L +T H EN+ D R G+ +N +++ L+ D + EQ A + +E Sbjct: 61 AELVDTCHGAENVFDILRNGQRHVNASLMDTMLKALDTVNEQFQAVQDREE 111 >UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK) n=40 Tax=Bacteria RepID=Q2RX20_RHORT Length = 942 Score = 281 bits (719), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 170/422 (40%), Positives = 252/422 (59%), Gaps = 26/422 (6%) Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQL 310 E+ S S SIRV VE ++ L+ LV ELV+T++ L Q R S + + + + +L Sbjct: 238 EQKEGSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVRGS-----DDSEFVAPLQRL 292 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 DLQE VM RM P+ +++ PR+VRDL+ ++ K+++L + G+ TELD+ ++E I Sbjct: 293 SHITTDLQEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDRQVLEMI 352 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPLTH+VRNS DHG+E P++R AAGK G + L+A H+GG+I IE++DDG GLN ERI Sbjct: 353 KDPLTHMVRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRGLNLERI 412 Query: 431 LAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 AKA S GL ENM+D ++A IF G STAE+VT VSGRGVGMDVVK NI+K+GG Sbjct: 413 RAKALSNGLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTNIEKIGG 472 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ---PREADLHP 544 VE+++ G G+ I +PLTLAI+ + V + E F +P +V+E ++ E + Sbjct: 473 TVELKTWPGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANSETTIEQ 532 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNV-------AGAKTEATQG-----IVVILQSGGRRY 592 + VL +R +P+V L + + G +AT G +V+ Q G + Sbjct: 533 INTAP-VLRLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQVGTYTF 591 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 ++VD++ ++VVK + R V S TILGDGSV +I+D + + + E M + Sbjct: 592 GIIVDRVFDTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILDPNGIASATGEVTMGSA 651 Query: 653 AA 654 + Sbjct: 652 SG 653 >UniRef50_B4VZE9 CheW-like domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VZE9_9CYAN Length = 729 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 170/430 (39%), Positives = 252/430 (58%), Gaps = 18/430 (4%) Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVE-REKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 T+ +I P + P R E T N SIRV + +D+L+NLVGELV+ Sbjct: 138 TINSQKEIPKPAPTNPEGSKLPCDREELMSALTTPNTVQSIRVDINLLDKLMNLVGELVL 197 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 ++ + Q S+ D +T+ QL R +LQE VM RM P+ + ++PR+VRD+ Sbjct: 198 VRNQIQQFSTLQD---ETAFVTTSQQLNRLTTELQEGVMKTRMQPISTITRKFPRVVRDV 254 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A KQV+L + G TELDK++IE I DPLTHL+RN +DHGIE P+ R GK++ G L Sbjct: 255 AIATEKQVQLEIEGEDTELDKTIIEAIKDPLTHLLRNCVDHGIESPDIRQTQGKSATGRL 314 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFS 460 L A H+ G + IE++DDGAG++ ER+ KA S GL + +SD + LIF PGFS Sbjct: 315 RLQAFHESGYVTIEISDDGAGIDSERLKQKALSLGLITPNQANRLSDTDALNLIFIPGFS 374 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TA VT +SGRGVGMDVVK +++K+GG V++ ++ G GTT ++ +PLTLAI+ + V Sbjct: 375 TANFVTRLSGRGVGMDVVKTDVEKVGGTVDVHTQLGLGTTFKLKIPLTLAIIPALIVTSG 434 Query: 521 DEVFILPLNAVME--SLQPREADLHPLAGGER--VLEVRGEYLPIVELWKVFNVAGAKTE 576 + + +P +++E LQ +AD H + + V +RG+ LP+V L + + + E Sbjct: 435 GDRYAIPQTSLLELVRLQGEQAD-HGIEYVHKAPVYRLRGKLLPLVYLNRELELVEWEPE 493 Query: 577 ATQG------IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 +V+LQ + L+VD + ++VVK L ++ P + ATILGDG Sbjct: 494 PAHPQSEIMLNIVVLQVDNFTFGLVVDAINDTQEIVVKPLGKLLKETPCFAGATILGDGK 553 Query: 631 VALIVDVSAL 640 VALI+D+ +L Sbjct: 554 VALILDIFSL 563 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 6/142 (4%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F E+ E ++ +E L+ L+ + + L I+R+ H+IKG G F L+ TH Sbjct: 6 KAFLVESYENISQIETDLVTLEKNPTNKDLLEGIYRSLHTIKGNCGFMAFPTLEALTHSG 65 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQE---QLDAYKQSQEPDAASFDYICQALRQL 126 ENLL R G++QLN +I + LE D MQ+ Q+DA Q E D + + Q L QL Sbjct: 66 ENLLSCLRDGQLQLNAEITSSLLELLDAMQQICAQIDAIGQEGEVD---YSGLIQTLNQL 122 Query: 127 ALEAKGETPSAVTRLSVVAKSE 148 +G+ T +++ ++ E Sbjct: 123 QSRDRGDEGGFCTNVTINSQKE 144 >UniRef50_Q6LU38 Hypothetical chemotaxis histidine protein kinase, CheA n=1 Tax=Photobacterium profundum RepID=Q6LU38_PHOPR Length = 746 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 163/389 (41%), Positives = 250/389 (64%), Gaps = 16/389 (4%) Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVI---TQSMLAQRSSELDPVNHGDLITSMGQLQR 312 ++ ES S+RV K+DQLINLVGELVI S+LA+++ E + V +++ + Sbjct: 350 SKRQESRSLRVDAHKLDQLINLVGELVIAGANTSLLARQNGEPELVESSAVVSLL----- 404 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +++ + +RM+P++ F R+ R+VR+++ LGK++ L + G TELDK ++E+I D Sbjct: 405 -VEEIRGLSLHLRMVPIDDTFKRFHRVVREISRDLGKEIRLKIEGGDTELDKGVVEKIAD 463 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HLVRN++DHGIE E RL+ GK + G + L A + G+I IEV DDG G++ ++ A Sbjct: 464 PLMHLVRNAIDHGIEAKELRLSKGKEATGTVTLRAYYDSGSIVIEVCDDGGGVDPVKVRA 523 Query: 433 KAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 KA GL +E +SD EV LI G +T V+D+SGRGVGMDVVKRNI+ + G +E+ Sbjct: 524 KAIENGLINAEQKLSDQEVLRLILEAGLTTKTAVSDLSGRGVGMDVVKRNIEALQGSIEV 583 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 +S++G G+ +R+ LPLTL+I+DG +V V +++PL+AV+E ++ E L+ Sbjct: 584 ESQKGEGSLLRLRLPLTLSIIDGFAVGVGTSTYVIPLDAVVECIEYSEQ----LSPNGNY 639 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 + +RGE LP + L + F E Q +V++QSG ++ +VDQL G+ Q V+K L Sbjct: 640 VNLRGEILPFINLQRQFK--EGHIEVKQRNIVVVQSGVQKAGFVVDQLQGELQTVIKPLS 697 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSAL 640 + ++ GIS +TILG G VA+I+DV AL Sbjct: 698 KIFSQLSGISGSTILGSGEVAMILDVPAL 726 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 5/106 (4%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F DE+ +LL +ME L L+ + E +N +FRAAH+IKG AG FGF + TH + Sbjct: 9 EMFVDESLDLLQEMESALNQLKAAPENGELINLVFRAAHTIKGSAGLFGFDGIVAFTHTV 68 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQ---EQLDAYKQSQEPD 112 EN+L++ R GE + +I L +D ++ EQL +++QE D Sbjct: 69 ENVLEQVRAGERLCDDALIASLLGCRDYIESLIEQLG--RETQELD 112 >UniRef50_D2LCX3 CheA signal transduction histidine kinase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCX3_RHOVA Length = 768 Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 196/641 (30%), Positives = 319/641 (49%), Gaps = 74/641 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E + + ++E H++V + + E + IFR H+IKG +G G LQ+ Sbjct: 1 MDELLSDFLSEVTDHIQEIESHVVVFEKNPANTESIRQIFRLFHTIKGTSGFLGLDRLQK 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H E L+D R G ++ +L L+ D ++ L +++ Sbjct: 61 VSHAAETLIDALRSGRGPVSP-AASLLLKAIDRVKSLL------------------ESVG 101 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +L E G+ V R+ + E++R Sbjct: 102 ELGEEPAGDDGDIVGRIEQFLGQSEEAEEAR----------------------------- 132 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 TD+ AD+ A+ P I + +I + D VE SP P K + Sbjct: 133 -TDL---ADATDALQPEPIVQQEIAPA---PLSTDAFATAMVETSP-----PAPKADVDA 180 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + T + T + ++R+ + ++++L ELV++++ + S + D + Sbjct: 181 SAT----KPDTGKETGQETLRIPTVVIQRIMDLATELVLSRNQIMNLSQQQD---MHQMK 233 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L +LQ++VM RM P+ +F PRL+RDL+ + GK+ + + G+ T LD+ Sbjct: 234 MPLERLSALTSELQDAVMQARMQPLRRLFDSVPRLIRDLSAETGKEFNVVIEGADTRLDR 293 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 LIE I DPL HLVRN DHGIE P +R GK G + ++A I IEV DDG G Sbjct: 294 QLIEAIRDPLMHLVRNCADHGIESPAERAERGKPVAGLISIAATQDSSQIVIEVADDGRG 353 Query: 425 LNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 + ERI AKA +GL +++ M+D+EV I PGFSTA+ VT +SGRGVGMDVV+ + Sbjct: 354 FDSERIRAKAVERGLADADSVARMTDEEVYRFILEPGFSTAQAVTTISGRGVGMDVVRAH 413 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++ +GG + + S++G G+ + +PLTLAI + VR A + F LP V+E+L + Sbjct: 414 LEAIGGSIGLHSQKGAGSRFLLRIPLTLAIEPALIVRAAGQRFALPQKYVVEALDYYDGS 473 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 H + GER+L +R E LP+ L +F+V + +V++L+ GGR+ L+VD + Sbjct: 474 -HVIGEMDGERILRLRDEVLPVAPLAAMFDV-DENDASPDKVVIVLRLGGRKLGLIVDGI 531 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++VVK L ++K TILG+GSV LI+D + + Sbjct: 532 GDIQEIVVKPLSRFFQKDRIFCGCTILGEGSVILILDPAGM 572 >UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED86_9LACO Length = 681 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 150/384 (39%), Positives = 246/384 (64%), Gaps = 13/384 (3%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH---GDLITSMGQLQRNARD 316 ++ +IRV + ++D+ +NLV E+V+ ++ L D N G++ S+ Q+ R + Sbjct: 303 KNQAIRVDLTRLDRFLNLVSEIVVYRNQLE------DATNRESIGEIRDSLEQVSRLTSE 356 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQ+ V+ IRM + VFSR+PR+VRDL+ +L K+++L ++G TELDK+++ + +PL H Sbjct: 357 LQDLVLKIRMQQVSVVFSRFPRMVRDLSNQLNKEMKLEIIGEETELDKTVVSELSEPLIH 416 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 L+RNS DHGIE PE R GK VG + L+A +G + I ++DDG GL + I A A Sbjct: 417 LLRNSADHGIEDPETRKKLGKPEVGTITLAAYQEGNKVLITLSDDGKGLKPDVIKASAEK 476 Query: 437 QGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 +G+ + M+D E+ ML+F PGFSTA+++T++SGRGVG+D V+ I ++GG +E+ SK Sbjct: 477 KGIDTT-GMTDRELQMLVFHPGFSTAKKITNISGRGVGLDAVQAKIAELGGSIEMDSKVD 535 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GTT I LPLTL+I+ + V++ E F +PL+ V + RE D+ + E V + + Sbjct: 536 VGTTFIIKLPLTLSIIQALMVQIGKESFAIPLDVVERVVMVREKDIMQTSNQE-VCKFQE 594 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +PI+ K+ V + ++ I+V + G + Y +LVD+++GQ ++V+K ++ +K Sbjct: 595 GLIPIIRTDKLLQVPSSSSDKKYAIIV--KIGKQYYGVLVDKMVGQQEIVIKKIDPMLQK 652 Query: 617 VPGISAATILGDGSVALIVDVSAL 640 + ATILG+GS+ALI+DV+A+ Sbjct: 653 IKKYQGATILGNGSIALILDVNAI 676 Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 69/110 (62%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D S + FF+E+D+ L + +L L+ E + + +N+IFR AH++KG + T G+ Sbjct: 1 MADDNSVYRDLFFEESDDNLQTLNDSILELEQEPDNIDLINSIFRVAHTLKGMSATMGYD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 V+ + TH ME++ D + G+M++NTD I+L + D +QE +D + +E Sbjct: 61 VMTKLTHKMEDMFDLFKTGKMKINTDHISLVFKCLDKLQELVDDLRDDKE 110 >UniRef50_A4XHP7 Putative CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHP7_CALS8 Length = 550 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 146/402 (36%), Positives = 257/402 (63%), Gaps = 18/402 (4%) Query: 252 REKTTRSNEST-----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD---- 302 +E T+ NE S+R+ + K++ L NL GEL+ +S L+Q + +N D Sbjct: 136 KELRTKENEQENKKIDSVRIDIYKLNNLTNLAGELITCKSQLSQILNGFKEINVKDKEIS 195 Query: 303 -LITSMGQ----LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 LI+++ + L+R + +LQE + S+R++P++ VF + PR+VR++A K K+VEL + G Sbjct: 196 NLISNLEKGILRLERISFELQEGITSLRLLPIKNVFRKLPRIVREVAQKEDKEVELIIKG 255 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TE+DK ++E+I DPL H+VRN ++HGIE PE+R+A GK G + + A +G +I I Sbjct: 256 EETEIDKLILEKITDPLVHIVRNCVNHGIEKPEERIAKGKKPQGRITIEAYAEGEHIYIS 315 Query: 418 VTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 +TDDG G++ ++I AKA +G+ S+ +MS+ +V LIF PGFSTA++V D++GRGVG Sbjct: 316 ITDDGRGIDIDKIKAKALEKGIVTSDELLSMSEKDVIDLIFLPGFSTADRVDDIAGRGVG 375 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVK+NI ++ G +++++++ GT+ I++PLT+AI+ + V + +++LPL ++E+ Sbjct: 376 MDVVKKNIAELKGEIKVETQKDKGTSFLIVIPLTVAIIKTLLVLAGERLYLLPLEKIIET 435 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 ++ + + + G+++ ++GE +P L ++ + +I++ + + Sbjct: 436 VKINKNLIKSIT-GKKIYSIKGEIIPFFSLNEILGNEEDEDTRNYYFGIIVRYNNSKVGI 494 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 +VD+LIG++ VVVK L+ + GI +TILGDG V L+++ Sbjct: 495 IVDKLIGEYDVVVKPLDQFVGNIKGIVGSTILGDGRVVLLLE 536 >UniRef50_UPI00016C4BDB putative CheA signal transduction histidine kinases n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4BDB Length = 795 Score = 278 bits (711), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 159/393 (40%), Positives = 234/393 (59%), Gaps = 8/393 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSML--AQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 ++RV K+D+ +NL GELVI ++ L A R + D L ++ ++ R D+Q + Sbjct: 382 TMRVDQRKLDEYVNLAGELVIARNALVHAHRCFQTDRAARAVLKDAIDKVCRIVGDVQNN 441 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 M++RM+P+ +F R+PRLVRD+A L KQ+EL L G TELDK + E + DPL HLVRN Sbjct: 442 AMAMRMVPVGTIFQRFPRLVRDVAKSLAKQIELRLEGEDTELDKQVAEALSDPLVHLVRN 501 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 + DHGIE P++R AAGK G + L A +G I I+V DDG G++ ER+ AKA + G+ Sbjct: 502 AADHGIEAPDRRAAAGKPVAGTVTLRAGREGNAIVIDVQDDGGGIDPERVKAKAVAMGVL 561 Query: 441 VSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 ++ +S ++ LIFAPG STA V+D+SGRGVGMDVVK NI +GG V + S+ G Sbjct: 562 TADQAAALSREQALQLIFAPGLSTAAVVSDLSGRGVGMDVVKSNIAALGGAVTVHSQPGA 621 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT +R+ LPLTLA+ + V +F +P++AV E+L+ E D G R + +RG Sbjct: 622 GTRVRLTLPLTLAVTTVVLVESGGTLFGVPIDAVQETLK-VEPDGFRQLRGVRAVSLRGA 680 Query: 558 YLPIVELWKVFNVAGAKTEATQG--IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 P+ L + + + + VV+L G R+ + VD GQ ++V+K + Sbjct: 681 VTPVKSLAALIGLDAPEAAGPRDRVPVVVLNVAGARFGVAVDSFRGQQEIVLKPVPPLLG 740 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQR 648 + G+ ATI+GDG V LI+D L + + R Sbjct: 741 HLEGVGGATIMGDGGVVLILDPMGLYRLALDDR 773 >UniRef50_C7M283 CheA signal transduction histidine kinase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M283_ACIFD Length = 728 Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 165/390 (42%), Positives = 248/390 (63%), Gaps = 17/390 (4%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRS-SELDPVNHGDLITSMGQLQRNARDLQES 320 T++RV V +D+L+NLVGELV+ ++ + Q + SE L S QL A +LQE Sbjct: 190 TAVRVDVGLLDRLMNLVGELVLARNRVMQLAQSE----GSAALAASTQQLSIIASELQEQ 245 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM RM P++ +F++ PR+VRDLA +LG++VEL L G TELD+++IE I DP+THL+RN Sbjct: 246 VMKTRMQPIDTLFAKLPRVVRDLARELGREVELVLEGRDTELDRTIIEAIRDPMTHLIRN 305 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHGIE P++R + GK + G L + A H+GG++ I+V+DDG G++ E + A+A ++GL Sbjct: 306 AIDHGIEPPDERRSQGKAAHGVLRIDAYHEGGSVIIDVSDDGRGIDLEAVRARALARGLV 365 Query: 441 VSENMS---DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 ++ ++ EVA LIF PGFSTA V+ VSGRGVGMDVVK N++ +GG ++I S G Sbjct: 366 HADELARLGPREVAELIFVPGFSTATTVSAVSGRGVGMDVVKTNVESVGGSIDIDSDPGR 425 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL---AGGERVLEV 554 GT +R+ +PLTLAI+ + V + F +P A+ E ++ H L VL Sbjct: 426 GTRMRLRIPLTLAIIPALMVETHGQRFAIPQAALAELVRLELDGRHSLVEIVDHTPVLRR 485 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGI----VVILQSGGRRYALLVDQLIGQHQVVVKNL 610 R +P+++L + +A E +G+ VVIL +G + ++VD+++ ++VVK L Sbjct: 486 RDRLVPLLDLGAILGLAPPFPE--RGLDAVSVVILSAGATSFGIVVDRIVDTQEIVVKPL 543 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++ S ATILGDG VALIVDV + Sbjct: 544 GQFVSQLQCYSGATILGDGRVALIVDVGGI 573 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 1/128 (0%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F E+ E L ++ +L L+ + + + + + FRA H++KG G GF L+ H E+ Sbjct: 12 FLAESQENLDRFDRDVLALESDPSNRDAVASAFRAIHTLKGTCGFLGFGRLEGLAHDGES 71 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 LL R G ++++ + + L +D ++ LDA + + D ++ + L LA +A Sbjct: 72 LLARVRDGAVRVDAAVADALLALEDAVRRSLDAIAATGDEDDEHWEELRARLVALAEQAH 131 Query: 132 GETPSAVT 139 E P +V Sbjct: 132 -EAPRSVA 138 >UniRef50_A6G722 Chemotaxis protein CheA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G722_9DELT Length = 795 Score = 276 bits (705), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 155/404 (38%), Positives = 241/404 (59%), Gaps = 25/404 (6%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSML---AQRSSELDPVNH-GDLITSMGQLQRNARD 316 S ++RV + ++D L+NLVGEL + + L R NH G L ++ G+ R +D Sbjct: 350 SQTVRVDLRRLDHLMNLVGELALVHANLTNIGDRMQRTQLANHIGGLSSTSGEHLREFQD 409 Query: 317 -----------LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 LQ+ ++ +RM+P+ VF + R+VR L + K + L + G+ TELDK Sbjct: 410 QLRVMNRRLSLLQQGILEVRMVPLGQVFDKLARVVRKLGRESQKDIRLAISGAETELDKL 469 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E + DPL H++RN++DHGIELP +R+A GK G + LSA +G + IE+TDDG G+ Sbjct: 470 IVEELSDPLMHMIRNAIDHGIELPAERVAVGKPRAGKISLSAFQKGNRVVIELTDDGRGM 529 Query: 426 NRERILAKAASQGLTVSENMSD---DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + I KA +G +E SD + LIF PGFST ++ T++SGRGVGMDVVK NI Sbjct: 530 DWRIIRDKAVKRGFVSAEESSDITPGQAINLIFTPGFSTRDKATELSGRGVGMDVVKTNI 589 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 ++ G +++ S+ G G+ RI LP+TLAI+ + + + + F +PLN+V+ES+ + ++ Sbjct: 590 SRLSGMIDVASEPGRGSRFRITLPVTLAIIQALVIETSGQTFCIPLNSVLESIMVQSDEI 649 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVA------GAKTEATQGIVVILQSGGRRYALLV 596 + G E V+ VRG LP++ L KVF + ++ + VV++ R L+V Sbjct: 650 QTIEGHE-VVSVRGRTLPLIHLSKVFELGEENPIRDPRSNYDRLYVVVVGLAQHRVGLVV 708 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 D+L+GQ VV+K + R+VPGI+ AT LGD L++DV+ L Sbjct: 709 DELLGQQDVVIKPIGRALRQVPGIAGATELGDNRTVLLLDVATL 752 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 5/121 (4%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQ-----LNAIFRAAHSIKGGAGTFGFSVLQETT 66 F EA E++ + LL ++ + D + LN FR+ H++KG + G + + + + Sbjct: 7 FVSEAQEIIETFSRQLLEIEGQLRDGDDYDPDLLNGAFRSVHTLKGLSSLSGVNEIVDLS 66 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +EN LD R G++ LN ++L E+ D+ L + D L +L Sbjct: 67 HKLENTLDALRLGKLPLNQSALDLLFESVDLFGRLLAGVVEPDGGQPVEVDSFLAKLAKL 126 Query: 127 A 127 A Sbjct: 127 A 127 >UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAP5_PHEZH Length = 1001 Score = 276 bits (705), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 160/379 (42%), Positives = 235/379 (62%), Gaps = 8/379 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 +IRV+V+ ++ L+ +V ELV+ ++ L Q + L+P + +L + +LQE VM Sbjct: 327 TIRVSVDALEHLMTVVSELVLIRNQLIQ-TLRLEP--ESPFAAPLNRLNQVTSELQEGVM 383 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 + RM P+ +++ PRLVRDLA LGK ++L ++G TELD+ ++E I DPLTH++RN+ Sbjct: 384 TTRMQPISGAWAKLPRLVRDLAQDLGKSIDLVMLGQETELDRQVLELIKDPLTHMIRNAA 443 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL--- 439 DHG+E P +R AAGK G + L A H+GG I IEV DDG GL+ E+I AKA + GL Sbjct: 444 DHGLETPAERRAAGKPETGRITLQARHEGGAIVIEVADDGRGLSAEKIRAKALASGLITP 503 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 T +E MSD + LIF PGFSTA QVT VSGRGVGMDVV+ NI+K+GG +E+ + G GT Sbjct: 504 TQAEQMSDADARQLIFLPGFSTASQVTAVSGRGVGMDVVRTNIEKIGGAIEVGATDGGGT 563 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA--GGERVLEVRGE 557 I +PLTL I+ + V E F +P +AV+E + A H + G VL +R Sbjct: 564 RFTIRIPLTLTIVSALIVECCGERFAMPQSAVVELVSASGASGHAIEYIDGSAVLRLRDR 623 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 LP+V L + + + + +++ + G + ++VD++ ++VVK + + R + Sbjct: 624 LLPLVSLQSLLGLEPVGEPSNETCILVARVGAFTFGVIVDRVFDTEEIVVKPVATVLRHL 683 Query: 618 PGISAATILGDGSVALIVD 636 S ATILGDGSV LI+D Sbjct: 684 KLYSGATILGDGSVILILD 702 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D F E E L ++ L+ + + D E L+ IFR H+IKG G G LQ Sbjct: 8 LDDLVSDFIAETREGLEALDSELVRFEQQPDDPETLSGIFRLIHTIKGTCGFLGLMRLQT 67 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-QEPD 112 H EN+L R G + + ++ L+T D+++ +DA + EP+ Sbjct: 68 VAHAAENVLGGFRDGVVPVTPTAVSAVLDTVDLIRSLVDALASTGAEPE 116 >UniRef50_A0LDL8 CheA signal transduction histidine kinases n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDL8_MAGSM Length = 1104 Score = 275 bits (704), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 160/429 (37%), Positives = 247/429 (57%), Gaps = 52/429 (12%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV+V +D+LIN GELV+ ++ L + S+++ + + + L +QE VM Sbjct: 368 TLRVSVSLLDELINNAGELVLARNQLVRASADV-ATQFPNFTSLVQNLDSITSRIQERVM 426 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 RM P+ VF+++PR++RDLA KL K+++L + G +LDKS+IE + DPLTH++RN Sbjct: 427 QARMQPVSVVFNKFPRIIRDLARKLNKKIDLEIRGGEVDLDKSVIEHLSDPLTHMIRNVA 486 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV- 441 DHGIE P+ R+A GK G + L+A H+ G + I ++DDGAG++ RI AKA +GL Sbjct: 487 DHGIEEPDARVAVGKPDAGQVELAAYHENGMVNISLSDDGAGIDAVRIKAKAMEKGLITE 546 Query: 442 --SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 ++ M ++E LIFAPGFS A++++DVSGRGVGMDVV+ NI+K+GG V I+SK G GT Sbjct: 547 RQADTMPEEEALGLIFAPGFSMAKKISDVSGRGVGMDVVRTNIEKLGGTVHIESKVGKGT 606 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH---PLAGGERVLEVRG 556 I + LPLTLAI+ M V + F +P ++E ++ E+D + G VL +R Sbjct: 607 RIILKLPLTLAIIPAMIVSAGKQRFAIPEIGLVEIVRVAESDRANQIEVVGNAPVLRLRN 666 Query: 557 EYLPIVELWKVFNV--------------------------------AGAKTEATQ----- 579 LP+V+L V + A K A + Sbjct: 667 MLLPLVDLADVLGIQRVWPPESESPERRQNLHERRSVRTDGKSEPAAETKKSAARRDSSD 726 Query: 580 --------GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSV 631 +++L GG + ++VD+++ ++VVK L S ++ P SA TILGDG+V Sbjct: 727 RRAPGGLVAYIMVLNVGGNEFGMVVDEVLDSEEIVVKPLPSFFKDNPCFSATTILGDGTV 786 Query: 632 ALIVDVSAL 640 +LI+D + + Sbjct: 787 SLIIDYAGV 795 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 2/104 (1%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDA--EQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 F EA E + +E LL L+ + D E +N +FR+ HSIKG AG FG + + + +H+M Sbjct: 15 FVQEAVEHIETIEPDLLTLEEQGADTDTEVINRLFRSVHSIKGSAGFFGLTAISKLSHIM 74 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA 113 ENLL + R + + + + L D +Q ++ S++ DA Sbjct: 75 ENLLGKVRERAIVASPAVSDSLLSGLDKLQTMINDVSNSEKVDA 118 >UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYF4_9GAMM Length = 664 Score = 275 bits (702), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 213/684 (31%), Positives = 350/684 (51%), Gaps = 60/684 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQ-LNAIFRAAHSIKGGAGTFGF 59 MSMD D + + EA ELL + L L+ APD++ L ++FRA H++KGGAG Sbjct: 1 MSMD-PDILRDYVSEARELLEQAQSDALALEC-APDSDAVLASLFRAFHTLKGGAGFLDA 58 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L E TH +E+LLD+ R + + I++ L+ D++Q LD + P+ D Sbjct: 59 DALVEWTHHLEDLLDKLRSHVLPVTPTTIDVILKGLDVIQCMLDELGRGVYPNPGPSDLG 118 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA-GEVDLLEEE 178 + ++E +P +V +E ++S +LK G+V + E Sbjct: 119 QRICALASVEDVHTSPPESASENVRPIAEQPTGVESAESGTLQAWQKLKPDGKVGVYVER 178 Query: 179 L------GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF----VIEADQITFETVEV 228 + G + + G D+ S + + E + A+ V+ + +V Sbjct: 179 VSEGKDKGAVCVESASKAGDDAASDTISDEEFEQVLDALYGHKAPGVVPPAERRVMDSQV 238 Query: 229 SPKISTPPVLKLAAEQAPTGRV-----EREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 + P L A AP V ER +T +++RV ++D ++N VGELV+ Sbjct: 239 ASTAVLPGALPQATAPAPVTSVAAVKTERPSSTSETPESTLRVESARLDSVMNQVGELVL 298 Query: 284 TQS-MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 ++ L+ + + H DL ++ D+Q +VM +RM P + +F + PR+VRD Sbjct: 299 LRNRFLSAMQTTIG--EHEDLARIAREMDLTVNDMQSTVMRLRMQPCKRLFQQLPRVVRD 356 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 ++ +LGK+V L VG E+DK +++ + PL HLVRNSLDHGIE P R+ GKN + Sbjct: 357 VSRQLGKRVNLQFVGEDVEIDKKVVDALSAPLIHLVRNSLDHGIETPADRVMLGKNEIAT 416 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGF 459 L +SA H G + IEV+DDG G++ +++ KA +GL E +++ + LIF PGF Sbjct: 417 LRISAVHLGDKVRIEVSDDGNGIDAQQVKQKAVEKGLIGQEEAARLTESDAIDLIFRPGF 476 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 ST + VT+ SGRGVGMDVVK+ Q + G +++ + GTGTTI + PLTLA+L + +R+ Sbjct: 477 STNDVVTEYSGRGVGMDVVKKTTQSLRGRLDVHTNLGTGTTIAMEFPLTLAVLPVLYLRL 536 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL---------PIVELWKVFNV 570 +V+ +P+++V + D+ P +R+ +V+G L P V+L ++ + Sbjct: 537 RRDVYAIPISSVSSLI-----DVDP----QRLYQVQGRALYQAGPEQIVPFVDLGEILHQ 587 Query: 571 AGAK--TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL----ESNYRKVPGISAAT 624 + TE T GI+ R L+V +++G VVK + ES++ + AT Sbjct: 588 RPIQLGTEPTDGILT------ERGLLVVSEVLGNEDSVVKPIDFLSESHWYQ-----GAT 636 Query: 625 ILGDGSVALIVDVSALQAINREQR 648 + G G V LI+D++ L+ E + Sbjct: 637 LSGKGEVVLILDIANLKHSQAEPK 660 >UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7B3_COPPD Length = 684 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 150/381 (39%), Positives = 241/381 (63%), Gaps = 14/381 (3%) Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 IRV E V+ L++ + ELV+ + A+ + N L + +L R+ Q + + Sbjct: 305 IRVPEEHVNNLMSAISELVLEK---AELELAIKTGNEEALWSLYERLSRSINLAQGEITA 361 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM P+ +VF R+PR+VRDL+ L KQV + G TE+D+++I+R+ DPL HL+RN++D Sbjct: 362 LRMTPLSFVFERFPRMVRDLSRDLQKQVRFIMEGGDTEIDRTIIDRLGDPLVHLLRNAVD 421 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HGIE PE R+ AGK+ G + L A H+G N+ I V DDGAG++ ++LAKA +GL S+ Sbjct: 422 HGIERPEDRIKAGKDPTGTVRLKAYHEGNNVYIVVEDDGAGIDTAKVLAKAVERGLVTSD 481 Query: 444 N---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 +S +E+ +F PGFST++ V+++SGRGVGMDV+K ++++GG V+++S G GTT Sbjct: 482 QASFLSQEEIFSFLFLPGFSTSDTVSEISGRGVGMDVLKNTVEELGGTVQVRSVLGKGTT 541 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 + + LPLT+AI+ + V+V +F LPL+ V E EA G VL +RGE LP Sbjct: 542 VIMRLPLTMAIISALLVKVNGLIFALPLSVVEEISNDVEAVKETPQGN--VLLLRGELLP 599 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP-G 619 + + + N+ +V++++G ++ ALLV + +G+ ++V+K L+S + VP Sbjct: 600 VYSVAGLLNLP---DNGQNNHIVVIRNGQKKAALLVAETVGKQEIVIKPLKSRF--VPRY 654 Query: 620 ISAATILGDGSVALIVDVSAL 640 + AT+LGDG++ L+V+ S L Sbjct: 655 VDGATLLGDGTIGLVVNTSML 675 Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust. Identities = 26/99 (26%), Positives = 52/99 (52%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D++++ F E+ + + + +L++L+ + + + L +FRAAH++KG + T GF L Sbjct: 3 DMNEYLPIFLQESYDYINLLNNNLVLLEQDPSNKQALAEVFRAAHTLKGMSATMGFQFLA 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 + H +E+ L R ++ I L D M+ Q+ Sbjct: 63 DAAHELESALQIYRDTHEPVDEKAIELGFRVLDYMENQM 101 >UniRef50_D2QXD7 CheA signal transduction histidine kinase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QXD7_9PLAN Length = 987 Score = 273 bits (697), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 156/373 (41%), Positives = 229/373 (61%), Gaps = 17/373 (4%) Query: 279 GELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPR 338 +L I Q L++ S + VN +L ++ QL R A +Q+SVM RM+P+ +FSR+ R Sbjct: 606 ADLQIIQRELSRLSKLRNRVN--ELFEAVHQLDRVADGIQKSVMDTRMVPIGPLFSRFKR 663 Query: 339 LVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKN 398 +VRD+ GK + L + G TELDK +I+ + DPL H+VRNS DHG+E R+AAGK+ Sbjct: 664 VVRDVTRINGKDIRLDIRGEKTELDKRMIDELGDPLIHMVRNSADHGVETSADRVAAGKS 723 Query: 399 SVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIF 455 + G + L A H+G +I I+V DDG GL+ +RIL KA +GL +E M+ ++ LI+ Sbjct: 724 AQGCITLDAFHRGNSIVIQVIDDGKGLDSQRILKKAIERGLVSEADAERMTSHQIYQLIW 783 Query: 456 APGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGM 515 PGFSTAE+VT++SGRG+GMD+V+ I+ + G VE+ S G G T I LPLTLAIL + Sbjct: 784 EPGFSTAEKVTEISGRGMGMDIVRSKIEGLSGTVEVDSTPGQGATFTIKLPLTLAILPSL 843 Query: 516 SVRVADEVFILPLNAVMESLQ-PRE--ADLHPLAGGERVLEVRGEYLPIVEL-----WKV 567 V +VF LP+ +++E + PR + +H G +RG + +V L W+ Sbjct: 844 MAAVDGDVFSLPIESIVEIVSVPRRQLSTVH----GMLTASIRGRIVSVVNLKDIFTWRQ 899 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 + E T +V+L G L+VD ++G+ VV+K+L NYR V GI+ A+ILG Sbjct: 900 NSSRSTALETTDSTLVVLGHDGCEIGLVVDSVLGEDDVVIKSLAENYRNVRGIAGASILG 959 Query: 628 DGSVALIVDVSAL 640 DG V+LI+D+ L Sbjct: 960 DGRVSLILDIPTL 972 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 10/107 (9%) Query: 12 FFDEADELLADMEQHLLVL----------QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 F DEA++LL + + LL L QP + D+E + ++FR+AHS+KG + G Sbjct: 20 FLDEANQLLVKLNEDLLTLDEWVASRQAGQPSSFDSELMTSMFRSAHSLKGLSAMLGLPH 79 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS 108 + + TH +EN+ D AR+ E+QL++ + + D ++ +D K + Sbjct: 80 INQLTHRVENVFDAARKSELQLDSSNVQVIFSAIDSLEAMIDMLKNT 126 Score = 43.9 bits (102), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 4/147 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + F DEAD L + + L+ + A D+ ++ AH IKG A + G + Sbjct: 200 SRYLAIFIDEADLSLDSLTETLVSDEQLAGDSAT-ESLLITAHRIKGSAASLGLHRAAKL 258 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS--QEPD-AASFDYICQA 122 +HLME+LL + +L +++ L++ D ++ + + K + P AA+ +C + Sbjct: 259 SHLMEDLLQDLHNSGCRLKPSMVDALLKSTDALRGYVASLKAGVPKYPQFAAAARDLCSS 318 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEP 149 A A + P++ + S + + P Sbjct: 319 RELCASIADTKMPTSSAQESPASTAAP 345 >UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FDD6_SORC5 Length = 754 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 215/734 (29%), Positives = 351/734 (47%), Gaps = 112/734 (15%) Query: 10 QTFFDEADELLADMEQHLLVL----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + FF EA E++ + + LL L + D + +N +FRA H++KG AG FG + + Sbjct: 10 EEFFSEAQEIVEGLGRDLLALDEAVRTNKVDPDVINDVFRAVHTLKGLAGLFGATRMATL 69 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H +E LLD R G ++++ +++L + ++ L K ++ D + + L Q Sbjct: 70 SHELEELLDNLRLGRIEVSASVLDLLFRSVELYGRILQNEKDGRDAPMPEVDDLLRQLHQ 129 Query: 126 LALEAKGETPSAVTRLS---VVAKSEPQDEQSRSQSPRRIILSRLKA-----------GE 171 A + P L + +E ++ + R+ + L RL+ + Sbjct: 130 DAGPSAAGLPDDNYDLDPGLLSVLTEYEEHRLRTNIASGMTLFRLRVQFHLATIDQALDD 189 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE----TVE 227 + + + G + T GAD D E DI +E Q VE Sbjct: 190 LKITAKPYGEIITYLPTGAGADQ-------DSIELDILMASRAPLEELQRALHQAGAAVE 242 Query: 228 VSPK--------ISTPPVLKLAAE---QAPTGRVER----------------EKTTRSNE 260 P+ ++ P + ++A APTG V R + R E Sbjct: 243 EIPRRNNNGHGRVAPPGMPSMSAALRGGAPTG-VSRAVDLTGSMSAASPPSSARGNRKGE 301 Query: 261 STSIR-------VAVEKVDQLINLVGELVITQSMLAQRSSELDPV-NHGDLITSMGQLQR 312 +SIR V + K+D+L+N+VGEL + +S L + L +L + +LQR Sbjct: 302 LSSIRSVAQTVRVDIHKLDRLMNIVGELALVRSALGRLVERLRAAPTERELSLDLHRLQR 361 Query: 313 ----NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368 + +Q ++ +RM+P+ VF + R+VR ++ K V L + G+ TE+DK ++E Sbjct: 362 TFDRHLAQMQAGILEVRMVPLGQVFDKLARVVRQISRDADKLVNLVITGAETEVDKLIVE 421 Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428 + DPL H++RN++DHGIE R A GK +VG + L+A +G ++ IE+ DDG G++ + Sbjct: 422 ELSDPLMHMMRNAIDHGIESKSMREAVGKPAVGTIALNAFQKGNHVVIEIEDDGKGIDVD 481 Query: 429 RILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 ++L A +G+ E+ S EV LIF PG ST V+++SGRGVGMDVVK NI K+ Sbjct: 482 KLLDAALRRGVMTPEDARTTSYREVLNLIFQPGISTKTDVSELSGRGVGMDVVKTNISKL 541 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 GG +++ S+ G GT + + LP+TLAI+ + VRVAD +F +PL V E++ EA + + Sbjct: 542 GGVIDVHSEPGIGTKMTVTLPITLAIISALIVRVADRLFAIPLTNVQEAVALDEATVRQI 601 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVA---------------------------------- 571 G E ++ +R L + L ++F + Sbjct: 602 DGRE-MITLRNSTLQLCYLARLFGLNEEEELSARIAGLLGGARGGSAARAAVGGGRRGDG 660 Query: 572 -----GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 G + + + +V+ G RR L+V LIGQ VV+K L + V G S AT L Sbjct: 661 GRATLGLQGGSKRKYIVVASVGARRLGLVVSTLIGQQDVVIKALGPSLSSVRGFSGATEL 720 Query: 627 GDGSVALIVDVSAL 640 GD +AL++D AL Sbjct: 721 GDQRIALVLDAPAL 734 >UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWZ2_SYNWW Length = 927 Score = 271 bits (693), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 147/391 (37%), Positives = 248/391 (63%), Gaps = 14/391 (3%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDL 317 SIRV+ +K+++L+N++GEL+I+++ + +S++ P ++ ++ R + +L Sbjct: 527 SIRVSQDKMNRLMNMIGELLISKNRVFHLASKIGLEYQLPGLAREVKDIAAEVARISDEL 586 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q+++MS RM+P+ +F RYPR +RD++ K GK V+L ++G TELDK++IE I DPL H+ Sbjct: 587 QDAIMSARMVPLRILFQRYPRTIRDISRKAGKSVDLVVLGEETELDKTVIEAINDPLVHM 646 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RN++DHGIE P+KR A GK G + L A +QG ++ IE++DDG G+N E I KA + Sbjct: 647 LRNAVDHGIEAPDKREAQGKPRQGKIYLKARYQGNSVIIEISDDGKGMNPEEIKLKALGK 706 Query: 438 GLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 GL E+MS++E LIF PGFST E+V+++SGRGVGMDVVK NI+++GG V + S+ Sbjct: 707 GLIRPEQIESMSNEEAYQLIFLPGFSTREEVSELSGRGVGMDVVKNNIEQVGGTVTMSSQ 766 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 GT + +PL+++I+ G+ V++ + FILPL+++ E+++ + ++ ++ Sbjct: 767 LNQGTNFLLRIPLSMSIIRGLMVKMGSQSFILPLDSIEETVKLPANKIRSYKKI-KIADI 825 Query: 555 RGEYLPIVELWKVFNV-----AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 R E + ++ L + ++ A T + +V++ G R+ L+VD + + VVK Sbjct: 826 RDEIVHLIYLKDLLSLKEDFAAPVITFDMRIPIVVINYDGNRFGLVVDSFQHEQEFVVKT 885 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSAL 640 L + + ATI+GDGSV LI++ L Sbjct: 886 LAEELAALKLYTGATIMGDGSVVLILNPGQL 916 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 39/111 (35%), Positives = 58/111 (52%), Gaps = 15/111 (13%) Query: 1 MSMDISDF----YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGT 56 M ++IS F Q FF+E E L +E++ + L+ + D E+LNAI R HSIKG AG Sbjct: 177 MKIEISSFREQLLQDFFEETGEHLDTIEKNCVELEKQPEDLERLNAILRGFHSIKGAAGV 236 Query: 57 FG-----------FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKD 96 F ++ +H E+LL R + L++ +I+L LET D Sbjct: 237 INSMQEEETPDDPFEKIKSLSHAAESLLQTFRNQQAPLSSPVIDLILETVD 287 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/96 (32%), Positives = 59/96 (61%), Gaps = 1/96 (1%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q +E+ E L +E+ +L L+ E D+EQL+A+FRA HS+KG A +++T Sbjct: 11 EILQGIVEESSEHLNGIEEGILKLEAEF-DSEQLDAVFRAMHSVKGVAAFLDLIPIKDTA 69 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL 102 H +E+ + + ++G + ++I ++ L+ DI+Q Q+ Sbjct: 70 HSLESFMTDMKKGLYPVTSEITDILLKGVDILQLQI 105 >UniRef50_Q64CE2 Chemotaxis histidine kinase n=3 Tax=environmental samples RepID=Q64CE2_9ARCH Length = 524 Score = 271 bits (692), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 175/476 (36%), Positives = 267/476 (56%), Gaps = 39/476 (8%) Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 G VDLL E L L TL + ++ G + D TA+ ++ E Sbjct: 84 GTVDLLLESLDGLETLVE---------SVATGKTVKLDFTAL------HKKLKNIPAEKK 128 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 + P V AE A GRV S SIR+++EK+ L NLV EL I + L Sbjct: 129 EDVELPTV---TAEGADAGRV----------SPSIRISIEKIQALQNLVEELAIAKMSLL 175 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 Q +S+ +H +L + R+ +LQ+ VM +RM P+ Y+F ++PR VRDL+ K GK Sbjct: 176 QIASKY--ASH-ELNEITATIDRHTSELQDRVMQMRMFPVGYLFDKFPRAVRDLSKKTGK 232 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 +V+ + G ELD+ +++ I D + HL+RN++DHGIE PE R AGK G +ILSA Sbjct: 233 EVDFIVSGKEIELDRLVLDEINDAVLHLLRNAVDHGIEKPEDRKNAGKADKGKVILSAIR 292 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVT 466 +G ++ + V DDG G+ E + A + + E M+D +V L+ PG STA ++T Sbjct: 293 EGNHVVVSVEDDGRGIVIEELKKIAVEREIITQEEASRMNDADVYELLSEPGLSTAREIT 352 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 D+SGRGVG DVV + +GG V I+S++G GT + + LPLT+AI+ + V V DE + + Sbjct: 353 DISGRGVGFDVVTSKVNSLGGSVRIRSEKGRGTNVELHLPLTIAIIKALLVGVEDERYAI 412 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL+++ E + E DL + G E + R + LP++ L + +V G K +G VV+++ Sbjct: 413 PLDSIREIVAVGEKDLKSVEGKE-IFRYREQVLPLLRLKNILDVPGDKDR--RGPVVVVE 469 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 + + L+V +LIGQ ++VVK L ++ + ATIL DG+VALI+DV L + Sbjct: 470 RAEKFFGLMVGRLIGQQEIVVKPL--RFKGRTEFAGATILADGTVALILDVGGLMS 523 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +D+S + + F DE+ E L + ++LL L+ E+ + + LN FRA H++K A T GF + Sbjct: 2 VDLSQYKELFVDESREHLQCISRNLLTLEKESDNTDALNETFRAVHTLKSMAATMGFPDM 61 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKD 96 +E +H MEN+LD R+G + ++L LE+ D Sbjct: 62 EELSHEMENVLDVLRKG-GEPGEGTVDLLLESLD 94 >UniRef50_Q2FMT1 CheA signal transduction histidine kinases n=4 Tax=cellular organisms RepID=Q2FMT1_METHJ Length = 1010 Score = 271 bits (692), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 164/469 (34%), Positives = 277/469 (59%), Gaps = 19/469 (4%) Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS-PKISTPPVLK 239 HL+ ++++ +D+ + ++ ++ + + +++ I +V V P+IS P Sbjct: 315 HLSPKREIIEDSDTYNGVMDILLSTVEPQEKIHALLKGSDIKNYSVRVEVPEISKEPGAA 374 Query: 240 LAAEQAPTGRVER----EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 L + + R +K + E +IRV ++++D ++NLV +LVI + L Q + + Sbjct: 375 LEGSDSTSFAGIRASSADKAEKKREVKNIRVDIDRLDHMMNLVEDLVINRGRLEQIAQQY 434 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 +L ++ + R+ DLQ +M IRM+P+ ++F+R+PR VRD+A K GK+V+ + Sbjct: 435 ---KIKELDETLNMVGRSVSDLQVMMMDIRMIPLNHIFNRFPRTVRDIAAKEGKEVDFVV 491 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TELD+S+++ + DPL HL+RN+LDHGIE P+ R+A GKN G L LSA N+ Sbjct: 492 EGGDTELDRSVMDGLNDPLLHLIRNALDHGIEPPDVRIANGKNPKGRLTLSASRDKDNVI 551 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I + DDG G+N E+I KA +GL E +MSD + L+F PGFSTA+++TD+SGRG Sbjct: 552 IVIEDDGGGVNVEKIKKKAIERGLITEEIAASMSDQDAYDLLFQPGFSTADKITDISGRG 611 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VG+DVVK I + G ++++S G G+ ++LP T+AI+ M +R+ + +P+ V Sbjct: 612 VGLDVVKTTIASLQGTIKLESVPGQGSRFELVLPPTMAIVMVMMIRINGKRCAIPITNVA 671 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVILQSGGRR 591 E + + GE +L +R E I+ L+++ ++ G +K+E ++V+LQ+G R+ Sbjct: 672 EVASLAAFPIQNIGNGEGLL-MRDE---IIVLYRLDDMLGRSKSEE---VIVVLQNGNRK 724 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 A++ D + GQ +VV+K L G+S TI GDG V ++DV A+ Sbjct: 725 GAIIADLIEGQQEVVIKPLSKFVGACEGVSGVTIPGDGEVVPVLDVKAI 773 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 58/100 (58%), Gaps = 1/100 (1%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ + + E+ E L + +LLVL+ + D+ ++ IFR+AHS+KG + + GFS ++ Sbjct: 3 DLDAYRSLYVAESRENLEGIVSNLLVLE-KGTDSHAIDEIFRSAHSLKGMSASMGFSHME 61 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD 103 E H +E++ + R G +++ +++ L D ++ +D Sbjct: 62 EICHALEDVFSQIRSGRLEVTQSLVDDLLGGADDIELMID 101 >UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A0_THEAS Length = 679 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 159/385 (41%), Positives = 245/385 (63%), Gaps = 9/385 (2%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 S ++RV + ++D+L+NLVGELVI ++ + +R ++ + D + QL R + ++QE Sbjct: 299 SRTVRVDIGRLDKLMNLVGELVIGRARI-ERLAQETKIKAFD--EPLSQLGRISGEIQEL 355 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 V +RM+P+ VF R PRLVRDL+ ++GK+V L + G TELD+++I+ I DP+ HL+RN Sbjct: 356 VTKLRMVPVSMVFDRLPRLVRDLSRQMGKEVRLVVEGRETELDRTVIDEIGDPMVHLLRN 415 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 SLDHG+E PE+R GK G + ++A +G + IEV DDG G++ ++ KA +G+ Sbjct: 416 SLDHGLESPEERERNGKPREGTITVAAYQEGNGVIIEVQDDGRGIDTAKVRRKAVERGIV 475 Query: 441 VSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 +E M+D+E LI PGFSTA+ VTD+SGRGVGMD VK ++ +GG ++ SK G Sbjct: 476 TAEQAQMMTDEEAIRLILLPGFSTADVVTDLSGRGVGMDAVKSKVESLGGQFQVFSKLGE 535 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + +RV DE++ + L V E+L ++++ + G V VRGE Sbjct: 536 GTRVVIRLPLTLAIVLALLIRVGDEIYAISLENVEETLLVPKSEIKYVHGTP-VTTVRGE 594 Query: 558 YLPIVELWKVFN--VAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 L + +L + + V E +VV + R +VD +GQ ++V+K L + Sbjct: 595 ILTLSDLAGILSTPVDREGVEEHPVVVVRVGRDRNRIGFVVDDFVGQQEIVIKPLGKLLQ 654 Query: 616 KVPGISAATILGDGSVALIVDVSAL 640 KV G++ ATILGDG+VALI+D ++L Sbjct: 655 KVRGVAGATILGDGNVALILDAASL 679 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 3/154 (1%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD+S + F DEA + L ++ + LL + D +N IFR AH+ KG + T GF Sbjct: 3 NMDMSQYIGAFLDEATDQLKNLNELLLAAEQNQSDMGIINEIFRVAHTFKGMSATMGFDS 62 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + TH ME+LL AR GE LN++ ++L + D + +D + + + Sbjct: 63 MAGLTHAMEDLLGLARSGEHVLNSEDVDLLFKCLDAITAMVDNIRGGGSDKDVDVKALVE 122 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR 155 L +L +A E P+A + + V K EQ R Sbjct: 123 QLHRLVNKAH-EAPAA--KPAKVGKKVELTEQER 153 >UniRef50_B6BNV1 Chemotaxis protein CheA n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BNV1_9PROT Length = 922 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 146/415 (35%), Positives = 253/415 (60%), Gaps = 13/415 (3%) Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + ++ + +VE KT ++++ E +D L+N+VGEL++ ++ L + + + H Sbjct: 508 SIKKVESKKVETHKTVVGK---TVKIDQESIDSLMNVVGELLVAKNSLPYLADNVVGMTH 564 Query: 301 G----DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 +++ + R + LQ+ +M +RM+P+ YVF RYP+LVRD++ KLGK+V+L + Sbjct: 565 ETIKREIMDKYIFINRLSEQLQDLIMGMRMLPISYVFDRYPKLVRDISKKLGKKVKLEMY 624 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G T+LDK++IE + DP+ H++RNSLDHG+E+P+ R GKNS GN+ L A Q I I Sbjct: 625 GGETKLDKNMIEMLADPMIHIMRNSLDHGVEMPDVREQKGKNSSGNVTLKAFAQSDKIII 684 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 E+ DDGAG+N +R+ K +GL E +S+DE+A L+ PG STAE++T+ SGRGV Sbjct: 685 EIQDDGAGINVDRVAGKVLEKGLMTPEQIDALSEDEMAELVLLPGLSTAEEITEFSGRGV 744 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK++I+ GG + I++K GT I + +P++LA+ + +++ D + LP+++V E Sbjct: 745 GMDVVKKSIEGFGGSIGIKTKPNQGTLITLSIPMSLAVTSLLHIQMNDIHYGLPMDSVSE 804 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 +++ +++ L E + +RGE +P++ + + N + E +V+L A Sbjct: 805 TVKIYRSEIEYLH-NEPFVYIRGEVIPLLFIKSMLNEKVVEDEPLS--IVVLNIKNNLLA 861 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 ++V++ +GQ VV K L K P S +LG+G + + +D L I+++ + Sbjct: 862 VVVNKFLGQLDVVQKPLVGILEKHPLFSGTALLGNGQIIMAIDPIGLLGISQKLK 916 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 3/134 (2%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F +EA E LA +EQ++ + D E LN++FRAAH++KGG+G GF +++ TH Sbjct: 6 EQFLNEARENLAFIEQNIEDIG--GADPELLNSVFRAAHTLKGGSGIVGFDSVRDITHHA 63 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 E+LLD R G + + + D + ++A +++Q A D + + + L+ E Sbjct: 64 EDLLDMLRDGRIAFADGMTEALFDAFDEVLNLIEAAEETQGIVEADEDTLKKIITSLS-E 122 Query: 130 AKGETPSAVTRLSV 143 G+ AV V Sbjct: 123 QMGKDAEAVASWEV 136 >UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B4 Length = 675 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 154/383 (40%), Positives = 231/383 (60%), Gaps = 7/383 (1%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV E++DQL++ +GELVI ++++ + + D I M R+++ LQ VM Sbjct: 288 TVRVDAERLDQLMHFMGELVIHRTVVETLAGDADVPGLQQAIQDMA---RSSQALQAMVM 344 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 +RM+P+E VF R+PRLVRDL+ KL K+VEL LVG TELD+++++ + DPL HLVRN+L Sbjct: 345 QVRMIPVEAVFLRFPRLVRDLSSKLSKEVELQLVGQETELDRTVVDALGDPLVHLVRNAL 404 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHG+E P++R AAGK G L +SA H GGN+ I V DDG G++ ++ KA +GL Sbjct: 405 DHGLEPPDEREAAGKPRTGVLEISARHAGGNVVISVRDDGRGVDPAKVAQKAFERGLISE 464 Query: 443 ENM---SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E + A L+F GFSTAE +D+SGRGVGMD V+ I+++GG V + S+ G G Sbjct: 465 EAIPAVDSQRAAELLFTAGFSTAESTSDISGRGVGMDAVQAKIRELGGEVIVDSEFGVGM 524 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 T I LPLTLAI+ + V F +PL+ V +L+ + + +A G+R+L +R L Sbjct: 525 TASIRLPLTLAIMSALLVEAEGMPFAVPLDRVERTLRLEDHAVRSVA-GQRMLVLRDGVL 583 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+++ + + VI++ RR AL V L+GQ ++V + L Sbjct: 584 PLIDAGEALAGRVVPSGEAHDHAVIVRGRDRRLALAVGTLVGQRELVTRPLPPEVSDRAA 643 Query: 620 ISAATILGDGSVALIVDVSALQA 642 +S +L +G ++LIVD AL A Sbjct: 644 VSGGAVLSNGEISLIVDCDALTA 666 >UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase cheA n=1 Tax=Heliobacillus mobilis RepID=Q0PIE6_HELMO Length = 893 Score = 269 bits (688), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 154/384 (40%), Positives = 246/384 (64%), Gaps = 14/384 (3%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDL 317 SIRV+ EK+++L+N + EL +T++ +Q + +L PV ++ + + R + +L Sbjct: 490 SIRVSEEKINRLMNAIAELAVTKNAFSQIARKLMMEHNLPVISREVKDAGQWVSRISAEL 549 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 ++++M++RM + VF ++PR++RD+A + GK++ L + G TELDK++I++I DPL HL Sbjct: 550 EDAIMAMRMTEVRTVFQKFPRVIRDIALQTGKRISLMMEGEDTELDKTIIDQIGDPLMHL 609 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN+ DHGIE +R+A GK+ G + L A +G + IE+ DDG GLN + + KA + Sbjct: 610 VRNAADHGIEPEAERIAKGKDPQGRVWLRAYSRGKYVFIEIEDDGKGLNPQALKEKAVEK 669 Query: 438 GLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 G +E+M++ + LIF PGFSTA+ V+++SGRGVGMDVV+ NI + G + I S+ Sbjct: 670 GFITAAQAEDMNETQAYQLIFLPGFSTAKAVSEISGRGVGMDVVRNNITALRGTISISSQ 729 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PREADLHPLAGGERVLE 553 G GT + + LPLTL + G+ V VA ++ ILPL+ V+E+L+ P E L + G ++L Sbjct: 730 LGKGTKLVMQLPLTLVVSRGLMVEVASQMLILPLDNVLETLKVPGERLL--MYRGRKLLH 787 Query: 554 VRGEYLPIVELWKVFNVAGAK-TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 RGE L +V L +V + + TE T VVI+ G + L+V++LIG+ V+VK L Sbjct: 788 HRGEVLGVVSLAEVIGMGQEELTERTP--VVIVTDGHMKVGLIVNRLIGEQDVLVKPLPD 845 Query: 613 NYRKVPGISAATILGDGSVALIVD 636 +PG+ TI+GDG VAL+++ Sbjct: 846 YLSSLPGMGGGTIMGDGRVALVMN 869 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 57/110 (51%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S D + Q F +EA E L +E+ LL L+ LN IFR H++KG A FGF+ Sbjct: 5 FSADDVEMLQAFIEEAGEYLQRVEEELLKLEVSDGTPGVLNDIFRQIHTLKGLASFFGFA 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE 110 + +H E +LD R +QLN+ I+ L L D + E + ++S E Sbjct: 65 EITRLSHQAEYVLDALRSDRIQLNSSIVELLLNAGDALGEMIRLLQESCE 114 >UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHS1_BDEBA Length = 671 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 150/405 (37%), Positives = 246/405 (60%), Gaps = 27/405 (6%) Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 N +++I+V +VD +++ VGELV+ ++ L + VN L + QL + R+L Sbjct: 259 NATSAIKVDTGRVDSVLDAVGELVVLKNQLVHDETVRSGVNL-RLEAIVDQLDKAVRELY 317 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 E +SIRM P++ +F + R+VRD++ L K V+L L+G TE+++++ E + DPL HLV Sbjct: 318 EKTLSIRMTPLKSMFIKIQRIVRDVSLTLDKPVDLQLIGEETEVERTVFELLGDPLVHLV 377 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RNS+DHG+E E R GK + + +SA+ GGN+ I+++DDG G+NR+++L KA +G Sbjct: 378 RNSMDHGVEKKELRQERGKPATAKVTVSAKQSGGNVIIDISDDGGGINRDKVLGKAIEKG 437 Query: 439 LTVS----ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 + ++ D++V IF PGFSTA++++D+SGRGVG+DVVK N+ K+ G + I SK Sbjct: 438 FVPAGVDPASIPDEQVFQYIFYPGFSTADKISDLSGRGVGLDVVKSNLDKINGKINIYSK 497 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G GTT R+ +PL+ AI DG+ V + +ILP++++ E ++ D ++G +V + Sbjct: 498 AGQGTTFRLTIPLSTAITDGIIVALDGARYILPIHSIREIVRVLPKDYTNISGAGKVASI 557 Query: 555 RGEYLPIVELWKVF-------------------NVAGAKTEATQGIVVILQSGGRRYALL 595 RG LP++++ K N A+ E T ++VI++S + A Sbjct: 558 RGHLLPVIDVSKTLGSINWSLNKKDQQLAQRRENSLSARREET--MLVIIESMTGQMAFP 615 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VD ++GQ QVVVK + + + +P ++ A ILGDG LI++ AL Sbjct: 616 VDDVLGQAQVVVKPITTG-QDIPEVAGAAILGDGRTVLILEPGAL 659 >UniRef50_A3ZQH0 Chemotaxis protein CheA n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQH0_9PLAN Length = 1014 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 154/372 (41%), Positives = 224/372 (60%), Gaps = 20/372 (5%) Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 RS+EL H QL+R + +Q+ VM RM+P+ +F R+ R+VRD++ GK+ Sbjct: 652 RSNELHEAVH--------QLERVSDGIQKCVMDTRMVPIGPLFGRFKRVVRDVSRTNGKE 703 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 + L + G TELDK +I+ + DPL H+VRNS DHGIE PE R+A GK+ G + L A H+ Sbjct: 704 IRLDISGEKTELDKRMIDELGDPLIHMVRNSADHGIESPEVRVANGKSPQGTIKLDAFHR 763 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTD 467 G +I I+VTDDG GL+ IL KA +G+ ++ MS+ ++ LI+ PGFSTAE++T+ Sbjct: 764 GNSIIIQVTDDGKGLDPTLILRKAIDRGIVDPAEADKMSNQQIFQLIWEPGFSTAEKITE 823 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRG+GMD+V+ I+ + G VE+ S G G T I LPLT+AIL + R+ E F LP Sbjct: 824 ISGRGMGMDIVRSKIENVNGVVEVDSTPGKGATFTIKLPLTMAILPSLMTRINGETFALP 883 Query: 528 LNAVMESLQ-PREADLHPLAGGERVLEVRGEYLPIVELWKVFN----VAGAKTEATQGIV 582 + ++ E ++ PRE G +RG + +V L ++F+ A +AT + Sbjct: 884 IESISEIVRVPREE--FGTVQGVLTASIRGRVVSVVRLEQLFDGVRPPATDTIDATDATI 941 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL-- 640 V++ GR L VD L+G+ +VVK++ NY V G+S A I GDG VALI+D SA+ Sbjct: 942 VVIGQEGRELGLAVDDLLGEEDIVVKSMAENYENVVGLSGACIRGDGRVALILDPSAMID 1001 Query: 641 QAINREQRMANT 652 A R M T Sbjct: 1002 AASQRRNSMVGT 1013 Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 15/127 (11%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAP----------DAEQLNAIFRAAHSIKGGAGT 56 + F DE+ +L+ + +LL L A DA+ +N +FR+AHS+KG + Sbjct: 12 NLLSDFLDESSQLIDRLNDNLLELDEWAKLAAEDGGAILDADLVNDMFRSAHSVKGLSAM 71 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 G + TH +EN+ D ARR E+++ + ++ + + D++ L +++ AS Sbjct: 72 LGLPSINCLTHNVENIFDAARRNELKVTSHVVEIVFNSVDLLSAMLHELREN-----ASD 126 Query: 117 DYICQAL 123 D C+ + Sbjct: 127 DVPCEEM 133 >UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46DT7_METBF Length = 598 Score = 266 bits (681), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 134/380 (35%), Positives = 240/380 (63%), Gaps = 9/380 (2%) Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 R++ +++D+L+NLVGELVI +S + + + +L +L ++ + R+LQE V+ Sbjct: 223 RISTKQLDKLMNLVGELVINRSRINELTRDL---KSKELEAALSDFHKLTRELQEEVIEA 279 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P++++ YPR++RDLA K+++ + G +LD++++E I D L HL+RN++DH Sbjct: 280 RMVPLDHITYIYPRMIRDLARVQNKKIDFIIKGKEIKLDRTILEEIGDSLVHLLRNAVDH 339 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT---V 441 GIE+PEKR+ K G ++++A Q + I + DDG G++ I A +G+ Sbjct: 340 GIEIPEKRVELRKKENGTVLITASRQENFVLIRIEDDGCGIDTNEIRKVALKKGIISRES 399 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 +E + ++E LIF PG ST++ VTD+SGRG+GMDVVK ++++GG V+++SK G G++ Sbjct: 400 AEQLQEEEAMQLIFTPGLSTSDNVTDISGRGIGMDVVKNRVERLGGSVKVESKPGLGSSF 459 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 + LPLT+A+ M +RV E + +P +++++++ ++ + G E +L + + LP+ Sbjct: 460 ELKLPLTVAVYQAMLLRVGKEKYAIPFTSIVKNIEVSSQEIKHIKGQEVIL-IDNKILPL 518 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN-YRKVPGI 620 L + F + E VV+++ G+ ++VD+L+G+ +V+VK+ +S G Sbjct: 519 FRLKRQFQLPDDDDE-NNIFVVLVEKHGQYTGIIVDELLGKQEVIVKSFKSKLLDDTRGF 577 Query: 621 SAATILGDGSVALIVDVSAL 640 + ATILGDGS+ LI+DV++L Sbjct: 578 AGATILGDGSIILIIDVNSL 597 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 60/97 (61%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + ++ LLVL+ + + EQ+N +FRAAH+ KG A T GF + Sbjct: 1 MDMSKYMDIFRVESEKYIKELSDSLLVLENDPENTEQVNTLFRAAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQ 99 E TH ME+L+D R + LN+ +I++ L D ++ Sbjct: 61 VELTHEMESLIDGLRTRQTVLNSSLIDVLLICVDTLE 97 >UniRef50_D2RYF1 CheA signal transduction histidine kinase n=1 Tax=Haloterrigena turkmenica DSM 5511 RepID=D2RYF1_9EURY Length = 1286 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 157/394 (39%), Positives = 233/394 (59%), Gaps = 23/394 (5%) Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 +++E S+RV +E++D L+ LV LV ++ L ++E + + L + L+ D Sbjct: 906 QTDEIQSVRVDIEQIDSLLTLVEGLVTSRVRLRHTATESEATDA--LEAELDDLEDLTTD 963 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE+VM IR++P++ V +R PR+VRD+A K+V + G ELD+S+++RI DPL H Sbjct: 964 LQETVMDIRLVPLQTVANRLPRVVRDIARDQDKEVTFEITGEDVELDRSILDRIGDPLIH 1023 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRN++DHGIE PE+R AA K G++ + A+ + I V DDG GL+ +R+ +A Sbjct: 1024 LVRNAVDHGIEPPEEREAADKPREGSVEVHADRSRDRVQITVEDDGNGLDPDRLRDEAVE 1083 Query: 437 QGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 G+ ++ +SDDE LIF PG STA++VTDVSGRGVGMDVVKR I+ + G V I S Sbjct: 1084 AGVHTADEVAELSDDEAYDLIFHPGLSTADEVTDVSGRGVGMDVVKRTIEDLDGTVSIDS 1143 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA-----GG 548 + G GTT+ + LP+++AI D + + E F +P AV D+ P A G Sbjct: 1144 EAGEGTTVTMTLPVSVAIDDILFIESGGEEFGVPTKAVQ--------DIEPAATLETVDG 1195 Query: 549 ERVLEVRGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 +RVL + ++EL V AGA + G+VV ++ R A+ D + GQ +VV Sbjct: 1196 QRVLTDGDDTYSVIELDDVLETPRAGANGD---GMVVRIRDDVRSVAIHCDHVYGQQEVV 1252 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VK E +PG+S AT+ G G V I+DV+ L Sbjct: 1253 VKPFEGFMSDIPGLSGATVRGRGEVVNILDVTTL 1286 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/169 (26%), Positives = 83/169 (49%), Gaps = 10/169 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++D+ F E++E + ++ LL L+ + D E + IFR AH++KG G G + Sbjct: 1 MTDYLTDFVQESEERITELNNALLTLERDPTDDEAMENIFRVAHTLKGNCGAMGLEPASD 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+LLD R+G +++ +++++ + D ++ +D E + I ALR Sbjct: 61 LAHAIEDLLDAVRQGGLEVTPELMDVVFDAVDELETMIDEVAADGEIETDPSATIA-ALR 119 Query: 125 QLALEAKGETPSAVT-----RLSVVAK--SEPQDEQSRSQSPRRIILSR 166 + + G P+A+T + V K P D++ R+ R +I R Sbjct: 120 EQLEDGGG--PAAITTPSTDEIDAVTKRFDPPADDEHRAYLVRLVIADR 166 >UniRef50_B8DJY0 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DJY0_DESVM Length = 794 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 154/381 (40%), Positives = 233/381 (61%), Gaps = 9/381 (2%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 +TS+RV KVD+L++ VGELVI Q+ L++ +++ D +L + +L + RD S Sbjct: 412 TTSLRVDSAKVDRLLDNVGELVILQARLSRIATDHDDPRLRELAEGLERLTESLRD---S 468 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 MS+RM+P++ F + RLVRDLA +LGK V G TELDK++I+ + DPL HLVRN Sbjct: 469 TMSVRMVPLDATFHAFRRLVRDLAARLGKDVRFVAEGGETELDKTVIDHLRDPLLHLVRN 528 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHG+E + RLAAGK + L LSA H GG + I V+DDGAG++ +++ A ++GL Sbjct: 529 AMDHGVEPADVRLAAGKPAEAVLRLSAAHAGGEVLITVSDDGAGIDLDKLRAVGVARGLL 588 Query: 441 VSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 + + + E+ L+F PGFSTA V+D+SGRGVG+DVV + + G V++ ++QG GT Sbjct: 589 APDADPGEAELLQLLFLPGFSTASGVSDLSGRGVGLDVVSTALGSLRGSVDVVTRQGEGT 648 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 R+ +PLTLAI+DG+ VRV DE FILPL V L+ R D G ++E R + Sbjct: 649 AWRLRIPLTLAIIDGLRVRVGDEAFILPLTQVQACLE-RFVDGEAATLG--LIEYRERLV 705 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P + L + V G + + V+I G+ VD + G Q V+K L R+ Sbjct: 706 PCLSLRRFLEVPGEQPAYER--VIIANVDGQPVGFAVDGVAGLEQAVIKRLGGPCRRAAW 763 Query: 620 ISAATILGDGSVALIVDVSAL 640 I+ +++ +G ++LI+D + L Sbjct: 764 IAGSSVDAEGGISLILDAAQL 784 Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 40/68 (58%) Query: 36 DAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETK 95 DA + +FRA H++KG FGF + TH +E+L D R+ + ++++ L L+ K Sbjct: 35 DAALMARVFRALHTLKGTGAMFGFDAVARFTHAVEDLFDSVRKAGVPATSELLALGLDAK 94 Query: 96 DIMQEQLD 103 D +QE L+ Sbjct: 95 DHLQELLE 102 >UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGC3_PLALI Length = 910 Score = 265 bits (677), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 166/393 (42%), Positives = 236/393 (60%), Gaps = 23/393 (5%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELD------PVNHGDLITSMGQLQRNARD 316 SIRV VE +D+L+NLVGELV+T++ L Q D PV H L R D Sbjct: 233 SIRVNVEVLDKLMNLVGELVLTRNQLLQMVRGEDESRFQVPVTH---------LNRVTTD 283 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE VM RM P+ +S+ PRLVRDL+ KQ+EL + G+ TELD+++++ I DPLTH Sbjct: 284 LQEGVMKTRMQPIGNAWSKLPRLVRDLSQVTSKQIELEMHGAETELDRTVLDAIKDPLTH 343 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 +VRNS DHGIE E R GK+ G + L A H+GG++ I V DDGAG++ ER+ K Sbjct: 344 MVRNSADHGIEKAEIRRKQGKSESGTIRLKAFHEGGHVIIHVEDDGAGIHVERVRQKVLE 403 Query: 437 QGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +GL + +S++E+ IF PGFSTAE VT VSGRGVGMDVV+ I+++GG VE++S Sbjct: 404 KGLATESDLAHLSEEEILQFIFLPGFSTAETVTSVSGRGVGMDVVRTAIERIGGTVELRS 463 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG--GERV 551 + G GTTIRI +PLTLAI+ + V + + F +P ++E ++ DL + +R+ Sbjct: 464 QWGQGTTIRIKIPLTLAIISALVVSSSGQSFAIPQLGIVELVRLSVDDLIRIEKIHDQRI 523 Query: 552 LEVRGEYLPIVELWKVFNVAG--AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 +R LP++ L + E IVV+ Q G ++ L+VD++ ++VVK Sbjct: 524 FRLRDRLLPLLRLSDALKLPSLPPDNEGDMSIVVV-QVGDEQFGLIVDEVFDTQEIVVKP 582 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L S + + TILGDG V +I+DV+ A Sbjct: 583 LGSILKDLRVYQGTTILGDGRVIMILDVAGTAA 615 >UniRef50_B5W7Y8 CheA signal transduction histidine kinase n=2 Tax=Arthrospira RepID=B5W7Y8_SPIMA Length = 744 Score = 263 bits (672), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 153/392 (39%), Positives = 236/392 (60%), Gaps = 13/392 (3%) Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ----LQRNARD 316 S +RV + K+D+L+ +VGELVIT++ L + L P ++ + L+R RD Sbjct: 335 SNLVRVDLPKLDELMRMVGELVITRARLEENLKNLPPTVPAARRRTLQEINLTLERQLRD 394 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 L++ VM +R++P+ +F+R +VRDL GKQV L + G+ TE+DK ++ER++DPL H Sbjct: 395 LRQGVMQVRLVPIAEIFARMQFVVRDLMRLTGKQVALEISGAETEIDKFVVERMMDPLLH 454 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRN++ HGIE E+RL AGK++ G + L A G + IE+ DDG G++ R+L +A Sbjct: 455 LVRNAVSHGIESTEERLKAGKSATGAIALRASAAGEMVIIEIEDDGQGVDISRVLKRAKQ 514 Query: 437 QGL---TVSE-----NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 QGL +VSE N + L+ +PGFST E+ SGRGVGM +VK +Q++GG Sbjct: 515 QGLLSDSVSETNDPDNYDSQTILDLLCSPGFSTKEEADLASGRGVGMAIVKNTVQELGGC 574 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 V+ +++G G+ I LPLTLAI D + V V+ + F +P +++ E L + L G Sbjct: 575 VKFTTQKGKGSHFIIDLPLTLAITDALIVEVSGQTFAIPESSIQEVLSIENERIICLEGQ 634 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 E ++ RG P+ L ++FN A + + VV++ + L+V++++G ++VV+ Sbjct: 635 E-IISYRGHVFPLRYLARLFNCAVTTDNSEKLTVVVIGNSLNSTGLVVNRILGLREIVVR 693 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L + PGIS AT LGDG V LI+DV AL Sbjct: 694 PLTDPLLQSPGISGATELGDGRVVLIMDVPAL 725 Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 9/140 (6%) Query: 15 EADELLADMEQHLLVL-----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 E +E LA + + LL L QP+ + LN +FR+ HSIKG + G ++ H M Sbjct: 21 ECEEHLAVVRRELLALESCMNQPQI-EGSILNELFRSFHSIKGLSAMVGVREAEKLAHQM 79 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 E+ L R G+ L + + + I++ ++AY+ ++P + I L Sbjct: 80 ESYLRSLRDGQTSLKPEGFDALMSGTQILERAIEAYRTKEDP--PDIEEIISQLEACNPP 137 Query: 130 AKGETP-SAVTRLSVVAKSE 148 +TP +A+T V K E Sbjct: 138 VVAKTPNAAITPFEVKLKPE 157 >UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZV35_9SPHI Length = 671 Score = 263 bits (671), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 202/669 (30%), Positives = 351/669 (52%), Gaps = 39/669 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S F + F E+ ++L D+E L+ L+ + + E LN IFR H+IKGGA G L Sbjct: 1 MSQFSEKFIQESQDMLTDLESDLIELEKDLSNEEYLNNIFRYLHTIKGGALMIGLDHLGS 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E + R G +++ I++L + D +++ L + + + L+ Sbjct: 61 FIHEIEAIFALLRDGAKKIDDQILSLSFQAVDHIKKVLKDPNLTDHFLKENQQNLIAVLK 120 Query: 125 QLALEAKGETPSAVTRLSVVA--KSEPQDE-QSRSQSPRRIILSRLKAGEVDLL------ 175 QL + + + V +++ V +P ++ ++ P ++ LK+ + Sbjct: 121 QLQNQDQN-LENIVPKMNYVYGMTIKPISPLKTDTEHPIIFVIKELKSTYENYFLKRIAH 179 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLC-------FVIEADQITFETVEV 228 EEE+ + D V D L A+ EDD + F + T ++ Sbjct: 180 EEEILFWFIIVDQVSEKDELEALFL--FVEDDFEISIQELGSSEDFHLSEQMKTKLNEQI 237 Query: 229 SPKISTP------PVLKLAAEQAPTGRVE---REKTT-----RSNEST-SIRVAVEKVDQ 273 K P + +EQ + E ++ +T ++NE T S R++ KV++ Sbjct: 238 QDKKELPSLEDTKKIFANLSEQVSKNKPEVASQDNSTAINENKANERTGSTRISKYKVNR 297 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 LIN V EL+ S L +S +N +LIT +L+ N L+E V S+ + P+ + Sbjct: 298 LINAVSELMTLNSSLKNIAST-HSLNDLNLITEKIELEINH--LREDVFSLNLRPLSTLN 354 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 +++ R+VR+L+ + GK+VE +VG TELDK +IE + +PL H++RNS+DHGIE E+RL Sbjct: 355 TQFKRMVRNLSKQQGKKVEFEMVGGDTELDKHMIESLENPLLHILRNSIDHGIEPSEERL 414 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAM 452 K G + LS + G ++ IE+ DDG G+N +++ AKA +G+ SE MSD+E+ Sbjct: 415 KKEKKETGLITLSGYYTGTDVIIEIKDDGRGINADKVRAKAIERGIIEQSEVMSDEELYH 474 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 LI PGFSTA+++T++SGRGVGMDVVK+NI + G++ I S GT I LPLTL+I+ Sbjct: 475 LICYPGFSTADELTELSGRGVGMDVVKKNIDSLKGNLHISSTPQKGTHFTIRLPLTLSII 534 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 DG+ V V + +I+P+ ++ + + + +++V G+ + ++ L K F Sbjct: 535 DGLLVDVENVKYIVPMFSIDQIYRLPTKSIEREDYFSFLVQVDGQQISVLNLRKEFQFNQ 594 Query: 573 AKT-EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSV 631 + + + V++L + + + VD++ G+ Q ++K + ++ I ++ILGDGS+ Sbjct: 595 QENIDIKEMDVIMLSNNEKSQGIAVDKIYGEIQAIIKPIGKHFSTQKYILGSSILGDGSL 654 Query: 632 ALIVDVSAL 640 AL++D L Sbjct: 655 ALVLDTHRL 663 >UniRef50_A5F8D5 Chemotaxis protein CheA n=25 Tax=Vibrio RepID=A5F8D5_VIBC3 Length = 761 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 150/395 (37%), Positives = 235/395 (59%), Gaps = 10/395 (2%) Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVNH--GDLIT 305 E+ + + +++V EKVD L++LVGEL++ ++ LA R+ V D+ Sbjct: 359 EQLDKVKKKQIKTLKVDQEKVDLLMDLVGELIVAKNSMQYLAYRAENEFGVRKLAQDIKA 418 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + R A DLQ VM +RM+P+ VF RYPRL+RD++ KLGKQV+L + G TE DKS Sbjct: 419 EQSVISRLAEDLQSVVMQVRMVPLATVFQRYPRLIRDISRKLGKQVDLIIEGEDTEADKS 478 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E + +PL HL+RN+LDHGIE P+ R GKN G + LSA ++ I+++DDG G+ Sbjct: 479 IVEDLSEPLVHLIRNALDHGIESPDIRREQGKNPTGKITLSAFTLDDSVIIKMSDDGKGV 538 Query: 426 NRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + ER+ KA +GL + E MS E+ LIF PGFST EQV+D+SGRGVGMD V+ I Sbjct: 539 DVERVKTKALERGLVEASKLERMSQQEIIHLIFEPGFSTVEQVSDLSGRGVGMDAVRTAI 598 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ-PREAD 541 ++ GG + + S+ G G+ I ++LPL++ I M + + F +P+ +V+++L+ R D Sbjct: 599 ERNGGTLTLSSEPGKGSEITMILPLSMTISRVMMFELEQQSFAIPIESVIQTLKISRHKD 658 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + + + + +RGE +PI+ L + F + A+ +++++ G L VD+L Sbjct: 659 IRRVKNLDTFI-LRGETVPILYLKRAFEMNSAQIYPDIQPILVVRVGDDVLGLAVDRLQE 717 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 V++K LE A I+GDG V L++D Sbjct: 718 GQDVIIKPLEGALATFSIYRGAAIMGDGRVLLVLD 752 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 1/119 (0%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF-GFSVLQETTHL 68 Q F E+ +L+ + LL L+ D +N +FR H++KG +G + + H Sbjct: 6 QNFIIESRDLIESAARGLLALEANPDDKAIINELFREIHTVKGASGILDNIAPFTQLAHR 65 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 ME+L+ + R G + LN +++L L D ++ +Q QE A + Q + QLA Sbjct: 66 MEDLMQKVRDGHVALNGTMLDLMLGCCDQFLLWIEELEQHQELSAEAVSISKQMIAQLA 124 >UniRef50_C1SIR9 Chemotaxis protein histidine kinase-like protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SIR9_9BACT Length = 969 Score = 259 bits (662), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 147/419 (35%), Positives = 249/419 (59%), Gaps = 21/419 (5%) Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 + P + E +P V +EK S S++V EK+D+ N +GELV+ ++ Sbjct: 560 TAPAAVVAEPEPSPEPVVAKEKF-----SQSMKVDQEKIDKFTNTIGELVVAKNAYEYMM 614 Query: 293 SELDPVNHGDLITSMGQ--------LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 +L + DL TS+ + + R ++DLQ ++S+RM+P++ +F+++PR+VRD++ Sbjct: 615 QKL--IKDYDLPTSLVKDFKDNSNLIARISQDLQRDILSLRMVPIKQIFNKFPRVVRDIS 672 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 K K ++L ++G TE+DK + + + DPL HLVRN+ DHG+E +R A+GK G+LI Sbjct: 673 RKQNKTMDLRIIGEDTEIDKKIADILSDPLVHLVRNACDHGLESAAERTASGKYETGSLI 732 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAE 463 L A ++G + IEV DDG G+N ++L KA S+GL N+++ E+ I APGFSTAE Sbjct: 733 LKAYNEGSFVYIEVIDDGRGINCGKVLEKAVSKGLVPDGANLTEKEIIQFILAPGFSTAE 792 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA-DE 522 +VTD+SGRGVGMDVVK +I +GG +++ S +G GT + + +P+T+ + + V++ DE Sbjct: 793 KVTDISGRGVGMDVVKSSITSVGGFIDVSSSEGEGTRVTMKIPVTIGMSTSLLVQMGEDE 852 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI- 581 + P+ V E++ + + L G+ RG LP+ +L K+ + G E + + Sbjct: 853 FYAFPIENVAETIIIEKEQVKDLHFGKGTY-YRGNVLPLFQLSKL--LGGENKELSDEVS 909 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 VVI + + ++VD+L+ + + +K + + + I TILGDG L+++V+ L Sbjct: 910 VVITVTDAGKTGIIVDELLNRMDIAIKPVPEYFSHLNYIGGVTILGDGQAVLVLNVNKL 968 Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 8/167 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +DI F F DEA +LL + +++L + D E NA+FR H+IKG AG FGF + Sbjct: 4 IDIEKFKLGFLDEAADLLEEANENILRAE-SGGDLELFNAVFRCIHTIKGSAGGFGFDGI 62 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD------AASF 116 E +H +E +LD+ R GE+++N DI +L L+ D + E +D + +E + A F Sbjct: 63 SEFSHHLETMLDKLRTGELKINADITDLLLKGIDTLFEMVDYARDRKEYNKDLSGITAQF 122 Query: 117 DYICQALRQLALEAKGET-PSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 + A+EA + P AV ++ K E P R+ Sbjct: 123 ESRADDGMICAVEADADRLPEAVVKVDTAIKKELISRHPGFGKPYRV 169 Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 4/73 (5%) Query: 38 EQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTD----IINLFLE 93 E ++ IFR H+IKG +G GFS +++ HL+EN+LD+ R G + + I+N+ + Sbjct: 317 EAVDNIFRVFHNIKGDSGYVGFSFMEKYAHLVENMLDKVREGSVVFDNRAAEFILNIISD 376 Query: 94 TKDIMQEQLDAYK 106 K ++ L+ K Sbjct: 377 VKAVINALLNKEK 389 >UniRef50_Q1D353 Chemotaxis protein CheA n=2 Tax=Cystobacterineae RepID=Q1D353_MYXXD Length = 862 Score = 259 bits (661), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 154/394 (39%), Positives = 242/394 (61%), Gaps = 24/394 (6%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSE---------LDPVNHGDLITSMGQLQRN 313 ++RV + ++D LIN+VGEL++ ++ L QR +E L + +L L+R Sbjct: 465 TVRVDIGRLDGLINMVGELLLIKANL-QRLAESARQDGAVALSKLFGQELARETRGLERK 523 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 LQE ++ RM+P+ VF + RLVR + + GK++EL + G ELDK ++E + DP Sbjct: 524 LEALQEGLLEARMVPVGQVFDKLARLVRRITREAGKEIELAISGGEVELDKLIVEELSDP 583 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HL+RN++DHG+E P+ RLAAGK + L AE +G ++ IEV+DDG+G++ R+ Sbjct: 584 LMHLIRNAIDHGVESPDARLAAGKPRRAVVGLRAEQKGNHVVIEVSDDGSGIDEVRVREV 643 Query: 434 AASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 A ++GL ++ MS E+ LIF PGFSTA V+++SGRGVG+DVVK N+ + G ++ Sbjct: 644 AITRGLITFAQAQEMSRRELLNLIFQPGFSTARSVSELSGRGVGLDVVKNNLGNLSGIID 703 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME--SLQPREADLHPLAGG 548 + S++G GT + LP+TLAI+ + V V+ + +PLN+V+E S+QP+E + Sbjct: 704 VWSERGKGTAFHLTLPVTLAIIRALLVGVSGRTYAVPLNSVLEIISVQPKE-----IRTV 758 Query: 549 ER--VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 ER VL++RG+ LP V L ++F + + ++ VV++ R + VD+L GQ +V Sbjct: 759 ERREVLDLRGQTLPFVRLSRMFAL--PERPVSRHFVVVVGLAQERLGIAVDELHGQQDIV 816 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 K L + V GIS AT LG+ L++DV+AL Sbjct: 817 TKPLGGRLQSVRGISGATELGNRRTVLVLDVAAL 850 Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 66/230 (28%), Positives = 107/230 (46%), Gaps = 22/230 (9%) Query: 12 FFDEADELLADMEQHLLVL---QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 F EA E+L + + LLVL + D + +N IFRAAHS+KG +G FG + H Sbjct: 11 FVAEATEILDALARDLLVLDERRGSEADPDLVNGIFRAAHSLKGLSGLFGQERISRLAHG 70 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL 128 E+LLD R G++ L+ +++ +E D Q L + E ++ S A R ++ Sbjct: 71 TEDLLDRLRLGKLLLDGAVLDALIEALDAFQALLGEAARGAESESLSARVEAMAARMASM 130 Query: 129 EAKGETPS--AVTRLSVVAK-----SEPQDEQSRSQSPRRIILSRLKAGEVDL------L 175 A E + + RL + A+ +E ++ + R R + L R++A DL L Sbjct: 131 GAPAEVAADDPLDRLELEAQVRSVFTEYEEHRLRENVRRGVSLWRVRAA-FDLSDFDKGL 189 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 E L L +V+ +L + PG I L F + D+++ ET Sbjct: 190 AELNARLKPLGEVIS---TLPSAQPG--GAHGIAFDLIFGAQVDRVSLET 234 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria... 790 0.0 UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae Re... 718 0.0 UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providenc... 699 0.0 UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n... 694 0.0 UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae Re... 673 0.0 UniRef50_B2UHV0 CheA signal transduction histidine kinase n=22 T... 673 0.0 UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 T... 667 0.0 UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 658 0.0 UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Ta... 658 0.0 UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Ta... 658 0.0 UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related ... 656 0.0 UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blanden... 654 0.0 UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadacea... 650 0.0 UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3... 649 0.0 UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 T... 644 0.0 UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Ta... 644 0.0 UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Ta... 643 0.0 UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Ta... 643 0.0 UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9Q... 643 0.0 UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteoba... 642 0.0 UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Ta... 641 0.0 UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Ta... 636 0.0 UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH7... 636 e-180 UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 T... 635 e-180 UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor ... 631 e-179 UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=... 631 e-179 UniRef50_Q0AYL2 Putative CheA signal transduction histidine kina... 629 e-179 UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 T... 628 e-178 UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 T... 627 e-178 UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Mori... 626 e-178 UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pse... 625 e-177 UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium R... 625 e-177 UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepI... 624 e-177 UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae R... 621 e-176 UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Ta... 620 e-176 UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Ta... 620 e-176 UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Ta... 618 e-175 UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Ta... 616 e-175 UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 T... 615 e-174 UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Ta... 612 e-174 UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Ta... 612 e-173 UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 612 e-173 UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobact... 611 e-173 UniRef50_A3EPP7 Putative signal transduction histidine kinase (C... 611 e-173 UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Ta... 611 e-173 UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1H... 610 e-173 UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-lik... 609 e-172 UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Ta... 607 e-172 UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Ta... 606 e-172 UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured m... 606 e-171 UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 ... 604 e-171 UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae R... 604 e-171 UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=C... 603 e-171 UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Ta... 603 e-171 UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Ta... 599 e-170 UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-lik... 598 e-169 UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein... 597 e-169 UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V49... 596 e-168 UniRef50_C6HWL4 Putative signal transduction histidine kinase (C... 596 e-168 UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-lik... 594 e-168 UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Ta... 594 e-168 UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelo... 594 e-168 UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Ta... 593 e-168 UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-lik... 593 e-168 UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Ta... 592 e-167 UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 592 e-167 UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Ta... 591 e-167 UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Ta... 591 e-167 UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HS... 590 e-167 UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Ta... 588 e-166 UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Ta... 587 e-166 UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Ta... 587 e-166 UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Ta... 587 e-166 UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Ta... 587 e-166 UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Ta... 586 e-166 UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepI... 586 e-165 UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Ta... 586 e-165 UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobact... 584 e-165 UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnik... 584 e-165 UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepI... 583 e-165 UniRef50_Q6AJV5 Related to two-component system sensory/regulato... 583 e-165 UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Ta... 582 e-164 UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzl... 582 e-164 UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Ta... 582 e-164 UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax... 581 e-164 UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria R... 581 e-164 UniRef50_Q67P71 Two-component sensor histidine kinase involved i... 580 e-164 UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 T... 579 e-163 UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Ta... 579 e-163 UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae... 577 e-163 UniRef50_C8S642 CheA signal transduction histidine kinase n=1 Ta... 577 e-163 UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 T... 577 e-163 UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditroph... 575 e-162 UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 T... 575 e-162 UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Ta... 574 e-162 UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax... 574 e-162 UniRef50_Q04U49 Chemotaxis protein histidine kinase n=5 Tax=Lept... 572 e-161 UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-lik... 572 e-161 UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 572 e-161 UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepI... 572 e-161 UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK... 572 e-161 UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK... 570 e-161 UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 ... 569 e-161 UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerot... 568 e-160 UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 T... 568 e-160 UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Ta... 568 e-160 UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Ta... 566 e-159 UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein... 566 e-159 UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Ta... 566 e-159 UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira inter... 565 e-159 UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis A... 563 e-159 UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Ta... 562 e-158 UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-lik... 562 e-158 UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 T... 562 e-158 UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobia... 561 e-158 UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=... 560 e-158 UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 T... 560 e-158 UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW... 560 e-158 UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Ta... 558 e-157 UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 557 e-157 UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=... 555 e-156 UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Ta... 555 e-156 UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acet... 555 e-156 UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Ta... 555 e-156 UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 T... 555 e-156 UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 T... 553 e-156 UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax... 553 e-156 UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Ta... 553 e-155 UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Ta... 552 e-155 UniRef50_C2BUM1 Sensor histidine kinase CheA n=1 Tax=Mobiluncus ... 552 e-155 UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Ta... 552 e-155 UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Metha... 550 e-155 UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales ... 549 e-154 UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Ta... 549 e-154 UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related ... 549 e-154 UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 T... 549 e-154 UniRef50_B4SHY6 CheA signal transduction histidine kinase n=14 T... 549 e-154 UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 549 e-154 UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Lept... 549 e-154 UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Ta... 548 e-154 UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 R... 547 e-154 UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Ta... 546 e-154 UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Ta... 545 e-153 UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Ta... 545 e-153 UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Ta... 545 e-153 UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-lik... 544 e-153 UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 544 e-153 UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 T... 544 e-153 UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter ox... 544 e-153 UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alp... 543 e-153 UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Ta... 543 e-153 UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Ta... 543 e-152 UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Ta... 542 e-152 UniRef50_UPI00016C4BDB putative CheA signal transduction histidi... 542 e-152 UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Ta... 541 e-152 UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Ta... 540 e-152 UniRef50_B0R4J9 Taxis sensor histidine kinase cheA n=4 Tax=Halob... 538 e-151 UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Ta... 537 e-151 UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Ta... 537 e-151 UniRef50_C7I0R5 CheA signal transduction histidine kinase n=1 Ta... 537 e-151 UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Ta... 537 e-151 UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Ta... 537 e-151 UniRef50_D1TKM6 Putative CheA signal transduction histidine kina... 536 e-151 UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Ta... 535 e-150 UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Prot... 535 e-150 UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Ta... 534 e-150 UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia Re... 533 e-150 UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 532 e-149 UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Ta... 532 e-149 UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacte... 532 e-149 UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Ta... 531 e-149 UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio ma... 529 e-148 UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomo... 529 e-148 UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 T... 529 e-148 UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Ta... 528 e-148 UniRef50_B5W7Y8 CheA signal transduction histidine kinase n=2 Ta... 528 e-148 UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vu... 528 e-148 UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Ta... 527 e-148 UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Ocea... 527 e-148 UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 T... 527 e-148 UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostri... 526 e-147 UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis ME... 526 e-147 UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile... 525 e-147 UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Ta... 524 e-147 UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Ta... 523 e-147 UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related ... 523 e-146 UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Ta... 522 e-146 UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacter... 522 e-146 UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A... 521 e-146 UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribac... 520 e-146 UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Ta... 520 e-145 UniRef50_B1M893 CheA signal transduction histidine kinase n=11 T... 519 e-145 UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 T... 519 e-145 UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Ta... 519 e-145 UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Ta... 518 e-145 UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Ta... 518 e-145 UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 518 e-145 UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 517 e-145 UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacte... 516 e-144 UniRef50_D2LCX3 CheA signal transduction histidine kinase n=1 Ta... 515 e-144 UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase... 515 e-144 UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla mari... 515 e-144 UniRef50_C6NWJ7 Signal transduction histidine kinase CheA n=1 Ta... 514 e-144 UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Ta... 513 e-144 UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Ta... 512 e-143 UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Ta... 511 e-143 UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase ... 509 e-142 UniRef50_C7M283 CheA signal transduction histidine kinase n=1 Ta... 509 e-142 UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Lept... 508 e-142 UniRef50_C7RK06 CheA signal transduction histidine kinase n=1 Ta... 508 e-142 UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Ta... 507 e-142 UniRef50_B4X286 Hpt domain protein n=1 Tax=Alcanivorax sp. DG881... 507 e-142 UniRef50_A3J8A3 CheA Signal Transduction Histidine Kinases (STHK... 505 e-141 UniRef50_Q4ZZ60 Response regulator receiver:CheW-like protein:AT... 505 e-141 UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein... 504 e-141 UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermoc... 503 e-141 UniRef50_Q0KDN3 Type IV pilus protein histidine kinase/response ... 502 e-140 UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata o... 502 e-140 UniRef50_A0YJV3 Chemotaxis protein CheA n=1 Tax=Lyngbya sp. PCC ... 502 e-140 UniRef50_B4UFH8 CheA signal transduction histidine kinase n=3 Ta... 501 e-140 UniRef50_Q2SPH8 Chemotaxis protein histidine kinase and related ... 500 e-140 UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacterio... 500 e-140 UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Ta... 500 e-140 UniRef50_UPI00016C455D CheA signal transduction histidine kinase... 499 e-139 UniRef50_C6P319 CheA signal transduction histidine kinase n=1 Ta... 499 e-139 UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococ... 499 e-139 UniRef50_B8GP53 Putative CheA signal transduction histidine kina... 499 e-139 UniRef50_A4VRH0 Probable component of chemotactic signal transdu... 498 e-139 UniRef50_Q3BQK3 Two-component system sensor histidine kinase-res... 498 e-139 UniRef50_C5BLL4 Putative CheA signal transduction histidine kina... 497 e-139 UniRef50_Q46Y03 Response regulator receiver:CheW-like protein:AT... 496 e-138 UniRef50_A3ZQH0 Chemotaxis protein CheA n=1 Tax=Blastopirellula ... 496 e-138 UniRef50_C7R7A2 CheA signal transduction histidine kinase n=1 Ta... 496 e-138 UniRef50_C7I5C3 CheA signal transduction histidine kinase n=1 Ta... 495 e-138 UniRef50_Q4K4F2 Sensor histidine kinase/response regulator ChpA,... 495 e-138 UniRef50_A4BK22 Chemotaxis protein histidine kinase and related ... 495 e-138 UniRef50_B3R318 Response regulator receiver of TWO COMPONENT REG... 495 e-138 UniRef50_A5WHF4 CheA signal transduction histidine kinase n=1 Ta... 494 e-138 UniRef50_A8ZWJ2 CheA signal transduction histidine kinase n=2 Ta... 493 e-138 UniRef50_A1U772 CheA signal transduction histidine kinase n=2 Ta... 493 e-138 UniRef50_C0N3I1 Hpt domain protein n=1 Tax=Methylophaga thiooxid... 493 e-138 UniRef50_A8TEK5 CheA signal transduction histidine kinase n=1 Ta... 492 e-137 UniRef50_B3QWP5 CheA signal transduction histidine kinase n=1 Ta... 492 e-137 UniRef50_Q21EJ5 Response regulator receiver n=1 Tax=Saccharophag... 492 e-137 UniRef50_C1A888 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aur... 492 e-137 UniRef50_Q4UXG6 PilL protein n=7 Tax=Xanthomonas RepID=Q4UXG6_XANC8 491 e-137 UniRef50_A0Y9Q4 Sensor histidine kinase/response regulator n=1 T... 491 e-137 UniRef50_Q6LU38 Hypothetical chemotaxis histidine protein kinase... 491 e-137 UniRef50_C4XQQ6 Chemotaxis protein CheA n=2 Tax=Desulfovibrio Re... 490 e-137 UniRef50_D2UEX4 Probable two-component system sensor histidine k... 490 e-137 Sequences not found previously or not previously below threshold: >UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria RepID=CHEA_SALTY Length = 671 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 565/671 (84%), Positives = 596/671 (88%), Gaps = 17/671 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMDISDFYQTFFDEADELLADMEQHLL L PE+PDAEQLNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSMDISDFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK S+EPDAASF+YIC Sbjct: 61 ILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKNSEEPDAASFEYIC 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR-----RIILSRLKAGEVDLL 175 ALRQLALEAKGET AV + ++ + ++ + ++SPR RI+LSRLKA EVDLL Sbjct: 121 NALRQLALEAKGETTPAVVETAALSAAIQEESVAETESPRDESKLRIVLSRLKANEVDLL 180 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 EEELG+L TLTDVVKGADSLSA L G +AEDDI AVLCFVIEADQI FE V +P Sbjct: 181 EEELGNLATLTDVVKGADSLSATLDGSVAEDDIVAVLCFVIEADQIAFEKVVAAPVEKAQ 240 Query: 236 PVLKLAA------------EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 ++A A REK R ESTSIRVAVEKVDQLINLVGELVI Sbjct: 241 EKTEVAPVAPPAVVAPAAKSAAHEHHAGREKPARERESTSIRVAVEKVDQLINLVGELVI 300 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 TQSMLAQRS+ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR+PRLVRDL Sbjct: 301 TQSMLAQRSNELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRFPRLVRDL 360 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE+PEKRL AGKN VGNL Sbjct: 361 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEMPEKRLEAGKNVVGNL 420 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAE 463 ILSAEHQGGNICIEVTDDGAGLNRERILAKA SQG+ V+ENM+DDEV MLIFAPGFSTAE Sbjct: 421 ILSAEHQGGNICIEVTDDGAGLNRERILAKAMSQGMAVNENMTDDEVGMLIFAPGFSTAE 480 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 QVTDVSGRGVGMDVVKRNIQ+MGGHVEIQSKQG+GTTIRILLPLTLAILDGMSVRVA EV Sbjct: 481 QVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGSGTTIRILLPLTLAILDGMSVRVAGEV 540 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVV 583 FILPLNAVMESLQPRE DLHPLAGGERVLEVRGEYLP+VELWKVF+V GAKTEATQGIVV Sbjct: 541 FILPLNAVMESLQPREEDLHPLAGGERVLEVRGEYLPLVELWKVFDVDGAKTEATQGIVV 600 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 ILQS GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ + Sbjct: 601 ILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQGL 660 Query: 644 NREQRMANTAA 654 NREQRMA TAA Sbjct: 661 NREQRMAITAA 671 >UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae RepID=B4EYQ3_PROMH Length = 739 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 442/725 (60%), Positives = 516/725 (71%), Gaps = 80/725 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELLADMEQHLL+L P+ PD EQLNAIFR+AHSIKGGA TFGF L Sbjct: 1 MDITEFYQTFFDEADELLADMEQHLLLLDPQNPDQEQLNAIFRSAHSIKGGAATFGFVKL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+TTH++ENLLD ARR EM L DIINLFLE KDIMQ+QLDA+K SQEPD +F+YIC+ Sbjct: 61 QQTTHVLENLLDSARRHEMVLTDDIINLFLEAKDIMQQQLDAHKNSQEPDEETFNYICEK 120 Query: 123 LRQLALEAKGETPSAVTR-----------------LSVVAKSEPQDEQSRSQSP------ 159 LRQLALE K E + + V A DE S+ P Sbjct: 121 LRQLALEVKEEQSTQLGEGSDSVSLTESNAPTENITPVSAVHHTDDELSKENQPLATANT 180 Query: 160 --------RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV 211 IILS LK ++DL+ +EL HL ++ V K L A+L ++DI+AV Sbjct: 181 PNTDGLYQHHIILSDLKETDIDLMLDELKHLGEVSQVEKQHHGLEAVLKTTATQEDISAV 240 Query: 212 LCFVIEADQITFETVEVSPKISTPPVLKLAAEQ----------APTGRVEREKTTRSN-- 259 LCFVIE +QI+F V + + T + P + E+ T N Sbjct: 241 LCFVIEPEQISFANVAATEEKVTSTDKTQEQAEHSPSSVTESIQPAAQTEQPATIEKNVA 300 Query: 260 -------------------------------------ESTSIRVAVEKVDQLINLVGELV 282 ESTSIRVAVEKVDQLINLVGELV Sbjct: 301 ELNKNSQADEVTKVATTLPPTATPAPARKPVVAQAKTESTSIRVAVEKVDQLINLVGELV 360 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 ITQSMLAQ S L+P H DL++ + QLQRN+RDLQESVMSIRMMPMEYVFSR+PR+VRD Sbjct: 361 ITQSMLAQHSDTLEPSIHSDLLSCIAQLQRNSRDLQESVMSIRMMPMEYVFSRFPRVVRD 420 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 LAGK+ K+VEL ++GSSTELDKSLIE+IIDPLTHLVRNSLDHGIE+P R+AAGK G Sbjct: 421 LAGKMHKKVELNMIGSSTELDKSLIEKIIDPLTHLVRNSLDHGIEMPADRIAAGKPEAGQ 480 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTA 462 L LSAEHQGGNICIEVTDDGAGLNRERIL KA S GL VSENMS++EVAMLIFAPGFSTA Sbjct: 481 LTLSAEHQGGNICIEVTDDGAGLNRERILKKAISSGLAVSENMSNEEVAMLIFAPGFSTA 540 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 E VTDVSGRGVGMDVVKRNIQ+MGG ++I + G GT IRILLPLTLAILDGMSV+V DE Sbjct: 541 EVVTDVSGRGVGMDVVKRNIQEMGGQIQISFEVGKGTRIRILLPLTLAILDGMSVKVNDE 600 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 VFILPL V+ SLQP E D++PLAG E++L+VRGEYLP++EL + FN+ GA+T+ TQ I Sbjct: 601 VFILPLGTVVSSLQPEEEDIYPLAGDEKLLQVRGEYLPLIELHRTFNIEGAQTDITQAIA 660 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 VI+QS GRRYALLVD+L+GQHQVVVKN+ESNYRKVPGISAATI+GDGSVALI+DV LQ Sbjct: 661 VIVQSAGRRYALLVDKLVGQHQVVVKNIESNYRKVPGISAATIMGDGSVALILDVPELQR 720 Query: 643 INREQ 647 ++ Q Sbjct: 721 LSHSQ 725 >UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34617 Length = 685 Score = 699 bits (1805), Expect = 0.0, Method: Composition-based stats. Identities = 390/668 (58%), Positives = 480/668 (71%), Gaps = 26/668 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELL DMEQHLL L P PD+EQLNAIFR+AHSIKGGA TFGF+ L Sbjct: 1 MDITEFYQTFFDEADELLRDMEQHLLELDPFDPDSEQLNAIFRSAHSIKGGAATFGFTQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TTH +ENLLD+AR E+ L DII++FL+ KD+M QLDAYK PD +F IC+ Sbjct: 61 QNTTHTLENLLDKARHDELTLTPDIIDVFLDAKDVMASQLDAYKNDSLPDEDTFKRICEV 120 Query: 123 LRQLALEAKG----ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 L ++ A+ T A T++ + +Q I L++LK EVDLL +E Sbjct: 121 LSRVENRAEEVAETGTAIAETKVEDAVVEDTPAKQGEYSHYFMISLNQLKENEVDLLADE 180 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP-------- 230 L L K A+SL A + + DDI+ VLCFV++ QI+ E + + Sbjct: 181 LSLFGHLYHTEKTANSLQAWVGTNTDIDDISGVLCFVVDESQISHEVISFADCLAFSKEE 240 Query: 231 --------------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + A APT + +S+SIRVAVEKVDQLIN Sbjct: 241 TLLNDDKVAANEVTEPQVDTPQSSAKPAAPTTAKKTAIAKPKGDSSSIRVAVEKVDQLIN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LVGELVI QSML Q S +D + DL++S+ QL+RN+R LQESVMSIRMMPM+YVFSR+ Sbjct: 301 LVGELVIIQSMLTQHSQHVDQNEYSDLLSSIVQLERNSRALQESVMSIRMMPMDYVFSRF 360 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR+VRD+A KLGK++EL + GSSTELDKSLIERI+DPL HLVRNSLDHGIE PE R+A G Sbjct: 361 PRMVRDIASKLGKKIELKVEGSSTELDKSLIERIVDPLNHLVRNSLDHGIEKPEVRVANG 420 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFA 456 K G L L+A HQ GNICIEV DDGAGLNRERILAKA SQG+ V + MS+DEVAMLI A Sbjct: 421 KPEAGTLTLAAAHQSGNICIEVRDDGAGLNRERILAKAKSQGMNVHDGMSNDEVAMLIMA 480 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 PGFSTAE VTDVSGRGVGMDVVKRNIQ MGG ++I +G GT IRILLPLTLAILDGMS Sbjct: 481 PGFSTAEVVTDVSGRGVGMDVVKRNIQDMGGRIQIGFTEGKGTIIRILLPLTLAILDGMS 540 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V+VA++VFI+PL+A++ +LQPR+ D++ LAG E++L VRGEYLP+VEL +VF++ A+ Sbjct: 541 VKVAEDVFIVPLSAIISTLQPRQEDIYRLAGEEKMLLVRGEYLPLVELHQVFSIEEAERN 600 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 IV+I+Q+ G R+ALLVD+L+GQ QVVVKN+ESNYRK+PGISAATI+GDGSVALI+D Sbjct: 601 LDNSIVLIIQNAGHRFALLVDKLVGQQQVVVKNIESNYRKIPGISAATIMGDGSVALILD 660 Query: 637 VSALQAIN 644 V+ LQ +N Sbjct: 661 VAELQKMN 668 >UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n=14 Tax=Proteobacteria RepID=B2AI50_CUPTR Length = 675 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 407/667 (61%), Positives = 478/667 (71%), Gaps = 17/667 (2%) Query: 1 MSMDIS--DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS+DI FYQTFF+EA+ELL +MEQ LL L EAPDAE LNAIFRAAHSIKGGA TFG Sbjct: 6 MSVDIDITQFYQTFFEEAEELLVEMEQLLLGLDIEAPDAEHLNAIFRAAHSIKGGAATFG 65 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F+ L ETTH+ ENLLD RR E+ L II+ FLETKD++Q+QL+AY+ EPD + Sbjct: 66 FAALTETTHIFENLLDRTRRQELALTRTIIDTFLETKDVLQDQLNAYRNGTEPDPETLAR 125 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 IC L+QLA EA G + + + + + +I L ++ A + LL EE Sbjct: 126 ICAVLQQLAQEAAGHDAAPAPAPAPAPVAAAAPAAAPAGGGLKIRLIKVSASDQALLREE 185 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L +L +T + L L + DDI AV CFVI+ DQI E +P + P Sbjct: 186 LANLGDITGQQETNGELVVWLNTQCSADDIIAVCCFVIDIDQIVIEAAAGAPAAAPAPAP 245 Query: 239 KLAAEQAP--------------TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 A AP ++ SIRV EKVDQ+INLVGELVIT Sbjct: 246 AEVAVPAPAPVAAAPAPAPAAREKAKAAPAPAPAHGEGSIRVPTEKVDQIINLVGELVIT 305 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 QSMLAQ +S LDPV L + MGQL+RNARDLQE+VMSIRMMPM+YVFSR+PRLVRDLA Sbjct: 306 QSMLAQTASSLDPVLFDRLFSGMGQLERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDLA 365 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 KLGKQ++L G +TELDKSLIERIIDPLTHLVRNSLDHGIE P+KR+AAGK+ G LI Sbjct: 366 SKLGKQIDLVTFGKATELDKSLIERIIDPLTHLVRNSLDHGIETPDKRVAAGKDPTGQLI 425 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQ 464 LSA+H GGNI IEV+DDG GLNRERILAKA GL VSE ++D+EV LIFAPGFSTAE Sbjct: 426 LSAQHHGGNIVIEVSDDGGGLNRERILAKAIQNGLPVSETITDEEVWQLIFAPGFSTAEV 485 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 +TDVSGRGVGMDVVKRNIQ+MGGHV+I S+ G GTTIRI+LPLTLAILDGMSV+V +E F Sbjct: 486 ITDVSGRGVGMDVVKRNIQEMGGHVQISSRPGLGTTIRIVLPLTLAILDGMSVKVGEETF 545 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 ILPLN VMESLQP+ D+H A +RV+ VRGEYLP++E+ +VFNVA A E TQGI VI Sbjct: 546 ILPLNCVMESLQPKAEDVHTAANSDRVMHVRGEYLPLLEMHRVFNVADALQEPTQGIAVI 605 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 LQ+ G+R+ALLVDQLIGQHQVV+KNLE+NYRKVP ISAATILGDGSVALIVDV ALQ Sbjct: 606 LQAEGKRFALLVDQLIGQHQVVLKNLETNYRKVPCISAATILGDGSVALIVDVGALQRTG 665 Query: 645 -REQRMA 650 R Q A Sbjct: 666 VRRQEPA 672 >UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae RepID=D0FQ58_ERWPY Length = 656 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 391/652 (59%), Positives = 479/652 (73%), Gaps = 13/652 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++DF Q FF EA+ELL+DMEQHLL+L PD EQLNAIFRAAHS+KGGAGTFGFSVL Sbjct: 1 MDLNDFSQVFFSEAEELLSDMEQHLLLLDIARPDIEQLNAIFRAAHSLKGGAGTFGFSVL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 QETTHL+ENLLD+AR GE+QL+ D++NLFLE KDIMQ QL+AY+ QEPD SF YIC A Sbjct: 61 QETTHLLENLLDKARCGEIQLSRDMVNLFLEGKDIMQAQLEAYQSLQEPDEESFRYICAA 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L+Q+AL KGE V + + + + +S + LS +K E LL +EL +L Sbjct: 121 LQQIALSEKGELSQPVVQPATPSVT----HAPKSDGRLTVTLSGIKPQEQPLLLDELANL 176 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA- 241 T+ + L + D+I AVLCFV++ QI P + A Sbjct: 177 GTVISQRPVGSGIEVELETSVLGDEIGAVLCFVLDETQIDIRPSAAVSAPIEPDAVAPAQ 236 Query: 242 -------AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 AE + E K T ES SIRVAVEKVD +IN VGEL+ITQS+ +Q + + Sbjct: 237 IPAVSAAAEVIVNAKPEMAKRTTGTESGSIRVAVEKVDMIINQVGELIITQSIFSQLTEQ 296 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LDP +G L++S+ QL+RNAR+LQ+SVMSIRMMPM+YVFSR+PRLV DL +L K VELT Sbjct: 297 LDPAKYGMLLSSVAQLERNARELQQSVMSIRMMPMDYVFSRFPRLVHDLGARLNKDVELT 356 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 L+G + ELDKSLIERIIDPLTHLVRNSLDHGIE ++RL GK++ GNL LSAEH GGNI Sbjct: 357 LLGGAAELDKSLIERIIDPLTHLVRNSLDHGIEEKDERLRKGKSATGNLTLSAEHHGGNI 416 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 IEV DDGAGLNRE++LAKA S+G ++++ SDDEV MLIFA GFSTA VTDVSGRGVG Sbjct: 417 VIEVRDDGAGLNREKLLAKARSRGTQIADSASDDEVWMLIFAAGFSTATNVTDVSGRGVG 476 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV+RNI MGGHVE+ S + GTTIRILLPLTLAILDGMSV+V DE+++LPLN VMES Sbjct: 477 MDVVRRNILAMGGHVEVCSVKDQGTTIRILLPLTLAILDGMSVKVGDEIYVLPLNVVMES 536 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 L+P L+ G R+++VRGEYLP+ EL + F+V+G + + GI+VI+QSGG RYAL Sbjct: 537 LKPSADMLYQFVGQSRLVQVRGEYLPLTELRQAFDVSG-EAASEDGIIVIVQSGGCRYAL 595 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 VDQL+GQHQVVVKNLE NYRKVPGISAATILGDGSVALI+DV L +++ + Sbjct: 596 WVDQLVGQHQVVVKNLEHNYRKVPGISAATILGDGSVALILDVIELASLSHQ 647 >UniRef50_B2UHV0 CheA signal transduction histidine kinase n=22 Tax=Proteobacteria RepID=B2UHV0_RALPJ Length = 724 Score = 673 bits (1736), Expect = 0.0, Method: Composition-based stats. Identities = 369/697 (52%), Positives = 463/697 (66%), Gaps = 45/697 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S F+ FF+EA+ELL DME+ LL L P ++ LNAIFR AHSIKGGA TFGF+ Sbjct: 1 MNLDLSQFFGAFFEEAEELLVDMERLLLNLDVANPSSDDLNAIFRCAHSIKGGAATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH+ E++LD AR G +QL ++++ FLETKD+++ QLDAY+Q D A+ +Y+ Sbjct: 61 HMTELTHVAESILDRARTGTLQLRENMVDAFLETKDVLKSQLDAYRQEHPIDTATLEYMV 120 Query: 121 QALRQLALE----------------AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL 164 L L E A E +A VV ++ + + I L Sbjct: 121 AKLNSLTAEDGAPVAAAPAVAAPVAAAPEPVAAPQPAPVVVEAPAAEVVGDIEGGLDIKL 180 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 + + +L+ EL HL T+ + + +L DDI AV CF+I+ADQI Sbjct: 181 INVSNEDCELIVTELKHLGTVLRHARTGRNSDIVLQSTCTADDIIAVSCFIIDADQIVIT 240 Query: 225 -----------------------------TVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 + + + + AA P ++ Sbjct: 241 PHVGGAAPAAEAAAPVVAAPTPAAAQTEVHAPAANEAAPAQAVAAAAVPVPVRPAAADQK 300 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 TSIRV VEKVDQLINLVGELVITQ+MLAQ + DPV + L + QL RNAR Sbjct: 301 PTVAAETSIRVGVEKVDQLINLVGELVITQAMLAQTAQAFDPVLNERLFAGLSQLTRNAR 360 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 DLQE+ MSIRMMPM+YVF+R+PRLVRDLA KLGKQVEL+ G STELDK LIERIIDPLT Sbjct: 361 DLQEAAMSIRMMPMDYVFNRFPRLVRDLAHKLGKQVELSTFGKSTELDKGLIERIIDPLT 420 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRNSLDHGIELPE R+AAGK++ G L+LSA HQGGNI IEV+DDG GLNR++IL KA Sbjct: 421 HLVRNSLDHGIELPEARVAAGKDATGQLLLSAAHQGGNIVIEVSDDGQGLNRDKILKKAR 480 Query: 436 SQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 +GL VS+NM+DDE+ LIFAPGFSTA+QVTDVSGRGVGMDVVK+NIQ MGG+VEIQS++ Sbjct: 481 ERGLPVSDNMTDDEINQLIFAPGFSTADQVTDVSGRGVGMDVVKQNIQSMGGYVEIQSQK 540 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G GTTIRI+LPLTLAILDGMSV+ DEVFILPL+ V ESLQPR D+ + GG R+L+VR Sbjct: 541 GKGTTIRIVLPLTLAILDGMSVKTGDEVFILPLSCVAESLQPRPEDIKAVPGGGRLLKVR 600 Query: 556 GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 EYL +V +++ F + + + ++GIVVIL S G++ AL VD+L+GQ QVVVKNLE+NYR Sbjct: 601 NEYLTLVPMYERFRITPSLPDPSEGIVVILDSEGKKIALQVDELVGQQQVVVKNLETNYR 660 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 +VPGIS ATILGDGSVALIVDVSAL R N Sbjct: 661 RVPGISGATILGDGSVALIVDVSALMRETRSGHSENA 697 >UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 Tax=Gammaproteobacteria RepID=A1WZ19_HALHL Length = 703 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 285/690 (41%), Positives = 399/690 (57%), Gaps = 42/690 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F QTFF+E+ E L ME LL L PE+PD E LN +FRAAHSIKGGAGTFG S Sbjct: 1 MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH ME LLD R G+ + D +N+ L D ++ L A + Q DA + Sbjct: 61 AVSDFTHRMETLLDRLRDGKQAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQ 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVA-------------------------KSEPQDEQ-S 154 Q L + +A A + + EPQ + Sbjct: 121 QRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRGGGGGGGWLIRFEPQPHLFA 180 Query: 155 RSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP--GDIAEDDITAVL 212 PRR+ L+ GE+++ E + L + L+ L D+ E + V Sbjct: 181 TGNDPRRLFLALQDLGELEV-ECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVF 239 Query: 213 CFVIEADQITFETVE------VSPKISTPPVLKLAAEQAPTG------RVEREKTTRSNE 260 +V + ++ + +E V+P P + + E P + R Sbjct: 240 EWVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGG 299 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 ++SIRV EK+D LI++VGELVITQSML+Q E +L + QL+RN R+LQE+ Sbjct: 300 NSSIRVDTEKIDALIDMVGELVITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQEN 359 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM IRM+P+ + +SR PR+V D + LGK V+ + G TELDK+++E+IIDPL HLVRN Sbjct: 360 VMRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTELDKTVMEKIIDPLVHLVRN 419 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 S+DHGIE PE+R AAGK G + + A H+GGNI IE+ DDG G+NR+++LAKA S GL Sbjct: 420 SVDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLL 479 Query: 441 VS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 + DD+V LIF PG ST EQ T+ SGRGVGMDVVKRN++ + G++ ++S QG GT Sbjct: 480 EDGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGT 539 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 TI I LPLTL+ILDG RV D+ +I+PL +V+ESLQ + L + G V R Y+ Sbjct: 540 TITISLPLTLSILDGQLFRVGDQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYV 599 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 PIV L ++F+ + E G++VI++ + VD L+ Q QVV+K+LE+NY +VPG Sbjct: 600 PIVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLDQQQVVIKSLEANYLQVPG 659 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRM 649 I+ ATILGDG+VALI+D++ L ++R R Sbjct: 660 IAGATILGDGTVALILDIAGLIEMSRGGRR 689 >UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD8_LARHH Length = 670 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 316/681 (46%), Positives = 415/681 (60%), Gaps = 49/681 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQP-EAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D+S F+ FFDEA E L +E+ LL QP + D E LNAIFRAAHSIKG AGTFGF Sbjct: 1 MSIDLSQFHAAFFDEAAEHLETIERLLLESQPGQTTDGEALNAIFRAAHSIKGSAGTFGF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + + TH +ENLLD RRGE+ L I++ L+++D++ +QL A++ Sbjct: 61 ADIAGFTHGLENLLDRIRRGELPLTAGRISVCLKSRDVIADQLAAHRDGATAVDPGRLAE 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 +A A + + P VT SR ++ + G + L++ L Sbjct: 121 IEAALLAAHDEGTDMPVPVTS-------------SRPDGGHYLLCWDRQLGHPEGLQDRL 167 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS---------- 229 L T+ + + L L ++ DI L F + Q E +E Sbjct: 168 AALGTVQPCGEQGEELVFQLQSGLSATDIAESLAFWLPPGQFRLEHLESQGDEAFGVFVD 227 Query: 230 -------------------------PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 P +T V AE A TG + TSI Sbjct: 228 TQRVVATSATEPAAPVDEGWGLFAPPAAATADVSPPVAEPAATGSTPALRQATPQPETSI 287 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV VEKVDQL+N +GELVITQSMLAQ+ L + +L M QL+R R+LQE+VMS+ Sbjct: 288 RVNVEKVDQLLNRIGELVITQSMLAQQVERLGTLASEELQRGMAQLERTTRELQEAVMSV 347 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF R+PRLVR+L KLGK VEL ++G TE+DKS +E++ DPLTHLVRNSLDH Sbjct: 348 RMLPVASVFGRFPRLVRELGQKLGKAVELQVIGEQTEIDKSFVEKLTDPLTHLVRNSLDH 407 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 G+E E R AGK VG L L A HQGG+I IEV+DDGAGL R+RILAKA QGL VS+ Sbjct: 408 GLESAEGRAGAGKPPVGRLTLRAFHQGGHIVIEVSDDGAGLQRDRILAKAREQGLNVSDT 467 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 M+D EV LIF PGFSTA+ VTDVSGRGVGMDVV+RNI+ MGG + I+S G GTTI + Sbjct: 468 MNDAEVWQLIFEPGFSTAQAVTDVSGRGVGMDVVRRNIEAMGGSIRIESLAGVGTTISLH 527 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LPLTLAILDGMS+ + +E++ILPL+ V+ESLQPR D+ LAG R+L VRGE LP++ L Sbjct: 528 LPLTLAILDGMSIAIGNEIYILPLSQVVESLQPRAEDVFTLAGQHRLLRVRGECLPLLAL 587 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 W++F++ EA +G+V+I+ +R ALLVD L+ Q Q VVKNLE+NYR+V G++AAT Sbjct: 588 WEIFDIQPRVREAHEGLVIIITVASQRVALLVDDLVSQQQFVVKNLETNYRRVRGLAAAT 647 Query: 625 ILGDGSVALIVDVSALQAINR 645 ILGDG VA I+D + + + + Sbjct: 648 ILGDGQVAFILDGAEVVRMGQ 668 >UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCZ2_9PROT Length = 728 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 332/727 (45%), Positives = 446/727 (61%), Gaps = 81/727 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+ FY+ FF+E+ ELLADME LL L +PD E LNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSTDLEQFYEIFFEESSELLADMEACLLRLDVNSPDLEDLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+GE+++ +++++ FL+ D+++ QL ++ + D + IC Sbjct: 61 DMTEMTHMLETLLDRLRKGELEVRSEMVDAFLKAGDVIKAQLAGHRGEGQADPTVAEAIC 120 Query: 121 QALRQLALEAKGETPSAV--------TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 + L++L+ E ET S V TR +V++ S I E Sbjct: 121 EELKRLS-EDPQETLSIVDTKTVFFETRTKLVSQEADVASGIDKVSHENIATGLSFIIEF 179 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDI------------AEDDITAVLCFVIEADQ 220 ++ L L ++G L + P + +E+++ L FV++ Sbjct: 180 SSMDLTSAALENLFSNLRGLGDLENLTPANAEGHYKLALTTSSSEENVWETLAFVVDPTS 239 Query: 221 ITFETVE---VSPKISTPPVLKLAAEQAPTGRVERE------------------KTTRSN 259 + E S K++ +L + A E E R+ Sbjct: 240 LKIEATTNDGTSTKVAEIEILNESVRDAGVLVEEDELACKTPSAPGYGFFPGAPAAPRNI 299 Query: 260 ESTSIRVAVEKV---------------------------------------DQLINLVGE 280 E + I + ++ DQ+INLVGE Sbjct: 300 EDSEINLDQAQLPNTCSNKNESQVTNKSSGKTNTAASVSETSSIRVSIEKVDQMINLVGE 359 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVITQ+MLAQ +S+ DPV L + M QL+RN RDLQESVMSIRMMP+ +VFSRYPR+V Sbjct: 360 LVITQAMLAQTASQYDPVLFEKLYSGMSQLERNTRDLQESVMSIRMMPISFVFSRYPRVV 419 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDLA KL K+VEL VG +TELDK LIE+I DPLTHLVRNSLDHG+E+ EKR+AAGK + Sbjct: 420 RDLAAKLNKRVELRTVGENTELDKGLIEKIADPLTHLVRNSLDHGVEVAEKRIAAGKPAQ 479 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFS 460 G + L A HQGG+I IEV+DDGAGLNR +ILAKA +GL V + M+D EV +LIF GFS Sbjct: 480 GTITLRAFHQGGSIVIEVSDDGAGLNRGKILAKAKERGLPVHDAMTDQEVWLLIFEAGFS 539 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TA+QVTDVSGRGVGMDVVKRNIQ MGG ++I+S G+GT I I LPLTLAILDG+SV V Sbjct: 540 TADQVTDVSGRGVGMDVVKRNIQSMGGRIDIESTLGSGTRISIRLPLTLAILDGLSVVVG 599 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 D++FI+PLN + ESLQP D+ ++G RV++VRGEYLP++ L + FN+ TE +G Sbjct: 600 DQMFIVPLNYITESLQPAATDIKTVSGQGRVVQVRGEYLPVIALHEFFNLRPNVTEIHKG 659 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 I+VIL++ G + AL VD L+GQHQVV+K+LESNYR+V G S ATI+GDG VALI+D +AL Sbjct: 660 ILVILEAEGHKAALFVDDLVGQHQVVIKSLESNYRRVQGASGATIMGDGKVALILDAAAL 719 Query: 641 QAINREQ 647 ++++ Sbjct: 720 VMASQQE 726 >UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Tax=Proteobacteria RepID=B9M712_GEOSF Length = 696 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 320/674 (47%), Positives = 426/674 (63%), Gaps = 34/674 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S+D++ F QTFF+E E LA++E+ LL L PD E+LNA+FR+AH+IKG AG FGF Sbjct: 4 SIDMARFCQTFFEECSEHLAEIERILLSLDLNRPDEEELNALFRSAHTIKGSAGIFGFED 63 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + THL+E+LLD R EM L +++LFL+ KD + QL ++ + D + +C Sbjct: 64 MTSVTHLLESLLDRIRGHEMLLTASMVDLFLKAKDAIALQLAGHRDGERVDLQFIEEVCC 123 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL--KAGEVDLLEEEL 179 +LR L + +PS L V + + R + L + +D L +EL Sbjct: 124 SLRHLTEQDALPSPSTKGDLPAVQAQTEDGKMQSTFELRFSPDTDLFMRGARLDYLFDEL 183 Query: 180 GHLTTLTDVVKGAD--------------SLSAILPGDIAEDDITAVLCFVIEADQITFET 225 G L LT AD L G + +I V FV + DQ+ Sbjct: 184 GELGELTAQAIIADAPPVEQLDPEHCHTRWQLWLAGTCNDMEIRDVFEFVADDDQLNIRR 243 Query: 226 VEVS--------PKISTPPVLKLAAEQAPTGRVEREKTTRSN---------ESTSIRVAV 268 V+ + P+ T + AAE P GR +K + +SIRV V Sbjct: 244 VQSAEIGNDRPEPQPVTASGSQTAAETQPFGRRAYDKDETAPGAFGRRGGEAESSIRVGV 303 Query: 269 EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 KVDQLIN VGELVITQ+ML Q +LDPV +L + QL+RN RDLQ+SVMSIR++P Sbjct: 304 AKVDQLINQVGELVITQAMLDQMGRQLDPVLFQNLHQGLLQLERNTRDLQQSVMSIRLVP 363 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 + VF+R+PRLVR+LA KLGKQVEL +VG +TELDK L+E+I DPLTHLVRN+LDH +E+ Sbjct: 364 ISIVFNRFPRLVRELAAKLGKQVELKMVGETTELDKGLVEKIADPLTHLVRNALDHALEV 423 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDD 448 PE R+AAGK G++IL A GG I I+V DDGAGLNRE+IL KA +G+ ++ MSD+ Sbjct: 424 PELRIAAGKGPTGSVILQASQVGGRIVIDVIDDGAGLNREKILTKAVERGIATADTMSDE 483 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 EV LIFAPGFSTAE VTD+SGRGVGMDVV +N+Q +GG V IQS+QG GT + I LPLT Sbjct: 484 EVWQLIFAPGFSTAEAVTDISGRGVGMDVVLKNVQSLGGRVAIQSEQGKGTRVTISLPLT 543 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAILDG+SV V +E I+P+NA++ESLQP +L + G E V++VRGEY+PI+ L ++F Sbjct: 544 LAILDGLSVGVGNERLIVPINAIVESLQPTGENLKAINGNE-VVQVRGEYIPILRLHRIF 602 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 N+ A T+ GI++I++ G + A+LVD L + QVV+K++E NYRKV G S A ILGD Sbjct: 603 NLTDAVTDPRHGILMIIEVEGEKGAMLVDNLQDELQVVIKSMEENYRKVEGTSGAAILGD 662 Query: 629 GSVALIVDVSALQA 642 G VALI+DV AL Sbjct: 663 GRVALILDVGALMQ 676 >UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPQ9_HAHCH Length = 695 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 276/695 (39%), Positives = 396/695 (56%), Gaps = 42/695 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+S F+ FF+E+ E + +E LL + +APD E +N IFRAAHSIKGG+ TFGFS Sbjct: 1 MSMDLSRFHDVFFEESFEAVNTIEASLLEVDLDAPDPESINIIFRAAHSIKGGSATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH+MENLLDE R G+ +L I+++ LE+ D M+ L + K S+ F Sbjct: 61 QVAAYTHVMENLLDEVRAGKRRLTQPIVDVLLESVDAMRLLLSSAKASENIPEEEFTQHK 120 Query: 121 QALRQLALEAK------------GETPSA--------VTRLSVVAKSEPQDEQSRSQSPR 160 L ++ + G P+A V+ VV + R P Sbjct: 121 SKLEAISQDQASLTTSNAAFTDSGAAPAAESFDADDGVSGWRVVFTPHKEM-MQRGNDPL 179 Query: 161 RIILSRLKAGEVDL-LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEAD 219 R+ E D +E +L L L + D F D Sbjct: 180 RLAREVAALAEGDAEIECDLSALPDWEHFEPLNSYLGWTVRLRRPVDKAQIDDAFAWVED 239 Query: 220 QITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN---------------ESTSI 264 + V + S P + P+ V+ + ES SI Sbjct: 240 ECDMAIVPIPKAQSAPSQQAMETLAEPSAPVDEQAQASDKGASPAAKQNKPAMVAESQSI 299 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +EKVD LIN+VGELVITQSML S + L+ + QL+R R LQE VM I Sbjct: 300 RVDLEKVDALINMVGELVITQSMLNMLSEDEALQGMEKLLQGLTQLKRQTRALQEGVMQI 359 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ + F+R+PR+VRDL+ +LGK +EL L G +TE+DK++IE+I DPL HLVRNS+DH Sbjct: 360 RMLPISFCFNRFPRMVRDLSRQLGKDIELMLSGENTEVDKTVIEKITDPLVHLVRNSVDH 419 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 GIE P R A GK G++ L A HQ GNI IEV DDG GL+ + +L+KA +GL + Sbjct: 420 GIESPADRTAKGKPEHGSVYLRAYHQVGNIVIEVEDDGKGLDPQVLLSKAKRKGLIAGDA 479 Query: 445 -MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 +S+ ++ LIF PGFST E+ +D+SGRGVGMDVVKRN+Q +GG ++++S+ T I Sbjct: 480 ILSEAQIFELIFLPGFSTKEEASDLSGRGVGMDVVKRNVQSLGGSIQVESELNRRTRFTI 539 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLAI+DG + + +E++++PL ++ESLQP + ++ +AG +++RG YLP++ Sbjct: 540 RLPLTLAIMDGQLISLGEELYVIPLVTIIESLQPDPSMINRVAGTHETIKLRGAYLPVLR 599 Query: 564 LWKVFNVAGAKT----EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 L + + A ++ T GI+VI++ RR+ L VD+L+ Q Q+V+K+LE NYR +PG Sbjct: 600 LSEALDAAQNESKKSKPLTDGIIVIVEHESRRFGLFVDELLSQQQIVIKSLEENYRMIPG 659 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +SAATILGDG VALI+DVS L + ++ ++ A Sbjct: 660 VSAATILGDGRVALILDVSGLSQLQKDSEVSYADA 694 >UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blandensis MED297 RepID=A4BJG3_9GAMM Length = 651 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 273/642 (42%), Positives = 375/642 (58%), Gaps = 3/642 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F++ FF+E+ E L +EQ L+ L P PDAE LN IFRAAHSIKG +G FGF+ Sbjct: 1 MSMDLGQFHEVFFEESQEHLDALEQGLMALDPSQPDAELLNTIFRAAHSIKGSSGVFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L + TH+MEN LDE R+ Q ++ L D ++ + Y+ + D Sbjct: 61 ALGDITHVMENRLDEWRKEISQPQASQVDHLLTVVDALRHLVSVYQNGEPVDEQWVQDTI 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L + + V + + + + G EE Sbjct: 121 DGLNAKFDAYEIKNSEQSQSSEPVVDEDDDEGFGFFEPLEAEAEADDDVGYGFFEEEPAP 180 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + + + + +D L E +V S P K Sbjct: 181 DEDEGFGFFEEPEPEAEFAAANTEAEDEGWGL--FEEPGSSDTSPPQVDAVESKPTETKA 238 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A+ A + +IRV VEKVD LINLVGELVITQSMLA LD N Sbjct: 239 PAKSAVSNPTTESAQAAQKSGGTIRVNVEKVDSLINLVGELVITQSMLAMVGQNLDDANQ 298 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 + + L RN R++QESVMSIRM+P+ +VF+R+PR+ RD AGKLGK+V L + G T Sbjct: 299 EKMNGVIETLHRNTREIQESVMSIRMLPISFVFNRFPRVARDTAGKLGKKVNLVIEGGDT 358 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK L+E++ DPLTHL+RNS+DHGIE P RL AGK G + LSA QGGNI I V D Sbjct: 359 EIDKGLVEQLADPLTHLMRNSIDHGIESPSDRLQAGKPETGTVRLSARQQGGNIIISVID 418 Query: 421 DGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 DGAGLNR++IL KA +G+TV+ + D+ + LIF PGFSTA+ VTDVSGRGVGMDVVK+ Sbjct: 419 DGAGLNRDKILNKARERGMTVNADSPDEAIWPLIFEPGFSTADAVTDVSGRGVGMDVVKK 478 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 N+ +GG ++I S G GTT+ ++LPLTLAILDGM+V + E +I+PL ++ES+QP Sbjct: 479 NLSNLGGRIDIDSVPGYGTTLSLILPLTLAILDGMAVSLGSETYIIPLGNIVESIQPNAE 538 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + L G+ +L VRG Y P+V L +V +V T GIV++ +SG RR+ +LVD+L+ Sbjct: 539 QVKTL-NGDELLNVRGHYWPVVRLHRVMSVRPRFERITDGIVILTESGKRRFGILVDELL 597 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 GQ QVV+K+LE +Y+++PG+ AT++GDG VA I+D+ +L A Sbjct: 598 GQQQVVIKSLEQHYKRIPGVGGATVMGDGQVAFILDLESLGA 639 >UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadaceae RepID=B2SVD4_XANOP Length = 669 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 295/674 (43%), Positives = 412/674 (61%), Gaps = 29/674 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F+ TFF+E+ E L ME LL L+ D E +N++FRAAHSIKGGA TFGF Sbjct: 1 MSMDLQRFHATFFEESREGLDAMEAGLLSLEEGNRDPEIINSVFRAAHSIKGGAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH++E LLDE R + QL + ++ L + D+++ L + D + + Sbjct: 61 AIAGLTHVLETLLDELRSNKRQLEPNAVDAMLGSVDVLRALLREAEHGTPADPTAVKAVH 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L + GE P A ++ + EP+ + +S + E LG Sbjct: 121 TRLNAVLA---GEAPVAAV-VAKPKEEEPEAWHIGFTPAPSLFMSGNDPLRIIRELEHLG 176 Query: 181 HLTTLT-----------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV- 228 L D ++ + L G I + I +V++ ++ + V Sbjct: 177 PLQIAARLERMPGFENIDPLEAYLAWDLGLIGKIPRNKIEDTFAWVVDDCELDIRPMAVP 236 Query: 229 ------------SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + + AA + K + +SIRV+V+KVD LIN Sbjct: 237 GPPPSLAVDAPAAAPGAAVTAAPSAAAEPAAAAATPAKAAAAEAESSIRVSVDKVDALIN 296 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LVGELVITQ+ML Q S+ LDP + L + L+RN RDLQE+V+ +RM+P++ VF R+ Sbjct: 297 LVGELVITQAMLKQVSAGLDPAHAEQLFAGLDLLERNTRDLQEAVIGVRMLPVDAVFRRF 356 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PRLVRDL+ +LGKQV L +G STELDK LIE+I DPL HLVRNS+DHG+E+P+ R A+G Sbjct: 357 PRLVRDLSSRLGKQVRLRTIGESTELDKGLIEKIADPLVHLVRNSIDHGLEMPDARRASG 416 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFA 456 K+ G + L+A HQGG+I IEV+DDG GLNR +IL KAA +G+ V +N +D +V LIFA Sbjct: 417 KDETGTITLAASHQGGHIVIEVSDDGRGLNRAKILEKAAERGIAVPDNPTDAQVWDLIFA 476 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 PGFSTA+ VTD+SGRGVGMDVV+RNIQ +GG V+++S G+GT + I LPLTLAILDGM+ Sbjct: 477 PGFSTADAVTDLSGRGVGMDVVRRNIQGLGGEVQLESNAGSGTRVLIRLPLTLAILDGMT 536 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V VA E ILPL+ V+E+LQP D+ +AG RVL VRGEYLPI+ L + G ++ Sbjct: 537 VSVAGETLILPLSYVLEALQPAAEDIRSMAGDGRVLRVRGEYLPILSLTNYYGFGGQQS- 595 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 + + +VV+++ G++ AL VD+L+GQ QVVVKN+E+NYR++PG+S ATILGDG V+LIVD Sbjct: 596 SQESLVVVVEGDGQKIALEVDELLGQQQVVVKNIENNYRRIPGVSGATILGDGRVSLIVD 655 Query: 637 VSALQAINREQRMA 650 + L + + A Sbjct: 656 IGGLVRSLKVPQAA 669 >UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3LX06_VIBCM Length = 720 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 276/715 (38%), Positives = 400/715 (55%), Gaps = 64/715 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E LD R + QL ++ L++ D+++ LD+ +Q D A + Sbjct: 61 EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120 Query: 121 QALRQLALEAKGE--------------TPSAVTRLSVVAKSEPQDEQSR----------S 156 L+ L + + T + + + Q + R Sbjct: 121 AELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSG 180 Query: 157 QSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCF 214 P RI+ + G +E + L L ++ LS L GD++E+D+ + + Sbjct: 181 NDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDW 240 Query: 215 VIEADQI----------------------------TFETVEVSPKISTPPVLKLAAEQAP 246 V + + VE + P V A AP Sbjct: 241 VEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAP 300 Query: 247 TGRVEREKTTRSNEST-----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 +E T T SIRV +EKVD LINLVGELVITQSML + ++ Sbjct: 301 VIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLD 360 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L + G TE Sbjct: 361 KLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTE 420 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK G + L A HQGG+I +E++DD Sbjct: 421 LDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDD 480 Query: 422 GAGLNRERILAKAASQGLTVSE----NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 GAG++ +++ KA +G+ + +++D ++ LIFAPGFSTAEQV+D+SGRGVGMDV Sbjct: 481 GAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDV 540 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+RNI+++GG +E+ S+ G G+ I LPLTLAILDG V+VAD+V+++PL ++ES+Q Sbjct: 541 VRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQI 600 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 A + AGG + +R E +PI+ L + G + ++ ++S G R LLVD Sbjct: 601 NTASVKHAAGGIELYRLREENIPILRLQDELAM-GRSGSLEKRLICFVESAGHRVGLLVD 659 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+ L A ++ ++T Sbjct: 660 DLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKRSSSST 714 >UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 Tax=Clostridiales RepID=A1HN15_9FIRM Length = 677 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 232/681 (34%), Positives = 363/681 (53%), Gaps = 46/681 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDIS + F +E E L + + LL L+ + + L+ IFR+AH+IKG + T GF+ + Sbjct: 1 MDISQYLGIFLEETREHLQTLNRCLLELEHDPGNLAVLDEIFRSAHTIKGMSATMGFTAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP--DAASFDYIC 120 E TH MEN+LD R+ ++ N++II+ + D +++ ++ + E D Sbjct: 61 AELTHEMENILDLLRKSVLKANSEIIDALFKCVDTLEQSVEQVAANGETSLDIKPLVTTL 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL------------SRLK 168 AL + + + PS+V V A E Q+ L LK Sbjct: 121 TALAKGEMFTDSKAPSSVAARPVSAIDLNDTEVKIIQAANSQGLRAYEVQVRLREGCLLK 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSA---------ILPGDIAEDDITAVLCFVIEAD 219 + ++ L L + + A+ L ++ D D I L + E + Sbjct: 181 SARAYMVMSTLDTLGDVIKSIPPAEELEKENFDLSFQTVVITDAEPDKIKQALLSIAEIE 240 Query: 220 QITFETVEVSPKISTPPVLK---------------LAAEQAPTGRVEREKTTRSNESTSI 264 + E +P++ + E+ + + S+ Sbjct: 241 SVNVILCEATPRLEKAAAVAGQSDAESRRIGGKHDEETEKTVNPGLNTTADKKVKGGQSV 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +EK+D L+NLVGELVI ++ L Q DL+ ++ Q+ R DLQ VM + Sbjct: 301 RVDIEKLDTLLNLVGELVINKTRLEQIGITH---RLPDLVETIEQMDRVTTDLQAVVMKV 357 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF+R+PR++RDL+ +L K+V L + G TELD+++I+ I DPL HL+RN++DH Sbjct: 358 RMVPVGQVFNRFPRMIRDLSRELNKEVNLIIQGEETELDRTVIDEIGDPLVHLLRNAIDH 417 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV--- 441 GIE PE+R A GKN VG + L A H+G N+ I V DDG G+N E + KA +GL Sbjct: 418 GIESPEEREAKGKNPVGEIRLIARHEGNNVIIVVEDDGRGINPETVKQKAVQKGLITQAE 477 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 ++ M E LIF PGFSTA+ +TDVSGRGVGMD VK I+ +GG V++++K G+ Sbjct: 478 ADKMDVAEAIRLIFLPGFSTADNITDVSGRGVGMDAVKTKIESLGGMVDVETKVNEGSKF 537 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 +I LPLTLAI+ + V+V +E++ +PL+++ +++ D+ + E V+ +RG+ +PI Sbjct: 538 KIRLPLTLAIIQALLVKVGEEIYAIPLSSIDSTIKVGLPDIKTIQNHE-VILLRGQIIPI 596 Query: 562 VELWKVFNVAG-AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 V L KV NV + + VVI+ G +R ++VD LIGQ ++V+K+L + I Sbjct: 597 VRLAKVLNVPETGQKNQEELFVVIIHMGEQRAGVVVDTLIGQQEIVIKSLGKLLAGIKVI 656 Query: 621 SAATILGDGSVALIVDVSALQ 641 + ATILG+G VALI+DV +L Sbjct: 657 AGATILGNGQVALILDVGSLM 677 >UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KM54_SHEWM Length = 677 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 270/677 (39%), Positives = 396/677 (58%), Gaps = 23/677 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+S F Q FF+E+ E LA ME LL L+ PD E +N IFRAAHSIKGG+ TFGF+ Sbjct: 1 MEIDLSQFSQVFFEESLEGLASMESELLKLEVNEPDDESINTIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + THL+E LLDE R G Q+ TD ++ L + D+++ +DA + + + Sbjct: 61 QVADYTHLLETLLDEIRDGRRQMTTDHQDMLLLSVDLLRNMIDALMRKVDFADPLLAQLE 120 Query: 121 QALRQLALEAKGET------------PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK 168 + E+ S+ + + +P + R + ++ + L+ Sbjct: 121 TRFTAALAQNSSESEEEQSVTESSSGESSPQNTTWIIDFQPGIDILRCGNDPSLMFNELR 180 Query: 169 A-GEVDL-LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 GE+++ L + + D + L D + I V +V + I + Sbjct: 181 LLGELEVTLVDSTLPDFSDMDPEACYLNWQLALVTDKPLEQIKEVFEWVEDECTINYHQE 240 Query: 227 EVSPKISTPPVLKLAAEQAPTGRVE------REKTTRSNESTSIRVAVEKVDQLINLVGE 280 +P A + E ++ E SIRV++EK+D LIN+VGE Sbjct: 241 TDAPVKEQAEEAGTPANTEASPSTEVIAKPKAVTPAKTPEGGSIRVSIEKIDLLINMVGE 300 Query: 281 LVITQSMLAQRSSE--LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPR 338 LVITQ+ML Q + +D + + + QL + RDLQESVM IRM+P+ + F+R+PR Sbjct: 301 LVITQAMLGQIGQQDTIDEESLLSMKQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPR 360 Query: 339 LVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKN 398 LVRD+ +LGKQVEL L G TELDK+++E+I+DP+ HLVRNSLDHG+E PE R++ GK Sbjct: 361 LVRDIGQQLGKQVELILKGEDTELDKTVMEKIVDPMVHLVRNSLDHGLETPEVRVSKGKP 420 Query: 399 SVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAP 457 G++ L+A HQGGNI IE+ DDGAGL+ + I KA +GL E +S+D + LIF Sbjct: 421 EQGSITLNAFHQGGNIIIEIIDDGAGLDTQLIHKKAIDKGLVTEDEELSEDAIHQLIFKA 480 Query: 458 GFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSV 517 GFSTAE V+D+SGRGVGMDVV+RNI ++ G +E++S + G+ I LPLTLAILDG V Sbjct: 481 GFSTAEAVSDLSGRGVGMDVVRRNIHELNGTIELKSTKDKGSRFTIRLPLTLAILDGQLV 540 Query: 518 RVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 RV +++PL ++ ESLQ E ++ ++ ++ +R EYLP+V++++ F E Sbjct: 541 RVGQHTYVVPLVSIHESLQVEEQRINRISENHELVRLREEYLPVVKVFQEFGHDADFQEI 600 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 G+V+++ S + LLVD+L+ Q QVV+K+LE NY KVPG+S ATILGDG+VALI+D+ Sbjct: 601 RDGLVMVVDSNNEKIGLLVDELLSQQQVVIKSLEDNYSKVPGVSGATILGDGTVALIIDI 660 Query: 638 SALQAINREQRMANTAA 654 S L + M AA Sbjct: 661 SGLVTLAGIANMKEHAA 677 >UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Tax=Gammaproteobacteria RepID=A6W0H5_MARMS Length = 671 Score = 643 bits (1660), Expect = 0.0, Method: Composition-based stats. Identities = 272/670 (40%), Positives = 392/670 (58%), Gaps = 27/670 (4%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD +S + + FF+EA E L ME LL ++PD E+LN++FRAAHSIKGG+ FGF Sbjct: 1 MDNLSQYNEVFFEEAQEHLETMETLLLAYNIDSPDMEELNSVFRAAHSIKGGSDIFGFKA 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L TH+MEN+LD AR E+ L TD+I + LET D+++ L Y++ E D + Sbjct: 61 LTGLTHVMENMLDSARNNELTLTTDLITVLLETTDVLKNILSCYREEAEIDWDIIEASKA 120 Query: 122 ALRQLALEAKGETPSAVTRLSVV-----------------------AKSEPQDEQSRSQS 158 L E G + L + + D + Sbjct: 121 RLSATLQEVTGSNNQVHSPLDEEEDLGYGFFDDDDADTEEEQGFGFFEEDENDSEKDQGF 180 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 + + E D + + + + + L+ E A Sbjct: 181 GFFDEDDKEQEQEQDQDSKAIDEESLGYGFFEENNELAKEAESLTTEPQPDANTEHTENI 240 Query: 219 DQ--ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 E T L + + + E+TSIRV K+D+L+N Sbjct: 241 GYGFFNEEFNSPQKDAVTAQPAGLTSSTVAKPTPSSKASETKAEATSIRVETNKIDKLVN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LVGELVITQSML SE+ + +++ +L+RN R++QE+VMS+RM+P+ +VF+R+ Sbjct: 301 LVGELVITQSMLNLIGSEVPESIADKMQSALIELERNTREIQEAVMSVRMLPISFVFNRF 360 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PRLVRDL+ KL K++ L + G +TE+DK+L+E+I DPL HL+RNS+DHGIELP KRL A Sbjct: 361 PRLVRDLSTKLEKKINLVIEGGNTEIDKNLVEKISDPLLHLIRNSVDHGIELPAKRLEAN 420 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFA 456 K+ G ++LSA +GG I I +TDDGAGLNRERI+AKA +G+++ E +SD V LIF Sbjct: 421 KSETGIVMLSAAQKGGEIVITITDDGAGLNRERIIAKAVEKGISLPEPLSDSAVWQLIFE 480 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 GFSTA +VTDVSGRGVGMDVV+RNI+ +GG ++I S G GT I LPLTLAILDGM+ Sbjct: 481 AGFSTAAEVTDVSGRGVGMDVVRRNIESLGGRIDISSTAGMGTVFTINLPLTLAILDGMT 540 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V +D+VFI+PL ++ES+QP + + G+++L VR EY P++++ K + +T Sbjct: 541 VEASDQVFIIPLVNIVESIQPVAEQIKHIK-GKKLLWVRDEYWPLIDIGKTLGGSPNETN 599 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 GIVV++++ +R+ L++D L+GQ QVV+KNLE +YR+V GI+ ATI+GDGSVALI+D Sbjct: 600 METGIVVLVETSKQRFGLIIDSLLGQQQVVIKNLERHYRRVEGIAGATIMGDGSVALILD 659 Query: 637 VSALQAINRE 646 V ++ + Sbjct: 660 VDSITQFIKS 669 >UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G3I8_GEOUR Length = 707 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 307/701 (43%), Positives = 416/701 (59%), Gaps = 57/701 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D+S F Q FF+E+ E L +ME+ LL L P++P + L+AIFRAAHSIKG AG FGF+ Sbjct: 5 ISNDLSRFNQVFFEESAEHLTEMERILLELDPDSPQEDDLHAIFRAAHSIKGSAGIFGFT 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E+LLD R E+ L+ +I+ FLE D + QL ++ D + +C Sbjct: 65 DMMIVTHDLESLLDRVRNHELTLSRTMIDAFLEAGDAIAMQLAGHRDGSAVDLPIIEEVC 124 Query: 121 QALRQL------------------ALEAKGETPSAVTRLS-VVAKSEPQDEQSRSQSPRR 161 + L + + + PS V S +A E E + R Sbjct: 125 KKLEAFISGTSDAAVDAGSGLNLFSTLSDADAPSGVAAHSNSIAGYEIDFEPAEDTFKRG 184 Query: 162 IILSRLKAGEVDLLEEELGHLTTLTDVVKGAD------SLSAILPGDIAEDDITAVLCFV 215 + L L DL E ++ + D IL E+++ + FV Sbjct: 185 VRLENLFYELADLGELQVSAAIDFASPLSELDPENCYTRWHLILETAAGENELRDIFEFV 244 Query: 216 IEADQITFETVE-------------------------VSPKISTPPVLKLAAEQAPTGRV 250 E +++ + V+ + R Sbjct: 245 AEENELKIRVISETGTAKVSDSTAEPGQEHRGNGVMAVAEAGVPMNTQASVPGRRAYDRN 304 Query: 251 ERE------KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 E + + S E +SIRV V KVDQLIN VGELVITQSM++Q SELDPV ++ Sbjct: 305 ETDAGAYGRRAGESAEGSSIRVGVAKVDQLINQVGELVITQSMMSQIVSELDPVLFENIH 364 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + QL+RN RD+QES+MSIR++P+ VFSR+PRLVRDL+ KLGK VEL G +TELDK Sbjct: 365 RGLMQLERNTRDMQESIMSIRLVPISLVFSRFPRLVRDLSAKLGKLVELKTFGETTELDK 424 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 LIE+I DPLTHLVRN LDH IELP R A GK++ G + + A GG I I+V DDGAG Sbjct: 425 GLIEKIADPLTHLVRNCLDHAIELPHVRKAGGKDATGTITMRAAQVGGRIVIDVADDGAG 484 Query: 425 LNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 LNR++IL KA +GL V E M D+EV LIFAPGFSTA+ VTD+SGRGVGMDVV++N+ Sbjct: 485 LNRDKILKKALERGLDVDETMPDEEVWHLIFAPGFSTADTVTDISGRGVGMDVVQKNVHA 544 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 MGG +++ S+QG G I LPLTLAILDG+SV V E FI+PLN+++ESLQP D+ Sbjct: 545 MGGRIQVASEQGKGCKFTISLPLTLAILDGLSVAVGKEKFIIPLNSIVESLQPLADDIKM 604 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 ++ G RV+ VRGEYLP++ L++VFN+ T+ +GI+V++ + G R AL+VD+LIG+HQ Sbjct: 605 IS-GRRVVHVRGEYLPLLPLYEVFNLETPITKPEEGILVLIDAEGERGALMVDELIGEHQ 663 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 VV+K+LE+NYRKV G + ATILGDG VALI+DV L + + Sbjct: 664 VVIKSLENNYRKVEGTAGATILGDGRVALILDVGGLLQVGK 704 >UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9QB66_9VIBR Length = 727 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 274/712 (38%), Positives = 397/712 (55%), Gaps = 71/712 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPAQVDIEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E LD R + QL I+ L++ D+++ LD+ +Q + D + + Sbjct: 61 EISEFTHAVETYLDLIRTQKKQLTPQGIDTLLKSCDVIRNMLDSREQQTDIDNVLKEQVS 120 Query: 121 QALRQLALE-----AKGETPSAVTRLSVVAKSEPQDEQSR------------SQSPRRII 163 L+ L + + S + V + P E R P RI+ Sbjct: 121 AELQTLLADTSTVKVAIPSESVSACAAEVPQMTPAIEGWRIRFIPHQTLFYSGNDPLRIL 180 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCFVIEADQI 221 + G +E L L ++ LS L G+ +E +I + +V + + Sbjct: 181 REVRELGSQYQIEVHQQMLPELAEMDPELCYLSWNIDLTGNASESEIRELFDWVADECDL 240 Query: 222 TFETVE--------------------------VSPKISTPPVLKLAAE------------ 243 + + + + VL +A Sbjct: 241 EMTPLSGLATNQAESYEMGGETENLSLPSMPIAAEEHAQSTVLNDSAAHESSQMLPTAST 300 Query: 244 --------QAPTGRVEREKTTRSNES-TSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 AP+ + K + + S +SIRV +EKVD LINLVGELVITQSML + ++ Sbjct: 301 EVNSLPNPAAPSKKEAANKPAKMDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGND 360 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 L + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L Sbjct: 361 FSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQ 420 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK G + L A HQGG+I Sbjct: 421 IQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLQAFHQGGSI 480 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSE----NMSDDEVAMLIFAPGFSTAEQVTDVSG 470 +E+ DDGAG++ +++ KA +G+ +++D ++ LIFAPGFSTAEQV+D+SG Sbjct: 481 IVEIRDDGAGIDCDKLWRKAVEKGVLEPHTQRSDLTDKQIINLIFAPGFSTAEQVSDISG 540 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVKRNI+++GG +E++S+ G G+ I LPLTLAILDG V+VAD+V+++PL Sbjct: 541 RGVGMDVVKRNIEELGGQIEVESELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLT 600 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 ++ES+Q A + AGG + +R E +PI+ L + G + ++ ++S G Sbjct: 601 IVESIQINIASVKHAAGGIELYRLREENIPILRLQDELAM-GRSGGLEKRLLCFVESAGH 659 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 R LLVD L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+ L A Sbjct: 660 RVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIA 711 >UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteobacteria RepID=B9L827_NAUPA Length = 834 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 240/695 (34%), Positives = 373/695 (53%), Gaps = 51/695 (7%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD I + + F EA E++ +M+Q L+ L+ D + LN IFR AH+IKG F Sbjct: 1 MDEIQELLEDFLVEAFEMIEEMDQDLVELENSPDDLDLLNKIFRVAHTIKGSGSFLNFDK 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L TH ME +LD+AR+GE+ + +I+++ LE+ D M+ L+ + + + A D I Sbjct: 61 LTRLTHHMEAVLDKARKGELTITPEIMDVILESVDAMKGILEYIRDNGDDSAPDID-IEP 119 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDE------------QSRSQSPRRIILSRLKA 169 + +L G S+ + + + + E + ++ I L L Sbjct: 120 IVVRLDAIVNGSQASSKSAQTENTSEKNEGEKKPKIVGNINLDEITLENADEIDLDSLSP 179 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAE--------DDITAVLCFVIEADQI 221 E+D + E L L G +L I + E ++ AVL ++E Sbjct: 180 EELDAVLEHLVELRNKKPKKVGNINLDEITLENADEIDLDSLTPEEADAVLEHLVELRNK 239 Query: 222 TFETVEVSPKISTPPVLKLAAEQA--------------------PTGRVEREKTTRSNES 261 + E A Q + E +K S Sbjct: 240 PADKTENKQTEEKDEKKDNAQSQETKKEESKNELTPAKKQELTNEQKKKEVKKAISSVAE 299 Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQLQRNARD 316 +IRV V+++DQL+NL+GELV+ ++ L + ++++ G+ L + + D Sbjct: 300 QTIRVDVKRLDQLMNLIGELVLAKNRLIKIYNDVEERYEGEKFLEELNQVVSSISIVTTD 359 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQ +VM RM+P+ VF+++PRLVRDL+ +LGK+V L + G TELDKS+IE I DPL H Sbjct: 360 LQIAVMKTRMLPIGKVFNKFPRLVRDLSRELGKKVRLIIEGEDTELDKSIIEEIGDPLVH 419 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 ++RNS+DHGIE PE+R+ GK G + L A ++G I IE+ DDG G++ E + KA Sbjct: 420 MIRNSVDHGIEPPEERVKLGKPEEGTVWLRAYNEGNMIVIEIKDDGRGMDPEVLKRKAIE 479 Query: 437 QGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +G+ + NMSD E MLIF PGFSTA +VT VSGRGVGMDVVK NI+K+ G +E+ S Sbjct: 480 KGIITESEAANMSDKEAFMLIFKPGFSTAAKVTSVSGRGVGMDVVKTNIEKLNGIIEVDS 539 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G G+T ++ +PLTLAI+ + V +++F +PL+ V+E+++ E D++ + G+ VL+ Sbjct: 540 APGKGSTFKLKIPLTLAIIQALLVASQEDLFAVPLSNVIETVRIVEEDIYTIE-GKSVLK 598 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 +R E LP+V + +F + VVIL G + L+VD+ IGQ ++V+K+L Sbjct: 599 LREEVLPLVNMADIFEIEKVLEPEKYLYVVILGLGATKIGLIVDRFIGQEEIVIKSLGEF 658 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 + +PGI+ ATI GDG V LI+DV +L + +E Sbjct: 659 LKGIPGIAGATIRGDGRVTLIIDVGSLMRLAKETH 693 >UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Tax=Comamonadaceae RepID=D0IYI5_COMTE Length = 734 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 321/719 (44%), Positives = 421/719 (58%), Gaps = 76/719 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGFS + Sbjct: 15 FDLSQFYQIFFEEASENLDQMEQMLLSLDLSAANDEELNGIFRCAHSIKGGAATFGFSDV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E + S + Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQSGDEGEPVSTAELVVR 134 Query: 123 LRQLAL----------EAKGETPSAV------------------------TRLSVVAKSE 148 + LA A P V+ + Sbjct: 135 IEALAQGLTEIPQVNRSAAAAEPVQPVAVVAAVVADTPAQAPAPAAAQVAEPGPVIGTAP 194 Query: 149 PQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDI 208 P+ + + + L +L + G T V AD + +D++ Sbjct: 195 PEGARELTIEIGPLSRLELGDAIKELFRDIPGLGTIQDQVGTKADHRLFKVRTVSTDDEL 254 Query: 209 TAVLCFVIEADQITFETVE----------------VSPKISTPPVLKLAAEQ------AP 246 + F + +Q+ V + + PP A E AP Sbjct: 255 RDLFVFHVSKEQVQISDAAQPQNATEPVVEPLEVVVDEEAAMPPHNLPAEEAYGFFAGAP 314 Query: 247 TGRVEREKTTRS--------------------NESTSIRVAVEKVDQLINLVGELVITQS 286 ++ + ESTSIRV V+KVDQLINLVGELVITQ+ Sbjct: 315 GSPEAQQNQEHAVIGGAGSTVQKAAPKAAAAHMESTSIRVDVKKVDQLINLVGELVITQA 374 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 MLAQ S LDP + L+ + L RN RDLQESVMSIRM+PM VFSR+PR++RDLAGK Sbjct: 375 MLAQNSQGLDPTTYQQLLAGLADLDRNTRDLQESVMSIRMIPMSTVFSRFPRMLRDLAGK 434 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGK+++L +G +TELDK L+E+I DPLTHLVRNS+DHGIE+PE R+AAGK+ G L L+ Sbjct: 435 LGKKIDLVTLGEATELDKGLVEKITDPLTHLVRNSVDHGIEMPEDRIAAGKSEHGTLTLA 494 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVT 466 A HQGG+I IEV DDG G+NRERIL KA +G+ VS++M D +V LIFAPGFSTA+ VT Sbjct: 495 ASHQGGSIVIEVRDDGKGMNRERILNKARERGMDVSDSMPDSDVWQLIFAPGFSTADVVT 554 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 DVSGRGVGMDVVKRNI +GG VEI+S G G + + LPLTLAI+DGMSV V +EV+IL Sbjct: 555 DVSGRGVGMDVVKRNITSLGGTVEIESVAGVGMKVAVRLPLTLAIMDGMSVGVGEEVYIL 614 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL++V+ES Q + D++ +A G ++++VR EY+P++ L + F V A T I+V+++ Sbjct: 615 PLSSVVESFQVKADDVNTVANGTQLVKVRDEYMPVIALERTFQVPRADESQTSNIMVVVE 674 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + G R ALLVD+L+GQHQVVVKNLESNYRKVP +S ATILGDGSVALI+D AL R Sbjct: 675 AEGSRVALLVDELLGQHQVVVKNLESNYRKVPNVSGATILGDGSVALILDTGALVRRTR 733 >UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XIZ8_CALS8 Length = 664 Score = 636 bits (1640), Expect = 0.0, Method: Composition-based stats. Identities = 207/666 (31%), Positives = 371/666 (55%), Gaps = 32/666 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT G+ + Sbjct: 1 MDMSQYLGMFIEEAKDHIQSLNDNMLKLEENPEDLQLINEIFRSAHTLKGMAGTMGYVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+ TH MEN+L AR G++++N++I+++ +T D ++E LD + + + + Sbjct: 61 QKLTHAMENVLAAARDGKLRINSNIMDVLFKTVDALEEYLDVIVATGTEGSEQNLQLVNS 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS--------------PRRIILSRLK 168 L + + E + + + + + ++ ++ +L + Sbjct: 121 LNGILGRPQEEMVVSAKKATAQLEYDEFVIRAIERAYSQGFNVYKFDIELDPNCLLKSAR 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADS------LSAILPGDIAEDDITAVLCFVIEADQIT 222 A V EELG + V+ + S + + I + + E + Sbjct: 181 AYLVFKAVEELGEIINSKPPVQDIEDEKFDFGFSITIVSKEPLEKIRERILSISEIREAK 240 Query: 223 FETVEVSP------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 V+V + ++ + +A E+++ S ++RV +E++D L+N Sbjct: 241 GIEVKVGDVKVEGTQQEVGRTEEVQSTEAVKVVREQKQEGLQRTSKTVRVDIERLDVLMN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LV EL+I +S + + + + + + S+ L+R L ++VM +RM+P+E VFSR+ Sbjct: 301 LVSELIIIKSRIEGFAKKYNDRQYEE---SIEYLERITTSLHDAVMKVRMVPVERVFSRF 357 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR++RDLA +LGK+ EL + G TE+D+++++ + DPL HL+RN+ DHGIE PE+R+ G Sbjct: 358 PRMMRDLARELGKEFELVMSGEDTEVDRTIVDELGDPLIHLLRNAADHGIEEPEERVKNG 417 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--MSDDEVAMLI 454 K G + LSA H G N+ IEV DDG G++ E++ KA +GL + +S+ E+ + Sbjct: 418 KPRSGLIKLSAYHDGNNVVIEVEDDGKGIDIEKVKKKAIEKGLLKEDQLDLSEQEIIDFL 477 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F P FST ++VT++SGRGVG+DVVK I+++GG +E+++++G GT I LPLTLAI+ Sbjct: 478 FLPSFSTKDKVTNLSGRGVGLDVVKTKIEQLGGMIEVKTEKGKGTKFVIRLPLTLAIIQA 537 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + V V DE++ +P+ ++ E + D+ + G+ ++ +R + +PI L K+ + A Sbjct: 538 LLVTVKDEIYAIPIASIKEIIDVARDDIKVVQKGKEIIMLRNQVIPIKYLHKIVGLE-AD 596 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 + + VVI++ G + ++VD+L+GQ +V+K+L + +S ATILGDGSVA+I Sbjct: 597 LDKKKYTVVIVKRGEKLTGIVVDKLLGQQDIVIKSLGKYLEGIRLVSGATILGDGSVAMI 656 Query: 635 VDVSAL 640 +D + L Sbjct: 657 LDPNML 662 >UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH72 RepID=A1K5G3_AZOSB Length = 696 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 296/692 (42%), Positives = 401/692 (57%), Gaps = 46/692 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+S FYQ FF+EA E LA +E LL + PD E++ IFRAAHSIKG A TFGF Sbjct: 1 MAFDMSQFYQIFFEEAAEHLATIETVLLSIDAARPDPEKVAEIFRAAHSIKGSAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH ME+LLD+ RRG L ++ L D + L A++ D A+ + Sbjct: 61 DLTGLTHEMESLLDDVRRGRRPLTQAMVQACLAAGDALHGLLAAHRGEGVADRAAAEAAR 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKS--------------------------------- 147 Q L QL + + V + Sbjct: 121 QRLLQLKDAPDHDAAVTDPPAAAVPDATEWPLYRVRFVVARFLAGSDLLFGSMLEDLAAL 180 Query: 148 -EPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS---------LSA 197 + + + +P + VD L L V A+ L Sbjct: 181 GDYELLEPDPAAPGTRCIRICSGESVDALRAAFERLAEPGSVEITAEQMAAANAAPALPE 240 Query: 198 ILPGDIAEDDITAVLCFVIEADQ---ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 P +A A+ + + ET+ +P + P ++A + Sbjct: 241 PQPPAVAAAGDEALFDVADDGSYGFFVPLETLPAAPFGTDDPPAAAVPDEADAQPAATAR 300 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNA 314 + +SIRV VE+VD++++LVGELVITQSML ++ + P L+ + LQR+ Sbjct: 301 ELPRSADSSIRVGVERVDRMMDLVGELVITQSMLLDAAAAIGPAAGERLLAGLALLQRHT 360 Query: 315 RDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL 374 RDLQ+SVM+IRM+P+ VFSR+PRLV DL +L KQ++L L G TELDK L+E++ DPL Sbjct: 361 RDLQQSVMAIRMVPVSMVFSRFPRLVHDLGMRLDKQIDLVLEGEHTELDKGLVEKLADPL 420 Query: 375 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 THLVRN +DHGIE E+R AAGK G L L+A H GG++ IEV DDGAGL+RER++A+A Sbjct: 421 THLVRNCIDHGIEPAERRRAAGKPEAGRLRLAASHLGGHVLIEVEDDGAGLDRERLIARA 480 Query: 435 ASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +QGL SE+MSD+E LIF PGFSTAEQVTD+SGRGVGMDVV+RNI +GG V+I S+ Sbjct: 481 RAQGLPCSEDMSDEEAWQLIFLPGFSTAEQVTDLSGRGVGMDVVRRNIAALGGRVDIVSR 540 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G GT + +PLTLAIL+GM V V DEVFILPL+A++ESLQP A + + G R++ V Sbjct: 541 AGRGTRFSVSVPLTLAILEGMQVAVGDEVFILPLDAIVESLQPERASVRSIGGAPRLIAV 600 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RGEY P+VEL F V A + T+GI+V+++ G R AL VD L+GQ QVV+K LE+++ Sbjct: 601 RGEYWPVVELGHFFAVPEAGRDWTRGIMVLVERNGSRAALFVDGLVGQQQVVIKPLETHF 660 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINRE 646 R+VPG+S+AT+LGDG VALI+DV+AL R+ Sbjct: 661 RRVPGVSSATLLGDGRVALILDVAALIGTARD 692 >UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 Tax=Clostridia RepID=B9MM01_ANATD Length = 666 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 208/668 (31%), Positives = 366/668 (54%), Gaps = 34/668 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT GF + Sbjct: 1 MDMSQYLGMFIEEARDHIQSLNDNMLKLEENPEDLQIVNEIFRSAHTLKGMAGTMGFVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+ TH MEN+L AR G++++N +I+++ +T D ++ LD + + ++ A Sbjct: 61 QKLTHAMENVLAAARDGKLKVNPNIMDILFKTVDALESYLDVIIATGTEGQETNLHLVNA 120 Query: 123 LRQLALEAKGETPSAVTRLS------------VVAKSEPQDEQS---RSQSPRRIILSRL 167 L + + + + + + ++ Q + + +L Sbjct: 121 LNAILGKPAEDVAVSSATKAGKKYEYDEFVVRAIERAWDQGFNVYRFDVELDQNCLLKSA 180 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGAD------SLSAILPGDIAEDDITAVLCFVIEADQI 221 +A V EELG + V+ + S + + I + + E ++ Sbjct: 181 RAYLVFRAVEELGEIIHSKPSVQDIEDEKFDFEFSITVISKQPIEKIRDRILSISEIREV 240 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE-------STSIRVAVEKVDQL 274 ++ ++ Q T E K R + S ++RV +E++D L Sbjct: 241 KALEIKSGEVSMAEEKEEIEEVQQETQVQETVKVVRQQKQESLQKTSKTVRVDIERLDVL 300 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 +NLV EL+I +S + + + + + + S+ L+R L ++VM +RM+P+E VFS Sbjct: 301 MNLVSELIIIKSRIEGLAKKYNDRQYEE---SIEYLERITTSLHDAVMKVRMVPVERVFS 357 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+PR++RDLA +LGK+ EL + G TE+D+++++ + DPL HL+RN+ DHGIE P++R+ Sbjct: 358 RFPRMMRDLARELGKEFELVMSGEDTEVDRTIVDELGDPLIHLLRNAADHGIEDPDERVK 417 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--MSDDEVAM 452 GK G + LSA H G N+ IEV DDG G++ E++ KA +GL + +++ E+ Sbjct: 418 NGKPRSGLIKLSAYHDGNNVVIEVEDDGKGIDLEKVKQKAIEKGLLKEDQIELTEQEIID 477 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 +F P FST ++VT++SGRGVG+DVVK I+++GG VE+++++G GT I LPLTLAI+ Sbjct: 478 FLFMPSFSTKDKVTNLSGRGVGLDVVKTKIEQLGGMVEVKTQKGKGTKFVIRLPLTLAII 537 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 + V V DE++ +P+ ++ E + + D+ + G+ ++ +R + +PI L + + Sbjct: 538 QALLVTVHDEIYAIPVASIREIVDVAKEDIKVVQKGKEIIMLRNQVIPIKHLHSIVGLEP 597 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 + + VVI++ G + ++VD+L+GQ +V+K+L V IS ATILGDGSVA Sbjct: 598 VL-DKKKFTVVIVRRGEKLTGIIVDKLLGQQDIVIKSLGKYLEGVRLISGATILGDGSVA 656 Query: 633 LIVDVSAL 640 +I+D + L Sbjct: 657 MILDPNML 664 >UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor kinase CheA n=11 Tax=Firmicutes RepID=C4Z5I4_EUBE2 Length = 711 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 216/708 (30%), Positives = 360/708 (50%), Gaps = 68/708 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + MD+S + + F DE++E L ++ +++L+ E +++ +N IFRAAHS+KG AGT G+ Sbjct: 5 LKMDVSQYLEIFIDESNEHLQNLSDGIMILEKEPDNSDTINEIFRAAHSLKGMAGTMGYK 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +Q TH MEN+ E R G +++++ ++++ + D +++ ++ +++ + + I Sbjct: 65 RMQNLTHDMENVFSEVRNGNIKVDSRMVDVLFQCLDALEQYVNNIQETSDEGTDDNEPII 124 Query: 121 QALRQLAL--EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 +AL + E KG P + V A+ + ++ + + A E Sbjct: 125 KALNSFIVNNEDKGILPEEAKKEDVPAEEKKEENVEAGDGSYAKYNNMVFADFEKNAVNE 184 Query: 179 LGHLTTLTDVVKGADSLSAILPG------------------------DIAEDDITAVLCF 214 V+K + + IL DI ++ Sbjct: 185 ALEKKMNVFVIKVSVDENCILKAARAFLVFKNLEGHCDIIKSEPSAQDIEDEKFELDFSI 244 Query: 215 VIEADQITFETVEVSPKISTPPVLKLAAEQAPTG-------------------------- 248 V+ ++ + + +S A P Sbjct: 245 VVVTEESYESIIGIIKNVSEIKDAAGEAITTPFAEDDEKEEVKEEPKHEENKNQSETKPA 304 Query: 249 ----------RVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 + S ++RV +EK+D L+NLV EL+I ++ L S D Sbjct: 305 AASATAKKQTPAANNNKSGKTVSHTVRVDIEKLDVLMNLVSELIIAKNGLVSASVTEDGT 364 Query: 299 NH--GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 + L+R +L ESVM +RMMP+E VF++YPR++RDL KLGK++EL + Sbjct: 365 TSVNQKFGEQIEYLERVTTNLHESVMKVRMMPIESVFAKYPRMIRDLNKKLGKKMELYMS 424 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TELD+++I+ I DP+ HL+RNS DHG+E E R GK VG++ L A +G N+ I Sbjct: 425 GEETELDRTVIDEIGDPIMHLLRNSADHGLESAEVRAERGKPEVGSIWLDAYQEGNNVVI 484 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 EV DDG G++ E++ KA +G E +++ E L+F P FST+++VTDVSGRGV Sbjct: 485 EVRDDGNGIDVEKVKQKAVEKGNLTQEQADVLTEKEAIDLLFKPSFSTSDKVTDVSGRGV 544 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 G+DVVK I+ +GG VE+++ G G+T I LPLTLAI+ + V+V +E + + L ++ Sbjct: 545 GLDVVKSKIEALGGDVEVKTTYGEGSTFSIRLPLTLAIIQALMVKVGEEKYAIALGSIET 604 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 +++ + E V+ +RG +P++ L ++ +V G E+ ++VI++ G + Sbjct: 605 IEDVPVSEIKYVHAKE-VINLRGNVIPLIRLRELLDVPGEPEESDNIVIVIVRKGDKLAG 663 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 L+VD LIGQ ++V+K+L IS ATILGDGSVALI+D + L Sbjct: 664 LVVDNLIGQMEIVIKSLGKYININRMISGATILGDGSVALIIDANTLV 711 >UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=Bacteria RepID=A6Q2K9_NITSB Length = 673 Score = 631 bits (1627), Expect = e-179, Method: Composition-based stats. Identities = 224/667 (33%), Positives = 371/667 (55%), Gaps = 25/667 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S D+ + F EA+E++ +++Q L+ L+ + + + LN IFR H++KGGAG G Sbjct: 6 SEDMQEILDEFVQEAEEIIENLDQELIELESDPTNRDLLNEIFRGMHTLKGGAGFLGLES 65 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE-PDAASFDYIC 120 + E H++E++ D+ R EM L +D++++ LE D+++ ++ K E PD + Sbjct: 66 IIELAHVIESIFDKLRNNEMTLTSDMMDVILEGIDVLKSAIETLKSENEIPDVDEIKPLL 125 Query: 121 QALRQLALEAK---GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 L + + + + ++S V + EP + + S + I + +VD + Sbjct: 126 DKLNHILENPESFQADKSARSEQISEVTEQEPSEAEQESSNNNSIKEEIIFHDDVDEKIQ 185 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDI---TAVLCFVIEADQITFETVEVSPKIST 234 +L + + D L + P + D I ++ + + + E + P++ Sbjct: 186 QLIREHPGKNFKEILDDLILLPPEERDMDLIMKLDELINEGKDVEDLIKERRIIEPEVKE 245 Query: 235 PP-VLKLAAEQAPTGRVEREKT-----TRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 V E+AP E+ KT + E+ +IR+ +E+V L+NLVGELV+ ++ + Sbjct: 246 ESSVSSKQEEKAPVTVPEKSKTVPKPKQKKEETETIRIDIERVSTLMNLVGELVLDRNRI 305 Query: 289 AQ-----RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 + RS+ D +L ++ + R+ DLQE VM +RM P++ +FS++PR+VRDL Sbjct: 306 VKLTSRLRSNCEDSEAIEELNEAIAGMSRSVSDLQEVVMKLRMQPVKRIFSKFPRIVRDL 365 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A K+GK++EL L G TE+D+S++ ++ DPL HLVRNS+DHGIE PE+RLA GK G++ Sbjct: 366 AKKMGKKIELILEGEDTEIDRSILNQLEDPLIHLVRNSIDHGIETPEERLAKGKPETGHI 425 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFS 460 ILSA +G I + + DDG G+N E++ KA +GL E MSD E LIF PGFS Sbjct: 426 ILSALQEGDRIIVSIEDDGRGINAEKVKQKAIEKGLITPEQAAQMSDKEAYELIFMPGFS 485 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 T ++V+++SGRGVGMDVV I + G +EI+S+ GT I + LPLT+AI+ + V Sbjct: 486 TVDEVSEISGRGVGMDVVSNVIHSLRGAIEIESEPDKGTKITMKLPLTVAIIRTLMVGTN 545 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 + +F +PL +V+E ++ D+ + G + L +R E L ++F++ E Sbjct: 546 NRIFAIPLFSVVEIIKYNPEDIKDV-GTYKSLVLRDEVYLFFHLNELFDLESNHKE---K 601 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++IL G + A+ VD L G+ ++V+K L + V GI+ ATI GDG V LI+D+ +L Sbjct: 602 FIIILNIGEKNIAIAVDDLFGEEEIVIKPLGEMLKDVQGIAGATITGDGKVVLILDIKSL 661 Query: 641 QAINREQ 647 R + Sbjct: 662 INDKRNE 668 >UniRef50_Q0AYL2 Putative CheA signal transduction histidine kinases n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYL2_SYNWW Length = 677 Score = 629 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 216/681 (31%), Positives = 355/681 (52%), Gaps = 44/681 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M MD+S + F +E+ E L + Q LL + + D LN IFRAAH++KG + T GF Sbjct: 1 MKMDMSQYLDVFLEESKEHLESLNQKLLDWEKNSGDIAALNEIFRAAHTLKGMSSTMGFE 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ--SQEPDAASFDY 118 L + TH MEN+L + + G +++ ++++ + D +Q ++ + S E D + Sbjct: 61 DLADLTHHMENILSDLKEGLLEVTPQVVDILFQCFDRLQLIIERIESNGSGEMDNSELIM 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I ++++ + L Q + S + ++ ++ Sbjct: 121 ILESIKGGGFQTTAPAADNGQDLKPEEILTTQHSNTTSFDFNQYDMTVMREAASRNFASI 180 Query: 179 --------------------LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF--VI 216 L ++++K S I G +E+ V+ + Sbjct: 181 YIRLFVDPGCLMKSVRAFMVFKVLEEDSEIIKSFPPASDIEEGKFSEEIELLVITASSIK 240 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGR------------VEREKTTRSNESTSI 264 E + E+ + A + E ++ ++ Sbjct: 241 ELEGRLNAISEIKVREIKEINFASLASGSQQETNGDQISSSQDVLKESKEQKGHKVKQTV 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +E++D L+NLVGELV+ + L Q + +L ++ Q+ R + DLQ VM + Sbjct: 301 RVDIERLDILMNLVGELVMHKGRLEQIGA---SSKIDELNETIEQIDRISGDLQSVVMKV 357 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+E VF+R+PR+VRDLA +L K+V+ + G TELD+++I+ I DPL HL+RN++DH Sbjct: 358 RMVPVEQVFNRFPRMVRDLAKELNKEVDFLIEGKETELDRTVIDEIGDPLVHLLRNAVDH 417 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV--- 441 G+E P++RL GK +IL A H+G N+ IEV DDGAG+N +R L KA +G+ Sbjct: 418 GVESPQERLKRGKPQKATVILRARHEGNNVYIEVEDDGAGINIKRTLEKAVEKGIISAKE 477 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 +E +S +E + ++F+PGFST E +TDVSGRGVG+DVVK I+ + G + + S+ G GT Sbjct: 478 AEVISPEEASQILFSPGFSTTENITDVSGRGVGLDVVKTKIESLSGEIFVDSRPGQGTRF 537 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 RI LPLTLAI+ + + V DE++ +PL +V E+ + D+ + + V+ +RG LP+ Sbjct: 538 RIKLPLTLAIIQALMISVHDEIYAIPLGSVDETTMIKNEDIKMVQN-QEVIVLRGNVLPL 596 Query: 562 VELWKVFNVAG-AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 L + + G A + VVI++ G R+ L+VD LIGQ ++V+K+L +PGI Sbjct: 597 FRLASLLEIPGEAAANEEEMYVVIVRKGERQIGLVVDTLIGQQEIVIKSLGKILAGIPGI 656 Query: 621 SAATILGDGSVALIVDVSALQ 641 + A + GDG V LI+D++ L Sbjct: 657 AGAIVAGDGFVRLIIDIATLF 677 >UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07SD9_RHOP5 Length = 713 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 276/689 (40%), Positives = 397/689 (57%), Gaps = 39/689 (5%) Query: 1 MSMD-----ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 MS D ++ F +T+F+E ELL ++ +L +L D E L+A+FR+ HSIKGGAG Sbjct: 3 MSEDSESYPLAQFRKTYFEECAELLDALQSNLDLLSNGGGDGETLHAVFRSVHSIKGGAG 62 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 FGF+ L +H+ E+LLD R ++ ++I L L D + + + A + Q A Sbjct: 63 AFGFASLVAFSHVFESLLDAVRDNKIATEPEVIQLLLRASDALGDIVSAARADQPIAADF 122 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL-------- 167 I A+ + + A +A R E Q R + Sbjct: 123 GCEIVAAMEDMLVGASEPMQAAPERKPAATAEEMQVSGERRYRIEFRPHREMFQKGNEPL 182 Query: 168 ---------KAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 VD+ L L ++ D S L + + V FV + Sbjct: 183 LLLRQLRRLGGLAVDVDASRLPPLASI-DPEGAYLSWVLTLDTGAPQTAVHEVFEFVEDD 241 Query: 219 DQITFETVE--------------VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 ++ VE I+ P++ A + +T + SI Sbjct: 242 CELKITPVEGAAADAAPAAAAALEPAAIAAAPLVLAPVVAATPAKPADPQTAPPAVTQSI 301 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV V+KVD+L+NLVGELVITQ+ML ++ S L ++ LI + L ++AR+LQESVM+I Sbjct: 302 RVDVDKVDRLVNLVGELVITQAMLTEQGSLLPNDHYPTLIQGIEALAQSARELQESVMAI 361 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 R P++ VF+R PR+VRDLA LGK+V + G TE+DK++IE++ DPLTH++RN+LDH Sbjct: 362 RAQPVKSVFARMPRVVRDLAATLGKEVRIVTSGEMTEIDKTVIEQLNDPLTHMIRNALDH 421 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-E 443 GIE PE R+AAGK G + LSA H+ G I IEV DDG GLNRE++LAKA +GL Sbjct: 422 GIEAPEARVAAGKPRQGTIHLSAAHRSGRIVIEVADDGRGLNREKVLAKAQERGLVPPGA 481 Query: 444 NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 ++SD+E+ LIF P FSTA+ V+++SGRGVGMDVVKRN+Q +GG + +QS+ G G+ + Sbjct: 482 SLSDEEIDGLIFLPAFSTADVVSNISGRGVGMDVVKRNVQSLGGRITVQSRPGAGSRFTL 541 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLA++DGM V V E FI+PL A++ESL+P+ AD+HPL G +L +RGEYLP++ Sbjct: 542 SLPLTLAVVDGMVVSVGRETFIIPLTAIIESLRPQPADIHPLVGRGELLALRGEYLPLIH 601 Query: 564 LWKVFNVAGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L + F +AGA + +GIV+++QS ++VD+L+GQ QVVVK+LE+NY V GIS Sbjct: 602 LHRCFAIAGAVADPCRGIVIVVQSETAGCVGVVVDELLGQQQVVVKSLEANYDPVDGISG 661 Query: 623 ATILGDGSVALIVDVSALQAINREQRMAN 651 ATILG+G VALI+D++ L + A Sbjct: 662 ATILGNGKVALILDIARLPETHGHGDAAR 690 >UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 Tax=Moorella group RepID=Q2RKH9_MOOTA Length = 685 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 223/686 (32%), Positives = 353/686 (51%), Gaps = 33/686 (4%) Query: 1 MS-MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS +D+S + F DEA+E L +++ ++ L+ D E LN IFRAAH++KG + + GF Sbjct: 1 MSDLDMSQYLGIFLDEAEEQLQQLDEAVVQLEQTPDDQELLNTIFRAAHTLKGSSASMGF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + L TH ME++LD R+G++ ++ +II++ L + D ++ D+ + + + + Sbjct: 61 NRLATLTHRMESVLDSLRQGKLAVSREIIDILLASVDTLRALKDSIAAGKGEEGDVNEVV 120 Query: 120 CQALRQLALEAKGETPSAVTRLS---------VVAKSEPQDEQSRSQSPRRIILSRLKAG 170 + LA A AV V+ +E + ++ + ++K+ Sbjct: 121 ARLEAVLAGPAAPVANKAVANAELTLDDIEQNVIRAAEVKGFRAYEIRVQLEAGCQMKSA 180 Query: 171 EVDLLEEELGHLT---------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 L+ L L + K D+ + D + V+ V E + Sbjct: 181 RAYLVFNNLKELGEIIKSVPHTQDLEAEKFDDTFTLAFVSREDADTLANVVKSVSEIKDV 240 Query: 222 TFETVEVSPKISTPPVLKLAA-----EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + + A E A + + ++RV V++++ L+N Sbjct: 241 LVRPIVLEEDQPAAARAGTAPGKPGVEAAGGKNGTTAPAGEHHVNQTVRVDVQRLENLMN 300 Query: 277 LVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 LVGELVI ++ L + + L L + R DLQE +M RM P++ Sbjct: 301 LVGELVIDRTRLTEVGNGLKNRLGNEELLETLEEVSLHIGRITSDLQEEIMKARMFPIDQ 360 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 VF+R+PR+VRDLA K GK+++ + G TELD+++IE I DPL HL+RN++DHGIE PE Sbjct: 361 VFNRFPRMVRDLARKAGKEIDFIIEGRETELDRTVIEEIGDPLIHLLRNAIDHGIEEPEV 420 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDD 448 RL GK G + L A HQ I I V DDGAG++ E+I AKA ++GL E +S Sbjct: 421 RLRQGKPRHGTVRLKAFHQENQIVITVEDDGAGMDAEKIKAKAIARGLISPESAARLSRR 480 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 E LIF PG ST+++VTDVSGRGVGMD+V+ +I+K+ G ++I++ G GT I LPLT Sbjct: 481 EALDLIFLPGLSTSDKVTDVSGRGVGMDIVRNHIEKINGTIDIRTTPGKGTCFTIKLPLT 540 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAI + V V V+ PL V+E + + + + V+ LP++ L + Sbjct: 541 LAINRSLLVHVDGRVYAFPLANVVEIIDVTPDSIQHVHRQQVVVVRG-RVLPLIYLGQAL 599 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 + A VVI+ ++ +VD LIG+ ++V+K+L + K+PGI+ ATI+GD Sbjct: 600 GLGTPIPAADTYAVVIVGLAEKQVGFIVDDLIGEQEIVIKSLGNFIGKIPGIAGATIMGD 659 Query: 629 GSVALIVDVSALQAINREQRMANTAA 654 GSVALI+DV +L E+ A+ Sbjct: 660 GSVALILDVRSLMNFVGEEADRELAS 685 >UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Moritella sp. PE36 RepID=A6F9B4_9GAMM Length = 682 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 260/683 (38%), Positives = 393/683 (57%), Gaps = 30/683 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+ F+Q F +E E L ME LL L P + D+E +N IFR AHSIKGGAGTFGF Sbjct: 1 MDIDLKQFHQVFIEECLEGLEVMEAELLKLNPGSVDSEVINTIFRVAHSIKGGAGTFGFH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+ E LLD+ R ++ L INLFL+T D ++ + E + + + Sbjct: 61 QLTAFTHVAETLLDDLRAEKLTLIDGHINLFLQTVDCLRAWIQLLADDSESIPDAAESLK 120 Query: 121 QALRQL-------ALEAKGETPSAVTRL--------SVVAKSEPQDEQSRSQSPRRIILS 165 Q Q L + G+ P A + ++ QD + PR I Sbjct: 121 QQYNQFLQLDVNQDLSSTGDEPLAKPPVMKGLDDGDWLIHFVPGQDILKQGNEPRLIFAE 180 Query: 166 RLKAGEVDLLE--EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ--- 220 GE+ ++ + + L+ + L ++E I +V + Sbjct: 181 LQDMGELKVMPKFDNIPSWNNLSP-EDIYVTWDLELISQVSEAQIKEAFEWVEDESTIII 239 Query: 221 --ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLV 278 + T ++ + LA + + T+S E+ SIRV+++KVD LIN+V Sbjct: 240 TTPSTRTQSIASETLATDNKMLAESKPSPVTTNKITKTKSPETNSIRVSIDKVDALINMV 299 Query: 279 GELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPR 338 GELVITQ+ML + + +L + QL ++ R++Q+SVM IRM+P+++ F+R PR Sbjct: 300 GELVITQAMLEELGQDFSVEKLPELKKGLTQLSQHTREMQDSVMKIRMLPIQFAFNRIPR 359 Query: 339 LVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKN 398 +VRDL+ +LGK V L + G TELDK ++E++ DP+ HLVRN+LDHGIE E+R AGK+ Sbjct: 360 MVRDLSAQLGKNVVLRIHGEETELDKIMLEKLSDPIVHLVRNALDHGIETIEERKLAGKS 419 Query: 399 SVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAP 457 V L ++A HQGG I +E+ DDG GLNR++I AKA +G+ + SD+++ IF+P Sbjct: 420 DVAYLDINAFHQGGEIIVEIRDDGRGLNRDKIHAKAIEKGIANKDQRYSDNQIDEFIFSP 479 Query: 458 GFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSV 517 GFST E V+D+SGRGVGMDVVKRNI+ +GG ++I+S G G+ I LPLTL+I+DG V Sbjct: 480 GFSTVETVSDISGRGVGMDVVKRNIESLGGDIKIESTTGEGSCFSIRLPLTLSIMDGQLV 539 Query: 518 RVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 ++ + +ILP+ +++ESLQ ++ + LA V ++R E++ I+ L+KV N Sbjct: 540 KIGSKTYILPIMSIIESLQLKDGMVTKLADDTEVFKLRDEFISIIRLYKVLNHKTNLKCI 599 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 T G++V+++ G ++Y LLVD L Q QVV+KNLE N+ KV +S ATILG+G+VALI+D+ Sbjct: 600 TDGLLVVVECGNQKYGLLVDDLAAQQQVVIKNLEENFMKVSCVSGATILGNGTVALILDI 659 Query: 638 SALQ------AINREQRMANTAA 654 + + ++ A+ AA Sbjct: 660 ADIVKRVTNERHQQQGPRAHVAA 682 >UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pseudomallei RepID=A3NFT9_BURP6 Length = 758 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 299/741 (40%), Positives = 398/741 (53%), Gaps = 90/741 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D++ F + FF+EA+E L ME LL PDAE LN IFRAAHSIKGGAG FGF+ Sbjct: 17 MSIDLTQFSEVFFEEAEEHLRAMETLLLACDVSHPDAEDLNGIFRAAHSIKGGAGAFGFA 76 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL------------------ 102 L TH++E LLD R+ E+ L +++ FL D++ L Sbjct: 77 ELTGVTHVLETLLDRIRKRELPLRAAMVDAFLRATDLLAVMLAAYRSGEALPEQSIEATK 136 Query: 103 ---------------DAYKQSQEPDAASFDYICQA--LRQLALEAKGETPSAVTRLSV-- 143 DA EP AS ++ A L ++ +A +T AV Sbjct: 137 RSLERLSQGEGAYGADAVMPDAEPVPASSEHDGDAHPLPEVLGDAYRKTSPAVMPPPGCL 196 Query: 144 ---VAKSEPQDEQS-------------------------------RSQSPRRIILSRLKA 169 +A P D++ + + + Sbjct: 197 HVRIAAGAPIDDEGVMSCLASYGRVIEHYPGGCDQPWRYLCETSRDAADIHGTLTFLIDP 256 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 + + + + + D +P D A + S Sbjct: 257 DRLTIDQAAPEGGELPPEWEEEHDGYGFFVPVPTIGDGDAAHEAEARDEAGHARAETGRS 316 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNES-----------------TSIRVAVEKVD 272 + + A + RS ++ +SIRV+VEKVD Sbjct: 317 DAQANASAGGSSVASAGVPALASPSPPRSRQAGDAAGGDSMAKRNGAGGSSIRVSVEKVD 376 Query: 273 QLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYV 332 QL+NLVGELVITQSMLAQ + ELD L+ +GQL+RN+R+LQE+VMSIRM+P+ V Sbjct: 377 QLLNLVGELVITQSMLAQAAIELDANQRERLVGGIGQLERNSRELQEAVMSIRMLPISAV 436 Query: 333 FSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR 392 F+R+PR+VRDLA +LGKQVEL ++G TELDK IE++ DP+ HLVRNS+DHGIE P+ R Sbjct: 437 FNRFPRVVRDLAMQLGKQVELQMIGEHTELDKGFIEKLADPMMHLVRNSVDHGIEAPQAR 496 Query: 393 LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAM 452 + GK + G L L A QG +I IEV DDG GL RERIL KA GL VSE+M+D EV M Sbjct: 497 VRRGKPATGRLTLRASQQGSDIAIEVIDDGGGLQRERILEKARESGLPVSESMTDREVWM 556 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 LIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I I LPLTLAIL Sbjct: 557 LIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAISIKLPLTLAIL 616 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 DGMSVR+ +I+PL + E++ P + D+ + RV+ VRGEYLP+ L +F Sbjct: 617 DGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQRSGRVVNVRGEYLPLRSLADLFETGE 676 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 T+ + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + ATI+GDG VA Sbjct: 677 DTTDG--SLALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAAGATIMGDGRVA 734 Query: 633 LIVDVSALQAINREQRMANTA 653 LI+DV +L R + A Sbjct: 735 LILDVMSLVMSARNSANVSEA 755 >UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium RepID=A5EDT5_BRASB Length = 684 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 269/656 (41%), Positives = 394/656 (60%), Gaps = 25/656 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +T+F+E ELL ++ +L +L D E L+AIFR+ HSIKGGAG FG + L Sbjct: 12 VAQFRKTYFEECAELLDALQSNLELLSSGQEDDETLHAIFRSVHSIKGGAGAFGCTDLVA 71 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H E+LLD R ++ + DI L L D + + ++A + Q+ + I A++ Sbjct: 72 FSHTFESLLDALRDHKIAVTNDIKQLLLRASDALADIVNAARLEQQLAPSFAVDIRTAMQ 131 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + A + ++P EQ+ R KA E LL +L L Sbjct: 132 HVLQGAGPAA--EPGPAPAASDAKPLHEQTYRIRFRPHTEMLKKANEPLLLIRQLRKLGA 189 Query: 185 LT--------------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 L D + + L + I V FV + + E +E + Sbjct: 190 LAIDVDCSALPALGALDPEAAYFNWTFTLETAVPRSGIQDVFEFVEDDCDLQIELLESA- 248 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 + G + + SIRV V+KVD+L+NLVGELVI+Q+ML + Sbjct: 249 ------TAAVEVAPGDAGSAAAPVVAAVSLAQSIRVDVDKVDRLVNLVGELVISQAMLTE 302 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + L + LI + L ++AR+LQESVM+IR P++ VF+R PR+VR+LA LGK+ Sbjct: 303 QGLALPADKYPQLIQGIEALAQSARELQESVMAIRAQPVKSVFARMPRIVRELAAVLGKE 362 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V + G TE+DK++IE++ DPLTH++RN+LDHGIE P +RLAAGK G + LSA + Sbjct: 363 VRIVTSGEMTEIDKTVIEQLNDPLTHMIRNALDHGIEPPAERLAAGKPRQGTINLSAAQR 422 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVS 469 G I IEV+DDG G+NR+++LAKA ++GL + N+SDD++ LIF P FSTAE ++++S Sbjct: 423 SGRIVIEVSDDGRGINRDKVLAKARARGLVPAGANLSDDDIDNLIFLPAFSTAEVISNIS 482 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVVKRN+Q +GG + ++S+ G G++ + LPLTLA++DGM V V E FI+PL Sbjct: 483 GRGVGMDVVKRNVQALGGRISVRSRFGHGSSFTLSLPLTLAVVDGMVVSVGRETFIIPLV 542 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 A++E+L+P AD+HP+ G VL +RGEYLP+V L +VF++ A + +GIV+I+QS Sbjct: 543 AIVENLRPLPADIHPVVGRGHVLALRGEYLPLVYLHRVFSIGDAIGDPCRGIVIIVQSES 602 Query: 590 -RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 R ++VD+L+GQ QVVVK+LE+NY V GIS ATILG+G VALI+DV+ L I+ Sbjct: 603 AGRVGIVVDELLGQQQVVVKSLEANYEPVDGISGATILGNGRVALILDVARLHEID 658 >UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepID=CHEA_BACSU Length = 672 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 224/675 (33%), Positives = 376/675 (55%), Gaps = 40/675 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + F DE+ E L + LL+L+ + D + ++ IFRAAH++KG + T G++ L Sbjct: 1 MDMNQYLDVFIDESKEHLQTCNEKLLLLEKDPTDLQLVHDIFRAAHTLKGMSATMGYTDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE------PDAASF 116 THL+EN+LD R G+M++ +D +++ E D ++ + + + +A Sbjct: 61 AHLTHLLENVLDAIRNGDMEVTSDWLDILFEALDHLETMVQSIIDGGDGKRDISEVSAKL 120 Query: 117 DYICQALRQLALEAKGETPSAVTRLS-------VVAKSEPQDEQSRSQSPRRIILSRLKA 169 D A E S+ + V+ ++E Q + LKA Sbjct: 121 DVNGAHAESAASAEPAEAQSSASDWEYDEFERTVIQEAEEQGFKRYEIKISLNENCMLKA 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEADQ 220 V ++ E+L + + + A+ L + +DI ++ V E + Sbjct: 181 VRVYMVFEKLNEVGEVAKTIPSAEVLETEDFGTDFQVCFLTHQSAEDIEQLINGVSEIEH 240 Query: 221 ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE-----------STSIRVAVE 269 + P K A ++EK + + S +IRV ++ Sbjct: 241 VEVIQGAPLTSAEKPEESKQEDSPAAAVPAKQEKQKQPAKNDEQAKHSAGGSKTIRVNID 300 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 ++D L+NL ELVI + L Q + EL+ H +L ++ ++ R + DLQ ++++RM+P+ Sbjct: 301 RLDSLMNLFEELVIDRGRLEQIAKELE---HNELTETVERMTRISGDLQSIILNMRMVPV 357 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 E VF+R+PR++R L +L K++EL+++G+ TELD+++I+ I DPL HL+RNS+DHGIE P Sbjct: 358 ETVFNRFPRMIRQLQKELNKKIELSIIGAETELDRTVIDEIGDPLVHLIRNSIDHGIEAP 417 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMS 446 E RL GK G ++L A H G ++ IEV DDGAGLNR++IL KA +G+ +E + Sbjct: 418 ETRLQKGKPESGKVVLKAYHSGNHVFIEVEDDGAGLNRKKILEKALERGVITEKEAETLE 477 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 D+++ LIFAPGFSTA+Q++D+SGRGVG+DVVK ++ +GG V ++S +G G+ I LP Sbjct: 478 DNQIYELIFAPGFSTADQISDISGRGVGLDVVKNKLESLGGSVSVKSAEGQGSLFSIQLP 537 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LTL+I+ + +++ +E F +P+++++E+ D+ E V++ RG +P+V L + Sbjct: 538 LTLSIISVLLIKLEEETFAIPISSIIETAVIDRKDILQTHDRE-VIDFRGHIVPVVYLKE 596 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 F + + +A Q +++++ G + A +VD IGQ +VV+K+L V IS ATIL Sbjct: 597 EFKIEDTRKDAEQLHIIVVKKGDKPTAFVVDSFIGQQEVVLKSLGDYLTNVFAISGATIL 656 Query: 627 GDGSVALIVDVSALQ 641 GDG VALI+D +AL Sbjct: 657 GDGEVALIIDCNALI 671 >UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae RepID=CHEA_THEMA Length = 671 Score = 621 bits (1601), Expect = e-176, Method: Composition-based stats. Identities = 221/680 (32%), Positives = 365/680 (53%), Gaps = 53/680 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + ++ F DE E L ++ LL L+ D E +N FRA H++KG AGT GFS + + Sbjct: 2 MEEYLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMAK 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD-AASFDYICQAL 123 H +EN+LD+AR E+++ +D+++ D++ +D D + D + Sbjct: 62 LCHTLENILDKARNSEIKITSDLLDKIFAGVDMITRMVDKIVSEGSDDIGENIDVFSDTI 121 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR----------------------- 160 + A K E PS + + E +S S Sbjct: 122 KSFASSGK-EKPSEIKNETETKGEEEHKGESTSNEEVVVLPEEVAHVLQEARNKGFKTFY 180 Query: 161 ----------------RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIA 204 ++ +L+ + +++ + + L I P D+ Sbjct: 181 IKVILKEGTQLKSARIYLVFHKLEELKCEVVRTIPSVEEIEEEKFENEVELFVISPVDL- 239 Query: 205 EDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 + ++ L + + +++ + EV+ K ++ T + E + + S ++ Sbjct: 240 -EKLSEALSSIADIERVIIK--EVTAVTEESGAEKRTEKEEKTEKTEEKAERKKVISQTV 296 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +EK+D L++L+GELVI +S + + L N +L S+ L R DLQ VM I Sbjct: 297 RVDIEKLDNLMDLMGELVIARSRILET---LKKYNIKELDESLSHLSRITLDLQNVVMKI 353 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ +VF+R+PR+VRDLA K+ K+V + G TELD++ +E I +PL HL+RN++DH Sbjct: 354 RMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDH 413 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV--- 441 GIE E+R+A GK +G LILSA H+G N+ IEV DDG G+++E+I+ KA +GL Sbjct: 414 GIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESK 473 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 + +SD E+ +F PGFST E+V++VSGRGVGMDVVK ++ + G + I+S++ GT + Sbjct: 474 AATLSDQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKV 533 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAI+ + V+V + V+ +P+ + L + D+ + + V+ +RGE +P+ Sbjct: 534 TIRLPLTLAIIQALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRD-VIVIRGEVIPV 592 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 LW+V + K E + VI++ G R+Y ++VD L+GQ +V+K+L + +V S Sbjct: 593 YRLWEVLQIE-HKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFS 651 Query: 622 AATILGDGSVALIVDVSALQ 641 A ILGDGS+ALI++VS + Sbjct: 652 GAAILGDGSIALIINVSGIV 671 >UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM20_HIRBI Length = 693 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 251/668 (37%), Positives = 392/668 (58%), Gaps = 20/668 (2%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D F QTFF+E DELL E LQPE D+E LN +FRA HSIK GAG F L Sbjct: 3 DFEQFRQTFFEECDELLQRFEDVATTLQPEGNDSETLNELFRAVHSIKAGAGAFKLDRLV 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H +E+ LD+ R + L D L +++ D+++E ++ + QE + L Sbjct: 63 VYAHELEDFLDQVRGDLIGLQADGPALIIQSGDVLRELVENAQSGQEAPDGLESVTLEKL 122 Query: 124 RQLALEAKGE-TPSAVTRLSVVAKSEPQ-------DEQSRSQSPRRIILSRLKAGEVDLL 175 RQL + E TP AV + ++ + + P+ + + G++++ Sbjct: 123 RQLNPKKAIEVTPVAVVENAEATRTSYEIYFRPFRSMYETANEPQLLFEALSDLGDINIH 182 Query: 176 EEELGHLT-TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 + + + D ++ S + L D + +DITAV FV + ++T + +S + Sbjct: 183 IDTSKVVELSKLDPMESYFSWNIELCSDCSVEDITAVFEFVEDDCELTIKAKTISEADAE 242 Query: 235 PPVLKLAAEQAPTG--------RVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 V + + + E + SIRV +EKVDQL+N+VGELVI Q+ Sbjct: 243 EIVKSSSVDDKSPDGAQVIVGKSAKPETERAKPQLGSIRVDLEKVDQLVNMVGELVIAQA 302 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 M + S + + + ++ L R LQE VM+IRM P++ +FSR+PRLVRDL+ K Sbjct: 303 MALESISSEIGIAQVNQLQALEDLTMRTRQLQEGVMAIRMQPIKALFSRFPRLVRDLSTK 362 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 L K V L L G +TE+DK++IE + DPLTH++RN +DHGIE+PE R+ AGK + G + LS Sbjct: 363 LEKDVTLILEGEATEVDKTIIEELSDPLTHMIRNCMDHGIEMPEDRVQAGKKAQGTVRLS 422 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQV 465 AE + G I I V+DDG GL+ ++++A+A QGL + ++ +++ M+IF PGFSTA V Sbjct: 423 AEQRNGRILIRVSDDGRGLDPDKVVARAIQQGLIAEGDELTKEDIEMMIFRPGFSTASAV 482 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 +DVSGRGVGMDVV+RNIQK+GG + + SK+G G+ + LPLTLA+LDGM V A E ++ Sbjct: 483 SDVSGRGVGMDVVRRNIQKLGGRITLDSKKGHGSCFTLALPLTLAVLDGMLVATAGERYV 542 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVI 584 +PL++++E++ P + + + G +VL +RG + +V+L ++ TE + + VI Sbjct: 543 IPLSSIVETVCPAPSQIKQMPDGGQVLSLRGNTIRLVDLCGCMGLSRKGLTEPLRKLAVI 602 Query: 585 LQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +++ GR+ ++VD+L+GQ QVV+K+LE+NY +PG++ + ILGDG V LI+DV L + Sbjct: 603 VETEFGRQVGIVVDELLGQQQVVIKSLETNYYNIPGVAGSAILGDGRVRLILDVDGLVTM 662 Query: 644 NREQRMAN 651 + ++N Sbjct: 663 TPKPSLSN 670 >UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC8_HELMI Length = 702 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 216/706 (30%), Positives = 354/706 (50%), Gaps = 71/706 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +E+ E L + Q +L L+ + L+ IFR+AH++KG + T GF + Sbjct: 1 MDMSQYMDMFMEESREHLQALNQKILELEDNPQELAILDEIFRSAHTLKGMSATMGFERI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH MEN+L R ++ +NT I++L D ++ ++A + + + + Q Sbjct: 61 AELTHEMENVLSVLRGSQVNVNTAIVDLLFRCLDALESMVEAISSGEAGNRDISELVVQL 120 Query: 123 LRQLALE-AKGETPSAVTRLSVVAKSEPQDEQSRS------------------------- 156 + + A + + V + V SEP+ + + Sbjct: 121 RKAGQGQLADVDAATNVRKAGAVGVSEPKQTEEVTLPVLGGPEVLNAFEINQYDLTLLHE 180 Query: 157 -------------QSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD------SLSA 197 + ++ +A V EE+G + + + S Sbjct: 181 AQRKHFSAYHIQVELAPGCVMKSARAYMVFRNLEEIGEIIKSVPSAQELEDEKFDTSFQV 240 Query: 198 ILPGDIAEDDITAVLCFVIE-------------------ADQITFETVEVSPKISTPPVL 238 ++ E + L + E + E Sbjct: 241 VIVTRQDEVSVRKTLDSIAEVRVKAITPLNIGDVRIQEGQETDVAAHSETEQDAVMARDP 300 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 + + PT ++ ++ S ++RV +E++D L+NLVGELVI ++ L Q S+ Sbjct: 301 SASEKARPTAGPGAQEVRKTKGSQTVRVDIERLDNLMNLVGELVINKTRLEQIST---TS 357 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 N +L ++ + R DLQ VM +RM+P+E VF+R+PR+VRDLA +LGK++ L + G Sbjct: 358 NLTELNETIEHIDRITTDLQNVVMKVRMVPIEQVFNRFPRMVRDLAKELGKEINLIVEGK 417 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELD+++I+ I DPL HL+RN++DHG+E+P+ R GK + L A+H+G N+ IEV Sbjct: 418 ETELDRTVIDEIGDPLVHLIRNAIDHGVEMPDVRRQKGKPVEAVVRLVAKHEGNNVIIEV 477 Query: 419 TDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 DDG G++ + + KA +GL +E + D LIF GFSTAE+V+DVSGRGVG+ Sbjct: 478 EDDGRGMDPQVLRTKAIQKGLLTVKEAEQLDDQGALNLIFLAGFSTAEKVSDVSGRGVGL 537 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 D V+ I+ + G VEI+++ GT +I LPLTLAI+ + V V DE++ +PL + E+ Sbjct: 538 DAVRTKIESLSGSVEIETRLNAGTKFKIRLPLTLAIIQALLVNVGDEIYAIPLGTIDETT 597 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALL 595 + + E VL +RG LP++ L KV V A + VV+++ G ++ L+ Sbjct: 598 SIIPGQIKNVQSQEVVL-LRGNVLPLIRLDKVLEVPKAAEAPEELYVVVVRKGEKKAGLI 656 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VD LIGQ ++V+K+ + + GI+ A ILG+G V+LI+DV L Sbjct: 657 VDSLIGQQEIVIKSPGKLLQGISGIAGAAILGNGHVSLILDVGTLF 702 >UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRN2_ALKMQ Length = 685 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 210/687 (30%), Positives = 351/687 (51%), Gaps = 54/687 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + + F +E+ E L +M +LL L+ D LN IFR AH++KG + T G+ + Sbjct: 1 MDMNQYLEIFIEESKENLQNMNTNLLSLENSLEDMNLLNEIFRIAHTLKGMSATMGYKHI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH MEN+L R EM + +++L E D +++ ++ + S S + Sbjct: 61 AQLTHEMENVLHSIRSNEMSMTAKVVDLLFECFDRLEKYINEVELSGSEGTDSPKILIDK 120 Query: 123 LRQLALEAKG--------ETPSAVTRLSVVAKSEPQDEQS------RSQSPRRIILSR-- 166 L + E P L+ K + ++ +P I + Sbjct: 121 FHLLTVGGPEVTIQVQQSEEPMGSDTLNGTIKLKDHTRKAVHLAMKEGITPYSIKVILDE 180 Query: 167 ---LKAGEVDLLEEELGHLTTLTDVVKGAD---------SLSAILPGDIAEDDITAVLCF 214 LK+ ++ L ++ + + S ++ + ++I L Sbjct: 181 NCMLKSARAYIIINALDGVSEIIQSEPSIEDIEDEKFDLSFELVVLSKVPVEEIERELNE 240 Query: 215 V-------------------IEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 + E + +E + I + K Sbjct: 241 ISDIEFFSVIDLKNQLEDNLHEDQIVNYEDGKNKETIEEMKAQQAVTVTEAGTEKNEVKE 300 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 RS ++RV ++++D L+NLV EL+I ++ L D ++ + L+R Sbjct: 301 KRSKTGKTVRVDIDRLDNLMNLVSELIIIKTRLEDIG---DDGKRQNMNEATEHLERITT 357 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 L ++VM +RM+P+E VF+R+PR+VRDL+ LGK++ L L G TE+D+++I+ I DPL Sbjct: 358 SLHDAVMKVRMVPIERVFNRFPRMVRDLSKDLGKEISLVLSGEETEVDRTVIDEIGDPLI 417 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RNS+DHGIE PE R+ GK+ G + L A G ++ IE+TDDG G+N ++ KA Sbjct: 418 HLIRNSIDHGIEDPEYRMDIGKSKSGTVKLIAYPDGNSVVIEITDDGQGVNILKVKEKAV 477 Query: 436 SQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +GL +E M D E L+F GFSTA++V+DVSGRGVG+DVVK I+ +GG +E+ Sbjct: 478 ERGLVNAEQADLMDDKEAVELLFTAGFSTADKVSDVSGRGVGLDVVKTKIESLGGAIEVD 537 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S++G G+ I LPLTLAI+ + V V +E + +PL+++ E ++ + + E ++ Sbjct: 538 SQKGKGSKFIIRLPLTLAIIQALLVIVGNEKYAIPLSSIKEITTISQSHIRKVQNNE-II 596 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R E LPI+ L + + A E + VVI++ G + L+V++LIGQ ++V+K+L Sbjct: 597 LYRNETLPILRLSNLLGASNADIEEDEATVVIVKKGDKTVGLVVNELIGQQEIVIKSLGK 656 Query: 613 NYRKVPGISAATILGDGSVALIVDVSA 639 V G++ ATILG+G+VALI+D ++ Sbjct: 657 FLGNVQGVAGATILGNGTVALIIDTNS 683 >UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A371_NATTJ Length = 713 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 226/718 (31%), Positives = 376/718 (52%), Gaps = 85/718 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F DEA E L M Q+L+ L+ D L+++FR AH++KG A T G+ + Sbjct: 1 MD-NQYLDVFIDEAREHLQTMNQNLIDLEQSPEDRSILDSLFRVAHTLKGMAATMGYQGV 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH +EN+LD R+GE ++ ++II+L LE D ++E ++ + ++ D F + Sbjct: 60 ANYTHKLENILDSFRQGEKKITSNIIDLLLEGADALEEFVNKLSEGEQVDL-DFSSMQSR 118 Query: 123 LRQLALEAKG---ETPSAVTRLSV------------VAKSEPQDEQSRSQSPRRIILSRL 167 L Q +A ETPS S A SE Q + S ++ + L Sbjct: 119 LEQAFAKADRDSFETPSQAQDTSSTNNEQSKGEAEMAATSEVQTDSSGEKAGSESDILDL 178 Query: 168 KAGEVDLLEEELG----------------------------HLTTLTDVVKGADSLSAIL 199 E +LL+ L + +++K + I Sbjct: 179 NEYEGNLLKSALNDDYSAYHIRVVFDENVLLKGARAFMVFQKVEARGEIIKSDPEVEEIE 238 Query: 200 PGDIAED----------------------DITAVLCFVIEADQITFETVEVSPKISTPPV 237 + ++ +I V V++ DQ+T +T E + + V Sbjct: 239 DENFDQEIELIVVTKVDQQEIKSDIEQVSEINEVYLKVLQEDQLTDKTDEGADEDDDEKV 298 Query: 238 LKLAAEQAPTGRVEREKTTRSNEST------SIRVAVEKVDQLINLVGELVITQSMLAQR 291 + + + K + ++RV +E++D+L+NLV ELVI ++ L Q Sbjct: 299 QTEEQKVQQKDKQDEAKDSDGQSQQKIKTGKTVRVDIERLDKLMNLVSELVINKTRLEQV 358 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 ++ + +L + Q R ++Q VM +RM+P++ VF+R+PR+VRDL+ L K+V Sbjct: 359 ANNKES---SELGKTSEQFSRITSEIQNVVMKVRMVPLDQVFNRFPRMVRDLSRSLNKEV 415 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 L + G TELD+SLI+ I D L HL+RN+LDHG+E E R +GK++ GN+ + A H Sbjct: 416 NLVIEGRETELDRSLIDEIGDLLMHLIRNALDHGLEDSETRHKSGKSAKGNIHIKAYHNE 475 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDV 468 N+ IEV+DDG G++ E++ KA S+GL SE + D EV +F PGFST+++V++V Sbjct: 476 NNVVIEVSDDGKGIDPEKVRKKAISRGLLDSQQSEQVPDSEVINFLFTPGFSTSDEVSEV 535 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVG+DVVK ++ +GG VE+ S+ GT + LPLTLAI+ + V V +E + LPL Sbjct: 536 SGRGVGLDVVKSKLENLGGRVELDSEINQGTKFTMYLPLTLAIIQALMVNVGNEQYALPL 595 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-----AKTEATQGIVV 583 +++ E+ + D+ + + V+ +R + +P+++L + +V + + + Sbjct: 596 SSIEETTILTDQDIQKVQE-QEVIRLRDQLVPLIDLHDILDVERTENGEQEHAEQERFAI 654 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 I++ G ++ L+VD+L+GQ +VV+K+L + G + ATILGDG VALI+DV++L Sbjct: 655 IVRKGDKKAGLIVDELLGQQEVVIKSLGGFLADIKGFTGATILGDGKVALILDVNSLL 712 >UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 Tax=Campylobacterales RepID=Q30QC4_SULDN Length = 803 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 221/657 (33%), Positives = 359/657 (54%), Gaps = 22/657 (3%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD + Q F E+ EL+ ++Q L+ L+ D E LN IFR AH++KG + F V Sbjct: 1 MDEFQEILQDFLVESFELIEQLDQDLVELETRPDDLELLNRIFRVAHTVKGASSFLNFDV 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L TH ME++L+ AR GE+ + I+++ LE+ D+M+ L + + Sbjct: 61 LTHLTHHMEDVLNRARHGELVILPAIMDVILESIDLMKALLHTIRDTSADSGIDVSGCVS 120 Query: 122 ALRQLAL-EAKGETPSAVTRLSVVAKSEPQDEQSR----SQSPRRIILSRLKAGEVDLLE 176 L + A E E P +SEP++ + +Q + + A E++ Sbjct: 121 RLDKCAKGETNIEVPQTTISTPKATQSEPKEVKKEVVVETQESDELDYDNMDADELEAEI 180 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 E L D +K + ED T+ + + V P Sbjct: 181 ERLLKQRQEEDKIKREQKAT-------NEDGATSETNGTEDEYVPVAKAPAVVTPARRPS 233 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 L ++ R +SN +IRV V+++D L+NL+GELV+ ++ L + + +++ Sbjct: 234 SLGDDSDSNDDARAASPAKKQSNVEQTIRVDVKRLDHLMNLIGELVLAKNRLIKINDDVE 293 Query: 297 PVNHGD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 G+ L + + DLQ +VM RM+P+ VF+++PR++RDL+ +L K++ Sbjct: 294 ERYEGESFLEELNQVVSIVSIVTTDLQIAVMKTRMLPIGKVFNKFPRMIRDLSRELNKKI 353 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 EL + G TELDKS++E I DPL H++RNS DHG+E+P+ RL GK+ G + L A ++G Sbjct: 354 ELEISGEDTELDKSIVEEIGDPLVHIIRNSCDHGVEMPKIRLEQGKSETGTIKLKAYNEG 413 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDV 468 I I++ DDG GL+ + + K+ +GL ++NMSD E LIF PGFSTA VT+V Sbjct: 414 NQIVIQIDDDGKGLDVDMLKRKSLERGLITEKEADNMSDKEAFALIFKPGFSTATVVTNV 473 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVGMDVVK NI+K+ G ++I S+ G GT++++ +PLTLAI+ + V V +E + +PL Sbjct: 474 SGRGVGMDVVKTNIEKVNGIIDIDSELGIGTSMKLKIPLTLAIIQALLVGVQEEHYAIPL 533 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 +V+E+++ + +++ + G V+ +R + L +V + +F V + VV+L G Sbjct: 534 ASVLETVRISKDEVYTVE-GRSVMRLREDVLSLVHIGDIFEVERILDSSEYAYVVVLGLG 592 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + L+VD L+GQ ++V+K+L + + GI+ ATI GDG V LIVDV A+ + + Sbjct: 593 ASKLGLIVDTLVGQEEIVIKSLGEFLKGIEGIAGATIRGDGGVTLIVDVVAIMDMAK 649 >UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Tax=Bacteria RepID=A9KND4_CLOPH Length = 697 Score = 612 bits (1580), Expect = e-174, Method: Composition-based stats. Identities = 224/699 (32%), Positives = 365/699 (52%), Gaps = 62/699 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + + F DE E L + + LL+L+ E + + +N IFR+AHS+KG AGT G+ + Sbjct: 1 MDVSQYLEIFIDETKEHLQSLNEQLLILEKEPENEDTINEIFRSAHSLKGMAGTMGYKRM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TH MEN+ E R G+M++ +++++ + D ++ LD S + + I ++ Sbjct: 61 QRLTHDMENVFSEIRTGKMKVKAELVDVLFKGLDALESYLDRIITSADEGTEDNEDIIKS 120 Query: 123 LRQLALEA------KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 L ++ E T SVV+ +E + + Q+ + L+A E L E Sbjct: 121 LNRILEEGVKAFAQDATESKEETHKSVVSAAEVSNLKESVQADIALADHELRAVEKMLEE 180 Query: 177 -----------------------------EELGHLTTLTDVVKGADSLSAILP------- 200 EELG + V+ + L Sbjct: 181 GGHAYSLTIYIQESCILKAARAFLVFKALEELGDIIKSKPEVQDIEDERFDLDFSVVLLT 240 Query: 201 --------------GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 +I DI+ ++ E + T +E + + A+ A Sbjct: 241 KESMSKVEKVVSNVSEINGVDISEIIVPKSEHKEETLHELESKQEQKSLSKNSYNAKSAA 300 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML-AQRSSELDPVNHGDLIT 305 ++E + + S+RV +EK+D L+NLV EL+I ++ L + +E G Sbjct: 301 ATAKQKEA-AKPVVNRSVRVDIEKLDDLMNLVSELIIAKNGLVSMNGTETKSDAMGGFNE 359 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + L+R +L +SVM +RM+P+E V +R+PR++RDL+ KL K++EL + G TELD++ Sbjct: 360 QIEYLERITTNLHQSVMKVRMVPIESVVNRFPRMIRDLSKKLDKKMELYMTGEDTELDRT 419 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +I+ I DPL HL+RN+ DHG+E E+R++ GK +G++ L A +G N+ IEV DDG+G+ Sbjct: 420 VIDEIGDPLMHLLRNAADHGLESNEERMSLGKPEIGSIFLDAYQEGNNVVIEVRDDGSGI 479 Query: 426 NRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 N E+I KA +G E M+D E+ L+F P FSTAE ++DVSGRGVG+DVVK I Sbjct: 480 NVEKIKNKAIDKGTITEEQAAAMTDKEIIDLLFRPSFSTAEVISDVSGRGVGLDVVKTKI 539 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 + +GG++E ++ G+ I LPLTLAI+ + V + E + +PL ++ ++ Sbjct: 540 ETLGGNIETKTTLSKGSNFIIRLPLTLAIIQALMVELGTEKYAIPLGSIETIENVATKEI 599 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + E V+ +RG +P++ L K+ +V E VVI++ G + L+VD LIGQ Sbjct: 600 KYVQSKE-VIHLRGNVIPLIRLNKILDVTENLKETEDLTVVIVKKGDKLAGLVVDNLIGQ 658 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 ++V+K++ IS ATILGDG +ALI+DV++L Sbjct: 659 LEIVIKSIGKYINNSKMISGATILGDGEIALILDVNSLV 697 >UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW48_HALOH Length = 655 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 227/662 (34%), Positives = 367/662 (55%), Gaps = 30/662 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD +++ Q FFDE+ E L + +++L L+ + + E +N +FRAAHS+KG A T GF L Sbjct: 1 MD-NNYLQMFFDESSEYLRILNENVLALEQDPENIELINEVFRAAHSLKGMAATMGFQYL 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH +EN+LD+ R G++ +N DII+L + D +++ ++ K E YI Sbjct: 60 TDLTHKIENILDKVRNGQLNINEDIIDLLFDGLDYIKQLVEDIKNEGEEATDVSAYIKDL 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI-----------ILSRLKAGE 171 + +E + + E ++ ++ I +L ++ Sbjct: 120 ENYVDIEGVSLDEDSSPGDISFSDEEKKEIFAKMHESDNIYKVNVKLVKDCLLKNVRGFM 179 Query: 172 VDLLEEELGHLTTLT------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 + EELG+L + DS+S IL + +I L +++ D++ E Sbjct: 180 ILKNAEELGYLVKSKPTKDNIEDEDFGDSISLILVSKLNSSEIKKELGNIVDVDKVEIEV 239 Query: 226 VEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQ 285 + S+ + + + + +++ T S ++RV + K+D L+N+VGEL+I + Sbjct: 240 INNEFNESSEQQNTIKKVKPTSKKTSKKRLTSMEVSPTVRVDINKLDNLMNMVGELLINK 299 Query: 286 SMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAG 345 + L + E + + QL R +L VM IRM+P+ +F+R+PR+VRDL+ Sbjct: 300 TRLEDLNIESEVYQ-----DIIQQLDRVTMELHHIVMQIRMVPIGGIFNRFPRMVRDLSK 354 Query: 346 KLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLIL 405 +L K+++L + G+ TELD+S+I+ ++DPL H++RN++DHGIE PE+R+ GK+ G ++L Sbjct: 355 ELNKEIDLIIEGAETELDRSIIDELVDPLIHILRNAVDHGIESPEERVKKGKDRRGTILL 414 Query: 406 SAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTA 462 A +G I IEV DDG G+ E + KA +GL E M D + LIF PGFST+ Sbjct: 415 QAYQKGSEIIIEVEDDGRGIEPEVLAEKAIEKGLVTLEEVEAMDDRDKLNLIFRPGFSTS 474 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 + +TDVSGRGVGMDVVKR ++ + G + I+S GT I LPLTLAI + V+V +E Sbjct: 475 KTITDVSGRGVGMDVVKRVVESLDGQIFIESDVDVGTRFTISLPLTLAITQALMVKVNEE 534 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA---GAKTEATQ 579 +F +PLNA+ E+L D+ + G+ V+ +R +PIVE K N+ G + + Sbjct: 535 IFAIPLNAISETLTVTPDDIRQVR-GQDVIVLRDRTIPIVECSKQLNMDVEYGLYLKREE 593 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 VVI+ G R+ L+VD+L+ Q ++V+K+L S IS ATI+GDG VALI+DV Sbjct: 594 IPVVIINQGDRQVGLIVDELLNQQEIVIKSLGSYLVDTKNISGATIVGDGDVALILDVRN 653 Query: 640 LQ 641 + Sbjct: 654 IA 655 >UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYP7_BRAHW Length = 720 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 232/719 (32%), Positives = 380/719 (52%), Gaps = 71/719 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D +F F EA+E++ +E L++L+ D + LN IFR+AH++K AGT GF++ Sbjct: 1 MFDSDEFISIFLSEANEIVEGLENDLVLLEDNKSDEDLLNKIFRSAHTLKSSAGTVGFTI 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS--QEPDAASFDYI 119 + E H+ ENLL++ R G++ + +I + LE D ++ L + + D + Sbjct: 61 MSELNHVAENLLEKVRSGKLDVTPQMITVLLEFLDTVKLMLQNIVDGKSETEGVTNIDSL 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEP-----------------QDEQSRSQSPRRI 162 ++ +A T +A + S K E + S Sbjct: 121 KAKIKAIADGNDVSTAAATPKASPEPKKEEPAKEEAKTEEKKEDTKTESPASSGGENSFH 180 Query: 163 ILSRLKAGEVD----------------------LLEEELGHLTTLTDVVKGADSLSAILP 200 I KA D + L + L D S Sbjct: 181 IEMGFKATIFDNGIDPLMFLNDLRAIGTISNLRIECNSLPTILNLEDPYVCYTQFSLDFE 240 Query: 201 GDIAEDDITAVLCFV---------------IEADQITFETVEVSPKISTPPVLKLAAEQA 245 + E+ + + FV + ++ + + + A + Sbjct: 241 TNAPEEQVQNIFLFVIDDNDINIINTKADIKDDEEANKPAESKKEEPAKEEAKENTAAKT 300 Query: 246 PTGRVE-----------REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 E + T+ +++RV K+D L+NL+GELVI QS + Q + Sbjct: 301 EEKPAETSAAASKPAAAPKAGTKVQAPSTVRVDTRKLDSLMNLIGELVIAQSRIMQLTQS 360 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LD N L ++ + R +R +QE VM+IRMMP+ +F+++ R VRDL +L K+V+L Sbjct: 361 LDIDNG--LKEAVSSMDRTSRQIQEEVMNIRMMPIGPIFTQFHRYVRDLNLELNKEVKLV 418 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGN 413 L G +TE+DK+++E++ DPL H++RNS+DHGIE E+R+A GK G + +SA HQ G+ Sbjct: 419 LKGETTEIDKNMLEQLSDPLKHIIRNSMDHGIEKTKEERIARGKPEYGTITMSAAHQEGH 478 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 + IEV+DDG GLN+E+I KA +GL + SD E+ IF+PG STAE++TD+SGRG Sbjct: 479 VVIEVSDDGNGLNKEKIFNKAVEKGLLSRDGKYSDIEIYRTIFSPGLSTAEKITDISGRG 538 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV+ N++KM G +EI+S +G G+T I LPLTLAI++G++ + +++I+PL +++ Sbjct: 539 VGMDVVRANVEKMKGKIEIKSTEGQGSTFIIKLPLTLAIIEGITFALGKQIYIMPLISII 598 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E ++ + + P G ++++R EYLP++ L KVF + GIVV++++G R+ Sbjct: 599 EQIKVKNEQVKPFEGKGEMIKIRDEYLPLIRLHKVFEIDTQVDNIDDGIVVVVEAGYRKC 658 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 A+ VD+L+ Q QVV+K+L+S + K GI+ TILGDG +ALI+D+ L ++ + ++ N Sbjct: 659 AIFVDELLDQQQVVIKSLDSAFSKHAGIAGGTILGDGRIALIIDIQGLVNMSLQGKINN 717 >UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobacteria RepID=CHEA_RHIME Length = 758 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 263/748 (35%), Positives = 400/748 (53%), Gaps = 101/748 (13%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + FF E +E LA++E LL L D E +NA+FRA HSIKGGAG FG L Sbjct: 1 MDMNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H+ E LD R ++ N D++ + L + D++ + +A + D A + + Sbjct: 61 VSFAHVFETTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIKE 120 Query: 123 LRQLA---------LEAKGETPSAVTRLSVVAKSE-------------PQDEQSRSQSPR 160 L LA A TP+ V + V E DE + S Sbjct: 121 LEALANGELPQAAAESAPKTTPAGVAPAAPVVNEEGFQPVAFSFDDFETGDEPTIEPSTY 180 Query: 161 RIILS-----RLKAGEVDLLEEELGHLTTLT--------------DVVKGADSLSAILPG 201 I+ K + LL +L L ++ + + S L Sbjct: 181 EIVFKPKSDLYSKGNDATLLLRDLSRLGEMSIHCNMDTLPPLDRMNPEEAYFSWKISLKT 240 Query: 202 DIAEDDITAVLCFVIEADQITFE-------TVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 D E+ I +V F ++ E P P L + ++A E ++ Sbjct: 241 DKGEEAIRSVFEFAEWDCELDVALAGGTVGMDEDLPMQPVPFDLSILEDEAQAPAGEEDR 300 Query: 255 TTRSNEST---------------------------------------------------S 263 S + + Sbjct: 301 AAASEGDSRNAAVAAAQTASNVLQMAQSTARVSPENARNSQSASAAQAAAQQAASAATPT 360 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 IRV +++VD+LINLVGELVI Q+ML+Q E D + + +LQ+ R++Q+SVM+ Sbjct: 361 IRVDLDRVDRLINLVGELVINQAMLSQSVIENDTNGTSSINMGLEELQQLTREIQDSVMA 420 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IR P++ VF R R+VR++A GK V L G +TE+DK++I+++ +PLTH++RN++D Sbjct: 421 IRAQPVKPVFQRMSRIVREIADMTGKSVRLITEGENTEVDKTVIDKLAEPLTHMIRNAVD 480 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HG+E PEKR+AAGKN G + L+A+H+ G I IE+ DDGAG+NRE++ KA L ++ Sbjct: 481 HGLETPEKRVAAGKNPEGTVRLTAKHRSGRIVIELADDGAGINREKVRQKAIDNDLIAAD 540 Query: 444 -NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 N+SD+EV LIF GFSTA++++D+SGRGVGMDVVKR+IQ +GG + I SK G G+ Sbjct: 541 ANLSDEEVDNLIFHAGFSTADKISDISGRGVGMDVVKRSIQALGGRINISSKPGQGSIFT 600 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 + LPLTLA+LDGM V VA++ ++PL A++E+LQP + +H +R++ +R + P+V Sbjct: 601 MSLPLTLAVLDGMVVTVANQTLVVPLTAIVETLQPEASAIHSFGSSQRLISIRDSFCPLV 660 Query: 563 ELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 ++ ++ N GA+ +G+ ++++S GG + AL+VD + GQ QVV+K+LE+NY VPGI+ Sbjct: 661 DVGRILNFRGAQANPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIA 720 Query: 622 AATILGDGSVALIVDVSALQAINREQRM 649 AATILGDG VALI+DV A+ A +R Q + Sbjct: 721 AATILGDGRVALILDVDAIVAASRGQSL 748 >UniRef50_A3EPP7 Putative signal transduction histidine kinase (CheA) n=2 Tax=Leptospirillum sp. Group II RepID=A3EPP7_9BACT Length = 649 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 214/658 (32%), Positives = 345/658 (52%), Gaps = 38/658 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + Q F EA+E+L ++ + + L+ D LN IFR AHSIKG AG G + + Sbjct: 9 EMKEILQDFLTEAEEMLEGLDTYFVQLESRPDDRTLLNEIFRTAHSIKGSAGFIGLNRIV 68 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E H EN+L++ R+G+M+ +I++ LE D ++ + + P D + Q L Sbjct: 69 EVAHHAENVLNQLRQGQMRAEPLVIDIILEAMDALKLLVREVRTGT-PADVDIDALSQKL 127 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 L + + ++ EE +G Sbjct: 128 DLLMQWGEDVQSESAQEQQEQEGEGAREHP----------------------EETVGKTA 165 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 T V L + + + + EA+ + V + L + Sbjct: 166 PETPVPSET-----TLLPEAFQVEDEELAAGQTEAETGAGKPVPAREPVPPSRSLSPKVD 220 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH--- 300 P E +IRV ++D ++NLVGELV+ ++ L + S + + Sbjct: 221 SPPPSASEGPSAGAGESDQTIRVETSRLDNVMNLVGELVLGRNRLVRLSGDQSGLQDVQQ 280 Query: 301 --GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 ++ ++ QL R DLQ +V+ RM P+ V ++PR+VRDL+ K+GK+V L L G Sbjct: 281 QLKEISEAVAQLSRVTTDLQLAVIKTRMQPIRKVLGKFPRMVRDLSRKMGKEVRLELSGE 340 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELDKS+IE I DPL H++RN++DHG+E PE+R A+GK + G + + A +G +I IEV Sbjct: 341 ETELDKSVIEEIGDPLVHIIRNAIDHGLESPEERQASGKPAEGVVRIGAYQEGNSIVIEV 400 Query: 419 TDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 +DDG G+N ER+ KA + L ++ MS+ E+ LIF PGFSTAE++TDVSGRGVGM Sbjct: 401 SDDGKGINVERVKQKAIERRLISGADADRMSEGELVNLIFLPGFSTAEKITDVSGRGVGM 460 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVV+ NI K+ G VE+++ G G+T I LPLT+AI+ + V + EV+ +PL V+E++ Sbjct: 461 DVVRTNINKINGSVEVRTTPGAGSTFIIRLPLTIAIIQALMVTIGAEVYAIPLQTVVETV 520 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVILQSGGRRYAL 594 + ++ L+G + VL +R + LP++ L F V + ++ VV++Q G R L Sbjct: 521 KITREEVKTLSGSD-VLNLRDQVLPLLRLRDEFKVPDTDPADPSRCYVVVVQLGSRLLGL 579 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 +VD+L Q +VV+K++ + G++ ATI GDG V LI+DV+ + + ++ + Sbjct: 580 VVDRLPYQEEVVIKSMGPLLSGIRGMAGATITGDGKVVLILDVAEILQDIQLRQQSGA 637 >UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Tax=Archaeoglobus RepID=D2RE79_ARCPR Length = 626 Score = 611 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 228/642 (35%), Positives = 362/642 (56%), Gaps = 21/642 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S++ Q F E E + M Q+ + ++ D E LN IFR AH+IKG AG G+ L Sbjct: 1 MDLSEYKQEFLQEVKEYIDVMNQNFIKVEK--GDLEALNEIFRVAHTIKGMAGFMGYKKL 58 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E+ + + R G + + D+I++ L+ D ++E ++ + S++ D D + + Sbjct: 59 ELLCHRLESAMGKVRDGVVNVTEDLIDVMLKAVDKIEEIVEKIE-SEDNDDVDIDEVISS 117 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L + E + + +S+P D + + +K+ L+ E L + Sbjct: 118 LESIIGEVR-------SSKCEKKESKPFDNANLRVDVKLADDCVMKSVRATLILESLKDV 170 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + V D++ + + V + E ++ Sbjct: 171 CEVIGVDPDEDAMDSDDFDGTFSIYVKGDRKAVEDVMSKVGEVERFDIVEIKQQRIEKKV 230 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E+ +E+ R NE SIRV +E++D ++NLVGELVI + L Q + + D + Sbjct: 231 EKPVVKEQMKEEKLRKNE--SIRVNIEQLDTIMNLVGELVIGKGRLIQIAQDYD---IPE 285 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L ++ + + LQ+ +M IRM+ +E VFS++PR+VRDLA KLGK+VEL + G TEL Sbjct: 286 LKEAVSVMDKAITSLQDEIMRIRMVKVERVFSKFPRMVRDLARKLGKKVELIIEGQDTEL 345 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPL H++RN++DHGIE PE+R AGK+ VG ++LSA + N+ IE+ DDG Sbjct: 346 DRTVLDEITDPLIHIIRNAVDHGIETPEERKKAGKSEVGKIVLSARREKNNVVIEIEDDG 405 Query: 423 AGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ E++ KA +GL E+MS+DE+ MLIFAPGFST ++ T+VSGRGVGMDVVK Sbjct: 406 RGIDVEKVKKKAIEKGLITPAEAESMSEDEIKMLIFAPGFSTKDKATEVSGRGVGMDVVK 465 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 ++K+GG+V+I S++G GT I I LP T+AI + +RV +E F +PL++V+E++ E Sbjct: 466 TRVEKLGGNVKIYSEKGKGTKIVITLPPTVAITKALLIRVGNEDFAIPLSSVVEAIYVTE 525 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + + + G L VR +P L ++FN+ K E G +I++ G R AL+ D + Sbjct: 526 EN-YKVLHGTPFLYVRNNLIPAFRLRELFNIKNGKAEREVG--IIVEREGDRIALIADAI 582 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 Q ++V+K L S KV G S TILGDG V I+DVS L Sbjct: 583 TDQLEIVIKPLTSFLSKVRGFSGITILGDGRVVPIIDVSTLL 624 >UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1HQY1_LYSSC Length = 690 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 225/693 (32%), Positives = 377/693 (54%), Gaps = 58/693 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M+++ + + F +E+ E L +HLL L+ D + IFR+AH++KG + T GF L Sbjct: 1 MEVNQYLEMFIEESKEHLQACSEHLLALEKNPDDLAIVGEIFRSAHTLKGMSATMGFEDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH MEN+LD R ++ + +I+++ E+ D ++E + + + Q Sbjct: 61 ADLTHKMENVLDAIRNEKIHVTPEILDVVFESVDHLEEMVMDIANGGDGKRDVSATVAQL 120 Query: 123 LR-QLALEAKGETPSAVTRLS--------------VVAKSEPQDEQSRSQSPRRIILSRL 167 R +L EA E + V + V+ +S Q + S + L Sbjct: 121 KRIELGEEAVPEVVATVAEPAAVECVLEYDSFEQTVITQSAEQGFHAYEISVKLREDCLL 180 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGADSLS----------AILPGDIAED---------DI 208 KA V ++ E L + + L A + + AED ++ Sbjct: 181 KAARVFMVFEILEKDGEVIKSSPSVEKLEDEQFDQQFYVAFVTKESAEDMQKKIMKVSEV 240 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST------ 262 V+ I+ + + E +++ + E T + + + T Sbjct: 241 EEVIVTAIDQKKFSEREYESQQEVAATALAVAEVESTSTPDPSKPEPVAQSVKTAAPAKA 300 Query: 263 ----------SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 +IRV +E++D L+NL ELVI + L ++E VNHG+L ++ ++ R Sbjct: 301 EKNHAPVGNKTIRVNIERLDILMNLFEELVIDRGRLQSIATE---VNHGELNETVERMSR 357 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 DLQ ++++RM+P+E VF+R+P+++R L+ L K++ L ++G+ TELD+++I+ I D Sbjct: 358 VMGDLQTIILTMRMVPVETVFNRFPKMIRQLSRDLNKKINLEIIGAETELDRTVIDEIGD 417 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RNS+DHGIE P R A GK G ++L A H G + IE+ DDGAG+NR+++LA Sbjct: 418 PLVHLIRNSVDHGIENPTSRRAKGKPEEGTVVLRAYHSGNYVFIEIEDDGAGINRDKVLA 477 Query: 433 KAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 KA S+G+ E MSD+++ LI A GFSTA+ ++DVSGRGVG+DVVK I+ +GG++ Sbjct: 478 KAISKGIVTQEQSYSMSDNQINELILASGFSTADVISDVSGRGVGLDVVKTTIESLGGNI 537 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 I+S Q G+ I LPLTL+I+ M V + E++ +PL++++E+ R +++ A + Sbjct: 538 SIESTQDVGSIFSIQLPLTLSIISVMLVEIEKEIYAIPLSSIIETSIIRSSEIMN-AHNQ 596 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQHQVVVK 608 +V++ RG+ +P+V L ++F V + + + VVI++ G + L+VD IGQ ++V+K Sbjct: 597 KVIDFRGKVVPLVFLEEIFEVPRTEPQDEEFHSVVIVRKGEKLAGLVVDSFIGQQEIVLK 656 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +L + + IS ATILG+G VALIVD +AL Sbjct: 657 SLGNYLTNIFAISGATILGNGKVALIVDCNALI 689 >UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GS07_9BURK Length = 659 Score = 609 bits (1571), Expect = e-172, Method: Composition-based stats. Identities = 225/653 (34%), Positives = 359/653 (54%), Gaps = 17/653 (2%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +D+ FF EA +LLAD+E +L L+ D E LNA FRA H+IKG AG FGF+ + Sbjct: 5 IDLDSIKSVFFAEAYQLLADVENLILQLEKNPEDLELLNAAFRAIHTIKGSAGVFGFANI 64 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H +E +LD R E+Q ++ + NL L D + +++ ++ + + + Sbjct: 65 THFVHDLETVLDRVRNQELQFDSALGNLVLACCDQVHTLVESLERGVDAADLDQQCVAEQ 124 Query: 123 ------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 L+ L+ + S T ++ D P I K+G+ +E Sbjct: 125 AGLTGQLKAYLLDEPADAVSTGTSQWLIQVELGVDTFRDGFDPYSIFNYLAKSGKFKSME 184 Query: 177 EELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 +L H+ L + + AI + +E +I F+ E +++ + V+ ++ Sbjct: 185 PQLQHIPKLGEFDPESCFLGFKAIYETEQSEAEILDAFEFLPEECKVSVTSAAVAVPVTE 244 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 +EQ + K +++IRV +K+D LINLVGELVI + +++ + Sbjct: 245 EK--NTVSEQVRELKTAARKAPVKAATSTIRVQSDKLDALINLVGELVIANAGTVEQARK 302 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 L+ + + ++++ + +RM+ + F R+ R+VRD A LGK+V+L Sbjct: 303 SQSFA---LLEATCAVGALIEEIRDGALGLRMVEIGECFQRFQRVVRDTAQSLGKEVDLI 359 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELDKS++E+I DPL HLVRN++DHG+E P++RL AGK L L+A H GG+I Sbjct: 360 IQGEETELDKSVVEKISDPLMHLVRNAMDHGLETPDERLGAGKQDKAKLTLNAYHDGGHI 419 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 IEV+D+G GL E+I KA +G+ + +++S+ ++ MLIFAPGFSTA VTD+SGRGV Sbjct: 420 VIEVSDNGRGLVHEKIRTKAIEKGIVSATQSLSESDINMLIFAPGFSTAAAVTDISGRGV 479 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVKRNI+ + G V ++SK+G GTT I LPLTLAI+DG + V + V+++PL V E Sbjct: 480 GMDVVKRNIEALRGTVNVRSKEGVGTTFEIRLPLTLAIIDGFQIAVGNSVYVIPLAYVRE 539 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 ++ + ++RGEYLP + L KVF K + ++++ GG + Sbjct: 540 CVELT-GQGGGSDAVDLSYDLRGEYLPCIRLRKVFGETSDKPKREN--IIVVSHGGLKVG 596 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 ++ D+L+G+ Q V+K L + P +S TI+G+G VALIVD+ L + + Sbjct: 597 IVADRLLGESQTVIKPLGGLFEGNPAVSGGTIMGNGEVALIVDIPKLISEVGQ 649 >UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD03_RHOVA Length = 701 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 251/656 (38%), Positives = 377/656 (57%), Gaps = 15/656 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++D++ F TFFDE E+L D++ L L A D+E LNAIFRA HSIK GA F F Sbjct: 8 ALDLNQFRATFFDECAEVLPDLDSRLSTLDANAADSENLNAIFRAVHSIKAGAAAFNFRS 67 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L H E LLD R M+L+ D+ ++ L D++ +DA + + Sbjct: 68 LVTFAHGFEALLDRLRDDRMELSADVASVCLRAGDVLAALVDAAQMDTAIPEGFGADVLA 127 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR----------SQSPRRIILSRLKAGE 171 + L G + E + + + P II + GE Sbjct: 128 EVEGLMNSDVGRASFPEATAAATDDGEMRIWRITFTPHRELFRHANEPLLIIRELKRLGE 187 Query: 172 VDLLEEE-LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 +D+ + D + S L + I V FV + + E Sbjct: 188 LDVCCDRCELPDLERLDPEESYLGFSFRLRTKASRAAIDEVFEFVDQDCDLVVEVEPAET 247 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 T + +E P + + ++ + +RV + +VD+LIN+VGELVITQ+ML Q Sbjct: 248 PRETKVPPRALSESLPAAGRDGSER-KAKSPSFVRVDLARVDRLINMVGELVITQAMLTQ 306 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + SE + +L + R+LQE VM+IRM P VF+R RLVRDL+ KLGK+ Sbjct: 307 QLSEHGTNMRDQRVQGADELAAHIRELQECVMAIRMQPARTVFARMGRLVRDLSHKLGKK 366 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V L G TE+DK+++E ++DP+TH++RN++DHGIE+PE RLAAGK + LSA + Sbjct: 367 VRLVTSGDETEVDKTIVEELVDPITHMIRNAIDHGIEMPELRLAAGKPEEAVIHLSATQR 426 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVS 469 GNI I + DDGAG++ E++LAKA S+G+ + +S++E+ LIFAPGFSTAE+VT+VS Sbjct: 427 AGNILITIADDGAGIDTEKVLAKAISKGIVRDDAKLSEEEIHELIFAPGFSTAEKVTEVS 486 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV+RNI +GG + S QG G++ +++PLTLA+LDGM V V +E +I+PL Sbjct: 487 GRGVGMDVVRRNIASIGGRIHTNSVQGQGSSFTLVIPLTLAVLDGMHVAVREEKYIIPLA 546 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-G 588 +++E+++P + +AGG+ V+ +RGEY+ ++ L ++FNVAG ++ +VV++++ Sbjct: 547 SIVETVRPDRRQIRSVAGGD-VIFIRGEYIRLIHLHRLFNVAGEGEDSHPSLVVVVETEN 605 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 G + L+VD+LIGQ Q V KNL N VPGI+ ATILG+G VALI+++ + +I Sbjct: 606 GTKAGLVVDELIGQQQFVFKNLNENADPVPGIAGATILGNGRVALILNLEDICSIA 661 >UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0S0_HALOH Length = 699 Score = 606 bits (1563), Expect = e-172, Method: Composition-based stats. Identities = 240/693 (34%), Positives = 380/693 (54%), Gaps = 55/693 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D TF +EA ELL M LL L+ + D + +N IFR H++KG A G + + Sbjct: 5 DLLNTFIEEAKELLDKMVVDLLELEAKPGDMDLINNIFRGMHTLKGSASLTGLNDIANFV 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQALRQ 125 H E+LLD+ RRG + +N +INL L D++ E ++A + + I +++ Sbjct: 65 HHSEDLLDQVRRGCITVNDKVINLLLTCTDLIGEMVEALGNDDVQVKNEKVESIIWEIKK 124 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQ-------------SRSQSPRRIILSRLKAGEV 172 L + TPS L + E+ P ++ + ++ Sbjct: 125 LLKDQTEHTPSEEGSLGDNLHNFGTGERCYRIKLDFNPNLFETGTDPLMLVRELREFSDI 184 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCFVIEA------------ 218 ++ + L ++ L+ + + D I V FV Sbjct: 185 LMVAVNYTRVPDLYNLDPELCYLTLTILIKTGVGIDRIKDVFIFVQVDNKVEIEDITENF 244 Query: 219 ---------DQITFETVEVSPKISTPPVLKLAAEQAPTGRV-----------------ER 252 D+ T E + + + + A Q G + ++ Sbjct: 245 SDNIDISLSDKKTGEILVERGIVEEEDITQALARQKKIGEILTEEGKVSREQVQRVVYDQ 304 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 K+ E ++I+V K++ L+N + ELVI Q+ + + + +++T++ + + Sbjct: 305 HKSRAVKEKSTIKVDTHKLESLMNSMAELVIAQAKVRELVIHRTDRSENEIMTALNSVDK 364 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 R+LQE +M +RM+P+ F R+ RLVRDL+ + GK++ L + G TELDK +IERI D Sbjct: 365 RIRNLQEDIMKVRMVPIGNTFLRFKRLVRDLSREQGKEINLEIRGKETELDKIVIERIYD 424 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H++RNS+DHGIE PE+R A GKN VG + L++ HQ GNI IEV DDG GL++E+IL Sbjct: 425 PLKHMIRNSVDHGIEPPEEREALGKNRVGTISLNSYHQEGNIIIEVADDGRGLDKEKILD 484 Query: 433 KAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 KA ++G+ + +++ + LIF PG ST+E+VT+ SGRGVGMDVV+ NI+++ G + I Sbjct: 485 KAINRGVVDEDQELTEQGIYRLIFEPGLSTSEEVTETSGRGVGMDVVRNNIEQLRGTINI 544 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 S G GT +I LPLTLAI+DGM+V+V DE FI+PLN+++E ++P + + G V Sbjct: 545 FSNPGEGTRFKIKLPLTLAIIDGMNVKVGDEQFIIPLNSIVEFIRPLPEHIKTVNGKGEV 604 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 ++VR EY+ + L+K+FN+ G+KT+ T+GI+VILQ R+ LLVD+++GQ Q VVK++E Sbjct: 605 VKVRDEYITLSRLYKLFNLKGSKTDPTEGILVILQDENRKLCLLVDEIVGQQQAVVKSME 664 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 NY + GI+ ATI+GDG VA+I+DVS + + Sbjct: 665 DNYTFIDGIAGATIMGDGRVAMILDVSTIIRMA 697 >UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7Z2_UNCMA Length = 653 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 202/662 (30%), Positives = 363/662 (54%), Gaps = 30/662 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S + F EA E L ++ LL L+ DA+ + IFR+AH++KG + + GF ++ Sbjct: 1 MSAYRDMFVSEAREHLQNLNSSLLALEKCPTDADVIQEIFRSAHTLKGMSASMGFKEMET 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ--- 121 H ENL D R G++ +T ++ + ++ D ++ +DA + + + + Sbjct: 61 LCHRTENLFDRIRNGQLVADTRVVTVLFKSLDTLEAMVDAIEAGESGSLDVAALVKEIES 120 Query: 122 ------------ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 ++ + G +A V + + P + S+ ++++ K+ Sbjct: 121 MDVNSACSGPQPQVQAHEAQPSGAAHAAADTPEVQSMAIPAGAAAGSKE-FEVVVTVEKS 179 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 E + L + L+++ K A ++ I DI ++ ++++D+ E + + Sbjct: 180 CEFKGIRAFL-VIQQLSEIGKVASTVPDI--KDIEDERFGQEFTVLLQSDRTAGEIEKKA 236 Query: 230 ---PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 +I V ++ ++A G + S+R+ ++++D ++NLVGELVI++ Sbjct: 237 RNVAEIGAAKVTEIVRKEAAGGPARPAGKEGTKVIHSVRIDIDRLDIIMNLVGELVISRG 296 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 L + + +L ++G + R+ DLQ VM IRM+P+++VF+R+PR+VRD++ K Sbjct: 297 RLFEICGKQ---GIHELNETLGMVDRSITDLQNEVMRIRMLPVDHVFNRFPRIVRDISKK 353 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 GK++E T+ G TELD+++++ I DPL HL+RN++DHGIE PE R+A GK + G + L Sbjct: 354 EGKEIEFTIEGQDTELDRTVLDEISDPLNHLIRNAVDHGIEKPEDRIAQGKPATGQIQLI 413 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAE 463 A + N+ IE+ DDG G++ +R+ KA +GL ++ MS++E MLIF PG STA+ Sbjct: 414 ARRERSNVIIEIIDDGKGIDVDRVKRKAIDKGLITQAQADAMSEEEGVMLIFKPGLSTAD 473 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 +VT+VSGRGVGMD+VK I+ +GG V+I++ G GT + LP T+AI+ + V V E Sbjct: 474 RVTEVSGRGVGMDIVKTKIESLGGTVKIETHLGKGTKTILKLPPTIAIVQALLVNVGAEK 533 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVV 583 + + + V+E+ ++ D+ + G E V+ +R LP+ L+K F+V + + V Sbjct: 534 YAISITNVVETEYVKDKDIKTINGNE-VIVIRDTILPLYRLYKFFDVE-VDSSLKRHTAV 591 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +++ G + ALLVD + Q ++ VK L + V G+ TI+G+G V I+DV+ + + Sbjct: 592 VVEKGEEKVALLVDSIESQQEIFVKPLGGLLQNVKGLEGVTIMGNGRVVPILDVATITEV 651 Query: 644 NR 645 + Sbjct: 652 KK 653 >UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC1E2 Length = 697 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 297/688 (43%), Positives = 407/688 (59%), Gaps = 45/688 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+DI F+ FFDE+DE L DMEQ L+ L E+PD E+LN+IFRAAHSIKGG+G FGF Sbjct: 1 MSIDIEQFHGVFFDESDEHLDDMEQLLMSLDVESPDPEELNSIFRAAHSIKGGSGIFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+MENLLD+AR E+ + DI+N+ LET D++++ L+AY+ S Sbjct: 61 ALMNLTHVMENLLDKARNNELSVTADIVNVLLETLDVLKDTLNAYRDETPVPEDSIAERI 120 Query: 121 QALRQL-------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV- 172 + L + G+ S V+ + ++ P I + + Sbjct: 121 KILNGVINGQYTDPAPGDGDDSSEVSVNAHNESAQDDSFGFFDDEPNSAIEAADDSFGFF 180 Query: 173 -DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 D E+ T D +I+ + + A + Sbjct: 181 DDEPVNEVLSHGDNTKSENNDDDGFGFFDDEISNNTVDAQTETTKTETAEVEQGFGFFED 240 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTR---------------------------------- 257 + + + E A + + T Sbjct: 241 APSATNINTSLEIASSNNAQSASTQSNTATTSNNDKAPTSGVAPTTTQVKTPPKPPAKKS 300 Query: 258 -SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 + ES SIRV K+D ++NLVGELVITQSML+ +++ L ++ +LQRN R+ Sbjct: 301 TARESASIRVDTTKIDAMVNLVGELVITQSMLSMIGQDVEGQVGERLQLAIDELQRNTRE 360 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 +QESVMS+RM+P+ F+R+PRLVRDLAGKLGKQVEL L G STE+DKSLIE+I+DPLTH Sbjct: 361 IQESVMSMRMLPLTATFNRFPRLVRDLAGKLGKQVELVLQGGSTEIDKSLIEKIVDPLTH 420 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRNS+DHGIE+P+KR+AAGK G +ILSAE +GG+I I + DDG GL+R++IL KA S Sbjct: 421 LVRNSIDHGIEMPDKRVAAGKPEKGTVILSAEQKGGSIIISIIDDGGGLHRDKILDKARS 480 Query: 437 QGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 GLTVS++M D EV LIF PGFSTAE +TDVSGRGVGMDVV+RNI+ +GG ++I+S G Sbjct: 481 NGLTVSDDMPDSEVWQLIFQPGFSTAEAITDVSGRGVGMDVVRRNIESIGGRIDIESSAG 540 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 G+ I LPLTLAI+DGM V V ++F++PL ++ES QP + L L G + VL +R Sbjct: 541 EGSAFFIHLPLTLAIVDGMCVSVGKQIFVIPLLNIIESFQPTKQQLKTL-GNDTVLYIRD 599 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +Y P+V L+ V A T+GIVV+L+S +R+ +LVD L+GQ QVV+K+LE +YRK Sbjct: 600 QYWPLVPLYDFMEVEDAALSPTEGIVVLLESSKKRFGVLVDALVGQQQVVIKSLEEHYRK 659 Query: 617 VPGISAATILGDGSVALIVDVSALQAIN 644 V GI+ ATI+GDG VALI+D ++ Sbjct: 660 VAGIAGATIMGDGKVALIIDADSIATTY 687 >UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae RepID=B7IHS6_THEAB Length = 680 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 220/684 (32%), Positives = 347/684 (50%), Gaps = 50/684 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M ++ F DE E + + LL L+ D E +N FRA H++KG AGT GF + Sbjct: 1 MSYEEYLSVFIDEVREYVQQLNDALLDLEKNPEDMEYINVAFRALHTLKGMAGTMGFENM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQ 121 + H MEN LD R G++ +++D ++ D++++ L+ + E + + Sbjct: 61 AKLCHRMENYLDAVRSGKVSIDSDKLDYLFNGLDLIEKMLEKIASEGSEEIDEDVSGLVE 120 Query: 122 ALRQLALEA----KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 +LA K P+ S + E + + + ++ E Sbjct: 121 IFEKLAQGENVGKKESKPAGTVETSQANNDSEKSESKKKPEKEADYMYEEDEALLHVVNE 180 Query: 178 E-----------------------------LGHLTTLTDVVKGADSLSAILPGDIAEDDI 208 G +++K S+ I + Sbjct: 181 AKKKGYDVIYTKVILAENVQLKSARMYMVFHGIEELGGEIIKSVPSVEDIENEKFDREVE 240 Query: 209 TAVLCFVIE--------ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE 260 V+ V A + + +I +K ++ EK Sbjct: 241 LYVIAKVEPLKLQEKLSAISEVEKVIVKKVEIKHKSEVKEKEKEETKEEKHEEKKKNVKI 300 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + ++RV +EK+D L+NL+GELVI +S + L N ++ S+ QL R DLQ Sbjct: 301 TQTVRVDIEKLDTLMNLMGELVIARSRIIDI---LKKYNIKEVDESLAQLSRITLDLQNI 357 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 VM +RM+P+ YVF+R+PR+VRD++ LGK++ + G TELD++ +E I DPL HL+RN Sbjct: 358 VMKVRMVPISYVFNRFPRMVRDISKNLGKEINFVMKGEDTELDRTFVEEIGDPLVHLIRN 417 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 +LDHGIE E+R+A GK VG LILSA H+G N+ IEV DDG GL+RE+IL KA +GL Sbjct: 418 ALDHGIETKEERIAKGKPPVGTLILSARHEGNNVVIEVEDDGRGLDREKILKKAIERGLV 477 Query: 441 V---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 + + D++V +F PGFST EQV+++SGRGVGMDVVK ++ + G V I+SK+G Sbjct: 478 DEVKASGLPDEKVYEFLFMPGFSTKEQVSELSGRGVGMDVVKNTVESLNGTVHIESKKGL 537 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + V+V ++ +P++ + +L ++ + E +++ RGE Sbjct: 538 GTKVIIKLPLTLAIIQALLVKVDKYIYAIPISVIDSTLIVLPDEIQMVQNKEVIVK-RGE 596 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +PI++LW V + + E + VV+++ R+Y + VD LIGQ +V+K+L + V Sbjct: 597 VIPIIKLWDVLGMKHNE-ELDELNVVVVKVANRKYGIAVDTLIGQEDIVIKSLGKLFADV 655 Query: 618 PGISAATILGDGSVALIVDVSALQ 641 S LGDGS+ALI+D L Sbjct: 656 KEFSGGATLGDGSIALIIDTLNLV 679 >UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXP0_9BACT Length = 606 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 228/644 (35%), Positives = 362/644 (56%), Gaps = 61/644 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F E+ + L +E +L L+ + + +N IFR HS KG AG G + Sbjct: 20 MDDPEIVKEFLTESGDHLESVESQILQLEENPDNTDIINTIFRPIHSTKGSAGFLGLKDM 79 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 +H +E LLDEAR+G +++ II + E DI++ + E S + + A Sbjct: 80 GTVSHELETLLDEARKGNLKITPLIIEILYEGVDILKRLRGLVAKKVEKIDVSDEIVDYA 139 Query: 123 LRQLALEAKGETPSAV-TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 P V + ++V + + S+ Q I++ + Sbjct: 140 ------------PVIVKIKNALVGQKATESAPSKPQHLGEILVEK--------------- 172 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 G+I EDD+ L + Q + V I T + A Sbjct: 173 -------------------GEITEDDLDKALEEQEKLQQKKIGEIIVEKGIVTKETIDSA 213 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 + P + S +++V ++K+D L+NLVGELVI +++ + ++ Sbjct: 214 LKTLPAT---------APVSETVKVDIQKIDSLVNLVGELVIANALIKDLLENTNSTSNK 264 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 + + L + +D+Q+ VMSIRM+P++ F + RLVRD++ K GK+V+L + G TE Sbjct: 265 N----ISHLGKIVKDIQDQVMSIRMVPIKSTFQKMSRLVRDVSKKAGKKVKLEVSGEETE 320 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDKS+IE I DPL H++RNS+DHGIE E+R+AAGK ++G++ L A H+GGNI IE+ DD Sbjct: 321 LDKSVIESIGDPLVHILRNSVDHGIEPEEERIAAGKPALGHVYLDAFHKGGNIFIEIRDD 380 Query: 422 GAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G GL ++++L KA +G+ +++ ++ LIFA GFSTAE++TD+SGRGVGMDVVK+ Sbjct: 381 GRGLRKDKLLKKAIEKGIMSENATLTEQQIFGLIFAAGFSTAEKITDISGRGVGMDVVKK 440 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+++ G VEI S++G GT I I LPLT+AI+DGM V+V ++ +I+P+ ++ ES++P++ Sbjct: 441 NIERLRGKVEISSEEGKGTKISIKLPLTMAIIDGMIVQVGNQKYIVPMLSIEESIRPKKD 500 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 D+ + V+ VRG LP+V L + +NV K + I++I++S G+R +LVD LI Sbjct: 501 DISTIQQRGEVINVRGNILPMVRLHQWYNVEPKKYAPWEAIILIVESEGQRCGILVDDLI 560 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 GQ Q+V+K L +R V G+S + ILGDG V LI+DV + + Sbjct: 561 GQQQIVIKRLGEQFRNVKGVSGSAILGDGRVGLILDVGGIMNLA 604 >UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Tax=Alphaproteobacteria RepID=B2IGA2_BEII9 Length = 747 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 247/714 (34%), Positives = 378/714 (52%), Gaps = 71/714 (9%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD + QTFF E +E LA++E LL +Q D E +NA+FRA HSIKGGAG F Sbjct: 1 MDAMMAIKQTFFQECEEQLAELENGLLAIQDGDKDPETVNAVFRAVHSIKGGAGAFSLDD 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L +H+ E LD+ R G + N D++ L D++ + + A + DA I + Sbjct: 61 LVRFSHVFETTLDDLRAGVLAPNADVLKTLLRAADMLADLVRAARDGGTVDAGRSQAIIE 120 Query: 122 ALRQLALEAKGETPSA-------------------------------VTRLSVVAKSEPQ 150 L L + + +P+ Sbjct: 121 DLAALTHGQAEGVSAETNDDDDGQAGFSFQPVQACLDDLDFDDFQNEPAETLFTIRFKPK 180 Query: 151 DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITA 210 + + ++L LK + + L L+++ L+ + D+ Sbjct: 181 PDLYAKANETALLLRGLKELGEMEVVCDASDLPLLSELDPEGAYLTFTITLLTQHDEAAV 240 Query: 211 VLCFVIEADQITFETVE-VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST------- 262 F +P + + + ++ + + ++ Sbjct: 241 RGIFEFVEWDCDLTIESCATPAAKSEVYADVTSPDLAAADAHQDISDKQKKAQIVHAEPV 300 Query: 263 -----------------------------SIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 +IRV +++VD+LI+LVGELVI Q+MLAQ + Sbjct: 301 SESDQGVIQPERREQERRESNTTAGLSPATIRVDLDRVDRLIDLVGELVINQAMLAQSVT 360 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 E ++ T + +L++ R++Q+SVM+IR P++ VF R PRLVR++A GK V L Sbjct: 361 EAGLARATNIATGLDELEQLTREIQDSVMAIRAQPVKSVFQRMPRLVREVAAMTGKSVRL 420 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 G +TE+DK++IER+ DPLTH++RN++DHG+E PEKRLAAGK G + L A H+ G Sbjct: 421 VTEGENTEVDKTVIERLTDPLTHMIRNAIDHGLETPEKRLAAGKPEEGTVHLCALHRSGR 480 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I IE+ DDGAG+NR R+ A +GL ++ ++DDE+ LIF PGFSTA ++D+SGRG Sbjct: 481 IVIEIADDGAGINRPRVKQIAIDKGLISADVTLTDDEIDNLIFLPGFSTAATISDISGRG 540 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV+R+IQ +GG + I S+ G G+T + LPLTLA+LDGM V VAD+ ++PL A++ Sbjct: 541 VGMDVVRRSIQALGGRISISSRPGQGSTFTMSLPLTLAVLDGMVVSVADQTLVVPLTAIV 600 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGRR 591 E+LQP+ D+H G RV+ +R ++ P++++ + + +V+++++ GG R Sbjct: 601 ETLQPKSTDVHGFGGAARVIAIRDQFTPLIDVGRELAYRRVPADPLASVVILVETEGGVR 660 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 ALLVD + GQ QVV+K+LE+NYR VPGI+AATILGDG VALI+DV ++ R Sbjct: 661 NALLVDAIQGQRQVVIKSLEANYRHVPGIAAATILGDGRVALILDVESIVTSAR 714 >UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Tax=Exiguobacterium RepID=B1YI82_EXIS2 Length = 663 Score = 599 bits (1546), Expect = e-170, Method: Composition-based stats. Identities = 227/672 (33%), Positives = 373/672 (55%), Gaps = 42/672 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++++ F DE+ E L + LL+ + D ++ IFR+AH++KG +GT G+ + Sbjct: 1 MDLNEYLGLFLDESIEHLQAINSSLLIFEQRLDDEAVIDQIFRSAHTLKGMSGTMGYDAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ------------- 109 + TH ME+ LD R ++I++ + ++ ++ Q Sbjct: 61 ADLTHEMESALDLVRSKTQPATPELIDVLFVAAEQLETMVEDISQGGTGKLDVTTTVIRL 120 Query: 110 ----EPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILS 165 +PD S +A + + + + V SVV +S Q+ + Sbjct: 121 KQFIDPDTESGKDTVKAAGTVMMNFECD----VYSESVVRQSMASGYQAYVITVELSADV 176 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLSA---------ILPGDIAEDDITAVLCFVI 216 LKA V ++ + L +L + +D L + +DI + V Sbjct: 177 ILKAARVYMVFDRLQNLGDVILSNPTSDELEQEQFETRFDVLFVTMKTAEDIQQEIKAVS 236 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN---ESTSIRVAVEKVDQ 273 E Q+ + EVS + + L E+ P E +T + + +IRV +E++D+ Sbjct: 237 EVAQVLIQPFEVSVEPAAAATLLEPVEETPAVNTSIETSTETQTPIAAKTIRVNLERIDR 296 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L+NL E +I + L + ++E V DL ++ +++R +LQ V+++RMMP+E VF Sbjct: 297 LMNLFEEFIIDRGRLERIAAE---VGSSDLTETVERIKRGTNELQSLVLTLRMMPIEQVF 353 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 +R+PR+VR ++ +GK ++L + G+ TELD+++I+ I DPL HL+RN++DHGIE R+ Sbjct: 354 NRFPRMVRSVSKDVGKNIKLHITGAETELDRTVIDEIGDPLVHLIRNAVDHGIESKADRI 413 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEV 450 +AGK GNL L A H G + IE+ DDGAG+N+ER+ A +GL E ++ +E Sbjct: 414 SAGKPVEGNLSLRAYHSGNRVFIEIEDDGAGINQERVTKIALEKGLLTEEEATLLTPEEA 473 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 AML+FAPGFSTAE VTD+SGRGVG+DVVK I+ +GG V +++K+G GT RI LPLTL+ Sbjct: 474 AMLLFAPGFSTAETVTDLSGRGVGLDVVKSKIESLGGEVFVETKRGEGTIFRISLPLTLS 533 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 I+ M V++ E + +PL A++E+ ++ D+ A E+V + RG+ +P++ L +V+ + Sbjct: 534 IISAMLVKLDQETYAIPLTAIIETTSLKQ-DVILQAHREKVFDFRGQLVPLISLNQVYGL 592 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + +A VV+++SG + L+V +LIGQ ++V+K L S + IS ATILGDG Sbjct: 593 PHVEADA--YSVVVVRSGEKLAGLMVSELIGQQEIVMKPLGSYLEGIRAISGATILGDGQ 650 Query: 631 VALIVDVSALQA 642 VALI+D +AL Sbjct: 651 VALIIDSNALLR 662 >UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GTW3_9BURK Length = 722 Score = 598 bits (1542), Expect = e-169, Method: Composition-based stats. Identities = 241/691 (34%), Positives = 356/691 (51%), Gaps = 56/691 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +D+ FF EA +LLA++E ++L L+ D E LNA FRAAH+IKG AG FG Sbjct: 3 FELDLDASRGIFFTEARQLLAEVESYVLQLEQNPNDTEVLNAAFRAAHTIKGSAGVFGLL 62 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY-- 118 V+ H +E +LD R E+ + ++ L LE +D + E +D + + + S D Sbjct: 63 VITHFVHDLETVLDRVRNSEIGFDANMSTLVLECRDHISELVDCIEAGGDAEHVSPDMAV 122 Query: 119 ----ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + L+ L+ +R V +E Q + R + + Sbjct: 123 AQAGLTARLKAYLLQEDQPDAIQPSRPLEVNNTE-QTWHVSVRLGRSTLCDGFDPAPIFS 181 Query: 175 LEEELGHLTTLTDVVKGADSL------------SAILPGDIAEDDITAVLCFVIEADQIT 222 E G L + V+ S D + I F+ E ++ Sbjct: 182 YMETYGELQAVIPVLDALPSFADLDAESCYLGFELRFVTDKGQAGIEDAFEFLTEESRVR 241 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREK-TTRSNE--------------------- 260 + +P+ V L A + +E R E Sbjct: 242 ILSHSCTPEQWDALVSALPEGAARAAELLQEAGFPRPQEEALPEVMEVTGNAVTTASGKS 301 Query: 261 ---------STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 S+ IRV +K+D LINLVGELVI + +++ L NH ++ S + Sbjct: 302 KATGKATPVSSFIRVPSDKLDALINLVGELVIANAGTVEQAKHL---NHTAMLESTSAVA 358 Query: 312 RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371 ++++ + +RM+ + F R+ R+VRD A LGKQ++L + G TELDKS++E+I Sbjct: 359 GLIEEIRDGALGLRMVQIGETFQRFQRVVRDTAMGLGKQIQLEISGEDTELDKSVVEKIG 418 Query: 372 DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431 DPL HLVRN+LDHG+E PE+R+AAGK + G L L+A H G+I IEV DDG GL RE+IL Sbjct: 419 DPLMHLVRNALDHGLETPEERVAAGKPATGRLQLNAYHDSGHIVIEVNDDGRGLAREKIL 478 Query: 432 AKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 KA +G+ + +SD EV MLIFAPGFSTA++VTD+SGRGVGMDVVKRNI+ + G V+ Sbjct: 479 KKAIEKGIVTPDQTLSDTEVNMLIFAPGFSTADKVTDISGRGVGMDVVKRNIEALRGSVQ 538 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 ++S+ G G T I LPLTLAI+DG + V V+++PL+ V E L+ L + Sbjct: 539 VRSRPGNGCTFEIRLPLTLAIIDGFMIGVGGSVYVIPLSYVRECLELPVDALGTEDRMDI 598 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 ++RGE+LP V L KVF+ + ++++ GG R ++ D L G+ Q V+K L Sbjct: 599 HYDLRGEFLPCVRLRKVFH--PNAKRPKRENIIVVSFGGVRAGIVADYLHGESQTVIKPL 656 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSALQ 641 + + + IS ATI+G+G VALI+DV L Sbjct: 657 GNLFEQNRAISGATIMGNGDVALIIDVPKLI 687 >UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKH2_9BACT Length = 670 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 219/675 (32%), Positives = 361/675 (53%), Gaps = 44/675 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+S + + DEA + L + + +L ++ + + ++ IFR AH++KG + T GF Sbjct: 1 MSTDMSQYLGAYLDEATDNLQQLNELILAVEQDRRSRDTIDEIFRTAHTLKGMSATMGFK 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E+ + R G+ L D I+ ++ D+MQ +DA + + Sbjct: 61 HMAELTHALEDRFSKVRSGDEDLTDDDIDHLFQSLDLMQSMVDAIRDGGTDQDTDISSLV 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII-----------LSRLKA 169 LR+ +E PS+V + + ++ Q+++ + + + LKA Sbjct: 121 AQLREENVE-----PSSVEKGTEESELSDQEKEWLVDATKMGLAVYKVKVLLDQECLLKA 175 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGD---------------------IAEDDI 208 ++ L + + D L ++E Sbjct: 176 ARAYMVVSRLEEMGEIVKCDPSVDDLEKEQFDHSFIVYIGTKDEADVVKNAVMSVSEVVE 235 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAV 268 T VL + +E + + E K + A+QA ++ S ++RV + Sbjct: 236 TEVLPWEVEKGETSEEVAVSDEKPAKAAAAPAQAKQADEAPKTKKAPKAKKTSQTVRVDI 295 Query: 269 EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 ++D L+NLVGELVI ++ + + E + + QL R + D+QE V +RM+P Sbjct: 296 GRLDSLMNLVGELVIGKARIERLVLE---SKLREFDEPLSQLGRISGDIQELVTKLRMVP 352 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 + ++F R+PRL+RD++ LGK VEL + G TELD+++I+ I DP+ HL+RNS+DHG+E+ Sbjct: 353 VSFIFDRFPRLIRDISKNLGKDVELVIEGQETELDRTVIDEIGDPMVHLIRNSVDHGVEI 412 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NM 445 PE R AGK + G + ++A +G ++ IEV DDG G++ + KA +G+ E M Sbjct: 413 PEIRKTAGKPAQGTIRIAAYQEGNSVIIEVADDGKGIDPVAVGKKAVERGMVTEEALAEM 472 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 SDDE+ +F PGFS A++VTD+SGRGVGMD VKR ++ +GG E++SK G GT + I L Sbjct: 473 SDDEIIQFVFLPGFSMAKEVTDLSGRGVGMDAVKRKVEALGGQFEVRSKVGEGTNVYIRL 532 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLAI+ + VRV +E + +PL V E++ RE D+ + G L +RGE L + +L Sbjct: 533 PLTLAIVLALLVRVGNETYAIPLENVDETILVREEDMKRMHGRPVTL-LRGEVLTLGDLA 591 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 + E + VV++++G + +VD L+GQ ++V+K+L K+ GI+ ATI Sbjct: 592 STLDAVRDDEERNEYPVVVVRAGRNKIGFVVDALVGQQEIVIKSLGRLLSKIKGIAGATI 651 Query: 626 LGDGSVALIVDVSAL 640 LGDG+VALI+DV++L Sbjct: 652 LGDGNVALILDVASL 666 >UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V496_9FIRM Length = 679 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 216/684 (31%), Positives = 365/684 (53%), Gaps = 50/684 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F DE+ E L + + LL L+ + +N IFR AH++KG + T GF+ + Sbjct: 1 MD-NQYMDMFLDESHEHLQSLNEGLLRLEENMEEISAVNDIFRNAHTLKGMSATMGFAKI 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME++LD R+ +++LN DI++ + D +++ +D+ + D + Sbjct: 60 AELTHEMEDVLDLVRKEQLKLNEDIMDTLFKCLDSLEQMVDSVGNGEAEDVVDVSDLVAK 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG------EVDLLE 176 L ++ +A + + A + ++ +AG +V L+E Sbjct: 120 LSSISKGTPAPAEAAPSAAAAPAADGASSDLGIDDIDIDVMKKAKEAGMNIFHVKVTLME 179 Query: 177 EELGHLTTLTDVVKGADS----LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + V+ D + ++ P + E + V+ A E V+ + Sbjct: 180 SCVLKAARSVMVMHALDEVGDVIKSVPPAEDLEQEKFEHSFDVVIATSADTEAVKNAVDT 239 Query: 233 STPPVLKLAAEQAPTGRVER-------------------------------EKTTRSNES 261 + E P ++ + ++S Sbjct: 240 VSEIEDIGVEELDPDALGKQIEPAPAQTAPAAAPAAKKPAAPAKKAGAKSAPAAKKPHQS 299 Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 S+RV +EK+D L+NL+GELVI + L Q DL+ ++ Q+ R DLQ V Sbjct: 300 QSVRVDIEKLDTLMNLMGELVINKVRLEQIGQTH---RMSDLMETLEQMDRVTGDLQNIV 356 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M +RM+P+ VF+R+PR+VRD++ +LGK++ LT+ G TELD+++I+ I DP+ HL+RNS Sbjct: 357 MKVRMVPVSAVFNRFPRMVRDVSKELGKEINLTIEGEETELDRTVIDEIGDPIMHLLRNS 416 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 LDHG+E P+ R A GK+ VG + L A H+G N+ I +TDDGAG++ ++I KA +G+ Sbjct: 417 LDHGVESPDAREAKGKSRVGEVGLIARHEGNNVVIMITDDGAGIDADKIRRKAVEKGMIS 476 Query: 442 ---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 ++++ D + LIF PGFSTAEQ+TD+SGRGVGMDVV+ I+ + GHV++++ G Sbjct: 477 QSEADSLDDADAVRLIFLPGFSTAEQITDISGRGVGMDVVRSKIEALSGHVDVETHIDEG 536 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 + +I LPLTLAI+ M VRV +E++ +PL ++ ++ D+ + E V+ +RGE Sbjct: 537 SIFKIKLPLTLAIIQAMLVRVQEEMYAIPLTSIDSTINIEPTDIQTVQNKE-VIVLRGEI 595 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 +PI+ + + V K ++ + VV++ +G + ++VD LIGQ ++V+K L + + + Sbjct: 596 IPIIRMEEALQVPHTK-DSDEHFVVVVHAGEAKAGIVVDNLIGQQEIVIKTLGNLFAGLK 654 Query: 619 GISAATILGDGSVALIVDVSALQA 642 AT+LGDG VALI+DV+ + Sbjct: 655 LFGGATVLGDGRVALILDVATMIQ 678 >UniRef50_C6HWL4 Putative signal transduction histidine kinase (CheA) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWL4_9BACT Length = 671 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 206/651 (31%), Positives = 334/651 (51%), Gaps = 22/651 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + ++ + Q F EA E+L ++ + L+ D LN IFR AHSIKG AG G + Sbjct: 7 NDEMKEIVQDFLQEATEMLEGLDNFFVQLENNPEDKTLLNEIFRTAHSIKGSAGFIGLTR 66 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + E H EN+L++ R G M+ +I++ LE D ++ ++ K ++ D + I Sbjct: 67 IVEVAHHAENVLNQLRSGNMRAEPAVIDIILEAMDALKVLVNEVKTGEQAD-VDIEGINM 125 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 L L + + + + Sbjct: 126 KLDLLLQWGEDTGSGEGAKEEPAGDEMAAAVREEQAIDKVASSGSSSPSSPSSPSSPSPG 185 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + + V + + T Sbjct: 186 APETPAPPPPPAAAAPPASPPPPPPPSHPVASPPPSGAPGPQRVTPAASREETQGGEAQG 245 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV--- 298 A G ++ +IRV + ++D ++NLVGELV+ ++ L + S ++D V Sbjct: 246 ARVGEAGEADQ----------TIRVEISRLDSVMNLVGELVLGRNRLVKLSGDVDGVVDF 295 Query: 299 --NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 ++ ++ QL R DLQ +V+ RM P++ V ++PR+VRDL+ K+GK + L LV Sbjct: 296 EQRIKEVAEAISQLNRVTTDLQTAVIKTRMQPIKKVLGKFPRMVRDLSRKMGKSIRLELV 355 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TELDKS+IE I DPL H++RNS+DHGIELP+ R++ GK+ G + +SA +G +I I Sbjct: 356 GEETELDKSVIEEIGDPLVHIIRNSIDHGIELPDDRVSHGKDPEGVVRISAYQEGNSIVI 415 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 E+ DDG G++ E++ KA +G+ E+ M+D E +IF PGFSTA++VTDVSGRGV Sbjct: 416 EINDDGRGIDVEKVKRKAVERGIITEEDSRRMTDAEAVNIIFLPGFSTADKVTDVSGRGV 475 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVV+ NI K+ G V++ +++G+G+T I LPLT+AI+ + V + E + +PL +V+E Sbjct: 476 GMDVVRTNISKINGSVDVTTQKGSGSTFTIRLPLTIAIIQALMVTIHPETYAIPLASVVE 535 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG--IVVILQSGGRR 591 +++ E D+ ++G E VL +R + LP++ L F V +T VV++Q G + Sbjct: 536 TVKITEKDIKTISGSE-VLNLRQQVLPLIRLRDEFKVPQEETGGAPPGSYVVVVQIGSKN 594 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+VD+L Q +VV+K++ + G++ ATI GDG V +I+DV + Sbjct: 595 LGLVVDRLPYQEEVVIKSMGPLLAGIRGLAGATITGDGKVVIILDVGEILQ 645 >UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=8 Tax=Pseudomonas RepID=Q4ZYC8_PSEU2 Length = 705 Score = 594 bits (1532), Expect = e-168, Method: Composition-based stats. Identities = 238/690 (34%), Positives = 363/690 (52%), Gaps = 54/690 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++ QTF EA ELL ME+ LL L+ E D + + A+FRAAH+IKG AG FG + Sbjct: 1 MSINLDQAQQTFIVEARELLQAMEESLLQLESEPGDLDAIGAVFRAAHTIKGSAGLFGLT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY----KQSQEPDAASF 116 + TH++E++LD R G + +N ++I + L++ D M E +D +Q Q+P Sbjct: 61 PIVSFTHIVEDVLDRLREGSVSVNAELIAVLLKSGDHMLELIDVVASRGEQLQQPALERE 120 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + QAL+ A + V + D + + R + L Sbjct: 121 AALRQALQVFQAPASASAADIASAQVVSDDEQSADVLWHISLRFGVDVFRNGMDPLSFLR 180 Query: 177 --EELGHLTTLTDVVKGADSLSAILPGDIA------------EDDITAVLCFVIEADQIT 222 LG + +T + ++ A P I V FV E + Sbjct: 181 YLNTLGQMVQVTTLTDSIPTVEAWDPESCHLGFEIDFRSAAGHAAINEVFDFVREDCAVE 240 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTG-----------------------------RVERE 253 ++ +P P +L ++ + R Sbjct: 241 ITPLDETPDHVEPTGTELVSQPEHSPVVASGELLGDQRAVPRTPATATATATAVERPSSG 300 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 ++ + +RV +K+D+LINLVGELVI + + + D + L + + Sbjct: 301 SEQKNKDGRYVRVNADKLDELINLVGELVIASAGASLLAKSCD---NDPLQEASSTVSGL 357 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 + + + +RM+P+ F+R+ R+VRD++ +LGK ++L + G+ TELDK+++E+I DP Sbjct: 358 VEQILDGALHLRMIPIGDTFNRFRRVVRDVSQELGKDIDLIINGAETELDKTVVEKIGDP 417 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HL+RNS+DHGIE E R AAGK + G+L L+A H G+I IE+ DDGAGLNRERIL K Sbjct: 418 LMHLLRNSMDHGIESAEARRAAGKPAKGHLSLNAYHDSGSIVIEIADDGAGLNRERILDK 477 Query: 434 AASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +GL + +++D E+ LIF PGFSTAE VT++SGRGVGMDVVKRNI + G V++ Sbjct: 478 AQQRGLVAAGASLTDQEIYNLIFEPGFSTAEAVTNLSGRGVGMDVVKRNITLLRGTVDLD 537 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT +RI LPLTLAI++G V + +++PL+ V E ++ E + L L Sbjct: 538 SQPGQGTIVRIRLPLTLAIINGFLVGIDQSTYVIPLDMVQECIELDEHN-RQLTRDSGYL 596 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 ++RGE LP+V L FN G VV+++ + L+VD L+G+ Q V+K L Sbjct: 597 DLRGEVLPLVYLRDHFNHEGPAARRQN--VVVVRYAEHKAGLVVDDLLGEFQTVIKPLGK 654 Query: 613 NYRKVPGISAATILGDGSVALIVDVSALQA 642 + + GIS +TILG G+VALI+D+ AL Sbjct: 655 LFGALRGISGSTILGSGAVALILDIPALLN 684 >UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTS1_DESHD Length = 729 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 242/712 (33%), Positives = 374/712 (52%), Gaps = 73/712 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 +D+ +F + ++ E + + LL L+ E + +N +FR+AHS+KG +GT GF+ + Sbjct: 11 VDLGEFLDFYLLDSQEQIEKLAAGLLQLEKEGNNVGLINDLFRSAHSLKGASGTMGFTSI 70 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH E+LLD R+G+M+++ ++++ L D ++E L ++ E A D + + Sbjct: 71 VALTHSAEDLLDRLRQGKMEVSLPMVDVLLAVTDRVKEMLSQVEKRVEITAEYQDLVDEM 130 Query: 123 LRQLALEAKGETPSA------------VTRLSVVAKSEPQDEQSRSQS------------ 158 + E A TR+ E ++ SQ Sbjct: 131 RALMNGETPAPVKEADSNDMKENLTSNYTRVDFQLSLEVAEQVKSSQDMGHGVYQVDIKF 190 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD-----SLSAILPGDIAEDDITAVLC 213 ++ ++A E LG + L V+ + + ++ D ++I + Sbjct: 191 APNTLMRAVRAVMAVQRMENLGKVVKLRPSVEELEVGSEEGFAMLILSDDPPEEIRGEIL 250 Query: 214 FVIEADQITFETVEVSPKISTPPVLK----------LAAEQAPTGRVEREKTT------- 256 V E ++ + + + E AP+ V E Sbjct: 251 LVSELAEVEVHPYRIGDAVDGYGSEEVAAAQAAELLPVVEAAPSLPVRPEAKPVQAAPVI 310 Query: 257 --------------------RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 +N+ +IRV ++D LINLVGE+VIT++ L Q EL Sbjct: 311 PAAPAAPKPAAGNGNNAATDGNNQVHTIRVDTVRMDNLINLVGEMVITRTRLVQIGHELK 370 Query: 297 PVNHGD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 D L + L R DLQES M +RM+P+ VFSR+PRLVRDLA K K++ Sbjct: 371 EQYRMDALVNNLNETTVYLGRLMSDLQESAMRLRMVPIGTVFSRFPRLVRDLARKTQKEM 430 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 EL L G TELDK+++E I DPL HL+RNS+DHGIE PE+R AAGK +G + L A H+G Sbjct: 431 ELVLRGEDTELDKTVVEVIGDPLMHLIRNSVDHGIETPEERRAAGKPELGTITLDAYHEG 490 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 +I I ++DDG GL+ RI KA S+GL E +S+ ++A LIF PGFSTA++VTD+SG Sbjct: 491 NHIAILISDDGKGLDLNRIYEKALSRGLVGEREGLSERDIANLIFLPGFSTADKVTDISG 550 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVK+ + +GG ++I ++QG GTT I LPLTLAI+ + V V+ E++ +PL++ Sbjct: 551 RGVGMDVVKKALNNLGGMIDITTRQGQGTTFTIRLPLTLAIIQALLVEVSTEIYAVPLSS 610 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 V+E+L D+ + GG ++++RG LP++ L F + + EA + VV++ G + Sbjct: 611 VLETLLVERKDIKNV-GGLPMVQLRGNTLPLISLRDKFELPAPEAEAEEVFVVVVGLGDK 669 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+VD L GQ +VV+K+L +PGI+ ATILGDG V LI+D+ +L Sbjct: 670 ALGLIVDGLRGQQEVVIKSLGDFLNNLPGIAGATILGDGKVTLILDIGSLIQ 721 >UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5B1_PELCD Length = 887 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 230/652 (35%), Positives = 354/652 (54%), Gaps = 15/652 (2%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M M IS + + F EADELL ++EQ LL + DAE + ++R HS KG +G F F Sbjct: 244 MQMLISPEMLERFVQEADELLQNVEQGLLAWSDDKLDAEGIAELYRNVHSFKGNSGFFSF 303 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 +++ TH ME LLD A+ G N L D ++ + Q + D + Sbjct: 304 GDMEKLTHQMETLLDIAKEGGEFSNGSPAEALLGCLDALRGAVADISQGGKGVIEEVDEL 363 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L + ET + + + + ++ ++ + +G L E + Sbjct: 364 LKQLVRYVPTEDAETTPEDSEPARIPEDCLRESAVPAEDLGEDDDTSSASGSRLLGEILV 423 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 + ++ E+ + ++E ++ E + + +I Sbjct: 424 EEGLADEGEI-----------AEVIEEQRKPLGELLVERGKVGPEQLAKALEIQKQSGQA 472 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 ++ + + + IRV + K+D LINL+GE+VI ++ML RS +L+ + Sbjct: 473 KSSGGTNGAAMPSKGKPPAMNRQDIRVDLAKLDDLINLIGEMVIAENMLL-RSPDLEGLE 531 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 + + Q+ + RDLQE M IRM+P+ +F R RLV DL+ K GK+V+L L G Sbjct: 532 LDNFSKAAQQMSKIVRDLQEMAMIIRMIPVSGLFRRMIRLVHDLSVKSGKKVDLQLFGQE 591 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TE+DK++IE+I DPL HL+RNSLDHG+E P +RLAAGK G + LSA HQ G + IEV Sbjct: 592 TEVDKTVIEQITDPLVHLLRNSLDHGLETPAERLAAGKPEKGVVKLSARHQEGEVWIEVQ 651 Query: 420 DDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDG GLNR++IL+KA +GL + ++SD E+ LIF PGFSTA++VTDVSGRGVGMDV Sbjct: 652 DDGRGLNRDKILSKAIGKGLVAGDGSHLSDKEIYNLIFQPGFSTADKVTDVSGRGVGMDV 711 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK+N++K+ G +E+QS G G+ I + +PLTLAI+DGM VR+ + I+PL A+ E +P Sbjct: 712 VKKNLEKIKGKIEVQSTPGQGSRITLRIPLTLAIIDGMLVRIGESRCIVPLLAIREIFRP 771 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 D+ + G+ + +VR + P+V L ++ G++++L+ + LLVD Sbjct: 772 TTDDITVMPDGQELAKVRESFHPVVYLDRLLEEPADYNAIEDGVLIVLEYQDKFLCLLVD 831 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 +++GQ Q V+K L V S TILG+G V LI+DV+ L + QR Sbjct: 832 EILGQQQTVIKGLSDYIGNVRIASGCTILGNGEVCLILDVATLVDEHVGQRR 883 Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 4/159 (2%) Query: 34 APDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLE 93 E +NAIFR HS+KG AG + + H E+LLD R G++Q+ + + + Sbjct: 98 NGHGETMNAIFRLFHSMKGSAGFLELNHIAHVAHAAESLLDMIRSGKIQMIPEHVQFLCQ 157 Query: 94 TKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSV--VAKSEPQD 151 + D +E +D +Q E + + + +L +A + S + S ++ Sbjct: 158 SCDFAKEAMDHVEQ--ELNDQGMEEAANHISELLAKAAEDALSRIEHASTDGAEQAAVAA 215 Query: 152 EQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK 190 E + + P AG ++L + ++++ Sbjct: 216 ESNDAAEPNDAAEPNEDAGLEADDFDDLMQMLISPEMLE 254 >UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Tax=Geobacter RepID=C6E9E2_GEOSM Length = 604 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 224/651 (34%), Positives = 349/651 (53%), Gaps = 62/651 (9%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M++D + + F E ELL ++ L+ L+ DAE +N IFR+ H++KG + G Sbjct: 1 MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F +L + TH E++L+ R+GE+ LN +I+++ LE D+++ + K + Sbjct: 61 FDMLVKVTHKTEDVLNRLRKGELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGT 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I + + L+ A T A T S K S + Sbjct: 121 ISKLIPFLSENATEATVLAPTSASKEEKGATPPPPPESVA-------------------- 160 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 D + A + P D A Q E + +PK Sbjct: 161 --------DTAQEATAREESAPADTGASKAAAAAPAAQPKPQPVKEPQKPAPKGEELA-- 210 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE---- 294 +++++RV V+++D L+N VGELV+ ++ + Q S+ Sbjct: 211 ---------------------DNSTVRVDVKRLDDLMNQVGELVLERNRMIQLHSDYQTG 249 Query: 295 LDPVNHGD-LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 LDP GD +L +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L Sbjct: 250 LDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDL 309 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 ++G TELD+S+++ I DPL HL+RN+LDHG+E P++RLAAGK+ G ++LSA H+G Sbjct: 310 VIIGEETELDRSVVDEIGDPLIHLIRNALDHGLETPDQRLAAGKDRTGTVVLSAAHEGNQ 369 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSG 470 I I + DDG G++ ERI KA +GL E M + E+ L+F PGFST EQ TD+SG Sbjct: 370 IVISIKDDGRGIDPERISKKALEKGLVTDEQLASMGNREILDLLFLPGFSTKEQTTDLSG 429 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVV+ NI+K+ G +EI++ G GT + LPLTLAI+ + V V EV+ +PL + Sbjct: 430 RGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKEVYSIPLAS 489 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 V+E+++ +++ H + GG+ VL++R LP++ L + F+ T+ VVI+ + Sbjct: 490 VIETMRVSKSEFHMI-GGQEVLKLRDSVLPLLRLQQTFSCQEYYTDRDTCYVVIVGVAEK 548 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 R L+V +L+GQ +V +K+L +PGI +TI+GDG VALIVD L Sbjct: 549 RIGLIVTRLLGQQEVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPMGLI 599 >UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=2 Tax=Deltaproteobacteria RepID=Q1NT42_9DELT Length = 804 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 230/644 (35%), Positives = 349/644 (54%), Gaps = 42/644 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F DEA E L +E H+L L+ D + +N IFR H+IKG +G + + + Sbjct: 191 ELLGGFLDEAFEHLESIEVHVLELEQNPDDLDSINNIFRPFHTIKGVSGFLNLMTINKLS 250 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY--ICQALR 124 H ENLLD+ R G+ +++D+I+L L D +++ ++ K E + I L Sbjct: 251 HATENLLDDVRNGKRPMDSDVIDLVLTVGDTLRQMVENIKDVLENGVERYQEFDISSQLE 310 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + +G++P A + VA P + + Sbjct: 311 HIKALQEGKSPEAPPPEAPVADEGPNAQPVAVPAD------------------------- 345 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 AD P D A + P Sbjct: 346 -------ADPTVGGAPADAAVQPAAEPAAAPAGPTPSQQPPTPTPRPAAKPAGQDREEAA 398 Query: 245 APTGRVEREKTTRSNEST----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 TG ++ T + + SI+V +EK+D L+N VGELVI QS L +++ + + Sbjct: 399 PATGPGAGDRDTAAAQKKKFGASIKVDIEKLDSLVNAVGELVIMQS-LVRQNPLISKIAD 457 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 L+ QL R DLQ + MS+RM+P++ F + RLVRDLA K GK+V+L + G+ T Sbjct: 458 PKLLKDFSQLGRITSDLQRTAMSMRMVPIKQTFDKMIRLVRDLAKKSGKKVDLVMEGADT 517 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+D+++++ I DPL H++RNS+DHGI+ PE+R GK G + L A +GGN+ IE+ D Sbjct: 518 EIDRNMVDSIYDPLVHMMRNSVDHGIQPPEERAKHGKPPTGKVYLRAYQKGGNMVIEIED 577 Query: 421 DGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG GL+ +I KA S+GL ENMSD ++ LIF PGFSTA+Q+TDVSGRGVGMDVVK Sbjct: 578 DGEGLSSAKIRKKAESRGLIQSGENMSDFDLNNLIFMPGFSTADQITDVSGRGVGMDVVK 637 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 + ++K+ G VE+ S+ G G+ I LPLTLAI+DG+ VRV E +I+P A+ ES++P Sbjct: 638 KAVEKLRGKVEVNSEAGKGSLFTIRLPLTLAIIDGIIVRVGTERYIIPTIAIQESMRPER 697 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK-TEATQGIVVILQSGGRRYALLVDQ 598 + + + G L +RG +PIV L+++F + T+ +GIVV++++ GR ALLVD+ Sbjct: 698 KNYNTVHGRGESLLIRGHLVPIVRLYELFGLDDPSVTDPCEGIVVVVENEGRLRALLVDE 757 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+G+ +VV+KNL + G++ TILGDG V LI+D++ + A Sbjct: 758 LLGKEEVVIKNLGGM-SDIRGVAGGTILGDGRVGLILDLAGIIA 800 >UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Tax=Clostridia RepID=B1I5I0_DESAP Length = 701 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 234/685 (34%), Positives = 356/685 (51%), Gaps = 51/685 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S+ Q F DE DE + + L L+ E + E + IFRAAH+IKG +G G+ + Sbjct: 4 SEEIQVFLDELDEKIEILNDGFLALEREGDNPETIQEIFRAAHTIKGSSGILGYDQMSAL 63 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH MENLL R G + ++++ LE D ++ D + + + + + LR+ Sbjct: 64 THEMENLLTLLREGRVHSTPRMVDVLLEALDTLKLLRDKVIGGTDREIDTGP-VMEKLRE 122 Query: 126 LALEAKGETPSAV--------------------TRLSVVAKSEPQDEQSRSQSPRRIILS 165 + E A V+ ++ Q + Sbjct: 123 FCEQESAEVGDAGATGAGAAAGSEGAAGLVVTDAHWEVLREAVDQGYSAYRVRVDIDPGC 182 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADS----------LSAILPGDIAEDDITAVLCFV 215 ++K+ L+ + L + ++ + D + L + Sbjct: 183 QMKSVRAFLVFQTLEKAGVQVIQSEPPVEDLEQGNYGAGFELLVLSEEDADRLQGALSLI 242 Query: 216 IEADQITFETVEVSPKI--------STPPVLKLAAEQAPTGRVEREKTTRSNES--TSIR 265 E +T V V + TP AA AP RVE+ + +++ ++R Sbjct: 243 AEVSAVTVTPVAVLEEAGGDTITPAHTPGGTSTAAGPAPAARVEQFDSLNAHKKAIRTVR 302 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQLQRNARDLQES 320 + V+K+D L+NLVGELVI ++ L + + ++ + L L + DLQE Sbjct: 303 IDVQKLDSLMNLVGELVIERTRLERFADIMELKYRSEEMIDTLNEISSHLGQITSDLQEE 362 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 +M RM+P+ VF+R+PR+VRDLA KLGK+V L + G TELD+++IE I DPL HL+RN Sbjct: 363 IMMARMLPIAQVFNRFPRMVRDLAQKLGKEVNLVIEGRDTELDRNVIEIISDPLVHLIRN 422 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHG+E+PE+RL GK G L L A HQ +I I V DDG GL+ +R+ A+A L Sbjct: 423 AVDHGLEMPEERLGFGKPRAGTLTLRAFHQENHIVIIVEDDGRGLDPDRLRARAREMQLL 482 Query: 441 VSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 E ++D + LIF GFSTA V+D+SGRGVGMDVVK I+++ G VE++S G Sbjct: 483 DEETLARLTDQDALNLIFQAGFSTAADVSDISGRGVGMDVVKSQIEQINGLVEMRSTPGQ 542 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + V + + V+ PL V+E++Q A++ + E V+ VRGE Sbjct: 543 GTAVTIKLPLTLAIIRALMVELGNYVYAFPLANVVETMQIDPAEIRMIRDAE-VVVVRGE 601 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 LP+V L ++F E + VVI+ +G R ++VD+L+G+ ++V+K+L ++ Sbjct: 602 VLPLVRLRRLFRQRETDPE-GRLYVVIIGTGQDRVGVVVDRLVGEQEIVIKSLGDLLGRI 660 Query: 618 PGISAATILGDGSVALIVDVSALQA 642 PGIS ATILGDG VALIVDV AL A Sbjct: 661 PGISGATILGDGKVALIVDVRALLA 685 >UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 Length = 692 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 208/700 (29%), Positives = 358/700 (51%), Gaps = 69/700 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD S + F +EA + L + + LL L+ E + +++N IFR AH++KG A T GF+ + Sbjct: 1 MDTSQYMSMFLEEAMDNLQILNESLLQLEQEPHNIDKVNEIFRVAHTLKGMAATMGFNEV 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME++L R G++++ D++ + + D +++ + + E + I + Sbjct: 61 GELTHKMEDVLSRFRDGKLKVTQDVVTVLFKCLDTLEQMIKNIEDGVE-EEVPIKGIIEE 119 Query: 123 LRQLALEAKGETPSAVTR-------------------------LSVVAKSEPQDEQSRSQ 157 L +A + ++VV ++ + S Sbjct: 120 LENIANLQNDDKEKESKEDIQEEKQNDSAKGTKNIQVELNEYDINVVKQARDKGFNSYQI 179 Query: 158 SPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS---------AILPGDIAEDDI 208 + LK+ V L+ + L + + V + L E+ + Sbjct: 180 RVTISENTLLKSARVFLIFKSLEEMGEIIKSVPNTEDLENENFDFEVDLTFVTTSDENKV 239 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES------- 261 L + E ++++ E +++ + +K + +++E +++ + Sbjct: 240 YENLMNISEVEEVSIEKIDIEAEKIKKMQIKDKQSEQIKSIIQKEASSKVEDIKPKPALV 299 Query: 262 --------------------TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 S+RV +E++D+ +N+V ELVI ++ L Q SS Sbjct: 300 PDKDKGNKKAAKKEPHKKVHQSVRVDLERLDKFMNMVSELVINRTRLEQISSNY---KLN 356 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L ++ Q+ R DLQ+ VM IRM+P++ VF+R+PR++RDL+ +L K++EL + G+ TE Sbjct: 357 ELNETLEQVARTTSDLQDLVMKIRMLPLDTVFNRFPRMIRDLSVELDKEMELVIEGADTE 416 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+++I+ I +PL HL+RN+ DHGIE E+R++ GKN VG + L A +G I+V DD Sbjct: 417 LDRTVIDEIGEPLIHLIRNAADHGIESKEERISKGKNPVGKISLIAYQEGTKAVIKVVDD 476 Query: 422 GAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 G+G+ +++ KA + G+ E MSD++V LIF GFST +VTD+SGRGVGMDVVK Sbjct: 477 GSGIPVDKVREKAENMGINT-EGMSDNDVRNLIFLQGFSTNTEVTDISGRGVGMDVVKTK 535 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I +GG V++ S++ G+ I LPLTL I+ + V V +E + L+ V + +E D Sbjct: 536 ISALGGTVDVVSEKNEGSAFVIRLPLTLQIIQVLLVGVGNETMAISLSYVDRVIDYKE-D 594 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 L + + V+ G + +V L+ V +K + +VI++ G + L+VD L+G Sbjct: 595 LIKMTNNKEVIIYNGNVISLVRLYDKLRVEKSKN--NKNYIVIVKVGEKTVGLMVDSLLG 652 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 Q ++V+K L + + ATILGDG V LI+DV+AL Sbjct: 653 QREMVIKPLGKTLQNLKEYMGATILGDGLVTLILDVAALV 692 >UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Tax=Zymomonas mobilis RepID=C8WD70_ZYMMN Length = 776 Score = 591 bits (1525), Expect = e-167, Method: Composition-based stats. Identities = 267/770 (34%), Positives = 401/770 (52%), Gaps = 131/770 (17%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D + FF E +E LA+ME + + D E +N IFRA HSIKGGAG FGF Sbjct: 1 MSFD--EIQNIFFQECEEGLANMEACFSLCRDGVQDDETINTIFRAVHSIKGGAGAFGFE 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY--KQSQEPDAASFDY 118 L+ H E LLD+ R G + L D+++ + D++ + + A ++ D+ D Sbjct: 59 QLRSFAHHYETLLDKLRNGVLTLTPDLLSTLMAAFDMLSDHVAAASGERDMPDDSGIMDR 118 Query: 119 ICQALRQ------------------------------------------LALEAKGETPS 136 + A+ + +L+A ET Sbjct: 119 LTAAMEEGGGEPPSSAAEAPAETPPEPEAPAEEDSVPDIDGDFDFDDLLTSLDAPAETED 178 Query: 137 AVTRLSVVAKS---------------------EPQDEQSRSQSPRRIILSRLKAGEVDLL 175 + +P + S ++L L + +++ Sbjct: 179 KKEPEAATPVEEEKIEESDEEDNAPKSWLLWFKPDRHALDNGSDPLLLLRELDSLGAEIV 238 Query: 176 EEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCFVIEADQ------------- 220 + L TL D+ L LP D+ E+DI +V FV + + Sbjct: 239 ATDYQELPTLEDINPEISYLGWWVRLPADVEEEDIRSVFEFVGDISEVVLIRKGDKNQKM 298 Query: 221 -ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES------------------ 261 E + P LA +AP G E K + Sbjct: 299 PPLPEKAALKPVTDQSEKEALAKIEAPKGDKETTKAAEKPAAKTPPASKPTAKVEAAKKP 358 Query: 262 -------------------------TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 +IRV ++K+D+L+NLVGELVITQ+MLAQR ++ Sbjct: 359 AAPAPAAAPTKAPPQPPRSAAPAMAQTIRVDLDKLDRLVNLVGELVITQAMLAQRLTDQG 418 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 +L L R+LQ+S MSIR PM+ VFSR PR++R+L G+ GK+V L ++ Sbjct: 419 LSGSSELTD----LDHLTRELQDSAMSIRAQPMKTVFSRVPRIIRELEGETGKKVRLDVI 474 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TE+DK+++ERI +PLTHL+RN++DHG+E PE+R+AAGK G + L+AEH+ G I I Sbjct: 475 GEMTEVDKTVVERIGEPLTHLIRNAVDHGLETPEERVAAGKPQEGVVTLAAEHRSGRIII 534 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 ++DDG G+NR RIL KA +G+ + +SDD++ LIFAPGFSTA +VT+VSGRGVGM Sbjct: 535 RISDDGKGMNRARILEKAIEKGIVSPDQTLSDDDIDNLIFAPGFSTAAKVTNVSGRGVGM 594 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVV++N+Q +GG + I S+ G G+T + LPLTLA+LDGM V+V D+ F++PL ++ESL Sbjct: 595 DVVRKNVQALGGRISINSRPGFGSTFTLSLPLTLAVLDGMIVQVGDQTFVIPLGHIVESL 654 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALL 595 QP E ++ + E++L VRG Y+PI + + +V A+ + + ++++++S G + L+ Sbjct: 655 QPNEGEISGIGTTEKLLNVRGAYVPIQSIGRELSVENAELDPFKSVLIVVESDGGQAVLM 714 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 VDQ++ Q QVVVK+LE+NY+ + G++ ATILGDG VALI+DV +L A R Sbjct: 715 VDQILDQRQVVVKSLEANYQAIAGLAGATILGDGRVALILDVDSLVARWR 764 >UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A0_THEAS Length = 679 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 212/681 (31%), Positives = 348/681 (51%), Gaps = 46/681 (6%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD+S + F DEA + L ++ + LL + D +N IFR AH+ KG + T GF Sbjct: 3 NMDMSQYIGAFLDEATDQLKNLNELLLAAEQNQSDMGIINEIFRVAHTFKGMSATMGFDS 62 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + TH ME+LL AR GE LN++ ++L + D + +D + + + Sbjct: 63 MAGLTHAMEDLLGLARSGEHVLNSEDVDLLFKCLDAITAMVDNIRGGGSDKDVDVKALVE 122 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR-----------LKAG 170 L +L +A + ++ + Q+ ++ + + LKA Sbjct: 123 QLHRLVNKAHEAPAAKPAKVGKKVELTEQERGWVKEARHQGMAVYELRVALSPSCMLKAA 182 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLS---------AILPGDIAEDDITAVLCFVIEADQI 221 ++ LG + L G + L + + +++V + E + Sbjct: 183 RAYMVVTRLGEMGELIKTQPGVEDLEREAFDTEFWVYVATHETGEALSSVASSISEVASV 242 Query: 222 TFETVEVSPK----ISTPPVLKLAAEQAPTGRVE-------------REKTTRSNESTSI 264 + I + EQ+ +G + + S ++ Sbjct: 243 EVTPLNFDEDGGLSIGDMEDDEDEEEQSSSGTPQVSQGQQPQAGAAQAPQQGSKKGSRTV 302 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV + ++D+L+NLVGELVI ++ + + + E + QL R + ++QE V + Sbjct: 303 RVDIGRLDKLMNLVGELVIGRARIERLAQE---TKIKAFDEPLSQLGRISGEIQELVTKL 359 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF R PRLVRDL+ ++GK+V L + G TELD+++I+ I DP+ HL+RNSLDH Sbjct: 360 RMVPVSMVFDRLPRLVRDLSRQMGKEVRLVVEGRETELDRTVIDEIGDPMVHLLRNSLDH 419 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 G+E PE+R GK G + ++A +G + IEV DDG G++ ++ KA +G+ +E Sbjct: 420 GLESPEERERNGKPREGTITVAAYQEGNGVIIEVQDDGRGIDTAKVRRKAVERGIVTAEQ 479 Query: 445 ---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 M+D+E LI PGFSTA+ VTD+SGRGVGMD VK ++ +GG ++ SK G GT + Sbjct: 480 AQMMTDEEAIRLILLPGFSTADVVTDLSGRGVGMDAVKSKVESLGGQFQVFSKLGEGTRV 539 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAI+ + +RV DE++ + L V E+L ++++ + G V VRGE L + Sbjct: 540 VIRLPLTLAIVLALLIRVGDEIYAISLENVEETLLVPKSEIKYVH-GTPVTTVRGEILTL 598 Query: 562 VELWKVFNVAGAKT--EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 +L + + + E +VV + R +VD +GQ ++V+K L +KV G Sbjct: 599 SDLAGILSTPVDREGVEEHPVVVVRVGRDRNRIGFVVDDFVGQQEIVIKPLGKLLQKVRG 658 Query: 620 ISAATILGDGSVALIVDVSAL 640 ++ ATILGDG+VALI+D ++L Sbjct: 659 VAGATILGDGNVALILDAASL 679 >UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=2 Tax=Verrucomicrobia RepID=B5JQF9_9BACT Length = 921 Score = 590 bits (1522), Expect = e-167, Method: Composition-based stats. Identities = 219/653 (33%), Positives = 357/653 (54%), Gaps = 71/653 (10%) Query: 1 MSMDISD---FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF 57 M +++ + Q F EA++ L +E +L L+ + + +N++FR+ H+IKG AG Sbjct: 331 MDLNMEENEELLQEFHTEANDHLGQIETAVLDLEKDVTSRDAINSMFRSFHTIKGVAGFL 390 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD 117 + H +E+L+D R ++ + T II+L L KD + +Q++ + Sbjct: 391 NLVPVNRLAHEVESLMDLVRNDKLGVFTGIIDLVLAAKDTITKQIEQITE---------- 440 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + G+TP+ V ++S Sbjct: 441 ----------ALSNGKTPTEVIKVS----------------------------------- 455 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 L + G+ + T +E + E + PV Sbjct: 456 ---ELMARARWAMEGPEVYGRKTGESSAVIATPEAEAPVELESDAPE----ASTTPAAPV 508 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 ++ A E + R+ E+ +IRV K+D L+++VGELVI QS L + S + + Sbjct: 509 VQSAEEIEKDAKNAAAAKRRAAENATIRVNTIKLDNLMDMVGELVIVQSQLLESSRQTEG 568 Query: 298 VNHGD----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 L +M QL R ++LQ + M++RM+P++ F + R++RD+ K GK+V Sbjct: 569 NGTAGGDSVLQRNMSQLTRITKELQHTSMALRMIPVKPTFQKMGRIIRDIGAKCGKKVRF 628 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGG 412 G TELD++++E I DPL H+VRN+LDHG+E +R AAGK+ G + L A HQG Sbjct: 629 ETFGEDTELDRNVVEEIGDPLVHMVRNALDHGLEADAAERQAAGKDETGYIALKAYHQGS 688 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 NI IE++DDG G++ +R+L KA S G+ + +S++E+ LIFAPGFSTAEQ+TD+SGR Sbjct: 689 NIVIELSDDGRGIDPDRVLKKAISNGIVSENDQLSNEEIYKLIFAPGFSTAEQITDISGR 748 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVV++NI+K+ G +EI+S+ G G+T RILLPLT+AI+DG+ VRV ++ FILP +V Sbjct: 749 GVGMDVVRKNIEKLRGKIEIESELGKGSTFRILLPLTMAIVDGLVVRVGEDRFILPTTSV 808 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 +L+P E L + G + +L +RG+ +P+ L + F + GA +E VV++++ G+ Sbjct: 809 KVALRPDENVLAKVQGNQEILNIRGQVIPLFRLHQHFAIPGAISEPKDATVVVVETAGKP 868 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 LLVD ++ + +VV+K+L + +PG+S ILGDG++ALI+D ++L ++ Sbjct: 869 CGLLVDDMVSKQEVVIKSLGGMMQGIPGVSGGAILGDGTIALILDPASLISVA 921 >UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0K1_DESRD Length = 871 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 221/643 (34%), Positives = 340/643 (52%), Gaps = 54/643 (8%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F EA E +++LL L+ + + + + A+FRA H+IKG G + + E Sbjct: 275 EITGEFISEAQEHFEIADENLLTLESDPDNLDAVAAVFRAFHTIKGTCGFLDLTPIAELA 334 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H ENLLDE R+ + ++++ D++++ + +++ A Sbjct: 335 HKAENLLDEVRKENLTFRGEVVDATFSALDMLKKMVGQLEEALGAGAEYVPD-------- 386 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 PS V + Q + + +P Sbjct: 387 --------PSLRQTFDFVNRIRQQPQAAAPSAPS-------------------------- 412 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 P + + VSP Sbjct: 413 ---------PQAAPSTPEPASSEPESSAPAAPEPAPAASAGVSPSPEPSSAQPEPETAPA 463 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 G + ++++ +++D L++ +GELVI +S++ Q +L + L + Sbjct: 464 QGEPRKNGQKGMQIKQTMKIDADRIDLLLDTIGELVIIESIVTQ-DEKLSDLASPQLERN 522 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + QL + R LQ+ MS+RM+P+E F R RLVRDL K GK+VEL +VG TELDK++ Sbjct: 523 LAQLTKITRSLQDMGMSMRMVPIETTFRRMARLVRDLGKKSGKKVELEMVGKETELDKAM 582 Query: 367 IERIIDPLTHLVRNSLDHGIEL-PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +E++ DPL H++RN++DHGIE PE R+AAGK++ G + L A H+GG+I I + DDG GL Sbjct: 583 VEKLGDPLVHMIRNAVDHGIEPTPEDRVAAGKSAEGRIWLKAFHEGGSIHIVIEDDGRGL 642 Query: 426 NRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 NRE I AKA +G+ S N MSD+E+ LIFAPGFSTA QVTDVSGRGVGMDVVK NI+ Sbjct: 643 NREAIAAKAVERGIIESANGMSDEEIYGLIFAPGFSTAAQVTDVSGRGVGMDVVKSNIEN 702 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G++ I+S G GTT ++LPLT+AI+DGM ++V E +ILPL ++++S QP + + Sbjct: 703 LRGNIRIRSTPGEGTTFTLVLPLTMAIIDGMQIKVGSERYILPLLSIIQSFQPTKEMVAT 762 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 + G L RG LP+ L ++F V A+T+ TQ I V+++ GGR+ ALLVD+L+GQ+Q Sbjct: 763 VVGKGETLPFRGRLLPLFRLSELFGVDDAETDPTQAIAVVVEDGGRQVALLVDELLGQNQ 822 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 V+K+L + G+S A+IL DG+ LI+DV+ + + Q Sbjct: 823 TVIKSLGEAMGSIRGVSGASILSDGTPGLIIDVNGVVRMATNQ 865 Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 53/310 (17%), Positives = 103/310 (33%), Gaps = 32/310 (10%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + + + + L D+E+++L + D + L+A+ R H+ KG AG G + E Sbjct: 127 EIFAAYIAQQESALGDLEEYILEYEK-HHDTDNLDAVRRLVHTAKGEAGVMGLGSIAEVC 185 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E D + ++ + L KD Q ++A ++ A + Sbjct: 186 HGLE---DYIQDQGQAISP---DTLLAFKDWFQSAVEACRR-----DAHLPDTAAVMGLF 234 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 E + + PSA + + + I GE ++ Sbjct: 235 TNEGEVQGPSAGAEGAASPAAPAAEASDDPLLQPVPISDPEITGEF---------ISEAQ 285 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + + AD L D D A + + T ++++P + Sbjct: 286 EHFEIADENLLTLESDPDNLDAVAAVFRAFHTIKGTCGFLDLTPIAELAHKAENL----- 340 Query: 247 TGRVEREKTTRSNESTSIRVAV--EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 V +E T E V +D L +VG+L A+ + D + Sbjct: 341 LDEVRKENLTFRGEV----VDATFSALDMLKKMVGQLEEALGAGAEYVPDPSLRQTFDFV 396 Query: 305 TSMGQLQRNA 314 + Q + A Sbjct: 397 NRIRQQPQAA 406 >UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Tax=Aquificales RepID=B4U6X8_HYDS0 Length = 687 Score = 587 bits (1515), Expect = e-166, Method: Composition-based stats. Identities = 226/683 (33%), Positives = 363/683 (53%), Gaps = 54/683 (7%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + ++ F EA E L +E LL L+ + + E LN+ FR H+IKGGAG G + Sbjct: 5 EMREIFEEFLVEARENLEKLETDLLELEKDPTNQEILNSAFRVMHTIKGGAGFLGLDPIV 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYICQ 121 ET H E++L + R E ++ I +L L+ D ++E L+ + +E PD + Sbjct: 65 ETAHKAEDILGKLRNAEFIISPAINDLLLKAADKIKEYLEKAENQEELEPDNELLSQLED 124 Query: 122 ALRQLALEAKGET----PSAVTRLSVVAKSEPQDEQ-------SRSQSPRRIIL-----S 165 L+ + T + V+ SV +K + Q S P +L Sbjct: 125 VLKNPDKYSDKYTTINKSATVSDQSVSSKEKEAKPQIGEKNFEESSDDPVSRLLKKYGFE 184 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPG--------------DIAEDDI-TA 210 L ++ + EEL + L A++ G +IA+D I T+ Sbjct: 185 HLIGKSIEEILEELVLMPPSERPEGLIQELDALINGTSSKSTAESSKKEEEIAKDKIATS 244 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 + F + + +VS I PP AA+ + +EK E +R+ V+K Sbjct: 245 MPRFTSQMEAQVDAGAQVSHGIVEPPKQAGAADTHSRTQPPKEKE----EEKVLRIDVQK 300 Query: 271 VDQLINLVGELVITQSMLA-------QRSSELDPVNHG--DLITSMGQLQRNARDLQESV 321 ++ L+NLVGELV+ ++ L Q +SE + G DL + + + R DLQ +V Sbjct: 301 IEVLMNLVGELVLDRNRLVKVVSTIMQSASENNEQIKGLDDLESVLSSIDRIVGDLQVAV 360 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M RM P++ +F ++PR+VRDLA L KQ+EL G TE+DKS++E++ +PL H++RNS Sbjct: 361 MKTRMQPVKRLFQKFPRVVRDLAKLLNKQIELVTEGEDTEMDKSVLEKLEEPLIHIIRNS 420 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE PE+R GK G + L A +QG I + + DDG G++ +++ KA +G+ Sbjct: 421 VDHGIESPEERELLGKPRNGIIKLKAYYQGDRIIMVIEDDGRGIDIDKVKRKALEKGIIS 480 Query: 442 S---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 E M++ EV LIF PGFSTA+QV++VSGRGVGMDVV + G ++I++++G G Sbjct: 481 QDRLEKMTEKEVLSLIFHPGFSTADQVSEVSGRGVGMDVVMTTVMNFRGTIDIETQKGKG 540 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 T + + PLT+ I+ + V + + F +P+ +V+E +Q A + ++ GE VL +R Sbjct: 541 TKVTMAFPLTVGIIRALMVSIGNRNFAIPIYSVLEIIQQENATITTVS-GEDVLILREST 599 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 +P+V L V + +K G V+I Q G +R + V++L G ++VVK L + +V Sbjct: 600 IPLVNLADVLGIRNSKI----GYVIISQLGNQRVSFTVEELYGDEEIVVKPLGKIFGEVE 655 Query: 619 GISAATILGDGSVALIVDVSALQ 641 GIS ATI GDG+V LI+D++ + Sbjct: 656 GISGATITGDGNVVLILDLAGIL 678 >UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC94_HELMI Length = 691 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 212/692 (30%), Positives = 343/692 (49%), Gaps = 46/692 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F+ EA E L + + LL ++ + E ++ +FRAAH++KG + GF + E Sbjct: 1 MDQYMDLFYSEAKEQLDILTRDLLAIESGSSSQEMIHEMFRAAHTLKGSSAMVGFPAVTE 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E+LL + R G+ L+ I+L + D +Q L + ++ Sbjct: 61 MTHKVEDLLGKVREGKHILSAKDIDLVFQALDYIQNCLFHPEAVDSAKTEELARKLADIQ 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR----LKAGEVDLLEEELG 180 A G +V + + + ++ ++ R +++ L+ L Sbjct: 121 DQPAPANGPADDSVAKRTAQLAELRSRGTYKGKATEILVTFRPECAMRSVRFFLILNNLK 180 Query: 181 HLTTLTDVVKGADSLSA----ILPGDIAEDD-------------ITAVLCFVIEADQITF 223 + V + A I D + V C I + Sbjct: 181 EFGEVIGSVPAWSEMEANENAYEEASILLDWRQGSRNDLERALNVADVRCIEIRSGDDGN 240 Query: 224 ETVEVSPKISTPPVLKLAAE----------------QAPTGRVEREKTTRSNESTSIRVA 267 E P L A E + P + + + + I++ Sbjct: 241 EAFSAVGAAEPPTALPAATEVTVAKAAAGYRGTEAVKTPAADLASQGDSSHRPTEYIKIE 300 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVM 322 ++D L+NL+GE++I+Q+ ++ ++ QL R LQ+ +M Sbjct: 301 ANRLDLLMNLIGEMLISQARFSRIQENYLERHGQTPLAVEMAEETHQLARITTQLQDGLM 360 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 R++P+ VFSR+PR+VRDLA K GK+V L + G TELDK++++ I DP+ HL+RNS+ Sbjct: 361 KARLVPIGGVFSRFPRIVRDLARKQGKKVNLMMEGQDTELDKTVVDLIGDPIMHLIRNSV 420 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIELPE R AGK G + L A H+G I +E+ DDG G++ ++LAK + GL Sbjct: 421 DHGIELPEARRQAGKPEEGTIRLKATHEGSRIVVEIGDDGRGIDESKVLAKGRALGLIPE 480 Query: 443 -ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 + S E+ LIFAPGFSTAE+VTD+SGRGVGMDVVKR I + G ++IQS+ G GT Sbjct: 481 GQTPSRQEILDLIFAPGFSTAEKVTDISGRGVGMDVVKRAISSLHGIIDIQSEPGQGTAF 540 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 ++ LP+TLAI+ G+ VRV E I+PL+ V+ES Q + ++ + GG V VRG +P+ Sbjct: 541 QLQLPITLAIIQGLIVRVERESLIIPLDNVLESFQLQNKEVQSV-GGREVFSVRGRIVPL 599 Query: 562 VELWKVFNVAGAKTEATQGI--VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 L + + + + VV++ RR L VD LIG+ ++V+K +++ + + Sbjct: 600 YRLQDLLQIPLDPEKGRRKYRSVVMVGLAERRMGLEVDSLIGKKEIVIKPIKAPWLNLEH 659 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRMAN 651 + ATILGDG V+LI+++ A+ +R+ N Sbjct: 660 FAGATILGDGRVSLILNIGAIFRRGAGERLQN 691 >UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HM7_THICR Length = 650 Score = 587 bits (1514), Expect = e-166, Method: Composition-based stats. Identities = 212/654 (32%), Positives = 344/654 (52%), Gaps = 16/654 (2%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + Q F EA EL+ +++ L+ L+ D++ LNAIFR H+IKGGAG G + L Sbjct: 1 MD-EEILQDFLVEASELVEQLDEQLVELENSPSDSDLLNAIFRGFHTIKGGAGFLGVTPL 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E H EN+ D+ R G+++ ++ ++ + D++ + + + + + Sbjct: 60 IEVCHRAENVFDKIRNGDVEYDSTAADVIMRAFDVITDYIQQLNDGARELEEADEGLLSE 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL--LEEELG 180 L L P A S P+ E P I ++ Sbjct: 120 LDALWKGGATPQP-ASEPAQEEMTSHPKLELPEGVDPDGEISDDEFEALLNQRDALSGSD 178 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITA------VLCFVIEADQITFETVEVSPKIST 234 + T+ VK A GDI +D+ A +L + E + T +P+ Sbjct: 179 SSESETEEVKLALPDDVDPDGDITDDEFEALLNQRDMLEGIQEPQETVSATPPPAPETVK 238 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 P +++ + E + + +++RV ++D+++NLVGELV+ ++ L S Sbjct: 239 PTPPPAPKKESKPETPKPEASKAATAESTVRVDTRRLDEIMNLVGELVLVRNRLLTLRSS 298 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 P L ++G L DLQ SVM RM P++ VF R+PR+VRDLA KLGK++EL Sbjct: 299 DGP--EEALSNAVGNLDHVTTDLQASVMKTRMQPVKKVFGRFPRVVRDLARKLGKEIELE 356 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 L G T+LDK+L+E + DPL HLVRNS+DHG+E+P+ R AGK G +IL+AE +G +I Sbjct: 357 LKGEETDLDKNLVEALADPLVHLVRNSVDHGVEMPDVREQAGKPRKGTVILAAEQEGDHI 416 Query: 415 CIEVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 + +TDDG G++ + + KA +G+ + + D LI + GFSTA+Q++D+SGR Sbjct: 417 LLSITDDGKGMDPDVLRRKAVEKGMMDEVSANQLDDKAAFELIMSAGFSTADQISDISGR 476 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVVK I K+ G ++I S G GT I+I +PLTLAIL + V D+ + +PL +V Sbjct: 477 GVGMDVVKSMITKLNGSIDINSVLGEGTQIKIRVPLTLAILPTLMVSFEDDSYAIPLTSV 536 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 E + ++ + G+ ++ +R + +P++ L K V+I+ G +R Sbjct: 537 QEIFDYDASQINRI-DGQMMVRLREKSIPLLFLSDWLAPDQVKENYEGDKVIIVSIGNQR 595 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 L+V+Q+ GQ +VV+K L + + G + ATI G+G++ALI+D+ + + Sbjct: 596 AGLVVEQVNGQEEVVIKPLGVMMKHLEGYAGATITGNGNIALILDLPGVIQRFQ 649 >UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GR06_THISH Length = 691 Score = 587 bits (1513), Expect = e-166, Method: Composition-based stats. Identities = 217/694 (31%), Positives = 349/694 (50%), Gaps = 51/694 (7%) Query: 1 MSMD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D + Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MSLDSDDEILQDFLVEAGELLEGLSEQLVELERNPTDRDLLNAVFRSFHTIKGGAGFLNL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + L H E++ + R+G+ Q++ +++ L+ D++ + EP A + + Sbjct: 61 THLVAVCHRAEDVFNVLRQGQRQVDGALMDAVLQVLDVVNRMFGEIRGGVEPGPADPELL 120 Query: 120 CQ----------ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + A + + + P + + +L +++ Sbjct: 121 TRLESMTGPADAAPAPSPVAEAPPPAPEPAPPVSASPAVPAGDGDITDEEFEALLDAMQS 180 Query: 170 G----------------------EVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAE 205 G E + L +EL K + S+ P I+E Sbjct: 181 GGSAPALAAAPAASHKSDEITEDEFESLLDELHGKGNAPVESKASPPAAGSSADPDLISE 240 Query: 206 DDITAVLCFVIEADQIT--------FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTR 257 D+ +L + + AA A + Sbjct: 241 DEFEHLLDELHGKGKAPVVASAKAAPAAAAPPAAKPAAAPAPAAAPAAAPAAATPATQAQ 300 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 TS+RV +++D ++NLVGELV+ ++ LA S++ + + ++ L DL Sbjct: 301 PAAETSVRVDTKRLDDIMNLVGELVLVRNRLATLRSKM---SDEQVAKAVSNLDIVTADL 357 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q +VM RM P++ VF R+PR+VRDLA L K+++L L G T+LDK+L+E + DPL HL Sbjct: 358 QAAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLVHL 417 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN++DHGIE PE+R+AAGK+ G+++LSAE +G +I + + DDG G++ + + AKA + Sbjct: 418 VRNAVDHGIESPEERVAAGKSRTGHVVLSAEQEGDHILLTIADDGKGMDPDVLRAKAVEK 477 Query: 438 GLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 GL ++ M+D + +IF GFST E ++D+SGRGVGMDVVK I ++ G +EI SK Sbjct: 478 GLMDEDAAQRMTDQDAFNVIFMAGFSTKEAISDISGRGVGMDVVKTRIAQLNGTIEIDSK 537 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 +G G+T+RI +PLTLAIL + V + ++ F LPL V E + + + + V+ V Sbjct: 538 KGQGSTLRIKVPLTLAILPTLMVVLGNQRFALPLANVSEIFDLDLSRTNHVDD-QEVIMV 596 Query: 555 RGEYLPIVELWKVFNVAGAKT-EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 R + LP+ L + + A VV++ G RR +VD LIGQ +VV+K L ++ Sbjct: 597 RNQALPLYYLRRWLARSDAPKVNRETQHVVVVFVGNRRVGFVVDSLIGQEEVVIKPLGAS 656 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +PG + ATI GDG +ALI+DV +L + Sbjct: 657 LHGLPGFAGATITGDGGIALILDVPSLLKAYARR 690 >UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Tax=Chromatiales RepID=B9ZR99_9GAMM Length = 715 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 219/717 (30%), Positives = 337/717 (47%), Gaps = 70/717 (9%) Query: 1 MSMDI-SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M++D + Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MAIDPNDEILQDFLIEAGELLEGLNEQLIDLEQHPDDRDLLNAVFRSFHTIKGGAGFLSL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E++ + R GE Q++ +++ L D + + +P A D + Sbjct: 61 DPLVTVCHHAEDVFNLLRNGERQVDGHLMDTMLRVLDTLNVMFGDLRSGVDPTPAEAD-L 119 Query: 120 CQALRQLALE---AKGETPSAVTRLSVV--------------AKSEPQDEQSRSQSPRRI 162 + LR++A A P AV + + + S Sbjct: 120 VEDLRRMAKNEDVAGNSEPDAVATPDESPEPEPEPAPPAEVETTAMAAGDAAGEDSGLVG 179 Query: 163 ILSRLKAGEVDLLEEEL------------------------------------GHLTTLT 186 + E + L + L L + Sbjct: 180 ADDEITDDEFEALLDSLHGDGSPQAAQDSATSSNADAGSPSTDSDAAGPSGDEEDLISDD 239 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + D L A G A ++ + E + PP + + A Sbjct: 240 EFENLLDELQARGDGPPASAAPAPAAAESSTQEEPSVEPEAAASAAQEPPASEAKPQAAK 299 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 S+RV E++D+++NLVGELV+ ++ L+ ++ +L + Sbjct: 300 PAAAAAGARQAPQGEASVRVNTERLDEIMNLVGELVLVRNRLSMLRTQH---VDDELGKA 356 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + L DLQ SVM RM P+ VF+R+PR++RDL+ LGK++EL + G T+LDK+L Sbjct: 357 ISSLALVTSDLQTSVMKTRMQPVNKVFNRFPRVIRDLSRSLGKEIELEIFGEDTDLDKNL 416 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E + DPL HLVRN++DHGIE PE R AGK G ++L A +G +I + + DDG G++ Sbjct: 417 VEALSDPLVHLVRNAVDHGIETPEVREKAGKPRKGTVVLGAAQEGDHIALLIKDDGGGMD 476 Query: 427 RERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + K +GL E M+D E +IF GFST +++DVSGRGVGMDVVK I Sbjct: 477 PHALRRKVVEKGLMEPAMAERMTDREAFNVIFMAGFSTKTEISDVSGRGVGMDVVKTKIS 536 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++ G +EI S+ G GTT+R+ LPLTLAIL + V + F +PL +V E L H Sbjct: 537 QLNGTIEIDSEIGVGTTLRVKLPLTLAILPALMVILDGRRFAIPLASVSEILDLDLTKTH 596 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 + + V+ VR + LP+ L + + VV++ + R+ L+VD L+GQ Sbjct: 597 YVDD-QEVIVVRNQALPVHYLKRWLKPGFVPEAKAESHVVVVHTADRKVGLVVDDLVGQE 655 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI--------NREQRMANT 652 +VV+K L N + V G++ ATI GDG +ALI+DV+ L + R +R A T Sbjct: 656 EVVIKPLGQNLQGVKGLAGATITGDGGIALILDVADLVGLLTHKIPSAGRTRRPAQT 712 >UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepID=Q3BR62_XANC5 Length = 669 Score = 586 bits (1511), Expect = e-165, Method: Composition-based stats. Identities = 245/680 (36%), Positives = 363/680 (53%), Gaps = 40/680 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ QTF E+ +LL DME+HLL + P + +NAIFRAAH+IKG G F L Sbjct: 1 MDMNQLMQTFLAESRDLLEDMERHLLEAERGEPSPDAVNAIFRAAHTIKGSGGLFDLPQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH++E++LD R + L++++I L L D + ++ D + + Sbjct: 61 VGFTHVVESVLDLVRDEALSLSSELIGLLLVCCDHIHALVETAADPSHADPVALAAEAEP 120 Query: 123 LRQ-----LALEAKGETPSAVTRLSVVAKSEP--------QDEQSRSQSPRRIILSRLKA 169 L L A G T +AV + + +S D SP ++I + Sbjct: 121 LLAQLQTYLQRSACGVTAAAVAQGAPEKQSGYWRITLKLFADALRFGNSPLKLIRNLRSL 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIEADQITFETVE 227 G V+ + ++ L D+ A+ L +L D I V FV E + +V Sbjct: 181 GSVESITTDISQLPAFDDLDPEANYLGFQILLRSDADRAAIEEVFEFVREDCDLEIVSVP 240 Query: 228 VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS-------------IRVAVEKVDQL 274 + + AA P + + S + IRV +K+D++ Sbjct: 241 APSDAAELLSAEAAASPTPNKPLAAVPSAASAPGRAAPDAAARSADARSIRVDADKLDRM 300 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 I+LVGEL+I ++ S+ L+ S L D++ES + +RM+ + FS Sbjct: 301 IDLVGELIIA---VSSTSANAQRTGDAQLLESASILAGLVEDVRESALQLRMVKIGGTFS 357 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+ R+V D+A +LGK + L + G TELDKS++E+I DPLTHLVRN++DHGIE E R+A Sbjct: 358 RFQRVVHDVARELGKDIALVVAGEDTELDKSVVEKIGDPLTHLVRNAMDHGIEPAEVRVA 417 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAML 453 GK + G + L+A H G+I I++TDDG GLNR+RILAKA +GL +SD +V + Sbjct: 418 RGKPARGTVGLNAYHDSGSIVIQITDDGGGLNRDRILAKALERGLIEPGRQLSDRDVFAM 477 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFSTAE+VT++SGRGVGMDVVKRNI + G VEI S G GTTI + LPLTLAI++ Sbjct: 478 IFEPGFSTAEKVTNLSGRGVGMDVVKRNITALRGTVEIDSTAGVGTTISVRLPLTLAIIN 537 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 G V V VF++PL+ V E ++ +++RG LP V L ++F + G Sbjct: 538 GFQVGVGKSVFVVPLDVVEECVEFTPD------YASDYIDLRGSVLPYVRLRELFALGGK 591 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 +V+++ G +R+ L+VD L+G+ Q V+K L + +V GIS ++ILG G VAL Sbjct: 592 TPSRE--SIVVIRQGAQRFGLVVDTLLGEWQTVIKPLSKVFAQVKGISGSSILGSGDVAL 649 Query: 634 IVDVSALQAINREQRMANTA 653 I+DV +L + A A Sbjct: 650 ILDVPSLIQQLHPNQDALAA 669 >UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Tax=Clostridium RepID=A6M113_CLOB8 Length = 718 Score = 586 bits (1510), Expect = e-165, Method: Composition-based stats. Identities = 226/697 (32%), Positives = 367/697 (52%), Gaps = 59/697 (8%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + F DE +E + +EQ +L L+ + ++ + IFR AH++KG + G+ ++ Sbjct: 6 EMPEMVSAFLDEVEEQIQLLEQGILELEKKDEVSKVIQDIFRVAHTLKGSSSAMGYEKMK 65 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH MEN+LD+ R M++ IIN+ E D + + + + D I L Sbjct: 66 SLTHEMENVLDKIRNNFMEVTKPIINVLFECTDCLTLLKRDFIEYKNDTEVDIDDIIGKL 125 Query: 124 RQLA------------LEAKGETPSAVTRLSVVAKSEPQDE---QSRSQSPRRIILSRLK 168 R + + K E V +V + + ++ + R ++ +K Sbjct: 126 RCIQSIDVDKTEVNQFMGVKREISHEVDNKRIVFELDDDKRYTIENEKINGRSCVVCEIK 185 Query: 169 AGEVDLLEE-----ELGHLTTLTDVVKGADSLSAILPGDIA-----------------ED 206 E L++ L L + +V+ + ++ +L D E Sbjct: 186 ISEDSLMKATRAFLILNLLNDMGEVIGSSPNVLELLDEDENITTIKYLLISELGIKELES 245 Query: 207 DITAVLCFVIEADQITFET------------VEVSPKISTPPVLKLAAEQAPTGRVEREK 254 I L V +A+ +E +E KI V E +V +E Sbjct: 246 RIKHELMDVDDANVFDYEFTKLDKEKIDTKDIENIAKIEGEIVTDKIDEINGKKKVIQEI 305 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQ 309 S +IRV +E+++ ++NLVGE+VI Q+ +AQ S+ L + DLI + Sbjct: 306 KNEKKLSQTIRVDIERLEHMMNLVGEMVIEQTRIAQVSNTLHNKYIADDSVEDLIGISSR 365 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 + R +LQES+M RM+P++ +FSR+PRLVRDLA LGK+VEL L G TE+D+++IE Sbjct: 366 VSRVVSELQESIMKARMVPVQQLFSRFPRLVRDLANSLGKEVELVLEGGETEMDRTIIED 425 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 I DPL HLVRNSLDHGIE P R+ K S G L + A HQ ++ + + DDGAGLN E+ Sbjct: 426 ITDPLIHLVRNSLDHGIEKPSTRIVKDKPSKGTLRIKAFHQENHVIVTIEDDGAGLNLEK 485 Query: 430 ILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 I A + + +E +S+ E+ LIF G STA V+DVSGRGVGMD+V+ +I K+ Sbjct: 486 IKQSAIKKEVISAQEAETLSEQEIINLIFQTGLSTANNVSDVSGRGVGMDIVRNHIDKLN 545 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G +++++K+G G+ I LPLTLAIL G+ V++ +E++ LP++ ++E ++ + ++ + Sbjct: 546 GIIDVETKEGEGSKFTIKLPLTLAILAGLLVKIHNEIYALPMSNIIEIVRKPKNEIEYIK 605 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 + V+ +R + P+V L F + + + +V+L +R+ ++VD+L+G ++V Sbjct: 606 N-QSVVVIRDKVHPLVWLHDYFKLPR-ENKKRNIFIVVLGIAEKRFGVVVDELVGNQEIV 663 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 VK L S K+ GIS ATILGDGSVA I DV + + Sbjct: 664 VKPLGSYIGKIEGISGATILGDGSVAHIFDVVGISRM 700 >UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobacteria RepID=Q3IDZ4_PSEHT Length = 725 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 231/724 (31%), Positives = 357/724 (49%), Gaps = 88/724 (12%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS ++ D Q F EA E+L + + L+ L+ D E LNAIFR H++KGGAG Sbjct: 1 MSFEVDEDILQDFLVEAGEILELLSEQLVELENNPEDTELLNAIFRGFHTVKGGAGFLAM 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 S L + H EN+ D R+ +N++++++ L+ D + E K ++P+ A + Sbjct: 61 SELVDACHGAENVFDLLRQKVRTVNSELMDVILQALDTINEMFATIKNREQPEPADP-QL 119 Query: 120 CQALRQLALEAK-----GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + L +L L G+T + V +P +P + +D Sbjct: 120 LEILHKLGLPPTEEELGGDTIAPVITQDANLDDDPFAFDELFDAPSAATNATANDAHIDE 179 Query: 175 LEEEL-------GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI----------- 216 + E+ H +K + S S+ L GDI +D+ ++L + Sbjct: 180 ISEDEFENLLDELHGKGKGPAIKESLSNSSDLSGDITDDEFDSLLDELHGVGSFGAVNKT 239 Query: 217 ------------------EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT--- 255 D+ E+ K + P + AA AP +V K Sbjct: 240 PKPQAAQSPAASTNDDEISDDEFEALLDELHGKGAAPKSKESAATPAPVNKVTAPKAAVV 299 Query: 256 ----------------------------------TRSNESTSIRVAVEKVDQLINLVGEL 281 + T++RV +++DQ++N+VGEL Sbjct: 300 KSSPVAVDKVKQPQAAVVAASANTNTAAPVAKKAPPAQAETTVRVDTKRLDQIMNMVGEL 359 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 V+ ++ L ++ + + ++ L DLQ +VM RM P++ VF R+PR+VR Sbjct: 360 VLVRNRLVSLATSSES---ESMSKAISNLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVR 416 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DLA L K + L LVG T+LDK+L+E + DPL HLVRNS+DHGIE+P+ R AAGK G Sbjct: 417 DLARTLNKDINLLLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPDDREAAGKPRTG 476 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPG 458 + LSA QG +I + + DDGAG++ E++ A +G+ E +S+ E LIFAPG Sbjct: 477 TVTLSASQQGDHILLTIKDDGAGMDAEKLKQIAIKKGVLDQEQASRLSNTEAYNLIFAPG 536 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FST E ++D+SGRGVGMDVVK I ++ G V I+S+ G GT + I +PLTLAIL + V Sbjct: 537 FSTKEAISDISGRGVGMDVVKTKITQLNGSVSIESELGVGTILEIKVPLTLAILPTLMVV 596 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF-NVAGAKTEA 577 V+++ F LPL V E + G+ + VR + +P+ L A + Sbjct: 597 VSEQTFALPLAGVSEIFNLDLTK-TNVVDGQLTIIVRKKAVPLFYLEHWLVKGADRTSRK 655 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 QG VVI+Q G ++ +VD LIGQ +VV+K L++ + PG++ ATI DG +ALI+DV Sbjct: 656 AQGHVVIVQIGTQQVGFVVDSLIGQEEVVIKPLDALLQGTPGMAGATITSDGGIALILDV 715 Query: 638 SALQ 641 ++ Sbjct: 716 PSML 719 >UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P4M6_VIBME Length = 712 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 234/695 (33%), Positives = 358/695 (51%), Gaps = 69/695 (9%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDA--EQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 +T++ E+ ELL ME LL L+ E+LNAIFRAAH++KG AG F + T Sbjct: 9 LETYYTESRELLEGMELDLLELEAGNHQDLNERLNAIFRAAHTVKGSAGIFNLDAIVHFT 68 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +ENLLD+ R ++ L ++I+L +D M LD + Q+ A I + L + Sbjct: 69 HKVENLLDQLRSEQLVLTGEVISLLFRCRDHMLTLLDEAQFEQQ-HHADNQQISETLIEQ 127 Query: 127 ALEAKGETPSAVTRLSVVAKSEP--------------QDEQSRSQSPRRIILSRLKAGEV 172 GE P T + + S P Q P K G++ Sbjct: 128 LNAFLGEQPDVKTSEAPIKDSAPLTVEAQRFLWVKFPQSALQDGMDPLSFFAYLAKLGQI 187 Query: 173 DLL---EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ--------- 220 + + + L T D S L D +++I AV F+ + + Sbjct: 188 EQIIFDDSSLPQEWTDFDSENCYLSWQIALNSDAQDEEILAVFEFIRDEGEVYLFSANQC 247 Query: 221 ----------------------------------ITFETVEVSPKISTPPVLKLAAEQAP 246 +EV + Sbjct: 248 TPALLDELQQKGMHNLEHFQACGLQLDLMSEPLIDAESPIEVQEDSDQSITQAKPVKSDA 307 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 T + E S+RV EK+D LINL+GELV + A ++S + S Sbjct: 308 AVAKSAANETVNREQKSLRVDAEKLDTLINLIGELVTAGAGCALQASSH---ADSAMQES 364 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + +L +++++ + +RM+P+ F R+ R+VRD+A +LGK+++L + G TELDKS+ Sbjct: 365 VSRLNGLLEEVRDAALKLRMVPIGNTFIRFQRVVRDVAKELGKEIQLDIHGGDTELDKSV 424 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E+I DPL HL+RN++DHGIE+PEKR GKN G + L+A H GNI +E+ DDG GL+ Sbjct: 425 VEKIGDPLMHLIRNAMDHGIEMPEKRREQGKNHSGQITLNAYHDSGNIVLEIIDDGKGLD 484 Query: 427 RERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 E++ KA +GL + ++ DE+ LIF PGFS A++V+++SGRGVGMDVV+RNI ++ Sbjct: 485 AEKLRLKAIEKGLIDEHSVLTRDEMYQLIFEPGFSMAQEVSNLSGRGVGMDVVRRNINEL 544 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G VEI+S+ GTT+R++LPLTLAI+DG + V DE F++PL+AV E ++ Sbjct: 545 RGRVEIESELSIGTTVRLILPLTLAIIDGFLIEVGDEEFVVPLDAVKECVELHHPVTKQG 604 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 L +RG LP+++L K FN+ K + VV++Q+GG+ L+VD+L+G+ Q Sbjct: 605 VKVSSHLNLRGSVLPLIDLRKQFNL--NKQAPRRQNVVVVQTGGQMAGLVVDRLLGELQT 662 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V+K L + + GIS +TILG+G +ALI+D+ L Sbjct: 663 VIKPLGPIFENIQGISGSTILGNGDIALILDIPGL 697 >UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepID=B7HLT1_BACC7 Length = 670 Score = 583 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 211/673 (31%), Positives = 360/673 (53%), Gaps = 45/673 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D FF+E++E L + +++L+L+ D + + IFR+AH+ KG + + F+ + + T Sbjct: 4 DLLNIFFEESEEHLQSLNENVLILEQNPTDMDVVGEIFRSAHTFKGMSASMEFTEMADLT 63 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H MEN+LDE R G + ++ DII++ E D +++ + +Q + Q L L Sbjct: 64 HKMENVLDEIRHGNIVVHADIIDVIFECIDNLEKMVADVQQGGMGNIDVVS-TKQKLEAL 122 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 L ET + + + ++ IL ++A + +G + Sbjct: 123 -LNGNVETSMEHVEQESINNDDAVSHEVHITVEQQAILKAVRAIMCIEALQNIGDIQKTV 181 Query: 187 DVVKGAD------SLSAILPGDIAEDDITAVLCFVIEAD----------QITFETVEVSP 230 ++ + + + D +E+++ V+ V E + Q V + Sbjct: 182 PSIEEIEADAFGFEFTVFMNTDRSEEEVKQVVLHVSEIEKVVVKQGESLQEVDSMVAMQE 241 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRS--------------NESTSIRVAVEKVDQLIN 276 +++ + +E K S E+ SIRV +EK+++L+N Sbjct: 242 TTRVEEMIQSSVVAQVEAPIETAKQPASATPTKSTAKTKNAKGENRSIRVQLEKIERLMN 301 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 + E VI + + + + + + +LI + +L ++D+Q ++++RM+P+E VF+R+ Sbjct: 302 MFEESVIERGRIDELAQ---AIQNKELIEHLNRLGDISKDIQNVLLNMRMVPIETVFNRF 358 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR+VR LA LGK+++L + G TE+DK +I+ I DPL HL+RN++DHGIE EKR AG Sbjct: 359 PRMVRMLAKDLGKKIDLQITGEDTEVDKIVIDEIGDPLVHLIRNAIDHGIETVEKRRDAG 418 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAML 453 KN G + L A H G ++ I++TDDG G+++ ++L KA G+ + ++D EV L Sbjct: 419 KNETGTIKLEAFHSGNHVVIQITDDGNGIHKGKVLEKAIKNGVVTESEANKLTDREVFDL 478 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFSTAE V+D+SGRGVG+DVVK I +GGH+ I S++G G+T RI LPLTL+I+ Sbjct: 479 IFQPGFSTAEVVSDLSGRGVGLDVVKHTIHSLGGHLIIDSEEGKGSTFRIELPLTLSIIQ 538 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 M V+ D+ + LPL ++E+++ + D+ L G+ VL R + + + L VF Sbjct: 539 SMLVQTNDKRYALPLGNIVEAIRIKREDIQTLQ-GKDVLNYRDQIIEVKHLSTVFGEKSV 597 Query: 574 KT-----EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP-GISAATILG 627 E+ V+I+++ R Y L+V+ +IGQ ++V+K+L + + S ATILG Sbjct: 598 DEAFESYESQMVPVLIIRNTHRSYGLIVNTIIGQREIVLKSLGDFFAESSNYFSGATILG 657 Query: 628 DGSVALIVDVSAL 640 DG V LI++ L Sbjct: 658 DGRVVLILNPEGL 670 >UniRef50_Q6AJV5 Related to two-component system sensory/regulatory protein (Che family) n=2 Tax=Proteobacteria RepID=Q6AJV5_DESPS Length = 934 Score = 583 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 232/678 (34%), Positives = 357/678 (52%), Gaps = 57/678 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFG 58 M + + Q F +E+ E L+ +E LL ++ D E +N +FRAAHSIKGGAG G Sbjct: 2 MDFEDDEILQGFVEESLEHLSSIENDLLAIEEGGAAIDEELVNKVFRAAHSIKGGAGFMG 61 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + +QE +H EN+L R + +IIN+ L D +Q ++ S E D A+ Sbjct: 62 LTAIQELSHATENILGMVRNKSIIPTPEIINVLLIAADQLQTMIEDVANSNEADIANQ-- 119 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 AL +A ++K + S +V + E +++ + +A V E Sbjct: 120 -VSALNAIAEDSKNKQASPKPVPAV------EPEAPKAEIAEDAFVLFAEAAPVKTPPIE 172 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + + E + + I VE + ++ + V Sbjct: 173 QEEI--------------------VPEAVLAETPAVIETPAVIETPVVETAIEVVSTVVQ 212 Query: 239 KLAAEQAPTGRVERE-KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 +A + T + E K T + T++RV V +D L+ L GELV++++ L Q S + Sbjct: 213 NIAPQVPATKESKAEGKKTTAQSDTTLRVHVSLLDSLMTLAGELVLSRNQLLQTISTPEL 272 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 N + T ++ +LQE++M RM P+ VF ++PR+VRDL+ +LGK ++L +VG Sbjct: 273 HN---VDTVGQRIDLITSELQEAIMLTRMQPIGNVFGKFPRVVRDLSKQLGKTIDLNIVG 329 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 ELDK++IE I DPLTHLVRNS+DHGIELP +RL GK+ G +IL A H+ G +CIE Sbjct: 330 KDVELDKTIIEAINDPLTHLVRNSVDHGIELPAERLKRGKSERGQIILKAFHEAGQVCIE 389 Query: 418 VTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 ++DDG GL+ E + A A S+GL E MS E LIF PGFSTA +VTDVSGRGVG Sbjct: 390 ISDDGKGLDEEVLTASAVSKGLISPEQAQLMSGKEKINLIFMPGFSTAAKVTDVSGRGVG 449 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVK N+ ++GG+VEI S+ G GTTI I LPLTLAI+ + +++E + +P + E Sbjct: 450 MDVVKTNLDQLGGNVEILSELGHGTTISIKLPLTLAIIPCQIITLSNERYAIPQVNLEEL 509 Query: 535 LQPREADLH---PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI---------- 581 L+ + + G V+ +RG LP++ L V + + + Sbjct: 510 LRISASQVKERIERVGDAEVVRLRGNLLPLIRLADVIGLGQQDKDQSSAALDTAGDSALN 569 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV---- 637 +V++ +G +Y L+VD L ++V+K L + ++ + ATI+GDG +ALI+D+ Sbjct: 570 IVVVSTGSMKYGLIVDSLQDSEEIVIKPLGRHLQQCKAYAGATIMGDGRIALILDLGNIA 629 Query: 638 --SALQAINREQRMANTA 653 + L ++ QR A A Sbjct: 630 KMATLNSLEGTQRAAELA 647 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 12/127 (9%) Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 E F +PLN V + + AD+ + G R ++ RG LP++++ V V + Sbjct: 669 AEKEQFAVPLNQVERIEKIKRADIEDV-GNHRTMQYRGGNLPLIQVDDV-AVVNPLADHD 726 Query: 579 QGIVVILQSGGRRYALL----VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 +V++ LL VD + +V V +++ K PGI ++I+ +G+ L+ Sbjct: 727 DLLVIVFNVALTTVGLLAVGPVDAI----EVFV-DIDDKTLKQPGIMGSSII-NGNTTLL 780 Query: 635 VDVSALQ 641 V++ L Sbjct: 781 VNIFELV 787 >UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJT3_DESAA Length = 757 Score = 582 bits (1502), Expect = e-164, Method: Composition-based stats. Identities = 218/652 (33%), Positives = 364/652 (55%), Gaps = 43/652 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + ++F E+ E L+ +E H+L L+ E + + ++AIFR H+IKG +G + + Sbjct: 146 RELIESFIQESMEHLSTIEIHVLELEKEPDNLQLVDAIFRPFHTIKGVSGFLNLREINKL 205 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD--YICQAL 123 H +E +LD+AR ++ ++ ++++ L+ D++ +D + + + L Sbjct: 206 AHQIETVLDDARSKKISVSPSLVDIVLDGVDLVTRLIDDVDDRLKTGRLEPEYLELGPFL 265 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 +L +G V A E +E++ + ++G L Sbjct: 266 ERLHTVGEG----------VNAPLEDGEEENIPEGDGL----------------DVGELL 299 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 VV+ D A+ E + +I E + + + K A+ Sbjct: 300 VKKGVVQAEDLEEALAKQASGESKGKKI-------GEILIEGKKAKARDVAQALRKQKAD 352 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + P I+V K+D ++++VGELVI +++L QR + + DL Sbjct: 353 RQPAKAAGGNGAG------FIKVDTLKLDNMVDMVGELVINEAVLKQRLA-MAAGKDRDL 405 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + QL R ++Q MS+RM+PM+ F + RLVRDLA K GK+V L ++G TE+D Sbjct: 406 AGDLAQLGRITSEIQRIAMSMRMIPMKNTFQKMIRLVRDLASKAGKKVNLEMMGEDTEID 465 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 +++++ I DPL H+VRNS DHGIE+P+ RLAAGK G +IL+A H+GGN+ IEVTDDG Sbjct: 466 RNVVDMIYDPLVHMVRNSADHGIEIPKDRLAAGKPEAGTIILNAYHKGGNMIIEVTDDGR 525 Query: 424 GLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 GL++E + AKA +GL +E MSD ++ LIF PGFSTA++VTDVSGRGVGMDVVK + Sbjct: 526 GLDKEALTAKAMEKGLIQSAEGMSDQDIFGLIFHPGFSTAKKVTDVSGRGVGMDVVKGVL 585 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 K+ G VE+ S++G GT+I + LPLTLA++DG+ VR ++ +++P +V+ES++P D Sbjct: 586 DKLRGKVEVMSRKGQGTSILLKLPLTLAVIDGIIVRAGEQSYVIPTISVLESIRPNREDC 645 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 H + ++++RG P++ L ++F+ + IVVI +S G++ +LVD+++G+ Sbjct: 646 HTVVNKGEMIKIRGSLYPLIRLHELFDFPPNTRDPWDAIVVIAESEGKQKCILVDEILGK 705 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +VV+K+L + + V G++ IL +G V +I+DV+ L ++ Q TA+ Sbjct: 706 QEVVIKSLSAMLKNVVGLAGGAILANGRVGMILDVAGLFSLVESQAEYLTAS 757 >UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EU21_ARCB4 Length = 685 Score = 582 bits (1501), Expect = e-164, Method: Composition-based stats. Identities = 232/674 (34%), Positives = 381/674 (56%), Gaps = 33/674 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 MS DIS + + F +EA EL + LL + +++ +FR H++KG + Sbjct: 1 MSFDISKYREMFLEEAVELFESADNVLLEAENNGSLTDDEMGQLFRDVHTLKGSGASVEL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + E TH +ENL+D+ R +++ ++ ++ D+M+E LD +Q + Sbjct: 61 AFFAEFTHDVENLMDKLRSHKIEFVPEMAGTLIDGLDVMKEILDLEVSNQMTREKFTEMT 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE-------- 171 L + + G T + K E + S++ E Sbjct: 121 SSLLEDIRAYSNGGTVKKEEAPKIEVKKEEVISSNSSENKENFGFFDNGLNEQRDSKSQP 180 Query: 172 ------VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 D+ E + ++ K ++ L+ D D+ F + IT + Sbjct: 181 YGIFADDDMNENHKNYGFFDDNLEKKSNDLN---DEDFKLDNSKEDFGFFDDMPSITPDA 237 Query: 226 V----EVSPKISTPPVLKLAAEQAPTGRV------EREKTTRSNESTSIRVAVEKVDQLI 275 V ++ + PV+ + T R+ E K SN + SIRV ++K+D L+ Sbjct: 238 VMKTNDIEEQKEETPVVVQKESEVATRRMKNNNVEEEAKKVPSNNNNSIRVNLDKIDLLM 297 Query: 276 NLVGELVITQSMLAQRSSELDPVN-HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 N VG+LVIT +ML Q SS ++ G ++ + L+R+ RD+Q+S+MSIRM+PM+ ++S Sbjct: 298 NNVGDLVITNAMLTQFSSTIEETKTRGSVLERLELLERHIRDMQDSIMSIRMVPMDSIYS 357 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 ++P++VRD++ KL K+VE G + E+DK++IE + DPL H++RNSLDHGIE+PE R+A Sbjct: 358 KFPKVVRDISKKLNKKVEFKHYGDNVEIDKAMIEGLTDPLMHIIRNSLDHGIEMPEDRVA 417 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVA 451 GK G++ +SAE G + I + DDG G++ E++ KA +G M+++E A Sbjct: 418 LGKPETGSISISAEQANGQMIITIQDDGKGIDSEKVAQKALEKGQIDENQYNAMTNNEKA 477 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 +LIF G STA+++TD+SGRGVGMDVVK NI K+GG + + ++ G GTTI I+LPLTLAI Sbjct: 478 LLIFGAGISTADKITDISGRGVGMDVVKTNIHKLGGVINLDTEIGKGTTITIMLPLTLAI 537 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG-ERVLEVRGEYLPIVELWKVFNV 570 LDG+ +RVA++ +ILPL++++ESLQP + + G + +L +R E++P+V+L ++F + Sbjct: 538 LDGLDIRVANQKYILPLSSIVESLQPTADMIKKIGDGTQDLLMLREEFIPVVKLHQLFGL 597 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + + G++++++SG + AL +D+ + QHQVVVK L+ N+R V GI AAT+ GDGS Sbjct: 598 EKSFEKLEDGMLIVVKSGNTKVALSIDEFLNQHQVVVKPLDKNFRSVQGIGAATVKGDGS 657 Query: 631 VALIVDVSALQAIN 644 + LI+DV + Sbjct: 658 IGLILDVVGIINAQ 671 >UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR56_OPITP Length = 730 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 227/639 (35%), Positives = 345/639 (53%), Gaps = 53/639 (8%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F+ EA + L +E LLVL E + E LN+IFR+ H+IKG AG G + Sbjct: 144 ELLSEFYGEAVDHLQQIEAALLVLDHEPENPEALNSIFRSFHTIKGNAGFLGLVPMHTLA 203 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+LLD AR +++LN II L + ++ L A Q + +AL Sbjct: 204 HEVESLLDLARNHKLKLNAAIITEILRS----RDALQALTQ----------QVAKALE-- 247 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 KG+ P+ + +S + ++ + +S + + + +E L Sbjct: 248 ----KGQLPTQIISVSHLIRAVHRLSESPAGGLQAEAPAPPAPVAEKFVEVPLP------ 297 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + +AVL V A + P A + Sbjct: 298 -------------------PEPSAVLPPVPVAAEPVTAHGAAPGPAPVAPFPAPAPAAS- 337 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 + ++RV EK+D L+++VGELVI QS L + + + V L + Sbjct: 338 ------ATIAKVASGGTVRVNTEKLDSLMDVVGELVIVQSQLLETARHHNDVTGSPLQRN 391 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + QL R ++LQ + MS+RM+P++ F + RL RDLA GK+V G TELD+++ Sbjct: 392 VAQLSRITKELQHTAMSLRMIPIKQSFQKMERLARDLARDFGKKVSFVTSGEDTELDRTV 451 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E I DPL H+VRN+LDHG+E P +R+AAGK G L L A HQG NI IE+ DDG G+N Sbjct: 452 VEEIGDPLVHMVRNALDHGLEPPAERVAAGKPETGVLHLKAYHQGSNIVIELQDDGRGIN 511 Query: 427 RERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 ++I KA +GL ++ +E+ L+FAPGFSTAE+VT VSGRGVGMDVVKRNI+K+ Sbjct: 512 PDKIYQKAIEKGLIAPGTTLAKEEILALVFAPGFSTAEKVTAVSGRGVGMDVVKRNIEKL 571 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G +EI S+ G+T ++ LPLT+AI+DG+ VRV ++ FILP +V +L+P + + Sbjct: 572 RGKIEINSEVKRGSTFKVKLPLTMAIIDGLVVRVGEDRFILPSTSVQRALRPSRESVATV 631 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 G VL++RG +PI L + F + +GIVVI++ G+ ALLVD+++ + +V Sbjct: 632 QGQGEVLDLRGRLVPIHRLHRRFGIPHQAENPWEGIVVIVEHSGKISALLVDEMVSKQEV 691 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 V+KNL + + +PG++ ILGDG++ALI+D + L Sbjct: 692 VIKNLGAFMQGLPGVAGGAILGDGNIALILDPATLLQAA 730 >UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEU3_BACSK Length = 648 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 220/648 (33%), Positives = 348/648 (53%), Gaps = 25/648 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D+ F +EADE L M LL L+ + D + + IFR+AH++KG + T GF+ + E T Sbjct: 5 DYIGMFLEEADEHLQAMNAKLLQLEQDPFDKDAIAEIFRSAHTLKGMSATMGFNAMAELT 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ-SQEPDAASF--DYICQAL 123 H +ENLLD R G ++ I+L + + ++ + + E + A+ D Q L Sbjct: 65 HSLENLLDAMRDGNIEAGAGEIDLLFDAVEYLEASVSHVRNTGGELEEANGLRDTFAQLL 124 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQS----RSQSPRRIILSRLKAGEVDLLEEEL 179 Q A S T V QD + L ++A V + Sbjct: 125 GQERKSANEVAASLDTDTHAVMDQAVQDGVPVQVIHVEIDDNAALKGVRAFMVASEAAQF 184 Query: 180 GHLTTLTDVVKGADS------LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 G L + + + + + DI L + E Q+T + K Sbjct: 185 GELIHTEPSREELEEGKFASGFTLTAATTLPDSDIKKRLEGISEVKQVTVTAYKPQKKAD 244 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 K +AP+ + K ++ + +IRV VEK+D L+ L ELV+ + L ++ Sbjct: 245 K---AKSQTAKAPSEKGAGAKGEQAQQ-KTIRVNVEKLDSLMYLFEELVVEKGRLELVAN 300 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 L +L ++ R LQE ++S+R+MP+E VFSR+PR+VR ++ ++GKQ+ Sbjct: 301 SLQT---DELTNVFEKVSRITSHLQEVMLSVRLMPLEPVFSRFPRMVRKVSKEIGKQIRF 357 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 + G +TELD+++I+ I DPL HL+RNS+DHGIE P R +GKN G ++L A + G + Sbjct: 358 VIEGETTELDRAIIDEIGDPLLHLLRNSIDHGIEEPAVRQKSGKNPEGLIVLRAFYSGSH 417 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 + IE+ DDGAG+ +E++L KA L +E M+ DE+ L+FAPGFSTA +VTD+SG Sbjct: 418 VVIEIEDDGAGIKQEKVLKKAIENELITAAEAEKMASDEINNLLFAPGFSTANEVTDLSG 477 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVG+DVVK MGG + + SK+G GT I LPLT++I+D M V + +++ P+ Sbjct: 478 RGVGLDVVKSTFSAMGGEIAVSSKEGEGTRFSISLPLTVSIIDAMMVELGSDIYAFPIAN 537 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 + E+ ++++L A G+ + E RG+ +P+V L + F + K + + V++L Sbjct: 538 IAETAYVQKSELKQ-ADGQSLFEWRGQLVPLVSLNEQFGLP-EKEDEQELAVLMLYRNQT 595 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 A+ VD+ IG+ +VV+K L S + GIS TILGDG++ALIVD++ Sbjct: 596 LMAVKVDRFIGKQEVVLKPLGSLLKGTKGISGGTILGDGTIALIVDIA 643 >UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria RepID=Q7NV36_CHRVO Length = 721 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 231/722 (31%), Positives = 358/722 (49%), Gaps = 79/722 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + FF+E+ EL +E LL P E N +FR AH+IKG AG FG L Sbjct: 1 MDLSKAREVFFEESRELCDGLESALLDPVAHPPGDETYNLLFRTAHTIKGSAGIFGLDAL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK---QSQEPDAASFDYI 119 H+MEN+L+ R G++ L+ D+I L L D ++ LDA Q + D + + Sbjct: 61 VRFAHVMENVLERLRSGQVALSDDLITLLLACNDHLRRLLDASAVSDQMAQRDLPEGEPL 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL-----SRLKAGEVDL 174 LR+ P+ + VA + ++ L + + Sbjct: 121 LAGLRRYQEGGASAGPAVAAGDAPVAAEAGGGDVETGSPYWQLSLRFHPDTFRHGFDPLS 180 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV-------- 226 LG TL DV S D+ E I L E + Sbjct: 181 FVRYLGGFGTLRDVTPVWRSWPPPQLLDVTECFIGFDLALETEEGRQRIADTFEFIAEDS 240 Query: 227 ----------------------------------------EVSPKISTPPVLKLAAEQAP 246 + + +I V + AP Sbjct: 241 HIGILAPYAPLADYLAEAEALGEPLEEQLERWLARGALTPDEAERIRNGDVTDPVEDAAP 300 Query: 247 TGRVE-----------REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 + + +S IR+ K+D+LIN VGELVI + + Sbjct: 301 DTQSAVPAAAQAPVGGAPARSGRGDSQYIRIEASKLDRLINRVGELVIASAGTKLIAQ-- 358 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 G+L+ S+ + +++ +++RM+P++ +FSR+PR+VR+++ +L K ++L + Sbjct: 359 -SRGDGELLESVAVINTLVESIRDDALTLRMVPVDEIFSRFPRMVREVSKQLNKAIQLEI 417 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TE+DKS++E++ DPL H+VRN++DHG+E EKR AAGK G + L+A H G++ Sbjct: 418 KGGDTEIDKSMVEKLTDPLMHIVRNAVDHGLESAEKRRAAGKPEQGTVTLNAYHDAGSVV 477 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 +EV DDG G+NRE++LAKA +GL +SD E LIF PGFSTA+ V+D+SGRGVG Sbjct: 478 VEVKDDGGGINREKVLAKAIERGLVAEGRLLSDQETLQLIFLPGFSTADAVSDLSGRGVG 537 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVKRNI+ + G +EIQS+ G G+T R+ LPLTLAI+DG V V + ++PL+ ++E Sbjct: 538 MDVVKRNIEALRGEIEIQSQPGVGSTFRLRLPLTLAIIDGFRVEVNESALVMPLDMMIEC 597 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + E ++ R + +RG++LP V L ++F + A +VI+ G R + Sbjct: 598 VDMPEG---AMSQRARQVNLRGDWLPFVSLRELFGLPPAAHPE---YIVIVHYGEHRAGI 651 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ--AINREQRMANT 652 +VD+L+G+ Q V+K L ++ + GIS +TILG+G AL++D+ L A RE+R+ Sbjct: 652 VVDRLMGEVQAVIKPLGEIFKSLRGISGSTILGNGKPALVLDIPQLIHHACRRERRLIRQ 711 Query: 653 AA 654 A Sbjct: 712 NA 713 >UniRef50_Q67P71 Two-component sensor histidine kinase involved in chemotaxis, CheA n=1 Tax=Symbiobacterium thermophilum RepID=Q67P71_SYMTH Length = 710 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 233/700 (33%), Positives = 364/700 (52%), Gaps = 58/700 (8%) Query: 3 MDIS-DFYQTFFDEADELLADMEQHLLVLQPEA--PDAEQLNAIFRAAHSIKGGAGTFGF 59 DIS + + F DEA+ELL ME +L L+ +A PD E + IFRAAH++KG + T G Sbjct: 5 FDISAEDIRVFLDEAEELLQTMEAGILRLESDAGDPDPEVIQDIFRAAHTLKGSSATLGH 64 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + E TH MEN+LD R+G+ + T +++ D ++ D EP + D + Sbjct: 65 QRMAELTHAMENVLDRLRKGKASVTTPLVDTLFHCLDALKLFKDEIATG-EPAQVNTDEL 123 Query: 120 CQALRQLA-----------------LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 + L L +E T ++ Q+R + Sbjct: 124 MRELAALEGASAPAAPAQAAPSADGVEFPPLTAQQQAKVDEARTKGLNVYQARLEIAPDA 183 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 + ++A + L ++G + + ++ + L V + + Sbjct: 184 AMPAVRAFQALLAVGDIGEIVLSVPTQEQVEN-DQVGSDMKLLFVTRESLQKVQDVLREV 242 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKT-------------------------TR 257 E + P + P G V T Sbjct: 243 PEMAVRTLAAYEPVSAAAPSGPTPAGEVAAAAMAPAAPKAGPVPAGDNGAGNGGGALRTP 302 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQLQR 312 ++RV VE +D L+N VGELVI ++ L Q S L+ GD + +++ QL R Sbjct: 303 RGGMRTVRVDVEVLDNLMNTVGELVIERTRLQQVLSRLEVEREGDELSQTMSSALAQLGR 362 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +LQE + RM+P+E +F ++PR+VRD+A K GK++ + G TELD+S+IE I D Sbjct: 363 LTGNLQEEIQRARMIPVENLFRKFPRMVRDIAQKFGKEINFIMRGEETELDRSVIEEIGD 422 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RN++DHGIE PE R+AAGK + G +IL A H+ +I I V DDG G++ E+I A Sbjct: 423 PLMHLLRNAVDHGIEPPEVRVAAGKPAAGTVILEAFHEENHIIISVRDDGRGVDPEKIRA 482 Query: 433 KAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A +G+ E +SD E LI++PGFSTA++V+DVSGRGVG+DVV++NI+++ G V Sbjct: 483 SAVRKGILSEEAARRLSDPEAINLIWSPGFSTADKVSDVSGRGVGLDVVQKNIERINGSV 542 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 EI+S G GT R+ LPLTLAI+ + V + ++ +PL +V+E+ + +++ + E Sbjct: 543 EIRSTVGQGTEFRVKLPLTLAIIRALQVELLGTIYCIPLGSVVETDRIPVSEIQTVRQRE 602 Query: 550 RVLEVRGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 V++ RGE +P++ L + F + E + VVI+ GR+ L+VD LIG+ VV+ Sbjct: 603 VVVK-RGEVIPLLRLAEAFELQRPEGAEEPDEIFVVIVAVMGRQIGLVVDSLIGEGDVVI 661 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 K L ++PGIS ATI+GDG VA+I+DVS+L +++ Sbjct: 662 KPLGRFIGEIPGISGATIMGDGDVAIILDVSSLVNSVQDE 701 >UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 Tax=Methanomicrobiales RepID=A3CU26_METMJ Length = 660 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 202/669 (30%), Positives = 344/669 (51%), Gaps = 38/669 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D + + F +E+ E ++ +LL L+ ++ IFR+AH++KG + + GF Sbjct: 1 MFDEEGYRKLFVEESRENHENIVNNLLALESGDDQHTAIDEIFRSAHTLKGMSASMGFDA 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 ++ H ME++ R G ++ + +L L D ++ LDA + ++P + Q Sbjct: 61 MEHLCHSMEDVFSLIRSGRREVTASLTDLLLTCTDAIEGMLDAIEAGEKPSDEQSTSLVQ 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL------SRLKAGEVDLL 175 L+ A E + ++ A P+ + P + S +K LL Sbjct: 121 DLQAFAEEEEEGGEQETPDMAASAGVPPEQAEEADGRPLYTLAVAVDPSSTMKDIRAMLL 180 Query: 176 EEELGHLTTLTDVVKGAD---------SLSAILPGDIAEDDITAV----------LCFVI 216 + L + T+ + + ++ + D + + L Sbjct: 181 LQNLEEIGTVRSTTPSRELLEDGKFDGAFEILIESEAGVDALRTIASGTEISLLALSTSQ 240 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE-KTTRSNESTSIRVAVEKVDQLI 275 V+ + P + Q P +V+R K +S E +IRV ++++D+++ Sbjct: 241 SPTVAPLAIPPVASEEVRAPEQAPSEPQIPPPQVQRAVKAEKSREIKNIRVDIQRLDRMM 300 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 NLV +LVI + L Q + + + ++ + R+ DLQ +M IRMMP+E +F+R Sbjct: 301 NLVEDLVINRGRLEQIAKKH---GIKEFDEALSMVGRSVSDLQNLMMGIRMMPLERIFNR 357 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 PR+VRD+A GK+VE ++ G TELD+S+++ + DPL H++RN+++HGIE PE R A Sbjct: 358 LPRVVRDVANHDGKEVEFSIEGGETELDRSMMDGLSDPLLHIIRNAVNHGIETPEIREAG 417 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAM 452 GK G+L L+A N+ I++ DDGAG++ ER+ K +GL +E + DE+ Sbjct: 418 GKPPKGSLRLTARRDKDNVVIDIEDDGAGIDTERLRKKGVEKGLMTAEAAASATKDELVG 477 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 L+F PGFSTAE +TD+SGRGVG+DVVK+ I+ + G ++++++ G GT ++LP T+AI+ Sbjct: 478 LLFEPGFSTAETITDISGRGVGLDVVKKTIESLKGSIKVETEVGRGTKFELVLPPTMAII 537 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 D M V ++ +P++ V+E Q R +H + E +L +R + LP+ L +F A Sbjct: 538 DVMMVHISGMRCAIPVSNVVEVAQTRPEAIHRIGNSEAIL-LRDQTLPMHRLEDMFGRAE 596 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 +V+LQ+ GRR ++VD + GQ +VVVK L GIS TI GDG V Sbjct: 597 KSD-----TLVVLQNDGRRCCIVVDSVDGQQEVVVKPLSRIAGNCRGISGITIPGDGDVV 651 Query: 633 LIVDVSALQ 641 ++DV+ + Sbjct: 652 PVLDVNTMI 660 >UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Tax=Alphaproteobacteria RepID=B8GZ93_CAUCN Length = 762 Score = 579 bits (1493), Expect = e-163, Method: Composition-based stats. Identities = 263/745 (35%), Positives = 379/745 (50%), Gaps = 101/745 (13%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ TFF E +ELLAD+E LL ++ A D E +NA+FRA HSIKGGAG FG L Sbjct: 3 ELEAIKVTFFQECEELLADLEGGLLAMEEGAGDLETVNAVFRAVHSIKGGAGAFGLEPLV 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H+ E LLD R G + ++ + L DI+ + + A + + D A+ + L Sbjct: 63 RFAHVFETLLDAVRAGSVPNTVELAAVLLRASDILADHVSAARGLGDVDMAASAAMAAEL 122 Query: 124 RQ-----------------LALEAKGETPS---------------------AVTRLSVVA 145 Q E P+ +T + A Sbjct: 123 EQWTDPNATPTAPAPVAAPTVAEEPAPAPALIGADDDAMDGDDLGFVFVPQTITVEAQAA 182 Query: 146 KSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT--------------DVVKG 191 +E + S R KA E LL EL L + D Sbjct: 183 DAELIPSNVWTVSIRPKSDLYRKANETALLLRELSRLGPIKATLDDSALPLLQNLDPEAA 242 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 + S L D E I V FV + E S + S + A A + Sbjct: 243 FITWSVRLETDQDETAIREVFEFVDGDCDLEITRGEGSVEASIAALTAPAEPVAAVEPIA 302 Query: 252 REKTT-----------------------------------------------RSNESTSI 264 + I Sbjct: 303 PAPEPVEVAPPIAPPAAAPVAEVAPAVEAAKPAAAAPAAAAAAAPKATPVEVPGPGQSVI 362 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV E++D+LI+LVGELVI Q+MLAQR E +L + +L++ R++Q+SVM+I Sbjct: 363 RVDPERIDRLIDLVGELVINQAMLAQRVGEYGIAPSSNLAMGLDELEQLTREIQDSVMAI 422 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 R P++ VF R PRLVR++A GKQ L + G +TE+DK++IER+ DP+TH++RN++DH Sbjct: 423 RAQPVKSVFQRMPRLVREVANMTGKQARLVMDGENTEVDKTVIERLSDPITHMLRNAIDH 482 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE- 443 G+E PE+R AAGKN G + L+A H+ G I IEV+DDG G+NRER+ A +GL + Sbjct: 483 GLESPEERKAAGKNPEGVVRLAALHRSGRIVIEVSDDGKGINRERVFGIAVKKGLIAPDL 542 Query: 444 NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 ++D+E+ LIF PGFSTAE+++DVSGRGVGMDVVKR++Q +GG + I S+ G G+T + Sbjct: 543 QLTDEEIDNLIFLPGFSTAEKISDVSGRGVGMDVVKRSVQALGGRISISSRPGQGSTFTL 602 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLA+LDGM V VA E ++PL A++ESL+P+ ++ PL VL VR ++P+++ Sbjct: 603 SLPLTLAVLDGMVVDVAGETLVVPLAAIVESLRPKPEEVRPLGPVGSVLAVRDSFVPLID 662 Query: 564 LWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 + T G+V++++ G R AL+ D + GQ QVV+K+LE NY++V G++A Sbjct: 663 VGLTLGYREESPHPTDGVVLLVEGEDGSRAALVADAIHGQRQVVIKSLEQNYQQVEGVAA 722 Query: 623 ATILGDGSVALIVDVSALQAINREQ 647 ATILGDG VALI+DV A + R + Sbjct: 723 ATILGDGRVALILDVDATINLRRRE 747 >UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae RepID=CHEA_RHOSH Length = 686 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 231/668 (34%), Positives = 357/668 (53%), Gaps = 36/668 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQP---EAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MD SD FF E ++L+ + + L ++ + D E +NA+FRA HSIKGGAG F Sbjct: 1 MDQSDIRSAFFVECEDLMEALNEGLDRIEDTLDDGHDDETVNAVFRAVHSIKGGAGAFKL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E LD R G + + ++ L + D + + L A + E D + Sbjct: 61 DALVRFAHQFETTLDALRAGRVSADPPLLALLHKAADRLSDLLQAARTGSETATIDPDDL 120 Query: 120 CQALRQ---------------------LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 L Q L L+ P P + Sbjct: 121 VAQLAQAAGEEEAGEADAEDLGFVPMRLDLDLPAAAPDEGQSGCYSIDFSPTRALYACGN 180 Query: 159 PRRII---LSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFV 215 I+ LS L EV L L L D + L D E I V FV Sbjct: 181 DTSILFRVLSDLGRMEVRLDRSRLPDFDAL-DWQESWLDWHLTLETDEPEHQIDEVFEFV 239 Query: 216 IEADQITFETVEV-SPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST-----SIRVAVE 269 + ++ + + +P+ P + +G +K+ + T ++RV ++ Sbjct: 240 EDLCRLEIRPMAMEAPRTDPDPEPDPEPDPPASGPAAAKKSPAEDHRTSSPRATVRVELD 299 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 +VD+LIN+VGELVI Q+ML+Q + + + + AR++QESVM+IR + Sbjct: 300 RVDRLINIVGELVINQAMLSQCVQDEGVPPRSPVRNRLDDFRNLAREIQESVMAIRAQAI 359 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 + +F R R+ R+ + KQ+ L G STE+DK++IER+ DPLTH++RN++DHGIE Sbjct: 360 KPLFQRMSRIAREASEISQKQIRLVTEGESTEVDKTVIERLADPLTHMIRNAVDHGIEPA 419 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDD 448 ++RL GK VG + L+A H+ G + IE+ DDGAG+NR R+L A +GL + ++++ Sbjct: 420 DRRLHLGKPPVGLITLTAAHRSGRVLIEIKDDGAGINRPRVLEIAQGKGLVAQDAQLTEE 479 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 E+ L+F PGFSTA V+D+SGRGVGMDVVK I+ +GG + I S G GTT I LPLT Sbjct: 480 EIDGLLFMPGFSTASVVSDLSGRGVGMDVVKSAIESLGGRITIASDPGVGTTFTISLPLT 539 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LA+LDGM V V + ++P++A++E+L+PR AD+H L G++V+ +RG +PIV+ +F Sbjct: 540 LAVLDGMVVDVGGQTMVVPVSAIVETLRPRPADIHVLGSGDQVVAIRGSLVPIVDCGSIF 599 Query: 569 NVAGAKTEATQGIVVILQSGGRRY-ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 + +++++++ ++ AL+VD + Q QVV+K LE+ Y ++PG++AATILG Sbjct: 600 GFRAPVRSYEESVLLLVETARQKLCALVVDTIHDQRQVVIKGLENGYGRIPGVAAATILG 659 Query: 628 DGSVALIV 635 DG +ALI+ Sbjct: 660 DGRIALII 667 >UniRef50_C8S642 CheA signal transduction histidine kinase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S642_FERPL Length = 666 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 211/673 (31%), Positives = 365/673 (54%), Gaps = 41/673 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M DI +F + F EA E + ++ + L+ D + +N IFRA H+IKG AG G+ Sbjct: 1 MVDDIENFKEEFLQEAREYIENINLEFIKLEK--GDLQSVNEIFRAVHTIKGMAGFMGYK 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 ++E H++E +L + G++++++D++++ L + D +QE +D + S + D I Sbjct: 59 KIEELCHVLEAVLGAIKDGKIEISSDLVDVLLNSVDTLQELIDLVESSDTDEKDIDDVIV 118 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + E + E + + + E + + + +K+ ++ E L Sbjct: 119 NLRAIIDSEKRKEKADDIRDKQLPDEEESEINAGFKVEVQLAEETPMKSVRALVVIETLK 178 Query: 181 HLTTLTDVVKGADSLS---------AILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 + ++ + + + D E + VL E ++ + +E + Sbjct: 179 EFGKIVKIIPSEEEMEKENFDGKFIIYMNTDNIE-KVETVLSKDSEIEKYNIQKIEKEKR 237 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE--------------------KV 271 P +++ E ++T + + I+V + ++ Sbjct: 238 AKKAPKKVKKSKKKDEKVEEEQRTDKVDSQKIIKVNQDALSKNAKPEKKVEFIKISTVQL 297 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D+++NLVGELVI + L + S++ D +L ++ L + LQ+ VM +RM +E Sbjct: 298 DKIMNLVGELVINKGRLLKISTDYD---IPELAEAVSILDKIVSSLQDEVMQVRMEKIEK 354 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 VFS++PR+VRDL+ KLGK+VEL + G TELD+S++E++ DPL H+VRN +DHGIE PE+ Sbjct: 355 VFSKFPRMVRDLSRKLGKEVELEMEGLDTELDRSVLEQMNDPLIHIVRNCVDHGIETPEE 414 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDD 448 R+A GK+ VG + +SA N+ IE+ DDG G++ E++ KA +GL +E MS++ Sbjct: 415 RVAKGKSRVGKIKISAWRDKNNVIIEIEDDGKGIDPEKVKEKAIERGLISREEAEKMSEE 474 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 E+ MLIF PGFST EQ T+VSGRGVGMDVVK ++K+GG V++ S++ GT IRI LP T Sbjct: 475 ELKMLIFMPGFSTKEQPTEVSGRGVGMDVVKTTVEKLGGTVKLYSEKDKGTKIRIQLPPT 534 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 +AI+ + ++V E++ +P++ V+ ++ ++D+ + G E L VRG+ +P+ L ++F Sbjct: 535 VAIIKSLLIKVGSEIYAIPISNVVGAIYLTDSDVENIHGSEFSL-VRGKLIPVFRLRQLF 593 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 V G K E G +I++ ++ L+ D + ++V+K L K+ G + TILGD Sbjct: 594 GVNGTKPEKEVG--IIVEKENEQFMLVADAIADLQEIVIKPLYGYLAKIKGFNGVTILGD 651 Query: 629 GSVALIVDVSALQ 641 G V I+DV + Sbjct: 652 GRVVPIIDVFTII 664 >UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 Tax=Oscillatoriales RepID=Q10WZ9_TRIEI Length = 801 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 201/668 (30%), Positives = 336/668 (50%), Gaps = 76/668 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M M+I + Q F ++ E + +E L+ L+ + + E + I+R+ H++KG +G G Sbjct: 1 MKMEIDEDIQAFLIDSYETINKLESDLVALEKHSINPELIQCIYRSLHTLKGNSGFLGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 LQ H ENLL + G + + +I+N+ L+ D +++ L + + + +++ + Sbjct: 61 TLQSLAHAGENLLACLQDGRIIITPEIMNVLLQAIDGIKQILYCLETTGKQGDYNYNSLL 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L + + E L S PQ E+ + S LS A + +EE+ Sbjct: 121 KNLASITSSEQTEKAQTEVSLDYE-DSWPQLEKVDNSSQN---LSTTDAQQTAFVEEQAL 176 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 T + S + L G+++ED +T L Sbjct: 177 PEKTEQLLNTSEISSTLPLSGNLSEDILTTNL---------------------------- 208 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 T S IRV V+ ++QL+NLVGELV+ ++ + ++ Sbjct: 209 ---------------TASISGNYIRVDVQLLNQLMNLVGELVLCRNQVLVFNNRQTDSVF 253 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 GD + +L +LQE +M + P+ +++++PR+VRDL+ LGK++ L + G T Sbjct: 254 GD---TSQRLDLITTELQEGLMKTLLQPIRKIWNKFPRVVRDLSLSLGKEINLEMEGEET 310 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDK+LIE I DPLTHLVRN +DHGIE P+ R++ GK +G L L A H+ G + IE+ D Sbjct: 311 ELDKTLIEAISDPLTHLVRNCVDHGIEHPDIRISKGKPPIGRLWLRAFHESGYVNIEIGD 370 Query: 421 DGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ +RI AKA + + E ++++E LIF PGFSTA ++T++SGRG+GMDV Sbjct: 371 DGRGIDIKRIKAKALQRHIITHEQASSLTENEAYNLIFIPGFSTAPKITNISGRGIGMDV 430 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ NI+K+ G + I S+ G GTT ++ +PLTLAI+ + V + + +P +++E ++ Sbjct: 431 VRNNIEKISGTINISSQLGQGTTFKLKIPLTLAIIPTLIVTTNGDRYAIPQVSLLELVRL 490 Query: 538 READLH---PLAGGERVLEVRGEYLPIVELWKVFNVA--------------------GAK 574 D + G + +RG LP+V L V + G Sbjct: 491 EGKDAKKKVEMVHGAPIYRLRGNLLPLVYLDNVLQLEANKSHRYPLATPWLEGVSLKGQS 550 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 +V++Q+ + + L+VD + ++VVK L +K+ + ATI+GDG VALI Sbjct: 551 DNLDILNIVVVQAAHQSFGLVVDAINDTQEIVVKPLGRQLKKISCFAGATIMGDGKVALI 610 Query: 635 VDVSALQA 642 +D+ L Sbjct: 611 LDIQGLAQ 618 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 56/135 (41%), Gaps = 17/135 (12%) Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 A + + V + + + + G ++V++ R + LP++ L + F +++ Sbjct: 655 AHRRMAIARSKVARLEEFPISSVEHV-GNQKVIQYREKILPLIYLSEFFATNQLSSQSQN 713 Query: 580 GI-------VVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKV-PGISAATILGDG 629 VV++ +V+Q++ + ++ +K Y + GI A ++ + Sbjct: 714 VPQLLTIQVVVVVIDEDNLVGFVVEQIMDIVEQEIKIK-----YAAIEKGIDYAAVIQE- 767 Query: 630 SVALIVDVSALQAIN 644 V I++V + + Sbjct: 768 RVTEILNVEEIVKVA 782 >UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSL2_SYNAS Length = 735 Score = 575 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 218/639 (34%), Positives = 342/639 (53%), Gaps = 60/639 (9%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F E E + ++E ++L L+ + + +NAIFR HSIKG A ++E +H Sbjct: 154 LLRDFIAEGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRELSH 213 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E+LLD+AR GE + +I++ L+ D ++ + K+ A Sbjct: 214 NIESLLDKARNGEHSVTPPLIDVVLDGADALKSMISRLKE-------------------A 254 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 LE K E P V ++ LE + ++ + Sbjct: 255 LEGKKENPLDV--------------------------------DLSALEMRIHNINKGIE 282 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 L IL D VL + + + + ++ + + A Sbjct: 283 QEPSVKKLGEILIDDG-------VLSEQMLEEGLKAKENNPEKRLGETLIKERAVTPKQV 335 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 + R++ + + ++IRV K+D LI++VGELVITQSM+ Q S + N DL ++ Sbjct: 336 SQALRKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQENGN-KDLARNV 394 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 QL R +LQ+ S+RM+P++ F R RL RD++ +GK V + + G TELD++++ Sbjct: 395 SQLFRITSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDRNMV 454 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 + I +PL H++RNS+DHG+E PE+R+ GK G + L A H+GGN IE++DDG GLNR Sbjct: 455 DEIYNPLVHMIRNSVDHGLETPEERVRCGKPEKGLIQLKAYHRGGNFVIEISDDGRGLNR 514 Query: 428 ERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 E+IL KA L S E ++D E+ +IF PGFSTAE+VTDVSGRGVGMDVV++ I+K+ Sbjct: 515 EKILKKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRGVGMDVVRQTIEKLR 574 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G +EI+S G GTT PLT+AI+DGM V+V E FILP A+ + L+P + + Sbjct: 575 GKIEIESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHNHIV 634 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 G + V G +P+V ++ +F++ K + IV+++ R LLVDQ+IG+ +VV Sbjct: 635 GQGETVNVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKAEVV 694 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 +K+L + + GIS I+GDG + LI+D L ++ Sbjct: 695 IKSLGEGLKDIDGISGGAIMGDGQIGLIIDPEGLFELSE 733 >UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 Tax=Clostridium thermocellum RepID=A3DDL6_CLOTH Length = 715 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 214/708 (30%), Positives = 356/708 (50%), Gaps = 75/708 (10%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E +LL +EQ L+ + E+ ++ IFR H+IKG A F + + H Sbjct: 10 MLDMFIFETLQLLDQLEQSLINSEKESGFESSIDEIFRIMHTIKGSAAMMLFDDISKLAH 69 Query: 68 LMENLLDEARRGEMQL--NTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E+L R + + +T+II++ L D ++ + + QEPD + + +R Sbjct: 70 SIEDLFFYLREEKPENVNSTEIIDIVLNGVDFIKNETVKLENGQEPDG-DASDLIKEIRD 128 Query: 126 LA------LEAKGETPSA---------------VTRLSVVAKSEPQDEQSRSQSPRRIIL 164 A ++P + ++ + + ++ + + + Sbjct: 129 YLGNLKSINNAGSDSPDSESSHTLEVEKDQKYYISSNKAASTPKSHKYEAVLKFEEQCGM 188 Query: 165 SRLKAGEV--DLLEEELGHLTTLTDVVKGA-----------DSLSAILPGDIAEDDITAV 211 ++A V DL E + DV+ G D + D+ D++ Sbjct: 189 ENIRAFSVIHDLKEIADVNYFYPEDVIDGGGKSENSEIIQKDGFRVVFSTDLGLDEVKER 248 Query: 212 LCFV------------------------IEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 L ++ + +++ K + A+EQ Sbjct: 249 LSHTILLKSLDVYVINEDLEDIMGDMPDTRETELKEQELKMDGKANVLNDSSQASEQNEH 308 Query: 248 GR-----------VEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 + T S++ + I V + K+D+L++LVGE+VI+++M+ Q + +L+ Sbjct: 309 SSGRQLSNEKKTGPSADNTASSSKQSVISVNIAKLDKLMDLVGEIVISEAMVTQ-NPDLE 367 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 + + + QL + +LQ+ VMSIRM+P+ F + R+VRD+ KL K +EL ++ Sbjct: 368 GLQLDNFHKAARQLNKLTNELQDVVMSIRMVPLSMTFQKMNRIVRDMGKKLNKSIELEII 427 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TE+DK++IERI DPL HL+RN++DHG+E P++R+A GK G + L A++ GG++ I Sbjct: 428 GEETEVDKNIIERISDPLIHLIRNAVDHGLEDPDERVAKGKPPAGKITLEAKNAGGDVWI 487 Query: 417 EVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 V DDG GL+RE+IL KA GL ++D E+ IF PGFST E VT+ SGRGVG Sbjct: 488 FVKDDGRGLDREKILKKAREAGLIHKPENELTDKEIYSFIFTPGFSTKENVTEFSGRGVG 547 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MD+V NI +GG + + S GTTI I LPLTLAI++GMS++V + +P ++ ES Sbjct: 548 MDIVSNNISMVGGTIFVDSVPDNGTTISIKLPLTLAIINGMSIKVGKSRYTIPTISIKES 607 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + + + + G ++ VRGE P++ L K + + T GI+V+++S R + Sbjct: 608 FKVKNEAVITDSEGNEMIMVRGEVYPVLRLHKFYKINTEVTNINDGIIVMVESDSRVICI 667 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 D+L+G+ QVVVK L +KV GI T+LGDGS++LI+DV+ L + Sbjct: 668 FADELLGEQQVVVKALPKYIKKVKGIGGCTLLGDGSISLILDVAGLVS 715 >UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Tax=Desulfovibrio RepID=B8DJV2_DESVM Length = 724 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 242/707 (34%), Positives = 368/707 (52%), Gaps = 75/707 (10%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 F +EA +LLA++E LL L+ + D + + +FRA H+IKG FGF + TH Sbjct: 9 RAAFIEEAQDLLAELETALLELEAQPDDRDLVARVFRAMHTIKGSGAMFGFDDIAHFTHD 68 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL 128 +E + D R GE+ + +++L L ++D + + L+ PD A I +LR L Sbjct: 69 VETVFDRVRNGEVPVTRQLLDLTLASRDHIAQLLNCAVTGDAPDLAHAAAITASLRALVP 128 Query: 129 ------------------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 A+ E P + + P S + +L L+ Sbjct: 129 VAAPPADAPADGAADGECPAETEAPCPPCARTWRVRFRPVPSILFSGANPLALLDELRDM 188 Query: 171 EVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITF----- 223 + + L ++ +L + E I V FV + + Sbjct: 189 GGAQVFPHFSEVPGLDELQPELCHVWWDVLLSSESNEAAIRDVFLFVEDDADVDILLVDD 248 Query: 224 -------------ETVEVSPKISTPPVLKLAAEQAPTGRV-------------------- 250 E + +S+ + ++ EQ P GR+ Sbjct: 249 ARIVDDAAYKRLGEILIERGDVSSDDLHRVLDEQRPLGRLLTDAGVVPPERVDAALAEQQ 308 Query: 251 ---------EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 ++E T R + SIRVA K+D L++LVGELVI Q+ L+Q + + Sbjct: 309 AVRTIRQSRDKESTARDDSGASIRVAASKLDFLVDLVGELVIVQAQLSQAA---HLRSDP 365 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L+ + +L+R + +L+++ + IRM+P+ FS++ RLVRDL+ +LGK VEL +G TE Sbjct: 366 GLLGLVEELERLSDELRDTTLGIRMLPIGTTFSKFRRLVRDLSAELGKDVELVTLGGETE 425 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDK++IER+ DPL H +RNS+DHG+E P+ R AAGK G + LSA H GG + I + DD Sbjct: 426 LDKTVIERLGDPLVHCLRNSMDHGVESPDVRAAAGKPRTGTVTLSAAHAGGEVLITIADD 485 Query: 422 GAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 GAG++ R+L A +G+ + + E LIFAPGFSTAE+VT VSGRGVGMDVVKR Sbjct: 486 GAGIDPARVLEIARRRGVIAPDVELPAREAIELIFAPGFSTAEKVTSVSGRGVGMDVVKR 545 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 +I+ + G +E+ S G GTT+ I LPLTLAI+DG+ V V E +++PLN V E + Sbjct: 546 SIEALRGRIELDSAVGRGTTLTIRLPLTLAIIDGLQVLVGGESYVIPLNHVEECAEHSTP 605 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 G +R++ +RGE +P + L ++F +G Q VV++ + G R+ L+VD ++ Sbjct: 606 S--SADGRQRIINLRGEIVPYIRLRELFASSGPAPAIEQ--VVVVDAQGSRFGLVVDCVV 661 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G+HQ V+K+L Y+ VPGIS ATI GDGS+ALI+DV L + +Q Sbjct: 662 GEHQTVIKSLGRIYKDVPGISGATIKGDGSMALILDVPGLVQLAVDQ 708 >UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax=Campylobacterales RepID=D1B4I4_SULD5 Length = 678 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 217/678 (32%), Positives = 362/678 (53%), Gaps = 41/678 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M Q F +EA+E++ M+ ++ + A D LN IFR H++KG A F FS L Sbjct: 1 MSKEKLRQIFIEEANEIIEKMDIDIVNYESAASDKALLNEIFRGVHTLKGSANAFNFSRL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E H E++LD R E N+ ++LFLE+ +++E L + ++ + Sbjct: 61 GEFVHHFEDILDFFRNSEDIPNSSHVDLFLESVSVIKETLVCDVEGSAQLPEAYGLCLEK 120 Query: 123 LRQLALEA-KGETPSAVTRLSVVAKSEPQD--------------EQSRSQSPRRIILSRL 167 ++ L L + E PS+ + + + + + Q +S I L Sbjct: 121 IQMLLLTLREPEMPSSSSSTDLTLEFDNEHFFPSSALPDVKTFLAQCQSNEKLYRITLTL 180 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGADSLSAI----------------------LPGDIAE 205 ++ + L V K S +I L + Sbjct: 181 ESDIYLRGFDHFLFFKNLLHVGKIVASFWSIPKGLEDEAFDVERNILSKVTLCLITQESR 240 Query: 206 DDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST-SI 264 + I V F+ + E V + STP ++ E + E + + + + Sbjct: 241 EAIEDVFAFLEPEEFHIEEVVPSLNEPSTPLASQVREEAVVVDKEEAKPLKSALVTKNFL 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 ++ +K+D+L + +GELVI Q+ L + +S++ + ++ ++ L + R +Q VM + Sbjct: 301 KIDAQKLDELFDSIGELVIAQNCLGE-NSKIKAIQDTEVTKTIENLSKITRLIQNRVMGL 359 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ F + R+VRD + K+ K + LTL G TE+DK+++E + DPL H++RN++DH Sbjct: 360 RMIPIRDTFEKMKRVVRDSSKKVNKPIHLTLEGEETEIDKTMVEALSDPLVHIIRNAIDH 419 Query: 385 GIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 GIE E+RL AGK+ GN+ L A H+GGNI IEV DDG G+N+ ++ KA +GL + Sbjct: 420 GIEGTQEERLQAGKSEEGNVRLRAYHRGGNIIIEVRDDGRGINKSKVYQKALERGLIEQD 479 Query: 444 N-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 +S++++ LI PGFSTA+ ++D+SGRGVG+DVV+ I+ + G V+I S++G GTT Sbjct: 480 EVLSENQIYGLIMQPGFSTADTISDISGRGVGLDVVRTAIEAVRGKVDISSQEGVGTTFS 539 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I+LPLTLAI+DGM VR +++FI+P ++ ES +P E ++H G E +++R E LPIV Sbjct: 540 IVLPLTLAIIDGMLVRSNEKIFIIPTLSITESFRPLEQNVHSARGKEEFVQLRSELLPIV 599 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L V ++ + +V +++ ++ALLVD+L+G+ QVV+K L + K GIS Sbjct: 600 RLNHVLDIDENAPPPWECTLVCVENSRGKFALLVDELVGRQQVVIKTLGAFLVKTEGISG 659 Query: 623 ATILGDGSVALIVDVSAL 640 ++G+G +ALI++V L Sbjct: 660 GAVMGNGEIALILNVEEL 677 >UniRef50_Q04U49 Chemotaxis protein histidine kinase n=5 Tax=Leptospira RepID=Q04U49_LEPBJ Length = 1078 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 214/707 (30%), Positives = 360/707 (50%), Gaps = 67/707 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ + ++ + F +E+++ + ++ +LL L+ + + +N IFRAAHS+K A G Sbjct: 1 MAGILGEYTELFLEESEDQIEELNINLLRLEADHKNLSIINDIFRAAHSLKSSAAFVGLY 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L + H MENLL R G++Q+ ++NL + D+++ + + + + + D I Sbjct: 61 NLSDLAHKMENLLQLTRDGKLQVKLPLVNLLFQCFDLIKYVIRSVAEGNKIETPFTDMI- 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL---------------- 164 ++L K T + + A++ P S P + + Sbjct: 120 ---QKLDAYEKDPTSFSNVAGASSAQAAPFSNAPASSVPAQKSVEALATSAASSAPAKSV 176 Query: 165 -------------------------------------SRLKAGEVDLLEEELGHLTTLTD 187 S +K L+ + L +L + Sbjct: 177 SYSGLEIHLEAEEVRELEEEIRKSGKCWKISVTLGKDSPMKGLRFSLILQNLKNLGVVFK 236 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 V + L + + + VE P ++ A Sbjct: 237 SVPDLEELDKGMDVTSIALLFISSESLEQIRTAANVDMVEFLDVQEYVPTVQEAVTANFK 296 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-----DPVNHGD 302 + + SI+V+ +K+DQL+N VGEL+IT S + +L + D Sbjct: 297 IEDDMAASESRVTLKSIKVSSDKLDQLMNNVGELIITNSGFQRIYDDLIRVFGEDQLFND 356 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L + + + R +++LQ +M+IRM+ + VF R+ RLVRDL+ + GK+V L L G STEL Sbjct: 357 LKSRIDLINRISKELQSGIMNIRMVQISTVFRRFSRLVRDLSLETGKKVNLVLSGESTEL 416 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK +I+ + +PL HL+RNS+DHGIE P +RLAAGK VG L L++ G NI +E+ DDG Sbjct: 417 DKKVIDALGEPLLHLIRNSVDHGIETPAERLAAGKPEVGTLELNSYQGGSNIMVEIRDDG 476 Query: 423 AGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 GL+ E+IL+KA +GL + N+S+ E+ IF GFSTAE+VTD+SGRGVGM+VV Sbjct: 477 RGLDSEKILSKAIEKGLVGATEASNLSEQEIFQFIFQAGFSTAEKVTDISGRGVGMNVVN 536 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 IQ+ G + I S +G G++ + P LAI+ + V + +EV+ PL+ V E+++ Sbjct: 537 NLIQEFKGKIIINSVKGQGSSFVLSFPQALAIIPSILVLMEEEVYAFPLSEVNETIKINN 596 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + L G E ++ +RGE LPI L ++ + KT+ + VVI+Q GR+ +VD+L Sbjct: 597 DQITTLEGNE-IINLRGEVLPIYRLNRIIGL-QDKTDREEFPVVIVQYKGRKIGFMVDEL 654 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 +G+H+ V+K+LE N++ + G++ A+I+GDG++ +++D+ + I E Sbjct: 655 VGKHETVIKSLEKNFKNIRGLTGASIMGDGTIIMVLDIPGIVEIASE 701 >UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=13 Tax=Proteobacteria RepID=Q47GY3_DECAR Length = 741 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 239/729 (32%), Positives = 363/729 (49%), Gaps = 106/729 (14%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E LADME LL L+ D + +N IFRAAH+IKGG+G ++ Sbjct: 1 MDEITSVFIQESREQLADMEAGLLQLEQNPNDHDNINGIFRAAHTIKGGSGVIECHFIEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDA---ASFDYIC 120 TH +ENLLD R E+ ++ + L LE D M ++ +S+ PDA A D + Sbjct: 61 FTHRVENLLDALRNNELAVSPPLATLLLECCDHMVSLIEVLAAESEAPDAECQARGDALT 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR-----------------------SQ 157 + L+ L+ KGET + S+ + +S Sbjct: 121 ERLKHF-LDGKGETAATPEASSLAVHDATVEVESSGGGIVLTDSWHISVRFGENVLRGGM 179 Query: 158 SPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFV 215 P I GE+ +E + ++ + L ++ DI V FV Sbjct: 180 DPLSFIRYLSTLGEILGIETISEAMPAAAEMDPESCYIGFEIQLQTRSSKADIERVFDFV 239 Query: 216 IEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV------------------------- 250 + + + +L + G + Sbjct: 240 RDDCDLRILPPNSKLSEYIKHIQELPEDTMRLGEILVRCGALTQGELDQGLLSQKFSAEN 299 Query: 251 -EREKTTRSNESTSIRVA---------------------------------VEKVDQLIN 276 + + ++ I V +K+DQLI+ Sbjct: 300 LSPDNASPGHQLGEILVDHRVVLKEIVDAAVVKQAQINDKKAKEARLVRVQADKLDQLID 359 Query: 277 LVGELVIT---QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 LVGELVI ++LAQ+S + GDL+ + L R ++++S + +RM+ + F Sbjct: 360 LVGELVIAGASANLLAQKSKQ------GDLVEATSVLSRLVENIRDSALQLRMVQIGDTF 413 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 +R+ R+VRD++ +LGK++EL + G+ TELDK+++E+I DPL HLVRNSLDHGIE RL Sbjct: 414 TRFNRVVRDVSKELGKEIELVISGAETELDKTVVEKIGDPLMHLVRNSLDHGIEPTAVRL 473 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAM 452 GK + G + L+A H G+I IE++DDG GLN+E+I AKA +G+ E +SD E+ Sbjct: 474 ERGKPACGRVALNAFHDSGSIVIEISDDGGGLNKEKITAKALERGVIQPGETLSDSEIVN 533 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 LIF PGFST ++V+++SGRGVGMDVV+RNIQ + G V++ S G G T I LPLTLAI+ Sbjct: 534 LIFEPGFSTVDKVSNLSGRGVGMDVVRRNIQALRGAVDVASVDGQGATFTIRLPLTLAII 593 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 DG V V +++PL+ V+E + +L L +RGE LP + L ++F V G Sbjct: 594 DGFLVGVGKAAYVIPLDTVVECI-----ELKNQLTERNFLNLRGEALPFIRLRELFEVPG 648 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 +V++Q GG+R ++VDQL+G+ Q V+K L + +R + GI +TILG G VA Sbjct: 649 EPPPRE--SIVVVQFGGQRAGIVVDQLMGEFQTVIKPLGAMFRHLRGIGGSTILGSGEVA 706 Query: 633 LIVDVSALQ 641 LI+DV+AL Sbjct: 707 LILDVAALV 715 >UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCN6_CELJU Length = 735 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 237/735 (32%), Positives = 365/735 (49%), Gaps = 91/735 (12%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ QTFF EA +LL ME LL L + D E LN +FRA H+IKG AG FG + Sbjct: 1 MNLDSALQTFFAEAADLLDVMEAALLRLDEDVEDRETLNELFRAVHTIKGSAGLFGLDDI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH +ENLLD AR G++ L+TD++++ L +D + +D + +Q D Q Sbjct: 61 VRFTHTVENLLDHARDGKITLSTDLLSILLPCRDHIVLLVDHARHNQTNDEQCLAQGQQL 120 Query: 123 LRQLAL-------------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 L LA A S T + A SE + + R ++ + + Sbjct: 121 LASLAPWLGSSSSAQSSPTSAPVAAHSQYTPAAAGALSEKEAWHISVRLGRDLLRNGMDP 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDI------------AEDDITAVLCFVIE 217 + LG +T + + L P D+ ++ +I FV + Sbjct: 181 LSIIRFLNTLGQVTHIATLADNLPPLEQYDPEDLYLGFEISLLSQASQQEIEDAFMFVRD 240 Query: 218 ADQITFETVEV--------------------------------SPKISTPPVLKLAAEQA 245 I + + + A EQ Sbjct: 241 DSDIKIIPPRSNVQAYINLIKSLPENIHRLGEILVKSHAITYRELEDALAAQKQQAIEQK 300 Query: 246 PTGRVER-----------------------EKTTRSNESTSIRVAVEKVDQLINLVGELV 282 P R+ + S E+ IRV +++D+LINL+GELV Sbjct: 301 PVPRIGTILVDNQVVAAEIVDAAVDKQKTINERKNSPENRFIRVDADRLDKLINLIGELV 360 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 I + + S L + +T+MG ++++ +++RM+P+ F ++ R+VRD Sbjct: 361 INRQRIDLLVSSLANPVLSEAVTTMGSF---TEQIRDAALTLRMVPIGETFHKFKRVVRD 417 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 A LGK+++L + G+ TELD+S++E++ DPL H+VRN++DHGIE R K + G Sbjct: 418 TARSLGKEIDLVIEGADTELDRSMVEKLNDPLMHIVRNAMDHGIESVHVRRERNKPAAGT 477 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFST 461 L L+A H GNI I ++DDG GL+ ERI KA + GL +S E+ LIF PGFST Sbjct: 478 LKLTARHDAGNIVIGISDDGGGLDVERIRKKAFANGLIDDSMQLSQQELFQLIFHPGFST 537 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 AEQVT++SGRGVGMDVV+RNI+ + G ++I S+ G GT I LPLTLAI+DG V + Sbjct: 538 AEQVTNLSGRGVGMDVVRRNIEALQGGIDIDSELGAGTQFTIRLPLTLAIIDGFHVAASA 597 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 FI+P N ++E + + G+ + +RG+ +P + L +FN+ A+ E + Sbjct: 598 VDFIVPQNTILECVDLKS---LNHIQGQHCVNLRGDQVPYIRLRDIFNLPTAEVEREK-- 652 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL- 640 +V++Q G +R L+VD+L G+ Q VVK + ++ + GI +++LG G+VALI+D+ L Sbjct: 653 IVVVQFGDKRAGLVVDELHGEIQTVVKPMGPIFQALKGIGGSSLLGTGAVALILDIQQLI 712 Query: 641 -QAINREQRMANTAA 654 AI +EQ N A Sbjct: 713 HFAIAKEQVRNNIAG 727 >UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepID=Q1GMD6_SILST Length = 711 Score = 572 bits (1475), Expect = e-161, Method: Composition-based stats. Identities = 222/692 (32%), Positives = 367/692 (53%), Gaps = 59/692 (8%) Query: 22 DMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEM 81 M++ L ++ D E +NA+FRA HSIKGGAG FG L H E + DE R ++ Sbjct: 19 AMDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDDLVAFAHKFETVFDEVRSNKL 78 Query: 82 QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ---ALRQLALEAKGETPSAV 138 QL+T +I L L D + + + + D D + E P + Sbjct: 79 QLDTKLIQLLLRCSDHLSDLVSVSRDGGSVDEEHNDVLIAGLEEYLDEEEEELTFEPMGL 138 Query: 139 TRLSVVAKSEPQDEQS-------------RSQSPRRIILSRLKAGEVDLLEEELG-HLTT 184 SV ++E++ P + + + G ++++ ++ Sbjct: 139 GGPSVPLPLAMEEEKTYEIRFRPLKEMFGTGNEPFFLFQALSELGPLEVVLDDTELPGFD 198 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET------------------- 225 + + + L + + AV FV +++ + Sbjct: 199 AMAMDDSYLAWNLTLTTTEPKSAVEAVFEFVEGLCELSITSDKDEEEDAAALAALNAAFG 258 Query: 226 ---VEVSPKISTPPVLKLAAEQAP-----------TGRVEREKTTRSNESTSIRVAVEKV 271 P+ P + AE P T + E K+ + ++RV +E+V Sbjct: 259 VPGDSAEPETPAPFDVPAPAEATPMATSETTQKVETVKPESNKSEQRGPKPTLRVDLERV 318 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D+LIN VGEL+I SMLAQ+ + LD + D+ T + + ARD+QE VMSIR P++ Sbjct: 319 DRLINAVGELIINHSMLAQQIANLDVADLRDVETELEGFKNLARDIQEGVMSIRAQPVKP 378 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 +F R R+VR+ + K +L G +TE+DK++IER+ DPLTH++RN++DHGIE PE Sbjct: 379 LFQRMARIVREASSATEKSAKLITEGENTEVDKTVIERLSDPLTHILRNAVDHGIEKPED 438 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEV 450 R AAGKN G + LSA H+ G++CIE+ D+GAG+NR R+ A +GL +++D E+ Sbjct: 439 REAAGKNRTGEIRLSASHRSGSVCIEIKDNGAGINRPRVKQIAIEKGLIPENADLTDAEI 498 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 L+F PGFSTA++V+++SGRGVGMDVVK + +GG + + S G G+T I+LPLTLA Sbjct: 499 DNLLFLPGFSTAKEVSNLSGRGVGMDVVKNAVTALGGRINVSSTPGKGSTFTIILPLTLA 558 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 ++DGM V VAD+ ++P+ +++E+++ + ++ L +L +RG ++PI ++ + Sbjct: 559 VMDGMVVSVADQTMVVPITSIIETMRGSDDMINSLGADGTLLSIRGNFVPICDVAGALGL 618 Query: 571 AGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDG 629 + + G+ +++++ G+R AL VD + Q QVV+K+L+ +PG++AATILGDG Sbjct: 619 RKPEGDKPPGVYLLVETETGQRSALAVDDIHDQRQVVIKSLDGVCGNIPGVAAATILGDG 678 Query: 630 SVALIVDVSALQAIN-------REQRMANTAA 654 +A+I+D ++ A + ++RM+N A Sbjct: 679 KIAMILDSESIIAASPTSATFDSDRRMSNAIA 710 >UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6G6_9PLAN Length = 895 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 212/662 (32%), Positives = 328/662 (49%), Gaps = 58/662 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F E+ E L ++ ++ L+ + +AE + +IFR H+IKG G G + L Sbjct: 1 MDDILQEFLAESWENLGQLDSEIVELEKDPQNAELIASIFRTIHTIKGTCGFLGLTNLGA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R ++++ I+L LE D ++E L + + E + L Sbjct: 61 VAHSAENVLGKMRERMLEVSPGAISLVLEAIDRIKELLQGLEATGEEPKTDHSTLTLMLD 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +LA A P + + V E++ Sbjct: 121 ELANLATA--------------------------PLESPPQQPPSAPVSGQVEDISVENQ 154 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + D G S + I + +E + P++ L Sbjct: 155 VEDKPLGGPSPTDIADSNESE----------------PAALTDSHPEVLAESADPLTPAA 198 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 T + S SIRV V VD L+NLVGELV+T++ L Q + + + I Sbjct: 199 GGTEEGAVRSSKVSVADLSIRVNVNVVDSLMNLVGELVLTRNQLLQLARGDEESKYAAPI 258 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 T L R DLQE VM RM P+ +++ PRLVRDL+ K +EL + G+ TELD+ Sbjct: 259 T---HLNRVTTDLQEGVMKTRMQPIGNAWNKLPRLVRDLSQVTNKHIELVMTGAETELDR 315 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ I DPLTH+VRNS DHGIE E R AAGK G + L+A H+GG++ IE+ DDGAG Sbjct: 316 TVLDAIKDPLTHMVRNSADHGIESSEVRKAAGKAESGTIHLNAYHEGGHVIIEIQDDGAG 375 Query: 425 LNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 ++RER+L KA SQGL + +++D V +IF GFSTAEQV+ +SGRGVGMDVV+ Sbjct: 376 ISRERVLKKAISQGLIKEVDAPHVTDSHVFSMIFQAGFSTAEQVSSISGRGVGMDVVRTQ 435 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+K+GG V++ SK G GTT+RI +PLTLAI+ + + + F +P V+E ++ D Sbjct: 436 IEKIGGTVDLNSKMGKGTTVRIKIPLTLAIVSALVLESGSQPFAIPQLGVVELVRLSAED 495 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLV 596 + ++V +R LP+V L +V + + +V++Q G ++ L+V Sbjct: 496 CKKIETIHDKKVFRLRDRLLPLVHLNEVLQLEEDTPKDDDLQDTNIVVVQVGEDQFGLIV 555 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ-----AINREQRMAN 651 ++ ++VVK + + + TILGDG V +I+DV + + Q +A Sbjct: 556 SRIFDTEEIVVKPVGRLLKNIGLYQGTTILGDGRVVMILDVGGIFNQCGGSSAHSQSVAE 615 Query: 652 TA 653 A Sbjct: 616 EA 617 Score = 51.0 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 10/120 (8%) Query: 511 ILDGMSVRVADE-VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 + + V D +PL+ V + + L G +V++ R LP++ + Sbjct: 625 TISMLLFGVKDNVTMAVPLSLVARLEEFPLESIE-LNGDRKVVQYRDNLLPLLSIEGA-G 682 Query: 570 VAGAKTEATQGIVVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKVPGISAATILG 627 G + V++ R L+V+++ Q+V++ PG+ I+G Sbjct: 683 FGGGEP-VDPQPVIVFSENNRSMGLMVNEIKDIIDEQLVIR----MQSDRPGVLGTAIIG 737 >UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK) n=40 Tax=Bacteria RepID=Q2RX20_RHORT Length = 942 Score = 570 bits (1470), Expect = e-161, Method: Composition-based stats. Identities = 213/667 (31%), Positives = 323/667 (48%), Gaps = 31/667 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D F E E +A ++ L+ L+ D L+ IFR H+IKG G G L+ Sbjct: 1 MDDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLES 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R G++++ + + L T D ++E L + ++ + L Sbjct: 61 LAHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLN 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A+G+ PS A++ + E Sbjct: 121 AF---AEGKQPSVAAMAPAPARAAGSGPAISEGGYPVAAELLAEVSE--------AVAKG 169 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + AE AV V E V P V Sbjct: 170 KRAATEAELAAELAAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTN 229 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P G E+ S S SIRV VE ++ L+ LV ELV+T++ L Q D + + Sbjct: 230 GPNGGGGGEQKEGSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVRGSDD---SEFV 286 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L DLQE VM RM P+ +++ PR+VRDL+ ++ K+++L + G+ TELD+ Sbjct: 287 APLQRLSHITTDLQEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDR 346 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++E I DPLTH+VRNS DHG+E P++R AAGK G + L+A H+GG+I IE++DDG G Sbjct: 347 QVLEMIKDPLTHMVRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRG 406 Query: 425 LNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 LN ERI AKA S GL ENM+D ++A IF G STAE+VT VSGRGVGMDVVK N Sbjct: 407 LNLERIRAKALSNGLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTN 466 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+K+GG VE+++ G G+ I +PLTLAI+ + V + E F +P +V+E ++ Sbjct: 467 IEKIGGTVELKTWPGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANS 526 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTE------------ATQGIVVILQS 587 + VL +R +P+V L + + E + +V+ Q Sbjct: 527 ETTIEQINTAPVLRLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQV 586 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G + ++VD++ ++VVK + R V S TILGDGSV +I+D + + + E Sbjct: 587 GTYTFGIIVDRVFDTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILDPNGIASATGEV 646 Query: 648 RMANTAA 654 M + + Sbjct: 647 TMGSASG 653 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 55/127 (43%), Gaps = 11/127 (8%) Query: 512 LDGMSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 + R + +PL V + + + G+ V++ RG+ +P+V + F + Sbjct: 669 TSLLVFRAGGKDLKAVPLALVARLEEIETDKIEH-SFGKPVVQYRGQLMPLVGIHDEFTL 727 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR-KVPGISAATILGDG 629 AG + V++ R L+VD+++ +V +L+ R + G+ ++ +G Sbjct: 728 AGE----GRQPVLVFSDRDRTMGLVVDEIV---DIVEDHLKVELRADLRGVVGTAVV-NG 779 Query: 630 SVALIVD 636 I+D Sbjct: 780 KATDIID 786 >UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 Tax=Alphaproteobacteria RepID=Q20XD8_RHOPB Length = 686 Score = 569 bits (1468), Expect = e-161, Method: Composition-based stats. Identities = 238/692 (34%), Positives = 359/692 (51%), Gaps = 54/692 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D + F EA +L +E LL L D E ++ FRA H+IKG FGF + T Sbjct: 5 DPVEVFRQEASDLFEALEGALLDLGSRPDDRELIDTTFRALHTIKGSGAMFGFDKVATFT 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H E D+ R+GE++ + D+I++ L KD ++ ++A + + D+ D I LR+ Sbjct: 65 HEFETAFDQVRKGEIKASQDLISVALSAKDYIRALIEAPEST---DSIIGDAILDELRRF 121 Query: 127 ALEAKGETP-------SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV--DLLEE 177 P SAVT + + Q + R ++ + + DL + Sbjct: 122 VAPTADRGPDEEHSIASAVTTAPPAPATAGRGWQLHIEFDRDVLRNGSNPLDYLDDLRKL 181 Query: 178 ELGHLTTLTDVVKGADSLS---------AILPGDIAEDDITAVLCFVIEADQITFET--- 225 T LT+ V D L L D I V FV + ++ E Sbjct: 182 GTAFATALTEDVPLLDELEPELCFLKWDVTLNSDCDRAAIDDVFMFVQDEMVLSCEPLPE 241 Query: 226 ---VEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST----------------SIRV 266 V P I++P + R E E + +T ++RV Sbjct: 242 TAVVAPQPMIASPSLAPNPTVATAPRRAEPEADKPATAATKSKGDEQRRFDDKGMPTVRV 301 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 +++D+L++ VGELVI Q+ L+Q ++ D ++ + +++R A L+++ M RM Sbjct: 302 QAQRLDELMDRVGELVIAQARLSQLAAATDDIS---IKAIAEEIERLAAGLRDTTMGARM 358 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 +P+ +F R+ RLV DL+ LGK V+ G TELDK++IER+ DPL HL+RN++DHGI Sbjct: 359 VPIGSLFGRFRRLVHDLSRDLGKPVDFVTSGEDTELDKTMIERLADPLVHLIRNAIDHGI 418 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-M 445 E R AAGK +G + ++A H G + + V D+GAGLN RI AKA QGL + Sbjct: 419 EDTASRAAAGKTEIGRIEIAAIHSGAQVLVTVRDNGAGLNAARIRAKAEEQGLIQPGAVL 478 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 SDD+V L+F PGFSTA+ ++ +SGRGVGMDVVKR I M G ++I ++ G GTT+ + L Sbjct: 479 SDDDVHQLLFQPGFSTAQTISTLSGRGVGMDVVKRTIDAMRGSIDISTQHGRGTTVTLRL 538 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLAI++G+ +RV + +I+PL AV E + + G L +RG+ +P + L Sbjct: 539 PLTLAIIEGLLIRVGEGRYIIPLAAVEECAELSAEEER--VRGRDFLNMRGDLVPFLRLR 596 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 +F V G + ++I SG R L+ DQ+IG HQ V+K+L + V S ATI Sbjct: 597 DLFEVGGQPDRHQK--IIIASSGETRVGLIADQIIGSHQSVIKSLSKLHSDVTMFSGATI 654 Query: 626 LGDGSVALIVDVSALQAINR---EQRMANTAA 654 LGDGS ALI+DV+ L AI + + ++ N AA Sbjct: 655 LGDGSAALILDVAQLLAIGQSLGDGKLTNEAA 686 >UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA26_9FIRM Length = 690 Score = 568 bits (1465), Expect = e-160, Method: Composition-based stats. Identities = 208/693 (30%), Positives = 348/693 (50%), Gaps = 48/693 (6%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTF 57 M++D + F E LL +++ LL + + +N IFR H+IKG A Sbjct: 1 MAIDPSMEPMLDVFIYETTTLLDQLDEILLDAEKSKSFSEDNINEIFRIMHTIKGSAAMM 60 Query: 58 GFSVLQETTHLMENLLDEARRGEM---QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 + + H +E++ R ++ I +L + D ++++++ + + E + Sbjct: 61 DLNGISTLAHSVEDVFFIIREDPARMASISEAIFDLVFQASDFLKDEVECVQNTHEANKD 120 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII----------- 163 I L ++A KGE P+ A + + + Sbjct: 121 P-SAIIAELEKMAAIMKGEAPAPTAAGVPAASAAAEAAPAAQAPAAEQAGEICRIRIFFD 179 Query: 164 -LSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 +++ +L +L L + A +I ++ + ++ +I Sbjct: 180 DDCQMENIRAFMLVSQLKDLCADLTTIPANPENDASCCTEIIKNGFEMIFKPLVPMSEI- 238 Query: 223 FETVEVSPKISTPPVLKLAAEQ--------------------APTGRVEREKTTRSNEST 262 F+ +E S + VL E + + + + + Sbjct: 239 FQVIESSVNVKNYTVLHDEPEPQSPAPAAAAKPAAAPAKPAVSASSAPKPSDALPKTKQS 298 Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 + V K+DQL++LVGELV T+SM+ + +L + + S +L + +LQ+ VM Sbjct: 299 LVSVNQAKLDQLMDLVGELVTTESMVVS-NPDLKGLRLDNFNKSTRELHKLTDELQDVVM 357 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 SIRM+P+ VF + R+VRD++ KL KQVEL G TE+DK++ E I DP H++RNS+ Sbjct: 358 SIRMVPLSGVFQKMNRIVRDMSKKLDKQVELVTEGGDTEVDKTINEAIGDPFMHMIRNSM 417 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV- 441 DHGIE E+R A GK +G + + A++ G I I + DDGAGLN E +L KA GL Sbjct: 418 DHGIEPIEERRAKGKPDIGRITMIAKNIGSEIVITIADDGAGLNPEVLLRKARENGLLTK 477 Query: 442 -SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 ++ E+ LI PGFST ++VT+ SGRGVGMDVV++NI+K+GG + I S++ GTT Sbjct: 478 PESEYTEKEIFGLIMLPGFSTNKEVTEFSGRGVGMDVVRKNIEKVGGTLSIDSERDKGTT 537 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP-READLHPLAGGERVLEVRGEYL 559 I +PLTLAI+DGM + + ++ LP+ ++ +S + + + G ++ +RGE Sbjct: 538 FIIKIPLTLAIVDGMELEIGSTIYTLPIASITQSFKIYDNSQILHNTDGTEMIMLRGECF 597 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP- 618 P++ L ++F+V TE GIV+++++G L D+L+G+ QVVVK + K Sbjct: 598 PLIRLHRLFDVETQITELGDGIVILIENGTSAACLFADKLLGEQQVVVKPFPTFLNKYAI 657 Query: 619 ---GISAATILGDGSVALIVDVSALQAINREQR 648 G+S TILGDGS++LI+D +AL +N+E+R Sbjct: 658 KQIGLSGCTILGDGSISLILDANALLNLNKERR 690 >UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 Tax=Proteobacteria RepID=A5G5U7_GEOUR Length = 712 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 243/705 (34%), Positives = 365/705 (51%), Gaps = 75/705 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA ELLA++E LL L+ D E + +FRA H+IKG FGF + Sbjct: 2 MDQHREAFKEEAYELLAELETSLLELEERPDDEELIGRVFRAMHTIKGSGAMFGFDDIAA 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E + D R G++ + +IN+ L +D ++ LDA + DA + I L+ Sbjct: 62 FTHQVETVFDLVRNGKVSVTKKLINVTLAARDQIKAMLDASTGGEPVDAGVAEEIIAELK 121 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQD---EQSRSQSPRRIILSRLKAGEVD------LL 175 L + K P A + + Q Q + I G L Sbjct: 122 SLLSDTKALAPLAGANATGTTQEPGQGRDLPQPTTTPVTYRIRFEPDRGLFARGTNPITL 181 Query: 176 EEELGHLTT--------------LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 ELG L D IL D I V FV + ++ Sbjct: 182 VNELGELGECKVVAQMCNLPRLDEIDPESCYIFWDVILTTAQGIDAIKDVFIFVEDDCEL 241 Query: 222 TFETVEV--------------------------------------------SPKISTPPV 237 E ++ + + + Sbjct: 242 KIEVIDTGGHLGHDGDYKKLGEILVERGDLTHEAMEKILSQQKRFGEIAVETGLVEADRI 301 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 EQ V +E+ ++ S SIRV EK+D L+NLVGELV Q+ L+Q S+ Sbjct: 302 ASALVEQQHVKEVRQERQSQETAS-SIRVPAEKLDILVNLVGELVTVQARLSQTSA---G 357 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 +L++ +++R +L+++ ++IRM+P+ FS++ RLVRDL+ +LGK+VE+ G Sbjct: 358 RRDAELMSIAEEVERLTAELRDNALNIRMLPIGSTFSKFKRLVRDLSNELGKKVEMETAG 417 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 + TELDK++IE++ DPL HL+RNS+DHGIELP+ R AAGK G + L+A H G ++ I Sbjct: 418 AETELDKTVIEKLNDPLVHLIRNSIDHGIELPDVREAAGKPGQGTVHLAAVHSGDSVLIT 477 Query: 418 VTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 + DDGAGL++E I KA +GL + ++S+ E+ LIFAPGFSTA++V+ VSGRGVGMD Sbjct: 478 IRDDGAGLDKEAIRTKAIEKGLIPAAADLSEKEIFNLIFAPGFSTAKKVSSVSGRGVGMD 537 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVKR I + G ++I SK G GTTI + +PLTLAI++ + VR+ + F+LPL+ V E ++ Sbjct: 538 VVKRAIDALRGSIDITSKHGDGTTITVKIPLTLAIIESLLVRIGADRFLLPLSLVDECVE 597 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 AD+ A G + VR +P + L + F++ G + Q +VI + G R ++V Sbjct: 598 LTRADVEK-AHGRNLATVRDHMVPYIPLRERFDIKGETPDIEQ--IVITKVDGMRVGVVV 654 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 D +IG+HQ V+K+L Y+ V IS ATILGDG+VALI+D+ L Sbjct: 655 DHVIGEHQTVIKSLGRAYKNVDAISGATILGDGAVALIIDIPQLV 699 >UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NX21_HALMD Length = 649 Score = 568 bits (1464), Expect = e-160, Method: Composition-based stats. Identities = 209/655 (31%), Positives = 331/655 (50%), Gaps = 28/655 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F E++E + ++ LL L+ + D E + +IFR AH++KG G GF Sbjct: 3 DQYLDAFIRESEEAITELNNSLLDLESDPEDTEAMESIFRTAHTLKGNFGAMGFDDASSL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E+LLDE R G M + D+++L D ++ + ++ E D I LR Sbjct: 63 AHAIEDLLDEMRDGNMPVTPDVMDLIFAGVDKIEAIVSEIEEHGE-SGTDVDEIVDDLRT 121 Query: 126 LALEA-------------KGETPSAVTRLSVVAKSEPQDEQSRS--QSPRRIILSRLKAG 170 + E E P T + E + S + II + + G Sbjct: 122 VLEEGVDAAEGAADDADGPDEAPDDTTDTDSSGDGDVAVETNVSPDTADDSIIAAEIDIG 181 Query: 171 EVDLL-EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 + D+L + + + + D D+ + E T L E T+ Sbjct: 182 DSDMLGVDAMLAIEAVEDYFDVLDAAPQREAVEDGEFSDTFTLYLDAEDTGTVDNTLSGI 241 Query: 230 PKISTPPVLKLA-AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 KI + + A +G E + +E S+RV V+++D L LV +LV ++ L Sbjct: 242 GKIESAETADVTDALSEKSGSTSDETEHKVDEIKSVRVDVDQLDDLHGLVEQLVTSRIKL 301 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 + + D G+ ++ +L + +LQ +VM +R++P++ V ++PRLVRDL+ LG Sbjct: 302 RRAVEQDDLDGAGE---NLNELDKITANLQNTVMDMRLIPLKKVVGKFPRLVRDLSRDLG 358 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K+V+ + G ELD++++ I DPL H++RNS+DHGIE PE R GK G + L A Sbjct: 359 KEVDFEIEGEDIELDRTILTEISDPLMHILRNSVDHGIEPPEVREEKGKPRTGTVELRAS 418 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQV 465 + ++ I+V DDGAGL+ E I KA +G+ E M D + L+F PGFSTA+QV Sbjct: 419 RERDHVIIQVEDDGAGLDVEAIRDKAIEKGVRSPEELEAMDDSSIYDLVFHPGFSTADQV 478 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 TD SGRGVGMDVV + ++ G V ++S G GTT+ + LP+T+AI+ + V V DE + Sbjct: 479 TDTSGRGVGMDVVHDTVTQLDGSVNVESTPGEGTTVSLRLPVTMAIVKVLFVEVGDEEYG 538 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVIL 585 +PL V E + AD G+ V++ E PI++L + F+ G +T G++V + Sbjct: 539 IPLKNVDEITR---ADDRKQVNGKDVIKHNDEIYPIIQLGETFDAPG-ETANGDGMLVRV 594 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 + R+ AL D + Q +VVVK LE PG+S +LGDG++ I+DV L Sbjct: 595 RESERQVALHCDSVNSQEEVVVKPLEGILSGTPGLSGTAVLGDGNIVHILDVVTL 649 >UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G689_GEOUR Length = 671 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 206/657 (31%), Positives = 362/657 (55%), Gaps = 29/657 (4%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAP----DAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F EA+E++ + L+ L A + + +N+IFR AHS+KG AG FGF+ + E Sbjct: 13 KDFLAEAEEIIDQLSLDLVALSDCADGGDFNPDLVNSIFRGAHSLKGLAGMFGFTDIAEL 72 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H MENLLD R G++ L+ + I++ E+ +++ + + + + + Sbjct: 73 SHNMENLLDSLRLGKVSLSQNTISVLFESMELLGTLVQSAGTADRQLHDISQAVARISSC 132 Query: 126 LALEAKGETPSAVTRLSVVAKSE------PQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + K E+ S + +L + + + + R I S L + + +++L Sbjct: 133 VCAVQKEESVSPLAKLGLSERVLGSLTEYEEHRLLENVKKGRRIFSILASFSLATFDQDL 192 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI------- 232 G L TDV+K A + + LP + + + +++++ E + + Sbjct: 193 GEL---TDVLKSAGEVISTLPSAGGGLESSINFEILFGSEKVSAEVTALIDRDNITVMLL 249 Query: 233 --STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 +P E AP+ E T +S S ++RV + K+D+L+N+VGELV++ S ++Q Sbjct: 250 GGESPSQPAEMQEMAPSLAPEASMTAKSM-SRTVRVDISKLDELMNIVGELVLSHSTISQ 308 Query: 291 RSSELDPVNHG----DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 + + + +L + L+R +LQ+ VM IRM+P+ +F + R+VR ++ + Sbjct: 309 LAGRMRLDGYSAPSIELTKAAKGLERKLTELQKGVMEIRMIPVGQLFEKMARIVRKISRE 368 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 GK+VEL + G+ TELDK +IE I DP+ H++RNS+DHGIE PEKR+ AGK+ G + LS Sbjct: 369 QGKKVELKMFGADTELDKLIIEDISDPMMHIIRNSIDHGIETPEKRILAGKDEKGVIKLS 428 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQV 465 + +G ++ I+V DDGAG++ E++ KA +GL S E + D E LIF PGFST+++V Sbjct: 429 SYQKGNHVVIQVEDDGAGIDIEKVKRKALEKGLIPSIEAIHDKEALDLIFLPGFSTSDKV 488 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 +++SGRGVGMDVV+ NI + G V+++S G G+++ I LP+TLAI+ + + + Sbjct: 489 SEISGRGVGMDVVRTNIAALSGMVDVESYPGEGSSMIITLPITLAIIKALIISSVGRTYA 548 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVIL 585 LP+ +V+E++ D+ + + V+++R LP++ L K F + VV++ Sbjct: 549 LPITSVLETILVERKDVRTVE-KKEVIQLRENTLPLLRLGKFFETETQGEQQENFYVVVV 607 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 + +R ++VD L+GQ +V+K++ ++ GIS A LGD L++DV + Sbjct: 608 GAAEKRLGMVVDDLLGQQDIVIKSIGETFKGFKGISGAADLGDQRTILVLDVGGIIN 664 >UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGC3_PLALI Length = 910 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 214/646 (33%), Positives = 330/646 (51%), Gaps = 37/646 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD D Q F E+ E LA ++ ++ L+ E ++ L +IFR H+IKG G GF L Sbjct: 1 MD-EDILQEFLAESWENLAQLDTEVVALEKEPSNSPLLASIFRTIHTIKGTCGFLGFEHL 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H EN+L + R GE+ + + I+L L+ D ++ L+ +++Q + Sbjct: 60 GKVAHATENVLGKMRDGELDVTNEAISLVLDGVDTIKHLLETIEKTQAEPELDTSALIHK 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L LA + V A +PQ + + + + E G L Sbjct: 120 LDLLASLSSP----VSQPRHVPAPIQPQVLSGGTTASQPVNFQHP---------ESTGEL 166 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 T + S + ++A + E D + + + + P + Sbjct: 167 NT--------EQTSPATAVTSSAPVVSANVSKAAEVDPGSNRNGKPAAMAAAPNSANGES 218 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + GR SIRV VE +D+L+NLVGELV+T++ L Q D Sbjct: 219 DSDNEGRRSAAVDL------SIRVNVEVLDKLMNLVGELVLTRNQLLQMVRGEDESR--- 269 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + L R DLQE VM RM P+ +S+ PRLVRDL+ KQ+EL + G+ TEL Sbjct: 270 FQVPVTHLNRVTTDLQEGVMKTRMQPIGNAWSKLPRLVRDLSQVTSKQIELEMHGAETEL 329 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPLTH+VRNS DHGIE E R GK+ G + L A H+GG++ I V DDG Sbjct: 330 DRTVLDAIKDPLTHMVRNSADHGIEKAEIRRKQGKSESGTIRLKAFHEGGHVIIHVEDDG 389 Query: 423 AGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 AG++ ER+ K +GL ++S++E+ IF PGFSTAE VT VSGRGVGMDVV+ Sbjct: 390 AGIHVERVRQKVLEKGLATESDLAHLSEEEILQFIFLPGFSTAETVTSVSGRGVGMDVVR 449 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 I+++GG VE++S+ G GTTIRI +PLTLAI+ + V + + F +P ++E ++ Sbjct: 450 TAIERIGGTVELRSQWGQGTTIRIKIPLTLAIISALVVSSSGQSFAIPQLGIVELVRLSV 509 Query: 540 ADLHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLV 596 DL + +R+ +R LP++ L + + +V++Q G ++ L+V Sbjct: 510 DDLIRIEKIHDQRIFRLRDRLLPLLRLSDALKLPSLPPDNEGDMSIVVVQVGDEQFGLIV 569 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 D++ ++VVK L S + + TILGDG V +I+DV+ A Sbjct: 570 DEVFDTQEIVVKPLGSILKDLRVYQGTTILGDGRVIMILDVAGTAA 615 Score = 53.3 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 48/119 (40%), Gaps = 11/119 (9%) Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 E +PL V + + + G + V++ RG+ LP++ + + Sbjct: 653 QETMAVPLGLVARLEEFSLKQIEQV-GEQLVVQYRGDLLPLIPIR---GNSRDVQRLDPQ 708 Query: 581 IVVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 VV+ R L+V+++ + + ++ PG+ T++G G I+D+ Sbjct: 709 PVVVFSDNSRMMGLMVNKIEDIIEETITIRMQGKR----PGVFGTTVVG-GKATEIIDI 762 >UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Tax=Desulfuromonadales RepID=B3E3M0_GEOLS Length = 701 Score = 566 bits (1459), Expect = e-159, Method: Composition-based stats. Identities = 218/688 (31%), Positives = 353/688 (51%), Gaps = 56/688 (8%) Query: 7 DFYQTFFDEADELLADMEQHLLVL----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D + F EA+E++ ++ L L + A + + LNAIFR AHS+KG AG FGF ++ Sbjct: 10 DAARDFLAEAEEIVEELGTQLADLADMAEKGAWEPDLLNAIFRGAHSLKGLAGMFGFGMI 69 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 ET H ENLLD R G++ L ++ L + +++ L A D A Sbjct: 70 AETAHHAENLLDWLRMGKISLTPAVLELLFSSAELLTTLLRACVDGT-LDQHQAAASAHA 128 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE------ 176 A E +A L + S+ R+ + K + ++ Sbjct: 129 SAIAACLNPAEPVTAAPLLEQLGLSDSLMGALTEYEEHRLKENCSKGRHIYVVHASFELT 188 Query: 177 -----------------EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL------- 212 E + L ++ + ++ + D E +++A+L Sbjct: 189 TFDQGLAELTDILKGCGEVISTLPSVGERIETHIDFDLLTGTDRNEQELSALLKHLDVSI 248 Query: 213 -------------CFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN 259 AD + + + PV+ A+E E + + Sbjct: 249 LLAGAPKGDAKAAALPDRADFQPVAVTASASETADTPVVLPASELPGASPDE--AFSAKS 306 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG----DLITSMGQLQRNAR 315 S ++RV + K+D+L+N+VGELV+ S ++ ++ + DL + L+R Sbjct: 307 MSRTVRVDIGKLDELMNIVGELVLAHSSISSIANRMRTEGFSRMAIDLGKAAKGLERRLT 366 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 DLQ+ VM IRM+P+ ++ + R+VR ++ + GK++EL L G+ TELDK ++E I DPL Sbjct: 367 DLQKGVMDIRMIPVGQLYEKMSRIVRKISREQGKKIELKLYGAETELDKLIVEDIADPLM 426 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 H++RN++DHGIE PE+RLAAGK+ G + LS+ +G ++ IEV DDGAG++ E++ KA Sbjct: 427 HIIRNAIDHGIESPERRLAAGKDERGTVRLSSFQKGNHVVIEVEDDGAGIDLEKVKQKAL 486 Query: 436 SQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 S+GL MSD E LIF PGFSTA+ +TD+SGRGVGMDVV+ NI + G V+I+++ Sbjct: 487 SKGLVQDINGMSDREALDLIFMPGFSTADTITDISGRGVGMDVVRNNIAAVSGMVDIETR 546 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G G+ I+LP+TLAI+ + + A + +P+ +V+ESL AD+ + G E V+ + Sbjct: 547 LGQGSRFTIILPITLAIIKALIIFCAGRTYAIPITSVVESLILEPADIKTVEGKE-VINL 605 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 R + LP++ L ++F V + VV++ S +R ++VD L+GQ +V+K L + Sbjct: 606 REQTLPLLRLERLFRVERVGINPGEQYVVVVGSAEKRLGIVVDDLLGQQDIVIKPLGPAF 665 Query: 615 RKVPGISAATILGDGSVALIVDVSALQA 642 R + GIS A LGD L++D + A Sbjct: 666 RTLRGISGAADLGDQRTILVLDAGGIIA 693 >UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira interrogans RepID=Q8F3H8_LEPIN Length = 713 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 212/712 (29%), Positives = 360/712 (50%), Gaps = 71/712 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S+ TF E++ELL+ ME +LL+L+ ++ + E ++++FRA H+IKG +G FG+ + Sbjct: 1 MDLSEVRDTFISESEELLSSMESNLLILEKDSKNNEGIHSVFRAIHTIKGTSGMFGYEPI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 ++ TH +E+ LD R + L + I D ++ L ++ D+ + Sbjct: 61 EKFTHEVESFLDRIRSNKQSLTKEGIEFLFLACDHIRNLLQGVGETLIVDSQTSRNQVNL 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS---------------------PRR 161 L +T + +V S S P Sbjct: 121 LSLAKKLTLDDTSNPQKDEVLVQNQSTSSNLLDSHSSSTFWQITLIPNIHLFESGLDPST 180 Query: 162 IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIEAD 219 I ++G+V + + ++ L ++I + F+ E Sbjct: 181 FIKYLSQSGKVKHIFVYPESIPNWSEFNPEHSHLGFEISYESPSKGEEIYSTFQFLKEGS 240 Query: 220 Q-------------------------------------ITFETVEVSPKISTPPVLKLAA 242 E ++S VL Sbjct: 241 YLKILSPGCSLNLFMENCNDFPLGKKAYLNALEIQKVLTPEEIQKLSYTSENLNVLSTTQ 300 Query: 243 EQAPTGRVEREKTTRSN--ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + T +E +K + S ++ ++RV K+D LI LVGEL+ ++ L+++ S+ + + Sbjct: 301 TEQTTTSIENQKESDSIKIQTKTLRVDSSKIDTLIALVGELITQEANLSRKISDSENL-- 358 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 LI S L R +++E +S+RM+P+ +F +Y R+VRDL+ +L KQVEL ++G T Sbjct: 359 -QLIESSESLYRLVTEIREFALSLRMIPISDLFEKYKRVVRDLSKELNKQVELEIIGGET 417 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELD+S+IE+I DP+ H++RN+LDHGIE E+R+ GK++ G L + A H G+I IE+ D Sbjct: 418 ELDRSVIEKISDPIVHILRNALDHGIETSEERIKKGKHATGQLKIQASHGTGSILIEIKD 477 Query: 421 DGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG GL+ ++IL KA S+GL +N+S+ E+ LIF PGFSTA+QVT++SGRGVGMDVV Sbjct: 478 DGKGLDCDKILEKAISKGLITRDQNLSESEIYSLIFQPGFSTADQVTNLSGRGVGMDVVL 537 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 RNI+ + G V+IQ+ + G++ +I LPLTLAI+DG V+ + FI+P+ V E++ E Sbjct: 538 RNIESLRGTVQIQTLKDQGSSFQIRLPLTLAIIDGFLVKASSLYFIVPMQMVRETV---E 594 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + + + +RGE LP++ L + + E +++L+ + + ++V+ L Sbjct: 595 SKVILNGSSSGTMNLRGELLPVLHLSEFLCLESTYFEKEN--ILVLEYEDKSFGIIVNDL 652 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 G+ Q V++ + ++ + S +ILG G +A I+DV L R+Q + Sbjct: 653 HGEVQSVIRPMAEIFKNIKCFSGTSILGSGEIAFILDVPGLYNSIRDQELNK 704 >UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED86_9LACO Length = 681 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 208/688 (30%), Positives = 363/688 (52%), Gaps = 50/688 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D S + FF+E+D+ L + +L L+ E + + +N+IFR AH++KG + T G+ Sbjct: 1 MADDNSVYRDLFFEESDDNLQTLNDSILELEQEPDNIDLINSIFRVAHTLKGMSATMGYD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 V+ + TH ME++ D + G+M++NTD I+L + D +QE +D + +E + + + Sbjct: 61 VMTKLTHKMEDMFDLFKTGKMKINTDHISLVFKCLDKLQELVDDLRDDKELEESQITDLW 120 Query: 121 QALRQL-------------ALEAKGETPSAV-------TRLSVVAKSEPQDEQSRSQSPR 160 L ++ +E E + VV ++ + + + R Sbjct: 121 NELDRVESSAGAGEAEAPAPVEEHDEGALSTKFERYDDADTDVVNDAKAGGMNAYTIAIR 180 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD---------SLSAILPGDIAEDDITAV 211 + LK V L+ E L + AD I + DD+ + Sbjct: 181 LDKDTMLKGPRVFLITEHLEKDGEIIRTEPSADLLEDGDFDTDFRMIYLTKDSVDDVKNI 240 Query: 212 LCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVER--------------EKTTR 257 + E D E + K E+ T + Sbjct: 241 IESNTEIDSYIVEEFKEPAAEEEKAEEKTETEEKKTEEKPAEEKKPAEKKPAAKTQAPAH 300 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 ++ +IRV + ++D+ +NLV E+V+ ++ L ++ + G++ S+ Q+ R +L Sbjct: 301 KAKNQAIRVDLTRLDRFLNLVSEIVVYRNQLEDATNR---ESIGEIRDSLEQVSRLTSEL 357 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q+ V+ IRM + VFSR+PR+VRDL+ +L K+++L ++G TELDK+++ + +PL HL Sbjct: 358 QDLVLKIRMQQVSVVFSRFPRMVRDLSNQLNKEMKLEIIGEETELDKTVVSELSEPLIHL 417 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RNS DHGIE PE R GK VG + L+A +G + I ++DDG GL + I A A + Sbjct: 418 LRNSADHGIEDPETRKKLGKPEVGTITLAAYQEGNKVLITLSDDGKGLKPDVIKASAEKK 477 Query: 438 GLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 G+ + M+D E+ ML+F PGFSTA+++T++SGRGVG+D V+ I ++GG +E+ SK Sbjct: 478 GIDTT-GMTDRELQMLVFHPGFSTAKKITNISGRGVGLDAVQAKIAELGGSIEMDSKVDV 536 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GTT I LPLTL+I+ + V++ E F +PL+ V + RE D+ + + V + + Sbjct: 537 GTTFIIKLPLTLSIIQALMVQIGKESFAIPLDVVERVVMVREKDIMQTSN-QEVCKFQEG 595 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +PI+ K+ V + ++ + +I++ G + Y +LVD+++GQ ++V+K ++ +K+ Sbjct: 596 LIPIIRTDKLLQVPSSSSD--KKYAIIVKIGKQYYGVLVDKMVGQQEIVIKKIDPMLQKI 653 Query: 618 PGISAATILGDGSVALIVDVSALQAINR 645 ATILG+GS+ALI+DV+A+ + Sbjct: 654 KKYQGATILGNGSIALILDVNAICNSRQ 681 >UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCW7_GLUDA Length = 751 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 239/727 (32%), Positives = 373/727 (51%), Gaps = 86/727 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+ D Q FF E DE L ++E+ L L E +NA+FRA HSIKGGA +FG Sbjct: 7 MNGDMDDILQIFFQECDEQLQELERGLSALSDGESGHETINAVFRAVHSIKGGAASFGLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTD-----------IINLFLETKDIM----------Q 99 L H+ E+ LD R + + + +L E +D Q Sbjct: 67 NLVRFAHVFESSLDGLRSDRISPTPEIIKTFLKAMDVLSDLVAEARDGASVDHGRVAESQ 126 Query: 100 EQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSP 159 +L+ + D I + ++ P ++V + + + + Sbjct: 127 AELETLINGDGAPKKTEDVIPADFVPVPMDFVP-VPVDFEPVAVDFSFDEEPAPAAPAAS 185 Query: 160 RRIILSRLKAGEVDLLEEELGHL-------------------------TTLTDVVKGADS 194 ++ R + ++ L D S Sbjct: 186 HLVVTFRPHDAMYERGDDARNILIGLADAASAYGGVGTVTCDVSALPAFASLDPEISYLS 245 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQIT-FETVEVSPKISTPPVLKLAAEQAPTGRVERE 253 +LP ++ E+ + AV +V + +T + P + A + G E E Sbjct: 246 WRVVLPSEVTEESVRAVFDWVGDVCDLTVSRGDDQEPDQDEAALPAPDAVASDAGVPEAE 305 Query: 254 KTT----------------------------------RSNESTSIRVAVEKVDQLINLVG 279 R E SIRV + ++D L++LVG Sbjct: 306 DAAVLLPASSPPQDTPVHVAPAPEAPPATGGGGGAPVRRPEQASIRVDLHRIDDLMDLVG 365 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 ELVI Q+ + S D +L+ S+ +Q RD+Q++VM++R P+ VF R R+ Sbjct: 366 ELVIAQAAIESLSRRDDSSAMRELVESVTSMQSLTRDIQDAVMAVRAQPVRSVFQRMQRV 425 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VR+ K V LTL G TE+D++L+E++ DPLTH++RN++DHGIE E RLAAGK++ Sbjct: 426 VREACSMTDKDVVLTLEGEDTEVDRTLVEKLTDPLTHMLRNAVDHGIEKTEDRLAAGKSA 485 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPG 458 G+++LSA H+ G I I + DDG G+NRER+LA A S+G+ + ++DDE+ L+FAPG Sbjct: 486 TGHVLLSAAHRSGRILITIRDDGGGINRERVLATAISRGIVAPDAVLTDDEINNLLFAPG 545 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FSTA +V+D+SGRGVGMDVVK+ I +GG + I S +G GTT + LPLTLA+LDGM V Sbjct: 546 FSTAAKVSDLSGRGVGMDVVKQAILSLGGRITISSVRGEGTTFCLSLPLTLAVLDGMLVS 605 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA--GAKTE 576 D ++P+++V+E++ D++ L GG V+ +RG +P+V L K ++ G+ Sbjct: 606 AGDSTMVIPVSSVVETMMIDHQDVYTLPGGGNVISIRGSCMPLVPLGKELGLSSAGSDER 665 Query: 577 ATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIV 635 + + +++++++ G R AL+VD++ Q QVV+K++E NYR++PG+SAATILGDGSV+LI+ Sbjct: 666 SDEAVILVVENESGARAALIVDKIHDQTQVVIKSMEKNYRQIPGVSAATILGDGSVSLIL 725 Query: 636 DVSALQA 642 DV L A Sbjct: 726 DVPGLIA 732 >UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=10 Tax=Betaproteobacteria RepID=Q47I37_DECAR Length = 639 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 219/646 (33%), Positives = 325/646 (50%), Gaps = 39/646 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F EA +LL+D++ L+ L+ D LN IFR H++KGGAG + L Sbjct: 7 MEDLLQDFLQEAHDLLSDVDNKLVDLEKMPDDRGLLNDIFRGFHTVKGGAGFLNATELVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 HL ENL D R GE++L +++++ + ++E Q +P AA I Sbjct: 67 LCHLTENLFDRLRNGELELTPELMDVIMAATKGVREMFGELGQMVQPQAADPSVIA---- 122 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L GE +A V +EP E S GE D L H Sbjct: 123 ALQGALTGEVHAAAPVAEPVPLAEPPQETVSSA-----------PGEPDW---NLLHSAV 168 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 A I + A +A + + + + + +P Sbjct: 169 TGQAPAAAPQGELITKAEAA----SAEIAVMPATAVPSTDVAQPAPASPFGRRATDKPGG 224 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR-----SSELDPVN 299 P E+ R N +IRV ++DQ++NL GE+ +T++ L + + D Sbjct: 225 QPANARRVEERAREN---TIRVDTSRLDQVLNLSGEIGLTKNRLTSLRADILAGKNDSET 281 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L ++ QL DLQ SVM RM P+ +F +YPR+ RDLA +LGK VEL L G Sbjct: 282 LHALDQAVSQLDLLVSDLQNSVMKTRMQPIGRLFQKYPRIARDLARQLGKDVELVLAGEE 341 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TE+DK++IE + DPL HL+RN++DHG+E+P +R AGK + L A +G +I + + Sbjct: 342 TEVDKTMIEDLADPLIHLIRNAVDHGVEMPSERQMAGKPVKSLVRLEARQEGDHIVLIIA 401 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ ERI AKA +GL E + + + LIF PGFST Q++DVSGRGVGMD Sbjct: 402 DDGKGMSAERIRAKAIEKGLVSEEEANTLDERQSLNLIFLPGFSTKAQISDVSGRGVGMD 461 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK NIQK+ G +EI+S+ G G+ I LPLTLAIL + V + ++ F LPL+ V E L Sbjct: 462 VVKTNIQKLNGSIEIRSEPGKGSVFIISLPLTLAILPVLLVLLGEQPFALPLSMVREILP 521 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 ++ + + GG+ L VRGE LP++ L ++ V +Q+ R + L V Sbjct: 522 IEQSRIQEV-GGKETLVVRGEVLPVITLARLLGWPQKNYPE---YGVFMQTAERSFILGV 577 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 D G+ V+K+LE + G++ T L +G + LI+D+ L + Sbjct: 578 DSFAGRDDAVIKSLEDF--RPKGVAGVTTLSNGQIVLILDMKELLS 621 >UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVV5_ACIC1 Length = 870 Score = 562 bits (1448), Expect = e-158, Method: Composition-based stats. Identities = 210/690 (30%), Positives = 327/690 (47%), Gaps = 43/690 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E L +++ L+ L+ E + L +IFR H+IKG +G F+ L+ Sbjct: 4 FEEIVREFLVESYENLDQLDRDLVALEQEPGSRDLLQSIFRTIHTIKGTSGFLAFNKLEA 63 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH E LL + R G ++ + + LE D ++ L A + + + + L Sbjct: 64 LTHAGEGLLAKLRDGGLEFTRERADGLLELVDAVRTILAAIETTGTEGDGDYTALTAKLS 123 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI---------------------- 162 L + + A + P R Sbjct: 124 ALQELPAEDAAGKTQSAAHPAHAADSVITDSPADPGRSEAAAAAPAGAETPTPAATPPAD 183 Query: 163 ILSRLKAGEVDLLEE---------ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLC 213 + + AG D E L + L +L A DD + Sbjct: 184 VPAPAGAGNPDQPPEATPAKARGRRPPKLPAVKPEEPRVPLLGEVLKEQAAVDDADLAVA 243 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 + + T E+ + ++ A A + T + TS+RV V +D Sbjct: 244 RLEQELGDTRPIGEILVEHGQVTSEQVRAALAAQAEAKASTTPHTVAETSLRVDVTLLDT 303 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L+ LVGELV+T++ + ++ + + + +L +LQE VM RM P++ VF Sbjct: 304 LMRLVGELVLTRNQIVATAATQ---SDSVIARAAQRLNLLVTELQEGVMKTRMQPIDTVF 360 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 S+ PR+VRDL GKQV L + G TELDK+++E I DPL H VRN++DHGIE PE R Sbjct: 361 SKLPRVVRDLGLACGKQVRLEIEGRDTELDKTILEAIKDPLVHAVRNAIDHGIEAPEVRR 420 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVA 451 GK + G L+L A H+GG + IE+TDDGAG++ +R+ +A G MS E+ Sbjct: 421 ERGKPTEGRLVLRAYHEGGQVNIEITDDGAGIDPQRVAERAIQAGFDAEHVRRMSQRELI 480 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 LIF PG STAE VT+VSGRGVGMDVV+ N++++GG V++ S+ G GTT+RI +PLTLAI Sbjct: 481 NLIFVPGLSTAETVTNVSGRGVGMDVVRANVERIGGTVDVTSELGVGTTLRIKIPLTLAI 540 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHP---LAGGERVLEVRGEYLPIVELWKVF 568 + ++V E + +P + E + V +RG +P+V L + Sbjct: 541 IPALTVECRGERYAIPQVNLDELVSLEGDQASRGVEFLSDAPVFRLRGNLIPLVWLDHIL 600 Query: 569 NVAGAKTEATQGI----VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 + +V+LQ+ GRR+ L+VD+++ ++VVK L +++ + AT Sbjct: 601 GLGRPPRPGDPLPEIVSIVVLQAEGRRFGLVVDRILNTEEIVVKPLSRKLKEIGAYAGAT 660 Query: 625 ILGDGSVALIVDVSALQAINREQRMANTAA 654 I+GDG V LI+DV AL + A+ A Sbjct: 661 IMGDGRVCLILDVRALARRAHVVQDADHHA 690 Score = 68.3 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + V V +PL+ V + A + + G V++ RG YLP+ L + + Sbjct: 709 LVVAVGHRRIGIPLSMVTRLEEIDAAQIEHV-GRRPVVQYRGHYLPLARLSDLLGEPAS- 766 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIG 601 + + VV+ G R L+VD +I Sbjct: 767 -DGERLTVVVYTQGRRSVGLVVDTVID 792 >UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPQ3_9BACT Length = 785 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 221/653 (33%), Positives = 351/653 (53%), Gaps = 48/653 (7%) Query: 1 MSMDISDFYQ-----TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 MS DI+D Q F E+ E L +Q LL ++ D + LN +FR H+IKG AG Sbjct: 1 MSGDINDDLQAELIKDFLLESSEGLETFDQDLLEIEKGDSDPQLLNQVFRVVHTIKGTAG 60 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 GF+ ++ H EN+L R GE++ DI + L+ D ++ LD + Sbjct: 61 CLGFNRIESIAHTGENVLSMMRDGELESTPDIADALLKLSDALRAILDVIESCG------ 114 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 + E+ GE + L V K EP + +++ Sbjct: 115 -----------SDESAGEYNDLRSLLDSVKKGEPLGSADVDELALDPMVNH--------H 155 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 +E G D ++L+A + + ++ A A+ ++ Sbjct: 156 QEVDGSWGLFEDDEPTVEALAAEISEPVVAEEAAAGWGLFDVAE------ASGEASVAKE 209 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 + E+ P + EK + + ++RV V+ +D L+N+VGELV++++ L Q S + Sbjct: 210 NLDTKPKEKTPEISRKLEKVSGA----TVRVDVDLLDTLMNMVGELVLSRNQLLQVSQQR 265 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 + ++ + + + +LQ+ VM RM + V+ +YPR+VRDLA LGKQV L Sbjct: 266 -VITPAEISSLSQRFNQVTTELQQGVMKTRMQAIGSVWGKYPRIVRDLASDLGKQVSLET 324 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G+ TELD+++IE I DPLTH++RN++DHGIE PE+R AA K +V L++ A H+GG + Sbjct: 325 FGADTELDRTIIEAIKDPLTHIIRNAVDHGIESPEERAAADKPAVAQLLMRAFHEGGQVN 384 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 IE+ DDGAG+N ER+ KA +GL E +++ E+ LIF PGFSTAE++++VSGRG Sbjct: 385 IEIVDDGAGINGERVCRKAIDKGLISDEEATRLTEREMINLIFLPGFSTAEKLSNVSGRG 444 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVVK NI+K+GG V+IQS G GT++RI +PLTLAI+ + V+ A + F +P +++ Sbjct: 445 VGMDVVKTNIEKIGGSVDIQSSIGRGTSLRIKIPLTLAIVPALVVKSAAQRFAIPQVSLV 504 Query: 533 ESLQPREADLHPLAGG---ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-VVILQSG 588 E ++ V +RGE LP+V L + ++ K EA I +V+L++ Sbjct: 505 ELVRLEGDQAVEAVEQVYDSPVFRLRGELLPLVFLDRALKISKPKAEAPTTISIVVLRAD 564 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 + + L+VD++ ++VVK L + +P + ATI+GDGSVA+I+D + Sbjct: 565 RQIFGLVVDEVSDTEEIVVKPLGHQLKGLPLYAGATIMGDGSVAIILDAVGVA 617 Score = 50.2 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 6/127 (4%) Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 +PL A + + + GE VL RG + +V L E Sbjct: 656 GWNRLAVPLEAAERLEEFDLSAIERSGSGESVL-YRGGIMRLVRLADHIGSGAVDIEPQV 714 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV-PGISAATILGDGSVALIVDVS 638 V++ + GGR L+V G ++ ++ PG+ + ++ G + I+DV Sbjct: 715 VQVIVYECGGRYVGLVV---GGIRDIIEESASIQGSGTRPGLLGSAVMQ-GEITDIIDVP 770 Query: 639 ALQAINR 645 ++ Sbjct: 771 SVLKSAG 777 >UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=Q8PX97_METMA Length = 671 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 198/675 (29%), Positives = 349/675 (51%), Gaps = 42/675 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + +M LL L+ +AEQ+N +FR+AH+ KG A T GF + Sbjct: 1 MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY--------------KQS 108 E TH ME+L+D +R G++ L++ +I++ E D ++ ++ + Sbjct: 61 VELTHEMESLIDRSRTGKLTLDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSE 120 Query: 109 QEPDAASFDYICQALRQLALEA----------------KGETPSAVTRLSVVAKSEPQDE 152 + I + LR + + KG + E +E Sbjct: 121 GSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKGIEEKGKRQEVKEKTGEKTEE 180 Query: 153 QSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL 212 ++ + K + E + + + + + G+ E+ Sbjct: 181 KAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK 240 Query: 213 CFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVER---EKTTRSNESTSIRVAVE 269 E + E K + + + + E T+S + S RV+ E Sbjct: 241 TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTE 300 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 K+D+L+NLVGELVI +S + + + +L DL ++ Q+ R+LQE V+ IRM+P+ Sbjct: 301 KLDKLMNLVGELVINRSRVKELTGKLKS---KDLDFALSDYQKLTRELQEEVLEIRMIPL 357 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 +++ + +PR++RDLA K+++ + G ++D+++IE I DPL HL+RN++DHGIE P Sbjct: 358 DHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGDPLVHLLRNAVDHGIETP 417 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMS 446 EKR+ GK G +I++A Q + I + DDG G++ E I A + L +E +S Sbjct: 418 EKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLS 477 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 + E+ LIF PG STA +VTD+SGRGVGMD+VK I+ +GG +++ SK GTG+ + LP Sbjct: 478 ERELIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLP 537 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 +T+A+ M V+V E + +P +++S+ R+ D+ + E V+ + + LP++ L K Sbjct: 538 ITIALCQSMLVKVGMERYAIPFTNIIKSISVRKKDVRHIR-SEEVILINEKTLPLLRLRK 596 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL-ESNYRKVPGISAATI 625 +F + + E +VI++ G+ L+VD L+G+ ++++K K G + AT+ Sbjct: 597 LFQLPAIENE-ENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFKSRLLEKTRGFAGATV 655 Query: 626 LGDGSVALIVDVSAL 640 +GDGSV LI+D++++ Sbjct: 656 MGDGSVILILDINSI 670 >UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 Tax=Alphaproteobacteria RepID=Q07IM6_RHOP5 Length = 947 Score = 560 bits (1444), Expect = e-158, Method: Composition-based stats. Identities = 217/657 (33%), Positives = 341/657 (51%), Gaps = 17/657 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D + F E +E L ++ L+ + E +A+ L+ IFR H+IKG G G L+ Sbjct: 12 MDDLLREFLTETNESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEA 71 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYI--CQ 121 H E L+ + R G M + ++L L T D ++E L + ++ EP+ D I + Sbjct: 72 LAHAAETLMGKFRDG-MPVTGGAVSLILATIDRIKEILGQLEATEAEPEGVDQDLIGQLE 130 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 L + + E + V ++ P S ++ +++ L+ GEV L E E Sbjct: 131 ILSEGGGAVEAEAEAVVEAPVAEVEAAPVAPASETEVLPQVLERALRPGEVSLDELERAF 190 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 T T+ + SL P AE ++ + + E + + Sbjct: 191 QETETEPEMASPSL---APEADAEPVRLEIVKAEAKPEAAKPEAKMSKAEAAKAAAKAAM 247 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 + P G E + SIRV V+ ++ L+ +V ELV+T++ L + S + Sbjct: 248 KPKKPAGDAETVLEGDKIANQSIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHEDT--- 304 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 + + +L +LQ+ VM RM P+ + + PR+VRDLAG+LGKQ+EL + G+ TE Sbjct: 305 EFKVPLQRLSTVTAELQDGVMKTRMQPIGNAWQKLPRIVRDLAGELGKQIELEMHGADTE 364 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+ +++ I DPLTH+VRNS DHG+E +R GK G + LSA H+GG+I I + D+ Sbjct: 365 LDRQVLDLIKDPLTHMVRNSADHGLETTVERAELGKPEQGTIRLSAYHEGGHIVICIADN 424 Query: 422 GAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 G GLN E+I AKA + GL E MS+ ++ IFAPGFSTA VT VSGRGVGMDVV Sbjct: 425 GRGLNTEKIKAKAVANGLASEADVEKMSESQIHKFIFAPGFSTAAAVTSVSGRGVGMDVV 484 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 + NI ++GG ++I+S G GT++ I +PLTLAI+ + V A F +P AV+E ++ Sbjct: 485 RTNIDQIGGTIDIKSVAGEGTSVTIKIPLTLAIVSALIVEAAGNRFAIPQLAVVELVRAH 544 Query: 539 EADLHPLAG--GERVLEVRGEYLPIVELWKVF--NVAGAKTEATQGIVVILQSGGRRYAL 594 H + VL +R + LP++ L K+ + A+ E G +V+ Q G + + + Sbjct: 545 ANSEHKIERIKETPVLRLRNKLLPLMHLRKLLKIDNGSAEAEPENGFIVVTQVGNQTFGI 604 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 +VD + ++VVK + + R + S TILGDG+V +IVD + + Q A Sbjct: 605 VVDGVFHTEEIVVKPMSTKLRHIEMFSGNTILGDGAVIMIVDPNGIAQALGTQVAAQ 661 Score = 44.8 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 7/91 (7%) Query: 512 LDGMSVRVA-DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 + R + +PL+ V + + ++ G +++ R + +P+V + V Sbjct: 680 TSLLVFRAGTAQPKAVPLSLVTRLEEIAADKIE-ISNGRYMVQYREQLMPLVTMEGV--- 735 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + +++ R L+VD+++ Sbjct: 736 --TVATSGAQPILVFADEDRAMGLVVDEIVD 764 >UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW-like adaptor domain) n=5 Tax=Lactobacillales RepID=A8U609_9LACT Length = 687 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 209/680 (30%), Positives = 341/680 (50%), Gaps = 53/680 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + FF+E DE L + + +L L+ D+ ++ +FR+AH+IKG A T G+ + + Sbjct: 5 SKYLDLFFEETDEHLQSLNEQVLELENNPEDSSIVDVMFRSAHTIKGMAATMGYDTMAKL 64 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH MEN+ D ++ + + I L + D + + ++ ++ + + + Q L Sbjct: 65 THKMENVFDLLKQKIIPADATSIALIFDCLDTLSDLVEDLREENDAER-DITNLVQRLDH 123 Query: 126 LALEAKG------------------------------ETPSAVTRLSVVAKSEPQDEQSR 155 ++ E + V +E S Sbjct: 124 VSSGESALVEAVTVEQETGSLLNLSLEKVEDSDLMIIEAAKEDGYNAYVLAIRIDEESSM 183 Query: 156 SQSPRRIILSRLK---------AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAE- 205 + +++S+L+ G L ++ G + L V K + L D +E Sbjct: 184 KNARVYLVMSKLEQHGDVLYSEPGTEALENDDFGTIFKLIYVSKLDEETVLNLALDNSEI 243 Query: 206 -DDITAVLCFVIEADQITFETVEVSPKI----STPPVLKLAAEQAPTGRVEREKTTRSNE 260 + + + + E + P+ V + A QA + K Sbjct: 244 AEVLIQTIQQADDLLVQQAEKSQTEPQEKLVEEQEIVELVEATQATAKAPGKAKAQNHAM 303 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + SIRV + K+D +NLV ELVI ++ L S D + ++ + + R + +LQE Sbjct: 304 NQSIRVDIGKLDSFMNLVSELVIYRTRLEDLS---DQLLVSEMKEPLEHVARISSELQEL 360 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 V+ IRM P+ V +R+PR++RDL LGK+ L + G TELD++++ + +PL HL+RN Sbjct: 361 VLKIRMQPVSTVMTRFPRMIRDLGNDLGKEFNLVIEGEDTELDRTVVSELSEPLVHLLRN 420 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 S DHG+E+PE+RL GKN G + ++A +G + + +TDDG G+N I A A +G Sbjct: 421 SADHGVEMPEERLRLGKNPKGLIKITAYQEGNRVVLTLTDDGKGVNPVVIKASAERKG-I 479 Query: 441 VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 +E MSD E+ LIF PGFSTA++VT +SGRGVGMD VK+ I ++GG VE++S G GT Sbjct: 480 STEGMSDKEIQQLIFHPGFSTAQEVTSISGRGVGMDAVKQKITELGGTVELESIVGKGTV 539 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 +I LPLTL+I+ + V+V F +PL + ++ +E D+ + E V + G +P Sbjct: 540 FKINLPLTLSIIQSLLVKVGQATFAIPLGIIKTIVKVKEEDIIRVHNRE-VYKYEGLAVP 598 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 +V L K +V A TE + +V+++ G AL VD L+ Q ++V+K L + Sbjct: 599 VVRLHKALDV--AVTEESNLHLVLVKQGDNYNALAVDDLVRQQEIVIKKLGQELNMLKNY 656 Query: 621 SAATILGDGSVALIVDVSAL 640 ATILGDGS+ LI+D SA+ Sbjct: 657 LGATILGDGSIVLILDASAI 676 >UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Tax=Desulfuromonadales RepID=Q39QJ5_GEOMG Length = 607 Score = 558 bits (1438), Expect = e-157, Method: Composition-based stats. Identities = 216/650 (33%), Positives = 336/650 (51%), Gaps = 65/650 (10%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+++ + F E ELL ++ L+ L+ DAE +N IFR+ H++KG + G Sbjct: 1 MAIECEDQELLDGFLTETAELLEKLDDDLVALEKTPSDAELMNGIFRSIHTVKGASSFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F +L + TH E++L+ RR Sbjct: 61 FELLVKVTHKTEDVLNRMRR---------------------------------------- 80 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 GE + V+ ++ + S I+ R G V L Sbjct: 81 -------------GELEVTPEVMDVILEAVDLVKLLVSDIKGGDIVEREIDGTVGKLLPF 127 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L V+K S + + P AE T + + P Sbjct: 128 LSENAKEATVLK--PSATTVTPSAPAEAAPTPQATETETHPSAELSPAPEAAPVKAPEPA 185 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 P + +K ++T++RV V+++D L+N VGELV+ ++ + Q +++ + Sbjct: 186 PRVQAPPPPAPRDDKKGDDLADNTTVRVDVKRLDDLMNQVGELVLERNRMMQLNTDFNDG 245 Query: 299 NHGDLITSMGQLQR----NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 G+L + +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L Sbjct: 246 GDDTFGEEFGKLSKRISFVTSELQMQVLKMRMIPVEKVFKKFPRIVRNLARDLGKEVDLL 305 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELD+S+++ I DPL HL+RN++DHG+E P++R+AAGK G LILSA H+G I Sbjct: 306 VFGEETELDRSVVDEIGDPLIHLIRNAMDHGLETPDERMAAGKPRKGTLILSAAHEGNQI 365 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGR 471 I + DDG G++ ERI KA +GL E M E+ LIF PGFST E+ TD+SGR Sbjct: 366 VISIKDDGKGIDPERIARKAKEKGLVTDEQLAAMGQREILDLIFLPGFSTKEKATDLSGR 425 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVV+ NI+K+ G ++I+S+ G G+ + LPLTLAI+ + V V DE + +PL AV Sbjct: 426 GVGMDVVRTNIKKLNGIIDIRSELGQGSEFILKLPLTLAIIQSLLVEVEDETYSIPLAAV 485 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 +E+L+ E + H + GG+ VL++R LP++ L K+FNVA ++ VV++ +R Sbjct: 486 LETLRVEEREFHTI-GGQEVLKLRDSVLPLMRLQKIFNVAPSERSRVACYVVVVGVAEKR 544 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 L+V +L+GQ +V +K+L +PGI+ +TILGDG V LI+D + L Sbjct: 545 VGLVVSRLLGQQEVAIKSLGKYLANLPGIAGSTILGDGRVTLIIDPAGLM 594 >UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BIY1_TERTT Length = 701 Score = 557 bits (1437), Expect = e-157, Method: Composition-based stats. Identities = 226/692 (32%), Positives = 357/692 (51%), Gaps = 62/692 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + TF +EA E L E+ LL L+ +A ++ FR+ H+IKG G G+ L Sbjct: 1 MFAVIATFQNEAREHLQLFEESLLELEDNPHNAGCIDQAFRSIHTIKGAGGIVGYRELCN 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +EN++D+ R GE +++++I+ FL+ KD +Q L + + + + Sbjct: 61 FAHHVENVMDKIRSGEYDISSELISFFLDAKDHIQAMLPNPEPESHLIIEGQQLLEKLYK 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL-- 182 L EA + S + V + E + S +V L ELG L Sbjct: 121 VLPDEADQNSVSTPFESATVEQEEKPATKVFRIRFTPDADSFKNGFDVRPLLRELGGLGH 180 Query: 183 ------------TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 A L + + + V FVI+ + E ++++ Sbjct: 181 CQVTTITHDLPDFNALQPQHSAMRWDLTLLTEQPQSSVDDVFIFVIDDWTLEIEEIDLTD 240 Query: 231 K-----------------------------------------ISTPPVLKLAAEQAPTGR 249 K + + AEQ T Sbjct: 241 KDAISDKLGELLIARGIISQNQLSDALAENREVGKILQDQGLVKDDDIKAALAEQQVTRE 300 Query: 250 VEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ 309 +++ S+ T++RV +++D+L+NLVGELVI Q+ L Q +++ + ++ Sbjct: 301 TKKQTGNDSSAETTVRVPADRLDKLMNLVGELVIVQARLNQVATKRED---EGVLAISED 357 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 L R +L+++ S+RM+P+ F RY RLVRD++ L K++ L G+ TELDK +I++ Sbjct: 358 LDRLTTELRDNTFSLRMLPIGSTFGRYRRLVRDVSRDLNKKIVLHTEGAETELDKMMIDK 417 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 + DPL HL+RNS+DHGIE P R AAGKN+ G ++L A+H + IEV DDG GL+ Sbjct: 418 LADPLVHLIRNSIDHGIEPPADREAAGKNTTGTILLRAQHSDSQVKIEVHDDGRGLDTGI 477 Query: 430 ILAKAASQGLTVSENMSDDE-VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 I AKA +GL ++ D+E + LIF PGFSTA+ V+++SGRGVGMDVVKR+IQ +GG Sbjct: 478 IFAKAVEKGLVAADAHLDNESIFKLIFEPGFSTAKTVSEISGRGVGMDVVKRSIQDLGGK 537 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548 + +QS+ G GT RI LPLT AI++G+ V+V++E ++LPL+ V E ++ + + Sbjct: 538 LAVQSELGEGTHFRISLPLTTAIIEGLMVQVSNERYVLPLSVVEECVEIKSSATKT-NDR 596 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 R+ +VR + +P + L + F ++G + Q +VI++ G R+ VD++IGQ+Q V+K Sbjct: 597 RRLAKVRDQRIPYMRLREWFRLSGIIPDIEQ--IVIVRLGEERFGFCVDEVIGQYQTVIK 654 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSAL 640 L Y G S ATILGDGSVA+I+D +L Sbjct: 655 RLGKMYENTVGYSGATILGDGSVAIILDPLSL 686 >UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=CHEA_LISMO Length = 618 Score = 555 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 189/643 (29%), Positives = 357/643 (55%), Gaps = 30/643 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ ++ F +EA E L + +LL L+ + + + ++ IFR+AH+ KG + T GF Sbjct: 1 MTTNM---LDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSAHTFKGMSATMGFQ 57 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH MEN+LDE R + + ++++ ++ + + + AA Sbjct: 58 QVADLTHAMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDIQHGGQG-AADISKTV 116 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L L + ET V + +A Q E++ R ++ + E+ ++ E Sbjct: 117 ADLEALLHPEQ-ETDLTVEKTYRIAI---QIEEAAILKAVRAVMCLERLAEMGIISETTP 172 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + ++ + S +L +D+I AV+ + E +++T ++ P Sbjct: 173 DREAI-ELEEFEQSFEVVLESAQTKDEIKAVILDISEIEKVTVTEEVEEVQVIEPI---- 227 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + ++TT+ E+ +IRV +EK+++L+N+ E VI ++ + + + + N+ Sbjct: 228 --------KKAAKQTTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIA---EKTNN 276 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 +L+ +G+ ++++Q ++++RM+P++ VF+R+P++VR LA +LGK+++L + G+ T Sbjct: 277 KELMEHLGRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGADT 336 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK +I+ I DPL HL+RNS+DHG E E R GKN + L A H G N+ IE+ D Sbjct: 337 EVDKIVIDEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVIEIAD 396 Query: 421 DGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DGAG+N+ ++L KA ++ + M+D E+ L+F GFSTA+QV+D+SGRGVG+DV Sbjct: 397 DGAGINKRKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGRGVGLDV 456 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ I K+GG + ++S + G+T RI +PLTL+I+ M V ++ + +PL V E++ Sbjct: 457 VRNTILKIGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLANVAEAITI 516 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 AD+ + G+ ++ R + +++L + F+ + + +++++++ R + L++ Sbjct: 517 NPADIQHVH-GKDLINYRETIIEVLDLGECFH-ETPLNDTDELLLLVVKNAKRTFGLIIK 574 Query: 598 QLIGQHQVVVKNLESNYRKVP-GISAATILGDGSVALIVDVSA 639 +IGQ ++V+K L + + S ATILGDG V LI+++ Sbjct: 575 DIIGQREIVLKTLGGFFSESQIAFSGATILGDGRVVLILNLET 617 >UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW65_METML Length = 769 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 280/532 (52%), Positives = 367/532 (68%), Gaps = 11/532 (2%) Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL---KAGEVDLLEEELGHL 182 ++L+ TPSA T++ + + S +S ++++ E + E++ Sbjct: 232 ISLKTNTATPSAATQIEEIKPIVAEAVVSNVESSTKVLIHEEVGYGLFEDEGQEKQEEGY 291 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 D++ + L GD ++ + AD + E V + Sbjct: 292 GFFAPFQPHPDAVKSELIGDDTALTLSNSGMTKLAADAVKTEIVATK--------VPAQD 343 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E+ GR E +K S E++SIRV VEKVDQLINLVGELVITQ+M+ QR S LDPV + Sbjct: 344 ERKNLGRRESDKAPASAEASSIRVGVEKVDQLINLVGELVITQAMIEQRISMLDPVQNEA 403 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 LI S+GQL RN RDLQESVMSIRMMPM++VFSR+PR+VRDLA KL K+V+ VG++TEL Sbjct: 404 LINSVGQLTRNTRDLQESVMSIRMMPMDFVFSRFPRMVRDLAAKLNKKVDFVTVGATTEL 463 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK LIERI+DPLTHLVRNS+DHGIE+PE R GK+ G L LSA H+GG+I IEVTDDG Sbjct: 464 DKGLIERIVDPLTHLVRNSVDHGIEIPENRRKTGKSETGTLTLSAAHKGGSIVIEVTDDG 523 Query: 423 AGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 AGLNR++ILAKA S GL VSE+M+D EV LIFAPGFSTAE VTDVSGRGVGMDVVKRNI Sbjct: 524 AGLNRDKILAKAHSNGLAVSESMTDGEVFSLIFAPGFSTAEVVTDVSGRGVGMDVVKRNI 583 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 MGG V+I+S G GTTI I LPLTLAILDGMSV + + ++++PLN ++E+LQPR D+ Sbjct: 584 TSMGGTVDIRSALGFGTTISISLPLTLAILDGMSVSLGESIYVIPLNLIVETLQPRAEDI 643 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + G R++ VRGEYLPI+ L +FN A T+ T+G++V+L+S G++ AL VD+L+GQ Sbjct: 644 KTVTGEGRMVHVRGEYLPIIALHSLFNHATDITDPTEGVLVLLESDGKKSALFVDRLVGQ 703 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 QVV+K+LE+N++KV G+S ATI+GDGSVALI+DV+AL + + AA Sbjct: 704 QQVVIKSLETNFKKVLGVSGATIMGDGSVALILDVAALIQMGQNTNYITGAA 755 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 88/275 (32%), Positives = 140/275 (50%), Gaps = 16/275 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FY+ FFDEA+ELLA+ E+ LL + + PD E+LNAIFRAAHSIKGGA TFGF Sbjct: 1 MTIDMSQFYEVFFDEAEELLAEAERLLLGINIDDPDNEELNAIFRAAHSIKGGAATFGFM 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L ++ ++ FL KD+++ +LD ++ + + D + Sbjct: 61 DMTEITHVLENLLDKIRKHEMALTSEHVDAFLAAKDVLKMELDGHRLATDVDQDQVADVK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ---------SRSQSPRRIILSRLKAGE 171 L+QL+ P+ + V P Q S I++ + + Sbjct: 121 MMLKQLSEADAASAPAPAPTPAPVVAEAPPVFQPVEVASALPPDGMSCFNIVMPDITEKD 180 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 + L+EELG L + + L D +E DI ++ F+++ D + Sbjct: 181 AENLKEELGLLGDVAVSKQADGHYVITLTTDSSEADIISICSFIVDPDDLVI-------S 233 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRV 266 + T AA Q + + SN +S +V Sbjct: 234 LKTNTATPSAATQIEEIKPIVAEAVVSNVESSTKV 268 >UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acetobutylicum RepID=Q97MS3_CLOAB Length = 649 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 200/641 (31%), Positives = 350/641 (54%), Gaps = 15/641 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEA-PDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +T+ E ++ D+E +L + E E +N IFR H++KG + F+ + E Sbjct: 8 DSMLETYMIETSGMVDDLENIILQNEEEKCYTDEVINKIFRIVHTVKGSSAMMSFNGIAE 67 Query: 65 TTHLMENLLDEARRGEMQL--NTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 +H +E++ R + Q ++I +L L+ D ++++LD K +E + + I Sbjct: 68 LSHSLEDIFYFIREEKSQSVRCSNISDLILDNVDFIKKELDKIKNKEEANGDPSELIANN 127 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 + K E + V + + E R+ + + + + ++ E + Sbjct: 128 KKFFDSLKKQEFYKGI----VFFQKDCGMENIRAYTAVETL--KTISNDICYFPENILED 181 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + +K + L D + ++I V ++ + + + +S K Sbjct: 182 DDTCNTIKES-GFKVFLKSDKSREEINKVFEAIVLLENFKISEITENEYVSITEKDKNRD 240 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + E+++ S+ + I V V KVD+L++L+GELVIT++M+ Q + +L + + Sbjct: 241 INKIPVKEEKKENITSSAPSVINVNVNKVDKLMDLLGELVITEAMVIQ-NPDLRGLEITN 299 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + QL + ++LQ++VM IRM+P+ VF++ R+VRD++ KL K VEL L+G TE+ Sbjct: 300 FSKAATQLHKVIKELQDTVMDIRMVPLANVFAKMKRIVRDMSKKLDKDVELKLIGEETEV 359 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK++IE I DPL HLVRNS+DHGIE E+R GK G ++L A++ G ++ I + DDG Sbjct: 360 DKNIIEHIADPLMHLVRNSIDHGIEDREQRKRCGKTEKGLVVLEAKNLGSDVVIRIKDDG 419 Query: 423 AGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL++ +IL KA +GL E +SD++ LI PGFST +VT+ SGRGVGMDVV RN Sbjct: 420 GGLDKNKILQKAKEKGLIGENEIVSDEKTCSLILEPGFSTNNEVTEFSGRGVGMDVVSRN 479 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I MGG + + S +G GTTI + +PLTLAI+DG++V+V + +P + E +P + Sbjct: 480 IGDMGGRINVSSSEGKGTTIILKIPLTLAIIDGINVKVGKSYYTIPTLDIKEFFKPDSSK 539 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + G ++ +RG P++ + + +N+ + + GI+++++ + + D+++G Sbjct: 540 ILSNMDGSEMITIRGRCYPVIRIHETYNLKTSVKNISDGILIMVEKNNKMTCIFADEIVG 599 Query: 602 QHQVVVKNLESNYR---KVPGISAATILGDGSVALIVDVSA 639 Q QVV+K+L + V G+S T+LGDG+++LI+DV Sbjct: 600 QQQVVIKSLPEYIKNNNNVKGLSGCTLLGDGNISLILDVGE 640 >UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVX2_DESOH Length = 694 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 220/698 (31%), Positives = 343/698 (49%), Gaps = 68/698 (9%) Query: 6 SDFYQTFFDEADE-LLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 S Q F +EA E LL ++E LL L D E +N FRA H++KG FGF + E Sbjct: 5 SRVRQAFIEEAREELLPELESALLELGHAPEDMELINRAFRALHTLKGSGAMFGFDRISE 64 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E + D R G ++ ++ L L KD Q +D A + + Sbjct: 65 LAHELETIFDNVRNGSFAVDNRLVELTLAAKDRFQMLVDDPGLDGPEVVADLLVAFRQIT 124 Query: 125 Q------LALEAKGETPSAVTRLSVVA----KSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 A E P +S + + +P+ + + +L L Sbjct: 125 AETMTGEDAAAGGPEAPEGTPDISAWSLYHIRFKPRPGIFATGTNPLFLLDELHEMGAAR 184 Query: 175 LEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQ------------ 220 + + + L + +L D ++ I V FV + Sbjct: 185 VVAHVESVPVLDAMDPECCYTWWDILLATDQGQNAIQDVFIFVEDECDLAIGLLTDVLQP 244 Query: 221 --------ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT---------------- 256 + I + ++ + + G E + + Sbjct: 245 GREAPVFDRLAPVLLKDASIDIEGLRRMVSAEVVAGDRETDSASTAVKTGPGAVPSAEAG 304 Query: 257 ------RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 + +S+RV K+DQL+NLVGELVI Q+ L++ + + ++ + Sbjct: 305 VSAPAAPAKTISSMRVQARKLDQLVNLVGELVIAQTRLSRLVDQHEDAALSEIAEV---I 361 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 +R + DL+++ + IRM+P+ F ++ R+V D + + GK+V+L G++TELDK++IER+ Sbjct: 362 ERLSNDLRDTTLDIRMLPIGSSFGKFKRVVWDFSAQKGKEVDLVTEGAATELDKTVIERL 421 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPL HL+RNS+DHGIE PE+R AGK G ++ SAEH GGN+ I + DDG G++ E + Sbjct: 422 DDPLVHLLRNSIDHGIETPEERERAGKPRHGRIVFSAEHAGGNVIITIADDGRGIDPEAV 481 Query: 431 LAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 AKA +GL S S+ EV IF PGFSTA Q++D+SGRGVGMDVV++NI + G V Sbjct: 482 RAKAVERGLLASGAAPSEKEVLNFIFEPGFSTAGQISDMSGRGVGMDVVRQNITALRGKV 541 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 + S +G GTT+R+ +PLTLAI+DG+ +R+ E FI+PL V E L+ E Sbjct: 542 SVSSIKGQGTTVRMTIPLTLAIIDGLEIRIDREHFIVPLAVVSECLEHHR-------RRE 594 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 + +R + +P + L + F + G+ + Q VV+ R L+VD++IG Q V+KN Sbjct: 595 GFISLRDQLVPFLRLREWFGIEGSPPQHEQ--VVVASLEKRMVGLVVDEIIGLQQAVIKN 652 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 L Y+++ G+S ATI GDG +ALI+DV L +Q Sbjct: 653 LGRAYKEIQGVSGATIQGDGGIALILDVEPLIQKAEQQ 690 >UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RX9_SULDN Length = 691 Score = 555 bits (1430), Expect = e-156, Method: Composition-based stats. Identities = 215/678 (31%), Positives = 354/678 (52%), Gaps = 44/678 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 Q F +E E+L ++ LL L+ D +N IFR H++KG A +FGF L E Sbjct: 5 DRVMQIFLNECKEILEEIAPKLLNLEDTPNDKNLINDIFRGIHTLKGNANSFGFVKLGEF 64 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H E+LL R+ E L++ ++LF+ + DI+ + + + ++ I + +++ Sbjct: 65 VHHFEDLLSIYRKDESVLDSSEVDLFIRSFDIVGSVFEYEEDGVDGYPTNYYEILEEIKK 124 Query: 126 L------ALEAKGETPSA-----VTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG---- 170 + E+ E SA V + SV+ K + Q + + +K Sbjct: 125 ALNIKENSKESFEEIVSASSFAHVAQESVIVKKMVEHTQYNLKDIGDKKIYEIKLELDSD 184 Query: 171 -----------------------EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDD 207 +++E + L SL L D E D Sbjct: 185 IYLRGYNHQIFFRLLESLGTLLYSNYIIDENIPTLEEFNTEHSYVKSLYIYLLSDSDEMD 244 Query: 208 ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV---EREKTTRSNESTSI 264 I V F+ + +++ V++ + E + K +S +SI Sbjct: 245 ILDVFEFIAQEHEVSLSVVDLKELETLQEKESKEEESQSQETLYVQNGSKEHKSVAKSSI 304 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV K+D+L + +GELVI QS ++Q + ++ +N +L + L ++ R +Q VMS+ Sbjct: 305 RVESAKLDELFDSIGELVIAQSYISQ-NEKIRSINDNELNQYLEMLSKSTRIIQSKVMSL 363 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ F + R+VRD++ K K++EL L G TE+DK++++++ +PL HL+RNS+DH Sbjct: 364 RMIPIRDTFLKMKRVVRDVSVKTSKEIELILSGEDTEIDKTMVDKLSEPLIHLLRNSVDH 423 Query: 385 GI-ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT-VS 442 GI E R+A GK GN+ LSA H+G + IE+ DDG G++ ++IL KA +G Sbjct: 424 GIEESAHDRVALGKEECGNIYLSAAHKGSSFVIEIRDDGRGIDTQKILQKAIEKGFAKEG 483 Query: 443 ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 + + DE+ +F GFSTA +TD+SGRGVG+D V+++I+++ G V ++S+ G GT R Sbjct: 484 ASYTQDEIINFLFCAGFSTANSITDISGRGVGLDAVRQSIEELRGKVTVESELGVGTIFR 543 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I+LPLTLAI+DG+++RV +E+ I+P +V+ES P D+H + G + RGE LPIV Sbjct: 544 IILPLTLAIIDGLTIRVDNEMLIVPTLSVVESFSPIIKDIHYVKGEGEFINYRGEILPIV 603 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L ++ + +KTE + + RY + VD+L+G+ QVV+K+L V IS Sbjct: 604 RLNRLLGLNKSKTEFENSTFICIDHERGRYIIQVDELLGRQQVVIKSLGVLSNNVKEISG 663 Query: 623 ATILGDGSVALIVDVSAL 640 A ILG G +ALI++ + Sbjct: 664 AAILGTGQIALILNTEGV 681 >UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 Tax=Bacteria RepID=Q1IRH4_ACIBL Length = 766 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 213/648 (32%), Positives = 341/648 (52%), Gaps = 68/648 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS ++ + + F E++E L +++ L+ L+ + + + L +IFRA H++KG +G GF Sbjct: 15 MS-EMDEIVKEFLVESNEGLDQLDRDLVALEKDPEEKDLLASIFRAIHTVKGTSGVLGFP 73 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 ++ H+ E+LL R G+M+L+ I + L D+++E L Sbjct: 74 KIESVAHVGESLLSRLRDGKMRLDPQITSGLLAMGDVLRELLGN---------------- 117 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L +E VTRLS Sbjct: 118 --IDALGVEGDRNVEPVVTRLSA------------------------------------- 138 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 L TD K AD+ +A + + V +A E SP ++ Sbjct: 139 -LLERTDSSKAADAATADTAPEARKKTTKRVAKKRSKAAVEPLSVAEASPAPASTLAADE 197 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 AA+ + + + IRV V +D+++NLVGELV+ ++ + Q + Sbjct: 198 AAQSGANLETSEARGPAVSANN-IRVDVGLLDKMMNLVGELVLARNQILQYTG---SQQD 253 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 +++ +L +LQESVM RM P+ ++++ PRLVRDLA GKQV + + G+ T Sbjct: 254 SGFVSAAQRLNLITTELQESVMKTRMQPIGNIWNKLPRLVRDLALSCGKQVRVEMDGAET 313 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDK++IE I DPLTH+VRN++DHG+E+PE+R + GK + G L+L A H+GG + IE++D Sbjct: 314 ELDKTIIEAIKDPLTHIVRNAVDHGLEMPEERRSTGKEAEGRLLLRAYHEGGQVNIEISD 373 Query: 421 DGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ E + KA +GL +E MS+ E+ ++F PGFSTA+QVT++SGRGVGMDV Sbjct: 374 DGKGVDLEAVREKARQRGLVSAEQAARMSERELLNVLFLPGFSTAKQVTNISGRGVGMDV 433 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK NI+K+GG V++QS +G GT ++I +PLTLAI+ + E F +P +++E ++ Sbjct: 434 VKTNIEKIGGTVDLQSVEGKGTALKIKIPLTLAIIPALIATSGGERFAIPQVSLLELVRL 493 Query: 538 READL---HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + G V +RG LP+V L V + K + +V+LQ+ R + L Sbjct: 494 EGDGVGKGIEYIHGAPVYRLRGSLLPLVSLNGVLGLDR-KKQQEIANIVVLQADDRTFGL 552 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 +VD++ ++VVK L + + + + ATI+GDG+VALI+DV L Sbjct: 553 IVDEINDTEEIVVKPLSNLLKGLLCFAGATIMGDGTVALILDVMGLAQ 600 Score = 65.2 bits (158), Expect = 9e-09, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 64/132 (48%), Gaps = 12/132 (9%) Query: 515 MSVRVADE-VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 + RV +E +PL+ V + + + + +GG V++ RG+ +P+V L ++ N+ G Sbjct: 631 LLTRVGEEGRIAVPLSNVNRLEEFKLSSVEH-SGGLEVVQYRGQIMPLVRLSQLLNLPGT 689 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIG--QHQVVV-KNLESNYRKVPGISAATILGDGS 630 V++ GR L+VD++ + Q+ V ++ + Y + + +L Sbjct: 690 DA-GEVLPVIVTSQQGRSLGLVVDKIEDVTEQQIAVNRSNDRMY-----LQGSAVLQQ-R 742 Query: 631 VALIVDVSALQA 642 V ++DV A+ A Sbjct: 743 VTDLLDVHAVMA 754 >UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax=cellular organisms RepID=Q21G15_SACD2 Length = 806 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 226/500 (45%), Positives = 328/500 (65%), Gaps = 10/500 (2%) Query: 154 SRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLC 213 S++ + + + L + T ++ A A D ++ I+A++ Sbjct: 287 SKADTKGLPDFADFEPESCYLGWDIKLEANTEVTEIETAFEWVA----DESQLTISALVA 342 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAA-EQAPTGRVEREKTT--RSNESTSIRVAVEK 270 E Q E V + TP + ++ EQ + + K S ++T IRV ++K Sbjct: 343 APREDGQTEAEAVNSNEAKLTPILAPVSVVEQKEPVKASKAKPANKASTDATFIRVGIDK 402 Query: 271 VDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPME 330 +D LIN+VGELVITQSML Q S ++D L+ + QL++N R+LQE VM IRM+P+ Sbjct: 403 IDNLINMVGELVITQSMLGQLSEDVDVAKVPRLVEGLNQLEQNTRELQEGVMRIRMLPIS 462 Query: 331 YVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPE 390 + F+R+PRLVRDL+ +L KQVEL + G +TELDK+++E+I DPL HLVRN++DHGIELP Sbjct: 463 FSFNRFPRLVRDLSQRLEKQVELVIHGENTELDKTVMEKIGDPLVHLVRNAVDHGIELPA 522 Query: 391 KRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSD 447 RLAAGK VG + L A H+GGNI IE+ DDGAGLNR+++L KA + + + + M+D Sbjct: 523 ARLAAGKPEVGTITLDAYHKGGNIVIEIKDDGAGLNRDKVLQKAIDKKIISASDAAMMTD 582 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 ++V LIF PGFSTA VTDVSGRGVGMDVVKRNIQ + G V+I SK G G+TI I LPL Sbjct: 583 EQVYDLIFQPGFSTAAAVTDVSGRGVGMDVVKRNIQALNGAVDIASKLGEGSTITIRLPL 642 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAILDG +RV ++I PL +++ES+Q R ++ LAGG++V +R EY+PI+EL K Sbjct: 643 TLAILDGQLIRVGGNIYIFPLISIVESMQCRSEYVNQLAGGQQVFRLRDEYVPIIELSKT 702 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 F++ ++V+++ G++ ++VD+L+GQ QVV+K+LE NY++V G+S ATILG Sbjct: 703 FSIPSDTDSIEGALMVVVEFDGQKVGVIVDELLGQQQVVIKSLEQNYKQVEGVSGATILG 762 Query: 628 DGSVALIVDVSALQAINREQ 647 DG+VALI+DV ++ + ++ Sbjct: 763 DGTVALILDVQSIVDLFSQK 782 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 13/229 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F+Q FF+E+ E L ME L+ L P D E +NAIFR AHSIKGG+ TF F+ Sbjct: 1 MSIDLSQFHQVFFEESVEGLDIMESALMELDPTDVDDETINAIFRCAHSIKGGSATFSFN 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLD+ R G+ L +NL LE+ D ++E L A QS E + Sbjct: 61 AICDFTHVLETLLDQVRSGQRSLVLTHVNLLLESVDCLREML-ALAQSGELEKTEQAATL 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDE-----------QSRSQSPRRIILSRLKA 169 Q + L +G P+ T + S+ P RI+ Sbjct: 120 QRQFEAILANEGPAPAQKTEAAPTVNSDADAPWLITFQPSLEIMQTGNDPARILRELRNT 179 Query: 170 GEVDLLEE-ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE 217 G + L+ + D + S A +P I ++ + V +V + Sbjct: 180 GALQLVANSDALPEWGGFDPEQCYLSWRASVPASIEKNALEEVFEWVTD 228 >UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1M2_9PLAN Length = 921 Score = 553 bits (1425), Expect = e-155, Method: Composition-based stats. Identities = 213/657 (32%), Positives = 329/657 (50%), Gaps = 49/657 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ F EA E LAD+E LL ++ ++P+ E ++ +FR HS+KG AG G Sbjct: 1 MNDADQQIVNDFVIEASEHLADIENQLLSIEASADSPNVELVHEVFRNVHSVKGVAGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F+ + H +E++L+ R GE++ +I L D +++ + + + D Sbjct: 61 FASVGSLAHSLESVLNMVRGGELRPQGVVIETLLSGFDTLRQMVHHIDRVDDFDVTGHVN 120 Query: 119 ICQALRQLA--LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 Q + +A + GE +A T A P +DL + Sbjct: 121 QLQEIMNVAKIAPSAGELAAAGTSGGSAASQHP----------------------LDLAQ 158 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 + + D SL + A A + P ++ Sbjct: 159 QFVTDSGLQADPNAILASLREQMEPAAAPK---------ANAQSSQQPKIASEPAPTSDA 209 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 + A E + S +IRV V +D+L+NL GELV+ ++ L Q Sbjct: 210 AINSKISAANGAAAESTPSKGSAADANIRVPVAILDRLMNLAGELVLGRNQLLQILQNKS 269 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 L T +L + +LQE++M+ RM + VF+R+PR+VRD++ KLGKQ L L Sbjct: 270 GAG---LDTVGARLDQVTTELQEAIMNARMQQVGTVFNRFPRMVRDVSQKLGKQCRLQLE 326 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 GS ELDK+++E I DPLTHL+RN++DHGIE PE R GK+ G L + A HQ G + I Sbjct: 327 GSEVELDKTILENICDPLTHLIRNAIDHGIERPEVRAREGKSEAGTLTIRAFHQAGKVHI 386 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 V+DDG G++ + + K +G +E ++SD E LIF PGFSTAE VT+VSGRGV Sbjct: 387 TVSDDGGGIHPQNLRDKGVRKGWFSAEHAASLSDREALRLIFRPGFSTAEVVTEVSGRGV 446 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK NI+K+GG VE+ S G GTT+ + LPLTLAI+ + V E + +P ++++E Sbjct: 447 GMDVVKTNIEKLGGTVEVDSTPGAGTTVHVKLPLTLAIIPSLIVGSCGERYAIPESSIIE 506 Query: 534 SLQPREAD---LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-----VVIL 585 ++ D G L +RG LP+V L + + + KT ++++ Sbjct: 507 LVRFTPGDKSMRVERFQGAEALRLRGTLLPLVRLSSLLSTSSKKTPIATDTSRAHNIIVV 566 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 + G RY ++VD ++ Q+VVK L + + ++ AT+LGDG VA I+D+ + A Sbjct: 567 EGGVVRYGIVVDAVLDPEQIVVKPLGRHIKSCRCLAGATVLGDGQVAFILDIPGIAA 623 Score = 42.9 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 6/122 (4%) Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 ++F P+ V + + + +L+ RG LP+V+L + Sbjct: 660 GDLFAAPMAMVSRIEKIGREQVDRVE-SRLLLQYRGGTLPLVQLE---PGTQREELPESV 715 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V++ Q G L+V ++ +++ + G ++ +G V ++DV L Sbjct: 716 YVLVFQVKGYEMGLIVPLIVDICDAS-TAVDTRVYREKGTMGVLVI-EGRVVRLLDVHEL 773 Query: 641 QA 642 A Sbjct: 774 AA 775 >UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=C7I593_THIIN Length = 746 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 243/752 (32%), Positives = 371/752 (49%), Gaps = 110/752 (14%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAP---------DAEQLNAIFRAAHS 49 MS + + ++F EA ELL ME+ L+ L+P+ D E +NA+FRAAH+ Sbjct: 1 MSFEQQMQQAMRSFIVEAQELLEGMERGLMELEPQGSADDVNDEALDGEHINALFRAAHT 60 Query: 50 IKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDII-------NLFLETKDIM---- 98 IKG AG FG + TH +E++LD+ R G++ ++++++ + + D + Sbjct: 61 IKGSAGLFGLDGIVRFTHHLESVLDQMRAGKLAVSSELVALLLQGRDHLAQLIDQIDSQG 120 Query: 99 ---------QEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEP 149 Q + + +Q+P + Q+ + P V Sbjct: 121 ACIADTPEEQALVVRLQAAQQPAGGALVVAHQSPIARGPASAEAAPVTVVAHGSALTPSW 180 Query: 150 -------QDEQSRSQSPRRIILSRLKAGEV-------------DLLEEELGHLTTLTDVV 189 D P I GE+ D ++ E +L + Sbjct: 181 HLSLRFGADSLRNGMDPLAFIRYLRGLGEIVGLVTLTDALPPLDAMDAETSYLGFEINFK 240 Query: 190 KGA--------------DSLSAILP-----------------------------GDIAED 206 A DS ILP G + + Sbjct: 241 SEASKEEIAAVFEFVQEDSTIRILPAHSRIADYVQLIRSLPEDDLRLGDILVQIGTLTQK 300 Query: 207 DITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRV 266 +++ L +A + + QA + ++ K RS ++ +RV Sbjct: 301 ELSDALSAQHDAQATGAPAAPLGEILVREGATHQPIVQAALDKQKQIKDKRSRDNQMLRV 360 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 A +K+D LINLVGELVI + A + + + Q+ R D++E + +RM Sbjct: 361 AADKLDALINLVGELVIASAGNALHAQNASQI------EAAAQITRLVEDIRERALKLRM 414 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 + + F+R+ R+VRD++ +LGK + L + G+ TE+DK+L+ERI DPL HLVRNS+DHGI Sbjct: 415 VEIGETFARFQRVVRDVSRELGKDIALVIEGADTEMDKTLVERIADPLMHLVRNSIDHGI 474 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-- 444 E PE R A GK + G L L+A H G+I I V+DDG GLNRERILAKA +GL +E Sbjct: 475 ESPEVRTARGKPAQGTLKLAARHDSGSILITVSDDGGGLNRERILAKAVERGLISTEAAA 534 Query: 445 -MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 + D EV LIF PGFSTA+ VTD+SGRGVGMDVVKRNI+ + G ++IQS G GT + + Sbjct: 535 ALPDAEVWALIFEPGFSTADAVTDLSGRGVGMDVVKRNIEAIRGSIDIQSSAGVGTQMHL 594 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLAI+DG V+ A F+LPL+AV+E ++ A + + +RGE LP++ Sbjct: 595 RLPLTLAIIDGFLVQAAGRTFVLPLDAVIECMEFAPAQPQ-----QGYINLRGEVLPLLH 649 Query: 564 LWKVFNVAGAKTEA--TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L + + + ++ T+ VV+ Q GG+R ++VD L+G++Q V+K L + + + GIS Sbjct: 650 LREQLGLTDSAADSPNTRSNVVVAQIGGQRAGIVVDALLGEYQTVIKPLGALFAHLQGIS 709 Query: 622 AATILGDGSVALIVDVSALQAINREQRMANTA 653 +TILG+G VALI+D + L + A Sbjct: 710 GSTILGNGEVALILDAAPLISRASRSAQGRQA 741 >UniRef50_C2BUM1 Sensor histidine kinase CheA n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUM1_9ACTO Length = 840 Score = 552 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 201/668 (30%), Positives = 347/668 (51%), Gaps = 21/668 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + + F E+ E L +EQ ++ L+ E E L++IFR H+IKG +G F+ L+ Sbjct: 3 EMDEIVREFLVESYENLDQLEQDMVSLESEPGSKELLSSIFRTIHTIKGTSGFLAFNRLE 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 + H ENLL E R G +++ + ++ L D ++ + + +++ + + + + Sbjct: 63 KLAHRGENLLSELRDGVREMDQETADVLLLMVDRIRNIMGSVEETGQEGDVDIESVIAQI 122 Query: 124 RQLALE-AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 + + + P+A A +E + + + + L E+L Sbjct: 123 EAIQGKTSSAPLPAADGMAGEPAPAEAAAPAADAPVEVPFLTNVADENGNVNLGEDLASA 182 Query: 183 TTLTDVVKG---------ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 AD + GD A + + P Sbjct: 183 PAAPAADAPAEVPFLTNVADENGNVNLGDGAAEAAAPAPAETAAPAAQAAPAAKPEPPAP 242 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 P L A + + ++RS +SIRV V+ +D L+ V ELV+ ++ + + + Sbjct: 243 AAPKSSLRAAKKDDAKPAEHGSSRSAADSSIRVDVDLLDVLMREVSELVLVRNQIVRLT- 301 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 D + +L+ S +L A +LQE +M RM P+E+++S+ PR+VRDLA + K V+L Sbjct: 302 --DSMTDMNLVQSSQRLSIVATELQEGIMKTRMQPIEHLWSKMPRVVRDLAKQTEKNVQL 359 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 ++G TELD+SL+E I DPLTH+VRN++DHG+E PE R AAGK+ G + L A H GG Sbjct: 360 VMIGGDTELDRSLLEAIKDPLTHMVRNAVDHGVESPEARKAAGKDPKGTVTLKAYHAGGQ 419 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSG 470 + +++ DDGAG++ + KA +GL + MSD E+ L+F PGFSTA++V+++SG Sbjct: 420 VVVDIIDDGAGIDPVVVANKALDKGLVTQQQLGEMSDKEIFNLLFLPGFSTAKKVSNISG 479 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVG DVVK +++ +GG V+++S+ G G+T R+ +PLTLAI ++V E++ +P + Sbjct: 480 RGVGTDVVKTSVEAIGGTVDVESELGKGSTWRMRIPLTLAIQPSLTVESHGELYAIPQVS 539 Query: 531 VMESLQPREADLHP---LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ--GIVVIL 585 ++E + + V +RG LP++ L V + A ++ G++ +L Sbjct: 540 LLELVVLDSSRKETSMEYVNASPVYRLRGMLLPLIRLSHVLHPEEASDRGSEANGVIAVL 599 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 Q+ +R+ L+VD++I ++VVK L S + + + AT+LGDG VALI+D+ A+ + Sbjct: 600 QNDDQRFGLVVDKVINNEEIVVKPLSSKLKSIGLYAGATLLGDGRVALILDIGAVARKSL 659 Query: 646 EQRMANTA 653 A Sbjct: 660 TGATTQAA 667 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 10/129 (7%) Query: 513 DGMSVRVA-DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 + V + +PL AV + + GG V++ RG+ LPIV L ++ V Sbjct: 687 QALVVGIGDGRRVAIPLAAVTRLEHISVEAVERV-GGREVIQYRGQILPIVRLDRLLGVM 745 Query: 572 GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV--KNLESNYRKVPGISAATILGDG 629 + E VV+ + G R A++V +++ +V K SN G+ + +L D Sbjct: 746 DYE-EPKDLQVVVYRRGERSVAMVVREIL---DIVADDKRKHSNIED-HGLLGSAVLKD- 799 Query: 630 SVALIVDVS 638 V ++DV Sbjct: 800 RVTELLDVE 808 >UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Tax=Alphaproteobacteria RepID=B8IQX9_METNO Length = 878 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 204/646 (31%), Positives = 328/646 (50%), Gaps = 67/646 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D + F E E L ++ L+ + + + L IFR H+IKG G G L+ Sbjct: 1 MDDLLREFLTETGEHLDTVDLELVRFEQDPNNQTILRNIFRLVHTIKGTCGFLGLPRLEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E L+ + R G M + + + L L+T D ++ + +++ A + + + AL Sbjct: 61 LAHAAETLMGKFRDG-MTVTREAVTLILQTLDRIKVIVAELERTAAEPAGADEDLIGALE 119 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +++ +GE P+ S + + + LK GEV L Sbjct: 120 RMS---EGEIPAPAEPSS--------PAVTTGTLVPQTLERALKPGEVSL---------- 158 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + ++ E +P++ P K AA+ Sbjct: 159 -------------------------------DDLERAFREAPGPAPEL-RPEPAKPAAKA 186 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P E ++ +IRV V+ ++ L+ +V ELV+T++ L + + + ++ Sbjct: 187 EPQPEGEGAAISKVQ---TIRVNVDTLEHLMTMVSELVLTRNQLLEIARHHEDNSYK--- 240 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L +LQE VM RM P+ + + PR+VRDL+ +LG++++L + G+ TELD+ Sbjct: 241 VPLQRLSNVTAELQEGVMKTRMQPIGSAWQKLPRVVRDLSSELGRKIDLVMQGAETELDR 300 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++E I DPLTH+VRNS DHGIE +R AAGK G + LSA H+GG I IE+ DDG G Sbjct: 301 QVLEVIKDPLTHMVRNSADHGIESAAERKAAGKPEKGTIRLSAFHEGGTITIEIADDGKG 360 Query: 425 LNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 L+ I KA +G+ E M+D +VA IF PGFSTA+ +T VSGRGVGMDVVK N Sbjct: 361 LDLAAIRRKAVERGIATEAEVERMNDAQVAKFIFHPGFSTAKAITSVSGRGVGMDVVKTN 420 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+ +GG V+I+++ G GTT I +PLTLAI+ + V + F +P +V+E ++ + Sbjct: 421 IELIGGTVDIRTQFGQGTTFTIKIPLTLAIVAALIVSARNHRFAIPQVSVLELVRVQPGS 480 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKT--EATQGIVVILQSGGRRYALLVD 597 H + G VL +R LPIV + + + + +G VV+ Q G +R+ +LVD Sbjct: 481 DHTVERINGSPVLRLRDRLLPIVPIAGLLGLDTDAAAVSSDEGFVVVSQVGRQRFGILVD 540 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 + ++VVK + + R +P S TILGDG+V LI+D + + + Sbjct: 541 GVFHTEEIVVKPMSTKLRHIPLYSGNTILGDGAVVLIIDPNGVARM 586 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 6/92 (6%) Query: 511 ILDGMSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 + + + + +PL+ V + A + + GG +++ RG +P+V + + Sbjct: 610 TVTLLVFKGGGDALKAVPLSLVTRLEEVDAAKVEWV-GGRPLIQYRGRLMPLVPV----D 664 Query: 570 VAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 +V+ G R L VD+++ Sbjct: 665 PDQVLRREGSQALVVFSDGERSMGLAVDEIVD 696 >UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46DT7_METBF Length = 598 Score = 550 bits (1419), Expect = e-155, Method: Composition-based stats. Identities = 182/645 (28%), Positives = 336/645 (52%), Gaps = 53/645 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + ++ LLVL+ + + EQ+N +FRAAH+ KG A T GF + Sbjct: 1 MDMSKYMDIFRVESEKYIKELSDSLLVLENDPENTEQVNTLFRAAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+L+D R + LN+ +I++ L D ++ ++ S+ Sbjct: 61 VELTHEMESLIDGLRTRQTVLNSSLIDVLLICVDTLEGLVENVCGSE------------- 107 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 ++P+ E+ S + +V + + L + Sbjct: 108 -----------------------GNKPEKEKKDSVNKYEYHP------DVYEVLKTLRKV 138 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + + L + ++ + + + EVS T V A Sbjct: 139 NDSPEKASIQKAGDKSLSAEKKSEEGGEESGKIKDNAKKCNRDNEVSKTEETNKVKNAAK 198 Query: 243 E--QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 E + + + + R++ +++D+L+NLVGELVI +S + + + +L Sbjct: 199 EIYLPEKAPAYPKSSPKVKIVQNPRISTKQLDKLMNLVGELVINRSRINELTRDLKS--- 255 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 +L ++ + R+LQE V+ RM+P++++ YPR++RDLA K+++ + G Sbjct: 256 KELEAALSDFHKLTRELQEEVIEARMVPLDHITYIYPRMIRDLARVQNKKIDFIIKGKEI 315 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 +LD++++E I D L HL+RN++DHGIE+PEKR+ K G ++++A Q + I + D Sbjct: 316 KLDRTILEEIGDSLVHLLRNAVDHGIEIPEKRVELRKKENGTVLITASRQENFVLIRIED 375 Query: 421 DGAGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ I A +G+ +E + ++E LIF PG ST++ VTD+SGRG+GMDV Sbjct: 376 DGCGIDTNEIRKVALKKGIISRESAEQLQEEEAMQLIFTPGLSTSDNVTDISGRGIGMDV 435 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK ++++GG V+++SK G G++ + LPLT+A+ M +RV E + +P +++++++ Sbjct: 436 VKNRVERLGGSVKVESKPGLGSSFELKLPLTVAVYQAMLLRVGKEKYAIPFTSIVKNIEV 495 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 ++ + G+ V+ + + LP+ L + F + E VV+++ G+ ++VD Sbjct: 496 SSQEIKHIK-GQEVILIDNKILPLFRLKRQFQLPDDDDE-NNIFVVLVEKHGQYTGIIVD 553 Query: 598 QLIGQHQVVVKNL-ESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +L+G+ +V+VK+ G + ATILGDGS+ LI+DV++L Sbjct: 554 ELLGKQEVIVKSFKSKLLDDTRGFAGATILGDGSIILIIDVNSLI 598 >UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales RepID=C2KYL0_9FIRM Length = 693 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 206/688 (29%), Positives = 347/688 (50%), Gaps = 47/688 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 M + T+ E + LL +++ L+ + + +N IFR H+IKG + F Sbjct: 1 MDSTMEGMLDTYLLETEALLDKLDEMLIADEKVGDFSTDDVNEIFRIMHTIKGSSAMMEF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQL-----NTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 + L H +E++ R + +++ +L ++D ++ L+ K +E D Sbjct: 61 TPLSNIAHHIEDMFFFIRDKGIDSLSGDQKSELFDLMFRSEDFLRSGLEKVKAGEELDN- 119 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + ++ + G+ P+ + A S ++R+ + + Sbjct: 120 NVEEFAGSINAFLAKISGKAPADSAPVVEAADSTKASGENRNLPKDDKAKKFIHVFLDEG 179 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV--------LCFVIEADQI----- 221 + E + + +K D P D+ + TA L F + D Sbjct: 180 IGMENLRAFMIVNAIKEFDLEFRYYPADMDSNPETAQTIIDEGFFLAFDSDEDCEKGEKI 239 Query: 222 --------TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN----------ESTS 263 ++E VE + + V AE + + +E + + Sbjct: 240 LREQSHILSYEPVEATKAEAKAEVKSANAESSSAPKASKEPAAAQQTAQQKAAAPVKQSL 299 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQESV 321 I V ++K+D L +LVGE+VIT+SM+ L + + + S QL++ DLQ+ Sbjct: 300 ISVNLQKLDSLNDLVGEIVITESMVTSSPVLRMLPQESLDNFMKSARQLRKLTDDLQDIA 359 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MS+RM+ + VF + R+VRD+ KLGK V+LT++G TE+DK++++ I DPL H+VRNS Sbjct: 360 MSLRMVSISGVFQKMNRIVRDMKQKLGKDVKLTIIGEDTEVDKTIVDSIQDPLMHIVRNS 419 Query: 382 LDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 +DHGIE E+R+AAGK+S G LILSA H + I V DDG G++ E++L KA +G+ Sbjct: 420 MDHGIEETKEERIAAGKDSQGELILSASHTSSEVIITVQDDGYGMDPEKLLDKAEEKGIL 479 Query: 441 --VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 S E LI PGFST VT+ SGRGVGMDVVK+N++ +GG + I S+ G G Sbjct: 480 YKPRSEYSKKEALGLIMLPGFSTNTAVTEFSGRGVGMDVVKKNLESVGGTISISSEIGKG 539 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 +T + +PLTLAI+DGM V V D +F +P+ + +S + ++++ G +++ + Sbjct: 540 STFTMKIPLTLAIMDGMKVNVGDTIFTIPIVNIRQSFKVDDSEVVFDENGNEMVKRMDVF 599 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR--- 615 PI+ L + + G T+ G+++ +++G + L VD LIG+ QVVVK L + + Sbjct: 600 YPIIRLNNFYGIEGKYTDLQDGVLIWVEAGDKSCCLFVDDLIGEQQVVVKPLPAYFNAYD 659 Query: 616 -KVPGISAATILGDGSVALIVDVSALQA 642 K GI+ +ILGDG++ +I+DV L + Sbjct: 660 LKSSGINGCSILGDGNICIILDVLGLYS 687 >UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Tax=Desulfovibrio RepID=B8J0K8_DESDA Length = 1031 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 194/657 (29%), Positives = 318/657 (48%), Gaps = 51/657 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F + + + L L+ + + ++A++R +IK G G + ++ Sbjct: 401 EAFRVTVQQQIEIIHAALETLKKDGSHKDSIDALYRCLLAIKNACGFMGLADIKTYAERT 460 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 ++D+ R + + +++L + I+Q+ + + Sbjct: 461 AGIVDQGRSSGIDFDL-MVDLLDQEVSIIQDMVRQALNDGKV------------------ 501 Query: 130 AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVV 189 P D S + P A D E + Sbjct: 502 -------------------PTDASSATTKPASDEDVGSAAIIADKPEATPTTTSAPIAPA 542 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 + P D TA + PK + P A A Sbjct: 543 PAQAEVQGAAPADAKTTVPTATAVPASGEQSTEAASRPAQPKPAPPMTQAAPARAAAPQA 602 Query: 250 VEREKTTRSNEST-SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG 308 ++S+ +IRV E++D L+NL+GEL+I ++ + L+ I+ + Sbjct: 603 KGAASAAEGHKSSSTIRVDHERLDHLMNLIGELIINRNRYTLIARSLEDSGDNVDISHVA 662 Query: 309 Q--------LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 Q + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L + G T Sbjct: 663 QSLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVMEGEET 722 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDKS++E I DPL HL+RNS+DHGIE + RLAAGK + G + L A H+G ++ IE+ D Sbjct: 723 ELDKSVVEVIGDPLVHLIRNSVDHGIESEDVRLAAGKPAKGKVTLRAFHKGNSVAIEIED 782 Query: 421 DGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ ++ A +G+ E + D E LIFAPGFS+A+Q+TD+SGRGVGMDV Sbjct: 783 DGKGIDPAKMRETAIRKGVITPEEAAQLDDREAVELIFAPGFSSADQITDISGRGVGMDV 842 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ NI+ + G V S+ G GT + LPLTLAI+D + V V+ +++ +PL+AV E+ + Sbjct: 843 VRTNIKNLKGSVSTYSEVGKGTRFTLSLPLTLAIIDALMVNVSGQMYAIPLDAVSETTKI 902 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 L + G + V +RGE L +VE+ ++ + VV++ RR L+VD Sbjct: 903 EAHRLTDVKGRKAV-TLRGEVLGVVEMAEMLGLPRTDPLPDVLSVVVIHDNDRRLGLVVD 961 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +L+ + ++V+K L + + GIS ATI+GDGSV LI+D + + + ++ A Sbjct: 962 RLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILDPHEIYLMATSKAVSVVPA 1018 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 2/174 (1%) Query: 1 MSMDI--SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPELFADFIAEAKEHLETIEPNLLELEKAPGNLALLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + + H EN+LDE R+G M + +I+++ L + D +++ +D + S + Sbjct: 61 LNRINQLAHKSENILDELRKGSMVVTPEIMDVILASTDALRQMIDNLESSNSEGEVETGH 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 I + + ++ + + S AG++ Sbjct: 121 IMAQIDAIMAGESPVPAQPGQAAPASPVFPAEEVTPAAAAGLSEAESLSAAGDM 174 Score = 94.1 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 2/148 (1%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEA-PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F DE+ E++ ++ LL L+ E +N +FR H++KG +G G+S L T Sbjct: 223 HLKDFIDESIEIIENLTNGLLELEENPTGQGELVNDLFRFFHNMKGNSGIIGYSDLNALT 282 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQALRQ 125 H E LL+ R+G++ ++I+L L D+M+ + S + D + + L+ Sbjct: 283 HEAETLLNNVRQGKITPTHELIDLLLLVVDVMEALVHNIDVASGQASPFETDSVVKQLQN 342 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQ 153 P+ + +++ + + Sbjct: 343 ALAGGPIALPAELLTAQGREQADSGNPE 370 >UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFX8_HAHCH Length = 709 Score = 549 bits (1415), Expect = e-154, Method: Composition-based stats. Identities = 229/715 (32%), Positives = 365/715 (51%), Gaps = 74/715 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D S + F E+ +LLA+MEQ LL L+ E E ++A+FRAAH+IKG G FG Sbjct: 1 MSLDFSGALKAFAQESKDLLAEMEQSLLTLEEEGAKKELVDAVFRAAHTIKGSGGLFGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA----------YKQSQE 110 + TH +E +LD R G + ++ D+I+L L D + +++ ++ Sbjct: 61 HVVAFTHDVEGVLDAVRDGRLDIDGDLISLLLSCGDQIGRLVESSLAGEVEEALLRKGAA 120 Query: 111 PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 A Y+ A+ A E + R ++ +D P I+ G Sbjct: 121 LQAQLQRYLPGAVMVAAQEEDAGEAAYGARGWHISLRCGRDLLRDGMDPLSILHYISTLG 180 Query: 171 EVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVI------------ 216 E+ + GH+ ++ + L L + A+++I FV Sbjct: 181 ELTRVTTFCGHMPAAEEMDPESCYLAFEIDLITEQAKEEIEDAFEFVSASSEVRITPVGD 240 Query: 217 ---------------------------------EADQITFETVEVSPKISTPPVLKLAAE 243 E E PK+ V + A + Sbjct: 241 PDSWDGAIEAAPDEDQRLGEILLDSGAVTRNELEQALKQQERTPERPKLGEILVARHAVQ 300 Query: 244 Q---APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + + + + + ++V +K+D LINL+GEL+I + + R+ + + Sbjct: 301 EKTVSTALEKQASAVKKQRQDSFLKVDAQKLDHLINLIGELMIANAEVRVRA---ERIQE 357 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 L S+ R +++ +S+RM+ + F+R+ R+VRDLA LGK + L + G T Sbjct: 358 SVLHESVANSTRFIEAVRDCALSLRMVQIGDTFNRFQRVVRDLARDLGKDIRLVVSGGDT 417 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 +LDK+L+ERI +PLTHLVRN++DHG+E R GK + G + L+A H+ G+I IEV+D Sbjct: 418 DLDKTLVERISEPLTHLVRNAIDHGVESDALRRERGKAATGVIRLNAFHERGSIVIEVSD 477 Query: 421 DGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG G+N E+I+AKA + L SE MSD ++ LIF PGFSTAEQVT+VSGRGVGMD VK Sbjct: 478 DGGGMNPEKIVAKAIEKQLIRSSEGMSDGDIFKLIFEPGFSTAEQVTNVSGRGVGMDAVK 537 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 + ++++ G VE++S+ G G+TIR+ LPLTLAI++G V V D +++P+ V E ++ Sbjct: 538 KTLEELRGSVEVESELGKGSTIRLRLPLTLAIINGFLVGVGDSKYVVPMEVVDECVELNG 597 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 GG + +RG LP + L ++F++ G + + VV++Q GRR L+VD+L Sbjct: 598 D------GGGDFMGLRGMALPFLRLRELFSIDGRPAD--RQSVVVVQYAGRRAGLVVDRL 649 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +G+ Q V+K L + + +S T+LG G V LI+D+ L + R + N A Sbjct: 650 MGELQTVIKPLGDIFTPLKWVSGCTLLGSGDVGLILDIPEL--VTRAEHAQNQFA 702 >UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 Tax=Deltaproteobacteria RepID=Q1JZU4_DESAC Length = 774 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 213/641 (33%), Positives = 335/641 (52%), Gaps = 67/641 (10%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F EADELL EQ LL + E + + IFR+ HS KG +G FG+ L++ + Sbjct: 196 EMVERFVQEADELLETAEQSLLEWEKEPDSQDHVALIFRSIHSFKGNSGFFGYGTLEKLS 255 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +EN+LD + G + + L + D + L L Sbjct: 256 HQIENVLDVVKSGGSFATENPFEVLLNSVDA---------------------LKDGLNAL 294 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + + + E+D L + L L + Sbjct: 295 TEDGRDDI-----------------------------------DEIDSLIDALKALPSPR 319 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEA--DQITFETVEVSPKISTPPVLKLAAEQ 244 D G + E+ + A L + D I ++ + ++ Sbjct: 320 IGEVLVD------KGVVDEETVNAALNQQKKPLGDVIVDMGKATKEQVDEALTTQTQTKK 373 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + IRV +EK+D LINL+GELVI ++ML + +L+ + Sbjct: 374 PAAPAPRAKPKGSAIKRQDIRVDLEKLDNLINLIGELVIAENMLIH-NPDLEGLELESFN 432 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + Q+ + R+LQE M IRM+P+ +F R RLV DL+ K GK+V+L L G STE+DK Sbjct: 433 KAAQQMGKLVRELQEMAMIIRMIPVSGLFRRMIRLVHDLSVKSGKKVDLKLSGESTEVDK 492 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++IE I DPL H++RNS+DHG+E P++R+AA K+ G + L+A H+ G + I + DDG G Sbjct: 493 TVIETITDPLVHILRNSMDHGLEPPDERIAAEKDETGVIRLNACHEEGEVWITLEDDGRG 552 Query: 425 LNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 LN+E+ILAKA + GL + +++D E+ LIF PGFSTA+++TD+SGRGVGMDVVK+N+ Sbjct: 553 LNKEKILAKAITNGLIEGDGSDLTDKEIYNLIFQPGFSTADKITDISGRGVGMDVVKQNL 612 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +K+ G V++ S G GT I++ +PLTLAI+DGM VRV I+P+ ++ E+ +P+ + Sbjct: 613 EKIKGKVDVDSIPGKGTKIKLRIPLTLAIIDGMLVRVGTARCIVPILSIKEAFRPQPDAI 672 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 E ++ VR + P+V L ++ ++ I+++L+ GR L+VD+++GQ Sbjct: 673 TVTPDNEELVRVRENFFPVVRLHELLETTPEHSDLVDAILIVLEYQGRSICLMVDEIMGQ 732 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 Q V+K L V G S TILG+G V+LI+DV L + Sbjct: 733 QQTVIKGLSEYIGNVRGCSGCTILGNGDVSLILDVGNLVEM 773 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 49/226 (21%), Positives = 97/226 (42%), Gaps = 5/226 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D + Q F E+ +++ +E ++ L + D E +NA+FR HS+KG AG F+ Sbjct: 5 LSSDQIEIIQEFVQESQDMIEQLEPTIIEL-GQTTDNETINAVFRLFHSMKGSAGFLEFN 63 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ--SQEPDAASFDY 118 + H E+LLD R G+M L + + L E D +E L+ + + E A + Sbjct: 64 HITSVAHAAESLLDLVRSGKMSLQPEHVTLLCECCDFTKEALETVDEHFTDEAMAKQGEA 123 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + + A+++ P+ ++ ++ P+ E P+ S +A ++ + Sbjct: 124 MATRFHE-AMDSDSAAPADEEPVTQEPQTVPEPEAQAETVPQPQPESASEADAEEIDPSK 182 Query: 179 LGHLTTLT-DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 + LT ++ ++ E ++L + E D Sbjct: 183 IEATDDLTLEITPEMVERFVQEADELLETAEQSLLEWEKEPDSQDH 228 >UniRef50_B4SHY6 CheA signal transduction histidine kinase n=14 Tax=Xanthomonadaceae RepID=B4SHY6_STRM5 Length = 614 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 225/644 (34%), Positives = 341/644 (52%), Gaps = 35/644 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D F EA E+L + + L+ L+ D +QLNA+FR H++KGGAG G + Sbjct: 1 MSAVSDDITADFIIEAQEILDRLGEQLVSLEQAPQDGDQLNAVFRGYHTLKGGAGFLGVT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E H E L AR G+ L + ++ D +Q LDA EP A + I Sbjct: 61 AMVELCHAAEEALGAARAGQAVLQAHHFDAAQQSLDYLQSMLDAVSSGTEPGYAPPELIA 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 Q V + + + + L E L + G Sbjct: 121 Q-------------------FDVHGGATATPAAAAAPATGGSDLITDDEFEALLDQLHGG 161 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + T K AD G I+ED+ A+L + + V P + P + Sbjct: 162 NAPTAVAPAKKAD------DGLISEDEFEALLDQLHGGAAPGTKPVAAVPAAAATPAPRP 215 Query: 241 AAEQAPTGRVEREKTTRSNEST-SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 AA + E+ ++RV +++D ++NL+GELV++++ L + L Sbjct: 216 AAPAPAAKPPAKPPAKPLAEAEHTVRVDTKRLDAIVNLIGELVLSRNRLKTLRARL---R 272 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 +L ++ L LQ +VM RM P+ VFSR+P++ RD+A L K+V+L L+G+ Sbjct: 273 DEELDRAVSTLDIATARLQSAVMRTRMQPVGKVFSRFPKVARDVARSLKKEVDLELIGAE 332 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELD++L+E + DPL HLVRN++DHG+E PE R A GK +G++ LSA+ +G + IEV Sbjct: 333 TELDRNLVEALADPLVHLVRNAIDHGVETPELREAQGKPRMGHVRLSAQQEGDYVSIEVQ 392 Query: 420 DDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDGAG++ E++ AKA +GL E +S +E L+F PGFST +QVTD+SGRGVGMD Sbjct: 393 DDGAGIDPEKLRAKAREKGLIDPEAAARLSSEECLHLVFLPGFSTKQQVTDISGRGVGMD 452 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV+ I+++ G ++IQS+ G G+ I +PLTLAIL + V+ ++V+ LPL VME L Sbjct: 453 VVQSRIRELSGQIQIQSELGRGSRFLIRVPLTLAILPTLLVQAGEDVYALPLARVMEVLH 512 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 L G VL+ R L +V+L + +V A + +V+LQ+G R+ L+V Sbjct: 513 APRTSLGWF-DGRAVLDRRSHTLALVDLRQWLDVTPAASPL--LTIVVLQAGEARFGLVV 569 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 DQ+ G+ +VV+K L R + G + AT++GDG +ALI+DV L Sbjct: 570 DQVRGREEVVIKPLPKALRGLAGYAGATLIGDGRMALILDVDGL 613 >UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMJ8_DESAH Length = 736 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 211/644 (32%), Positives = 334/644 (51%), Gaps = 63/644 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +S D + F EA E L +E +L+ L+ + + E +N IFR H+IKG +G + Sbjct: 151 ISDDDMEILMDFVSEALENLDTIEVNLIDLEQDPSNMEIINDIFRPFHTIKGVSGFLSLT 210 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + H ENLLD AR GE +N D++ E +D K + Sbjct: 211 KINKLAHATENLLDSARSGEFLINA-------RATDVILESVDTLKT-----------LI 252 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + Q T + + D + + +S K + L + Sbjct: 253 ARINQ------------GTDKGFMQPDDDIDVNDLRDKLQTLQVSLTKGNKEPLGSILVK 300 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + + A PG + + K+ Sbjct: 301 KRMVDQNALDQALDTQKNQPGKKIGEILVEG--------------------------KKV 334 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A Q + +E+ R ++V+ +K+D L++ GELVI QSML Q++ +N Sbjct: 335 QANQVASALIEQ-NQPRKKVDAQVKVSTQKLDDLVDYAGELVIAQSMLKQKT-----IND 388 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 L ++ QL + ++Q MS+RM+P++ F + RLVRDLA K GK+V L + G T Sbjct: 389 PSLSQNVSQLGQIVTNMQNIAMSMRMIPIKATFMKMIRLVRDLAKKSGKEVNLNMAGEDT 448 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+D+++++ + +P+ H++RNS DHGIE RL GK S G +IL A H+GG+I IE+ D Sbjct: 449 EIDRNVVDALYEPMVHMIRNSCDHGIESASDRLEKGKPSQGEIILRAYHRGGHILIEIED 508 Query: 421 DGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG GL+++ IL KA GL E ++D +V LI PGFSTA+ +TDVSGRGVGMDVVK Sbjct: 509 DGKGLDKKTILEKAKETGLITGNEQLTDAQVYDLILQPGFSTAKTITDVSGRGVGMDVVK 568 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 I+K G + I S++G GT I LPLTLAI+DGM VRV +E +++P A+ ++ +P + Sbjct: 569 SGIEKFRGQLNIASEKGRGTKFTISLPLTLAIIDGMLVRVDEEKYVIPTIAIQKAFKPGK 628 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 D + G +++ RG +P++ L ++++ + K G+VV+++S + AL +D+L Sbjct: 629 EDYFTIKGKGEMVKDRGSLIPMIRLNEIYDSSKHKKSVQDGLVVVVESKDEKRALFIDEL 688 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +G+ + V+K+L SN +V GIS IL DG V LI+D+ + +I Sbjct: 689 LGKDEYVIKSLGSNLEEVNGISGGAILADGRVGLILDIHGIFSI 732 >UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDW8_LEPBA Length = 643 Score = 549 bits (1414), Expect = e-154, Method: Composition-based stats. Identities = 195/659 (29%), Positives = 336/659 (50%), Gaps = 31/659 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPD-----AEQLNAIFRAAHSIKGGAGTF 57 M+ D + + EA E L ++E LL + D + L+ +FR H++KG +G F Sbjct: 1 MEREDVLE-YLTEAKECLENIETGLLNFEKTTLDGSLVERDLLDTLFRHFHTVKGSSGFF 59 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD 117 G S + + H ENLLD R + + + + L D++ E + + S + Sbjct: 60 GLSGIVKVAHAAENLLDYLRNKPEVQDEETLEILLSALDLLNELVIHEENSPTGGDLYSE 119 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + L + + S + +S + + + S + + + ++G + Sbjct: 120 DQIRFLEKTNQKL-----SELKNISTDSNLDSNTQVSSKEFGLFLEETPKESGSEEF--- 171 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + T K + + E F E + E P + + Sbjct: 172 ---GIFTSNSTSKNQEEF-GLFQTTPKESVPQEFGLFHQEPITSSLEFGLFEP--TKENL 225 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 + ++ P +++ +S + IR+ +K+D L+++VGE+VI + M+ + +L Sbjct: 226 VPSKSDSQPNAPSTKKEEKKSVQKKDIRIDTDKLDSLLDIVGEIVINEPMVTEH-PDLQK 284 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + + S QL++ R+LQE +S+RM+P+ VFSR RLVRD A K GK V+L + G Sbjct: 285 LKLENFQKSALQLKKLIRNLQEITLSLRMVPIAGVFSRMERLVRDTAKKTGKLVDLVISG 344 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TE+DKS+IE + DPL H++RN++DHG+E PE+R GK+ G + L+A G + IE Sbjct: 345 EDTEIDKSIIEEMYDPLVHIIRNAIDHGLETPEERKEVGKSPKGKIHLTAVQSGKEVWIE 404 Query: 418 VTDDGAGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 V DDG GL R++IL KA + GL +N+ D+EV +F PGFSTA++VTD+SGRGVG Sbjct: 405 VRDDGRGLQRDKILRKAITLGLIHQSEVDNLKDEEVWDFLFHPGFSTAKEVTDLSGRGVG 464 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 +DVV++N+ + G V++ S GT I +PLTLAI++G+ VR ++ FILP V E+ Sbjct: 465 LDVVRKNVTTLKGFVDVSSNPTQGTIFLIRVPLTLAIIEGLVVRKSETYFILPSIDVKET 524 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA---TQGIVVILQSGGRR 591 + + ++ L ++ R + IV++ +F E + +++ +S + Sbjct: 525 IYIKNEPINELYRNNHSIQYRENQISIVDIDLLFGKESELNENNSIEEKYMIVTESHENQ 584 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 ++ D+++G +V+K + ++ + G++ TILG+G LI+DV L Q MA Sbjct: 585 MGIVFDEILGNQSIVIKPISPLFKNINGLAGCTILGNGHAGLILDVRKLIN----QHMA 639 >UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XSL6_PSEMY Length = 739 Score = 548 bits (1412), Expect = e-154, Method: Composition-based stats. Identities = 225/725 (31%), Positives = 355/725 (48%), Gaps = 86/725 (11%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + F DEA +L+ E++LL L D + +N +FRA H++KG AG F + L Sbjct: 8 SQLLRGFIDEAGDLIKQAEEYLLQLDQTPEDEDAVNGLFRAMHTLKGSAGLFSLTPLVSF 67 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD--AYKQSQEPDAASFDYICQAL 123 TH +E+LL R + ++ +++L L D + + + P + A Sbjct: 68 THHLESLLMSVRDSQRKMEPALVSLMLRCLDEIATMVALIDVDSGELPVDETHQNELLAA 127 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSR-----------------------SQSPR 160 P+A + + R P Sbjct: 128 LAAYGAPASVEPAAAPAAASPRPCAQRGAFERCAGCDADGAWHISLRFEADLLRNGFDPA 187 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIE- 217 + + G++ LE L +L ++ + L L + ++ +I V F+ + Sbjct: 188 SFVRYLTRLGDILRLEVIDEALPSLAEMDPESCYIGLEIDLCSEASKAEIEEVFEFIHDF 247 Query: 218 ----------ADQITFETVEVSPKIST---------------------PPVLKLAAEQAP 246 A + ++ P+ + E+AP Sbjct: 248 CTLRILPPQSAQEDYLRLIQELPETDQRIGSILIASGLLTEHELNQGLALQAQAEPEKAP 307 Query: 247 TGRV-------------------EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 G V + + RS EST IRVA K+D+LINLVGELVI+ + Sbjct: 308 LGSVLVEEGMVAPQVVNAALAKQQSVREKRSQESTQIRVAAHKLDELINLVGELVISAAG 367 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 R+ + S + ++ ++E+ + +RM+ + F+R+ R+VRD++ +L Sbjct: 368 AQLRAQAH---GDAGCVESTQTVNQHVEQIREAALKLRMIEIGDTFNRFHRVVRDVSQQL 424 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK + L + G+ TELDKS+I+++ DPLTHLVRN++DHGIE E+RLAAGK + G L L+A Sbjct: 425 GKDIRLQIRGADTELDKSVIDKLADPLTHLVRNAIDHGIESAEQRLAAGKPAEGQLQLNA 484 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVT 466 H+ G I IEV DDG GLN ERI KA +GL ++ N+++ ++ L+FA GFSTA+ V+ Sbjct: 485 YHESGMIVIEVADDGRGLNTERIRQKAIDRGLIDAQANLAEPDIHALVFAAGFSTADSVS 544 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 D+SGRGVGMDVV+ I + G +EI S G G T RI LPLTLAI+DG + + DE F++ Sbjct: 545 DLSGRGVGMDVVRSVIDGLRGSIEIDSVLGAGCTFRIRLPLTLAIIDGFLISLGDEYFVV 604 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL+ V E L+ L G L +RG+ LP + L F++ ++++ +V++ Sbjct: 605 PLDMVTECLEMDAEQLGDSTYG--YLTLRGKPLPCISLAAHFDLPASRSKRRN--IVVVN 660 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 G ++ L+VD L G+ Q V+K L ++ + GI +TILG G VALI+D+ +L + Sbjct: 661 LGRQQAGLVVDHLHGELQTVIKPLGLLFQHLQGIGGSTILGSGQVALILDIPSLFRHLQN 720 Query: 647 QRMAN 651 AN Sbjct: 721 HVEAN 725 >UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28NF4_JANSC Length = 748 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 230/699 (32%), Positives = 362/699 (51%), Gaps = 79/699 (11%) Query: 35 PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLET 94 D E ++ +FRA HSIKGG+G FG L H E LD R G+ + + D+++LF Sbjct: 36 DDDETIHVVFRAVHSIKGGSGAFGLDDLVAFAHHFETALDRVRAGKTESSDDLLSLFQLC 95 Query: 95 KDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKG----ETPSAVTRLSVVAKSEPQ 150 D + + + A + + A + + + L ++ + ET +A T + + Sbjct: 96 GDHLSDLVAAARNGDAVEPAQAEALSRQLDEVIGSPEDTDISETDAAETFEPLTFDFDAF 155 Query: 151 DEQSRSQSPRRIILSRLKAG----------------EVDLLEEELG-----HLTTLTDVV 189 D+ S ++AG E LL + L + D V Sbjct: 156 DDPSSLPGIADDGAEDMRAGFNVTFVAEPELFSCGNEPALLFKALDRYGRVQVAADLDDV 215 Query: 190 KGADSLSAILP---------GDIAEDDITAVLCFVIE----------------------- 217 L +P D ED I V FV + Sbjct: 216 PSLSRLDPTMPYMKWSIDLETDATEDVIRDVFDFVSDCAVIDIAPLDRSGPPLSELPDPI 275 Query: 218 ADQITFETVEVSPKISTPPVLKLA--------------------AEQAPTGRVEREKTTR 257 AD P+I+ P ++ A E + + Sbjct: 276 ADDGPGAVEPTLPQIAPVPPVQEAIVAKVEDTSAPPTPPESSPPQEVGASKPTAPDAAKT 335 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 + +IRV E+VD+LINLVGELVI ++ML+Q +L+ N D++ + L++ A ++ Sbjct: 336 TAAPQTIRVDFERVDKLINLVGELVIKEAMLSQAVEKLNLTNGNDVLQEIEGLKQLAGEI 395 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QE VM+IR P++ +F R R +RD + GK+V LT+ G + E+DK+++ER++DPL H+ Sbjct: 396 QEGVMAIRAQPVKPLFQRMARTIRDASTTTGKRVRLTMKGEAAEVDKTVLERLVDPLNHM 455 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN++DHG+E E+R+AAGK + G + LSA H+ G + IE++DDG G+NR+++ A S+ Sbjct: 456 VRNAVDHGLESAEERIAAGKPAEGTVTLSAAHRSGRVVIEISDDGGGINRDKVRQHAESR 515 Query: 438 GLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 GL + + ++ EV L+F PGFS E+V+++SGRGVG+DVV+ I +GG + I S+ G Sbjct: 516 GLVLPDATLTPSEVDALLFMPGFSMKEEVSELSGRGVGLDVVRSEISALGGRMSISSELG 575 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GT I LPLTLA+L+GM V VA + ++P+ A+ E+LQP A +H + G RVL +R Sbjct: 576 KGTDFSISLPLTLAVLEGMVVEVAGQTMVVPITAIQETLQPSTAQIHTIGSGGRVLSIRN 635 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYR 615 +PI +L +F + +++++++ +R AL+VD+L Q QVV+K+LE+NY Sbjct: 636 TLVPIEDLGAIFGFRDTPMDLDDRVLLVIETETEKRCALIVDRLQDQRQVVIKSLETNYS 695 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 V GI+AATILGDG +ALIVD + + T+A Sbjct: 696 HVSGIAAATILGDGRIALIVDPEDIAGGIALPQSCQTSA 734 >UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMH7_CLOCL Length = 671 Score = 546 bits (1408), Expect = e-154, Method: Composition-based stats. Identities = 189/670 (28%), Positives = 352/670 (52%), Gaps = 30/670 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFS 60 S + + F E+ +L+ +E ++ + A E +N IFR H+IKG + ++ Sbjct: 4 SFEKEPMLEMFIFESTQLIDQLENIMIDSEKNAGFSKEHINEIFRIMHTIKGSSAMMMYT 63 Query: 61 VLQETTHLMENLLDEAR-RGEMQLN-TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + H +E+L R + ++ + ++++ L+ D ++ +L + + +P Sbjct: 64 HISKLAHSIEDLFFYIRENNPLHMDYSTLVDVVLKGIDFIKIELTKIE-TNKPVNGDVAI 122 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + +RQ + K + ++ E ++Q + E + +E Sbjct: 123 LEGEIRQYLVNLKNSNNVETVKKNIELIEEVIEQQPLKNRSKVDENFSKNRFEAVIFFDE 182 Query: 179 ---------------LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 L ++ + S I ++ + +++ Sbjct: 183 GCSMENIRAFSVIHSLKNIAEDIEYTPKELVESKENCEIIKKEGFKVSFATLKSFNEVED 242 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRV--------EREKTTRSNESTSIRVAVEKVDQLI 275 ++ + + Q + +V ++ T ++ + + I V V K+D+L+ Sbjct: 243 LLLKTAVIRKVQLRILEDINQGESEKVNNIHMGLDDKTHTMKNIKQSIINVNVNKIDKLL 302 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 +L+GELVI ++M+ Q + ++ + + L++ + +LQ+ VMSIRM+P+ F + Sbjct: 303 DLMGELVIAEAMVVQ-NPDVQGLQSDSFQKAARLLEKISGELQDVVMSIRMIPVSGTFQK 361 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 R+VRD++ KL K+VEL L+G TE+DK++IE + DPL HL+RNS+DHG+E PE+R+ + Sbjct: 362 MHRVVRDMSKKLNKEVELELIGEETEVDKNIIENLGDPLMHLLRNSIDHGLEGPEERVDS 421 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAML 453 K +VG ++L A++ GG++ I + DDG G++++++L+KA QGL + ++D ++ Sbjct: 422 NKPTVGKIVLEAKNLGGDVWISIKDDGRGIDKDKVLSKAKEQGLINKPEDQLTDKDIYSF 481 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFST + V++ SGRGVGMDVV+ NI+K+GG + I S +G GT I I +PLTLAI+D Sbjct: 482 IFMPGFSTKDNVSEFSGRGVGMDVVRENIEKIGGKIFIDSSKGRGTHIAIKIPLTLAIVD 541 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 GM++ V + + +P+N + ES + + +L + + VRGE I+ L ++ + Sbjct: 542 GMNIAVGNNRYTIPINLIKESFRLIKENLIIDPHDQEMTIVRGESYKIIRLHQLLKIKPK 601 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 T +GI+++++ G+ L D+L+GQ VVVK L + IS T+LGDG ++L Sbjct: 602 NTNIQEGIIIMVEDEGKGVCLFADELLGQQPVVVKALPNYINHRRFISGCTLLGDGGISL 661 Query: 634 IVDVSALQAI 643 I+D+ A+ Sbjct: 662 ILDIPAIINY 671 >UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP0_ACTMD Length = 760 Score = 545 bits (1405), Expect = e-153, Method: Composition-based stats. Identities = 210/655 (32%), Positives = 332/655 (50%), Gaps = 63/655 (9%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D D Q F E+ E L +++ L+ L+ E E+L +IFR H+IKG +G F+ L+ Sbjct: 3 DFDDVVQEFLVESYENLDQLDRDLVALEKEPKSHERLASIFRTIHTIKGTSGFLAFTKLE 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 + TH+ E+LL R G +L+ ++ L D ++E + + Sbjct: 63 QVTHVGESLLVRLRDGTQELDKPSADVLLRMVDTVRE------------------LLAQI 104 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 Q E + + ++ P + + + + +EE Sbjct: 105 EQNGAEGDLDVQDVIDAVTACITGGPAAAPAAPAAAPEVAAVVEAPATPEASDEEPEG-- 162 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 D E E + + A Sbjct: 163 ----------------------------------EDAEHDEHDEPEHREEPSAPAAVNAP 188 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + + RS +SIRV V +D L+ LVGELV+T++ + + + D +L Sbjct: 189 APLVEAADEGGSKRSVADSSIRVDVNLLDALMRLVGELVLTRNQMIRAA---DAAGEPNL 245 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + +L +LQESVM RM P++ ++S+ PR+VRDL+ G++VEL + G+ TELD Sbjct: 246 SRAAQRLNLITSELQESVMKTRMQPIKQLWSKLPRVVRDLSSACGREVELVMEGAETELD 305 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 +SL+E + DPLTHLVRN++DHGIE PE R+A GK+ G L L A H+ G + +EV DDGA Sbjct: 306 RSLLEAVKDPLTHLVRNAVDHGIEPPETRVANGKSREGTLTLRAYHEHGQVIVEVCDDGA 365 Query: 424 GLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++ +++ A A +G+ E+M +DE+ L+F PGFSTA +V++VSGRGVGMDVV+ Sbjct: 366 GIHPDKVGATAVKRGVITQSQLESMDNDEILKLVFRPGFSTAAKVSNVSGRGVGMDVVRA 425 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR-- 538 NI+ +GG V+++S G GTT R+ +PLTLAI+ + V D+ + +P AV E + Sbjct: 426 NIEAIGGAVDLKSVPGKGTTWRLNIPLTLAIVQALIVDSGDQRYAIPQMAVHELVYVDGQ 485 Query: 539 EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVILQSGGRRYALLVD 597 + G V +RG+ LP+V L +V K ++ V +L++ GR++ L+VD Sbjct: 486 SGSVVEYVSGAPVYRLRGKLLPLVRLSEVLGGPSTGKGSDSEIYVAVLKAEGRQFGLVVD 545 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 +++ +VVVK L S ++ V S ATILG+G V+LI+DV +L + T Sbjct: 546 RVLNTEEVVVKPLASRFKDVGCYSGATILGEGQVSLILDVQSLARRAHLSSLERT 600 Score = 61.8 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 + +VAD +PL+ V ++ + G V++ R + LPI L ++ A Sbjct: 617 RLLITKVADRRIAIPLSMVTRLEDFPAKNVERV-GTREVVQYRDQILPITRLSQLLG-AW 674 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIG 601 ++T+ ++ GG AL VD ++ Sbjct: 675 SETDREVISAIVYSEGGHSVALAVDSILD 703 >UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG9_ALIAD Length = 664 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 205/666 (30%), Positives = 337/666 (50%), Gaps = 35/666 (5%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ + F E+ E + +E L L+ E + L+ +FRAAH++KG + T GFS L Sbjct: 3 DEYLEAFLAESMENVERLEAFCLTLEREGSKPDLLDEMFRAAHTLKGMSATMGFSKLAAL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY----KQSQEPDAASFDYICQ 121 TH +E+LL R ++L ++ L D M+ ++ A K+ EPD + D + Sbjct: 63 THRVEDLLGTLRDERVRLEPRHVDALLLAVDRMRARIQAIGVSAKEPDEPDDDAMDALAG 122 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR--------------- 166 ALR A + ++ + + + I L+ Sbjct: 123 ALRGGADVGGTREEDSKPFANLSDWANRAAAEGKELYTVHIRLAPDCVMPGVRLAMAYQA 182 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 LKA + L+ + V+ ++ +A++ D + + V + V Sbjct: 183 LKASAI-LMAAHPAEENVMAGQVEATEAFAAVMVAPGEIDRVRQGVLDVTDVSSCEVSKV 241 Query: 227 EVSPKISTPPVLKLAAEQAP-TGRVEREKTTRSNE------STSIRVAVEKVDQLINLVG 279 S + AP RV R S ++RV V KVD L+N + Sbjct: 242 SESHSAPKEDAPRAEQGDAPIEPRVSRHANGSSPAGADLRRDATLRVPVRKVDALMNTLS 301 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 +LVIT++ LA S D L ++ +L R D+Q+ +M +RM+P+E +F RYPR+ Sbjct: 302 DLVITKTRLATLVSSADDPA---LKEAVERLDRLTGDIQDGLMRLRMVPVETIFHRYPRM 358 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 +RDL +L ++ + + G TE+D+ ++E + + + HL+RN++DHG+E PE R + GK Sbjct: 359 MRDLEHRLQREFDFVMTGLDTEMDRVVLEEMGEVIVHLLRNAVDHGLEPPEARESQGKPR 418 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFA 456 G + L+A G++ +EV+DDG G++R R+L A ++G E MSD+ V L+F Sbjct: 419 RGIVRLAAYTASGHVYLEVSDDGRGIDRGRVLETAVAKGWITPEEGAAMSDESVYALLFR 478 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 PGFSTAE+V+D+SGRGVG+D V+ ++ +GG + + S G GTT I LPLTLAIL + Sbjct: 479 PGFSTAERVSDISGRGVGLDAVREKVEALGGQIRLNSVLGAGTTFTIELPLTLAILSALL 538 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V V +VF +P V E + D+ + V + +PIV+L + + G++ + Sbjct: 539 VSVRGQVFAIPTANVDEVRRVTRDDVRHVQE-RPVFQDSAGIVPIVDLAERLGL-GSRRD 596 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 A V+ + G RR AL+VD ++ + ++V K L + V + ATILGDG V+LI+D Sbjct: 597 AYPQTAVVCRDGKRRLALVVDHVLDELEIVNKPLGRYLQGVREFAGATILGDGRVSLILD 656 Query: 637 VSALQA 642 V ++ Sbjct: 657 VRSIAN 662 >UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Tax=Actinomycetales RepID=A6W4R5_KINRD Length = 822 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 203/647 (31%), Positives = 335/647 (51%), Gaps = 15/647 (2%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ + Q F E+ E L ++ L+ L+ + E L ++FR H+IKG +G FS L+ Sbjct: 3 DMDEIVQEFLVESYENLDQLDSDLVALEQQPGSRELLASVFRTIHTIKGTSGFLAFSRLE 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H+ ENLL R G++ + ++ L D ++ L ++S D + A+ Sbjct: 63 AVAHVGENLLARLRDGQLVMTPVTTDVLLRMVDTIRLLLTKIEESHTEDGVEVAAVVAAI 122 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 R + GE P + + + + +P + + EV Sbjct: 123 RAVL---DGEVPVLPASDGAGVEVVSEPAPAAAPAPAPVAETAPAPVEVAPAPVAEVVPE 179 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + + ++ ++ A + + V P P A Sbjct: 180 PVVEAAPAPVEVAPVVEVAPEPVAAPAPVEAAAPVEVAPVVEVAPEPVAVPAPAAHAAPA 239 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + + ES +IRV VE ++ L+ GELV+ ++ + QR+ L DL Sbjct: 240 PGAPAPGAPAEKASAAES-TIRVDVELLESLVRQAGELVLARNQILQRAGAL---RDEDL 295 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + +L A ++QESVM RM +++++S+ PR+VRDL L ++++L + G TELD Sbjct: 296 TRACHRLNLVASEMQESVMRTRMQAIDHLWSKLPRVVRDLGNMLNRKIKLEMEGGDTELD 355 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 ++L+E + DPLTH+VRN++DHGIE PE R AAGKN VG L L A H+GG + +E+ DDG Sbjct: 356 RTLLEAVKDPLTHIVRNAVDHGIESPEVRTAAGKNEVGTLKLRAAHEGGQVVVEIRDDGK 415 Query: 424 GLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++ I AKA +GL + E+++ +++ +F PGFSTA +VT+VSGRGVGMDVVK Sbjct: 416 GIDPTIIGAKAVEKGLVSAAKLESLTPNDILQFLFLPGFSTAAKVTNVSGRGVGMDVVKT 475 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+++GG V+++S G GT R+ +PLTLAI+ ++V A + + +P ++E + Sbjct: 476 NIERIGGSVDVESVVGQGTVWRLRIPLTLAIVPALTVECAGQRYAMPQVNLLELVSLDTE 535 Query: 541 DL---HPLAGGERVLEVRGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYALL 595 + GG +V +RG LP++ L + + T ++ +L+ GRR+ LL Sbjct: 536 RMSKAIEDVGGAKVYRLRGALLPLIRLEEALELKRPADVELPTNLVIAVLECDGRRFGLL 595 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 VD+++ ++VVK L + + + ATILGDG V+LI+DV +L Sbjct: 596 VDRVLDTEEIVVKPLSGALKAIGAYAGATILGDGRVSLILDVQSLAR 642 Score = 56.4 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 513 DGMSVRVAD-EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF--- 568 + V + +PL+ V + + + + G V+ RGE LP+V L Sbjct: 669 RLLVVGLGGNRRVAIPLDVVTRLEEFKTDSIERV-GRREVVRYRGEILPLVRLANHLGGG 727 Query: 569 -NVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + E T V+ + GR A++VD+++ Sbjct: 728 SRSSYGGEEVTSLPGVVYSARGRSVAIVVDEIVD 761 >UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=22 Tax=Proteobacteria RepID=Q47I49_DECAR Length = 784 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 269/567 (47%), Positives = 349/567 (61%), Gaps = 12/567 (2%) Query: 89 NLFLETKDIMQE-----QLDAYKQSQEPDAA-----SFDYICQALRQLALEAKGETPSAV 138 F + D + E ++ EPD A + A + V Sbjct: 213 EAFADQIDFIAENGAWRVVEGKLSVGEPDPAFGFFDDSPGTPDDDQGYGFFAPLDPSPIV 272 Query: 139 TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI 198 + ++ P + + + D + G L+ K + L Sbjct: 273 ENAAASEQAGDDGYGFFEALPATNVPELMPSVGADDEGDGYGFFAPLSAAEKTPEVLEEG 332 Query: 199 LPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRS 258 + + V A QI E+ + K E + Sbjct: 333 DGFGFFVPVSPSAVSSV-PATQIPSLIAEIDSPLPAVVPEKSPVESRARAAKAAGPAVAA 391 Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 ES SIRV++EKVDQLINLVGELVITQ+ML Q ++++ L+ + QL+RN RDLQ Sbjct: 392 GES-SIRVSIEKVDQLINLVGELVITQAMLLQTATQMQESAPERLVNGLAQLERNTRDLQ 450 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLV 378 ESVMSIRMMP+ +VFSR+PR+VRDL+GKLGKQVEL G +TELDKSLIERI DPLTHL+ Sbjct: 451 ESVMSIRMMPISFVFSRFPRVVRDLSGKLGKQVELKTSGETTELDKSLIERIADPLTHLI 510 Query: 379 RNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQG 438 RNSLDHGIELPE R+AAGK+ +G + L A HQGGNI IEV DDGAGL R +ILAKA +G Sbjct: 511 RNSLDHGIELPENRIAAGKSPIGTITLKAYHQGGNIVIEVGDDGAGLPRNKILAKARERG 570 Query: 439 LTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 VS+ M+D EV LIF GFSTAEQVTDVSGRGVGMDVV+RNIQ MGG VEI+S G G Sbjct: 571 FQVSDQMTDSEVFNLIFEAGFSTAEQVTDVSGRGVGMDVVRRNIQSMGGRVEIESMLGVG 630 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 T + + LPLTLAILDGMS+ + D+ +ILPL+ V+ES QPR D+ L+ RV++VRGEY Sbjct: 631 TRMTVRLPLTLAILDGMSIALGDQTYILPLSYVIESFQPRMGDIKTLSNQARVIQVRGEY 690 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP+V L ++FN+ + + TQGI+V++ + G + AL VD L+GQHQVV+K+LE+NYR+V Sbjct: 691 LPVVVLHELFNIKPSANDFTQGIMVVIDADGVKAALFVDALVGQHQVVIKSLEANYRRVQ 750 Query: 619 GISAATILGDGSVALIVDVSALQAINR 645 GIS ATI+GDG VALI+DVSA+ + + Sbjct: 751 GISGATIMGDGHVALILDVSAIAGMAK 777 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 79/224 (35%), Positives = 117/224 (52%), Gaps = 7/224 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FYQ FFDE+ E LA ME LL L + PD+EQLNAIFRAAHSIKG AGTFGF+ Sbjct: 1 MAIDMSQFYQVFFDESAEHLAAMEGLLLDLDIDNPDSEQLNAIFRAAHSIKGSAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYI 119 L ETTH++ENLLD R+ E+ L D+++ FLE D+++ L+A++ + + D S I Sbjct: 61 DLAETTHILENLLDRIRKQELGLRADMVDAFLECGDLLRGMLEAHQGRGEAVDPQSVASI 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE- 178 C LR+L+ + + + + P ++ K V L +E Sbjct: 121 CARLRELSTDLPPDLAQGGGKALAEGVAAPSVDKRVFDIQFVPTEISAKGDGVTNLLDEL 180 Query: 179 -----LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE 217 L L+ + L D+ ++ + F+ E Sbjct: 181 KSLGQLEILSQPDADIHSVGYWQVRLISDLGQEAFADQIDFIAE 224 >UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSE9_TERTT Length = 822 Score = 544 bits (1402), Expect = e-153, Method: Composition-based stats. Identities = 213/494 (43%), Positives = 309/494 (62%), Gaps = 13/494 (2%) Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + +E + ++V +S S P +A SP Sbjct: 312 ESIEAVFEWVVDDAELVIAQESNSKPKPVADRVTKDVLQEQKAPQAQTPPTNVAAASPPE 371 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSN----------ESTSIRVAVEKVDQLINLVGELV 282 ++AAE + + + E+ SIRV ++KVD LIN+VGELV Sbjct: 372 IPQTKPQVAAESTASVPTAKPAESAPKAKPAPAKKSAETGSIRVGIDKVDNLINMVGELV 431 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 ITQSML Q ++ D L+ + QL++N R+LQESVM IRM+P+ + FSR+PR+VRD Sbjct: 432 ITQSMLGQLGTDFDVNRLPKLLEGLSQLEQNTRELQESVMRIRMLPISFAFSRFPRMVRD 491 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 L LGK ++L ++G TELDK+++E+I DPL HLVRN++DHGIE+P RLA GK + G Sbjct: 492 LGQALGKDLQLEMLGEHTELDKTVMEKIGDPLVHLVRNAVDHGIEMPADRLAKGKPANGK 551 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGF 459 + L+A HQGGN+ IE++DDG GL+RE+I+ KA + L E +D++ LIF PGF Sbjct: 552 ITLNAYHQGGNVVIEISDDGKGLDREKIIEKAIEKNLVTPLECETFTDEQAYDLIFQPGF 611 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STA+ V+D+SGRGVGMDVVKRNIQ + G VEI+S + G+TI I LPLTLAILDG VRV Sbjct: 612 STAQAVSDLSGRGVGMDVVKRNIQALNGIVEIRSTKDKGSTITIRLPLTLAILDGQLVRV 671 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 + +I PL +++ESL R ++ +AGG V ++R +Y+PI+EL+K F V + Sbjct: 672 GNNTYIFPLVSIIESLHCRREFINKVAGGCNVFKLRDDYVPIIELYKTFTVQPDAIDMDH 731 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 ++V++ G + ++VD+L+ Q QVV+K+LE NYR+V GIS ATILGDG+VALI+D++ Sbjct: 732 SLIVVVDYEGGKVGVVVDELLAQQQVVIKSLEQNYRRVDGISGATILGDGTVALILDITG 791 Query: 640 LQAINREQRMANTA 653 + + ++ + +A Sbjct: 792 IVKLAGDKFVQTSA 805 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 14/241 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D++ F+Q F++E+ E L ME L+ L P+ D+E +NAIFRAAHSIKGG+ TFGF+ Sbjct: 1 MTIDLAQFHQVFYEESFEGLDVMESALMELDPDNIDSETINAIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E +LD+ R G + + D +NL L++ D M+E L + + + Sbjct: 61 SVSEFTHDLETILDQVRAGTRKFSGDDVNLCLKSVDCMREMLQLLQGGDDGHTPLSMELK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 ++ T S + +PQ +V + ++G Sbjct: 121 HQFARMLSSDSDVTDSQECAPEQAPEQDPQGPTLWEIRFTPGSDILKTGNDVLRMLRDMG 180 Query: 181 HL--------------TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 L D S +L D + I + +VI+ ++ Sbjct: 181 DLGELLSVSCTPNLPAFNAFDAESCYLSWRILLESDCEKSAIQEIFEWVIDESELGINET 240 Query: 227 E 227 E Sbjct: 241 E 241 >UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR38_9RHOB Length = 698 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 230/678 (33%), Positives = 360/678 (53%), Gaps = 44/678 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQ----PEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +++ Q FF E +E L ++ L L+ PD E +N +FRA HSIKGGA +F Sbjct: 4 LNELRQIFFQECEEQLEELTDGLSELELLQPDHEPDPETINRMFRAVHSIKGGAASFSLD 63 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + H E +LDE R G++ ++ +II +F D + + + + PD + Sbjct: 64 AITQYAHAFETILDELRSGKLTMSREIIPVFYRGADRLTDFIALGEAGSVPDVSELANDI 123 Query: 121 QALRQLALE-------------------------AKGETPSAVTRLSVVAKSEPQDE-QS 154 + L+ + A G S + K +P S Sbjct: 124 SEITALSSDSHQIGEVEFGDDCIAEFVPVALSFAADGADLSDTEHGNYSIKFKPTKALYS 183 Query: 155 RSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF 214 P ++ G VD + LG DV S +L E ++ V F Sbjct: 184 NGHEPVQLFRELETLGSVD-ISFSLGGAAAW-DVNDPDISWHILLSSGCLESEVYEVFEF 241 Query: 215 VIEADQITFETVEVSPKISTPPVLKLAAEQA----------PTGRVEREKTTRSNESTSI 264 + +I E ++ I A + + +S + ++ Sbjct: 242 AHDLAEIQIEILKTEKPIFESSERPAPALSQLEINAGGLANAEEKETSPEKAKSAQKATV 301 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +E VD+LIN+VGELVITQ+++ Q +E + L T++ + R +QE VM I Sbjct: 302 RVDLELVDELINMVGELVITQAVMTQSITESELSVSRQLATTLDDFKTLTRTIQERVMGI 361 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 R ++ +F R R+VR+ A GK+V G TE+D+++IER++DPLTH++RN++DH Sbjct: 362 RAQSVKPLFQRMGRIVRETAQIAGKEVRFITEGEDTEVDRTVIERLVDPLTHILRNAIDH 421 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-E 443 G+E ++R+ GK G++ LSA H+ G + IEV DDG G+NRE++L+ A +GL Sbjct: 422 GLEHTDRRIEVGKVPNGSVKLSAAHRSGRVVIEVNDDGGGVNREKVLSSAIEKGLVSETA 481 Query: 444 NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 + D E+ L+F PGFSTA +T++SGRGVGMDVV I+++GG V I S G GTTI I Sbjct: 482 KLGDAEIDRLLFLPGFSTASAITNLSGRGVGMDVVNSEIRRLGGRVSIISTPGQGTTISI 541 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLA+LDGM V VA++ ++P++A+ E+++P + +H + R++ VR LPI++ Sbjct: 542 SLPLTLAVLDGMVVNVANQTMVVPISAITETIRPEASKVHLIGPEARMISVRDLMLPIID 601 Query: 564 LWKVFNVAGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L +F + GI++I++ G ++AL VD ++ Q QVV+K+LESNY VP ++A Sbjct: 602 LGTIFGFEPERKLGQDGILLIVEDDKGDQFALAVDHILDQRQVVIKSLESNYGHVPYVAA 661 Query: 623 ATILGDGSVALIVDVSAL 640 ATILGDG +ALIVD+ + Sbjct: 662 ATILGDGQIALIVDLDEI 679 >UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter oxydans RepID=Q5FQQ3_GLUOX Length = 682 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 215/674 (31%), Positives = 356/674 (52%), Gaps = 31/674 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + D+ FFDE DE L +E+ L L+ E + E++N IFR HSIKGGA FG Sbjct: 6 FTDDMDAIRLIFFDECDEQLTLLEEELTALEDEPENGEKINTIFRCVHSIKGGAAAFGME 65 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L +HL E++LD R GE+ +N + I +FL+ KD + + + +K + + Sbjct: 66 DLVRFSHLFESVLDRFRSGELSVNAESIRVFLKCKDALSDIVSDFKNGGSTYEVAPEITA 125 Query: 121 QALRQLALEAKGETPS--------------AVTRLSVVAKSEPQ---------DEQSRSQ 157 L +A P+ A ++ + A SE Q + R Sbjct: 126 DLEHYLGSDASEPEPASEEVRTEDIFGMSFAPVKIEIDAPSEQQFSIVLTVSPEFYERGD 185 Query: 158 SPRRIILSRLKAGEVDL-LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI 216 R I+++ G++ + ++ + L + + +L + + + I + + Sbjct: 186 DIRNILMALEGLGQIKVQVDSDAVPLLADISPGQSYLTWQILLTTEKSRESIDEIFDWCG 245 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + Q +V + + P +A E+ K T +S ++RV ++++D+L++ Sbjct: 246 DDLQAVITSVPEEAEQTKIPSAPVAEEKTDPPV---RKGTERKDSATVRVDIQRIDKLVD 302 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 L+GELVI Q + + L + + ++ +LQE+V+++R P++ VF + Sbjct: 303 LIGELVINQGAIQSQMRRNKVPGDSFLGSVVTAQEQLIHELQENVITMRAYPIKTVFQKL 362 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 R+VR+ A KQV L L G TE+D+S++E++ DPLTH+VRN++DHGIE PE R AG Sbjct: 363 GRVVRETARLTEKQVRLVLEGEDTEVDRSILEKLSDPLTHMVRNAIDHGIESPEVRAQAG 422 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIF 455 K+ G L L A + G I +E+ DDGAGL+ +RI KA + + + + +E+ LIF Sbjct: 423 KDPEGLLRLRAFQRSGRIIVEIQDDGAGLDPDRIYEKAVEKKIIEKGQRLDREEIYSLIF 482 Query: 456 APGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGM 515 PGFST +VTDVSGRGVGMDVVK+++Q++ G + I S +G GT I LP TL++++G+ Sbjct: 483 EPGFSTVAEVTDVSGRGVGMDVVKQSLQQINGRIFISSSKGKGTIFSISLPFTLSVIEGI 542 Query: 516 SVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT 575 + + F++P+N V +++ + + G+ R YL ++ + +V K Sbjct: 543 IFKSEGQDFVVPINNVSDTIIFDNSKAFHIGEGKYGYPYRDGYLSVIYASDLLDVPSDKK 602 Query: 576 EATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 Q I ++++ + A +VD++I Q + VVKNLE NYRK+ S ATILGDG+VA I Sbjct: 603 --NQKICFVIENENEEKMAFIVDKIIDQSRFVVKNLEDNYRKIACFSTATILGDGNVAFI 660 Query: 635 VDVSALQAINREQR 648 +DV L ++R Sbjct: 661 LDVEFLFGELLKKR 674 >UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alphaproteobacteria RepID=B9KS14_RHOSK Length = 655 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 213/661 (32%), Positives = 333/661 (50%), Gaps = 22/661 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F EA +L+ +E+ LL L D + +NA+FR H+IKG FGF+ + Sbjct: 4 DDMMAVFRQEATDLIESLERGLLDLSDSPEDRDLINAVFRDLHTIKGSGAMFGFADMAAF 63 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H E+ D R G+ + +II L L +D E + +PD + Sbjct: 64 VHAFESAFDLLRSGKAVVTPEIIRLALSARD---EIIGFLADEPDPDRRRPAILSALEAA 120 Query: 126 LALEAKGETPSAVTRLSVVAKSE------PQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + P+ ++ + + P ++ + G D + +L Sbjct: 121 VGGSGVAPGPAVAAAAGEAPPADRLWFRLSGNALALGARPDLLLAELRELGATD-IRADL 179 Query: 180 GHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + L + S P + + I V F ++ V S Sbjct: 180 SAVPPLDALDPEVCMIGWSMSFPNRVTREAIDNVFLFNEVDLRLEAAPATVPAAASASAP 239 Query: 238 LKLAAEQAPTGRVER---EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 A P + E T ++RVA E++D L++ VGELVI + L Q + + Sbjct: 240 APAATPSPPAAAPRKAVDEATGADKAGATMRVAAERLDHLMDRVGELVIADARLLQLAHQ 299 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 L+ + ++ R A L+++ M IRM+P+ + R+ RL+ L+ +GK V Sbjct: 300 ---SRDPALMAAAEEISRLAAGLRDTTMRIRMVPVRSMVGRFRRLIHGLSEMVGKPVSFV 356 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 ++G TELDK++IE++ DP+ H++RNS+DHG+E P R AAGK + G + L AE G + Sbjct: 357 VLGEETELDKTVIEQLADPIVHMLRNSVDHGLEAPADRAAAGKPAEGRITLEAEQSGAEV 416 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 I ++DDG GLNRERI AKA + G+ + +++ + LI PGFSTAE +T++SGRGV Sbjct: 417 VIRISDDGRGLNRERIRAKAIANGIIGPDAILTESAMNALILEPGFSTAEAITEISGRGV 476 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK+ I+ + G +E+QS +G GTT + LPLTLAI++G+ V VA E F +PL AV E Sbjct: 477 GMDVVKKTIEGLRGSIEVQSVEGRGTTFTLRLPLTLAIIEGLLVEVAGERFSIPLAAVQE 536 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 ++ D G L+VR +P+V L ++F+ G E VVI+++G R Sbjct: 537 IVELPP-DRREEDGSADFLDVRDRLVPLVRLRRIFSSPGMPDEFQ--TVVIVRAGETRAG 593 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 +VD++IG +Q+V+K + + + S ATILGDG+VALI+DV L + + A Sbjct: 594 AVVDRIIGTNQIVIKQMSRLHGGIRAFSGATILGDGTVALILDVPHLAGVGQGVEDRRGA 653 Query: 654 A 654 A Sbjct: 654 A 654 >UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWZ2_SYNWW Length = 927 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 203/744 (27%), Positives = 361/744 (48%), Gaps = 102/744 (13%) Query: 1 MSMDIS----DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGT 56 M ++IS Q FF+E E L +E++ + L+ + D E+LNAI R HSIKG AG Sbjct: 177 MKIEISSFREQLLQDFFEETGEHLDTIEKNCVELEKQPEDLERLNAILRGFHSIKGAAGV 236 Query: 57 FG-----------FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDI-------- 97 F ++ +H E+LL R + L++ +I+L LET D Sbjct: 237 INSMQEEETPDDPFEKIKSLSHAAESLLQTFRNQQAPLSSPVIDLILETVDRTAALSQMV 296 Query: 98 ---------MQEQLDAYKQSQEPDAASFDYIC----------------------QALRQL 126 +++ L E D + I +++ + Sbjct: 297 QGIESEDLPIEDLLSRINALSEADKEANQSIISGPVESIPRQLKAFVNITNQALESMESI 356 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A+ +TP + R+ ++ S I + + L + G Sbjct: 357 ISSAREDTPISRKRVKQYLRALNSIASSSRYLEYEDIFELIASHTQYLNDLIPGEDLVNP 416 Query: 187 DVVKGADSLSAILPG---------------------------------DIAEDDITAVLC 213 ++K S + ++++++ L Sbjct: 417 GLIKELKSHHGQIKKLLGDKVADIKDLLSNVPLEYGEKRIGEILVAQQKLSQEELNEALA 476 Query: 214 FVIEADQITFETVEVSPK-ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVD 272 + +I ++ +V P+ + + + A + E + + SIRV+ +K++ Sbjct: 477 QQKKIGEILVDSGKVEPEDVERALLEQQLAREKSKEVPEPARASSDIGGQSIRVSQDKMN 536 Query: 273 QLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 +L+N++GEL+I+++ + +S++ P ++ ++ R + +LQ+++MS RM+ Sbjct: 537 RLMNMIGELLISKNRVFHLASKIGLEYQLPGLAREVKDIAAEVARISDELQDAIMSARMV 596 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ +F RYPR +RD++ K GK V+L ++G TELDK++IE I DPL H++RN++DHGIE Sbjct: 597 PLRILFQRYPRTIRDISRKAGKSVDLVVLGEETELDKTVIEAINDPLVHMLRNAVDHGIE 656 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--- 444 P+KR A GK G + L A +QG ++ IE++DDG G+N E I KA +GL E Sbjct: 657 APDKREAQGKPRQGKIYLKARYQGNSVIIEISDDGKGMNPEEIKLKALGKGLIRPEQIES 716 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 MS++E LIF PGFST E+V+++SGRGVGMDVVK NI+++GG V + S+ GT + Sbjct: 717 MSNEEAYQLIFLPGFSTREEVSELSGRGVGMDVVKNNIEQVGGTVTMSSQLNQGTNFLLR 776 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 +PL+++I+ G+ V++ + FILPL+++ E+++ + ++ ++R E + ++ L Sbjct: 777 IPLSMSIIRGLMVKMGSQSFILPLDSIEETVKLPANKIRSYK-KIKIADIRDEIVHLIYL 835 Query: 565 WKVFNVAGAKTEA-----TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 + ++ + +V++ G R+ L+VD + + VVK L + Sbjct: 836 KDLLSLKEDFAAPVITFDMRIPIVVINYDGNRFGLVVDSFQHEQEFVVKTLAEELAALKL 895 Query: 620 ISAATILGDGSVALIVDVSALQAI 643 + ATI+GDGSV LI++ L + Sbjct: 896 YTGATIMGDGSVVLILNPGQLYQL 919 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 63/350 (18%), Positives = 141/350 (40%), Gaps = 27/350 (7%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D + Q +E+ E L +E+ +L L+ E D+EQL+A+FRA HS+KG A ++ Sbjct: 8 DDLEILQGIVEESSEHLNGIEEGILKLEAE-FDSEQLDAVFRAMHSVKGVAAFLDLIPIK 66 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-----QEPDAASFDY 118 +T H +E+ + + ++G + ++I ++ L+ DI+Q Q+ + P F+ Sbjct: 67 DTAHSLESFMTDMKKGLYPVTSEITDILLKGVDILQLQIRQLGEHVKKLEANPPREKFEL 126 Query: 119 IC------QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 + + +++ + + + SE Q E +S ++ + + Sbjct: 127 LIKEHGFQEFIQEAEVLRNNTLENRESAQEESCDSEIQVECELPESVANVMKIEISSFRE 186 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 LL++ D ++ P D+ + I+ +++ Sbjct: 187 QLLQDFFEETGEHLDTIEKNCVELEKQPEDLERLNAILRGFHSIKGAAGVINSMQEEETP 246 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 P + A ++ + ++ S+ + I+L+ E V + L+Q Sbjct: 247 DDPFEKIKSLSHAAESLLQTFRNQQAPLSSPV----------IDLILETVDRTAALSQMV 296 Query: 293 S--ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 E + + DL++ + L ++ +S++S P+E + + V Sbjct: 297 QGIESEDLPIEDLLSRINALSEADKEANQSIISG---PVESIPRQLKAFV 343 >UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEH2_CHRVI Length = 735 Score = 543 bits (1399), Expect = e-152, Method: Composition-based stats. Identities = 227/726 (31%), Positives = 354/726 (48%), Gaps = 81/726 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ Q+F E ELL ME LL L+ + D E LNA+FRA H+IKG G FG+ + Sbjct: 1 MNLDSARQSFLAEVAELLQSMEDALLALEDDPDDPESLNAVFRAMHTIKGTGGVFGYEAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH +E L+D R G++ L +I LE +D +DA + PD + +A Sbjct: 61 VEFTHTVETLMDRVRSGQVPLTRPLIATLLECRDHTARLVDAIVAASVPDGPLDPDLARA 120 Query: 123 LRQLAL------------------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL 164 L E + V+ L ++ +D P + Sbjct: 121 GESLLARLGRSGDADQDAAAVARSEPDAKYLPVVSDLWMITLRFKRDTFRDGIDPLSFLR 180 Query: 165 SRLKAGEVDLLEEEL---GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 GE+ + L D G++ + + V F + +I Sbjct: 181 YLGSLGELVHVTTRLDPEARHADDFDPESCYLQFGIGFRGEVDKPTLAGVFEFADQDCEI 240 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPT--------GRVEREKTTRSNESTSI--RVAVEKV 271 + + + + EQ G + R + R+ E+ ++ R + E Sbjct: 241 RILEPDTAHSKYLELLAAVPDEQVGWIGDLLLRIGALTRSELDRALETQAVEARGSTEGD 300 Query: 272 DQLI-NLVGELVITQSML---------------------AQRSSELDPVNHGDLITSMGQ 309 + VGE+++ Q + R +D G LI +G+ Sbjct: 301 TKAHKRRVGEILVEQGSIKPAVVEQAARTQEAARARRQEETRFIRVDAQRLGHLIDLIGE 360 Query: 310 L--------------------------QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 L +++++ + +RM+P+ SR+ R+VRD Sbjct: 361 LVTSSAAIRVLVKRAGIEDMNEVVDGVDYLVAEIRDNALQLRMVPIGESLSRFKRVVRDA 420 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 + +LGK++EL + G TELDK+++E++IDPLTHL+RN++DHGIE PE R A GK + G + Sbjct: 421 SRELGKEIELVITGGETELDKTVVEKMIDPLTHLIRNAVDHGIETPEVRRARGKPAQGTV 480 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTA 462 ++A H G+I +E+ DDGAGLN ERI AKA + GL E+ ++ +E LIFAPG ST Sbjct: 481 RINAYHDSGHIVVEIADDGAGLNVERIRAKAEAAGLVKPEDVLTREETLRLIFAPGLSTK 540 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 EQ T++SGRGVGMDVV+RNI+ + G VE+ S+ G GT + I+LPLTLAI+DG V + Sbjct: 541 EQATNLSGRGVGMDVVRRNIEALRGTVELDSRLGEGTQVTIVLPLTLAIIDGFLVGAGPD 600 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 +++PL V E ++ GE + +RGE LP + L +F AG + + + Sbjct: 601 QYVIPLAQVAECVEMDAERSAR-QQGEHYINLRGEVLPFIRLTDLFENAGIQQGPRRESL 659 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V+++ G + L+VD L+G+ Q V+K L + ++ G++ ATILG G +ALI+DV+ L A Sbjct: 660 VVVRFGHHKMGLVVDTLLGELQTVIKPLGKVFERLRGVAGATILGTGDIALILDVAELAA 719 Query: 643 INREQR 648 I QR Sbjct: 720 IAEGQR 725 >UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBY4_METSD Length = 799 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 250/392 (63%), Positives = 313/392 (79%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + + E+TSIRV VEKVDQLINLVGELVITQ+ML +R S+LDPV H DL+ S+GQL RN Sbjct: 399 EKPAAAETTSIRVGVEKVDQLINLVGELVITQAMLEERISKLDPVTHEDLLNSLGQLTRN 458 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 RDLQESVMSIRMMPM+YVFSR+PR+VRDLA +LGK+VE G++TELDK LIERI+DP Sbjct: 459 TRDLQESVMSIRMMPMDYVFSRFPRMVRDLATRLGKKVEFVTSGAATELDKGLIERIVDP 518 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 LTHLVRNS+DHGIE+P+ R +GKN G L LSA ++GGNI IEVTDDGAGLNRERIL+K Sbjct: 519 LTHLVRNSIDHGIEVPDVRHKSGKNETGRLSLSASNRGGNIVIEVTDDGAGLNRERILSK 578 Query: 434 AASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 A GL VS+ M D +V LIFAPGFSTAEQVTDVSGRGVGMDVVKRN+ MGG ++I+S Sbjct: 579 AKQSGLPVSDTMPDSDVWQLIFAPGFSTAEQVTDVSGRGVGMDVVKRNVSAMGGVIDIRS 638 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G GTT+ I LPLTLAILDGMSV + D ++++PLN ++E++QP+ D+ + G ++ Sbjct: 639 ALGYGTTMSISLPLTLAILDGMSVSLGDNMYVVPLNLIVETMQPQATDIKTVTGAGFMVH 698 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 VRGEYLPI+ L+ +FN T G++VI+++ G++ AL VD L+GQ QVV+K+LE+N Sbjct: 699 VRGEYLPIIPLYSLFNQPTQITNPVDGVLVIIEAEGKKAALFVDGLVGQQQVVIKSLETN 758 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINR 645 YRKVPGIS ATI+GDGSVALI+DV + + + Sbjct: 759 YRKVPGISGATIMGDGSVALILDVPTIIKMGQ 790 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 63/127 (49%), Positives = 89/127 (70%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FFDEA+ELLA+ E LL L + PD+E LNAIFRAAHSIKGGA TFG + Sbjct: 1 MSIDMSQFYQAFFDEAEELLAEAEHLLLALDLDNPDSEDLNAIFRAAHSIKGGAATFGMT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L + ++ FLE KD++ QL+ ++ + D + + Sbjct: 61 DMAEITHVLENLLDKIRKNEMALTGEHVDTFLEAKDVLNSQLEGHRSGADVDRDVQEEVK 120 Query: 121 QALRQLA 127 + L+ L+ Sbjct: 121 RKLKALS 127 >UniRef50_UPI00016C4BDB putative CheA signal transduction histidine kinases n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4BDB Length = 795 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 210/650 (32%), Positives = 316/650 (48%), Gaps = 28/650 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 +D F EA E L++ E LL L+ A+ + +FRA HSIKG A G + ++ Sbjct: 145 ADALAQFTAEALESLSEAEAALLDLETGTDPADAVRRLFRAVHSIKGTADYLGLAQIRAL 204 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H +EN+L+ AR G L+ L L+ D ++ + A + E + Q Sbjct: 205 SHKLENVLELARSGGAALDAPAAELVLQGVDHLKAMVAALTPAGEVARDMNAFAAALDAQ 264 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A A P A + + R + L A L L HL+ Sbjct: 265 SARGATEPAPGAPLDALAEELKAAANGSREGLARVRAAAAALPAEPAGELLALLDHLSAA 324 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + + A E + + + PP +A Sbjct: 325 RERLVAAFE--------------------PDEPEPVLVAPPPQQQPAAAPPPAANLVPKA 364 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML--AQRSSELDPVNHGDL 303 + + ++RV K+D+ +NL GELVI ++ L A R + D L Sbjct: 365 APPDPAAGANKAAPAAKTMRVDQRKLDEYVNLAGELVIARNALVHAHRCFQTDRAARAVL 424 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 ++ ++ R D+Q + M++RM+P+ +F R+PRLVRD+A L KQ+EL L G TELD Sbjct: 425 KDAIDKVCRIVGDVQNNAMAMRMVPVGTIFQRFPRLVRDVAKSLAKQIELRLEGEDTELD 484 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 K + E + DPL HLVRN+ DHGIE P++R AAGK G + L A +G I I+V DDG Sbjct: 485 KQVAEALSDPLVHLVRNAADHGIEAPDRRAAAGKPVAGTVTLRAGREGNAIVIDVQDDGG 544 Query: 424 GLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++ ER+ AKA + G+ ++ +S ++ LIFAPG STA V+D+SGRGVGMDVVK Sbjct: 545 GIDPERVKAKAVAMGVLTADQAAALSREQALQLIFAPGLSTAAVVSDLSGRGVGMDVVKS 604 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI +GG V + S+ G GT +R+ LPLTLA+ + V +F +P++AV E+L+ Sbjct: 605 NIAALGGAVTVHSQPGAGTRVRLTLPLTLAVTTVVLVESGGTLFGVPIDAVQETLKVEPD 664 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKV--FNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 L G V +RG P+ L + + A + VV+L G R+ + VD Sbjct: 665 GFRQLRGVRAV-SLRGAVTPVKSLAALIGLDAPEAAGPRDRVPVVVLNVAGARFGVAVDS 723 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 GQ ++V+K + + G+ ATI+GDG V LI+D L + + R Sbjct: 724 FRGQQEIVLKPVPPLLGHLEGVGGATIMGDGGVVLILDPMGLYRLALDDR 773 >UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Tax=Acidobacteria RepID=Q01VJ7_SOLUE Length = 676 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 212/636 (33%), Positives = 331/636 (52%), Gaps = 69/636 (10%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F E+ E LA++E +L L+ E ++E LNA+FR H+IKG AG +Q+ Sbjct: 100 ELMSDFIVESREHLANVETQVLTLEREPTNSESLNAVFRGFHTIKGLAGFLELWEIQKLA 159 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E +LD AR + + + D++ E D ++ ++ L+ Sbjct: 160 HEVETVLDRARNSQWTITGN-------AIDVILESADYLRR-------WLAHLESVLQHR 205 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A + + ++R+ V+ SEP + + S GEV L E Sbjct: 206 ASDPPQRDEALLSRI-VLLSSEPDAGAPGLDALAMAVTSIPAPGEVPSLIAEPPAAALQP 264 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 A+S Sbjct: 265 APPVPAES---------------------------------------------------- 272 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 + T E+ +++V K+D L+++ GE+VI +S L + EL + + L Sbjct: 273 SAPTPPPNQTGRRETMAVKVDTAKLDYLVDMAGEMVIAES-LVRHDQELSAIKNPLLHRK 331 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + + R +LQ++ M++R++PM +F R RLVRDL+ + GKQVE+ G ELD+++ Sbjct: 332 IAHMTRITAELQKTAMAMRLVPMGPLFRRMARLVRDLSRQFGKQVEMETQGDDIELDRTI 391 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E + DPL H+VRN+LDHG+E P +R GK + L+L A+HQ G + IE+TDDG GL+ Sbjct: 392 VEELSDPLMHMVRNALDHGVEFPSEREKTGKPATARLLLKAQHQAGQVVIEITDDGRGLD 451 Query: 427 RERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 R +IL +A +GL S+ ++D+EV LIF PGF+TA QVT+VSGRGVGMDVV+R+I+K+ Sbjct: 452 RSKILDRAVQKGLVRASDTLTDNEVFNLIFEPGFTTAAQVTNVSGRGVGMDVVRRHIEKL 511 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G +EI+S G G T + LPLTLAI+DG+ V V E +I+PL AV E +P + + Sbjct: 512 RGRIEIRSSLGRGATFLLKLPLTLAIIDGLVVTVGGERYIVPLFAVREMFRPTAETIWTV 571 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 + VRG LP+V L++ F V + QG++V+ G+++ +LVD LIG+ +V Sbjct: 572 QQRAEMALVRGTLLPVVRLYRAFGVTPRSEDPCQGVLVVADVEGQQFCILVDDLIGKQEV 631 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 V+K L ++ V GI+ ILGDG V LI+D+ + Sbjct: 632 VIKTLGDTFKNVSGIAGGAILGDGRVGLILDLDRIF 667 >UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=B8JCH1_ANAD2 Length = 661 Score = 540 bits (1391), Expect = e-152, Method: Composition-based stats. Identities = 233/665 (35%), Positives = 355/665 (53%), Gaps = 31/665 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + ++ +EA E +A++E LL L+ DAE ++ FRA H+IKG FGF + Sbjct: 4 LEQLAASYREEAGERVAELEATLLELEQAPDDAELVSRAFRALHTIKGSGAMFGFDEVAA 63 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E + + R G + + ++I L L KD+++ LD D D + A R Sbjct: 64 FTHELETVFEHVRGGRLAVTRELIGLALAGKDLVRGMLDG---EGGADGRERDRLVAAYR 120 Query: 125 QLALEAKGETPSAVTRLSVVAKS-------------------EPQDEQSRSQSPRRIILS 165 LA +A+ P+ A EP + + + +L Sbjct: 121 ALAPDAEAGAPTPAGGEQADAGCGAAGDAAAALGPRTWRIAFEPNPDLFENGTNPLGLLD 180 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITF 223 L ++ + L D+ + L D ED I V FV + + Sbjct: 181 ELSTLGPCVVVARTDGIPRLEDLAPERCHLAWEVTLTTDRGEDAIRDVFAFVEDRCTLRV 240 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 + + + P LAA R ++S+RVA K+D L++LVGELV Sbjct: 241 QALPSAEAAPAAPSPALAAGAGEIARSTGGPARPPEAASSVRVAAAKLDHLVDLVGELVT 300 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 QS LA+ +++ + G + L+R DL+++ + +RM+P+ F R R+ RDL Sbjct: 301 AQSRLARLAAQAEDAELGAVSEG---LERLTADLRDTALDLRMVPIGTAFGRLRRVARDL 357 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A LGK+++L G+ TELDK++IER+ DPL H++RN+ DHGIE PE R AAGK G + Sbjct: 358 AADLGKEIDLVTEGAETELDKTVIERLADPLVHVIRNACDHGIETPEARRAAGKPPRGTI 417 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTA 462 LSA GG++ +EV DDGAG++ + A+A ++GL +++ ++ L+F PGFSTA Sbjct: 418 SLSARQAGGSVVVEVRDDGAGIDPAAVRARAEARGLLQPGARLAEADLLNLVFQPGFSTA 477 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 VT VSGRGVGMDVVKR+++ + G V ++S G GT +RI LPLTLAI++G+ V V Sbjct: 478 RTVTSVSGRGVGMDVVKRSVEALRGTVALESAPGAGTALRIELPLTLAIIEGLLVEVGGG 537 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 ++LPL AV E + A++ A G + VRGE +P + L +VF V GA+ + Q + Sbjct: 538 SYVLPLAAVEECVGLTAAEVEA-ARGAHLAPVRGELVPYLRLREVFEVRGARPDHEQ--I 594 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 I+++ R L VDQ+ GQ Q V+K++ +R V G+S ATILGDGSVA I+DV+AL Sbjct: 595 AIVRTEAGRCGLAVDQVAGQLQAVIKSMGQMFRSVKGLSGATILGDGSVAPILDVAALLK 654 Query: 643 INREQ 647 + + Sbjct: 655 EHAAR 659 >UniRef50_B0R4J9 Taxis sensor histidine kinase cheA n=4 Tax=Halobacteriaceae RepID=B0R4J9_HALS3 Length = 668 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 200/677 (29%), Positives = 327/677 (48%), Gaps = 50/677 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D+ + F E +E + + LL L+ + + E ++ IFR AH++KG G GF + Sbjct: 1 MDDYLEAFVREGEEHVTSLNNALLELESDPGNEEAMDEIFRTAHTLKGNFGAMGFEDASD 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+LLDE R+G +++ +D ++ E D ++ LD + + + D I +++R Sbjct: 61 LAHAVEDLLDEMRQGNLEVTSDRMDRIFEGIDGIEACLDEIQATGDVDRDVTGTI-ESVR 119 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH--- 181 + E G+ S T S A S D + V + ++G Sbjct: 120 AVLDEVDGDGGSGTTTSSGDAGSPAGDGDVDATRVVDADTIDAAEDPVYHIHIDMGDSQM 179 Query: 182 -----LTTLTDVVKGADSLSAILPGDI---AEDDITAVLCFVIEADQITFETVEVSPKIS 233 + L + + D L A D E L +D+++ Sbjct: 180 KGVDGMFVLEEATEAFDLLGAEPSPDAINDGEYGDGFELVVATPSDEVSDTVAAFPKLSD 239 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSN---------------------------ESTSIRV 266 E AP E ++ E S+RV Sbjct: 240 ATVTAVGDDEHAPDADSGTEADASADDDADDAGTTADSGSSSGGSSAIDNTDTEIQSVRV 299 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 V+++D+L LV +LV T+ L + E D +++ + +L + LQ++VM +R+ Sbjct: 300 DVDQLDELHGLVEQLVTTRIKLRRGMEESD----REVLDELDELDKITSSLQDTVMDMRL 355 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 +PM+ + ++PRLVRDLA + K ++ + G ELD++++ I DPL HL+RN++DHGI Sbjct: 356 VPMKKIVGKFPRLVRDLAREQDKDIDFVVEGDDVELDRTILTEISDPLMHLLRNAVDHGI 415 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-- 444 E P R GK+ G + LSAE ++ I+V DDGAG++ + + KA +G+ E Sbjct: 416 EKPAVREDNGKDREGTITLSAERDRDHVLIQVRDDGAGIDHDTMREKAIEKGVKTREEVQ 475 Query: 445 -MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 M DD+V L+F PGFST ++VTDVSGRGVGMDVV+ + ++ G V + S G GTT + Sbjct: 476 DMPDDDVEDLVFHPGFSTNDEVTDVSGRGVGMDVVRDTVTRLDGSVSVDSTPGEGTTFTM 535 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LP+T+AI+ + V E + +P+ V E + + GE V+ P+V Sbjct: 536 TLPVTVAIVKVLFVESGGEEYGIPIKTVDEISRMKS---VKSVDGEEVITYDETVYPLVR 592 Query: 564 LWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAA 623 L NV +T G++V ++ R+ A+ D + GQ +VVVK E +PG+S A Sbjct: 593 LGDALNVP-DETRNGDGMLVRIRDSERQVAVHCDDVRGQEEVVVKPFEGILSGIPGLSGA 651 Query: 624 TILGDGSVALIVDVSAL 640 +LG+G V I+DV+ L Sbjct: 652 AVLGEGDVVTILDVATL 668 >UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L8C2_9DELT Length = 677 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 229/685 (33%), Positives = 360/685 (52%), Gaps = 48/685 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D Q F +EA ELL +E +L L+ + D+++++ +FRA H+IKG FGF + T Sbjct: 2 DHVQAFREEALELLETVEHTVLELEADPQDSDKVDKLFRAMHTIKGSGAMFGFDEVARFT 61 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E + D+ R G++ + D+++L L +D + L + E A + D + LR L Sbjct: 62 HQVETVWDQVRSGKLTADKDLLDLTLLCRDHILGLLS--RGEDEASAEASDGLSGRLRSL 119 Query: 127 A-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A LEA G+ +++ + R + L + L E+G L Sbjct: 120 AGLEADGDPAGPAPKVAADGPRPVPHAATWWLRYRPKADTYLSGQDPLGLLAEVGALGQA 179 Query: 186 TDVVKGADS--------------LSAILPGDIAEDDITAVLCFVIEADQITFETV----- 226 VV + +L G ED + V FV + + + Sbjct: 180 RAVVHAEATPPLEALDPEAVTVWWDVLLVGGAGEDALRDVFVFVEDEHDVLVSRLAKTAL 239 Query: 227 -----------------EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 E + ++T +LAA + + + + + SIRV Sbjct: 240 RATDLDEVQALLAASAFEDAHALATDLDRRLAARVSRRAKPRPKPKDAGDGAASIRVEAS 299 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 ++D+L++LVGEL I QS L++R++ + +L+R A L++ + +RM+P+ Sbjct: 300 RLDRLVDLVGELAIIQSRLSERAAAGVDPAGRAI---AEELERVAARLRDETLGLRMVPI 356 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 ++ RLVRDLAG+LGK+ G TELDK +++++ DPL H++RNSLDHG+E P Sbjct: 357 GGLYGTLRRLVRDLAGELGKEAAFVGEGGDTELDKHVMDQLKDPLVHILRNSLDHGLESP 416 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDD 448 EKRLAAGK + G + L A+H GG + I +TDDG G++ ER+ KA +GL E + Sbjct: 417 EKRLAAGKPAQGTVRLQADHVGGEVRIVITDDGGGVDLERVRQKALEKGLLAPGEEADER 476 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 + +F PGFSTA++V+ VSGRGVGMDVVKRNI+++GG V ++S+ G GTT+ + LPLT Sbjct: 477 TILNCLFCPGFSTAKEVSSVSGRGVGMDVVKRNIEELGGRVSLESRSGLGTTLTVRLPLT 536 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAI+DG+ VRV +E +I+PL A L+ P G V+ R + P + L ++F Sbjct: 537 LAIIDGLQVRVGNEDYIIPLVAARACLERFLDADPPAVG---VVTWRDKMTPCLSLRRIF 593 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 VAG + V+++ +G L VD ++GQ Q V+K L YR+V +S T+ GD Sbjct: 594 GVAGPSPRYER--VIMVAAGDAEVGLAVDVVVGQRQAVIKKLSDVYRRVECVSGTTVNGD 651 Query: 629 GSVALIVDVSALQAINREQRMANTA 653 G+++LI+DV+ L A+ A Sbjct: 652 GTISLILDVARLARYAGTLGEAHCA 676 >UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Tax=Burkholderiales RepID=A9BRE0_DELAS Length = 732 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 249/411 (60%), Positives = 309/411 (75%) Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 + A P + + ESTSIRV+V KVDQLINLVGELVITQ+MLAQ S Sbjct: 321 QAIQPAGAVAKPAAKTAAQTQQAQMESTSIRVSVAKVDQLINLVGELVITQAMLAQNSHG 380 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LD + L+ + L RN RDLQESVMSIRM+PM VFSR+PR++RDLAGKLGK+++L Sbjct: 381 LDASAYQQLLAGLADLDRNTRDLQESVMSIRMIPMSTVFSRFPRMLRDLAGKLGKKIDLI 440 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 +G +TELDK L+E+I DPLTHLVRNS+DHGIE+PE RLAAGK+ G L L+A HQGG+I Sbjct: 441 TLGEATELDKGLVEKITDPLTHLVRNSVDHGIEMPEDRLAAGKSEHGTLTLAASHQGGSI 500 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 IEV DDG G+NRERIL KA +G+ VS+NM D EV LIFAPGFSTA+ VTDVSGRGVG Sbjct: 501 VIEVRDDGRGMNRERILQKARERGMDVSDNMPDQEVWQLIFAPGFSTADVVTDVSGRGVG 560 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVKRNI +GG VEI+S QG G + + LPLTLAI+DGMSV V+DEV+ILPL++V+ES Sbjct: 561 MDVVKRNIAALGGSVEIESTQGKGMRVAVRLPLTLAIMDGMSVGVSDEVYILPLSSVVES 620 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + D++ +A G ++++VR EY+P+ L K F V + T + I+V+++S G R AL Sbjct: 621 FLVKAEDVNTVANGTQLVKVRDEYMPVFALEKTFRVPRSDTSQSSNIMVVVESDGSRVAL 680 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 LVD+L+GQHQVVVKNLESNYRKVP +S ATILGDG+VALI+D AL R Sbjct: 681 LVDELLGQHQVVVKNLESNYRKVPNVSGATILGDGTVALILDTGALVRRAR 731 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 76/125 (60%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGF+ + Sbjct: 15 FDLSQFYQIFFEEAAENLDQMEQMLLNLDLSAANDEELNGIFRCAHSIKGGAATFGFADV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E +A S + Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQAGNEGEALSTTDLVAR 134 Query: 123 LRQLA 127 + LA Sbjct: 135 IETLA 139 >UniRef50_C7I0R5 CheA signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I0R5_THIIN Length = 674 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 199/680 (29%), Positives = 325/680 (47%), Gaps = 43/680 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD +D F E+ ELL+ + LL L+ + D+E L+AIFRA H++KGGAG + Sbjct: 1 MD-NDILLEFLAESRELLSQAQDQLLRLESQPDDSEALSAIFRAFHTLKGGAGFLEAQNM 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E+L D+ R G+++ +I+ L D++ LD + + P Sbjct: 60 VDWCHHLEDLFDKMRSGKLRATAPMIDAILRATDVITAMLDDMARGENPPPGPAALGADI 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDE---------QSRSQSPRRIILSRLKAGEVD 173 E A + AKS P E Q+ S + + + + + Sbjct: 120 QAFSRGETPALPEVAKDATNKAAKSPPAAEVVREGLWVTQTERDSGSTGLFAERRTADAE 179 Query: 174 ------LLEEELGHLTTLTDVVKGADSL------------------SAILPGDIAEDDIT 209 G T + + D L ++ +I +D+ Sbjct: 180 PTSPASASASANGDSITQDEFERVLDDLYGAGQAPGAAPAGAVAAPASRTADEITQDEFE 239 Query: 210 AVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 VL + A + +P+++ K A + P R + E TSIRV Sbjct: 240 RVLDQIHGAGHAPGQASAPAPEVAQKSEQKAAQKAEPAAPSARSANGSAAEETSIRVDST 299 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 ++DQ +N VGELV+ ++ L+ + + L + DLQ +VM +RM P Sbjct: 300 RLDQAMNQVGELVLLRNRLSAAVARM-AQEDEALARLARETDLAVNDLQNTVMRLRMQPC 358 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 + +F PR+VRD + LGK+V L + G E+DK++++ + PL HLVRN+LDHGIE P Sbjct: 359 KRLFQSLPRVVRDASRSLGKKVRLDIEGEDVEIDKTVVDALSGPLIHLVRNALDHGIEEP 418 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MS 446 E R AGK L + A H G + I+V DDG G+N ++I+ A S+G+ ++ +S Sbjct: 419 EVRRQAGKPEEAVLRVLARHLGDKVQIQVGDDGRGMNAQKIMQHAISKGVITAQEAARLS 478 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 + E+ LIF PGFST EQV+++SGRGVGMDVV+ + + G ++I + G G+T+ + LP Sbjct: 479 EREMLELIFLPGFSTKEQVSELSGRGVGMDVVRSTVASLRGRIDIDTTLGKGSTLTLELP 538 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LT+A+L + R+ E + LP+ A+ L +H ++G V +P ++L + Sbjct: 539 LTMAVLPVLYFRLRRETYALPVAAIENLLAIDPEQVHSISGRLMVQVDGNRVVPYIDLGQ 598 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 + + Q ++++ G L+V + +G VVK L+ ATI Sbjct: 599 LLQDRPIELLKDQSEGILIEQG----LLVVSEAMGTEDSVVKPLD-ISTNDTLYQGATIS 653 Query: 627 GDGSVALIVDVSALQAINRE 646 G+G V LI+D +AL + R+ Sbjct: 654 GNGEVVLILDGAALARVQRK 673 >UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Tax=Halobacteriaceae RepID=C7NUW2_HALUD Length = 670 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 199/678 (29%), Positives = 345/678 (50%), Gaps = 48/678 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + F E++E + ++ LL L+ + D +++IFR AH++KG G GF Sbjct: 1 MD-EQYLDAFIRESEEAITELNNSLLELESDPSDQAAMDSIFRTAHTLKGNFGAMGFDDA 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI--C 120 + H +E+LLD R+G+M + +I++L D ++ + + + EP A + D + Sbjct: 60 SDLAHAIEDLLDAIRQGDMDVTPEIMDLVFAGVDDIEAIVTEIEANGEPSADTADRVEDI 119 Query: 121 QALRQLALEAKGETP----SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 +A+ + +A G S+ + V A +E S IL R+ E + Sbjct: 120 RAVMEDGPDAAGAASDDGRSSGSDGDVDAGAEGDTSASGPSIDVEPILDRVDVPEPESGT 179 Query: 177 EELGHLTTLTDVVKGADSLSA---------ILPGDIAEDDITAVL------CFVIEADQI 221 L + ++G D++ A ++ D + D+I + F + Sbjct: 180 VTLADVDIGGGDMQGVDAMLALDAIEDALDVVATDPSTDEIENGVFDETFAVFAAADEST 239 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT----------------RSNESTSIR 265 V+ + + V ++ A + T +E S+R Sbjct: 240 VRAAVDDVGPVESATVQDVSEAVAAADTADETGATDDAGTSASTSSSASETAVDEIKSVR 299 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 V V+++D L LV +LV ++ L + + + + + G+ ++ +L + LQ +VM +R Sbjct: 300 VDVDQLDDLHGLVEQLVTSRIKLRRAAEQNNVDSTGE---TLNELDKITASLQNTVMDMR 356 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 ++P+ V ++PRLVRDL+ LGK+++ ++ G ELD++++ I DPL H++RN++DHG Sbjct: 357 LIPLGKVVGKFPRLVRDLSRDLGKEIDFSIEGEDIELDRTILTEISDPLMHILRNAVDHG 416 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN- 444 IE P +R GK+ G++ L A + ++ I V DDGAGL+ E I +A QG+ ++ Sbjct: 417 IEPPAERERKGKSREGSIELRARRERDHVVISVEDDGAGLDVEAIREQARKQGIRSADEL 476 Query: 445 --MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 M D + L F PGFSTAE+VT SGRGVGMDVV + ++ G V ++S+ GTT+ Sbjct: 477 DRMDDSAIYDLTFHPGFSTAEEVTGTSGRGVGMDVVHETVSQLDGSVNVESEPDEGTTVS 536 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 + LP+T+AI+ + ++V DE + +P+ V E EA G V++ E PI+ Sbjct: 537 LRLPVTMAIVKVLFIQVGDEQYGIPIKNVDEITDAGEAREI---NGNEVIKHNDEIYPII 593 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L + F+V G +T G+++ ++ R+ AL D++ Q +VVVK LE PG+S Sbjct: 594 HLDEAFDVPGERTN-GDGMLIRVRESERKVALHCDEVNSQEEVVVKPLEGLLSGTPGLSG 652 Query: 623 ATILGDGSVALIVDVSAL 640 ++GDG++ I+DV L Sbjct: 653 TAVIGDGNIVHILDVVTL 670 >UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=Q2ILI0_ANADE Length = 687 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 226/676 (33%), Positives = 351/676 (51%), Gaps = 37/676 (5%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQP---EAPDAEQLNAIFRAAHSIKGGAGT 56 M D S F EA E + + L+ L+ E PD + LN +FRAAH++KG + Sbjct: 1 MPADRSQKALAEFVSEAQETIDALGHGLMRLEAGGHEDPDPDLLNGVFRAAHTLKGLSSM 60 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP-DAAS 115 FG L H +E+LLDE R G L+ ++L LE +++ + P + Sbjct: 61 FGVERLTRLAHALEDLLDEVRLGRRGLDRAAVDLLLEAPEVLSRIVAEEAAGAPPASTDA 120 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAK-----SEPQDEQSRSQSPRRIILSRLK-A 169 + LR + +++ + +E ++ + R+ + + L R+K + Sbjct: 121 AARLTDRLRAGEAPPPARAADPLATVALGPEVRDILTEYEEHRLRANLAKGLALHRVKVS 180 Query: 170 GEVDLLEEEL----GHLTTLTDVVKGADSLSAILPGDIAEDDI--TAVLCFVIEADQITF 223 E+D + +L G L L +VV S P IA + + + I + Sbjct: 181 FELDGFDRDLAALSGRLKRLGEVVSTLPSSDVRDPQSIAFELLFASKEPLDAIRREAGPA 240 Query: 224 ETVEVSPKISTPPVLKL----------AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 VEV P++ PP AA E + + S ++RV + K+D+ Sbjct: 241 AAVEVVPRVEAPPAAARAEPPRRPAGAAALSPAPEPPGDEAASLRSASQAVRVDIHKLDR 300 Query: 274 LINLVGELVITQSMLAQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 L+ VGELV+ ++ L + +L DP +L + L+R +LQ ++ +RM+P Sbjct: 301 LMTAVGELVLVKTSLVALAEQLRADGRDPAVAAELQRTNRTLERRLEELQAGILEVRMVP 360 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 +E VF + R+VR LA ++GK ++L + G ELDK ++E + DPL HL+RN++DHGIE Sbjct: 361 LEQVFDKLSRMVRKLAREIGKDIDLRVSGGEVELDKLIVEDLSDPLMHLIRNAIDHGIEA 420 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---M 445 PE+R AGK +G + L A QG + I V DDGAG++ +RI A +GL + + + Sbjct: 421 PERRARAGKPPLGTVRLEASQQGNKVRIVVEDDGAGIDEDRIREVAVQRGLAAAGDVGAL 480 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 S E+ LIF PGFSTA QVT +SGRGVGMDVVK N+ + G +++ +++G GT I L Sbjct: 481 SRRELMNLIFVPGFSTARQVTSLSGRGVGMDVVKSNVAALSGIIDLHTERGRGTRFEITL 540 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 P+TLAI+ + V VA + +PLN+V+E L+ R AD+ L+ E V+ VRG LP+V L Sbjct: 541 PVTLAIVRALVVWVAGRTYAVPLNSVLEILEVRAADVRTLSTRE-VVTVRGATLPLVRLS 599 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 F + GA + VV++ R + VD ++GQ VVVK L + + V GI+ AT Sbjct: 600 SFFGLPGA-GAPERLFVVVVGLAQERLGVAVDAVVGQQDVVVKPLGAVLQGVRGIAGATD 658 Query: 626 LGDGSVALIVDVSALQ 641 LG L++DV A+ Sbjct: 659 LGSRRTVLVLDVGAII 674 >UniRef50_D1TKM6 Putative CheA signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKM6_9BURK Length = 779 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 292/397 (73%), Positives = 332/397 (83%), Gaps = 3/397 (0%) Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 S E +SIRV VEKVDQLINLVGELVITQ+MLA+ +S DP H L M QL+RNARDL Sbjct: 380 SGEGSSIRVGVEKVDQLINLVGELVITQAMLAETTSTFDPALHDRLFNGMAQLERNARDL 439 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QE+VMSIRMMPM+YVFSR+PRLVRDLA KLGK+VEL G +TELDKSLIERIIDPLTHL Sbjct: 440 QEAVMSIRMMPMDYVFSRFPRLVRDLAAKLGKEVELVTFGQATELDKSLIERIIDPLTHL 499 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRNSLDHGIE E R AAGK+S G L+LSA H GGNI IEV+DDGAGL R++ILAKA Q Sbjct: 500 VRNSLDHGIETVEARRAAGKDSTGQLVLSAAHHGGNIVIEVSDDGAGLRRDKILAKAVKQ 559 Query: 438 GLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 G+ VSE M+DDEV LIF PGFSTAEQVTDVSGRGVGMDVVKRNIQ MGGHVEI S G Sbjct: 560 GMQVSETMTDDEVWNLIFLPGFSTAEQVTDVSGRGVGMDVVKRNIQSMGGHVEITSHAGK 619 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 G+T RI+LPLTLAILDGMSV+V +E+FILPLN VMESLQP+ D++ +A GERV+ VRGE Sbjct: 620 GSTTRIVLPLTLAILDGMSVKVGNEIFILPLNFVMESLQPQAEDIYTVANGERVVRVRGE 679 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 YLP+V L +VFNV+ AK E TQGIV I+Q+ GRR+A+L+D+L+GQ QVVVKNLE+NYRKV Sbjct: 680 YLPLVALHEVFNVSEAKQEPTQGIVTIMQTEGRRFAMLIDELVGQQQVVVKNLETNYRKV 739 Query: 618 PGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 GISAATILGDGSVALIVDV+AL NRE R A+ A Sbjct: 740 HGISAATILGDGSVALIVDVAAL---NRETRHAHGHA 773 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 111/268 (41%), Positives = 136/268 (50%), Gaps = 46/268 (17%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L PD E L AIFRAAHSIKGGA TFGF+ Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVARPDPEDLAAIFRAAHSIKGGAATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L ETTH++E+LLD AR E+ L D+I+ FLETKD++ QL Y+ S EPDA IC Sbjct: 61 ALTETTHILESLLDRARNNELVLRKDMIDTFLETKDVLSGQLADYRASAEPDAEVARAIC 120 Query: 121 QALRQLALEAK-----------------------------------GETPSAVTRLSVVA 145 L QL E++ G P V +V Sbjct: 121 AKLEQLHAESRMGGAPAAAAVETAPVAAQPTATQTTTPTTAVQQQGGTPPEHVVEQAVQM 180 Query: 146 KSEPQDEQSRSQSPR-----------RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 E D + +I L + + +LL EELG+L + VK Sbjct: 181 AGEWMDGEPAQTGQAAGMDDSAGPHLKITLRGVGEKDQELLAEELGNLGNIVGQVKSGGD 240 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQIT 222 L L D+ DDI AV CFVI+ QIT Sbjct: 241 LMLWLSSDVPSDDIIAVCCFVIDESQIT 268 >UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCJ9_DESAA Length = 727 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 213/725 (29%), Positives = 361/725 (49%), Gaps = 74/725 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + + Q FF E D+LL E+ LL L+ ++ IFRA H++K G+ GF+ + Sbjct: 3 EADETLQIFFAETDDLLRSAEESLLRLENNPGSGGEVQEIFRAIHTMKSGSAMVGFTKVS 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQA 122 E +HL+ENLL+ R G++ + +++ LE D +++ ++ + + E + Sbjct: 63 EYSHLLENLLERVRGGQLTVTKPLVSFLLEDIDFLRKMVERGGRGEPEAEPEVLHARKSQ 122 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEP-------------------------------QD 151 L + P + +D Sbjct: 123 LNRFLGMDAISEPEPKPASRSAPAPQAASQAPKAAKEKTAKAPAADGRRYYEIELKFRKD 182 Query: 152 EQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK--GADSLSAILPGDIAEDDIT 209 S Q P ++L + ++ + ++ L S + +++ Sbjct: 183 LFSWGQDPILLLLGLEEVADIVDVTADMSRLPDYESFDPYNLYISWRLTAKTKASLEEME 242 Query: 210 AVLCFVIEADQITFETV----------EVSPKISTPPVLKLAAEQAPTGRV--------- 250 V FV + ++I+ E + V + +L+ A V Sbjct: 243 DVFMFVRDDNEISIEDITARYKEGVDIAVGERPLGEVLLERGAITKGDLDVALGKQKRLG 302 Query: 251 -------------------EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 ++E++ ++ TS+RV VEK++ L+NL E+ I S L Sbjct: 303 EILVEEGKIDSSMLEQVVGQQEESRQTYRKTSVRVDVEKINHLVNLAEEIGIGLSRLQNF 362 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + ++ G+ + L + R+ QE V +RM P+E F R+ R+ RD A + GK+V Sbjct: 363 FGSVPDISGGEADQELENLLKVNREFQERVAQVRMFPLEGTFRRFQRIARDTAFEQGKRV 422 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 ++L+G TELDK +IE I DPL HLVRN +DHGIE PE+R AAGK G + A +G Sbjct: 423 RVSLIGVDTELDKEVIEHITDPLKHLVRNCVDHGIETPEEREAAGKLPEGVIEFRAFQKG 482 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 G I + ++DDG GL+ +RI +A + + E + + V +I PGFSTA +T +SG Sbjct: 483 GMILVRISDDGRGLDLDRIAEQAVEREIIQPGETVDNSNVLDIICQPGFSTASAITALSG 542 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVV+ ++++GG ++I++++G GTT + LPLT A+L+ + ++ D +++PL Sbjct: 543 RGVGMDVVRNEVEQLGGTMQIETEKGKGTTFTLSLPLTFALLEALHIKDQDRSYLIPLWG 602 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI-LQSGG 589 V+ + + A + GER+ RGEY+P+V L KV+ + + G +++ + + Sbjct: 603 VVGTQEYDPAHVKFFGAGERLYTFRGEYVPVVHLSKVYGIDCGEDRVGGGSILVFIDTSR 662 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 +R+ LLVD+++ HQVVVK+LESN++ V GIS ATI+GDGSVAL++D+ AL+ + + Sbjct: 663 QRFGLLVDKVLDPHQVVVKSLESNFKSVAGISGATIMGDGSVALVMDLFALEEMFFNRSS 722 Query: 650 ANTAA 654 A + A Sbjct: 723 ARSDA 727 >UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Proteobacteria RepID=A9AD35_BURM1 Length = 761 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 291/395 (73%), Positives = 332/395 (84%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 E +SIRV VEKVDQLINLVGELVITQ+MLA+ +S DP H L M QL+RNARDLQE Sbjct: 362 EGSSIRVGVEKVDQLINLVGELVITQAMLAETASAFDPALHDRLFNGMAQLERNARDLQE 421 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 +VMSIRMMPM+YVFSR+PRLVRDLAGKLGKQVEL G +TELDKSLIERIIDPLTHLVR Sbjct: 422 AVMSIRMMPMDYVFSRFPRLVRDLAGKLGKQVELVTFGQATELDKSLIERIIDPLTHLVR 481 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NSLDHGIE +KR+AAGK++VG L+LSA H GGNI IEV+DDGAGLNRERILAKAA QG+ Sbjct: 482 NSLDHGIETVDKRIAAGKDAVGQLVLSAAHHGGNIVIEVSDDGAGLNRERILAKAAKQGM 541 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 + EN+SDDEV LIFAPGFSTAE VTDVSGRGVGMDVVKRNIQ MGGHVEI S+ G GT Sbjct: 542 QIPENISDDEVWQLIFAPGFSTAETVTDVSGRGVGMDVVKRNIQSMGGHVEISSQAGRGT 601 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 T RI+LPLTLAILDGMSV+V E+FILPLN VMESLQP D++ + GERV+ VRGEYL Sbjct: 602 TTRIVLPLTLAILDGMSVKVGSEIFILPLNFVMESLQPSNDDIYTVGNGERVVRVRGEYL 661 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+V L +VF+V GA+T+ TQGIV I+++ GRR+A+L+D+L+GQ QVVVKNLE+NYRKV G Sbjct: 662 PLVALHEVFSVEGARTDPTQGIVTIMETEGRRFAMLIDELVGQQQVVVKNLETNYRKVHG 721 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 ISAATILGDGSVALIVDV+AL R A A Sbjct: 722 ISAATILGDGSVALIVDVAALNRETRATHGARAGA 756 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 108/265 (40%), Positives = 143/265 (53%), Gaps = 43/265 (16%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L APDAE L AIFRAAHSIKGGA TFGFS Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVGAPDAEDLAAIFRAAHSIKGGAATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L +TTH++E+LLD AR E+ L ++++ FLETKD++ +QL Y+ S EPDAA+ IC Sbjct: 61 ALTDTTHILESLLDRARNHELTLTKEMVDAFLETKDVLSDQLADYRASAEPDAAAAAAIC 120 Query: 121 QALRQLALEAKGE------------------------------TPSAVTR---------- 140 L +L ++ G P V Sbjct: 121 AKLERLQADSGGAAASVAAPAAVAVAAPASAAPAVAPAADGQRAPDHVVEQAVAAAHPSA 180 Query: 141 -LSVVAKSEPQDEQSRSQSPRR--IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA 197 + +++ DE + I L+ + A + LL EELG+L + + D+L+ Sbjct: 181 AGAAAPQTDAADEGDSNGDGPHLKITLTGVDAKDQALLVEELGNLGRIVGRTEVGDALTL 240 Query: 198 ILPGDIAEDDITAVLCFVIEADQIT 222 L D+ DDI AV CFVI+ QI Sbjct: 241 WLESDVPSDDIVAVCCFVIDESQIR 265 >UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Tax=Clostridiales RepID=A6M0J9_CLOB8 Length = 691 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 205/693 (29%), Positives = 353/693 (50%), Gaps = 54/693 (7%) Query: 3 MDISD-FYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFS 60 MD + + F E +++ ++Q ++ + + E +N IFR H+IKG +G F Sbjct: 1 MDTREPMLEMFIFETFDMIEQLQQLIIDSEKNKRLETEAINEIFRIMHTIKGSSGMMMFD 60 Query: 61 VLQETTHLMENLLDEARR---GEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS-- 115 + +H +E+L R G++ + + +L LE D+++ + + +++ D Sbjct: 61 NISNLSHTIEDLFYFIRESKPGKIDYSK-LTDLVLEGSDLIKIETEKINNNKDTDGDFTL 119 Query: 116 -FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + L+ L + S + E +++ + R L + + Sbjct: 120 FIEKVKGFLKLLKTYDENSEDSGNGGADELVSEEDVEQKYYLSTDRVNSNLNLFSATLFF 179 Query: 175 LEE---ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL-------------CFVIEA 218 EE E T+ +K +S P DI E++ T + + + Sbjct: 180 DEECDMENIRCFTVVHQLKEISEVSYYYPEDIIENNDTCEIIKKQGFKIFFKTNQSIEDI 239 Query: 219 DQITFET--------------VEVSPKISTPPVLKLAAEQAP------------TGRVER 252 + E +E S + S K Q + Sbjct: 240 RTLLMENAFLNNVDINKFYSEIEFSEQFSEQFSKKNEKPQEDIIKSINNIVNDTNDNEKV 299 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + S + + I V V K+D+L++LVGELVI+++M+ ++ E+ + + Q ++ Sbjct: 300 ASKSLSYKQSLISVDVNKLDKLMDLVGELVISEAMVT-KNPEISELQLDSFNKAARQHRK 358 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 DLQ+ VMSIRM+ + ++ R+VRD+ KL K+VEL ++G TE+DK++IE I D Sbjct: 359 RLSDLQDVVMSIRMVSLASTLTKMNRIVRDMCKKLNKEVELEIIGQETEVDKNIIEHIGD 418 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H+VRNS+DHGIE E+RLA GK S+G + + A++ GG + I + D+G GLN+++IL Sbjct: 419 PLMHIVRNSMDHGIETKEERLANGKPSIGKITIEAKNTGGEVWIIIKDNGKGLNKDKILK 478 Query: 433 KAASQGL--TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 KA GL +++D E+ +IF PGFST E VT+ SGRGVGMDVV I+K+ G V Sbjct: 479 KAKDNGLLKVKENDLTDREIYSMIFLPGFSTKENVTEFSGRGVGMDVVTNEIEKIRGIVT 538 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 + S G TT I +PLTLAI+DGM+++V VF +P+ ++ +S ++ D+ Sbjct: 539 VDSIPGEETTTSIKIPLTLAIIDGMTIKVGKSVFTIPVTSIRQSFIIKKEDIIRDIDNNE 598 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 ++ +RGE I++L + +N+ GIV++++ G+ + D+LIG+ QVV+K L Sbjct: 599 MILIRGECYSILKLHEFYNIKTNVVNIEDGIVIMVEDQGKAKCIFADELIGEQQVVIKAL 658 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +KV IS ++LGD +++LI+D+S + + Sbjct: 659 PEYIKKVKAISGCSLLGDATISLILDISEIVNL 691 >UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia RepID=B7J2C9_BORBZ Length = 714 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 220/714 (30%), Positives = 359/714 (50%), Gaps = 79/714 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 I F +F +E+ E ++D+EQ LL L+ + D + +N+IFR H+IKG +G FGF+ Sbjct: 7 IDKFKNSFKEESIENISDIEQALLNLEV-SSDQDIVNSIFRNLHTIKGSSGMFGFNFTAS 65 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD------------ 112 H +E +LD + G+ N I+ L + D ++E ++ + E D Sbjct: 66 LVHEIETVLDVVKNGKAAFNQAAIDATLMSVDFIRELIEGDEVISEIDFDKRKQFLVNEI 125 Query: 113 ----AASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEP--QDEQSRSQSPRRIILSR 166 S D L + S+V SV SE DE +S+ IL Sbjct: 126 RKVLDISNDVKGAFQEALENDFSKSDNSSVLEESVKVNSENKFDDEALQSEFKSYKILFS 185 Query: 167 LKAGEVD-----------LLEEELGHLTTLTDVVKGAD---------SLSAILPGDIAED 206 G + L+ G++ D + + L + + + Sbjct: 186 PAKGILFHGHKPINLLSKLINLGSGYVRAKVDNIPDLELISPDNVYVDWEIRLDTEESRE 245 Query: 207 DITAVLCFVIEADQITFETVE----------VSPKISTPPVLKLAAEQAPTGRVE----- 251 I + F+ +I + ++ V K L ++ E Sbjct: 246 SIEDIFTFLDSQSKIDIQELDKCLEANEGDNVESKNFNLLHLDRNSKDLTNSSFEKSEFV 305 Query: 252 --------------REKTTRSNES-TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 ++ T RS + SI+V +K+D L+NLVGELV QS L S E + Sbjct: 306 GKSFFNGDKNRSNIQDDTARSKVNIASIKVDSKKLDHLVNLVGELVTIQSKL---SKEAE 362 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 N L + + +L++ +R +P+E +F ++ R+V+DL+ LGK + Sbjct: 363 NRNSNILNSISAEFSLLINELRDYTTGLRTVPIEILFVKFQRIVKDLSTSLGKSILYHAS 422 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G T LDKS+IE++ +PL HL+RNS+DHGIE ++R + GK+ G + LSA G ++ + Sbjct: 423 GGDTVLDKSIIEKLNEPLVHLIRNSIDHGIESAQERESLGKDPKGIIKLSACQSGDSVIV 482 Query: 417 EVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 + DDG GL++ +IL KA + + ++ +S+ +V LIF PGFSTA VTD+SGRGV Sbjct: 483 IIEDDGRGLDKNKILKKAIERNIISDSVAKTLSEIDVYNLIFEPGFSTASSVTDISGRGV 542 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK+ ++ + GHV ++S+ G T I+++ PLTLAI++G VRV DE FI+PL+ V Sbjct: 543 GMDVVKKQVESLRGHVVLESEFGKYTRIKLIFPLTLAIIEGWLVRVKDEHFIVPLSNVES 602 Query: 534 SLQPRE--ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 L+ + + + + V+ RG + + L + F V+ K+ + Q VV++ + + Sbjct: 603 CLESNKLISQMDGIETKSNVMNYRGSMISYIRLREFFQVSSEKSLSEQ--VVVVNTNSGK 660 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 ++VD+++GQHQ V+K L Y +V G+S ATILGDGS+AL+VD+ A+ + + Sbjct: 661 MGIVVDEVLGQHQTVIKALGKIYSRVEGVSGATILGDGSLALVVDIDAITKLIK 714 >UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 Length = 674 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 208/672 (30%), Positives = 350/672 (52%), Gaps = 51/672 (7%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPD---AEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +++ E +L+ +E LVL E + E ++ IFR H+IKG + + + Sbjct: 10 MLESYIFETSDLINKLET--LVLDNENSNCYCQECIDEIFRIVHTIKGSSAMMSYDYISM 67 Query: 65 TTHLMENLLDEARRGEMQ-LN-TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H +E+LL R + L+ ++ +L L++ D ++ ++D K D I + Sbjct: 68 LAHSIEDLLYFIRENNSEDLDYKELSDLILKSVDFIKGEIDKIKIGNGVQGICDDMINEN 127 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 ++ L +K + P + + +S ++ L + D + E Sbjct: 128 IKFLEKLSKCDLPKK--------DNIDSQKVDKSDIDKKDTLYKAVIFFEDNCQMENLRA 179 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITA-----------------------------VLC 213 T+ + K +P DI ++D T +L Sbjct: 180 YTVVETFKEFCHELYYVPEDIIDNDNTCNLIREEGFKLFIKCDKSYEEVEQILKHTVLLK 239 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 V E V + L P + +SN I V VEK+D+ Sbjct: 240 SVKLIKMEEDEEVHPVSRPKENVDLNGHVPYQPLPGKQERIPDKSNVQNFINVKVEKLDK 299 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L++LV E+VI +SM+ + + +L + + S QL++ +++Q++VMS+RM+P+ +F Sbjct: 300 LMDLVEEMVIAESMVTE-NPDLKGLKLDNFRKSARQLRKITKEIQDTVMSVRMVPVYGIF 358 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 + R+V D+ KL K+V+L +G TE+DK++IE I DP+ HLVRNS+DHGIE E R Sbjct: 359 HKMNRIVHDMNKKLNKKVKLKFIGEDTEVDKNIIEHISDPIMHLVRNSIDHGIESAECRR 418 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVA 451 + GK+ +GN+IL A++Q + + + DDGAG N+E IL KA +GL ++ MSD E+ Sbjct: 419 SLGKSEIGNIILEAKNQDNYVVVMIKDDGAGFNKEIILKKAREKGLLKKSADEMSDKEIY 478 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 LIF PGFS E +T+ SGRGVGMDVV +NI+++GG V +QSK GT I I +P TLAI Sbjct: 479 DLIFIPGFSIKENITEFSGRGVGMDVVMKNIKEIGGIVTVQSKDNEGTLITIKIPSTLAI 538 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 +DG++VRV D + +P+ + + +P+ D+ + E ++ VR + P++ + K++ + Sbjct: 539 IDGINVRVGDYYYTIPVTVITKFFRPKADDIFHIEKNE-MIMVREKCCPVIRIHKLYGIE 597 Query: 572 GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK---VPGISAATILGD 628 E GI+V++++ + + D+L+GQ QVVVK L ++ + GIS T+LGD Sbjct: 598 TNIKELADGIIVMVKNEDKFVCIFADELLGQQQVVVKPLPDYVKRIKNIKGISGCTVLGD 657 Query: 629 GSVALIVDVSAL 640 GS++LI+++ L Sbjct: 658 GSMSLILNIGEL 669 >UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S733_CHRVI Length = 797 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 240/453 (52%), Positives = 311/453 (68%), Gaps = 6/453 (1%) Query: 200 PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT--- 256 PG + E F + SP+ A + +ERE Sbjct: 342 PGMDRVAAVAHQERLDDERGYGLFNSAPGSPESRLDDDASAPISTAASPAMERESRAGNA 401 Query: 257 ---RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + +SIRV+VEKVDQLINLVGELVIT +MLA ++ LDPV H ++ + L+RN Sbjct: 402 PKRPATTDSSIRVSVEKVDQLINLVGELVITHAMLADSAAGLDPVVHERIMAGLSNLERN 461 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 +RDLQE+VMSIRMMP+ +VF+R+PR+VRD A LGK+V L L+G TELDK LIER+ DP Sbjct: 462 SRDLQEAVMSIRMMPISFVFNRFPRVVRDTAASLGKRVTLKLIGEDTELDKGLIERLADP 521 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HLVRNS+DHGIE PE RLAAGK G ++L A H+GG++ +EV+DDGAGL RE++LAK Sbjct: 522 LNHLVRNSIDHGIERPEARLAAGKPETGEIVLRASHRGGSVVVEVSDDGAGLKREKLLAK 581 Query: 434 AASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 AA QG+ + +N SD +V LIF GFSTAE+VTD+SGRGVGMDVV+RNI+ M G VE+ S Sbjct: 582 AAKQGIPMPDNPSDKDVWQLIFHAGFSTAERVTDISGRGVGMDVVRRNIEDMNGRVEVDS 641 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G GT I I LPLTLAILDG+SVR+ +E+FILPL + ES+QPR + G RV++ Sbjct: 642 TAGRGTHITIRLPLTLAILDGLSVRMGEEMFILPLTVIQESIQPRAEQFKTVVGKGRVVQ 701 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 + EYLP+V L VF+ + GI+VI+++ R A+LVD+L+ QHQVV+K+LE+N Sbjct: 702 INDEYLPLVSLHDVFSSGRPEPNLLDGILVIVETNEGRAAVLVDELVAQHQVVIKSLETN 761 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINRE 646 YRKV G+S ATI+GDG VALI+DV AL +NR Sbjct: 762 YRKVEGVSGATIMGDGRVALILDVDALVRLNRR 794 Score = 165 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 87/234 (37%), Positives = 123/234 (52%), Gaps = 11/234 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FF+EA E LA ME LL L EAPD E LNAIFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDMSQFYQVFFEEAGENLAAMESLLLELDVEAPDLETLNAIFRAAHSIKGGAGTFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+ E+ ++++ FL+ D+++ QL A+++ +E + + +C Sbjct: 61 DMAEVTHILETLLDRLRKQELAPTVEMVDAFLQAGDVLKSQLQAHQEGEEYEDSRVTEVC 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG-------EVD 173 Q L +L A+ + S + P S L+ AG E Sbjct: 121 QHLERL---ARADDAEGDVPASSAGEIRPTGTVEAESSVTHWRLAFEPAGIGQGTPDERR 177 Query: 174 LLEEELGHLTTLTDVVKG-ADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 L E LG L + D+ G + L I +L F+ E Q+ +T+ Sbjct: 178 ALFEALGELGRIQDIGAGETERCLWQLTSAAGRGAIEEILAFICEPGQVEIDTI 231 >UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAP5_PHEZH Length = 1001 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 217/715 (30%), Positives = 331/715 (46%), Gaps = 69/715 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D F E E L ++ L+ + + D E L+ IFR H+IKG G G LQ Sbjct: 8 LDDLVSDFIAETREGLEALDSELVRFEQQPDDPETLSGIFRLIHTIKGTCGFLGLMRLQT 67 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L R G + + ++ L+T D+++ +DA + + L Sbjct: 68 VAHAAENVLGGFRDGVVPVTPTAVSAVLDTVDLIRSLVDALASTGAEPEGDDSALIGRLE 127 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSR-SQSPRRIILSRLKAGEVDLLEEE--LGH 181 + A G+ P+A + + +D +S Q L + L ++ LG Sbjct: 128 AVMETAAGDEPAAAAPTAEAPQPAAKDARSLIEQLGGDATLDAAAEMSLARLRDDARLGG 187 Query: 182 LTTLTDVVKGA----DSLSAILPGDIAEDDITAVLCFVIE-------------------- 217 L D + D L I A D + L V + Sbjct: 188 LFARADTDRLLAAVRDGLCGIARKGEASDALARALAQVADGAVDAGAVGAVFDVAAAALA 247 Query: 218 ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE----------------- 260 ++ + ++ PP A E E S Sbjct: 248 DLEVDAAAIAALRSLACPPPEPRAEADPEPALAEAEPEASSAPDPEPALEASPAPVAATA 307 Query: 261 -----------------STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + +IRV+V+ ++ L+ +V ELV+ ++ L Q L Sbjct: 308 PAARSAPPAAGGEAAGPAQTIRVSVDALEHLMTVVSELVLIRNQLIQT---LRLEPESPF 364 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + +L + +LQE VM+ RM P+ +++ PRLVRDLA LGK ++L ++G TELD Sbjct: 365 AAPLNRLNQVTSELQEGVMTTRMQPISGAWAKLPRLVRDLAQDLGKSIDLVMLGQETELD 424 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 + ++E I DPLTH++RN+ DHG+E P +R AAGK G + L A H+GG I IEV DDG Sbjct: 425 RQVLELIKDPLTHMIRNAADHGLETPAERRAAGKPETGRITLQARHEGGAIVIEVADDGR 484 Query: 424 GLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 GL+ E+I AKA + GL E MSD + LIF PGFSTA QVT VSGRGVGMDVV+ Sbjct: 485 GLSAEKIRAKALASGLITPTQAEQMSDADARQLIFLPGFSTASQVTAVSGRGVGMDVVRT 544 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+K+GG +E+ + G GT I +PLTL I+ + V E F +P +AV+E + A Sbjct: 545 NIEKIGGAIEVGATDGGGTRFTIRIPLTLTIVSALIVECCGERFAMPQSAVVELVSASGA 604 Query: 541 DLHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 H + G VL +R LP+V L + + + + +++ + G + ++VD+ Sbjct: 605 SGHAIEYIDGSAVLRLRDRLLPLVSLQSLLGLEPVGEPSNETCILVARVGAFTFGVIVDR 664 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 + ++VVK + + R + S ATILGDGSV LI+D + + + A Sbjct: 665 VFDTEEIVVKPVATVLRHLKLYSGATILGDGSVILILDPKGISLEAGAGQTGSLA 719 Score = 42.1 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 515 MSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 + R A+E L V + + + G V++ RG +P++ + A A Sbjct: 738 LVFRAANETLKAARLATVSRIEELAADQIERV-DGRAVVQYRGRLMPVLGVDA--QPAAA 794 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIG 601 + +++ R LLVD+++ Sbjct: 795 WEGEGRRPLLVFAQEDRAVGLLVDEIVD 822 >UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=Q311M2_DESDG Length = 954 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 201/648 (31%), Positives = 320/648 (49%), Gaps = 62/648 (9%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D F D + + L L ++ + ++A+FR+ +++ G G + Sbjct: 354 DDLNVFRDTVSQQFESIRIALAELSKDSSQKDFVDALFRSLVTVQNSCGYMGLEETKVYA 413 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 L+D+AR ++ + + +L + I+++ +DA QL Sbjct: 414 ERTAKLVDQARSSDLDFSL-MTDLLEQECAILKDMVDA--------------------QL 452 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + + + A P Q+ P + + K Sbjct: 453 TQLSSPAASTGADDAAEPAGDSPAARQAGKTEPPAAPVQKEKTAPA-------------- 498 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 A A + + + P Sbjct: 499 ----------------AAPAAKPAPAPRPSAKPAPKPAAPKPAAPAKPAAAPQAGGAAQP 542 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVNHGDL 303 +++ + S++IRV EK+D L+NL+GEL+I ++ MLA+R VN D+ Sbjct: 543 PAGNDQQAVHKGKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEGETDVNVADV 602 Query: 304 ITSMGQ----LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 ++ + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+VEL + G Sbjct: 603 AQNLTETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVELIMEGEE 662 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDKS++E I DPL HL+RN++DHG+E E R+A GK G + L A H+G ++ IE+ Sbjct: 663 TELDKSVVEVIGDPLVHLIRNAMDHGVEPEEDRIAKGKRPKGRVWLRAYHKGNSVAIEIE 722 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ ER+ A ++G+ E + D E LIFAPGFS+AE +TD+SGRGVGMD Sbjct: 723 DDGKGIDPERMREVAVNKGIISPEEAKSLDDREAMELIFAPGFSSAETITDISGRGVGMD 782 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV+ NI+ + G V IQS+ G GT + LPLTLAI+D + V V+DE + +PL+AV E+ + Sbjct: 783 VVRTNIKNLKGSVSIQSEIGKGTRFILSLPLTLAIIDALMVNVSDETYAIPLDAVSETTK 842 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 L + + V +RGE L IV L ++ + G + VV++ RR L+V Sbjct: 843 IEAERLTDVNNRKAV-TLRGEVLGIVTLSELLGLEGTTEDDEVLSVVVIHDNDRRLGLVV 901 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 D+L+ + ++V+K L + GIS ATI+GDGSV LI+D + + Sbjct: 902 DRLLERQEIVIKPLGEYLGDLRGISGATIMGDGSVVLILDPHEIYLMA 949 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 2/142 (1%) Query: 1 MSMDI--SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFMDPEIFADFILEAKEHLETIEPNLLELENSPDNLSLLNEIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + H EN+LDE R+GEM ++++I+++ L D +++ +D + + Sbjct: 61 LNRINSLAHKAENILDELRKGEMSVSSEIMDVILSATDALRQMIDNLDVTGQEGDVEIAS 120 Query: 119 ICQALRQLALEAKGETPSAVTR 140 I + + + P+ Sbjct: 121 IVEIIDAIMAGGGIAAPAPSAS 142 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 48/258 (18%), Positives = 101/258 (39%), Gaps = 9/258 (3%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +EA ++ ++ LL L+ + + +N +FR H++KG +G GF+ L T Sbjct: 189 HLRDFVEEARDISENLNAGLLELETNPHAEGDLVNDLFRYFHNLKGNSGIIGFAELNSLT 248 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALRQ 125 H E LL++ R+GEM + +++L L D + ++ + D + + L++ Sbjct: 249 HEAETLLNKVRKGEMPSSHALVDLLLVVVDYIDAMVERIDATTGVATPVRIDDLLERLQK 308 Query: 126 LALEAKGETPSAVTRLSVVAKSE-PQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 E + P+ A+ E PQ+ Q P + + ++++ + + Sbjct: 309 AVTEGIIDAPARPAGQQTAAQPEAPQESAPAQQEPSSAVAPGVDPDDLNVFRDTVSQQFE 368 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + A L D ++ D L + Q + + + +Q Sbjct: 369 SIRI------ALAELSKDSSQKDFVDALFRSLVTVQNSCGYMGLEETKVYAERTAKLVDQ 422 Query: 245 APTGRVEREKTTRSNEST 262 A + ++ T E Sbjct: 423 ARSSDLDFSLMTDLLEQE 440 >UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XR52_DESMR Length = 718 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 225/713 (31%), Positives = 344/713 (48%), Gaps = 74/713 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ + +E ELL ++EQ LL L+ D +L+A FRA H+IKGG FGF + Sbjct: 3 DVDPSIALYIEETRELLGELEQGLLELETNPADTARLDACFRAMHTIKGGGAMFGFEEIS 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH +E +LD R G++ ++ ++++L L KD + L+A + Q+ + D + + Sbjct: 63 RFTHDVETVLDRVRTGDLPVSRELLSLTLAAKDHILTLLEAPRDQQDAHRNASDRLLASF 122 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSR--------------------------SQ 157 P P + Sbjct: 123 AAYLPGGAATAPDLAGDAGEPPILRPASGEHEYACPALPGPPSIYWVRLRPNPDMLLTGN 182 Query: 158 SPRRIILSRLKAGEVDLLE--EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFV 215 P R++ GE+ +L + D + ++ A D++ V FV Sbjct: 183 DPVRLLAELDTMGEMHVLRHGPKPVLDNDDFDPERVYGLFDMLIATPCAVDNLRDVFIFV 242 Query: 216 IEADQ-------------------------ITFETVEVS----------PKISTPPVLKL 240 + E +EV+ + Sbjct: 243 EGDSEVGIHHLHTGILRAADLDELLAALKGHDDEDLEVAGNRLEAALAAKLALIESAKQK 302 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + + + + ++RV ++D L+++VGELVI QS L Q + D Sbjct: 303 SQTKKGSEPRAAPQAKAPAAAATLRVDAARLDSLVSMVGELVILQSRLRQAAKARDLDAV 362 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 ++ L+R +L++ + +RM+P+ VFS++ RL RDLA LGK VE G T Sbjct: 363 TEVDED---LERLTDNLRDVALGLRMLPIGSVFSQFTRLTRDLAANLGKDVEFVAHGGET 419 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDK++I+RI DPL HL+RNSLDHG+E PE+R AAGK+ G + LSA H GGN+ I + D Sbjct: 420 ELDKTVIDRIKDPLVHLLRNSLDHGLERPEERQAAGKSPQGRVTLSANHSGGNVVIVIAD 479 Query: 421 DGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG G++ + KA +GL E S+ E+ IFAPGFSTA +V+DVSGRGVGMDVVK Sbjct: 480 DGRGIDVAAVRRKAVERGLVAPEAEPSEKELLDCIFAPGFSTAAKVSDVSGRGVGMDVVK 539 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL-QPR 538 +NI+ + G VE+ S G G T+ I LPLTLAI+DG +V V + FI+PL + + Sbjct: 540 KNIEALRGTVELASVLGQGATVTIRLPLTLAIIDGFNVMVGGDSFIVPLANLRGFQERFV 599 Query: 539 EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 E + + ER+ G P+V L ++F+V G + + VVI ++ G VD+ Sbjct: 600 EGQVRTVDTIERM----GSMAPVVSLRRLFDVPGDQPGYER--VVITEAEGETVGFCVDK 653 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 +IG+ Q V+K+L+ YR + IS TI GDGS++LI+DV L R + + Sbjct: 654 VIGRQQAVIKSLDDCYRHLKWISGTTINGDGSISLILDVPQLVRFVRGREDSR 706 >UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomonas aeruginosa RepID=A3LGZ6_PSEAE Length = 539 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 232/393 (59%), Positives = 294/393 (74%), Gaps = 1/393 (0%) Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 ES SIRV+VEK+D LINLVGELVITQ+ML Q +LDP H L ++ QL+ N RDLQE Sbjct: 144 ESGSIRVSVEKIDSLINLVGELVITQAMLGQLGEQLDPSRHERLQHALAQLEHNTRDLQE 203 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVMSIRM+P+ ++FSR+PRLVRD A +LGKQVEL L G TELDKS+IE++ DPLTH+VR Sbjct: 204 SVMSIRMLPINFIFSRFPRLVRDTATRLGKQVELHLHGEHTELDKSVIEKLSDPLTHIVR 263 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGIE P +RLAAGK + G + L+A HQGG++ +EV+DDG GL+R RILAKA + L Sbjct: 264 NSIDHGIETPAERLAAGKPASGTVKLAASHQGGSVVVEVSDDGRGLSRPRILAKARERNL 323 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 V + MSD EV L+F PGFSTAE VT++SGRGVGMDVVKRNI MGG ++I S G GT Sbjct: 324 PVHDGMSDAEVWQLVFMPGFSTAETVTELSGRGVGMDVVKRNIGAMGGRIDIDSAPGMGT 383 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE-RVLEVRGEY 558 I I LPLTLAILDG+ V V +++PL ++ESLQ R D+ L G + ++ VRGEY Sbjct: 384 RIGIRLPLTLAILDGLIVAVEAVNYVIPLTYIVESLQARSDDVRGLGGEDNAMIRVRGEY 443 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP+ L ++ + G QGIVVIL+S GR +AL VD+L+GQ QVV+K+LE N+R+V Sbjct: 444 LPLFSLHELLRIGGEAPAPEQGIVVILESEGRSFALQVDELVGQQQVVIKSLEQNFRRVE 503 Query: 619 GISAATILGDGSVALIVDVSALQAINREQRMAN 651 GI+ ATI+GDGSVALI+DV AL + + A+ Sbjct: 504 GIAGATIMGDGSVALILDVDALPRLAAREDTAD 536 >UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 Tax=Bacteria RepID=A1VCL0_DESVV Length = 1089 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 199/657 (30%), Positives = 326/657 (49%), Gaps = 22/657 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F + + ++ L L +A E ++A++R +++ G ++ Sbjct: 432 AEDLDVFKATVAQQMDNIRVGLDELARDASQKEYVDALYRFLVTVQNSCAYMGAEDVRLY 491 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL-------DAYKQSQEPDAASFDY 118 L+D+AR ++ +++L + I+ + L + + ++ + Sbjct: 492 AERTAGLVDQARNADLDFGL-MVDLLRQETSIIGDMLGKEIARMEDCLNGGDAESEQGEA 550 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 A A + SA SV A+ P E+ + ++ + Sbjct: 551 PAAATVGTPSSAATTSASAPESGSV-AQGAPSSEKPAQKPEPVPAAPASQSAASSGAQAA 609 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 A + G A+ A A V+ Sbjct: 610 ASAPAGQAAAAASAKPAAPATSGTEAKPVAAATTPPKAAAASSAAPAKAVATPPRPAAPA 669 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 AA + S++IRV EK+D L+NL+GEL+I ++ + + L+ Sbjct: 670 PAAASAPAAAPAGGPPAGGNKASSTIRVDHEKLDHLMNLIGELIINRNRYSMLARHLEEG 729 Query: 299 NHG--------DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 +L + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+ Sbjct: 730 GASVNVAEVAQNLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKE 789 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V+L L G TELDKS++E I DPL HL+RNS+DHG+E E+R+A GK G + L A H+ Sbjct: 790 VDLVLEGEETELDKSVVEVIGDPLVHLIRNSVDHGVEPEEERIAKGKKPKGVVTLRAFHK 849 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTD 467 G ++ IE+ DDG G++ E++ A +G+ E M D E LIFAPGFS+AE++TD Sbjct: 850 GNSVAIEIEDDGKGIDPEKMREVAVRKGIVTPEEAKAMDDREAMELIFAPGFSSAEKITD 909 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVV+ NI+ + G V I S+ G GT + LPLTLAI+D + V VA +++ +P Sbjct: 910 ISGRGVGMDVVRTNIKNLKGSVSIHSEVGKGTRFTLSLPLTLAIIDALMVNVAGQMYAIP 969 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 L+AV E+ + L + G + V +RGE L IV+L ++ + + + VV++ Sbjct: 970 LDAVSETTKIEARRLTDVKGRKAV-TLRGEVLGIVDLSELLALPRSDAQ-DVLSVVVIHD 1027 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 RR L+VD+L+ + ++V+K L + + GIS ATI+GDGSV LI+D + + Sbjct: 1028 NDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILDPHEIYMMA 1084 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 1/171 (0%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F EA E L +E +LL L+ + LN IFR HS+KG +G G + + Sbjct: 6 MD-PEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRM 64 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H EN+LDE R+G M + ++I+++ L D +++ +D + S + + + + Sbjct: 65 NQLAHRAENILDELRKGAMVVTSEIMDVILAVTDALRQMIDNLESSGQEGDVAIESLITT 124 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + + + S VA EP + + ++ + A VD Sbjct: 125 IDAIMAGGGAVPAAPAAPASPVAPVEPVAAVTPAADEGAVMPDGIVATTVD 175 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 2/153 (1%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F DEA E+ + LL L+ + + ++N +FR H++KG +G GF L T Sbjct: 245 HLKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFRFFHNLKGNSGIIGFRELNGLT 304 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQALRQ 125 H E LL+ RRGEMQ + ++++L L D++ ++ + S + + L+Q Sbjct: 305 HEAETLLNNIRRGEMQSSAELVDLLLFVVDVIDALVNRIETASGMVHGFDISEVLEPLQQ 364 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 + P + ++ A S+P E + + Sbjct: 365 AVAGGEARLPVGIVGMAKQAASQPAAESTATTE 397 >UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Tax=Proteobacteria RepID=Q2BJR4_9GAMM Length = 815 Score = 528 bits (1361), Expect = e-148, Method: Composition-based stats. Identities = 228/567 (40%), Positives = 337/567 (59%), Gaps = 24/567 (4%) Query: 111 PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ-SRSQSPRRIILSRLKA 169 + I Q + A E+ +R +P + P + + Sbjct: 231 VEDECDLSIVQKEVEAEKPAVAESQQTDSREVREILFKPDASLLATGNEPSFLFQALADL 290 Query: 170 GEVDLLEEELG-HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ-------- 220 GE+++ + G D K S L D E++IT + +V + + Sbjct: 291 GELEIEVDSSGLPDLDQLDPEKLLLSWRFKLRSDCPEEEITEIFEWVEDECELTIQGASK 350 Query: 221 --ITFETVEVSPKISTPPVLK-------LAAEQAPTGRVEREKTTRSNESTSIRVAVEKV 271 E P S PV AA Q+ + K + ES+SIRV +K+ Sbjct: 351 VSTQPAETETQPVASEQPVEAASDKPATPAAVQSTSPAASPRKAKPAAESSSIRVETDKI 410 Query: 272 DQLINLVGELVITQSMLAQRSSELDPV----NHGDLITSMGQLQRNARDLQESVMSIRMM 327 D LIN VGELVITQ+ML Q EL + L + + QL+RN RDLQE VM +RM+ Sbjct: 411 DALINRVGELVITQAMLGQVGDELSDLVSGSEIERLQSGLEQLERNTRDLQEDVMRVRML 470 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ +VF+R+PRLV D++GKLGK+VEL + G TE+DK+++E+I DP+ HL+RNSLDHG+E Sbjct: 471 PISFVFNRFPRLVHDVSGKLGKKVELIITGEQTEIDKTVMEKIGDPMVHLIRNSLDHGLE 530 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MS 446 PE+R+AAGK G + L A HQGG I I++ DDG GLN E+I KA +GL ++ +S Sbjct: 531 SPEERVAAGKPETGKVQLDAYHQGGFIIIDIIDDGRGLNTEKIYQKALEKGLVTTDQNLS 590 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 D E+ LIF PGFSTAE V+D+SGRGVGMDVV+RNI+ +GGHV ++S+ G G+T + LP Sbjct: 591 DSEINELIFKPGFSTAEAVSDLSGRGVGMDVVRRNIESLGGHVRVKSEPGHGSTFTVSLP 650 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LTLAILDG +RV +E +I+PL +++E++ ++ L P+AG ++L R EY+P++ L Sbjct: 651 LTLAILDGQLIRVHNETYIVPLISIVETILADKSSLSPIAGENKLLHFRDEYIPLINLRS 710 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 +F + + + ++ I+++GG++ L+VD+L GQ QVV+K+LE N++++ G + ATIL Sbjct: 711 LFKLPMQEEQMESCLIAIVENGGQKVGLIVDELFGQQQVVIKSLEVNFKRIEGFAGATIL 770 Query: 627 GDGSVALIVDVSALQAINREQRMANTA 653 GDGSVALI+D++ L + A TA Sbjct: 771 GDGSVALILDIAGLMKRGLDHETARTA 797 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 83/305 (27%), Positives = 135/305 (44%), Gaps = 32/305 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F TF +E+ E L ME LL L ++ D E +N IFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDLSQFIGTFLEESYEGLEVMESSLLAL--DSADEETINTIFRAAHSIKGGAGTFGFS 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLDE R G+ ++ ++NL LE+ D ++ L+A + DA + + Sbjct: 59 EVADFTHVVETLLDEMRSGKQEVTPPLVNLLLESVDCIKMLLEATQDGPAADANQINQVQ 118 Query: 121 QALRQL--------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 + L++ A ET A +SV + S+ E P + A Sbjct: 119 ERLQKALDGDVSDNASSGGTETSVATAEVSVSSPSQLAWEIEFKPHPGLLQSGHEPAFMF 178 Query: 173 DLLEEELGHLTTLT-----------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ- 220 + L++ LG L + D + L + ++++I + +V + Sbjct: 179 EALQD-LGELNVVAKLKKVPDLSSLDPEQIFIKWQLNLISNCSKEEIEEIFEWVEDECDL 237 Query: 221 --ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLV 278 + E P ++ + + + NE + + L +L Sbjct: 238 SIVQKEVEAEKPAVAESQQTDSREVREILFKPDASLLATGNEPSFL------FQALADL- 290 Query: 279 GELVI 283 GEL I Sbjct: 291 GELEI 295 >UniRef50_B5W7Y8 CheA signal transduction histidine kinase n=2 Tax=Arthrospira RepID=B5W7Y8_SPIMA Length = 744 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 212/709 (29%), Positives = 337/709 (47%), Gaps = 85/709 (11%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQ----LNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 E +E LA + + LL L+ + LN +FR+ HSIKG + G ++ H ME Sbjct: 21 ECEEHLAVVRRELLALESCMNQPQIEGSILNELFRSFHSIKGLSAMVGVREAEKLAHQME 80 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA 130 + L R G+ L + + + I++ ++AY+ ++P + I L Sbjct: 81 SYLRSLRDGQTSLKPEGFDALMSGTQILERAIEAYRTKEDP--PDIEEIISQLEACNPPV 138 Query: 131 KGETP-SAVTRLSVVAKSE---------------------PQDEQSRSQSPRRIILSRLK 168 +TP +A+T V K E P E S+ I +L+ Sbjct: 139 VAKTPNAAITPFEVKLKPEEMKRLEALVGEGKPIWHFVFTPSTELSKQGIGVNAIREQLQ 198 Query: 169 AG---------------------------EVDLLEEELGHLTTLTDVVKGA-------DS 194 A E L EL +L+ + + S Sbjct: 199 AIGELIYVSPRLNANQKILFDFIVATEGPENHNLGSELKYLSWEPYHIPSSVSATSIRSS 258 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 S + P E TA +EA + + P+ K AE P E E Sbjct: 259 NSEVEPSRGPEAPATATAPEEVEAIAVVSSSQSEEPERKESESGKETAEAEPLEISEPET 318 Query: 255 TTRSNESTS----------IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + S +RV + K+D+L+ +VGELVIT++ L + L P Sbjct: 319 SNAISPTKSTSPLISGSNLVRVDLPKLDELMRMVGELVITRARLEENLKNLPPTVPAARR 378 Query: 305 TSMGQ----LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 ++ + L+R RDL++ VM +R++P+ +F+R +VRDL GKQV L + G+ T Sbjct: 379 RTLQEINLTLERQLRDLRQGVMQVRLVPIAEIFARMQFVVRDLMRLTGKQVALEISGAET 438 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK ++ER++DPL HLVRN++ HGIE E+RL AGK++ G + L A G + IE+ D Sbjct: 439 EIDKFVVERMMDPLLHLVRNAVSHGIESTEERLKAGKSATGAIALRASAAGEMVIIEIED 498 Query: 421 DGAGLNRERILAKAASQGLTV--------SENMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 DG G++ R+L +A QGL +N + L+ +PGFST E+ SGRG Sbjct: 499 DGQGVDISRVLKRAKQQGLLSDSVSETNDPDNYDSQTILDLLCSPGFSTKEEADLASGRG 558 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGM +VK +Q++GG V+ +++G G+ I LPLTLAI D + V V+ + F +P +++ Sbjct: 559 VGMAIVKNTVQELGGCVKFTTQKGKGSHFIIDLPLTLAITDALIVEVSGQTFAIPESSIQ 618 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E L + L G+ ++ RG P+ L ++FN A + + VV++ + Sbjct: 619 EVLSIENERIICLE-GQEIISYRGHVFPLRYLARLFNCAVTTDNSEKLTVVVIGNSLNST 677 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 L+V++++G ++VV+ L + PGIS AT LGDG V LI+DV AL Sbjct: 678 GLVVNRILGLREIVVRPLTDPLLQSPGISGATELGDGRVVLIMDVPALI 726 >UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vulgaris RepID=Q72AN2_DESVH Length = 697 Score = 528 bits (1360), Expect = e-148, Method: Composition-based stats. Identities = 214/697 (30%), Positives = 329/697 (47%), Gaps = 64/697 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +D + F DEA ELL DME L L+ D + +FR H++KG FG++ Sbjct: 1 MIDRPAVMRLFGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKGSGAMFGYTE 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD--------AYKQSQEP-- 111 H +E++ D R G + L ++++ L LE KD +Q L+ A +++ + Sbjct: 61 AARVAHALEDVFDRVRHGRLPLTSELLGLCLEAKDHLQTLLEGDPADVPVAVREASDALM 120 Query: 112 --------DAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSE---------PQDEQS 154 D A D QA+ G ++E D Sbjct: 121 LRIAAFEHDEADVDD-GQAVHAAKPYDTGVPEHMTISGDATGEAEVCLWVRLTPADDWMW 179 Query: 155 RSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF 214 R P R++ S G +++ V +L G ++ D + + Sbjct: 180 RGLDPLRLLDSFRGYGPFEVVPVFADGGLEHVGEVPFPVRWEGVLTGRVSADVLRQDYAW 239 Query: 215 VIEADQITFETVEVSPKISTPPVLKLAA----------EQAPTGRVEREKTTRSNESTS- 263 +++++ ++ ++ L AA A +ERE + S Sbjct: 240 LLDSENLSIMSLGKRSDCPPVRALLSAAVGGRVNDPLALMAAARAMEREDICNCMDVQSV 299 Query: 264 --------------IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ 309 IRV K+D+L+ VGELVI QS L+Q + ++ Sbjct: 300 ASEVAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLVRGVPDDAMREVAEG--- 356 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 L+R A L++S MS+RM+PM F + RLVRDLA +LGK+V G TELDK+LI++ Sbjct: 357 LERLAGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTELDKTLIDQ 416 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 + DPL HL+RN++DHGIE PE RLA GK G + L A H GG + I V+DDGAG++ E+ Sbjct: 417 LRDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDGAGVDLEK 476 Query: 430 ILAKAASQGLTVSENMSDDE-VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 + +A + GL E D + L++ PGF+TA V+++SGRGVGMDVV I + G Sbjct: 477 VRLRAVAMGLIPPETEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVHSAIAALRGS 536 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL-QPREADLHPLAG 547 +++++ G GTT I LPLTLAI+DGM V V + +I+PL V L + + + + Sbjct: 537 LDMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMVEACLERFVDGAVRTVE- 595 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 +E RG +P V L + V G + + V++ G VD ++G Q V+ Sbjct: 596 ---CIEYRGRLIPCVSLRLLLGVPGEQPGYER--VIVAGKEGHEVGFAVDAVVGLQQAVI 650 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 K + + R V IS T+ DG ++LI+DV L Sbjct: 651 KGVGNLCRNVAWISGTTVDADGGISLILDVVQLIRFA 687 >UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYF4_9GAMM Length = 664 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 202/670 (30%), Positives = 335/670 (50%), Gaps = 30/670 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD D + + EA ELL + L L+ L ++FRA H++KGGAG Sbjct: 1 MSMD-PDILRDYVSEARELLEQAQSDALALECAPDSDAVLASLFRAFHTLKGGAGFLDAD 59 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L E TH +E+LLD+ R + + I++ L+ D++Q LD + P+ D Sbjct: 60 ALVEWTHHLEDLLDKLRSHVLPVTPTTIDVILKGLDVIQCMLDELGRGVYPNPGPSDLGQ 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA-GEVDLLEEEL 179 + ++E +P +V +E ++S +LK G+V + E + Sbjct: 120 RICALASVEDVHTSPPESASENVRPIAEQPTGVESAESGTLQAWQKLKPDGKVGVYVERV 179 Query: 180 ------GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF----VIEADQITFETVEVS 229 G + + G D+ S + + E + A+ V+ + +V+ Sbjct: 180 SEGKDKGAVCVESASKAGDDAASDTISDEEFEQVLDALYGHKAPGVVPPAERRVMDSQVA 239 Query: 230 PKISTPPVLKLAAEQAP-----TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 P L A AP + ER +T +++RV ++D ++N VGELV+ Sbjct: 240 STAVLPGALPQATAPAPVTSVAAVKTERPSSTSETPESTLRVESARLDSVMNQVGELVLL 299 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 ++ + + H DL ++ D+Q +VM +RM P + +F + PR+VRD++ Sbjct: 300 RNRFLS-AMQTTIGEHEDLARIAREMDLTVNDMQSTVMRLRMQPCKRLFQQLPRVVRDVS 358 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 +LGK+V L VG E+DK +++ + PL HLVRNSLDHGIE P R+ GKN + L Sbjct: 359 RQLGKRVNLQFVGEDVEIDKKVVDALSAPLIHLVRNSLDHGIETPADRVMLGKNEIATLR 418 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFST 461 +SA H G + IEV+DDG G++ +++ KA +GL E +++ + LIF PGFST Sbjct: 419 ISAVHLGDKVRIEVSDDGNGIDAQQVKQKAVEKGLIGQEEAARLTESDAIDLIFRPGFST 478 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 + VT+ SGRGVGMDVVK+ Q + G +++ + GTGTTI + PLTLA+L + +R+ Sbjct: 479 NDVVTEYSGRGVGMDVVKKTTQSLRGRLDVHTNLGTGTTIAMEFPLTLAVLPVLYLRLRR 538 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK--TEATQ 579 +V+ +P+++V + L+ + G + +P V+L ++ + + TE T Sbjct: 539 DVYAIPISSVSSLIDVDPQRLYQVQGRALYQAGPEQIVPFVDLGEILHQRPIQLGTEPTD 598 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 GI+ R L+V +++G VVK ++ + AT+ G G V LI+D++ Sbjct: 599 GIL------TERGLLVVSEVLGNEDSVVKPID-FLSESHWYQGATLSGKGEVVLILDIAN 651 Query: 640 LQAINREQRM 649 L+ E + Sbjct: 652 LKHSQAEPKR 661 >UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIR9_9RHOB Length = 650 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 222/637 (34%), Positives = 340/637 (53%), Gaps = 8/637 (1%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 QT+F+E ++LL + L L A DAE ++A+FRA HSIKGGAG F + + E +H Sbjct: 5 IRQTYFEECEDLLESLADGLAALAAGAADAETVHALFRAVHSIKGGAGAFKLAAVAEFSH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E +LD R ++ + ++ L D + + + A A + + L L Sbjct: 65 TFETVLDRLRADALEPSAPLVALLQRAADHLADLVAAA--RAGAPAPARPALHDELAALL 122 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 P + V P+ +S +P + + E L + L L L Sbjct: 123 GTHADAPPDELAFEPVALDLSPERPRSVRFTPTPALFAN--GHEPLHLFDALAGLAPLD- 179 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 ++ S A L D++ L I P Sbjct: 180 -IEADTSALAPLAAGWEAPDVSWTLETTAPEPAIRDVFAFTEGLCRLDIAEPPEPGPPPP 238 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 ++RV +++VD+++N+VGEL+I Q++L+QR +L L + Sbjct: 239 AAEAPLPPAPPPPRPTLRVDLDRVDRMMNVVGELIINQAVLSQRIDDLGLSAGASLSGDL 298 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 + ARDLQE VM+IR P++ +FSR R+VR+ A GK V L G+ TE+DK+++ Sbjct: 299 EDYRALARDLQEGVMAIRAQPVKPLFSRMSRIVREAATATGKDVRLVTEGAETEIDKTVV 358 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 + + DPLTH++RN++DHGIE PE+R+A GK G L L+A H+ G I +E+ DDGAGL+R Sbjct: 359 DSLADPLTHMIRNAIDHGIEPPERRVALGKPPAGTLRLTAAHRAGAILLEIADDGAGLDR 418 Query: 428 ERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 RI A A ++GL E +++D E+ L+F PGFST+ ++ +SGRGVGMDVVK I +G Sbjct: 419 PRIRAAAEARGLVSPEADLTDAEIDNLLFLPGFSTSSVISSLSGRGVGMDVVKTAIAALG 478 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G V I ++ G GTT I LPLTLA+LDGM V +A + ++P+ + E+++ ADLH L Sbjct: 479 GRVSIATRPGAGTTFSITLPLTLAVLDGMIVTIAGQTMVVPIATINETVRAAPADLHKLG 538 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR-RYALLVDQLIGQHQV 605 R+L +RG ++P+V+ + + A + ++++ S R AL V+++ Q QV Sbjct: 539 ADGRLLRLRGRHVPVVDAAAALGLPPPRAPAEEVMLLLCDSEARGLCALAVERIWEQRQV 598 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V+K+L VPG+SAATILGDG +A I+D AL A Sbjct: 599 VIKSLTGTCGHVPGLSAATILGDGRIAFILDPEALVA 635 >UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 Tax=Shewanella RepID=Q0HIF1_SHESM Length = 736 Score = 527 bits (1358), Expect = e-148, Method: Composition-based stats. Identities = 224/482 (46%), Positives = 309/482 (64%), Gaps = 5/482 (1%) Query: 160 RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEAD 219 + A E+D L + D + D + + ++A+ Sbjct: 255 FESLTPETFASEIDALTSASAKANPMKDAISPLDVQTESSISKPTRAKKQSKEAKPLQAN 314 Query: 220 QITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG 279 T S A+ P +K + +++ ++RV K+D L+NL G Sbjct: 315 TSTNAETTQLLSSSAAISAAPASSNQPAA----KKASAASQDATLRVETSKIDTLVNLAG 370 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 ELVITQSML +EL L T++ +L+RN R++QE+VMS+RM+P+ +VF+R+ RL Sbjct: 371 ELVITQSMLTLIGNELGGELGERLKTALNELERNTREMQEAVMSVRMLPVSFVFNRFHRL 430 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VRDL+ +LGK V L + G +TE+DK +IE+++DPLTHLVRNSLDHGIE PEKRLAAGK Sbjct: 431 VRDLSDQLGKNVSLVIEGGNTEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEKRLAAGKTE 490 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGF 459 G L L A +GG+I I V DDG GLNRERIL KA G+ + ENM+D +V LIFA GF Sbjct: 491 AGVLSLKASQRGGSIVIAVHDDGGGLNRERILQKARENGMALPENMTDKQVWQLIFAAGF 550 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STA +VTDVSGRGVGMDVV++NI+ +GG ++I S G G T I LPLTLAI+DGMSV V Sbjct: 551 STAAEVTDVSGRGVGMDVVRKNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSV 610 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 ++++ILPL ++ES+QP+ L LA ER+L VR EYLP++ L+++ + Sbjct: 611 GNQIYILPLVHIIESIQPQTEQLKFLA-KERLLRVREEYLPLLNLYQLMEIEPQAKTPEA 669 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 GIVV+L+S +R+ L VD L+GQ QVV+K+LE +YR++PG+S ATI+GDGSVALI+DV + Sbjct: 670 GIVVLLESNNKRFGLCVDALVGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVES 729 Query: 640 LQ 641 L Sbjct: 730 LA 731 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 74/242 (30%), Positives = 122/242 (50%), Gaps = 3/242 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++++F+Q FF+E+ E L +MEQ LL L +APD E+LN IFRAAHSIKGG+G FGF+ Sbjct: 1 MSINMAEFHQVFFEESHEHLENMEQLLLALDLDAPDPEELNTIFRAAHSIKGGSGIFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+MENLLD+ R+G +L++ +I+L L T D + L+ Y++ + D ++ Sbjct: 61 ALTSVTHVMENLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYREEEPIDWQQVEFAK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD---LLEE 177 L + T +A V A + + Q+ + + + S + VD E Sbjct: 121 NQLVAVLNGETFSTQTANAANGVSAANPNTNNQTEDKPLQAAVTSSVATQSVDDSFGFFE 180 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + L + + A +I +DI A V++ V + ++ Sbjct: 181 DEVELGLVDETEHFGFFDEAYTAKEIRAEDINAKPSAVLKTSTNEHIAVNKAAPVNEDSA 240 Query: 238 LK 239 + Sbjct: 241 VN 242 >UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MR50_9FIRM Length = 705 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 201/698 (28%), Positives = 335/698 (47%), Gaps = 62/698 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQP-EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + + + E + LL +++ LL + E +N IFR H+IKG + GF LQ Sbjct: 8 MESMLEMYIFETNTLLEQLDEILLRTEDANVFSQEDINEIFRIMHTIKGSSAMMGFENLQ 67 Query: 64 ETTHLMENLLDEARRGEMQLNTDII--NLFLETKDIMQEQLDAYKQSQEPDAASFDY--- 118 H E++ R L E D+ + +++ + S + D D+ Sbjct: 68 HLAHKGEDMFFVIREKPEIAKDAHFVYELIFEVSDLYKAEIEYIQNSGDDDYTPTDFSET 127 Query: 119 ---ICQALRQL-ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL---SRLKAGE 171 + A +L A+E+ + A + P R+ +++ Sbjct: 128 FKKLEDATERLKAMESGAAPAESAPAAKQEASAAPAGSNVEGSMTVRVFFEDGCKMENLR 187 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE---- 227 LL ++ + + +A DI E+ + + +E Sbjct: 188 AFLLLTKIKDVAEVISCTPPDVESNADTAKDIVENGFLVTFKGFDGDNDTVIKAIEGAVN 247 Query: 228 -------------VSPKISTPPVLKLAAEQAPTGRVER---------------------- 252 + + P +K AA A + E Sbjct: 248 VESYEIIDTPSAAPAEEKPAPAPVKEAAPVAAPAKTEEKPQAQPAPAKPAAKSAVTKAQE 307 Query: 253 --EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 +K + + I V + K+D L ++VGE++ T+SM+ + +L+ + + QL Sbjct: 308 DIKKANGGQKQSLISVNLSKLDTLHDIVGEIITTESMVI-ANPDLEGLELESFSKAARQL 366 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 ++ +LQ++VMSIRM+P+ VF + R+VRD+ KL K+ EL L G +TE+DKS+++ + Sbjct: 367 RKLTDELQDTVMSIRMVPLAGVFQKMGRIVRDMKIKLNKEAELVLEGETTEVDKSIVDNL 426 Query: 371 IDPLTHLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 DPL HLVRN +DHGIE R+A GK G + LSA+H G + I V+DDGAG+N E+ Sbjct: 427 NDPLMHLVRNCMDHGIEDDINVRIAEGKPEKGTVKLSAKHSAGEVIITVSDDGAGINCEK 486 Query: 430 ILAKAASQGLTV--SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 +L KA GL + E+ +I PGFST + VT+ SGRGVGMDVV+ NI++ GG Sbjct: 487 VLEKAKENGLLTKPESEYTTKEIQNMILLPGFSTNDTVTEYSGRGVGMDVVRSNIEQCGG 546 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 + ++S++G G++ I +PLTLAI++GM ++V +F +P++++ ESL L Sbjct: 547 TLTVESEEGKGSSFIIRIPLTLAIVEGMKLKVGSTIFTVPISSIKESLMVANNQLLNDTK 606 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 ++ +RG PI+ L + FN+ T+ GI++++ GG+ L D+LIG+ VVV Sbjct: 607 QGEMIMIRGVCYPILRLHEKFNMPTEVTKLEDGILLLVDVGGKNVCLFADKLIGEQPVVV 666 Query: 608 KNLESNYR----KVPGISAATILGDGSVALIVDVSALQ 641 K K G+S T++GDG+++LI+DV+ L Sbjct: 667 KPFPKYLSQYNIKAEGLSGCTVMGDGTISLIIDVNNLI 704 >UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD11_9GAMM Length = 764 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 228/759 (30%), Positives = 361/759 (47%), Gaps = 114/759 (15%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M + F EA+ELL +ME LL L+ + + E +N++FRA H+IKG AG F F+ + Sbjct: 1 MSEESVHHIFQTEAEELLVEMEDALLALEDDPTNQELVNSLFRAMHTIKGAAGVFNFNHI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH +E +D R+G+ +++++I L+ KD +++ D + + + + Sbjct: 61 TEFTHPVETEVDLIRQGQRTVDSNLIATLLKIKDHTWALVESAVDG---DGSLSNALYET 117 Query: 123 LRQLALEAKGETPSAVTRLSVVAKS--------------------------------EPQ 150 L E +GE A + A S EP Sbjct: 118 GEALLQELQGERSVAPAAKANTATSSVERAPESSTSNGHSRANPIEEMFAHDFHDDDEPP 177 Query: 151 DEQSRSQSPRRIILSRLKAG------EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIA 204 + R S + I +A + L +L + D+V + ++ D Sbjct: 178 ESDGRMDSDQWFISLDFQADALRNGLDPASFISYLSNLGDINDIVTLTHRVPSLEKADFE 237 Query: 205 EDDITAVLCFVIEADQITFETV-EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS 263 + + FV +A + E V E + T +L ++ A + + E S Sbjct: 238 SCYLGFRIAFVSQASKADIEAVFEFALDDCTVSILPPHSKVATYLKQIEDLP----ELES 293 Query: 264 IR----------VAVEKVDQLINL--------------VGELVITQSMLAQ--------- 290 +R V ++++ +NL +GEL++ Q ++ Q Sbjct: 294 LRLGDILLSIGAVTKAELERALNLQSSDENGATEERKKIGELLVEQKVIEQPVIERALKK 353 Query: 291 --------RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF--------- 333 ++ +D G LI +G+L ++ ++ V M + V Sbjct: 354 QQKSREQSQTIRVDSNKLGQLINLVGELVTSSAAMKIVVERYHMRDADEVVAGMEHLVEE 413 Query: 334 -----------------SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 SR+ R+ RD++ +LGK+++L + G +ELDK+++E+I DPLTH Sbjct: 414 IRDHALQLRMVQIGDTFSRFRRVTRDVSNELGKKIDLVISGGESELDKTVVEKINDPLTH 473 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRN+LDHGIELP +RLAAGK G + L+A H G+I IEV DDG GL+ E+I AKA Sbjct: 474 LVRNALDHGIELPSERLAAGKPEAGTITLNAFHDSGHIVIEVIDDGRGLDPEKIQAKAEK 533 Query: 437 QGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 GL +S E+ L+F PG ST EQ +++SGRGVGMDVV+RNI+ + G VE+ S Sbjct: 534 VGLIEPGVTLSRAEIFRLVFEPGLSTKEQASNLSGRGVGMDVVRRNIEALRGSVELDSNV 593 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G GT I I LPLTLAI+DG V E +++PL+ V E ++ D + G + +R Sbjct: 594 GKGTHITINLPLTLAIIDGFMVGAGHERYVIPLSMVEECVEFNNGDWYEEKGQSNFINLR 653 Query: 556 GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 GE +P V L F V + + +V+++ G + +VDQL G+ Q V+K L ++ Sbjct: 654 GEVMPFVRLRTFFQVPQRQQRQHRESLVVVRMGRHKAGFVVDQLFGEQQTVIKPLGDIFQ 713 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + G+S ATILG G +ALI+DV L + Q ++ A Sbjct: 714 HLKGVSGATILGTGDIALILDVQGLLTLAGNQHAHHSQA 752 >UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile RepID=C9XKI0_CLODC Length = 710 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 199/703 (28%), Positives = 345/703 (49%), Gaps = 66/703 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + F E LL +++ ++ ++ E +N FR H+IKG A G + Sbjct: 11 MRQMLDMFIFETSLLLEQLDEIMIQIEKEKVFTHNNINETFRIMHTIKGSASMMGLDNIS 70 Query: 64 ETTHLMENLLDEARRGEMQL--NTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 H +E+L R G++++ N + +L ++ D ++ +D QS+ ++ + + Sbjct: 71 ALAHSVEDLFYAIREGKIEVLDNDLLFDLVFQSLDFIRRDIDEL-QSRGCISSDYSNFIE 129 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + + + + S ++ + +S + E S + +K E Sbjct: 130 GIEEYVSTLELSS-SMKSKDNANLESTDEKEAIDSNFEYKEDSDVVKIIFEQGCMMENVR 188 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAV--------LCFVIEADQ------------- 220 L ++ P D+ + + + FV + D+ Sbjct: 189 AFMLVFELRDYCEFIDFYPKDVETNAESTEYIKSYGFYIQFVAKEDKAIVYKTIEDNLYV 248 Query: 221 ------------------------ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 + +VS E + + EK + Sbjct: 249 KEYINISKKEIEMKNTSNNDAVENKLKDNNKVSKSYQNNYTEDEIQEDVLNEKTDMEKDS 308 Query: 257 RSNESTSI--------RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG 308 S E+ + V +EK+D L N+VGE+VI +SM+ S V+ + + Sbjct: 309 LSEENEHLPISKQSIMSVNLEKLDLLQNIVGEIVIMESMVV-NSVNSTGVDIDNFNKATR 367 Query: 309 QLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368 QL + +LQ+ VMS+RM+ + VF + R+VRD+ KL K VEL +G+ TE+DK++I+ Sbjct: 368 QLHKLTDELQDIVMSMRMIQIAGVFQKMHRIVRDMNKKLDKNVELITIGAETEVDKNVID 427 Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428 + +P HL+RN++DH IE E+R+A GK VG ++LSAE+ GG I ++DDG G+ R+ Sbjct: 428 NLAEPFMHLIRNAMDHAIEPIEERIAKGKEEVGKIVLSAENLGGEAVISISDDGRGIMRD 487 Query: 429 RILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 +ILAKA QGL + +DDEV LI PGFST E +T+ SGRGVGMD+V+++I+K+G Sbjct: 488 KILAKAKEQGLLKHQINEYTDDEVNSLIMTPGFSTKESITEFSGRGVGMDIVRKSIEKVG 547 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE-ADLHPL 545 G +E++SKQ GTT I +PLTL+I++GM +V D +F LP++++ + + + + Sbjct: 548 GSIEVKSKQDEGTTFTIKIPLTLSIVEGMKFKVGDSLFTLPISSIRRTFKLTDLNQIITE 607 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 ++ + G +PI+ L K++N+ T G ++I+++ + + VD++IG QV Sbjct: 608 GNKTELITIYGACIPIIRLHKIYNIQTKVTNLMHGNMIIIENEHKAVCIFVDEIIGNQQV 667 Query: 606 VVKNLESNYRKV----PGISAATILGDGSVALIVDVSALQAIN 644 VVK + + G+S TILGDGS++LI+D ++ I Sbjct: 668 VVKPFPVYFNRFNIKNKGLSGCTILGDGSISLIIDADSIIEIY 710 >UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMS0_9DELT Length = 925 Score = 524 bits (1350), Expect = e-147, Method: Composition-based stats. Identities = 200/650 (30%), Positives = 329/650 (50%), Gaps = 73/650 (11%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 Q F D+ ++M+ L L+ E D E ++ ++R+ +++ G GF L+ Sbjct: 341 QDLQIFRQTVDQQFSNMKHALDKLEKEGTDKELVDGLYRSLVTVQNSTGYMGFEELKNYA 400 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 NL+D+ R+ + + + + + DI++ ++ + Sbjct: 401 SNTANLVDQGRKTDTDFSL-MHGILKQEVDILESMINRHLSG------------------ 441 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 S V L EP E S + Sbjct: 442 -------LSSTVQDLPAQPSPEPDRETSAEK----------------------------- 465 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 S ++ + D E+ I Q + K A + A Sbjct: 466 ------PSEASRVSSDPQEEAEPFAPAMDIPEQQQAQAASQAGESAEPSGAGKSADQGAG 519 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH-----G 301 + E + ++ + +++IRV K+D+L+NL+GEL+I ++ A S L+ Sbjct: 520 S---EPQAKSQGSTTSTIRVDHGKLDELMNLIGELIINRNRFAMLSRSLEEGQDVMEVAQ 576 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + + R + DLQ ++M++RM+P+ VF+++PRLVRDL+ K K ++L G TE Sbjct: 577 QLNETTNSMARISDDLQVTIMNVRMVPVRSVFTKFPRLVRDLSRKNNKNIQLITEGEETE 636 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDKS++E I DPL HL+RN++DHG+ELP++R GK G + L A H+G ++ IE+ DD Sbjct: 637 LDKSVVELIGDPLVHLIRNAVDHGLELPQERKDRGKEEKGTVWLRAAHKGNSVVIEIEDD 696 Query: 422 GAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 G G++ E++ AKA +G+ E M +D+ LIFAPGFSTAE +TDVSGRGVGMDVV Sbjct: 697 GKGIDPEKMKAKAVEKGIIDREEARNMEEDQAVDLIFAPGFSTAETITDVSGRGVGMDVV 756 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 K NI+ + G++ + S G GT I LPLTLAI+D + V+V +V+ +PL+AV E+ + + Sbjct: 757 KNNIKSLKGNISVTSAVGQGTRFSIALPLTLAIIDALMVKVNGQVYAIPLDAVSETTKIQ 816 Query: 539 EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 L+ + +V+ +RGE L I +L ++ + + + + +VI++ G RR +V+ Sbjct: 817 AGRLNEI-NNRKVITLRGEVLGISDLAELLELPVDQADRDELPLVIIKVGDRRMGFIVED 875 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 L+ + +VV+K+L PGIS ATI+GDGSV LI+D + + I + Sbjct: 876 LLERQEVVIKSLGEYLGDQPGISGATIMGDGSVVLILDPNEIYRIATSRS 925 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 65/283 (22%), Positives = 111/283 (39%), Gaps = 17/283 (6%) Query: 1 MSMDI--SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + Y F EA E L +E LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPEVYSDFVVEAREHLETIEPKLLELENNPGNLSLLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + H EN+LDE R+G +Q N+ I++L LE D ++ +D + + + Sbjct: 61 LKDMNALAHKGENILDELRQGRIQANSSIMDLILEATDALRTMVDNLESMGHEGSLEVGH 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I + + ++ + S E Q E+ P L +D L + Sbjct: 121 IIEHIDEILKNKDEQASSGAPA------QEVQKEEQDFSHPAAEQNYLLNMVSLDHLSDF 174 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + + ++L+AI + + I F ++ + I L Sbjct: 175 I---------EEAQENLTAINSLLLEMEKGEGSSQDRINDLFRNFHNLKGNSGIIGYIEL 225 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL 281 A + T + + ++ V +E VD L +L+G + Sbjct: 226 NALAHEVETFLNTIRSGEQVLDPEAVDVLLETVDVLESLLGNI 268 >UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHP2_CALS8 Length = 650 Score = 523 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 198/651 (30%), Positives = 333/651 (51%), Gaps = 30/651 (4%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLN-AIFRAAHSIKGGAGTFGFSVLQETT 66 ++ F E+ +LL D+E + L+ + +N I R H++KG + +S + + Sbjct: 9 LFEIFIAESKQLLNDLENIFICLKERKLILKNVNNDIMRIFHTLKGSSAAMKYSDISQVC 68 Query: 67 HLMENLLDEARRGEMQLN--TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E+L + + N +IN FL+ D + +D+ + + + + + L Sbjct: 69 HKAEDLFVKLNSIHITPNIVDQLINCFLKVIDCLNLDIDSIETTDFSASRTAQKLIDQL- 127 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + ++ + D +++ RI + ++ + G + Sbjct: 128 -------------IENINENQNTASVDNIEKTKKKYRIKVFFEDGAGMENVRA-YGVIWK 173 Query: 185 LTDVVKGADSLSAILPGDIAEDD------ITAVLCFVIEADQ--ITFETVEVSPKISTPP 236 L DV D + D D V+ V+E D+ F+ V I Sbjct: 174 LKDVGDIIDYTPKNIQNDPNTADVIQKKGFELVIETVLEKDEVFQLFDDVLYLSNIEIEF 233 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 ++ E+ + + I V VEKVD++I+L+GEL+I S L L Sbjct: 234 ADNMSNEEFSQNGSKLGGGNTNLGQKIINVNVEKVDKIIDLIGELLINFSGLVLSVESL- 292 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 + D S ++ R +LQE MS+RM+ + F R R+ +++ KL K+V + + Sbjct: 293 GIASEDFKKSYSKVSRVINELQEIAMSMRMVSLSNTFQRLRRVALEVSEKLHKKVTVYVT 352 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TELD+ +IE I DPL HLVRN++DHGIE P++R GK GNL + A+ + I Sbjct: 353 GEETELDRMMIEHITDPLIHLVRNAIDHGIETPDERRKQGKAEEGNLYIHAKSTNSEVLI 412 Query: 417 EVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 + DDG G++RE+IL KA +G+ S N++D+++ LIF PGFST ++ T+ SGRGVG+ Sbjct: 413 TIQDDGRGIDREKILEKALEKGIIKSKNNLTDEDIYSLIFMPGFSTKDEATEYSGRGVGL 472 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 D+VK NI+++GG + + S++G GT+ + +PLTLAI+DGM V + + F++P+ +++E + Sbjct: 473 DIVKNNIERIGGKILVTSEKGRGTSFTLKIPLTLAIIDGMLVELNSKKFVIPITSMVEII 532 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKV-FNVAGAKTEATQGIVVILQSGGRRYAL 594 + + L G++ + +R E P+V+L K+ F T I V+++ G++ L Sbjct: 533 RLDTDKII-LEAGKKFILLREECYPLVDLKKIFFGKETEFNSNTFNIGVMIEENGKKAVL 591 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 LVD LI Q Q+V+K L R +S T+LGDGS+ALI+D+S L R Sbjct: 592 LVDNLISQQQIVIKPLPLLLRNAQVVSGCTLLGDGSIALILDISGLFEHIR 642 >UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related kinases n=2 Tax=Desulfovibrionaceae RepID=Q1MP79_LAWIP Length = 737 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 201/645 (31%), Positives = 331/645 (51%), Gaps = 64/645 (9%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F + + + L L ++ E ++A++R+ SI+ AG G+ L+ Sbjct: 137 AFAVTVKQQQSTIHAALEALAQDSSQREYIDALYRSLISIQNAAGVMGYDELKVYAERTA 196 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA 130 L+ + R + + ++++ + I+ + + S I Q +++ Sbjct: 197 GLVAQGRDSGIDFSL-MLDILTQEVAIVDDMIAVILAGDGITQLSSSPIEQ--KEVLSSQ 253 Query: 131 KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK 190 G T V+ VV+ +S S S Sbjct: 254 DGNTTDTVSSTPVVSAEHLTSLKSSSLS-------------------------------- 281 Query: 191 GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV 250 ++ + V +T+ PK PP +K + + Sbjct: 282 -------------TQESPGQIESHVPSKPGPVLKTISNVPKNIKPPSVKSSQAKPANA-- 326 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG--------D 302 + T+ S++IRV EK+D L+NL+GEL+I ++ + L+ D Sbjct: 327 -NDATSEQKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEEQGTNADVVEVAQD 385 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L + + R + +LQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L L G TEL Sbjct: 386 LSETTYAMARISDELQDTIMKVRMVPVASVFSRFPRLVRDLSRKSGKEVDLVLEGEETEL 445 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DKS++E I DPL HL+RN++DHGIE +R+A GK++ G + L A H+G ++ IE+ DDG Sbjct: 446 DKSVVEVIGDPLVHLIRNAVDHGIEPESERIAQGKSTKGKVTLRAYHKGNSVAIEIEDDG 505 Query: 423 AGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 GL+ +++ A +G+ +E + D E LIFAPGFS+AE++TD+SGRGVGMDVV+ Sbjct: 506 KGLDPDKLREVAIKKGILSAEEAKLLDDREAMELIFAPGFSSAEKITDISGRGVGMDVVR 565 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 NI+ + G + I S+ G GT + LPLTLAI+D + V VA EVF +PL+AV E+ + Sbjct: 566 TNIKNLKGSISIFSEIGKGTRFTLSLPLTLAIIDALMVNVAGEVFAIPLDAVSETTKLEA 625 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + L+ + G + + +RGE L ++EL ++ N+ + VVI+ S RR L+V++L Sbjct: 626 SKLNDI-NGRKAVTLRGEVLGLIELSELLNLPQEEH-TDVLSVVIIHSNERRLGLVVNKL 683 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 + + ++V+K L S +P IS ATI+GDG V LI+D + ++ Sbjct: 684 LERQEIVIKPLGSYLGDIPCISGATIMGDGGVILILDPHEIYLLS 728 Score = 46.3 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 1/89 (1%) Query: 50 IKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ 109 +KG +G GF L TH E LL+ R GEM ++I+L L D++ ++ + S Sbjct: 1 MKGNSGIIGFHELNSLTHEAETLLNRVRHGEMVATHELIDLLLLVVDVIDSLVERIESST 60 Query: 110 E-PDAASFDYICQALRQLALEAKGETPSA 137 I L+ P A Sbjct: 61 GIVQPFDISEILVCLQSAVAGKDITLPKA 89 >UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKK5_ANATD Length = 633 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 198/648 (30%), Positives = 339/648 (52%), Gaps = 39/648 (6%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVLQETT 66 ++ F EA E+++ +E+ + L+ + + + R H++KG + GF + + Sbjct: 9 MFEVFISEAKEIVSSLERIFIELKEGNRNLDIAVAEALRFFHTLKGSSAMMGFDDISKIC 68 Query: 67 HLMENLLDEARR-GEMQLNTDIINL-FLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E++ R G++ N D L L+ D + Q++ + SQ+P A + I + L Sbjct: 69 HRVEDIFVCMRDEGKLPTNLDNFILNMLKLIDFLTIQINCIENSQQPQDA--ENIKEVLE 126 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 ++ + +E Q+ S+ I L + E++ L L Sbjct: 127 KIE----------------TSLAENNRVQAESEKKYHIRLLFEEGWEMENLRAFL----- 165 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + +K ++ LP DI + ++ ++ + + Sbjct: 166 IVQNLKQYVNVLEYLPSDIESNMASSEKIKKDGFFISIKTLLKKEDVVKLFENFAWVKDI 225 Query: 245 APTGRVEREKTTRSNES---------TSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 E+ T+ S I V +EKVD+LI+L+GE+VIT SM+ Q E+ Sbjct: 226 KIEEVSEKASLTKEISSYQNVTHSIHKLINVNIEKVDRLIDLIGEVVITFSMIVQH-KEV 284 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 + Q+ + R+LQE VMS+RM+P+ F R R + +++ KL K V + + Sbjct: 285 KTDENSSFKNLTLQMSKLIRELQEVVMSMRMLPLSSTFQRLKRTIIEMSAKLQKPVNVHI 344 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TELDK LIE + DPL HLVRN++DHGIE E+RL GK+ GN+ +SA++ G + Sbjct: 345 TGEETELDKVLIEHLTDPLIHLVRNAVDHGIEDKEERLKKGKDMTGNVYISAKNSGSEVV 404 Query: 416 IEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I + DDG GLN+E+IL KA +GL +++ +DE+ LIF PGFST E+ T+ SGRGVG Sbjct: 405 ISIEDDGRGLNKEKILQKAFERGLITSPDDIIEDEIFELIFQPGFSTKEEATEYSGRGVG 464 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 +D+VK ++QK+GG + ++S++ GT I +PLTLAI+DGM + V +F++PL++++E+ Sbjct: 465 LDIVKNSVQKIGGRIFVESEKDRGTRFTIRIPLTLAIIDGMLIDVDGNIFVVPLSSIVET 524 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV-VILQSGGRRYA 593 + + + L + RG +++L K+F + + +++ +G + Sbjct: 525 FKLEKQQI-VLENEIPFVYRRGICFGVIDLNKMFYGKDILDKERPFYLGILVTNGEKNGV 583 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 LLVD +I Q Q+V+K L + ++V GIS T++G G++A I+D+ AL Sbjct: 584 LLVDNMISQQQIVIKTLPAILKQVRGISGCTLIGSGNIAFILDIDALL 631 >UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacteria RepID=Q2T8Z1_BURTA Length = 747 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 226/384 (58%), Positives = 284/384 (73%), Gaps = 2/384 (0%) Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 +SIRV+VEKVDQL+NLVGELVITQSMLAQ ++ELD LI +GQL+RN+R+LQE+V Sbjct: 355 SSIRVSVEKVDQLLNLVGELVITQSMLAQAATELDSNQRERLIGGIGQLERNSRELQEAV 414 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MSIRM+P+ VF+R+PR+VRDLA +LGKQV+L ++G TELDK IE++ DP+ HLVRNS Sbjct: 415 MSIRMLPISAVFNRFPRVVRDLAMQLGKQVDLQMIGEHTELDKGFIEKLADPMMHLVRNS 474 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE P+ R+ GK + G L L A QG +I IEV DDG GL RERIL KA GL V Sbjct: 475 VDHGIEAPQARVRGGKPATGRLTLRASQQGSDIAIEVIDDGGGLKRERILEKARESGLPV 534 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 SE M+D EV MLIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I Sbjct: 535 SEAMTDREVWMLIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAI 594 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAILDGMSVR+ +I+PL + E++ P + D+ + G RV+ VRGEYLP+ Sbjct: 595 SIRLPLTLAILDGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQGSGRVVNVRGEYLPL 654 Query: 562 VELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L +F T+ + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + Sbjct: 655 RSLADLFETGQDTTDG--SLALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAA 712 Query: 622 AATILGDGSVALIVDVSALQAINR 645 ATI+GDG VALI+DV +L R Sbjct: 713 GATIMGDGRVALILDVMSLVMSAR 736 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 113/258 (43%), Gaps = 22/258 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F FF+EA+E L ME LL PDAE LNAIFRAAHSIKGGAG FGF Sbjct: 1 MSIDLSQFSDVFFEEAEEHLRAMETLLLACDVSNPDAEDLNAIFRAAHSIKGGAGAFGFV 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH++E LLD R+ E+ L +++ FL D++ L AY+ ++ S Sbjct: 61 ELTGVTHVLETLLDRIRKKELPLRAAMVDAFLRATDLLAVMLAAYRSAEALPEQSIAETK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQ-----------------DEQSRSQSPRRII 163 ++L +L+ AVT +S + + D P + Sbjct: 121 RSLERLSQGEGAHDGDAVTPVSEPVAAPAEHDGDAHPLAEDLDDAYRDTSPAVTPPPGCL 180 Query: 164 LSRLKAG---EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAED--DITAVLCFVIEA 218 R+ AG + + L + + G+ + + D DI L F+I+ Sbjct: 181 HVRIAAGAPIDDAGVMSCLASYGRVLEHHPGSCDRPWRYLCETSRDAADIHGTLTFLIDP 240 Query: 219 DQITFETVEVSPKISTPP 236 D++ + P Sbjct: 241 DRLAIDQAATEEGAMPPE 258 >UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A1QZZ9_BORT9 Length = 717 Score = 521 bits (1342), Expect = e-146, Method: Composition-based stats. Identities = 210/721 (29%), Positives = 355/721 (49%), Gaps = 83/721 (11%) Query: 2 SMDI-SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S D+ F +F +E+ E ++D+E LL ++ E+ E +N+IFR H+IKG AG FGF+ Sbjct: 3 SSDMIDKFKDSFKEESIENISDIEHALLNIEFESG-KEVVNSIFRNFHTIKGSAGMFGFN 61 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINL----------FLETKDIMQE---------Q 101 + H +E +LD + G + N D ++ +E + + E Sbjct: 62 LTASLVHEIETVLDPIKEGSDEFNQDTVDATLMAVDFIRELIEGDEAIDESAYKNREKIL 121 Query: 102 LDAYKQSQEPDAASFDYICQAL-----RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRS 156 +D K+ L Q++L ++ A S+ + + Sbjct: 122 IDTIKKGFGLGVDVGLNTDSVLSSTGGDQISLSNDLDSQGAFLDASLEQGKFEDEALNVE 181 Query: 157 QSPRRIILSRLKAGEV----------DLLEEELGHLTTLTDVVKGAD---------SLSA 197 +I+ S + LL G + + + Sbjct: 182 TKIYKILFSPSRGILFHGHKPINFLKKLLNLGNGQVRARVKNIPDLELMSPDNVYVEWEV 241 Query: 198 ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTG-----RVER 252 L + ++ I + F+ + E V+ S + L G E+ Sbjct: 242 KLETEESKSSIEDIFMFLDGQSKFVVEEVDSSYDMPEAFELDSLVNNLDKGVDEVCSKEK 301 Query: 253 EKTTRSNES-----------------------TSIRVAVEKVDQLINLVGELVITQSMLA 289 + ++++ E SI+V +K+D L+NLVGELV QS LA Sbjct: 302 QNSSKTEEIFNKTALKGGANFNDDTAKSKVNIASIKVDSKKLDHLVNLVGELVTIQSKLA 361 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 E + N+ L + + +L++ +R +P+E +F ++ R+V+DL+ +LGK Sbjct: 362 ---KEAESSNNNILNSISAEFSLLINELRDYTTGLRTVPIEILFVKFQRIVKDLSAQLGK 418 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 + G T LDKS+IER+ +PL HL+RN++DHGIE E+R+ AGK+ G + LSA Sbjct: 419 SIRYHSQGGDTVLDKSIIERLNEPLVHLIRNAIDHGIEPAEERIEAGKDPQGVIKLSAHQ 478 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVT 466 G ++ I + DDG GLN+ +I+ +A + + +SD ++ LIF PGFSTA+ VT Sbjct: 479 SGDSVIIIIEDDGRGLNKRKIIKRAIERYIISDAVSRTLSDVDIYNLIFEPGFSTADVVT 538 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 +VSGRGVGMDVVK+ ++ + G+V ++S+ G T I+++ PLTLAI++G VRV DE FI+ Sbjct: 539 NVSGRGVGMDVVKKQVESLRGNVILESEFGKYTRIKLIFPLTLAIIEGWLVRVRDEHFIV 598 Query: 527 PLNAVMESLQPRE--ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 PL++V L+ + + + V+ RG + + L + F ++ ++++ VV+ Sbjct: 599 PLSSVESCLEADKLMSKVCGFENNSNVMNYRGSMISFIRLREFFEISDEESDSEH--VVV 656 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 + + + ++VD+++GQHQ V+K L Y KV G+S ATILGDGS+AL+VD+ + + Sbjct: 657 VNANSGKIGIVVDEVLGQHQTVIKTLGKIYSKVEGVSGATILGDGSLALVVDIDTITKVI 716 Query: 645 R 645 R Sbjct: 717 R 717 >UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD0_LARHH Length = 616 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 205/658 (31%), Positives = 309/658 (46%), Gaps = 66/658 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + Q F E+ ELL+D++ L+ L+ D LN IFR H+IKGGAG + L Sbjct: 7 MEELLQDFLTESSELLSDVDNKLVELEKYPEDKGLLNDIFRGFHTIKGGAGFLNATPLVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E D + + + + Sbjct: 67 LCHRTE-----------------------------NLFDKLRNGEL-------KLNSHVM 90 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + L+A G L+ P + + G Sbjct: 91 DVILDATGVVRDMFGDLAQSRMPAPAPQHILDNLDAVLS----------------GQTAP 134 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + A S + + + + V+ + P AA Sbjct: 135 VAAAPAAAASQPGEPDWQQLYQAVVVPADAAAQLTSKSAPSTAVAAAPAPVPAATPAASS 194 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-- 302 P + S + +IR+ +++DQ++NL GE+ +T++ L +E+ N G Sbjct: 195 PPPAQSRDRSPASSPQEATIRIDTQRLDQVLNLSGEIGLTKNRLTTIRTEIMQGNLGANT 254 Query: 303 ---LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L ++ QL DLQ +VM RM P+ +F +YPRL RDLA +LGK+VEL L G Sbjct: 255 LRSLDEAVSQLDLLVGDLQNAVMKTRMQPIGRLFQKYPRLARDLARQLGKEVELVLSGEE 314 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDK++IE + DPL HLVRN++DHGIE PE+RLAAGK++ + LSA+ G +I IEV Sbjct: 315 TELDKTMIEDLNDPLVHLVRNAVDHGIETPEERLAAGKSAQSIVELSAQQVGDHIVIEVA 374 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G+N + KA +GL E + D + LIF PGFST +Q++ VSGRGVGMD Sbjct: 375 DDGRGMNAGMLRKKALEKGLIDLEQANSLDDKQALHLIFLPGFSTKDQISSVSGRGVGMD 434 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV+ NIQK+ G ++I S GT I I LPLTLAIL + V+V ++ F +PL V E + Sbjct: 435 VVRTNIQKLNGRIDISSAPNEGTKISISLPLTLAILPVLVVKVCNQPFAVPLAMVREIIP 494 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 + ++ G + VR E LP+ L ++ K V++QS + + L + Sbjct: 495 FSSDSIQEVS-GRPTIVVRDEILPVRRLTELLG---WKATQEPCFGVLMQSAEKTFILAI 550 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 D IG+ VV+K L++ + G++ AT+ GDG+V L++D+ L + +R A Sbjct: 551 DSFIGRDDVVIKPLQNI--RPKGVAGATLSGDGAVVLVLDMEDLLSNDRGDHKLARAG 606 >UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L008_9DELT Length = 723 Score = 520 bits (1339), Expect = e-145, Method: Composition-based stats. Identities = 222/721 (30%), Positives = 346/721 (47%), Gaps = 79/721 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 DI + +E ELL ++E+ LL L+ + D E ++A FRA H+IKGG FGF + Sbjct: 3 DIDPSIGLYVEETRELLGELERGLLDLEKDPTDMEGVDACFRAMHTIKGGGAMFGFEEIS 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD-----AASFDY 118 TH +E + D R G++ + ++++L L KD + LDA ++ P+ Sbjct: 63 RFTHDVETVYDRVRSGQLTVTRELLSLTLAAKDHILALLDAPAEAVGPELRAASDELLAS 122 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQS------------------------ 154 L + K + VA + P Sbjct: 123 FAAFLPAGSQPGKPAAAAPQAAGEAVASANPDQPAYACEGRPGPPGIYWIRFRPAPRILH 182 Query: 155 RSQSPRRIILSRLKAGEVDLLE--EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL 212 P RI+ G V +L + + + ++ + + V Sbjct: 183 TGNDPVRILADLDAMGLVRVLRHGPLPDLDASDFEPEEAYGVYDMLVRTPCGINSLRDVF 242 Query: 213 CFVIEADQITFETV-------------------------EVSPKISTPPVLKLAAEQAPT 247 FV +T E + +V + + + A + Sbjct: 243 IFVEGDSDVTIERIHEGALRDDDLTALLGNLAGLDAAPTDVVLETLGRALAAMLASISQA 302 Query: 248 GRVEREKTTR------------SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 R K R + + ++RV ++D ++ + GELVI QS L Q Sbjct: 303 KAQVRSKVARIGAIEAGAQRQGAPAAATLRVDAARLDSVVTMAGELVILQSRLRQAVQAR 362 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 D + L+R +++ + +RM+P+ VFS++ RL+RDL+ LGK+V+ Sbjct: 363 DLDAAAAVDED---LERLTDAMRDVALGLRMLPIGTVFSQFTRLLRDLSASLGKEVDFEA 419 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 +G TELDK++I+RI DPL HL+RNSLDHG+E P+ R AGK G + LSA H GGN+ Sbjct: 420 LGGDTELDKTVIDRIKDPLVHLLRNSLDHGVEPPDARQRAGKTPHGRVTLSASHSGGNVV 479 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I + DDG G++ + KA +GL + + S+ E+ LIFAPGFSTA ++DVSGRGVG Sbjct: 480 ISIIDDGRGIDPAVVRQKAVERGLLAPDADPSEKELFDLIFAPGFSTAAAISDVSGRGVG 539 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVKRNI+ + G VE++S G GTT+ I LPLTLAI+DG +V V + FI+PL + Sbjct: 540 MDVVKRNIEALRGTVEVESVLGRGTTVTIKLPLTLAIIDGFNVVVGRDSFIVPLVTLRGF 599 Query: 535 L-QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 + + + ER+ G+ +P+V L ++F+V G + + VV+ + G Sbjct: 600 QERFVTGEARTVENMERM----GDLIPVVSLRRLFSVPGEQPGYER--VVVTEVEGEMVG 653 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 VD+++G+ Q V+K+L++ YR + IS TI GDGS++LI+DV L R Q + Sbjct: 654 FCVDRVVGRQQAVIKSLDTCYRHLKWISGTTINGDGSISLILDVPQLVRFVRGQEDSRLH 713 Query: 654 A 654 A Sbjct: 714 A 714 >UniRef50_B1M893 CheA signal transduction histidine kinase n=11 Tax=Alphaproteobacteria RepID=B1M893_METRJ Length = 714 Score = 519 bits (1338), Expect = e-145, Method: Composition-based stats. Identities = 226/696 (32%), Positives = 336/696 (48%), Gaps = 74/696 (10%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F EA ELLA +E LL L D ++ FRA H+IKG FGF + TH Sbjct: 8 EIFRAEAAELLACLETTLLDLGDRPEDRTLIDTAFRALHTIKGSGAMFGFEQVAAFTHDF 67 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 E D RRGE+ + D++N+ L KD ++ ++ + S + I L QL Sbjct: 68 ETAFDRVRRGEVPVGRDLVNVSLSAKDFIRGLIEEPEASA---PIIGEAILAELEQLLGA 124 Query: 130 AKGETPSAVTRLSVVAKSEP-------------------QDEQSRSQSPRRIILSRLKAG 170 A + A + A ++ + R+ + +L L+ Sbjct: 125 AGADAAQAAADTAADAAADTAAASAAPPAEAGWRIGIAFAPDVLRNGTNPLALLDELRDL 184 Query: 171 EVDLLEEELGHLTTLT--DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 + L L L D A L G ++ + V FV + +T E Sbjct: 185 GACTVVPRLEALPELPGLDPESLALGWDVTLRGPVSRAAVEDVFLFVRDEMVLTLEPAGP 244 Query: 229 SPKISTPP------------------------------------------VLKLAAEQAP 246 + + PP A AP Sbjct: 245 ALPDAAPPEPVPAQARAPAPPAPAPVAAEPAPPAAPAAAAAPAAAATPAVAAPPVAAAAP 304 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 + ++S+RV E++D+L++ VGELVI Q+ L Q + L T Sbjct: 305 ADARAPARRAEDRPASSVRVEAERLDELMDRVGELVIAQARLGQLAGLH---ADPGLKTV 361 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 +++R + L+++ MSIRM+ + +F R+ RLV DLA LGK VE G TELDK++ Sbjct: 362 AEEIERLSARLRDTTMSIRMVAIGALFGRFRRLVHDLARDLGKPVEFVTGGEETELDKTV 421 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 IER+ DPL HL+RN++DHGIE P +R AA K + G + L+AEH G + + V DDGAGL+ Sbjct: 422 IERLADPLVHLIRNAIDHGIEAPARRAAAAKPATGRITLTAEHVGAQVLVSVRDDGAGLD 481 Query: 427 RERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 RI AKA +GL +SD ++ +FAPGFSTA ++ +SGRGVGMDVVK+ I+ + Sbjct: 482 AARIRAKAEERGLCAPGAVLSDQQIYQFLFAPGFSTAPTISALSGRGVGMDVVKKTIESL 541 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G ++I ++ G GT + + LPLTLAI++G+ +RV +++PL AV E + + Sbjct: 542 RGTIDITTEPGGGTCVALRLPLTLAIIEGLLIRVGAGRYVIPLAAVEECVALPAGE--RG 599 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 G L +RG +P + L +F G E + V+++ +G R L+ DQ+IG HQ Sbjct: 600 GRGRDFLNIRGALVPFLRLRDLFGAPGEPEEHQK--VIVVSAGEARVGLVADQIIGNHQT 657 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 V+K+L + V S ATILGDG+ ALIVDV L Sbjct: 658 VIKSLSKLHADVATFSGATILGDGTAALIVDVGRLV 693 >UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQS8_ACIBL Length = 727 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 204/702 (29%), Positives = 347/702 (49%), Gaps = 69/702 (9%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ FF+ A ELL + L L+ DAE + I R H++KG + GF L E Sbjct: 10 AELRDLFFESAQELLQALNDEGLELERHPNDAEIVRDIRRTVHTLKGDSAACGFKELSEL 69 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALR 124 H +EN L + +++ L L D L AY + S P + + L Sbjct: 70 AHELENALTP--EITHAASGNLVELVLNAADTFDSLLTAYQRNSALPATDHVRNLIKRLT 127 Query: 125 Q------------------------------------LALEAKGETPSAVTRLSVV---- 144 + +A+E + P + L +V Sbjct: 128 EKPQALDGGALKLEFMWSEYEQLLAEKGASSGARLFNIAIEVDPQCPMRMAALQLVKNVL 187 Query: 145 ----------AKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 + + E + + E + + T L D ++ Sbjct: 188 QGLGVTITIQPEGDMLPENISTIRAILATFQAPENIEKKIQIPAITRRTLLEDYLRPGQP 247 Query: 195 LSAILP--GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVER 252 IL + ++ AV A PK V L + G Sbjct: 248 REGILSRATEAPKETPKAVAPPPKPAPPAPEPKKVEPPKPDLKTVPALLTVEEHDGDAHA 307 Query: 253 EKTTRSN----ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----L 303 + + + +RV +++D ++NLVGEL+I +SML Q S+ + D Sbjct: 308 DAPSPNPFAITPENLLRVDADRIDTVLNLVGELIINKSMLNQTLSDFGKQHAKDPLKARF 367 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 +M + +LQ +VM IRM+P+E +F R+PR+VRD+A GK+ +L + G +T+LD Sbjct: 368 ADAMAFQAQILNELQRAVMKIRMVPVEQLFRRFPRIVRDVARSSGKECDLIISGQNTDLD 427 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 KS+++ + +P+ HL+RN++DHGIELP R+AAGK+ G L L+A +QG + IE+TDDGA Sbjct: 428 KSILDALSEPMMHLIRNAVDHGIELPAARIAAGKSVKGTLKLNAFYQGNQVVIELTDDGA 487 Query: 424 GLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++R+R++ KA + +E ++D + LIF PG STA QVT++SGRG+GMD+V+ Sbjct: 488 GIDRDRVVEKAIENNIVSEKEAEKLTDQDALNLIFRPGLSTATQVTEISGRGMGMDIVES 547 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 ++++ G + IQ+++G GTT ++ +PLTLAI+ + R A+ ++ +PL +V+E + Sbjct: 548 VLRRLKGSIGIQTEKGRGTTFQLRVPLTLAIMQALLFRAANRLYAVPLGSVVEIARATSQ 607 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNV-AGAKTEATQGIVVILQSGGRRYALLVDQL 599 +H + VL++R + + +V L K+ ++E + VV++Q G RR+ ++VD+L Sbjct: 608 HIH-VVDHHEVLQLREQIVTLVRLDKLEGRKRQPQSEKHKVFVVVVQLGDRRFGMVVDKL 666 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +G+ ++V+K L+ N +S A+ILGDG V LI++V+++ Sbjct: 667 VGEEELVIKALDDNLVATDLVSGASILGDGKVVLILNVASVV 708 >UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGB5_RHOM4 Length = 770 Score = 519 bits (1337), Expect = e-145, Method: Composition-based stats. Identities = 186/517 (35%), Positives = 276/517 (53%), Gaps = 24/517 (4%) Query: 160 RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEAD 219 +L+RL+ G + + L D++K I Sbjct: 247 FEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVETRKLQPLPIGAVIERLQAIAEG 306 Query: 220 QITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT---------------RSNESTSI 264 + +P +TP AP+ + R + +I Sbjct: 307 KPAPARSGSTPAAATPEARTTPPATAPSSETADASRSTPAASTPSGNGQAARRDQSTETI 366 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG-----DLITSMGQLQRNARDLQE 319 RV V ++D L++LVGELV+ ++ L Q SEL +L + Q+ +LQ Sbjct: 367 RVEVRRLDNLMDLVGELVLGRNRLLQLLSELSTDGDNAELLRELADTTTQIDFITTELQS 426 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 +VM RM+ + VF+++PRLVRDLA + KQ+EL + G TELDKSLIE I DPL HL+R Sbjct: 427 AVMHTRMVQIGRVFNKFPRLVRDLAREFNKQIELIIEGEETELDKSLIEEISDPLVHLIR 486 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 N+ DHGIE PE R A GK+ G + L+A +G +I IE+ DDGAG++ E+I AKA +GL Sbjct: 487 NAADHGIEDPETRRARGKSPTGRIRLAASQEGNHIVIEIEDDGAGIDPEKIKAKALEKGL 546 Query: 440 TV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 + MSD E LIF GFSTA++V+ VSGRGVGMDVVK NI K+ G + + S G Sbjct: 547 ITEKEATEMSDREALELIFRAGFSTAQRVSKVSGRGVGMDVVKTNITKLNGTISVHSVPG 606 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GT + LPLTLAI+ + VRV +E F +PL++V+E + ++ + G E V+ +R Sbjct: 607 QGTRFTLKLPLTLAIIQSLLVRVGEEAFAIPLHSVIEVVGLESDTVYTIKGRE-VIRLRD 665 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +P++ + ++ V G + VI+ R L+VD LIGQ ++V+K L + +K Sbjct: 666 TVIPLLRVGEMLQVPGWTYHPERAYAVIVGIAHHRLGLIVDDLIGQKEIVIKPLGNYLKK 725 Query: 617 VPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 VPG++ +TILGDG V +I+DV L + ++ + A Sbjct: 726 VPGVAGSTILGDGRVIMILDVGELVRMETQRLRGSEA 762 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 90/219 (41%), Gaps = 2/219 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S ++ + ++F E E+ D+E LL L+ D + ++ IFRA H++KG +G Sbjct: 7 FSEEMREIVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRAVHTVKGTSGFLSLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L H E++L+ R+G + ++++ E D+M++ L ++ + I Sbjct: 67 QLSLLAHHFEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVEERN-LQPIPLEDIL 125 Query: 121 QALRQLA-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L+ LA EA + T + S P QS S P+ A + E Sbjct: 126 RKLKALADEEAAAGSADKTTPTAPQEPSAPTPAQSASADPQEAAALEALAETLFSEEMRE 185 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 + + + + + L L D ++ + A Sbjct: 186 IVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRA 224 Score = 129 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 1/158 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S ++ + ++F E E+ D+E LL L+ D + ++ IFRA H++KG +G Sbjct: 179 FSEEMREIVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRAVHTVKGTSGFLSLE 238 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L H E++L+ R+G + ++++ E D+M++ L + +++ + Sbjct: 239 QLSLLAHHFEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVE-TRKLQPLPIGAVI 297 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 + L+ +A S T + ++ + S Sbjct: 298 ERLQAIAEGKPAPARSGSTPAAATPEARTTPPATAPSS 335 >UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWD3_LEPCP Length = 750 Score = 518 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 237/737 (32%), Positives = 360/737 (48%), Gaps = 100/737 (13%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ D ++ + F +EAD+LL E+ LL L+ + D E LNA FRAAH+IKG AG FG Sbjct: 1 MTDDDILAAAREGFLEEADQLLQQFEESLLGLESDPQDFELLNAAFRAAHTIKGTAGLFG 60 Query: 59 FSVLQETTHLMENL-----------------------------LDEARRGEMQL---NTD 86 + TH +E L L+E R L + D Sbjct: 61 CDAVVGFTHEVETLMEALRSGELAVSEAIFAALLQARDQMGRLLEEVRADRGTLELCDAD 120 Query: 87 IINLFLETKDIMQEQ-----LDAYKQSQEPDAASFDYICQALRQLALEAKGE-------- 133 + + D ++ L A PD L L+L G+ Sbjct: 121 VQAMSQRQADELRALMGLAPLGAATHDGAPDTPVAPAAGAGLWHLSLRFGGDALRNGLDP 180 Query: 134 --------TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE---------VDLLE 176 T V + V S P+ + + RL + +L+ Sbjct: 181 LSFIRYLDTVGTVAAIDTVCDSLPELAELDPEHCHLGFEIRLASSADRQAIEQVFEFVLD 240 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE------------------- 217 + L D L G A+ + ++ + Sbjct: 241 DCSLQLLAPDASAADYDRLLDQRSGGDADAREALLQRWLAQGVPLALRPAVPAAAANALP 300 Query: 218 ------ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKV 271 A E +P ++ + + R K R +++ +RV+ +K+ Sbjct: 301 PTGSNPAADTPDLPPESAPVVAIERRDGERERRKESERRAGAKDRRGDDTRFLRVSADKL 360 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D LI+L+GELVI S + + + ++ ++ ++ + +RM+P+ Sbjct: 361 DHLIDLIGELVIAGSGAELVAQREQSPA---FMEAALRIHDLVQEARDGALGLRMVPIGE 417 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 F+R+ R+VRD++ LGK VEL + G TE+DKS++E I DPL HLVRNSLDHGIE ++ Sbjct: 418 TFARFQRVVRDVSKALGKDVELEITGGDTEMDKSMVEAIADPLMHLVRNSLDHGIEGGDE 477 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEV 450 R A+GKN G L L+A H+ G I IEV+DDG GL RERILAKA +GL + ++D EV Sbjct: 478 RAASGKNPRGKLALNAYHESGQIVIEVSDDGRGLARERILAKAIERGLIDGDTVLTDAEV 537 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 +LIFAPGFSTAE+VTD+SGRGVGMDVVKRNI + GH++I S G GTT++I LPLTLA Sbjct: 538 NLLIFAPGFSTAEKVTDISGRGVGMDVVKRNIDALRGHIQIASTVGRGTTMQIRLPLTLA 597 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG-----ERVLEVRGEYLPIVELW 565 I+DG + D +++PL V+E ++ A +GG ++RGE LP V+L Sbjct: 598 IIDGFLTSIGDVHYVVPLEGVVECIETPPACRAGASGGVGPRLSGCFDLRGEVLPYVDLR 657 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 F + A + ++++++ + LLVD+L+G+HQ V+K L ++++PGI+ +TI Sbjct: 658 TCFQLRSAPP--ARQSMLLVRTATSKVGLLVDRLLGEHQTVLKPLGRVFQQLPGIAGSTI 715 Query: 626 LGDGSVALIVDVSALQA 642 LG G VAL++D+ +L + Sbjct: 716 LGSGEVALVLDIPSLMS 732 >UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJE6_DESAA Length = 778 Score = 518 bits (1336), Expect = e-145, Method: Composition-based stats. Identities = 213/646 (32%), Positives = 325/646 (50%), Gaps = 59/646 (9%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F EADELL E LL ++ + E ++ FRA HS KG G G S + + Sbjct: 190 EMLDRFVTEADELLEQCEAMLLTMEDDTT-GEPVHEAFRAMHSFKGNCGFMGLSDPERMS 248 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H M+ L K+ + I L + Sbjct: 249 HR-----------------------------MENVLSGVKEGIIAPTSDNTGILLKLVDI 279 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 +A + S + + L + E E Sbjct: 280 LRDAVADVSSGGKGA---------------IDNLELYVQLLDEILPEASESEAEPEPAAE 324 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + A+ S P + + + E +P+ A P Sbjct: 325 PQPEAAEPASVPAPAEESPQPSLEI-----------KLGDEKAPEAPQDAASPKAVPAKP 373 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 + R+ IRV + K+D LINLVGELVI ++M+ R+ +L + + S Sbjct: 374 KEMPATKAAPRTIVRQDIRVDLAKLDHLINLVGELVIAETMVT-RNPDLVGHDFENFEKS 432 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 L + RDLQ+ +S+RM+P+ VF + RLV DL+ K GK++ LTLVG TE+DK++ Sbjct: 433 AMHLSKIVRDLQDISLSVRMIPIAGVFRKMIRLVHDLSAKAGKKINLTLVGEDTEIDKTV 492 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 E I DPL HLVRNS+DHG+E P++R AAGK+ G ++L A H+GG + + + DDG GL+ Sbjct: 493 GEIIADPLVHLVRNSIDHGLEPPDERKAAGKDETGEILLQAGHEGGEVWVLIRDDGRGLS 552 Query: 427 RERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 RE IL+KA +GL + ++SD +V +IF PGFSTA+QVTD+SGRGVGMDVVK+NI++ Sbjct: 553 RENILSKAIERGLVNGDGSDLSDSDVYNMIFHPGFSTAKQVTDISGRGVGMDVVKKNIER 612 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + GH+++++ G G TI + LPLT+AI++G+ VRV + +PL AV E++Q + + Sbjct: 613 IKGHIDVRNNPGHGCTIVLRLPLTMAIIEGLLVRVGKAKYTVPLLAVRENIQVTKEMITK 672 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 G+ ++ VRG+ LPI + ++ N + G++VI+++ G L VD+++G Q Sbjct: 673 TMDGQELVMVRGQLLPIYRVHELHNTRPDNYKLEDGLLVIVENRGEMACLFVDEILGDQQ 732 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 V+K L + V G+S TILGDG V+LI+DV+ L + A Sbjct: 733 AVIKGLSNYIGSVRGVSGCTILGDGEVSLILDVAGLIRKAQGLEAA 778 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 50/230 (21%), Positives = 84/230 (36%), Gaps = 9/230 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAP-----DAEQLNAIFRAAHSIKGGAGTF 57 M + F ++ ELL D E L+ LQ + + E +N+IFR HS+KG AG Sbjct: 1 MADATLLGEFVLDSLELLDDAEPKLIELQASSQVPDQVNTESINSIFRLFHSMKGSAGML 60 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ--SQEPDAAS 115 + TH E LLD R G+ Q+ ++ + D+++E L + + + S Sbjct: 61 ELHNITSLTHEAETLLDMFRSGKTQMTRAHMDTLFKAMDLIREILASVDANLTDKGFEDS 120 Query: 116 FDYICQALRQLALEAKGET-PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + L ++ G+ P+ + K P A + Sbjct: 121 VSGLVEELGIAISQSGGDASPAPKAKKPEPVKPLEPPPPPPPPEPVAEPAPEPAAADFSF 180 Query: 175 LEEELGHLTTLTD-VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 E E+ + D V AD L + + V EA + Sbjct: 181 DEFEIPITQEMLDRFVTEADELLEQCEAMLLTMEDDTTGEPVHEAFRAMH 230 >UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYB2_BRAHW Length = 796 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 205/764 (26%), Positives = 358/764 (46%), Gaps = 121/764 (15%) Query: 3 MD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MD I + FF+EA E+L +EQ++L+L E + + + IFRA H++KG AG Sbjct: 1 MDDYIKSLLKDFFEEAFEMLDRLEQNILILDNERNNVDAIQEIFRAVHTLKGSAGAVELV 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 Q+ H E+LLD R +++++ I++ L+ DI+++ ++ + E I Sbjct: 61 ETQKYAHRFEDLLDLIRNNKIEVDDATIDVLLKGIDILKDLINTASEESEYSGDIEAEIK 120 Query: 121 Q-------ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + L Q + G+ P+A S A + P+ E+ ++ S L D Sbjct: 121 KLEDFKNMKLGQGPAPSSGDAPAAAAP-SGNAPAAPEAEKKVNKYELLPNDSDLLGIIRD 179 Query: 174 LLEEELGHLTTLTDVVKGAD-----------------------SLSAILPGDIAEDDITA 210 +EE + + L GD + +T Sbjct: 180 NVEENVKTKLVHVSFDPESPMRTVGGVQVFVALKDVGEIMGSIPPLEALEGDEFYEHVTY 239 Query: 211 VLCFVIEADQITFE------------------------TVEVSPKISTPPVLKLAAEQAP 246 +L + E I + + A + P Sbjct: 240 ILAAIKEDQTIIDAITLPDVTKEISIEEIILEEYEKFLQEKKQKEAQKATPASSGAAKKP 299 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ-----------RSSEL 295 + +S+ +RV +++D ++N VGELV +S Q + + Sbjct: 300 DAGKGGKDHKVERQSSFLRVESDRIDAMMNQVGELVTNKSSYIQYDDDLTSYQKIIGTGI 359 Query: 296 DPVNHGDLITSMGQLQRNARDLQ-ESVMSIR----------------M-MPMEYVFSRYP 337 + V + + L++ LQ + IR M + R+ Sbjct: 360 NEVKRYYRDSIVQILRKFEEHLQKKEAKEIRNTYIDGFNNKLNEFVKMEEEFKNTLDRFR 419 Query: 338 ---------------------------------RLVRDLAGKLGKQVELTLVGSSTELDK 364 RL+RDL+ LGK+V+L + G TELDK Sbjct: 420 NSYQLLTRVTNELQETVMKIRMLPIAQTFNRFPRLIRDLSRDLGKEVKLEMYGEETELDK 479 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 S+IE ++DPL H++RN++DHGIE P++R AGK G ++LSA H+G I I+++DDG G Sbjct: 480 SVIEVLVDPLVHIIRNAMDHGIEHPDEREKAGKPRTGTVVLSASHEGNLIIIKISDDGKG 539 Query: 425 LNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + ++I A +GL ++ +S+ ++ IFAPGFSTA ++T+VSGRGVGMDVVK++++ Sbjct: 540 MIPQKIFESAVKKGLVSADAKLSERQMLEYIFAPGFSTAAKITNVSGRGVGMDVVKKSLE 599 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 K+ G V I+++ G G+T + +PLT+AI+ + V E + +P+N+++E+++ D+ Sbjct: 600 KINGTVGIETEWGKGSTFFLRIPLTVAIIQALIVDAEKEYYAVPINSILETVKIDVKDIQ 659 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 L G E V++VR + + ++ + ++F + VIL S G++ ALLV+ LIG+ Sbjct: 660 ELEGIE-VIKVRDDVINVLSIKELFRLPSRYNNIKSYYAVILSSEGKKVALLVNNLIGEQ 718 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +V+K L+ N K G++ AT+LGDG+V+ I+D+ + ++ ++ Sbjct: 719 DIVIKTLKDNITKSEGLAGATVLGDGTVSFILDIQTIVSLGTKR 762 >UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FDD6_SORC5 Length = 754 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 201/731 (27%), Positives = 328/731 (44%), Gaps = 96/731 (13%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQP----EAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + FF EA E++ + + LL L D + +N +FRA H++KG AG FG + Sbjct: 6 DRAREEFFSEAQEIVEGLGRDLLALDEAVRTNKVDPDVINDVFRAVHTLKGLAGLFGATR 65 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + +H +E LLD R G ++++ +++L + ++ L K ++ D + + Sbjct: 66 MATLSHELEELLDNLRLGRIEVSASVLDLLFRSVELYGRILQNEKDGRDAPMPEVDDLLR 125 Query: 122 ALRQLALEAKGETPSAVTRLS---VVAKSEPQDEQSRSQSPRRIILSRLK----AGEVDL 174 L Q A + P L + +E ++ + R+ + L RL+ +D Sbjct: 126 QLHQDAGPSAAGLPDDNYDLDPGLLSVLTEYEEHRLRTNIASGMTLFRLRVQFHLATIDQ 185 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 ++L + A D E DI +E Q + + Sbjct: 186 ALDDLKITAKPYGEIITYLPTGAGADQDSIELDILMASRAPLEELQRALHQAGAAVEEIP 245 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNEST-------------------------------- 262 AP G R T Sbjct: 246 RRNNNGHGRVAPPGMPSMSAALRGGAPTGVSRAVDLTGSMSAASPPSSARGNRKGELSSI 305 Query: 263 -----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG-----DLITSMGQLQR 312 ++RV + K+D+L+N+VGEL + +S L + L DL R Sbjct: 306 RSVAQTVRVDIHKLDRLMNIVGELALVRSALGRLVERLRAAPTERELSLDLHRLQRTFDR 365 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 + +Q ++ +RM+P+ VF + R+VR ++ K V L + G+ TE+DK ++E + D Sbjct: 366 HLAQMQAGILEVRMVPLGQVFDKLARVVRQISRDADKLVNLVITGAETEVDKLIVEELSD 425 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H++RN++DHGIE R A GK +VG + L+A +G ++ IE+ DDG G++ +++L Sbjct: 426 PLMHMMRNAIDHGIESKSMREAVGKPAVGTIALNAFQKGNHVVIEIEDDGKGIDVDKLLD 485 Query: 433 KAASQGLTVSENM---SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A +G+ E+ S EV LIF PG ST V+++SGRGVGMDVVK NI K+GG + Sbjct: 486 AALRRGVMTPEDARTTSYREVLNLIFQPGISTKTDVSELSGRGVGMDVVKTNISKLGGVI 545 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 ++ S+ G GT + + LP+TLAI+ + VRVAD +F +PL V E++ EA + + G E Sbjct: 546 DVHSEPGIGTKMTVTLPITLAIISALIVRVADRLFAIPLTNVQEAVALDEATVRQIDGRE 605 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKT---------------------------------- 575 ++ +R L + L ++F + + Sbjct: 606 -MITLRNSTLQLCYLARLFGLNEEEELSARIAGLLGGARGGSAARAAVGGGRRGDGGRAT 664 Query: 576 -----EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + + +V+ G RR L+V LIGQ VV+K L + V G S AT LGD Sbjct: 665 LGLQGGSKRKYIVVASVGARRLGLVVSTLIGQQDVVIKALGPSLSSVRGFSGATELGDQR 724 Query: 631 VALIVDVSALQ 641 +AL++D AL Sbjct: 725 IALVLDAPALI 735 >UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7B3_COPPD Length = 684 Score = 516 bits (1329), Expect = e-144, Method: Composition-based stats. Identities = 193/688 (28%), Positives = 338/688 (49%), Gaps = 64/688 (9%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D++++ F E+ + + + +L++L+ + + + L +FRAAH++KG + T GF L Sbjct: 3 DMNEYLPIFLQESYDYINLLNNNLVLLEQDPSNKQALAEVFRAAHTLKGMSATMGFQFLA 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA--------- 114 + H +E+ L R ++ I L D M+ Q+ + ++ + Sbjct: 63 DAAHELESALQIYRDTHEPVDEKAIELGFRVLDYMENQMKRIEANESLEPFHVTSSNEVN 122 Query: 115 --------------------SFDYICQALRQLALEAKGET------------------PS 136 + + AL Q A E Sbjct: 123 EKGKKETTLEVTSSFALGAFEEEVVRAALEQGQKAAILEINLEQGVLMKGVRAFMVFKAI 182 Query: 137 AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS 196 + ++ + + + + + +G++D L ++ + + V + Sbjct: 183 EDSGFEAISSQPDAESLEKEEFDLEFRVLVVGSGDLDSLRNKILRIAEVASV-----DVI 237 Query: 197 AILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 I + A + L Q +P S AA A T ++ Sbjct: 238 EIGLNEQAFPSSSNELREQTSTKQSDSGEGTKNPNSSDSLAQAYAASAAATAEEVDQQQQ 297 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 + IRV E V+ L++ + ELV+ ++ L + N L + +L R+ Sbjct: 298 KKPIKNYIRVPEEHVNNLMSAISELVLEKAELELA---IKTGNEEALWSLYERLSRSINL 354 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 Q + ++RM P+ +VF R+PR+VRDL+ L KQV + G TE+D+++I+R+ DPL H Sbjct: 355 AQGEITALRMTPLSFVFERFPRMVRDLSRDLQKQVRFIMEGGDTEIDRTIIDRLGDPLVH 414 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 L+RN++DHGIE PE R+ AGK+ G + L A H+G N+ I V DDGAG++ ++LAKA Sbjct: 415 LLRNAVDHGIERPEDRIKAGKDPTGTVRLKAYHEGNNVYIVVEDDGAGIDTAKVLAKAVE 474 Query: 437 QGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +GL S+ +S +E+ +F PGFST++ V+++SGRGVGMDV+K ++++GG V+++S Sbjct: 475 RGLVTSDQASFLSQEEIFSFLFLPGFSTSDTVSEISGRGVGMDVLKNTVEELGGTVQVRS 534 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G GTT+ + LPLT+AI+ + V+V +F LPL+ V E EA G VL Sbjct: 535 VLGKGTTVIMRLPLTMAIISALLVKVNGLIFALPLSVVEEISNDVEAVKETPQGN--VLL 592 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 +RGE LP+ + + N+ +V++++G ++ ALLV + +G+ ++V+K L+S Sbjct: 593 LRGELLPVYSVAGLLNLP---DNGQNNHIVVIRNGQKKAALLVAETVGKQEIVIKPLKSR 649 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQ 641 + + AT+LGDG++ L+V+ S L Sbjct: 650 FV-PRYVDGATLLGDGTIGLVVNTSMLL 676 >UniRef50_D2LCX3 CheA signal transduction histidine kinase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LCX3_RHOVA Length = 768 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 194/654 (29%), Positives = 316/654 (48%), Gaps = 73/654 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E + + ++E H++V + + E + IFR H+IKG +G G LQ+ Sbjct: 1 MDELLSDFLSEVTDHIQEIESHVVVFEKNPANTESIRQIFRLFHTIKGTSGFLGLDRLQK 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H E L+D R G ++ +L L+ D ++ L++ + E Sbjct: 61 VSHAAETLIDALRSGRGPVSPA-ASLLLKAIDRVKSLLESVGELGE-------------- 105 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 E G+ V R+ + E++R+ Sbjct: 106 ----EPAGDDGDIVGRIEQFLGQSEEAEEARTDL-------------------------- 135 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 AD+ A+ P I + +I + D VE SP V A Sbjct: 136 -------ADATDALQPEPIVQQEIAPA---PLSTDAFATAMVETSPPAPKADVDASAT-- 183 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + T + ++R+ + ++++L ELV++++ + S + D + Sbjct: 184 -------KPDTGKETGQETLRIPTVVIQRIMDLATELVLSRNQIMNLSQQQD---MHQMK 233 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L +LQ++VM RM P+ +F PRL+RDL+ + GK+ + + G+ T LD+ Sbjct: 234 MPLERLSALTSELQDAVMQARMQPLRRLFDSVPRLIRDLSAETGKEFNVVIEGADTRLDR 293 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 LIE I DPL HLVRN DHGIE P +R GK G + ++A I IEV DDG G Sbjct: 294 QLIEAIRDPLMHLVRNCADHGIESPAERAERGKPVAGLISIAATQDSSQIVIEVADDGRG 353 Query: 425 LNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 + ERI AKA +GL ++ M+D+EV I PGFSTA+ VT +SGRGVGMDVV+ + Sbjct: 354 FDSERIRAKAVERGLADADSVARMTDEEVYRFILEPGFSTAQAVTTISGRGVGMDVVRAH 413 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++ +GG + + S++G G+ + +PLTLAI + VR A + F LP V+E+L + Sbjct: 414 LEAIGGSIGLHSQKGAGSRFLLRIPLTLAIEPALIVRAAGQRFALPQKYVVEALDYYDGS 473 Query: 542 -LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + GER+L +R E LP+ L +F+V + +V++L+ GGR+ L+VD + Sbjct: 474 HVIGEMDGERILRLRDEVLPVAPLAAMFDVDENDASPDK-VVIVLRLGGRKLGLIVDGIG 532 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ-AINREQRMANTA 653 ++VVK L ++K TILG+GSV LI+D + + + ++ TA Sbjct: 533 DIQEIVVKPLSRFFQKDRIFCGCTILGEGSVILILDPAGMADHMKLDREPIKTA 586 Score = 42.9 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 AV ++ D+ A G VL + +P+V L G A +++IL G Sbjct: 616 GAVSRIVRVDATDITR-ADGRFVLRYQDRLIPVVPL------TGQSLCAKSSLILILNVG 668 Query: 589 GRRYALLVDQLIG 601 + L +D ++ Sbjct: 669 SETFGLAIDAVMD 681 >UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B4 Length = 675 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 204/675 (30%), Positives = 334/675 (49%), Gaps = 36/675 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD S++ F E+ E L ++ ++ ++ D + ++ IFR AHS+KG + T GF+ + Sbjct: 1 MDTSEYLPMFLAESREHLQELNLAVVRIEETPDDRDTVDEIFRIAHSLKGMSATMGFAAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH ME++ + R+ L + +++ + D ++ ++ + + + Sbjct: 61 AALTHQMEDVFELLRQRADGLPREAVDVLFKCLDALEAAVEEIATDG-AEQLDPAALIEQ 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII-----LSRLKAGEVDLLEE 177 L+ L E E + E + + + + A + + Sbjct: 120 LKGLIRERTPEQELDKIGGVDLPDLPTVRELADGSRVVHVAADLSDEALMPAVRAFMFFQ 179 Query: 178 ELGHLTTLTDVVKGAD--------SLSAILPGDIAEDDITAVLCFVIEADQITFETVE-- 227 L L L + D L A L D + I A V + + + + + Sbjct: 180 ALAELGELVGSIPAQDGVEQFQGTRLEAWLASDREDHVIEAAAAGVSDVEHVAVQEAQDD 239 Query: 228 -VSPKISTPPVLKLAAEQAPTGRVEREKTTRSN------------ESTSIRVAVEKVDQL 274 + P I T AE A G + + ++RV E++DQL Sbjct: 240 LMPPSIETLSAAHADAEPALVGGPAVDHAAPARRVATNHAAGGAHAGATVRVDAERLDQL 299 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 ++ +GELVI ++++ + + D L ++ + R+++ LQ VM +RM+P+E VF Sbjct: 300 MHFMGELVIHRTVVETLAGDADVPG---LQQAIQDMARSSQALQAMVMQVRMIPVEAVFL 356 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+PRLVRDL+ KL K+VEL LVG TELD+++++ + DPL HLVRN+LDHG+E P++R A Sbjct: 357 RFPRLVRDLSSKLSKEVELQLVGQETELDRTVVDALGDPLVHLVRNALDHGLEPPDEREA 416 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM---SDDEVA 451 AGK G L +SA H GGN+ I V DDG G++ ++ KA +GL E + A Sbjct: 417 AGKPRTGVLEISARHAGGNVVISVRDDGRGVDPAKVAQKAFERGLISEEAIPAVDSQRAA 476 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 L+F GFSTAE +D+SGRGVGMD V+ I+++GG V + S+ G G T I LPLTLAI Sbjct: 477 ELLFTAGFSTAESTSDISGRGVGMDAVQAKIRELGGEVIVDSEFGVGMTASIRLPLTLAI 536 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 + + V F +PL+ V +L+ + + +A G+R+L +R LP+++ + Sbjct: 537 MSALLVEAEGMPFAVPLDRVERTLRLEDHAVRSVA-GQRMLVLRDGVLPLIDAGEALAGR 595 Query: 572 GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSV 631 + VI++ RR AL V L+GQ ++V + L +S +L +G + Sbjct: 596 VVPSGEAHDHAVIVRGRDRRLALAVGTLVGQRELVTRPLPPEVSDRAAVSGGAVLSNGEI 655 Query: 632 ALIVDVSALQAINRE 646 +LIVD AL A E Sbjct: 656 SLIVDCDALTARATE 670 >UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZV35_9SPHI Length = 671 Score = 515 bits (1326), Expect = e-144, Method: Composition-based stats. Identities = 194/668 (29%), Positives = 345/668 (51%), Gaps = 35/668 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S F + F E+ ++L D+E L+ L+ + + E LN IFR H+IKGGA G L Sbjct: 1 MSQFSEKFIQESQDMLTDLESDLIELEKDLSNEEYLNNIFRYLHTIKGGALMIGLDHLGS 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E + R G +++ I++L + D +++ L + + + L+ Sbjct: 61 FIHEIEAIFALLRDGAKKIDDQILSLSFQAVDHIKKVLKDPNLTDHFLKENQQNLIAVLK 120 Query: 125 QLALEAKGETPSAVTRLSVV---AKSEPQDEQSRSQSPRRIILSRLKAGEVDLL------ 175 QL + + + V +++ V ++ ++ P ++ LK+ + Sbjct: 121 QLQNQDQN-LENIVPKMNYVYGMTIKPISPLKTDTEHPIIFVIKELKSTYENYFLKRIAH 179 Query: 176 EEELGHLTTLTDVVKGADSLSAIL-----PGDIAEDDITAVLCFVIEADQITFETVEVSP 230 EEE+ + D V D L A+ +I+ ++ + F + T ++ Sbjct: 180 EEEILFWFIIVDQVSEKDELEALFLFVEDDFEISIQELGSSEDFHLSEQMKTKLNEQIQD 239 Query: 231 KISTP------PVLKLAAEQAPTGRVE---REKTTRSNEST------SIRVAVEKVDQLI 275 K P + +EQ + E ++ +T NE+ S R++ KV++LI Sbjct: 240 KKELPSLEDTKKIFANLSEQVSKNKPEVASQDNSTAINENKANERTGSTRISKYKVNRLI 299 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 N V EL+ S L +S + DL +++ L+E V S+ + P+ + ++ Sbjct: 300 NAVSELMTLNSSLKNIASTH---SLNDLNLITEKIELEINHLREDVFSLNLRPLSTLNTQ 356 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 + R+VR+L+ + GK+VE +VG TELDK +IE + +PL H++RNS+DHGIE E+RL Sbjct: 357 FKRMVRNLSKQQGKKVEFEMVGGDTELDKHMIESLENPLLHILRNSIDHGIEPSEERLKK 416 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLI 454 K G + LS + G ++ IE+ DDG G+N +++ AKA +G+ SE MSD+E+ LI Sbjct: 417 EKKETGLITLSGYYTGTDVIIEIKDDGRGINADKVRAKAIERGIIEQSEVMSDEELYHLI 476 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 PGFSTA+++T++SGRGVGMDVVK+NI + G++ I S GT I LPLTL+I+DG Sbjct: 477 CYPGFSTADELTELSGRGVGMDVVKKNIDSLKGNLHISSTPQKGTHFTIRLPLTLSIIDG 536 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + V V + +I+P+ ++ + + + +++V G+ + ++ L K F + Sbjct: 537 LLVDVENVKYIVPMFSIDQIYRLPTKSIEREDYFSFLVQVDGQQISVLNLRKEFQFNQQE 596 Query: 575 T-EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 + + V++L + + + VD++ G+ Q ++K + ++ I ++ILGDGS+AL Sbjct: 597 NIDIKEMDVIMLSNNEKSQGIAVDKIYGEIQAIIKPIGKHFSTQKYILGSSILGDGSLAL 656 Query: 634 IVDVSALQ 641 ++D L Sbjct: 657 VLDTHRLI 664 >UniRef50_C6NWJ7 Signal transduction histidine kinase CheA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWJ7_9GAMM Length = 641 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 192/648 (29%), Positives = 321/648 (49%), Gaps = 23/648 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + + EA ELL + L L+ + D L ++FRA H++KGGAG + L Sbjct: 1 MD-REILEDYLPEARELLEQAQDMALRLEADPQDDNILASLFRAFHTLKGGAGFLEATAL 59 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E+LLD R + + +I+ L D++ + L+ +EP + + + Sbjct: 60 VDWAHHLEDLLDRLREHAVAVTPAVIDGILRGIDVIADMLNTLALGEEPSPGP-EELART 118 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 +R+L + T A + + + + + L + EE G Sbjct: 119 IRELTAARAQNA-AQQTPAVADAPAPGTTTTASDEISTADLAAALGRLQTAHASEEQGQT 177 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 T + L + GD A A V ++PP A Sbjct: 178 TDEISQEEFEAYLDKLY-GDGAPGLGGASPSPSPAPSPEPAALVRDEQANASPPSHAKAV 236 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 PT E +++RV +++D ++N VGELV+ ++ L ++++ D Sbjct: 237 HSPPTANEFGE--------STLRVDAQRLDAVMNQVGELVLLRNRLTAAAAKI-LDGDED 287 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + ++ DLQ +VM +RM P + +F + PR+VRD + +LGK+V L +VG E+ Sbjct: 288 MARIAREMDLTVNDLQNTVMRLRMQPCKRLFQQLPRVVRDASRQLGKEVRLEIVGEEVEI 347 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK++++ + PLTHL+RNSLDHGIE P +R A GK + ++A H G + IEV+DDG Sbjct: 348 DKTVVDALSAPLTHLLRNSLDHGIEYPAEREALGKPREARIRVAAVHLGDKVRIEVSDDG 407 Query: 423 AGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ +++ AKA +GL +E +S+ + LIF PGFST E+VTD+SGRGVGMDVV+ Sbjct: 408 HGIDAQKVAAKAVEKGLITAEQATRLSEQDAIELIFRPGFSTNERVTDISGRGVGMDVVR 467 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 + + G +++ ++ G GTT+ + PLTLA+L + +R+ E++ LP++++ L Sbjct: 468 ETTRALRGRLDLTTQAGQGTTVALEFPLTLAVLPVLYLRLRREIYALPISSINGLLDIDP 527 Query: 540 ADLHPLAGGERVLEVR-GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 H L GG+ V V +P+V+L ++ + + V+ G LLV + Sbjct: 528 RRQHHL-GGQSVYRVDSDNVVPLVDLGQILHQRPLRLGVEASEGVLTDRG----LLLVSE 582 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 ++G VVK L+ ATI G G V LI+D +++ E Sbjct: 583 VLGTEDSVVKALD-FLSDPNWYQGATISGQGQVVLILDPASIVQKALE 629 >UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAD1_9DELT Length = 725 Score = 513 bits (1323), Expect = e-144, Method: Composition-based stats. Identities = 238/724 (32%), Positives = 352/724 (48%), Gaps = 88/724 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D++ Q F +EA +LL ++E LL L+ D +N IFRA H+IKG FGF Sbjct: 1 MSDDLN--RQIFKEEAYDLLGELEGALLELEESPDDMALVNQIFRALHTIKGSGSMFGFD 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E+ D R + + ++ L L ++D ++ L A + E D+ I Sbjct: 59 DIAAFTHEVESTFDMVRNNALGVTPELCGLALRSRDYIKLLLGATE-GDEVDSTERQAIL 117 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK------------ 168 Q L+ L A E S P + Sbjct: 118 QGLQALCAGEPVAGAVTPDPADAPAPPEAVQASYVSDEPLAGEFCEYRITLTPKAGTKTD 177 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADS----LSAILPGDIAEDDITAVLCFVIEADQITFE 224 ++ L ELG L + + D+ + L DI D++ V FV + Sbjct: 178 ESSLESLFVELGGLGDFQILGRPGDTAAGGWNLSLKTDITADNVRDVFFFVDADLAVDIS 237 Query: 225 TVEVSPKIS--------TPPVLKLAAEQAPTGRVEREKTTRSNE---------STSIR-- 265 E P + +L A++A E + R E IR Sbjct: 238 DSEGMPVLVTGALDVSLPAGPARLKADEAAFNEDEDLEAPRLGEILIQSGDVTEADIRDA 297 Query: 266 ----------------VAVEKVDQLINLVGELVI------TQSMLAQRSSELDPVNH--- 300 VA EKV+Q + E Q L+ D +++ Sbjct: 298 LSKQKPLGQILAEEGKVAPEKVEQAVRRQAEAKEQDASRKQQEALSSIRVAADKLDYLVD 357 Query: 301 --GDLITSMGQLQRNARD-------------------LQESVMSIRMMPMEYVFSRYPRL 339 G+L+ Q+ + + L++S + IRM+P+ +S++ RL Sbjct: 358 LVGELVIVQAQITQVVSERNDPTMTALAEELERLSDELRDSTLGIRMLPIGTSYSKFRRL 417 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VRDL+G LGK++ L VG+ TELDK++IER+ DPL HL+RNS+ HGIELP++R A GK + Sbjct: 418 VRDLSGSLGKEINLVTVGADTELDKTVIERLGDPLVHLLRNSIGHGIELPDERKAQGKPA 477 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPG 458 G + LSAEH GG + + + DDG G++ I K +GL ++ ++ ++ LIF PG Sbjct: 478 QGTIYLSAEHSGGEVLVRIKDDGRGMDPTIIREKGIERGLIAADAELTKKDLLKLIFEPG 537 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FSTA++VT+VSGRGVGMDVVKR I + G +EI S G GT I I LPLTLAI+DG+ VR Sbjct: 538 FSTAKEVTNVSGRGVGMDVVKRAIDSLRGSIEIDSTLGKGTFITIRLPLTLAIIDGLQVR 597 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 V D +++PL+ V E ++ +D+ + +R+L +RGE +P V L F V G Sbjct: 598 VGDGYYVIPLSLVEECVELAASDMDE-SSRQRILHLRGEIVPYVHLRDWFGVEGDSPPIE 656 Query: 579 QGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 Q +VI G R ++VD +IG+HQ V+K+L Y+ V GIS ATI GDGS+ALI+D+ Sbjct: 657 Q--IVITGVEGSRVGIVVDTVIGEHQTVIKSLSRVYKDVEGISGATIKGDGSIALILDIP 714 Query: 639 ALQA 642 +L Sbjct: 715 SLVR 718 >UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Tax=Methanococcus maripaludis RepID=A4FXW0_METM5 Length = 920 Score = 512 bits (1320), Expect = e-143, Method: Composition-based stats. Identities = 179/568 (31%), Positives = 305/568 (53%), Gaps = 24/568 (4%) Query: 89 NLFLETKDIMQEQLDAYKQSQEPDAASFD---YICQALRQLALEAKGETPSAVTRLSVVA 145 +L D + + A + + + + + LE V + Sbjct: 361 DLLSSGSDEIDILISADSDGMDISDSVCEMEYVVSAQVNFEVLENNSPIQEHVIKKPTAP 420 Query: 146 KSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA-------- 197 K+E EQ + LKA L+ ++L + + + + Sbjct: 421 KTEDTCEQYKIDIKID-PECLLKAVRAYLVIKDLKEKGIILETEPSEEKIQEGNLDGNGV 479 Query: 198 --ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 D +E+DI ++ E I+ E V S +I + A + + + Sbjct: 480 TIYYDTDESEEDIKEIISKTPEITSISIEMVHKSIEIPEFDLKNKNTTDATSKK--QSDN 537 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 + S +S ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L A Sbjct: 538 STSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNAVGRLNMLAT 594 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +LQE VM +RM+P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + +PLT Sbjct: 595 ELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDELAEPLT 654 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RNSLDHGIE ++R+ GK G L L A + + I + DDG G+N + + K Sbjct: 655 HLIRNSLDHGIEHADERIKLGKPEKGVLKLIATRKRDRVNIIIKDDGKGINPDAMREKVI 714 Query: 436 SQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +G+ +E ++D+E LIF PGFSTAE V+DVSGRGVGMDVV+ I+ +GG V + Sbjct: 715 KKGMYTKEEAEKLTDNEAVNLIFLPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSVSVH 774 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT I + LPLT+AI+ + VR+ ++++ LPL +V++ + + + L G E ++ Sbjct: 775 SEVGKGTEITLHLPLTMAIIQTLLVRLKEQIYALPLTSVLDVISVEKDQIKNLEGQEAII 834 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R LP++ L N +E VV+++ + +++D++IG+ ++VVK L Sbjct: 835 -YREHILPVIWLKDALNTY-EVSETENLYVVVVEKNKGKVGVILDEVIGRDEIVVKPLTG 892 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + + G++ ATILGDG VALI+D++ + Sbjct: 893 ILKNINGLAGATILGDGRVALILDLNNI 920 Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 90/202 (44%), Gaps = 1/202 (0%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVL 62 D+ + + F EA+E L + Q+++ L+ D+E +N IFR+AH++KG A T GF + Sbjct: 3 DMEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHI 62 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH ME++LD R G +++N +I++L + D ++ + + + + + Sbjct: 63 SSLTHHMEDILDYIRDGRIKINPEIVDLLFKCLDALETMVSEVSDGENTTNVDVNTLVET 122 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 ++ + + S + + ++ E + + S +K E G++ Sbjct: 123 IKSVKTKYLSGDYSPGSSVDEISADEKNELEQEPAQNSDFNESLIKLTEESTNIVIKGNV 182 Query: 183 TTLTDVVKGADSLSAILPGDIA 204 + + D + + + Sbjct: 183 NDTVERPENLDDILNQMQESAS 204 >UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Tax=Euryarchaeota RepID=C7P7C7_METFA Length = 969 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 163/469 (34%), Positives = 280/469 (59%), Gaps = 8/469 (1%) Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L + G T+ +K ++ I + +I V + + E E + Sbjct: 503 LDGDFNGTKFTVYMKLKEGYNVDDIKEHIMNVPEIKDVQIITSKGEVSEHEEKEEAKAQE 562 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 + + E+ P + + +K + + +IR+ +EK+D+L+NLVGELVIT++ +Q ++ Sbjct: 563 QQQPQQKSEEKKPEAKPKTDKKEKKKSTQTIRINIEKLDKLMNLVGELVITRANFSQIAN 622 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 + +L ++ +L +LQE VM++RM+P+ YVF+R+PR+VRD A LGK+VE Sbjct: 623 KY---QLKELNNAINRLSMLINELQEEVMAMRMVPVAYVFNRFPRMVRDTAKALGKEVEF 679 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 + G+ ELD+++++ + +PL HL+RN+LDHGIE PE+R GK G L L A+ + + Sbjct: 680 IMEGTDIELDRTVLDELAEPLVHLIRNALDHGIEPPEEREKMGKPRKGTLKLIAQRERDH 739 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSG 470 + I V DDG G++ ++I KA +GL E +SD E LIF PGFSTAE+V++VSG Sbjct: 740 VNIIVEDDGRGIDPDKIRKKAVEKGLISEEEAKKLSDHEAINLIFLPGFSTAEKVSEVSG 799 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVK I+ +GG V + S++G GT + + LPLT++I+ + +++AD+V+ +P+ + Sbjct: 800 RGVGMDVVKTKIESLGGSVVVYSEKGKGTRVVLKLPLTMSIITALLLKLADQVYAIPITS 859 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVILQSGG 589 V++ D+ + G ++ R E +P++ L ++ + +V+++ Sbjct: 860 VLDVTVVNRKDVKNIEGTYSII-YRDEIIPVIWLKDFLGMSHLQDKNKEELTIVVIERSE 918 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 + ++VD+++G+ +VVK L + +PG++ ATILGDG VALI+D+S Sbjct: 919 GKIGVVVDEVVGREDIVVKTLTGILKNIPGLAGATILGDGRVALILDLS 967 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 1/170 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M ++++ F +EA+E + ++ + LL L+ + + + +N IFR+AH+IKGGA T G S Sbjct: 1 MGDVMNEYLDVFVEEAEEHIQNINECLLELEKDPSNLDLINQIFRSAHTIKGGARTVGLS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH ME++LD R G++ + ++I+++ E D ++ LD K + + + Sbjct: 61 HISDLTHHMEDILDYIRNGQIPVTSEIVDMLFECLDALEVMLDEVKSGNTETSVDVNSLI 120 Query: 121 QALRQL-ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + ++QL G + A ++ EP E+ S A Sbjct: 121 EKIKQLKDKYLSGGSKPAEAPTPKPSEQEPTSEKKEESKGEVSEESEKSA 170 >UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase cheA n=1 Tax=Heliobacillus mobilis RepID=Q0PIE6_HELMO Length = 893 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 191/656 (29%), Positives = 320/656 (48%), Gaps = 44/656 (6%) Query: 10 QTFFDEADELLADM-EQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF----------- 57 + F +ADE + + L+ L D L +FR H++KG G Sbjct: 245 ENFLTDADEHSEIICGKLLIDLDGNPGDMAALADLFRRVHTLKGNLGLLLSFQGPDAPLR 304 Query: 58 -GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 E ME LL++ R + + + ++ D +Q + + Q + Sbjct: 305 AAAKETMEVFQRMEELLEKIRTLRLPVPVWVTDICFACMDALQRLMTMMRSGQMEKDPAN 364 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + + L ET + S V+ + + S + L+R E E Sbjct: 365 PPLLKELVAARDRLDAETSTVPLPNSSVSATAGEPITSSQKGQEDPSLARTNIREPKKDE 424 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 + K +S D+ + S Sbjct: 425 STSEEASAQKHRDKDLNSNFG--------------------GDKSNRAAEKTQGDSSDRN 464 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 K + P+ R + + SIRV+ EK+++L+N + EL +T++ +Q + +L Sbjct: 465 NAKGGSLSCPSKRTGSD-SIHGTTGHSIRVSEEKINRLMNAIAELAVTKNAFSQIARKLM 523 Query: 297 -----PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 PV ++ + + R + +L++++M++RM + VF ++PR++RD+A + GK++ Sbjct: 524 MEHNLPVISREVKDAGQWVSRISAELEDAIMAMRMTEVRTVFQKFPRVIRDIALQTGKRI 583 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 L + G TELDK++I++I DPL HLVRN+ DHGIE +R+A GK+ G + L A +G Sbjct: 584 SLMMEGEDTELDKTIIDQIGDPLMHLVRNAADHGIEPEAERIAKGKDPQGRVWLRAYSRG 643 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDV 468 + IE+ DDG GLN + + KA +G +E+M++ + LIF PGFSTA+ V+++ Sbjct: 644 KYVFIEIEDDGKGLNPQALKEKAVEKGFITAAQAEDMNETQAYQLIFLPGFSTAKAVSEI 703 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVGMDVV+ NI + G + I S+ G GT + + LPLTL + G+ V VA ++ ILPL Sbjct: 704 SGRGVGMDVVRNNITALRGTISISSQLGKGTKLVMQLPLTLVVSRGLMVEVASQMLILPL 763 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 + V+E+L+ L + G ++L RGE L +V L +V + G + + VVI+ G Sbjct: 764 DNVLETLKVPGERLL-MYRGRKLLHHRGEVLGVVSLAEVIGM-GQEELTERTPVVIVTDG 821 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 + L+V++LIG+ V+VK L +PG+ TI+GDG VAL+++ L + Sbjct: 822 HMKVGLIVNRLIGEQDVLVKPLPDYLSSLPGMGGGTIMGDGRVALVMNPIELIKMA 877 Score = 117 bits (295), Expect = 9e-25, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 121/335 (36%), Gaps = 12/335 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S D + Q F +EA E L +E+ LL L+ LN IFR H++KG A FGF+ Sbjct: 5 FSADDVEMLQAFIEEAGEYLQRVEEELLKLEVSDGTPGVLNDIFRQIHTLKGLASFFGFA 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + +H E +LD R +QLN+ I+ L L D + E + ++S E + Sbjct: 65 EITRLSHQAEYVLDALRSDRIQLNSSIVELLLNAGDALGEMIRLLQESCE------KWNA 118 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + ++ L + + L + +P S G E E Sbjct: 119 GTVLEIELTCSQDVEKLIQDLESIIPPKPSASGGTMASTTVQDSLEPVGGTPSDCESEDK 178 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 T V + ++ +A ++A + L + + +T + V Sbjct: 179 GTETEASVGQAFNAPNAPNAPNVAVVQEGSDLPVASDRNHVTVNQDTHIDRELMALVKGQ 238 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVE----KVDQLINLVGELVITQSMLAQRSSELD 296 A+ A + + + ++ + L +L + + L S Sbjct: 239 ASAAAAENFLTDADEHSEIICGKLLIDLDGNPGDMAALADLFRRVHTLKGNLGLLLSFQG 298 Query: 297 PVN-HGDLITSMGQLQRNARDLQESVMSIRM-MPM 329 P ++ + +L E + ++R+ +P+ Sbjct: 299 PDAPLRAAAKETMEVFQRMEELLEKIRTLRLPVPV 333 >UniRef50_C7M283 CheA signal transduction histidine kinase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M283_ACIFD Length = 728 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 199/654 (30%), Positives = 315/654 (48%), Gaps = 85/654 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ + F E+ E L ++ +L L+ + + + + + FRA H++KG G GF Sbjct: 1 MTGASPEELAEFLAESQENLDRFDRDVLALESDPSNRDAVASAFRAIHTLKGTCGFLGFG 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L+ H E +L +D + + A D + Sbjct: 61 RLEGLAHDGE------------------SLLARVRD---GAVRVDAAVADALLALEDAVR 99 Query: 121 QALRQLALEAKGETPS-AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 ++L +A + R +VA +E E RS + ++ Sbjct: 100 RSLDAIAATGDEDDEHWEELRARLVALAEQAHEAPRSVAGANAVV--------------- 144 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 F + P+ Sbjct: 145 ----------------------------------FAPAPSSGAPAELSSGPESQASVEGD 170 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 +A P G+ T T++RV V +D+L+NLVGELV+ ++ + Q + Sbjct: 171 VARGAEPDGKSGARPTLGE---TAVRVDVGLLDRLMNLVGELVLARNRVMQLAQ---SEG 224 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L S QL A +LQE VM RM P++ +F++ PR+VRDLA +LG++VEL L G Sbjct: 225 SAALAASTQQLSIIASELQEQVMKTRMQPIDTLFAKLPRVVRDLARELGREVELVLEGRD 284 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELD+++IE I DP+THL+RN++DHGIE P++R + GK + G L + A H+GG++ I+V+ Sbjct: 285 TELDRTIIEAIRDPMTHLIRNAIDHGIEPPDERRSQGKAAHGVLRIDAYHEGGSVIIDVS 344 Query: 420 DDGAGLNRERILAKAASQGLTVSENMS---DDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ E + A+A ++GL ++ ++ EVA LIF PGFSTA V+ VSGRGVGMD Sbjct: 345 DDGRGIDLEAVRARALARGLVHADELARLGPREVAELIFVPGFSTATTVSAVSGRGVGMD 404 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK N++ +GG ++I S G GT +R+ +PLTLAI+ + V + F +P A+ E ++ Sbjct: 405 VVKTNVESVGGSIDIDSDPGRGTRMRLRIPLTLAIIPALMVETHGQRFAIPQAALAELVR 464 Query: 537 PR---EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA--TQGIVVILQSGGRR 591 L + VL R +P+++L + +A E VVIL +G Sbjct: 465 LELDGRHSLVEIVDHTPVLRRRDRLVPLLDLGAILGLAPPFPERGLDAVSVVILSAGATS 524 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + ++VD+++ ++VVK L ++ S ATILGDG VALIVDV + + Sbjct: 525 FGIVVDRIVDTQEIVVKPLGQFVSQLQCYSGATILGDGRVALIVDVGGIAQLGG 578 Score = 51.7 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 14/136 (10%) Query: 513 DGMSVRVAD-EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 + + E + L + + + + G E V++ RG + +V L + +A Sbjct: 601 PVIVLAAGGTERLGVRLREIERLEEFALGAVEYVEGHE-VVQYRGGVMRLVRLAHLVGLA 659 Query: 572 GAKTEATQGIVVI-LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 V++ + G+ L+VD++ L+ V A +L DG Sbjct: 660 SQPARPDPINVIVAVDPAGQLVGLVVDEV----------LDMALAPVSRTHGAIVL-DGK 708 Query: 631 VALIVDVSALQAINRE 646 + ++++ AL E Sbjct: 709 LVRVLELDALLERAGE 724 >UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHI1_LEPBA Length = 731 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 215/719 (29%), Positives = 348/719 (48%), Gaps = 84/719 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + E+DELL +ME LL + P + +NAIFRA H+IKG AG FGF Sbjct: 1 MDLTEVIDAYLVESDELLREMEVILLRTESSLPTEDDMNAIFRAVHTIKGTAGMFGFDST 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL----------DAYKQSQEPD 112 H++ENLLDE R + + + L+ KD + + D Q Sbjct: 61 VSFAHVVENLLDELRSKTIPFQIPLTEILLKAKDHLSYLVSEETRGKISSDKLSFGQNIL 120 Query: 113 AASFDYICQAL------RQLALEAKGETPSAVTRLSVVAKSEPQDEQ------------- 153 ++ ++ Q + E+ E+ + + S + + D + Sbjct: 121 DEMKPFLLASVAPNPIQNQSSNESVAESNTTIHHQSNLEQKSENDSKNSISSYLISFRPN 180 Query: 154 ----SRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDD 207 S P I K G + L+ L + L D + Sbjct: 181 QNVFSHGLDPISFIGYLKKIGTILSLKTIEQFLPEGNEYDPENCYLGFEINFKTDKDLET 240 Query: 208 ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVA 267 + V F+ + + + +L E+ G + +E ++E+ + + Sbjct: 241 VQKVFNFIEQDCFLHIYPPGFNVLDLVDLSNQLPEEEIFLGNIWKEIQILNDETFLLYLE 300 Query: 268 VEKV-------------DQLINLVGEL---VITQSMLAQRS--SELDPVNHGDLITSMGQ 309 K+ D NL ++ + QS Q+S ++D +LI +G+ Sbjct: 301 EIKIRKTGIPSTALAHTDSHTNLKTKITPEIPEQSKETQKSMTIKVDSKRIDNLINRVGE 360 Query: 310 L------------QRNARDLQESV-MSIR-------------MMPMEYVFSRYPRLVRDL 343 L + +LQES M IR M+P+ F +Y R+VRDL Sbjct: 361 LVVSCANMNQLIGDSDDSNLQESSQMVIRLLNEVREISLKLRMVPIGESFQKYSRIVRDL 420 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 L K + L G TELD++++E++ DPLTHLVRN+ DHG+ELPE RL GK G + Sbjct: 421 GKDLQKDIRLITEGDETELDRNIVEKLSDPLTHLVRNACDHGLELPEDRLNVGKPKQGTI 480 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM-SDDEVAMLIFAPGFSTA 462 L+A H+ GN+ IEV+DDG G+++E++ K +GL E SD+EV L+F PGFSTA Sbjct: 481 RLNAYHEAGNVIIEVSDDGNGISKEKVWKKGIEKGLVTGEIPDSDEEVYKLLFHPGFSTA 540 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 Q+T+VSGRGVG+DVV +NI+ + G + ++S G+ + LPLTLAI++G V V Sbjct: 541 SQITNVSGRGVGLDVVSKNIEALRGTITVKSTPSQGSRFILRLPLTLAIIEGFLVAVGKS 600 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 FI+P+ V+E L + H + +RG +P + L + ++ EA + + Sbjct: 601 HFIIPMEMVLECLHFSDD--HKTESNQ-FFALRGNLIPFLRLKDYYPCE-SEEEAFRENI 656 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VI+++G ++ ++V++L+G++Q V+K + S +R V G+S ++ILGDG+VALI+DV +L Sbjct: 657 VIVRNGEKKAGIVVEKLLGEYQTVIKPMGSVFRHVKGVSGSSILGDGNVALIIDVPSLF 715 >UniRef50_C7RK06 CheA signal transduction histidine kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK06_9PROT Length = 1797 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 183/645 (28%), Positives = 315/645 (48%), Gaps = 35/645 (5%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 F +EA EL + L + D+E + + R H++KG A G L E Sbjct: 1035 EQLLPLFLEEALELNQGIATQLRAWRSNPADSEVVRRLARLFHTLKGSARMAGAMNLGEL 1094 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA--ASFDYICQAL 123 TH +E ++EA+R ++I+ D++ + +++ ++ + DA D + Sbjct: 1095 THAIETRMEEAQRAG-PAAPELIDDVDNVFDVIVQAVESLQRGESSDALVEVPDDVVAEA 1153 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 ++ + G AV + + ++ E Q+ ++ + + R I+ R++A +D L E G L+ Sbjct: 1154 DVESVASAGGLAGAVEQAAPASQREAQEGETDAATQRAIL--RVRADLIDRLVNEAGELS 1211 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 ++G D+ E+ I + +E+ ++ L E Sbjct: 1212 IARSRIEGEMRSIKGSLLDLTENVIRL---------RRQLRDIELHAELQMQSRTALTDE 1262 Query: 244 Q-APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 +E ++ TR E T R+ E V+ + L+ N D Sbjct: 1263 SHTDFDPLEFDRFTRFQELT--RMMAESVNDVATAQQSLL---------------KNLDD 1305 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 ++ R R+LQ+ +MS+RM+P + R R+VR ++GK+ L + G+ EL Sbjct: 1306 ANAAILAQSRLNRELQQELMSVRMVPFASIADRLYRIVRQATKEIGKRANLEISGAELEL 1365 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++++++ PL H++RN++ HG+E + RLA GK +G L L+ +G + + +DDG Sbjct: 1366 DRTVLDKMLAPLEHILRNAVAHGLERADVRLAKGKPEIGELSLTLAQEGNEVILCFSDDG 1425 Query: 423 AGLNRERILAKAASQGLTVSENMSDD-EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AGL+ ER+ + + GL E +D V LIFAPG STA +V+ +SGRG+GMDV+K Sbjct: 1426 AGLDLERLRERGLAAGLLTREEAADPTRVVDLIFAPGISTASEVSRLSGRGIGMDVLKSE 1485 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 + +GG +E+ S G GTT R+ LPLTLA+ + VR + +P + + L +E Sbjct: 1486 VASLGGRIEVVSNIGQGTTFRLYLPLTLAVTKALLVRSGKREYAIPSAMIEQVLDLKEKG 1545 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-VVILQSGGRRYALLVDQLI 600 L + +V G P L + + A E Q V++L+SG R L VD L+ Sbjct: 1546 LARIRD-AKVASWSGNPYPFHYLPHLLGDSQALPEKHQQYWVLLLRSGTGRIGLQVDGLL 1604 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 G ++VVKN+ +V G+ AT+LG+G V LI++ AL + R Sbjct: 1605 GNQEIVVKNVGQQLARVIGVDGATVLGNGQVVLILNPVALASRTR 1649 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 74/321 (23%), Positives = 126/321 (39%), Gaps = 23/321 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F DEADE+LA ++Q+ +L+ DA+ L A+ R+ H++KG G L E Sbjct: 682 AELLGIFLDEADEVLASIDQNFQLLKTRPHDADLLAALRRSVHTLKGSGRMVGLKDLGEA 741 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK--QSQEPDAASFDYICQAL 123 +E +L+ R E ++ I++L +T + +D K Q + PDA+S +L Sbjct: 742 AWSIEQVLNLWLRQEQEVTPAILDLLAQTYRVFLAWVDHLKTGQGRAPDASSMIAHADSL 801 Query: 124 RQLALEAKGETP--SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 RQ + EA E P + A E E P A + L Sbjct: 802 RQGS-EAATELPRTGDAVVAPMGAAGEEAGELPSDSEPESTSEQAPVAYQEAKTRRRLAL 860 Query: 182 LTTLTDV---VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L ++ GA + + + D A + T + + I+ L Sbjct: 861 APDLVEIFNAEAGAHLATLQRELEPLQADPNAPTKHEMYRAAHTLAGIAATLGIAAVNRL 920 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 A E + R + +IR + EL + MLA +SE +P Sbjct: 921 AHALEHSLVRRNQAAHPDSLEALETIRQTIA----------ELAL---MLADVASEHEPE 967 Query: 299 NHGDLITSMGQL--QRNARDL 317 +L+ ++G L ++ A +L Sbjct: 968 ATPELVDALGTLYPEQVAEEL 988 >UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XW80_LEPCP Length = 756 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 217/728 (29%), Positives = 351/728 (48%), Gaps = 82/728 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++D TF +EA+E +EQ LL L+ + D + L+A+FR AH++KG AG FG + + Sbjct: 13 LADALPTFINEANEQTESLEQLLLQLEEQPGDRDLLDALFRCAHTVKGSAGMFGLDKVVD 72 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E LL R G + L+ + L L+ D ++ + + + + + Sbjct: 73 FTHHVETLLSRIRDGLIDLDLGVSTLLLQCNDQIRHLIGSAADAGADTPEQVERRADLVM 132 Query: 125 QLALEAKGETPSAVT----------------------RLSVVAKSEPQDEQSRSQSPRRI 162 QL A R V + P+ ++ P + Sbjct: 133 QLHALLGASDRRAAAAGPADASVDPPADAPDDDAPMLRWHVSVQFGPETFRN-GMDPLAV 191 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGD--IAEDDITAVLCFVIEADQ 220 I G V+ + + + L + L+ + D +++ FV + Sbjct: 192 IAYLETLGSVEAIGCDQAAIPALDVIDAEQCHLAFEVCIDTRATREELEGAFSFVRDDCV 251 Query: 221 ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN---- 276 + + P +++ ++ G + ++ + + ++L Sbjct: 252 LHLIDLPEGPG-RLARLIEALPDRPRLGDILMSIGAVTHAQLQACLNQQAQNRLATPDEV 310 Query: 277 -LVGELVITQ---------SMLAQRSSELDPVNHGD------------------------ 302 L+GEL+ T+ + L ++ + DP + Sbjct: 311 PLLGELLQTKAGVHGEVVAAALDKQRKQRDPAPGDENRYIRVHADRLDAVINLLGELVIA 370 Query: 303 ---------------LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 L + + R +++ + +RM+P+ FSR+ R+VRD A +L Sbjct: 371 GAGAAMLARQTRQRNLHEANQNVVRLIEEIRNGTLQLRMVPIGETFSRFRRVVRDTASQL 430 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK+V L +VG TELDKS++ERI DPL HLVRN LDHG+E P +R AAGK +VG L+LSA Sbjct: 431 GKEVTLEIVGGETELDKSMVERIADPLMHLVRNGLDHGLETPAERQAAGKPAVGRLVLSA 490 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVT 466 H+ G++ I + DDG G++RER+L +A +GL D E+ LIF PGFSTAEQVT Sbjct: 491 RHESGSVLIRIDDDGRGIHRERVLQRAWDRGLLERGTRPPDAEILKLIFEPGFSTAEQVT 550 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 +SGRGVGMDVV+RNI+ + G V++ S +G GT I I LPLTLAI+DG V V FI Sbjct: 551 SLSGRGVGMDVVRRNIEALRGSVQLHSTEGLGTRIDIRLPLTLAIIDGFLVSVGASKFIF 610 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL+ V+E ++ R G +E+RG+ LP+V L +++ E ++++ Sbjct: 611 PLDTVVEVIENRPTTTGFDRRGRGTVELRGQVLPVVSLRVFYDLESPPPERDN--IIVVN 668 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 +G + ++VD L+GQHQ V+K L ++ + G+S ++ILG+G VALI DV +L + + Sbjct: 669 AGEAPFGIVVDALLGQHQTVIKPLGRIFKMLRGLSGSSILGNGEVALIADVMSLSHLAAQ 728 Query: 647 QRMANTAA 654 + A Sbjct: 729 PPRVHVPA 736 >UniRef50_B4X286 Hpt domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X286_9GAMM Length = 2409 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 174/653 (26%), Positives = 303/653 (46%), Gaps = 33/653 (5%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +E++EL ++ L + A+ ++ + RA H++KGGA G L + + Sbjct: 1638 EILEIFLEESEELSDIIDACLTSWKDHPESADFIDDLKRALHTLKGGARLAGLKQLGDIS 1697 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H E L E L+ D + +++ + + +A + Sbjct: 1698 HDFETYLLELESRRQTPAQSDFQPMLDWHDQINRGMESVAAAAQTNAPVAET------PD 1751 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A P+A + + + D + R + + R+ A ++ L G + Sbjct: 1752 AAAPANTLPAATDKQPAPQQPQKDDRRQRQNQAQPQEMVRVGADVLEALVNLAGETSINR 1811 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 V+ I +++ + + E + E + + L Sbjct: 1812 GRVEQ-----GITEFAFNVEEMGNTVQRLYEQLRRLDSETEAQIMSNYQKGVDLGEYDED 1866 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 +E ++ + ++ T QL +L+ ++ L R+ D T Sbjct: 1867 FDPLEMDQYSELHQITK---------QLSESASDLLDLKNTLLDRN--------KDTETL 1909 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + Q R +LQE +M RM+P + R R+VR ++G++ K+V+ ++ ELD+SL Sbjct: 1910 LLQQARINTELQEKLMRTRMVPFSRLVPRLRRIVRQISGEVDKRVDFDVLNPEGELDRSL 1969 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +ER++ PL H++RN++DHGIE E R +AGK+ G + L +GG + I ++DDG G++ Sbjct: 1970 MERVVAPLEHMLRNAVDHGIETSEGRQSAGKDGTGRINLELGREGGEVVITLSDDGKGID 2029 Query: 427 RERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 + + KA +GL ++ +S+ E+ IF GFSTA VT +SGRGVGMDVV I++M Sbjct: 2030 TDAVRQKAIERGLIAADAQLSEQEIQQFIFHAGFSTAAAVTQISGRGVGMDVVASEIKQM 2089 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 GG V I S++G GT I LP TLA+ + V+ A++ + +PLN + ++ +L Sbjct: 2090 GGSVTIDSRKGQGTRFIIRLPFTLAMNRALMVKAAEDSYAIPLNQIEGIVRISPFELQHY 2149 Query: 546 -AGGERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 V G+ + L + V + + T V++++S A++VD L+G Sbjct: 2150 FEEENPVYTYVGQDYELQYLGHFVHGNRVPHLENQTTPMPVLLIRSTEHTVAIVVDDLVG 2209 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +VVVK + V GIS ATILGDGSV +I+D+ +L Q A A Sbjct: 2210 SREVVVKAVGPQLATVAGISGATILGDGSVVIILDIHSLIRAAHVQTTALAAG 2262 Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats. Identities = 67/385 (17%), Positives = 130/385 (33%), Gaps = 70/385 (18%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EADE+L L + + + +L ++ R H++KGGA L + Sbjct: 1470 ELVEIFLEEADEILESAGNSLELWISQQDNLIELQSLQRDLHTLKGGARMAEVPELGDLG 1529 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + + ++ + + +L D + E ++A K ++ S + + A+ Sbjct: 1530 HELETLYEGLAQSQLAIEPTLFDLLHRCHDQLAEMVEALKANRPL--PSGEVLISAIHGY 1587 Query: 127 ALEAKG----------------ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 A + G P+ + + D+ ++ S I+ L+ Sbjct: 1588 AADPAGFTLPTMAASPAAQPASPPPATAASEAPAPANTAADDAWQADSDPEILEIFLEES 1647 Query: 171 EV--DLLEEELGHLTTLTDVVKGADSLSAIL--------------PGDIAEDDITAVLCF 214 E D+++ L + D L L GDI+ D T +L Sbjct: 1648 EELSDIIDACLTSWKDHPESADFIDDLKRALHTLKGGARLAGLKQLGDISHDFETYLLEL 1707 Query: 215 VIEADQITFETVEV----------------------SPKISTPPVLKLA----------- 241 + +P TP A Sbjct: 1708 ESRRQTPAQSDFQPMLDWHDQINRGMESVAAAAQTNAPVAETPDAAAPANTLPAATDKQP 1767 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD---PV 298 A Q P R++ ++ +RV + ++ L+NL GE I + + Q +E Sbjct: 1768 APQQPQKDDRRQRQNQAQPQEMVRVGADVLEALVNLAGETSINRGRVEQGITEFAFNVEE 1827 Query: 299 NHGDLITSMGQLQRNARDLQESVMS 323 + QL+R + + +MS Sbjct: 1828 MGNTVQRLYEQLRRLDSETEAQIMS 1852 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 49/289 (16%), Positives = 98/289 (33%), Gaps = 13/289 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA+E+L L + D+ ++++ R H++KGGA G + + + Sbjct: 1287 ELVELFLEEAEEILESASHILDQWEA--GDSSNVSSLQRDLHTLKGGARMAGVAPVGDLA 1344 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +ENL + G+++ + + L + D + ++ + + P A + + Sbjct: 1345 HELENLYEGYNAGQLESDAALFQLLHQCHDSLAVMIENLQANIAPADAPA-LVAAIQAFI 1403 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 EA G + + E + SP + A +E+ Sbjct: 1404 RGEAPGAVTPSAPDDDSTSPFSNTGESESADSPVMPAANATDAPAPVAVEDAPEPTEAPP 1463 Query: 187 DVVKGADSLSAIL-PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + + + L D + L I E + + T AE Sbjct: 1464 QPERDPELVEIFLEEADEILESAGNSLELWISQQDNLIELQSLQRDLHTLKGGARMAEVP 1523 Query: 246 PTGRVEREKTTRSNESTSIRVAVE---------KVDQLINLVGELVITQ 285 G + E T ++A+E DQL +V L + Sbjct: 1524 ELGDLGHELETLYEGLAQSQLAIEPTLFDLLHRCHDQLAEMVEALKANR 1572 Score = 75.6 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 4/246 (1%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +E E+L ++++ D E L RA H++KG G S + E +EN Sbjct: 693 FQEEVGEVLDALDEYFPRWAANTSDEESLVEFRRAFHTLKGSGRMVGASTVGELGWSVEN 752 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 +L+ + +I L E ++ + ++A+ Q A A Sbjct: 753 MLNRVIDRTIVPTAVLIALVQEVRNRVPALVNAFTLRQPDPFDVQPLADAADTLAAGGQI 812 Query: 132 GETPSAVTRLSVVAKSEPQD----EQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 + P V S + +P ++L E D E + Sbjct: 813 DQVPVIVADDSTTDAIDDTATDTIADVSPDAPDTLVLEADAHSEPDSTLELTELPSAENA 872 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 ++ + + + + D + + + + + P Sbjct: 873 DAPSSEHTLSAEDLAAFDAAASEDTLTPWDTDDSSDDIHVLPVDNDLTEIDESLTLDLPE 932 Query: 248 GRVERE 253 + + Sbjct: 933 QEPDYD 938 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 84/274 (30%), Gaps = 23/274 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F EA LA + Q L + + +++ RA H++KG A + E Sbjct: 983 LLEIFSSEARRNLALIAQWLAGNDTDLSEHPVDDSVHRALHTLKGSARMAEIEAVAEVAE 1042 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E L + + N ++L ++ D++ LD + D + Q+L Q Sbjct: 1043 PAEKLARDLISSNRRANQQQVDLLAQSHDLILTSLDQLDPTPPAHLPGADALIQSLNQQR 1102 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 + +G S P ILS + +DL+ + L+ Sbjct: 1103 DQLQG---------------------CDSPGPDPHILSVFLSEGMDLIVDAEQLLSQWAQ 1141 Query: 188 VVKGADSLSAILP--GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + D L + ++ TA L + + +L A Sbjct: 1142 HPEHTDELVRLRDELELLSNSATTAGLNEIHDLAAALAGCYSAVEGGRLAYSERLFALAG 1201 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG 279 ++R + VD L L Sbjct: 1202 EGQDALMNMMDCLAAGQTVRPELGLVDALRELAE 1235 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 83/278 (29%), Gaps = 23/278 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E +L+ D EQ L ++L + + A T G + + + Sbjct: 1117 ILSVFLSEGMDLIVDAEQLLSQWAQHPEHTDELVRLRDELELLSNSATTAGLNEIHDLAA 1176 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 + G + + + L E +D + +D Q + ALR+LA Sbjct: 1177 ALAGCYSAVEGGRLAYSERLFALAGEGQDALMNMMDCLAAGQTVRPELG--LVDALRELA 1234 Query: 128 LEA----------KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + + + ++ S P E S + L V+L E Sbjct: 1235 EGDGPDGGPDGGLPVDDHNDDSSNTLQNNSAPVSELSAETPDSSRYEAHLDPELVELFLE 1294 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 E + + D A +++ L + + V+P Sbjct: 1295 EAEEILESASHI--LDQWEAGDSSNVS------SLQRDLHTLKGGARMAGVAPVGDLAHE 1346 Query: 238 LKLAAEQAPTGRVEREK---TTRSNESTSIRVAVEKVD 272 L+ E G++E + S+ V +E + Sbjct: 1347 LENLYEGYNAGQLESDAALFQLLHQCHDSLAVMIENLQ 1384 >UniRef50_A3J8A3 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8A3_9ALTE Length = 2176 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 177/658 (26%), Positives = 304/658 (46%), Gaps = 17/658 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +EA +L+ L ++ + R H++KGGA G + + T Sbjct: 1386 ELMGIFLEEAYDLINATGSALHSWSENPENSMLAAELQRDVHTLKGGARMAGADAMGDLT 1445 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + RGE++ ++ D + ++ + A + + QL Sbjct: 1446 HALEGLFELITRGELKPGPELYEPLFACHDRLAAMVEQIATGKACPPAQ--DLIAQVHQL 1503 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + E + V + ++V + Q+ + +P TL Sbjct: 1504 HPPQQTEPSALVQKPAIVEQKVEQEAAQEAPAPAPEQRQTPTVAVPKPKPARTQTRKTLR 1563 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL------ 240 + + +L + T++ +E F + + + Sbjct: 1564 TTQETIRVSAPLLDELVNLAGETSIARGRLEQQTSDFSHTLEEMAATIERLREQLRRMDI 1623 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 E R E+E E + +++ + L L + S L L Sbjct: 1624 ETETQILFRAEKELGPDYGEDFDP-LEMDRYSSIQQLSRALSESSSDLIDLRQTL-ADRI 1681 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 D T + Q R +LQE +M RM+P V R R+VR ++ +L K+ + + Sbjct: 1682 RDTKTLLVQQSRINTELQEGLMKTRMIPFASVVPRLRRIVRQISAELDKKANFEVYNAEG 1741 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+D++++ER+I PL H++RN+LDHG+E PEKRLAAGK G + LS + +GG++ + + D Sbjct: 1742 EMDRNVLERMIAPLEHMLRNALDHGVEAPEKRLAAGKAETGEISLSLQREGGDVVLRMRD 1801 Query: 421 DGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DGAG++ E++ KA SQGL + +++ EV LI PGFSTA+++T VSGRGVGMDVV Sbjct: 1802 DGAGISTEQVRNKAVSQGLVGPNDVLTEREVLQLIMTPGFSTAKEITQVSGRGVGMDVVA 1861 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 I+++GG ++I S G GTT + LP T+++ + V D + +PLN + ++ Sbjct: 1862 SEIKQLGGSLDIHSSAGHGTTFTVRLPFTVSVNRALMVTSGDNFYAIPLNTIEGIVRVST 1921 Query: 540 ADLHPLAGGE-RVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALL 595 +L E + E G+ + L + N +A V++++ + AL Sbjct: 1922 YELEEYYKPEAPLYEYAGQEYRLQYLGNLLNSEHQPKLQGQALPLPVILVRGAEQPMALQ 1981 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA--INREQRMAN 651 VD L+G ++VVK+L + V G+S TILGDG+V +I+D+ A+ I EQ+ A+ Sbjct: 1982 VDSLVGSREIVVKSLGPQFNSVRGVSGGTILGDGNVVVILDLPAMIRSDILSEQQRAS 2039 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 4/198 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +EA E+LA +++++ +L D L + RA H++KG G V+ E Sbjct: 760 DEILEVFIEEAGEVLASIDEYMPMLLRHYGDRSALGEVRRAFHTLKGSGRMVGADVIGEL 819 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +ENLL+ G ++ + L + I+ + ++Q + +A+ D R Sbjct: 820 AWSVENLLNRVLDGSRSMSDAVAALISDVIAILPALVSDFEQHR---SATVDTHEAQARA 876 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE-EELGHLTT 184 AL + +A + ++ + QS P S + +D+ E E L HL T Sbjct: 877 HALADGKDVLAATSAVAASEAATGDVLQSPDSGPELDDESDVDQLLLDIFESEALSHLKT 936 Query: 185 LTDVVKGADSLSAILPGD 202 + + A + D Sbjct: 937 VEAYIASAANKQTTAYTD 954 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 74/394 (18%), Positives = 135/394 (34%), Gaps = 50/394 (12%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +EA+E+LA + ++ LQ D L + RA H+ KG G S L E Sbjct: 607 DEIVGIFIEEAEEVLATIHEYYPRLQRNHDDRAALAEMRRAYHTFKGSGRLVGASSLSEL 666 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQALR 124 +ENLL++ ++ N D+ +L + + + ++ ++ E D A+ +A+ Sbjct: 667 AWAVENLLNKLIDQTVKPNDDVFSLVTDANAYLPQLINEFRAGNPEGDVANLVARAEAIT 726 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE------ 178 +T +A + + QS + + +AGEV +E Sbjct: 727 TTRRADTADTAAATNAPASATDRT-GNPQSELIDDEILEVFIEEAGEVLASIDEYMPMLL 785 Query: 179 --------LGHLTTLTDVVKGADS-----------------LSAILPGDIAEDDITAVL- 212 LG + +KG+ L+ +L G + D A L Sbjct: 786 RHYGDRSALGEVRRAFHTLKGSGRMVGADVIGELAWSVENLLNRVLDGSRSMSDAVAALI 845 Query: 213 --------CFVIEADQITFETVEVSPKISTPPVLKL------AAEQAPTGRVEREKTTRS 258 V + +Q TV+ + L A +S Sbjct: 846 SDVIAILPALVSDFEQHRSATVDTHEAQARAHALADGKDVLAATSAVAASEAATGDVLQS 905 Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 +S VDQL+ + E S L + + + +L R L+ Sbjct: 906 PDSGPELDDESDVDQLLLDIFE-SEALSHLKTVEAYIASAANKQTTAYTDELTRALHTLK 964 Query: 319 ESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 S + + P+ + + R V+D A K+ + Sbjct: 965 GSAHTTGITPIADLVTPLERFVKD-ARAENKRCD 997 Score = 90.3 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 2/170 (1%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 DI + + F +EA EL+ L ++ + + L + R H++KGGA + Sbjct: 1230 DIDHEVLEIFQEEARELIDSTADALQRFSQDSGNHDLLRLLQRDLHTLKGGARLSKVGSI 1289 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E L + + ++ ++ + +L D + ++ + P +A D I + Sbjct: 1290 GDLAHELETLFEGLVQQQLAISPMLSDLLFSCHDRLASMVETLENGDSPRSAP-DLIAEI 1348 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 R + A + L + D S + P + + +A ++ Sbjct: 1349 QRYSSNAASASADHSSVALQPEPSPDAHDTNSVTTDPELMGIFLEEAYDL 1398 Score = 69.1 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 50/312 (16%), Positives = 107/312 (34%), Gaps = 29/312 (9%) Query: 4 DISDFY-QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ F EA L +E ++ + + RA H++KG A T G + + Sbjct: 917 DVDQLLLDIFESEALSHLKTVEAYI-ASAANKQTTAYTDELTRALHTLKGSAHTTGITPI 975 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + +E + +AR + + D+I+L + ++ + L + + Sbjct: 976 ADLVTPLERFVKDARAENKRCDRDVISLLEQGVSLLNQGLLQLHSQPLAELPGSREFLEQ 1035 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L QLA + + + D Q S + R +L + +++++ L Sbjct: 1036 LAQLA-------------RATLTGTSYDDTQLSSANSRSALLELFLSDDINIVLNASRIL 1082 Query: 183 TTLTDVVKGADSLSA--------ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 + +L +I D A L ++ + PK Sbjct: 1083 DSWIANPANGQALEQLRHELTLLTAATEITGLDDIATLSAALQDSYSVLADSDREPKPEL 1142 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 L LA EQ + + + +R QL++L +++ + + LA+ + Sbjct: 1143 QACLHLAHEQLINMMDQAAAGLTIDSADPLR------QQLMDLTDDVLASDAFLAEFQED 1196 Query: 295 LDPVNHGDLITS 306 + +H + Sbjct: 1197 ENLNHHQHIDNE 1208 >UniRef50_Q4ZZ60 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt n=6 Tax=Pseudomonas syringae group RepID=Q4ZZ60_PSEU2 Length = 1992 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 172/639 (26%), Positives = 311/639 (48%), Gaps = 29/639 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ + F +E +++ L Q + + ++ + R H++KGGA + + + Sbjct: 1230 AELREVFLEEGFDIMESSGAALARWQADPHNMLEVENLLRDLHTLKGGARMVEIAPIGDL 1289 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E L + G +Q +I L +D++ + LDA + + AS + +++R+ Sbjct: 1290 AHELETLYEGLSAGSLQPAPLMIGLLQSGQDVLADMLDAVRNEKPLPDASL--LIESIRR 1347 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 LA + PS + + P+ + ++ + GEV+ E+ + Sbjct: 1348 LAT----DEPSGAQLAAQDPEVHPES---------VVAVAPVAEGEVERSGPEMVKVPAE 1394 Query: 186 T-DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + ++I G I + I + + V I ++ L+ EQ Sbjct: 1395 QLEDLVNLAGETSIFRGRIEQQIIDSQIALVEMETTIERMRDQLRRLDMETQGRILSREQ 1454 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 T R+ E+ + +++ QL L L + S L L D Sbjct: 1455 VQTERLGYEEFDP--------LEMDRHSQLQQLSRALFESASDLMDLKETL-GARARDAE 1505 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 T + Q R LQE +M RM+P E + R R+VR +A +L K+V + + E+D+ Sbjct: 1506 TLLSQQARVNTQLQEGLMRTRMVPFERLVPRLRRVVRQVASELHKKVHFEVGNADGEMDR 1565 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ER++ PL H++RN++DHG+E EKR+AAGK G++ L ++GG++ IE++DDG+G Sbjct: 1566 NVLERMVAPLEHMLRNAVDHGLESTEKRIAAGKPEQGHISLELMYEGGDMVIELSDDGSG 1625 Query: 425 LNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 ++ + KA +G+ + ++SD EV I GFST+E +T +SGRGVGMDVV ++ Sbjct: 1626 VDLAAVRRKAIKRGMIHPDADLSDHEVLPFILQAGFSTSEIITQISGRGVGMDVVHAEVK 1685 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG + I S G GT RI LP+++++ + V +E + +PLN V ++ +L Sbjct: 1686 QLGGSMVIDSVPGKGTRFRIRLPISVSVNRALMVTCGEEQYAVPLNTVDGIVRVMANELD 1745 Query: 544 -PLAGGERVLEVRGEYLPIVELWKVFNVAGAK--TEATQGIVVILQSGGRRYALLVDQLI 600 + G + L ++ + + + V+++ + A+ VD L Sbjct: 1746 GYYQTSPPRYQYGGRSYELRYLGELLGSSPPRLAGQLQPLPVLLVHLQDQWVAVQVDALA 1805 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 G ++VVK+L + +V GIS ATILGDG V LI+D+ A Sbjct: 1806 GSREIVVKSLGPQFSRVQGISGATILGDGQVVLILDLMA 1844 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 61/374 (16%), Positives = 124/374 (33%), Gaps = 52/374 (13%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +EA ++L Q L + + L ++ R H++KGGA + + + Sbjct: 1087 DEIVEIFLEEAVDILDSAGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGDL 1146 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA-YKQSQEPDAASFDYICQALR 124 H +ENL + + + L E+ D + L+ Y+Q D ++ ++ R Sbjct: 1147 AHELENLYEGLIDRRFNHSPTLAALLNESHDHLAILLEQLYRQEALSDPSALIEALRSCR 1206 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDE----------QSRSQSPRRIILSRLKAGEVDL 174 L S + E +S + R EV+ Sbjct: 1207 TLESAGPEVQASPAAHEDLPEHDAELREVFLEEGFDIMESSGAALARWQADPHNMLEVEN 1266 Query: 175 LEEELGHLTTLTDVVKGAD------SLSAILPG----------------DIAEDDITAVL 212 L +L L +V+ A L + G +D + +L Sbjct: 1267 LLRDLHTLKGGARMVEIAPIGDLAHELETLYEGLSAGSLQPAPLMIGLLQSGQDVLADML 1326 Query: 213 CFVIEADQITFETVEVSPK---ISTPPVLKLAAEQAPTGRVER--------EKTTRSNES 261 V + ++ + + P A Q P E E + Sbjct: 1327 DAVRNEKPLPDASLLIESIRRLATDEPSGAQLAAQDPEVHPESVVAVAPVAEGEVERSGP 1386 Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 ++V E+++ L+NL GE I + + Q+ D ++ +++ +++ + Sbjct: 1387 EMVKVPAEQLEDLVNLAGETSIFRGRIEQQII--------DSQIALVEMETTIERMRDQL 1438 Query: 322 MSIRMMPMEYVFSR 335 + M + SR Sbjct: 1439 RRLDMETQGRILSR 1452 Score = 75.2 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 7/157 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVL-----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + F +EADE+L + ++L D+ L + RA H++KG Sbjct: 628 DELRDVFLEEADEVLDALREYLPRWFTSLGSDGHWDSTALTEVRRAFHTLKGSGRMVRAL 687 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +L E +ENLL+ G++ ++ L E + ++ + + + + D + Sbjct: 688 ILSELAWAVENLLNRVLEGDVLPGLEVQQLMTEVQALLPSVIRDFAEGAQCQRDDVDLLA 747 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ 157 AL E P V DE Q Sbjct: 748 AR--AHALANGLEPPMLPAADDHVPGQPVADEPLDPQ 782 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 56/332 (16%), Positives = 109/332 (32%), Gaps = 18/332 (5%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F EA L + + L + A +A+ RA H++KG A G + E Sbjct: 782 QLLEIFRQEALGHLNTLGRFLDNAEQSAS-PAISDAVLRALHTLKGSAHMAGVLPIAELA 840 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 ++ L+ E + + + + + L + ++ + L+ + D + +A + Sbjct: 841 SPLDQLVREYKANLIDIGSPELALLRSAEPLLHKGLEQLDSTPLADIPGAAPLIEAALAM 900 Query: 127 A-------LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 L +++A + + + R GE L L Sbjct: 901 LNDRLTVVLRESDSGLRIKRNPTLLAGFLAEGMDIVLDAENLLQRWRQHPGERQELSALL 960 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 LTTL AD + D AV + + F+ E + + + + Sbjct: 961 DELTTLGHGAHLADLPQVDELCEALLDLYGAVEESSLAVSERFFDVAENAHEALINMLDQ 1020 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKV---DQLINL-VGELVITQSMLAQRSSEL 295 +AA Q R E + ++ + + D L V EL + LA + Sbjct: 1021 VAAGQDVEPRPECVRALNQLLDQALDPSATGLVKSDGHRTLSVTELNAATAQLASEAGHT 1080 Query: 296 DPVNHGD------LITSMGQLQRNARDLQESV 321 + D L ++ L + LQ + Sbjct: 1081 EVAGPDDEIVEIFLEEAVDILDSAGQALQRWL 1112 Score = 54.4 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 56/401 (13%), Positives = 117/401 (29%), Gaps = 45/401 (11%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E +++ D E L + + ++L+A+ ++ GA + E Sbjct: 924 LLAGFLAEGMDIVLDAENLLQRWRQHPGERQELSALLDELTTLGHGAHLADLPQVDELCE 983 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYICQALRQ 125 + +L + ++ ++ + + LD Q EP + Q L Q Sbjct: 984 ALLDLYGAVEESSLAVSERFFDVAENAHEALINMLDQVAAGQDVEPRPECVRALNQLLDQ 1043 Query: 126 L-------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 +++ G +VT L+ + + + + E + + Sbjct: 1044 ALDPSATGLVKSDGHRTLSVTELNAATAQLASEAGHTEVAGPDDEIVEIFLEEAVDILDS 1103 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP-------- 230 G + A L D+ A + V E + E + Sbjct: 1104 AGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGDLAHELENLYEGLIDRRFN 1163 Query: 231 ----------------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAV-----E 269 I + + A P+ +E ++ R+ ES V E Sbjct: 1164 HSPTLAALLNESHDHLAILLEQLYRQEALSDPSALIEALRSCRTLESAGPEVQASPAAHE 1223 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM-- 327 + + + E+ + + SS +M +++ RDL RM+ Sbjct: 1224 DLPEHDAELREVFLEEGFDIMESSGAALARWQADPHNMLEVENLLRDLHTLKGGARMVEI 1283 Query: 328 -PMEYVFSRYPRLVRDLAGKLGKQVELTL----VGSSTELD 363 P+ + L L+ + L + G D Sbjct: 1284 APIGDLAHELETLYEGLSAGSLQPAPLMIGLLQSGQDVLAD 1324 >UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF5_9BACT Length = 693 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 169/417 (40%), Positives = 268/417 (64%), Gaps = 11/417 (2%) Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 + A +AP VE+ K + +IRV V ++D L+NLVGELV++++ + Q S +L Sbjct: 135 DATRSGAPEAPQKNVEQVKKAAMSIEQTIRVDVSRLDSLMNLVGELVLSRNRIGQISGDL 194 Query: 296 DPVNHGD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + G+ L+ + Q+ +LQ +VM RM+P+ VF+++PR+VRDL +GK Sbjct: 195 EKKFEGEFLIEQLMETTSQIGLITTELQLAVMKTRMVPIGKVFNKFPRMVRDLCRDMGKD 254 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V+L + G TELDKS++E I DPL H++RNS+DHG+E+PE R GK G + LSA H+ Sbjct: 255 VDLVISGEETELDKSVVEEIGDPLIHMIRNSVDHGVEVPEIRRKRGKPDKGIVNLSAYHE 314 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTD 467 G +I +E+ DDGAG++ E + AKA +G+ ++N+ ++ L+F PGFSTA Q+TD Sbjct: 315 GNHIVVEIKDDGAGMDAEVLKAKAVEKGVITIDEAKNLDNESAYGLVFKPGFSTAAQITD 374 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 VSGRGVGMDVVK NI+K+ G + I+S+ G GT R+ LPLTLAI+ + V V+ E+F +P Sbjct: 375 VSGRGVGMDVVKTNIEKLNGIINIESELGHGTRFRLKLPLTLAIIQALLVDVSGEIFAIP 434 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 L +V+E+++ +E ++H G E VL++R L ++ L +++ + + + VV++ Sbjct: 435 LVSVIETVRIKETEIHSFEGRE-VLKLRDSVLSLIRLDEIYELQESLND--DIYVVVVGL 491 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 +R +V++L+GQ ++V+K+L GI+ ATI+GDG V LI+DV+ + I Sbjct: 492 AEKRLGFVVNKLVGQEEIVIKSLGDYLSGNEGIAGATIMGDGRVRLIIDVAGVMEIA 548 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 7/188 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ D Q F E +E++ ++ L+ L+ D + LN IFR AH++KG + GF + Sbjct: 5 DMQDLVQDFILETEEIIEALDHDLVELETRKNDLDLLNKIFRGAHTMKGASSFLGFDKMS 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH E +L++ R+ E+ + I+++ LE DI + + K + + Sbjct: 65 GVTHHAEEILNKLRKNEISVTPGIMDILLEFVDITKTIIVDIKNG-----TDVADVTDLI 119 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQD--EQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 +L L +G+ P A A PQ EQ + + R+ +D L +G Sbjct: 120 NRLKLANEGKLPGASDATRSGAPEAPQKNVEQVKKAAMSIEQTIRVDVSRLDSLMNLVGE 179 Query: 182 LTTLTDVV 189 L + + Sbjct: 180 LVLSRNRI 187 >UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermococcus RepID=B6YX73_THEON Length = 781 Score = 503 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 173/587 (29%), Positives = 308/587 (52%), Gaps = 36/587 (6%) Query: 90 LFLETKDIMQEQLD-----AYKQSQEPDAASFDYIC---QALRQLALEAKGETPSAVTRL 141 L L + + E ++ + + D +++ ++ +L + Sbjct: 199 LILSDLEELGEIIETKPGREIIEDGKADVDVLEFVVATEESPERLKHVVTRHPEVERVEV 258 Query: 142 SVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS----- 196 + Q+ ++ + + + LK L+ ++L L T+ + ++ Sbjct: 259 EEYHPAAGQENKTYTVTVYIQKDAPLKGVRSYLILQDLQKLGTVQRTIPDTVAIQNGDII 318 Query: 197 -------AILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 ++ + D + V D E + + EQ + Sbjct: 319 DGHYFKVLMVSNVLPNDIVKIVRKHPDVEDVKVEEGDSIEVETKEETEKSRGPEQQAEKK 378 Query: 250 VEREK-------TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E + T + S I+V V +D+L+NLVGELVIT+ L Q + L + Sbjct: 379 AESKPQKLKTVQTPKVKVSKIIKVDVSHLDRLMNLVGELVITKGRLEQIAERL---GDRE 435 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L+ ++ L R +LQ+ +M +R+ P+ VF+++PR+VR+LA K+GK+VE + G+ E+ Sbjct: 436 LLETLSTLSRLLTELQDEIMEMRLTPVAEVFNKFPRMVRELARKMGKEVEFIVEGADIEV 495 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++++ D L HL+RN++DHGIE P++R GK G L L A+ + ++ I V DDG Sbjct: 496 DRTILDKLGDVLVHLLRNAIDHGIESPDEREKLGKPRTGKLELIAKRERSHVEIIVRDDG 555 Query: 423 AGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ E+I KA +GL E MSD+E LIF PGFST EQVTDVSGRGVGMDVVK Sbjct: 556 RGIDPEKIKRKAIEKGLITPERAAEMSDEEAINLIFLPGFSTKEQVTDVSGRGVGMDVVK 615 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 ++ + G + +QS+ G G+T + LP+++AI+ + + V EV+ +P+N ++ES++ + Sbjct: 616 DVVKSLNGTISVQSEVGKGSTFILKLPVSMAIIQALLIEVQGEVYAVPINNILESIEIKR 675 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 +L + GG+ V+ +RGE +P++ L ++F + E + +++ G ++ A+ VD+L Sbjct: 676 ENLKSI-GGKDVIVLRGEIIPVIMLHELFGLP--IPEKDEFPAIVVDLGAQKVAIGVDEL 732 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 + + +V+K+L + G + ATILGDGSV LI++++ L R Sbjct: 733 LHKKDIVIKSLGKMLSHISGFAGATILGDGSVVLIIEINGLLGGGRS 779 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 56/278 (20%), Positives = 109/278 (39%), Gaps = 11/278 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGAGT 56 D+S + F +A + + + +L L+ E ++ IFR AH++KG A T Sbjct: 3 DLSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKKAMIDQIFRDAHTLKGTAAT 62 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 GF L E H MENL D R G+++ D+I++ LE D+++ +D+ +++ Sbjct: 63 MGFMKLSEVAHKMENLFDLVRGGKIEPTPDLIDVLLEFLDVIEGMVDSIEENGNEGDFDV 122 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + + ++ ++ +A + + + + R S K Sbjct: 123 GELFEKAQKFFERSRPVEKAASSTQPKEPLTGEKTPEEAGAEAERTAPSGEKGELPRYRI 182 Query: 177 EELGHLTTLTDVVKGADSLSAILP-GDIAEDDITAVLCFVIEADQITFETV---EVSPKI 232 + H V+ LS + G+I E + +AD E V E SP+ Sbjct: 183 KVYFHKDAQLRGVRAFLILSDLEELGEIIETKPGREIIEDGKADVDVLEFVVATEESPER 242 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 V + + + N++ ++ V ++K Sbjct: 243 LKHVVTRHPEVERVEVEEYHPAAGQENKTYTVTVYIQK 280 >UniRef50_Q0KDN3 Type IV pilus protein histidine kinase/response regulator hybrid PilL n=1 Tax=Ralstonia eutropha H16 RepID=Q0KDN3_RALEH Length = 1941 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 178/657 (27%), Positives = 298/657 (45%), Gaps = 45/657 (6%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Q F +EA L ++ + L + D+ + RA H++KG A G L + H Sbjct: 1135 LVQIFLEEAQGTLPELGKLLRGWEAAPEDSRHGGLVLRALHTLKGSARMAGAMALGQAAH 1194 Query: 68 LMENLLDE-AR-RGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 ME LLD R +G+ + + D + ++A + A D + L + Sbjct: 1195 EMETLLDASLRGQGQQAVGPKLFERLYAWYDRILAHVEALPTGRLLPADDPD-VVNGLAE 1253 Query: 126 LALEAKGETP--------SAVTRLSVVAKSEPQDE----QSRSQSPRRIILSRLKAGEVD 173 + +A+ + P AV S+ A P D + + L R++A +D Sbjct: 1254 VPEQAQADAPLPQADTVVEAVPAASLPAMPGPADVMVAMPPAVPAEPQRALVRVQARALD 1313 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L E G + + G++ ++ + +E+ + Sbjct: 1314 TLINEAGEVGATRARLDSELEAMRAYLGELNDNVARL---------RGQLREIEIQAESQ 1364 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 + A + +E ++ TR E T R+ E V+ + + + Q Sbjct: 1365 MASRIADAQHKQEFDPLEFDRFTRFQELT--RMMAESVNDV-----------ATVEQNLQ 1411 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 GDL R R LQ +M RM+ + + R R+ R A + GK+V L Sbjct: 1412 RGFDRAAGDLAA----QARLTRGLQRGLMQARMVQFDALAERLYRVARQAAAETGKEVRL 1467 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 + G + E+D+S+++R+ P+ HL+RN++ HGIE R AAGK + G L L + +G Sbjct: 1468 LIKGGTVEIDRSVLDRMAGPIEHLIRNAVVHGIEAAAPRRAAGKAATGALTLEVQQEGNE 1527 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 + + DDG GL+ ERI A+A + L ++ S+ + LIFAPGFSTA+ V++++GRG Sbjct: 1528 VVLHFVDDGGGLDLERIRARAVERRLLAPDDDASEARLTELIFAPGFSTADAVSELAGRG 1587 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV+ +GG + ++SK G GTT + LPLT AI + + + + +P + Sbjct: 1588 VGMDVVRAETVALGGRITLESKPGQGTTFTVHLPLTTAITQVLVISLGARRYAVPSGMID 1647 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRR 591 + Q R L A + L V G +P + A + VV+++SG R Sbjct: 1648 QVQQLRAPALLD-AYNQGRLTVAGAEVPFFYFGALLEEGNAVAAGRKYSPVVLVRSGAER 1706 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ-AINREQ 647 A+ VD ++G +VVVK++ + ++ GI+ AT LGDG + LI + L + RE+ Sbjct: 1707 VAVHVDDVVGNREVVVKHIGPHLARLEGIAGATTLGDGEIVLIYNPVVLAQRLVRER 1763 Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EADE+L + L DA+ L+ + RA H++KG + G E Sbjct: 751 AELLDIFLNEADEVLGGIAGDLGSGVEALHDADTLSRVRRAFHTLKGSSRMVGLHRYGEA 810 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E +++ + ++ L + + DAA++ I + Sbjct: 811 AWAVEQVMNLWIAEAREPVPALLALLRRAHAELSAWAAQLHR----DAATWHDIAPLVAA 866 Query: 126 LALEAKGETPSAVTRLSV 143 A L V Sbjct: 867 AEAVRDPGAAQAADELPV 884 >UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4560 Length = 818 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 198/645 (30%), Positives = 320/645 (49%), Gaps = 68/645 (10%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F EA E L +++LLV+ + +A LNA++R H+IKG + G + +Q H Sbjct: 222 MIGDFCQEASEHLETADRNLLVIDGDPTNANALNAVYRGFHTIKGVSSMLGLAAVQMVAH 281 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ-----SQEPDAASFDYICQA 122 ENLL+ AR G+++L ++L + D ++ Q+ + + + + + Sbjct: 282 EAENLLNLARDGKVRLQGKPMDLVFASTDALKRQVQFIRAWSTEGGRLAEDPALPALVAE 341 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 LR A A P A + + + + + E Sbjct: 342 LRVAASGATEAPPRAAPKSVAPPAPVAAAAPAPAAEHVPAPAPKAEKAEHAPAPAPAPKA 401 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 +GA +P L +I ++ + Sbjct: 402 EKAEPAAEGAG--LRRIPEKETVRVDKDRLDKLINTIGELVIAQSMAQQEFDEMSNGSGV 459 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + + S S+R+ Sbjct: 460 GSLALPELAKISRDLQELSLSLRMV----------------------------------P 485 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L + ++ R RDL + K+ K VEL L G TEL Sbjct: 486 LQGTFQKMARLVRDL--------------------------SRKMNKPVELELHGEETEL 519 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DK++++++ DPL H+VRN++DHG+E P++R GK G++ L A HQGG++ IE+TDDG Sbjct: 520 DKTVVDQLGDPLMHMVRNAVDHGLEDPDERTTVGKTREGHVELRAYHQGGSVFIELTDDG 579 Query: 423 AGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL+RERIL KA + + + ++D E+ LIF PGFSTA+ VTDVSGRGVGMDVV+RN Sbjct: 580 KGLDRERILKKAVEKAIIAEGQRLTDPEIYALIFEPGFSTAKAVTDVSGRGVGMDVVRRN 639 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++ + G++ I+++ G GTT I LPLTLAI+DG+ V + D+V++LPL +V+ES +P AD Sbjct: 640 VEALQGNILIRTQAGKGTTFTIRLPLTLAIMDGLMVALGDDVYVLPLLSVVESFRPHPAD 699 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 L +AG + VRGE +P++ L ++F + + +G+VV+++ G+++A+LVD+L+G Sbjct: 700 LRRVAGHGEAVTVRGEVVPLLRLHQLFGRSARVEDPGRGLVVLVEDQGKKHAILVDELLG 759 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 Q Q VVK+L++NYR+V G++ ATILGDG VA+I+D+ L ++ + Sbjct: 760 QMQAVVKSLDANYRRVEGLAGATILGDGRVAMILDIHGLAQLHAQ 804 >UniRef50_A0YJV3 Chemotaxis protein CheA n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YJV3_9CYAN Length = 810 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 167/707 (23%), Positives = 313/707 (44%), Gaps = 100/707 (14%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M ++ + + F ++E L +++ L L+ D +L + R AHS+KG AG G Sbjct: 1 MMIEDDELREVFRTASEEHLQNLDDGFLYLEKNPQDLNRLEELLREAHSLKGDAGMLGVK 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + H +ENLL +G + ++++ + + D +++ + + Sbjct: 61 DIATLAHQIENLLGAINQGRVIFSSEVSDCLFQALDALRKLVQEASTGE----------- 109 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 PS V V+A + QS ++ + +++ E Sbjct: 110 --------------PSGVKTFQVMASLIAAEGQSSLETQPSNDTHLSEQQTLEVSENIEV 155 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + P + E+ + + E Q + E P ++ L Sbjct: 156 ETIKPSPKEP---------PKILLEEPVINLNSSPEEPPQPSLE----KPINTSVSSLSY 202 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML------------ 288 +P + ++ +IRV+ ++D L+ GEL +T+ + Sbjct: 203 PVNPSPKNDDKVTFDGSTHRIETIRVSTRQLDALMTQTGELTVTKIRIVHRLSEVEALTL 262 Query: 289 -------------------------------------AQRSSELDPVN------HGDLIT 305 ++ S L+ + G L Sbjct: 263 LWEEWSRDAFVNRFVLNDLETQSTNTHKAIEQLHNYYSRASQHLEKLGALVNQLRGSLYE 322 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 +L+ + +L++ + ++R++P+ +F+R+ R+VRDLA + KQVEL + G T DK Sbjct: 323 DTARLELISNELEDDIRTLRLLPLSTIFNRFSRMVRDLARQQNKQVELLIEGGETRADKR 382 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E I DPL HL+RN++DHGIE PE+R GK + + L ++ IEV+DDG G+ Sbjct: 383 ILEEIKDPLMHLLRNAVDHGIESPEERQQYGKPPIAQICLRGYQTATSVVIEVSDDGRGI 442 Query: 426 NRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + E+I A +GL E M+ ++ LIF+PGF+T VT++SGRGVGMDVV+ N+ Sbjct: 443 DPEQIKKTALKRGLYPLEELEIMTSKQLQALIFSPGFTTRTLVTEISGRGVGMDVVRNNV 502 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +++ G V+++S G+T R+ L LA + V V + + +P+ V + ++L Sbjct: 503 EQLKGRVDLESVPTKGSTFRMQLGTALATTHVLIVGVQNISYGIPVEFVRTTRLVSPSEL 562 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE---ATQGIVVILQSGGRRYALLVDQL 599 + G + ++ + L + +L ++ + + E +T ++L+ G + + VD L Sbjct: 563 FTIEGRDTII-FEEQPLSVAQLSELLELESSHKEMNASTTFPCIVLKVGEEKLGVFVDTL 621 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 I + VV+K+ ++V I+ ATILG G V ++++ L R+ Sbjct: 622 IDEQDVVLKSQSQLLKRVRNIAGATILGTGEVCMVLNSLDLIKSARK 668 >UniRef50_B4UFH8 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=B4UFH8_ANASK Length = 725 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 217/652 (33%), Positives = 328/652 (50%), Gaps = 39/652 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D + F +E + LA ++ LL ++ + P ++ NA+FR H+IKG AG + Sbjct: 106 DTLELIGDFLEEGLDGLARADETLLAVERDGPHPDRTNALFRVFHTIKGVAGFLELGEIV 165 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H E LLD R G L + ++ E ++ L+ + E A D + Sbjct: 166 SLAHTAETLLDHVRSGRAALAGEAFDVTFEATAALRSLLERLR---EAVDARADLL---- 218 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 ++ P + + + E G T Sbjct: 219 ------------------------------PDARVPGLVARIAAVSAAAEAAPEAAGGGT 248 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + + + + A + + +P P AA Sbjct: 249 APAVPLATELAAAPVAAAAPAANLAAGPVAVAAPPAANPPPRPAPAPPTPAPVAEPEAAA 308 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + + +++V +E+VD ++ ++GEL+I +SM+ + EL V L Sbjct: 309 EPASAAPSPPPHGGGQLRETVKVDLERVDSMVEMIGELIIVESMVVH-APELAAVASLRL 367 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 S+ Q+ + +RDLQ M +RM+P+ F + RLVRDL+ + GK V L G TE+D Sbjct: 368 RNSLNQMTKISRDLQNVAMRMRMVPVRGAFQKMARLVRDLSRRTGKDVVLETSGEDTEMD 427 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 +S++ERI DPL HLVRN+LDHGIE +RLAAGK + L L+A H+GG+I +E+ DDG Sbjct: 428 RSMVERIEDPLVHLVRNALDHGIEPEAERLAAGKAARSVLRLAAYHEGGSIVVELADDGR 487 Query: 424 GLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 GL R+RIL KA +GL + +SD EV L+F PGFSTA +VT++SGRGVGMDVVKRN+ Sbjct: 488 GLQRDRILRKARERGLVGDGQELSDAEVHGLVFLPGFSTAAKVTEISGRGVGMDVVKRNV 547 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 + M G V + S+ G GTT R++LPLTLAI+DGM V E +ILP +++ESL+P + + Sbjct: 548 EGMRGRVTVASRAGGGTTFRLVLPLTLAIIDGMLVSCGGETYILPSLSIVESLRPADDTI 607 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 AG V++VRGE LP++ L ++ A VV+++ GR+ L+VD ++ Q Sbjct: 608 RRAAGRGEVIDVRGEILPLLRLHRLLGARERAAGADDLRVVVVEGLGRKVGLVVDDVVTQ 667 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 QVV+K L S +S A IL DG V LI++V L + A+ A Sbjct: 668 QQVVIKPLGSGLGDTDFLSGAAILSDGRVGLILNVDRLAGLASRDAAADRGA 719 >UniRef50_Q2SPH8 Chemotaxis protein histidine kinase and related kinase n=4 Tax=cellular organisms RepID=Q2SPH8_HAHCH Length = 2726 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 173/660 (26%), Positives = 319/660 (48%), Gaps = 40/660 (6%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 ++D+ + Q F +EA+EL A +E+ E ++ +++ RA H++KGGA Sbjct: 1947 FALDVDPEILQVFVEEANELQASLEREFNDWTREPRNSVHADSMSRALHTLKGGARLATL 2006 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ---------SQE 110 + + + +E+++ +A + +L+ + + + ++ ++ K ++ Sbjct: 2007 TNIGDLAQEIESIVKQAYDHKHELDDALRSEIEILFNRLKSEIGQVKNFYSSQQEAEAEA 2066 Query: 111 PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 A + +AL + ++ + E + AK+E Q Q +Q R+ A Sbjct: 2067 AAAEAPKSEPEALAERMVQMQREQAVPAVKKEEPAKTEMQPAQPAAQRQTAAETVRVSAN 2126 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 +D L G + +++ S + +E Q T + + Sbjct: 2127 LLDNLVNLAGETSITRGLLEQQIS----------------DFTYTLEEMQSTIDRLREQL 2170 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 + + + E R+E+E + + + + + + L L + S L Sbjct: 2171 R-----RMDMETEAQVLFRMEKESGVKYEDFDPLEMD--RYSSIQQLSRALSESSSDLTD 2223 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 E D T + Q R +LQE +M RM+P + R R++R ++ +LGK+ Sbjct: 2224 L-RETMMDKARDAETLLLQQSRINTELQEGLMKTRMVPFTSIVPRLRRIIRQVSSELGKK 2282 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 + + ELD++++ER++ PL H++RN++DHG+E+PE+R A GK+ G + LS + Sbjct: 2283 ADFEVYNPEGELDRTVLERMLAPLEHMLRNAIDHGVEMPEQRRAKGKSETGRIELSVGRE 2342 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVS 469 GG++ + ++DDGAG+N + + KA GL +SD ++ IF GFSTAE+VT +S Sbjct: 2343 GGDVVLILSDDGAGINVDAVRRKAIKSGLIDEGTHLSDHDMLQFIFQAGFSTAEKVTQIS 2402 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV I+++GG V I SK G GT + LP T+++ + V ++ + +PLN Sbjct: 2403 GRGVGMDVVASEIKQLGGRVTIDSKPGHGTRFIVHLPFTVSVNRALMVNTGEDYYAIPLN 2462 Query: 530 AVMESLQPREADLHPLAG-GERVLEVRGEYLPIVELWKVF---NVAGAKTEATQGIVVIL 585 + ++ +L + E G+ + L + + + + V+++ Sbjct: 2463 TIEGIVRVSTYELEEYYKPNAPLYEYAGQKYRLQYLGSLLKSEHHPKLQGQPLPLPVILV 2522 Query: 586 QSGG-RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 + GG + AL VD L+G ++VVK L + + V G+S ATILGDGSV +I+D+ AL + Sbjct: 2523 RGGGDQPLALQVDSLMGSREIVVKGLGTQFSSVRGVSGATILGDGSVVVILDLPALLRSD 2582 Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 63/357 (17%), Positives = 122/357 (34%), Gaps = 32/357 (8%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA +++ + + E + E L + R H++KGGA + + Sbjct: 1470 EMVEIFLEEAQDIIQRTGETMHSWSEELGNLEHLKELQRDLHTLKGGARMAEIKSIGDLA 1529 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + G + ++ L +E D + +DA Q+Q A + + + Sbjct: 1530 HELETLFERMTEGRLAPEPAMVGLVMECHDRLAGMVDAVAQNQVASPAR--DLIGRVHDM 1587 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE--------EE 178 A A V A E + + P+ + G + E EE Sbjct: 1588 AQGAGHHYADGEDDYIVDAHPEVEAAAETTSEPQVEETAEEPEGLAGIEEITAEPAPVEE 1647 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAE--DDITAVLCFVIEADQITFETVEVSPKISTPP 236 + D+ + L +I + E D L + + E+ + T Sbjct: 1648 APIENPVYDISELDQELVSIFLEEANELVDSTARNLQSWLGELENIEHVKELQRALHTLK 1707 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIR---------VAVEKVDQLINLVGEL-----V 282 AE P G + E T R + + D+L +V + V Sbjct: 1708 GGARMAEIKPIGDLAHELETLFEGIVEGRFLAEPSLSDLMLACHDRLAEMVDSVTSNSPV 1767 Query: 283 ITQSMLAQRS------SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 + LAQ+ +L D ++ +++R + LQE+ + + +F Sbjct: 1768 RAANDLAQQVIKYCAQHDLAAKGAPDHEDTIAEIEREQQSLQEAALETSDEDLRSIF 1824 Score = 99.9 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 57/151 (37%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +EA+E+LA + + Q D L I RA H++KG G + L E Sbjct: 602 DEIVEIFVEEAEEVLATIHNYFPSFQSNPDDQVALAEIRRAFHTLKGSGRLVGATTLGEL 661 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +EN+L+ G + ++ L + + E ++ +K QE + Sbjct: 662 AWSVENMLNRVIDGSITATLEMFELLEGVINKLPELIERFKTGQEINDVEQFVAKAEALA 721 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRS 156 A E +A V K EP Sbjct: 722 AARRLSREKSAASDIDLSVPKEEPAPAPIEE 752 Score = 94.9 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 41/295 (13%), Positives = 100/295 (33%), Gaps = 14/295 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F EA +++ + + + + + R H++KGGA G + + + Sbjct: 1306 ELADVFLQEAQDIIQSSADVMQQWSQDLHNIALVQQLQRDLHTLKGGARLAGIPPIGDLS 1365 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+L + + + + NL L D + +D+ ++ + A + AL Sbjct: 1366 HELESLFEGIVEQRVTPDEEASNLSLLAHDTLAGMVDSVTATRTCNDAQ--DLIDALHAY 1423 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + V ++ +L + + +++E L Sbjct: 1424 LSGERSSEDEEDEGDEVSYDETSLPTMDFNEEEDIPVLEEVAPLDPEMVEIFLEEA---Q 1480 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 D+++ ++ + L + + E+ L+ E+ Sbjct: 1481 DIIQRTGETMHSWSEELGNLEHLKELQRDLHTLKGGARMAEIKSIGDLAHELETLFERMT 1540 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 GR+ + E + + +E D+L +V + Q+ +A + +L H Sbjct: 1541 EGRL-------APEPAMVGLVMECHDRLAGMVD--AVAQNQVASPARDLIGRVHD 1586 Score = 90.6 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 61/380 (16%), Positives = 124/380 (32%), Gaps = 57/380 (15%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F DE+ +++ + + + + R ++ GGA + Sbjct: 1818 EDLRSIFLDESRDIMDAVIDCFDRWKANPDNITPTKELVRDLQTLNGGAKLANIDSVHAL 1877 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 T + ++ G+ Q+ ++I L + + LD +Q ++P+ + + + L++ Sbjct: 1878 TEALTERMESVVDGKHQVPDELITLVDRSIRYIGRLLDQIEQLEQPEVPN--ELIRELKE 1935 Query: 126 L---ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV---------- 172 + E V + E +E S +R V Sbjct: 1936 VGSGDELPASEFALDVDPEILQVFVEEANELQASLEREFNDWTREPRNSVHADSMSRALH 1995 Query: 173 ---------------DLLEEELGHLTTLTDVVKGADS--------LSAILPGDIAEDDIT 209 DL +E + D D L L +I + Sbjct: 1996 TLKGGARLATLTNIGDLAQEIESIVKQAYDHKHELDDALRSEIEILFNRLKSEIGQVKNF 2055 Query: 210 AVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTG-----------RVEREKTTRS 258 EA+ E + P+ ++++ EQA + + R Sbjct: 2056 YSSQQEAEAEAAAAEAPKSEPEALAERMVQMQREQAVPAVKKEEPAKTEMQPAQPAAQRQ 2115 Query: 259 NESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 + ++RV+ +D L+NL GE IT+ +L Q+ S D ++ ++Q L+ Sbjct: 2116 TAAETVRVSANLLDNLVNLAGETSITRGLLEQQIS--------DFTYTLEEMQSTIDRLR 2167 Query: 319 ESVMSIRMMPMEYVFSRYPR 338 E + + M V R + Sbjct: 2168 EQLRRMDMETEAQVLFRMEK 2187 Score = 86.4 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 7/216 (3%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +EA E+L + Q+L + E L + RA H++KG G +++ E +EN Sbjct: 807 FVEEAAEVLDTIGQYLPSYLASYDNQEALIEVRRAFHTLKGSGRLVGATLVGELAWSVEN 866 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 LL+ G + ++ DI L I+ + ++ +K ++P + Y+ QA AK Sbjct: 867 LLNRIIDGAIFMSQDIGELMQAVTKILPDLVEDFKLRRKPSHNTQPYMDQA----HAIAK 922 Query: 132 GETPSAV---TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV 188 GE P + S A EP + + + + + T + Sbjct: 923 GEIPKPLKLDQDASATAAGEPTLDIDPALKDIFKAETESHLETLATFTAKAAANGEPTPI 982 Query: 189 VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 L G I + V+ ++ E Sbjct: 983 TDEISRAMHTLKGSANTAGIEPIATVVVPLEKFVKE 1018 Score = 60.2 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 2/161 (1%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 F E ++L D E+ L + E + + ++ GA G + E + Sbjct: 1092 QLINLFLTEGVDILLDAERILNEWSQDPNSKEDQHKLVTELTTLSRGAEVAGLEDVAELS 1151 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +E + A G + + D++ +D + + Q L L Sbjct: 1152 RALETAYELAEAGAANTDDRFFTIAKRGHDVLISMMDQVAAGLATQPDA--SLIQELYAL 1209 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL 167 A + V ++ VA+ E + + +L + Sbjct: 1210 AKPVESAPAEDVPPVAEVAEEESLAPAANAADDEIPLLDDV 1250 >UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHS1_BDEBA Length = 671 Score = 500 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 206/668 (30%), Positives = 343/668 (51%), Gaps = 32/668 (4%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +E+ +L E++++ L+ A+ L IFR AHS+KGGA G + L + H+ME Sbjct: 2 DFLNESAFMLEQYEEYMMRLENSEDPAKDLTDIFRVAHSVKGGAAAVGLADLCKFAHVME 61 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL---RQLA 127 +LLD R +N+ +I+L L++ D ++ ++ A +Q Q + + QL+ Sbjct: 62 DLLDLLRSRPELVNSTVISLLLQSGDELKNRVAALQQQQGGPWDPSALTAELIAITEQLS 121 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL-TTLT 186 +A + P D +++ + + DLL E L + Sbjct: 122 GKASKHAHAPAPSADEPKVEAPDDFFAQAPAAEASAGAEDDLINHDLLAELLAQMSPEDQ 181 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEAD-----QITFETVEVSPKISTPPVLKLA 241 ++ A L IAE A V A + E + K + K A Sbjct: 182 AEFHAKEAAEAALKTAIAEAAPVAEAEAVKTAPVLKVVETPVEASAPAAKAAPAAAAKPA 241 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A A +G N +++I+V +VD +++ VGELV+ ++ L + VN Sbjct: 242 AAAAASGSGGGNNKNAKNATSAIKVDTGRVDSVLDAVGELVVLKNQLVHDETVRSGVNLR 301 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + QL + R+L E +SIRM P++ +F + R+VRD++ L K V+L L+G TE Sbjct: 302 -LEAIVDQLDKAVRELYEKTLSIRMTPLKSMFIKIQRIVRDVSLTLDKPVDLQLIGEETE 360 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +++++ E + DPL HLVRNS+DHG+E E R GK + + +SA+ GGN+ I+++DD Sbjct: 361 VERTVFELLGDPLVHLVRNSMDHGVEKKELRQERGKPATAKVTVSAKQSGGNVIIDISDD 420 Query: 422 GAGLNRERILAKAASQGLTV----SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 G G+NR+++L KA +G ++ D++V IF PGFSTA++++D+SGRGVG+DV Sbjct: 421 GGGINRDKVLGKAIEKGFVPAGVDPASIPDEQVFQYIFYPGFSTADKISDLSGRGVGLDV 480 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK N+ K+ G + I SK G GTT R+ +PL+ AI DG+ V + +ILP++++ E ++ Sbjct: 481 VKSNLDKINGKINIYSKAGQGTTFRLTIPLSTAITDGIIVALDGARYILPIHSIREIVRV 540 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNV-----------------AGAKTEATQG 580 D ++G +V +RG LP++++ K + Sbjct: 541 LPKDYTNISGAGKVASIRGHLLPVIDVSKTLGSINWSLNKKDQQLAQRRENSLSARREET 600 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++VI++S + A VD ++GQ QVVVK + + + +P ++ A ILGDG LI++ AL Sbjct: 601 MLVIIESMTGQMAFPVDDVLGQAQVVVKPITTG-QDIPEVAGAAILGDGRTVLILEPGAL 659 Query: 641 QAINREQR 648 R Sbjct: 660 VNNVANGR 667 >UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Tax=Methanococcus vannielii SB RepID=A6UNQ8_METVS Length = 957 Score = 500 bits (1287), Expect = e-140, Method: Composition-based stats. Identities = 163/453 (35%), Positives = 279/453 (61%), Gaps = 8/453 (1%) Query: 191 GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV 250 +S D +ED+I ++ E + ET++ + S + L + Sbjct: 510 EGESAIIYYNSDSSEDEIREIILKTPEIIDTSVETLDFDHEDSVVEIKSLKIDSEKENLK 569 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 ++++ + +S ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L Sbjct: 570 KQQQAEAAKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNAVGRL 626 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 A +LQE VMS+RM+P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + Sbjct: 627 NMLATELQEEVMSMRMIPVGFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDEL 686 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 +PLTHL+RNSLDHGIE E R+ +GK+ G L L A + + I + DDG G+N + + Sbjct: 687 AEPLTHLIRNSLDHGIETSEDRIKSGKSEKGILKLIATRERDRVNIIIKDDGKGINPDFM 746 Query: 431 LAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 +GL +E ++D+E +IF PGFSTAE+V+DVSGRGVGMDVV+ ++ +GG Sbjct: 747 RKIVVKKGLYSKEEAEKLTDNEAVNVIFLPGFSTAEKVSDVSGRGVGMDVVRSKVESLGG 806 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 V ++SK G GT I + LPLT+AI+ + V++ +++ LPL +V++ + ++ + L G Sbjct: 807 SVSVKSKVGVGTEITLHLPLTMAIIQTLLVKLNSQIYALPLTSVLDVVSIQKDQIKNLEG 866 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 E ++ R LP++ L N G + + VV+++ + +++D++IG+ ++VV Sbjct: 867 QEAII-YREHLLPVIWLKDALNQYGTSS-SEGLYVVVVEKNKDKIGVILDEVIGRDEIVV 924 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 K L + V G++ ATILGDG VALI+D++ + Sbjct: 925 KPLTGILKNVNGLAGATILGDGKVALILDLNNI 957 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 1/124 (0%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVL 62 D+ + + F EA+E L + Q+++ L+ +AE +N IFR+AH++KG A T GF + Sbjct: 3 DMEQYKELFMTEAEEHLQSLNQNMVELENSPENAEEIINLIFRSAHTLKGSARTLGFEHI 62 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH ME++LD R G +++N +I++L + D +++ + + + + + Sbjct: 63 SSLTHHMEDILDYIRDGRIKVNREIVDLLFKCLDALEKMVSEVSEGENTTDVDVESLVTL 122 Query: 123 LRQL 126 ++ + Sbjct: 123 IKSI 126 >UniRef50_UPI00016C455D CheA signal transduction histidine kinase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C455D Length = 654 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 193/647 (29%), Positives = 308/647 (47%), Gaps = 27/647 (4%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + E DE L LL L+ E+L+ +FR H++KG +G G + Sbjct: 25 LFPDYLVECDEHLTGARNLLLALEANPGAARPERLDELFRHFHTLKGLSGIAGVGQAESV 84 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E L R+G LN + I ++ ++ + A ++ P + + Sbjct: 85 AHQLEEYLGAVRKGRAALNPEGIAALVDGVAALEAVI-AARRDNTPAPETGALAARLAAL 143 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 + A P + + P SR+ L A V++ T+ Sbjct: 144 TSASAGATAPPSPEPAPASETTGPAGGASRTWKVTFAPTPALAASGVNV--------GTV 195 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + ++ A + P FV+ + FE++ + + P+ + A Sbjct: 196 RERLRAAGQIVRAAP---VATPGGVSFTFVVTSSDPHFESLFAADGLGVEPLDR----PA 248 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML----AQRSSELDPVNHG 301 P E + S +RV + ++D+L+ VGEL IT++ L + + L Sbjct: 249 PVPADEPARVAPLAPSNVVRVDLTRLDELMRAVGELAITRARLDGALERVAQLLPAAERR 308 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L + + R RDL++ VM +R++P+ +F+R +VRDLA + G+ V+L L G STE Sbjct: 309 ELHETSLTVGRQLRDLRDGVMRVRLVPVRDLFARMRLVVRDLAREPGRGVDLVLTGESTE 368 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +DK ++ER+ DPL HLVRN++ HG+E +R AAGK + G + L A GG + IEV DD Sbjct: 369 IDKFVVERLADPLLHLVRNAVSHGLEPASERAAAGKPARGRIDLRAAAAGGAVVIEVEDD 428 Query: 422 GAGLNRERILAKAASQGLTVSENMSDD-EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G G++ ER+ A+A GL +D V LI APGFST + SGRGVGMDVV+R Sbjct: 429 GRGIDPERVFARARQAGLAPPGGWTDPGAVLDLICAPGFSTQDAADRASGRGVGMDVVRR 488 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 ++++GG +++ ++ G G + LPLTLAI D + V V + + P AV L Sbjct: 489 AVEELGGTLDLTTRPGRGARFAVRLPLTLAIADALIVTVGGQTYAAPQAAVRAVLAVEPD 548 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + L E + G LP++ L +F A A +++ G AL VD++I Sbjct: 549 AVTALENNELIRNHEG-VLPLLRLADLFG---APRPAGAFPALVVGEGRSALALGVDRVI 604 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G +VVV+ L +VPG++ AT LGDG LI+D L R + Sbjct: 605 GLREVVVRRLADPLVQVPGLAGATELGDGRAVLILDAPGLARYARTR 651 >UniRef50_C6P319 CheA signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P319_9PROT Length = 1739 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 184/652 (28%), Positives = 310/652 (47%), Gaps = 42/652 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 F +EA EL + + L + + D + + R+ H++KG A G L E Sbjct: 1001 EQLLPIFLEEAHELYPQIGRTLRAWREQPGDVQSGRNLQRSLHTLKGSARMAGAMRLGEL 1060 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH +E+ +D+A +LN ++ N D + ++ +Q Q+P AA + Sbjct: 1061 THRVEDRVDKAIA-SGELNAELWNELDNYLDRIGNAIEQLQQPQQPQAAPEQPVV----- 1114 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A E + + P A V A + ++ + L R+++ VD L E G ++ Sbjct: 1115 -ASEVQQQHPEAARTAPVQAL------EVGAERAMQAALLRVRSDTVDRLVNEAGEVSVA 1167 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + + ++ + + V + E + + Sbjct: 1168 RSRAE--------MELSALKNSVLDLTDSVNRLRKQLREIEIQAEGQMQARISVSGESAE 1219 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 +E ++ TR E T R E V + Q + N + Sbjct: 1220 KFDPLEFDRFTRFQEVT--RFMNESVHDV---------------QTVQQALLKNLAETEA 1262 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 ++ RDLQ+ +M+IRM+P + R R+VR +LGK+ L L G+ ELD+S Sbjct: 1263 ALTAQAHLNRDLQQGLMAIRMVPFASISERLYRIVRQTGKELGKRANLELSGTEVELDRS 1322 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E++ P HL+RN++ HG+E PE+R AGK ++G + LS + + E +DDGAGL Sbjct: 1323 VLEKMTAPFEHLLRNAVAHGLETPEQRELAGKEAIGEIRLSLRQESNEVVFEFSDDGAGL 1382 Query: 426 NRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 + R+ KA G+ E +SD+ LIF PG STA++VT++SGRGVG+DVV+ I Sbjct: 1383 DLARVRQKAVETGVVHEGEEISDESAMQLIFTPGLSTAQEVTEISGRGVGLDVVRSEITA 1442 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG +++ S+ G G I LPLTLA+ + VR + + LP + Q + A L Sbjct: 1443 LGGRIDVASELGHGLRFTIHLPLTLAVTKTLLVRAGSQTYALPSTMIENVQQLKPAALDA 1502 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQLIGQH 603 + + V + +G P+ L ++ A+ E V++L++G +R AL VD+L+G Sbjct: 1503 VYSQQYV-DWQGSRYPLYSLARMLGDDEAEIENQPHNPVLLLRAGDKRVALHVDELLGNQ 1561 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL-QAINREQRMANTAA 654 +VVVKN+ ++PGI+ AT+ +G+V LI++ A Q I +++A AA Sbjct: 1562 EVVVKNIGPQLARLPGIAGATVSANGTVILILNPIAFTQRIVVTRKIAKAAA 1613 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 99/304 (32%), Gaps = 12/304 (3%) Query: 14 DEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLL 73 +EA + + + L VL + RAAH++ G T G + E + +E L Sbjct: 757 EEAAGHVHALHEQLAVLHETESHIVTYD-FMRAAHTLAGVNRTMGLVQIAELAYALELWL 815 Query: 74 DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGE 133 +E +N I L + ++E + ++ + I A+ A Sbjct: 816 EERIDKPYVVNEQQIALIDQVVQRLEEMCAVVRDQRQEPQPQPELIALLQEDKAIVATEA 875 Query: 134 TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD 193 P + + + P P +I L +D E Sbjct: 876 APPELEAVPALEFEAP----LALPEPEEVIEPVLPEAALDFAIPEEAVPEAAEAPQTLEL 931 Query: 194 SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE 253 + A P + + I+ + + P+ + + E+ P + + Sbjct: 932 PVPAAEPESVTAEGISETGLEIPSIPGLPEVAEARGPEAAQESPVATTDEEEPVLPLPQR 991 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGEL--VITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 + +E V + + + EL I +++ A R D + +L S+ L+ Sbjct: 992 EREVHDE-----VDEQLLPIFLEEAHELYPQIGRTLRAWREQPGDVQSGRNLQRSLHTLK 1046 Query: 312 RNAR 315 +AR Sbjct: 1047 GSAR 1050 Score = 62.9 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 63/167 (37%), Gaps = 6/167 (3%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E++ + +L + + E L + R H++KG G + L E +E +++ Sbjct: 594 AREVMETLRSNLEISRLHMDSREPLVTMRRGFHTLKGSGRMVGLTELGEVAWAVERAMNK 653 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETP 135 + ++++ + + + Q +D Y+ L +E E P Sbjct: 654 WLQENKPATPVLLDMIGDAEVLFQHWVDMLSSGSTNATIDTSYLL--LVADCIENGKEVP 711 Query: 136 ----SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + +V+ +P++ +S + P I L ++ EE Sbjct: 712 QTRTEPAMQEAVIETQQPEEAESEEERPVEIGSVSLSPALFNIATEE 758 >UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococcus RepID=Q9UYF4_PYRAB Length = 772 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 155/382 (40%), Positives = 249/382 (65%), Gaps = 9/382 (2%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 +T R S I++ V +D+L+NLVGELVIT+ L Q L +L ++ L R Sbjct: 382 ETPRVKISRIIKIDVGHLDKLMNLVGELVITKGRLEQIGERL---GDRELFEALSTLSRL 438 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 +LQ+ +M +R+ P+ VF+++PR+VRDLA K+GK+VE + G+ E+D++++E++ D Sbjct: 439 LTELQDEIMEMRLTPIAEVFNKFPRMVRDLARKMGKEVEFVMEGADIEVDRTILEKLGDA 498 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HL+RN++DHGIE PE+R+ GK VG + L A+ + ++ I V DDG G++ E++ K Sbjct: 499 LVHLLRNAVDHGIEPPEERVKLGKPRVGRVELIAKREKNHVVIIVRDDGRGIDPEKVKKK 558 Query: 434 AASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 A +GL E +SD+E LIF PGFSTAE+VTDVSGRGVGMDVVK ++ M G + Sbjct: 559 AIERGLITPEEAASLSDEEAINLIFLPGFSTAEKVTDVSGRGVGMDVVKEVVKSMNGSIS 618 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 +Q++ G GTT + LP+++AI+ + +RV DE + +P+N ++E+++ + L + GG+ Sbjct: 619 VQTEVGKGTTFILKLPISMAIIQALLIRVMDETYAIPINNILETIEVDPSILKTI-GGKP 677 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 V+ +RGE +P+V L ++F + + E + +I+ G ++ A+ VD+L+ + +V+K+L Sbjct: 678 VIVLRGEIIPVVMLHELFGLPTPQVE--RFPAIIVDHGAQKVAIGVDELLHKRDIVIKSL 735 Query: 611 ESNYRKVPGISAATILGDGSVA 632 V G + ATILGDGSV Sbjct: 736 GKFLSNVRGFAGATILGDGSVV 757 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 7/132 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGAGT 56 D+S + F +A + + + +L L+ E AE +N IFR AH++KG A T Sbjct: 6 DMSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKAELINQIFRDAHTLKGTAAT 65 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 GF L ET H MENL D R +++L ++++L L+ D ++ ++ ++S Sbjct: 66 MGFMKLSETAHKMENLFDAIRNSQIELTPEVVDLVLDFLDAIEAMVNNIEESGSEGDIDV 125 Query: 117 DYICQALRQLAL 128 + + + Sbjct: 126 SDLFRRADEFLQ 137 >UniRef50_B8GP53 Putative CheA signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GP53_THISH Length = 1974 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 186/687 (27%), Positives = 313/687 (45%), Gaps = 52/687 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +E E+L + L + D + I R H++KGGA G + + + Sbjct: 1148 ELVDIFLEEGGEILDASDNLLESWRHNLNDQGIIAEIQRQLHTLKGGARMAGLRPIGDLS 1207 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ----- 121 H +E L+ + G Q ++++ ++ D + QL+ ++ + A D I + Sbjct: 1208 HALETLVIDITEGRGQAQPAMLDVVAQSLDTLSRQLEQARRRESLITAP-DLIARLSGFK 1266 Query: 122 --ALRQLALEAKGETPSAVT-RLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 A A P V+ + A+S +DE + P RL E+ E Sbjct: 1267 AGEAEAPAERAAPSVPETVSITEEIPAQSPVEDEIVIEEIPVDEASPRLSVDELPDETLE 1326 Query: 179 LGHLTTLTDVVKGADSLSAI---------------LPGDIAEDDITAVLCFVIE-----A 218 L + + D ++ V V++ A Sbjct: 1327 LVEEPGYGGGEPTLTEIPEVSAAAPAEEPARAGARAAADSGPQELVRVRSEVLDNLVNYA 1386 Query: 219 DQITFETVEVSPKI------------------STPPVLKLAAEQAPTGRVEREKTTRSNE 260 ++ + +I L++ E R E+EK + Sbjct: 1387 GEVNIYHARLEQQITGFRFNLGELSQTVTRLREQLRKLEMETEAQILFRYEQEKQDHEID 1446 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + + +++ + L L + + L L D T + Q R + DLQE Sbjct: 1447 ADFDPLEMDRYSNIQQLSRALAESINDLVSIQDILSD-QVRDSETLLLQQSRVSTDLQEG 1505 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 +M RM+ + R R+VR A +LGK+VEL + G +ELD+S++ER++ PL H++RN Sbjct: 1506 LMRTRMVQFSNMVPRLRRVVRQTATELGKRVELDIQGEGSELDRSVLERMVSPLEHMLRN 1565 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++ HGIE +KR A GK G++ + +G + I V+DDG G+N + + +KA GL Sbjct: 1566 AVYHGIESADKRRATGKADAGHIDIQVTREGSEVVIRVSDDGGGINLDAVRSKAMRLGLI 1625 Query: 441 V-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E ++D+++ I GFSTA++V+ +SGRGVGMDVV I+++GG + I++ G GT Sbjct: 1626 KGDEALTDEDIMQFILESGFSTAQEVSQISGRGVGMDVVNSEIKQLGGTLGIETVPGKGT 1685 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL-HPLAGGERVLEVRGEY 558 + LP TLAI + V+V ++++ +PL+++ ++ R DL + G Sbjct: 1686 RFTVRLPFTLAINQALLVQVGEDIYAVPLSSIEGIVRARAGDLARYYEEANPTYDYAGNT 1745 Query: 559 LPIVELWKVFNVAGAKTEATQG--IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 + L + V+ A+ V++++SG R AL VD L+G +VV+K++ K Sbjct: 1746 YEVKHLGALLEVSQPNLHASDVMYPVLLVRSGDHRIALHVDGLLGSREVVIKSVGPQVAK 1805 Query: 617 VPGISAATILGDGSVALIVDVSALQAI 643 V GIS ATILGDG V LI+DV AL I Sbjct: 1806 VRGISGATILGDGRVVLILDVPALVRI 1832 Score = 74.5 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 86/267 (32%), Gaps = 8/267 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +E E + + ++L + D E L + R+ H++KG G +L E Sbjct: 656 EEIKEIFLEETTEEIERISEYLPRWRENPADQEALTTVRRSYHTLKGSGRLVGALLLGEF 715 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA--- 122 MENLL+ + + + E ++ + + + ++ + +A Sbjct: 716 AWSMENLLNRIIDQSVSPGPAVYAVLGEALRMLPVLRGQIEGGEGDEPGTYALMARAHAL 775 Query: 123 -----LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 A ++ E + + + +IL R + Sbjct: 776 ARGETAPARAAPPALAPVEPPVSAALAEAPEASEPEISGEVVPTVILDREDLDFSSPDVQ 835 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 T L+ D+A + T ++ E ++V Sbjct: 836 APVTAETGPQADDTLTGLAVEGGFDLALEPGTDEDTLAQGETGLSLEDLDVGAAAEELNA 895 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSI 264 L+ + + E++T + E+ ++ Sbjct: 896 LEPLEGEFGSLETPPEESTLTFETEAL 922 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 88/267 (32%), Gaps = 9/267 (3%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 ++ F +EA + L + L E +A+ RA H++ G A T + E Sbjct: 982 LFEIFRNEATQHLNTLRSQLEGASREDGGMPVTDALLRAVHTLNGAARTAEVPEIFEVCA 1041 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E + E + + F + + ++A + ++P S + + + ++ + Sbjct: 1042 PCERYVKARADTEAFVPGAALPGFWSLIEHVSGVIEALGRGEDP-LPSGERLAEDMQAML 1100 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 E + + + + + + + E D ++ L + Sbjct: 1101 DEELARQERVRQEEARQSAAALAAAAAAAVPAQPAPTEAVTYDEQDQELVDI-FLEEGGE 1159 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 ++ +D+L ++ + I A + + + + P L+ Sbjct: 1160 ILDASDNLLESWRHNLNDQGIIAEIQRQLHTLKGGARMAGLRPIGDLSHALETLVIDITE 1219 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQL 274 GR + + + V + +D L Sbjct: 1220 GRGQAQPA-------MLDVVAQSLDTL 1239 >UniRef50_A4VRH0 Probable component of chemotactic signal transduction system n=2 Tax=Bacteria RepID=A4VRH0_PSEU5 Length = 2444 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 183/641 (28%), Positives = 304/641 (47%), Gaps = 13/641 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EAD+LL +ME L DA L + R H++KGGA G + L Sbjct: 1655 AEILDIFVEEADDLLEEMESALGRWDAGREDAAPLADMLRVLHTLKGGARLAGQTALGNM 1714 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E L EA++ + + D + + ++ + S D+A Y + Sbjct: 1715 AHDLEQRLSEAQQQGAPWPDSLFLDVQQGYDALLKDVEQLRDSLASDSAEPLYSEPQHAE 1774 Query: 126 LALEAKG--ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 L P + + V A S+P + ++ I ++ A E + Sbjct: 1775 LQETESPLPSEPLTLPQPIVAASSQPAPSAAPAKVLPFIRRAQQAAQEAAARRAPQELVK 1834 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 ++++G +L V V + E ++ Sbjct: 1835 VPAELLEGLVNL-----AGETSIFRGRVEQQVSDVGFTLGEMEATIERVRDQLRRLDTET 1889 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 QA + + R+ + +++ QL L L + S L L + D Sbjct: 1890 QAQILSRYQAEAERAGYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETL-AARNRDA 1948 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 T + Q R +LQE +M RM+P E + R R+VR +AG+LGKQVE + ++ E+D Sbjct: 1949 ETLLLQQARVNTELQEGLMRTRMVPFERLVPRLRRIVRQVAGELGKQVEFLVGNATGEMD 2008 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 +S++ERI+ PL H++RN++DHGIE E+R AAGK+ G + L +GG+I + +TDDG Sbjct: 2009 RSVLERIVAPLEHMLRNAVDHGIESVERRRAAGKSEQGTIRLDLAREGGDIVLTLTDDGG 2068 Query: 424 GLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 G+N E + KA +GL +++ +S+ E+ I GFSTAE+VT +SGRGVGMDVV + Sbjct: 2069 GINLEAVRRKAIERGLMSADSGLSEHEILQFILEAGFSTAERVTQISGRGVGMDVVHSEV 2128 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +++GG + I+S G GT I LP T+++ + V ++++ +PLN + ++ +L Sbjct: 2129 KQLGGSMSIESTLGQGTRFLIRLPFTVSVNRALMVYSGEDLYAIPLNTIEGIVRVSPYEL 2188 Query: 543 HPLAG-GERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVDQ 598 E G+ + L + N ++ V++++S A+ VD Sbjct: 2189 EAYYQPDAPRFEYAGQAYELRYLGDLLNNGQKPKLVGQSLPLPVILVRSKEHSVAVQVDS 2248 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 L G ++VVK+L + V GIS ATILGDG V +I+D+ A Sbjct: 2249 LAGSREIVVKSLGPQFAGVHGISGATILGDGRVVVILDLLA 2289 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 76/193 (39%), Gaps = 5/193 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +E +L+ L + ++ +L A+ R H++KGGA + + Sbjct: 1509 ELVEIFLEEGFDLIESAAGGLQRWMADVDNSFELEALQRDLHTLKGGARMADIREIGDLA 1568 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + G + ++++ L +D + E L+A + S D + + +R+ Sbjct: 1569 HELEFLYEGLCAGSYRASSELFGLLQACQDRLAEMLEAVRAHNPI--PSGDALIETIRRF 1626 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + + SV K+ +D Q +++ I ++ +E LG Sbjct: 1627 RNNPEEQLS---IPSSVSLKAAQEDAQQSAEAEILDIFVEEADDLLEEMESALGRWDAGR 1683 Query: 187 DVVKGADSLSAIL 199 + + +L Sbjct: 1684 EDAAPLADMLRVL 1696 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 85/271 (31%), Gaps = 5/271 (1%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D + F +EA E+L + ++L + D + L + RA H++KG ++ E Sbjct: 750 EDLLEVFIEEAAEVLETIGEYLPRWFSDGDDKDALGEVRRAFHTLKGSGRMVRALIIGEL 809 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +ENLL+ + + + + ++M ++ + + D + Sbjct: 810 AWSIENLLNRVLDRTIVAGDSVRQVVRDVVELMPALVEEFAAKAQRQRDDVDRLAATAHA 869 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 LA P V + + + + + +L +D + L Sbjct: 870 LAKGQPVALPQPVAEVVEAFVPDVDPQPAPIAEAPQAVLPENDDDALD--PQLLEIFRNE 927 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + +T L + + + + P L+ ++ Sbjct: 928 AESHLTTLVSFLADCAQRLPQPVTDALQRALHTLKGSAHMAGILPVAEIATPLEKMVKEF 987 Query: 246 PTGRVEREKTTRS---NESTSIRVAVEKVDQ 273 T ++ + + +R + +D Sbjct: 988 KTNLIQMDLAEAELLHEAESLLRQGLVNLDH 1018 Score = 91.4 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 104/314 (33%), Gaps = 9/314 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F DEA +L+ Q L + + L+A+ R H++KGGA + + Sbjct: 1266 EMVEIFLDEAVDLMESAGQALDRWLADPANQMALSALLRDLHTLKGGARMASIRPIGDLA 1325 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+L + G + ++ L + D L + ++ + D + +++R Sbjct: 1326 HELESLYEGLSDGRYVHSVELATLLQRSHDH--LALQLEQLQRQLPMSCADTLIESMRAF 1383 Query: 127 ALEAKG--ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A E V ++EP + + + + EV L + Sbjct: 1384 RQGAFPAFEAEDVVAEAQPAQRNEPHTFEEPLEGAFDAVPDQPPVMEVIDLPLADVDESF 1443 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 ++ + L + + + + L + + + EV+ + E Sbjct: 1444 TSEEAEAVSPLEDVEATEASFSEAQDELELELPEIEDAPASFEVAADAPRAEAVDRQPEL 1503 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 E + I A + + + V L +L + G + Sbjct: 1504 VDRDP-ELVEIFLEEGFDLIESAAGGLQRWMAD----VDNSFELEALQRDLHTLKGGARM 1558 Query: 305 TSMGQLQRNARDLQ 318 + ++ A +L+ Sbjct: 1559 ADIREIGDLAHELE 1572 Score = 41.7 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 51/181 (28%), Gaps = 78/181 (43%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +EA+ L + L P +A+ RA H++KG A G + E Sbjct: 919 QLLEIFRNEAESHLTTLVSFLADCAQRLPQPVT-DALQRALHTLKGSAHMAGILPVAEIA 977 Query: 67 -------------------------HLMENLLDEARRGEMQLN----------------- 84 H E+LL R+G + L+ Sbjct: 978 TPLEKMVKEFKTNLIQMDLAEAELLHEAESLL---RQGLVNLDHEPLAPIEGAPAFLAKV 1034 Query: 85 --------------------------------TDIINLFLETKDIMQEQLDAYKQSQEPD 112 ++ +++ L+ +D++ + + QE Sbjct: 1035 HALHQARLVEAGARQQNDAGEARDPSMIALFLSEGMDILLDAEDLLHSWREHPAERQELS 1094 Query: 113 A 113 A Sbjct: 1095 A 1095 >UniRef50_Q3BQK3 Two-component system sensor histidine kinase-response regulator hybrid protein PilL n=5 Tax=cellular organisms RepID=Q3BQK3_XANC5 Length = 2405 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 179/648 (27%), Positives = 300/648 (46%), Gaps = 30/648 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +E +LL + + ++ D + LN + R H++KGGA G + + + Sbjct: 1640 ELVDIFVEEGRDLLDHCDGLIARMREVPGDRDVLNGLQRDLHTLKGGARMAGINAIGDLG 1699 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+LL+ ++ D + LF D + + L + + +A Sbjct: 1700 HAIESLLEAVAANRTDIDRDDVRLFERGFDRLHQLLT--RTGMHRAVTMPTDLVEAFETR 1757 Query: 127 ALEAKGETPS-----AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 PS A+ + SV Q+ L R++ +V + + L Sbjct: 1758 TRGRNAAPPSDADVRAIAKASVEPAPLSAPVPVEGQA-EEDFLPRVQQEQVRVRADLLDR 1816 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 L V S G DQ+ +E +I + Sbjct: 1817 LVNHAGEVAIYRSRLEQQLGAFRGAMGELDRTNARLRDQLRRLDLETEAQIVARYQREQD 1876 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 +E ++ + + + L +L Q +L S + D + Sbjct: 1877 QGDRTFDPLELDRFSTLQQLSR---------ALNESAADLGGLQGVLEDLSRQYDGL--- 1924 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 + Q R + +LQ+ +M RM+P + + R R+VR A GKQV L L G+ E Sbjct: 1925 -----LQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAASDTGKQVHLVLEGTQGE 1979 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+++++R++ PL H++RNS+ HG+E PE+R AGK G++ + +G I +EV DD Sbjct: 1980 LDRNVLDRMVAPLEHMLRNSVAHGLETPEQRRDAGKPEEGSIAIRLRREGSEIVLEVADD 2039 Query: 422 GAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 GAGL+RE I + +GL + +S+ E+ LIFA GFST+EQV+ ++GRGVGMDVV+ Sbjct: 2040 GAGLDREAIRRRGEERGLIEPGQELSEAELDNLIFASGFSTSEQVSQLAGRGVGMDVVRN 2099 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 ++++GG V+I S +G G T + LP TLA+ + VR+ + F +P+ +V + A Sbjct: 2100 EVRQLGGSVDIHSVRGQGATFTLRLPQTLAVTQAVFVRIGETTFAVPVGSVSGIGRISRA 2159 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQL 599 GG GE + +L + A A+ + Q ++++++G R A+ +DQ+ Sbjct: 2160 RYESGEGG---YHYAGEEYVLHDLGSLVGQAAARADGQAQVPLLLVRAGDLRAAVAIDQV 2216 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +G +VVVK + VPGI ATI GDG V +I+DV+ L Q Sbjct: 2217 LGNREVVVKPVGLQIASVPGIYGATITGDGRVVVILDVAPLVRRFLAQ 2264 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 87/276 (31%), Gaps = 10/276 (3%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +E DE L ++ Q L V + + E L I R H++KG G SVL E + +E Sbjct: 740 VFLEEFDEELVNLGQLLPVWRAAPTNPEALRPIRRVFHTLKGSGRLVGASVLGEFSWKIE 799 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYICQALRQLAL 128 ++L+ + ++++ +++ + A + D I + + Sbjct: 800 SMLNRVLDNSRPASPAVVSMVELAYEVLPQFNAALRDQGRISADLPEIQGIAERVAAGEE 859 Query: 129 EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV 188 +A +V + S + S L+ + L + Sbjct: 860 VYYVPAAAAPVAEAVAIPAAAAGVFVASGGTPASVDSVLREILEAEVATHLDTVNGWLHA 919 Query: 189 VKGADSL--------SAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + L + G A D+ + A+ + S S + L Sbjct: 920 SQAEPQLATEDVLRAVHTMSGAFAMTDVPEITLVTTPAESYVKRLLAASVTPSAEGLEAL 979 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 A A + S E++ L++ Sbjct: 980 TATAAAIATTVTALRADAPLIPSFAPLTERLRTLVD 1015 >UniRef50_C5BLL4 Putative CheA signal transduction histidine kinase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLL4_TERTT Length = 2283 Score = 497 bits (1281), Expect = e-139, Method: Composition-based stats. Identities = 176/660 (26%), Positives = 293/660 (44%), Gaps = 27/660 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D F +EADEL+ +++ + + + D Q I R H++KGGA G + L E T Sbjct: 1475 DILDIFLEEADELIEQLDEAVHAWEGDWSDLSQAEEIKRVLHTLKGGARLAGMTNLGELT 1534 Query: 67 HLMENLLDEARRGEMQLNTDII-------NLFLETKDIMQEQ----LDAYKQSQEPDAAS 115 H E+ L +++ + L +Q LD+ + S + A Sbjct: 1535 HNYESFL--IGSKLQEVDEPFFRTMHSYQDQVLSGVRAIQAFVAGDLDSAQASADVPAEV 1592 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS-PRRIILSRLKAGEVDL 174 + ++ G + ++ A + + S P GE + Sbjct: 1593 TAEVTAEVQPGDASVSGAEVEEIPPVADAAPLQTVTPAAESNVVPFAPKPKAPDVGEFTM 1652 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 + ++ E+ + I +I + + S + Sbjct: 1653 PSPAATPGGQAIARKPSGPQEVIKVSAELLEELVNLAGETSINRARIEQQVSDFSNSLDD 1712 Query: 235 PPVLKL-AAEQAPTGRVEREKTTRSNESTSI------RVAVEKVDQLINLVGELVITQSM 287 EQ +E E + + +++ L L L+ + S Sbjct: 1713 IDSTLFRLQEQLRRLDIETEAQVLFRQEQMAAHEDFDPLEMDRYSHLQQLSRSLIESASD 1772 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 L L N D T + Q R LQE +M RM+P + R R+VR ++ +L Sbjct: 1773 LIDLRETLTD-NIRDTETLLLQQSRINTTLQEGLMRSRMVPFSRLVPRLRRIVRQVSSEL 1831 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK V L ELD+S++ER++ PL H++RN++DHGIE P+ RL AGK+ G ++L+ Sbjct: 1832 GKSVSFELDNVEGELDRSVLERMVPPLEHMLRNAVDHGIEAPDDRLGAGKSETGRIVLTL 1891 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVT 466 +GG++ I + DDG G++ R+ KA +GL ++ +SD +V I GFSTAE+VT Sbjct: 1892 GREGGDVIIRLADDGRGIDLRRVREKAIERGLMSADAGLSDFDVMQFILHAGFSTAEKVT 1951 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 +SGRGVG+DVV I+ +GG V I S G GT + LP T+++ + V + + + + Sbjct: 1952 QISGRGVGLDVVTSEIKALGGSVTIDSAWGKGTEFIVRLPFTVSVNRALMVEIGQDTYAI 2011 Query: 527 PLNAVMESLQPREADL-HPLAGGERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIV 582 PLN + ++ +L H + E GE + L + + + A V Sbjct: 2012 PLNTIEGIVRVSPFELEHYYTTEDARFEYAGENYQVRYLGSMLSNDILPQLDGHALPLPV 2071 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 ++++S A+ VD L+G +VVVK+L + V G+S AT++GDGSV +I+D AL Sbjct: 2072 LLVRSADNAMAVQVDNLLGSREVVVKSLGVQFSAVQGLSGATLMGDGSVVVILDPHALMR 2131 Score = 64.8 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 106/308 (34%), Gaps = 15/308 (4%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E+ ++++ + D + L + RA H++KG + E +EN+L+ Sbjct: 629 AGEVRETLDEYFPKWRANFQDQDSLVVVRRAFHTLKGSGRMVEAYDIGELAWSIENMLNR 688 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE-AKGET 134 + + ++ ++ + A+++ + +C+ A A G+T Sbjct: 689 VIDNTVNVGPAHGHMIELVLHVLPVLVTAFERRKR---NPQKALCEQYMAWAESLAAGDT 745 Query: 135 PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 P+ + SV PQ + + + + + E + D Sbjct: 746 PAEL--ASVPDGGHPQLPDLTAPPKKVVAAEQQQEPAAAEPETQADISGDEDDSDNENLV 803 Query: 195 LSAILPGDIAEDDITA---VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 L I + T + +A + + + + T A+ P + Sbjct: 804 LWEIFSSEAHSHLATMNAFIAKMEADAPLYSPPSDDFQRALHTLKGSAKMAQVTPIAAMA 863 Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 + E S +V + + ++ L + V S AQ ++L+ + ++ + Q Sbjct: 864 EPLEAFAKELISYQVDIN--EDILQLYRDAV---SYTAQALTQLEAGENLEIRQ-LDQFV 917 Query: 312 RNARDLQE 319 +L+E Sbjct: 918 ARTAELRE 925 Score = 62.1 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 1/127 (0%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF-RAAHSIKGGAGTFGFSVLQETT 66 ++ F EA LA M + ++ +AP + F RA H++KG A + + Sbjct: 804 LWEIFSSEAHSHLATMNAFIAKMEADAPLYSPPSDDFQRALHTLKGSAKMAQVTPIAAMA 863 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +E E ++ +N DI+ L+ + + L + + + D +L Sbjct: 864 EPLEAFAKELISYQVDINEDILQLYRDAVSYTAQALTQLEAGENLEIRQLDQFVARTAEL 923 Query: 127 ALEAKGE 133 A G Sbjct: 924 RELAVGH 930 Score = 58.7 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 55/276 (19%), Positives = 96/276 (34%), Gaps = 32/276 (11%) Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK---QSQEPDAASFDYICQALRQLAL 128 LLD + + DI+++FLE D + EQLD + D + + I + L L Sbjct: 1461 LLDTIDVNDEDFDQDILDIFLEEADELIEQLDEAVHAWEGDWSDLSQAEEIKRVLHTLKG 1520 Query: 129 EAK-------GETPSAVTRLSVVAKSEPQDEQ-------------SRSQSPRRIILSRLK 168 A+ GE + +K + DE S ++ + + L Sbjct: 1521 GARLAGMTNLGELTHNYESFLIGSKLQEVDEPFFRTMHSYQDQVLSGVRAIQAFVAGDLD 1580 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 + + +V G S+S +I A L V A + Sbjct: 1581 SAQASADVPAEVTAEVTAEVQPGDASVSGAEVEEIPPVADAAPLQTVTPAAESNVVPFAP 1640 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 PK + + A G + S I+V+ E +++L+NL GE I ++ + Sbjct: 1641 KPKAPDVGEFTMPSPAATPGGQAIARKP-SGPQEVIKVSAELLEELVNLAGETSINRARI 1699 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 Q+ S D S+ + LQE + + Sbjct: 1700 EQQVS--------DFSNSLDDIDSTLFRLQEQLRRL 1727 Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 41/118 (34%) Query: 13 FDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENL 72 +E DE L + Q L ++ DA ++ H + G F ME+L Sbjct: 14 IEEIDETLKEARQALESFVEDSKDATKMRFCLTYIHQVHGSLQMVEFHGASLLAEEMEHL 73 Query: 73 LDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA 130 ++ + + + + + LD K +E + + LR + ++ Sbjct: 74 AQALMDNKVTSVPEAQEVLMRSLLQLPTYLDHVKAHKEDNPGLVLPLLNDLRAVRNQS 131 >UniRef50_Q46Y03 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46Y03_RALEJ Length = 1956 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 170/658 (25%), Positives = 294/658 (44%), Gaps = 39/658 (5%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F +EA L ++ + + + DA Q + RA H++KG A G L + H Sbjct: 1157 LVEIFLEEAHGSLPELGRLVRTWEAAPEDARQGGLVLRALHTLKGSARMAGAMALGQAAH 1216 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI-------- 119 ME LLD + R + + + D + ++A + + D I Sbjct: 1217 EMETLLDASLRAQR-IGPQLFGRLYAWYDRILMHVEALQAGRLLVPDDADLINGIGQSEQ 1275 Query: 120 -CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + K E+ + V Q + R+ L R++A +D L E Sbjct: 1276 PATPVMASVAPPKPESAGTALPVPAVGAPAGAAVQPSDATERQRALVRVQARALDTLINE 1335 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 G + ++ G++ ++ + +E+ + + Sbjct: 1336 AGEVGATRARLESELDSMRAYLGELNDNVARL---------RGQLREIEIQAESQMASRI 1386 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 A ++ +E ++ TR E T R+ E V+ + + + Q Sbjct: 1387 ADAQQKQDFDPLEFDRFTRFQELT--RMMAESVNDV-----------ATVEQNLHRGFDR 1433 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 GDL R R LQ +M RM+ + + R R+ R A + GK+V L + G Sbjct: 1434 TAGDLAA----QARLTRGLQRGLMQARMVQFDALAERLYRVARQAAAETGKEVRLLIQGG 1489 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 + E+D+S+++R+ P+ HL+RN++ HGIE + R AAGK + G+L L + +G + + Sbjct: 1490 TVEIDRSVLDRMAGPIEHLIRNAVVHGIEKSDARRAAGKPAAGSLTLEVQQEGNEVVLHF 1549 Query: 419 TDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDGAGL+ RI A+A + L ++ S+ + +IFAPGFSTA+ V++++GRGVGMDV Sbjct: 1550 VDDGAGLDLARIRARAVERSLLAQDDDASEARLTEMIFAPGFSTADAVSELAGRGVGMDV 1609 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ +GG + + + G GTT + LPLT AI + V + ++ +P + + Q Sbjct: 1610 VRAETVALGGRITLSTTAGRGTTFTVHLPLTTAITQVLVVMLGGRIYAMPSGMIDQVQQL 1669 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLV 596 R L A + + V G +P + + A + VVI++SG R A+ V Sbjct: 1670 RTQALLD-AYNQGQIAVAGHVVPFYYFGGLLEESAASPSGRKYSPVVIVRSGSERVAVHV 1728 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 D+++G +VVVK++ + ++ GI+ AT +GDG + LI + L R A Sbjct: 1729 DEVVGNREVVVKHIGPHLARLEGIAGATTMGDGEIVLIYNPVVLAQRFERVRGEAAPA 1786 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 50/324 (15%), Positives = 103/324 (31%), Gaps = 31/324 (9%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + ++ F +EADE+L + L D + L+ I RA H++KG + G + Sbjct: 744 ELFEIFLNEADEVLGGIAGDLGSGLEALGDTDTLSRIRRAFHTLKGSSRMVGLHRYGDAA 803 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +E +++ ++NL + + + + A Sbjct: 804 WAVEQVMNLWLAEARAPVPALLNLLRRAHAELSAWVALLHRDAGAAHDIAPLVAAAEAVR 863 Query: 127 ALEAKGETPSAVTRL-SVVAKSEPQDEQSRSQSPRRIILSRLKAGE-------------- 171 + + + +AVT V P + + P L++ A + Sbjct: 864 DPQPEADATAAVTEPRHAVPDDAPMPDVQIAGPPDTDPLTQPHATDDGNVIPFRLSGALS 923 Query: 172 -----VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 ++ L ++ AD L DI+E C E T+ Sbjct: 924 DADDNFKVIGPIRIGLPLYNVYLQEADDLLRQFATDISEWRHENHPC-PSELALRVAHTL 982 Query: 227 EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 + S ++ AE ++ + R+ + V++L + Sbjct: 983 QGSASTVGLEPVREIAEALEHLLLQLGSHPVAMHPGDFRLLEQSVERL----------RG 1032 Query: 287 MLAQRSSELDPVNHGDLITSMGQL 310 ML Q ++ + P L S+ + Sbjct: 1033 MLHQFAAGIWPEADAGLHRSLSEF 1056 >UniRef50_A3ZQH0 Chemotaxis protein CheA n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQH0_9PLAN Length = 1014 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 202/788 (25%), Positives = 334/788 (42%), Gaps = 151/788 (19%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAA----HSIKGGAGTFGFSV 61 + + F DE + + ++ L+ + D+E A+ R H IKG A + G + Sbjct: 226 AKYVSIFIDETEMAVDELSDILVSI-----DSEVAEAVTRTLLVTSHRIKGSAASIGLNR 280 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 H+ME++L E R ++ ++ + L D + + K+ + Sbjct: 281 PARLAHVMEDILQEIRDDGGVVSGELADALLPCIDGFRVYVQELKEGACKTDSFEQLTID 340 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR-----------------IIL 164 L + + + ++ S +P R + L Sbjct: 341 LLMAWRGRESATPHFELPPVHASLPMPSSEAETTSLAPDRNFDDEEGYSIDLTFDQNLPL 400 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI--LPGDIAEDDITAVLCFVIE----- 217 S LKA + +G + + D L + L +++ D+ L +++ Sbjct: 401 STLKAQLLLEKVSRVGEVHDSAPTYEELDHLEHVGRLKIEVSTDESLESLYSLVDVSGVV 460 Query: 218 -----------ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT----------- 255 + E E P+ P + A ++E Sbjct: 461 SAKIIPKVAAAQPECPVEAAEPPPQKVEPQAVAPAPPTPQVAKIEPTPAVPASPTKVAAA 520 Query: 256 ---------------------TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 + S + ++RV +E++DQL+NL G+LVI ++ Q S Sbjct: 521 APKPPSPAASPGAAARPKGVDSSSKPAETLRVDIERLDQLMNLAGQLVINRARFEQLSDG 580 Query: 295 LDPVNHGD-------------------------------------------LITSMGQLQ 311 L L + + Sbjct: 581 LRDALPHKSAQHKMNNACSLSSKLLQMVDSIDERSAKGQGEWNAIKSHVRMLNADLESIS 640 Query: 312 RNA----------RDLQESV--------------MSIRMMPMEYVFSRYPRLVRDLAGKL 347 R +L E+V M RM+P+ +F R+ R+VRD++ Sbjct: 641 RETGRYQAMRIRSNELHEAVHQLERVSDGIQKCVMDTRMVPIGPLFGRFKRVVRDVSRTN 700 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK++ L + G TELDK +I+ + DPL H+VRNS DHGIE PE R+A GK+ G + L A Sbjct: 701 GKEIRLDISGEKTELDKRMIDELGDPLIHMVRNSADHGIESPEVRVANGKSPQGTIKLDA 760 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQ 464 H+G +I I+VTDDG GL+ IL KA +G+ ++ MS+ ++ LI+ PGFSTAE+ Sbjct: 761 FHRGNSIIIQVTDDGKGLDPTLILRKAIDRGIVDPAEADKMSNQQIFQLIWEPGFSTAEK 820 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 +T++SGRG+GMD+V+ I+ + G VE+ S G G T I LPLT+AIL + R+ E F Sbjct: 821 ITEISGRGMGMDIVRSKIENVNGVVEVDSTPGKGATFTIKLPLTMAILPSLMTRINGETF 880 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT----EATQG 580 LP+ ++ E ++ + + G +RG + +V L ++F+ +AT Sbjct: 881 ALPIESISEIVRVPREEFGTVQ-GVLTASIRGRVVSVVRLEQLFDGVRPPATDTIDATDA 939 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +V++ GR L VD L+G+ +VVK++ NY V G+S A I GDG VALI+D SA+ Sbjct: 940 TIVVIGQEGRELGLAVDDLLGEEDIVVKSMAENYENVVGLSGACIRGDGRVALILDPSAM 999 Query: 641 QAINREQR 648 ++R Sbjct: 1000 IDAASQRR 1007 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 13/250 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAP----------DAEQLNAIFRAAHSIKGGA 54 + F DE+ +L+ + +LL L A DA+ +N +FR+AHS+KG + Sbjct: 10 FDNLLSDFLDESSQLIDRLNDNLLELDEWAKLAAEDGGAILDADLVNDMFRSAHSVKGLS 69 Query: 55 GTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 G + TH +EN+ D ARR E+++ + ++ + + D++ L +++ D Sbjct: 70 AMLGLPSINCLTHNVENIFDAARRNELKVTSHVVEIVFNSVDLLSAMLHELRENASDDVP 129 Query: 115 S---FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE 171 + I L + + + + A+ E E ++ Sbjct: 130 CEEMIEQIKAVLNEAGCAREQTSQADAEAFLDDAEVEVDVEVDVEADAEADAEVEVEVEA 189 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 + E ++G + D +E V F+ E + E ++ Sbjct: 190 EAEADVEANRGEIAAAALRGEVAAMFAGVTDESEVPAKYVSIFIDETEMAVDELSDILVS 249 Query: 232 ISTPPVLKLA 241 I + + Sbjct: 250 IDSEVAEAVT 259 >UniRef50_C7R7A2 CheA signal transduction histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7A2_KANKD Length = 2213 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 184/665 (27%), Positives = 317/665 (47%), Gaps = 45/665 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F EA ELL+ E+ + + + + LN+ R H++K GA + + E Sbjct: 1445 EELAELFLGEASELLSSYEEAIERWSGDLHNTQPLNSAMRNLHTLKSGAKLAAITPIGEL 1504 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP------------DA 113 TH +E L++ R N+ ++ + D + E ++ + P D Sbjct: 1505 THKLEGLVEALARDPRLGNSRWADVLRRSYDQLHEMVEQVRNGHMPEKPAELLRKLESDK 1564 Query: 114 ASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 A+ + L + L GE + V +S+ + + ++E ++ + R +I R+++ +D Sbjct: 1565 ATIESQLDQLDKRDLAESGEQ-AEVKVVSLADRQKQKEEAAKEAANRDVI--RVRSEVLD 1621 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L G + ++ D+ + +Q+ +E ++ Sbjct: 1622 NLVNLSGEASIFRSRLEQ-------QVADLNFNLKEMSSTVDRLREQLRNLEIETEAQVL 1674 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 + + +E ++ TR E T L+ +L+ Q L Sbjct: 1675 YRREIS-GVDFDEFDPLEMDRYTRQQELTR---------SLLEAASDLMSIQETLE---- 1720 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 GD ++ R +LQ+ +M RM+P + SR R+VR ++ +L K V+L Sbjct: 1721 ----TKVGDAEATLLAQGRVNTELQDRLMRTRMVPFNSIESRLRRMVRQISTELNKDVDL 1776 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 L S E+D+++IER++ PL H++RN++DHGIE +R AGK G + LS +G Sbjct: 1777 ILE-SEGEMDRTVIERMVAPLDHMLRNAIDHGIESKTERKKAGKVEKGTVHLSLSRRGNE 1835 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 + I++ DDGAG+ ++++ A+A SQG+ N +D E+ LI PGFSTAE VT +SGRG Sbjct: 1836 VYIQIQDDGAGIRKDKVRARAISQGMIDESYNPTDRELFRLILQPGFSTAETVTQISGRG 1895 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV I ++GG + I S++G GTT+ + LP TL+ + VRV E + +PL+ + Sbjct: 1896 VGMDVVHSEILQLGGSLNISSEEGQGTTMTVRLPFTLSSNQALMVRVKGEPYAIPLSNIT 1955 Query: 533 ESLQPREADLHPL-AGGERVLEVRGEYLPIVELWKVFNVAGA--KTEATQGIVVILQSGG 589 + ++ + ++ GE + L ++ + V+I+Q Sbjct: 1956 TVARVSAKEVLEIYQDKDKTFSHLGEEFELRYLGQILDRNSDIIPPVDEYVPVLIIQGED 2015 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 + A+ VD+LIG ++VVKN+ VPGIS A+ILGDGSV LI+D+ L E Sbjct: 2016 KPIAVHVDELIGSREIVVKNIGRQISTVPGISGASILGDGSVVLILDMQTLVDRFHEWDF 2075 Query: 650 ANTAA 654 A+ A Sbjct: 2076 AHEAG 2080 Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 80/218 (36%), Gaps = 5/218 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EADE+L +M L + + + E +N I R H++KG G + + E + Sbjct: 600 EVREIFIEEADEVLEEMHSLLPEWKQDQTNKEAINTIRRNFHTLKGSGRMVGATDIGELS 659 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ ++ + + E +I+ + + + + + + ++ Sbjct: 660 WAIENMLNRLLDHSIEYSPALFVTTEEVANILPKMVKQFAGGERTQYPR--DLAERANRI 717 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + KGE + + + E + + +++ + T + Sbjct: 718 S---KGEIITDIQPHQEQTEEEADQAAEQELFDIFKQEAEGHVTNLEMFANQRQQGITQS 774 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 + L G +I ++ ++ + E Sbjct: 775 QISDNLLRSLHTLKGVAHIANIQSLTNVIVPVESYFQE 812 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 56/339 (16%), Positives = 121/339 (35%), Gaps = 35/339 (10%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +EA+EL L + E + + + + R H++KG A GFS + + H +E Sbjct: 1262 IFSEEAEELFDSDAALLQKWRQEPNNVKIIAELQRNLHTLKGSARMAGFSPIGDLAHGLE 1321 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA 130 +L + I+L +D + +A + + + + + + ++ + Sbjct: 1322 DLYTAITDQLFAASDQAIDLAERAEDQLLAIFNA-RNTPDQIPSPAAMLDEIQGFISAQK 1380 Query: 131 KG--------------ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 G E + AK+E E+++++ P +I + L E Sbjct: 1381 AGRAYVRPQAEDIKPTEIVEEPQQPVEEAKTESPKEENKAEEPEQIKTEEPTQDKGALEE 1440 Query: 177 ----EELGHLT--TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 EEL L ++++ + GD+ + + + ++P Sbjct: 1441 AAWNEELAELFLGEASELLSSYEEAIERWSGDLHNTQPLNSAMRNLHTLKSGAKLAAITP 1500 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG---------EL 281 L+ E + S + +R + +++ +++ V EL Sbjct: 1501 IGELTHKLEGLVEALARDP----RLGNSRWADVLRRSYDQLHEMVEQVRNGHMPEKPAEL 1556 Query: 282 VI-TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 + +S A S+LD ++ DL S Q + L + Sbjct: 1557 LRKLESDKATIESQLDQLDKRDLAESGEQAEVKVVSLAD 1595 Score = 55.6 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 3/130 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F EA+ + ++E Q ++ + + R+ H++KG A L Sbjct: 744 ELFDIFKQEAEGHVTNLEMFANQRQQGITQSQISDNLLRSLHTLKGVAHIANIQSLTNVI 803 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL--R 124 +E+ E + E+ + L TKD+++ + + Q + D I Q L + Sbjct: 804 VPVESYFQELKTRELLAEEGDMALIDHTKDLLRYIISTPEDDQ-VISVHEDEILQQLSKQ 862 Query: 125 QLALEAKGET 134 Q + GET Sbjct: 863 QKRFDESGET 872 >UniRef50_C7I5C3 CheA signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I5C3_THIIN Length = 1989 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 186/661 (28%), Positives = 303/661 (45%), Gaps = 45/661 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D + F +EA+ELL + L + D RA H++KG A G L + Sbjct: 1181 DLFPIFEEEANELLPALAASLRQWEQHPQDTAPAAQAMRALHTLKGSARMAGAMQLGDLA 1240 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+ +D ++ + L D + + D + + + + + Sbjct: 1241 HSLESDIDTL-TANTPVSEADLAELLGRFDHLNTRFDRLCSAAQRGESQLADL-----PV 1294 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQ---------DEQSRSQSPRRII-LSRLKAGEVDLLE 176 A ++ TPSA + A+ P + +R +PR R++AG +D L Sbjct: 1295 ATVSEVFTPSAEPDTAASAQPLPAVAVNTAAAAEPVNRVLAPRIAAQAVRVRAGLLDRLV 1354 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 + G +T ++ GD++++ + Q E + + Sbjct: 1355 NQAGEITISRARLENEFGAIRASVGDLSDN--------LDRLRQQVREIEIQAEAQMSAQ 1406 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 V E +E ++ TR+ E T R+ E V+ + + G L S L + Sbjct: 1407 VQAARDENRDFDPLEFDRFTRAQELT--RMMAESVNDIAMVQGTL----SRLLR------ 1454 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 ++ M + R R+LQ ++ RM+ + + R R VR A LGK V L ++ Sbjct: 1455 -----EVDDDMTRQARQTRELQRDLLRTRMVEFDSLSERLYRTVRQAAKDLGKAVRLEII 1509 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G + ELD+ ++ER+ HL+RN++ HGIE E+R AAGK VG L LS G + I Sbjct: 1510 GGAIELDRGVLERVSSSFDHLLRNAVAHGIETAEERKAAGKPEVGTLTLSLRQDGNEVVI 1569 Query: 417 EVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 + DDG GLN I AKA GL +N+S+ E+ L+F P FS+AE T V+GRGVG+ Sbjct: 1570 TLADDGRGLNYAAIRAKAERLGLLAPGQNVSEAELTQLVFRPNFSSAESTTAVAGRGVGL 1629 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVV+ + +GG V + ++ G+G +LLPLT AI + +R V+ +P N V L Sbjct: 1630 DVVRTEVNALGGRVLLDNQPGSGARFTLLLPLTTAITHVVLLRTGAAVYAVPANLVDIVL 1689 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA--TQGIVVILQSGGRRYA 593 + + + A +E LP L + +G +E VV+++S +R A Sbjct: 1690 RFKPEQIANAA-RTLSIEYANNTLPFYWLGALLGQSGGSSEPFGKSVPVVVIRSATQRVA 1748 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 + VD+++G +VVVKNL +VPG++ ++L +G ALI + AL A+ A Sbjct: 1749 IQVDEVVGNREVVVKNLGPQLSRVPGLAGISVLPNGDAALIYNPVALAAVYGADASARMQ 1808 Query: 654 A 654 A Sbjct: 1809 A 1809 Score = 93.7 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 53/292 (18%), Positives = 99/292 (33%), Gaps = 17/292 (5%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +EA E++A + L L D L ++ RA H++KG + G E Sbjct: 713 DELIDIFLEEAREVIASGHEQLQQLHANLDDEGALTSLRRAFHTLKGSSRMVGLRDYGEA 772 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E + + + + + ++NL + E A +Q Q +A S + + +A Sbjct: 773 AWALEQVFNRQIADQHRASPPLLNLAAHALTELGEWTAAIQQGQ-AEAFSSEPLRRAAEA 831 Query: 126 LALEAKGE--------TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA--GEVDLL 175 A E P+ ++ + A E + +P L + + Sbjct: 832 YAAGESAEPALPTLHDAPNELSMAAEPAAVEATESPGEPAAPEPEALHEPTDFNALFEGI 891 Query: 176 EEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 + EL H T + + A+ ++ A + D L V EAD FE + Sbjct: 892 DLELPHHTQAPEPMPSAEMSTVEAPPAEMPSSDAPAVELPQVEEADMAEFEAAVSAQYAP 951 Query: 234 TPPVLKLAAEQAPTGRVEREKT----TRSNESTSIRVAVEKVDQLINLVGEL 281 A V E + + +R+ + + EL Sbjct: 952 PADTAADTAADTDIAPVPPENSDEGEPGYRQIGELRIPTPLYNIYLAEADEL 1003 Score = 57.5 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 55/332 (16%), Positives = 110/332 (33%), Gaps = 25/332 (7%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Y + EADEL + + + A A+ +AH + G + T G + + Sbjct: 992 LYNIYLAEADELSRHLYSDIHDWLTDPAQALGDAAVI-SAHKLAGSSATVGLRSVADLAS 1050 Query: 68 LMENLLDEARRGEMQLN-TDIINLFLETKDIMQEQLDAYKQS-QEPDAASFDYICQALRQ 125 E+ LD R ++ + +++ L + +P A +AL++ Sbjct: 1051 QTEHALDALRDLPAHATRPADLDALAQAASDIKQLLHQFAAGFLKPVQAELLTRLEALQE 1110 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 AL + PSA + + +EP + + +P +R A E L + Sbjct: 1111 AALAQSAQ-PSAESVTELTHAAEPAVQPEQIAAPELAPATREPAS-----AETLQPQASA 1164 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 T AD L + D+ ++ A + E P+ + P + A Sbjct: 1165 TQSAASADQLVDTIDPDL-FPIFEEEANELLPALAASLRQWEQHPQDTAPAAQAMRALHT 1223 Query: 246 PTGRVEREKTTRSNEST-SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 G + + S+ ++ L ++++ LA+ D +N Sbjct: 1224 LKGSARMAGAMQLGDLAHSLESDID------TLTANTPVSEADLAELLGRFDHLN----- 1272 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 + R Q + +P+ V + Sbjct: 1273 ---TRFDRLCSAAQRGESQLADLPVATVSEVF 1301 >UniRef50_Q4K4F2 Sensor histidine kinase/response regulator ChpA, putative n=4 Tax=Bacteria RepID=Q4K4F2_PSEF5 Length = 1969 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 175/654 (26%), Positives = 311/654 (47%), Gaps = 34/654 (5%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +E +++ L Q E +++ + R H++KGGA + + + Sbjct: 1210 ELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVETLLRDLHTLKGGARMVEIAPIGDLA 1269 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + G +Q + + L ++ D + + LDA + Q + A + + + Sbjct: 1270 HELEFLFEGLSAGLLQPSPVLFTLLQKSHDRLAQMLDAARAGQPIEPAQ-----KLIDAI 1324 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + + V + + ++P+ +++ + ++ A +D L G + Sbjct: 1325 HDLSHPRVATGVAAEAALPSTKPEPAAPAAEAAVAGDMVKVSAELLDDLVNLAGETSIFR 1384 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 ++ + D TA+ +++ + + + + + E Sbjct: 1385 GRIEQQVN-----------DARTALGEMETTIERMRDQLRRLDTETQGRILSRQQVEAER 1433 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 G E + + +++ QL L L + S L LD NH D Sbjct: 1434 LGYEEFDP-----------LEMDRHSQLQQLSRALFESASDLLDLKETLDRRNH-DAENL 1481 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + Q R +LQE +M RM+P E + R R+VR +A +LGK VE + + E+D+++ Sbjct: 1482 LQQQGRINTELQEGLMRTRMVPFERMVPRLKRIVRQVAEELGKDVEFVVGNAEGEMDRNV 1541 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +ER++ PL H++RN++DHG+E E RLAAGK + G + L +GG++ ++ DDGAG+ Sbjct: 1542 LERMVAPLEHMLRNAVDHGLESAEARLAAGKPAQGRISLDLSREGGDMIFDMRDDGAGVP 1601 Query: 427 RERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 E + KA +GL E +SD EV I PGFSTAE++T +SGRGVGMDVV ++++ Sbjct: 1602 LEAVRKKAIKRGLLDPEAQLSDREVLQFIMQPGFSTAEKITQISGRGVGMDVVHEEVRQL 1661 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 GG + I S G G RI LP T+++ + V+ ADE + +PLN V ++ A+L Sbjct: 1662 GGSMSIDSVAGQGVHFRIRLPFTVSVNRALMVQCADEQYAIPLNTVEGIVRVLPAELDGY 1721 Query: 546 AG-GERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVDQLIG 601 E G+ + L ++ + + V+++ +R A+ VD G Sbjct: 1722 YQLDPPRYEYAGQSYQLCYLGELLHTVPRPKLLGQVQPLPVLLVHCNEQRIAVQVDTTAG 1781 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA-LQAINREQRMANTAA 654 ++VVK+L + V G+S ATILGDG V LI+D+ A ++A+ + + A Sbjct: 1782 TREIVVKSLGPQFAAVQGLSGATILGDGRVVLILDLLAHIRALQAQAPLPRLAG 1835 Score = 102 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 60/369 (16%), Positives = 132/369 (35%), Gaps = 48/369 (13%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +EA ++L +Q L + + L+++ R H++KGGA + + E Sbjct: 1067 DEIVEIFLEEAVDILESADQALQRWLADPDNGAPLSSLQRDLHTLKGGARMAEVAPVAEL 1126 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLET-----------------KDIMQEQLDAYKQS 108 +E+L + + + L L + D + Q++A + Sbjct: 1127 AQELESLYEGLVDRRYSHSQHL-GLLLRSSHEQLALLLEQLQGQHPLDESRAQIEAVRSY 1185 Query: 109 QEPDAASFDYICQALRQLALEAKGETPS-------AVTRLSVVAKSEPQDEQSRSQSPRR 161 ++ A++ + + E + S A + Q E Q Sbjct: 1186 RQQAASTGEVAQGTVEADRAAQDPELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVET 1245 Query: 162 II--LSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPG-------DIAEDDITAVL 212 ++ L LK G + +G L + + S + P + D + +L Sbjct: 1246 LLRDLHTLKGGARMVEIAPIGDLAHELEFLFEGLSAGLLQPSPVLFTLLQKSHDRLAQML 1305 Query: 213 --CFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES----TSIRV 266 + + + ++ +S P V A +A + E + E+ ++V Sbjct: 1306 DAARAGQPIEPAQKLIDAIHDLSHPRVATGVAAEAALPSTKPEPAAPAAEAAVAGDMVKV 1365 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 + E +D L+NL GE I + + Q+ D T++G+++ +++ + + Sbjct: 1366 SAELLDDLVNLAGETSIFRGRIEQQV--------NDARTALGEMETTIERMRDQLRRLDT 1417 Query: 327 MPMEYVFSR 335 + SR Sbjct: 1418 ETQGRILSR 1426 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 55/139 (39%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F +E +E+L + ++L + L+ + RA H++KG VL E Sbjct: 627 DELREVFLEETEEVLEMLREYLPRWAADPHGTSALSELRRAFHTLKGSGRMVRALVLGEL 686 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +ENLL+ ++ + L +T ++ E + + Q + D + Sbjct: 687 AWAVENLLNRVLEHSVEPGVEARQLVADTLQLLPELIAEFAQQAQRQRDDVDRLAARAHA 746 Query: 126 LALEAKGETPSAVTRLSVV 144 LA A+G P L Sbjct: 747 LANGAQGSAPVPAEALDPQ 765 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/237 (16%), Positives = 78/237 (32%), Gaps = 7/237 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 F + ++L D E L Q + ++L+A+ ++ GA + E Sbjct: 906 QLINNFLAQGMDILLDAESLLRRWQQHPGERQELSALLDELTTLGEGAHLADLHPVDELC 965 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 + +L + ++ + D + LD QE QALR+L Sbjct: 966 EALLDLYGAVEESSLAVSERFFHEAESAHDALINMLDELAAGQEVSPRP--ERVQALREL 1023 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 E + + + + S +++ E + + + L+A + + L Sbjct: 1024 LDEGLDPSATGLIK-SDGSRALSISELGAATARLEQAEAPLQADDEIVEI----FLEEAV 1078 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 D+++ AD D + L + + EV+P L+ E Sbjct: 1079 DILESADQALQRWLADPDNGAPLSSLQRDLHTLKGGARMAEVAPVAELAQELESLYE 1135 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 10/196 (5%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E E L Q L L + E ++ H + G F ME L Sbjct: 16 EIAETLKQAHQALEHLADDPQALEAIDQCLEGIHLVHGSLQMVEFYGAALLAEEMEKLAL 75 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR-----QLALE 129 ++G + + + L + + + LD + ++ + LR L E Sbjct: 76 ALQQGRVAQRDEALRLLRQAIGQLPQYLDRVQSARRDLPLVVLPLLNDLRSARGESLLSE 135 Query: 130 AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE-----LGHLTT 184 +P + + K+ E + R + L+ VDLL E+ LG++ Sbjct: 136 TSLFSPQLPSLPPLSDKALAALEPLELPNQLRKLRHMLQTALVDLLREQDDEQSLGYMAK 195 Query: 185 LTDVVKGADSLSAILP 200 + + ++ + + P Sbjct: 196 VFERLEALCQDAPLAP 211 >UniRef50_A4BK22 Chemotaxis protein histidine kinase and related kinase (Fragment) n=1 Tax=Reinekea blandensis MED297 RepID=A4BK22_9GAMM Length = 1355 Score = 495 bits (1275), Expect = e-138, Method: Composition-based stats. Identities = 180/663 (27%), Positives = 309/663 (46%), Gaps = 27/663 (4%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ D + F DEA ELL ++E + + + + + + R H++KGGA L Sbjct: 547 DLDFDILEIFIDEAGELLNELENAVEEWRSDPTNEAHADEMKRVLHTLKGGARLARLKAL 606 Query: 63 QETTHLMENLLDEARRGEMQLNTDII-------NLFLETKDIMQEQLDAYKQSQEPDAAS 115 + H E+ + A++ + L+ + + + +Q+ L+ + S Sbjct: 607 GDQAHDFESFIIRAQQNRIDLDDAFFKEVLLRQDSLVNDIERLQKVLEEHGSESGGFGPS 666 Query: 116 FDYICQALRQ--LALEAKGETPSA----VTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + + + ++G+ P V +SEP D +++ P + Sbjct: 667 VIQMVSEMDESEFDQMSEGDEPKTGLTLVPEQETPVESEPDDSSTKNVVPFKARQETTSP 726 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL--CFVIEADQITFETVE 227 D + VK + +L L E I+ V + + + Sbjct: 727 KSGDARGNAQAKRNQPQETVKVSANLLEGLVNLAGETSISRARLEQEVSDFGFTLGDMDQ 786 Query: 228 VSPKI-STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 ++ L + E R ER + T + + + + Q+ L L+ Sbjct: 787 TIDRLRDHVRRLDMETEAQIIFRQERAEETNYEDFDPLEMD--RYSQIQQLSRSLMEATY 844 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 L S L D T + Q R +LQE +M RM+P + R R+VR ++G+ Sbjct: 845 DLQDIKSTLSD-KTRDAETILLQQSRINTELQEGLMRTRMVPFNRLLPRLRRIVRQVSGE 903 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGK V+ + + E+D++++ER+I PL HL+RN++DHGIE P+ R +AGK G + L Sbjct: 904 LGKNVDFMVGNAEGEVDRTVLERMISPLEHLLRNAVDHGIEKPDVRFSAGKAERGTIRLD 963 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQV 465 +GG+I + + DDG G++ E+I AKA +GL + +++D EV I GFSTAE V Sbjct: 964 LSREGGDIVLSLEDDGKGIDVEKIRAKAIERGLMKPDADLNDTEVMQFILEAGFSTAEAV 1023 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 T +SGRGVGMDVV ++++GG + I S G G+ I LP T+++ + V + D+++ Sbjct: 1024 TQISGRGVGMDVVNSEVKQLGGSIFIDSVAGRGSMFTIRLPFTVSVNRALMVNIMDDLYA 1083 Query: 526 LPLNAVMESLQPREADL-HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA---TQGI 581 LPL ++ ++ L + E G + + + + + A Sbjct: 1084 LPLTSIEGIVRVTPKQLMEYYKPDAPLFEYGGSRYRLEYMGALLHTGAKPSLAGLDQSVP 1143 Query: 582 VVILQSGGRR--YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 +V+++ R AL VD+L+G ++VVK L + + KVPG+S ATILGDGSV +I+D+ A Sbjct: 1144 LVLVRGNDARHSMALHVDRLMGSREIVVKTLGAQFSKVPGVSGATILGDGSVVVILDLGA 1203 Query: 640 LQA 642 L Sbjct: 1204 LIR 1206 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 54/271 (19%), Positives = 107/271 (39%), Gaps = 10/271 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA+++L +++Q L + + ++ A+ R H++KGGA S L + Sbjct: 361 ELVEIFLEEANDILENIQQSLDGWIEDTQNTIEVEALQRDLHTLKGGARMAEVSPLGDLA 420 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E L + +G+ Q + +I L + D + E + + S +A + A+ Q Sbjct: 421 HELEFLYEGLAQGQYQSSPGLITLLQQCHDRLAEMVGDIESSMTCVSAP--DLVWAISQF 478 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + G PS V V + E E+ + + ++ E + + + Sbjct: 479 -RKNPGSPPSPVNLTPVKEEPELPVEEPIDDTADSVTTPPVEETESEPETTDEVAAEDSS 537 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET-VEVSPKISTPPVLKLAAEQA 245 D V ++L L DI E I + E + E + + + + ++ Sbjct: 538 DTV--TEALPEDLDFDILEIFIDEAGELLNELENAVEEWRSDPTNEAHADEMKRVLHTLK 595 Query: 246 PTGRVEREKTTRSN----ESTSIRVAVEKVD 272 R+ R K ES IR ++D Sbjct: 596 GGARLARLKALGDQAHDFESFIIRAQQNRID 626 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 4/188 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F E + L +E +L + + +A+ RA H+IKG A + E Sbjct: 57 ENLLKIFNSELETHLEFVETYL---ADQPVGQKLPDALQRALHTIKGSAHMASMDTIAEI 113 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +ENL+ + + N + N +++ +Q A ++I Q Sbjct: 114 VQPVENLVKGYQERGLAANDSMTNSLERMVSLVKHFTSPGVDNQMTGDAR-EFIASVEGQ 172 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 LA + SA +S+++ + + + R D + + L TL Sbjct: 173 LAQLSAATDDSANEDVSLMSIFLSESMDIVMDAESILDQWRSTGEAGDASQTLIRELDTL 232 Query: 186 TDVVKGAD 193 D Sbjct: 233 AQAAHAVD 240 Score = 54.8 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 54/315 (17%), Positives = 97/315 (30%), Gaps = 32/315 (10%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E+ +++ D E L + + + R ++ A L + ++ Sbjct: 190 LMSIFLSESMDIVMDAESILDQWRSTGEAGDASQTLIRELDTLAQAAHAVDLIPLSQLSN 249 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 + +L A + NL + + + +D Q + + L+QL Sbjct: 250 ELRSLYVAAESNPYIIEEKFFNLAHDGHESLISMMDRLAAGQSIRTDAL--FSERLQQLY 307 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 S A S+P D S P L E+ D Sbjct: 308 DLYAIPYQVLEPEQSDGASSDPVDSAPSSSEPSTPAA----------LPPEVQAERFTVD 357 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 + DI E+ I L IE Q T E + + T AE +P Sbjct: 358 GDPELVEIFLEEANDILEN-IQQSLDGWIEDTQNTIEVEALQRDLHTLKGGARMAEVSPL 416 Query: 248 GRVEREKTTRSNESTS---------IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 G + E I + + D+L +VG++ S + V Sbjct: 417 GDLAHELEFLYEGLAQGQYQSSPGLITLLQQCHDRLAEMVGDI----------ESSMTCV 466 Query: 299 NHGDLITSMGQLQRN 313 + DL+ ++ Q ++N Sbjct: 467 SAPDLVWAISQFRKN 481 >UniRef50_B3R318 Response regulator receiver of TWO COMPONENT REGULATORY system (SENSOR HISTIDINE KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R318_CUPTR Length = 1979 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 170/669 (25%), Positives = 291/669 (43%), Gaps = 55/669 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Q F +EA L ++ + L + DA + RA H++KG A G L + H Sbjct: 1149 LVQIFLEEAQGSLPELGKLLRGWEAAPDDARHGGLVLRALHTLKGSARMAGAMALGQAAH 1208 Query: 68 LMENLLDEARRGEMQ--LNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI------ 119 ME LLD RG+ Q + + D + +A + + A D + Sbjct: 1209 EMETLLDSTLRGQAQQPVAAKVFERLYAWYDRILAHAEALQAGRLLPADDPDVVNGLAEP 1268 Query: 120 -----CQALRQLALEAKGETPSAVTRLSVVAKSEPQD-------------EQSRSQSPRR 161 + A + G++ + ++ P D + + + Sbjct: 1269 SPAADAAMAQPQAADGAGDSSAEAPAPALPVVPGPSDVMVPMPPAAALAPLAPLAAAEPQ 1328 Query: 162 IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 L R++A +D L E G + + G++ ++ + Sbjct: 1329 RALVRVQARALDTLINEAGEVGATRARLDSELEAMRAYLGELNDNVARL---------RG 1379 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL 281 +E+ + + A + +E ++ TR E T R+ E V+ + Sbjct: 1380 QLREIEIQAESQMASRIADAQHKQEFDPLEFDRFTRFQELT--RMMAESVNDV------- 1430 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 + + Q GDL R R LQ +M RM+ + + R R+ R Sbjct: 1431 ----ATVEQNLQRGFDRAAGDLAA----QARLTRGLQRGLMQARMVQFDALAERLYRVAR 1482 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 A + GK+V L + G + E+D+S+++R+ P+ HL+RN++ HGIE +R AAGK + G Sbjct: 1483 QAAAETGKEVRLLIKGGTVEIDRSVLDRMAGPIEHLIRNAVAHGIEPAAQRRAAGKPATG 1542 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFS 460 L L + +G + + DDG GL+ RI A+A + L ++ S+ + +IF PGFS Sbjct: 1543 ALTLEVQQEGNEVVLHFIDDGGGLDLARIRARAVERRLLAPDDDASEARLTEMIFTPGFS 1602 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TA+ V++++GRGVGMDVV+ +GG + + S+ G GTT + LPLT AI + + + Sbjct: 1603 TAQAVSELAGRGVGMDVVRAETVALGGRITLASQPGQGTTFTVHLPLTTAITQVLVIALG 1662 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ- 579 + +P + + Q R L A L V G +P + A + + Sbjct: 1663 GRRYAVPSGMIDQVQQLRAPSLLD-AYNHGNLNVAGAEVPFFYFGALLEQGQAVSGGRKY 1721 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 VV+++SG R A+ VD ++G +VVVK++ + ++ GI+ AT LGDG + LI + Sbjct: 1722 SPVVVVRSGAERVAVHVDDVVGNREVVVKHIGPHLARLEGIAGATTLGDGEIVLIYNPVV 1781 Query: 640 LQAINREQR 648 L +R Sbjct: 1782 LAQRFVRER 1790 Score = 79.1 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 96/314 (30%), Gaps = 11/314 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EADE+LA + L DA+ L+ + RA H++KG + G E Sbjct: 754 AELLDIFLNEADEVLAGIAGDLGTGVEALRDADMLSRLRRAFHTLKGSSRMVGLHRYGEA 813 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E +++ + ++ L + + + A Sbjct: 814 AWAVEQVMNLWLAEAREPAPALLALLRRAHAELSAWVARLHGDAAAWHDIAPLVAAAEAV 873 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL-GHLTT 184 E P A ++ + E + S + + +++ L G L+ Sbjct: 874 RDAGTATEMPPAAPEVAGDDAPDEHAEAAASADTGTGASADTGTSDDNVIPFRLAGGLSD 933 Query: 185 LTDVVKGADSLSAILPG----DIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 D K + L DD+ I + + L+ Sbjct: 934 EDDHYKVIGPVRIGLALYNVYLQEADDLLRQFATDISEWRHEAHPCPSELALRVAHTLQG 993 Query: 241 AAEQAPTGRVEREKTTRSNEST---SIRVAVEKVD-QLINLVGELVITQSMLAQRSSELD 296 +A V S VA+ D +L+ E + ML Q ++ + Sbjct: 994 SASTVGLEPVREIAEALEALLLQLGSHPVAMHAGDFRLLEQAAE--RMRGMLHQFAAGIW 1051 Query: 297 PVNHGDLITSMGQL 310 P L S+ + Sbjct: 1052 PQADAALRRSLVEF 1065 >UniRef50_A5WHF4 CheA signal transduction histidine kinase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WHF4_PSYWF Length = 1609 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 184/682 (26%), Positives = 319/682 (46%), Gaps = 48/682 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EA +L D ++ L + Q D +N + R H++KGGA G L E Sbjct: 779 AELLAIFIEEAQQLDTDSQEQLRLWQQNPADLAPVNVLLRYLHTLKGGARMAGIDSLAEL 838 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQAL- 123 TH E L + ++ + + + L +D + Q+D+ +Q Q Q + Sbjct: 839 THEAETLYEYLLDQQIVPDANWVALMQSVQDTLSAQVDSLVRQGQSFFVPELVAKLQTIV 898 Query: 124 ----------RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + + L +G+T + ++SV A +++ ++QS I + D Sbjct: 899 RSKRLPESDTKPIQLYTEGDTAADHDKVSVKATIMAENKAPKAQSTENIDHKQSAH---D 955 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI- 232 + + L + + + + + +P + E I I I V+ + Sbjct: 956 ISQMPPSLLRSQSGATQDSSNEMIRVPAKLMEQMIDLSAESAIHRSGIELNMSSVAGTLS 1015 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL-INLVGELVITQSMLAQR 291 ++ AEQ +E E RS + A + D L ++ L L++ Sbjct: 1016 EMESTVQRLAEQLRRMDIELEAQIRSQIEDHVLQADQSFDPLEMDQYSALNQLSKSLSES 1075 Query: 292 SSELDPVNHG------DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAG 345 +S+L + + + + QL + +QE +MS RM+P + R R +R A Sbjct: 1076 ASDLLEIRTSLRSKTRETESLLLQLSQTQTQMQEGLMSSRMVPFSRLLPRLQRTLRQTAN 1135 Query: 346 KLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLIL 405 ++GK+ +L L+ E+D++++ER+ PL H+VRN++DHG+E P++R A GK G++I+ Sbjct: 1136 EVGKEAKLELITDIDEIDRTVLERLTAPLEHMVRNAIDHGLETPDQREALGKPRTGHIIM 1195 Query: 406 SAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--MSDDEVAMLIFAPGFSTAE 463 +G I I V DDG G++ + KA + L +++ +SD EV IF G STA Sbjct: 1196 EMGRKGSEIVIRVKDDGQGIDVNSVRKKAIACRLMDAQDNTLSDLEVMQYIFHAGLSTAS 1255 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 +T +SGRGVGMDVV ++++GG+V + S GT + LPLTLA+++ + VR D+ Sbjct: 1256 SLTQISGRGVGMDVVLNEVRQLGGNVTVHSSANQGTEFTLTLPLTLAVIEALVVRAGDQT 1315 Query: 524 FILPLNAVMESLQPREADLHPLAGGER-----------------VLEVRGEYLPIVELWK 566 + +PL + + L L +R L V G+ + L + Sbjct: 1316 YAVPLLQIERIERIAAQRLRSLYDSKRNRNQNGSPKTVGGHESAQLNVGGKPYRVRYLTQ 1375 Query: 567 VF-----NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH-QVVVKNLESNYRKVPGI 620 + +V T+ + +++I G+ +AL VD++IG +VVVK L + G+ Sbjct: 1376 LLSGETVDVKVFDTQDSLPVLLIKHHAGQSFALHVDEIIGSRSEVVVKPLGRPLSSIAGL 1435 Query: 621 SAATILGDGSVALIVDVSALQA 642 SAATI +GSV LI+DV AL Sbjct: 1436 SAATITAEGSVMLILDVQALIR 1457 Score = 88.3 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 4/273 (1%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + Q F +EA E+L + + + L P D QL + R H++KG G + E Sbjct: 258 EIKQIFVEEAQEVLQAITEAMAQLTPHLQDKVQLGEVRRGFHTLKGSGRMAGAHTIAELA 317 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ ++ T I L E + + + D + Sbjct: 318 WAIENMLNRLLDDSIEPTTGIWQLLTEVVAQYPALVAIFAEPASADKPKLPLYPSKIVDQ 377 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A + T +PQ ++ ++ +A L L Sbjct: 378 IAAANLYANNKHTESDDWQLLQPQLSEAIETIEAIEAINDDQAHLPQRLPLSLDAAAPAQ 437 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 +AI ++A+ + + D + + + S +L+ A Sbjct: 438 STALRNSVDNAIDEAELAQVFMAEATELLQSIDAMLAQHQDSSSFEVDDKLLR-AFHTLR 496 Query: 247 TGRVEREKTTRSNESTSIRVAVEKV---DQLIN 276 + TT S S ++ +E++ DQLI Sbjct: 497 GAASSQSLTTISQLSAAVEQDLEQLQQSDQLIT 529 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 49/103 (47%), Gaps = 1/103 (0%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++D ++ Q F EA ELL ++ L ++ E + + RA H+++G A + + Sbjct: 448 AIDEAELAQVFMAEATELLQSIDAMLAQ-HQDSSSFEVDDKLLRAFHTLRGAASSQSLTT 506 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA 104 + + + +E L++ ++ + + + ++ +++ L Sbjct: 507 ISQLSAAVEQDLEQLQQSDQLITPSYADTLRQSIGLIKSHLQQ 549 >UniRef50_A8ZWJ2 CheA signal transduction histidine kinase n=2 Tax=Desulfobacteraceae RepID=A8ZWJ2_DESOH Length = 1085 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 213/789 (26%), Positives = 354/789 (44%), Gaps = 150/789 (19%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFG 58 M ++ + Q + +E+ + +A++E +LL ++ ++ D E +N +FRAAHSIKGGAG G Sbjct: 1 MLIEDEESLQMYVEESLDHMANIENNLLAIEKGGDSADPEIVNEVFRAAHSIKGGAGLMG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + ++E +H +E++L R ++ + II++ L D + E + ++S+ D + Sbjct: 61 LNNIKELSHRVESVLGMIREKKITPDASIISIVLSAFDKLYEMVTHIRESETIDISEEVV 120 Query: 119 ICQALRQLALEAKGET---------PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK- 168 L +L A + P D+ + +I L Sbjct: 121 SLTGLTTASLPAARKPDVTKMINILPPDGGPALFQISRLDLDKARKGGRDLYLIEWDLIQ 180 Query: 169 ------------------AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITA 210 +G+V + ++ + TL + + + I +D + + Sbjct: 181 DIHEQERSLMEMMKSVSMSGDVLDITMKIEAVGTLEEGTPSRIPILMLYSSRIGDDILPS 240 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE---------- 260 + E + V + P ++ A T + +TT + E Sbjct: 241 LFNVERHQVHRVTEAMMVPAEADKPTPVRPDAGMPETAQSFTTETTPAPEATMPDVADED 300 Query: 261 ----------------------------------STSIRVAVEKVDQLINLVGELVITQS 286 TS+RV V+ +D L+ L GE+V++++ Sbjct: 301 RPAALDTTDTVYADEDDGLTIDSLKGPHVKAALSQTSLRVDVKLLDNLMTLAGEMVLSRN 360 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 L Q L N + ++ ++ +LQ+ +M RM + +F+++PRLVRD++ Sbjct: 361 QLIQ---SLTAQNAKTIASAAQRINMVTSELQDVIMRTRMQSIGTIFNKFPRLVRDMSQT 417 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGK+VELT+ G+ ELDK++IE I +PL HLVRNS+DHGIE P KR GK+ +G + L+ Sbjct: 418 LGKKVELTIEGTDVELDKTIIEAISEPLVHLVRNSVDHGIEPPGKRAQLGKSPIGRIHLA 477 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAE 463 A H+ G + IE+TDDG G++ + I+A A +GL +MS E LI PGFST++ Sbjct: 478 ALHEAGQVSIEITDDGNGIDDQLIVATALRKGLIAERRVADMSRKEKTELILLPGFSTSD 537 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 +VTDVSGRGVGMDVVK N++K+ G ++I S G TTI I LPLTLAI+ + V+ E Sbjct: 538 KVTDVSGRGVGMDVVKTNLEKLSGTMDIDSVPGKYTTISIKLPLTLAIIPSQIISVSTEK 597 Query: 524 FIL------------------------------------PLNAVMESLQPREADLHPLAG 547 + + PL + E L + +HP G Sbjct: 598 YAIPQVNLDELLRIPADQVKNRIEKVGDAPVVRLRGRLLPLVDLAEVLGIEKTYVHPENG 657 Query: 548 ------GERVLEVR-------------------------GEYLPIVELWKVFNVAGAKTE 576 + V + R GE +P Sbjct: 658 LEYSERRQNVADRRSRQHLAETETEDAAPAPAKETRSQSGERIPASRRKA---EDRRFHA 714 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 + + ++ G RY L+VD+L+ ++VVK L ++++ S ATI+GDG V+LI+D Sbjct: 715 TSAVNIAVVFQGNTRYGLIVDRLLDSEEIVVKPLGRHFKQCQEYSGATIMGDGRVSLILD 774 Query: 637 VSALQAINR 645 V+ + R Sbjct: 775 VAGVAQSAR 783 Score = 54.1 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%) Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 DE F + L+ V + + GG+R+++ RG LP+ L +V V+ E+ + Sbjct: 822 DEQFAVSLSLVERIESINPTAIEHV-GGKRIIQYRGGALPLFSLSEVAAVS-PLPESGEI 879 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 V++ GG+ L+V + +V + ++S K PGI + I Sbjct: 880 AVIVFSLGGKEIGLMVAPPVDAIEVPI-TIDSKALKQPGIIGSAI 923 >UniRef50_A1U772 CheA signal transduction histidine kinase n=2 Tax=cellular organisms RepID=A1U772_MARAV Length = 2539 Score = 493 bits (1271), Expect = e-138, Method: Composition-based stats. Identities = 178/658 (27%), Positives = 307/658 (46%), Gaps = 32/658 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA E++ +EQ L + E + RA H++KGGA S L + Sbjct: 1766 EVLEIFLEEAGEIMDQLEQLLDDWRREPANEHFNREAQRALHTLKGGARLSQLSELGDKA 1825 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H E L + G + D + + ++ E A + + + Sbjct: 1826 HAFETRLIDL--GGNAPTEEQWQAITGDHDAIIALVADIRKRFESGAQAPAPQPEKAPEP 1883 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQD---EQSRSQSPRRIILSRLKAGE-VDLLEEELGHL 182 E P A T K P E+S +Q+ ++ ++ A E + + L L Sbjct: 1884 VREEPAPVPKATTAEPAPTKPVPAPAKPEKSAAQARKKAADAQRAAQETIRVSAPLLDEL 1943 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 L D + +Q+ +E +I + Sbjct: 1944 VNLAGETSITRGRLEQQSSDFSYTLDEMAATIERLREQLRRMDIETEAQILFRAEQEHGP 2003 Query: 243 E-QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 + +E ++ + + + L +L + L++R Sbjct: 2004 DYGDDFDPLEMDRYSSIQQLSR---------ALSESTSDLADLRETLSERVR-------- 2046 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 D T + Q R +LQE +M RM+P + R R+VR ++G+LGK+V+ + + E Sbjct: 2047 DTETLLVQQSRINTELQEGLMKTRMIPFSSMVPRLRRIVRQISGELGKKVDFDVRNAEGE 2106 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +D++++ER++ PL H++RN+LDHGIE PE R AGK + G ++LS +GG++ + + DD Sbjct: 2107 MDRNILERMVAPLEHMLRNALDHGIETPEDRTKAGKPATGEVVLSLTREGGDVVLRMMDD 2166 Query: 422 GAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G G+ + I KA QGL + E++S+ E+ I PGFSTA+QVT +SGRGVGMDVV Sbjct: 2167 GKGIPSDVIRDKAVRQGLMRADEDLSEREILQFILQPGFSTAQQVTQISGRGVGMDVVAS 2226 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 I+++GG ++I S G GTT + LP T+++ + V ++ + +PLN + ++ Sbjct: 2227 EIKQLGGSLDIDSALGRGTTFTVRLPFTVSVNRALMVSTGEDFYAIPLNTIEGIVRVSTY 2286 Query: 541 DLHPLAG-GERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIVVILQSGGRRYALLV 596 +L + E G+ + L + N + +A V++++ + AL V Sbjct: 2287 ELEEYYKPDAPMYEYAGQQYRLQYLGSLLNSDHQPKLQGQALPLPVILVRGAEQPMALQV 2346 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA---INREQRMAN 651 DQL+G ++VVK+L + V G+S ATILGDG+V +I+D+ A+ ++ QR+AN Sbjct: 2347 DQLMGSREIVVKSLGPQFSSVRGVSGATILGDGNVVVILDLPAMIRSDILSERQRLAN 2404 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 56/349 (16%), Positives = 123/349 (35%), Gaps = 21/349 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +EA +L+ L + + E + R H++KGGA G + + T Sbjct: 1453 ELVGIFLEEAYDLINSTGSALHTWSEDPSNREVAAELQRDVHTLKGGARMAGVEAIGDLT 1512 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE-PDAASFDYICQALRQ 125 H++E+L ++ G+++ + + +L D + + ++ + P A + QA+ + Sbjct: 1513 HVLEDLFEKVAEGQLEASGQMTDLLFACHDRLAQMVEQVATQKPCPPAEELVHQVQAILR 1572 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG--HLT 183 E P + V++ E + + + S L D +++L L Sbjct: 1573 GESLPSEEPPQSEPGEPEVSELEELEISEQPAAESEESASSLNESLEDATDDDLVGIFLD 1632 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 ++ + + E L + + +V P A + Sbjct: 1633 EGLEIHEAITECLDQWREEPEELAGITRLQQELHTLKGGARLSDVDPIADLAEAWADALD 1692 Query: 244 QAPTGRVEREK--TTRSNESTSIRVAVEKVDQ---------LINL------VGELVITQS 286 Q G ++ + S++ ++ ++ LIN + T+S Sbjct: 1693 QLIAGDRDQSAMLGLSDRAAASLKSMLDALEDSRKPDADAALINALRTAAPAEDTSGTES 1752 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 A+ + E D V+ L + + L++ + R P F+R Sbjct: 1753 QQAETA-EADSVDPEVLEIFLEEAGEIMDQLEQLLDDWRREPANEHFNR 1800 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 50/249 (20%), Positives = 94/249 (37%), Gaps = 5/249 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA E+L + ++L +L + D L + RA H++KG G +V+ E Sbjct: 790 EILEIFIEEAGEVLDTIREYLPMLLRQHDDRSALAEVRRAFHTLKGSGRMVGATVIGELA 849 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ G + +N DI L + D + + +++ Q P + Sbjct: 850 WSVENMLNRVIDGSVFMNDDIAQLLQDVTDAVPALVTDFEKRQAPSL----NTSAMEARA 905 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ-SPRRIILSRLKAGEVDLLEEELGHLTTL 185 A GE P A V +E +E + +P I GE ++ L Sbjct: 906 NALANGEIPDATAMPLVDTDTESAEETTAGTVTPEDSIEYDALPGEDEVDPVLLDIFENE 965 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 T+ GD A T L + + + T ++P L+ +++ Sbjct: 966 TETHLQTIKEYLESAGDKATAAYTDDLSRALHTLKGSANTAGIAPIAEVITPLERFIKES 1025 Query: 246 PTGRVEREK 254 ++ Sbjct: 1026 RAQNKRADR 1034 Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 85/218 (38%), Gaps = 7/218 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +EA+E+L + + L+ + D E L + RA H++KG G + + E Sbjct: 614 DEILGIFVEEAEEVLQTIHEFYPRLRQDHDDREALTEVRRAFHTLKGSGRLVGATSIGEL 673 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +ENLL+ ++ D+ L + + ++ ++ + + + + + Sbjct: 674 AWSVENLLNRVIDQTIKPTDDMFTLVDQVNARIPSLIEDFRNGET--SGDVNELIEQAEA 731 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSR----SQSPRRIILSRLKAGEVDLLEEELGH 181 LA + ET A + A++ + ++P S ++ + + Sbjct: 732 LATTRRAETGQAAEETTGEAETADEAAAEHEIEIPETPATAPTSEVEEADDSDDLIDDEI 791 Query: 182 LTTL-TDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 L + + D++ LP + + D + L V A Sbjct: 792 LEIFIEEAGEVLDTIREYLPMLLRQHDDRSALAEVRRA 829 Score = 99.1 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 65/373 (17%), Positives = 121/373 (32%), Gaps = 65/373 (17%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F DE E+ + + L + E + + + + H++KGGA + + Sbjct: 1624 DDLVGIFLDEGLEIHEAITECLDQWREEPEELAGITRLQQELHTLKGGARLSDVDPIADL 1683 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD------------- 112 + LD+ G+ + ++ L ++ LDA + S++PD Sbjct: 1684 AEAWADALDQLIAGDRD-QSAMLGLSDRAAASLKSMLDALEDSRKPDADAALINALRTAA 1742 Query: 113 --------------AASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 A D + + ++ LE GE + +L + EP +E ++ Sbjct: 1743 PAEDTSGTESQQAETAEADSVDPEVLEIFLEEAGEIMDQLEQLLDDWRREPANEHFNREA 1802 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTD--------VVKGADSLSAIL----------- 199 R L LK G ELG + + AI Sbjct: 1803 QR--ALHTLKGGARLSQLSELGDKAHAFETRLIDLGGNAPTEEQWQAITGDHDAIIALVA 1860 Query: 200 --------PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 V E + P + P E++ + Sbjct: 1861 DIRKRFESGAQAPAPQPEKAPEPVREEPAPVPKATTAEPAPTKPVPAPAKPEKSAAQARK 1920 Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQ 311 + + +IRV+ +D+L+NL GE IT+ L Q+SS D ++ ++ Sbjct: 1921 KAADAQRAAQETIRVSAPLLDELVNLAGETSITRGRLEQQSS--------DFSYTLDEMA 1972 Query: 312 RNARDLQESVMSI 324 L+E + + Sbjct: 1973 ATIERLREQLRRM 1985 Score = 98.7 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 12/260 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD + F +EA +L+ + L + + + L + R H++KGGA Sbjct: 1273 AMD-DELAAIFLEEARDLIDSTAEALHSWSEDTSNLDLLRLLQRDLHTLKGGARLADIPA 1331 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + + +H +ENL + + +N + +L D + ++A + S+ P A + Sbjct: 1332 VGDLSHELENLFEGLTEQKFSINDTLSDLLFRCHDRLAGMVEALEASEPPRPAP--DLIT 1389 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQD-------EQSRSQSPRRIILSRLKAGEVDL 174 + A+G P A+ E ++ + ++ L+A ++ Sbjct: 1390 EIHAYIDGARGTRPVTDVHTDDSAEPEDEELTLPEPELEESTEETAGAEEEELQATDLSH 1449 Query: 175 LEEELG--HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 L+ EL L D++ S D + ++ A L + + V Sbjct: 1450 LDPELVGIFLEEAYDLINSTGSALHTWSEDPSNREVAAELQRDVHTLKGGARMAGVEAIG 1509 Query: 233 STPPVLKLAAEQAPTGRVER 252 VL+ E+ G++E Sbjct: 1510 DLTHVLEDLFEKVAEGQLEA 1529 Score = 67.5 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 57/336 (16%), Positives = 121/336 (36%), Gaps = 29/336 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F +E + L ++++L + A + + RA H++KG A T G + + E Sbjct: 958 LLDIFENETETHLQTIKEYL-ESAGDKATAAYTDDLSRALHTLKGSANTAGIAPIAEVIT 1016 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E + E+R + + D++ L + + + L +++ + A D + L Q+ Sbjct: 1017 PLERFIKESRAQNKRADRDVLALISDAAGFLTQGLAQIRENPQAPLAGTDEYLERLHQVC 1076 Query: 128 -------LEAKGETPSAVTRLSVVAKSEPQ------------------DEQSRSQSPRRI 162 + E P+ + +V + +Q + + R Sbjct: 1077 EQTLTSHAQTDDEQPARKSSSQLVQLFLGEGLDIVLDAESILDRWSENPQQDEALATLRA 1136 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 L +L G D ++ L A S + PGD + A +I Sbjct: 1137 ELEQLTQGATDANLPDVAELAAALTRTYTAISKQGLPPGDDVFQTLRAGHEQLINMMDQV 1196 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTR--SNESTSIRVAVEKVDQLINLVGE 280 + P L+ A+ E ++ + +++ I +++E +D+L E Sbjct: 1197 AAGLTTEPSQELIQELEELAQATAAEPAEPDEFEQQFTDDLEEIDLSLE-MDELEQATEE 1255 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 +T++ +SE D +L + R+ D Sbjct: 1256 PELTETPPLPETSEDDQAMDDELAAIFLEEARDLID 1291 >UniRef50_C0N3I1 Hpt domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3I1_9GAMM Length = 2018 Score = 493 bits (1270), Expect = e-138, Method: Composition-based stats. Identities = 181/659 (27%), Positives = 309/659 (46%), Gaps = 32/659 (4%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ D + F +EA+ELL + + + R H++KGGA G + + Sbjct: 1242 DLDPDLLEAFTEEAEELLTSSGKAVKDWNASQQSEYDSQQLQRDLHTLKGGARLAGITPM 1301 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS--FDYIC 120 + TH E L+ + + D +L L +D + E + K A I Sbjct: 1302 ADLTHQTETLVLAVCDRKRSADEDFFDLLLRCQDKLTEMQEQLKARTAITTALSLIAEIS 1361 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS-PRRIILSRLKAGEVDLLEEEL 179 + L+ + S + + P+ EQ ++S P + R++A +D L Sbjct: 1362 MLIAGEDLQLDERSVSEQQQTDTASHVLPEIEQFLAKSAPTHVEQVRVRADLLDYLTNFA 1421 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 G ++ D V S ++ E DQ+ +E +I + Sbjct: 1422 GEVSISRDRVTQQHSAMRQQLHEMEE-------TVARLHDQLRKLEIETETQILFRYEDE 1474 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 + +E ++ + + QL + E VI + +++ L Sbjct: 1475 KLKNDSDFDPLELDRFS-------------MIQQLSRGLTESVIDLNDISRSMDTL---- 1517 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 + T + Q R DLQE +M+ R++P V R R+VR + +LGK+ +L VG Sbjct: 1518 VKETDTILLQQSRLNTDLQEGLMNTRLLPFSGVIPRLERIVRQTSAELGKKADLISVGDE 1577 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 ELD+++++R++ P+ HL+RN++ HGIE P+ RLAAGK G L L E +G + + ++ Sbjct: 1578 LELDRTILDRLVAPVEHLLRNAIAHGIEDPDTRLAAGKPDNGQLNLRIEREGSEMVMTLS 1637 Query: 420 DDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 DDG GL+ ++I KA S L + ++DE+ LI GFSTA+ V+ +SGRGVGMDVV Sbjct: 1638 DDGQGLDVDKIREKALSLNLIQLDSTPTEDELIQLILTSGFSTADNVSQLSGRGVGMDVV 1697 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 I+ + G + IQS+ G GTT I +P+TL+++ + VRV DE + +PL +V + Sbjct: 1698 NNEIRSLKGRLSIQSQPGEGTTFVIRMPMTLSVIQALLVRVQDEQYAVPLGSVNAGERIS 1757 Query: 539 EADLHP-LAGGERVLEVRGEYLPIVELWKVFN--VAGAKTEATQGIVVILQSGGRRYALL 595 D+ L + E GE+ L + + + Q +++ +SG R ALL Sbjct: 1758 VHDIKRLLDSNQPHYEFNGEHYDFRSLSSLLDKPLTLPDNPKQQLPLLLFRSGDMRVALL 1817 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 VD ++ ++V+K++ + I+ ATILGDG V I+D+ L ++ ++ + A Sbjct: 1818 VDAIVSNREIVLKSIGQQLSHITAINGATILGDGRVVFILDIPTLIETSQSGQLDSNHA 1876 Score = 81.0 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 89/277 (32%), Gaps = 20/277 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +EA+E+L +++ L+ D L I R H++KG G +V+ E Sbjct: 631 EEIATIFIEEANEVLTELD-GLMPQWITNNDQAALADIRRYFHTLKGSGRMAGATVIGEL 689 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E L+ G + + L +++ ++ L + Q+ A + + +Q Sbjct: 690 AWAVEQTLNHVIDGTRPDSDQVKALATQSQQLVPSLLARFTQANMETTAEVEALLALQQQ 749 Query: 126 LALEAKG-------ETPSAVTRLSVVAKSEPQDEQSR------------SQSPRRIILSR 166 TP S V +D + S Sbjct: 750 CLNPDSPNVETVATSTPEPHITDSAVDNELDRDVEFDLSQYTNDETLIIDASEHEPTDHG 809 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 A E D+L + ++ ++ G + + A + A + + E D Sbjct: 810 RFAIETDVLTKVELYIRRQKEMESGNNEAELTRSEEAALTSVEAYIRRLTEEDSTAKSAP 869 Query: 227 EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS 263 + S V A VER T++ + Sbjct: 870 QASLSNKLTKVEAYIQRLADETGVERYLRTQAANHQT 906 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 56/370 (15%), Positives = 128/370 (34%), Gaps = 54/370 (14%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF-RAAHSIKGGAGTFGFSVLQE 64 + Q F EA++ +A ++Q L + + Q++ F RA HS+KG A G + Sbjct: 962 DELQQIFISEAEQHIAALKQGL----KDIAFSRQIDKTFLRAVHSLKGCANVAGIKPMGL 1017 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++ + ++ L+ + + L T + +++ L +++ + + + Sbjct: 1018 IATDLDQAIKRLHSYDVVLDAEQMRLLETTVNGLEQIL--LSLTEKAEEPDIRELSDIIF 1075 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 QL + V + + ++ + ++ + + + + LE LT Sbjct: 1076 QLTPAQVETVSAPVIDPEFLVVLLEETDELLDEYTGQLSHWQQQPNDQENLEALSTTLTK 1135 Query: 185 LTDV----------------------------------VKGADSLSAILPGDIAEDDITA 210 L D KG + L+ + + ++A Sbjct: 1136 LQDTATHAKQSVIADIYAGLNKLIQQSQPQDNGLNDLLEKGYEQLNEHIESLLQNKPLSA 1195 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 F+ + +Q + VE+ P ++ E +PT ++ ++T S + + Sbjct: 1196 EQNFLDQVEQFLQQRVEI-----DSPASEVITEHSPTALIDIDETDFELPSD---LDPDL 1247 Query: 271 VDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPME 330 ++ EL+ + + D QLQR+ L+ + PM Sbjct: 1248 LEAFTEEAEELLTSSGK-----AVKDWNASQQSEYDSQQLQRDLHTLKGGARLAGITPMA 1302 Query: 331 YVFSRYPRLV 340 + + LV Sbjct: 1303 DLTHQTETLV 1312 >UniRef50_A8TEK5 CheA signal transduction histidine kinase n=1 Tax=Methanococcus voltae A3 RepID=A8TEK5_METVO Length = 1017 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 152/381 (39%), Positives = 246/381 (64%), Gaps = 8/381 (2%) Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L + +LQE VM Sbjct: 642 TVRVNIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNAVGRLNMLSTELQEEVM 698 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 S+RM+P+ +VF+R+PR VRD A L K+++ + GS ELD+++++ + +PLTHL+RNSL Sbjct: 699 SMRMIPVAFVFNRFPRTVRDTARALNKEIDFIIEGSEIELDRTVLDELAEPLTHLIRNSL 758 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIE + R GK G L L A + + I + DDG G+N E I +GL Sbjct: 759 DHGIEHADVRKQLGKPEKGLLKLIATRERDRVNIVIKDDGKGINPETIRNNVVKKGLMSR 818 Query: 443 EN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 E ++D+E LIF PGFSTAE+V+DVSGRGVGMDVV+ I+ +GG V +QS+ G G+ Sbjct: 819 EEVEKLTDNEAINLIFLPGFSTAEKVSDVSGRGVGMDVVRTKIESLGGSVSVQSEVGKGS 878 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYL 559 I + LPLT+AI+ + V++ D+++ LPL +V++ + +++ L G E ++ R L Sbjct: 879 EIILHLPLTMAIIQTLLVKLKDQIYALPLTSVLDVVSISNDEINNLEGQEAII-YRDHIL 937 Query: 560 PIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 P+ L + + + + VV+++ + L++D++IG+ ++VVK L + + G Sbjct: 938 PVTWLCDALHQYNDCS-SEEIYVVVVEKNKGKIGLILDEVIGRDEIVVKPLTGILKNING 996 Query: 620 ISAATILGDGSVALIVDVSAL 640 ++ ATILGDG VALI+D++ L Sbjct: 997 LAGATILGDGRVALILDLNNL 1017 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 79/390 (20%), Positives = 153/390 (39%), Gaps = 69/390 (17%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD + + + F EA+E L + Q+L+ L+ D E +N IFR+AH++KG A T GF Sbjct: 1 MDEMEQYRELFMTEAEEHLQSLNQNLVDLENCPEDTEIINLIFRSAHTLKGSARTLGFEH 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + + TH ME++LD R G++ +N +I++L + D ++ + + + ++ I Sbjct: 61 ISQLTHHMEDILDNIRDGKIPVNHEIMDLLFKCLDALETMVGEVADGENETSVDYESIID 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 ++ L + G + V+++ P +++ + + +GE Sbjct: 121 IIKNLKDKHLGNQVGNSGNSAKVSETSPAPKKAENNVNSADAVVSSVSGETK-CNPASSV 179 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + +K +L I AE D++ V E D + E + Sbjct: 180 SNKQSYSLKNEKTLVKIELKKDAEVDVSCEENEVSELDIDKIQDNENTENNENTEKEA-- 237 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 E + + E +D+++ G++ + + L S L+ Sbjct: 238 ------------------EIKKLNIP-ENIDEIL---GQMHQSSNTLCAISGALE----- 270 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +LQ S I SR+ + V L K+++ Sbjct: 271 ------------LSELQNSTKQI---------SRFTKSV------LDKKID--------- 294 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 +DK +++ I L+ V NS+ IE E+ Sbjct: 295 MDKEVLQMINKSLS--VMNSIAKSIENREE 322 >UniRef50_B3QWP5 CheA signal transduction histidine kinase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWP5_CHLT3 Length = 2433 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 175/658 (26%), Positives = 329/658 (50%), Gaps = 30/658 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ Q F +EA E + + LL L A + +N + R AH++KG A + Sbjct: 1626 NEIQQVFLEEASEFIDKLNVDLLDLDKAAGTIQPDLVNRVMREAHTLKGSAAMVQLHNIS 1685 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E H ME+ L R + + ++++ ++ D++ E ++ +K++ ++++ + L Sbjct: 1686 ELAHKMEDSLQFVRDNNISIPRPLVDVLFQSVDVINEMINHFKKTGTDNSSNQPELVALL 1745 Query: 124 RQL--ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + LE KG+ ++ +EP + S++ + + + + V + L + Sbjct: 1746 QSYFQQLEEKGDIVEVGKSQQLIHAAEPNEALSKASATPKAAPTLVAEQTVRIDITALNN 1805 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 L L S ++ + ++++++ + + + ++S KI+ Sbjct: 1806 LVNL--------SAELVIARNRLNNELSSIYGIINQFLKERNALGQISKKITVSIQKGAK 1857 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL-------INLVGEL-VITQSMLAQRSS 293 + A ++ + AV D L + +L +I++ + + + Sbjct: 1858 GKAAKEEEIDEDAQDLIQAIPVASAAVTFSDVLKEFSESEFDRFSDLDIISRDVKSSILN 1917 Query: 294 ELDPVNH-GDLITSMGQ----LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 D + DL T + Q + A DL ++ +RM+P++ +F R+ R VRD+A Sbjct: 1918 FDDSIKELRDLTTFINQNIVKVSNIANDLNRVIVGMRMVPVKQMFIRFSRSVRDIAKNEE 1977 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K++ L G T+LDK ++E +I+P+ H+VRN++ HG+E PE+R GKN G LIL A Sbjct: 1978 KKINLLTEGDDTKLDKMVMEDVIEPMMHIVRNAIGHGLEKPEERRKNGKNETGQLILRAY 2037 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQV 465 +G + +EV DDG G++ E++ KA +G+ + ++ + LIF PGFSTAE+V Sbjct: 2038 QKGNRVILEVEDDGKGISVEKVKRKAIEKGIITESEATTITPEATTELIFRPGFSTAEKV 2097 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 T++ GRGVG+DVV I+ + G V I++K+G GT I LPLTLAI D + + A + Sbjct: 2098 TELHGRGVGLDVVYTTIRNLKGFVNIETKEGQGTKFIISLPLTLAISDALLIEAAGNTYA 2157 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE-ATQGIVVI 584 +PL+ V E++ + + + + +R E + + L + N + VV+ Sbjct: 2158 IPLDMVFETVNIPDYAIEH-EDNKMFVNIRNERIELAYLNALLNYNSDILKFKAMLPVVV 2216 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 ++ R+ A+ +++LI + ++VVK L S+ R V G+ ATI+GDG V +I+D++ L Sbjct: 2217 IELEDRKVAVGIEKLINKEEIVVKTLGSHLRNVRGVIGATIMGDGQVVIILDMNYLLR 2274 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 92/237 (38%), Gaps = 7/237 (2%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFS 60 + + F +EA E L + + LL L + + +N + R++H++KG A Sbjct: 1335 FEPDEIQAIFLEEAYEYLEKLNEDLLELDKTSGTLQPDLINGVLRSSHTLKGSAAMVQLH 1394 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E H ME+ L R ++ ++++L D + + ++++ + D + I Sbjct: 1395 HISELGHKMEDALQVVRDKNLKTPPELVDLLFHAVDAITAMIKHFRETGKDDNDKCEAII 1454 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L + ET +T S ++ EP + Q L L +DLL+ + Sbjct: 1455 ETLVDYTQQL--ETKGEITSASSKSRFEPDEIQQAFLEEAEEYLENLN---IDLLQLDKL 1509 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 T +++ + + G A + + + + + + K+ V Sbjct: 1510 FGTEQPEIIHRVLRSAHTIKGSAAMVQLRNISELAHKMEDSLQIVRDKNLKVPRLLV 1566 >UniRef50_Q21EJ5 Response regulator receiver n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EJ5_SACD2 Length = 2336 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 184/674 (27%), Positives = 312/674 (46%), Gaps = 29/674 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D + F +EADEL ++++ + + + +AE I RA H++KGGA G + L E Sbjct: 1526 EDIVEVFLEEADELCEELDEAIHTWESDWSNAEPSEIIKRALHTLKGGARLSGMNNLGEL 1585 Query: 66 THLMENL-----LDEARRGEMQLNTDIINLFLETKDIMQEQL----DAYKQSQEPDAASF 116 TH E+ D + L + + + S+EP Sbjct: 1586 THEYESYIIGTDFDSTDEAFFAQLHSYQDKVLRGVRALHQFMRGDAAQVVASEEPTLGDV 1645 Query: 117 DYICQALRQLALEAKG---ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL-KAGEV 172 + + + +A+ + E P+ + P +++ +S + +G V Sbjct: 1646 ELVEEDEAGIAMVKQAQTSEAPATNDGEPGSSNVVPFAPKTKDESGFIPTRPKEEDSGFV 1705 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + + +P D+ E+ + I ++ + + + Sbjct: 1706 MPHASGGAQAAPQVAMKRSGPQEVVKVPADLLEELVNLAGETSISRGRLEQQVNDFGGAL 1765 Query: 233 ST-PPVLKLAAEQAPTGRVEREK---TTRSNESTSIR----VAVEKVDQLINLVGELVIT 284 + EQ +E E + + S R + +++ QL L L+ + Sbjct: 1766 EEIDGTIHRLQEQLRRLDIETEAQIIFRQEQIAESDRNFDPLEMDRYSQLQQLSRSLIES 1825 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 S LA S L D T + Q R LQE +M RM+P + R R+VR ++ Sbjct: 1826 ASDLADLRSTLTD-KVRDTETLLLQQSRINSTLQEGLMRSRMVPFSRLVPRLRRIVRQVS 1884 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 +LGK V L ELD+S++ER++ PL H++RN++DHGIE+P+ R AGK+ G ++ Sbjct: 1885 SELGKSVTFELDNIEGELDRSVLERMVAPLEHMLRNAVDHGIEMPDVRANAGKSETGRIV 1944 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAE 463 L+ +GG++ + + DDG G++ +R+ KA +GL V + +SD ++ I GFSTAE Sbjct: 1945 LTLGREGGDVTLRLADDGRGIDLKRVREKAIERGLMVDDATLSDRDIMQFILHAGFSTAE 2004 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 VT +SGRGVGMDVV I+++GG V I S+ G GT + LP T+++ + V + + Sbjct: 2005 SVTQISGRGVGMDVVHAEIKQLGGSVSINSEWGKGTEFLVRLPFTVSVNRALMVALGSDY 2064 Query: 524 FILPLNAVMESLQPREADL-HPLAGGERVLEVRGEYLPIVELWKVF---NVAGAKTEATQ 579 F +PLN + ++ +L H E E GE + L + A ++ Sbjct: 2065 FAVPLNNIEGIVRVSPFELEHYYQNPEARFEYAGENYQVRYLGSMLIDGMRAKLDGQSLP 2124 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 V++++S AL VD L+G ++VVK+L + V G+S AT++GDGSV +I+D A Sbjct: 2125 LPVLLVRSAEHTMALQVDTLLGSREIVVKSLGQQFSTVQGLSGATVMGDGSVVVILDPHA 2184 Query: 640 LQAINREQRMANTA 653 L +E +A A Sbjct: 2185 LVR--KEMALATAA 2196 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 62/172 (36%), Gaps = 1/172 (0%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E+L +E++ + + D + L + RA H++KG + E +EN+L+ Sbjct: 746 AGEVLETLEEYFPKWRADPTDNDSLVIVRRAFHTLKGSGRMVEAYDVGELAWSVENMLNR 805 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ-SQEPDAASFDYICQALRQLALEAKGET 134 + N ++ ++A+K + P A + LA + + Sbjct: 806 IIDKTVPYTAAHGNFIQLVLELTPTLVEAFKNRTANPQKALTETYMGYGAALAEGSIPDE 865 Query: 135 PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + S Q+E ++ ++ + + D + L + + Sbjct: 866 VKELAGSDAATDSAAQEEHAQQETEAPPAYYVEEDEDDDEDDRVLKEIFSSE 917 Score = 52.9 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 96/280 (34%), Gaps = 37/280 (13%) Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD---AASFDYICQALRQL-- 126 LLD + + DI+ +FLE D + E+LD + E D A + I +AL L Sbjct: 1513 LLDSIDIQDPDYDEDIVEVFLEEADELCEELDEAIHTWESDWSNAEPSEIIKRALHTLKG 1572 Query: 127 ---------ALEAKGETPSAVTRLSVVAKSEP--------QDEQSRSQSPRRIILSRLKA 169 E E S + + E QD+ R + A Sbjct: 1573 GARLSGMNNLGELTHEYESYIIGTDFDSTDEAFFAQLHSYQDKVLRGVRALHQFMRGDAA 1632 Query: 170 GEVDLLEEELGHLTTLTDVVKG-----ADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 V E LG + + + G S + E + V+ F + + Sbjct: 1633 QVVASEEPTLGDVELVEEDEAGIAMVKQAQTSEAPATNDGEPGSSNVVPFAPKTKDESGF 1692 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 + + V+ A+ A + RS ++V + +++L+NL GE I+ Sbjct: 1693 IPTRPKEEDSGFVMPHASGGAQAAP--QVAMKRSGPQEVVKVPADLLEELVNLAGETSIS 1750 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 + L Q+ D ++ ++ LQE + + Sbjct: 1751 RGRLEQQV--------NDFGGALEEIDGTIHRLQEQLRRL 1782 >UniRef50_C1A888 Chemotaxis protein CheA n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A888_GEMAT Length = 659 Score = 492 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 208/666 (31%), Positives = 329/666 (49%), Gaps = 46/666 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAE---QLNAIFRAAHSIKGGAGTFGFSVL 62 + + F E+ E L +++ LL L+ + + +FR H+IKG A G++V+ Sbjct: 10 ARYAALFQSESREHLDELDVALLALERAPASPDVSAHVATLFRGMHTIKGMAAAMGYAVV 69 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYIC 120 + H +E+ + R G ++ D + L + ++ +D +E D + Sbjct: 70 ERLAHALESRCEPLRSGAEPVSVDAMTLLFDGTSALRVSIDRAALGREDTGDEERVTALV 129 Query: 121 QALRQLALE----AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL------KAG 170 ALR + + + P+ VT SV A S R++ RL K Sbjct: 130 AALRATSPDGLRASVSGAPAPVTAASVTATSATPSRGLTPSVAARVVEIRLSDDCPLKGV 189 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 ++ +LG L + + D A D + +VL D + + Sbjct: 190 RAMIVAAKLGALGQVGQATPPQERWQ-----DDAFDGVFSVLLTSDAGDDALVDAARSAG 244 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 ++ V AE A T R ++R+ ++D L++LVGELVI++ L + Sbjct: 245 DVARVQVRAHVAEVASTAAPVR----------TVRLDARRLDTLLDLVGELVISRDRLLR 294 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 ++ + +I + R +QE V+ R+ P+ VF R+PRLVRD+A +LGK Sbjct: 295 AIEAMEQPDR-QVIAAARDAARLVSVMQEEVLQTRLQPVSQVFDRFPRLVRDVAHELGKD 353 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V + G ELD++L++ I DP+ HL+RN+LDHG+E E R AAGK G LIL A Sbjct: 354 VNFLMEGREIELDRALLDAIGDPILHLLRNALDHGVEDSETRRAAGKAPAGELILRAARD 413 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAMLIFAPGFSTAEQVTDV 468 G I I+V DDG G++R +L +A QGL ++D+ + L+ GFSTA VT++ Sbjct: 414 RGTIVIQVQDDGRGIDRLAVLRRAQHQGLVSMSETTLTDEALLPLVSRAGFSTAHAVTNL 473 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVG+DVV ++ +GG VE+++ +G GT + LP TLAI + V V E F +P Sbjct: 474 SGRGVGVDVVSTRVRALGGQVELETLEGEGTVFTLRLPATLAITRALLVEVQGETFAIPA 533 Query: 529 NAVMESLQPRE---------ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA----KT 575 V E+L + A + G R + VR E +P+V L + F + + + Sbjct: 534 VNVEEALAYHDALEVAPHALAAAGHRSAGARAITVRDEIVPLVALDEYFGLDQSSISRRG 593 Query: 576 EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIV 635 E + V ++++GGRR ALLVD L+ Q +VVK L+ P S AT+LGDG+ ALIV Sbjct: 594 EDRERHVALVEAGGRRAALLVDALVAQQDIVVKPLDVVQGAAPWFSGATVLGDGTPALIV 653 Query: 636 DVSALQ 641 DV+++ Sbjct: 654 DVASIV 659 >UniRef50_Q4UXG6 PilL protein n=7 Tax=Xanthomonas RepID=Q4UXG6_XANC8 Length = 2345 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 171/645 (26%), Positives = 295/645 (45%), Gaps = 24/645 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +E +LL + + ++ D + LN + R H++KGGA G + + + Sbjct: 1580 ELVDIFVEEGRDLLDHCDGLIARMREVPEDRDVLNGLQRDLHTLKGGARMAGINAIGDLG 1639 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA--YKQSQEPDAASFDYICQALR 124 H +E+LL+ ++ D + LF D + + L ++ + R Sbjct: 1640 HAIESLLEAVAANRTDIDRDDVRLFERGFDRLHQLLTRTGMHRAVAMPTDLVEAFETRTR 1699 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + + + V + L R++ +V + + L L Sbjct: 1700 GRSTAPQTDADVRAIAKASVEPAPLSAPIPVDGQVEEDFLPRVQQEQVRVRADLLDRLVN 1759 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 V S G DQ+ +E +I + Sbjct: 1760 HAGEVAIYRSRLEQQLGAFRGAMGELDRTNARLRDQLRRLDLETEAQIVARYQREQDQGD 1819 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 +E ++ + + + L +L Q +L S + D + Sbjct: 1820 RTFDPLELDRFSTLQQLSR---------ALNESAADLGGLQGVLEDLSRQYDGL------ 1864 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + Q R + +LQ+ +M RM+P + + R R+VR A + GKQV L L G+ ELD+ Sbjct: 1865 --LQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAATETGKQVHLVLEGTQGELDR 1922 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++R++ PL H++RNS+ HG+E PE+R AGK G++ + +G I +EV DDGAG Sbjct: 1923 NVLDRMVAPLEHMLRNSVAHGLETPEQRRDAGKPEEGSIAIRLRREGSEIVLEVADDGAG 1982 Query: 425 LNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 L+RE I + +GL + +S+ E+ LIFA GFST +QV+ ++GRGVGMDVV+ ++ Sbjct: 1983 LDREAIRRRGEQRGLIEPGQELSEAELDGLIFASGFSTFDQVSQLAGRGVGMDVVRNEVR 2042 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG V+I S +G G T + LP TLA+ + VR+ + F +P+ +V + Sbjct: 2043 QLGGSVDIHSVRGQGVTFTLRLPQTLAVTQAVFVRIGETTFAVPVGSVSGIGRISRTRYE 2102 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQLIGQ 602 GG GE + +L + A+ + Q ++++++G R A+ +DQ++G Sbjct: 2103 SGEGG---YHYAGEEYVLHDLGSLVGQPVARADGQAQVPLLLVRAGDLRAAVAIDQVLGN 2159 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 ++VVK + VPGI ATI GDG V +I+DVS L Q Sbjct: 2160 REIVVKPVGLQIASVPGIYGATITGDGRVVVILDVSPLVRRYLTQ 2204 Score = 83.3 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 95/289 (32%), Gaps = 12/289 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F +E DE L ++ Q L V + E L I R H++KG G S L E Sbjct: 746 DDIRVVFLEEFDEELVNLGQLLPVWRAAPHSQENLRPIRRVFHTLKGSGRLVGASTLGEF 805 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 + +E++L+ + ++ + ++ + A + A D A R Sbjct: 806 SWKIESMLNRVLDNSRPASPAVVAMVELAYAVLPQFNAALRDQGRISADLPDIQAVAERV 865 Query: 126 LALEAKGETPS-AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A E P+ + V + P ++ + S L+ L E HL T Sbjct: 866 AAGEEAYYVPAVQAVAEAPVIPALPAGTAPITEGTPASVDSVLREI---LEAEVATHLET 922 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + ++ A ++ ++ T F + + + A Sbjct: 923 VHGWLQAAQHGPQLVTEELLRAVHTMSGAFAMTDVPEITLVTTPAESYVKRLLGASATPS 982 Query: 245 APTGR-VEREKTTRSNESTSIRVAVEKV-------DQLINLVGELVITQ 285 A + + T++R + ++L LV EL Q Sbjct: 983 AEGVEALAATAAAIATTVTALRADAPLIPSFAPLTERLRGLVDELPEAQ 1031 >UniRef50_A0Y9Q4 Sensor histidine kinase/response regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9Q4_9GAMM Length = 2031 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 192/707 (27%), Positives = 323/707 (45%), Gaps = 70/707 (9%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 DI + + F +EADELL ++++ + E E + + R H++KGGA G + L Sbjct: 1181 DIDREILEIFLEEADELLENIDETIHSWSVERDKREYFDDMLRILHTLKGGARLAGLTSL 1240 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-------QEPDAAS 115 + +H E L +++ + + +D + EQ+ A K Q D A Sbjct: 1241 GDLSHNFETSLAHLEGKNGEIDENTLVSCQRYQDQLIEQIAAIKSGTGIDEGQQNIDGAF 1300 Query: 116 FDYICQALRQLALEAKGETPSAVT------RLSVVAKSEPQDEQSRSQSP-------RRI 162 ++ + A EA E P AV + S E E SR S Sbjct: 1301 IPIDADSVEEFASEATIEGPLAVDITVDELKPSSQTSDELDREVSRELSDLIPDARVEES 1360 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 + L++ E V+K D + P +A + L + Sbjct: 1361 AVCELESDNTKQGFPEAESAPDKIAVLKDVDPIKVSFPRSVAPLE-AVSLAVDPAIKKAP 1419 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL- 281 E V+VS ++ V GR E + + +++ VD+L V L Sbjct: 1420 QEMVKVSAQLLEELVNLAGETSISRGRAEEQISELVASLDDMQIT---VDRLQEQVRRLD 1476 Query: 282 VITQSMLAQRSSELD---------------------------------------PVNHGD 302 + T+ + R +++ D Sbjct: 1477 METEQQILYRQEQVEIEGSEGFDPLEMDRYSQLQQLSRSLLESSSDLVDIKSTLAEKSRD 1536 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + T + Q R DLQE +M RM+P + R R++R ++G+LGK+V+ L EL Sbjct: 1537 METLLIQQSRINTDLQEGLMRSRMVPFSKMVPRLRRIIRQVSGELGKKVDFHLSNIEGEL 1596 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++R++ PL H++RN++DHGIE ++R AAGK G++ L +GG I ++DDG Sbjct: 1597 DRTVLDRMVSPLEHMLRNAVDHGIESTDERDAAGKPRRGSVTLDLLREGGEIVFSLSDDG 1656 Query: 423 AGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AG+N + + KA +GL + N++D E+A I PGFSTAE+VT +SGRGVGMDVV Sbjct: 1657 AGVNFDAVKKKAIDRGLMMPNSNLADHEIAQFILQPGFSTAEEVTQISGRGVGMDVVNSE 1716 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+++GG ++IQS G G+ + LP T+++ + V V+ + + +PLN + ++ + Sbjct: 1717 IKQLGGSMDIQSVAGKGSRFTVRLPFTVSVNRALMVSVSGDSYAIPLNTIEGIVRVSPFE 1776 Query: 542 LHPLAG-GERVLEVRGEYLPIVELWKVFNV---AGAKTEATQGIVVILQSGGRRYALLVD 597 L + E G+ + + + N + +T VV+++ G A+ VD Sbjct: 1777 LEAYYQPDAPLFEYAGQPYTLRYMGGLLNRGETPSLEGHSTPLPVVLVRGGEHAIAVQVD 1836 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 L+G ++VVK L + V G+S AT+LGDG+V +I+D+ AL + Sbjct: 1837 SLMGSREIVVKPLGPQFSAVQGLSGATVLGDGNVVVILDLLALIRAD 1883 Score = 111 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 104/260 (40%), Gaps = 11/260 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +E E+LA+++Q LL + E N + RA H++KG G S + + Sbjct: 571 EILEIFVEEVAEVLAEIDQCLLQWNDNYSNQELGNVVRRAFHTLKGSGRMVGASDVGDLA 630 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ G + ++ +NL +E + + +DAY+ + D + I Sbjct: 631 WSIENMLNRVLEGSITMDAPRLNLIVEARHEIPTWVDAYEHGTDLDKSLLLSIIHRASAF 690 Query: 127 ALEAK---------GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + E T + VA +E E++ ++ ++ + + + + ++ Sbjct: 691 SDEQDPLLEPEDVIAPTLADGAGTDAVAIAEQLIEEASGEAEQKSADNVMASLFSETMDG 750 Query: 178 ELGHLTTLT--DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 EL + + D + ++T L + + + ++P ++ Sbjct: 751 ELLEIFATEAAAHGQVLDDFISHCRDLAGPAELTDELQRALHTLKGSANMAGITPVVTIV 810 Query: 236 PVLKLAAEQAPTGRVEREKT 255 L+ ++ +++ ++ Sbjct: 811 TPLEHTVKELRASQLKVDEE 830 Score = 72.2 bits (176), Expect = 7e-11, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 54/125 (43%), Gaps = 1/125 (0%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD + + F EA ++ + + A AE + + RA H++KG A G + Sbjct: 747 TMD-GELLEIFATEAAAHGQVLDDFISHCRDLAGPAELTDELQRALHTLKGSANMAGITP 805 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + +E+ + E R +++++ +++ L ++ ++ S + D+ Sbjct: 806 VVTIVTPLEHTVKELRASQLKVDEELLALLERGSLYLKAGIEQLASSPLQPFSDADHYTA 865 Query: 122 ALRQL 126 L+ L Sbjct: 866 QLKSL 870 >UniRef50_Q6LU38 Hypothetical chemotaxis histidine protein kinase, CheA n=1 Tax=Photobacterium profundum RepID=Q6LU38_PHOPR Length = 746 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 215/741 (29%), Positives = 338/741 (45%), Gaps = 102/741 (13%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD + + F DE+ +LL +ME L L+ + E +N +FRAAH+IKG AG FGF Sbjct: 1 MDEMEQAKEMFVDESLDLLQEMESALNQLKAAPENGELINLVFRAAHTIKGSAGLFGFDG 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + TH +EN+L++ R GE + +I L +D ++ ++ + + + Sbjct: 61 IVAFTHTVENVLEQVRAGERLCDDALIASLLGCRDYIESLIEQLGRETQELDERGRGLLA 120 Query: 122 ALRQLALEAK---GETPSAVTRLSVVAKSEPQDEQSR--------------------SQS 158 L +L P+ V + + Q R Sbjct: 121 RLAELTTNQPSLIENAPNTVRQHDAESPEIVQGLACRYVDNAYWHLSLRFGKDVLRNGMD 180 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 P + GE+ L L +++ + L L D D T + F A Sbjct: 181 PLSFLRYLSSLGEIVDLVPLFHTLPGGSEMDPESCYLGLELQLDSDTDKSTLMSVFEFVA 240 Query: 219 DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLV 278 D+ + ++ L + S E +R +D+L N+V Sbjct: 241 DECQIHIIPPHSELQQYVQLISDLAVNDQEANDPAHEAISLEQVLLRCGALTLDEL-NMV 299 Query: 279 ----GEL----------------------------------------VITQSMLAQRSSE 294 EL V RS Sbjct: 300 MKRPEELEQVSLLETEVAKPEPTVDVISDDEQIKQPLTSTANSKPAKVTESKRQESRSLR 359 Query: 295 LDPVNHGDLITSMGQL--------------------------QRNARDLQESVMSIRMMP 328 +D LI +G+L +++ + +RM+P Sbjct: 360 VDAHKLDQLINLVGELVIAGANTSLLARQNGEPELVESSAVVSLLVEEIRGLSLHLRMVP 419 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 ++ F R+ R+VR+++ LGK++ L + G TELDK ++E+I DPL HLVRN++DHGIE Sbjct: 420 IDDTFKRFHRVVREISRDLGKEIRLKIEGGDTELDKGVVEKIADPLMHLVRNAIDHGIEA 479 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSD 447 E RL+ GK + G + L A + G+I IEV DDG G++ ++ AKA GL +E +SD Sbjct: 480 KELRLSKGKEATGTVTLRAYYDSGSIVIEVCDDGGGVDPVKVRAKAIENGLINAEQKLSD 539 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 EV LI G +T V+D+SGRGVGMDVVKRNI+ + G +E++S++G G+ +R+ LPL Sbjct: 540 QEVLRLILEAGLTTKTAVSDLSGRGVGMDVVKRNIEALQGSIEVESQKGEGSLLRLRLPL 599 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TL+I+DG +V V +++PL+AV+E ++ E L+ + +RGE LP + L + Sbjct: 600 TLSIIDGFAVGVGTSTYVIPLDAVVECIEYSEQ----LSPNGNYVNLRGEILPFINLQRQ 655 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 F E Q +V++QSG ++ +VDQL G+ Q V+K L + ++ GIS +TILG Sbjct: 656 F--KEGHIEVKQRNIVVVQSGVQKAGFVVDQLQGELQTVIKPLSKIFSQLSGISGSTILG 713 Query: 628 DGSVALIVDVSALQAINREQR 648 G VA+I+DV AL +R Sbjct: 714 SGEVAMILDVPALIREAETRR 734 >UniRef50_C4XQQ6 Chemotaxis protein CheA n=2 Tax=Desulfovibrio RepID=C4XQQ6_DESMR Length = 732 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 175/419 (41%), Positives = 259/419 (61%), Gaps = 7/419 (1%) Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 S + P +T + + S+RV K+D L+NLVGELVI Q+ L Sbjct: 317 SAPATKPEAAAAPQTAPSAEAKAAPQTAKKDAMQSLRVDAGKLDDLVNLVGELVIAQARL 376 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 Q + L L + +++R + +L+++ + IRM+P+ FSR+ RLVRDL+ ++ Sbjct: 377 TQLAGSL---GQPALTSVAEEIERLSNELRDNTLGIRMLPIGTTFSRFRRLVRDLSSEMR 433 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K +EL G TELDK++IE++ DPL HL+RNS+DHGIE P+ RLAAGK G +ILSAE Sbjct: 434 KSIELVTEGGETELDKTVIEQLNDPLVHLLRNSIDHGIESPQDRLAAGKPEAGTIILSAE 493 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTD 467 H GG + + + DDG G+ ERI AKA +GL + ++D E LIF PGFSTA++VT Sbjct: 494 HAGGEVVLTIIDDGKGMQAERIRAKAVEKGLIPPDARLTDGECFNLIFLPGFSTADKVTS 553 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVVKR++ + G +++QS+ G GT I I LPLTLAI+DG+ ++ ++ +I+P Sbjct: 554 ISGRGVGMDVVKRSMDALRGKIDVQSEPGKGTRITIRLPLTLAIIDGLQIKAGEDQYIIP 613 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 L+ V E ++ G R +++RGE +P + L + F + G Q VV+ + Sbjct: 614 LSLVEECVELSRDGGDGTRRG-RTIQLRGEIVPYIRLREAFEMEGLPPAIEQ--VVVTRF 670 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 G R + VDQ++GQ Q V+K+L + V GIS ATI GDG+++LI+DV +L A + Sbjct: 671 EGERAGIAVDQVLGQQQTVIKSLGNYIGSVSGISGATINGDGTMSLILDVPSLVASVKR 729 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 4/157 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D ++ F +E E LA+++ LL L+ D + ++ IFRA H++KG FG Sbjct: 1 MAFD-AETRALFQEEVAENLAELDGALLELEKNPRDHDLIDRIFRAVHTLKGACDMFGLV 59 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + H +E+L D R G +++ ++++ KD L + +P+A + + Sbjct: 60 QVVALAHDLESLFDHVRGGWRRVSKELLDAAFAAKDRFAAML---AEGADPEAEADPALA 116 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ 157 Q L+ L A + Q ++ Sbjct: 117 QRLKTLLRTTDMPDEEPAGPAPGPATPAADNSQDDAE 153 >UniRef50_D2UEX4 Probable two-component system sensor histidine kinase-response regulator hybrid protein pill n=1 Tax=Xanthomonas albilineans RepID=D2UEX4_XANAL Length = 2020 Score = 490 bits (1263), Expect = e-137, Method: Composition-based stats. Identities = 176/647 (27%), Positives = 302/647 (46%), Gaps = 9/647 (1%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +E +LL ++ + L+ D + L + R H++KGGA G + + + Sbjct: 1237 RELVDIFVEEGKDLLDHCDRLVAELRAAPQDRDLLGGLQRDLHTLKGGARMAGINAIGDL 1296 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS--FDYICQAL 123 H +E+LL+ +L+ + D + + L + D Sbjct: 1297 GHGIESLLEAVAANRTELDRRDVQSLERGFDRLHQLLTLTGNHRAVAKPVDLIDAFAART 1356 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 R + E +V A+ + LE E Sbjct: 1357 RAYGVMRASEADYSVAEADHAAEPATSTGSQTWSASVAPAALSAPLPLEGALENEATIAR 1416 Query: 184 TLTDVVKGADSLSAILPGDIAEDDI-TAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + + V+ + L L E I + L + A + +E + + +L Sbjct: 1417 PMQEQVRVSADLLDRLVNQAGEVAIYRSRLEQQLGAFRGAMGELERTNARLRDQLRRLDL 1476 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E ++ + + +++ L L L + + L S LD + Sbjct: 1477 ETEAQIVARYQREQDQTQQNFDPLELDRFSTLQQLSRALNESAADLGGLQSVLDDLAR-Q 1535 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + + Q R + +LQ+ +M RM+P + + R R+VR A + GK V L+L G+ EL Sbjct: 1536 YDSLLQQQARVSSELQDGLMRARMVPFDGLVPRLRRVVRQAASETGKHVHLSLDGTHGEL 1595 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++R++ PL H++RNS+ HG+E+PE+RL AGK+ G + + +G I +EV DDG Sbjct: 1596 DRNVLDRMVAPLEHMLRNSVAHGLEMPEQRLVAGKSEDGEIAIRLRREGSEIVLEVADDG 1655 Query: 423 AGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AGL+RE I +A +GL +E +SD ++ LIFAPGFST +QV+ ++GRGVGMDVV Sbjct: 1656 AGLDREAIRRRAEQRGLIAAEAVLSDAQLDALIFAPGFSTYDQVSQLAGRGVGMDVVCNE 1715 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++++GG V+I S +G G T + LP TLA+ + V++ D F +P+ +V + Sbjct: 1716 VRQLGGSVDIHSVRGQGVTFTLRLPQTLAVTQAVFVQIGDTTFAVPVASVSGIGRIGRER 1775 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA-TQGIVVILQSGGRRYALLVDQLI 600 GG GE + +L + A A+ E Q ++++++G R A+ +DQ++ Sbjct: 1776 FEAAHGG---YRYSGEEYTLYDLGSLLGQAPARAEGLAQVPLLLVRAGDLRAAVAIDQVL 1832 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G ++VVK + VPGI ATI GDG V +I+D++ L Q Sbjct: 1833 GNREIVVKPVGLQIASVPGIYGATIAGDGRVVVILDIAPLVRRYLAQ 1879 Score = 84.5 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 6/268 (2%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 F +E DE L ++ Q L + + L I R H++KG G VL E + Sbjct: 755 RAVFLEEFDEELVNLGQLLPAWRAAPSYMDSLRPIRRVFHTLKGSGRLVGACVLAEFSWK 814 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL 128 +E++L+ G ++ ++ + + + Q +A + A D + + ++ Sbjct: 815 IESMLNRVLDGARPVSPAVVAMVEQAY-ALLPQFNAALRGDGVLHADLDALQAVIERI-- 871 Query: 129 EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV 188 A GE V A + + S IL A ++ + L Sbjct: 872 -AAGEEAYYVVASPATADAPRVGTPASVDSVLLEILDAEVATHLETIHAWLQAAPQPA-- 928 Query: 189 VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTG 248 + + G A ++ + A+ + + V LA Sbjct: 929 TEALLRAVHTMSGAFAMTEVPEITAVTGPAESYVKRALAAGIVVDAEGVRALADAGDAIA 988 Query: 249 RVEREKTTRSNESTSIRVAVEKVDQLIN 276 E S +++ L++ Sbjct: 989 ATIEELQAPSPLIPRFTELAQRLQALVD 1016 Score = 57.1 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 79/278 (28%), Gaps = 18/278 (6%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E L + L +A A+ RA H++ G + T Sbjct: 902 LLEILDAEVATHLETIHAWL-----QAAPQPATEALLRAVHTMSGAFAMTEVPEITAVTG 956 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL- 126 E+ + A + ++ + + + D + ++ Q+ P F + Q L+ L Sbjct: 957 PAESYVKRALAAGIVVDAEGVRALADAGDAIAATIEEL-QAPSPLIPRFTELAQRLQALV 1015 Query: 127 -----------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 A + + PSA + +S P E + + + + + Sbjct: 1016 DTLPQVQWPTIADDEDEDAPSAQHEDGLDPQSLPVVEFTAADDLSTFLDDTAHLPDAARV 1075 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 + + H + A S D+A A + + Sbjct: 1076 ADTVAHDCSGVAEADAAPSAQLQHTVDVAHAHANQSEQDAHVASSMPQGDDASVAAVMAG 1135 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 + A + R ++ V +++ + Sbjct: 1136 ARGEDILPVATVPDIAAMPAGREAGDQTVLVQDDQLHE 1173 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria... 691 0.0 UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 T... 650 0.0 UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae Re... 650 0.0 UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n... 646 0.0 UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blanden... 644 0.0 UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providenc... 642 0.0 UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3... 639 0.0 UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 T... 638 0.0 UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadacea... 638 0.0 UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Ta... 636 e-180 UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 T... 635 e-180 UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteoba... 635 e-180 UniRef50_B2UHV0 CheA signal transduction histidine kinase n=22 T... 634 e-180 UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 T... 634 e-180 UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9Q... 634 e-180 UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related ... 632 e-179 UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Ta... 628 e-178 UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=... 628 e-178 UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Ta... 628 e-178 UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae Re... 626 e-177 UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor ... 625 e-177 UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Ta... 624 e-177 UniRef50_Q0AYL2 Putative CheA signal transduction histidine kina... 623 e-177 UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepI... 620 e-176 UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Mori... 619 e-176 UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 T... 619 e-176 UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 619 e-176 UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Ta... 618 e-175 UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Ta... 618 e-175 UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Ta... 616 e-175 UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae R... 616 e-175 UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH7... 615 e-174 UniRef50_A3EPP7 Putative signal transduction histidine kinase (C... 613 e-174 UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Ta... 612 e-173 UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Ta... 612 e-173 UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Ta... 609 e-173 UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Ta... 608 e-172 UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 T... 607 e-172 UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium R... 607 e-172 UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Ta... 605 e-171 UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1H... 604 e-171 UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 603 e-171 UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Ta... 603 e-171 UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae R... 603 e-171 UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Ta... 602 e-170 UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-lik... 601 e-170 UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelo... 599 e-169 UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured m... 599 e-169 UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobact... 597 e-169 UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein... 597 e-169 UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-lik... 596 e-168 UniRef50_C6HWL4 Putative signal transduction histidine kinase (C... 595 e-168 UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Ta... 594 e-168 UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=C... 594 e-168 UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V49... 593 e-168 UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pse... 592 e-167 UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Ta... 592 e-167 UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Ta... 591 e-167 UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Ta... 590 e-167 UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-lik... 589 e-166 UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-lik... 589 e-166 UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 ... 588 e-166 UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Ta... 586 e-166 UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Ta... 586 e-166 UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Ta... 585 e-165 UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 585 e-165 UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Ta... 584 e-165 UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepI... 584 e-165 UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Ta... 584 e-165 UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Ta... 583 e-165 UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Ta... 582 e-164 UniRef50_C8S642 CheA signal transduction histidine kinase n=1 Ta... 582 e-164 UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Ta... 581 e-164 UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Ta... 581 e-164 UniRef50_Q6AJV5 Related to two-component system sensory/regulato... 580 e-164 UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacter... 580 e-164 UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Ta... 579 e-163 UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepI... 578 e-163 UniRef50_Q67P71 Two-component sensor histidine kinase involved i... 578 e-163 UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HS... 577 e-163 UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK... 577 e-163 UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Ta... 576 e-163 UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 T... 576 e-163 UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK... 576 e-162 UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Ta... 576 e-162 UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax... 575 e-162 UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerot... 575 e-162 UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 T... 574 e-162 UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Ta... 574 e-162 UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzl... 574 e-162 UniRef50_Q04U49 Chemotaxis protein histidine kinase n=5 Tax=Lept... 573 e-162 UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Ta... 572 e-161 UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Ta... 572 e-161 UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae... 570 e-161 UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-lik... 569 e-160 UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 T... 569 e-160 UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 T... 567 e-160 UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax... 567 e-160 UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 T... 566 e-160 UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein... 566 e-160 UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira inter... 566 e-159 UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnik... 565 e-159 UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Ta... 564 e-159 UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria R... 563 e-159 UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW... 562 e-158 UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Ta... 562 e-158 UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditroph... 562 e-158 UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis A... 561 e-158 UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepI... 561 e-158 UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 T... 560 e-158 UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Ta... 560 e-158 UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Ta... 560 e-158 UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Ta... 559 e-158 UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Ta... 559 e-157 UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Ta... 559 e-157 UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata o... 559 e-157 UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=... 557 e-157 UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Ta... 556 e-157 UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=... 556 e-156 UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 556 e-156 UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 T... 556 e-156 UniRef50_C2BUM1 Sensor histidine kinase CheA n=1 Tax=Mobiluncus ... 556 e-156 UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Ta... 556 e-156 UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobia... 555 e-156 UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Metha... 554 e-156 UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 ... 553 e-156 UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 T... 553 e-156 UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-lik... 553 e-156 UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Ta... 553 e-156 UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribac... 552 e-155 UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Lept... 552 e-155 UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 551 e-155 UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax... 550 e-155 UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acet... 549 e-154 UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales ... 547 e-154 UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related ... 547 e-154 UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alp... 546 e-153 UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Ta... 546 e-153 UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Ta... 545 e-153 UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related ... 544 e-153 UniRef50_Q7NZA8 Chemotaxis protein CheA n=2 Tax=Betaproteobacter... 544 e-153 UniRef50_UPI00016C4BDB putative CheA signal transduction histidi... 543 e-153 UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Ta... 543 e-153 UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis ME... 543 e-153 UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Ta... 542 e-152 UniRef50_B4SHY6 CheA signal transduction histidine kinase n=14 T... 542 e-152 UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 R... 542 e-152 UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Ta... 542 e-152 UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 541 e-152 UniRef50_A3J8A3 CheA Signal Transduction Histidine Kinases (STHK... 541 e-152 UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Ta... 540 e-152 UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 T... 540 e-152 UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Ta... 539 e-152 UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Ta... 539 e-151 UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Ta... 539 e-151 UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobact... 539 e-151 UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter ox... 539 e-151 UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Ta... 538 e-151 UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Ta... 538 e-151 UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 T... 538 e-151 UniRef50_B0R4J9 Taxis sensor histidine kinase cheA n=4 Tax=Halob... 537 e-151 UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter t... 537 e-151 UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachys... 537 e-151 UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio ma... 536 e-151 UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Ta... 536 e-150 UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 T... 534 e-150 UniRef50_B4X286 Hpt domain protein n=1 Tax=Alcanivorax sp. DG881... 534 e-150 UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Lept... 533 e-150 UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostri... 533 e-150 UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Ta... 533 e-149 UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-lik... 533 e-149 UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A... 532 e-149 UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia Re... 532 e-149 UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Ta... 532 e-149 UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 532 e-149 UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacte... 531 e-149 UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Ta... 531 e-149 UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vu... 531 e-149 UniRef50_C7I0R5 CheA signal transduction histidine kinase n=1 Ta... 530 e-149 UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Ta... 530 e-149 UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Ta... 530 e-149 UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Ta... 530 e-149 UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Ta... 529 e-148 UniRef50_A4VRH0 Probable component of chemotactic signal transdu... 529 e-148 UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Ta... 529 e-148 UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Ta... 527 e-148 UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Ocea... 527 e-148 UniRef50_Q4ZZ60 Response regulator receiver:CheW-like protein:AT... 527 e-148 UniRef50_A4BK22 Chemotaxis protein histidine kinase and related ... 526 e-148 UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase ... 526 e-147 UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile... 525 e-147 UniRef50_A6F1T3 Chemotaxis protein histidine kinase and related ... 525 e-147 UniRef50_A1U772 CheA signal transduction histidine kinase n=2 Ta... 525 e-147 UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 T... 525 e-147 UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Ta... 524 e-147 UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacte... 524 e-147 UniRef50_Q3JET7 CheA signal transduction histidine kinase n=2 Ta... 524 e-147 UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Ta... 523 e-146 UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Ta... 522 e-146 UniRef50_C5BLL4 Putative CheA signal transduction histidine kina... 522 e-146 UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Ta... 522 e-146 UniRef50_Q2SPH8 Chemotaxis protein histidine kinase and related ... 522 e-146 UniRef50_Q3BQK3 Two-component system sensor histidine kinase-res... 522 e-146 UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Ta... 521 e-146 UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase... 520 e-146 UniRef50_D2UEX4 Probable two-component system sensor histidine k... 520 e-146 UniRef50_Q4K4F2 Sensor histidine kinase/response regulator ChpA,... 520 e-146 UniRef50_C6NWJ7 Signal transduction histidine kinase CheA n=1 Ta... 518 e-145 UniRef50_B1M893 CheA signal transduction histidine kinase n=11 T... 518 e-145 UniRef50_B8GP53 Putative CheA signal transduction histidine kina... 517 e-145 UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 T... 517 e-145 UniRef50_D1TKM6 Putative CheA signal transduction histidine kina... 517 e-145 UniRef50_Q4UXG6 PilL protein n=7 Tax=Xanthomonas RepID=Q4UXG6_XANC8 517 e-145 UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomo... 517 e-145 UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Ta... 516 e-145 UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Ta... 515 e-144 UniRef50_B4SSF2 CheA signal transduction histidine kinase n=3 Ta... 515 e-144 UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Prot... 515 e-144 UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Ta... 513 e-144 UniRef50_C7RK06 CheA signal transduction histidine kinase n=1 Ta... 513 e-144 UniRef50_A4XPB5 CheA signal transduction histidine kinase n=1 Ta... 513 e-143 UniRef50_C7R7A2 CheA signal transduction histidine kinase n=1 Ta... 513 e-143 UniRef50_A0YJV3 Chemotaxis protein CheA n=1 Tax=Lyngbya sp. PCC ... 513 e-143 UniRef50_B3PFF8 Type IV pili sensor histidine kinase/response re... 512 e-143 UniRef50_C8PVN4 ATPase, histidine kinase-, DNA gyrase B-, and HS... 512 e-143 UniRef50_C0N3I1 Hpt domain protein n=1 Tax=Methylophaga thiooxid... 512 e-143 UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=... 511 e-143 UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Ta... 511 e-143 UniRef50_C7I5C3 CheA signal transduction histidine kinase n=1 Ta... 511 e-143 UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Ta... 511 e-143 UniRef50_B5JTR8 CheA signal transduction histidine kinase n=1 Ta... 510 e-143 UniRef50_Q21EJ5 Response regulator receiver n=1 Tax=Saccharophag... 509 e-142 UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermoc... 508 e-142 UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla mari... 508 e-142 UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Ta... 508 e-142 UniRef50_C6P319 CheA signal transduction histidine kinase n=1 Ta... 507 e-142 UniRef50_Q0VTJ1 Two-component hybrid chemotactic sensor and regu... 507 e-142 UniRef50_B3QWP5 CheA signal transduction histidine kinase n=1 Ta... 505 e-141 UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacterio... 505 e-141 UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Ta... 504 e-141 UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococ... 504 e-141 UniRef50_A4G8M3 Putative chemotaxis protein histidine kinase n=1... 504 e-141 UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein... 503 e-141 UniRef50_Q1MZ05 Sensor histidine kinase/response regulator n=1 T... 503 e-140 UniRef50_Q0KDN3 Type IV pilus protein histidine kinase/response ... 502 e-140 UniRef50_A0Y9Q4 Sensor histidine kinase/response regulator n=1 T... 502 e-140 UniRef50_B3R318 Response regulator receiver of TWO COMPONENT REG... 502 e-140 UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Ta... 502 e-140 UniRef50_B7GX99 ChpA n=13 Tax=Acinetobacter RepID=B7GX99_ACIB3 502 e-140 UniRef50_UPI00016C4288 CheA Signal Transduction Histidine Kinase... 502 e-140 Sequences not found previously or not previously below threshold: >UniRef50_P09384 Chemotaxis protein cheA n=148 Tax=Proteobacteria RepID=CHEA_SALTY Length = 671 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 564/671 (84%), Positives = 595/671 (88%), Gaps = 17/671 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMDISDFYQTFFDEADELLADMEQHLL L PE+PDAEQLNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSMDISDFYQTFFDEADELLADMEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 +LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK S+EPDAASF+YIC Sbjct: 61 ILQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKNSEEPDAASFEYIC 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSP-----RRIILSRLKAGEVDLL 175 ALRQLALEAKGET AV + ++ + ++ + ++SP RI+LSRLKA EVDLL Sbjct: 121 NALRQLALEAKGETTPAVVETAALSAAIQEESVAETESPRDESKLRIVLSRLKANEVDLL 180 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 EEELG+L TLTDVVKGADSLSA L G +AEDDI AVLCFVIEADQI FE V +P Sbjct: 181 EEELGNLATLTDVVKGADSLSATLDGSVAEDDIVAVLCFVIEADQIAFEKVVAAPVEKAQ 240 Query: 236 PVLKLAAE------------QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 ++A A REK R ESTSIRVAVEKVDQLINLVGELVI Sbjct: 241 EKTEVAPVAPPAVVAPAAKSAAHEHHAGREKPARERESTSIRVAVEKVDQLINLVGELVI 300 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 TQSMLAQRS+ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR+PRLVRDL Sbjct: 301 TQSMLAQRSNELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRFPRLVRDL 360 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE+PEKRL AGKN VGNL Sbjct: 361 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEMPEKRLEAGKNVVGNL 420 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAE 463 ILSAEHQGGNICIEVTDDGAGLNRERILAKA SQG+ V+ENM+DDEV MLIFAPGFSTAE Sbjct: 421 ILSAEHQGGNICIEVTDDGAGLNRERILAKAMSQGMAVNENMTDDEVGMLIFAPGFSTAE 480 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 QVTDVSGRGVGMDVVKRNIQ+MGGHVEIQSKQG+GTTIRILLPLTLAILDGMSVRVA EV Sbjct: 481 QVTDVSGRGVGMDVVKRNIQEMGGHVEIQSKQGSGTTIRILLPLTLAILDGMSVRVAGEV 540 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVV 583 FILPLNAVMESLQPRE DLHPLAGGERVLEVRGEYLP+VELWKVF+V GAKTEATQGIVV Sbjct: 541 FILPLNAVMESLQPREEDLHPLAGGERVLEVRGEYLPLVELWKVFDVDGAKTEATQGIVV 600 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 ILQS GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ + Sbjct: 601 ILQSAGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQGL 660 Query: 644 NREQRMANTAA 654 NREQRMA TAA Sbjct: 661 NREQRMAITAA 671 >UniRef50_A1WZ19 CheA signal transduction histidine kinase n=10 Tax=Gammaproteobacteria RepID=A1WZ19_HALHL Length = 703 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 278/689 (40%), Positives = 390/689 (56%), Gaps = 40/689 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F QTFF+E+ E L ME LL L PE+PD E LN +FRAAHSIKGGAGTFG S Sbjct: 1 MSVDLSQFLQTFFEESFEGLDTMESGLLELDPESPDPEALNNVFRAAHSIKGGAGTFGLS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH ME LLD R G+ + D +N+ L D ++ L A + Q DA + Sbjct: 61 AVSDFTHRMETLLDRLRDGKQAVTPDCVNVLLNAVDCLRGMLVAIQSDQTLDADAISTAQ 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVA-------------------------KSEPQDEQSR 155 Q L + +A A + + EPQ Sbjct: 121 QRLDEQLGQAPVGGGGATGAAAGPTAGGGDAGGDDAPPPRGGGGGGGWLIRFEPQPHLFA 180 Query: 156 SQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP--GDIAEDDITAVLC 213 + + R + L+ +E + L + L+ L D+ E + V Sbjct: 181 TGNDPRRLFLALQDLGELEVECDTSGLPPFEQLDPETCQLAWTLRLYADVPEAAVREVFE 240 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR------------VEREKTTRSNES 261 +V + ++ + +E + PV + + R + Sbjct: 241 WVEDDARLEIQPLEAAGTEEVAPVAPGQPPMPTSEESGPAAPAAGGGEARKPAARRGGGN 300 Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV 321 +SIRV EK+D LI++VGELVITQSML+Q E +L + QL+RN R+LQE+V Sbjct: 301 SSIRVDTEKIDALIDMVGELVITQSMLSQVGKEFTAERLEELQDGLAQLERNTRELQENV 360 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M IRM+P+ + +SR PR+V D + LGK V+ + G TELDK+++E+IIDPL HLVRNS Sbjct: 361 MRIRMVPISFAYSRLPRIVHDTSRALGKAVDFQMEGEQTELDKTVMEKIIDPLVHLVRNS 420 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE PE+R AAGK G + + A H+GGNI IE+ DDG G+NR+++LAKA S GL Sbjct: 421 VDHGIEPPEERAAAGKPETGTITIEAYHKGGNIIIEIADDGRGINRDKLLAKARSSGLLE 480 Query: 442 S-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 + DD+V LIF PG ST EQ T+ SGRGVGMDVVKRN++ + G++ ++S QG GTT Sbjct: 481 DGTELPDDQVFDLIFHPGLSTHEQATEYSGRGVGMDVVKRNVRSLSGNIHVRSAQGQGTT 540 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 I I LPLTL+ILDG RV D+ +I+PL +V+ESLQ + L + G V R Y+P Sbjct: 541 ITISLPLTLSILDGQLFRVGDQTYIVPLVSVIESLQVDGSKLSRVTGRGEVYHWREGYVP 600 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 IV L ++F+ + E G++VI++ + VD L+ Q QVV+K+LE+NY +VPGI Sbjct: 601 IVRLHELFDTEPVRRELAGGLMVIVEDEDTYLGVFVDDLLDQQQVVIKSLEANYLQVPGI 660 Query: 621 SAATILGDGSVALIVDVSALQAINREQRM 649 + ATILGDG+VALI+D++ L ++R R Sbjct: 661 AGATILGDGTVALILDIAGLIEMSRGGRR 689 >UniRef50_B4EYQ3 Chemotaxis protein n=6 Tax=Enterobacteriaceae RepID=B4EYQ3_PROMH Length = 739 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 435/725 (60%), Positives = 510/725 (70%), Gaps = 80/725 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELLADMEQHLL+L P+ PD EQLNAIFR+AHSIKGGA TFGF L Sbjct: 1 MDITEFYQTFFDEADELLADMEQHLLLLDPQNPDQEQLNAIFRSAHSIKGGAATFGFVKL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+TTH++ENLLD ARR EM L DIINLFLE KDIMQ+QLDA+K SQEPD +F+YIC+ Sbjct: 61 QQTTHVLENLLDSARRHEMVLTDDIINLFLEAKDIMQQQLDAHKNSQEPDEETFNYICEK 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR--------------------- 161 LRQLALE K E + + S + + + +P Sbjct: 121 LRQLALEVKEEQSTQLGEGSDSVSLTESNAPTENITPVSAVHHTDDELSKENQPLATANT 180 Query: 162 ----------IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV 211 IILS LK ++DL+ +EL HL ++ V K L A+L ++DI+AV Sbjct: 181 PNTDGLYQHHIILSDLKETDIDLMLDELKHLGEVSQVEKQHHGLEAVLKTTATQEDISAV 240 Query: 212 LCFVIEADQITFETVEVSPKISTPPVLKLAAE---------------------------- 243 LCFVIE +QI+F V + + T Sbjct: 241 LCFVIEPEQISFANVAATEEKVTSTDKTQEQAEHSPSSVTESIQPAAQTEQPATIEKNVA 300 Query: 244 ---------------------QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELV 282 P + ESTSIRVAVEKVDQLINLVGELV Sbjct: 301 ELNKNSQADEVTKVATTLPPTATPAPARKPVVAQAKTESTSIRVAVEKVDQLINLVGELV 360 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 ITQSMLAQ S L+P H DL++ + QLQRN+RDLQESVMSIRMMPMEYVFSR+PR+VRD Sbjct: 361 ITQSMLAQHSDTLEPSIHSDLLSCIAQLQRNSRDLQESVMSIRMMPMEYVFSRFPRVVRD 420 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 LAGK+ K+VEL ++GSSTELDKSLIE+IIDPLTHLVRNSLDHGIE+P R+AAGK G Sbjct: 421 LAGKMHKKVELNMIGSSTELDKSLIEKIIDPLTHLVRNSLDHGIEMPADRIAAGKPEAGQ 480 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTA 462 L LSAEHQGGNICIEVTDDGAGLNRERIL KA S GL VSENMS++EVAMLIFAPGFSTA Sbjct: 481 LTLSAEHQGGNICIEVTDDGAGLNRERILKKAISSGLAVSENMSNEEVAMLIFAPGFSTA 540 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 E VTDVSGRGVGMDVVKRNIQ+MGG ++I + G GT IRILLPLTLAILDGMSV+V DE Sbjct: 541 EVVTDVSGRGVGMDVVKRNIQEMGGQIQISFEVGKGTRIRILLPLTLAILDGMSVKVNDE 600 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 VFILPL V+ SLQP E D++PLAG E++L+VRGEYLP++EL + FN+ GA+T+ TQ I Sbjct: 601 VFILPLGTVVSSLQPEEEDIYPLAGDEKLLQVRGEYLPLIELHRTFNIEGAQTDITQAIA 660 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 VI+QS GRRYALLVD+L+GQHQVVVKN+ESNYRKVPGISAATI+GDGSVALI+DV LQ Sbjct: 661 VIVQSAGRRYALLVDKLVGQHQVVVKNIESNYRKVPGISAATIMGDGSVALILDVPELQR 720 Query: 643 INREQ 647 ++ Q Sbjct: 721 LSHSQ 725 >UniRef50_B2AI50 Chemotactic sensory histidine kinase (Soluble) n=14 Tax=Proteobacteria RepID=B2AI50_CUPTR Length = 675 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 403/667 (60%), Positives = 476/667 (71%), Gaps = 16/667 (2%) Query: 1 MSMDIS--DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS+DI FYQTFF+EA+ELL +MEQ LL L EAPDAE LNAIFRAAHSIKGGA TFG Sbjct: 6 MSVDIDITQFYQTFFEEAEELLVEMEQLLLGLDIEAPDAEHLNAIFRAAHSIKGGAATFG 65 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F+ L ETTH+ ENLLD RR E+ L II+ FLETKD++Q+QL+AY+ EPD + Sbjct: 66 FAALTETTHIFENLLDRTRRQELALTRTIIDTFLETKDVLQDQLNAYRNGTEPDPETLAR 125 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 IC L+QLA EA G + + + + + +I L ++ A + LL EE Sbjct: 126 ICAVLQQLAQEAAGHDAAPAPAPAPAPVAAAAPAAAPAGGGLKIRLIKVSASDQALLREE 185 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L +L +T + L L + DDI AV CFVI+ DQI E +P + P Sbjct: 186 LANLGDITGQQETNGELVVWLNTQCSADDIIAVCCFVIDIDQIVIEAAAGAPAAAPAPAP 245 Query: 239 KLAAEQA--------------PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVIT 284 A A ++ SIRV EKVDQ+INLVGELVIT Sbjct: 246 AEVAVPAPAPVAAAPAPAPAAREKAKAAPAPAPAHGEGSIRVPTEKVDQIINLVGELVIT 305 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLA 344 QSMLAQ +S LDPV L + MGQL+RNARDLQE+VMSIRMMPM+YVFSR+PRLVRDLA Sbjct: 306 QSMLAQTASSLDPVLFDRLFSGMGQLERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDLA 365 Query: 345 GKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLI 404 KLGKQ++L G +TELDKSLIERIIDPLTHLVRNSLDHGIE P+KR+AAGK+ G LI Sbjct: 366 SKLGKQIDLVTFGKATELDKSLIERIIDPLTHLVRNSLDHGIETPDKRVAAGKDPTGQLI 425 Query: 405 LSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQ 464 LSA+H GGNI IEV+DDG GLNRERILAKA GL VSE ++D+EV LIFAPGFSTAE Sbjct: 426 LSAQHHGGNIVIEVSDDGGGLNRERILAKAIQNGLPVSETITDEEVWQLIFAPGFSTAEV 485 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 +TDVSGRGVGMDVVKRNIQ+MGGHV+I S+ G GTTIRI+LPLTLAILDGMSV+V +E F Sbjct: 486 ITDVSGRGVGMDVVKRNIQEMGGHVQISSRPGLGTTIRIVLPLTLAILDGMSVKVGEETF 545 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI 584 ILPLN VMESLQP+ D+H A +RV+ VRGEYLP++E+ +VFNVA A E TQGI VI Sbjct: 546 ILPLNCVMESLQPKAEDVHTAANSDRVMHVRGEYLPLLEMHRVFNVADALQEPTQGIAVI 605 Query: 585 LQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 LQ+ G+R+ALLVDQLIGQHQVV+KNLE+NYRKVP ISAATILGDGSVALIVDV ALQ Sbjct: 606 LQAEGKRFALLVDQLIGQHQVVLKNLETNYRKVPCISAATILGDGSVALIVDVGALQRTG 665 Query: 645 REQRMAN 651 ++ Sbjct: 666 VRRQEPA 672 >UniRef50_A4BJG3 Chemotaxis protein CheA n=1 Tax=Reinekea blandensis MED297 RepID=A4BJG3_9GAMM Length = 651 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 270/640 (42%), Positives = 372/640 (58%), Gaps = 3/640 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F++ FF+E+ E L +EQ L+ L P PDAE LN IFRAAHSIKG +G FGF+ Sbjct: 1 MSMDLGQFHEVFFEESQEHLDALEQGLMALDPSQPDAELLNTIFRAAHSIKGSSGVFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L + TH+MEN LDE R+ Q ++ L D ++ + Y+ + D Sbjct: 61 ALGDITHVMENRLDEWRKEISQPQASQVDHLLTVVDALRHLVSVYQNGEPVDEQWVQDTI 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L + + V + + + + G EE Sbjct: 121 DGLNAKFDAYEIKNSEQSQSSEPVVDEDDDEGFGFFEPLEAEAEADDDVGYGFFEEEPAP 180 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + + + + + E +V S P K Sbjct: 181 DEDEGFGFFEEPEPEAEFAAANTEAE--DEGWGLFEEPGSSDTSPPQVDAVESKPTETKA 238 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A+ A + +IRV VEKVD LINLVGELVITQSMLA LD N Sbjct: 239 PAKSAVSNPTTESAQAAQKSGGTIRVNVEKVDSLINLVGELVITQSMLAMVGQNLDDANQ 298 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 + + L RN R++QESVMSIRM+P+ +VF+R+PR+ RD AGKLGK+V L + G T Sbjct: 299 EKMNGVIETLHRNTREIQESVMSIRMLPISFVFNRFPRVARDTAGKLGKKVNLVIEGGDT 358 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 E+DK L+E++ DPLTHL+RNS+DHGIE P RL AGK G + LSA QGGNI I V D Sbjct: 359 EIDKGLVEQLADPLTHLMRNSIDHGIESPSDRLQAGKPETGTVRLSARQQGGNIIISVID 418 Query: 421 DGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 DGAGLNR++IL KA +G+TV+ + D+ + LIF PGFSTA+ VTDVSGRGVGMDVVK+ Sbjct: 419 DGAGLNRDKILNKARERGMTVNADSPDEAIWPLIFEPGFSTADAVTDVSGRGVGMDVVKK 478 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 N+ +GG ++I S G GTT+ ++LPLTLAILDGM+V + E +I+PL ++ES+QP Sbjct: 479 NLSNLGGRIDIDSVPGYGTTLSLILPLTLAILDGMAVSLGSETYIIPLGNIVESIQPNAE 538 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + L G+ +L VRG Y P+V L +V +V T GIV++ +SG RR+ +LVD+L+ Sbjct: 539 QVKTL-NGDELLNVRGHYWPVVRLHRVMSVRPRFERITDGIVILTESGKRRFGILVDELL 597 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 GQ QVV+K+LE +Y+++PG+ AT++GDG VA I+D+ +L Sbjct: 598 GQQQVVIKSLEQHYKRIPGVGGATVMGDGQVAFILDLESL 637 >UniRef50_UPI0001C34617 chemotaxis protein chea n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI0001C34617 Length = 685 Score = 642 bits (1656), Expect = 0.0, Method: Composition-based stats. Identities = 386/667 (57%), Positives = 476/667 (71%), Gaps = 26/667 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDI++FYQTFFDEADELL DMEQHLL L P PD+EQLNAIFR+AHSIKGGA TFGF+ L Sbjct: 1 MDITEFYQTFFDEADELLRDMEQHLLELDPFDPDSEQLNAIFRSAHSIKGGAATFGFTQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TTH +ENLLD+AR E+ L DII++FL+ KD+M QLDAYK PD +F IC+ Sbjct: 61 QNTTHTLENLLDKARHDELTLTPDIIDVFLDAKDVMASQLDAYKNDSLPDEDTFKRICEV 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR----IILSRLKAGEVDLLEEE 178 L ++ A+ + + ++ Q I L++LK EVDLL +E Sbjct: 121 LSRVENRAEEVAETGTAIAETKVEDAVVEDTPAKQGEYSHYFMISLNQLKENEVDLLADE 180 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP-------- 230 L L K A+SL A + + DDI+ VLCFV++ QI+ E + + Sbjct: 181 LSLFGHLYHTEKTANSLQAWVGTNTDIDDISGVLCFVVDESQISHEVISFADCLAFSKEE 240 Query: 231 --------------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + A APT + +S+SIRVAVEKVDQLIN Sbjct: 241 TLLNDDKVAANEVTEPQVDTPQSSAKPAAPTTAKKTAIAKPKGDSSSIRVAVEKVDQLIN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LVGELVI QSML Q S +D + DL++S+ QL+RN+R LQESVMSIRMMPM+YVFSR+ Sbjct: 301 LVGELVIIQSMLTQHSQHVDQNEYSDLLSSIVQLERNSRALQESVMSIRMMPMDYVFSRF 360 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR+VRD+A KLGK++EL + GSSTELDKSLIERI+DPL HLVRNSLDHGIE PE R+A G Sbjct: 361 PRMVRDIASKLGKKIELKVEGSSTELDKSLIERIVDPLNHLVRNSLDHGIEKPEVRVANG 420 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFA 456 K G L L+A HQ GNICIEV DDGAGLNRERILAKA SQG+ V + MS+DEVAMLI A Sbjct: 421 KPEAGTLTLAAAHQSGNICIEVRDDGAGLNRERILAKAKSQGMNVHDGMSNDEVAMLIMA 480 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 PGFSTAE VTDVSGRGVGMDVVKRNIQ MGG ++I +G GT IRILLPLTLAILDGMS Sbjct: 481 PGFSTAEVVTDVSGRGVGMDVVKRNIQDMGGRIQIGFTEGKGTIIRILLPLTLAILDGMS 540 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V+VA++VFI+PL+A++ +LQPR+ D++ LAG E++L VRGEYLP+VEL +VF++ A+ Sbjct: 541 VKVAEDVFIVPLSAIISTLQPRQEDIYRLAGEEKMLLVRGEYLPLVELHQVFSIEEAERN 600 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 IV+I+Q+ G R+ALLVD+L+GQ QVVVKN+ESNYRK+PGISAATI+GDGSVALI+D Sbjct: 601 LDNSIVLIIQNAGHRFALLVDKLVGQQQVVVKNIESNYRKIPGISAATIMGDGSVALILD 660 Query: 637 VSALQAI 643 V+ LQ + Sbjct: 661 VAELQKM 667 >UniRef50_C3LX06 Chemotaxis protein CheA n=31 Tax=Vibrio RepID=C3LX06_VIBCM Length = 720 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 266/715 (37%), Positives = 396/715 (55%), Gaps = 64/715 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPSQVDLEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E LD R + QL ++ L++ D+++ LD+ +Q D A + Sbjct: 61 EISEFTHAVETYLDLIRNQKKQLTAQGVDTLLKSCDVIRNMLDSREQETAIDEALKQQVG 120 Query: 121 QALRQLALEAKGE--------------TPSAVTRLSVVAKSEPQDEQSR----------S 156 L+ L + + T + + + Q + R Sbjct: 121 AELQALLADQGADRVMSQAQPVSSNTHTSNMHADAIAIPDATAQGWRIRFVPHETLFYSG 180 Query: 157 QSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCF 214 P RI+ + G +E + L L ++ S + L GD++E+D+ + + Sbjct: 181 NDPLRILRELRELGSEYQIELDHQALPELAEIDPELCYLSWTIRLTGDVSENDVRELFDW 240 Query: 215 VIEADQITFETVEVSPKISTPPVLKLAAEQA----------------------------- 245 V + + + + + A Sbjct: 241 VEDECDLHIAPILSDEASAHVEDEQAAPAATLQSNPQTQVEPVAIVDLPAVEPPVATVAP 300 Query: 246 ----PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 P + + +SIRV +EKVD LINLVGELVITQSML + ++ Sbjct: 301 VIANPKESATNKPAKTDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGNDFSMDKLD 360 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L + G TE Sbjct: 361 KLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQIQGEQTE 420 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK G + L A HQGG+I +E++DD Sbjct: 421 LDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLKAFHQGGSIIVEISDD 480 Query: 422 GAGLNRERILAKAASQGLTVSE----NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 GAG++ +++ KA +G+ + +++D ++ LIFAPGFSTAEQV+D+SGRGVGMDV Sbjct: 481 GAGIDCDKLWRKAVEKGVLEPQTQRSDLTDKQIINLIFAPGFSTAEQVSDISGRGVGMDV 540 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+RNI+++GG +E+ S+ G G+ I LPLTLAILDG V+VAD+V+++PL ++ES+Q Sbjct: 541 VRRNIEELGGQIEVDSELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLTIVESIQI 600 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 A + AGG + +R E +PI+ L + + + ++ ++S G R LLVD Sbjct: 601 NTASVKHAAGGIELYRLREENIPILRLQDELAMGRS-GSLEKRLICFVESAGHRVGLLVD 659 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+ L A ++ ++T Sbjct: 660 DLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKRSSSST 714 >UniRef50_B9MM01 CheA signal transduction histidine kinase n=12 Tax=Clostridia RepID=B9MM01_ANATD Length = 666 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 202/668 (30%), Positives = 358/668 (53%), Gaps = 34/668 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT GF + Sbjct: 1 MDMSQYLGMFIEEARDHIQSLNDNMLKLEENPEDLQIVNEIFRSAHTLKGMAGTMGFVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+ TH MEN+L AR G++++N +I+++ +T D ++ LD + + ++ A Sbjct: 61 QKLTHAMENVLAAARDGKLKVNPNIMDILFKTVDALESYLDVIIATGTEGQETNLHLVNA 120 Query: 123 LRQLALEAKGETPSAVTRLS------------VVAKSEPQDEQSRSQSPRRIILSRLKAG 170 L + + + + + + ++ Q LK+ Sbjct: 121 LNAILGKPAEDVAVSSATKAGKKYEYDEFVVRAIERAWDQGFNVYRFDVELDQNCLLKSA 180 Query: 171 EVDLLEEELGHLTTLTDVVKGAD---------SLSAILPGDIAEDDITAVLCFVIEADQI 221 L+ + L + S + + I + + E ++ Sbjct: 181 RAYLVFRAVEELGEIIHSKPSVQDIEDEKFDFEFSITVISKQPIEKIRDRILSISEIREV 240 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVE-------REKTTRSNESTSIRVAVEKVDQL 274 ++ ++ Q T E +++ + S ++RV +E++D L Sbjct: 241 KALEIKSGEVSMAEEKEEIEEVQQETQVQETVKVVRQQKQESLQKTSKTVRVDIERLDVL 300 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 +NLV EL+I +S + + + + S+ L+R L ++VM +RM+P+E VFS Sbjct: 301 MNLVSELIIIKSRIEGLAKKYND---RQYEESIEYLERITTSLHDAVMKVRMVPVERVFS 357 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+PR++RDLA +LGK+ EL + G TE+D+++++ + DPL HL+RN+ DHGIE P++R+ Sbjct: 358 RFPRMMRDLARELGKEFELVMSGEDTEVDRTIVDELGDPLIHLLRNAADHGIEDPDERVK 417 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVAM 452 GK G + LSA H G N+ IEV DDG G++ E++ KA +GL + +++ E+ Sbjct: 418 NGKPRSGLIKLSAYHDGNNVVIEVEDDGKGIDLEKVKQKAIEKGLLKEDQIELTEQEIID 477 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 +F P FST ++VT++SGRGVG+DVVK I+++GG VE+++++G GT I LPLTLAI+ Sbjct: 478 FLFMPSFSTKDKVTNLSGRGVGLDVVKTKIEQLGGMVEVKTQKGKGTKFVIRLPLTLAII 537 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 + V V DE++ +P+ ++ E + + D+ + G+ ++ +R + +PI L + + Sbjct: 538 QALLVTVHDEIYAIPVASIREIVDVAKEDIKVVQKGKEIIMLRNQVIPIKHLHSIVGLEP 597 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 + + VVI++ G + ++VD+L+GQ +V+K+L V IS ATILGDGSVA Sbjct: 598 VL-DKKKFTVVIVRRGEKLTGIIVDKLLGQQDIVIKSLGKYLEGVRLISGATILGDGSVA 656 Query: 633 LIVDVSAL 640 +I+D + L Sbjct: 657 MILDPNML 664 >UniRef50_B2SVD4 Chemotaxis protein CheA n=13 Tax=Xanthomonadaceae RepID=B2SVD4_XANOP Length = 669 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 289/670 (43%), Positives = 404/670 (60%), Gaps = 21/670 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+ F+ TFF+E+ E L ME LL L+ D E +N++FRAAHSIKGGA TFGF Sbjct: 1 MSMDLQRFHATFFEESREGLDAMEAGLLSLEEGNRDPEIINSVFRAAHSIKGGAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH++E LLDE R + QL + ++ L + D+++ L + D + + Sbjct: 61 AIAGLTHVLETLLDELRSNKRQLEPNAVDAMLGSVDVLRALLREAEHGTPADPTAVKAVH 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKS-----EPQDEQSRSQSPRRIILSRLKAGEVDLL 175 L + ++ P S + I+ L+ + Sbjct: 121 TRLNAVLAGEAPVAAVVAKPKEEEPEAWHIGFTPAPSLFMSGNDPLRIIRELEHLGPLQI 180 Query: 176 EEELGHLT--TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L + D ++ + L G I + I +V++ ++ + V Sbjct: 181 AARLERMPGFENIDPLEAYLAWDLGLIGKIPRNKIEDTFAWVVDDCELDIRPMAVPGPPP 240 Query: 234 T-------------PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE 280 + AA + K + +SIRV+V+KVD LINLVGE Sbjct: 241 SLAVDAPAAAPGAAVTAAPSAAAEPAAAAATPAKAAAAEAESSIRVSVDKVDALINLVGE 300 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVITQ+ML Q S+ LDP + L + L+RN RDLQE+V+ +RM+P++ VF R+PRLV Sbjct: 301 LVITQAMLKQVSAGLDPAHAEQLFAGLDLLERNTRDLQEAVIGVRMLPVDAVFRRFPRLV 360 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDL+ +LGKQV L +G STELDK LIE+I DPL HLVRNS+DHG+E+P+ R A+GK+ Sbjct: 361 RDLSSRLGKQVRLRTIGESTELDKGLIEKIADPLVHLVRNSIDHGLEMPDARRASGKDET 420 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFS 460 G + L+A HQGG+I IEV+DDG GLNR +IL KAA +G+ V +N +D +V LIFAPGFS Sbjct: 421 GTITLAASHQGGHIVIEVSDDGRGLNRAKILEKAAERGIAVPDNPTDAQVWDLIFAPGFS 480 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 TA+ VTD+SGRGVGMDVV+RNIQ +GG V+++S G+GT + I LPLTLAILDGM+V VA Sbjct: 481 TADAVTDLSGRGVGMDVVRRNIQGLGGEVQLESNAGSGTRVLIRLPLTLAILDGMTVSVA 540 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 E ILPL+ V+E+LQP D+ +AG RVL VRGEYLPI+ L + G + + + Sbjct: 541 GETLILPLSYVLEALQPAAEDIRSMAGDGRVLRVRGEYLPILSLTNYYGFGGQQ-SSQES 599 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +VV+++ G++ AL VD+L+GQ QVVVKN+E+NYR++PG+S ATILGDG V+LIVD+ L Sbjct: 600 LVVVVEGDGQKIALEVDELLGQQQVVVKNIENNYRRIPGVSGATILGDGRVSLIVDIGGL 659 Query: 641 QAINREQRMA 650 + + A Sbjct: 660 VRSLKVPQAA 669 >UniRef50_A4XIZ8 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XIZ8_CALS8 Length = 664 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 206/666 (30%), Positives = 368/666 (55%), Gaps = 32/666 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +EA + + + ++L L+ D + +N IFR+AH++KG AGT G+ + Sbjct: 1 MDMSQYLGMFIEEAKDHIQSLNDNMLKLEENPEDLQLINEIFRSAHTLKGMAGTMGYVNM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q+ TH MEN+L AR G++++N++I+++ +T D ++E LD + + + + Sbjct: 61 QKLTHAMENVLAAARDGKLRINSNIMDVLFKTVDALEEYLDVIVATGTEGSEQNLQLVNS 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS--------------PRRIILSRLK 168 L + + E + + + + + ++ ++ +L + Sbjct: 121 LNGILGRPQEEMVVSAKKATAQLEYDEFVIRAIERAYSQGFNVYKFDIELDPNCLLKSAR 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADS------LSAILPGDIAEDDITAVLCFVIEADQIT 222 A V EELG + V+ + S + + I + + E + Sbjct: 181 AYLVFKAVEELGEIINSKPPVQDIEDEKFDFGFSITIVSKEPLEKIRERILSISEIREAK 240 Query: 223 FETVEVSP------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 V+V + ++ + +A E+++ S ++RV +E++D L+N Sbjct: 241 GIEVKVGDVKVEGTQQEVGRTEEVQSTEAVKVVREQKQEGLQRTSKTVRVDIERLDVLMN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LV EL+I +S + + + + S+ L+R L ++VM +RM+P+E VFSR+ Sbjct: 301 LVSELIIIKSRIEGFAKKYND---RQYEESIEYLERITTSLHDAVMKVRMVPVERVFSRF 357 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR++RDLA +LGK+ EL + G TE+D+++++ + DPL HL+RN+ DHGIE PE+R+ G Sbjct: 358 PRMMRDLARELGKEFELVMSGEDTEVDRTIVDELGDPLIHLLRNAADHGIEEPEERVKNG 417 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--MSDDEVAMLI 454 K G + LSA H G N+ IEV DDG G++ E++ KA +GL + +S+ E+ + Sbjct: 418 KPRSGLIKLSAYHDGNNVVIEVEDDGKGIDIEKVKKKAIEKGLLKEDQLDLSEQEIIDFL 477 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F P FST ++VT++SGRGVG+DVVK I+++GG +E+++++G GT I LPLTLAI+ Sbjct: 478 FLPSFSTKDKVTNLSGRGVGLDVVKTKIEQLGGMIEVKTEKGKGTKFVIRLPLTLAIIQA 537 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + V V DE++ +P+ ++ E + D+ + G+ ++ +R + +PI L K+ + Sbjct: 538 LLVTVKDEIYAIPIASIKEIIDVARDDIKVVQKGKEIIMLRNQVIPIKYLHKIVGLEADL 597 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 + + VVI++ G + ++VD+L+GQ +V+K+L + +S ATILGDGSVA+I Sbjct: 598 -DKKKYTVVIVKRGEKLTGIVVDKLLGQQDIVIKSLGKYLEGIRLVSGATILGDGSVAMI 656 Query: 635 VDVSAL 640 +D + L Sbjct: 657 LDPNML 662 >UniRef50_A1HN15 CheA signal transduction histidine kinases n=3 Tax=Clostridiales RepID=A1HN15_9FIRM Length = 677 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 230/681 (33%), Positives = 363/681 (53%), Gaps = 46/681 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MDIS + F +E E L + + LL L+ + + L+ IFR+AH+IKG + T GF+ + Sbjct: 1 MDISQYLGIFLEETREHLQTLNRCLLELEHDPGNLAVLDEIFRSAHTIKGMSATMGFTAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYIC 120 E TH MEN+LD R+ ++ N++II+ + D +++ ++ + E D Sbjct: 61 AELTHEMENILDLLRKSVLKANSEIIDALFKCVDTLEQSVEQVAANGETSLDIKPLVTTL 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVA------------KSEPQDEQSRSQSPRRIILSRLK 168 AL + + + PS+V V A + Q ++ R LK Sbjct: 121 TALAKGEMFTDSKAPSSVAARPVSAIDLNDTEVKIIQAANSQGLRAYEVQVRLREGCLLK 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEAD 219 + ++ L L + + A+ L + D D I L + E + Sbjct: 181 SARAYMVMSTLDTLGDVIKSIPPAEELEKENFDLSFQTVVITDAEPDKIKQALLSIAEIE 240 Query: 220 QITFETVEVSPKISTPPVLKLAAEQAP---------------TGRVEREKTTRSNESTSI 264 + E +P++ + ++ + + S+ Sbjct: 241 SVNVILCEATPRLEKAAAVAGQSDAESRRIGGKHDEETEKTVNPGLNTTADKKVKGGQSV 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +EK+D L+NLVGELVI ++ L Q DL+ ++ Q+ R DLQ VM + Sbjct: 301 RVDIEKLDTLLNLVGELVINKTRLEQIGITH---RLPDLVETIEQMDRVTTDLQAVVMKV 357 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF+R+PR++RDL+ +L K+V L + G TELD+++I+ I DPL HL+RN++DH Sbjct: 358 RMVPVGQVFNRFPRMIRDLSRELNKEVNLIIQGEETELDRTVIDEIGDPLVHLLRNAIDH 417 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV--- 441 GIE PE+R A GKN VG + L A H+G N+ I V DDG G+N E + KA +GL Sbjct: 418 GIESPEEREAKGKNPVGEIRLIARHEGNNVIIVVEDDGRGINPETVKQKAVQKGLITQAE 477 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 ++ M E LIF PGFSTA+ +TDVSGRGVGMD VK I+ +GG V++++K G+ Sbjct: 478 ADKMDVAEAIRLIFLPGFSTADNITDVSGRGVGMDAVKTKIESLGGMVDVETKVNEGSKF 537 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 +I LPLTLAI+ + V+V +E++ +PL+++ +++ D+ + E V+ +RG+ +PI Sbjct: 538 KIRLPLTLAIIQALLVKVGEEIYAIPLSSIDSTIKVGLPDIKTIQNHE-VILLRGQIIPI 596 Query: 562 VELWKVFNVAGA-KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 V L KV NV + + VVI+ G +R ++VD LIGQ ++V+K+L + I Sbjct: 597 VRLAKVLNVPETGQKNQEELFVVIIHMGEQRAGVVVDTLIGQQEIVIKSLGKLLAGIKVI 656 Query: 621 SAATILGDGSVALIVDVSALQ 641 + ATILG+G VALI+DV +L Sbjct: 657 AGATILGNGQVALILDVGSLM 677 >UniRef50_B9L827 Chemotaxis protein CheA n=43 Tax=Epsilonproteobacteria RepID=B9L827_NAUPA Length = 834 Score = 635 bits (1638), Expect = e-180, Method: Composition-based stats. Identities = 232/694 (33%), Positives = 368/694 (53%), Gaps = 48/694 (6%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +I + + F EA E++ +M+Q L+ L+ D + LN IFR AH+IKG F Sbjct: 1 MDEIQELLEDFLVEAFEMIEEMDQDLVELENSPDDLDLLNKIFRVAHTIKGSGSFLNFDK 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE--PDAASFDYI 119 L TH ME +LD+AR+GE+ + +I+++ LE+ D M+ L+ + + + + I Sbjct: 61 LTRLTHHMEAVLDKARKGELTITPEIMDVILESVDAMKGILEYIRDNGDDSAPDIDIEPI 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRS---------QSPRRIILSRLKAG 170 L + ++ + SA T + + + ++ I L L Sbjct: 121 VVRLDAIVNGSQASSKSAQTENTSEKNEGEKKPKIVGNINLDEITLENADEIDLDSLSPE 180 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA------------ 218 E+D + E L L G +L I + E D+ ++ +A Sbjct: 181 ELDAVLEHLVELRNKKPKKVGNINLDEITLENADEIDLDSLTPEEADAVLEHLVELRNKP 240 Query: 219 ----------------DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST 262 D + + + K + E +K S Sbjct: 241 ADKTENKQTEEKDEKKDNAQSQETKKEESKNELTPAKKQELTNEQKKKEVKKAISSVAEQ 300 Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH-----GDLITSMGQLQRNARDL 317 +IRV V+++DQL+NL+GELV+ ++ L + ++++ +L + + DL Sbjct: 301 TIRVDVKRLDQLMNLIGELVLAKNRLIKIYNDVEERYEGEKFLEELNQVVSSISIVTTDL 360 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q +VM RM+P+ VF+++PRLVRDL+ +LGK+V L + G TELDKS+IE I DPL H+ Sbjct: 361 QIAVMKTRMLPIGKVFNKFPRLVRDLSRELGKKVRLIIEGEDTELDKSIIEEIGDPLVHM 420 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RNS+DHGIE PE+R+ GK G + L A ++G I IE+ DDG G++ E + KA + Sbjct: 421 IRNSVDHGIEPPEERVKLGKPEEGTVWLRAYNEGNMIVIEIKDDGRGMDPEVLKRKAIEK 480 Query: 438 GLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 G+ + NMSD E MLIF PGFSTA +VT VSGRGVGMDVVK NI+K+ G +E+ S Sbjct: 481 GIITESEAANMSDKEAFMLIFKPGFSTAAKVTSVSGRGVGMDVVKTNIEKLNGIIEVDSA 540 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G G+T ++ +PLTLAI+ + V +++F +PL+ V+E+++ E D++ + G+ VL++ Sbjct: 541 PGKGSTFKLKIPLTLAIIQALLVASQEDLFAVPLSNVIETVRIVEEDIYTIE-GKSVLKL 599 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 R E LP+V + +F + VVIL G + L+VD+ IGQ ++V+K+L Sbjct: 600 REEVLPLVNMADIFEIEKVLEPEKYLYVVILGLGATKIGLIVDRFIGQEEIVIKSLGEFL 659 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINREQR 648 + +PGI+ ATI GDG V LI+DV +L + +E Sbjct: 660 KGIPGIAGATIRGDGRVTLIIDVGSLMRLAKETH 693 >UniRef50_B2UHV0 CheA signal transduction histidine kinase n=22 Tax=Proteobacteria RepID=B2UHV0_RALPJ Length = 724 Score = 634 bits (1637), Expect = e-180, Method: Composition-based stats. Identities = 368/697 (52%), Positives = 462/697 (66%), Gaps = 45/697 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S F+ FF+EA+ELL DME+ LL L P ++ LNAIFR AHSIKGGA TFGF+ Sbjct: 1 MNLDLSQFFGAFFEEAEELLVDMERLLLNLDVANPSSDDLNAIFRCAHSIKGGAATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH+ E++LD AR G +QL ++++ FLETKD+++ QLDAY+Q D A+ +Y+ Sbjct: 61 HMTELTHVAESILDRARTGTLQLRENMVDAFLETKDVLKSQLDAYRQEHPIDTATLEYMV 120 Query: 121 QALRQLALEA----------------KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL 164 L L E E +A VV ++ + + I L Sbjct: 121 AKLNSLTAEDGAPVAAAPAVAAPVAAAPEPVAAPQPAPVVVEAPAAEVVGDIEGGLDIKL 180 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 + + +L+ EL HL T+ + + +L DDI AV CF+I+ADQI Sbjct: 181 INVSNEDCELIVTELKHLGTVLRHARTGRNSDIVLQSTCTADDIIAVSCFIIDADQIVIT 240 Query: 225 T-----------------------------VEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 + + + + AA P ++ Sbjct: 241 PHVGGAAPAAEAAAPVVAAPTPAAAQTEVHAPAANEAAPAQAVAAAAVPVPVRPAAADQK 300 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 TSIRV VEKVDQLINLVGELVITQ+MLAQ + DPV + L + QL RNAR Sbjct: 301 PTVAAETSIRVGVEKVDQLINLVGELVITQAMLAQTAQAFDPVLNERLFAGLSQLTRNAR 360 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 DLQE+ MSIRMMPM+YVF+R+PRLVRDLA KLGKQVEL+ G STELDK LIERIIDPLT Sbjct: 361 DLQEAAMSIRMMPMDYVFNRFPRLVRDLAHKLGKQVELSTFGKSTELDKGLIERIIDPLT 420 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HLVRNSLDHGIELPE R+AAGK++ G L+LSA HQGGNI IEV+DDG GLNR++IL KA Sbjct: 421 HLVRNSLDHGIELPEARVAAGKDATGQLLLSAAHQGGNIVIEVSDDGQGLNRDKILKKAR 480 Query: 436 SQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQ 495 +GL VS+NM+DDE+ LIFAPGFSTA+QVTDVSGRGVGMDVVK+NIQ MGG+VEIQS++ Sbjct: 481 ERGLPVSDNMTDDEINQLIFAPGFSTADQVTDVSGRGVGMDVVKQNIQSMGGYVEIQSQK 540 Query: 496 GTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVR 555 G GTTIRI+LPLTLAILDGMSV+ DEVFILPL+ V ESLQPR D+ + GG R+L+VR Sbjct: 541 GKGTTIRIVLPLTLAILDGMSVKTGDEVFILPLSCVAESLQPRPEDIKAVPGGGRLLKVR 600 Query: 556 GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR 615 EYL +V +++ F + + + ++GIVVIL S G++ AL VD+L+GQ QVVVKNLE+NYR Sbjct: 601 NEYLTLVPMYERFRITPSLPDPSEGIVVILDSEGKKIALQVDELVGQQQVVVKNLETNYR 660 Query: 616 KVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 +VPGIS ATILGDGSVALIVDVSAL R N Sbjct: 661 RVPGISGATILGDGSVALIVDVSALMRETRSGHSENA 697 >UniRef50_Q2RKH9 CheA signal transduction histidine kinases n=2 Tax=Moorella group RepID=Q2RKH9_MOOTA Length = 685 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 223/686 (32%), Positives = 352/686 (51%), Gaps = 33/686 (4%) Query: 1 MSM-DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS D+S + F DEA+E L +++ ++ L+ D E LN IFRAAH++KG + + GF Sbjct: 1 MSDLDMSQYLGIFLDEAEEQLQQLDEAVVQLEQTPDDQELLNTIFRAAHTLKGSSASMGF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + L TH ME++LD R+G++ ++ +II++ L + D ++ D+ + + + + Sbjct: 61 NRLATLTHRMESVLDSLRQGKLAVSREIIDILLASVDTLRALKDSIAAGKGEEGDVNEVV 120 Query: 120 CQALRQLALEAKGETPSAVTRLS---------VVAKSEPQDEQSRSQSPRRIILSRLKAG 170 + LA A AV V+ +E + ++ + ++K+ Sbjct: 121 ARLEAVLAGPAAPVANKAVANAELTLDDIEQNVIRAAEVKGFRAYEIRVQLEAGCQMKSA 180 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEADQI 221 L+ L L + V L A D + V+ V E + Sbjct: 181 RAYLVFNNLKELGEIIKSVPHTQDLEAEKFDDTFTLAFVSREDADTLANVVKSVSEIKDV 240 Query: 222 TFETVEVSPKISTPPVL-----KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + + K E A + + ++RV V++++ L+N Sbjct: 241 LVRPIVLEEDQPAAARAGTAPGKPGVEAAGGKNGTTAPAGEHHVNQTVRVDVQRLENLMN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMG-----QLQRNARDLQESVMSIRMMPMEY 331 LVGELVI ++ L + + L + + + R DLQE +M RM P++ Sbjct: 301 LVGELVIDRTRLTEVGNGLKNRLGNEELLETLEEVSLHIGRITSDLQEEIMKARMFPIDQ 360 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 VF+R+PR+VRDLA K GK+++ + G TELD+++IE I DPL HL+RN++DHGIE PE Sbjct: 361 VFNRFPRMVRDLARKAGKEIDFIIEGRETELDRTVIEEIGDPLIHLLRNAIDHGIEEPEV 420 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDD 448 RL GK G + L A HQ I I V DDGAG++ E+I AKA ++GL E +S Sbjct: 421 RLRQGKPRHGTVRLKAFHQENQIVITVEDDGAGMDAEKIKAKAIARGLISPESAARLSRR 480 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 E LIF PG ST+++VTDVSGRGVGMD+V+ +I+K+ G ++I++ G GT I LPLT Sbjct: 481 EALDLIFLPGLSTSDKVTDVSGRGVGMDIVRNHIEKINGTIDIRTTPGKGTCFTIKLPLT 540 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAI + V V V+ PL V+E + + + + V+ LP++ L + Sbjct: 541 LAINRSLLVHVDGRVYAFPLANVVEIIDVTPDSIQHVHRQQVVVVRG-RVLPLIYLGQAL 599 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 + A VVI+ ++ +VD LIG+ ++V+K+L + K+PGI+ ATI+GD Sbjct: 600 GLGTPIPAADTYAVVIVGLAEKQVGFIVDDLIGEQEIVIKSLGNFIGKIPGIAGATIMGD 659 Query: 629 GSVALIVDVSALQAINREQRMANTAA 654 GSVALI+DV +L E+ A+ Sbjct: 660 GSVALILDVRSLMNFVGEEADRELAS 685 >UniRef50_C9QB66 Chemotaxis protein CheA n=7 Tax=Vibrio RepID=C9QB66_9VIBR Length = 727 Score = 634 bits (1635), Expect = e-180, Method: Composition-based stats. Identities = 269/720 (37%), Positives = 393/720 (54%), Gaps = 71/720 (9%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+ + F E E L +E LL L P D E LN IFRAAHSIKGGAGTF Sbjct: 1 MALDMEQLRKIFHVECRENLETLEGELLQLDPAQVDIEVLNTIFRAAHSIKGGAGTFNLH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E LD R + QL I+ L++ D+++ LD+ +Q + D + + Sbjct: 61 EISEFTHAVETYLDLIRTQKKQLTPQGIDTLLKSCDVIRNMLDSREQQTDIDNVLKEQVS 120 Query: 121 QALRQLALEA-----KGETPSAVTRLSVVAKSEPQDEQSR------------SQSPRRII 163 L+ L + + S + V + P E R P RI+ Sbjct: 121 AELQTLLADTSTVKVAIPSESVSACAAEVPQMTPAIEGWRIRFIPHQTLFYSGNDPLRIL 180 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQI 221 + G +E L L ++ S + L G+ +E +I + +V + + Sbjct: 181 REVRELGSQYQIEVHQQMLPELAEMDPELCYLSWNIDLTGNASESEIRELFDWVADECDL 240 Query: 222 T-----------------------------------------------FETVEVSPKIST 234 E+ ++ P ST Sbjct: 241 EMTPLSGLATNQAESYEMGGETENLSLPSMPIAAEEHAQSTVLNDSAAHESSQMLPTAST 300 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 + + +SIRV +EKVD LINLVGELVITQSML + ++ Sbjct: 301 EVNSLPNPAAPSKKEAANKPAKMDSSVSSIRVDIEKVDNLINLVGELVITQSMLTELGND 360 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 L + QL +N++DLQE+V++IRM+PM + FSR+PRLVRDL G+LGK+V+L Sbjct: 361 FSMDKLDKLKAGLAQLLQNSKDLQENVLNIRMLPMSFAFSRFPRLVRDLCGRLGKKVDLQ 420 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELDK+++ERI+DPL HLVRN +DHG+E+P+ RLA GK G + L A HQGG+I Sbjct: 421 IQGEQTELDKTVLERIVDPLVHLVRNGIDHGVEMPDVRLAKGKPETGVITLQAFHQGGSI 480 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVS----ENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 +E+ DDGAG++ +++ KA +G+ +++D ++ LIFAPGFSTAEQV+D+SG Sbjct: 481 IVEIRDDGAGIDCDKLWRKAVEKGVLEPHTQRSDLTDKQIINLIFAPGFSTAEQVSDISG 540 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVKRNI+++GG +E++S+ G G+ I LPLTLAILDG V+VAD+V+++PL Sbjct: 541 RGVGMDVVKRNIEELGGQIEVESELGRGSRFTISLPLTLAILDGQLVKVADQVYVIPLLT 600 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 ++ES+Q A + AGG + +R E +PI+ L + + + ++ ++S G Sbjct: 601 IVESIQINIASVKHAAGGIELYRLREENIPILRLQDELAMGRS-GGLEKRLLCFVESAGH 659 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 R LLVD L+ Q QVV+K+LESNY KV GIS ATILGDGSV+LI+D+ L A ++ + Sbjct: 660 RVGLLVDDLLDQQQVVIKSLESNYAKVAGISGATILGDGSVSLILDIPGLIAHFMKRTTS 719 >UniRef50_Q2SPQ9 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SPQ9_HAHCH Length = 695 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 269/694 (38%), Positives = 395/694 (56%), Gaps = 40/694 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD+S F+ FF+E+ E + +E LL + +APD E +N IFRAAHSIKGG+ TFGFS Sbjct: 1 MSMDLSRFHDVFFEESFEAVNTIEASLLEVDLDAPDPESINIIFRAAHSIKGGSATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH+MENLLDE R G+ +L I+++ LE+ D M+ L + K S+ F Sbjct: 61 QVAAYTHVMENLLDEVRAGKRRLTQPIVDVLLESVDAMRLLLSSAKASENIPEEEFTQHK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQ-------------------DEQSRSQSPRR 161 L ++ + T S A + + R P R Sbjct: 121 SKLEAISQDQASLTTSNAAFTDSGAAPAAESFDADDGVSGWRVVFTPHKEMMQRGNDPLR 180 Query: 162 IILSRLKAGEVDLLEE-ELGHLTTLTDVVK--GADSLSAILPGDIAEDDITAVLCFVIEA 218 + E D E +L L + L + + I +V + Sbjct: 181 LAREVAALAEGDAEIECDLSALPDWEHFEPLNSYLGWTVRLRRPVDKAQIDDAFAWVEDE 240 Query: 219 DQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN-------------ESTSIR 265 + + + + ++ AE + + + + + ES SIR Sbjct: 241 CDMAIVPIPKAQSAPSQQAMETLAEPSAPVDEQAQASDKGASPAAKQNKPAMVAESQSIR 300 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 V +EKVD LIN+VGELVITQSML S + L+ + QL+R R LQE VM IR Sbjct: 301 VDLEKVDALINMVGELVITQSMLNMLSEDEALQGMEKLLQGLTQLKRQTRALQEGVMQIR 360 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 M+P+ + F+R+PR+VRDL+ +LGK +EL L G +TE+DK++IE+I DPL HLVRNS+DHG Sbjct: 361 MLPISFCFNRFPRMVRDLSRQLGKDIELMLSGENTEVDKTVIEKITDPLVHLVRNSVDHG 420 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN- 444 IE P R A GK G++ L A HQ GNI IEV DDG GL+ + +L+KA +GL + Sbjct: 421 IESPADRTAKGKPEHGSVYLRAYHQVGNIVIEVEDDGKGLDPQVLLSKAKRKGLIAGDAI 480 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 +S+ ++ LIF PGFST E+ +D+SGRGVGMDVVKRN+Q +GG ++++S+ T I Sbjct: 481 LSEAQIFELIFLPGFSTKEEASDLSGRGVGMDVVKRNVQSLGGSIQVESELNRRTRFTIR 540 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LPLTLAI+DG + + +E++++PL ++ESLQP + ++ +AG +++RG YLP++ L Sbjct: 541 LPLTLAIMDGQLISLGEELYVIPLVTIIESLQPDPSMINRVAGTHETIKLRGAYLPVLRL 600 Query: 565 WKVFNVAGAK----TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 + + A + T GI+VI++ RR+ L VD+L+ Q Q+V+K+LE NYR +PG+ Sbjct: 601 SEALDAAQNESKKSKPLTDGIIVIVEHESRRFGLFVDELLSQQQIVIKSLEENYRMIPGV 660 Query: 621 SAATILGDGSVALIVDVSALQAINREQRMANTAA 654 SAATILGDG VALI+DVS L + ++ ++ A Sbjct: 661 SAATILGDGRVALILDVSGLSQLQKDSEVSYADA 694 >UniRef50_A6W0H5 CheA signal transduction histidine kinase n=4 Tax=Gammaproteobacteria RepID=A6W0H5_MARMS Length = 671 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 270/666 (40%), Positives = 390/666 (58%), Gaps = 26/666 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++S + + FF+EA E L ME LL ++PD E+LN++FRAAHSIKGG+ FGF Sbjct: 1 MDNLSQYNEVFFEEAQEHLETMETLLLAYNIDSPDMEELNSVFRAAHSIKGGSDIFGFKA 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L TH+MEN+LD AR E+ L TD+I + LET D+++ L Y++ E D + Sbjct: 61 LTGLTHVMENMLDSARNNELTLTTDLITVLLETTDVLKNILSCYREEAEIDWDIIEASKA 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVA-----------------------KSEPQDEQSRSQS 158 L E G + L + + D + Sbjct: 121 RLSATLQEVTGSNNQVHSPLDEEEDLGYGFFDDDDADTEEEQGFGFFEEDENDSEKDQGF 180 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 + + E D + + + + + L+ E A Sbjct: 181 GFFDEDDKEQEQEQDQDSKAIDEESLGYGFFEENNELAKEAESLTTEPQPDANTEHTENI 240 Query: 219 DQ--ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 E T L + + + E+TSIRV K+D+L+N Sbjct: 241 GYGFFNEEFNSPQKDAVTAQPAGLTSSTVAKPTPSSKASETKAEATSIRVETNKIDKLVN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 LVGELVITQSML SE+ + +++ +L+RN R++QE+VMS+RM+P+ +VF+R+ Sbjct: 301 LVGELVITQSMLNLIGSEVPESIADKMQSALIELERNTREIQEAVMSVRMLPISFVFNRF 360 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PRLVRDL+ KL K++ L + G +TE+DK+L+E+I DPL HL+RNS+DHGIELP KRL A Sbjct: 361 PRLVRDLSTKLEKKINLVIEGGNTEIDKNLVEKISDPLLHLIRNSVDHGIELPAKRLEAN 420 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFA 456 K+ G ++LSA +GG I I +TDDGAGLNRERI+AKA +G+++ E +SD V LIF Sbjct: 421 KSETGIVMLSAAQKGGEIVITITDDGAGLNRERIIAKAVEKGISLPEPLSDSAVWQLIFE 480 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 GFSTA +VTDVSGRGVGMDVV+RNI+ +GG ++I S G GT I LPLTLAILDGM+ Sbjct: 481 AGFSTAAEVTDVSGRGVGMDVVRRNIESLGGRIDISSTAGMGTVFTINLPLTLAILDGMT 540 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V +D+VFI+PL ++ES+QP + + G+++L VR EY P++++ K + +T Sbjct: 541 VEASDQVFIIPLVNIVESIQPVAEQIKHIK-GKKLLWVRDEYWPLIDIGKTLGGSPNETN 599 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 GIVV++++ +R+ L++D L+GQ QVV+KNLE +YR+V GI+ ATI+GDGSVALI+D Sbjct: 600 METGIVVLVETSKQRFGLIIDSLLGQQQVVIKNLERHYRRVEGIAGATIMGDGSVALILD 659 Query: 637 VSALQA 642 V ++ Sbjct: 660 VDSITQ 665 >UniRef50_A6Q2K9 Chemotaxis sensor histidine kinase CheA n=2 Tax=Bacteria RepID=A6Q2K9_NITSB Length = 673 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 220/667 (32%), Positives = 365/667 (54%), Gaps = 25/667 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S D+ + F EA+E++ +++Q L+ L+ + + + LN IFR H++KGGAG G Sbjct: 6 SEDMQEILDEFVQEAEEIIENLDQELIELESDPTNRDLLNEIFRGMHTLKGGAGFLGLES 65 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQE-PDAASFDYIC 120 + E H++E++ D+ R EM L +D++++ LE D+++ ++ K E PD + Sbjct: 66 IIELAHVIESIFDKLRNNEMTLTSDMMDVILEGIDVLKSAIETLKSENEIPDVDEIKPLL 125 Query: 121 QALRQLALEAK---GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 L + + + + ++S V + EP + + S + I + +VD + Sbjct: 126 DKLNHILENPESFQADKSARSEQISEVTEQEPSEAEQESSNNNSIKEEIIFHDDVDEKIQ 185 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE---------ADQITFETVEV 228 +L + + D L + P + D I + + E +I V+ Sbjct: 186 QLIREHPGKNFKEILDDLILLPPEERDMDLIMKLDELINEGKDVEDLIKERRIIEPEVKE 245 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 +S+ K + + + E+ +IR+ +E+V L+NLVGELV+ ++ + Sbjct: 246 ESSVSSKQEEKAPVTVPEKSKTVPKPKQKKEETETIRIDIERVSTLMNLVGELVLDRNRI 305 Query: 289 AQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 + +S L D +L ++ + R+ DLQE VM +RM P++ +FS++PR+VRDL Sbjct: 306 VKLTSRLRSNCEDSEAIEELNEAIAGMSRSVSDLQEVVMKLRMQPVKRIFSKFPRIVRDL 365 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A K+GK++EL L G TE+D+S++ ++ DPL HLVRNS+DHGIE PE+RLA GK G++ Sbjct: 366 AKKMGKKIELILEGEDTEIDRSILNQLEDPLIHLVRNSIDHGIETPEERLAKGKPETGHI 425 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFS 460 ILSA +G I + + DDG G+N E++ KA +GL E MSD E LIF PGFS Sbjct: 426 ILSALQEGDRIIVSIEDDGRGINAEKVKQKAIEKGLITPEQAAQMSDKEAYELIFMPGFS 485 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 T ++V+++SGRGVGMDVV I + G +EI+S+ GT I + LPLT+AI+ + V Sbjct: 486 TVDEVSEISGRGVGMDVVSNVIHSLRGAIEIESEPDKGTKITMKLPLTVAIIRTLMVGTN 545 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 + +F +PL +V+E ++ D+ + G + L +R E L ++F++ E Sbjct: 546 NRIFAIPLFSVVEIIKYNPEDIKDV-GTYKSLVLRDEVYLFFHLNELFDLESNHKEK--- 601 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++IL G + A+ VD L G+ ++V+K L + V GI+ ATI GDG V LI+D+ +L Sbjct: 602 FIIILNIGEKNIAIAVDDLFGEEEIVIKPLGEMLKDVQGIAGATITGDGKVVLILDIKSL 661 Query: 641 QAINREQ 647 R + Sbjct: 662 INDKRNE 668 >UniRef50_B1KM54 CheA signal transduction histidine kinase n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KM54_SHEWM Length = 677 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 270/677 (39%), Positives = 394/677 (58%), Gaps = 23/677 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+S F Q FF+E+ E LA ME LL L+ PD E +N IFRAAHSIKGG+ TFGF+ Sbjct: 1 MEIDLSQFSQVFFEESLEGLASMESELLKLEVNEPDDESINTIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + THL+E LLDE R G Q+ TD ++ L + D+++ +DA + + + Sbjct: 61 QVADYTHLLETLLDEIRDGRRQMTTDHQDMLLLSVDLLRNMIDALMRKVDFADPLLAQLE 120 Query: 121 QALRQLALEAKGET------------PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK 168 + E+ S+ + + +P + R + ++ + L+ Sbjct: 121 TRFTAALAQNSSESEEEQSVTESSSGESSPQNTTWIIDFQPGIDILRCGNDPSLMFNELR 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAILP--GDIAEDDITAVLCFVIEADQITFETV 226 + L +D+ A L+ L D + I V +V + I + Sbjct: 181 LLGELEVTLVDSTLPDFSDMDPEACYLNWQLALVTDKPLEQIKEVFEWVEDECTINYHQE 240 Query: 227 EVSPKISTPPVLKLAAEQAPTGRVE------REKTTRSNESTSIRVAVEKVDQLINLVGE 280 +P A + E ++ E SIRV++EK+D LIN+VGE Sbjct: 241 TDAPVKEQAEEAGTPANTEASPSTEVIAKPKAVTPAKTPEGGSIRVSIEKIDLLINMVGE 300 Query: 281 LVITQSMLAQRSSE--LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPR 338 LVITQ+ML Q + +D + + + QL + RDLQESVM IRM+P+ + F+R+PR Sbjct: 301 LVITQAMLGQIGQQDTIDEESLLSMKQGLEQLASHTRDLQESVMQIRMLPISFAFNRFPR 360 Query: 339 LVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKN 398 LVRD+ +LGKQVEL L G TELDK+++E+I+DP+ HLVRNSLDHG+E PE R++ GK Sbjct: 361 LVRDIGQQLGKQVELILKGEDTELDKTVMEKIVDPMVHLVRNSLDHGLETPEVRVSKGKP 420 Query: 399 SVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAP 457 G++ L+A HQGGNI IE+ DDGAGL+ + I KA +GL E +S+D + LIF Sbjct: 421 EQGSITLNAFHQGGNIIIEIIDDGAGLDTQLIHKKAIDKGLVTEDEELSEDAIHQLIFKA 480 Query: 458 GFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSV 517 GFSTAE V+D+SGRGVGMDVV+RNI ++ G +E++S + G+ I LPLTLAILDG V Sbjct: 481 GFSTAEAVSDLSGRGVGMDVVRRNIHELNGTIELKSTKDKGSRFTIRLPLTLAILDGQLV 540 Query: 518 RVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 RV +++PL ++ ESLQ E ++ ++ ++ +R EYLP+V++++ F E Sbjct: 541 RVGQHTYVVPLVSIHESLQVEEQRINRISENHELVRLREEYLPVVKVFQEFGHDADFQEI 600 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 G+V+++ S + LLVD+L+ Q QVV+K+LE NY KVPG+S ATILGDG+VALI+D+ Sbjct: 601 RDGLVMVVDSNNEKIGLLVDELLSQQQVVIKSLEDNYSKVPGVSGATILGDGTVALIIDI 660 Query: 638 SALQAINREQRMANTAA 654 S L + M AA Sbjct: 661 SGLVTLAGIANMKEHAA 677 >UniRef50_D0FQ58 Chemotaxis protein n=3 Tax=Enterobacteriaceae RepID=D0FQ58_ERWPY Length = 656 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 392/655 (59%), Positives = 477/655 (72%), Gaps = 13/655 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++DF Q FF EA+ELL+DMEQHLL+L PD EQLNAIFRAAHS+KGGAGTFGFSVL Sbjct: 1 MDLNDFSQVFFSEAEELLSDMEQHLLLLDIARPDIEQLNAIFRAAHSLKGGAGTFGFSVL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 QETTHL+ENLLD+AR GE+QL+ D++NLFLE KDIMQ QL+AY+ QEPD SF YIC A Sbjct: 61 QETTHLLENLLDKARCGEIQLSRDMVNLFLEGKDIMQAQLEAYQSLQEPDEESFRYICAA 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L+Q+AL KGE V V + +S + LS +K E LL +EL +L Sbjct: 121 LQQIALSEKGELSQPV----VQPATPSVTHAPKSDGRLTVTLSGIKPQEQPLLLDELANL 176 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA- 241 T+ + L + D+I AVLCFV++ QI P + A Sbjct: 177 GTVISQRPVGSGIEVELETSVLGDEIGAVLCFVLDETQIDIRPSAAVSAPIEPDAVAPAQ 236 Query: 242 -------AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 AE + E K T ES SIRVAVEKVD +IN VGEL+ITQS+ +Q + + Sbjct: 237 IPAVSAAAEVIVNAKPEMAKRTTGTESGSIRVAVEKVDMIINQVGELIITQSIFSQLTEQ 296 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LDP +G L++S+ QL+RNAR+LQ+SVMSIRMMPM+YVFSR+PRLV DL +L K VELT Sbjct: 297 LDPAKYGMLLSSVAQLERNARELQQSVMSIRMMPMDYVFSRFPRLVHDLGARLNKDVELT 356 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 L+G + ELDKSLIERIIDPLTHLVRNSLDHGIE ++RL GK++ GNL LSAEH GGNI Sbjct: 357 LLGGAAELDKSLIERIIDPLTHLVRNSLDHGIEEKDERLRKGKSATGNLTLSAEHHGGNI 416 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 IEV DDGAGLNRE++LAKA S+G ++++ SDDEV MLIFA GFSTA VTDVSGRGVG Sbjct: 417 VIEVRDDGAGLNREKLLAKARSRGTQIADSASDDEVWMLIFAAGFSTATNVTDVSGRGVG 476 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV+RNI MGGHVE+ S + GTTIRILLPLTLAILDGMSV+V DE+++LPLN VMES Sbjct: 477 MDVVRRNILAMGGHVEVCSVKDQGTTIRILLPLTLAILDGMSVKVGDEIYVLPLNVVMES 536 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 L+P L+ G R+++VRGEYLP+ EL + F+V+G + + GI+VI+QSGG RYAL Sbjct: 537 LKPSADMLYQFVGQSRLVQVRGEYLPLTELRQAFDVSG-EAASEDGIIVIVQSGGCRYAL 595 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 VDQL+GQHQVVVKNLE NYRKVPGISAATILGDGSVALI+DV L +++ + Sbjct: 596 WVDQLVGQHQVVVKNLEHNYRKVPGISAATILGDGSVALILDVIELASLSHQSDR 650 >UniRef50_C4Z5I4 Two-component system, chemotaxis family, sensor kinase CheA n=11 Tax=Firmicutes RepID=C4Z5I4_EUBE2 Length = 711 Score = 625 bits (1613), Expect = e-177, Method: Composition-based stats. Identities = 212/706 (30%), Positives = 357/706 (50%), Gaps = 68/706 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + + F DE++E L ++ +++L+ E +++ +N IFRAAHS+KG AGT G+ + Sbjct: 7 MDVSQYLEIFIDESNEHLQNLSDGIMILEKEPDNSDTINEIFRAAHSLKGMAGTMGYKRM 66 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TH MEN+ E R G +++++ ++++ + D +++ ++ +++ + + I +A Sbjct: 67 QNLTHDMENVFSEVRNGNIKVDSRMVDVLFQCLDALEQYVNNIQETSDEGTDDNEPIIKA 126 Query: 123 LRQL--ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L E KG P + V A+ + ++ + + A E Sbjct: 127 LNSFIVNNEDKGILPEEAKKEDVPAEEKKEENVEAGDGSYAKYNNMVFADFEKNAVNEAL 186 Query: 181 H-----------------------------------------LTTLTDVVKGADSLSAIL 199 + K S ++ Sbjct: 187 EKKMNVFVIKVSVDENCILKAARAFLVFKNLEGHCDIIKSEPSAQDIEDEKFELDFSIVV 246 Query: 200 PGDIAEDDITAVLCFVIEADQITFETVEVSPK-------------------ISTPPVLKL 240 + + + I ++ V E E + S Sbjct: 247 VTEESYESIIGIIKNVSEIKDAAGEAITTPFAEDDEKEEVKEEPKHEENKNQSETKPAAA 306 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML--AQRSSELDPV 298 +A + S ++RV +EK+D L+NLV EL+I ++ L A + + Sbjct: 307 SATAKKQTPAANNNKSGKTVSHTVRVDIEKLDVLMNLVSELIIAKNGLVSASVTEDGTTS 366 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + + L+R +L ESVM +RMMP+E VF++YPR++RDL KLGK++EL + G Sbjct: 367 VNQKFGEQIEYLERVTTNLHESVMKVRMMPIESVFAKYPRMIRDLNKKLGKKMELYMSGE 426 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELD+++I+ I DP+ HL+RNS DHG+E E R GK VG++ L A +G N+ IEV Sbjct: 427 ETELDRTVIDEIGDPIMHLLRNSADHGLESAEVRAERGKPEVGSIWLDAYQEGNNVVIEV 486 Query: 419 TDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 DDG G++ E++ KA +G E +++ E L+F P FST+++VTDVSGRGVG+ Sbjct: 487 RDDGNGIDVEKVKQKAVEKGNLTQEQADVLTEKEAIDLLFKPSFSTSDKVTDVSGRGVGL 546 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVVK I+ +GG VE+++ G G+T I LPLTLAI+ + V+V +E + + L ++ Sbjct: 547 DVVKSKIEALGGDVEVKTTYGEGSTFSIRLPLTLAIIQALMVKVGEEKYAIALGSIETIE 606 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALL 595 +++ + + V+ +RG +P++ L ++ +V G E+ ++VI++ G + L+ Sbjct: 607 DVPVSEIKYVH-AKEVINLRGNVIPLIRLRELLDVPGEPEESDNIVIVIVRKGDKLAGLV 665 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VD LIGQ ++V+K+L IS ATILGDGSVALI+D + L Sbjct: 666 VDNLIGQMEIVIKSLGKYININRMISGATILGDGSVALIIDANTLV 711 >UniRef50_B9M712 CheA signal transduction histidine kinase n=6 Tax=Proteobacteria RepID=B9M712_GEOSF Length = 696 Score = 624 bits (1610), Expect = e-177, Method: Composition-based stats. Identities = 317/674 (47%), Positives = 423/674 (62%), Gaps = 34/674 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S+D++ F QTFF+E E LA++E+ LL L PD E+LNA+FR+AH+IKG AG FGF Sbjct: 4 SIDMARFCQTFFEECSEHLAEIERILLSLDLNRPDEEELNALFRSAHTIKGSAGIFGFED 63 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + THL+E+LLD R EM L +++LFL+ KD + QL ++ + D + +C Sbjct: 64 MTSVTHLLESLLDRIRGHEMLLTASMVDLFLKAKDAIALQLAGHRDGERVDLQFIEEVCC 123 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR--LKAGEVDLLEEEL 179 +LR L + +PS L V + + R + ++ +D L +EL Sbjct: 124 SLRHLTEQDALPSPSTKGDLPAVQAQTEDGKMQSTFELRFSPDTDLFMRGARLDYLFDEL 183 Query: 180 GHLTTLT--------------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 G L LT D L G + +I V FV + DQ+ Sbjct: 184 GELGELTAQAIIADAPPVEQLDPEHCHTRWQLWLAGTCNDMEIRDVFEFVADDDQLNIRR 243 Query: 226 VE--------VSPKISTPPVLKLAAEQAPTGRVEREKTTRS---------NESTSIRVAV 268 V+ P+ T + AAE P GR +K + +SIRV V Sbjct: 244 VQSAEIGNDRPEPQPVTASGSQTAAETQPFGRRAYDKDETAPGAFGRRGGEAESSIRVGV 303 Query: 269 EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 KVDQLIN VGELVITQ+ML Q +LDPV +L + QL+RN RDLQ+SVMSIR++P Sbjct: 304 AKVDQLINQVGELVITQAMLDQMGRQLDPVLFQNLHQGLLQLERNTRDLQQSVMSIRLVP 363 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 + VF+R+PRLVR+LA KLGKQVEL +VG +TELDK L+E+I DPLTHLVRN+LDH +E+ Sbjct: 364 ISIVFNRFPRLVRELAAKLGKQVELKMVGETTELDKGLVEKIADPLTHLVRNALDHALEV 423 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDD 448 PE R+AAGK G++IL A GG I I+V DDGAGLNRE+IL KA +G+ ++ MSD+ Sbjct: 424 PELRIAAGKGPTGSVILQASQVGGRIVIDVIDDGAGLNREKILTKAVERGIATADTMSDE 483 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 EV LIFAPGFSTAE VTD+SGRGVGMDVV +N+Q +GG V IQS+QG GT + I LPLT Sbjct: 484 EVWQLIFAPGFSTAEAVTDISGRGVGMDVVLKNVQSLGGRVAIQSEQGKGTRVTISLPLT 543 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAILDG+SV V +E I+P+NA++ESLQP +L + G V++VRGEY+PI+ L ++F Sbjct: 544 LAILDGLSVGVGNERLIVPINAIVESLQPTGENLKAI-NGNEVVQVRGEYIPILRLHRIF 602 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 N+ A T+ GI++I++ G + A+LVD L + QVV+K++E NYRKV G S A ILGD Sbjct: 603 NLTDAVTDPRHGILMIIEVEGEKGAMLVDNLQDELQVVIKSMEENYRKVEGTSGAAILGD 662 Query: 629 GSVALIVDVSALQA 642 G VALI+DV AL Sbjct: 663 GRVALILDVGALMQ 676 >UniRef50_Q0AYL2 Putative CheA signal transduction histidine kinases n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AYL2_SYNWW Length = 677 Score = 623 bits (1607), Expect = e-177, Method: Composition-based stats. Identities = 208/681 (30%), Positives = 350/681 (51%), Gaps = 44/681 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M MD+S + F +E+ E L + Q LL + + D LN IFRAAH++KG + T GF Sbjct: 1 MKMDMSQYLDVFLEESKEHLESLNQKLLDWEKNSGDIAALNEIFRAAHTLKGMSSTMGFE 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD--Y 118 L + TH MEN+L + + G +++ ++++ + D +Q ++ + + + + + Sbjct: 61 DLADLTHHMENILSDLKEGLLEVTPQVVDILFQCFDRLQLIIERIESNGSGEMDNSELIM 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I ++++ + L Q + S + ++ ++ Sbjct: 121 ILESIKGGGFQTTAPAADNGQDLKPEEILTTQHSNTTSFDFNQYDMTVMREAASRNFASI 180 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L + + + + +I + ++ F I+ + Sbjct: 181 YIRLFVDPGCLMKSVRAFMVFKVLEEDSEIIKSFPPASDIEEGKFSEEIELLVITASSIK 240 Query: 239 KLAAEQAPTGRV----------------------------------EREKTTRSNESTSI 264 +L + E ++ ++ Sbjct: 241 ELEGRLNAISEIKVREIKEINFASLASGSQQETNGDQISSSQDVLKESKEQKGHKVKQTV 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV +E++D L+NLVGELV+ + L Q + +L ++ Q+ R + DLQ VM + Sbjct: 301 RVDIERLDILMNLVGELVMHKGRLEQIGA---SSKIDELNETIEQIDRISGDLQSVVMKV 357 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+E VF+R+PR+VRDLA +L K+V+ + G TELD+++I+ I DPL HL+RN++DH Sbjct: 358 RMVPVEQVFNRFPRMVRDLAKELNKEVDFLIEGKETELDRTVIDEIGDPLVHLLRNAVDH 417 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV--- 441 G+E P++RL GK +IL A H+G N+ IEV DDGAG+N +R L KA +G+ Sbjct: 418 GVESPQERLKRGKPQKATVILRARHEGNNVYIEVEDDGAGINIKRTLEKAVEKGIISAKE 477 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 +E +S +E + ++F+PGFST E +TDVSGRGVG+DVVK I+ + G + + S+ G GT Sbjct: 478 AEVISPEEASQILFSPGFSTTENITDVSGRGVGLDVVKTKIESLSGEIFVDSRPGQGTRF 537 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 RI LPLTLAI+ + + V DE++ +PL +V E+ + D+ + + V+ +RG LP+ Sbjct: 538 RIKLPLTLAIIQALMISVHDEIYAIPLGSVDETTMIKNEDIKMVQN-QEVIVLRGNVLPL 596 Query: 562 VELWKVFNVAG-AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 L + + G A + VVI++ G R+ L+VD LIGQ ++V+K+L +PGI Sbjct: 597 FRLASLLEIPGEAAANEEEMYVVIVRKGERQIGLVVDTLIGQQEIVIKSLGKILAGIPGI 656 Query: 621 SAATILGDGSVALIVDVSALQ 641 + A + GDG V LI+D++ L Sbjct: 657 AGAIVAGDGFVRLIIDIATLF 677 >UniRef50_P29072 Chemotaxis protein cheA n=36 Tax=Bacillales RepID=CHEA_BACSU Length = 672 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 223/676 (32%), Positives = 375/676 (55%), Gaps = 42/676 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + F DE+ E L + LL+L+ + D + ++ IFRAAH++KG + T G++ L Sbjct: 1 MDMNQYLDVFIDESKEHLQTCNEKLLLLEKDPTDLQLVHDIFRAAHTLKGMSATMGYTDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 THL+EN+LD R G+M++ +D +++ E D ++ + + + + Sbjct: 61 AHLTHLLENVLDAIRNGDMEVTSDWLDILFEALDHLETMVQSIIDGGD-GKRDISEVSAK 119 Query: 123 LR-------QLALEAKGETPSAVTRLS-------VVAKSEPQDEQSRSQSPRRIILSRLK 168 L A E S+ + V+ ++E Q + LK Sbjct: 120 LDVNGAHAESAASAEPAEAQSSASDWEYDEFERTVIQEAEEQGFKRYEIKISLNENCMLK 179 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEAD 219 A V ++ E+L + + + A+ L + +DI ++ V E + Sbjct: 180 AVRVYMVFEKLNEVGEVAKTIPSAEVLETEDFGTDFQVCFLTHQSAEDIEQLINGVSEIE 239 Query: 220 QITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE-----------STSIRVAV 268 + P K A ++EK + + S +IRV + Sbjct: 240 HVEVIQGAPLTSAEKPEESKQEDSPAAAVPAKQEKQKQPAKNDEQAKHSAGGSKTIRVNI 299 Query: 269 EKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 +++D L+NL ELVI + L Q + EL+ H +L ++ ++ R + DLQ ++++RM+P Sbjct: 300 DRLDSLMNLFEELVIDRGRLEQIAKELE---HNELTETVERMTRISGDLQSIILNMRMVP 356 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 +E VF+R+PR++R L +L K++EL+++G+ TELD+++I+ I DPL HL+RNS+DHGIE Sbjct: 357 VETVFNRFPRMIRQLQKELNKKIELSIIGAETELDRTVIDEIGDPLVHLIRNSIDHGIEA 416 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENM 445 PE RL GK G ++L A H G ++ IEV DDGAGLNR++IL KA +G+ +E + Sbjct: 417 PETRLQKGKPESGKVVLKAYHSGNHVFIEVEDDGAGLNRKKILEKALERGVITEKEAETL 476 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 D+++ LIFAPGFSTA+Q++D+SGRGVG+DVVK ++ +GG V ++S +G G+ I L Sbjct: 477 EDNQIYELIFAPGFSTADQISDISGRGVGLDVVKNKLESLGGSVSVKSAEGQGSLFSIQL 536 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTL+I+ + +++ +E F +P+++++E+ D+ E V++ RG +P+V L Sbjct: 537 PLTLSIISVLLIKLEEETFAIPISSIIETAVIDRKDILQTHDRE-VIDFRGHIVPVVYLK 595 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 + F + + +A Q +++++ G + A +VD IGQ +VV+K+L V IS ATI Sbjct: 596 EEFKIEDTRKDAEQLHIIVVKKGDKPTAFVVDSFIGQQEVVLKSLGDYLTNVFAISGATI 655 Query: 626 LGDGSVALIVDVSALQ 641 LGDG VALI+D +AL Sbjct: 656 LGDGEVALIIDCNALI 671 >UniRef50_A6F9B4 Chemotaxis protein histidine kinase n=1 Tax=Moritella sp. PE36 RepID=A6F9B4_9GAMM Length = 682 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 256/682 (37%), Positives = 383/682 (56%), Gaps = 28/682 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M +D+ F+Q F +E E L ME LL L P + D+E +N IFR AHSIKGGAGTFGF Sbjct: 1 MDIDLKQFHQVFIEECLEGLEVMEAELLKLNPGSVDSEVINTIFRVAHSIKGGAGTFGFH 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+ E LLD+ R ++ L INLFL+T D ++ + E + + + Sbjct: 61 QLTAFTHVAETLLDDLRAEKLTLIDGHINLFLQTVDCLRAWIQLLADDSESIPDAAESLK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKS---------------EPQDEQSRSQSPRRIILS 165 Q Q + S+ + QD + PR I Sbjct: 121 QQYNQFLQLDVNQDLSSTGDEPLAKPPVMKGLDDGDWLIHFVPGQDILKQGNEPRLIFAE 180 Query: 166 RLKAGEVDLLEE-ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 GE+ ++ + + + L ++E I +V + I Sbjct: 181 LQDMGELKVMPKFDNIPSWNNLSPEDIYVTWDLELISQVSEAQIKEAFEWVEDESTIIIT 240 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREK-----TTRSNESTSIRVAVEKVDQLINLVG 279 T + L + + T+S E+ SIRV+++KVD LIN+VG Sbjct: 241 TPSTRTQSIASETLATDNKMLAESKPSPVTTNKITKTKSPETNSIRVSIDKVDALINMVG 300 Query: 280 ELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 ELVITQ+ML + + +L + QL ++ R++Q+SVM IRM+P+++ F+R PR+ Sbjct: 301 ELVITQAMLEELGQDFSVEKLPELKKGLTQLSQHTREMQDSVMKIRMLPIQFAFNRIPRM 360 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VRDL+ +LGK V L + G TELDK ++E++ DP+ HLVRN+LDHGIE E+R AGK+ Sbjct: 361 VRDLSAQLGKNVVLRIHGEETELDKIMLEKLSDPIVHLVRNALDHGIETIEERKLAGKSD 420 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPG 458 V L ++A HQGG I +E+ DDG GLNR++I AKA +G+ + SD+++ IF+PG Sbjct: 421 VAYLDINAFHQGGEIIVEIRDDGRGLNRDKIHAKAIEKGIANKDQRYSDNQIDEFIFSPG 480 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FST E V+D+SGRGVGMDVVKRNI+ +GG ++I+S G G+ I LPLTL+I+DG V+ Sbjct: 481 FSTVETVSDISGRGVGMDVVKRNIESLGGDIKIESTTGEGSCFSIRLPLTLSIMDGQLVK 540 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 + + +ILP+ +++ESLQ ++ + LA V ++R E++ I+ L+KV N T Sbjct: 541 IGSKTYILPIMSIIESLQLKDGMVTKLADDTEVFKLRDEFISIIRLYKVLNHKTNLKCIT 600 Query: 579 QGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 G++V+++ G ++Y LLVD L Q QVV+KNLE N+ KV +S ATILG+G+VALI+D++ Sbjct: 601 DGLLVVVECGNQKYGLLVDDLAAQQQVVIKNLEENFMKVSCVSGATILGNGTVALILDIA 660 Query: 639 ALQ------AINREQRMANTAA 654 + ++ A+ AA Sbjct: 661 DIVKRVTNERHQQQGPRAHVAA 682 >UniRef50_Q07SD9 CheA signal transduction histidine kinases n=1 Tax=Rhodopseudomonas palustris BisA53 RepID=Q07SD9_RHOP5 Length = 713 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 273/688 (39%), Positives = 392/688 (56%), Gaps = 37/688 (5%) Query: 1 MSMD-----ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 MS D ++ F +T+F+E ELL ++ +L +L D E L+A+FR+ HSIKGGAG Sbjct: 3 MSEDSESYPLAQFRKTYFEECAELLDALQSNLDLLSNGGGDGETLHAVFRSVHSIKGGAG 62 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 FGF+ L +H+ E+LLD R ++ ++I L L D + + + A + Q A Sbjct: 63 AFGFASLVAFSHVFESLLDAVRDNKIATEPEVIQLLLRASDALGDIVSAARADQPIAADF 122 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 I A+ + + A +A R E Q R + + L Sbjct: 123 GCEIVAAMEDMLVGASEPMQAAPERKPAATAEEMQVSGERRYRIEFRPHREMFQKGNEPL 182 Query: 176 EEELGHLT----------------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEAD 219 D S L + + V FV + Sbjct: 183 LLLRQLRRLGGLAVDVDASRLPPLASIDPEGAYLSWVLTLDTGAPQTAVHEVFEFVEDDC 242 Query: 220 QITFETVE--------------VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIR 265 ++ VE I+ P++ A + +T + SIR Sbjct: 243 ELKITPVEGAAADAAPAAAAALEPAAIAAAPLVLAPVVAATPAKPADPQTAPPAVTQSIR 302 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 V V+KVD+L+NLVGELVITQ+ML ++ S L ++ LI + L ++AR+LQESVM+IR Sbjct: 303 VDVDKVDRLVNLVGELVITQAMLTEQGSLLPNDHYPTLIQGIEALAQSARELQESVMAIR 362 Query: 326 MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHG 385 P++ VF+R PR+VRDLA LGK+V + G TE+DK++IE++ DPLTH++RN+LDHG Sbjct: 363 AQPVKSVFARMPRVVRDLAATLGKEVRIVTSGEMTEIDKTVIEQLNDPLTHMIRNALDHG 422 Query: 386 IELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-EN 444 IE PE R+AAGK G + LSA H+ G I IEV DDG GLNRE++LAKA +GL + Sbjct: 423 IEAPEARVAAGKPRQGTIHLSAAHRSGRIVIEVADDGRGLNREKVLAKAQERGLVPPGAS 482 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 +SD+E+ LIF P FSTA+ V+++SGRGVGMDVVKRN+Q +GG + +QS+ G G+ + Sbjct: 483 LSDEEIDGLIFLPAFSTADVVSNISGRGVGMDVVKRNVQSLGGRITVQSRPGAGSRFTLS 542 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LPLTLA++DGM V V E FI+PL A++ESL+P+ AD+HPL G +L +RGEYLP++ L Sbjct: 543 LPLTLAVVDGMVVSVGRETFIIPLTAIIESLRPQPADIHPLVGRGELLALRGEYLPLIHL 602 Query: 565 WKVFNVAGAKTEATQGIVVILQSGG-RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAA 623 + F +AGA + +GIV+++QS ++VD+L+GQ QVVVK+LE+NY V GIS A Sbjct: 603 HRCFAIAGAVADPCRGIVIVVQSETAGCVGVVVDELLGQQQVVVKSLEANYDPVDGISGA 662 Query: 624 TILGDGSVALIVDVSALQAINREQRMAN 651 TILG+G VALI+D++ L + A Sbjct: 663 TILGNGKVALILDIARLPETHGHGDAAR 690 >UniRef50_C1DCD8 CheA n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD8_LARHH Length = 670 Score = 619 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 316/683 (46%), Positives = 414/683 (60%), Gaps = 49/683 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D+S F+ FFDEA E L +E+ LL QP D E LNAIFRAAHSIKG AGTFGF Sbjct: 1 MSIDLSQFHAAFFDEAAEHLETIERLLLESQPGQTTDGEALNAIFRAAHSIKGSAGTFGF 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + + TH +ENLLD RRGE+ L I++ L+++D++ +QL A++ Sbjct: 61 ADIAGFTHGLENLLDRIRRGELPLTAGRISVCLKSRDVIADQLAAHRDGATAVDPGRLAE 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 +A A + + P VT SR ++ + G + L++ L Sbjct: 121 IEAALLAAHDEGTDMPVPVTS-------------SRPDGGHYLLCWDRQLGHPEGLQDRL 167 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS---------- 229 L T+ + + L L ++ DI L F + Q E +E Sbjct: 168 AALGTVQPCGEQGEELVFQLQSGLSATDIAESLAFWLPPGQFRLEHLESQGDEAFGVFVD 227 Query: 230 -------------------------PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 P +T V AE A TG + TSI Sbjct: 228 TQRVVATSATEPAAPVDEGWGLFAPPAAATADVSPPVAEPAATGSTPALRQATPQPETSI 287 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV VEKVDQL+N +GELVITQSMLAQ+ L + +L M QL+R R+LQE+VMS+ Sbjct: 288 RVNVEKVDQLLNRIGELVITQSMLAQQVERLGTLASEELQRGMAQLERTTRELQEAVMSV 347 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF R+PRLVR+L KLGK VEL ++G TE+DKS +E++ DPLTHLVRNSLDH Sbjct: 348 RMLPVASVFGRFPRLVRELGQKLGKAVELQVIGEQTEIDKSFVEKLTDPLTHLVRNSLDH 407 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 G+E E R AGK VG L L A HQGG+I IEV+DDGAGL R+RILAKA QGL VS+ Sbjct: 408 GLESAEGRAGAGKPPVGRLTLRAFHQGGHIVIEVSDDGAGLQRDRILAKAREQGLNVSDT 467 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 M+D EV LIF PGFSTA+ VTDVSGRGVGMDVV+RNI+ MGG + I+S G GTTI + Sbjct: 468 MNDAEVWQLIFEPGFSTAQAVTDVSGRGVGMDVVRRNIEAMGGSIRIESLAGVGTTISLH 527 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LPLTLAILDGMS+ + +E++ILPL+ V+ESLQPR D+ LAG R+L VRGE LP++ L Sbjct: 528 LPLTLAILDGMSIAIGNEIYILPLSQVVESLQPRAEDVFTLAGQHRLLRVRGECLPLLAL 587 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 W++F++ EA +G+V+I+ +R ALLVD L+ Q Q VVKNLE+NYR+V G++AAT Sbjct: 588 WEIFDIQPRVREAHEGLVIIITVASQRVALLVDDLVSQQQFVVKNLETNYRRVRGLAAAT 647 Query: 625 ILGDGSVALIVDVSALQAINREQ 647 ILGDG VA I+D + + + + Sbjct: 648 ILGDGQVAFILDGAEVVRMGQGG 670 >UniRef50_D0IYI5 CheA signal transduction histidine kinase n=4 Tax=Comamonadaceae RepID=D0IYI5_COMTE Length = 734 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 315/719 (43%), Positives = 415/719 (57%), Gaps = 76/719 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGFS + Sbjct: 15 FDLSQFYQIFFEEASENLDQMEQMLLSLDLSAANDEELNGIFRCAHSIKGGAATFGFSDV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E + S + Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQSGDEGEPVSTAELVVR 134 Query: 123 LRQLAL----------EAKGETPSAV------------------------TRLSVVAKSE 148 + LA A P V+ + Sbjct: 135 IEALAQGLTEIPQVNRSAAAAEPVQPVAVVAAVVADTPAQAPAPAAAQVAEPGPVIGTAP 194 Query: 149 PQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDI 208 P+ + + + L +L + G T V AD + +D++ Sbjct: 195 PEGARELTIEIGPLSRLELGDAIKELFRDIPGLGTIQDQVGTKADHRLFKVRTVSTDDEL 254 Query: 209 TAVLCFVIEADQITFE-----------------------TVEVSPKISTPPVLKLAAEQA 245 + F + +Q+ + A Sbjct: 255 RDLFVFHVSKEQVQISDAAQPQNATEPVVEPLEVVVDEEAAMPPHNLPAEEAYGFFAGAP 314 Query: 246 PTGRVEREKTTR-------------------SNESTSIRVAVEKVDQLINLVGELVITQS 286 + ++ + ESTSIRV V+KVDQLINLVGELVITQ+ Sbjct: 315 GSPEAQQNQEHAVIGGAGSTVQKAAPKAAAAHMESTSIRVDVKKVDQLINLVGELVITQA 374 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 MLAQ S LDP + L+ + L RN RDLQESVMSIRM+PM VFSR+PR++RDLAGK Sbjct: 375 MLAQNSQGLDPTTYQQLLAGLADLDRNTRDLQESVMSIRMIPMSTVFSRFPRMLRDLAGK 434 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 LGK+++L +G +TELDK L+E+I DPLTHLVRNS+DHGIE+PE R+AAGK+ G L L+ Sbjct: 435 LGKKIDLVTLGEATELDKGLVEKITDPLTHLVRNSVDHGIEMPEDRIAAGKSEHGTLTLA 494 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVT 466 A HQGG+I IEV DDG G+NRERIL KA +G+ VS++M D +V LIFAPGFSTA+ VT Sbjct: 495 ASHQGGSIVIEVRDDGKGMNRERILNKARERGMDVSDSMPDSDVWQLIFAPGFSTADVVT 554 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 DVSGRGVGMDVVKRNI +GG VEI+S G G + + LPLTLAI+DGMSV V +EV+IL Sbjct: 555 DVSGRGVGMDVVKRNITSLGGTVEIESVAGVGMKVAVRLPLTLAIMDGMSVGVGEEVYIL 614 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL++V+ES Q + D++ +A G ++++VR EY+P++ L + F V A T I+V+++ Sbjct: 615 PLSSVVESFQVKADDVNTVANGTQLVKVRDEYMPVIALERTFQVPRADESQTSNIMVVVE 674 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + G R ALLVD+L+GQHQVVVKNLESNYRKVP +S ATILGDGSVALI+D AL R Sbjct: 675 AEGSRVALLVDELLGQHQVVVKNLESNYRKVPNVSGATILGDGSVALILDTGALVRRTR 733 >UniRef50_A5G3I8 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G3I8_GEOUR Length = 707 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 296/699 (42%), Positives = 408/699 (58%), Gaps = 57/699 (8%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+S F Q FF+E+ E L +ME+ LL L P++P + L+AIFRAAHSIKG AG FGF+ + Sbjct: 8 DLSRFNQVFFEESAEHLTEMERILLELDPDSPQEDDLHAIFRAAHSIKGSAGIFGFTDMM 67 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH +E+LLD R E+ L+ +I+ FLE D + QL ++ D + +C+ L Sbjct: 68 IVTHDLESLLDRVRNHELTLSRTMIDAFLEAGDAIAMQLAGHRDGSAVDLPIIEEVCKKL 127 Query: 124 RQ------------------LALEAKGETPSAVTR-----LSVVAKSEPQDEQSRSQSPR 160 + + + PS V EP ++ + Sbjct: 128 EAFISGTSDAAVDAGSGLNLFSTLSDADAPSGVAAHSNSIAGYEIDFEPAEDTFKRGVRL 187 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEA 218 + L + + + L+++ IL E+++ + FV E Sbjct: 188 ENLFYELADLGELQVSAAIDFASPLSELDPENCYTRWHLILETAAGENELRDIFEFVAEE 247 Query: 219 DQITFETVE-------------------------------VSPKISTPPVLKLAAEQAPT 247 +++ + ++ P + Sbjct: 248 NELKIRVISETGTAKVSDSTAEPGQEHRGNGVMAVAEAGVPMNTQASVPGRRAYDRNETD 307 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 + S E +SIRV V KVDQLIN VGELVITQSM++Q SELDPV ++ + Sbjct: 308 AGAYGRRAGESAEGSSIRVGVAKVDQLINQVGELVITQSMMSQIVSELDPVLFENIHRGL 367 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 QL+RN RD+QES+MSIR++P+ VFSR+PRLVRDL+ KLGK VEL G +TELDK LI Sbjct: 368 MQLERNTRDMQESIMSIRLVPISLVFSRFPRLVRDLSAKLGKLVELKTFGETTELDKGLI 427 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 E+I DPLTHLVRN LDH IELP R A GK++ G + + A GG I I+V DDGAGLNR Sbjct: 428 EKIADPLTHLVRNCLDHAIELPHVRKAGGKDATGTITMRAAQVGGRIVIDVADDGAGLNR 487 Query: 428 ERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 ++IL KA +GL V E M D+EV LIFAPGFSTA+ VTD+SGRGVGMDVV++N+ MGG Sbjct: 488 DKILKKALERGLDVDETMPDEEVWHLIFAPGFSTADTVTDISGRGVGMDVVQKNVHAMGG 547 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 +++ S+QG G I LPLTLAILDG+SV V E FI+PLN+++ESLQP D+ ++G Sbjct: 548 RIQVASEQGKGCKFTISLPLTLAILDGLSVAVGKEKFIIPLNSIVESLQPLADDIKMISG 607 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 V+ VRGEYLP++ L++VFN+ T+ +GI+V++ + G R AL+VD+LIG+HQVV+ Sbjct: 608 RR-VVHVRGEYLPLLPLYEVFNLETPITKPEEGILVLIDAEGERGALMVDELIGEHQVVI 666 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 K+LE+NYRKV G + ATILGDG VALI+DV L + + Sbjct: 667 KSLENNYRKVEGTAGATILGDGRVALILDVGGLLQVGKN 705 >UniRef50_A6TRN2 CheA signal transduction histidine kinase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TRN2_ALKMQ Length = 685 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 206/687 (29%), Positives = 344/687 (50%), Gaps = 54/687 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ + + F +E+ E L +M +LL L+ D LN IFR AH++KG + T G+ + Sbjct: 1 MDMNQYLEIFIEESKENLQNMNTNLLSLENSLEDMNLLNEIFRIAHTLKGMSATMGYKHI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH MEN+L R EM + +++L E D +++ ++ + S S + Sbjct: 61 AQLTHEMENVLHSIRSNEMSMTAKVVDLLFECFDRLEKYINEVELSGSEGTDSPKILIDK 120 Query: 123 LRQLALEAKGETPSAVTRLS-------------------VVAKSEPQDEQSRSQSPRRII 163 L + T V + + S Sbjct: 121 FHLLTVGGPEVTIQVQQSEEPMGSDTLNGTIKLKDHTRKAVHLAMKEGITPYSIKVILDE 180 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVKGAD---------SLSAILPGDIAEDDITAVLCF 214 LK+ ++ L ++ + + S ++ + ++I L Sbjct: 181 NCMLKSARAYIIINALDGVSEIIQSEPSIEDIEDEKFDLSFELVVLSKVPVEEIERELNE 240 Query: 215 VIEADQITF-------------------ETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 + + + + E + I + K Sbjct: 241 ISDIEFFSVIDLKNQLEDNLHEDQIVNYEDGKNKETIEEMKAQQAVTVTEAGTEKNEVKE 300 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 RS ++RV ++++D L+NLV EL+I ++ L D ++ + L+R Sbjct: 301 KRSKTGKTVRVDIDRLDNLMNLVSELIIIKTRLEDIG---DDGKRQNMNEATEHLERITT 357 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 L ++VM +RM+P+E VF+R+PR+VRDL+ LGK++ L L G TE+D+++I+ I DPL Sbjct: 358 SLHDAVMKVRMVPIERVFNRFPRMVRDLSKDLGKEISLVLSGEETEVDRTVIDEIGDPLI 417 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RNS+DHGIE PE R+ GK+ G + L A G ++ IE+TDDG G+N ++ KA Sbjct: 418 HLIRNSIDHGIEDPEYRMDIGKSKSGTVKLIAYPDGNSVVIEITDDGQGVNILKVKEKAV 477 Query: 436 SQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +GL +E M D E L+F GFSTA++V+DVSGRGVG+DVVK I+ +GG +E+ Sbjct: 478 ERGLVNAEQADLMDDKEAVELLFTAGFSTADKVSDVSGRGVGLDVVKTKIESLGGAIEVD 537 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S++G G+ I LPLTLAI+ + V V +E + +PL+++ E ++ + + E ++ Sbjct: 538 SQKGKGSKFIIRLPLTLAIIQALLVIVGNEKYAIPLSSIKEITTISQSHIRKVQNNE-II 596 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R E LPI+ L + + A E + VVI++ G + L+V++LIGQ ++V+K+L Sbjct: 597 LYRNETLPILRLSNLLGASNADIEEDEATVVIVKKGDKTVGLVVNELIGQQEIVIKSLGK 656 Query: 613 NYRKVPGISAATILGDGSVALIVDVSA 639 V G++ ATILG+G+VALI+D ++ Sbjct: 657 FLGNVQGVAGATILGNGTVALIIDTNS 683 >UniRef50_Q56310 Chemotaxis protein cheA n=9 Tax=Thermotogaceae RepID=CHEA_THEMA Length = 671 Score = 616 bits (1589), Expect = e-175, Method: Composition-based stats. Identities = 217/675 (32%), Positives = 353/675 (52%), Gaps = 43/675 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + ++ F DE E L ++ LL L+ D E +N FRA H++KG AGT GFS + + Sbjct: 2 MEEYLGVFVDETKEYLQNLNDTLLELEKNPEDMELINEAFRALHTLKGMAGTMGFSSMAK 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD-AASFDYICQAL 123 H +EN+LD+AR E+++ +D+++ D++ +D D + D + Sbjct: 62 LCHTLENILDKARNSEIKITSDLLDKIFAGVDMITRMVDKIVSEGSDDIGENIDVFSDTI 121 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQS----------------------------- 154 + A K + + E + E + Sbjct: 122 KSFASSGKEKPSEIKNETETKGEEEHKGESTSNEEVVVLPEEVAHVLQEARNKGFKTFYI 181 Query: 155 -----RSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDIT 209 + + + +L E + + ++ ++ + L D Sbjct: 182 KVILKEGTQLKSARIYLVFHKLEELKCEVVRTIPSVEEIEEEKFENEVELFVISPVDLEK 241 Query: 210 AVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 AD EV+ K ++ T + E + + S ++RV +E Sbjct: 242 LSEALSSIADIERVIIKEVTAVTEESGAEKRTEKEEKTEKTEEKAERKKVISQTVRVDIE 301 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 K+D L++L+GELVI +S + + L N +L S+ L R DLQ VM IRM+P+ Sbjct: 302 KLDNLMDLMGELVIARSRILE---TLKKYNIKELDESLSHLSRITLDLQNVVMKIRMVPI 358 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 +VF+R+PR+VRDLA K+ K+V + G TELD++ +E I +PL HL+RN++DHGIE Sbjct: 359 SFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAIDHGIEPK 418 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMS 446 E+R+A GK +G LILSA H+G N+ IEV DDG G+++E+I+ KA +GL + +S Sbjct: 419 EERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLS 478 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 D E+ +F PGFST E+V++VSGRGVGMDVVK ++ + G + I+S++ GT + I LP Sbjct: 479 DQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRLP 538 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 LTLAI+ + V+V + V+ +P+ + L + D+ + + V+ +RGE +P+ LW+ Sbjct: 539 LTLAIIQALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRD-VIVIRGEVIPVYRLWE 597 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATIL 626 V + K E + VI++ G R+Y ++VD L+GQ +V+K+L + +V S A IL Sbjct: 598 VLQI-EHKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFSGAAIL 656 Query: 627 GDGSVALIVDVSALQ 641 GDGS+ALI++VS + Sbjct: 657 GDGSIALIINVSGIV 671 >UniRef50_A1K5G3 Chemotaxis protein cheA n=1 Tax=Azoarcus sp. BH72 RepID=A1K5G3_AZOSB Length = 696 Score = 615 bits (1586), Expect = e-174, Method: Composition-based stats. Identities = 293/695 (42%), Positives = 399/695 (57%), Gaps = 46/695 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+S FYQ FF+EA E LA +E LL + PD E++ IFRAAHSIKG A TFGF Sbjct: 1 MAFDMSQFYQIFFEEAAEHLATIETVLLSIDAARPDPEKVAEIFRAAHSIKGSAATFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH ME+LLD+ RRG L ++ L D + L A++ D A+ + Sbjct: 61 DLTGLTHEMESLLDDVRRGRRPLTQAMVQACLAAGDALHGLLAAHRGEGVADRAAAEAAR 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEP------------------------------- 149 Q L QL + + V + Sbjct: 121 QRLLQLKDAPDHDAAVTDPPAAAVPDATEWPLYRVRFVVARFLAGSDLLFGSMLEDLAAL 180 Query: 150 ---QDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAED 206 + + +P + VD L L V A+ ++A + Sbjct: 181 GDYELLEPDPAAPGTRCIRICSGESVDALRAAFERLAEPGSVEITAEQMAAANAAPALPE 240 Query: 207 DITAVLCFVIEAD------------QITFETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 + + + ET+ +P + P ++A + Sbjct: 241 PQPPAVAAAGDEALFDVADDGSYGFFVPLETLPAAPFGTDDPPAAAVPDEADAQPAATAR 300 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNA 314 + +SIRV VE+VD++++LVGELVITQSML ++ + P L+ + LQR+ Sbjct: 301 ELPRSADSSIRVGVERVDRMMDLVGELVITQSMLLDAAAAIGPAAGERLLAGLALLQRHT 360 Query: 315 RDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL 374 RDLQ+SVM+IRM+P+ VFSR+PRLV DL +L KQ++L L G TELDK L+E++ DPL Sbjct: 361 RDLQQSVMAIRMVPVSMVFSRFPRLVHDLGMRLDKQIDLVLEGEHTELDKGLVEKLADPL 420 Query: 375 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 THLVRN +DHGIE E+R AAGK G L L+A H GG++ IEV DDGAGL+RER++A+A Sbjct: 421 THLVRNCIDHGIEPAERRRAAGKPEAGRLRLAASHLGGHVLIEVEDDGAGLDRERLIARA 480 Query: 435 ASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +QGL SE+MSD+E LIF PGFSTAEQVTD+SGRGVGMDVV+RNI +GG V+I S+ Sbjct: 481 RAQGLPCSEDMSDEEAWQLIFLPGFSTAEQVTDLSGRGVGMDVVRRNIAALGGRVDIVSR 540 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G GT + +PLTLAIL+GM V V DEVFILPL+A++ESLQP A + + G R++ V Sbjct: 541 AGRGTRFSVSVPLTLAILEGMQVAVGDEVFILPLDAIVESLQPERASVRSIGGAPRLIAV 600 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 RGEY P+VEL F V A + T+GI+V+++ G R AL VD L+GQ QVV+K LE+++ Sbjct: 601 RGEYWPVVELGHFFAVPEAGRDWTRGIMVLVERNGSRAALFVDGLVGQQQVVIKPLETHF 660 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 R+VPG+S+AT+LGDG VALI+DV+AL R+ Sbjct: 661 RRVPGVSSATLLGDGRVALILDVAALIGTARDSAA 695 >UniRef50_A3EPP7 Putative signal transduction histidine kinase (CheA) n=2 Tax=Leptospirillum sp. Group II RepID=A3EPP7_9BACT Length = 649 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 209/658 (31%), Positives = 340/658 (51%), Gaps = 38/658 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + Q F EA+E+L ++ + + L+ D LN IFR AHSIKG AG G + + Sbjct: 9 EMKEILQDFLTEAEEMLEGLDTYFVQLESRPDDRTLLNEIFRTAHSIKGSAGFIGLNRIV 68 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E H EN+L++ R+G+M+ +I++ LE D ++ + + D D + Q L Sbjct: 69 EVAHHAENVLNQLRQGQMRAEPLVIDIILEAMDALKLLVREVRTGTPAD-VDIDALSQKL 127 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 L + + ++ + Sbjct: 128 DLLMQWGEDVQSESAQEQQEQEGEGAREHPEETVGKTAP--------------------- 166 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + L + + + + EA+ + V + L + Sbjct: 167 ------ETPVPSETTLLPEAFQVEDEELAAGQTEAETGAGKPVPAREPVPPSRSLSPKVD 220 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH--- 300 P E +IRV ++D ++NLVGELV+ ++ L + S + + Sbjct: 221 SPPPSASEGPSAGAGESDQTIRVETSRLDNVMNLVGELVLGRNRLVRLSGDQSGLQDVQQ 280 Query: 301 --GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 ++ ++ QL R DLQ +V+ RM P+ V ++PR+VRDL+ K+GK+V L L G Sbjct: 281 QLKEISEAVAQLSRVTTDLQLAVIKTRMQPIRKVLGKFPRMVRDLSRKMGKEVRLELSGE 340 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELDKS+IE I DPL H++RN++DHG+E PE+R A+GK + G + + A +G +I IEV Sbjct: 341 ETELDKSVIEEIGDPLVHIIRNAIDHGLESPEERQASGKPAEGVVRIGAYQEGNSIVIEV 400 Query: 419 TDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 +DDG G+N ER+ KA + L ++ MS+ E+ LIF PGFSTAE++TDVSGRGVGM Sbjct: 401 SDDGKGINVERVKQKAIERRLISGADADRMSEGELVNLIFLPGFSTAEKITDVSGRGVGM 460 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVV+ NI K+ G VE+++ G G+T I LPLT+AI+ + V + EV+ +PL V+E++ Sbjct: 461 DVVRTNINKINGSVEVRTTPGAGSTFIIRLPLTIAIIQALMVTIGAEVYAIPLQTVVETV 520 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT-EATQGIVVILQSGGRRYAL 594 + ++ L+ G VL +R + LP++ L F V + ++ VV++Q G R L Sbjct: 521 KITREEVKTLS-GSDVLNLRDQVLPLLRLRDEFKVPDTDPADPSRCYVVVVQLGSRLLGL 579 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 +VD+L Q +VV+K++ + G++ ATI GDG V LI+DV+ + + ++ + Sbjct: 580 VVDRLPYQEEVVIKSMGPLLSGIRGMAGATITGDGKVVLILDVAEILQDIQLRQQSGA 637 >UniRef50_D2RE79 CheA signal transduction histidine kinase n=2 Tax=Archaeoglobus RepID=D2RE79_ARCPR Length = 626 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 226/644 (35%), Positives = 362/644 (56%), Gaps = 21/644 (3%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S++ Q F E E + M Q+ + ++ D E LN IFR AH+IKG AG G+ L Sbjct: 1 MDLSEYKQEFLQEVKEYIDVMNQNFIKVEK--GDLEALNEIFRVAHTIKGMAGFMGYKKL 58 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + H +E+ + + R G + + D+I++ L+ D ++E ++ + S++ D D + + Sbjct: 59 ELLCHRLESAMGKVRDGVVNVTEDLIDVMLKAVDKIEEIVEKIE-SEDNDDVDIDEVISS 117 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L + E + + +S+P D + + +K+ L+ E L + Sbjct: 118 LESIIGEVR-------SSKCEKKESKPFDNANLRVDVKLADDCVMKSVRATLILESLKDV 170 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + V D++ + + V + E ++ Sbjct: 171 CEVIGVDPDEDAMDSDDFDGTFSIYVKGDRKAVEDVMSKVGEVERFDIVEIKQQRIEKKV 230 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E+ E+ K + ++ SIRV +E++D ++NLVGELVI + L Q + + D + Sbjct: 231 EKPVV--KEQMKEEKLRKNESIRVNIEQLDTIMNLVGELVIGKGRLIQIAQDYD---IPE 285 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L ++ + + LQ+ +M IRM+ +E VFS++PR+VRDLA KLGK+VEL + G TEL Sbjct: 286 LKEAVSVMDKAITSLQDEIMRIRMVKVERVFSKFPRMVRDLARKLGKKVELIIEGQDTEL 345 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPL H++RN++DHGIE PE+R AGK+ VG ++LSA + N+ IE+ DDG Sbjct: 346 DRTVLDEITDPLIHIIRNAVDHGIETPEERKKAGKSEVGKIVLSARREKNNVVIEIEDDG 405 Query: 423 AGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ E++ KA +GL E+MS+DE+ MLIFAPGFST ++ T+VSGRGVGMDVVK Sbjct: 406 RGIDVEKVKKKAIEKGLITPAEAESMSEDEIKMLIFAPGFSTKDKATEVSGRGVGMDVVK 465 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 ++K+GG+V+I S++G GT I I LP T+AI + +RV +E F +PL++V+E++ E Sbjct: 466 TRVEKLGGNVKIYSEKGKGTKIVITLPPTVAITKALLIRVGNEDFAIPLSSVVEAIYVTE 525 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + + + G L VR +P L ++FN+ K E G +I++ G R AL+ D + Sbjct: 526 EN-YKVLHGTPFLYVRNNLIPAFRLRELFNIKNGKAEREVG--IIVEREGDRIALIADAI 582 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 Q ++V+K L S KV G S TILGDG V I+DVS L Sbjct: 583 TDQLEIVIKPLTSFLSKVRGFSGITILGDGRVVPIIDVSTLLGR 626 >UniRef50_B0THC8 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0THC8_HELMI Length = 702 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 212/706 (30%), Positives = 347/706 (49%), Gaps = 71/706 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F +E+ E L + Q +L L+ + L+ IFR+AH++KG + T GF + Sbjct: 1 MDMSQYMDMFMEESREHLQALNQKILELEDNPQELAILDEIFRSAHTLKGMSATMGFERI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH MEN+L R ++ +NT I++L D ++ ++A + + + + Q Sbjct: 61 AELTHEMENVLSVLRGSQVNVNTAIVDLLFRCLDALESMVEAISSGEAGNRDISELVVQL 120 Query: 123 LRQLALE-AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL----------------- 164 + + A + + V + V SEP+ + + Sbjct: 121 RKAGQGQLADVDAATNVRKAGAVGVSEPKQTEEVTLPVLGGPEVLNAFEINQYDLTLLHE 180 Query: 165 ------------------SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAED 206 +K+ ++ L + + V A L + Sbjct: 181 AQRKHFSAYHIQVELAPGCVMKSARAYMVFRNLEEIGEIIKSVPSAQELEDEKFDTSFQV 240 Query: 207 DITAVLCFVIEA----------------------------DQITFETVEVSPKISTPPVL 238 I V + E Sbjct: 241 VIVTRQDEVSVRKTLDSIAEVRVKAITPLNIGDVRIQEGQETDVAAHSETEQDAVMARDP 300 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 + + PT ++ ++ S ++RV +E++D L+NLVGELVI ++ L Q S+ Sbjct: 301 SASEKARPTAGPGAQEVRKTKGSQTVRVDIERLDNLMNLVGELVINKTRLEQISTT---S 357 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 N +L ++ + R DLQ VM +RM+P+E VF+R+PR+VRDLA +LGK++ L + G Sbjct: 358 NLTELNETIEHIDRITTDLQNVVMKVRMVPIEQVFNRFPRMVRDLAKELGKEINLIVEGK 417 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELD+++I+ I DPL HL+RN++DHG+E+P+ R GK + L A+H+G N+ IEV Sbjct: 418 ETELDRTVIDEIGDPLVHLIRNAIDHGVEMPDVRRQKGKPVEAVVRLVAKHEGNNVIIEV 477 Query: 419 TDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 DDG G++ + + KA +GL +E + D LIF GFSTAE+V+DVSGRGVG+ Sbjct: 478 EDDGRGMDPQVLRTKAIQKGLLTVKEAEQLDDQGALNLIFLAGFSTAEKVSDVSGRGVGL 537 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 D V+ I+ + G VEI+++ GT +I LPLTLAI+ + V V DE++ +PL + E+ Sbjct: 538 DAVRTKIESLSGSVEIETRLNAGTKFKIRLPLTLAIIQALLVNVGDEIYAIPLGTIDETT 597 Query: 536 QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALL 595 + + + V+ +RG LP++ L KV V A + VV+++ G ++ L+ Sbjct: 598 SIIPGQIKNVQ-SQEVVLLRGNVLPLIRLDKVLEVPKAAEAPEELYVVVVRKGEKKAGLI 656 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VD LIGQ ++V+K+ + + GI+ A ILG+G V+LI+DV L Sbjct: 657 VDSLIGQQEIVIKSPGKLLQGISGIAGAAILGNGHVSLILDVGTLF 702 >UniRef50_A9KND4 CheA signal transduction histidine kinase n=4 Tax=Bacteria RepID=A9KND4_CLOPH Length = 697 Score = 609 bits (1572), Expect = e-173, Method: Composition-based stats. Identities = 220/699 (31%), Positives = 363/699 (51%), Gaps = 62/699 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + + F DE E L + + LL+L+ E + + +N IFR+AHS+KG AGT G+ + Sbjct: 1 MDVSQYLEIFIDETKEHLQSLNEQLLILEKEPENEDTINEIFRSAHSLKGMAGTMGYKRM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 Q TH MEN+ E R G+M++ +++++ + D ++ LD S + + I ++ Sbjct: 61 QRLTHDMENVFSEIRTGKMKVKAELVDVLFKGLDALESYLDRIITSADEGTEDNEDIIKS 120 Query: 123 LRQL-----------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE 171 L ++ A E+K ET +V + V+ + + + + + E Sbjct: 121 LNRILEEGVKAFAQDATESKEETHKSVVSAAEVSNLKESVQADIALADHELRAVEKMLEE 180 Query: 172 ------------------------VDLLEEELGHLTTLTDVVKGADSLSAILP------- 200 V EELG + V+ + L Sbjct: 181 GGHAYSLTIYIQESCILKAARAFLVFKALEELGDIIKSKPEVQDIEDERFDLDFSVVLLT 240 Query: 201 --------------GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 +I DI+ ++ E + T +E + + A+ A Sbjct: 241 KESMSKVEKVVSNVSEINGVDISEIIVPKSEHKEETLHELESKQEQKSLSKNSYNAKSAA 300 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR-SSELDPVNHGDLIT 305 ++E + + S+RV +EK+D L+NLV EL+I ++ L +E G Sbjct: 301 ATAKQKEA-AKPVVNRSVRVDIEKLDDLMNLVSELIIAKNGLVSMNGTETKSDAMGGFNE 359 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + L+R +L +SVM +RM+P+E V +R+PR++RDL+ KL K++EL + G TELD++ Sbjct: 360 QIEYLERITTNLHQSVMKVRMVPIESVVNRFPRMIRDLSKKLDKKMELYMTGEDTELDRT 419 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +I+ I DPL HL+RN+ DHG+E E+R++ GK +G++ L A +G N+ IEV DDG+G+ Sbjct: 420 VIDEIGDPLMHLLRNAADHGLESNEERMSLGKPEIGSIFLDAYQEGNNVVIEVRDDGSGI 479 Query: 426 NRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 N E+I KA +G E M+D E+ L+F P FSTAE ++DVSGRGVG+DVVK I Sbjct: 480 NVEKIKNKAIDKGTITEEQAAAMTDKEIIDLLFRPSFSTAEVISDVSGRGVGLDVVKTKI 539 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 + +GG++E ++ G+ I LPLTLAI+ + V + E + +PL ++ ++ Sbjct: 540 ETLGGNIETKTTLSKGSNFIIRLPLTLAIIQALMVELGTEKYAIPLGSIETIENVATKEI 599 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 + + V+ +RG +P++ L K+ +V E VVI++ G + L+VD LIGQ Sbjct: 600 KYVQ-SKEVIHLRGNVIPLIRLNKILDVTENLKETEDLTVVIVKKGDKLAGLVVDNLIGQ 658 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 ++V+K++ IS ATILGDG +ALI+DV++L Sbjct: 659 LEIVIKSIGKYINNSKMISGATILGDGEIALILDVNSLV 697 >UniRef50_B8CW48 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CW48_HALOH Length = 655 Score = 608 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 225/660 (34%), Positives = 365/660 (55%), Gaps = 29/660 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +++ Q FFDE+ E L + +++L L+ + + E +N +FRAAHS+KG A T GF L + Sbjct: 2 DNNYLQMFFDESSEYLRILNENVLALEQDPENIELINEVFRAAHSLKGMAATMGFQYLTD 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +EN+LD+ R G++ +N DII+L + D +++ ++ K E YI Sbjct: 62 LTHKIENILDKVRNGQLNINEDIIDLLFDGLDYIKQLVEDIKNEGEEATDVSAYIKDLEN 121 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI-----------ILSRLKAGEVD 173 + +E + + E ++ ++ I +L ++ + Sbjct: 122 YVDIEGVSLDEDSSPGDISFSDEEKKEIFAKMHESDNIYKVNVKLVKDCLLKNVRGFMIL 181 Query: 174 LLEEELGHLT------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 EELG+L + DS+S IL + +I L +++ D++ E + Sbjct: 182 KNAEELGYLVKSKPTKDNIEDEDFGDSISLILVSKLNSSEIKKELGNIVDVDKVEIEVIN 241 Query: 228 VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 S+ + + + + +++ T S ++RV + K+D L+N+VGEL+I ++ Sbjct: 242 NEFNESSEQQNTIKKVKPTSKKTSKKRLTSMEVSPTVRVDINKLDNLMNMVGELLINKTR 301 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 L + E + + QL R +L VM IRM+P+ +F+R+PR+VRDL+ +L Sbjct: 302 LEDLNIESEVY-----QDIIQQLDRVTMELHHIVMQIRMVPIGGIFNRFPRMVRDLSKEL 356 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 K+++L + G+ TELD+S+I+ ++DPL H++RN++DHGIE PE+R+ GK+ G ++L A Sbjct: 357 NKEIDLIIEGAETELDRSIIDELVDPLIHILRNAVDHGIESPEERVKKGKDRRGTILLQA 416 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQ 464 +G I IEV DDG G+ E + KA +GL E M D + LIF PGFST++ Sbjct: 417 YQKGSEIIIEVEDDGRGIEPEVLAEKAIEKGLVTLEEVEAMDDRDKLNLIFRPGFSTSKT 476 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 +TDVSGRGVGMDVVKR ++ + G + I+S GT I LPLTLAI + V+V +E+F Sbjct: 477 ITDVSGRGVGMDVVKRVVESLDGQIFIESDVDVGTRFTISLPLTLAITQALMVKVNEEIF 536 Query: 525 ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA---GAKTEATQGI 581 +PLNA+ E+L D+ + G+ V+ +R +PIVE K N+ G + + Sbjct: 537 AIPLNAISETLTVTPDDIRQVR-GQDVIVLRDRTIPIVECSKQLNMDVEYGLYLKREEIP 595 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 VVI+ G R+ L+VD+L+ Q ++V+K+L S IS ATI+GDG VALI+DV + Sbjct: 596 VVIINQGDRQVGLIVDELLNQQEIVIKSLGSYLVDTKNISGATIVGDGDVALILDVRNIA 655 >UniRef50_Q30QC4 CheA signal transduction histidine kinases n=9 Tax=Campylobacterales RepID=Q30QC4_SULDN Length = 803 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 213/653 (32%), Positives = 353/653 (54%), Gaps = 13/653 (1%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + + Q F E+ EL+ ++Q L+ L+ D E LN IFR AH++KG + F V Sbjct: 1 MDEFQEILQDFLVESFELIEQLDQDLVELETRPDDLELLNRIFRVAHTVKGASSFLNFDV 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L TH ME++L+ AR GE+ + I+++ LE+ D+M+ L + + Sbjct: 61 LTHLTHHMEDVLNRARHGELVILPAIMDVILESIDLMKALLHTIRDTSADSGIDVSGCVS 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 L + A KGET V + ++ Q E + + + D ++ + Sbjct: 121 RLDKCA---KGETNIEVPQTTISTPKATQSEPKEVKKEVVVETQESDELDYDNMDADELE 177 Query: 182 LTTLTDV-VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + + + ED T+ + + V P L Sbjct: 178 AEIERLLKQRQEEDKIKREQKATNEDGATSETNGTEDEYVPVAKAPAVVTPARRPSSLGD 237 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 ++ R +SN +IRV V+++D L+NL+GELV+ ++ L + + +++ Sbjct: 238 DSDSNDDARAASPAKKQSNVEQTIRVDVKRLDHLMNLIGELVLAKNRLIKINDDVEERYE 297 Query: 301 -----GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 +L + + DLQ +VM RM+P+ VF+++PR++RDL+ +L K++EL + Sbjct: 298 GESFLEELNQVVSIVSIVTTDLQIAVMKTRMLPIGKVFNKFPRMIRDLSRELNKKIELEI 357 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TELDKS++E I DPL H++RNS DHG+E+P+ RL GK+ G + L A ++G I Sbjct: 358 SGEDTELDKSIVEEIGDPLVHIIRNSCDHGVEMPKIRLEQGKSETGTIKLKAYNEGNQIV 417 Query: 416 IEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I++ DDG GL+ + + K+ +GL ++NMSD E LIF PGFSTA VT+VSGRG Sbjct: 418 IQIDDDGKGLDVDMLKRKSLERGLITEKEADNMSDKEAFALIFKPGFSTATVVTNVSGRG 477 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVVK NI+K+ G ++I S+ G GT++++ +PLTLAI+ + V V +E + +PL +V+ Sbjct: 478 VGMDVVKTNIEKVNGIIDIDSELGIGTSMKLKIPLTLAIIQALLVGVQEEHYAIPLASVL 537 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E+++ + +++ + G V+ +R + L +V + +F V + VV+L G + Sbjct: 538 ETVRISKDEVYTVEGR-SVMRLREDVLSLVHIGDIFEVERILDSSEYAYVVVLGLGASKL 596 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 L+VD L+GQ ++V+K+L + + GI+ ATI GDG V LIVDV A+ + + Sbjct: 597 GLIVDTLVGQEEIVIKSLGEFLKGIEGIAGATIRGDGGVTLIVDVVAIMDMAK 649 >UniRef50_A5EDT5 Chemotaxis protein cheA n=2 Tax=Bradyrhizobium RepID=A5EDT5_BRASB Length = 684 Score = 607 bits (1565), Expect = e-172, Method: Composition-based stats. Identities = 268/651 (41%), Positives = 391/651 (60%), Gaps = 25/651 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +T+F+E ELL ++ +L +L D E L+AIFR+ HSIKGGAG FG + L Sbjct: 13 AQFRKTYFEECAELLDALQSNLELLSSGQEDDETLHAIFRSVHSIKGGAGAFGCTDLVAF 72 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H E+LLD R ++ + DI L L D + + ++A + Q+ + I A++ Sbjct: 73 SHTFESLLDALRDHKIAVTNDIKQLLLRASDALADIVNAARLEQQLAPSFAVDIRTAMQH 132 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 + A + ++P EQ+ R KA E LL +L L L Sbjct: 133 VLQGAGPAA--EPGPAPAASDAKPLHEQTYRIRFRPHTEMLKKANEPLLLIRQLRKLGAL 190 Query: 186 T--------------DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 D + + L + I V FV + + E +E + Sbjct: 191 AIDVDCSALPALGALDPEAAYFNWTFTLETAVPRSGIQDVFEFVEDDCDLQIELLESA-- 248 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 + G + + SIRV V+KVD+L+NLVGELVI+Q+ML ++ Sbjct: 249 -----TAAVEVAPGDAGSAAAPVVAAVSLAQSIRVDVDKVDRLVNLVGELVISQAMLTEQ 303 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 L + LI + L ++AR+LQESVM+IR P++ VF+R PR+VR+LA LGK+V Sbjct: 304 GLALPADKYPQLIQGIEALAQSARELQESVMAIRAQPVKSVFARMPRIVRELAAVLGKEV 363 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 + G TE+DK++IE++ DPLTH++RN+LDHGIE P +RLAAGK G + LSA + Sbjct: 364 RIVTSGEMTEIDKTVIEQLNDPLTHMIRNALDHGIEPPAERLAAGKPRQGTINLSAAQRS 423 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 G I IEV+DDG G+NR+++LAKA ++GL + N+SDD++ LIF P FSTAE ++++SG Sbjct: 424 GRIVIEVSDDGRGINRDKVLAKARARGLVPAGANLSDDDIDNLIFLPAFSTAEVISNISG 483 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVVKRN+Q +GG + ++S+ G G++ + LPLTLA++DGM V V E FI+PL A Sbjct: 484 RGVGMDVVKRNVQALGGRISVRSRFGHGSSFTLSLPLTLAVVDGMVVSVGRETFIIPLVA 543 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG- 589 ++E+L+P AD+HP+ G VL +RGEYLP+V L +VF++ A + +GIV+I+QS Sbjct: 544 IVENLRPLPADIHPVVGRGHVLALRGEYLPLVYLHRVFSIGDAIGDPCRGIVIIVQSESA 603 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 R ++VD+L+GQ QVVVK+LE+NY V GIS ATILG+G VALI+DV+ L Sbjct: 604 GRVGIVVDELLGQQQVVVKSLEANYEPVDGISGATILGNGRVALILDVARL 654 >UniRef50_B8D0S0 CheA signal transduction histidine kinase n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0S0_HALOH Length = 699 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 238/693 (34%), Positives = 382/693 (55%), Gaps = 55/693 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D TF +EA ELL M LL L+ + D + +N IFR H++KG A G + + Sbjct: 5 DLLNTFIEEAKELLDKMVVDLLELEAKPGDMDLINNIFRGMHTLKGSASLTGLNDIANFV 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQALRQ 125 H E+LLD+ RRG + +N +INL L D++ E ++A + + I +++ Sbjct: 65 HHSEDLLDQVRRGCITVNDKVINLLLTCTDLIGEMVEALGNDDVQVKNEKVESIIWEIKK 124 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQ-------------SRSQSPRRIILSRLKAGEV 172 L + TPS L + E+ P ++ + ++ Sbjct: 125 LLKDQTEHTPSEEGSLGDNLHNFGTGERCYRIKLDFNPNLFETGTDPLMLVRELREFSDI 184 Query: 173 DLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 ++ + L ++ L+ ++ + D I V FV +++ E + + Sbjct: 185 LMVAVNYTRVPDLYNLDPELCYLTLTILIKTGVGIDRIKDVFIFVQVDNKVEIEDITENF 244 Query: 231 K---------------------ISTPPVLKLAAEQAPTGRV-----------------ER 252 + + + A Q G + ++ Sbjct: 245 SDNIDISLSDKKTGEILVERGIVEEEDITQALARQKKIGEILTEEGKVSREQVQRVVYDQ 304 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 K+ E ++I+V K++ L+N + ELVI Q+ + + + +++T++ + + Sbjct: 305 HKSRAVKEKSTIKVDTHKLESLMNSMAELVIAQAKVRELVIHRTDRSENEIMTALNSVDK 364 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 R+LQE +M +RM+P+ F R+ RLVRDL+ + GK++ L + G TELDK +IERI D Sbjct: 365 RIRNLQEDIMKVRMVPIGNTFLRFKRLVRDLSREQGKEINLEIRGKETELDKIVIERIYD 424 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H++RNS+DHGIE PE+R A GKN VG + L++ HQ GNI IEV DDG GL++E+IL Sbjct: 425 PLKHMIRNSVDHGIEPPEEREALGKNRVGTISLNSYHQEGNIIIEVADDGRGLDKEKILD 484 Query: 433 KAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 KA ++G+ + +++ + LIF PG ST+E+VT+ SGRGVGMDVV+ NI+++ G + I Sbjct: 485 KAINRGVVDEDQELTEQGIYRLIFEPGLSTSEEVTETSGRGVGMDVVRNNIEQLRGTINI 544 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 S G GT +I LPLTLAI+DGM+V+V DE FI+PLN+++E ++P + + G V Sbjct: 545 FSNPGEGTRFKIKLPLTLAIIDGMNVKVGDEQFIIPLNSIVEFIRPLPEHIKTVNGKGEV 604 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 ++VR EY+ + L+K+FN+ G+KT+ T+GI+VILQ R+ LLVD+++GQ Q VVK++E Sbjct: 605 VKVRDEYITLSRLYKLFNLKGSKTDPTEGILVILQDENRKLCLLVDEIVGQQQAVVKSME 664 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 NY + GI+ ATI+GDG VA+I+DVS + + Sbjct: 665 DNYTFIDGIAGATIMGDGRVAMILDVSTIIRMA 697 >UniRef50_B1HQY1 Chemotaxis protein n=24 Tax=Bacillales RepID=B1HQY1_LYSSC Length = 690 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 220/694 (31%), Positives = 368/694 (53%), Gaps = 58/694 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M+++ + + F +E+ E L +HLL L+ D + IFR+AH++KG + T GF L Sbjct: 1 MEVNQYLEMFIEESKEHLQACSEHLLALEKNPDDLAIVGEIFRSAHTLKGMSATMGFEDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH MEN+LD R ++ + +I+++ E+ D ++E + + + Q Sbjct: 61 ADLTHKMENVLDAIRNEKIHVTPEILDVVFESVDHLEEMVMDIANGGDGKRDVSATVAQL 120 Query: 123 LR-QLALEAKGETPSAVTRLSVV--------------AKSEPQDEQSRSQSPRRIILSRL 167 R +L EA E + V + V +S Q + S + L Sbjct: 121 KRIELGEEAVPEVVATVAEPAAVECVLEYDSFEQTVITQSAEQGFHAYEISVKLREDCLL 180 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAED-------------------DI 208 KA V ++ E L + + L ++ Sbjct: 181 KAARVFMVFEILEKDGEVIKSSPSVEKLEDEQFDQQFYVAFVTKESAEDMQKKIMKVSEV 240 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP----------------TGRVER 252 V+ I+ + + E +++ + E + Sbjct: 241 EEVIVTAIDQKKFSEREYESQQEVAATALAVAEVESTSTPDPSKPEPVAQSVKTAAPAKA 300 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 EK + +IRV +E++D L+NL ELVI + L ++E VNHG+L ++ ++ R Sbjct: 301 EKNHAPVGNKTIRVNIERLDILMNLFEELVIDRGRLQSIATE---VNHGELNETVERMSR 357 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 DLQ ++++RM+P+E VF+R+P+++R L+ L K++ L ++G+ TELD+++I+ I D Sbjct: 358 VMGDLQTIILTMRMVPVETVFNRFPKMIRQLSRDLNKKINLEIIGAETELDRTVIDEIGD 417 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RNS+DHGIE P R A GK G ++L A H G + IE+ DDGAG+NR+++LA Sbjct: 418 PLVHLIRNSVDHGIENPTSRRAKGKPEEGTVVLRAYHSGNYVFIEIEDDGAGINRDKVLA 477 Query: 433 KAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 KA S+G+ E MSD+++ LI A GFSTA+ ++DVSGRGVG+DVVK I+ +GG++ Sbjct: 478 KAISKGIVTQEQSYSMSDNQINELILASGFSTADVISDVSGRGVGLDVVKTTIESLGGNI 537 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 I+S Q G+ I LPLTL+I+ M V + E++ +PL++++E+ R +++ + Sbjct: 538 SIESTQDVGSIFSIQLPLTLSIISVMLVEIEKEIYAIPLSSIIETSIIRSSEIMNAHN-Q 596 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQHQVVVK 608 +V++ RG+ +P+V L ++F V + + + VVI++ G + L+VD IGQ ++V+K Sbjct: 597 KVIDFRGKVVPLVFLEEIFEVPRTEPQDEEFHSVVIVRKGEKLAGLVVDSFIGQQEIVLK 656 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 +L + + IS ATILG+G VALIVD +AL Sbjct: 657 SLGNYLTNIFAISGATILGNGKVALIVDCNALIK 690 >UniRef50_C0QYP7 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYP7_BRAHW Length = 720 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 229/716 (31%), Positives = 379/716 (52%), Gaps = 71/716 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D +F F EA+E++ +E L++L+ D + LN IFR+AH++K AGT GF++ Sbjct: 1 MFDSDEFISIFLSEANEIVEGLENDLVLLEDNKSDEDLLNKIFRSAHTLKSSAGTVGFTI 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS--QEPDAASFDYI 119 + E H+ ENLL++ R G++ + +I + LE D ++ L + + D + Sbjct: 61 MSELNHVAENLLEKVRSGKLDVTPQMITVLLEFLDTVKLMLQNIVDGKSETEGVTNIDSL 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR------------------------ 155 ++ +A T +A + S K E ++ Sbjct: 121 KAKIKAIADGNDVSTAAATPKASPEPKKEEPAKEEAKTEEKKEDTKTESPASSGGENSFH 180 Query: 156 ------------SQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD---SLSAILP 200 P + G + L E L T+ ++ S Sbjct: 181 IEMGFKATIFDNGIDPLMFLNDLRAIGTISNLRIECNSLPTILNLEDPYVCYTQFSLDFE 240 Query: 201 GDIAEDDITAVLCFVI---------------EADQITFETVEVSPKISTPPVLKLAAEQA 245 + E+ + + FVI + ++ + + + A + Sbjct: 241 TNAPEEQVQNIFLFVIDDNDINIINTKADIKDDEEANKPAESKKEEPAKEEAKENTAAKT 300 Query: 246 PTGRVEREKT-----------TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 E T+ +++RV K+D L+NL+GELVI QS + Q + Sbjct: 301 EEKPAETSAAASKPAAAPKAGTKVQAPSTVRVDTRKLDSLMNLIGELVIAQSRIMQLTQS 360 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 LD L ++ + R +R +QE VM+IRMMP+ +F+++ R VRDL +L K+V+L Sbjct: 361 LD--IDNGLKEAVSSMDRTSRQIQEEVMNIRMMPIGPIFTQFHRYVRDLNLELNKEVKLV 418 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGN 413 L G +TE+DK+++E++ DPL H++RNS+DHGIE E+R+A GK G + +SA HQ G+ Sbjct: 419 LKGETTEIDKNMLEQLSDPLKHIIRNSMDHGIEKTKEERIARGKPEYGTITMSAAHQEGH 478 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 + IEV+DDG GLN+E+I KA +GL + SD E+ IF+PG STAE++TD+SGRG Sbjct: 479 VVIEVSDDGNGLNKEKIFNKAVEKGLLSRDGKYSDIEIYRTIFSPGLSTAEKITDISGRG 538 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV+ N++KM G +EI+S +G G+T I LPLTLAI++G++ + +++I+PL +++ Sbjct: 539 VGMDVVRANVEKMKGKIEIKSTEGQGSTFIIKLPLTLAIIEGITFALGKQIYIMPLISII 598 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E ++ + + P G ++++R EYLP++ L KVF + GIVV++++G R+ Sbjct: 599 EQIKVKNEQVKPFEGKGEMIKIRDEYLPLIRLHKVFEIDTQVDNIDDGIVVVVEAGYRKC 658 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 A+ VD+L+ Q QVV+K+L+S + K GI+ TILGDG +ALI+D+ L ++ + + Sbjct: 659 AIFVDELLDQQQVVIKSLDSAFSKHAGIAGGTILGDGRIALIIDIQGLVNMSLQGK 714 >UniRef50_B2A371 CheA signal transduction histidine kinase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A371_NATTJ Length = 713 Score = 603 bits (1556), Expect = e-171, Method: Composition-based stats. Identities = 208/715 (29%), Positives = 366/715 (51%), Gaps = 82/715 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F DEA E L M Q+L+ L+ D L+++FR AH++KG A T G+ + Sbjct: 2 DNQYLDVFIDEAREHLQTMNQNLIDLEQSPEDRSILDSLFRVAHTLKGMAATMGYQGVAN 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS------FDY 118 TH +EN+LD R+GE ++ ++II+L LE D ++E ++ + ++ D + Sbjct: 62 YTHKLENILDSFRQGEKKITSNIIDLLLEGADALEEFVNKLSEGEQVDLDFSSMQSRLEQ 121 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQS------------------------ 154 + + E + + + +K E + + Sbjct: 122 AFAKADRDSFETPSQAQDTSSTNNEQSKGEAEMAATSEVQTDSSGEKAGSESDILDLNEY 181 Query: 155 ------------------RSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD--- 193 R ++L +A V E G + V+ + Sbjct: 182 EGNLLKSALNDDYSAYHIRVVFDENVLLKGARAFMVFQKVEARGEIIKSDPEVEEIEDEN 241 Query: 194 ---SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP----------------KIST 234 + I+ + + +I + + V E +++ + ++ + Sbjct: 242 FDQEIELIVVTKVDQQEIKSDIEQVSEINEVYLKVLQEDQLTDKTDEGADEDDDEKVQTE 301 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 ++ +Q + + + ++RV +E++D+L+NLV ELVI ++ L Q ++ Sbjct: 302 EQKVQQKDKQDEAKDSDGQSQQKIKTGKTVRVDIERLDKLMNLVSELVINKTRLEQVANN 361 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 + +L + Q R ++Q VM +RM+P++ VF+R+PR+VRDL+ L K+V L Sbjct: 362 KES---SELGKTSEQFSRITSEIQNVVMKVRMVPLDQVFNRFPRMVRDLSRSLNKEVNLV 418 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELD+SLI+ I D L HL+RN+LDHG+E E R +GK++ GN+ + A H N+ Sbjct: 419 IEGRETELDRSLIDEIGDLLMHLIRNALDHGLEDSETRHKSGKSAKGNIHIKAYHNENNV 478 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 IEV+DDG G++ E++ KA S+GL SE + D EV +F PGFST+++V++VSGR Sbjct: 479 VIEVSDDGKGIDPEKVRKKAISRGLLDSQQSEQVPDSEVINFLFTPGFSTSDEVSEVSGR 538 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVG+DVVK ++ +GG VE+ S+ GT + LPLTLAI+ + V V +E + LPL+++ Sbjct: 539 GVGLDVVKSKLENLGGRVELDSEINQGTKFTMYLPLTLAIIQALMVNVGNEQYALPLSSI 598 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT-----EATQGIVVILQ 586 E+ + D+ + + V+ +R + +P+++L + +V + + +I++ Sbjct: 599 EETTILTDQDIQKVQE-QEVIRLRDQLVPLIDLHDILDVERTENGEQEHAEQERFAIIVR 657 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 G ++ L+VD+L+GQ +VV+K+L + G + ATILGDG VALI+DV++L Sbjct: 658 KGDKKAGLIVDELLGQQEVVIKSLGGFLADIKGFTGATILGDGKVALILDVNSLL 712 >UniRef50_B7IHS6 Chemotaxis protein CheA n=2 Tax=Thermotogaceae RepID=B7IHS6_THEAB Length = 680 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 221/686 (32%), Positives = 348/686 (50%), Gaps = 52/686 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M ++ F DE E + + LL L+ D E +N FRA H++KG AGT GF + Sbjct: 1 MSYEEYLSVFIDEVREYVQQLNDALLDLEKNPEDMEYINVAFRALHTLKGMAGTMGFENM 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQ 121 + H MEN LD R G++ +++D ++ D++++ L+ + E + + Sbjct: 61 AKLCHRMENYLDAVRSGKVSIDSDKLDYLFNGLDLIEKMLEKIASEGSEEIDEDVSGLVE 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 +LA + +V D + + + E + L + Sbjct: 121 IFEKLAQGENVGKKESKPAGTVETSQANNDSEKSESKKKPEKEADYMYEEDEALLHVVNE 180 Query: 182 --------------LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 L + + ++ + I +V V + + F+ Sbjct: 181 AKKKGYDVIYTKVILAENVQLKSARMYMVFHGIEELGGEIIKSVPS-VEDIENEKFDREV 239 Query: 228 VSPKISTPPVLKLAAEQAPTGRVER----------------------------EKTTRSN 259 I+ LKL + + VE+ EK Sbjct: 240 ELYVIAKVEPLKLQEKLSAISEVEKVIVKKVEIKHKSEVKEKEKEETKEEKHEEKKKNVK 299 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 + ++RV +EK+D L+NL+GELVI +S + L N ++ S+ QL R DLQ Sbjct: 300 ITQTVRVDIEKLDTLMNLMGELVIARSRIIDI---LKKYNIKEVDESLAQLSRITLDLQN 356 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 VM +RM+P+ YVF+R+PR+VRD++ LGK++ + G TELD++ +E I DPL HL+R Sbjct: 357 IVMKVRMVPISYVFNRFPRMVRDISKNLGKEINFVMKGEDTELDRTFVEEIGDPLVHLIR 416 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 N+LDHGIE E+R+A GK VG LILSA H+G N+ IEV DDG GL+RE+IL KA +GL Sbjct: 417 NALDHGIETKEERIAKGKPPVGTLILSARHEGNNVVIEVEDDGRGLDREKILKKAIERGL 476 Query: 440 TV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 + + D++V +F PGFST EQV+++SGRGVGMDVVK ++ + G V I+SK+G Sbjct: 477 VDEVKASGLPDEKVYEFLFMPGFSTKEQVSELSGRGVGMDVVKNTVESLNGTVHIESKKG 536 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GT + I LPLTLAI+ + V+V ++ +P++ + +L ++ + + V+ RG Sbjct: 537 LGTKVIIKLPLTLAIIQALLVKVDKYIYAIPISVIDSTLIVLPDEIQMVQN-KEVIVKRG 595 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 E +PI++LW V + + E + VV+++ R+Y + VD LIGQ +V+K+L + Sbjct: 596 EVIPIIKLWDVLGMKHNE-ELDELNVVVVKVANRKYGIAVDTLIGQEDIVIKSLGKLFAD 654 Query: 617 VPGISAATILGDGSVALIVDVSALQA 642 V S LGDGS+ALI+D L Sbjct: 655 VKEFSGGATLGDGSIALIIDTLNLVE 680 >UniRef50_C6XM20 CheA signal transduction histidine kinase n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XM20_HIRBI Length = 693 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 251/668 (37%), Positives = 392/668 (58%), Gaps = 20/668 (2%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D F QTFF+E DELL E LQPE D+E LN +FRA HSIK GAG F L Sbjct: 3 DFEQFRQTFFEECDELLQRFEDVATTLQPEGNDSETLNELFRAVHSIKAGAGAFKLDRLV 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 H +E+ LD+ R + L D L +++ D+++E ++ + QE + L Sbjct: 63 VYAHELEDFLDQVRGDLIGLQADGPALIIQSGDVLRELVENAQSGQEAPDGLESVTLEKL 122 Query: 124 RQLALEAKGE-TPSAVTRLSVVAKSEPQDEQ-------SRSQSPRRIILSRLKAGEVDLL 175 RQL + E TP AV + ++ + + P+ + + G++++ Sbjct: 123 RQLNPKKAIEVTPVAVVENAEATRTSYEIYFRPFRSMYETANEPQLLFEALSDLGDINIH 182 Query: 176 EEELGHLT-TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 + + + D ++ S + L D + +DITAV FV + ++T + +S + Sbjct: 183 IDTSKVVELSKLDPMESYFSWNIELCSDCSVEDITAVFEFVEDDCELTIKAKTISEADAE 242 Query: 235 PPVLKLAAEQAPTGRVE--------REKTTRSNESTSIRVAVEKVDQLINLVGELVITQS 286 V + + + E + SIRV +EKVDQL+N+VGELVI Q+ Sbjct: 243 EIVKSSSVDDKSPDGAQVIVGKSAKPETERAKPQLGSIRVDLEKVDQLVNMVGELVIAQA 302 Query: 287 MLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGK 346 M + S + + + ++ L R LQE VM+IRM P++ +FSR+PRLVRDL+ K Sbjct: 303 MALESISSEIGIAQVNQLQALEDLTMRTRQLQEGVMAIRMQPIKALFSRFPRLVRDLSTK 362 Query: 347 LGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILS 406 L K V L L G +TE+DK++IE + DPLTH++RN +DHGIE+PE R+ AGK + G + LS Sbjct: 363 LEKDVTLILEGEATEVDKTIIEELSDPLTHMIRNCMDHGIEMPEDRVQAGKKAQGTVRLS 422 Query: 407 AEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQV 465 AE + G I I V+DDG GL+ ++++A+A QGL + ++ +++ M+IF PGFSTA V Sbjct: 423 AEQRNGRILIRVSDDGRGLDPDKVVARAIQQGLIAEGDELTKEDIEMMIFRPGFSTASAV 482 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 +DVSGRGVGMDVV+RNIQK+GG + + SK+G G+ + LPLTLA+LDGM V A E ++ Sbjct: 483 SDVSGRGVGMDVVRRNIQKLGGRITLDSKKGHGSCFTLALPLTLAVLDGMLVATAGERYV 542 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVI 584 +PL++++E++ P + + + G +VL +RG + +V+L ++ TE + + VI Sbjct: 543 IPLSSIVETVCPAPSQIKQMPDGGQVLSLRGNTIRLVDLCGCMGLSRKGLTEPLRKLAVI 602 Query: 585 LQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +++ GR+ ++VD+L+GQ QVV+K+LE+NY +PG++ + ILGDG V LI+DV L + Sbjct: 603 VETEFGRQVGIVVDELLGQQQVVIKSLETNYYNIPGVAGSAILGDGRVRLILDVDGLVTM 662 Query: 644 NREQRMAN 651 + ++N Sbjct: 663 TPKPSLSN 670 >UniRef50_A6GS07 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GS07_9BURK Length = 659 Score = 601 bits (1550), Expect = e-170, Method: Composition-based stats. Identities = 226/657 (34%), Positives = 358/657 (54%), Gaps = 19/657 (2%) Query: 1 MS--MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS +D+ FF EA +LLAD+E +L L+ D E LNA FRA H+IKG AG FG Sbjct: 1 MSTDIDLDSIKSVFFAEAYQLLADVENLILQLEKNPEDLELLNAAFRAIHTIKGSAGVFG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F+ + H +E +LD R E+Q ++ + NL L D + +++ ++ + Sbjct: 61 FANITHFVHDLETVLDRVRNQELQFDSALGNLVLACCDQVHTLVESLERGVDAADLDQQC 120 Query: 119 ICQA------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 + + L+ L+ + S T ++ D P I K+G+ Sbjct: 121 VAEQAGLTGQLKAYLLDEPADAVSTGTSQWLIQVELGVDTFRDGFDPYSIFNYLAKSGKF 180 Query: 173 DLLEEELGHLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 +E +L H+ L + + AI + +E +I F+ E +++ + Sbjct: 181 KSMEPQLQHIPKLGEFDPESCFLGFKAIYETEQSEAEILDAFEFLPEECKVSV--TSAAV 238 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 + +EQ + K +++IRV +K+D LINLVGELVI + + Sbjct: 239 AVPVTEEKNTVSEQVRELKTAARKAPVKAATSTIRVQSDKLDALINLVGELVIANAGTVE 298 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 ++ + L+ + + ++++ + +RM+ + F R+ R+VRD A LGK+ Sbjct: 299 QARKSQSFA---LLEATCAVGALIEEIRDGALGLRMVEIGECFQRFQRVVRDTAQSLGKE 355 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V+L + G TELDKS++E+I DPL HLVRN++DHG+E P++RL AGK L L+A H Sbjct: 356 VDLIIQGEETELDKSVVEKISDPLMHLVRNAMDHGLETPDERLGAGKQDKAKLTLNAYHD 415 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVS 469 GG+I IEV+D+G GL E+I KA +G+ + +++S+ ++ MLIFAPGFSTA VTD+S Sbjct: 416 GGHIVIEVSDNGRGLVHEKIRTKAIEKGIVSATQSLSESDINMLIFAPGFSTAAAVTDIS 475 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVVKRNI+ + G V ++SK+G GTT I LPLTLAI+DG + V + V+++PL Sbjct: 476 GRGVGMDVVKRNIEALRGTVNVRSKEGVGTTFEIRLPLTLAIIDGFQIAVGNSVYVIPLA 535 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 V E ++ + ++RGEYLP + L KVF K + ++++ GG Sbjct: 536 YVRECVELT-GQGGGSDAVDLSYDLRGEYLPCIRLRKVFGETSDKPKREN--IIVVSHGG 592 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 + ++ D+L+G+ Q V+K L + P +S TI+G+G VALIVD+ L + + Sbjct: 593 LKVGIVADRLLGESQTVIKPLGGLFEGNPAVSGGTIMGNGEVALIVDIPKLISEVGQ 649 >UniRef50_Q3A5B1 Chemotaxis protein histidine kinase n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5B1_PELCD Length = 887 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 229/652 (35%), Positives = 354/652 (54%), Gaps = 15/652 (2%) Query: 1 MSMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M M IS + + F EADELL ++EQ LL + DAE + ++R HS KG +G F F Sbjct: 244 MQMLISPEMLERFVQEADELLQNVEQGLLAWSDDKLDAEGIAELYRNVHSFKGNSGFFSF 303 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 +++ TH ME LLD A+ G N L D ++ + Q + D + Sbjct: 304 GDMEKLTHQMETLLDIAKEGGEFSNGSPAEALLGCLDALRGAVADISQGGKGVIEEVDEL 363 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L + ET + + + + ++ ++ + +G L E + Sbjct: 364 LKQLVRYVPTEDAETTPEDSEPARIPEDCLRESAVPAEDLGEDDDTSSASGSRLLGEILV 423 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 + ++ E+ + ++E ++ E + + +I Sbjct: 424 EEGLADEGEI-----------AEVIEEQRKPLGELLVERGKVGPEQLAKALEIQKQSGQA 472 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 ++ + + + IRV + K+D LINL+GE+VI ++ML + S +L+ + Sbjct: 473 KSSGGTNGAAMPSKGKPPAMNRQDIRVDLAKLDDLINLIGEMVIAENMLLR-SPDLEGLE 531 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 + + Q+ + RDLQE M IRM+P+ +F R RLV DL+ K GK+V+L L G Sbjct: 532 LDNFSKAAQQMSKIVRDLQEMAMIIRMIPVSGLFRRMIRLVHDLSVKSGKKVDLQLFGQE 591 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TE+DK++IE+I DPL HL+RNSLDHG+E P +RLAAGK G + LSA HQ G + IEV Sbjct: 592 TEVDKTVIEQITDPLVHLLRNSLDHGLETPAERLAAGKPEKGVVKLSARHQEGEVWIEVQ 651 Query: 420 DDGAGLNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDG GLNR++IL+KA +GL + ++SD E+ LIF PGFSTA++VTDVSGRGVGMDV Sbjct: 652 DDGRGLNRDKILSKAIGKGLVAGDGSHLSDKEIYNLIFQPGFSTADKVTDVSGRGVGMDV 711 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK+N++K+ G +E+QS G G+ I + +PLTLAI+DGM VR+ + I+PL A+ E +P Sbjct: 712 VKKNLEKIKGKIEVQSTPGQGSRITLRIPLTLAIIDGMLVRIGESRCIVPLLAIREIFRP 771 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 D+ + G+ + +VR + P+V L ++ G++++L+ + LLVD Sbjct: 772 TTDDITVMPDGQELAKVRESFHPVVYLDRLLEEPADYNAIEDGVLIVLEYQDKFLCLLVD 831 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 +++GQ Q V+K L V S TILG+G V LI+DV+ L + QR Sbjct: 832 EILGQQQTVIKGLSDYIGNVRIASGCTILGNGEVCLILDVATLVDEHVGQRR 883 Score = 84.1 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 50/265 (18%), Positives = 100/265 (37%), Gaps = 4/265 (1%) Query: 35 PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLET 94 E +NAIFR HS+KG AG + + H E+LLD R G++Q+ + + ++ Sbjct: 99 GHGETMNAIFRLFHSMKGSAGFLELNHIAHVAHAAESLLDMIRSGKIQMIPEHVQFLCQS 158 Query: 95 KDIMQEQLDAYKQS--QEPDAASFDYICQALRQLALEA--KGETPSAVTRLSVVAKSEPQ 150 D +E +D +Q + + ++I + L + A +A + E S +E Sbjct: 159 CDFAKEAMDHVEQELNDQGMEEAANHISELLAKAAEDALSRIEHASTDGAEQAAVAAESN 218 Query: 151 DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITA 210 D + + + L+A + D L + L L V+ AD L + + Sbjct: 219 DAAEPNDAAEPNEDAGLEADDFDDLMQMLISPEMLERFVQEADELLQNVEQGLLAWSDDK 278 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 + I + + + + ++ Q T ++ + + + Sbjct: 279 LDAEGIAELYRNVHSFKGNSGFFSFGDMEKLTHQMETLLDIAKEGGEFSNGSPAEALLGC 338 Query: 271 VDQLINLVGELVITQSMLAQRSSEL 295 +D L V ++ + + EL Sbjct: 339 LDALRGAVADISQGGKGVIEEVDEL 363 >UniRef50_Q0W7Z2 Chemotaxis histidine kinase n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W7Z2_UNCMA Length = 653 Score = 599 bits (1544), Expect = e-169, Method: Composition-based stats. Identities = 194/654 (29%), Positives = 350/654 (53%), Gaps = 24/654 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S + F EA E L ++ LL L+ DA+ + IFR+AH++KG + + GF ++ Sbjct: 1 MSAYRDMFVSEAREHLQNLNSSLLALEKCPTDADVIQEIFRSAHTLKGMSASMGFKEMET 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H ENL D R G++ +T ++ + ++ D ++ +DA + E + + + + Sbjct: 61 LCHRTENLFDRIRNGQLVADTRVVTVLFKSLDTLEAMVDAIEAG-ESGSLDVAALVKEIE 119 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG---- 180 + + + P + S + + + + + A E + Sbjct: 120 SMDVNSACSGPQPQVQAHEAQPSGAAHAAADTPEVQSMAIPAGAAAGSKEFEVVVTVEKS 179 Query: 181 ------HLTTLTDVVKGADSLSAILPG--DIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + + +++ +P DI ++ ++++D+ E + + + Sbjct: 180 CEFKGIRAFLVIQQLSEIGKVASTVPDIKDIEDERFGQEFTVLLQSDRTAGEIEKKARNV 239 Query: 233 STPPVLKLAA---EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 + K+ ++A G + S+R+ ++++D ++NLVGELVI++ L Sbjct: 240 AEIGAAKVTEIVRKEAAGGPARPAGKEGTKVIHSVRIDIDRLDIIMNLVGELVISRGRLF 299 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 + + +L ++G + R+ DLQ VM IRM+P+++VF+R+PR+VRD++ K GK Sbjct: 300 EICGKQ---GIHELNETLGMVDRSITDLQNEVMRIRMLPVDHVFNRFPRIVRDISKKEGK 356 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 ++E T+ G TELD+++++ I DPL HL+RN++DHGIE PE R+A GK + G + L A Sbjct: 357 EIEFTIEGQDTELDRTVLDEISDPLNHLIRNAVDHGIEKPEDRIAQGKPATGQIQLIARR 416 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVT 466 + N+ IE+ DDG G++ +R+ KA +GL ++ MS++E MLIF PG STA++VT Sbjct: 417 ERSNVIIEIIDDGKGIDVDRVKRKAIDKGLITQAQADAMSEEEGVMLIFKPGLSTADRVT 476 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 +VSGRGVGMD+VK I+ +GG V+I++ G GT + LP T+AI+ + V V E + + Sbjct: 477 EVSGRGVGMDIVKTKIESLGGTVKIETHLGKGTKTILKLPPTIAIVQALLVNVGAEKYAI 536 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 + V+E+ ++ D+ + G V+ +R LP+ L+K F+V + + V+++ Sbjct: 537 SITNVVETEYVKDKDIKTI-NGNEVIVIRDTILPLYRLYKFFDVE-VDSSLKRHTAVVVE 594 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 G + ALLVD + Q ++ VK L + V G+ TI+G+G V I+DV+ + Sbjct: 595 KGEEKVALLVDSIESQQEIFVKPLGGLLQNVKGLEGVTIMGNGRVVPILDVATI 648 >UniRef50_Q52880 Chemotaxis protein cheA n=25 Tax=Alphaproteobacteria RepID=CHEA_RHIME Length = 758 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 259/748 (34%), Positives = 396/748 (52%), Gaps = 101/748 (13%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + FF E +E LA++E LL L D E +NA+FRA HSIKGGAG FG L Sbjct: 1 MDMNEIKEIFFQECEEQLAELESGLLKLNDGDRDPETVNAVFRAVHSIKGGAGAFGLDDL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H+ E LD R ++ N D++ + L + D++ + +A + D A + + Sbjct: 61 VSFAHVFETTLDCVRSNRLEPNQDVLKVMLRSADVLADLTNAARDGGGVDEARSRQLIKE 120 Query: 123 LRQLAL---------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR------- 166 L LA A TP+ V + V E + S Sbjct: 121 LEALANGELPQAAAESAPKTTPAGVAPAAPVVNEEGFQPVAFSFDDFETGDEPTIEPSTY 180 Query: 167 -----------LKAGEVDLLEEELGHLTTLT--------------DVVKGADSLSAILPG 201 K + LL +L L ++ + + S L Sbjct: 181 EIVFKPKSDLYSKGNDATLLLRDLSRLGEMSIHCNMDTLPPLDRMNPEEAYFSWKISLKT 240 Query: 202 DIAEDDITAVLCFVIEADQITFETVEVS-------PKISTPPVLKLAAEQAPTGRVEREK 254 D E+ I +V F ++ + P P L + ++A E ++ Sbjct: 241 DKGEEAIRSVFEFAEWDCELDVALAGGTVGMDEDLPMQPVPFDLSILEDEAQAPAGEEDR 300 Query: 255 TTRSNEST---------------------------------------------------S 263 S + + Sbjct: 301 AAASEGDSRNAAVAAAQTASNVLQMAQSTARVSPENARNSQSASAAQAAAQQAASAATPT 360 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 IRV +++VD+LINLVGELVI Q+ML+Q E D + + +LQ+ R++Q+SVM+ Sbjct: 361 IRVDLDRVDRLINLVGELVINQAMLSQSVIENDTNGTSSINMGLEELQQLTREIQDSVMA 420 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IR P++ VF R R+VR++A GK V L G +TE+DK++I+++ +PLTH++RN++D Sbjct: 421 IRAQPVKPVFQRMSRIVREIADMTGKSVRLITEGENTEVDKTVIDKLAEPLTHMIRNAVD 480 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HG+E PEKR+AAGKN G + L+A+H+ G I IE+ DDGAG+NRE++ KA L ++ Sbjct: 481 HGLETPEKRVAAGKNPEGTVRLTAKHRSGRIVIELADDGAGINREKVRQKAIDNDLIAAD 540 Query: 444 -NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 N+SD+EV LIF GFSTA++++D+SGRGVGMDVVKR+IQ +GG + I SK G G+ Sbjct: 541 ANLSDEEVDNLIFHAGFSTADKISDISGRGVGMDVVKRSIQALGGRINISSKPGQGSIFT 600 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 + LPLTLA+LDGM V VA++ ++PL A++E+LQP + +H +R++ +R + P+V Sbjct: 601 MSLPLTLAVLDGMVVTVANQTLVVPLTAIVETLQPEASAIHSFGSSQRLISIRDSFCPLV 660 Query: 563 ELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 ++ ++ N GA+ +G+ ++++S GG + AL+VD + GQ QVV+K+LE+NY VPGI+ Sbjct: 661 DVGRILNFRGAQANPVEGVALLVESEGGGQRALMVDAIQGQRQVVIKSLEANYTHVPGIA 720 Query: 622 AATILGDGSVALIVDVSALQAINREQRM 649 AATILGDG VALI+DV A+ A +R Q + Sbjct: 721 AATILGDGRVALILDVDAIVAASRGQSL 748 >UniRef50_C1TKH2 Chemotaxis protein histidine kinase-like protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TKH2_9BACT Length = 670 Score = 597 bits (1540), Expect = e-169, Method: Composition-based stats. Identities = 216/670 (32%), Positives = 351/670 (52%), Gaps = 34/670 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+S + + DEA + L + + +L ++ + + ++ IFR AH++KG + T GF Sbjct: 1 MSTDMSQYLGAYLDEATDNLQQLNELILAVEQDRRSRDTIDEIFRTAHTLKGMSATMGFK 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E+ + R G+ L D I+ ++ D+MQ +DA + + Sbjct: 61 HMAELTHALEDRFSKVRSGDEDLTDDDIDHLFQSLDLMQSMVDAIRDGGTDQDTDISSLV 120 Query: 121 QALRQLALEAK------GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 LR+ +E E+ + + + LKA + Sbjct: 121 AQLREENVEPSSVEKGTEESELSDQEKEWLVDATKMGLAVYKVKVLLDQECLLKAARAYM 180 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGD---------------------IAEDDITAVLC 213 + L + + D L ++E T VL Sbjct: 181 VVSRLEEMGEIVKCDPSVDDLEKEQFDHSFIVYIGTKDEADVVKNAVMSVSEVVETEVLP 240 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 + +E + + E K + A+QA ++ S ++RV + ++D Sbjct: 241 WEVEKGETSEEVAVSDEKPAKAAAAPAQAKQADEAPKTKKAPKAKKTSQTVRVDIGRLDS 300 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L+NLVGELVI ++ + + E + + QL R + D+QE V +RM+P+ ++F Sbjct: 301 LMNLVGELVIGKARIERLVLE---SKLREFDEPLSQLGRISGDIQELVTKLRMVPVSFIF 357 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 R+PRL+RD++ LGK VEL + G TELD+++I+ I DP+ HL+RNS+DHG+E+PE R Sbjct: 358 DRFPRLIRDISKNLGKDVELVIEGQETELDRTVIDEIGDPMVHLIRNSVDHGVEIPEIRK 417 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEV 450 AGK + G + ++A +G ++ IEV DDG G++ + KA +G+ E MSDDE+ Sbjct: 418 TAGKPAQGTIRIAAYQEGNSVIIEVADDGKGIDPVAVGKKAVERGMVTEEALAEMSDDEI 477 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 +F PGFS A++VTD+SGRGVGMD VKR ++ +GG E++SK G GT + I LPLTLA Sbjct: 478 IQFVFLPGFSMAKEVTDLSGRGVGMDAVKRKVEALGGQFEVRSKVGEGTNVYIRLPLTLA 537 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 I+ + VRV +E + +PL V E++ RE D+ + G V +RGE L + +L + Sbjct: 538 IVLALLVRVGNETYAIPLENVDETILVREEDMKRMHGR-PVTLLRGEVLTLGDLASTLDA 596 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 E + VV++++G + +VD L+GQ ++V+K+L K+ GI+ ATILGDG+ Sbjct: 597 VRDDEERNEYPVVVVRAGRNKIGFVVDALVGQQEIVIKSLGRLLSKIKGIAGATILGDGN 656 Query: 631 VALIVDVSAL 640 VALI+DV++L Sbjct: 657 VALILDVASL 666 >UniRef50_A6GTW3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=1 Tax=Limnobacter sp. MED105 RepID=A6GTW3_9BURK Length = 722 Score = 596 bits (1536), Expect = e-168, Method: Composition-based stats. Identities = 241/690 (34%), Positives = 357/690 (51%), Gaps = 54/690 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +D+ FF EA +LLA++E ++L L+ D E LNA FRAAH+IKG AG FG Sbjct: 3 FELDLDASRGIFFTEARQLLAEVESYVLQLEQNPNDTEVLNAAFRAAHTIKGSAGVFGLL 62 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY-- 118 V+ H +E +LD R E+ + ++ L LE +D + E +D + + + S D Sbjct: 63 VITHFVHDLETVLDRVRNSEIGFDANMSTLVLECRDHISELVDCIEAGGDAEHVSPDMAV 122 Query: 119 ----ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQS---------RSQSPRRIILS 165 + L+ L+ +R V +E S P I Sbjct: 123 AQAGLTARLKAYLLQEDQPDAIQPSRPLEVNNTEQTWHVSVRLGRSTLCDGFDPAPIFSY 182 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILP--GDIAEDDITAVLCFVIEADQITF 223 GE+ + L L + D+ + L L D + I F+ E ++ Sbjct: 183 METYGELQAVIPVLDALPSFADLDAESCYLGFELRFVTDKGQAGIEDAFEFLTEESRVRI 242 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRV-------------------------------ER 252 + +P+ V L A + + Sbjct: 243 LSHSCTPEQWDALVSALPEGAARAAELLQEAGFPRPQEEALPEVMEVTGNAVTTASGKSK 302 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + S+ IRV +K+D LINLVGELVI + +++ L NH ++ S + Sbjct: 303 ATGKATPVSSFIRVPSDKLDALINLVGELVIANAGTVEQAKHL---NHTAMLESTSAVAG 359 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 ++++ + +RM+ + F R+ R+VRD A LGKQ++L + G TELDKS++E+I D Sbjct: 360 LIEEIRDGALGLRMVQIGETFQRFQRVVRDTAMGLGKQIQLEISGEDTELDKSVVEKIGD 419 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HLVRN+LDHG+E PE+R+AAGK + G L L+A H G+I IEV DDG GL RE+IL Sbjct: 420 PLMHLVRNALDHGLETPEERVAAGKPATGRLQLNAYHDSGHIVIEVNDDGRGLAREKILK 479 Query: 433 KAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 KA +G+ + +SD EV MLIFAPGFSTA++VTD+SGRGVGMDVVKRNI+ + G V++ Sbjct: 480 KAIEKGIVTPDQTLSDTEVNMLIFAPGFSTADKVTDISGRGVGMDVVKRNIEALRGSVQV 539 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 +S+ G G T I LPLTLAI+DG + V V+++PL+ V E L+ L + Sbjct: 540 RSRPGNGCTFEIRLPLTLAIIDGFMIGVGGSVYVIPLSYVRECLELPVDALGTEDRMDIH 599 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 ++RGE+LP V L KVF+ + ++++ GG R ++ D L G+ Q V+K L Sbjct: 600 YDLRGEFLPCVRLRKVFH--PNAKRPKRENIIVVSFGGVRAGIVADYLHGESQTVIKPLG 657 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSALQ 641 + + + IS ATI+G+G VALI+DV L Sbjct: 658 NLFEQNRAISGATIMGNGDVALIIDVPKLI 687 >UniRef50_C6HWL4 Putative signal transduction histidine kinase (CheA) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HWL4_9BACT Length = 671 Score = 595 bits (1534), Expect = e-168, Method: Composition-based stats. Identities = 207/662 (31%), Positives = 336/662 (50%), Gaps = 22/662 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + ++ + Q F EA E+L ++ + L+ D LN IFR AHSIKG AG G + Sbjct: 7 NDEMKEIVQDFLQEATEMLEGLDNFFVQLENNPEDKTLLNEIFRTAHSIKGSAGFIGLTR 66 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + E H EN+L++ R G M+ +I++ LE D ++ ++ K ++ D + I Sbjct: 67 IVEVAHHAENVLNQLRSGNMRAEPAVIDIILEAMDALKVLVNEVKTGEQAD-VDIEGINM 125 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 L L + + + + Sbjct: 126 KLDLLLQWGEDTGSGEGAKEEPAGDEMAAAVREEQAIDKVASSGSSSPSSPSSPSSPSPG 185 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + + V + + T Sbjct: 186 APETPAPPPPPAAAAPPASPPPPPPPSHPVASPPPSGAPGPQRVTPAASREETQGGEAQG 245 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH- 300 A G + +IRV + ++D ++NLVGELV+ ++ L + S ++D V Sbjct: 246 ARVGEAGEAD----------QTIRVEISRLDSVMNLVGELVLGRNRLVKLSGDVDGVVDF 295 Query: 301 ----GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 ++ ++ QL R DLQ +V+ RM P++ V ++PR+VRDL+ K+GK + L LV Sbjct: 296 EQRIKEVAEAISQLNRVTTDLQTAVIKTRMQPIKKVLGKFPRMVRDLSRKMGKSIRLELV 355 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G TELDKS+IE I DPL H++RNS+DHGIELP+ R++ GK+ G + +SA +G +I I Sbjct: 356 GEETELDKSVIEEIGDPLVHIIRNSIDHGIELPDDRVSHGKDPEGVVRISAYQEGNSIVI 415 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 E+ DDG G++ E++ KA +G+ E+ M+D E +IF PGFSTA++VTDVSGRGV Sbjct: 416 EINDDGRGIDVEKVKRKAVERGIITEEDSRRMTDAEAVNIIFLPGFSTADKVTDVSGRGV 475 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVV+ NI K+ G V++ +++G+G+T I LPLT+AI+ + V + E + +PL +V+E Sbjct: 476 GMDVVRTNISKINGSVDVTTQKGSGSTFTIRLPLTIAIIQALMVTIHPETYAIPLASVVE 535 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG--IVVILQSGGRR 591 +++ E D+ ++G E VL +R + LP++ L F V +T VV++Q G + Sbjct: 536 TVKITEKDIKTISGSE-VLNLRQQVLPLIRLRDEFKVPQEETGGAPPGSYVVVVQIGSKN 594 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 L+VD+L Q +VV+K++ + G++ ATI GDG V +I+DV + + + Sbjct: 595 LGLVVDRLPYQEEVVIKSMGPLLAGIRGLAGATITGDGKVVIILDVGEILQDVSLRTRGS 654 Query: 652 TA 653 T Sbjct: 655 TP 656 >UniRef50_D2LD03 CheA signal transduction histidine kinase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LD03_RHOVA Length = 701 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 249/656 (37%), Positives = 373/656 (56%), Gaps = 15/656 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++D++ F TFFDE E+L D++ L L A D+E LNAIFRA HSIK GA F F Sbjct: 8 ALDLNQFRATFFDECAEVLPDLDSRLSTLDANAADSENLNAIFRAVHSIKAGAAAFNFRS 67 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L H E LLD R M+L+ D+ ++ L D++ +DA + + Sbjct: 68 LVTFAHGFEALLDRLRDDRMELSADVASVCLRAGDVLAALVDAAQMDTAIPEGFGADVLA 127 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + L G + E + + R + + + + LG Sbjct: 128 EVEGLMNSDVGRASFPEATAAATDDGEMRIWRITFTPHRELFRHANEPLLIIRELKRLGE 187 Query: 182 LT-----------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 L D + S L + I V FV + + E Sbjct: 188 LDVCCDRCELPDLERLDPEESYLGFSFRLRTKASRAAIDEVFEFVDQDCDLVVEVEPAET 247 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 T + +E P + ++ + +RV + +VD+LIN+VGELVITQ+ML Q Sbjct: 248 PRETKVPPRALSESLPAAGRDGS-ERKAKSPSFVRVDLARVDRLINMVGELVITQAMLTQ 306 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + SE + +L + R+LQE VM+IRM P VF+R RLVRDL+ KLGK+ Sbjct: 307 QLSEHGTNMRDQRVQGADELAAHIRELQECVMAIRMQPARTVFARMGRLVRDLSHKLGKK 366 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V L G TE+DK+++E ++DP+TH++RN++DHGIE+PE RLAAGK + LSA + Sbjct: 367 VRLVTSGDETEVDKTIVEELVDPITHMIRNAIDHGIEMPELRLAAGKPEEAVIHLSATQR 426 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVS 469 GNI I + DDGAG++ E++LAKA S+G+ + +S++E+ LIFAPGFSTAE+VT+VS Sbjct: 427 AGNILITIADDGAGIDTEKVLAKAISKGIVRDDAKLSEEEIHELIFAPGFSTAEKVTEVS 486 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV+RNI +GG + S QG G++ +++PLTLA+LDGM V V +E +I+PL Sbjct: 487 GRGVGMDVVRRNIASIGGRIHTNSVQGQGSSFTLVIPLTLAVLDGMHVAVREEKYIIPLA 546 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG- 588 +++E+++P + +AGG+ V+ +RGEY+ ++ L ++FNVAG ++ +VV++++ Sbjct: 547 SIVETVRPDRRQIRSVAGGD-VIFIRGEYIRLIHLHRLFNVAGEGEDSHPSLVVVVETEN 605 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 G + L+VD+LIGQ Q V KNL N VPGI+ ATILG+G VALI+++ + +I Sbjct: 606 GTKAGLVVDELIGQQQFVFKNLNENADPVPGIAGATILGNGRVALILNLEDICSIA 661 >UniRef50_Q1PXP0 Similar to chemotaxis histidine kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXP0_9BACT Length = 606 Score = 594 bits (1531), Expect = e-168, Method: Composition-based stats. Identities = 226/645 (35%), Positives = 355/645 (55%), Gaps = 59/645 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD + + F E+ + L +E +L L+ + + +N IFR HS KG AG G + Sbjct: 20 MDDPEIVKEFLTESGDHLESVESQILQLEENPDNTDIINTIFRPIHSTKGSAGFLGLKDM 79 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 +H +E LLDEAR+G +++ II + E DI++ Sbjct: 80 GTVSHELETLLDEARKGNLKITPLIIEILYEGVDILKRL--------------------- 118 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 +VAK + + S ++ ++K V Sbjct: 119 ------------------RGLVAKKVEKIDVSDEIVDYAPVIVKIKNALVG------QKA 154 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 T + G+I EDD+ L + Q + V I T + A Sbjct: 155 TESAPSKPQHLGEILVEKGEITEDDLDKALEEQEKLQQKKIGEIIVEKGIVTKETIDSAL 214 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + P S +++V ++K+D L+NLVGELVI +++ + ++ + Sbjct: 215 KTLPATAP---------VSETVKVDIQKIDSLVNLVGELVIANALIKDLLENTNSTSNKN 265 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + L + +D+Q+ VMSIRM+P++ F + RLVRD++ K GK+V+L + G TEL Sbjct: 266 ----ISHLGKIVKDIQDQVMSIRMVPIKSTFQKMSRLVRDVSKKAGKKVKLEVSGEETEL 321 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DKS+IE I DPL H++RNS+DHGIE E+R+AAGK ++G++ L A H+GGNI IE+ DDG Sbjct: 322 DKSVIESIGDPLVHILRNSVDHGIEPEEERIAAGKPALGHVYLDAFHKGGNIFIEIRDDG 381 Query: 423 AGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL ++++L KA +G+ +++ ++ LIFA GFSTAE++TD+SGRGVGMDVVK+N Sbjct: 382 RGLRKDKLLKKAIEKGIMSENATLTEQQIFGLIFAAGFSTAEKITDISGRGVGMDVVKKN 441 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+++ G VEI S++G GT I I LPLT+AI+DGM V+V ++ +I+P+ ++ ES++P++ D Sbjct: 442 IERLRGKVEISSEEGKGTKISIKLPLTMAIIDGMIVQVGNQKYIVPMLSIEESIRPKKDD 501 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + + V+ VRG LP+V L + +NV K + I++I++S G+R +LVD LIG Sbjct: 502 ISTIQQRGEVINVRGNILPMVRLHQWYNVEPKKYAPWEAIILIVESEGQRCGILVDDLIG 561 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 Q Q+V+K L +R V G+S + ILGDG V LI+DV + + Sbjct: 562 QQQIVIKRLGEQFRNVKGVSGSAILGDGRVGLILDVGGIMNLALN 606 >UniRef50_C4V496 Histidine kinase n=3 Tax=Selenomonas RepID=C4V496_9FIRM Length = 679 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 215/682 (31%), Positives = 362/682 (53%), Gaps = 49/682 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F DE+ E L + + LL L+ + +N IFR AH++KG + T GF+ + E Sbjct: 2 DNQYMDMFLDESHEHLQSLNEGLLRLEENMEEISAVNDIFRNAHTLKGMSATMGFAKIAE 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH ME++LD R+ +++LN DI++ + D +++ +D+ + D + L Sbjct: 62 LTHEMEDVLDLVRKEQLKLNEDIMDTLFKCLDSLEQMVDSVGNGEAEDVVDVSDLVAKLS 121 Query: 125 QLAL-------------------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILS 165 ++ A + + V+ K++ + Sbjct: 122 SISKGTPAPAEAAPSAAAAPAADGASSDLGIDDIDIDVMKKAKEAGMNIFHVKVTLMESC 181 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVI 216 LKA ++ L + + V A+ L + + + + V Sbjct: 182 VLKAARSVMVMHALDEVGDVIKSVPPAEDLEQEKFEHSFDVVIATSADTEAVKNAVDTVS 241 Query: 217 EADQITFETVEVS-------------PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS 263 E + I E ++ + P K AA G + ++S S Sbjct: 242 EIEDIGVEELDPDALGKQIEPAPAQTAPAAAPAAKKPAAPAKKAGAKSAPAAKKPHQSQS 301 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 +RV +EK+D L+NL+GELVI + L Q DL+ ++ Q+ R DLQ VM Sbjct: 302 VRVDIEKLDTLMNLMGELVINKVRLEQIGQTH---RMSDLMETLEQMDRVTGDLQNIVMK 358 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM+P+ VF+R+PR+VRD++ +LGK++ LT+ G TELD+++I+ I DP+ HL+RNSLD Sbjct: 359 VRMVPVSAVFNRFPRMVRDVSKELGKEINLTIEGEETELDRTVIDEIGDPIMHLLRNSLD 418 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-- 441 HG+E P+ R A GK+ VG + L A H+G N+ I +TDDGAG++ ++I KA +G+ Sbjct: 419 HGVESPDAREAKGKSRVGEVGLIARHEGNNVVIMITDDGAGIDADKIRRKAVEKGMISQS 478 Query: 442 -SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 ++++ D + LIF PGFSTAEQ+TD+SGRGVGMDVV+ I+ + GHV++++ G+ Sbjct: 479 EADSLDDADAVRLIFLPGFSTAEQITDISGRGVGMDVVRSKIEALSGHVDVETHIDEGSI 538 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 +I LPLTLAI+ M VRV +E++ +PL ++ ++ D+ + + V+ +RGE +P Sbjct: 539 FKIKLPLTLAIIQAMLVRVQEEMYAIPLTSIDSTINIEPTDIQTVQN-KEVIVLRGEIIP 597 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 I+ + + V K ++ + VV++ +G + ++VD LIGQ ++V+K L + + + Sbjct: 598 IIRMEEALQVPHTK-DSDEHFVVVVHAGEAKAGIVVDNLIGQQEIVIKTLGNLFAGLKLF 656 Query: 621 SAATILGDGSVALIVDVSALQA 642 AT+LGDG VALI+DV+ + Sbjct: 657 GGATVLGDGRVALILDVATMIQ 678 >UniRef50_A3NFT9 Chemotaxis protein CheA n=3 Tax=Burkholderia pseudomallei RepID=A3NFT9_BURP6 Length = 758 Score = 592 bits (1528), Expect = e-167, Method: Composition-based stats. Identities = 291/741 (39%), Positives = 391/741 (52%), Gaps = 90/741 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D++ F + FF+EA+E L ME LL PDAE LN IFRAAHSIKGGAG FGF+ Sbjct: 17 MSIDLTQFSEVFFEEAEEHLRAMETLLLACDVSHPDAEDLNGIFRAAHSIKGGAGAFGFA 76 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFL---------------------ETKDIMQ 99 L TH++E LLD R+ E+ L +++ FL ++ + + Sbjct: 77 ELTGVTHVLETLLDRIRKRELPLRAAMVDAFLRATDLLAVMLAAYRSGEALPEQSIEATK 136 Query: 100 EQLDAYKQSQE--------------PDAASFDYICQALRQLALEAKGETPSAVTRLSVVA 145 L+ Q + P ++ D L ++ +A +T AV Sbjct: 137 RSLERLSQGEGAYGADAVMPDAEPVPASSEHDGDAHPLPEVLGDAYRKTSPAVMPPPGCL 196 Query: 146 KSEPQDEQS------------------------------------RSQSPRRIILSRLKA 169 + + + Sbjct: 197 HVRIAAGAPIDDEGVMSCLASYGRVIEHYPGGCDQPWRYLCETSRDAADIHGTLTFLIDP 256 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 + + + + + D +P D A + S Sbjct: 257 DRLTIDQAAPEGGELPPEWEEEHDGYGFFVPVPTIGDGDAAHEAEARDEAGHARAETGRS 316 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNES-----------------TSIRVAVEKVD 272 + + A + RS ++ +SIRV+VEKVD Sbjct: 317 DAQANASAGGSSVASAGVPALASPSPPRSRQAGDAAGGDSMAKRNGAGGSSIRVSVEKVD 376 Query: 273 QLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYV 332 QL+NLVGELVITQSMLAQ + ELD L+ +GQL+RN+R+LQE+VMSIRM+P+ V Sbjct: 377 QLLNLVGELVITQSMLAQAAIELDANQRERLVGGIGQLERNSRELQEAVMSIRMLPISAV 436 Query: 333 FSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR 392 F+R+PR+VRDLA +LGKQVEL ++G TELDK IE++ DP+ HLVRNS+DHGIE P+ R Sbjct: 437 FNRFPRVVRDLAMQLGKQVELQMIGEHTELDKGFIEKLADPMMHLVRNSVDHGIEAPQAR 496 Query: 393 LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAM 452 + GK + G L L A QG +I IEV DDG GL RERIL KA GL VSE+M+D EV M Sbjct: 497 VRRGKPATGRLTLRASQQGSDIAIEVIDDGGGLQRERILEKARESGLPVSESMTDREVWM 556 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 LIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I I LPLTLAIL Sbjct: 557 LIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAISIKLPLTLAIL 616 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 DGMSVR+ +I+PL + E++ P + D+ + RV+ VRGEYLP+ L +F Sbjct: 617 DGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQRSGRVVNVRGEYLPLRSLADLFETGE 676 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 T+ + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + ATI+GDG VA Sbjct: 677 DTTDG--SLALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAAGATIMGDGRVA 734 Query: 633 LIVDVSALQAINREQRMANTA 653 LI+DV +L R + A Sbjct: 735 LILDVMSLVMSARNSANVSEA 755 >UniRef50_B2IGA2 CheA signal transduction histidine kinase n=6 Tax=Alphaproteobacteria RepID=B2IGA2_BEII9 Length = 747 Score = 592 bits (1527), Expect = e-167, Method: Composition-based stats. Identities = 252/715 (35%), Positives = 379/715 (53%), Gaps = 71/715 (9%) Query: 3 MD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD + QTFF E +E LA++E LL +Q D E +NA+FRA HSIKGGAG F Sbjct: 1 MDAMMAIKQTFFQECEEQLAELENGLLAIQDGDKDPETVNAVFRAVHSIKGGAGAFSLDD 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L +H+ E LD+ R G + N D++ L D++ + + A + DA I + Sbjct: 61 LVRFSHVFETTLDDLRAGVLAPNADVLKTLLRAADMLADLVRAARDGGTVDAGRSQAIIE 120 Query: 122 ALRQLALEAKGETPSA-------------------------------VTRLSVVAKSEPQ 150 L L + + +P+ Sbjct: 121 DLAALTHGQAEGVSAETNDDDDGQAGFSFQPVQACLDDLDFDDFQNEPAETLFTIRFKPK 180 Query: 151 DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS--AILPGDIAEDDI 208 + + ++L LK + + L L+++ L+ L E + Sbjct: 181 PDLYAKANETALLLRGLKELGEMEVVCDASDLPLLSELDPEGAYLTFTITLLTQHDEAAV 240 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES------- 261 + FV +T E+ S + + A + + Sbjct: 241 RGIFEFVEWDCDLTIESCATPAAKSEVYADVTSPDLAAADAHQDISDKQKKAQIVHAEPV 300 Query: 262 ----------------------------TSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 +IRV +++VD+LI+LVGELVI Q+MLAQ + Sbjct: 301 SESDQGVIQPERREQERRESNTTAGLSPATIRVDLDRVDRLIDLVGELVINQAMLAQSVT 360 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 E ++ T + +L++ R++Q+SVM+IR P++ VF R PRLVR++A GK V L Sbjct: 361 EAGLARATNIATGLDELEQLTREIQDSVMAIRAQPVKSVFQRMPRLVREVAAMTGKSVRL 420 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 G +TE+DK++IER+ DPLTH++RN++DHG+E PEKRLAAGK G + L A H+ G Sbjct: 421 VTEGENTEVDKTVIERLTDPLTHMIRNAIDHGLETPEKRLAAGKPEEGTVHLCALHRSGR 480 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I IE+ DDGAG+NR R+ A +GL ++ ++DDE+ LIF PGFSTA ++D+SGRG Sbjct: 481 IVIEIADDGAGINRPRVKQIAIDKGLISADVTLTDDEIDNLIFLPGFSTAATISDISGRG 540 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV+R+IQ +GG + I S+ G G+T + LPLTLA+LDGM V VAD+ ++PL A++ Sbjct: 541 VGMDVVRRSIQALGGRISISSRPGQGSTFTMSLPLTLAVLDGMVVSVADQTLVVPLTAIV 600 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS-GGRR 591 E+LQP+ D+H G RV+ +R ++ P++++ + + +V+++++ GG R Sbjct: 601 ETLQPKSTDVHGFGGAARVIAIRDQFTPLIDVGRELAYRRVPADPLASVVILVETEGGVR 660 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 ALLVD + GQ QVV+K+LE+NYR VPGI+AATILGDG VALI+DV ++ R Sbjct: 661 NALLVDAIQGQRQVVIKSLEANYRHVPGIAAATILGDGRVALILDVESIVTSART 715 >UniRef50_B1YI82 CheA signal transduction histidine kinase n=2 Tax=Exiguobacterium RepID=B1YI82_EXIS2 Length = 663 Score = 591 bits (1524), Expect = e-167, Method: Composition-based stats. Identities = 222/668 (33%), Positives = 368/668 (55%), Gaps = 34/668 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++++ F DE+ E L + LL+ + D ++ IFR+AH++KG +GT G+ + Sbjct: 1 MDLNEYLGLFLDESIEHLQAINSSLLIFEQRLDDEAVIDQIFRSAHTLKGMSGTMGYDAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + TH ME+ LD R ++I++ + ++ ++ Q + + Sbjct: 61 ADLTHEMESALDLVRSKTQPATPELIDVLFVAAEQLETMVEDISQGGTGKLDVTTTVIRL 120 Query: 123 LRQLALEAKGETPS-------------AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + + + + + V SVV +S Q+ + LKA Sbjct: 121 KQFIDPDTESGKDTVKAAGTVMMNFECDVYSESVVRQSMASGYQAYVITVELSADVILKA 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEADQ 220 V ++ + L +L + +D L +DI + V E Q Sbjct: 181 ARVYMVFDRLQNLGDVILSNPTSDELEQEQFETRFDVLFVTMKTAEDIQQEIKAVSEVAQ 240 Query: 221 ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNE---STSIRVAVEKVDQLINL 277 + + EVS + + L E+ P E +T + + +IRV +E++D+L+NL Sbjct: 241 VLIQPFEVSVEPAAAATLLEPVEETPAVNTSIETSTETQTPIAAKTIRVNLERIDRLMNL 300 Query: 278 VGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 E +I + L + ++E V DL ++ +++R +LQ V+++RMMP+E VF+R+P Sbjct: 301 FEEFIIDRGRLERIAAE---VGSSDLTETVERIKRGTNELQSLVLTLRMMPIEQVFNRFP 357 Query: 338 RLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGK 397 R+VR ++ +GK ++L + G+ TELD+++I+ I DPL HL+RN++DHGIE R++AGK Sbjct: 358 RMVRSVSKDVGKNIKLHITGAETELDRTVIDEIGDPLVHLIRNAVDHGIESKADRISAGK 417 Query: 398 NSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLI 454 GNL L A H G + IE+ DDGAG+N+ER+ A +GL E ++ +E AML+ Sbjct: 418 PVEGNLSLRAYHSGNRVFIEIEDDGAGINQERVTKIALEKGLLTEEEATLLTPEEAAMLL 477 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 FAPGFSTAE VTD+SGRGVG+DVVK I+ +GG V +++K+G GT RI LPLTL+I+ Sbjct: 478 FAPGFSTAETVTDLSGRGVGLDVVKSKIESLGGEVFVETKRGEGTIFRISLPLTLSIISA 537 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 M V++ E + +PL A++E+ ++ + A E+V + RG+ +P++ L +V+ + + Sbjct: 538 MLVKLDQETYAIPLTAIIETTSLKQDVILQ-AHREKVFDFRGQLVPLISLNQVYGLPHVE 596 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 +A VV+++SG + L+V +LIGQ ++V+K L S + IS ATILGDG VALI Sbjct: 597 ADA--YSVVVVRSGEKLAGLMVSELIGQQEIVMKPLGSYLEGIRAISGATILGDGQVALI 654 Query: 635 VDVSALQA 642 +D +AL Sbjct: 655 IDSNALLR 662 >UniRef50_D1B6A0 CheA signal transduction histidine kinase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B6A0_THEAS Length = 679 Score = 590 bits (1521), Expect = e-167, Method: Composition-based stats. Identities = 211/681 (30%), Positives = 343/681 (50%), Gaps = 46/681 (6%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD+S + F DEA + L ++ + LL + D +N IFR AH+ KG + T GF Sbjct: 3 NMDMSQYIGAFLDEATDQLKNLNELLLAAEQNQSDMGIINEIFRVAHTFKGMSATMGFDS 62 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + TH ME+LL AR GE LN++ ++L + D + +D + + + Sbjct: 63 MAGLTHAMEDLLGLARSGEHVLNSEDVDLLFKCLDAITAMVDNIRGGGSDKDVDVKALVE 122 Query: 122 ALRQLALEAKGETPSAVTRLS-----------VVAKSEPQDEQSRSQSPRRIILSRLKAG 170 L +L +A + ++ V ++ Q LKA Sbjct: 123 QLHRLVNKAHEAPAAKPAKVGKKVELTEQERGWVKEARHQGMAVYELRVALSPSCMLKAA 182 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAI---------LPGDIAEDDITAVLCFVIEADQI 221 ++ LG + L G + L + + +++V + E + Sbjct: 183 RAYMVVTRLGEMGELIKTQPGVEDLEREAFDTEFWVYVATHETGEALSSVASSISEVASV 242 Query: 222 TFETVEVSP-----------------KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSI 264 + + S+ +Q G + + S ++ Sbjct: 243 EVTPLNFDEDGGLSIGDMEDDEDEEEQSSSGTPQVSQGQQPQAGAAQAPQQGSKKGSRTV 302 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV + ++D+L+NLVGELVI ++ + + + E + QL R + ++QE V + Sbjct: 303 RVDIGRLDKLMNLVGELVIGRARIERLAQE---TKIKAFDEPLSQLGRISGEIQELVTKL 359 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ VF R PRLVRDL+ ++GK+V L + G TELD+++I+ I DP+ HL+RNSLDH Sbjct: 360 RMVPVSMVFDRLPRLVRDLSRQMGKEVRLVVEGRETELDRTVIDEIGDPMVHLLRNSLDH 419 Query: 385 GIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN 444 G+E PE+R GK G + ++A +G + IEV DDG G++ ++ KA +G+ +E Sbjct: 420 GLESPEERERNGKPREGTITVAAYQEGNGVIIEVQDDGRGIDTAKVRRKAVERGIVTAEQ 479 Query: 445 ---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 M+D+E LI PGFSTA+ VTD+SGRGVGMD VK ++ +GG ++ SK G GT + Sbjct: 480 AQMMTDEEAIRLILLPGFSTADVVTDLSGRGVGMDAVKSKVESLGGQFQVFSKLGEGTRV 539 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 I LPLTLAI+ + +RV DE++ + L V E+L ++++ + G V VRGE L + Sbjct: 540 VIRLPLTLAIVLALLIRVGDEIYAISLENVEETLLVPKSEIKYVH-GTPVTTVRGEILTL 598 Query: 562 VELWKVFNVAGAKTEATQGI--VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 +L + + + + VV + R +VD +GQ ++V+K L +KV G Sbjct: 599 SDLAGILSTPVDREGVEEHPVVVVRVGRDRNRIGFVVDDFVGQQEIVIKPLGKLLQKVRG 658 Query: 620 ISAATILGDGSVALIVDVSAL 640 ++ ATILGDG+VALI+D ++L Sbjct: 659 VAGATILGDGNVALILDAASL 679 >UniRef50_Q1NT42 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=2 Tax=Deltaproteobacteria RepID=Q1NT42_9DELT Length = 804 Score = 589 bits (1519), Expect = e-166, Method: Composition-based stats. Identities = 227/642 (35%), Positives = 347/642 (54%), Gaps = 34/642 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F DEA E L +E H+L L+ D + +N IFR H+IKG +G + + Sbjct: 189 DTELLGGFLDEAFEHLESIEVHVLELEQNPDDLDSINNIFRPFHTIKGVSGFLNLMTINK 248 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ--SQEPDAASFDYICQA 122 +H ENLLD+ R G+ +++D+I+L L D +++ ++ K + I Sbjct: 249 LSHATENLLDDVRNGKRPMDSDVIDLVLTVGDTLRQMVENIKDVLENGVERYQEFDISSQ 308 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L + +G++P A + VA P + + Sbjct: 309 LEHIKALQEGKSPEAPPPEAPVADEGPNAQP----------------------------V 340 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 D A A + A T + A Sbjct: 341 AVPADADPTVGGAPADAAVQPAAEPAAAPAGPTPSQQPPTPTPRPAAKPAGQDREEAAPA 400 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 G + + SI+V +EK+D L+N VGELVI QS L +++ + + Sbjct: 401 TGPGAGDRDTAAAQKKKFGASIKVDIEKLDSLVNAVGELVIMQS-LVRQNPLISKIADPK 459 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L+ QL R DLQ + MS+RM+P++ F + RLVRDLA K GK+V+L + G+ TE+ Sbjct: 460 LLKDFSQLGRITSDLQRTAMSMRMVPIKQTFDKMIRLVRDLAKKSGKKVDLVMEGADTEI 519 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPL H++RNS+DHGI+ PE+R GK G + L A +GGN+ IE+ DDG Sbjct: 520 DRNMVDSIYDPLVHMMRNSVDHGIQPPEERAKHGKPPTGKVYLRAYQKGGNMVIEIEDDG 579 Query: 423 AGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL+ +I KA S+GL ENMSD ++ LIF PGFSTA+Q+TDVSGRGVGMDVVK+ Sbjct: 580 EGLSSAKIRKKAESRGLIQSGENMSDFDLNNLIFMPGFSTADQITDVSGRGVGMDVVKKA 639 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++K+ G VE+ S+ G G+ I LPLTLAI+DG+ VRV E +I+P A+ ES++P + Sbjct: 640 VEKLRGKVEVNSEAGKGSLFTIRLPLTLAIIDGIIVRVGTERYIIPTIAIQESMRPERKN 699 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNV-AGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + + G L +RG +PIV L+++F + + T+ +GIVV++++ GR ALLVD+L+ Sbjct: 700 YNTVHGRGESLLIRGHLVPIVRLYELFGLDDPSVTDPCEGIVVVVENEGRLRALLVDELL 759 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 G+ +VV+KNL + G++ TILGDG V LI+D++ + A Sbjct: 760 GKEEVVIKNLGGM-SDIRGVAGGTILGDGRVGLILDLAGIIA 800 >UniRef50_Q4ZYC8 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=8 Tax=Pseudomonas RepID=Q4ZYC8_PSEU2 Length = 705 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 233/702 (33%), Positives = 360/702 (51%), Gaps = 54/702 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++ QTF EA ELL ME+ LL L+ E D + + A+FRAAH+IKG AG FG + Sbjct: 1 MSINLDQAQQTFIVEARELLQAMEESLLQLESEPGDLDAIGAVFRAAHTIKGSAGLFGLT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH++E++LD R G + +N ++I + L++ D M E +D E Sbjct: 61 PIVSFTHIVEDVLDRLREGSVSVNAELIAVLLKSGDHMLELIDVVASRGEQLQQPALERE 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR----------------SQSPRRIIL 164 ALRQ + ++ ++ ++ + P + Sbjct: 121 AALRQALQVFQAPASASAADIASAQVVSDDEQSADVLWHISLRFGVDVFRNGMDPLSFLR 180 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIEADQIT 222 G++ + + T+ + L I V FV E + Sbjct: 181 YLNTLGQMVQVTTLTDSIPTVEAWDPESCHLGFEIDFRSAAGHAAINEVFDFVREDCAVE 240 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTG-----------------------------RVERE 253 ++ +P P +L ++ + R Sbjct: 241 ITPLDETPDHVEPTGTELVSQPEHSPVVASGELLGDQRAVPRTPATATATATAVERPSSG 300 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 ++ + +RV +K+D+LINLVGELVI + + + D + L + + Sbjct: 301 SEQKNKDGRYVRVNADKLDELINLVGELVIASAGASLLAKSCD---NDPLQEASSTVSGL 357 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 + + + +RM+P+ F+R+ R+VRD++ +LGK ++L + G+ TELDK+++E+I DP Sbjct: 358 VEQILDGALHLRMIPIGDTFNRFRRVVRDVSQELGKDIDLIINGAETELDKTVVEKIGDP 417 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HL+RNS+DHGIE E R AAGK + G+L L+A H G+I IE+ DDGAGLNRERIL K Sbjct: 418 LMHLLRNSMDHGIESAEARRAAGKPAKGHLSLNAYHDSGSIVIEIADDGAGLNRERILDK 477 Query: 434 AASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +GL + +++D E+ LIF PGFSTAE VT++SGRGVGMDVVKRNI + G V++ Sbjct: 478 AQQRGLVAAGASLTDQEIYNLIFEPGFSTAEAVTNLSGRGVGMDVVKRNITLLRGTVDLD 537 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT +RI LPLTLAI++G V + +++PL+ V E ++ E + L L Sbjct: 538 SQPGQGTIVRIRLPLTLAIINGFLVGIDQSTYVIPLDMVQECIELDEHN-RQLTRDSGYL 596 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 ++RGE LP+V L FN G VV+++ + L+VD L+G+ Q V+K L Sbjct: 597 DLRGEVLPLVYLRDHFNHEGPAARRQN--VVVVRYAEHKAGLVVDDLLGEFQTVIKPLGK 654 Query: 613 NYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + + GIS +TILG G+VALI+D+ AL +T A Sbjct: 655 LFGALRGISGSTILGSGAVALILDIPALLNQIVHMEARSTQA 696 >UniRef50_UPI0001AEC1E2 probable two-component sensor (CheA) n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC1E2 Length = 697 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 298/692 (43%), Positives = 408/692 (58%), Gaps = 45/692 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+DI F+ FFDE+DE L DMEQ L+ L E+PD E+LN+IFRAAHSIKGG+G FGF Sbjct: 1 MSIDIEQFHGVFFDESDEHLDDMEQLLMSLDVESPDPEELNSIFRAAHSIKGGSGIFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+MENLLD+AR E+ + DI+N+ LET D++++ L+AY+ S Sbjct: 61 ALMNLTHVMENLLDKARNNELSVTADIVNVLLETLDVLKDTLNAYRDETPVPEDSIAERI 120 Query: 121 QALRQL-------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV- 172 + L + G+ S V+ + ++ P I + + Sbjct: 121 KILNGVINGQYTDPAPGDGDDSSEVSVNAHNESAQDDSFGFFDDEPNSAIEAADDSFGFF 180 Query: 173 -DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF----------------- 214 D E+ T D +I+ + + A Sbjct: 181 DDEPVNEVLSHGDNTKSENNDDDGFGFFDDEISNNTVDAQTETTKTETAEVEQGFGFFED 240 Query: 215 ------------------VIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 A + + + + Q T K + Sbjct: 241 APSATNINTSLEIASSNNAQSASTQSNTATTSNNDKAPTSGVAPTTTQVKTPPKPPAKKS 300 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 + ES SIRV K+D ++NLVGELVITQSML+ +++ L ++ +LQRN R+ Sbjct: 301 TARESASIRVDTTKIDAMVNLVGELVITQSMLSMIGQDVEGQVGERLQLAIDELQRNTRE 360 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 +QESVMS+RM+P+ F+R+PRLVRDLAGKLGKQVEL L G STE+DKSLIE+I+DPLTH Sbjct: 361 IQESVMSMRMLPLTATFNRFPRLVRDLAGKLGKQVELVLQGGSTEIDKSLIEKIVDPLTH 420 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 LVRNS+DHGIE+P+KR+AAGK G +ILSAE +GG+I I + DDG GL+R++IL KA S Sbjct: 421 LVRNSIDHGIEMPDKRVAAGKPEKGTVILSAEQKGGSIIISIIDDGGGLHRDKILDKARS 480 Query: 437 QGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 GLTVS++M D EV LIF PGFSTAE +TDVSGRGVGMDVV+RNI+ +GG ++I+S G Sbjct: 481 NGLTVSDDMPDSEVWQLIFQPGFSTAEAITDVSGRGVGMDVVRRNIESIGGRIDIESSAG 540 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 G+ I LPLTLAI+DGM V V ++F++PL ++ES QP + L L G + VL +R Sbjct: 541 EGSAFFIHLPLTLAIVDGMCVSVGKQIFVIPLLNIIESFQPTKQQLKTL-GNDTVLYIRD 599 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +Y P+V L+ V A T+GIVV+L+S +R+ +LVD L+GQ QVV+K+LE +YRK Sbjct: 600 QYWPLVPLYDFMEVEDAALSPTEGIVVLLESSKKRFGVLVDALVGQQQVVIKSLEEHYRK 659 Query: 617 VPGISAATILGDGSVALIVDVSALQAINREQR 648 V GI+ ATI+GDG VALI+D ++ + Sbjct: 660 VAGIAGATIMGDGKVALIIDADSIATTYTSSQ 691 >UniRef50_Q31HM7 CheA signal transduction histidine kinase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HM7_THICR Length = 650 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 207/652 (31%), Positives = 343/652 (52%), Gaps = 15/652 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + Q F EA EL+ +++ L+ L+ D++ LNAIFR H+IKGGAG G + L E Sbjct: 2 DEEILQDFLVEASELVEQLDEQLVELENSPSDSDLLNAIFRGFHTIKGGAGFLGVTPLIE 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+ D+ R G+++ ++ ++ + D++ + + + + + L Sbjct: 62 VCHRAENVFDKIRNGDVEYDSTAADVIMRAFDVITDYIQQLNDGARELEEADEGLLSELD 121 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE--ELGHL 182 L P++ + S P+ E P I ++ + Sbjct: 122 ALWKGGATPQPASEPAQEEM-TSHPKLELPEGVDPDGEISDDEFEALLNQRDALSGSDSS 180 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVL------CFVIEADQITFETVEVSPKISTPP 236 + T+ VK A GDI +D+ A+L + E + T +P+ P Sbjct: 181 ESETEEVKLALPDDVDPDGDITDDEFEALLNQRDMLEGIQEPQETVSATPPPAPETVKPT 240 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 +++ + E + + +++RV ++D+++NLVGELV+ ++ L Sbjct: 241 PPPAPKKESKPETPKPEASKAATAESTVRVDTRRLDEIMNLVGELVLVRNRLLTL--RSS 298 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 L ++G L DLQ SVM RM P++ VF R+PR+VRDLA KLGK++EL L Sbjct: 299 DGPEEALSNAVGNLDHVTTDLQASVMKTRMQPVKKVFGRFPRVVRDLARKLGKEIELELK 358 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G T+LDK+L+E + DPL HLVRNS+DHG+E+P+ R AGK G +IL+AE +G +I + Sbjct: 359 GEETDLDKNLVEALADPLVHLVRNSVDHGVEMPDVREQAGKPRKGTVILAAEQEGDHILL 418 Query: 417 EVTDDGAGLNRERILAKAASQGL---TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 +TDDG G++ + + KA +G+ + + D LI + GFSTA+Q++D+SGRGV Sbjct: 419 SITDDGKGMDPDVLRRKAVEKGMMDEVSANQLDDKAAFELIMSAGFSTADQISDISGRGV 478 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK I K+ G ++I S G GT I+I +PLTLAIL + V D+ + +PL +V E Sbjct: 479 GMDVVKSMITKLNGSIDINSVLGEGTQIKIRVPLTLAILPTLMVSFEDDSYAIPLTSVQE 538 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 + ++ + G+ ++ +R + +P++ L K V+I+ G +R Sbjct: 539 IFDYDASQINRI-DGQMMVRLREKSIPLLFLSDWLAPDQVKENYEGDKVIIVSIGNQRAG 597 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 L+V+Q+ GQ +VV+K L + + G + ATI G+G++ALI+D+ + + Sbjct: 598 LVVEQVNGQEEVVIKPLGVMMKHLEGYAGATITGNGNIALILDLPGVIQRFQ 649 >UniRef50_C6E9E2 CheA signal transduction histidine kinase n=3 Tax=Geobacter RepID=C6E9E2_GEOSM Length = 604 Score = 586 bits (1512), Expect = e-166, Method: Composition-based stats. Identities = 211/651 (32%), Positives = 345/651 (52%), Gaps = 62/651 (9%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M++D + + F E ELL ++ L+ L+ DAE +N IFR+ H++KG + G Sbjct: 1 MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F +L + TH E++L+ R+GE+ LN +I+++ LE D+++ + K D Sbjct: 61 FDMLVKVTHKTEDVLNRLRKGELFLNPEIMDVILEAVDLVKTLVADIKGG--------DI 112 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + + L + T +V+A + E+ + P Sbjct: 113 VERDLEGTISKLIPFLSENATEATVLAPTSASKEEKGATPPPPP---------------- 156 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + + ++ S + P Sbjct: 157 ---------------------------ESVADTAQEATAREESAPADTGASKAAAAAPAA 189 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 + + + K +++++RV V+++D L+N VGELV+ ++ + Q S+ Sbjct: 190 QPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQLHSDYQTG 249 Query: 299 NH-----GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 D +L +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L Sbjct: 250 LDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDL 309 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 ++G TELD+S+++ I DPL HL+RN+LDHG+E P++RLAAGK+ G ++LSA H+G Sbjct: 310 VIIGEETELDRSVVDEIGDPLIHLIRNALDHGLETPDQRLAAGKDRTGTVVLSAAHEGNQ 369 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSENMS---DDEVAMLIFAPGFSTAEQVTDVSG 470 I I + DDG G++ ERI KA +GL E ++ + E+ L+F PGFST EQ TD+SG Sbjct: 370 IVISIKDDGRGIDPERISKKALEKGLVTDEQLASMGNREILDLLFLPGFSTKEQTTDLSG 429 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVV+ NI+K+ G +EI++ G GT + LPLTLAI+ + V V EV+ +PL + Sbjct: 430 RGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKEVYSIPLAS 489 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR 590 V+E+++ +++ H + GG+ VL++R LP++ L + F+ T+ VVI+ + Sbjct: 490 VIETMRVSKSEFHMI-GGQEVLKLRDSVLPLLRLQQTFSCQEYYTDRDTCYVVIVGVAEK 548 Query: 591 RYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 R L+V +L+GQ +V +K+L +PGI +TI+GDG VALIVD L Sbjct: 549 RIGLIVTRLLGQQEVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPMGLI 599 >UniRef50_B0TC94 Chea signal transduction histidine kinase n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TC94_HELMI Length = 691 Score = 585 bits (1509), Expect = e-165, Method: Composition-based stats. Identities = 209/692 (30%), Positives = 347/692 (50%), Gaps = 46/692 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F+ EA E L + + LL ++ + E ++ +FRAAH++KG + GF + E Sbjct: 1 MDQYMDLFYSEAKEQLDILTRDLLAIESGSSSQEMIHEMFRAAHTLKGSSAMVGFPAVTE 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E+LL + R G+ L+ I+L + D +Q L + ++ Sbjct: 61 MTHKVEDLLGKVREGKHILSAKDIDLVFQALDYIQNCLFHPEAVDSAKTEELARKLADIQ 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK-AGEVDLLEEELGHLT 183 A G +V + + + ++ ++ R + A L +L Sbjct: 121 DQPAPANGPADDSVAKRTAQLAELRSRGTYKGKATEILVTFRPECAMRSVRFFLILNNLK 180 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCF----------------------------- 214 +V+ + S + + A ++ + +L + Sbjct: 181 EFGEVIGSVPAWSEMEANENAYEEASILLDWRQGSRNDLERALNVADVRCIEIRSGDDGN 240 Query: 215 -------VIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVA 267 E EV+ + A + P + + + + I++ Sbjct: 241 EAFSAVGAAEPPTALPAATEVTVAKAAAGYRGTEAVKTPAADLASQGDSSHRPTEYIKIE 300 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHG-----DLITSMGQLQRNARDLQESVM 322 ++D L+NL+GE++I+Q+ ++ + ++ QL R LQ+ +M Sbjct: 301 ANRLDLLMNLIGEMLISQARFSRIQENYLERHGQTPLAVEMAEETHQLARITTQLQDGLM 360 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 R++P+ VFSR+PR+VRDLA K GK+V L + G TELDK++++ I DP+ HL+RNS+ Sbjct: 361 KARLVPIGGVFSRFPRIVRDLARKQGKKVNLMMEGQDTELDKTVVDLIGDPIMHLIRNSV 420 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHGIELPE R AGK G + L A H+G I +E+ DDG G++ ++LAK + GL Sbjct: 421 DHGIELPEARRQAGKPEEGTIRLKATHEGSRIVVEIGDDGRGIDESKVLAKGRALGLIPE 480 Query: 443 -ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 + S E+ LIFAPGFSTAE+VTD+SGRGVGMDVVKR I + G ++IQS+ G GT Sbjct: 481 GQTPSRQEILDLIFAPGFSTAEKVTDISGRGVGMDVVKRAISSLHGIIDIQSEPGQGTAF 540 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 ++ LP+TLAI+ G+ VRV E I+PL+ V+ES Q + ++ + GG V VRG +P+ Sbjct: 541 QLQLPITLAIIQGLIVRVERESLIIPLDNVLESFQLQNKEVQSV-GGREVFSVRGRIVPL 599 Query: 562 VELWKVFNVAGAKTEATQGI--VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 L + + + + VV++ RR L VD LIG+ ++V+K +++ + + Sbjct: 600 YRLQDLLQIPLDPEKGRRKYRSVVMVGLAERRMGLEVDSLIGKKEIVIKPIKAPWLNLEH 659 Query: 620 ISAATILGDGSVALIVDVSALQAINREQRMAN 651 + ATILGDG V+LI+++ A+ +R+ N Sbjct: 660 FAGATILGDGRVSLILNIGAIFRRGAGERLQN 691 >UniRef50_A5MZ45 CheA2 n=28 Tax=Firmicutes RepID=A5MZ45_CLOK5 Length = 692 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 207/700 (29%), Positives = 352/700 (50%), Gaps = 69/700 (9%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD S + F +EA + L + + LL L+ E + +++N IFR AH++KG A T GF+ + Sbjct: 1 MDTSQYMSMFLEEAMDNLQILNESLLQLEQEPHNIDKVNEIFRVAHTLKGMAATMGFNEV 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME++L R G++++ D++ + + D +++ + + E + I + Sbjct: 61 GELTHKMEDVLSRFRDGKLKVTQDVVTVLFKCLDTLEQMIKNIEDGVEEE-VPIKGIIEE 119 Query: 123 LRQLALEAKGETPSAVTRL-------------------------SVVAKSEPQDEQSRSQ 157 L +A + +VV ++ + S Sbjct: 120 LENIANLQNDDKEKESKEDIQEEKQNDSAKGTKNIQVELNEYDINVVKQARDKGFNSYQI 179 Query: 158 SPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL---------SAILPGDIAEDDI 208 + LK+ V L+ + L + + V + L E+ + Sbjct: 180 RVTISENTLLKSARVFLIFKSLEEMGEIIKSVPNTEDLENENFDFEVDLTFVTTSDENKV 239 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKLAA-------------------------- 242 L + E ++++ E +++ + +K Sbjct: 240 YENLMNISEVEEVSIEKIDIEAEKIKKMQIKDKQSEQIKSIIQKEASSKVEDIKPKPALV 299 Query: 243 -EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 ++ + +K S+RV +E++D+ +N+V ELVI ++ L Q SS Sbjct: 300 PDKDKGNKKAAKKEPHKKVHQSVRVDLERLDKFMNMVSELVINRTRLEQISSNY---KLN 356 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L ++ Q+ R DLQ+ VM IRM+P++ VF+R+PR++RDL+ +L K++EL + G+ TE Sbjct: 357 ELNETLEQVARTTSDLQDLVMKIRMLPLDTVFNRFPRMIRDLSVELDKEMELVIEGADTE 416 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+++I+ I +PL HL+RN+ DHGIE E+R++ GKN VG + L A +G I+V DD Sbjct: 417 LDRTVIDEIGEPLIHLIRNAADHGIESKEERISKGKNPVGKISLIAYQEGTKAVIKVVDD 476 Query: 422 GAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 G+G+ +++ KA + G+ E MSD++V LIF GFST +VTD+SGRGVGMDVVK Sbjct: 477 GSGIPVDKVREKAENMGINT-EGMSDNDVRNLIFLQGFSTNTEVTDISGRGVGMDVVKTK 535 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I +GG V++ S++ G+ I LPLTL I+ + V V +E + L+ V + + D Sbjct: 536 ISALGGTVDVVSEKNEGSAFVIRLPLTLQIIQVLLVGVGNETMAISLSYVDRVIDYK-ED 594 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 L + + V+ G + +V L+ V +K + +VI++ G + L+VD L+G Sbjct: 595 LIKMTNNKEVIIYNGNVISLVRLYDKLRVEKSKNN--KNYIVIVKVGEKTVGLMVDSLLG 652 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 Q ++V+K L + + ATILGDG V LI+DV+AL Sbjct: 653 QREMVIKPLGKTLQNLKEYMGATILGDGLVTLILDVAALV 692 >UniRef50_A6M113 CheA signal transduction histidine kinase n=4 Tax=Clostridium RepID=A6M113_CLOB8 Length = 718 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 223/701 (31%), Positives = 359/701 (51%), Gaps = 59/701 (8%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + F DE +E + +EQ +L L+ + ++ + IFR AH++KG + G+ ++ Sbjct: 6 EMPEMVSAFLDEVEEQIQLLEQGILELEKKDEVSKVIQDIFRVAHTLKGSSSAMGYEKMK 65 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH MEN+LD+ R M++ IIN+ E D + + + + D I L Sbjct: 66 SLTHEMENVLDKIRNNFMEVTKPIINVLFECTDCLTLLKRDFIEYKNDTEVDIDDIIGKL 125 Query: 124 RQLA------------LEAKGETPSAVTRLSVVAKSEP---------------------- 149 R + + K E V +V + + Sbjct: 126 RCIQSIDVDKTEVNQFMGVKREISHEVDNKRIVFELDDDKRYTIENEKINGRSCVVCEIK 185 Query: 150 --QDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA-ILPGDIAED 206 +D ++ I+ GEV + L + + L L E Sbjct: 186 ISEDSLMKATRAFLILNLLNDMGEVIGSSPNVLELLDEDENITTIKYLLISELGIKELES 245 Query: 207 DITAVLCFVIEADQITFETVEVSPK------------ISTPPVLKLAAEQAPTGRVEREK 254 I L V +A+ +E ++ + I V E +V +E Sbjct: 246 RIKHELMDVDDANVFDYEFTKLDKEKIDTKDIENIAKIEGEIVTDKIDEINGKKKVIQEI 305 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQ 309 S +IRV +E+++ ++NLVGE+VI Q+ +AQ S+ L + DLI + Sbjct: 306 KNEKKLSQTIRVDIERLEHMMNLVGEMVIEQTRIAQVSNTLHNKYIADDSVEDLIGISSR 365 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 + R +LQES+M RM+P++ +FSR+PRLVRDLA LGK+VEL L G TE+D+++IE Sbjct: 366 VSRVVSELQESIMKARMVPVQQLFSRFPRLVRDLANSLGKEVELVLEGGETEMDRTIIED 425 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 I DPL HLVRNSLDHGIE P R+ K S G L + A HQ ++ + + DDGAGLN E+ Sbjct: 426 ITDPLIHLVRNSLDHGIEKPSTRIVKDKPSKGTLRIKAFHQENHVIVTIEDDGAGLNLEK 485 Query: 430 ILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 I A + + +E +S+ E+ LIF G STA V+DVSGRGVGMD+V+ +I K+ Sbjct: 486 IKQSAIKKEVISAQEAETLSEQEIINLIFQTGLSTANNVSDVSGRGVGMDIVRNHIDKLN 545 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G +++++K+G G+ I LPLTLAIL G+ V++ +E++ LP++ ++E ++ + ++ + Sbjct: 546 GIIDVETKEGEGSKFTIKLPLTLAILAGLLVKIHNEIYALPMSNIIEIVRKPKNEIEYIK 605 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 + V+ +R + P+V L F + + + +V+L +R+ ++VD+L+G ++V Sbjct: 606 N-QSVVVIRDKVHPLVWLHDYFKLPR-ENKKRNIFIVVLGIAEKRFGVVVDELVGNQEIV 663 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 VK L S K+ GIS ATILGDGSVA I DV + + + Sbjct: 664 VKPLGSYIGKIEGISGATILGDGSVAHIFDVVGISRMISNK 704 >UniRef50_Q3BR62 Chemotaxis protein CheA n=8 Tax=Xanthomonas RepID=Q3BR62_XANC5 Length = 669 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 241/680 (35%), Positives = 358/680 (52%), Gaps = 40/680 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD++ QTF E+ +LL DME+HLL + P + +NAIFRAAH+IKG G F L Sbjct: 1 MDMNQLMQTFLAESRDLLEDMERHLLEAERGEPSPDAVNAIFRAAHTIKGSGGLFDLPQL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH++E++LD R + L++++I L L D + ++ D + + Sbjct: 61 VGFTHVVESVLDLVRDEALSLSSELIGLLLVCCDHIHALVETAADPSHADPVALAAEAEP 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEP-------------QDEQSRSQSPRRIILSRLKA 169 L + VT +V + D SP ++I + Sbjct: 121 LLAQLQTYLQRSACGVTAAAVAQGAPEKQSGYWRITLKLFADALRFGNSPLKLIRNLRSL 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIEADQITFETVE 227 G V+ + ++ L D+ A+ L +L D I V FV E + +V Sbjct: 181 GSVESITTDISQLPAFDDLDPEANYLGFQILLRSDADRAAIEEVFEFVREDCDLEIVSVP 240 Query: 228 VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS-------------IRVAVEKVDQL 274 + + AA P + + S + IRV +K+D++ Sbjct: 241 APSDAAELLSAEAAASPTPNKPLAAVPSAASAPGRAAPDAAARSADARSIRVDADKLDRM 300 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 I+LVGEL+I ++ S+ L+ S L D++ES + +RM+ + FS Sbjct: 301 IDLVGELIIA---VSSTSANAQRTGDAQLLESASILAGLVEDVRESALQLRMVKIGGTFS 357 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+ R+V D+A +LGK + L + G TELDKS++E+I DPLTHLVRN++DHGIE E R+A Sbjct: 358 RFQRVVHDVARELGKDIALVVAGEDTELDKSVVEKIGDPLTHLVRNAMDHGIEPAEVRVA 417 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAML 453 GK + G + L+A H G+I I++TDDG GLNR+RILAKA +GL +SD +V + Sbjct: 418 RGKPARGTVGLNAYHDSGSIVIQITDDGGGLNRDRILAKALERGLIEPGRQLSDRDVFAM 477 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFSTAE+VT++SGRGVGMDVVKRNI + G VEI S G GTTI + LPLTLAI++ Sbjct: 478 IFEPGFSTAEKVTNLSGRGVGMDVVKRNITALRGTVEIDSTAGVGTTISVRLPLTLAIIN 537 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 G V V VF++PL+ V E ++ +++RG LP V L ++F + G Sbjct: 538 GFQVGVGKSVFVVPLDVVEECVEFTPD------YASDYIDLRGSVLPYVRLRELFALGGK 591 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 +V+++ G +R+ L+VD L+G+ Q V+K L + +V GIS ++ILG G VAL Sbjct: 592 TPSRE--SIVVIRQGAQRFGLVVDTLLGEWQTVIKPLSKVFAQVKGISGSSILGSGDVAL 649 Query: 634 IVDVSALQAINREQRMANTA 653 I+DV +L + A A Sbjct: 650 ILDVPSLIQQLHPNQDALAA 669 >UniRef50_B8GR06 CheA signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GR06_THISH Length = 691 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 210/694 (30%), Positives = 341/694 (49%), Gaps = 51/694 (7%) Query: 1 MSMD-ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS+D + Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MSLDSDDEILQDFLVEAGELLEGLSEQLVELERNPTDRDLLNAVFRSFHTIKGGAGFLNL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + L H E++ + R+G+ Q++ +++ L+ D++ + EP A + + Sbjct: 61 THLVAVCHRAEDVFNVLRQGQRQVDGALMDAVLQVLDVVNRMFGEIRGGVEPGPADPELL 120 Query: 120 CQA----------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + + + + P + + +L +++ Sbjct: 121 TRLESMTGPADAAPAPSPVAEAPPPAPEPAPPVSASPAVPAGDGDITDEEFEALLDAMQS 180 Query: 170 GEVDLLEEELGHLTTLTDVVKGAD---------------------------SLSAILPGD 202 G + +D + + S L + Sbjct: 181 GGSAPALAAAPAASHKSDEITEDEFESLLDELHGKGNAPVESKASPPAAGSSADPDLISE 240 Query: 203 IAEDDITAVL-----CFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTR 257 + + L V+ + + AA A + Sbjct: 241 DEFEHLLDELHGKGKAPVVASAKAAPAAAAPPAAKPAAAPAPAAAPAAAPAAATPATQAQ 300 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 TS+RV +++D ++NLVGELV+ ++ LA S++ + ++ L DL Sbjct: 301 PAAETSVRVDTKRLDDIMNLVGELVLVRNRLATLRSKMSD---EQVAKAVSNLDIVTADL 357 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q +VM RM P++ VF R+PR+VRDLA L K+++L L G T+LDK+L+E + DPL HL Sbjct: 358 QAAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLVHL 417 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 VRN++DHGIE PE+R+AAGK+ G+++LSAE +G +I + + DDG G++ + + AKA + Sbjct: 418 VRNAVDHGIESPEERVAAGKSRTGHVVLSAEQEGDHILLTIADDGKGMDPDVLRAKAVEK 477 Query: 438 GLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 GL + M+D + +IF GFST E ++D+SGRGVGMDVVK I ++ G +EI SK Sbjct: 478 GLMDEDAAQRMTDQDAFNVIFMAGFSTKEAISDISGRGVGMDVVKTRIAQLNGTIEIDSK 537 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 +G G+T+RI +PLTLAIL + V + ++ F LPL V E + + + + V+ V Sbjct: 538 KGQGSTLRIKVPLTLAILPTLMVVLGNQRFALPLANVSEIFDLDLSRTNHVDD-QEVIMV 596 Query: 555 RGEYLPIVELWKVFNVAGAKT-EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 R + LP+ L + + A VV++ G RR +VD LIGQ +VV+K L ++ Sbjct: 597 RNQALPLYYLRRWLARSDAPKVNRETQHVVVVFVGNRRVGFVVDSLIGQEEVVIKPLGAS 656 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +PG + ATI GDG +ALI+DV +L + Sbjct: 657 LHGLPGFAGATITGDGGIALILDVPSLLKAYARR 690 >UniRef50_C8X0K1 CheA signal transduction histidine kinase n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X0K1_DESRD Length = 871 Score = 583 bits (1503), Expect = e-165, Method: Composition-based stats. Identities = 220/652 (33%), Positives = 342/652 (52%), Gaps = 54/652 (8%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 + + F EA E +++LL L+ + + + + A+FRA H+IKG G + + Sbjct: 271 ISDPEITGEFISEAQEHFEIADENLLTLESDPDNLDAVAAVFRAFHTIKGTCGFLDLTPI 330 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E H ENLLDE R+ + ++++ D++++ + + +A Sbjct: 331 AELAHKAENLLDEVRKENLTFRGEVVDATFSALDMLKKMVGQLE--------------EA 376 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L A + + +PQ + SP+ Sbjct: 377 LGAGAEYVPDPSLRQTFDFVNRIRQQPQAAAPSAPSPQAA-------------------- 416 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 P + + VSP Sbjct: 417 -----------------PSTPEPASSEPESSAPAAPEPAPAASAGVSPSPEPSSAQPEPE 459 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 G + ++++ +++D L++ +GELVI +S++ Q +L + Sbjct: 460 TAPAQGEPRKNGQKGMQIKQTMKIDADRIDLLLDTIGELVIIESIVTQD-EKLSDLASPQ 518 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L ++ QL + R LQ+ MS+RM+P+E F R RLVRDL K GK+VEL +VG TEL Sbjct: 519 LERNLAQLTKITRSLQDMGMSMRMVPIETTFRRMARLVRDLGKKSGKKVELEMVGKETEL 578 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIEL-PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 DK+++E++ DPL H++RN++DHGIE PE R+AAGK++ G + L A H+GG+I I + DD Sbjct: 579 DKAMVEKLGDPLVHMIRNAVDHGIEPTPEDRVAAGKSAEGRIWLKAFHEGGSIHIVIEDD 638 Query: 422 GAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G GLNRE I AKA +G+ + MSD+E+ LIFAPGFSTA QVTDVSGRGVGMDVVK Sbjct: 639 GRGLNREAIAAKAVERGIIESANGMSDEEIYGLIFAPGFSTAAQVTDVSGRGVGMDVVKS 698 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+ + G++ I+S G GTT ++LPLT+AI+DGM ++V E +ILPL ++++S QP + Sbjct: 699 NIENLRGNIRIRSTPGEGTTFTLVLPLTMAIIDGMQIKVGSERYILPLLSIIQSFQPTKE 758 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + + G L RG LP+ L ++F V A+T+ TQ I V+++ GGR+ ALLVD+L+ Sbjct: 759 MVATVVGKGETLPFRGRLLPLFRLSELFGVDDAETDPTQAIAVVVEDGGRQVALLVDELL 818 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 GQ+Q V+K+L + G+S A+IL DG+ LI+DV+ + + Q + Sbjct: 819 GQNQTVIKSLGEAMGSIRGVSGASILSDGTPGLIIDVNGVVRMATNQGGGRS 870 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 102/311 (32%), Gaps = 28/311 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + + + + L D+E+++L + D + L+A+ R H+ KG AG G + E Sbjct: 125 DQEIFAAYIAQQESALGDLEEYILEYEKH-HDTDNLDAVRRLVHTAKGEAGVMGLGSIAE 183 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E D + ++ + L KD Q ++A ++ Sbjct: 184 VCHGLE---DYIQDQGQAISP---DTLLAFKDWFQSAVEACRRDAHLPDT---------- 227 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A+ V S A+ +++ +L + + ++ E + Sbjct: 228 -AAVMGLFTNEGEVQGPSAGAEGAASPAAPAAEASDDPLLQPVPISDPEITGEFISEAQE 286 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 ++ +L + D + AV T++ + + A + Sbjct: 287 HFEIADE--NLLTLESDPDNLDAVAAVFRAFH--------TIKGTCGFLDLTPIAELAHK 336 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 A E K + + +D L +VG+L A+ + D + Sbjct: 337 AENLLDEVRKENLTFRGEVVDATFSALDMLKKMVGQLEEALGAGAEYVPDPSLRQTFDFV 396 Query: 305 TSMGQLQRNAR 315 + Q + A Sbjct: 397 NRIRQQPQAAA 407 >UniRef50_B1ZR56 CheA signal transduction histidine kinase n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZR56_OPITP Length = 730 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 219/640 (34%), Positives = 326/640 (50%), Gaps = 53/640 (8%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F+ EA + L +E LLVL E + E LN+IFR+ H+IKG AG G + Sbjct: 143 QELLSEFYGEAVDHLQQIEAALLVLDHEPENPEALNSIFRSFHTIKGNAGFLGLVPMHTL 202 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E+LLD AR +++LN II L ++D +Q + +AL + Sbjct: 203 AHEVESLLDLARNHKLKLNAAIITEILRSRDALQAL--------------TQQVAKALEK 248 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 L + + S + R P ++ E Sbjct: 249 GQLPTQIISVSHLIRAVHRLSESPAGGLQAEAPAPPAPVAEKFVEVPLPPEPSAVLPPVP 308 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 P A Sbjct: 309 VAAEP--------------------------------------VTAHGAAPGPAPVAPFP 330 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 + ++RV EK+D L+++VGELVI QS L + + + V L Sbjct: 331 APAPAASATIAKVASGGTVRVNTEKLDSLMDVVGELVIVQSQLLETARHHNDVTGSPLQR 390 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 ++ QL R ++LQ + MS+RM+P++ F + RL RDLA GK+V G TELD++ Sbjct: 391 NVAQLSRITKELQHTAMSLRMIPIKQSFQKMERLARDLARDFGKKVSFVTSGEDTELDRT 450 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E I DPL H+VRN+LDHG+E P +R+AAGK G L L A HQG NI IE+ DDG G+ Sbjct: 451 VVEEIGDPLVHMVRNALDHGLEPPAERVAAGKPETGVLHLKAYHQGSNIVIELQDDGRGI 510 Query: 426 NRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 N ++I KA +GL ++ +E+ L+FAPGFSTAE+VT VSGRGVGMDVVKRNI+K Sbjct: 511 NPDKIYQKAIEKGLIAPGTTLAKEEILALVFAPGFSTAEKVTAVSGRGVGMDVVKRNIEK 570 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G +EI S+ G+T ++ LPLT+AI+DG+ VRV ++ FILP +V +L+P + Sbjct: 571 LRGKIEINSEVKRGSTFKVKLPLTMAIIDGLVVRVGEDRFILPSTSVQRALRPSRESVAT 630 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 + G VL++RG +PI L + F + +GIVVI++ G+ ALLVD+++ + + Sbjct: 631 VQGQGEVLDLRGRLVPIHRLHRRFGIPHQAENPWEGIVVIVEHSGKISALLVDEMVSKQE 690 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 VV+KNL + + +PG++ ILGDG++ALI+D + L Sbjct: 691 VVIKNLGAFMQGLPGVAGGAILGDGNIALILDPATLLQAA 730 >UniRef50_C8S642 CheA signal transduction histidine kinase n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S642_FERPL Length = 666 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 209/673 (31%), Positives = 362/673 (53%), Gaps = 39/673 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M DI +F + F EA E + ++ + L+ D + +N IFRA H+IKG AG G+ Sbjct: 1 MVDDIENFKEEFLQEAREYIENINLEFIKLEK--GDLQSVNEIFRAVHTIKGMAGFMGYK 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 ++E H++E +L + G++++++D++++ L + D +QE +D + S + D I Sbjct: 59 KIEELCHVLEAVLGAIKDGKIEISSDLVDVLLNSVDTLQELIDLVESSDTDEKDIDDVIV 118 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + E + E + + + E + + + +K+ ++ E L Sbjct: 119 NLRAIIDSEKRKEKADDIRDKQLPDEEESEINAGFKVEVQLAEETPMKSVRALVVIETLK 178 Query: 181 HLTTLTDVVKGADSLSAI--------LPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + ++ + + + + VL E ++ + +E + Sbjct: 179 EFGKIVKIIPSEEEMEKENFDGKFIIYMNTDNIEKVETVLSKDSEIEKYNIQKIEKEKRA 238 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE--------------------KVD 272 P +++ E ++T + + I+V + ++D Sbjct: 239 KKAPKKVKKSKKKDEKVEEEQRTDKVDSQKIIKVNQDALSKNAKPEKKVEFIKISTVQLD 298 Query: 273 QLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYV 332 +++NLVGELVI + L + S++ D +L ++ L + LQ+ VM +RM +E V Sbjct: 299 KIMNLVGELVINKGRLLKISTDYD---IPELAEAVSILDKIVSSLQDEVMQVRMEKIEKV 355 Query: 333 FSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKR 392 FS++PR+VRDL+ KLGK+VEL + G TELD+S++E++ DPL H+VRN +DHGIE PE+R Sbjct: 356 FSKFPRMVRDLSRKLGKEVELEMEGLDTELDRSVLEQMNDPLIHIVRNCVDHGIETPEER 415 Query: 393 LAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS---ENMSDDE 449 +A GK+ VG + +SA N+ IE+ DDG G++ E++ KA +GL E MS++E Sbjct: 416 VAKGKSRVGKIKISAWRDKNNVIIEIEDDGKGIDPEKVKEKAIERGLISREEAEKMSEEE 475 Query: 450 VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTL 509 + MLIF PGFST EQ T+VSGRGVGMDVVK ++K+GG V++ S++ GT IRI LP T+ Sbjct: 476 LKMLIFMPGFSTKEQPTEVSGRGVGMDVVKTTVEKLGGTVKLYSEKDKGTKIRIQLPPTV 535 Query: 510 AILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 AI+ + ++V E++ +P++ V+ ++ ++D+ + G E L VRG+ +P+ L ++F Sbjct: 536 AIIKSLLIKVGSEIYAIPISNVVGAIYLTDSDVENIHGSEFSL-VRGKLIPVFRLRQLFG 594 Query: 570 VAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDG 629 V G K E G +I++ ++ L+ D + ++V+K L K+ G + TILGDG Sbjct: 595 VNGTKPEKEVG--IIVEKENEQFMLVADAIADLQEIVIKPLYGYLAKIKGFNGVTILGDG 652 Query: 630 SVALIVDVSALQA 642 V I+DV + Sbjct: 653 RVVPIIDVFTIIE 665 >UniRef50_B9ZR99 CheA signal transduction histidine kinase n=2 Tax=Chromatiales RepID=B9ZR99_9GAMM Length = 715 Score = 581 bits (1499), Expect = e-164, Method: Composition-based stats. Identities = 221/717 (30%), Positives = 338/717 (47%), Gaps = 70/717 (9%) Query: 1 MSMDI-SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M++D + Q F EA ELL + + L+ L+ D + LNA+FR+ H+IKGGAG Sbjct: 1 MAIDPNDEILQDFLIEAGELLEGLNEQLIDLEQHPDDRDLLNAVFRSFHTIKGGAGFLSL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E++ + R GE Q++ +++ L D + + +P A D + Sbjct: 61 DPLVTVCHHAEDVFNLLRNGERQVDGHLMDTMLRVLDTLNVMFGDLRSGVDPTPAEAD-L 119 Query: 120 CQALRQLAL----------------------------------------EAKGETPSAVT 139 + LR++A +A GE V Sbjct: 120 VEDLRRMAKNEDVAGNSEPDAVATPDESPEPEPEPAPPAEVETTAMAAGDAAGEDSGLVG 179 Query: 140 RLSVVAKSE-------------PQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + E PQ Q + S S + + L + Sbjct: 180 ADDEITDDEFEALLDSLHGDGSPQAAQDSATSSNADAGSPSTDSDAAGPSGDEEDLISDD 239 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + D L A G A ++ + E + PP + + A Sbjct: 240 EFENLLDELQARGDGPPASAAPAPAAAESSTQEEPSVEPEAAASAAQEPPASEAKPQAAK 299 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 S+RV E++D+++NLVGELV+ ++ L+ ++ +L + Sbjct: 300 PAAAAAGARQAPQGEASVRVNTERLDEIMNLVGELVLVRNRLSMLRTQHVD---DELGKA 356 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 + L DLQ SVM RM P+ VF+R+PR++RDL+ LGK++EL + G T+LDK+L Sbjct: 357 ISSLALVTSDLQTSVMKTRMQPVNKVFNRFPRVIRDLSRSLGKEIELEIFGEDTDLDKNL 416 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 +E + DPL HLVRN++DHGIE PE R AGK G ++L A +G +I + + DDG G++ Sbjct: 417 VEALSDPLVHLVRNAVDHGIETPEVREKAGKPRKGTVVLGAAQEGDHIALLIKDDGGGMD 476 Query: 427 RERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + K +GL E M+D E +IF GFST +++DVSGRGVGMDVVK I Sbjct: 477 PHALRRKVVEKGLMEPAMAERMTDREAFNVIFMAGFSTKTEISDVSGRGVGMDVVKTKIS 536 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++ G +EI S+ G GTT+R+ LPLTLAIL + V + F +PL +V E L H Sbjct: 537 QLNGTIEIDSEIGVGTTLRVKLPLTLAILPALMVILDGRRFAIPLASVSEILDLDLTKTH 596 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 + + V+ VR + LP+ L + + VV++ + R+ L+VD L+GQ Sbjct: 597 YVDD-QEVIVVRNQALPVHYLKRWLKPGFVPEAKAESHVVVVHTADRKVGLVVDDLVGQE 655 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ--------AINREQRMANT 652 +VV+K L N + V G++ ATI GDG +ALI+DV+ L + R +R A T Sbjct: 656 EVVIKPLGQNLQGVKGLAGATITGDGGIALILDVADLVGLLTHKIPSAGRTRRPAQT 712 >UniRef50_B4U6X8 CheA signal transduction histidine kinase n=5 Tax=Aquificales RepID=B4U6X8_HYDS0 Length = 687 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 204/689 (29%), Positives = 342/689 (49%), Gaps = 50/689 (7%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + ++ F EA E L +E LL L+ + + E LN+ FR H+IKGGAG G + Sbjct: 5 EMREIFEEFLVEARENLEKLETDLLELEKDPTNQEILNSAFRVMHTIKGGAGFLGLDPIV 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 ET H E++L + R E ++ I +L L+ D ++E L+ + +E + + + L Sbjct: 65 ETAHKAEDILGKLRNAEFIISPAINDLLLKAADKIKEYLEKAENQEELEPDN--ELLSQL 122 Query: 124 RQLALEAKG---------------ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL---- 164 + + + + ++ + S P +L Sbjct: 123 EDVLKNPDKYSDKYTTINKSATVSDQSVSSKEKEAKPQIGEKNFEESSDDPVSRLLKKYG 182 Query: 165 -SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAIL----------PGDIAEDDITAVLC 213 L ++ + EEL + L A++ E+ + Sbjct: 183 FEHLIGKSIEEILEELVLMPPSERPEGLIQELDALINGTSSKSTAESSKKEEEIAKDKIA 242 Query: 214 FVIEADQITFE-TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVD 272 + E V+ ++S V A + E +R+ V+K++ Sbjct: 243 TSMPRFTSQMEAQVDAGAQVSHGIVEPPKQAGAADTHSRTQPPKEKEEEKVLRIDVQKIE 302 Query: 273 QLINLVGELVITQSMLAQRSSELDPVNHG---------DLITSMGQLQRNARDLQESVMS 323 L+NLVGELV+ ++ L + S + DL + + + R DLQ +VM Sbjct: 303 VLMNLVGELVLDRNRLVKVVSTIMQSASENNEQIKGLDDLESVLSSIDRIVGDLQVAVMK 362 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 RM P++ +F ++PR+VRDLA L KQ+EL G TE+DKS++E++ +PL H++RNS+D Sbjct: 363 TRMQPVKRLFQKFPRVVRDLAKLLNKQIELVTEGEDTEMDKSVLEKLEEPLIHIIRNSVD 422 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HGIE PE+R GK G + L A +QG I + + DDG G++ +++ KA +G+ + Sbjct: 423 HGIESPEERELLGKPRNGIIKLKAYYQGDRIIMVIEDDGRGIDIDKVKRKALEKGIISQD 482 Query: 444 N---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 M++ EV LIF PGFSTA+QV++VSGRGVGMDVV + G ++I++++G GT Sbjct: 483 RLEKMTEKEVLSLIFHPGFSTADQVSEVSGRGVGMDVVMTTVMNFRGTIDIETQKGKGTK 542 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 + + PLT+ I+ + V + + F +P+ +V+E +Q A + ++ GE VL +R +P Sbjct: 543 VTMAFPLTVGIIRALMVSIGNRNFAIPIYSVLEIIQQENATITTVS-GEDVLILRESTIP 601 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 +V L V + +K G V+I Q G +R + V++L G ++VVK L + +V GI Sbjct: 602 LVNLADVLGIRNSKI----GYVIISQLGNQRVSFTVEELYGDEEIVVKPLGKIFGEVEGI 657 Query: 621 SAATILGDGSVALIVDVSALQAINREQRM 649 S ATI GDG+V LI+D++ + Sbjct: 658 SGATITGDGNVVLILDLAGILKRITHSAR 686 >UniRef50_Q6AJV5 Related to two-component system sensory/regulatory protein (Che family) n=2 Tax=Proteobacteria RepID=Q6AJV5_DESPS Length = 934 Score = 580 bits (1496), Expect = e-164, Method: Composition-based stats. Identities = 224/662 (33%), Positives = 345/662 (52%), Gaps = 49/662 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFG 58 M + + Q F +E+ E L+ +E LL ++ D E +N +FRAAHSIKGGAG G Sbjct: 2 MDFEDDEILQGFVEESLEHLSSIENDLLAIEEGGAAIDEELVNKVFRAAHSIKGGAGFMG 61 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + +QE +H EN+L R + +IIN+ L D +Q ++ S E D A+ Sbjct: 62 LTAIQELSHATENILGMVRNKSIIPTPEIINVLLIAADQLQTMIEDVANSNEADIANQ-- 119 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 AL +A ++K + S +V EP+ ++ ++ + + +E+E Sbjct: 120 -VSALNAIAEDSKNKQASPKPVPAV----EPEAPKAEIAEDAFVLFAEAAPVKTPPIEQE 174 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + A++ + E I V V Sbjct: 175 EIVPEAVLAETPAVIETPAVIETPVVETAIEVVSTVVQNI-------------------- 214 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 A K T + T++RV V +D L+ L GELV++++ L Q S + Sbjct: 215 -APQVPATKESKAEGKKTTAQSDTTLRVHVSLLDSLMTLAGELVLSRNQLLQTISTPE-- 271 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 ++ T ++ +LQE++M RM P+ VF ++PR+VRDL+ +LGK ++L +VG Sbjct: 272 -LHNVDTVGQRIDLITSELQEAIMLTRMQPIGNVFGKFPRVVRDLSKQLGKTIDLNIVGK 330 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 ELDK++IE I DPLTHLVRNS+DHGIELP +RL GK+ G +IL A H+ G +CIE+ Sbjct: 331 DVELDKTIIEAINDPLTHLVRNSVDHGIELPAERLKRGKSERGQIILKAFHEAGQVCIEI 390 Query: 419 TDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 +DDG GL+ E + A A S+GL E MS E LIF PGFSTA +VTDVSGRGVGM Sbjct: 391 SDDGKGLDEEVLTASAVSKGLISPEQAQLMSGKEKINLIFMPGFSTAAKVTDVSGRGVGM 450 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVVK N+ ++GG+VEI S+ G GTTI I LPLTLAI+ + +++E + +P + E L Sbjct: 451 DVVKTNLDQLGGNVEILSELGHGTTISIKLPLTLAIIPCQIITLSNERYAIPQVNLEELL 510 Query: 536 QPREADLH---PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE----------ATQGIV 582 + + + G V+ +RG LP++ L V + + + + Sbjct: 511 RISASQVKERIERVGDAEVVRLRGNLLPLIRLADVIGLGQQDKDQSSAALDTAGDSALNI 570 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V++ +G +Y L+VD L ++V+K L + ++ + ATI+GDG +ALI+D+ + Sbjct: 571 VVVSTGSMKYGLIVDSLQDSEEIVIKPLGRHLQQCKAYAGATIMGDGRIALILDLGNIAK 630 Query: 643 IN 644 + Sbjct: 631 MA 632 Score = 54.9 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 12/128 (9%) Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 E F +PLN V + + AD+ + G R ++ RG LP++++ V V + Sbjct: 669 AEKEQFAVPLNQVERIEKIKRADIEDV-GNHRTMQYRGGNLPLIQVDDV-AVVNPLADHD 726 Query: 579 QGIVVILQSGGRRYALL----VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 +V++ LL VD + +V V +++ K PGI ++I+ +G+ L+ Sbjct: 727 DLLVIVFNVALTTVGLLAVGPVDAI----EVFV-DIDDKTLKQPGIMGSSII-NGNTTLL 780 Query: 635 VDVSALQA 642 V++ L Sbjct: 781 VNIFELVK 788 >UniRef50_Q2T8Z1 Chemotaxis protein CheA n=8 Tax=Betaproteobacteria RepID=Q2T8Z1_BURTA Length = 747 Score = 580 bits (1495), Expect = e-164, Method: Composition-based stats. Identities = 303/739 (41%), Positives = 394/739 (53%), Gaps = 95/739 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F FF+EA+E L ME LL PDAE LNAIFRAAHSIKGGAG FGF Sbjct: 1 MSIDLSQFSDVFFEEAEEHLRAMETLLLACDVSNPDAEDLNAIFRAAHSIKGGAGAFGFV 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNT----------DIINLFLETKDIMQEQ--------- 101 L TH++E LLD R+ E+ L D++ + L + Sbjct: 61 ELTGVTHVLETLLDRIRKKELPLRAAMVDAFLRATDLLAVMLAAYRSAEALPEQSIAETK 120 Query: 102 --LDAYKQSQEPD--------------AASFDYICQALRQLALEAKGETPSAVTRLS--- 142 L+ Q + A D L + +A +T AVT Sbjct: 121 RSLERLSQGEGAHDGDAVTPVSEPVAAPAEHDGDAHPLAEDLDDAYRDTSPAVTPPPGCL 180 Query: 143 ---VVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAIL 199 + A + D S + G D L + + G + Sbjct: 181 HVRIAAGAPIDDAGVMSCLASYGRVLEHHPGSCDRPWRYLCETSRDAADIHGTLTFLIDP 240 Query: 200 PGDIAEDDITAVLCFVIEADQITF--------------ETVEVSPKISTPPVLKLAAEQA 245 + T E ++ E + + P + +A Sbjct: 241 DRLAIDQAATEEGAMPPEWEEEHDGYGFFVPVPPIDGGEAAREADARAEPAREEAGNARA 300 Query: 246 PTGRVEREKTTRSNES--------------------------------------TSIRVA 267 TGR E E + ++ +SIRV+ Sbjct: 301 ATGRPETEAIAPAGDAPAASADAPASASLSSPRSRPAGDAAGGDGAAKRNGAGGSSIRVS 360 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 VEKVDQL+NLVGELVITQSMLAQ ++ELD LI +GQL+RN+R+LQE+VMSIRM+ Sbjct: 361 VEKVDQLLNLVGELVITQSMLAQAATELDSNQRERLIGGIGQLERNSRELQEAVMSIRML 420 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ VF+R+PR+VRDLA +LGKQV+L ++G TELDK IE++ DP+ HLVRNS+DHGIE Sbjct: 421 PISAVFNRFPRVVRDLAMQLGKQVDLQMIGEHTELDKGFIEKLADPMMHLVRNSVDHGIE 480 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSD 447 P+ R+ GK + G L L A QG +I IEV DDG GL RERIL KA GL VSE M+D Sbjct: 481 APQARVRGGKPATGRLTLRASQQGSDIAIEVIDDGGGLKRERILEKARESGLPVSEAMTD 540 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 EV MLIF PGFSTA VTDVSGRGVGMDVV+RNIQ MGG +++ S G GT I I LPL Sbjct: 541 REVWMLIFEPGFSTAAAVTDVSGRGVGMDVVRRNIQAMGGRIDVDSTPGVGTAISIRLPL 600 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAILDGMSVR+ +I+PL + E++ P + D+ + G RV+ VRGEYLP+ L + Sbjct: 601 TLAILDGMSVRIGGSRYIVPLAFITEAVMPADTDIRTVQGSGRVVNVRGEYLPLRSLADL 660 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 F T+ + +IL ++ ALLVD+L+GQHQVV+KNLE+NYR+V G + ATI+G Sbjct: 661 FETGQDTTDG--SLALILACDSQKVALLVDELLGQHQVVIKNLETNYRRVRGAAGATIMG 718 Query: 628 DGSVALIVDVSALQAINRE 646 DG VALI+DV +L R Sbjct: 719 DGRVALILDVMSLVMSARN 737 >UniRef50_B1I5I0 CheA signal transduction histidine kinase n=5 Tax=Clostridia RepID=B1I5I0_DESAP Length = 701 Score = 579 bits (1494), Expect = e-163, Method: Composition-based stats. Identities = 229/685 (33%), Positives = 352/685 (51%), Gaps = 51/685 (7%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S+ Q F DE DE + + L L+ E + E + IFRAAH+IKG +G G+ + Sbjct: 4 SEEIQVFLDELDEKIEILNDGFLALEREGDNPETIQEIFRAAHTIKGSSGILGYDQMSAL 63 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH MENLL R G + ++++ LE D ++ D + + + + + LR+ Sbjct: 64 THEMENLLTLLREGRVHSTPRMVDVLLEALDTLKLLRDKVIGGTDREIDTGP-VMEKLRE 122 Query: 126 LALEAKGET--------------------PSAVTRLSVVAKSEPQDEQSRSQSPRRIILS 165 + E V+ ++ Q + Sbjct: 123 FCEQESAEVGDAGATGAGAAAGSEGAAGLVVTDAHWEVLREAVDQGYSAYRVRVDIDPGC 182 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADS----------LSAILPGDIAEDDITAVLCFV 215 ++K+ L+ + L + ++ + D + L + Sbjct: 183 QMKSVRAFLVFQTLEKAGVQVIQSEPPVEDLEQGNYGAGFELLVLSEEDADRLQGALSLI 242 Query: 216 IEADQITFETVEVSPKISTPPVLKLA--------AEQAPTGRVEREKTTRSNE--STSIR 265 E +T V V + + A AP RVE+ + +++ ++R Sbjct: 243 AEVSAVTVTPVAVLEEAGGDTITPAHTPGGTSTAAGPAPAARVEQFDSLNAHKKAIRTVR 302 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQLQRNARDLQES 320 + V+K+D L+NLVGELVI ++ L + + ++ + L L + DLQE Sbjct: 303 IDVQKLDSLMNLVGELVIERTRLERFADIMELKYRSEEMIDTLNEISSHLGQITSDLQEE 362 Query: 321 VMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRN 380 +M RM+P+ VF+R+PR+VRDLA KLGK+V L + G TELD+++IE I DPL HL+RN Sbjct: 363 IMMARMLPIAQVFNRFPRMVRDLAQKLGKEVNLVIEGRDTELDRNVIEIISDPLVHLIRN 422 Query: 381 SLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 ++DHG+E+PE+RL GK G L L A HQ +I I V DDG GL+ +R+ A+A L Sbjct: 423 AVDHGLEMPEERLGFGKPRAGTLTLRAFHQENHIVIIVEDDGRGLDPDRLRARAREMQLL 482 Query: 441 VSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 E ++D + LIF GFSTA V+D+SGRGVGMDVVK I+++ G VE++S G Sbjct: 483 DEETLARLTDQDALNLIFQAGFSTAADVSDISGRGVGMDVVKSQIEQINGLVEMRSTPGQ 542 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + I LPLTLAI+ + V + + V+ PL V+E++Q A++ + V+ VRGE Sbjct: 543 GTAVTIKLPLTLAIIRALMVELGNYVYAFPLANVVETMQIDPAEIRMIRD-AEVVVVRGE 601 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 LP+V L ++F E + VVI+ +G R ++VD+L+G+ ++V+K+L ++ Sbjct: 602 VLPLVRLRRLFRQRETDPE-GRLYVVIIGTGQDRVGVVVDRLVGEQEIVIKSLGDLLGRI 660 Query: 618 PGISAATILGDGSVALIVDVSALQA 642 PGIS ATILGDG VALIVDV AL A Sbjct: 661 PGISGATILGDGKVALIVDVRALLA 685 >UniRef50_B7HLT1 Chemotaxis protein CheA n=71 Tax=Bacillales RepID=B7HLT1_BACC7 Length = 670 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 208/673 (30%), Positives = 357/673 (53%), Gaps = 45/673 (6%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D FF+E++E L + +++L+L+ D + + IFR+AH+ KG + + F+ + + T Sbjct: 4 DLLNIFFEESEEHLQSLNENVLILEQNPTDMDVVGEIFRSAHTFKGMSASMEFTEMADLT 63 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H MEN+LDE R G + ++ DII++ E D +++ + +Q + Q L L Sbjct: 64 HKMENVLDEIRHGNIVVHADIIDVIFECIDNLEKMVADVQQGGMGNIDVVST-KQKLEAL 122 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 ET + + + ++ IL ++A + +G + Sbjct: 123 LN-GNVETSMEHVEQESINNDDAVSHEVHITVEQQAILKAVRAIMCIEALQNIGDIQKTV 181 Query: 187 DVVKGAD------SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI-------- 232 ++ + + + D +E+++ V+ V E +++ + E ++ Sbjct: 182 PSIEEIEADAFGFEFTVFMNTDRSEEEVKQVVLHVSEIEKVVVKQGESLQEVDSMVAMQE 241 Query: 233 ----------------STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 P A + + E+ SIRV +EK+++L+N Sbjct: 242 TTRVEEMIQSSVVAQVEAPIETAKQPASATPTKSTAKTKNAKGENRSIRVQLEKIERLMN 301 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 + E VI + + + + + + +LI + +L ++D+Q ++++RM+P+E VF+R+ Sbjct: 302 MFEESVIERGRIDELAQ---AIQNKELIEHLNRLGDISKDIQNVLLNMRMVPIETVFNRF 358 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 PR+VR LA LGK+++L + G TE+DK +I+ I DPL HL+RN++DHGIE EKR AG Sbjct: 359 PRMVRMLAKDLGKKIDLQITGEDTEVDKIVIDEIGDPLVHLIRNAIDHGIETVEKRRDAG 418 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAML 453 KN G + L A H G ++ I++TDDG G+++ ++L KA G+ ++D EV L Sbjct: 419 KNETGTIKLEAFHSGNHVVIQITDDGNGIHKGKVLEKAIKNGVVTESEANKLTDREVFDL 478 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFSTAE V+D+SGRGVG+DVVK I +GGH+ I S++G G+T RI LPLTL+I+ Sbjct: 479 IFQPGFSTAEVVSDLSGRGVGLDVVKHTIHSLGGHLIIDSEEGKGSTFRIELPLTLSIIQ 538 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 M V+ D+ + LPL ++E+++ + D+ L G+ VL R + + + L VF Sbjct: 539 SMLVQTNDKRYALPLGNIVEAIRIKREDIQTLQ-GKDVLNYRDQIIEVKHLSTVFGEKSV 597 Query: 574 KT-----EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP-GISAATILG 627 E+ V+I+++ R Y L+V+ +IGQ ++V+K+L + + S ATILG Sbjct: 598 DEAFESYESQMVPVLIIRNTHRSYGLIVNTIIGQREIVLKSLGDFFAESSNYFSGATILG 657 Query: 628 DGSVALIVDVSAL 640 DG V LI++ L Sbjct: 658 DGRVVLILNPEGL 670 >UniRef50_Q67P71 Two-component sensor histidine kinase involved in chemotaxis, CheA n=1 Tax=Symbiobacterium thermophilum RepID=Q67P71_SYMTH Length = 710 Score = 578 bits (1491), Expect = e-163, Method: Composition-based stats. Identities = 230/697 (32%), Positives = 364/697 (52%), Gaps = 57/697 (8%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEA--PDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ + F DEA+ELL ME +L L+ +A PD E + IFRAAH++KG + T G + Sbjct: 9 AEDIRVFLDEAEELLQTMEAGILRLESDAGDPDPEVIQDIFRAAHTLKGSSATLGHQRMA 68 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E TH MEN+LD R+G+ + T +++ D ++ D EP + D + + L Sbjct: 69 ELTHAMENVLDRLRKGKASVTTPLVDTLFHCLDALKLFKDEIATG-EPAQVNTDELMREL 127 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQ-----------------SRSQSPRRIILSR 166 L + P+ + + P Q +R + + Sbjct: 128 AALEGASAPAAPAQAAPSADGVEFPPLTAQQQAKVDEARTKGLNVYQARLEIAPDAAMPA 187 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 ++A + L ++G + + ++ + L V + + E Sbjct: 188 VRAFQALLAVGDIGEIVLSVPTQEQVEN-DQVGSDMKLLFVTRESLQKVQDVLREVPEMA 246 Query: 227 EVSPKISTPPVLKLAAEQAPTGRVEREKT-------------------------TRSNES 261 + P + P G V T Sbjct: 247 VRTLAAYEPVSAAAPSGPTPAGEVAAAAMAPAAPKAGPVPAGDNGAGNGGGALRTPRGGM 306 Query: 262 TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----LITSMGQLQRNARD 316 ++RV VE +D L+N VGELVI ++ L Q S L+ GD + +++ QL R + Sbjct: 307 RTVRVDVEVLDNLMNTVGELVIERTRLQQVLSRLEVEREGDELSQTMSSALAQLGRLTGN 366 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE + RM+P+E +F ++PR+VRD+A K GK++ + G TELD+S+IE I DPL H Sbjct: 367 LQEEIQRARMIPVENLFRKFPRMVRDIAQKFGKEINFIMRGEETELDRSVIEEIGDPLMH 426 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 L+RN++DHGIE PE R+AAGK + G +IL A H+ +I I V DDG G++ E+I A A Sbjct: 427 LLRNAVDHGIEPPEVRVAAGKPAAGTVILEAFHEENHIIISVRDDGRGVDPEKIRASAVR 486 Query: 437 QGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 +G+ E +SD E LI++PGFSTA++V+DVSGRGVG+DVV++NI+++ G VEI+S Sbjct: 487 KGILSEEAARRLSDPEAINLIWSPGFSTADKVSDVSGRGVGLDVVQKNIERINGSVEIRS 546 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G GT R+ LPLTLAI+ + V + ++ +PL +V+E+ + +++ + E V++ Sbjct: 547 TVGQGTEFRVKLPLTLAIIRALQVELLGTIYCIPLGSVVETDRIPVSEIQTVRQREVVVK 606 Query: 554 VRGEYLPIVELWKVFNVAGAK--TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 RGE +P++ L + F + + E + VVI+ GR+ L+VD LIG+ VV+K L Sbjct: 607 -RGEVIPLLRLAEAFELQRPEGAEEPDEIFVVIVAVMGRQIGLVVDSLIGEGDVVIKPLG 665 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 ++PGIS ATI+GDG VA+I+DVS+L +++ Sbjct: 666 RFIGEIPGISGATIMGDGDVAIILDVSSLVNSVQDEA 702 >UniRef50_B5JQF9 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=2 Tax=Verrucomicrobia RepID=B5JQF9_9BACT Length = 921 Score = 577 bits (1488), Expect = e-163, Method: Composition-based stats. Identities = 222/653 (33%), Positives = 357/653 (54%), Gaps = 73/653 (11%) Query: 3 MDI-----SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF 57 MD+ + Q F EA++ L +E +L L+ + + +N++FR+ H+IKG AG Sbjct: 331 MDLNMEENEELLQEFHTEANDHLGQIETAVLDLEKDVTSRDAINSMFRSFHTIKGVAGFL 390 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD 117 + H +E+L+D R ++ + T II+L L KD + +Q+ + Sbjct: 391 NLVPVNRLAHEVESLMDLVRNDKLGVFTGIIDLVLAAKDTITKQI--------------E 436 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 I +AL + G+TP+ V + Sbjct: 437 QITEAL------SNGKTPTEVIK------------------------------------- 453 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + L + G+ + T +E + E PV Sbjct: 454 -VSELMARARWAMEGPEVYGRKTGESSAVIATPEAEAPVELESDAPEASTT----PAAPV 508 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 ++ A E + R+ E+ +IRV K+D L+++VGELVI QS L + S + + Sbjct: 509 VQSAEEIEKDAKNAAAAKRRAAENATIRVNTIKLDNLMDMVGELVIVQSQLLESSRQTEG 568 Query: 298 ----VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 L +M QL R ++LQ + M++RM+P++ F + R++RD+ K GK+V Sbjct: 569 NGTAGGDSVLQRNMSQLTRITKELQHTSMALRMIPVKPTFQKMGRIIRDIGAKCGKKVRF 628 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE-LPEKRLAAGKNSVGNLILSAEHQGG 412 G TELD++++E I DPL H+VRN+LDHG+E +R AAGK+ G + L A HQG Sbjct: 629 ETFGEDTELDRNVVEEIGDPLVHMVRNALDHGLEADAAERQAAGKDETGYIALKAYHQGS 688 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 NI IE++DDG G++ +R+L KA S G+ + +S++E+ LIFAPGFSTAEQ+TD+SGR Sbjct: 689 NIVIELSDDGRGIDPDRVLKKAISNGIVSENDQLSNEEIYKLIFAPGFSTAEQITDISGR 748 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVV++NI+K+ G +EI+S+ G G+T RILLPLT+AI+DG+ VRV ++ FILP +V Sbjct: 749 GVGMDVVRKNIEKLRGKIEIESELGKGSTFRILLPLTMAIVDGLVVRVGEDRFILPTTSV 808 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 +L+P E L + G + +L +RG+ +P+ L + F + GA +E VV++++ G+ Sbjct: 809 KVALRPDENVLAKVQGNQEILNIRGQVIPLFRLHQHFAIPGAISEPKDATVVVVETAGKP 868 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 LLVD ++ + +VV+K+L + +PG+S ILGDG++ALI+D ++L ++ Sbjct: 869 CGLLVDDMVSKQEVVIKSLGGMMQGIPGVSGGAILGDGTIALILDPASLISVA 921 >UniRef50_A6C6G6 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C6G6_9PLAN Length = 895 Score = 577 bits (1487), Expect = e-163, Method: Composition-based stats. Identities = 209/662 (31%), Positives = 322/662 (48%), Gaps = 58/662 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F E+ E L ++ ++ L+ + +AE + +IFR H+IKG G G + L Sbjct: 1 MDDILQEFLAESWENLGQLDSEIVELEKDPQNAELIASIFRTIHTIKGTCGFLGLTNLGA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R ++++ I+L LE D ++E L + + E + L Sbjct: 61 VAHSAENVLGKMRERMLEVSPGAISLVLEAIDRIKELLQGLEATGEEPKTDHSTLTLMLD 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +LA A S + S ++ S L ++ E T Sbjct: 121 ELANLATAPLESPPQQPPSAPVSGQVEDISVENQVEDKPLGGPSPTDIADSNESEPAALT 180 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + A+S + P Sbjct: 181 DSHPEVLAESADPLTPA------------------------------------------A 198 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 T + S SIRV V VD L+NLVGELV+T++ L Q + + + Sbjct: 199 GGTEEGAVRSSKVSVADLSIRVNVNVVDSLMNLVGELVLTRNQLLQLARGDEESKYA--- 255 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + L R DLQE VM RM P+ +++ PRLVRDL+ K +EL + G+ TELD+ Sbjct: 256 APITHLNRVTTDLQEGVMKTRMQPIGNAWNKLPRLVRDLSQVTNKHIELVMTGAETELDR 315 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ I DPLTH+VRNS DHGIE E R AAGK G + L+A H+GG++ IE+ DDGAG Sbjct: 316 TVLDAIKDPLTHMVRNSADHGIESSEVRKAAGKAESGTIHLNAYHEGGHVIIEIQDDGAG 375 Query: 425 LNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 ++RER+L KA SQGL + +++D V +IF GFSTAEQV+ +SGRGVGMDVV+ Sbjct: 376 ISRERVLKKAISQGLIKEVDAPHVTDSHVFSMIFQAGFSTAEQVSSISGRGVGMDVVRTQ 435 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+K+GG V++ SK G GTT+RI +PLTLAI+ + + + F +P V+E ++ D Sbjct: 436 IEKIGGTVDLNSKMGKGTTVRIKIPLTLAIVSALVLESGSQPFAIPQLGVVELVRLSAED 495 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLV 596 + ++V +R LP+V L +V + + +V++Q G ++ L+V Sbjct: 496 CKKIETIHDKKVFRLRDRLLPLVHLNEVLQLEEDTPKDDDLQDTNIVVVQVGEDQFGLIV 555 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA-----INREQRMAN 651 ++ ++VVK + + + TILGDG V +I+DV + Q +A Sbjct: 556 SRIFDTEEIVVKPVGRLLKNIGLYQGTTILGDGRVVMILDVGGIFNQCGGSSAHSQSVAE 615 Query: 652 TA 653 A Sbjct: 616 EA 617 Score = 53.7 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 12/121 (9%) Query: 511 ILDGMSVRVADE-VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL-WKVF 568 + + V D +PL+ V + + L G +V++ R LP++ + F Sbjct: 625 TISMLLFGVKDNVTMAVPLSLVARLEEFPLESIE-LNGDRKVVQYRDNLLPLLSIEGAGF 683 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKVPGISAATIL 626 V++ R L+V+++ Q+V++ PG+ I+ Sbjct: 684 GGGEPV---DPQPVIVFSENNRSMGLMVNEIKDIIDEQLVIR----MQSDRPGVLGTAII 736 Query: 627 G 627 G Sbjct: 737 G 737 >UniRef50_B8FJT3 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJT3_DESAA Length = 757 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 214/653 (32%), Positives = 359/653 (54%), Gaps = 43/653 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + ++F E+ E L+ +E H+L L+ E + + ++AIFR H+IKG +G + + Sbjct: 145 DRELIESFIQESMEHLSTIEIHVLELEKEPDNLQLVDAIFRPFHTIKGVSGFLNLREINK 204 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD--YICQA 122 H +E +LD+AR ++ ++ ++++ L+ D++ +D + + + Sbjct: 205 LAHQIETVLDDARSKKISVSPSLVDIVLDGVDLVTRLIDDVDDRLKTGRLEPEYLELGPF 264 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L +L +G + + E ++ +L + + + LEE L Sbjct: 265 LERLHTVGEGV-------NAPLEDGEEENIPEGDGLDVGELLVKKGVVQAEDLEEALAKQ 317 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + K + A D A+ + Sbjct: 318 ASGESKGKKIGEILIEGKKAKARDVAQALRKQKADR------------------------ 353 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + K N + I+V K+D ++++VGELVI +++L QR + + D Sbjct: 354 --------QPAKAAGGNGAGFIKVDTLKLDNMVDMVGELVINEAVLKQRLA-MAAGKDRD 404 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L + QL R ++Q MS+RM+PM+ F + RLVRDLA K GK+V L ++G TE+ Sbjct: 405 LAGDLAQLGRITSEIQRIAMSMRMIPMKNTFQKMIRLVRDLASKAGKKVNLEMMGEDTEI 464 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++ I DPL H+VRNS DHGIE+P+ RLAAGK G +IL+A H+GGN+ IEVTDDG Sbjct: 465 DRNVVDMIYDPLVHMVRNSADHGIEIPKDRLAAGKPEAGTIILNAYHKGGNMIIEVTDDG 524 Query: 423 AGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GL++E + AKA +GL +E MSD ++ LIF PGFSTA++VTDVSGRGVGMDVVK Sbjct: 525 RGLDKEALTAKAMEKGLIQSAEGMSDQDIFGLIFHPGFSTAKKVTDVSGRGVGMDVVKGV 584 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 + K+ G VE+ S++G GT+I + LPLTLA++DG+ VR ++ +++P +V+ES++P D Sbjct: 585 LDKLRGKVEVMSRKGQGTSILLKLPLTLAVIDGIIVRAGEQSYVIPTISVLESIRPNRED 644 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 H + ++++RG P++ L ++F+ + IVVI +S G++ +LVD+++G Sbjct: 645 CHTVVNKGEMIKIRGSLYPLIRLHELFDFPPNTRDPWDAIVVIAESEGKQKCILVDEILG 704 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + +VV+K+L + + V G++ IL +G V +I+DV+ L ++ Q TA+ Sbjct: 705 KQEVVIKSLSAMLKNVVGLAGGAILANGRVGMILDVAGLFSLVESQAEYLTAS 757 >UniRef50_Q10WZ9 CheA signal transduction histidine kinases n=3 Tax=Oscillatoriales RepID=Q10WZ9_TRIEI Length = 801 Score = 576 bits (1486), Expect = e-163, Method: Composition-based stats. Identities = 192/671 (28%), Positives = 324/671 (48%), Gaps = 76/671 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M M+I + Q F ++ E + +E L+ L+ + + E + I+R+ H++KG +G G Sbjct: 1 MKMEIDEDIQAFLIDSYETINKLESDLVALEKHSINPELIQCIYRSLHTLKGNSGFLGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 LQ H ENLL + G + + +I+N+ L+ D +++ L + + + +++ + Sbjct: 61 TLQSLAHAGENLLACLQDGRIIITPEIMNVLLQAIDGIKQILYCLETTGKQGDYNYNSLL 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L + + E L ++ S ++ A + E Sbjct: 121 KNLASITSSEQTEKAQTEVSLDYEDSWPQLEKVDNSSQNLSTTDAQQTAFVEEQALPEKT 180 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 T + LS L DI ++TA + Sbjct: 181 EQLLNTSEISSTLPLSGNLSEDILTTNLTASISG-------------------------- 214 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 IRV V+ ++QL+NLVGELV+ ++ + ++ Sbjct: 215 ---------------------NYIRVDVQLLNQLMNLVGELVLCRNQVLVFNNRQTDSVF 253 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 GD +L +LQE +M + P+ +++++PR+VRDL+ LGK++ L + G T Sbjct: 254 GDTSQ---RLDLITTELQEGLMKTLLQPIRKIWNKFPRVVRDLSLSLGKEINLEMEGEET 310 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDK+LIE I DPLTHLVRN +DHGIE P+ R++ GK +G L L A H+ G + IE+ D Sbjct: 311 ELDKTLIEAISDPLTHLVRNCVDHGIEHPDIRISKGKPPIGRLWLRAFHESGYVNIEIGD 370 Query: 421 DGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ +RI AKA + + E ++++E LIF PGFSTA ++T++SGRG+GMDV Sbjct: 371 DGRGIDIKRIKAKALQRHIITHEQASSLTENEAYNLIFIPGFSTAPKITNISGRGIGMDV 430 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ NI+K+ G + I S+ G GTT ++ +PLTLAI+ + V + + +P +++E ++ Sbjct: 431 VRNNIEKISGTINISSQLGQGTTFKLKIPLTLAIIPTLIVTTNGDRYAIPQVSLLELVRL 490 Query: 538 READLH---PLAGGERVLEVRGEYLPIVELWKVFNVA--------------------GAK 574 D + G + +RG LP+V L V + G Sbjct: 491 EGKDAKKKVEMVHGAPIYRLRGNLLPLVYLDNVLQLEANKSHRYPLATPWLEGVSLKGQS 550 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 +V++Q+ + + L+VD + ++VVK L +K+ + ATI+GDG VALI Sbjct: 551 DNLDILNIVVVQAAHQSFGLVVDAINDTQEIVVKPLGRQLKKISCFAGATIMGDGKVALI 610 Query: 635 VDVSALQAINR 645 +D+ L Sbjct: 611 LDIQGLAQTVH 621 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 55/136 (40%), Gaps = 19/136 (13%) Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 A + + V + + + + G ++V++ R + LP++ L + F +++ Sbjct: 655 AHRRMAIARSKVARLEEFPISSVEHV-GNQKVIQYREKILPLIYLSEFFATNQLSSQSQN 713 Query: 580 GI-------VVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKV-PGI-SAATILGD 628 VV++ +V+Q++ + ++ +K Y + GI AA I Sbjct: 714 VPQLLTIQVVVVVIDEDNLVGFVVEQIMDIVEQEIKIK-----YAAIEKGIDYAAVIQE- 767 Query: 629 GSVALIVDVSALQAIN 644 V I++V + + Sbjct: 768 -RVTEILNVEEIVKVA 782 >UniRef50_Q2RX20 CheA Signal Transduction Histidine Kinases (STHK) n=40 Tax=Bacteria RepID=Q2RX20_RHORT Length = 942 Score = 576 bits (1485), Expect = e-162, Method: Composition-based stats. Identities = 212/667 (31%), Positives = 324/667 (48%), Gaps = 31/667 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D F E E +A ++ L+ L+ D L+ IFR H+IKG G G L+ Sbjct: 1 MDDLLSEFLTETSESIATLDVELVNLERNPNDKGILSNIFRLVHTIKGTCGFLGLPRLES 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R G++++ + + L T D ++E L + ++ + L Sbjct: 61 LAHAGENVLGKFRDGDLEVTPAAVTVILHTIDRIKEILGHLEANEVEPEGDDKDLKAHLN 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A + + + A S P + ++ +A Sbjct: 121 AFAEGKQPSVAAMAPAPARAAGSGPAISEGGYPVAAELLAEVSEAV-----------AKG 169 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + AE AV V E V P V Sbjct: 170 KRAATEAELAAELAAELAAAEKAEQAVAAPVPEVIPEVKAATPVVQPAKPPAVTAAHDTN 229 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P G E+ S S SIRV VE ++ L+ LV ELV+T++ L Q D + + Sbjct: 230 GPNGGGGGEQKEGSVASQSIRVNVELLENLMTLVSELVLTRNQLLQMVRGSDD---SEFV 286 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L DLQE VM RM P+ +++ PR+VRDL+ ++ K+++L + G+ TELD+ Sbjct: 287 APLQRLSHITTDLQEGVMKTRMQPIGNAWAKLPRIVRDLSIEMHKKIDLQMYGADTELDR 346 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++E I DPLTH+VRNS DHG+E P++R AAGK G + L+A H+GG+I IE++DDG G Sbjct: 347 QVLEMIKDPLTHMVRNSGDHGLEFPDERAAAGKPETGVIKLNAYHEGGHIIIEISDDGRG 406 Query: 425 LNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 LN ERI AKA S GL ENM+D ++A IF G STAE+VT VSGRGVGMDVVK N Sbjct: 407 LNLERIRAKALSNGLATEAELENMTDQQIAQYIFRAGLSTAEKVTAVSGRGVGMDVVKTN 466 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+K+GG VE+++ G G+ I +PLTLAI+ + V + E F +P +V+E ++ Sbjct: 467 IEKIGGTVELKTWPGKGSRFVIKIPLTLAIVSALIVEASGERFAIPQISVLELVRVTANS 526 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEA------------TQGIVVILQS 587 + VL +R +P+V L + + E + +V+ Q Sbjct: 527 ETTIEQINTAPVLRLRDRLMPLVSLSALLRLDDGDDEELGKTADATAGRRDETFIVVSQV 586 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G + ++VD++ ++VVK + R V S TILGDGSV +I+D + + + E Sbjct: 587 GTYTFGIIVDRVFDTEEIVVKPVAPILRHVSMFSGNTILGDGSVIMILDPNGIASATGEV 646 Query: 648 RMANTAA 654 M + + Sbjct: 647 TMGSASG 653 Score = 56.0 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 54/132 (40%), Gaps = 19/132 (14%) Query: 512 LDGMSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 + R + +PL V + + + G+ V++ RG+ +P+V + F + Sbjct: 669 TSLLVFRAGGKDLKAVPLALVARLEEIETDKIEH-SFGKPVVQYRGQLMPLVGIHDEFTL 727 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR-----KVPGISAATI 625 AG + V++ R L+VD+++ +V E + + + G+ + Sbjct: 728 AGE----GRQPVLVFSDRDRTMGLVVDEIV---DIV----EDHLKVELRADLRGVVGTAV 776 Query: 626 LGDGSVALIVDV 637 + +G I+D Sbjct: 777 V-NGKATDIIDT 787 >UniRef50_B8J0K8 CheA signal transduction histidine kinase n=6 Tax=Desulfovibrio RepID=B8J0K8_DESDA Length = 1031 Score = 576 bits (1484), Expect = e-162, Method: Composition-based stats. Identities = 193/657 (29%), Positives = 316/657 (48%), Gaps = 51/657 (7%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F + + + L L+ + + ++A++R +IK G G + ++ Sbjct: 401 EAFRVTVQQQIEIIHAALETLKKDGSHKDSIDALYRCLLAIKNACGFMGLADIKTYAERT 460 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 ++D+ R + + +++L + I+Q+ + + Sbjct: 461 AGIVDQGRSSGIDFDL-MVDLLDQEVSIIQDMVRQALNDGKV------------------ 501 Query: 130 AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVV 189 P D S + P A D E + Sbjct: 502 -------------------PTDASSATTKPASDEDVGSAAIIADKPEATPTTTSAPIAPA 542 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 + P D TA + PK + P A A Sbjct: 543 PAQAEVQGAAPADAKTTVPTATAVPASGEQSTEAASRPAQPKPAPPMTQAAPARAAAPQA 602 Query: 250 VEREKTTRSNEST-SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG------- 301 ++S+ +IRV E++D L+NL+GEL+I ++ + L+ Sbjct: 603 KGAASAAEGHKSSSTIRVDHERLDHLMNLIGELIINRNRYTLIARSLEDSGDNVDISHVA 662 Query: 302 -DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 L + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L + G T Sbjct: 663 QSLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVMEGEET 722 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELDKS++E I DPL HL+RNS+DHGIE + RLAAGK + G + L A H+G ++ IE+ D Sbjct: 723 ELDKSVVEVIGDPLVHLIRNSVDHGIESEDVRLAAGKPAKGKVTLRAFHKGNSVAIEIED 782 Query: 421 DGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DG G++ ++ A +G+ E + D E LIFAPGFS+A+Q+TD+SGRGVGMDV Sbjct: 783 DGKGIDPAKMRETAIRKGVITPEEAAQLDDREAVELIFAPGFSSADQITDISGRGVGMDV 842 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ NI+ + G V S+ G GT + LPLTLAI+D + V V+ +++ +PL+AV E+ + Sbjct: 843 VRTNIKNLKGSVSTYSEVGKGTRFTLSLPLTLAIIDALMVNVSGQMYAIPLDAVSETTKI 902 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 L + G + V +RGE L +VE+ ++ + VV++ RR L+VD Sbjct: 903 EAHRLTDVKGRKAV-TLRGEVLGVVEMAEMLGLPRTDPLPDVLSVVVIHDNDRRLGLVVD 961 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +L+ + ++V+K L + + GIS ATI+GDGSV LI+D + + + ++ A Sbjct: 962 RLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILDPHEIYLMATSKAVSVVPA 1018 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 86/218 (39%), Gaps = 7/218 (3%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPELFADFIAEAKEHLETIEPNLLELEKAPGNLALLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + + H EN+LDE R+G M + +I+++ L + D +++ +D + S + Sbjct: 61 LNRINQLAHKSENILDELRKGSMVVTPEIMDVILASTDALRQMIDNLESSNSEGEVETGH 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I + + ++ + + S AG++ + Sbjct: 121 IMAQIDAIMAGESPVPAQPGQAAPASPVFPAEEVTPAAAAGLSEAESLSAAGDMPDVP-- 178 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI 216 L + + DS + G ++ + + Sbjct: 179 ---LFGPSSATQSQDSATVNADGMSGKEWVATLPALPS 213 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 54/288 (18%), Positives = 107/288 (37%), Gaps = 15/288 (5%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEA-PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DE+ E++ ++ LL L+ E +N +FR H++KG +G G+S L TH Sbjct: 224 LKDFIDESIEIIENLTNGLLELEENPTGQGELVNDLFRFFHNMKGNSGIIGYSDLNALTH 283 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALRQL 126 E LL+ R+G++ ++I+L L D+M+ + S + D + + L+ Sbjct: 284 EAETLLNNVRQGKITPTHELIDLLLLVVDVMEALVHNIDVASGQASPFETDSVVKQLQNA 343 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 P+ + Q R Q+ A +V E+ T + Sbjct: 344 LAGGPIALPAELLTA-----------QGREQADSGNPEHAHDAADVADAPVEVVTPTIIP 392 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 +G D+ + + + I A L + + + + A Sbjct: 393 VGSEGDDAEAFRVTVQQQIEIIHAALETLKKDGSHKDSIDALYRCLLAIKNACGFMGLAD 452 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 ++ S + + + L++ E+ I Q M+ Q ++ Sbjct: 453 IKTYAERTAGIVDQGRSSGIDFDLMVDLLDQ--EVSIIQDMVRQALND 498 >UniRef50_Q5WEU3 Chemotaxis protein histidine kinase CheA n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEU3_BACSK Length = 648 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 211/644 (32%), Positives = 335/644 (52%), Gaps = 17/644 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D+ F +EADE L M LL L+ + D + + IFR+AH++KG + T GF+ + E T Sbjct: 5 DYIGMFLEEADEHLQAMNAKLLQLEQDPFDKDAIAEIFRSAHTLKGMSATMGFNAMAELT 64 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ---EPDAASFDYICQAL 123 H +ENLLD R G ++ I+L + + ++ + + + E D Q L Sbjct: 65 HSLENLLDAMRDGNIEAGAGEIDLLFDAVEYLEASVSHVRNTGGELEEANGLRDTFAQLL 124 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRS----QSPRRIILSRLKAGEVDLLEEEL 179 Q A S T V QD + L ++A V + Sbjct: 125 GQERKSANEVAASLDTDTHAVMDQAVQDGVPVQVIHVEIDDNAALKGVRAFMVASEAAQF 184 Query: 180 GHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 G L + + ++ A + + +E + + K Sbjct: 185 GELIHTEPSREELEEGKFASGFTLTAATTLPDSDIKKRLEGISEVKQVTVTAYKPQKKAD 244 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 + + +IRV VEK+D L+ L ELV+ + L ++ L Sbjct: 245 KAKSQTAKAPSEKGAGAKGEQAQQKTIRVNVEKLDSLMYLFEELVVEKGRLELVANSLQT 304 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 +L ++ R LQE ++S+R+MP+E VFSR+PR+VR ++ ++GKQ+ + G Sbjct: 305 ---DELTNVFEKVSRITSHLQEVMLSVRLMPLEPVFSRFPRMVRKVSKEIGKQIRFVIEG 361 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 +TELD+++I+ I DPL HL+RNS+DHGIE P R +GKN G ++L A + G ++ IE Sbjct: 362 ETTELDRAIIDEIGDPLLHLLRNSIDHGIEEPAVRQKSGKNPEGLIVLRAFYSGSHVVIE 421 Query: 418 VTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 + DDGAG+ +E++L KA L +E M+ DE+ L+FAPGFSTA +VTD+SGRGVG Sbjct: 422 IEDDGAGIKQEKVLKKAIENELITAAEAEKMASDEINNLLFAPGFSTANEVTDLSGRGVG 481 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 +DVVK MGG + + SK+G GT I LPLT++I+D M V + +++ P+ + E+ Sbjct: 482 LDVVKSTFSAMGGEIAVSSKEGEGTRFSISLPLTVSIIDAMMVELGSDIYAFPIANIAET 541 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 ++++L A G+ + E RG+ +P+V L + F + K + + V++L A+ Sbjct: 542 AYVQKSELKQ-ADGQSLFEWRGQLVPLVSLNEQFGLPE-KEDEQELAVLMLYRNQTLMAV 599 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 VD+ IG+ +VV+K L S + GIS TILGDG++ALIVD++ Sbjct: 600 KVDRFIGKQEVVLKPLGSLLKGTKGISGGTILGDGTIALIVDIA 643 >UniRef50_B0PA26 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PA26_9FIRM Length = 690 Score = 575 bits (1483), Expect = e-162, Method: Composition-based stats. Identities = 202/692 (29%), Positives = 340/692 (49%), Gaps = 46/692 (6%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTF 57 M++D + F E LL +++ LL + + +N IFR H+IKG A Sbjct: 1 MAIDPSMEPMLDVFIYETTTLLDQLDEILLDAEKSKSFSEDNINEIFRIMHTIKGSAAMM 60 Query: 58 GFSVLQETTHLMENLLDEARRGEM---QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 + + H +E++ R ++ I +L + D ++++++ + + E + Sbjct: 61 DLNGISTLAHSVEDVFFIIREDPARMASISEAIFDLVFQASDFLKDEVECVQNTHEANKD 120 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ------------SPRRI 162 I L ++A KGE P+ A + + + Sbjct: 121 PSA-IIAELEKMAAIMKGEAPAPTAAGVPAASAAAEAAPAAQAPAAEQAGEICRIRIFFD 179 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ-- 220 +++ +L +L L + A +I ++ + ++ + Sbjct: 180 DDCQMENIRAFMLVSQLKDLCADLTTIPANPENDASCCTEIIKNGFEMIFKPLVPMSEIF 239 Query: 221 -----------------ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS 263 + P + + + + + Sbjct: 240 QVIESSVNVKNYTVLHDEPEPQSPAPAAAAKPAAAPAKPAVSASSAPKPSDALPKTKQSL 299 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 + V K+DQL++LVGELV T+SM+ + +L + + S +L + +LQ+ VMS Sbjct: 300 VSVNQAKLDQLMDLVGELVTTESMVV-SNPDLKGLRLDNFNKSTRELHKLTDELQDVVMS 358 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 IRM+P+ VF + R+VRD++ KL KQVEL G TE+DK++ E I DP H++RNS+D Sbjct: 359 IRMVPLSGVFQKMNRIVRDMSKKLDKQVELVTEGGDTEVDKTINEAIGDPFMHMIRNSMD 418 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-- 441 HGIE E+R A GK +G + + A++ G I I + DDGAGLN E +L KA GL Sbjct: 419 HGIEPIEERRAKGKPDIGRITMIAKNIGSEIVITIADDGAGLNPEVLLRKARENGLLTKP 478 Query: 442 SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 ++ E+ LI PGFST ++VT+ SGRGVGMDVV++NI+K+GG + I S++ GTT Sbjct: 479 ESEYTEKEIFGLIMLPGFSTNKEVTEFSGRGVGMDVVRKNIEKVGGTLSIDSERDKGTTF 538 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP-READLHPLAGGERVLEVRGEYLP 560 I +PLTLAI+DGM + + ++ LP+ ++ +S + + + G ++ +RGE P Sbjct: 539 IIKIPLTLAIVDGMELEIGSTIYTLPIASITQSFKIYDNSQILHNTDGTEMIMLRGECFP 598 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP-- 618 ++ L ++F+V TE GIV+++++G L D+L+G+ QVVVK + K Sbjct: 599 LIRLHRLFDVETQITELGDGIVILIENGTSAACLFADKLLGEQQVVVKPFPTFLNKYAIK 658 Query: 619 --GISAATILGDGSVALIVDVSALQAINREQR 648 G+S TILGDGS++LI+D +AL +N+E+R Sbjct: 659 QIGLSGCTILGDGSISLILDANALLNLNKERR 690 >UniRef50_A3CU26 CheA signal transduction histidine kinases n=3 Tax=Methanomicrobiales RepID=A3CU26_METMJ Length = 660 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 202/669 (30%), Positives = 339/669 (50%), Gaps = 38/669 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D + + F +E+ E ++ +LL L+ ++ IFR+AH++KG + + GF Sbjct: 1 MFDEEGYRKLFVEESRENHENIVNNLLALESGDDQHTAIDEIFRSAHTLKGMSASMGFDA 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 ++ H ME++ R G ++ + +L L D ++ LDA + ++P + Q Sbjct: 61 MEHLCHSMEDVFSLIRSGRREVTASLTDLLLTCTDAIEGMLDAIEAGEKPSDEQSTSLVQ 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG------EVDLL 175 L+ A E + ++ A P+ + P + + LL Sbjct: 121 DLQAFAEEEEEGGEQETPDMAASAGVPPEQAEEADGRPLYTLAVAVDPSSTMKDIRAMLL 180 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV-------------------LCFVI 216 + L + T+ + L E I + L Sbjct: 181 LQNLEEIGTVRSTTPSRELLEDGKFDGAFEILIESEAGVDALRTIASGTEISLLALSTSQ 240 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE-KTTRSNESTSIRVAVEKVDQLI 275 V+ + P + Q P +V+R K +S E +IRV ++++D+++ Sbjct: 241 SPTVAPLAIPPVASEEVRAPEQAPSEPQIPPPQVQRAVKAEKSREIKNIRVDIQRLDRMM 300 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 NLV +LVI + L Q + + + ++ + R+ DLQ +M IRMMP+E +F+R Sbjct: 301 NLVEDLVINRGRLEQIAKKH---GIKEFDEALSMVGRSVSDLQNLMMGIRMMPLERIFNR 357 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 PR+VRD+A GK+VE ++ G TELD+S+++ + DPL H++RN+++HGIE PE R A Sbjct: 358 LPRVVRDVANHDGKEVEFSIEGGETELDRSMMDGLSDPLLHIIRNAVNHGIETPEIREAG 417 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAM 452 GK G+L L+A N+ I++ DDGAG++ ER+ K +GL +E + DE+ Sbjct: 418 GKPPKGSLRLTARRDKDNVVIDIEDDGAGIDTERLRKKGVEKGLMTAEAAASATKDELVG 477 Query: 453 LIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAIL 512 L+F PGFSTAE +TD+SGRGVG+DVVK+ I+ + G ++++++ G GT ++LP T+AI+ Sbjct: 478 LLFEPGFSTAETITDISGRGVGLDVVKKTIESLKGSIKVETEVGRGTKFELVLPPTMAII 537 Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 D M V ++ +P++ V+E Q R +H + E +L +R + LP+ L +F A Sbjct: 538 DVMMVHISGMRCAIPVSNVVEVAQTRPEAIHRIGNSEAIL-LRDQTLPMHRLEDMFGRAE 596 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVA 632 +V+LQ+ GRR ++VD + GQ +VVVK L GIS TI GDG V Sbjct: 597 KSD-----TLVVLQNDGRRCCIVVDSVDGQQEVVVKPLSRIAGNCRGISGITIPGDGDVV 651 Query: 633 LIVDVSALQ 641 ++DV+ + Sbjct: 652 PVLDVNTMI 660 >UniRef50_B5ZCW7 CheA signal transduction histidine kinase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCW7_GLUDA Length = 751 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 240/738 (32%), Positives = 369/738 (50%), Gaps = 84/738 (11%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D+ D Q FF E DE L ++E+ L L E +NA+FRA HSIKGGA +FG Sbjct: 7 MNGDMDDILQIFFQECDEQLQELERGLSALSDGESGHETINAVFRAVHSIKGGAASFGLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L H+ E+ LD R + +II FL+ D++ + + + D Sbjct: 67 NLVRFAHVFESSLDGLRSDRISPTPEIIKTFLKAMDVLSDLVAEARDGASVDHGRVAESQ 126 Query: 121 QALRQLALEAKGE------------------TPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 L L P V V +E + + Sbjct: 127 AELETLINGDGAPKKTEDVIPADFVPVPMDFVPVPVDFEPVAVDFSFDEEPAPAAPAASH 186 Query: 163 ILSRLKAGEVDLLEEELGH---------------------------LTTLTDVVKGADSL 195 ++ + + + D S Sbjct: 187 LVVTFRPHDAMYERGDDARNILIGLADAASAYGGVGTVTCDVSALPAFASLDPEISYLSW 246 Query: 196 SAILPGDIAEDDITAVLCFVIEADQITF-ETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 +LP ++ E+ + AV +V + +T + P + A + G E E Sbjct: 247 RVVLPSEVTEESVRAVFDWVGDVCDLTVSRGDDQEPDQDEAALPAPDAVASDAGVPEAED 306 Query: 255 TT----------------------------------RSNESTSIRVAVEKVDQLINLVGE 280 R E SIRV + ++D L++LVGE Sbjct: 307 AAVLLPASSPPQDTPVHVAPAPEAPPATGGGGGAPVRRPEQASIRVDLHRIDDLMDLVGE 366 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVI Q+ + S D +L+ S+ +Q RD+Q++VM++R P+ VF R R+V Sbjct: 367 LVIAQAAIESLSRRDDSSAMRELVESVTSMQSLTRDIQDAVMAVRAQPVRSVFQRMQRVV 426 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 R+ K V LTL G TE+D++L+E++ DPLTH++RN++DHGIE E RLAAGK++ Sbjct: 427 REACSMTDKDVVLTLEGEDTEVDRTLVEKLTDPLTHMLRNAVDHGIEKTEDRLAAGKSAT 486 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGF 459 G+++LSA H+ G I I + DDG G+NRER+LA A S+G+ + ++DDE+ L+FAPGF Sbjct: 487 GHVLLSAAHRSGRILITIRDDGGGINRERVLATAISRGIVAPDAVLTDDEINNLLFAPGF 546 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STA +V+D+SGRGVGMDVVK+ I +GG + I S +G GTT + LPLTLA+LDGM V Sbjct: 547 STAAKVSDLSGRGVGMDVVKQAILSLGGRITISSVRGEGTTFCLSLPLTLAVLDGMLVSA 606 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA--GAKTEA 577 D ++P+++V+E++ D++ L GG V+ +RG +P+V L K ++ G+ + Sbjct: 607 GDSTMVIPVSSVVETMMIDHQDVYTLPGGGNVISIRGSCMPLVPLGKELGLSSAGSDERS 666 Query: 578 TQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 + +++++++ G R AL+VD++ Q QVV+K++E NYR++PG+SAATILGDGSV+LI+D Sbjct: 667 DEAVILVVENESGARAALIVDKIHDQTQVVIKSMEKNYRQIPGVSAATILGDGSVSLILD 726 Query: 637 VSALQAINREQRMANTAA 654 V L A + Sbjct: 727 VPGLIASVIGRIDTKPPG 744 >UniRef50_A8EU21 Chemotaxis protein CheA n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EU21_ARCB4 Length = 685 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 227/670 (33%), Positives = 373/670 (55%), Gaps = 27/670 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 MS DIS + + F +EA EL + LL + +++ +FR H++KG + Sbjct: 1 MSFDISKYREMFLEEAVELFESADNVLLEAENNGSLTDDEMGQLFRDVHTLKGSGASVEL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + E TH +ENL+D+ R +++ ++ ++ D+M+E LD +Q + Sbjct: 61 AFFAEFTHDVENLMDKLRSHKIEFVPEMAGTLIDGLDVMKEILDLEVSNQMTREKFTEMT 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 L + + G T + K E + S++ E + + Sbjct: 121 SSLLEDIRAYSNGGTVKKEEAPKIEVKKEEVISSNSSENKENFGFFDNGLNEQRDSKSQP 180 Query: 180 GHLTTLTDVVKGADS-----------LSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 + D+ + + + + D D+ F + IT + V Sbjct: 181 YGIFADDDMNENHKNYGFFDDNLEKKSNDLNDEDFKLDNSKEDFGFFDDMPSITPDAVMK 240 Query: 229 SPKISTPPVLKLAAEQAPTGRV----------EREKTTRSNESTSIRVAVEKVDQLINLV 278 + I Q + E K SN + SIRV ++K+D L+N V Sbjct: 241 TNDIEEQKEETPVVVQKESEVATRRMKNNNVEEEAKKVPSNNNNSIRVNLDKIDLLMNNV 300 Query: 279 GELVITQSMLAQRSSELDPVN-HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 G+LVIT +ML Q SS ++ G ++ + L+R+ RD+Q+S+MSIRM+PM+ ++S++P Sbjct: 301 GDLVITNAMLTQFSSTIEETKTRGSVLERLELLERHIRDMQDSIMSIRMVPMDSIYSKFP 360 Query: 338 RLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGK 397 ++VRD++ KL K+VE G + E+DK++IE + DPL H++RNSLDHGIE+PE R+A GK Sbjct: 361 KVVRDISKKLNKKVEFKHYGDNVEIDKAMIEGLTDPLMHIIRNSLDHGIEMPEDRVALGK 420 Query: 398 NSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLI 454 G++ +SAE G + I + DDG G++ E++ KA +G M+++E A+LI Sbjct: 421 PETGSISISAEQANGQMIITIQDDGKGIDSEKVAQKALEKGQIDENQYNAMTNNEKALLI 480 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F G STA+++TD+SGRGVGMDVVK NI K+GG + + ++ G GTTI I+LPLTLAILDG Sbjct: 481 FGAGISTADKITDISGRGVGMDVVKTNIHKLGGVINLDTEIGKGTTITIMLPLTLAILDG 540 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGG-ERVLEVRGEYLPIVELWKVFNVAGA 573 + +RVA++ +ILPL++++ESLQP + + G + +L +R E++P+V+L ++F + + Sbjct: 541 LDIRVANQKYILPLSSIVESLQPTADMIKKIGDGTQDLLMLREEFIPVVKLHQLFGLEKS 600 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 + G++++++SG + AL +D+ + QHQVVVK L+ N+R V GI AAT+ GDGS+ L Sbjct: 601 FEKLEDGMLIVVKSGNTKVALSIDEFLNQHQVVVKPLDKNFRSVQGIGAATVKGDGSIGL 660 Query: 634 IVDVSALQAI 643 I+DV + Sbjct: 661 ILDVVGIINA 670 >UniRef50_Q04U49 Chemotaxis protein histidine kinase n=5 Tax=Leptospira RepID=Q04U49_LEPBJ Length = 1078 Score = 573 bits (1477), Expect = e-162, Method: Composition-based stats. Identities = 213/704 (30%), Positives = 354/704 (50%), Gaps = 61/704 (8%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ + ++ + F +E+++ + ++ +LL L+ + + +N IFRAAHS+K A G Sbjct: 1 MAGILGEYTELFLEESEDQIEELNINLLRLEADHKNLSIINDIFRAAHSLKSSAAFVGLY 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L + H MENLL R G++Q+ ++NL + D+++ + + + + + D I Sbjct: 61 NLSDLAHKMENLLQLTRDGKLQVKLPLVNLLFQCFDLIKYVIRSVAEGNKIETPFTDMI- 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL---------------- 164 Q L + + A + A S L Sbjct: 120 QKLDAYEKDPTSFSNVAGASSAQAAPFSNAPASSVPAQKSVEALATSAASSAPAKSVSYS 179 Query: 165 ----------------------------------SRLKAGEVDLLEEELGHLTTLTDVVK 190 S +K L+ + L +L + V Sbjct: 180 GLEIHLEAEEVRELEEEIRKSGKCWKISVTLGKDSPMKGLRFSLILQNLKNLGVVFKSVP 239 Query: 191 GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV 250 + L + + + VE P ++ A Sbjct: 240 DLEELDKGMDVTSIALLFISSESLEQIRTAANVDMVEFLDVQEYVPTVQEAVTANFKIED 299 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-----DPVNHGDLIT 305 + + SI+V+ +K+DQL+N VGEL+IT S + +L + DL + Sbjct: 300 DMAASESRVTLKSIKVSSDKLDQLMNNVGELIITNSGFQRIYDDLIRVFGEDQLFNDLKS 359 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + + R +++LQ +M+IRM+ + VF R+ RLVRDL+ + GK+V L L G STELDK Sbjct: 360 RIDLINRISKELQSGIMNIRMVQISTVFRRFSRLVRDLSLETGKKVNLVLSGESTELDKK 419 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +I+ + +PL HL+RNS+DHGIE P +RLAAGK VG L L++ G NI +E+ DDG GL Sbjct: 420 VIDALGEPLLHLIRNSVDHGIETPAERLAAGKPEVGTLELNSYQGGSNIMVEIRDDGRGL 479 Query: 426 NRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + E+IL+KA +GL + N+S+ E+ IF GFSTAE+VTD+SGRGVGM+VV I Sbjct: 480 DSEKILSKAIEKGLVGATEASNLSEQEIFQFIFQAGFSTAEKVTDISGRGVGMNVVNNLI 539 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 Q+ G + I S +G G++ + P LAI+ + V + +EV+ PL+ V E+++ + Sbjct: 540 QEFKGKIIINSVKGQGSSFVLSFPQALAIIPSILVLMEEEVYAFPLSEVNETIKINNDQI 599 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 L G E ++ +RGE LPI L ++ + KT+ + VVI+Q GR+ +VD+L+G+ Sbjct: 600 TTLEGNE-IINLRGEVLPIYRLNRIIGL-QDKTDREEFPVVIVQYKGRKIGFMVDELVGK 657 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 H+ V+K+LE N++ + G++ A+I+GDG++ +++D+ + I E Sbjct: 658 HETVIKSLEKNFKNIRGLTGASIMGDGTIIMVLDIPGIVEIASE 701 >UniRef50_B8DJV2 CheA signal transduction histidine kinase n=5 Tax=Desulfovibrio RepID=B8DJV2_DESVM Length = 724 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 240/717 (33%), Positives = 361/717 (50%), Gaps = 75/717 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M F +EA +LLA++E LL L+ + D + + +FRA H+IKG FGF Sbjct: 1 MQSQEDANRAAFIEEAQDLLAELETALLELEAQPDDRDLVARVFRAMHTIKGSGAMFGFD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E + D R GE+ + +++L L ++D + + L+ PD A I Sbjct: 61 DIAHFTHDVETVFDRVRNGEVPVTRQLLDLTLASRDHIAQLLNCAVTGDAPDLAHAAAIT 120 Query: 121 QALRQL------------------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 +LR L A+ E P + + P S + Sbjct: 121 ASLRALVPVAAPPADAPADGAADGECPAETEAPCPPCARTWRVRFRPVPSILFSGANPLA 180 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVI---- 216 +L L+ + + L ++ +L + E I V FV Sbjct: 181 LLDELRDMGGAQVFPHFSEVPGLDELQPELCHVWWDVLLSSESNEAAIRDVFLFVEDDAD 240 Query: 217 ---------------------------------------EADQITFETVEVSPKISTPPV 237 + + + + + V Sbjct: 241 VDILLVDDARIVDDAAYKRLGEILIERGDVSSDDLHRVLDEQRPLGRLLTDAGVVPPERV 300 Query: 238 LKLAAEQAP----TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 AEQ ++E T R + SIRVA K+D L++LVGELVI Q+ L+Q + Sbjct: 301 DAALAEQQAVRTIRQSRDKESTARDDSGASIRVAASKLDFLVDLVGELVIVQAQLSQAAH 360 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 L+ + +L+R + +L+++ + IRM+P+ FS++ RLVRDL+ +LGK VEL Sbjct: 361 LRSDPG---LLGLVEELERLSDELRDTTLGIRMLPIGTTFSKFRRLVRDLSAELGKDVEL 417 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 +G TELDK++IER+ DPL H +RNS+DHG+E P+ R AAGK G + LSA H GG Sbjct: 418 VTLGGETELDKTVIERLGDPLVHCLRNSMDHGVESPDVRAAAGKPRTGTVTLSAAHAGGE 477 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 + I + DDGAG++ R+L A +G+ + + E LIFAPGFSTAE+VT VSGRG Sbjct: 478 VLITIADDGAGIDPARVLEIARRRGVIAPDVELPAREAIELIFAPGFSTAEKVTSVSGRG 537 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVVKR+I+ + G +E+ S G GTT+ I LPLTLAI+DG+ V V E +++PLN V Sbjct: 538 VGMDVVKRSIEALRGRIELDSAVGRGTTLTIRLPLTLAIIDGLQVLVGGESYVIPLNHVE 597 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 E + G +R++ +RGE +P + L ++F +G Q VV++ + G R+ Sbjct: 598 ECAEHSTPS--SADGRQRIINLRGEIVPYIRLRELFASSGPAPAIEQ--VVVVDAQGSRF 653 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 L+VD ++G+HQ V+K+L Y+ VPGIS ATI GDGS+ALI+DV L + +Q Sbjct: 654 GLVVDCVVGEHQTVIKSLGRIYKDVPGISGATIKGDGSMALILDVPGLVQLAVDQPP 710 >UniRef50_B8FTS1 CheA signal transduction histidine kinase n=2 Tax=Desulfitobacterium hafniense RepID=B8FTS1_DESHD Length = 729 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 233/711 (32%), Positives = 372/711 (52%), Gaps = 73/711 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ +F + ++ E + + LL L+ E + +N +FR+AHS+KG +GT GF+ + Sbjct: 12 DLGEFLDFYLLDSQEQIEKLAAGLLQLEKEGNNVGLINDLFRSAHSLKGASGTMGFTSIV 71 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIM-----------------QEQLDAYK 106 TH E+LLD R+G+M+++ ++++ L D + Q+ +D + Sbjct: 72 ALTHSAEDLLDRLRQGKMEVSLPMVDVLLAVTDRVKEMLSQVEKRVEITAEYQDLVDEMR 131 Query: 107 Q--SQEPDAASFDYICQALRQ--LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 + E A + +++ + + + ++ V S+ + Sbjct: 132 ALMNGETPAPVKEADSNDMKENLTSNYTRVDFQLSLEVAEQVKSSQDMGHGVYQVDIKFA 191 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA--------ILPGDIAEDDITAVLCF 214 + ++A + + + +L + + + L ++ D ++I + Sbjct: 192 PNTLMRAVRAVMAVQRMENLGKVVKLRPSVEELEVGSEEGFAMLILSDDPPEEIRGEILL 251 Query: 215 VIEADQITFETVEVSPKISTPPVLK----------LAAEQAPTGRVEREKTT-------- 256 V E ++ + + + E AP+ V E Sbjct: 252 VSELAEVEVHPYRIGDAVDGYGSEEVAAAQAAELLPVVEAAPSLPVRPEAKPVQAAPVIP 311 Query: 257 -------------------RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 +N+ +IRV ++D LINLVGE+VIT++ L Q EL Sbjct: 312 AAPAAPKPAAGNGNNAATDGNNQVHTIRVDTVRMDNLINLVGEMVITRTRLVQIGHELKE 371 Query: 298 VNHGD-----LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 D L + L R DLQES M +RM+P+ VFSR+PRLVRDLA K K++E Sbjct: 372 QYRMDALVNNLNETTVYLGRLMSDLQESAMRLRMVPIGTVFSRFPRLVRDLARKTQKEME 431 Query: 353 LTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGG 412 L L G TELDK+++E I DPL HL+RNS+DHGIE PE+R AAGK +G + L A H+G Sbjct: 432 LVLRGEDTELDKTVVEVIGDPLMHLIRNSVDHGIETPEERRAAGKPELGTITLDAYHEGN 491 Query: 413 NICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGR 471 +I I ++DDG GL+ RI KA S+GL E +S+ ++A LIF PGFSTA++VTD+SGR Sbjct: 492 HIAILISDDGKGLDLNRIYEKALSRGLVGEREGLSERDIANLIFLPGFSTADKVTDISGR 551 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVVK+ + +GG ++I ++QG GTT I LPLTLAI+ + V V+ E++ +PL++V Sbjct: 552 GVGMDVVKKALNNLGGMIDITTRQGQGTTFTIRLPLTLAIIQALLVEVSTEIYAVPLSSV 611 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 +E+L D+ + GG ++++RG LP++ L F + + EA + VV++ G + Sbjct: 612 LETLLVERKDIKNV-GGLPMVQLRGNTLPLISLRDKFELPAPEAEAEEVFVVVVGLGDKA 670 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+VD L GQ +VV+K+L +PGI+ ATILGDG V LI+D+ +L Sbjct: 671 LGLIVDGLRGQQEVVIKSLGDFLNNLPGIAGATILGDGKVTLILDIGSLIQ 721 >UniRef50_Q53135 Chemotaxis protein cheA n=8 Tax=Rhodobacteraceae RepID=CHEA_RHOSH Length = 686 Score = 570 bits (1469), Expect = e-161, Method: Composition-based stats. Identities = 223/671 (33%), Positives = 348/671 (51%), Gaps = 34/671 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQP---EAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MD SD FF E ++L+ + + L ++ + D E +NA+FRA HSIKGGAG F Sbjct: 1 MDQSDIRSAFFVECEDLMEALNEGLDRIEDTLDDGHDDETVNAVFRAVHSIKGGAGAFKL 60 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 L H E LD R G + + ++ L + D + + L A + E D + Sbjct: 61 DALVRFAHQFETTLDALRAGRVSADPPLLALLHKAADRLSDLLQAARTGSETATIDPDDL 120 Query: 120 CQALRQ---------------------LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQS 158 L Q L L+ P P + Sbjct: 121 VAQLAQAAGEEEAGEADAEDLGFVPMRLDLDLPAAAPDEGQSGCYSIDFSPTRALYACGN 180 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTT--LTDVVKGADSLSAILPGDIAEDDITAVLCFVI 216 I+ L + + L D + L D E I V FV Sbjct: 181 DTSILFRVLSDLGRMEVRLDRSRLPDFDALDWQESWLDWHLTLETDEPEHQIDEVFEFVE 240 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTS------IRVAVEK 270 + ++ + + + P P K + + + + +RV +++ Sbjct: 241 DLCRLEIRPMAMEAPRTDPDPEPDPEPDPPASGPAAAKKSPAEDHRTSSPRATVRVELDR 300 Query: 271 VDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPME 330 VD+LIN+VGELVI Q+ML+Q + + + + AR++QESVM+IR ++ Sbjct: 301 VDRLINIVGELVINQAMLSQCVQDEGVPPRSPVRNRLDDFRNLAREIQESVMAIRAQAIK 360 Query: 331 YVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPE 390 +F R R+ R+ + KQ+ L G STE+DK++IER+ DPLTH++RN++DHGIE + Sbjct: 361 PLFQRMSRIAREASEISQKQIRLVTEGESTEVDKTVIERLADPLTHMIRNAVDHGIEPAD 420 Query: 391 KRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDE 449 +RL GK VG + L+A H+ G + IE+ DDGAG+NR R+L A +GL + ++++E Sbjct: 421 RRLHLGKPPVGLITLTAAHRSGRVLIEIKDDGAGINRPRVLEIAQGKGLVAQDAQLTEEE 480 Query: 450 VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTL 509 + L+F PGFSTA V+D+SGRGVGMDVVK I+ +GG + I S G GTT I LPLTL Sbjct: 481 IDGLLFMPGFSTASVVSDLSGRGVGMDVVKSAIESLGGRITIASDPGVGTTFTISLPLTL 540 Query: 510 AILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFN 569 A+LDGM V V + ++P++A++E+L+PR AD+H L G++V+ +RG +PIV+ +F Sbjct: 541 AVLDGMVVDVGGQTMVVPVSAIVETLRPRPADIHVLGSGDQVVAIRGSLVPIVDCGSIFG 600 Query: 570 VAGAKTEATQGIVVILQSGGRRY-ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 + +++++++ ++ AL+VD + Q QVV+K LE+ Y ++PG++AATILGD Sbjct: 601 FRAPVRSYEESVLLLVETARQKLCALVVDTIHDQRQVVIKGLENGYGRIPGVAAATILGD 660 Query: 629 GSVALIVDVSA 639 G +ALI+ Sbjct: 661 GRIALIIAPEE 671 >UniRef50_Q47GY3 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=13 Tax=Proteobacteria RepID=Q47GY3_DECAR Length = 741 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 228/735 (31%), Positives = 348/735 (47%), Gaps = 98/735 (13%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E LADME LL L+ D + +N IFRAAH+IKGG+G ++ Sbjct: 1 MDEITSVFIQESREQLADMEAGLLQLEQNPNDHDNINGIFRAAHTIKGGSGVIECHFIEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS----FDYIC 120 TH +ENLLD R E+ ++ + L LE D M ++ E A D + Sbjct: 61 FTHRVENLLDALRNNELAVSPPLATLLLECCDHMVSLIEVLAAESEAPDAECQARGDALT 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQS----------------------RSQS 158 + L+ + V + + E S Sbjct: 121 ERLKHFLDGKGETAATPEASSLAVHDATVEVESSGGGIVLTDSWHISVRFGENVLRGGMD 180 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVI 216 P I GE+ +E + ++ + L ++ DI V FV Sbjct: 181 PLSFIRYLSTLGEILGIETISEAMPAAAEMDPESCYIGFEIQLQTRSSKADIERVFDFVR 240 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGR--------------------------V 250 + + + +L + G + Sbjct: 241 DDCDLRILPPNSKLSEYIKHIQELPEDTMRLGEILVRCGALTQGELDQGLLSQKFSAENL 300 Query: 251 EREKTTRSNESTSIRVA---------------------------------VEKVDQLINL 277 + + ++ I V +K+DQLI+L Sbjct: 301 SPDNASPGHQLGEILVDHRVVLKEIVDAAVVKQAQINDKKAKEARLVRVQADKLDQLIDL 360 Query: 278 VGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 VGELVI + + + GDL+ + L R ++++S + +RM+ + F+R+ Sbjct: 361 VGELVIAGASANLLAQK---SKQGDLVEATSVLSRLVENIRDSALQLRMVQIGDTFTRFN 417 Query: 338 RLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGK 397 R+VRD++ +LGK++EL + G+ TELDK+++E+I DPL HLVRNSLDHGIE RL GK Sbjct: 418 RVVRDVSKELGKEIELVISGAETELDKTVVEKIGDPLMHLVRNSLDHGIEPTAVRLERGK 477 Query: 398 NSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFA 456 + G + L+A H G+I IE++DDG GLN+E+I AKA +G+ E +SD E+ LIF Sbjct: 478 PACGRVALNAFHDSGSIVIEISDDGGGLNKEKITAKALERGVIQPGETLSDSEIVNLIFE 537 Query: 457 PGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMS 516 PGFST ++V+++SGRGVGMDVV+RNIQ + G V++ S G G T I LPLTLAI+DG Sbjct: 538 PGFSTVDKVSNLSGRGVGMDVVRRNIQALRGAVDVASVDGQGATFTIRLPLTLAIIDGFL 597 Query: 517 VRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE 576 V V +++PL+ V+E + +L L +RGE LP + L ++F V G Sbjct: 598 VGVGKAAYVIPLDTVVECI-----ELKNQLTERNFLNLRGEALPFIRLRELFEVPGEPPP 652 Query: 577 ATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVD 636 +V++Q GG+R ++VDQL+G+ Q V+K L + +R + GI +TILG G VALI+D Sbjct: 653 RE--SIVVVQFGGQRAGIVVDQLMGEFQTVIKPLGAMFRHLRGIGGSTILGSGEVALILD 710 Query: 637 VSALQAINREQRMAN 651 V+AL + Sbjct: 711 VAALVHAVTQAEAQK 725 >UniRef50_A0LVV5 CheA signal transduction histidine kinases n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LVV5_ACIC1 Length = 870 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 207/690 (30%), Positives = 322/690 (46%), Gaps = 43/690 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E+ E L +++ L+ L+ E + L +IFR H+IKG +G F+ L+ Sbjct: 4 FEEIVREFLVESYENLDQLDRDLVALEQEPGSRDLLQSIFRTIHTIKGTSGFLAFNKLEA 63 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH E LL + R G ++ + + LE D ++ L A + + + + L Sbjct: 64 LTHAGEGLLAKLRDGGLEFTRERADGLLELVDAVRTILAAIETTGTEGDGDYTALTAKLS 123 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI---------------------- 162 L + + A + P R Sbjct: 124 ALQELPAEDAAGKTQSAAHPAHAADSVITDSPADPGRSEAAAAAPAGAETPTPAATPPAD 183 Query: 163 ---------ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLC 213 +A L + L +L A DD + Sbjct: 184 VPAPAGAGNPDQPPEATPAKARGRRPPKLPAVKPEEPRVPLLGEVLKEQAAVDDADLAVA 243 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 + + T E+ + ++ A A + T + TS+RV V +D Sbjct: 244 RLEQELGDTRPIGEILVEHGQVTSEQVRAALAAQAEAKASTTPHTVAETSLRVDVTLLDT 303 Query: 274 LINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 L+ LVGELV+T++ + ++ + + +L +LQE VM RM P++ VF Sbjct: 304 LMRLVGELVLTRNQIVATAATQSDSV---IARAAQRLNLLVTELQEGVMKTRMQPIDTVF 360 Query: 334 SRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRL 393 S+ PR+VRDL GKQV L + G TELDK+++E I DPL H VRN++DHGIE PE R Sbjct: 361 SKLPRVVRDLGLACGKQVRLEIEGRDTELDKTILEAIKDPLVHAVRNAIDHGIEAPEVRR 420 Query: 394 AAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--NMSDDEVA 451 GK + G L+L A H+GG + IE+TDDGAG++ +R+ +A G MS E+ Sbjct: 421 ERGKPTEGRLVLRAYHEGGQVNIEITDDGAGIDPQRVAERAIQAGFDAEHVRRMSQRELI 480 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 LIF PG STAE VT+VSGRGVGMDVV+ N++++GG V++ S+ G GTT+RI +PLTLAI Sbjct: 481 NLIFVPGLSTAETVTNVSGRGVGMDVVRANVERIGGTVDVTSELGVGTTLRIKIPLTLAI 540 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG---GERVLEVRGEYLPIVELWKVF 568 + ++V E + +P + E + V +RG +P+V L + Sbjct: 541 IPALTVECRGERYAIPQVNLDELVSLEGDQASRGVEFLSDAPVFRLRGNLIPLVWLDHIL 600 Query: 569 NVAGAKTEATQGI----VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 + +V+LQ+ GRR+ L+VD+++ ++VVK L +++ + AT Sbjct: 601 GLGRPPRPGDPLPEIVSIVVLQAEGRRFGLVVDRILNTEEIVVKPLSRKLKEIGAYAGAT 660 Query: 625 ILGDGSVALIVDVSALQAINREQRMANTAA 654 I+GDG V LI+DV AL + A+ A Sbjct: 661 IMGDGRVCLILDVRALARRAHVVQDADHHA 690 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 3/87 (3%) Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + V V +PL+ V + A + + G V++ RG YLP+ L + + Sbjct: 709 LVVAVGHRRIGIPLSMVTRLEEIDAAQIEHV-GRRPVVQYRGHYLPLARLSDLLGEPAS- 766 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIG 601 + + VV+ G R L+VD +I Sbjct: 767 -DGERLTVVVYTQGRRSVGLVVDTVID 792 >UniRef50_Q07IM6 CheA signal transduction histidine kinases n=7 Tax=Alphaproteobacteria RepID=Q07IM6_RHOP5 Length = 947 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 201/655 (30%), Positives = 323/655 (49%), Gaps = 11/655 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D + F E +E L ++ L+ + E +A+ L+ IFR H+IKG G G L+ Sbjct: 12 MDDLLREFLTETNESLDTVDNQLVRFEQEPNNAKILDNIFRLVHTIKGTCGFLGLPRLEA 71 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E L+ + R G M + ++L L T D ++E L + ++ + L Sbjct: 72 LAHAAETLMGKFRDG-MPVTGGAVSLILATIDRIKEILGQLEATEAEPEGVDQDLIGQLE 130 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L+ A + + + + +A + + Sbjct: 131 ILSEGGGAVEAEAEAVVEAPVAEVEAAPVAPASETEVLPQVLERALRPGEVSLDELERAF 190 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + ++ P AE ++ + + E + + + Sbjct: 191 QETETEPEMASPSLAPEADAEPVRLEIVKAEAKPEAAKPEAKMSKAEAAKAAAKAAMKPK 250 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P G E + SIRV V+ ++ L+ +V ELV+T++ L + S + + Sbjct: 251 KPAGDAETVLEGDKIANQSIRVNVDTLEHLMTMVSELVLTRNQLLEISRRHEDT---EFK 307 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L +LQ+ VM RM P+ + + PR+VRDLAG+LGKQ+EL + G+ TELD+ Sbjct: 308 VPLQRLSTVTAELQDGVMKTRMQPIGNAWQKLPRIVRDLAGELGKQIELEMHGADTELDR 367 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ I DPLTH+VRNS DHG+E +R GK G + LSA H+GG+I I + D+G G Sbjct: 368 QVLDLIKDPLTHMVRNSADHGLETTVERAELGKPEQGTIRLSAYHEGGHIVICIADNGRG 427 Query: 425 LNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 LN E+I AKA + GL E MS+ ++ IFAPGFSTA VT VSGRGVGMDVV+ N Sbjct: 428 LNTEKIKAKAVANGLASEADVEKMSESQIHKFIFAPGFSTAAAVTSVSGRGVGMDVVRTN 487 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I ++GG ++I+S G GT++ I +PLTLAI+ + V A F +P AV+E ++ Sbjct: 488 IDQIGGTIDIKSVAGEGTSVTIKIPLTLAIVSALIVEAAGNRFAIPQLAVVELVRAHANS 547 Query: 542 LHPLAG--GERVLEVRGEYLPIVELWKVFNVA--GAKTEATQGIVVILQSGGRRYALLVD 597 H + VL +R + LP++ L K+ + A+ E G +V+ Q G + + ++VD Sbjct: 548 EHKIERIKETPVLRLRNKLLPLMHLRKLLKIDNGSAEAEPENGFIVVTQVGNQTFGIVVD 607 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 + ++VVK + + R + S TILGDG+V +IVD + + Q A Sbjct: 608 GVFHTEEIVVKPMSTKLRHIEMFSGNTILGDGAVIMIVDPNGIAQALGTQVAAQH 662 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 7/91 (7%) Query: 512 LDGMSVRVA-DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 + R + +PL+ V + + ++ G +++ R + +P+V + V Sbjct: 680 TSLLVFRAGTAQPKAVPLSLVTRLEEIAADKIE-ISNGRYMVQYREQLMPLVTMEGV--- 735 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + +++ R L+VD+++ Sbjct: 736 --TVATSGAQPILVFADEDRAMGLVVDEIVD 764 >UniRef50_D1B4I4 ATP-binding region ATPase domain protein n=2 Tax=Campylobacterales RepID=D1B4I4_SULD5 Length = 678 Score = 567 bits (1463), Expect = e-160, Method: Composition-based stats. Identities = 213/678 (31%), Positives = 356/678 (52%), Gaps = 41/678 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M Q F +EA+E++ M+ ++ + A D LN IFR H++KG A F FS L Sbjct: 1 MSKEKLRQIFIEEANEIIEKMDIDIVNYESAASDKALLNEIFRGVHTLKGSANAFNFSRL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E H E++LD R E N+ ++LFLE+ +++E L + ++ + Sbjct: 61 GEFVHHFEDILDFFRNSEDIPNSSHVDLFLESVSVIKETLVCDVEGSAQLPEAYGLCLEK 120 Query: 123 LR-QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSP---------------------- 159 ++ L + E PS+ + + + + + S P Sbjct: 121 IQMLLLTLREPEMPSSSSSTDLTLEFDNEHFFPSSALPDVKTFLAQCQSNEKLYRITLTL 180 Query: 160 -RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI-------------LPGDIAE 205 I L +G + + A L + Sbjct: 181 ESDIYLRGFDHFLFFKNLLHVGKIVASFWSIPKGLEDEAFDVERNILSKVTLCLITQESR 240 Query: 206 DDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST-SI 264 + I V F+ + E V + STP ++ E + E + + + + Sbjct: 241 EAIEDVFAFLEPEEFHIEEVVPSLNEPSTPLASQVREEAVVVDKEEAKPLKSALVTKNFL 300 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 ++ +K+D+L + +GELVI Q+ L + +S++ + ++ ++ L + R +Q VM + Sbjct: 301 KIDAQKLDELFDSIGELVIAQNCLGE-NSKIKAIQDTEVTKTIENLSKITRLIQNRVMGL 359 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ F + R+VRD + K+ K + LTL G TE+DK+++E + DPL H++RN++DH Sbjct: 360 RMIPIRDTFEKMKRVVRDSSKKVNKPIHLTLEGEETEIDKTMVEALSDPLVHIIRNAIDH 419 Query: 385 GIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 GIE E+RL AGK+ GN+ L A H+GGNI IEV DDG G+N+ ++ KA +GL + Sbjct: 420 GIEGTQEERLQAGKSEEGNVRLRAYHRGGNIIIEVRDDGRGINKSKVYQKALERGLIEQD 479 Query: 444 N-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 +S++++ LI PGFSTA+ ++D+SGRGVG+DVV+ I+ + G V+I S++G GTT Sbjct: 480 EVLSENQIYGLIMQPGFSTADTISDISGRGVGLDVVRTAIEAVRGKVDISSQEGVGTTFS 539 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I+LPLTLAI+DGM VR +++FI+P ++ ES +P E ++H G E +++R E LPIV Sbjct: 540 IVLPLTLAIIDGMLVRSNEKIFIIPTLSITESFRPLEQNVHSARGKEEFVQLRSELLPIV 599 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L V ++ + +V +++ ++ALLVD+L+G+ QVV+K L + K GIS Sbjct: 600 RLNHVLDIDENAPPPWECTLVCVENSRGKFALLVDELVGRQQVVIKTLGAFLVKTEGISG 659 Query: 623 ATILGDGSVALIVDVSAL 640 ++G+G +ALI++V L Sbjct: 660 GAVMGNGEIALILNVEEL 677 >UniRef50_A3DDL6 CheA signal transduction histidine kinases n=3 Tax=Clostridium thermocellum RepID=A3DDL6_CLOTH Length = 715 Score = 566 bits (1460), Expect = e-160, Method: Composition-based stats. Identities = 207/716 (28%), Positives = 347/716 (48%), Gaps = 75/716 (10%) Query: 1 MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ ++S F E +LL +EQ L+ + E+ ++ IFR H+IKG A Sbjct: 1 MTDNVSREPMLDMFIFETLQLLDQLEQSLINSEKESGFESSIDEIFRIMHTIKGSAAMML 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQL--NTDIINLFLETKDIM-----------------Q 99 F + + H +E+L R + + +T+II++ L D + Sbjct: 61 FDDISKLAHSIEDLFFYLREEKPENVNSTEIIDIVLNGVDFIKNETVKLENGQEPDGDAS 120 Query: 100 EQLDAYKQ------------SQEPDAASFDYI-CQALRQLALEAKGETPSAVTRLSVVAK 146 + + + S PD+ S + + ++ + + + + Sbjct: 121 DLIKEIRDYLGNLKSINNAGSDSPDSESSHTLEVEKDQKYYISSNKAASTPKSHKYEAVL 180 Query: 147 SEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE---------------------------- 178 + + +I + +V+ E Sbjct: 181 KFEEQCGMENIRAFSVIHDLKEIADVNYFYPEDVIDGGGKSENSEIIQKDGFRVVFSTDL 240 Query: 179 -LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 L + SL + + ED + + + ++ + Sbjct: 241 GLDEVKERLSHTILLKSLDVYVINEDLEDIMGDMPDTRETELKEQELKMDGKANVLNDSS 300 Query: 238 LKLAAEQAPTGR---------VEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 + +GR + T S++ + I V + K+D+L++LVGE+VI+++M+ Sbjct: 301 QASEQNEHSSGRQLSNEKKTGPSADNTASSSKQSVISVNIAKLDKLMDLVGEIVISEAMV 360 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 Q + +L+ + + + QL + +LQ+ VMSIRM+P+ F + R+VRD+ KL Sbjct: 361 TQ-NPDLEGLQLDNFHKAARQLNKLTNELQDVVMSIRMVPLSMTFQKMNRIVRDMGKKLN 419 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K +EL ++G TE+DK++IERI DPL HL+RN++DHG+E P++R+A GK G + L A+ Sbjct: 420 KSIELEIIGEETEVDKNIIERISDPLIHLIRNAVDHGLEDPDERVAKGKPPAGKITLEAK 479 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAMLIFAPGFSTAEQVT 466 + GG++ I V DDG GL+RE+IL KA GL ++D E+ IF PGFST E VT Sbjct: 480 NAGGDVWIFVKDDGRGLDREKILKKAREAGLIHKPENELTDKEIYSFIFTPGFSTKENVT 539 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 + SGRGVGMD+V NI +GG + + S GTTI I LPLTLAI++GMS++V + + Sbjct: 540 EFSGRGVGMDIVSNNISMVGGTIFVDSVPDNGTTISIKLPLTLAIINGMSIKVGKSRYTI 599 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 P ++ ES + + + + G ++ VRGE P++ L K + + T GI+V+++ Sbjct: 600 PTISIKESFKVKNEAVITDSEGNEMIMVRGEVYPVLRLHKFYKINTEVTNINDGIIVMVE 659 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 S R + D+L+G+ QVVVK L +KV GI T+LGDGS++LI+DV+ L + Sbjct: 660 SDSRVICIFADELLGEQQVVVKALPKYIKKVKGIGGCTLLGDGSISLILDVAGLVS 715 >UniRef50_C1ZGC3 Chemotaxis protein histidine kinase-like protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZGC3_PLALI Length = 910 Score = 566 bits (1459), Expect = e-160, Method: Composition-based stats. Identities = 204/641 (31%), Positives = 317/641 (49%), Gaps = 36/641 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D Q F E+ E LA ++ ++ L+ E ++ L +IFR H+IKG G GF L + Sbjct: 2 DEDILQEFLAESWENLAQLDTEVVALEKEPSNSPLLASIFRTIHTIKGTCGFLGFEHLGK 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L + R GE+ + + I+L L+ D ++ L+ +++Q + L Sbjct: 62 VAHATENVLGKMRDGELDVTNEAISLVLDGVDTIKHLLETIEKTQAEPELDTSALIHKLD 121 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA + S + + + + + P +T+ Sbjct: 122 LLASLSSP--VSQPRHVPAPIQPQVLSGGTTASQPVNFQHPESTGELNTEQTSPATAVTS 179 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 VV S +A + + + Sbjct: 180 SAPVVSANVSKAAEVDPGSNRNG-------------------------KPAAMAAAPNSA 214 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + E + SIRV VE +D+L+NLVGELV+T++ L Q D Sbjct: 215 NGESDSDNEGRRSAAVDLSIRVNVEVLDKLMNLVGELVLTRNQLLQMVRGEDE---SRFQ 271 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + L R DLQE VM RM P+ +S+ PRLVRDL+ KQ+EL + G+ TELD+ Sbjct: 272 VPVTHLNRVTTDLQEGVMKTRMQPIGNAWSKLPRLVRDLSQVTSKQIELEMHGAETELDR 331 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ I DPLTH+VRNS DHGIE E R GK+ G + L A H+GG++ I V DDGAG Sbjct: 332 TVLDAIKDPLTHMVRNSADHGIEKAEIRRKQGKSESGTIRLKAFHEGGHVIIHVEDDGAG 391 Query: 425 LNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 ++ ER+ K +GL + +S++E+ IF PGFSTAE VT VSGRGVGMDVV+ Sbjct: 392 IHVERVRQKVLEKGLATESDLAHLSEEEILQFIFLPGFSTAETVTSVSGRGVGMDVVRTA 451 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+++GG VE++S+ G GTTIRI +PLTLAI+ + V + + F +P ++E ++ D Sbjct: 452 IERIGGTVELRSQWGQGTTIRIKIPLTLAIISALVVSSSGQSFAIPQLGIVELVRLSVDD 511 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQ 598 L + +R+ +R LP++ L + + +V++Q G ++ L+VD+ Sbjct: 512 LIRIEKIHDQRIFRLRDRLLPLLRLSDALKLPSLPPDNEGDMSIVVVQVGDEQFGLIVDE 571 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 + ++VVK L S + + TILGDG V +I+DV+ Sbjct: 572 VFDTQEIVVKPLGSILKDLRVYQGTTILGDGRVIMILDVAG 612 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 11/118 (9%) Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 E +PL V + + + G + V++ RG+ LP++ + + Sbjct: 654 ETMAVPLGLVARLEEFSLKQIEQV-GEQLVVQYRGDLLPLIPIR---GNSRDVQRLDPQP 709 Query: 582 VVILQSGGRRYALLVDQLIG--QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 VV+ R L+V+++ + + ++ K PG+ T++G G I+D+ Sbjct: 710 VVVFSDNSRMMGLMVNKIEDIIEETITIR----MQGKRPGVFGTTVVG-GKATEIIDI 762 >UniRef50_Q8F3H8 Chemotaxis protein CheA n=2 Tax=Leptospira interrogans RepID=Q8F3H8_LEPIN Length = 713 Score = 566 bits (1458), Expect = e-159, Method: Composition-based stats. Identities = 201/710 (28%), Positives = 353/710 (49%), Gaps = 71/710 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S+ TF E++ELL+ ME +LL+L+ ++ + E ++++FRA H+IKG +G FG+ + Sbjct: 1 MDLSEVRDTFISESEELLSSMESNLLILEKDSKNNEGIHSVFRAIHTIKGTSGMFGYEPI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 ++ TH +E+ LD R + L + I D ++ L ++ D+ + Sbjct: 61 EKFTHEVESFLDRIRSNKQSLTKEGIEFLFLACDHIRNLLQGVGETLIVDSQTSRNQVNL 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQ---------------------SRSQSPRR 161 L +T + +V P Sbjct: 121 LSLAKKLTLDDTSNPQKDEVLVQNQSTSSNLLDSHSSSTFWQITLIPNIHLFESGLDPST 180 Query: 162 IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIE-- 217 I ++G+V + + ++ L ++I + F+ E Sbjct: 181 FIKYLSQSGKVKHIFVYPESIPNWSEFNPEHSHLGFEISYESPSKGEEIYSTFQFLKEGS 240 Query: 218 -------------------------------------ADQITFETVEVSPKISTPPVLKL 240 + + + + Sbjct: 241 YLKILSPGCSLNLFMENCNDFPLGKKAYLNALEIQKVLTPEEIQKLSYTSENLNVLSTTQ 300 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + ++E + ++ ++RV K+D LI LVGEL+ ++ L+++ S+ + + Sbjct: 301 TEQTTTSIENQKESDSIKIQTKTLRVDSSKIDTLIALVGELITQEANLSRKISDSENL-- 358 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 LI S L R +++E +S+RM+P+ +F +Y R+VRDL+ +L KQVEL ++G T Sbjct: 359 -QLIESSESLYRLVTEIREFALSLRMIPISDLFEKYKRVVRDLSKELNKQVELEIIGGET 417 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELD+S+IE+I DP+ H++RN+LDHGIE E+R+ GK++ G L + A H G+I IE+ D Sbjct: 418 ELDRSVIEKISDPIVHILRNALDHGIETSEERIKKGKHATGQLKIQASHGTGSILIEIKD 477 Query: 421 DGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG GL+ ++IL KA S+GL + +S+ E+ LIF PGFSTA+QVT++SGRGVGMDVV Sbjct: 478 DGKGLDCDKILEKAISKGLITRDQNLSESEIYSLIFQPGFSTADQVTNLSGRGVGMDVVL 537 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 RNI+ + G V+IQ+ + G++ +I LPLTLAI+DG V+ + FI+P+ V E+++ Sbjct: 538 RNIESLRGTVQIQTLKDQGSSFQIRLPLTLAIIDGFLVKASSLYFIVPMQMVRETVE--- 594 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + + + +RGE LP++ L + + E +++L+ + + ++V+ L Sbjct: 595 SKVILNGSSSGTMNLRGELLPVLHLSEFLCLESTYFEKEN--ILVLEYEDKSFGIIVNDL 652 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 G+ Q V++ + ++ + S +ILG G +A I+DV L R+Q + Sbjct: 653 HGEVQSVIRPMAEIFKNIKCFSGTSILGSGEIAFILDVPGLYNSIRDQEL 702 >UniRef50_C9P4M6 Chemotaxis protein CheA n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P4M6_VIBME Length = 712 Score = 565 bits (1457), Expect = e-159, Method: Composition-based stats. Identities = 232/694 (33%), Positives = 357/694 (51%), Gaps = 67/694 (9%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDA--EQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 +T++ E+ ELL ME LL L+ E+LNAIFRAAH++KG AG F + T Sbjct: 9 LETYYTESRELLEGMELDLLELEAGNHQDLNERLNAIFRAAHTVKGSAGIFNLDAIVHFT 68 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY---KQSQEPDAASFDYICQAL 123 H +ENLLD+ R ++ L ++I+L +D M LD +Q + + + + L Sbjct: 69 HKVENLLDQLRSEQLVLTGEVISLLFRCRDHMLTLLDEAQFEQQHHADNQQISETLIEQL 128 Query: 124 RQLALEAKG-ETPSAVTRLSVVAKSE---------PQDEQSRSQSPRRIILSRLKAGEVD 173 E +T A + S E PQ P K G+++ Sbjct: 129 NAFLGEQPDVKTSEAPIKDSAPLTVEAQRFLWVKFPQSALQDGMDPLSFFAYLAKLGQIE 188 Query: 174 LL---EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQ---------- 220 + + L T D S L D +++I AV F+ + + Sbjct: 189 QIIFDDSSLPQEWTDFDSENCYLSWQIALNSDAQDEEILAVFEFIRDEGEVYLFSANQCT 248 Query: 221 ---------------------------------ITFETVEVSPKISTPPVLKLAAEQAPT 247 +EV + Sbjct: 249 PALLDELQQKGMHNLEHFQACGLQLDLMSEPLIDAESPIEVQEDSDQSITQAKPVKSDAA 308 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 T + E S+RV EK+D LINL+GELV + A ++S + S+ Sbjct: 309 VAKSAANETVNREQKSLRVDAEKLDTLINLIGELVTAGAGCALQASSH---ADSAMQESV 365 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 +L +++++ + +RM+P+ F R+ R+VRD+A +LGK+++L + G TELDKS++ Sbjct: 366 SRLNGLLEEVRDAALKLRMVPIGNTFIRFQRVVRDVAKELGKEIQLDIHGGDTELDKSVV 425 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 E+I DPL HL+RN++DHGIE+PEKR GKN G + L+A H GNI +E+ DDG GL+ Sbjct: 426 EKIGDPLMHLIRNAMDHGIEMPEKRREQGKNHSGQITLNAYHDSGNIVLEIIDDGKGLDA 485 Query: 428 ERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 E++ KA +GL + ++ DE+ LIF PGFS A++V+++SGRGVGMDVV+RNI ++ Sbjct: 486 EKLRLKAIEKGLIDEHSVLTRDEMYQLIFEPGFSMAQEVSNLSGRGVGMDVVRRNINELR 545 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G VEI+S+ GTT+R++LPLTLAI+DG + V DE F++PL+AV E ++ Sbjct: 546 GRVEIESELSIGTTVRLILPLTLAIIDGFLIEVGDEEFVVPLDAVKECVELHHPVTKQGV 605 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 L +RG LP+++L K FN+ K + VV++Q+GG+ L+VD+L+G+ Q V Sbjct: 606 KVSSHLNLRGSVLPLIDLRKQFNL--NKQAPRRQNVVVVQTGGQMAGLVVDRLLGELQTV 663 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 +K L + + GIS +TILG+G +ALI+D+ L Sbjct: 664 IKPLGPIFENIQGISGSTILGNGDIALILDIPGL 697 >UniRef50_B8GZ93 Chemotaxis histidine kinase protein cheAI n=6 Tax=Alphaproteobacteria RepID=B8GZ93_CAUCN Length = 762 Score = 564 bits (1453), Expect = e-159, Method: Composition-based stats. Identities = 263/753 (34%), Positives = 378/753 (50%), Gaps = 101/753 (13%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++ TFF E +ELLAD+E LL ++ A D E +NA+FRA HSIKGGAG FG Sbjct: 1 MDELEAIKVTFFQECEELLADLEGGLLAMEEGAGDLETVNAVFRAVHSIKGGAGAFGLEP 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L H+ E LLD R G + ++ + L DI+ + + A + + D A+ + Sbjct: 61 LVRFAHVFETLLDAVRAGSVPNTVELAAVLLRASDILADHVSAARGLGDVDMAASAAMAA 120 Query: 122 ALRQLALE-------------AKGETPSAVTR-------------------------LSV 143 L Q E P+ + Sbjct: 121 ELEQWTDPNATPTAPAPVAAPTVAEEPAPAPALIGADDDAMDGDDLGFVFVPQTITVEAQ 180 Query: 144 VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT--------------DVV 189 A +E + S R KA E LL EL L + D Sbjct: 181 AADAELIPSNVWTVSIRPKSDLYRKANETALLLRELSRLGPIKATLDDSALPLLQNLDPE 240 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 + S L D E I V FV + E S + S + A A Sbjct: 241 AAFITWSVRLETDQDETAIREVFEFVDGDCDLEITRGEGSVEASIAALTAPAEPVAAVEP 300 Query: 250 VEREKTT-----------------------------------------------RSNEST 262 + + Sbjct: 301 IAPAPEPVEVAPPIAPPAAAPVAEVAPAVEAAKPAAAAPAAAAAAAPKATPVEVPGPGQS 360 Query: 263 SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVM 322 IRV E++D+LI+LVGELVI Q+MLAQR E +L + +L++ R++Q+SVM Sbjct: 361 VIRVDPERIDRLIDLVGELVINQAMLAQRVGEYGIAPSSNLAMGLDELEQLTREIQDSVM 420 Query: 323 SIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSL 382 +IR P++ VF R PRLVR++A GKQ L + G +TE+DK++IER+ DP+TH++RN++ Sbjct: 421 AIRAQPVKSVFQRMPRLVREVANMTGKQARLVMDGENTEVDKTVIERLSDPITHMLRNAI 480 Query: 383 DHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS 442 DHG+E PE+R AAGKN G + L+A H+ G I IEV+DDG G+NRER+ A +GL Sbjct: 481 DHGLESPEERKAAGKNPEGVVRLAALHRSGRIVIEVSDDGKGINRERVFGIAVKKGLIAP 540 Query: 443 E-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTI 501 + ++D+E+ LIF PGFSTAE+++DVSGRGVGMDVVKR++Q +GG + I S+ G G+T Sbjct: 541 DLQLTDEEIDNLIFLPGFSTAEKISDVSGRGVGMDVVKRSVQALGGRISISSRPGQGSTF 600 Query: 502 RILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPI 561 + LPLTLA+LDGM V VA E ++PL A++ESL+P+ ++ PL VL VR ++P+ Sbjct: 601 TLSLPLTLAVLDGMVVDVAGETLVVPLAAIVESLRPKPEEVRPLGPVGSVLAVRDSFVPL 660 Query: 562 VELWKVFNVAGAKTEATQGIVVILQS-GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 +++ T G+V++++ G R AL+ D + GQ QVV+K+LE NY++V G+ Sbjct: 661 IDVGLTLGYREESPHPTDGVVLLVEGEDGSRAALVADAIHGQRQVVIKSLEQNYQQVEGV 720 Query: 621 SAATILGDGSVALIVDVSALQAINREQRMANTA 653 +AATILGDG VALI+DV A + R + A Sbjct: 721 AAATILGDGRVALILDVDATINLRRREGGAPRP 753 >UniRef50_Q7NV36 Chemotaxis protein CheA n=2 Tax=Proteobacteria RepID=Q7NV36_CHRVO Length = 721 Score = 563 bits (1452), Expect = e-159, Method: Composition-based stats. Identities = 225/722 (31%), Positives = 353/722 (48%), Gaps = 79/722 (10%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + FF+E+ EL +E LL P E N +FR AH+IKG AG FG L Sbjct: 1 MDLSKAREVFFEESRELCDGLESALLDPVAHPPGDETYNLLFRTAHTIKGSAGIFGLDAL 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQE---------------------Q 101 H+MEN+L+ R G++ L+ D+I L L D ++ Sbjct: 61 VRFAHVMENVLERLRSGQVALSDDLITLLLACNDHLRRLLDASAVSDQMAQRDLPEGEPL 120 Query: 102 LDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTR--------------------- 140 L ++ QE A++ + +A EA G + Sbjct: 121 LAGLRRYQEGGASAGPAVAAGDAPVAAEAGGGDVETGSPYWQLSLRFHPDTFRHGFDPLS 180 Query: 141 --------------------LSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + + R + + E Sbjct: 181 FVRYLGGFGTLRDVTPVWRSWPPPQLLDVTECFIGFDLALETEEGRQRIADTFEFIAEDS 240 Query: 181 HLTTLTDVVKGADSLSA-----ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 H+ L AD L+ + E + EA++I V + + P Sbjct: 241 HIGILAPYAPLADYLAEAEALGEPLEEQLERWLARGALTPDEAERIRNGDVTDPVEDAAP 300 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 A + +S IR+ K+D+LIN VGELVI + + Sbjct: 301 DTQSAVPAAAQAPVGGAPARSGRGDSQYIRIEASKLDRLINRVGELVIASAGTKLIAQ-- 358 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 G+L+ S+ + +++ +++RM+P++ +FSR+PR+VR+++ +L K ++L + Sbjct: 359 -SRGDGELLESVAVINTLVESIRDDALTLRMVPVDEIFSRFPRMVREVSKQLNKAIQLEI 417 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G TE+DKS++E++ DPL H+VRN++DHG+E EKR AAGK G + L+A H G++ Sbjct: 418 KGGDTEIDKSMVEKLTDPLMHIVRNAVDHGLESAEKRRAAGKPEQGTVTLNAYHDAGSVV 477 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 +EV DDG G+NRE++LAKA +GL +SD E LIF PGFSTA+ V+D+SGRGVG Sbjct: 478 VEVKDDGGGINREKVLAKAIERGLVAEGRLLSDQETLQLIFLPGFSTADAVSDLSGRGVG 537 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVKRNI+ + G +EIQS+ G G+T R+ LPLTLAI+DG V V + ++PL+ ++E Sbjct: 538 MDVVKRNIEALRGEIEIQSQPGVGSTFRLRLPLTLAIIDGFRVEVNESALVMPLDMMIEC 597 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + E ++ R + +RG++LP V L ++F + A +VI+ G R + Sbjct: 598 VDMPEG---AMSQRARQVNLRGDWLPFVSLRELFGLPPAAHPE---YIVIVHYGEHRAGI 651 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN--REQRMANT 652 +VD+L+G+ Q V+K L ++ + GIS +TILG+G AL++D+ L RE+R+ Sbjct: 652 VVDRLMGEVQAVIKPLGEIFKSLRGISGSTILGNGKPALVLDIPQLIHHACRRERRLIRQ 711 Query: 653 AA 654 A Sbjct: 712 NA 713 >UniRef50_A8U609 Chemotaxis histidine kinase, CheA (Contains CheW-like adaptor domain) n=5 Tax=Lactobacillales RepID=A8U609_9LACT Length = 687 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 208/686 (30%), Positives = 341/686 (49%), Gaps = 53/686 (7%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + S + FF+E DE L + + +L L+ D+ ++ +FR+AH+IKG A T G+ Sbjct: 1 MDENSKYLDLFFEETDEHLQSLNEQVLELENNPEDSSIVDVMFRSAHTIKGMAATMGYDT 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + + TH MEN+ D ++ + + I L + D + + ++ ++ + + + Q Sbjct: 61 MAKLTHKMENVFDLLKQKIIPADATSIALIFDCLDTLSDLVEDLREENDAER-DITNLVQ 119 Query: 122 ALRQLALEAKG------------------------------ETPSAVTRLSVVAKSEPQD 151 L ++ E + V + Sbjct: 120 RLDHVSSGESALVEAVTVEQETGSLLNLSLEKVEDSDLMIIEAAKEDGYNAYVLAIRIDE 179 Query: 152 EQSRSQSPRRIILSRLK---------AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGD 202 E S + +++S+L+ G L ++ G + L V K + L D Sbjct: 180 ESSMKNARVYLVMSKLEQHGDVLYSEPGTEALENDDFGTIFKLIYVSKLDEETVLNLALD 239 Query: 203 IAE------DDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 +E I +++ + + + V + A QA + K Sbjct: 240 NSEIAEVLIQTIQQADDLLVQQAEKSQTEPQEKLVEEQEIVELVEATQATAKAPGKAKAQ 299 Query: 257 RSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARD 316 + SIRV + K+D +NLV ELVI ++ L S D + ++ + + R + + Sbjct: 300 NHAMNQSIRVDIGKLDSFMNLVSELVIYRTRLEDLS---DQLLVSEMKEPLEHVARISSE 356 Query: 317 LQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTH 376 LQE V+ IRM P+ V +R+PR++RDL LGK+ L + G TELD++++ + +PL H Sbjct: 357 LQELVLKIRMQPVSTVMTRFPRMIRDLGNDLGKEFNLVIEGEDTELDRTVVSELSEPLVH 416 Query: 377 LVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAAS 436 L+RNS DHG+E+PE+RL GKN G + ++A +G + + +TDDG G+N I A A Sbjct: 417 LLRNSADHGVEMPEERLRLGKNPKGLIKITAYQEGNRVVLTLTDDGKGVNPVVIKASAER 476 Query: 437 QGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 +G +E MSD E+ LIF PGFSTA++VT +SGRGVGMD VK+ I ++GG VE++S G Sbjct: 477 KG-ISTEGMSDKEIQQLIFHPGFSTAQEVTSISGRGVGMDAVKQKITELGGTVELESIVG 535 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRG 556 GT +I LPLTL+I+ + V+V F +PL + ++ +E D+ + E V + G Sbjct: 536 KGTVFKINLPLTLSIIQSLLVKVGQATFAIPLGIIKTIVKVKEEDIIRVHNRE-VYKYEG 594 Query: 557 EYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRK 616 +P+V L K +V A TE + +V+++ G AL VD L+ Q ++V+K L Sbjct: 595 LAVPVVRLHKALDV--AVTEESNLHLVLVKQGDNYNALAVDDLVRQQEIVIKKLGQELNM 652 Query: 617 VPGISAATILGDGSVALIVDVSALQA 642 + ATILGDGS+ LI+D SA+ Sbjct: 653 LKNYLGATILGDGSIVLILDASAICN 678 >UniRef50_C6MCZ2 CheA signal transduction histidine kinase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCZ2_9PROT Length = 728 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 284/726 (39%), Positives = 407/726 (56%), Gaps = 79/726 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D+ FY+ FF+E+ ELLADME LL L +PD E LNAIFRAAHSIKGGAGTFGF+ Sbjct: 1 MSTDLEQFYEIFFEESSELLADMEACLLRLDVNSPDLEDLNAIFRAAHSIKGGAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+GE+++ +++++ FL+ D+++ QL ++ + D + IC Sbjct: 61 DMTEMTHMLETLLDRLRKGELEVRSEMVDAFLKAGDVIKAQLAGHRGEGQADPTVAEAIC 120 Query: 121 QALRQLALEAKGETPSA-------VTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + L++L+ + + TR +V++ S I E Sbjct: 121 EELKRLSEDPQETLSIVDTKTVFFETRTKLVSQEADVASGIDKVSHENIATGLSFIIEFS 180 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIA------------EDDITAVLCFVIEADQI 221 ++ L L ++G L + P + E+++ L FV++ + Sbjct: 181 SMDLTSAALENLFSNLRGLGDLENLTPANAEGHYKLALTTSSSEENVWETLAFVVDPTSL 240 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGR---------------------VEREKTTRSNE 260 E + +++ E R+ E Sbjct: 241 KIEATTNDGTSTKVAEIEILNESVRDAGVLVEEDELACKTPSAPGYGFFPGAPAAPRNIE 300 Query: 261 STSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQES 320 + I + ++ + E +T + ++ + S+ ++ + + E Sbjct: 301 DSEINLDQAQLPNTCSNKNESQVTNKSSGKTNTAASVSETSSIRVSIEKVDQMINLVGEL 360 Query: 321 VMSIRMMP----------MEYVFSRY-----------------------------PRLVR 341 V++ M+ E ++S PR+VR Sbjct: 361 VITQAMLAQTASQYDPVLFEKLYSGMSQLERNTRDLQESVMSIRMMPISFVFSRYPRVVR 420 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DLA KL K+VEL VG +TELDK LIE+I DPLTHLVRNSLDHG+E+ EKR+AAGK + G Sbjct: 421 DLAAKLNKRVELRTVGENTELDKGLIEKIADPLTHLVRNSLDHGVEVAEKRIAAGKPAQG 480 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFST 461 + L A HQGG+I IEV+DDGAGLNR +ILAKA +GL V + M+D EV +LIF GFST Sbjct: 481 TITLRAFHQGGSIVIEVSDDGAGLNRGKILAKAKERGLPVHDAMTDQEVWLLIFEAGFST 540 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 A+QVTDVSGRGVGMDVVKRNIQ MGG ++I+S G+GT I I LPLTLAILDG+SV V D Sbjct: 541 ADQVTDVSGRGVGMDVVKRNIQSMGGRIDIESTLGSGTRISIRLPLTLAILDGLSVVVGD 600 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 ++FI+PLN + ESLQP D+ ++G RV++VRGEYLP++ L + FN+ TE +GI Sbjct: 601 QMFIVPLNYITESLQPAATDIKTVSGQGRVVQVRGEYLPVIALHEFFNLRPNVTEIHKGI 660 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +VIL++ G + AL VD L+GQHQVV+K+LESNYR+V G S ATI+GDG VALI+D +AL Sbjct: 661 LVILEAEGHKAALFVDDLVGQHQVVIKSLESNYRRVQGASGATIMGDGKVALILDAAALV 720 Query: 642 AINREQ 647 ++++ Sbjct: 721 MASQQE 726 >UniRef50_Q2LSL2 Chemotaxis protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSL2_SYNAS Length = 735 Score = 562 bits (1449), Expect = e-158, Method: Composition-based stats. Identities = 214/642 (33%), Positives = 340/642 (52%), Gaps = 60/642 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F E E + ++E ++L L+ + + +NAIFR HSIKG A ++E Sbjct: 151 DESLLRDFIAEGMEYVEEIEVNILNLENNPENRDYINAIFRPFHSIKGVASFLNLEKIRE 210 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H +E+LLD+AR GE + +I++ L+ D ++ + + +AL Sbjct: 211 LSHNIESLLDKARNGEHSVTPPLIDVVLDGADALKSMI--------------SRLKEALE 256 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 K E P V ++ LE + ++ Sbjct: 257 -----GKKENPLDV--------------------------------DLSALEMRIHNINK 279 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + L IL D VL + + + + ++ + + A Sbjct: 280 GIEQEPSVKKLGEILIDDG-------VLSEQMLEEGLKAKENNPEKRLGETLIKERAVTP 332 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + R++ + + ++IRV K+D LI++VGELVITQSM+ Q S + + DL Sbjct: 333 KQVSQALRKQAEQITDMSTIRVDTRKLDDLIDMVGELVITQSMVQQNISNQEN-GNKDLA 391 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 ++ QL R +LQ+ S+RM+P++ F R RL RD++ +GK V + + G TELD+ Sbjct: 392 RNVSQLFRITSNLQKVSTSLRMIPIKQTFQRMARLARDVSKNVGKAVVVEMEGEDTELDR 451 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ I +PL H++RNS+DHG+E PE+R+ GK G + L A H+GGN IE++DDG G Sbjct: 452 NMVDEIYNPLVHMIRNSVDHGLETPEERVRCGKPEKGLIQLKAYHRGGNFVIEISDDGRG 511 Query: 425 LNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 LNRE+IL KA L E ++D E+ +IF PGFSTAE+VTDVSGRGVGMDVV++ I+ Sbjct: 512 LNREKILKKAIQNHLVNSVEGLTDQEIYRMIFLPGFSTAEKVTDVSGRGVGMDVVRQTIE 571 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 K+ G +EI+S G GTT PLT+AI+DGM V+V E FILP A+ + L+P + Sbjct: 572 KLRGKIEIESIPGKGTTFITRFPLTMAIIDGMIVKVGKERFILPTTAIRQVLRPTRESHN 631 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 + G + V G +P+V ++ +F++ K + IV+++ R LLVDQ+IG+ Sbjct: 632 HIVGQGETVNVMGRLMPLVRVYDLFDIEPEKVDPWDAIVIVVDGASRSKCLLVDQIIGKA 691 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 +VV+K+L + + GIS I+GDG + LI+D L ++ Sbjct: 692 EVVIKSLGEGLKDIDGISGGAIMGDGQIGLIIDPEGLFELSE 733 >UniRef50_C2ED86 Histidine kinase n=1 Tax=Lactobacillus ruminis ATCC 25644 RepID=C2ED86_9LACO Length = 681 Score = 561 bits (1447), Expect = e-158, Method: Composition-based stats. Identities = 204/688 (29%), Positives = 356/688 (51%), Gaps = 50/688 (7%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M+ D S + FF+E+D+ L + +L L+ E + + +N+IFR AH++KG + T G+ Sbjct: 1 MADDNSVYRDLFFEESDDNLQTLNDSILELEQEPDNIDLINSIFRVAHTLKGMSATMGYD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 V+ + TH ME++ D + G+M++NTD I+L + D +QE +D + +E + + + Sbjct: 61 VMTKLTHKMEDMFDLFKTGKMKINTDHISLVFKCLDKLQELVDDLRDDKELEESQITDLW 120 Query: 121 QALRQLALEAKGETPS--------------------AVTRLSVVAKSEPQDEQSRSQSPR 160 L ++ A VV ++ + + + R Sbjct: 121 NELDRVESSAGAGEAEAPAPVEEHDEGALSTKFERYDDADTDVVNDAKAGGMNAYTIAIR 180 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS-----------------------A 197 + LK V L+ E L + AD L Sbjct: 181 LDKDTMLKGPRVFLITEHLEKDGEIIRTEPSADLLEDGDFDTDFRMIYLTKDSVDDVKNI 240 Query: 198 ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTR 257 I + I ++ E E K + + + + Sbjct: 241 IESNTEIDSYIVEEFKEPAAEEEKAEEKTETEEKKTEEKPAEEKKPAEKKPAAKTQAPAH 300 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 ++ +IRV + ++D+ +NLV E+V+ ++ L ++ + G++ S+ Q+ R +L Sbjct: 301 KAKNQAIRVDLTRLDRFLNLVSEIVVYRNQLEDATNR---ESIGEIRDSLEQVSRLTSEL 357 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 Q+ V+ IRM + VFSR+PR+VRDL+ +L K+++L ++G TELDK+++ + +PL HL Sbjct: 358 QDLVLKIRMQQVSVVFSRFPRMVRDLSNQLNKEMKLEIIGEETELDKTVVSELSEPLIHL 417 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RNS DHGIE PE R GK VG + L+A +G + I ++DDG GL + I A A + Sbjct: 418 LRNSADHGIEDPETRKKLGKPEVGTITLAAYQEGNKVLITLSDDGKGLKPDVIKASAEKK 477 Query: 438 GLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 G + M+D E+ ML+F PGFSTA+++T++SGRGVG+D V+ I ++GG +E+ SK Sbjct: 478 G-IDTTGMTDRELQMLVFHPGFSTAKKITNISGRGVGLDAVQAKIAELGGSIEMDSKVDV 536 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GTT I LPLTL+I+ + V++ E F +PL+ V + RE D+ + + V + + Sbjct: 537 GTTFIIKLPLTLSIIQALMVQIGKESFAIPLDVVERVVMVREKDIMQTSN-QEVCKFQEG 595 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 +PI+ K+ V + ++ + +I++ G + Y +LVD+++GQ ++V+K ++ +K+ Sbjct: 596 LIPIIRTDKLLQVPSSSSD--KKYAIIVKIGKQYYGVLVDKMVGQQEIVIKKIDPMLQKI 653 Query: 618 PGISAATILGDGSVALIVDVSALQAINR 645 ATILG+GS+ALI+DV+A+ + Sbjct: 654 KKYQGATILGNGSIALILDVNAICNSRQ 681 >UniRef50_Q1GMD6 Chemotaxis protein n=11 Tax=Rhodobacterales RepID=Q1GMD6_SILST Length = 711 Score = 561 bits (1446), Expect = e-158, Method: Composition-based stats. Identities = 221/675 (32%), Positives = 357/675 (52%), Gaps = 52/675 (7%) Query: 22 DMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEM 81 M++ L ++ D E +NA+FRA HSIKGGAG FG L H E + DE R ++ Sbjct: 19 AMDEGLTAIEGGDHDPEVVNAVFRAVHSIKGGAGAFGLDDLVAFAHKFETVFDEVRSNKL 78 Query: 82 QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ---ALRQLALEAKGETPSAV 138 QL+T +I L L D + + + + D D + E P + Sbjct: 79 QLDTKLIQLLLRCSDHLSDLVSVSRDGGSVDEEHNDVLIAGLEEYLDEEEEELTFEPMGL 138 Query: 139 TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT------------ 186 SV ++E++ R + E L + L L L Sbjct: 139 GGPSVPLPLAMEEEKTYEIRFRPLKEMFGTGNEPFFLFQALSELGPLEVVLDDTELPGFD 198 Query: 187 --DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE----------------- 227 + + + L + + AV FV +++ + + Sbjct: 199 AMAMDDSYLAWNLTLTTTEPKSAVEAVFEFVEGLCELSITSDKDEEEDAAALAALNAAFG 258 Query: 228 -----VSPKISTPPVLKLAAEQAPTG-----------RVEREKTTRSNESTSIRVAVEKV 271 P+ P + AE P + E K+ + ++RV +E+V Sbjct: 259 VPGDSAEPETPAPFDVPAPAEATPMATSETTQKVETVKPESNKSEQRGPKPTLRVDLERV 318 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D+LIN VGEL+I SMLAQ+ + LD + D+ T + + ARD+QE VMSIR P++ Sbjct: 319 DRLINAVGELIINHSMLAQQIANLDVADLRDVETELEGFKNLARDIQEGVMSIRAQPVKP 378 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 +F R R+VR+ + K +L G +TE+DK++IER+ DPLTH++RN++DHGIE PE Sbjct: 379 LFQRMARIVREASSATEKSAKLITEGENTEVDKTVIERLSDPLTHILRNAVDHGIEKPED 438 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEV 450 R AAGKN G + LSA H+ G++CIE+ D+GAG+NR R+ A +GL +++D E+ Sbjct: 439 REAAGKNRTGEIRLSASHRSGSVCIEIKDNGAGINRPRVKQIAIEKGLIPENADLTDAEI 498 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 L+F PGFSTA++V+++SGRGVGMDVVK + +GG + + S G G+T I+LPLTLA Sbjct: 499 DNLLFLPGFSTAKEVSNLSGRGVGMDVVKNAVTALGGRINVSSTPGKGSTFTIILPLTLA 558 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 ++DGM V VAD+ ++P+ +++E+++ + ++ L +L +RG ++PI ++ + Sbjct: 559 VMDGMVVSVADQTMVVPITSIIETMRGSDDMINSLGADGTLLSIRGNFVPICDVAGALGL 618 Query: 571 AGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDG 629 + + G+ +++++ G+R AL VD + Q QVV+K+L+ +PG++AATILGDG Sbjct: 619 RKPEGDKPPGVYLLVETETGQRSALAVDDIHDQRQVVIKSLDGVCGNIPGVAAATILGDG 678 Query: 630 SVALIVDVSALQAIN 644 +A+I+D ++ A + Sbjct: 679 KIAMILDSESIIAAS 693 >UniRef50_A5G5U7 CheA signal transduction histidine kinase n=22 Tax=Proteobacteria RepID=A5G5U7_GEOUR Length = 712 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 243/713 (34%), Positives = 368/713 (51%), Gaps = 75/713 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA ELLA++E LL L+ D E + +FRA H+IKG FGF + Sbjct: 2 MDQHREAFKEEAYELLAELETSLLELEERPDDEELIGRVFRAMHTIKGSGAMFGFDDIAA 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E + D R G++ + +IN+ L +D ++ LDA + DA + I L+ Sbjct: 62 FTHQVETVFDLVRNGKVSVTKKLINVTLAARDQIKAMLDASTGGEPVDAGVAEEIIAELK 121 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQD---EQSRSQSPRRIILSRLKAGEVDL------L 175 L + K P A + + Q Q + I G L Sbjct: 122 SLLSDTKALAPLAGANATGTTQEPGQGRDLPQPTTTPVTYRIRFEPDRGLFARGTNPITL 181 Query: 176 EEELGHLTT--------------LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 ELG L D IL D I V FV + ++ Sbjct: 182 VNELGELGECKVVAQMCNLPRLDEIDPESCYIFWDVILTTAQGIDAIKDVFIFVEDDCEL 241 Query: 222 TFETVEV--------------------------------------------SPKISTPPV 237 E ++ + + + Sbjct: 242 KIEVIDTGGHLGHDGDYKKLGEILVERGDLTHEAMEKILSQQKRFGEIAVETGLVEADRI 301 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 EQ V +E+ ++ ++SIRV EK+D L+NLVGELV Q+ L+Q S+ Sbjct: 302 ASALVEQQHVKEVRQERQSQ-ETASSIRVPAEKLDILVNLVGELVTVQARLSQTSA---G 357 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 +L++ +++R +L+++ ++IRM+P+ FS++ RLVRDL+ +LGK+VE+ G Sbjct: 358 RRDAELMSIAEEVERLTAELRDNALNIRMLPIGSTFSKFKRLVRDLSNELGKKVEMETAG 417 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 + TELDK++IE++ DPL HL+RNS+DHGIELP+ R AAGK G + L+A H G ++ I Sbjct: 418 AETELDKTVIEKLNDPLVHLIRNSIDHGIELPDVREAAGKPGQGTVHLAAVHSGDSVLIT 477 Query: 418 VTDDGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 + DDGAGL++E I KA +GL + ++S+ E+ LIFAPGFSTA++V+ VSGRGVGMD Sbjct: 478 IRDDGAGLDKEAIRTKAIEKGLIPAAADLSEKEIFNLIFAPGFSTAKKVSSVSGRGVGMD 537 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVKR I + G ++I SK G GTTI + +PLTLAI++ + VR+ + F+LPL+ V E ++ Sbjct: 538 VVKRAIDALRGSIDITSKHGDGTTITVKIPLTLAIIESLLVRIGADRFLLPLSLVDECVE 597 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 AD+ A G + VR +P + L + F++ G + Q +VI + G R ++V Sbjct: 598 LTRADVEK-AHGRNLATVRDHMVPYIPLRERFDIKGETPDIEQ--IVITKVDGMRVGVVV 654 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 D +IG+HQ V+K+L Y+ V IS ATILGDG+VALI+D+ L +R Sbjct: 655 DHVIGEHQTVIKSLGRAYKNVDAISGATILGDGAVALIIDIPQLVHDVEMERA 707 >UniRef50_C7I593 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=C7I593_THIIN Length = 746 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 244/752 (32%), Positives = 363/752 (48%), Gaps = 110/752 (14%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAP---------DAEQLNAIFRAAHS 49 MS + + ++F EA ELL ME+ L+ L+P+ D E +NA+FRAAH+ Sbjct: 1 MSFEQQMQQAMRSFIVEAQELLEGMERGLMELEPQGSADDVNDEALDGEHINALFRAAHT 60 Query: 50 IKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ 109 IKG AG FG + TH +E++LD+ R G++ ++++++ L L+ +D + + +D Sbjct: 61 IKGSAGLFGLDGIVRFTHHLESVLDQMRAGKLAVSSELVALLLQGRDHLAQLIDQIDSQG 120 Query: 110 E--PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR------------ 155 D + L+ A G A + + Sbjct: 121 ACIADTPEEQALVVRLQAAQQPAGGALVVAHQSPIARGPASAEAAPVTVVAHGSALTPSW 180 Query: 156 -------------SQSPRRIILSRLKAGEVDLLEEELGHLTTLT--DVVKGADSLSAILP 200 P I GE+ L L L D Sbjct: 181 HLSLRFGADSLRNGMDPLAFIRYLRGLGEIVGLVTLTDALPPLDAMDAETSYLGFEINFK 240 Query: 201 GDIAEDDITAVLCFVIEADQITFETVEVS----------------------------PKI 232 + ++++I AV FV E I + Sbjct: 241 SEASKEEIAAVFEFVQEDSTIRILPAHSRIADYVQLIRSLPEDDLRLGDILVQIGTLTQK 300 Query: 233 STPPVLKLAAEQAPTGRVERE--------------------------KTTRSNESTSIRV 266 L + TG K RS ++ +RV Sbjct: 301 ELSDALSAQHDAQATGAPAAPLGEILVREGATHQPIVQAALDKQKQIKDKRSRDNQMLRV 360 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 A +K+D LINLVGELVI + A + + + Q+ R D++E + +RM Sbjct: 361 AADKLDALINLVGELVIASAGNALHAQNASQI------EAAAQITRLVEDIRERALKLRM 414 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 + + F+R+ R+VRD++ +LGK + L + G+ TE+DK+L+ERI DPL HLVRNS+DHGI Sbjct: 415 VEIGETFARFQRVVRDVSRELGKDIALVIEGADTEMDKTLVERIADPLMHLVRNSIDHGI 474 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE--- 443 E PE R A GK + G L L+A H G+I I V+DDG GLNRERILAKA +GL +E Sbjct: 475 ESPEVRTARGKPAQGTLKLAARHDSGSILITVSDDGGGLNRERILAKAVERGLISTEAAA 534 Query: 444 NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 + D EV LIF PGFSTA+ VTD+SGRGVGMDVVKRNI+ + G ++IQS G GT + + Sbjct: 535 ALPDAEVWALIFEPGFSTADAVTDLSGRGVGMDVVKRNIEAIRGSIDIQSSAGVGTQMHL 594 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLTLAI+DG V+ A F+LPL+AV+E ++ A + + +RGE LP++ Sbjct: 595 RLPLTLAIIDGFLVQAAGRTFVLPLDAVIECMEFAPAQ-----PQQGYINLRGEVLPLLH 649 Query: 564 LWKVFNVAGAKTEA--TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGIS 621 L + + + ++ T+ VV+ Q GG+R ++VD L+G++Q V+K L + + + GIS Sbjct: 650 LREQLGLTDSAADSPNTRSNVVVAQIGGQRAGIVVDALLGEYQTVIKPLGALFAHLQGIS 709 Query: 622 AATILGDGSVALIVDVSALQAINREQRMANTA 653 +TILG+G VALI+D + L + A Sbjct: 710 GSTILGNGEVALILDAAPLISRASRSAQGRQA 741 >UniRef50_C7NX21 CheA signal transduction histidine kinase n=1 Tax=Halomicrobium mukohataei DSM 12286 RepID=C7NX21_HALMD Length = 649 Score = 560 bits (1443), Expect = e-158, Method: Composition-based stats. Identities = 198/655 (30%), Positives = 320/655 (48%), Gaps = 28/655 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F E++E + ++ LL L+ + D E + +IFR AH++KG G GF Sbjct: 3 DQYLDAFIRESEEAITELNNSLLDLESDPEDTEAMESIFRTAHTLKGNFGAMGFDDASSL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E+LLDE R G M + D+++L D ++ + ++ E D I LR Sbjct: 63 AHAIEDLLDEMRDGNMPVTPDVMDLIFAGVDKIEAIVSEIEEHGE-SGTDVDEIVDDLRT 121 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQ----------DEQSRSQSPRRIILSRLKAGEVDLL 175 + E A ++ D + + A E+D+ Sbjct: 122 VLEEGVDAAEGAADDADGPDEAPDDTTDTDSSGDGDVAVETNVSPDTADDSIIAAEIDIG 181 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCF-------VIEADQITFETVEV 228 + ++ + + + D + E + + + Sbjct: 182 DSDMLGVDAMLAIEAVEDYFDVLDAAPQREAVEDGEFSDTFTLYLDAEDTGTVDNTLSGI 241 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 S A +G E + +E S+RV V+++D L LV +LV ++ L Sbjct: 242 GKIESAETADVTDALSEKSGSTSDETEHKVDEIKSVRVDVDQLDDLHGLVEQLVTSRIKL 301 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 + + D G+ ++ +L + +LQ +VM +R++P++ V ++PRLVRDL+ LG Sbjct: 302 RRAVEQDDLDGAGE---NLNELDKITANLQNTVMDMRLIPLKKVVGKFPRLVRDLSRDLG 358 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K+V+ + G ELD++++ I DPL H++RNS+DHGIE PE R GK G + L A Sbjct: 359 KEVDFEIEGEDIELDRTILTEISDPLMHILRNSVDHGIEPPEVREEKGKPRTGTVELRAS 418 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQV 465 + ++ I+V DDGAGL+ E I KA +G+ E M D + L+F PGFSTA+QV Sbjct: 419 RERDHVIIQVEDDGAGLDVEAIRDKAIEKGVRSPEELEAMDDSSIYDLVFHPGFSTADQV 478 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 TD SGRGVGMDVV + ++ G V ++S G GTT+ + LP+T+AI+ + V V DE + Sbjct: 479 TDTSGRGVGMDVVHDTVTQLDGSVNVESTPGEGTTVSLRLPVTMAIVKVLFVEVGDEEYG 538 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVIL 585 +PL V E + AD G+ V++ E PI++L + F+ G +T G++V + Sbjct: 539 IPLKNVDEITR---ADDRKQVNGKDVIKHNDEIYPIIQLGETFDAPG-ETANGDGMLVRV 594 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 + R+ AL D + Q +VVVK LE PG+S +LGDG++ I+DV L Sbjct: 595 RESERQVALHCDSVNSQEEVVVKPLEGILSGTPGLSGTAVLGDGNIVHILDVVTL 649 >UniRef50_B3E3M0 CheA signal transduction histidine kinase n=8 Tax=Desulfuromonadales RepID=B3E3M0_GEOLS Length = 701 Score = 559 bits (1442), Expect = e-158, Method: Composition-based stats. Identities = 213/690 (30%), Positives = 346/690 (50%), Gaps = 52/690 (7%) Query: 11 TFFDEADELLADMEQHLLVL----QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 F EA+E++ ++ L L + A + + LNAIFR AHS+KG AG FGF ++ ET Sbjct: 14 DFLAEAEEIVEELGTQLADLADMAEKGAWEPDLLNAIFRGAHSLKGLAGMFGFGMIAETA 73 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H ENLLD R G++ L ++ L + +++ L A D A Sbjct: 74 HHAENLLDWLRMGKISLTPAVLELLFSSAELLTTLLRACVDG-TLDQHQAAASAHASAIA 132 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA----------------- 169 A E +A L + S+ R+ + K Sbjct: 133 ACLNPAEPVTAAPLLEQLGLSDSLMGALTEYEEHRLKENCSKGRHIYVVHASFELTTFDQ 192 Query: 170 ------GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 + E + L ++ + ++ + D E +++A+L + + + Sbjct: 193 GLAELTDILKGCGEVISTLPSVGERIETHIDFDLLTGTDRNEQELSALLKHLDVSILLAG 252 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVER------------------EKTTRSNESTSIR 265 + + P E E + + S ++R Sbjct: 253 APKGDAKAAALPDRADFQPVAVTASASETADTPVVLPASELPGASPDEAFSAKSMSRTVR 312 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG----DLITSMGQLQRNARDLQESV 321 V + K+D+L+N+VGELV+ S ++ ++ + DL + L+R DLQ+ V Sbjct: 313 VDIGKLDELMNIVGELVLAHSSISSIANRMRTEGFSRMAIDLGKAAKGLERRLTDLQKGV 372 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 M IRM+P+ ++ + R+VR ++ + GK++EL L G+ TELDK ++E I DPL H++RN+ Sbjct: 373 MDIRMIPVGQLYEKMSRIVRKISREQGKKIELKLYGAETELDKLIVEDIADPLMHIIRNA 432 Query: 382 LDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV 441 +DHGIE PE+RLAAGK+ G + LS+ +G ++ IEV DDGAG++ E++ KA S+GL Sbjct: 433 IDHGIESPERRLAAGKDERGTVRLSSFQKGNHVVIEVEDDGAGIDLEKVKQKALSKGLVQ 492 Query: 442 S-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTT 500 MSD E LIF PGFSTA+ +TD+SGRGVGMDVV+ NI + G V+I+++ G G+ Sbjct: 493 DINGMSDREALDLIFMPGFSTADTITDISGRGVGMDVVRNNIAAVSGMVDIETRLGQGSR 552 Query: 501 IRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLP 560 I+LP+TLAI+ + + A + +P+ +V+ESL AD+ + G+ V+ +R + LP Sbjct: 553 FTIILPITLAIIKALIIFCAGRTYAIPITSVVESLILEPADIKTVE-GKEVINLREQTLP 611 Query: 561 IVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGI 620 ++ L ++F V + VV++ S +R ++VD L+GQ +V+K L +R + GI Sbjct: 612 LLRLERLFRVERVGINPGEQYVVVVGSAEKRLGIVVDDLLGQQDIVIKPLGPAFRTLRGI 671 Query: 621 SAATILGDGSVALIVDVSALQAINREQRMA 650 S A LGD L++D + A A Sbjct: 672 SGAADLGDQRTILVLDAGGIIAETMRGSGA 701 >UniRef50_A5G689 CheA signal transduction histidine kinase n=1 Tax=Geobacter uraniireducens Rf4 RepID=A5G689_GEOUR Length = 671 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 202/658 (30%), Positives = 354/658 (53%), Gaps = 23/658 (3%) Query: 11 TFFDEADELLADMEQHLLVLQPEAP----DAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 F EA+E++ + L+ L A + + +N+IFR AHS+KG AG FGF+ + E + Sbjct: 14 DFLAEAEEIIDQLSLDLVALSDCADGGDFNPDLVNSIFRGAHSLKGLAGMFGFTDIAELS 73 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H MENLLD R G++ L+ + I++ E+ +++ + + + + + + Sbjct: 74 HNMENLLDSLRLGKVSLSQNTISVLFESMELLGTLVQSAGTADRQLHDISQAVARISSCV 133 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV---DLLEEELGHLT 183 K E+ S + +L + + + + + + L L Sbjct: 134 CAVQKEESVSPLAKLGLSERVLGSLTEYEEHRLLENVKKGRRIFSILASFSLATFDQDLG 193 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI---------ST 234 LTDV+K A + + LP + + + +++++ E + + + Sbjct: 194 ELTDVLKSAGEVISTLPSAGGGLESSINFEILFGSEKVSAEVTALIDRDNITVMLLGGES 253 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE 294 P E AP+ E T +S S ++RV + K+D+L+N+VGELV++ S ++Q + Sbjct: 254 PSQPAEMQEMAPSLAPEASMTAKS-MSRTVRVDISKLDELMNIVGELVLSHSTISQLAGR 312 Query: 295 LDPVNHG----DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + + +L + L+R +LQ+ VM IRM+P+ +F + R+VR ++ + GK+ Sbjct: 313 MRLDGYSAPSIELTKAAKGLERKLTELQKGVMEIRMIPVGQLFEKMARIVRKISREQGKK 372 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 VEL + G+ TELDK +IE I DP+ H++RNS+DHGIE PEKR+ AGK+ G + LS+ + Sbjct: 373 VELKMFGADTELDKLIIEDISDPMMHIIRNSIDHGIETPEKRILAGKDEKGVIKLSSYQK 432 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVS 469 G ++ I+V DDGAG++ E++ KA +GL S E + D E LIF PGFST+++V+++S Sbjct: 433 GNHVVIQVEDDGAGIDIEKVKRKALEKGLIPSIEAIHDKEALDLIFLPGFSTSDKVSEIS 492 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV+ NI + G V+++S G G+++ I LP+TLAI+ + + + LP+ Sbjct: 493 GRGVGMDVVRTNIAALSGMVDVESYPGEGSSMIITLPITLAIIKALIISSVGRTYALPIT 552 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 +V+E++ D+ + + V+++R LP++ L K F + VV++ + Sbjct: 553 SVLETILVERKDVRTVE-KKEVIQLRENTLPLLRLGKFFETETQGEQQENFYVVVVGAAE 611 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +R ++VD L+GQ +V+K++ ++ GIS A LGD L++DV + Sbjct: 612 KRLGMVVDDLLGQQDIVIKSIGETFKGFKGISGAADLGDQRTILVLDVGGIINEAVRG 669 >UniRef50_A8ZVX2 CheA signal transduction histidine kinase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZVX2_DESOH Length = 694 Score = 559 bits (1442), Expect = e-157, Method: Composition-based stats. Identities = 219/707 (30%), Positives = 338/707 (47%), Gaps = 69/707 (9%) Query: 1 MSMDISDFYQTFFDEADE-LLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 M+ + S Q F +EA E LL ++E LL L D E +N FRA H++KG FGF Sbjct: 1 MTTE-SRVRQAFIEEAREELLPELESALLELGHAPEDMELINRAFRALHTLKGSGAMFGF 59 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 + E H +E + D R G ++ ++ L L KD Q +D A Sbjct: 60 DRISELAHELETIFDNVRNGSFAVDNRLVELTLAAKDRFQMLVDDPGLDGPEVVADLLVA 119 Query: 120 CQAL----------RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + + EA TP + +P+ + + +L L Sbjct: 120 FRQITAETMTGEDAAAGGPEAPEGTPDISAWSLYHIRFKPRPGIFATGTNPLFLLDELHE 179 Query: 170 GEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 + + + L + +L D ++ I V FV + + + Sbjct: 180 MGAARVVAHVESVPVLDAMDPECCYTWWDILLATDQGQNAIQDVFIFVEDECDLAIGLLT 239 Query: 228 V------------------------------------------SPKISTPPVLKLAAEQA 245 ++ V Sbjct: 240 DVLQPGREAPVFDRLAPVLLKDASIDIEGLRRMVSAEVVAGDRETDSASTAVKTGPGAVP 299 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 + +S+RV K+DQL+NLVGELVI Q+ L++ + + ++ Sbjct: 300 SAEAGVSAPAAPAKTISSMRVQARKLDQLVNLVGELVIAQTRLSRLVDQHEDAALSEIAE 359 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 ++R + DL+++ + IRM+P+ F ++ R+V D + + GK+V+L G++TELDK+ Sbjct: 360 V---IERLSNDLRDTTLDIRMLPIGSSFGKFKRVVWDFSAQKGKEVDLVTEGAATELDKT 416 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +IER+ DPL HL+RNS+DHGIE PE+R AGK G ++ SAEH GGN+ I + DDG G+ Sbjct: 417 VIERLDDPLVHLLRNSIDHGIETPEERERAGKPRHGRIVFSAEHAGGNVIITIADDGRGI 476 Query: 426 NRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 + E + AKA +GL S S+ EV IF PGFSTA Q++D+SGRGVGMDVV++NI Sbjct: 477 DPEAVRAKAVERGLLASGAAPSEKEVLNFIFEPGFSTAGQISDMSGRGVGMDVVRQNITA 536 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G V + S +G GTT+R+ +PLTLAI+DG+ +R+ E FI+PL V E L+ Sbjct: 537 LRGKVSVSSIKGQGTTVRMTIPLTLAIIDGLEIRIDREHFIVPLAVVSECLE-------H 589 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 E + +R + +P + L + F + G+ + Q VV+ R L+VD++IG Q Sbjct: 590 HRRREGFISLRDQLVPFLRLREWFGIEGSPPQHEQ--VVVASLEKRMVGLVVDEIIGLQQ 647 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 V+KNL Y+++ G+S ATI GDG +ALI+DV L +Q Sbjct: 648 AVIKNLGRAYKEIQGVSGATIQGDGGIALILDVEPLIQKAEQQGTER 694 >UniRef50_UPI00016C4560 CheA chemotaxis protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4560 Length = 818 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 224/647 (34%), Positives = 349/647 (53%), Gaps = 58/647 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F EA E L +++LLV+ + +A LNA++R H+IKG + G + +Q H Sbjct: 222 MIGDFCQEASEHLETADRNLLVIDGDPTNANALNAVYRGFHTIKGVSSMLGLAAVQMVAH 281 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 ENLL+ AR G+++L ++L + D ++ Q+ + Sbjct: 282 EAENLLNLARDGKVRLQGKPMDLVFASTDALKRQVQFIRA-------------------W 322 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 G ++VA+ + PR S V Sbjct: 323 STEGGRLAEDPALPALVAELRVAASGATEAPPRAAPKSVAPPAPVAAAAPAPAAEHVPAP 382 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 K P + Sbjct: 383 APKA-------------------------------------EKAEHAPAPAPAPKAEKAE 405 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 E R E ++RV +++D+LIN +GELVI QSM Q E+ + ++ Sbjct: 406 PAAEGAGLRRIPEKETVRVDKDRLDKLINTIGELVIAQSMAQQEFDEMSNGSGVG-SLAL 464 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 +L + +RDLQE +S+RM+P++ F + RLVRDL+ K+ K VEL L G TELDK+++ Sbjct: 465 PELAKISRDLQELSLSLRMVPLQGTFQKMARLVRDLSRKMNKPVELELHGEETELDKTVV 524 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 +++ DPL H+VRN++DHG+E P++R GK G++ L A HQGG++ IE+TDDG GL+R Sbjct: 525 DQLGDPLMHMVRNAVDHGLEDPDERTTVGKTREGHVELRAYHQGGSVFIELTDDGKGLDR 584 Query: 428 ERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 ERIL KA + + + ++D E+ LIF PGFSTA+ VTDVSGRGVGMDVV+RN++ + Sbjct: 585 ERILKKAVEKAIIAEGQRLTDPEIYALIFEPGFSTAKAVTDVSGRGVGMDVVRRNVEALQ 644 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLA 546 G++ I+++ G GTT I LPLTLAI+DG+ V + D+V++LPL +V+ES +P ADL +A Sbjct: 645 GNILIRTQAGKGTTFTIRLPLTLAIMDGLMVALGDDVYVLPLLSVVESFRPHPADLRRVA 704 Query: 547 GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVV 606 G + VRGE +P++ L ++F + + +G+VV+++ G+++A+LVD+L+GQ Q V Sbjct: 705 GHGEAVTVRGEVVPLLRLHQLFGRSARVEDPGRGLVVLVEDQGKKHAILVDELLGQMQAV 764 Query: 607 VKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 VK+L++NYR+V G++ ATILGDG VA+I+D+ L ++ + A Sbjct: 765 VKSLDANYRRVEGLAGATILGDGRVAMILDIHGLAQLHAQGGGALEP 811 >UniRef50_Q8PX97 Chemotaxis protein n=2 Tax=Methanosarcina RepID=Q8PX97_METMA Length = 671 Score = 557 bits (1435), Expect = e-157, Method: Composition-based stats. Identities = 195/675 (28%), Positives = 348/675 (51%), Gaps = 42/675 (6%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + +M LL L+ +AEQ+N +FR+AH+ KG A T GF + Sbjct: 1 MDMSKYIGIFRSESEKNIQEMSDSLLALEQNPENAEQMNILFRSAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-------------- 108 E TH ME+L+D +R G++ L++ +I++ E D ++ ++ Sbjct: 61 VELTHEMESLIDRSRTGKLTLDSYLIDILFECLDTLERLVEEVCAGMENKIVGREGDRSE 120 Query: 109 QEPDAASFDYICQALRQLALEAKG--------------ETPSAVTRLSVVAKSEPQDEQS 154 + I + LR + ++ + + V + + + Sbjct: 121 GSNSGPDAEKILETLRTINNPSEEYILQKNEFCTFSLDKGIEEKGKRQEVKEKTGEKTEE 180 Query: 155 RSQSPRRIILSRLKAGEVDLLEEEL-----GHLTTLTDVVKGADSLSAILPGDIAEDDIT 209 +++ + +EE G + + + + E Sbjct: 181 KAEEKEKGEKEEETEKTEGREKEETQKTKEGEKIEEREKGEKIEEREKGEKIEEREKGEK 240 Query: 210 AVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 E E E + + + + + +E T+S + S RV+ E Sbjct: 241 TEEDEERERKNAEKEEKEKAVEKEKEEETEGREKNEKERQSGKEVKTQSPKIHSSRVSTE 300 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 K+D+L+NLVGELVI +S + + + +L DL ++ Q+ R+LQE V+ IRM+P+ Sbjct: 301 KLDKLMNLVGELVINRSRVKELTGKL---KSKDLDFALSDYQKLTRELQEEVLEIRMIPL 357 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 +++ + +PR++RDLA K+++ + G ++D+++IE I DPL HL+RN++DHGIE P Sbjct: 358 DHITNIFPRMIRDLARGQNKKIDFIIRGKEIKIDRAIIEEIGDPLVHLLRNAVDHGIETP 417 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMS 446 EKR+ GK G +I++A Q + I + DDG G++ E I A + L +E +S Sbjct: 418 EKRVELGKEETGKIIITASRQQNYVLIRIEDDGKGIDAEEIRKIAFQRRLISRDEAEQLS 477 Query: 447 DDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLP 506 + E+ LIF PG STA +VTD+SGRGVGMD+VK I+ +GG +++ SK GTG+ + LP Sbjct: 478 ERELIQLIFTPGLSTASEVTDLSGRGVGMDIVKNRIEHLGGSIKVDSKPGTGSRFELRLP 537 Query: 507 LTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWK 566 +T+A+ M V+V E + +P +++S+ R+ D+ + E V+ + + LP++ L K Sbjct: 538 ITIALCQSMLVKVGMERYAIPFTNIIKSISVRKKDVRHIR-SEEVILINEKTLPLLRLRK 596 Query: 567 VFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL-ESNYRKVPGISAATI 625 +F + + E +VI++ G+ L+VD L+G+ ++++K K G + AT+ Sbjct: 597 LFQLPAIENE-ENLDIVIVEKAGQYIGLVVDSLLGKQEIIIKTFKSRLLEKTRGFAGATV 655 Query: 626 LGDGSVALIVDVSAL 640 +GDGSV LI+D++++ Sbjct: 656 MGDGSVILILDINSI 670 >UniRef50_Q311M2 CheA signal transduction histidine kinase n=3 Tax=Proteobacteria RepID=Q311M2_DESDG Length = 954 Score = 556 bits (1434), Expect = e-157, Method: Composition-based stats. Identities = 194/655 (29%), Positives = 316/655 (48%), Gaps = 62/655 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D F D + + L L ++ + ++A+FR+ +++ G G + Sbjct: 352 DPDDLNVFRDTVSQQFESIRIALAELSKDSSQKDFVDALFRSLVTVQNSCGYMGLEETKV 411 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 L+D+AR ++ + + +L + I+++ +DA Sbjct: 412 YAERTAKLVDQARSSDLDFSL-MTDLLEQECAILKDMVDA-------------------- 450 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 QL + + + A P Q+ P + + K + Sbjct: 451 QLTQLSSPAASTGADDAAEPAGDSPAARQAGKTEPPAAPVQKEKTAPAAAPAAKPAPAPR 510 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + + + Sbjct: 511 PS------------------------------AKPAPKPAAPKPAAPAKPAAAPQAGGAA 540 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH---- 300 P +++ + S++IRV EK+D L+NL+GEL+I ++ + L+ Sbjct: 541 QPPAGNDQQAVHKGKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEGETDVNVA 600 Query: 301 ---GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 +L + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+VEL + G Sbjct: 601 DVAQNLTETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVELIMEG 660 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TELDKS++E I DPL HL+RN++DHG+E E R+A GK G + L A H+G ++ IE Sbjct: 661 EETELDKSVVEVIGDPLVHLIRNAMDHGVEPEEDRIAKGKRPKGRVWLRAYHKGNSVAIE 720 Query: 418 VTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 + DDG G++ ER+ A ++G+ E + D E LIFAPGFS+AE +TD+SGRGVG Sbjct: 721 IEDDGKGIDPERMREVAVNKGIISPEEAKSLDDREAMELIFAPGFSSAETITDISGRGVG 780 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV+ NI+ + G V IQS+ G GT + LPLTLAI+D + V V+DE + +PL+AV E+ Sbjct: 781 MDVVRTNIKNLKGSVSIQSEIGKGTRFILSLPLTLAIIDALMVNVSDETYAIPLDAVSET 840 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 + L + + V +RGE L IV L ++ + G + VV++ RR L Sbjct: 841 TKIEAERLTDVNNRKAV-TLRGEVLGIVTLSELLGLEGTTEDDEVLSVVVIHDNDRRLGL 899 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 +VD+L+ + ++V+K L + GIS ATI+GDGSV LI+D + + + + Sbjct: 900 VVDRLLERQEIVIKPLGEYLGDLRGISGATIMGDGSVVLILDPHEIYLMATSKAV 954 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 51/210 (24%), Positives = 86/210 (40%), Gaps = 5/210 (2%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFMDPEIFADFILEAKEHLETIEPNLLELENSPDNLSLLNEIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + H EN+LDE R+GEM ++++I+++ L D +++ +D + + Sbjct: 61 LNRINSLAHKAENILDELRKGEMSVSSEIMDVILSATDALRQMIDNLDVTGQEGDVEIAS 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 I + + + P+ + + +D S S LE Sbjct: 121 IVEIIDAIMAGGGIAAPAPSASEEEQPREQQEDSSSDDDSADSSAAQSAAERVFVNLEPY 180 Query: 179 LGHL---TTLTDVVKGADSLSAILPGDIAE 205 L D V+ A +S L + E Sbjct: 181 ALTAFGEGHLRDFVEEARDISENLNAGLLE 210 Score = 97.2 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 79/181 (43%), Gaps = 3/181 (1%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEA-PDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F +EA ++ ++ LL L+ + + +N +FR H++KG +G GF+ L TH Sbjct: 190 LRDFVEEARDISENLNAGLLELETNPHAEGDLVNDLFRYFHNLKGNSGIIGFAELNSLTH 249 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALRQL 126 E LL++ R+GEM + +++L L D + ++ + D + + L++ Sbjct: 250 EAETLLNKVRKGEMPSSHALVDLLLVVVDYIDAMVERIDATTGVATPVRIDDLLERLQKA 309 Query: 127 ALEAKGETPS-AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 E + P+ + + PQ+ Q P + + ++++ + + Sbjct: 310 VTEGIIDAPARPAGQQTAAQPEAPQESAPAQQEPSSAVAPGVDPDDLNVFRDTVSQQFES 369 Query: 186 T 186 Sbjct: 370 I 370 >UniRef50_Q48768 Chemotaxis protein cheA n=29 Tax=Listeria RepID=CHEA_LISMO Length = 618 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 185/636 (29%), Positives = 347/636 (54%), Gaps = 27/636 (4%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F +EA E L + +LL L+ + + + ++ IFR+AH+ KG + T GF + + TH Sbjct: 5 MLDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSAHTFKGMSATMGFQQVADLTH 64 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 MEN+LDE R + + ++++ ++ + + + AA L L Sbjct: 65 AMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDIQHGGQ-GAADISKTVADLEALL 123 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 + ET V + +A + ++ + + G + E + Sbjct: 124 HPEQ-ETDLTVEKTYRIAIQIEEAAILKAVRAVMCLERLAEMG----IISETTPDREAIE 178 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 + + S +L +D+I AV+ + E +++T ++ P Sbjct: 179 LEEFEQSFEVVLESAQTKDEIKAVILDISEIEKVTVTEEVEEVQVIEPI----------- 227 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSM 307 + ++TT+ E+ +IRV +EK+++L+N+ E VI ++ + + + + N+ +L+ + Sbjct: 228 -KKAAKQTTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIA---EKTNNKELMEHL 283 Query: 308 GQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLI 367 G+ ++++Q ++++RM+P++ VF+R+P++VR LA +LGK+++L + G+ TE+DK +I Sbjct: 284 GRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGADTEVDKIVI 343 Query: 368 ERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNR 427 + I DPL HL+RNS+DHG E E R GKN + L A H G N+ IE+ DDGAG+N+ Sbjct: 344 DEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVIEIADDGAGINK 403 Query: 428 ERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 ++L KA ++ + M+D E+ L+F GFSTA+QV+D+SGRGVG+DVV+ I K Sbjct: 404 RKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGRGVGLDVVRNTILK 463 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG + ++S + G+T RI +PLTL+I+ M V ++ + +PL V E++ AD+ Sbjct: 464 IGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLANVAEAITINPADIQH 523 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 + G+ ++ R + +++L + F+ + + +++++++ R + L++ +IGQ + Sbjct: 524 VH-GKDLINYRETIIEVLDLGECFH-ETPLNDTDELLLLVVKNAKRTFGLIIKDIIGQRE 581 Query: 605 VVVKNLESNYRKVP-GISAATILGDGSVALIVDVSA 639 +V+K L + + S ATILGDG V LI+++ Sbjct: 582 IVLKTLGGFFSESQIAFSGATILGDGRVVLILNLET 617 >UniRef50_B3PCN6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PCN6_CELJU Length = 735 Score = 556 bits (1433), Expect = e-156, Method: Composition-based stats. Identities = 236/735 (32%), Positives = 361/735 (49%), Gaps = 91/735 (12%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ QTFF EA +LL ME LL L + D E LN +FRA H+IKG AG FG + Sbjct: 1 MNLDSALQTFFAEAADLLDVMEAALLRLDEDVEDRETLNELFRAVHTIKGSAGLFGLDDI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH +ENLLD AR G++ L+TD++++ L +D + +D + +Q D Q Sbjct: 61 VRFTHTVENLLDHARDGKITLSTDLLSILLPCRDHIVLLVDHARHNQTNDEQCLAQGQQL 120 Query: 123 LRQLAL-------------EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 L LA A S T + A SE + + R ++ + + Sbjct: 121 LASLAPWLGSSSSAQSSPTSAPVAAHSQYTPAAAGALSEKEAWHISVRLGRDLLRNGMDP 180 Query: 170 GEVDLLEEELGHLT------------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVI- 216 + LG +T D L ++ +I FV Sbjct: 181 LSIIRFLNTLGQVTHIATLADNLPPLEQYDPEDLYLGFEISLLSQASQQEIEDAFMFVRD 240 Query: 217 -------------------------------EADQITFETVEVSPKISTPPVLKLAAEQA 245 E + + + + A EQ Sbjct: 241 DSDIKIIPPRSNVQAYINLIKSLPENIHRLGEILVKSHAITYRELEDALAAQKQQAIEQK 300 Query: 246 PTGRVER-----------------------EKTTRSNESTSIRVAVEKVDQLINLVGELV 282 P R+ + S E+ IRV +++D+LINL+GELV Sbjct: 301 PVPRIGTILVDNQVVAAEIVDAAVDKQKTINERKNSPENRFIRVDADRLDKLINLIGELV 360 Query: 283 ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 I + + S L + +T+MG ++++ +++RM+P+ F ++ R+VRD Sbjct: 361 INRQRIDLLVSSLANPVLSEAVTTMGSF---TEQIRDAALTLRMVPIGETFHKFKRVVRD 417 Query: 343 LAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGN 402 A LGK+++L + G+ TELD+S++E++ DPL H+VRN++DHGIE R K + G Sbjct: 418 TARSLGKEIDLVIEGADTELDRSMVEKLNDPLMHIVRNAMDHGIESVHVRRERNKPAAGT 477 Query: 403 LILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFST 461 L L+A H GNI I ++DDG GL+ ERI KA + GL +S E+ LIF PGFST Sbjct: 478 LKLTARHDAGNIVIGISDDGGGLDVERIRKKAFANGLIDDSMQLSQQELFQLIFHPGFST 537 Query: 462 AEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVAD 521 AEQVT++SGRGVGMDVV+RNI+ + G ++I S+ G GT I LPLTLAI+DG V + Sbjct: 538 AEQVTNLSGRGVGMDVVRRNIEALQGGIDIDSELGAGTQFTIRLPLTLAIIDGFHVAASA 597 Query: 522 EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI 581 FI+P N ++E + + G+ + +RG+ +P + L +FN+ A+ E + Sbjct: 598 VDFIVPQNTILECVDLKS---LNHIQGQHCVNLRGDQVPYIRLRDIFNLPTAEVEREK-- 652 Query: 582 VVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +V++Q G +R L+VD+L G+ Q VVK + ++ + GI +++LG G+VALI+D+ L Sbjct: 653 IVVVQFGDKRAGLVVDELHGEIQTVVKPMGPIFQALKGIGGSSLLGTGAVALILDIQQLI 712 Query: 642 --AINREQRMANTAA 654 AI +EQ N A Sbjct: 713 HFAIAKEQVRNNIAG 727 >UniRef50_A1VCL0 CheA signal transduction histidine kinases n=5 Tax=Bacteria RepID=A1VCL0_DESVV Length = 1089 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 201/661 (30%), Positives = 325/661 (49%), Gaps = 20/661 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F + + ++ L L +A E ++A++R +++ G ++ Sbjct: 431 DAEDLDVFKATVAQQMDNIRVGLDELARDASQKEYVDALYRFLVTVQNSCAYMGAEDVRL 490 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 L+D+AR ++ +++L + I+ + L E D + Sbjct: 491 YAERTAGLVDQARNADLDFGL-MVDLLRQETSIIGDMLGKEIARMEDCLNGGDAESEQGE 549 Query: 125 QLALEAKGETPSAVTRLSV------VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 A G SA T + VA+ P E+ + ++ + Sbjct: 550 APAAATVGTPSSAATTSASAPESGSVAQGAPSSEKPAQKPEPVPAAPASQSAASSGAQAA 609 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 A + G A+ A A V+ Sbjct: 610 ASAPAGQAAAAASAKPAAPATSGTEAKPVAAATTPPKAAAASSAAPAKAVATPPRPAAPA 669 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 AA + S++IRV EK+D L+NL+GEL+I ++ + + L+ Sbjct: 670 PAAASAPAAAPAGGPPAGGNKASSTIRVDHEKLDHLMNLIGELIINRNRYSMLARHLEEG 729 Query: 299 NHG--------DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 +L + + R + DLQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+ Sbjct: 730 GASVNVAEVAQNLSETTYAMARISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKE 789 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V+L L G TELDKS++E I DPL HL+RNS+DHG+E E+R+A GK G + L A H+ Sbjct: 790 VDLVLEGEETELDKSVVEVIGDPLVHLIRNSVDHGVEPEEERIAKGKKPKGVVTLRAFHK 849 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTD 467 G ++ IE+ DDG G++ E++ A +G+ E M D E LIFAPGFS+AE++TD Sbjct: 850 GNSVAIEIEDDGKGIDPEKMREVAVRKGIVTPEEAKAMDDREAMELIFAPGFSSAEKITD 909 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVV+ NI+ + G V I S+ G GT + LPLTLAI+D + V VA +++ +P Sbjct: 910 ISGRGVGMDVVRTNIKNLKGSVSIHSEVGKGTRFTLSLPLTLAIIDALMVNVAGQMYAIP 969 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 L+AV E+ + L + G + V +RGE L IV+L ++ + + + VV++ Sbjct: 970 LDAVSETTKIEARRLTDVKGRKAV-TLRGEVLGIVDLSELLALPRSDAQ-DVLSVVVIHD 1027 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 RR L+VD+L+ + ++V+K L + + GIS ATI+GDGSV LI+D + + + Sbjct: 1028 NDRRLGLVVDRLLERQEIVIKPLGAYLGDLKGISGATIMGDGSVILILDPHEIYMMATSK 1087 Query: 648 R 648 Sbjct: 1088 A 1088 Score = 136 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 57/328 (17%), Positives = 113/328 (34%), Gaps = 11/328 (3%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ + + + F EA E L +E +LL L+ + LN IFR HS+KG +G G Sbjct: 1 MTQEYMDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + + H EN+LDE R+G M + ++I+++ L D +++ +D + S + + + Sbjct: 61 LNRMNQLAHRAENILDELRKGAMVVTSEIMDVILAVTDALRQMIDNLESSGQEGDVAIES 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + + + + S VA EP + + ++ + A VD + Sbjct: 121 LITTIDAIMAGGGAVPAAPAAPASPVAPVEPVAAVTPAADEGAVMPDGIVATTVDEPSDG 180 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + V S + + E + I + S Sbjct: 181 MSASDAAGGVGDNVQGPSVQDAAAPVASGDSGNESGMTEGESIAAWIAALPDTESYALTA 240 Query: 239 KLAAEQAPT--GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 A E + + R EK D++ +L Sbjct: 241 FGEAHLKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFR-------FFHNLKGNSG 293 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSI 324 + +L + + +++ M Sbjct: 294 IIGFRELNGLTHEAETLLNNIRRGEMQS 321 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 108/306 (35%), Gaps = 19/306 (6%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F DEA E+ + LL L+ + + ++N +FR H++KG +G GF L TH Sbjct: 246 LKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFRFFHNLKGNSGIIGFRELNGLTH 305 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQALRQL 126 E LL+ RRGEMQ + ++++L L D++ ++ + S + + L+Q Sbjct: 306 EAETLLNNIRRGEMQSSAELVDLLLFVVDVIDALVNRIETASGMVHGFDISEVLEPLQQA 365 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + P + ++ A S+P E + + + G + Sbjct: 366 VAGGEARLPVGIVGMAKQAASQPAAESTATTEG----------------SMQGGADSADE 409 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLC-FVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 D + L F Q +++ K + Sbjct: 410 SAAPAKGEQQKAAACDPSATYDAEDLDVFKATVAQQMDNIRVGLDELARDASQKEYVDAL 469 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 V + + + +R+ E+ L++ + ++ + + L Sbjct: 470 YRFLVTVQNSCAYMGAEDVRLYAERTAGLVDQARNADLDFGLMVDLLRQETSIIGDMLGK 529 Query: 306 SMGQLQ 311 + +++ Sbjct: 530 EIARME 535 >UniRef50_C2BUM1 Sensor histidine kinase CheA n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BUM1_9ACTO Length = 840 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 201/670 (30%), Positives = 346/670 (51%), Gaps = 21/670 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++ + + F E+ E L +EQ ++ L+ E E L++IFR H+IKG +G F+ Sbjct: 1 MGEMDEIVREFLVESYENLDQLEQDMVSLESEPGSKELLSSIFRTIHTIKGTSGFLAFNR 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L++ H ENLL E R G +++ + ++ L D ++ + + +++ + + + Sbjct: 61 LEKLAHRGENLLSELRDGVREMDQETADVLLLMVDRIRNIMGSVEETGQEGDVDIESVIA 120 Query: 122 ALRQLA-LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + + + P+A A +E + + + + L E+L Sbjct: 121 QIEAIQGKTSSAPLPAADGMAGEPAPAEAAAPAADAPVEVPFLTNVADENGNVNLGEDLA 180 Query: 181 HLTTLTDVVKG---------ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 AD + GD A + + P Sbjct: 181 SAPAAPAADAPAEVPFLTNVADENGNVNLGDGAAEAAAPAPAETAAPAAQAAPAAKPEPP 240 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 P L A + + ++RS +SIRV V+ +D L+ V ELV+ ++ + + Sbjct: 241 APAAPKSSLRAAKKDDAKPAEHGSSRSAADSSIRVDVDLLDVLMREVSELVLVRNQIVRL 300 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + D + +L+ S +L A +LQE +M RM P+E+++S+ PR+VRDLA + K V Sbjct: 301 T---DSMTDMNLVQSSQRLSIVATELQEGIMKTRMQPIEHLWSKMPRVVRDLAKQTEKNV 357 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 +L ++G TELD+SL+E I DPLTH+VRN++DHG+E PE R AAGK+ G + L A H G Sbjct: 358 QLVMIGGDTELDRSLLEAIKDPLTHMVRNAVDHGVESPEARKAAGKDPKGTVTLKAYHAG 417 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDV 468 G + +++ DDGAG++ + KA +GL + MSD E+ L+F PGFSTA++V+++ Sbjct: 418 GQVVVDIIDDGAGIDPVVVANKALDKGLVTQQQLGEMSDKEIFNLLFLPGFSTAKKVSNI 477 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVG DVVK +++ +GG V+++S+ G G+T R+ +PLTLAI ++V E++ +P Sbjct: 478 SGRGVGTDVVKTSVEAIGGTVDVESELGKGSTWRMRIPLTLAIQPSLTVESHGELYAIPQ 537 Query: 529 NAVMESLQPREADLHP---LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ--GIVV 583 +++E + + V +RG LP++ L V + A ++ G++ Sbjct: 538 VSLLELVVLDSSRKETSMEYVNASPVYRLRGMLLPLIRLSHVLHPEEASDRGSEANGVIA 597 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +LQ+ +R+ L+VD++I ++VVK L S + + + AT+LGDG VALI+D+ A+ Sbjct: 598 VLQNDDQRFGLVVDKVINNEEIVVKPLSSKLKSIGLYAGATLLGDGRVALILDIGAVARK 657 Query: 644 NREQRMANTA 653 + A Sbjct: 658 SLTGATTQAA 667 Score = 68.4 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 513 DGMSVRVA-DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 + V + +PL AV + + GG V++ RG+ LPIV L ++ V Sbjct: 687 QALVVGIGDGRRVAIPLAAVTRLEHISVEAVERV-GGREVIQYRGQILPIVRLDRLLGV- 744 Query: 572 GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV--KNLESNYRKVPGISAATILGDG 629 E VV+ + G R A++V +++ +V K SN G+ + +L D Sbjct: 745 MDYEEPKDLQVVVYRRGERSVAMVVREIL---DIVADDKRKHSNIED-HGLLGSAVLKD- 799 Query: 630 SVALIVDVSALQAIN 644 V ++DV Sbjct: 800 RVTELLDVEQAVRAA 814 >UniRef50_Q39QJ5 CheA signal transduction histidine kinase n=6 Tax=Desulfuromonadales RepID=Q39QJ5_GEOMG Length = 607 Score = 556 bits (1432), Expect = e-156, Method: Composition-based stats. Identities = 217/663 (32%), Positives = 340/663 (51%), Gaps = 65/663 (9%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+++ + F E ELL ++ L+ L+ DAE +N IFR+ H++KG + G Sbjct: 1 MAIECEDQELLDGFLTETAELLEKLDDDLVALEKTPSDAELMNGIFRSIHTVKGASSFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F +L + TH E++L+ RR Sbjct: 61 FELLVKVTHKTEDVLNRMRR---------------------------------------- 80 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 GE + V+ ++ + S I+ R G V L Sbjct: 81 -------------GELEVTPEVMDVILEAVDLVKLLVSDIKGGDIVEREIDGTVGKLLPF 127 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L V+K S + + P AE T + + P Sbjct: 128 LSENAKEATVLK--PSATTVTPSAPAEAAPTPQATETETHPSAELSPAPEAAPVKAPEPA 185 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 P + +K ++T++RV V+++D L+N VGELV+ ++ + Q +++ + Sbjct: 186 PRVQAPPPPAPRDDKKGDDLADNTTVRVDVKRLDDLMNQVGELVLERNRMMQLNTDFNDG 245 Query: 299 NHGDLITSMGQLQR----NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELT 354 G+L + +LQ V+ +RM+P+E VF ++PR+VR+LA LGK+V+L Sbjct: 246 GDDTFGEEFGKLSKRISFVTSELQMQVLKMRMIPVEKVFKKFPRIVRNLARDLGKEVDLL 305 Query: 355 LVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNI 414 + G TELD+S+++ I DPL HL+RN++DHG+E P++R+AAGK G LILSA H+G I Sbjct: 306 VFGEETELDRSVVDEIGDPLIHLIRNAMDHGLETPDERMAAGKPRKGTLILSAAHEGNQI 365 Query: 415 CIEVTDDGAGLNRERILAKAASQGLTVSENMS---DDEVAMLIFAPGFSTAEQVTDVSGR 471 I + DDG G++ ERI KA +GL E ++ E+ LIF PGFST E+ TD+SGR Sbjct: 366 VISIKDDGKGIDPERIARKAKEKGLVTDEQLAAMGQREILDLIFLPGFSTKEKATDLSGR 425 Query: 472 GVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAV 531 GVGMDVV+ NI+K+ G ++I+S+ G G+ + LPLTLAI+ + V V DE + +PL AV Sbjct: 426 GVGMDVVRTNIKKLNGIIDIRSELGQGSEFILKLPLTLAIIQSLLVEVEDETYSIPLAAV 485 Query: 532 MESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 +E+L+ E + H + GG+ VL++R LP++ L K+FNVA ++ VV++ +R Sbjct: 486 LETLRVEEREFHTI-GGQEVLKLRDSVLPLMRLQKIFNVAPSERSRVACYVVVVGVAEKR 544 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 L+V +L+GQ +V +K+L +PGI+ +TILGDG V LI+D + L + Sbjct: 545 VGLVVSRLLGQQEVAIKSLGKYLANLPGIAGSTILGDGRVTLIIDPAGLMENSDGSGGGR 604 Query: 652 TAA 654 AA Sbjct: 605 IAA 607 >UniRef50_B5JPQ3 CheW-like domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPQ3_9BACT Length = 785 Score = 555 bits (1431), Expect = e-156, Method: Composition-based stats. Identities = 214/657 (32%), Positives = 341/657 (51%), Gaps = 48/657 (7%) Query: 1 MSMDI-----SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAG 55 MS DI ++ + F E+ E L +Q LL ++ D + LN +FR H+IKG AG Sbjct: 1 MSGDINDDLQAELIKDFLLESSEGLETFDQDLLEIEKGDSDPQLLNQVFRVVHTIKGTAG 60 Query: 56 TFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 GF+ ++ H EN+L R GE++ DI + L+ D ++ LD + + Sbjct: 61 CLGFNRIESIAHTGENVLSMMRDGELESTPDIADALLKLSDALRAILDVIES---CGSDE 117 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 LR L K P + +A V+ Sbjct: 118 SAGEYNDLRSLLDSVKKGEPLGSADVDELALDP----------------------MVNHH 155 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 +E G D ++L+A + + ++ A A+ Sbjct: 156 QEVDGSWGLFEDDEPTVEALAAEISEPVVAEEAAAGWGLFDVAEA----------SGEAS 205 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 + + E + ++RV V+ +D L+N+VGELV++++ L Q S + Sbjct: 206 VAKENLDTKPKEKTPEISRKLEKVSGATVRVDVDLLDTLMNMVGELVLSRNQLLQVSQQ- 264 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 + ++ + + + +LQ+ VM RM + V+ +YPR+VRDLA LGKQV L Sbjct: 265 RVITPAEISSLSQRFNQVTTELQQGVMKTRMQAIGSVWGKYPRIVRDLASDLGKQVSLET 324 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G+ TELD+++IE I DPLTH++RN++DHGIE PE+R AA K +V L++ A H+GG + Sbjct: 325 FGADTELDRTIIEAIKDPLTHIIRNAVDHGIESPEERAAADKPAVAQLLMRAFHEGGQVN 384 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 IE+ DDGAG+N ER+ KA +GL E +++ E+ LIF PGFSTAE++++VSGRG Sbjct: 385 IEIVDDGAGINGERVCRKAIDKGLISDEEATRLTEREMINLIFLPGFSTAEKLSNVSGRG 444 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVVK NI+K+GG V+IQS G GT++RI +PLTLAI+ + V+ A + F +P +++ Sbjct: 445 VGMDVVKTNIEKIGGSVDIQSSIGRGTSLRIKIPLTLAIVPALVVKSAAQRFAIPQVSLV 504 Query: 533 ESLQPREAD-LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTE-ATQGIVVILQSG 588 E ++ + + V +RGE LP+V L + ++ K E T +V+L++ Sbjct: 505 ELVRLEGDQAVEAVEQVYDSPVFRLRGELLPLVFLDRALKISKPKAEAPTTISIVVLRAD 564 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 + + L+VD++ ++VVK L + +P + ATI+GDGSVA+I+D + Sbjct: 565 RQIFGLVVDEVSDTEEIVVKPLGHQLKGLPLYAGATIMGDGSVAIILDAVGVAKHAG 621 Score = 54.5 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 6/132 (4%) Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 +PL A + + + GE VL RG + +V L E V Sbjct: 659 RLAVPLEAAERLEEFDLSAIERSGSGESVL-YRGGIMRLVRLADHIGSGAVDIEPQVVQV 717 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV-PGISAATILGDGSVALIVDVSALQ 641 ++ + GGR L+V G ++ ++ PG+ + ++ G + I+DV ++ Sbjct: 718 IVYECGGRYVGLVV---GGIRDIIEESASIQGSGTRPGLLGSAVMQ-GEITDIIDVPSVL 773 Query: 642 AINREQRMANTA 653 + A Sbjct: 774 KSAGLNPPQSVA 785 >UniRef50_Q46DT7 Chemotaxis sensor histidine kinase n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q46DT7_METBF Length = 598 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 176/643 (27%), Positives = 323/643 (50%), Gaps = 49/643 (7%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+S + F E+++ + ++ LLVL+ + + EQ+N +FRAAH+ KG A T GF + Sbjct: 1 MDMSKYMDIFRVESEKYIKELSDSLLVLENDPENTEQVNTLFRAAHTFKGMAATMGFKQI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+L+D R + LN+ +I++ L D ++ ++ S Sbjct: 61 VELTHEMESLIDGLRTRQTVLNSSLIDVLLICVDTLEGLVENVCGS-------------- 106 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 E + + EV ++ Sbjct: 107 -------------------------EGNKPEKEKKDSVNKYEYHPDVYEVLKTLRKVNDS 141 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + K D + + + + + E + K Sbjct: 142 PEKASIQKAGDKSLSAEKKSEEGGEESGKIKDNAKKCNRDNEVSKTEETNKVKNAAKEIY 201 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + + + + R++ +++D+L+NLVGELVI +S + + + +L + Sbjct: 202 L-PEKAPAYPKSSPKVKIVQNPRISTKQLDKLMNLVGELVINRSRINELTRDL---KSKE 257 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L ++ + R+LQE V+ RM+P++++ YPR++RDLA K+++ + G +L Sbjct: 258 LEAALSDFHKLTRELQEEVIEARMVPLDHITYIYPRMIRDLARVQNKKIDFIIKGKEIKL 317 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++E I D L HL+RN++DHGIE+PEKR+ K G ++++A Q + I + DDG Sbjct: 318 DRTILEEIGDSLVHLLRNAVDHGIEIPEKRVELRKKENGTVLITASRQENFVLIRIEDDG 377 Query: 423 AGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ I A +G+ +E + ++E LIF PG ST++ VTD+SGRG+GMDVVK Sbjct: 378 CGIDTNEIRKVALKKGIISRESAEQLQEEEAMQLIFTPGLSTSDNVTDISGRGIGMDVVK 437 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 ++++GG V+++SK G G++ + LPLT+A+ M +RV E + +P +++++++ Sbjct: 438 NRVERLGGSVKVESKPGLGSSFELKLPLTVAVYQAMLLRVGKEKYAIPFTSIVKNIEVSS 497 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 ++ + G+ V+ + + LP+ L + F + E VV+++ G+ ++VD+L Sbjct: 498 QEIKHIK-GQEVILIDNKILPLFRLKRQFQLPDDDDE-NNIFVVLVEKHGQYTGIIVDEL 555 Query: 600 IGQHQVVVKNL-ESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +G+ +V+VK+ G + ATILGDGS+ LI+DV++L Sbjct: 556 LGKQEVIVKSFKSKLLDDTRGFAGATILGDGSIILIIDVNSLI 598 >UniRef50_Q20XD8 CheA signal transduction histidine kinases n=12 Tax=Alphaproteobacteria RepID=Q20XD8_RHOPB Length = 686 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 226/687 (32%), Positives = 349/687 (50%), Gaps = 48/687 (6%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 + F EA +L +E LL L D E ++ FRA H+IKG FGF + TH Sbjct: 7 VEVFRQEASDLFEALEGALLDLGSRPDDRELIDTTFRALHTIKGSGAMFGFDKVATFTHE 66 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF-DYICQALRQLA 127 E D+ R+GE++ + D+I++ L KD ++ ++A + + + D + + + A Sbjct: 67 FETAFDQVRKGEIKASQDLISVALSAKDYIRALIEAPESTDSIIGDAILDELRRFVAPTA 126 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT---- 183 E S + ++ + + ++L L Sbjct: 127 DRGPDEEHSIASAVTTAPPAPATAGRGWQLHIEFDRDVLRNGSNPLDYLDDLRKLGTAFA 186 Query: 184 -TLTDVVKGADS---------LSAILPGDIAEDDITAVLCFVIEADQITFETVE------ 227 LT+ V D L D I V FV + ++ E + Sbjct: 187 TALTEDVPLLDELEPELCFLKWDVTLNSDCDRAAIDDVFMFVQDEMVLSCEPLPETAVVA 246 Query: 228 VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST----------------SIRVAVEKV 271 P I++P + R E E + +T ++RV +++ Sbjct: 247 PQPMIASPSLAPNPTVATAPRRAEPEADKPATAATKSKGDEQRRFDDKGMPTVRVQAQRL 306 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D+L++ VGELVI Q+ L+Q ++ D ++ + +++R A L+++ M RM+P+ Sbjct: 307 DELMDRVGELVIAQARLSQLAAATDDIS---IKAIAEEIERLAAGLRDTTMGARMVPIGS 363 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 +F R+ RLV DL+ LGK V+ G TELDK++IER+ DPL HL+RN++DHGIE Sbjct: 364 LFGRFRRLVHDLSRDLGKPVDFVTSGEDTELDKTMIERLADPLVHLIRNAIDHGIEDTAS 423 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEV 450 R AAGK +G + ++A H G + + V D+GAGLN RI AKA QGL +SDD+V Sbjct: 424 RAAAGKTEIGRIEIAAIHSGAQVLVTVRDNGAGLNAARIRAKAEEQGLIQPGAVLSDDDV 483 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 L+F PGFSTA+ ++ +SGRGVGMDVVKR I M G ++I ++ G GTT+ + LPLTLA Sbjct: 484 HQLLFQPGFSTAQTISTLSGRGVGMDVVKRTIDAMRGSIDISTQHGRGTTVTLRLPLTLA 543 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNV 570 I++G+ +RV + +I+PL AV E + + G L +RG+ +P + L +F V Sbjct: 544 IIEGLLIRVGEGRYIIPLAAVEECAELSAEE--ERVRGRDFLNMRGDLVPFLRLRDLFEV 601 Query: 571 AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 G + ++I SG R L+ DQ+IG HQ V+K+L + V S ATILGDGS Sbjct: 602 GGQPDRHQK--IIIASSGETRVGLIADQIIGSHQSVIKSLSKLHSDVTMFSGATILGDGS 659 Query: 631 VALIVDVSALQAINR---EQRMANTAA 654 ALI+DV+ L AI + + ++ N AA Sbjct: 660 AALILDVAQLLAIGQSLGDGKLTNEAA 686 >UniRef50_Q1JZU4 CheA signal transduction histidine kinases n=2 Tax=Deltaproteobacteria RepID=Q1JZU4_DESAC Length = 774 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 217/640 (33%), Positives = 334/640 (52%), Gaps = 63/640 (9%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F EADELL EQ LL + E + + IFR+ HS KG +G FG+ L++ Sbjct: 195 PEMVERFVQEADELLETAEQSLLEWEKEPDSQDHVALIFRSIHSFKGNSGFFGYGTLEKL 254 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H +EN+LD + G + + L + D +++ L+A E D I + Sbjct: 255 SHQIENVLDVVKSGGSFATENPFEVLLNSVDALKDGLNAL---TEDGRDDIDEIDSLIDA 311 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 L + VV Sbjct: 312 LKALPSPRIGEVLVDKGVV----------------------------------------D 331 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + V A + GD+ D A V EA +T + + Sbjct: 332 EETVNAALNQQKKPLGDVIVDMGKATKEQVDEALTTQTQTKKPAAPAPRAKPK------- 384 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 + + IRV +EK+D LINL+GELVI ++ML + +L+ + Sbjct: 385 ----------GSAIKRQDIRVDLEKLDNLINLIGELVIAENMLIH-NPDLEGLELESFNK 433 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + Q+ + R+LQE M IRM+P+ +F R RLV DL+ K GK+V+L L G STE+DK+ Sbjct: 434 AAQQMGKLVRELQEMAMIIRMIPVSGLFRRMIRLVHDLSVKSGKKVDLKLSGESTEVDKT 493 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +IE I DPL H++RNS+DHG+E P++R+AA K+ G + L+A H+ G + I + DDG GL Sbjct: 494 VIETITDPLVHILRNSMDHGLEPPDERIAAEKDETGVIRLNACHEEGEVWITLEDDGRGL 553 Query: 426 NRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 N+E+ILAKA + GL + +++D E+ LIF PGFSTA+++TD+SGRGVGMDVVK+N++ Sbjct: 554 NKEKILAKAITNGLIEGDGSDLTDKEIYNLIFQPGFSTADKITDISGRGVGMDVVKQNLE 613 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 K+ G V++ S G GT I++ +PLTLAI+DGM VRV I+P+ ++ E+ +P+ + Sbjct: 614 KIKGKVDVDSIPGKGTKIKLRIPLTLAIIDGMLVRVGTARCIVPILSIKEAFRPQPDAIT 673 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 E ++ VR + P+V L ++ ++ I+++L+ GR L+VD+++GQ Sbjct: 674 VTPDNEELVRVRENFFPVVRLHELLETTPEHSDLVDAILIVLEYQGRSICLMVDEIMGQQ 733 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 Q V+K L V G S TILG+G V+LI+DV L + Sbjct: 734 QTVIKGLSEYIGNVRGCSGCTILGNGDVSLILDVGNLVEM 773 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 9/230 (3%) Query: 1 MSMDIS----DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGT 56 M+ ++S + Q F E+ +++ +E ++ L D E +NA+FR HS+KG AG Sbjct: 1 MTDELSSDQIEIIQEFVQESQDMIEQLEPTIIELGQT-TDNETINAVFRLFHSMKGSAGF 59 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL---DAYKQSQEPDA 113 F+ + H E+LLD R G+M L + + L E D +E L D + + Sbjct: 60 LEFNHITSVAHAAESLLDLVRSGKMSLQPEHVTLLCECCDFTKEALETVDEHFTDEAMAK 119 Query: 114 ASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + + ++ EP+ + P+ S A E+D Sbjct: 120 QGEAMATRFHEAMDSDSAAPADEEPVTQEPQTVPEPEAQAETVPQPQPESASEADAEEID 179 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 + E TL ++ ++ E ++L + E D Sbjct: 180 PSKIEATDDLTL-EITPEMVERFVQEADELLETAEQSLLEWEKEPDSQDH 228 >UniRef50_Q47I37 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=10 Tax=Betaproteobacteria RepID=Q47I37_DECAR Length = 639 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 212/650 (32%), Positives = 320/650 (49%), Gaps = 39/650 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D Q F EA +LL+D++ L+ L+ D LN IFR H++KGGAG + L Sbjct: 7 MEDLLQDFLQEAHDLLSDVDNKLVDLEKMPDDRGLLNDIFRGFHTVKGGAGFLNATELVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 HL ENL D R GE++L +++++ + ++E Q +P AA I Sbjct: 67 LCHLTENLFDRLRNGELELTPELMDVIMAATKGVREMFGELGQMVQPQAADPSVIAALQG 126 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L E P A V PQ+ S + L G L T Sbjct: 127 ALTGEVHAAAPVAEP---VPLAEPPQETVSSAPGEPDWNLLHSAVTGQAPAAAPQGELIT 183 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + A + + +V+ P + A ++ Sbjct: 184 KAE----------------------AASAEIAVMPATAVPSTDVAQPAPASPFGRRATDK 221 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL-----DPVN 299 + +IRV ++DQ++NL GE+ +T++ L +++ D Sbjct: 222 PGGQPANARRVEERARENTIRVDTSRLDQVLNLSGEIGLTKNRLTSLRADILAGKNDSET 281 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L ++ QL DLQ SVM RM P+ +F +YPR+ RDLA +LGK VEL L G Sbjct: 282 LHALDQAVSQLDLLVSDLQNSVMKTRMQPIGRLFQKYPRIARDLARQLGKDVELVLAGEE 341 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TE+DK++IE + DPL HL+RN++DHG+E+P +R AGK + L A +G +I + + Sbjct: 342 TEVDKTMIEDLADPLIHLIRNAVDHGVEMPSERQMAGKPVKSLVRLEARQEGDHIVLIIA 401 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ ERI AKA +GL E + + + LIF PGFST Q++DVSGRGVGMD Sbjct: 402 DDGKGMSAERIRAKAIEKGLVSEEEANTLDERQSLNLIFLPGFSTKAQISDVSGRGVGMD 461 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK NIQK+ G +EI+S+ G G+ I LPLTLAIL + V + ++ F LPL+ V E L Sbjct: 462 VVKTNIQKLNGSIEIRSEPGKGSVFIISLPLTLAILPVLLVLLGEQPFALPLSMVREILP 521 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 ++ + + GG+ L VRGE LP++ L ++ V +Q+ R + L V Sbjct: 522 IEQSRIQEV-GGKETLVVRGEVLPVITLARLLGWPQKNYPE---YGVFMQTAERSFILGV 577 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 D G+ V+K+LE + G++ T L +G + LI+D+ L + + Sbjct: 578 DSFAGRDDAVIKSLEDF--RPKGVAGVTTLSNGQIVLILDMKELLSDIGQ 625 >UniRef50_C5RMH7 CheA signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMH7_CLOCL Length = 671 Score = 553 bits (1425), Expect = e-156, Method: Composition-based stats. Identities = 187/670 (27%), Positives = 347/670 (51%), Gaps = 30/670 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFS 60 S + + F E+ +L+ +E ++ + A E +N IFR H+IKG + ++ Sbjct: 4 SFEKEPMLEMFIFESTQLIDQLENIMIDSEKNAGFSKEHINEIFRIMHTIKGSSAMMMYT 63 Query: 61 VLQETTHLMENLLDEAR-RGEMQLN-TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + + H +E+L R + ++ + ++++ L+ D ++ +L + + +P Sbjct: 64 HISKLAHSIEDLFFYIRENNPLHMDYSTLVDVVLKGIDFIKIELTKIE-TNKPVNGDVAI 122 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL-------------- 164 + +RQ + K + ++ E ++Q + Sbjct: 123 LEGEIRQYLVNLKNSNNVETVKKNIELIEEVIEQQPLKNRSKVDENFSKNRFEAVIFFDE 182 Query: 165 -SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT- 222 ++ + L ++ + S I ++ + +++ Sbjct: 183 GCSMENIRAFSVIHSLKNIAEDIEYTPKELVESKENCEIIKKEGFKVSFATLKSFNEVED 242 Query: 223 -------FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLI 275 V++ G ++ T ++ + + I V V K+D+L+ Sbjct: 243 LLLKTAVIRKVQLRILEDINQGESEKVNNIHMGLDDKTHTMKNIKQSIINVNVNKIDKLL 302 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 +L+GELVI ++M+ Q + ++ + + L++ + +LQ+ VMSIRM+P+ F + Sbjct: 303 DLMGELVIAEAMVVQ-NPDVQGLQSDSFQKAARLLEKISGELQDVVMSIRMIPVSGTFQK 361 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 R+VRD++ KL K+VEL L+G TE+DK++IE + DPL HL+RNS+DHG+E PE+R+ + Sbjct: 362 MHRVVRDMSKKLNKEVELELIGEETEVDKNIIENLGDPLMHLLRNSIDHGLEGPEERVDS 421 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAML 453 K +VG ++L A++ GG++ I + DDG G++++++L+KA QGL + ++D ++ Sbjct: 422 NKPTVGKIVLEAKNLGGDVWISIKDDGRGIDKDKVLSKAKEQGLINKPEDQLTDKDIYSF 481 Query: 454 IFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILD 513 IF PGFST + V++ SGRGVGMDVV+ NI+K+GG + I S +G GT I I +PLTLAI+D Sbjct: 482 IFMPGFSTKDNVSEFSGRGVGMDVVRENIEKIGGKIFIDSSKGRGTHIAIKIPLTLAIVD 541 Query: 514 GMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 GM++ V + + +P+N + ES + + +L + + VRGE I+ L ++ + Sbjct: 542 GMNIAVGNNRYTIPINLIKESFRLIKENLIIDPHDQEMTIVRGESYKIIRLHQLLKIKPK 601 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVAL 633 T +GI+++++ G+ L D+L+GQ VVVK L + IS T+LGDG ++L Sbjct: 602 NTNIQEGIIIMVEDEGKGVCLFADELLGQQPVVVKALPNYINHRRFISGCTLLGDGGISL 661 Query: 634 IVDVSALQAI 643 I+D+ A+ Sbjct: 662 ILDIPAIINY 671 >UniRef50_C1DCD0 Probable chemotaxis protein CheA n=2 Tax=Laribacter hongkongensis HLHK9 RepID=C1DCD0_LARHH Length = 616 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 209/658 (31%), Positives = 317/658 (48%), Gaps = 66/658 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + Q F E+ ELL+D++ L+ L+ D LN IFR H+IKGGAG + L Sbjct: 7 MEELLQDFLTESSELLSDVDNKLVELEKYPEDKGLLNDIFRGFHTIKGGAGFLNATPLVT 66 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H ENL D+ R GE++LN+ ++++ L+ ++++ QS+ P A +I L Sbjct: 67 LCHRTENLFDKLRNGELKLNSHVMDVILDATGVVRDMFGDLAQSRMPAPAP-QHILDNLD 125 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + Sbjct: 126 AVLSGQT---------------------------------------------APVAAAPA 140 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 G + + D A L P + A+ Sbjct: 141 AAASQPGEPDWQQLYQAVVVPADAAAQLTSKSAPSTAVAAAPAPVPAATPAASSPPPAQS 200 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSE-----LDPVN 299 + +IR+ +++DQ++NL GE+ +T++ L +E L Sbjct: 201 RDRSPASSPQEA------TIRIDTQRLDQVLNLSGEIGLTKNRLTTIRTEIMQGNLGANT 254 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L ++ QL DLQ +VM RM P+ +F +YPRL RDLA +LGK+VEL L G Sbjct: 255 LRSLDEAVSQLDLLVGDLQNAVMKTRMQPIGRLFQKYPRLARDLARQLGKEVELVLSGEE 314 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDK++IE + DPL HLVRN++DHGIE PE+RLAAGK++ + LSA+ G +I IEV Sbjct: 315 TELDKTMIEDLNDPLVHLVRNAVDHGIETPEERLAAGKSAQSIVELSAQQVGDHIVIEVA 374 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G+N + KA +GL E + D + LIF PGFST +Q++ VSGRGVGMD Sbjct: 375 DDGRGMNAGMLRKKALEKGLIDLEQANSLDDKQALHLIFLPGFSTKDQISSVSGRGVGMD 434 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV+ NIQK+ G ++I S GT I I LPLTLAIL + V+V ++ F +PL V E + Sbjct: 435 VVRTNIQKLNGRIDISSAPNEGTKISISLPLTLAILPVLVVKVCNQPFAVPLAMVREIIP 494 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 + ++G + VR E LP+ L ++ + V++QS + + L + Sbjct: 495 FSSDSIQEVSGR-PTIVVRDEILPVRRLTELLGWKATQ---EPCFGVLMQSAEKTFILAI 550 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 D IG+ VV+K L++ + G++ AT+ GDG+V L++D+ L + +R A Sbjct: 551 DSFIGRDDVVIKPLQNI--RPKGVAGATLSGDGAVVLVLDMEDLLSNDRGDHKLARAG 606 >UniRef50_B0SDW8 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SDW8_LEPBA Length = 643 Score = 552 bits (1422), Expect = e-155, Method: Composition-based stats. Identities = 190/653 (29%), Positives = 324/653 (49%), Gaps = 27/653 (4%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPD-----AEQLNAIFRAAHSIKGGAGTF 57 M+ D + + EA E L ++E LL + D + L+ +FR H++KG +G F Sbjct: 1 MEREDVLE-YLTEAKECLENIETGLLNFEKTTLDGSLVERDLLDTLFRHFHTVKGSSGFF 59 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD 117 G S + + H ENLLD R + + + + L D++ E + + S + Sbjct: 60 GLSGIVKVAHAAENLLDYLRNKPEVQDEETLEILLSALDLLNELVIHEENSPTGGDLYSE 119 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + L + + K+ D S + L E Sbjct: 120 DQIRFLEKTNQKLSE------------LKNISTDSNLDSNTQVSSKEFGLFLEETPKESG 167 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 ++ + E F E + E + + + Sbjct: 168 SEEFGIFTSNSTSKNQEEFGLFQTTPKESVPQEFGLFHQEPITSSLE--FGLFEPTKENL 225 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 + ++ P +++ +S + IR+ +K+D L+++VGE+VI + M+ + +L Sbjct: 226 VPSKSDSQPNAPSTKKEEKKSVQKKDIRIDTDKLDSLLDIVGEIVINEPMVTEH-PDLQK 284 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + + S QL++ R+LQE +S+RM+P+ VFSR RLVRD A K GK V+L + G Sbjct: 285 LKLENFQKSALQLKKLIRNLQEITLSLRMVPIAGVFSRMERLVRDTAKKTGKLVDLVISG 344 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TE+DKS+IE + DPL H++RN++DHG+E PE+R GK+ G + L+A G + IE Sbjct: 345 EDTEIDKSIIEEMYDPLVHIIRNAIDHGLETPEERKEVGKSPKGKIHLTAVQSGKEVWIE 404 Query: 418 VTDDGAGLNRERILAKAASQGLT---VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 V DDG GL R++IL KA + GL +N+ D+EV +F PGFSTA++VTD+SGRGVG Sbjct: 405 VRDDGRGLQRDKILRKAITLGLIHQSEVDNLKDEEVWDFLFHPGFSTAKEVTDLSGRGVG 464 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 +DVV++N+ + G V++ S GT I +PLTLAI++G+ VR ++ FILP V E+ Sbjct: 465 LDVVRKNVTTLKGFVDVSSNPTQGTIFLIRVPLTLAIIEGLVVRKSETYFILPSIDVKET 524 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE---ATQGIVVILQSGGRR 591 + + ++ L ++ R + IV++ +F E + +++ +S + Sbjct: 525 IYIKNEPINELYRNNHSIQYRENQISIVDIDLLFGKESELNENNSIEEKYMIVTESHENQ 584 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 ++ D+++G +V+K + ++ + G++ TILG+G LI+DV L + Sbjct: 585 MGIVFDEILGNQSIVIKPISPLFKNINGLAGCTILGNGHAGLILDVRKLINQH 637 >UniRef50_C5BIY1 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BIY1_TERTT Length = 701 Score = 551 bits (1420), Expect = e-155, Method: Composition-based stats. Identities = 224/696 (32%), Positives = 359/696 (51%), Gaps = 62/696 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 TF +EA E L E+ LL L+ +A ++ FR+ H+IKG G G+ L H Sbjct: 4 VIATFQNEAREHLQLFEESLLELEDNPHNAGCIDQAFRSIHTIKGAGGIVGYRELCNFAH 63 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +EN++D+ R GE +++++I+ FL+ KD +Q L + + + + L Sbjct: 64 HVENVMDKIRSGEYDISSELISFFLDAKDHIQAMLPNPEPESHLIIEGQQLLEKLYKVLP 123 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT---- 183 EA + S + V + E + S +V L ELG L Sbjct: 124 DEADQNSVSTPFESATVEQEEKPATKVFRIRFTPDADSFKNGFDVRPLLRELGGLGHCQV 183 Query: 184 ----------TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK-- 231 A L + + + V FVI+ + E ++++ K Sbjct: 184 TTITHDLPDFNALQPQHSAMRWDLTLLTEQPQSSVDDVFIFVIDDWTLEIEEIDLTDKDA 243 Query: 232 ---------------------------------------ISTPPVLKLAAEQAPTGRVER 252 + + AEQ T ++ Sbjct: 244 ISDKLGELLIARGIISQNQLSDALAENREVGKILQDQGLVKDDDIKAALAEQQVTRETKK 303 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + S+ T++RV +++D+L+NLVGELVI Q+ L Q +++ + ++ L R Sbjct: 304 QTGNDSSAETTVRVPADRLDKLMNLVGELVIVQARLNQVATKRED---EGVLAISEDLDR 360 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 +L+++ S+RM+P+ F RY RLVRD++ L K++ L G+ TELDK +I+++ D Sbjct: 361 LTTELRDNTFSLRMLPIGSTFGRYRRLVRDVSRDLNKKIVLHTEGAETELDKMMIDKLAD 420 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL HL+RNS+DHGIE P R AAGKN+ G ++L A+H + IEV DDG GL+ I A Sbjct: 421 PLVHLIRNSIDHGIEPPADREAAGKNTTGTILLRAQHSDSQVKIEVHDDGRGLDTGIIFA 480 Query: 433 KAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 KA +GL ++ + ++ + LIF PGFSTA+ V+++SGRGVGMDVVKR+IQ +GG + + Sbjct: 481 KAVEKGLVAADAHLDNESIFKLIFEPGFSTAKTVSEISGRGVGMDVVKRSIQDLGGKLAV 540 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERV 551 QS+ G GT RI LPLT AI++G+ V+V++E ++LPL+ V E ++ + + R+ Sbjct: 541 QSELGEGTHFRISLPLTTAIIEGLMVQVSNERYVLPLSVVEECVEIKSSATKT-NDRRRL 599 Query: 552 LEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLE 611 +VR + +P + L + F ++G + Q +VI++ G R+ VD++IGQ+Q V+K L Sbjct: 600 AKVRDQRIPYMRLREWFRLSGIIPDIEQ--IVIVRLGEERFGFCVDEVIGQYQTVIKRLG 657 Query: 612 SNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 Y G S ATILGDGSVA+I+D +L+ + + Sbjct: 658 KMYENTVGYSGATILGDGSVAIILDPLSLRDAIQHE 693 >UniRef50_Q21G15 ATP-binding region, ATPase-like protein n=13 Tax=cellular organisms RepID=Q21G15_SACD2 Length = 806 Score = 550 bits (1417), Expect = e-155, Method: Composition-based stats. Identities = 221/520 (42%), Positives = 320/520 (61%), Gaps = 23/520 (4%) Query: 151 DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDI 208 D P RI+ + + L D + L + +I Sbjct: 263 DVMRTGNDPLRILAELKNLSSTYHSKADTKGLPDFADFEPESCYLGWDIKLEANTEVTEI 322 Query: 209 TAVLCFVIEADQITFETVEVSPKISTPPVLKL------------------AAEQAPTGRV 250 +V + Q+T + +P+ + ++ Sbjct: 323 ETAFEWVADESQLTISALVAAPREDGQTEAEAVNSNEAKLTPILAPVSVVEQKEPVKASK 382 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 + S ++T IRV ++K+D LIN+VGELVITQSML Q S ++D L+ + QL Sbjct: 383 AKPANKASTDATFIRVGIDKIDNLINMVGELVITQSMLGQLSEDVDVAKVPRLVEGLNQL 442 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 ++N R+LQE VM IRM+P+ + F+R+PRLVRDL+ +L KQVEL + G +TELDK+++E+I Sbjct: 443 EQNTRELQEGVMRIRMLPISFSFNRFPRLVRDLSQRLEKQVELVIHGENTELDKTVMEKI 502 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPL HLVRN++DHGIELP RLAAGK VG + L A H+GGNI IE+ DDGAGLNR+++ Sbjct: 503 GDPLVHLVRNAVDHGIELPAARLAAGKPEVGTITLDAYHKGGNIVIEIKDDGAGLNRDKV 562 Query: 431 LAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 L KA + + + + M+D++V LIF PGFSTA VTDVSGRGVGMDVVKRNIQ + G Sbjct: 563 LQKAIDKKIISASDAAMMTDEQVYDLIFQPGFSTAAAVTDVSGRGVGMDVVKRNIQALNG 622 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 V+I SK G G+TI I LPLTLAILDG +RV ++I PL +++ES+Q R ++ LAG Sbjct: 623 AVDIASKLGEGSTITIRLPLTLAILDGQLIRVGGNIYIFPLISIVESMQCRSEYVNQLAG 682 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 G++V +R EY+PI+EL K F++ ++V+++ G++ ++VD+L+GQ QVV+ Sbjct: 683 GQQVFRLRDEYVPIIELSKTFSIPSDTDSIEGALMVVVEFDGQKVGVIVDELLGQQQVVI 742 Query: 608 KNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 K+LE NY++V G+S ATILGDG+VALI+DV ++ + ++ Sbjct: 743 KSLEQNYKQVEGVSGATILGDGTVALILDVQSIVDLFSQK 782 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 72/235 (30%), Positives = 109/235 (46%), Gaps = 13/235 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F+Q FF+E+ E L ME L+ L P D E +NAIFR AHSIKGG+ TF F+ Sbjct: 1 MSIDLSQFHQVFFEESVEGLDIMESALMELDPTDVDDETINAIFRCAHSIKGGSATFSFN 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLD+ R G+ L +NL LE+ D ++E L A QS E + Sbjct: 61 AICDFTHVLETLLDQVRSGQRSLVLTHVNLLLESVDCLREML-ALAQSGELEKTEQAATL 119 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDE-----------QSRSQSPRRIILSRLKA 169 Q + L +G P+ T + S+ P RI+ Sbjct: 120 QRQFEAILANEGPAPAQKTEAAPTVNSDADAPWLITFQPSLEIMQTGNDPARILRELRNT 179 Query: 170 GEVDLLEE-ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 G + L+ + D + S A +P I ++ + V +V + I+ Sbjct: 180 GALQLVANSDALPEWGGFDPEQCYLSWRASVPASIEKNALEEVFEWVTDLADISI 234 >UniRef50_Q97MS3 Chemotaxis protein cheA n=1 Tax=Clostridium acetobutylicum RepID=Q97MS3_CLOAB Length = 649 Score = 549 bits (1416), Expect = e-154, Method: Composition-based stats. Identities = 198/656 (30%), Positives = 351/656 (53%), Gaps = 17/656 (2%) Query: 1 MSMDI--SDFYQTFFDEADELLADMEQHLLVLQPEA-PDAEQLNAIFRAAHSIKGGAGTF 57 MS + +T+ E ++ D+E +L + E E +N IFR H++KG + Sbjct: 1 MSQESLNDSMLETYMIETSGMVDDLENIILQNEEEKCYTDEVINKIFRIVHTVKGSSAMM 60 Query: 58 GFSVLQETTHLMENLLDEARRGEMQL--NTDIINLFLETKDIMQEQLDAYKQSQEPDAAS 115 F+ + E +H +E++ R + Q ++I +L L+ D ++++LD K +E + Sbjct: 61 SFNGIAELSHSLEDIFYFIREEKSQSVRCSNISDLILDNVDFIKKELDKIKNKEEANGDP 120 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 + I + K E + + ++ + + + ++ Sbjct: 121 SELIANNKKFFDSLKKQE------FYKGIVFFQKDCGMENIRAYTAVETLKTISNDICYF 174 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 E + + +K + L D + ++I V ++ + + + +S Sbjct: 175 PENILEDDDTCNTIKES-GFKVFLKSDKSREEINKVFEAIVLLENFKISEITENEYVSIT 233 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 K + E+++ S+ + I V V KVD+L++L+GELVIT++M+ Q + +L Sbjct: 234 EKDKNRDINKIPVKEEKKENITSSAPSVINVNVNKVDKLMDLLGELVITEAMVIQ-NPDL 292 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 + + + QL + ++LQ++VM IRM+P+ VF++ R+VRD++ KL K VEL L Sbjct: 293 RGLEITNFSKAATQLHKVIKELQDTVMDIRMVPLANVFAKMKRIVRDMSKKLDKDVELKL 352 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 +G TE+DK++IE I DPL HLVRNS+DHGIE E+R GK G ++L A++ G ++ Sbjct: 353 IGEETEVDKNIIEHIADPLMHLVRNSIDHGIEDREQRKRCGKTEKGLVVLEAKNLGSDVV 412 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSENM-SDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I + DDG GL++ +IL KA +GL + SD++ LI PGFST +VT+ SGRGVG Sbjct: 413 IRIKDDGGGLDKNKILQKAKEKGLIGENEIVSDEKTCSLILEPGFSTNNEVTEFSGRGVG 472 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV RNI MGG + + S +G GTTI + +PLTLAI+DG++V+V + +P + E Sbjct: 473 MDVVSRNIGDMGGRINVSSSEGKGTTIILKIPLTLAIIDGINVKVGKSYYTIPTLDIKEF 532 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 +P + + G ++ +RG P++ + + +N+ + + GI+++++ + + Sbjct: 533 FKPDSSKILSNMDGSEMITIRGRCYPVIRIHETYNLKTSVKNISDGILIMVEKNNKMTCI 592 Query: 595 LVDQLIGQHQVVVKNLESNYR---KVPGISAATILGDGSVALIVDVSALQAINREQ 647 D+++GQ QVV+K+L + V G+S T+LGDG+++LI+DV + ++ Sbjct: 593 FADEIVGQQQVVIKSLPEYIKNNNNVKGLSGCTLLGDGNISLILDVGEFINASLKK 648 >UniRef50_C2KYL0 Possible histidine kinase n=2 Tax=Clostridiales RepID=C2KYL0_9FIRM Length = 693 Score = 547 bits (1410), Expect = e-154, Method: Composition-based stats. Identities = 207/690 (30%), Positives = 349/690 (50%), Gaps = 47/690 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGF 59 M + T+ E + LL +++ L+ + + +N IFR H+IKG + F Sbjct: 1 MDSTMEGMLDTYLLETEALLDKLDEMLIADEKVGDFSTDDVNEIFRIMHTIKGSSAMMEF 60 Query: 60 SVLQETTHLMENLLDEARRGEM-QLN----TDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 + L H +E++ R + L+ +++ +L ++D ++ L+ K +E D Sbjct: 61 TPLSNIAHHIEDMFFFIRDKGIDSLSGDQKSELFDLMFRSEDFLRSGLEKVKAGEELDN- 119 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + ++ + G+ P+ + A S ++R+ + + Sbjct: 120 NVEEFAGSINAFLAKISGKAPADSAPVVEAADSTKASGENRNLPKDDKAKKFIHVFLDEG 179 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV--------LCFVIEADQI----- 221 + E + + +K D P D+ + TA L F + D Sbjct: 180 IGMENLRAFMIVNAIKEFDLEFRYYPADMDSNPETAQTIIDEGFFLAFDSDEDCEKGEKI 239 Query: 222 --------TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN----------ESTS 263 ++E VE + + V AE + + +E + + Sbjct: 240 LREQSHILSYEPVEATKAEAKAEVKSANAESSSAPKASKEPAAAQQTAQQKAAAPVKQSL 299 Query: 264 IRVAVEKVDQLINLVGELVITQSMLAQ--RSSELDPVNHGDLITSMGQLQRNARDLQESV 321 I V ++K+D L +LVGE+VIT+SM+ L + + + S QL++ DLQ+ Sbjct: 300 ISVNLQKLDSLNDLVGEIVITESMVTSSPVLRMLPQESLDNFMKSARQLRKLTDDLQDIA 359 Query: 322 MSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNS 381 MS+RM+ + VF + R+VRD+ KLGK V+LT++G TE+DK++++ I DPL H+VRNS Sbjct: 360 MSLRMVSISGVFQKMNRIVRDMKQKLGKDVKLTIIGEDTEVDKTIVDSIQDPLMHIVRNS 419 Query: 382 LDHGIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT 440 +DHGIE E+R+AAGK+S G LILSA H + I V DDG G++ E++L KA +G+ Sbjct: 420 MDHGIEETKEERIAAGKDSQGELILSASHTSSEVIITVQDDGYGMDPEKLLDKAEEKGIL 479 Query: 441 --VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTG 498 S E LI PGFST VT+ SGRGVGMDVVK+N++ +GG + I S+ G G Sbjct: 480 YKPRSEYSKKEALGLIMLPGFSTNTAVTEFSGRGVGMDVVKKNLESVGGTISISSEIGKG 539 Query: 499 TTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEY 558 +T + +PLTLAI+DGM V V D +F +P+ + +S + ++++ G +++ + Sbjct: 540 STFTMKIPLTLAIMDGMKVNVGDTIFTIPIVNIRQSFKVDDSEVVFDENGNEMVKRMDVF 599 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYR--- 615 PI+ L + + G T+ G+++ +++G + L VD LIG+ QVVVK L + + Sbjct: 600 YPIIRLNNFYGIEGKYTDLQDGVLIWVEAGDKSCCLFVDDLIGEQQVVVKPLPAYFNAYD 659 Query: 616 -KVPGISAATILGDGSVALIVDVSALQAIN 644 K GI+ +ILGDG++ +I+DV L + Sbjct: 660 LKSSGINGCSILGDGNICIILDVLGLYSQA 689 >UniRef50_Q2SFX8 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFX8_HAHCH Length = 709 Score = 547 bits (1409), Expect = e-154, Method: Composition-based stats. Identities = 222/709 (31%), Positives = 356/709 (50%), Gaps = 72/709 (10%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D S + F E+ +LLA+MEQ LL L+ E E ++A+FRAAH+IKG G FG Sbjct: 1 MSLDFSGALKAFAQESKDLLAEMEQSLLTLEEEGAKKELVDAVFRAAHTIKGSGGLFGLD 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA----------YKQSQE 110 + TH +E +LD R G + ++ D+I+L L D + +++ ++ Sbjct: 61 HVVAFTHDVEGVLDAVRDGRLDIDGDLISLLLSCGDQIGRLVESSLAGEVEEALLRKGAA 120 Query: 111 PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 A Y+ A+ A E + R ++ +D P I+ G Sbjct: 121 LQAQLQRYLPGAVMVAAQEEDAGEAAYGARGWHISLRCGRDLLRDGMDPLSILHYISTLG 180 Query: 171 EVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 E+ + GH+ ++ + L L + A+++I FV + ++ V Sbjct: 181 ELTRVTTFCGHMPAAEEMDPESCYLAFEIDLITEQAKEEIEDAFEFVSASSEVRITPVGD 240 Query: 229 SPKISTPPVLKLAAEQ-------------------------------------------- 244 +Q Sbjct: 241 PDSWDGAIEAAPDEDQRLGEILLDSGAVTRNELEQALKQQERTPERPKLGEILVARHAVQ 300 Query: 245 ----APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + + + + ++V +K+D LINL+GEL+I + + R+ + Sbjct: 301 EKTVSTALEKQASAVKKQRQDSFLKVDAQKLDHLINLIGELMIANAEVRVRAERIQESV- 359 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 L S+ R +++ +S+RM+ + F+R+ R+VRDLA LGK + L + G T Sbjct: 360 --LHESVANSTRFIEAVRDCALSLRMVQIGDTFNRFQRVVRDLARDLGKDIRLVVSGGDT 417 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 +LDK+L+ERI +PLTHLVRN++DHG+E R GK + G + L+A H+ G+I IEV+D Sbjct: 418 DLDKTLVERISEPLTHLVRNAIDHGVESDALRRERGKAATGVIRLNAFHERGSIVIEVSD 477 Query: 421 DGAGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 DG G+N E+I+AKA + L SE MSD ++ LIF PGFSTAEQVT+VSGRGVGMD VK Sbjct: 478 DGGGMNPEKIVAKAIEKQLIRSSEGMSDGDIFKLIFEPGFSTAEQVTNVSGRGVGMDAVK 537 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 + ++++ G VE++S+ G G+TIR+ LPLTLAI++G V V D +++P+ V E ++ Sbjct: 538 KTLEELRGSVEVESELGKGSTIRLRLPLTLAIINGFLVGVGDSKYVVPMEVVDECVELNG 597 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 GG + +RG LP + L ++F++ G + + VV++Q GRR L+VD+L Sbjct: 598 D------GGGDFMGLRGMALPFLRLRELFSIDGRPAD--RQSVVVVQYAGRRAGLVVDRL 649 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 +G+ Q V+K L + + +S T+LG G V LI+D+ L + Sbjct: 650 MGELQTVIKPLGDIFTPLKWVSGCTLLGSGDVGLILDIPELVTRAEHAQ 698 >UniRef50_B9KS14 Chemotaxis histidine protein kinase n=10 Tax=Alphaproteobacteria RepID=B9KS14_RHOSK Length = 655 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 211/660 (31%), Positives = 331/660 (50%), Gaps = 20/660 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F EA +L+ +E+ LL L D + +NA+FR H+IKG FGF+ + Sbjct: 4 DDMMAVFRQEATDLIESLERGLLDLSDSPEDRDLINAVFRDLHTIKGSGAMFGFADMAAF 63 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H E+ D R G+ + +II L L +D E + +PD + Sbjct: 64 VHAFESAFDLLRSGKAVVTPEIIRLALSARD---EIIGFLADEPDPDRRRPAILSALEAA 120 Query: 126 LALEAKGETPSAVTRLSVVAKSEP-----QDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + P+ ++ + ++L+ L+ + +L Sbjct: 121 VGGSGVAPGPAVAAAAGEAPPADRLWFRLSGNALALGARPDLLLAELRELGATDIRADLS 180 Query: 181 HLTTLTDVVKGAD--SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + L + S P + + I V F ++ V S Sbjct: 181 AVPPLDALDPEVCMIGWSMSFPNRVTREAIDNVFLFNEVDLRLEAAPATVPAAASASAPA 240 Query: 239 KLAAEQAPTGRVER---EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 A P + E T ++RVA E++D L++ VGELVI + L Q + + Sbjct: 241 PAATPSPPAAAPRKAVDEATGADKAGATMRVAAERLDHLMDRVGELVIADARLLQLAHQS 300 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 L+ + ++ R A L+++ M IRM+P+ + R+ RL+ L+ +GK V + Sbjct: 301 RDPA---LMAAAEEISRLAAGLRDTTMRIRMVPVRSMVGRFRRLIHGLSEMVGKPVSFVV 357 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 +G TELDK++IE++ DP+ H++RNS+DHG+E P R AAGK + G + L AE G + Sbjct: 358 LGEETELDKTVIEQLADPIVHMLRNSVDHGLEAPADRAAAGKPAEGRITLEAEQSGAEVV 417 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I ++DDG GLNRERI AKA + G+ + +++ + LI PGFSTAE +T++SGRGVG Sbjct: 418 IRISDDGRGLNRERIRAKAIANGIIGPDAILTESAMNALILEPGFSTAEAITEISGRGVG 477 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVK+ I+ + G +E+QS +G GTT + LPLTLAI++G+ V VA E F +PL AV E Sbjct: 478 MDVVKKTIEGLRGSIEVQSVEGRGTTFTLRLPLTLAIIEGLLVEVAGERFSIPLAAVQEI 537 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYAL 594 ++ G L+VR +P+V L ++F+ G E VVI+++G R Sbjct: 538 VELPPDR-REEDGSADFLDVRDRLVPLVRLRRIFSSPGMPDEFQ--TVVIVRAGETRAGA 594 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +VD++IG +Q+V+K + + + S ATILGDG+VALI+DV L + + AA Sbjct: 595 VVDRIIGTNQIVIKQMSRLHGGIRAFSGATILGDGTVALILDVPHLAGVGQGVEDRRGAA 654 >UniRef50_A6W4R5 CheA signal transduction histidine kinase n=7 Tax=Actinomycetales RepID=A6W4R5_KINRD Length = 822 Score = 546 bits (1407), Expect = e-153, Method: Composition-based stats. Identities = 201/650 (30%), Positives = 330/650 (50%), Gaps = 15/650 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D+ + Q F E+ E L ++ L+ L+ + E L ++FR H+IKG +G FS Sbjct: 1 MDDMDEIVQEFLVESYENLDQLDSDLVALEQQPGSRELLASVFRTIHTIKGTSGFLAFSR 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L+ H+ ENLL R G++ + ++ L D ++ L ++S D + Sbjct: 61 LEAVAHVGENLLARLRDGQLVMTPVTTDVLLRMVDTIRLLLTKIEESHTEDGVEVAAVVA 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 A+R + P++ V + ++ + E Sbjct: 121 AIRAVLDGEVPVLPASDGAGVEVVSEPAPAAAPAPAPVAETAPAPVEVAPAPVAEVVPEP 180 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + + + P +A V A + V+ Sbjct: 181 VVEAAPAPVEVAPVVEVAPEPVAAPAPVEAAAPVEVAPVVEVAPEPVAVPAPAAHAAPAP 240 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 AP E+ ++IRV VE ++ L+ GELV+ ++ + QR+ L Sbjct: 241 GAPAPGAPAEKASAAE----STIRVDVELLESLVRQAGELVLARNQILQRAGALRD---E 293 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 DL + +L A ++QESVM RM +++++S+ PR+VRDL L ++++L + G TE Sbjct: 294 DLTRACHRLNLVASEMQESVMRTRMQAIDHLWSKLPRVVRDLGNMLNRKIKLEMEGGDTE 353 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD++L+E + DPLTH+VRN++DHGIE PE R AAGKN VG L L A H+GG + +E+ DD Sbjct: 354 LDRTLLEAVKDPLTHIVRNAVDHGIESPEVRTAAGKNEVGTLKLRAAHEGGQVVVEIRDD 413 Query: 422 GAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 G G++ I AKA +GL + E+++ +++ +F PGFSTA +VT+VSGRGVGMDVV Sbjct: 414 GKGIDPTIIGAKAVEKGLVSAAKLESLTPNDILQFLFLPGFSTAAKVTNVSGRGVGMDVV 473 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 K NI+++GG V+++S G GT R+ +PLTLAI+ ++V A + + +P ++E + Sbjct: 474 KTNIERIGGSVDVESVVGQGTVWRLRIPLTLAIVPALTVECAGQRYAMPQVNLLELVSLD 533 Query: 539 EADL---HPLAGGERVLEVRGEYLPIVELWKVFNV--AGAKTEATQGIVVILQSGGRRYA 593 + GG +V +RG LP++ L + + T ++ +L+ GRR+ Sbjct: 534 TERMSKAIEDVGGAKVYRLRGALLPLIRLEEALELKRPADVELPTNLVIAVLECDGRRFG 593 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 LLVD+++ ++VVK L + + + ATILGDG V+LI+DV +L Sbjct: 594 LLVDRVLDTEEIVVKPLSGALKAIGAYAGATILGDGRVSLILDVQSLARR 643 Score = 59.5 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 6/94 (6%) Query: 513 DGMSVRVAD-EVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF--- 568 + V + +PL+ V + + + + G V+ RGE LP+V L Sbjct: 669 RLLVVGLGGNRRVAIPLDVVTRLEEFKTDSIERV-GRREVVRYRGEILPLVRLANHLGGG 727 Query: 569 -NVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 + E T V+ + GR A++VD+++ Sbjct: 728 SRSSYGGEEVTSLPGVVYSARGRSVAIVVDEIVD 761 >UniRef50_C0GMS0 CheA signal transduction histidine kinase n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GMS0_9DELT Length = 925 Score = 545 bits (1406), Expect = e-153, Method: Composition-based stats. Identities = 189/652 (28%), Positives = 319/652 (48%), Gaps = 73/652 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 Q F D+ ++M+ L L+ E D E ++ ++R+ +++ G GF L+ Sbjct: 339 DPQDLQIFRQTVDQQFSNMKHALDKLEKEGTDKELVDGLYRSLVTVQNSTGYMGFEELKN 398 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 NL+D+ R+ + + + + + DI++ ++ + Sbjct: 399 YASNTANLVDQGRKTDTDFSL-MHGILKQEVDILESMINRHLSGLSSTVQDL-------- 449 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + +P + S P+ A ++ ++ Sbjct: 450 --------PAQPSPEPDRETSAEKPSEASRVSSDPQEEAEPFAPAMDIPEQQQAQAASQA 501 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 Sbjct: 502 GESAEPSG-----------------------------------------------AGKSA 514 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH---- 300 E + ++ + +++IRV K+D+L+NL+GEL+I ++ A S L+ Sbjct: 515 DQGAGSEPQAKSQGSTTSTIRVDHGKLDELMNLIGELIINRNRFAMLSRSLEEGQDVMEV 574 Query: 301 -GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 L + + R + DLQ ++M++RM+P+ VF+++PRLVRDL+ K K ++L G Sbjct: 575 AQQLNETTNSMARISDDLQVTIMNVRMVPVRSVFTKFPRLVRDLSRKNNKNIQLITEGEE 634 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDKS++E I DPL HL+RN++DHG+ELP++R GK G + L A H+G ++ IE+ Sbjct: 635 TELDKSVVELIGDPLVHLIRNAVDHGLELPQERKDRGKEEKGTVWLRAAHKGNSVVIEIE 694 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ E++ AKA +G+ E M +D+ LIFAPGFSTAE +TDVSGRGVGMD Sbjct: 695 DDGKGIDPEKMKAKAVEKGIIDREEARNMEEDQAVDLIFAPGFSTAETITDVSGRGVGMD 754 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK NI+ + G++ + S G GT I LPLTLAI+D + V+V +V+ +PL+AV E+ + Sbjct: 755 VVKNNIKSLKGNISVTSAVGQGTRFSIALPLTLAIIDALMVKVNGQVYAIPLDAVSETTK 814 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 + L+ + + V+ +RGE L I +L ++ + + + + +VI++ G RR +V Sbjct: 815 IQAGRLNEINNRK-VITLRGEVLGISDLAELLELPVDQADRDELPLVIIKVGDRRMGFIV 873 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 + L+ + +VV+K+L PGIS ATI+GDGSV LI+D + + I + Sbjct: 874 EDLLERQEVVIKSLGEYLGDQPGISGATIMGDGSVVLILDPNEIYRIATSRS 925 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 3/210 (1%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 MS D + Y F EA E L +E LL L+ + LN IFR HS+KG +G G Sbjct: 1 MSQDFFDPEVYSDFVVEAREHLETIEPKLLELENNPGNLSLLNDIFRPMHSLKGASGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 + H EN+LDE R+G +Q N+ I++L LE D ++ +D + + + Sbjct: 61 LKDMNALAHKGENILDELRQGRIQANSSIMDLILEATDALRTMVDNLESMGHEGSLEVGH 120 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK-AGEVDLLEE 177 I + + ++ + S V + + + Q+ ++S + ++ +E Sbjct: 121 IIEHIDEILKNKDEQASSGAPAQEVQKEEQDFSHPAAEQNYLLNMVSLDHLSDFIEEAQE 180 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDD 207 L + +L ++ + S D+ + Sbjct: 181 NLTAINSLLLEMEKGEGSSQDRINDLFRNF 210 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 57/318 (17%), Positives = 116/318 (36%), Gaps = 9/318 (2%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQP-EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D F +EA E L + LL ++ E +++N +FR H++KG +G G+ L Sbjct: 169 DHLSDFIEEAQENLTAINSLLLEMEKGEGSSQDRINDLFRNFHNLKGNSGIIGYIELNAL 228 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALR 124 H +E L+ R GE L+ + +++ LET D+++ L +++ E S I ++ Sbjct: 229 AHEVETFLNTIRSGEQVLDPEAVDVLLETVDVLESLLGNIDRETGEVQPESISGITSRIK 288 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +L + A+ E E +Q+P ++ + G+ D + Sbjct: 289 ELKKRFQVHQDEEDKAKDNGAREE--AENIFAQAPADNEVAGQQQGDNDPEVDPQDLQIF 346 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 V + ++ L E ++ + + + A Sbjct: 347 RQTVDQQFSNMKHALDKLEKEGTDKELVDGLYRSLVTVQNSTGYMGFEELKNYASNTANL 406 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 GR + + ++ V+ ++ +IN L S + ++ P + Sbjct: 407 VDQGRKTDTDFSLMHGI--LKQEVDILESMINRH--LSGLSSTVQDLPAQPSPEPDRETS 462 Query: 305 -TSMGQLQRNARDLQESV 321 + R + D QE Sbjct: 463 AEKPSEASRVSSDPQEEA 480 >UniRef50_Q1MP79 Chemotaxis protein histidine kinase and related kinases n=2 Tax=Desulfovibrionaceae RepID=Q1MP79_LAWIP Length = 737 Score = 544 bits (1403), Expect = e-153, Method: Composition-based stats. Identities = 195/641 (30%), Positives = 318/641 (49%), Gaps = 64/641 (9%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F + + + L L ++ E ++A++R+ SI+ AG G+ L+ Sbjct: 137 AFAVTVKQQQSTIHAALEALAQDSSQREYIDALYRSLISIQNAAGVMGYDELKVYAERTA 196 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA 130 L+ + R + + ++++ + I+ + + S I Q +++ Sbjct: 197 GLVAQGRDSGIDFSL-MLDILTQEVAIVDDMIAVILAGDGITQLSSSPIEQ--KEVLSSQ 253 Query: 131 KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK 190 G T V+ VV+ +S S S + Sbjct: 254 DGNTTDTVSSTPVVSAEHLTSLKSSSLSTQESP--------------------------- 286 Query: 191 GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV 250 ++ + Sbjct: 287 ---------------------GQIESHVPSKPGPVLKTISNVPKNIKPPSVKSSQAKPAN 325 Query: 251 EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN--------HGD 302 + T+ S++IRV EK+D L+NL+GEL+I ++ + L+ D Sbjct: 326 ANDATSEQKSSSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEEQGTNADVVEVAQD 385 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L + + R + +LQ+++M +RM+P+ VFSR+PRLVRDL+ K GK+V+L L G TEL Sbjct: 386 LSETTYAMARISDELQDTIMKVRMVPVASVFSRFPRLVRDLSRKSGKEVDLVLEGEETEL 445 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 DKS++E I DPL HL+RN++DHGIE +R+A GK++ G + L A H+G ++ IE+ DDG Sbjct: 446 DKSVVEVIGDPLVHLIRNAVDHGIEPESERIAQGKSTKGKVTLRAYHKGNSVAIEIEDDG 505 Query: 423 AGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 GL+ +++ A +G+ +E + D E LIFAPGFS+AE++TD+SGRGVGMDVV+ Sbjct: 506 KGLDPDKLREVAIKKGILSAEEAKLLDDREAMELIFAPGFSSAEKITDISGRGVGMDVVR 565 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 NI+ + G + I S+ G GT + LPLTLAI+D + V VA EVF +PL+AV E+ + Sbjct: 566 TNIKNLKGSISIFSEIGKGTRFTLSLPLTLAIIDALMVNVAGEVFAIPLDAVSETTKLEA 625 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + L+ + G + V +RGE L ++EL ++ N+ + VVI+ S RR L+V++L Sbjct: 626 SKLNDINGRKAV-TLRGEVLGLIELSELLNLPQEEH-TDVLSVVIIHSNERRLGLVVNKL 683 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 + + ++V+K L S +P IS ATI+GDG V LI+D + Sbjct: 684 LERQEIVIKPLGSYLGDIPCISGATIMGDGGVILILDPHEI 724 >UniRef50_Q7NZA8 Chemotaxis protein CheA n=2 Tax=Betaproteobacteria RepID=Q7NZA8_CHRVO Length = 737 Score = 544 bits (1401), Expect = e-153, Method: Composition-based stats. Identities = 233/724 (32%), Positives = 344/724 (47%), Gaps = 80/724 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+ QTF +E+ ELL +ME LL ++ E AEQLNA+FR H+IKG AG FG + Sbjct: 1 MDLEQALQTFLEESRELLDEMESILLDVEAEQTSAEQLNALFRTMHTIKGSAGLFGLDAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLF-------------LETKDIMQEQLDA----- 104 TH ENLLD+ R G+++L+ +++ L L D ++ D Sbjct: 61 VRFTHQAENLLDQLRDGKLKLDDELVGLLLRCHDHVKMLIQALAAGDPLEALRDEPLEAA 120 Query: 105 ----------------------------------------YKQSQEPDA--------ASF 116 + +P + + Sbjct: 121 LLAYLAAPQQAMPPPREEAPAAAALRTERWLLSLRFGPDVLRNGLDPSSFIRYLSTLGTV 180 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + I +L + + R ++ +S+ + S L + Sbjct: 181 ERIRAIACRLPRGGDFDAETNYLRFELLYRSDIGAQALHEVFEFVREDSELFILPLQAAA 240 Query: 177 EELGHLTTLTDVVKGADSLSAI------LPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 L + + + A P E+ A + E P Sbjct: 241 VSLREACATAEPDEAQEVALAWRQFGAPDPSSGPENAPAAASDPAPGSPPPPAEADAPGP 300 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 P + R ES I+V K+D LINL+GELVI + Sbjct: 301 AQPPPRQADAEPHPEIHAAAGETRGGRGGESRFIKVEAGKLDSLINLIGELVIAGASANL 360 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + L+ + + ++ +S+RM+ + +F R+PR+VRD++ +LGK+ Sbjct: 361 IARRSQQT---QLVEATLGIANLIEQIRTGTLSMRMVQIGEIFHRFPRVVRDVSRELGKE 417 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 ++L +VG+ TELDKS++E++ DPL H+VRN++DHGIE R A GK + GNL L+A H+ Sbjct: 418 IQLRIVGAETELDKSMVEKLGDPLLHIVRNAIDHGIEPTAVRQANGKPAQGNLWLNAYHE 477 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVS 469 G++ IEV DDG GL+RERILAKA +GL + D V IF GFSTAEQVT++S Sbjct: 478 SGSVVIEVADDGGGLDRERILAKARERGLLGPDDEPPDSVVFQQIFEAGFSTAEQVTNLS 537 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV+R I+++ G+VEI S+ G GTT RI LPLTLAI+DG V VA F+LPL Sbjct: 538 GRGVGMDVVRRGIEQLHGNVEIDSEAGLGTTFRIRLPLTLAIIDGFLVEVAASTFVLPLE 597 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGG 589 AV+E ++ P G + +RGE LP++ L F + + VV++Q G Sbjct: 598 AVIECIELPAD--LPENGVHDCINLRGELLPLLRLDHFFELPPVPAV--RRNVVVVQYGD 653 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 R+ L+VD L G+ Q V+K L + + + IS +TILG G VALI+DV +L + Sbjct: 654 RKAGLVVDALQGEFQTVIKPLGALFNTLKAISGSTILGTGEVALILDVPSLIQHACRRES 713 Query: 650 ANTA 653 A Sbjct: 714 ERFA 717 >UniRef50_UPI00016C4BDB putative CheA signal transduction histidine kinases n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4BDB Length = 795 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 208/650 (32%), Positives = 314/650 (48%), Gaps = 28/650 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 +D F EA E L++ E LL L+ A+ + +FRA HSIKG A G + ++ Sbjct: 145 ADALAQFTAEALESLSEAEAALLDLETGTDPADAVRRLFRAVHSIKGTADYLGLAQIRAL 204 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H +EN+L+ AR G L+ L L+ D ++ + A + E + Q Sbjct: 205 SHKLENVLELARSGGAALDAPAAELVLQGVDHLKAMVAALTPAGEVARDMNAFAAALDAQ 264 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A A P A + + R + L A L L HL+ Sbjct: 265 SARGATEPAPGAPLDALAEELKAAANGSREGLARVRAAAAALPAEPAGELLALLDHLSAA 324 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 + + A E + + + PP +A Sbjct: 325 RERLVAAFE--------------------PDEPEPVLVAPPPQQQPAAAPPPAANLVPKA 364 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS--ELDPVNHGDL 303 + + ++RV K+D+ +NL GELVI ++ L + D L Sbjct: 365 APPDPAAGANKAAPAAKTMRVDQRKLDEYVNLAGELVIARNALVHAHRCFQTDRAARAVL 424 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 ++ ++ R D+Q + M++RM+P+ +F R+PRLVRD+A L KQ+EL L G TELD Sbjct: 425 KDAIDKVCRIVGDVQNNAMAMRMVPVGTIFQRFPRLVRDVAKSLAKQIELRLEGEDTELD 484 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 K + E + DPL HLVRN+ DHGIE P++R AAGK G + L A +G I I+V DDG Sbjct: 485 KQVAEALSDPLVHLVRNAADHGIEAPDRRAAAGKPVAGTVTLRAGREGNAIVIDVQDDGG 544 Query: 424 GLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++ ER+ AKA + G+ ++ +S ++ LIFAPG STA V+D+SGRGVGMDVVK Sbjct: 545 GIDPERVKAKAVAMGVLTADQAAALSREQALQLIFAPGLSTAAVVSDLSGRGVGMDVVKS 604 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI +GG V + S+ G GT +R+ LPLTLA+ + V +F +P++AV E+L+ Sbjct: 605 NIAALGGAVTVHSQPGAGTRVRLTLPLTLAVTTVVLVESGGTLFGVPIDAVQETLKVEPD 664 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKV--FNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 L G V +RG P+ L + + A + VV+L G R+ + VD Sbjct: 665 GFRQLRGVRAV-SLRGAVTPVKSLAALIGLDAPEAAGPRDRVPVVVLNVAGARFGVAVDS 723 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 GQ ++V+K + + G+ ATI+GDG V LI+D L + + R Sbjct: 724 FRGQQEIVLKPVPPLLGHLEGVGGATIMGDGGVVLILDPMGLYRLALDDR 773 >UniRef50_C8WWG9 CheA signal transduction histidine kinase n=3 Tax=Alicyclobacillus acidocaldarius RepID=C8WWG9_ALIAD Length = 664 Score = 543 bits (1400), Expect = e-153, Method: Composition-based stats. Identities = 198/667 (29%), Positives = 329/667 (49%), Gaps = 33/667 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ + F E+ E + +E L L+ E + L+ +FRAAH++KG + T GFS L Sbjct: 3 DEYLEAFLAESMENVERLEAFCLTLEREGSKPDLLDEMFRAAHTLKGMSATMGFSKLAAL 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY----KQSQEPDAASFDYICQ 121 TH +E+LL R ++L ++ L D M+ ++ A K+ EPD + D + Sbjct: 63 THRVEDLLGTLRDERVRLEPRHVDALLLAVDRMRARIQAIGVSAKEPDEPDDDAMDALAG 122 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE---------- 171 ALR A + ++ + + + I L+ Sbjct: 123 ALRGGADVGGTREEDSKPFANLSDWANRAAAEGKELYTVHIRLAPDCVMPGVRLAMAYQA 182 Query: 172 ----VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 L+ + V+ ++ +A++ D + + V + V Sbjct: 183 LKASAILMAAHPAEENVMAGQVEATEAFAAVMVAPGEIDRVRQGVLDVTDVSSCEVSKVS 242 Query: 228 VSPKISTPPVLKLAAEQAPTGRV-------EREKTTRSNESTSIRVAVEKVDQLINLVGE 280 S + AP ++RV V KVD L+N + + Sbjct: 243 ESHSAPKEDAPRAEQGDAPIEPRVSRHANGSSPAGADLRRDATLRVPVRKVDALMNTLSD 302 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LVIT++ LA S D L ++ +L R D+Q+ +M +RM+P+E +F RYPR++ Sbjct: 303 LVITKTRLATLVSSADDPA---LKEAVERLDRLTGDIQDGLMRLRMVPVETIFHRYPRMM 359 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDL +L ++ + + G TE+D+ ++E + + + HL+RN++DHG+E PE R + GK Sbjct: 360 RDLEHRLQREFDFVMTGLDTEMDRVVLEEMGEVIVHLLRNAVDHGLEPPEARESQGKPRR 419 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAP 457 G + L+A G++ +EV+DDG G++R R+L A ++G E MSD+ V L+F P Sbjct: 420 GIVRLAAYTASGHVYLEVSDDGRGIDRGRVLETAVAKGWITPEEGAAMSDESVYALLFRP 479 Query: 458 GFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSV 517 GFSTAE+V+D+SGRGVG+D V+ ++ +GG + + S G GTT I LPLTLAIL + V Sbjct: 480 GFSTAERVSDISGRGVGLDAVREKVEALGGQIRLNSVLGAGTTFTIELPLTLAILSALLV 539 Query: 518 RVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA 577 V +VF +P V E + D+ + V + +PIV+L + + G++ +A Sbjct: 540 SVRGQVFAIPTANVDEVRRVTRDDVRHVQER-PVFQDSAGIVPIVDLAERLGL-GSRRDA 597 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 V+ + G RR AL+VD ++ + ++V K L + V + ATILGDG V+LI+DV Sbjct: 598 YPQTAVVCRDGKRRLALVVDHVLDELEIVNKPLGRYLQGVREFAGATILGDGRVSLILDV 657 Query: 638 SALQAIN 644 ++ Sbjct: 658 RSIANPA 664 >UniRef50_A4BD11 CheW-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BD11_9GAMM Length = 764 Score = 543 bits (1399), Expect = e-153, Method: Composition-based stats. Identities = 221/752 (29%), Positives = 352/752 (46%), Gaps = 100/752 (13%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M + F EA+ELL +ME LL L+ + + E +N++FRA H+IKG AG F F+ + Sbjct: 1 MSEESVHHIFQTEAEELLVEMEDALLALEDDPTNQELVNSLFRAMHTIKGAAGVFNFNHI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH +E +D R+G+ +++++I L+ KD +++ + + +A Sbjct: 61 TEFTHPVETEVDLIRQGQRTVDSNLIATLLKIKDHTWALVESAVDGDGSLSNALYETGEA 120 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE---- 178 L Q + P+A + + + + + R + + A + +E Sbjct: 121 LLQELQGERSVAPAAKANTATSSVERAPESSTSNGHSRANPIEEMFAHDFHDDDEPPESD 180 Query: 179 -------------------------------LGHLTTLTDVVKGADSLSAILPGDIAEDD 207 L +L + D+V + ++ D Sbjct: 181 GRMDSDQWFISLDFQADALRNGLDPASFISYLSNLGDINDIVTLTHRVPSLEKADFESCY 240 Query: 208 ITAVLCFVIEADQITFETVEV------SPKISTPPVLKLAAEQAPTGRVEREKTTRSNES 261 + + FV +A + E V + I P + E E + Sbjct: 241 LGFRIAFVSQASKADIEAVFEFALDDCTVSILPPHSKVATYLKQIEDLPELESLRLGDIL 300 Query: 262 TSI-RVAVEKVDQLINL--------------VGEL----------VITQSMLAQRSSELD 296 SI V ++++ +NL +GEL VI +++ Q+ S Sbjct: 301 LSIGAVTKAELERALNLQSSDENGATEERKKIGELLVEQKVIEQPVIERALKKQQKSREQ 360 Query: 297 PVNHGDLITSMGQLQRNARDL---------------------------------QESVMS 323 +GQL +L ++ + Sbjct: 361 SQTIRVDSNKLGQLINLVGELVTSSAAMKIVVERYHMRDADEVVAGMEHLVEEIRDHALQ 420 Query: 324 IRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLD 383 +RM+ + FSR+ R+ RD++ +LGK+++L + G +ELDK+++E+I DPLTHLVRN+LD Sbjct: 421 LRMVQIGDTFSRFRRVTRDVSNELGKKIDLVISGGESELDKTVVEKINDPLTHLVRNALD 480 Query: 384 HGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE 443 HGIELP +RLAAGK G + L+A H G+I IEV DDG GL+ E+I AKA GL Sbjct: 481 HGIELPSERLAAGKPEAGTITLNAFHDSGHIVIEVIDDGRGLDPEKIQAKAEKVGLIEPG 540 Query: 444 -NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 +S E+ L+F PG ST EQ +++SGRGVGMDVV+RNI+ + G VE+ S G GT I Sbjct: 541 VTLSRAEIFRLVFEPGLSTKEQASNLSGRGVGMDVVRRNIEALRGSVELDSNVGKGTHIT 600 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I LPLTLAI+DG V E +++PL+ V E ++ D + G + +RGE +P V Sbjct: 601 INLPLTLAIIDGFMVGAGHERYVIPLSMVEECVEFNNGDWYEEKGQSNFINLRGEVMPFV 660 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L F V + + +V+++ G + +VDQL G+ Q V+K L ++ + G+S Sbjct: 661 RLRTFFQVPQRQQRQHRESLVVVRMGRHKAGFVVDQLFGEQQTVIKPLGDIFQHLKGVSG 720 Query: 623 ATILGDGSVALIVDVSALQAINREQRMANTAA 654 ATILG G +ALI+DV L + Q ++ A Sbjct: 721 ATILGTGDIALILDVQGLLTLAGNQHAHHSQA 752 >UniRef50_D2R1M2 CheA signal transduction histidine kinase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1M2_9PLAN Length = 921 Score = 542 bits (1398), Expect = e-152, Method: Composition-based stats. Identities = 207/657 (31%), Positives = 326/657 (49%), Gaps = 45/657 (6%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ F EA E LAD+E LL ++ ++P+ E ++ +FR HS+KG AG G Sbjct: 1 MNDADQQIVNDFVIEASEHLADIENQLLSIEASADSPNVELVHEVFRNVHSVKGVAGFLG 60 Query: 59 FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118 F+ + H +E++L+ R GE++ +I L D +++ + D Sbjct: 61 FASVGSLAHSLESVLNMVRGGELRPQGVVIETLLSGFDTLRQMVHHI---DRVDDFDVTG 117 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 L+++ AK + + + + + + + S L+A +L Sbjct: 118 HVNQLQEIMNVAKIAPSAGELAAAGTSGGSAASQHPLDLAQQFVTDSGLQADPNAILASL 177 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + A S + P ++ + Sbjct: 178 REQMEPAAAPKANAQS--------------------------SQQPKIASEPAPTSDAAI 211 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 A E + S +IRV V +D+L+NL GELV+ ++ L Q Sbjct: 212 NSKISAANGAAAESTPSKGSAADANIRVPVAILDRLMNLAGELVLGRNQLLQILQNKSGA 271 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 L T +L + +LQE++M+ RM + VF+R+PR+VRD++ KLGKQ L L GS Sbjct: 272 G---LDTVGARLDQVTTELQEAIMNARMQQVGTVFNRFPRMVRDVSQKLGKQCRLQLEGS 328 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 ELDK+++E I DPLTHL+RN++DHGIE PE R GK+ G L + A HQ G + I V Sbjct: 329 EVELDKTILENICDPLTHLIRNAIDHGIERPEVRAREGKSEAGTLTIRAFHQAGKVHITV 388 Query: 419 TDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGM 475 +DDG G++ + + K +G +E+ +SD E LIF PGFSTAE VT+VSGRGVGM Sbjct: 389 SDDGGGIHPQNLRDKGVRKGWFSAEHAASLSDREALRLIFRPGFSTAEVVTEVSGRGVGM 448 Query: 476 DVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL 535 DVVK NI+K+GG VE+ S G GTT+ + LPLTLAI+ + V E + +P ++++E + Sbjct: 449 DVVKTNIEKLGGTVEVDSTPGAGTTVHVKLPLTLAIIPSLIVGSCGERYAIPESSIIELV 508 Query: 536 QPREAD---LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE-----ATQGIVVILQS 587 + D G L +RG LP+V L + + + KT + +++++ Sbjct: 509 RFTPGDKSMRVERFQGAEALRLRGTLLPLVRLSSLLSTSSKKTPIATDTSRAHNIIVVEG 568 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 G RY ++VD ++ Q+VVK L + + ++ AT+LGDG VA I+D+ + A Sbjct: 569 GVVRYGIVVDAVLDPEQIVVKPLGRHIKSCRCLAGATVLGDGQVAFILDIPGIAAHA 625 Score = 45.6 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 6/123 (4%) Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 ++F P+ V + + + +L+ RG LP+V+L + Sbjct: 660 GDLFAAPMAMVSRIEKIGREQVDRVESR-LLLQYRGGTLPLVQLE---PGTQREELPESV 715 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V++ Q G L+V ++ +++ + G ++ +G V ++DV L Sbjct: 716 YVLVFQVKGYEMGLIVPLIVDICDAS-TAVDTRVYREKGTMGVLVI-EGRVVRLLDVHEL 773 Query: 641 QAI 643 A Sbjct: 774 AAS 776 >UniRef50_B4SHY6 CheA signal transduction histidine kinase n=14 Tax=Xanthomonadaceae RepID=B4SHY6_STRM5 Length = 614 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 215/643 (33%), Positives = 334/643 (51%), Gaps = 33/643 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D F EA E+L + + L+ L+ D +QLNA+FR H++KGGAG G + Sbjct: 1 MSAVSDDITADFIIEAQEILDRLGEQLVSLEQAPQDGDQLNAVFRGYHTLKGGAGFLGVT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E H E L AR G+ L + ++ D +Q LDA EP A + I Sbjct: 61 AMVELCHAAEEALGAARAGQAVLQAHHFDAAQQSLDYLQSMLDAVSSGTEPGYAPPELIA 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 Q + + +P + E + L ++L Sbjct: 121 QF---------------------DVHGGATATPAAAAAPATGGSDLITDDEFEALLDQLH 159 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 T V + ++ D E + + + + + P Sbjct: 160 GGNAPTAVAPAKKADDGLISEDEFEALLDQLHGGAAPGTKPVAAVPAAAATPAPRPAAPA 219 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A + P + + ++RV +++D ++NL+GELV++++ L + L Sbjct: 220 PAAKPPAKPPAKPLAEAEH---TVRVDTKRLDAIVNLIGELVLSRNRLKTLRARLRD--- 273 Query: 301 GDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSST 360 +L ++ L LQ +VM RM P+ VFSR+P++ RD+A L K+V+L L+G+ T Sbjct: 274 EELDRAVSTLDIATARLQSAVMRTRMQPVGKVFSRFPKVARDVARSLKKEVDLELIGAET 333 Query: 361 ELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTD 420 ELD++L+E + DPL HLVRN++DHG+E PE R A GK +G++ LSA+ +G + IEV D Sbjct: 334 ELDRNLVEALADPLVHLVRNAIDHGVETPELREAQGKPRMGHVRLSAQQEGDYVSIEVQD 393 Query: 421 DGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DGAG++ E++ AKA +GL E +S +E L+F PGFST +QVTD+SGRGVGMDV Sbjct: 394 DGAGIDPEKLRAKAREKGLIDPEAAARLSSEECLHLVFLPGFSTKQQVTDISGRGVGMDV 453 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V+ I+++ G ++IQS+ G G+ I +PLTLAIL + V+ ++V+ LPL VME L Sbjct: 454 VQSRIRELSGQIQIQSELGRGSRFLIRVPLTLAILPTLLVQAGEDVYALPLARVMEVLHA 513 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 L G VL+ R L +V+L + +V A + +V+LQ+G R+ L+VD Sbjct: 514 PRTSLGWFDGR-AVLDRRSHTLALVDLRQWLDVTPAASPL--LTIVVLQAGEARFGLVVD 570 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 Q+ G+ +VV+K L R + G + AT++GDG +ALI+DV L Sbjct: 571 QVRGREEVVIKPLPKALRGLAGYAGATLIGDGRMALILDVDGL 613 >UniRef50_Q28NF4 Chemotaxis protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28NF4_JANSC Length = 748 Score = 542 bits (1397), Expect = e-152, Method: Composition-based stats. Identities = 218/712 (30%), Positives = 350/712 (49%), Gaps = 79/712 (11%) Query: 22 DMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEM 81 M ++ D E ++ +FRA HSIKGG+G FG L H E LD R G+ Sbjct: 23 AMHDGFGLMVNGEDDDETIHVVFRAVHSIKGGSGAFGLDDLVAFAHHFETALDRVRAGKT 82 Query: 82 QLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ---------------- 125 + + D+++LF D + + + A + + A + + + L + Sbjct: 83 ESSDDLLSLFQLCGDHLSDLVAAARNGDAVEPAQAEALSRQLDEVIGSPEDTDISETDAA 142 Query: 126 -------LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 +A + S A+ + + + + + Sbjct: 143 ETFEPLTFDFDAFDDPSSLPGIADDGAEDMRAGFNVTFVAEPELFSCGNEPALLFKALDR 202 Query: 179 LGHLTTLTDVVK-----------GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 G + D+ S L D ED I V FV + I ++ Sbjct: 203 YGRVQVAADLDDVPSLSRLDPTMPYMKWSIDLETDATEDVIRDVFDFVSDCAVIDIAPLD 262 Query: 228 VSPKISTPPVLK-------------------------------------------LAAEQ 244 S + E Sbjct: 263 RSGPPLSELPDPIADDGPGAVEPTLPQIAPVPPVQEAIVAKVEDTSAPPTPPESSPPQEV 322 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + +IRV E+VD+LINLVGELVI ++ML+Q +L+ N D++ Sbjct: 323 GASKPTAPDAAKTTAAPQTIRVDFERVDKLINLVGELVIKEAMLSQAVEKLNLTNGNDVL 382 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + L++ A ++QE VM+IR P++ +F R R +RD + GK+V LT+ G + E+DK Sbjct: 383 QEIEGLKQLAGEIQEGVMAIRAQPVKPLFQRMARTIRDASTTTGKRVRLTMKGEAAEVDK 442 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ER++DPL H+VRN++DHG+E E+R+AAGK + G + LSA H+ G + IE++DDG G Sbjct: 443 TVLERLVDPLNHMVRNAVDHGLESAEERIAAGKPAEGTVTLSAAHRSGRVVIEISDDGGG 502 Query: 425 LNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 +NR+++ A S+GL + + ++ EV L+F PGFS E+V+++SGRGVG+DVV+ I Sbjct: 503 INRDKVRQHAESRGLVLPDATLTPSEVDALLFMPGFSMKEEVSELSGRGVGLDVVRSEIS 562 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 +GG + I S+ G GT I LPLTLA+L+GM V VA + ++P+ A+ E+LQP A +H Sbjct: 563 ALGGRMSISSELGKGTDFSISLPLTLAVLEGMVVEVAGQTMVVPITAIQETLQPSTAQIH 622 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG-GRRYALLVDQLIGQ 602 + G RVL +R +PI +L +F + +++++++ +R AL+VD+L Q Sbjct: 623 TIGSGGRVLSIRNTLVPIEDLGAIFGFRDTPMDLDDRVLLVIETETEKRCALIVDRLQDQ 682 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 QVV+K+LE+NY V GI+AATILGDG +ALIVD + + T+A Sbjct: 683 RQVVIKSLETNYSHVSGIAAATILGDGRIALIVDPEDIAGGIALPQSCQTSA 734 >UniRef50_B8IQX9 CheA signal transduction histidine kinase n=3 Tax=Alphaproteobacteria RepID=B8IQX9_METNO Length = 878 Score = 542 bits (1396), Expect = e-152, Method: Composition-based stats. Identities = 202/657 (30%), Positives = 320/657 (48%), Gaps = 67/657 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D + F E E L ++ L+ + + + L IFR H+IKG G G L+ Sbjct: 1 MDDLLREFLTETGEHLDTVDLELVRFEQDPNNQTILRNIFRLVHTIKGTCGFLGLPRLEA 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E L+ + R G M + + + L L+T D ++ + +++ A + + + + Sbjct: 61 LAHAAETLMGKFRDG-MTVTREAVTLILQTLDRIKVIVAELERTAAEPAGADEDL---IG 116 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L ++GE P + + + LK GEV L Sbjct: 117 ALERMSEGEIP--------APAEPSSPAVTTGTLVPQTLERALKPGEVSL---------- 158 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + F P K AA+ Sbjct: 159 --------------------------------DDLERAFREAPGPAPELRPEPAKPAAKA 186 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P E ++ +IRV V+ ++ L+ +V ELV+T++ L + + + ++ Sbjct: 187 EPQPEGEGAAISK---VQTIRVNVDTLEHLMTMVSELVLTRNQLLEIARHHEDNSYK--- 240 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + +L +LQE VM RM P+ + + PR+VRDL+ +LG++++L + G+ TELD+ Sbjct: 241 VPLQRLSNVTAELQEGVMKTRMQPIGSAWQKLPRVVRDLSSELGRKIDLVMQGAETELDR 300 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++E I DPLTH+VRNS DHGIE +R AAGK G + LSA H+GG I IE+ DDG G Sbjct: 301 QVLEVIKDPLTHMVRNSADHGIESAAERKAAGKPEKGTIRLSAFHEGGTITIEIADDGKG 360 Query: 425 LNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 L+ I KA +G+ E M+D +VA IF PGFSTA+ +T VSGRGVGMDVVK N Sbjct: 361 LDLAAIRRKAVERGIATEAEVERMNDAQVAKFIFHPGFSTAKAITSVSGRGVGMDVVKTN 420 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+ +GG V+I+++ G GTT I +PLTLAI+ + V + F +P +V+E ++ + Sbjct: 421 IELIGGTVDIRTQFGQGTTFTIKIPLTLAIVAALIVSARNHRFAIPQVSVLELVRVQPGS 480 Query: 542 LHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKT--EATQGIVVILQSGGRRYALLVD 597 H + G VL +R LPIV + + + + +G VV+ Q G +R+ +LVD Sbjct: 481 DHTVERINGSPVLRLRDRLLPIVPIAGLLGLDTDAAAVSSDEGFVVVSQVGRQRFGILVD 540 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + ++VVK + + R +P S TILGDG+V LI+D + + + A Sbjct: 541 GVFHTEEIVVKPMSTKLRHIPLYSGNTILGDGAVVLIIDPNGVARMLGAASGQPGEA 597 Score = 49.9 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 41/94 (43%), Gaps = 10/94 (10%) Query: 511 ILDGMSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW--KV 567 + + + + +PL+ V + A + + GG +++ RG +P+V + +V Sbjct: 610 TVTLLVFKGGGDALKAVPLSLVTRLEEVDAAKVEWV-GGRPLIQYRGRLMPLVPVDPDQV 668 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIG 601 G++ +V+ G R L VD+++ Sbjct: 669 LRREGSQA------LVVFSDGERSMGLAVDEIVD 696 >UniRef50_C0QMJ8 CheA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QMJ8_DESAH Length = 736 Score = 541 bits (1395), Expect = e-152, Method: Composition-based stats. Identities = 208/647 (32%), Positives = 327/647 (50%), Gaps = 63/647 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S D + F EA E L +E +L+ L+ + + E +N IFR H+IKG +G + Sbjct: 152 SDDDMEILMDFVSEALENLDTIEVNLIDLEQDPSNMEIINDIFRPFHTIKGVSGFLSLTK 211 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + + H ENLLD AR GE +N D++ E +D K + Sbjct: 212 INKLAHATENLLDSARSGEFLINA-------RATDVILESVDTLKT-----------LIA 253 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + Q T + + D + + +S K + L + Sbjct: 254 RINQ------------GTDKGFMQPDDDIDVNDLRDKLQTLQVSLTKGNKEPLGSILVKK 301 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + + A PG + + K Sbjct: 302 RMVDQNALDQALDTQKNQPGKKIGEILVEG---------------------------KKV 334 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 + + R ++V+ +K+D L++ GELVI QSML Q +N Sbjct: 335 QANQVASALIEQNQPRKKVDAQVKVSTQKLDDLVDYAGELVIAQSMLKQ-----KTINDP 389 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L ++ QL + ++Q MS+RM+P++ F + RLVRDLA K GK+V L + G TE Sbjct: 390 SLSQNVSQLGQIVTNMQNIAMSMRMIPIKATFMKMIRLVRDLAKKSGKEVNLNMAGEDTE 449 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +D+++++ + +P+ H++RNS DHGIE RL GK S G +IL A H+GG+I IE+ DD Sbjct: 450 IDRNVVDALYEPMVHMIRNSCDHGIESASDRLEKGKPSQGEIILRAYHRGGHILIEIEDD 509 Query: 422 GAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G GL+++ IL KA GL E ++D +V LI PGFSTA+ +TDVSGRGVGMDVVK Sbjct: 510 GKGLDKKTILEKAKETGLITGNEQLTDAQVYDLILQPGFSTAKTITDVSGRGVGMDVVKS 569 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 I+K G + I S++G GT I LPLTLAI+DGM VRV +E +++P A+ ++ +P + Sbjct: 570 GIEKFRGQLNIASEKGRGTKFTISLPLTLAIIDGMLVRVDEEKYVIPTIAIQKAFKPGKE 629 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 D + G +++ RG +P++ L ++++ + K G+VV+++S + AL +D+L+ Sbjct: 630 DYFTIKGKGEMVKDRGSLIPMIRLNEIYDSSKHKKSVQDGLVVVVESKDEKRALFIDELL 689 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G+ + V+K+L SN +V GIS IL DG V LI+D+ + +I + Sbjct: 690 GKDEYVIKSLGSNLEEVNGISGGAILADGRVGLILDIHGIFSIVSKG 736 >UniRef50_A3J8A3 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8A3_9ALTE Length = 2176 Score = 541 bits (1394), Expect = e-152, Method: Composition-based stats. Identities = 172/659 (26%), Positives = 299/659 (45%), Gaps = 15/659 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA +L+ L ++ + R H++KGGA G + + Sbjct: 1384 DPELMGIFLEEAYDLINATGSALHSWSENPENSMLAAELQRDVHTLKGGARMAGADAMGD 1443 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E L + RGE++ ++ D + ++ + A + + Sbjct: 1444 LTHALEGLFELITRGELKPGPELYEPLFACHDRLAAMVEQIATGKACPPA--QDLIAQVH 1501 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH--- 181 QL + E + V + ++V + Q+ + +P Sbjct: 1502 QLHPPQQTEPSALVQKPAIVEQKVEQEAAQEAPAPAPEQRQTPTVAVPKPKPARTQTRKT 1561 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITA--VLCFVIEADQITFETVEVSPKISTPPVLK 239 L T + ++ + L L E I + + E ++ Sbjct: 1562 LRTTQETIRVSAPLLDELVNLAGETSIARGRLEQQTSDFSHTLEEMAATIERLREQLRRM 1621 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 + ++ + +++ + L L + S L L Sbjct: 1622 DIETETQILFRAEKELGPDYGEDFDPLEMDRYSSIQQLSRALSESSSDLIDLRQTLAD-R 1680 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 D T + Q R +LQE +M RM+P V R R+VR ++ +L K+ + + Sbjct: 1681 IRDTKTLLVQQSRINTELQEGLMKTRMIPFASVVPRLRRIVRQISAELDKKANFEVYNAE 1740 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 E+D++++ER+I PL H++RN+LDHG+E PEKRLAAGK G + LS + +GG++ + + Sbjct: 1741 GEMDRNVLERMIAPLEHMLRNALDHGVEAPEKRLAAGKAETGEISLSLQREGGDVVLRMR 1800 Query: 420 DDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 DDGAG++ E++ KA SQGL + +++ EV LI PGFSTA+++T VSGRGVGMDVV Sbjct: 1801 DDGAGISTEQVRNKAVSQGLVGPNDVLTEREVLQLIMTPGFSTAKEITQVSGRGVGMDVV 1860 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 I+++GG ++I S G GTT + LP T+++ + V D + +PLN + ++ Sbjct: 1861 ASEIKQLGGSLDIHSSAGHGTTFTVRLPFTVSVNRALMVTSGDNFYAIPLNTIEGIVRVS 1920 Query: 539 EADLHPLAGGE-RVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYAL 594 +L E + E G+ + L + N +A V++++ + AL Sbjct: 1921 TYELEEYYKPEAPLYEYAGQEYRLQYLGNLLNSEHQPKLQGQALPLPVILVRGAEQPMAL 1980 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI--NREQRMAN 651 VD L+G ++VVK+L + V G+S TILGDG+V +I+D+ A+ EQ+ A+ Sbjct: 1981 QVDSLVGSREIVVKSLGPQFNSVRGVSGGTILGDGNVVVILDLPAMIRSDILSEQQRAS 2039 Score = 94.5 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 72/204 (35%), Gaps = 5/204 (2%) Query: 2 SMDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 DI + + F +EA EL+ L ++ + + L + R H++KGGA Sbjct: 1228 EDDIDHEVLEIFQEEARELIDSTADALQRFSQDSGNHDLLRLLQRDLHTLKGGARLSKVG 1287 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + H +E L + + ++ ++ + +L D + ++ + P +A + Sbjct: 1288 SIGDLAHELETLFEGLVQQQLAISPMLSDLLFSCHDRLASMVETLENGDSPRSAP--DLI 1345 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 +++ + A + + S + + + L + E L G Sbjct: 1346 AEIQRYSSNAASASADHSSVALQPEPSPDAHDTNSVTTDPE--LMGIFLEEAYDLINATG 1403 Query: 181 HLTTLTDVVKGADSLSAILPGDIA 204 L+A L D+ Sbjct: 1404 SALHSWSENPENSMLAAELQRDVH 1427 Score = 90.7 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 111/291 (38%), Gaps = 13/291 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA E+LA +++++ +L D L + RA H++KG G V+ E Sbjct: 759 DDEILEVFIEEAGEVLASIDEYMPMLLRHYGDRSALGEVRRAFHTLKGSGRMVGADVIGE 818 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ G ++ + L + I+ + ++Q + + + R Sbjct: 819 LAWSVENLLNRVLDGSRSMSDAVAALISDVIAILPALVSDFEQHRSATVDTHE---AQAR 875 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE-EELGHLT 183 AL + +A + ++ + QS P S + +D+ E E L HL Sbjct: 876 AHALADGKDVLAATSAVAASEAATGDVLQSPDSGPELDDESDVDQLLLDIFESEALSHLK 935 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 T+ + A + D L + + + T ++P L+ + Sbjct: 936 TVEAYIASAANKQTTAYTD--------ELTRALHTLKGSAHTTGITPIADLVTPLERFVK 987 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINL-VGELVITQSMLAQRSS 293 A ++ S + + + + QL + + EL ++ L Q + Sbjct: 988 DARAENKRCDRDVISLLEQGVSLLNQGLLQLHSQPLAELPGSREFLEQLAQ 1038 Score = 88.0 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 57/395 (14%), Positives = 124/395 (31%), Gaps = 50/395 (12%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+E+LA + ++ LQ D L + RA H+ KG G S L E Sbjct: 606 DDEIVGIFIEEAEEVLATIHEYYPRLQRNHDDRAALAEMRRAYHTFKGSGRLVGASSLSE 665 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL++ ++ N D+ +L + + + ++ ++ + Sbjct: 666 LAWAVENLLNKLIDQTVKPNDDVFSLVTDANAYLPQLINEFRAGN--PEGDVANLVARAE 723 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE-------- 176 + + +T + A + + +S+ IL ++L Sbjct: 724 AITTTRRADTADTAAATNAPASATDRTGNPQSELIDDEILEVFIEEAGEVLASIDEYMPM 783 Query: 177 --------EELGHLTTLTDVVKGADSL--------------------------SAILPGD 202 LG + +KG+ + + Sbjct: 784 LLRHYGDRSALGEVRRAFHTLKGSGRMVGADVIGELAWSVENLLNRVLDGSRSMSDAVAA 843 Query: 203 IAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST 262 + D I + V + +Q TV+ + L + + + Sbjct: 844 LISDVIAILPALVSDFEQHRSATVDTHEAQARAHALADGKDVLAATSAVAASEAATGDVL 903 Query: 263 SIRVAVEKVDQLINLVGELV-----ITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 + ++D ++ L+ S L + + + +L R L Sbjct: 904 QSPDSGPELDDESDVDQLLLDIFESEALSHLKTVEAYIASAANKQTTAYTDELTRALHTL 963 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVE 352 + S + + P+ + + R V+D A K+ + Sbjct: 964 KGSAHTTGITPIADLVTPLERFVKD-ARAENKRCD 997 Score = 75.3 bits (184), Expect = 7e-12, Method: Composition-based stats. Identities = 51/304 (16%), Positives = 100/304 (32%), Gaps = 13/304 (4%) Query: 4 DISDFY-QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ F EA L +E ++ + + RA H++KG A T G + + Sbjct: 917 DVDQLLLDIFESEALSHLKTVEAYIAS-AANKQTTAYTDELTRALHTLKGSAHTTGITPI 975 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + +E + +AR + + D+I+L + ++ + L + + Sbjct: 976 ADLVTPLERFVKDARAENKRCDRDVISLLEQGVSLLNQGLLQLHSQPLAELPGSREFLEQ 1035 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L QLA T T+LS E S ++ + L Sbjct: 1036 LAQLARATLTGTSYDDTQLSSANSRSALLELFLSDDINIVLNASRILDSWIANPANGQAL 1095 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 L + +I D A L ++ + PK L LA Sbjct: 1096 EQLRHEL-----TLLTAATEITGLDDIATLSAALQDSYSVLADSDREPKPELQACLHLAH 1150 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 EQ + + + +R QL++L +++ + + LA+ + + +H Sbjct: 1151 EQLINMMDQAAAGLTIDSADPLR------QQLMDLTDDVLASDAFLAEFQEDENLNHHQH 1204 Query: 303 LITS 306 + Sbjct: 1205 IDNE 1208 Score = 42.2 bits (98), Expect = 0.059, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 68/265 (25%), Gaps = 5/265 (1%) Query: 13 FDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENL 72 E+ L + ++ D ++ + HSI GG E ME Sbjct: 444 LKESRNTLEQAKSAVVNFIASQWDTREIEHLPALLHSICGGLRLIPLERASELLEAMERY 503 Query: 73 L-DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 + D G N ++ + ++ L+ + D + + Sbjct: 504 INDVLLSGREVPNWQELDTLADAVTSIEYYLERLSEG----IRDNDSVLRVAEISLESLG 559 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 T +E + + L G + + + + Sbjct: 560 FPAGKPSTWRPRADINEADIPLVDTPLLDAVSAPTLDTGVAPDELLDDEIVGIFIEEAEE 619 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 + + + + TF+ S+ L A E ++ Sbjct: 620 VLATIHEYYPRLQRNHDDRAALAEMRRAYHTFKGSGRLVGASSLSELAWAVENLLNKLID 679 Query: 252 REKTTRSNESTSIRVAVEKVDQLIN 276 + + + + A + QLIN Sbjct: 680 QTVKPNDDVFSLVTDANAYLPQLIN 704 >UniRef50_B8JCH1 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=B8JCH1_ANAD2 Length = 661 Score = 540 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 233/667 (34%), Positives = 354/667 (53%), Gaps = 31/667 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + ++ +EA E +A++E LL L+ DAE ++ FRA H+IKG FGF + Sbjct: 4 LEQLAASYREEAGERVAELEATLLELEQAPDDAELVSRAFRALHTIKGSGAMFGFDEVAA 63 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E + + R G + + ++I L L KD+++ LD D D + A R Sbjct: 64 FTHELETVFEHVRGGRLAVTRELIGLALAGKDLVRGMLD---GEGGADGRERDRLVAAYR 120 Query: 125 QLALEAKGETPSAVTRLSVVA-------------------KSEPQDEQSRSQSPRRIILS 165 LA +A+ P+ A EP + + + +L Sbjct: 121 ALAPDAEAGAPTPAGGEQADAGCGAAGDAAAALGPRTWRIAFEPNPDLFENGTNPLGLLD 180 Query: 166 RLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITF 223 L ++ + L D+ L D ED I V FV + + Sbjct: 181 ELSTLGPCVVVARTDGIPRLEDLAPERCHLAWEVTLTTDRGEDAIRDVFAFVEDRCTLRV 240 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 + + + P LAA R ++S+RVA K+D L++LVGELV Sbjct: 241 QALPSAEAAPAAPSPALAAGAGEIARSTGGPARPPEAASSVRVAAAKLDHLVDLVGELVT 300 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 QS LA+ +++ + +L L+R DL+++ + +RM+P+ F R R+ RDL Sbjct: 301 AQSRLARLAAQAED---AELGAVSEGLERLTADLRDTALDLRMVPIGTAFGRLRRVARDL 357 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A LGK+++L G+ TELDK++IER+ DPL H++RN+ DHGIE PE R AAGK G + Sbjct: 358 AADLGKEIDLVTEGAETELDKTVIERLADPLVHVIRNACDHGIETPEARRAAGKPPRGTI 417 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTA 462 LSA GG++ +EV DDGAG++ + A+A ++GL +++ ++ L+F PGFSTA Sbjct: 418 SLSARQAGGSVVVEVRDDGAGIDPAAVRARAEARGLLQPGARLAEADLLNLVFQPGFSTA 477 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 VT VSGRGVGMDVVKR+++ + G V ++S G GT +RI LPLTLAI++G+ V V Sbjct: 478 RTVTSVSGRGVGMDVVKRSVEALRGTVALESAPGAGTALRIELPLTLAIIEGLLVEVGGG 537 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 ++LPL AV E + A++ A G + VRGE +P + L +VF V GA+ + Q + Sbjct: 538 SYVLPLAAVEECVGLTAAEVEA-ARGAHLAPVRGELVPYLRLREVFEVRGARPDHEQ--I 594 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 I+++ R L VDQ+ GQ Q V+K++ +R V G+S ATILGDGSVA I+DV+AL Sbjct: 595 AIVRTEAGRCGLAVDQVAGQLQAVIKSMGQMFRSVKGLSGATILGDGSVAPILDVAALLK 654 Query: 643 INREQRM 649 + + Sbjct: 655 EHAARAA 661 >UniRef50_Q30RX9 CheA signal transduction histidine kinases n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30RX9_SULDN Length = 691 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 212/677 (31%), Positives = 349/677 (51%), Gaps = 44/677 (6%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 Q F +E E+L ++ LL L+ D +N IFR H++KG A +FGF L E Sbjct: 5 DRVMQIFLNECKEILEEIAPKLLNLEDTPNDKNLINDIFRGIHTLKGNANSFGFVKLGEF 64 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H E+LL R+ E L++ ++LF+ + DI+ + + + ++ I + +++ Sbjct: 65 VHHFEDLLSIYRKDESVLDSSEVDLFIRSFDIVGSVFEYEEDGVDGYPTNYYEILEEIKK 124 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDE------------------------QSRSQSPRR 161 + S +S + + E + + + Sbjct: 125 ALNIKENSKESFEEIVSASSFAHVAQESVIVKKMVEHTQYNLKDIGDKKIYEIKLELDSD 184 Query: 162 IILSRLKAGEVDLLEEELGHLT----TLTDVVKGADS----------LSAILPGDIAEDD 207 I L L E LG L + + + + L L D E D Sbjct: 185 IYLRGYNHQIFFRLLESLGTLLYSNYIIDENIPTLEEFNTEHSYVKSLYIYLLSDSDEMD 244 Query: 208 ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV---EREKTTRSNESTSI 264 I V F+ + +++ V++ + E + K +S +SI Sbjct: 245 ILDVFEFIAQEHEVSLSVVDLKELETLQEKESKEEESQSQETLYVQNGSKEHKSVAKSSI 304 Query: 265 RVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 RV K+D+L + +GELVI QS ++Q + ++ +N +L + L ++ R +Q VMS+ Sbjct: 305 RVESAKLDELFDSIGELVIAQSYISQ-NEKIRSINDNELNQYLEMLSKSTRIIQSKVMSL 363 Query: 325 RMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDH 384 RM+P+ F + R+VRD++ K K++EL L G TE+DK++++++ +PL HL+RNS+DH Sbjct: 364 RMIPIRDTFLKMKRVVRDVSVKTSKEIELILSGEDTEIDKTMVDKLSEPLIHLLRNSVDH 423 Query: 385 GIE-LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS- 442 GIE R+A GK GN+ LSA H+G + IE+ DDG G++ ++IL KA +G Sbjct: 424 GIEESAHDRVALGKEECGNIYLSAAHKGSSFVIEIRDDGRGIDTQKILQKAIEKGFAKEG 483 Query: 443 ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIR 502 + + DE+ +F GFSTA +TD+SGRGVG+D V+++I+++ G V ++S+ G GT R Sbjct: 484 ASYTQDEIINFLFCAGFSTANSITDISGRGVGLDAVRQSIEELRGKVTVESELGVGTIFR 543 Query: 503 ILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIV 562 I+LPLTLAI+DG+++RV +E+ I+P +V+ES P D+H + G + RGE LPIV Sbjct: 544 IILPLTLAIIDGLTIRVDNEMLIVPTLSVVESFSPIIKDIHYVKGEGEFINYRGEILPIV 603 Query: 563 ELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISA 622 L ++ + +KTE + + RY + VD+L+G+ QVV+K+L V IS Sbjct: 604 RLNRLLGLNKSKTEFENSTFICIDHERGRYIIQVDELLGRQQVVIKSLGVLSNNVKEISG 663 Query: 623 ATILGDGSVALIVDVSA 639 A ILG G +ALI++ Sbjct: 664 AAILGTGQIALILNTEG 680 >UniRef50_C6WJP0 CheA signal transduction histidine kinase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WJP0_ACTMD Length = 760 Score = 539 bits (1390), Expect = e-152, Method: Composition-based stats. Identities = 211/657 (32%), Positives = 329/657 (50%), Gaps = 63/657 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D D Q F E+ E L +++ L+ L+ E E+L +IFR H+IKG +G F+ Sbjct: 1 MDDFDDVVQEFLVESYENLDQLDRDLVALEKEPKSHERLASIFRTIHTIKGTSGFLAFTK 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L++ TH+ E+LL R G +L+ ++ L D ++E Sbjct: 61 LEQVTHVGESLLVRLRDGTQELDKPSADVLLRMVDTVREL------------------LA 102 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + Q E + + ++ P + + + + +EE Sbjct: 103 QIEQNGAEGDLDVQDVIDAVTACITGGPAAAPAAPAAAPEVAAVVEAPATPEASDEEPEG 162 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 D E E + + Sbjct: 163 ------------------------------------EDAEHDEHDEPEHREEPSAPAAVN 186 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A + + RS +SIRV V +D L+ LVGELV+T++ Q D Sbjct: 187 APAPLVEAADEGGSKRSVADSSIRVDVNLLDALMRLVGELVLTRN---QMIRAADAAGEP 243 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L + +L +LQESVM RM P++ ++S+ PR+VRDL+ G++VEL + G+ TE Sbjct: 244 NLSRAAQRLNLITSELQESVMKTRMQPIKQLWSKLPRVVRDLSSACGREVELVMEGAETE 303 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+SL+E + DPLTHLVRN++DHGIE PE R+A GK+ G L L A H+ G + +EV DD Sbjct: 304 LDRSLLEAVKDPLTHLVRNAVDHGIEPPETRVANGKSREGTLTLRAYHEHGQVIVEVCDD 363 Query: 422 GAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 GAG++ +++ A A +G+ E+M +DE+ L+F PGFSTA +V++VSGRGVGMDVV Sbjct: 364 GAGIHPDKVGATAVKRGVITQSQLESMDNDEILKLVFRPGFSTAAKVSNVSGRGVGMDVV 423 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 + NI+ +GG V+++S G GTT R+ +PLTLAI+ + V D+ + +P AV E + Sbjct: 424 RANIEAIGGAVDLKSVPGKGTTWRLNIPLTLAIVQALIVDSGDQRYAIPQMAVHELVYVD 483 Query: 539 --EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA-KTEATQGIVVILQSGGRRYALL 595 + G V +RG+ LP+V L +V K ++ V +L++ GR++ L+ Sbjct: 484 GQSGSVVEYVSGAPVYRLRGKLLPLVRLSEVLGGPSTGKGSDSEIYVAVLKAEGRQFGLV 543 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANT 652 VD+++ +VVVK L S ++ V S ATILG+G V+LI+DV +L + T Sbjct: 544 VDRVLNTEEVVVKPLASRFKDVGCYSGATILGEGQVSLILDVQSLARRAHLSSLERT 600 Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 2/89 (2%) Query: 513 DGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG 572 + +VAD +PL+ V ++ + G V++ R + LPI L ++ A Sbjct: 617 RLLITKVADRRIAIPLSMVTRLEDFPAKNVERV-GTREVVQYRDQILPITRLSQLLG-AW 674 Query: 573 AKTEATQGIVVILQSGGRRYALLVDQLIG 601 ++T+ ++ GG AL VD ++ Sbjct: 675 SETDREVISAIVYSEGGHSVALAVDSILD 703 >UniRef50_A4XSL6 CheA signal transduction histidine kinase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XSL6_PSEMY Length = 739 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 219/725 (30%), Positives = 348/725 (48%), Gaps = 86/725 (11%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 S + F DEA +L+ E++LL L D + +N +FRA H++KG AG F + L Sbjct: 8 SQLLRGFIDEAGDLIKQAEEYLLQLDQTPEDEDAVNGLFRAMHTLKGSAGLFSLTPLVSF 67 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQALR 124 TH +E+LL R + ++ +++L L D + + S E Sbjct: 68 THHLESLLMSVRDSQRKMEPALVSLMLRCLDEIATMVALIDVDSGELPVDETHQNELLAA 127 Query: 125 QLALEAKGETPS------------------------AVTRLSVVAKSEPQDEQSRSQSPR 160 A A ++ D P Sbjct: 128 LAAYGAPASVEPAAAPAAASPRPCAQRGAFERCAGCDADGAWHISLRFEADLLRNGFDPA 187 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEA 218 + + G++ LE L +L ++ + L L + ++ +I V F+ + Sbjct: 188 SFVRYLTRLGDILRLEVIDEALPSLAEMDPESCYIGLEIDLCSEASKAEIEEVFEFIHDF 247 Query: 219 DQITFETVEVSPK----------------------------------------------- 231 + + + + Sbjct: 248 CTLRILPPQSAQEDYLRLIQELPETDQRIGSILIASGLLTEHELNQGLALQAQAEPEKAP 307 Query: 232 ----ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 + ++ A + + + RS EST IRVA K+D+LINLVGELVI+ + Sbjct: 308 LGSVLVEEGMVAPQVVNAALAKQQSVREKRSQESTQIRVAAHKLDELINLVGELVISAAG 367 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 R+ + S + ++ ++E+ + +RM+ + F+R+ R+VRD++ +L Sbjct: 368 AQLRAQAHGDAGC---VESTQTVNQHVEQIREAALKLRMIEIGDTFNRFHRVVRDVSQQL 424 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GK + L + G+ TELDKS+I+++ DPLTHLVRN++DHGIE E+RLAAGK + G L L+A Sbjct: 425 GKDIRLQIRGADTELDKSVIDKLADPLTHLVRNAIDHGIESAEQRLAAGKPAEGQLQLNA 484 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVT 466 H+ G I IEV DDG GLN ERI KA +GL ++ N+++ ++ L+FA GFSTA+ V+ Sbjct: 485 YHESGMIVIEVADDGRGLNTERIRQKAIDRGLIDAQANLAEPDIHALVFAAGFSTADSVS 544 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 D+SGRGVGMDVV+ I + G +EI S G G T RI LPLTLAI+DG + + DE F++ Sbjct: 545 DLSGRGVGMDVVRSVIDGLRGSIEIDSVLGAGCTFRIRLPLTLAIIDGFLISLGDEYFVV 604 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL+ V E L+ L G L +RG+ LP + L F++ ++ + + +V++ Sbjct: 605 PLDMVTECLEMDAEQLGDSTYG--YLTLRGKPLPCISLAAHFDLPASR--SKRRNIVVVN 660 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 G ++ L+VD L G+ Q V+K L ++ + GI +TILG G VALI+D+ +L + Sbjct: 661 LGRQQAGLVVDHLHGELQTVIKPLGLLFQHLQGIGGSTILGSGQVALILDIPSLFRHLQN 720 Query: 647 QRMAN 651 AN Sbjct: 721 HVEAN 725 >UniRef50_Q0AWZ2 CheA signal transduction histidine kinase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AWZ2_SYNWW Length = 927 Score = 539 bits (1390), Expect = e-151, Method: Composition-based stats. Identities = 205/745 (27%), Positives = 355/745 (47%), Gaps = 102/745 (13%) Query: 1 MSMDI----SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGT 56 M ++I Q FF+E E L +E++ + L+ + D E+LNAI R HSIKG AG Sbjct: 177 MKIEISSFREQLLQDFFEETGEHLDTIEKNCVELEKQPEDLERLNAILRGFHSIKGAAGV 236 Query: 57 FG-----------FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDI-------- 97 F ++ +H E+LL R + L++ +I+L LET D Sbjct: 237 INSMQEEETPDDPFEKIKSLSHAAESLLQTFRNQQAPLSSPVIDLILETVDRTAALSQMV 296 Query: 98 ---------MQEQLDAYKQSQEPDAASFDYIC----------------------QALRQL 126 +++ L E D + I +++ + Sbjct: 297 QGIESEDLPIEDLLSRINALSEADKEANQSIISGPVESIPRQLKAFVNITNQALESMESI 356 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A+ +TP + R+ ++ S I + + L + G Sbjct: 357 ISSAREDTPISRKRVKQYLRALNSIASSSRYLEYEDIFELIASHTQYLNDLIPGEDLVNP 416 Query: 187 DVVKGADS------------------LSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 ++K S L + +P + E I +L + Q Sbjct: 417 GLIKELKSHHGQIKKLLGDKVADIKDLLSNVPLEYGEKRIGEILVAQQKLSQEELNEALA 476 Query: 229 SPK----------------ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVD 272 K + + + A + E + + SIRV+ +K++ Sbjct: 477 QQKKIGEILVDSGKVEPEDVERALLEQQLAREKSKEVPEPARASSDIGGQSIRVSQDKMN 536 Query: 273 QLINLVGELVITQSMLAQRSSELD-----PVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 +L+N++GEL+I+++ + +S++ P ++ ++ R + +LQ+++MS RM+ Sbjct: 537 RLMNMIGELLISKNRVFHLASKIGLEYQLPGLAREVKDIAAEVARISDELQDAIMSARMV 596 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ +F RYPR +RD++ K GK V+L ++G TELDK++IE I DPL H++RN++DHGIE Sbjct: 597 PLRILFQRYPRTIRDISRKAGKSVDLVVLGEETELDKTVIEAINDPLVHMLRNAVDHGIE 656 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--- 444 P+KR A GK G + L A +QG ++ IE++DDG G+N E I KA +GL E Sbjct: 657 APDKREAQGKPRQGKIYLKARYQGNSVIIEISDDGKGMNPEEIKLKALGKGLIRPEQIES 716 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 MS++E LIF PGFST E+V+++SGRGVGMDVVK NI+++GG V + S+ GT + Sbjct: 717 MSNEEAYQLIFLPGFSTREEVSELSGRGVGMDVVKNNIEQVGGTVTMSSQLNQGTNFLLR 776 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 +PL+++I+ G+ V++ + FILPL+++ E+++ + ++ ++R E + ++ L Sbjct: 777 IPLSMSIIRGLMVKMGSQSFILPLDSIEETVKLPANKIRSYK-KIKIADIRDEIVHLIYL 835 Query: 565 WKVFNVAGAKTEA-----TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPG 619 + ++ + +V++ G R+ L+VD + + VVK L + Sbjct: 836 KDLLSLKEDFAAPVITFDMRIPIVVINYDGNRFGLVVDSFQHEQEFVVKTLAEELAALKL 895 Query: 620 ISAATILGDGSVALIVDVSALQAIN 644 + ATI+GDGSV LI++ L + Sbjct: 896 YTGATIMGDGSVVLILNPGQLYQLF 920 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 60/342 (17%), Positives = 138/342 (40%), Gaps = 11/342 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D + Q +E+ E L +E+ +L L+ E D+EQL+A+FRA HS+KG A ++ Sbjct: 8 DDLEILQGIVEESSEHLNGIEEGILKLEAE-FDSEQLDAVFRAMHSVKGVAAFLDLIPIK 66 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 +T H +E+ + + ++G + ++I ++ L+ DI+Q Q+ + + A+ L Sbjct: 67 DTAHSLESFMTDMKKGLYPVTSEITDILLKGVDILQLQIRQLGEHVKKLEANPPREKFEL 126 Query: 124 --RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 ++ + + + ++ + Q+E S+ L A + + Sbjct: 127 LIKEHGFQEFIQEAEVLRNNTLENRESAQEESCDSEIQVECELPESVANVMKIEISSFRE 186 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + + L I + + L + + + I++ + Sbjct: 187 QLLQDFFEETGEHLDTIEKNCVELEKQPEDLERLNAILRGFHSIKGAAGVINSMQEEETP 246 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ-LINLVGELVITQSMLAQRSS--ELDPV 298 + P +++ + + R + +I+L+ E V + L+Q E + + Sbjct: 247 DD--PFEKIKSLSHAAESLLQTFRNQQAPLSSPVIDLILETVDRTAALSQMVQGIESEDL 304 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 DL++ + L ++ +S++S P+E + + V Sbjct: 305 PIEDLLSRINALSEADKEANQSIISG---PVESIPRQLKAFV 343 >UniRef50_Q3IDZ4 Chemotaxis protein cheA n=10 Tax=Gammaproteobacteria RepID=Q3IDZ4_PSEHT Length = 725 Score = 539 bits (1389), Expect = e-151, Method: Composition-based stats. Identities = 218/730 (29%), Positives = 333/730 (45%), Gaps = 88/730 (12%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 MS ++ + Q F EA E+L + + L+ L+ D E LNAIFR H++KGGAG Sbjct: 1 MSFEVDEDILQDFLVEAGEILELLSEQLVELENNPEDTELLNAIFRGFHTVKGGAGFLAM 60 Query: 60 SVLQETTHLMENLLDEAR-------------------------------RGEMQLNTDII 88 S L + H EN+ D R + ++ Sbjct: 61 SELVDACHGAENVFDLLRQKVRTVNSELMDVILQALDTINEMFATIKNREQPEPADPQLL 120 Query: 89 NLFLE----------TKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAV 138 + + D + + + D +FD + A + Sbjct: 121 EILHKLGLPPTEEELGGDTIAPVITQDAN-LDDDPFAFDELFDAPSAATNATANDAHIDE 179 Query: 139 TRLSVVAKSEPQ-------DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 + S S + + E D L +EL + + V K Sbjct: 180 ISEDEFENLLDELHGKGKGPAIKESLSNSSDLSGDITDDEFDSLLDELHGVGSFGAVNKT 239 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR-- 249 +A P DD + F D++ + K S + AP Sbjct: 240 PKPQAAQSPAASTNDDEISDDEFEALLDELHGKGAAPKSKESAATPAPVNKVTAPKAAVV 299 Query: 250 ----------------------------VEREKTTRSNESTSIRVAVEKVDQLINLVGEL 281 +K + T++RV +++DQ++N+VGEL Sbjct: 300 KSSPVAVDKVKQPQAAVVAASANTNTAAPVAKKAPPAQAETTVRVDTKRLDQIMNMVGEL 359 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 V+ ++ L ++ + + ++ L DLQ +VM RM P++ VF R+PR+VR Sbjct: 360 VLVRNRLVSLATSSES---ESMSKAISNLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVR 416 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 DLA L K + L LVG T+LDK+L+E + DPL HLVRNS+DHGIE+P+ R AAGK G Sbjct: 417 DLARTLNKDINLLLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPDDREAAGKPRTG 476 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPG 458 + LSA QG +I + + DDGAG++ E++ A +G+ E +S+ E LIFAPG Sbjct: 477 TVTLSASQQGDHILLTIKDDGAGMDAEKLKQIAIKKGVLDQEQASRLSNTEAYNLIFAPG 536 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FST E ++D+SGRGVGMDVVK I ++ G V I+S+ G GT + I +PLTLAIL + V Sbjct: 537 FSTKEAISDISGRGVGMDVVKTKITQLNGSVSIESELGVGTILEIKVPLTLAILPTLMVV 596 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA- 577 V+++ F LPL V E + G+ + VR + +P+ L +T Sbjct: 597 VSEQTFALPLAGVSEIFNLDLTK-TNVVDGQLTIIVRKKAVPLFYLEHWLVKGADRTSRK 655 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 QG VVI+Q G ++ +VD LIGQ +VV+K L++ + PG++ ATI DG +ALI+DV Sbjct: 656 AQGHVVIVQIGTQQVGFVVDSLIGQEEVVIKPLDALLQGTPGMAGATITSDGGIALILDV 715 Query: 638 SALQAINREQ 647 ++ + Sbjct: 716 PSMLKHYAGK 725 >UniRef50_Q5FQQ3 Chemotaxis protein CheA n=1 Tax=Gluconobacter oxydans RepID=Q5FQQ3_GLUOX Length = 682 Score = 539 bits (1388), Expect = e-151, Method: Composition-based stats. Identities = 212/677 (31%), Positives = 343/677 (50%), Gaps = 31/677 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + D+ FFDE DE L +E+ L L+ E + E++N IFR HSIKGGA FG Sbjct: 6 FTDDMDAIRLIFFDECDEQLTLLEEELTALEDEPENGEKINTIFRCVHSIKGGAAAFGME 65 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L +HL E++LD R GE+ +N + I +FL+ KD + + + +K + + I Sbjct: 66 DLVRFSHLFESVLDRFRSGELSVNAESIRVFLKCKDALSDIVSDFKNGGSTYEVAPE-IT 124 Query: 121 QALRQLALEAKGETPSAVTR-----------LSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 L E A V + + EQ S + Sbjct: 125 ADLEHYLGSDASEPEPASEEVRTEDIFGMSFAPVKIEIDAPSEQQFSIVLTVSPEFYERG 184 Query: 170 GEVDLLEEELGHLT--------------TLTDVVKGADSLSAILPGDIAEDDITAVLCFV 215 ++ + L L + + +L + + + I + + Sbjct: 185 DDIRNILMALEGLGQIKVQVDSDAVPLLADISPGQSYLTWQILLTTEKSRESIDEIFDWC 244 Query: 216 IEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLI 275 + Q +V + + P +A E+ K T +S ++RV ++++D+L+ Sbjct: 245 GDDLQAVITSVPEEAEQTKIPSAPVAEEKTDPPVR---KGTERKDSATVRVDIQRIDKLV 301 Query: 276 NLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 +L+GELVI Q + + L + + ++ +LQE+V+++R P++ VF + Sbjct: 302 DLIGELVINQGAIQSQMRRNKVPGDSFLGSVVTAQEQLIHELQENVITMRAYPIKTVFQK 361 Query: 336 YPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAA 395 R+VR+ A KQV L L G TE+D+S++E++ DPLTH+VRN++DHGIE PE R A Sbjct: 362 LGRVVRETARLTEKQVRLVLEGEDTEVDRSILEKLSDPLTHMVRNAIDHGIESPEVRAQA 421 Query: 396 GKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLI 454 GK+ G L L A + G I +E+ DDGAGL+ +RI KA + + + + +E+ LI Sbjct: 422 GKDPEGLLRLRAFQRSGRIIVEIQDDGAGLDPDRIYEKAVEKKIIEKGQRLDREEIYSLI 481 Query: 455 FAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDG 514 F PGFST +VTDVSGRGVGMDVVK+++Q++ G + I S +G GT I LP TL++++G Sbjct: 482 FEPGFSTVAEVTDVSGRGVGMDVVKQSLQQINGRIFISSSKGKGTIFSISLPFTLSVIEG 541 Query: 515 MSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAK 574 + + + F++P+N V +++ + + G+ R YL ++ + +V K Sbjct: 542 IIFKSEGQDFVVPINNVSDTIIFDNSKAFHIGEGKYGYPYRDGYLSVIYASDLLDVPSDK 601 Query: 575 TEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 + VI + A +VD++I Q + VVKNLE NYRK+ S ATILGDG+VA I Sbjct: 602 KN-QKICFVIENENEEKMAFIVDKIIDQSRFVVKNLEDNYRKIACFSTATILGDGNVAFI 660 Query: 635 VDVSALQAINREQRMAN 651 +DV L ++R ++ Sbjct: 661 LDVEFLFGELLKKRESS 677 >UniRef50_C6WW65 CheA signal transduction histidine kinase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WW65_METML Length = 769 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 273/530 (51%), Positives = 358/530 (67%), Gaps = 5/530 (0%) Query: 130 AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVV 189 + ++ + + Q E+ + ++ + + +V + EE L Sbjct: 226 DPDDLVISLKTNTATPSAATQIEEIKPIVAEAVVSNVESSTKVLIHEEVGYGLFEDEGQE 285 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV-----LKLAAEQ 244 K + P D + + L A ++ + + + E+ Sbjct: 286 KQEEGYGFFAPFQPHPDAVKSELIGDDTALTLSNSGMTKLAADAVKTEIVATKVPAQDER 345 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 GR E +K S E++SIRV VEKVDQLINLVGELVITQ+M+ QR S LDPV + LI Sbjct: 346 KNLGRRESDKAPASAEASSIRVGVEKVDQLINLVGELVITQAMIEQRISMLDPVQNEALI 405 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 S+GQL RN RDLQESVMSIRMMPM++VFSR+PR+VRDLA KL K+V+ VG++TELDK Sbjct: 406 NSVGQLTRNTRDLQESVMSIRMMPMDFVFSRFPRMVRDLAAKLNKKVDFVTVGATTELDK 465 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 LIERI+DPLTHLVRNS+DHGIE+PE R GK+ G L LSA H+GG+I IEVTDDGAG Sbjct: 466 GLIERIVDPLTHLVRNSVDHGIEIPENRRKTGKSETGTLTLSAAHKGGSIVIEVTDDGAG 525 Query: 425 LNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 LNR++ILAKA S GL VSE+M+D EV LIFAPGFSTAE VTDVSGRGVGMDVVKRNI Sbjct: 526 LNRDKILAKAHSNGLAVSESMTDGEVFSLIFAPGFSTAEVVTDVSGRGVGMDVVKRNITS 585 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 MGG V+I+S G GTTI I LPLTLAILDGMSV + + ++++PLN ++E+LQPR D+ Sbjct: 586 MGGTVDIRSALGFGTTISISLPLTLAILDGMSVSLGESIYVIPLNLIVETLQPRAEDIKT 645 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 + G R++ VRGEYLPI+ L +FN A T+ T+G++V+L+S G++ AL VD+L+GQ Q Sbjct: 646 VTGEGRMVHVRGEYLPIIALHSLFNHATDITDPTEGVLVLLESDGKKSALFVDRLVGQQQ 705 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 VV+K+LE+N++KV G+S ATI+GDGSVALI+DV+AL + + AA Sbjct: 706 VVIKSLETNFKKVLGVSGATIMGDGSVALILDVAALIQMGQNTNYITGAA 755 Score = 114 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 80/257 (31%), Positives = 130/257 (50%), Gaps = 9/257 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FY+ FFDEA+ELLA+ E+ LL + + PD E+LNAIFRAAHSIKGGA TFGF Sbjct: 1 MTIDMSQFYEVFFDEAEELLAEAERLLLGINIDDPDNEELNAIFRAAHSIKGGAATFGFM 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L ++ ++ FL KD+++ +LD ++ + + D + Sbjct: 61 DMTEITHVLENLLDKIRKHEMALTSEHVDAFLAAKDVLKMELDGHRLATDVDQDQVADVK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEP---------QDEQSRSQSPRRIILSRLKAGE 171 L+QL+ P+ + V P S I++ + + Sbjct: 121 MMLKQLSEADAASAPAPAPTPAPVVAEAPPVFQPVEVASALPPDGMSCFNIVMPDITEKD 180 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 + L+EELG L + + L D +E DI ++ F+++ D + + Sbjct: 181 AENLKEELGLLGDVAVSKQADGHYVITLTTDSSEADIISICSFIVDPDDLVISLKTNTAT 240 Query: 232 ISTPPVLKLAAEQAPTG 248 S ++ Sbjct: 241 PSAATQIEEIKPIVAEA 257 >UniRef50_C5SEH2 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5SEH2_CHRVI Length = 735 Score = 538 bits (1387), Expect = e-151, Method: Composition-based stats. Identities = 222/727 (30%), Positives = 353/727 (48%), Gaps = 81/727 (11%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 M++ Q+F E ELL ME LL L+ + D E LNA+FRA H+IKG G FG+ + Sbjct: 1 MNLDSARQSFLAEVAELLQSMEDALLALEDDPDDPESLNAVFRAMHTIKGTGGVFGYEAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH +E L+D R G++ L +I LE +D +DA + PD + +A Sbjct: 61 VEFTHTVETLMDRVRSGQVPLTRPLIATLLECRDHTARLVDAIVAASVPDGPLDPDLARA 120 Query: 123 LRQLA------------------LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL 164 L E + V+ L ++ +D P + Sbjct: 121 GESLLARLGRSGDADQDAAAVARSEPDAKYLPVVSDLWMITLRFKRDTFRDGIDPLSFLR 180 Query: 165 SRLKAGEVDLLEEEL---GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 GE+ + L D G++ + + V F + +I Sbjct: 181 YLGSLGELVHVTTRLDPEARHADDFDPESCYLQFGIGFRGEVDKPTLAGVFEFADQDCEI 240 Query: 222 TFETVEVSPKISTPPVLKLAAEQA--------PTGRVEREKTTRSNESTSI--RVAVEKV 271 + + + + EQ G + R + R+ E+ ++ R + E Sbjct: 241 RILEPDTAHSKYLELLAAVPDEQVGWIGDLLLRIGALTRSELDRALETQAVEARGSTEGD 300 Query: 272 DQLI-NLVGELVITQ-----SMLAQRSSELDPVNHG------------------------ 301 + VGE+++ Q +++ Q + + Sbjct: 301 TKAHKRRVGEILVEQGSIKPAVVEQAARTQEAARARRQEETRFIRVDAQRLGHLIDLIGE 360 Query: 302 ------------------DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 D+ + + +++++ + +RM+P+ SR+ R+VRD Sbjct: 361 LVTSSAAIRVLVKRAGIEDMNEVVDGVDYLVAEIRDNALQLRMVPIGESLSRFKRVVRDA 420 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 + +LGK++EL + G TELDK+++E++IDPLTHL+RN++DHGIE PE R A GK + G + Sbjct: 421 SRELGKEIELVITGGETELDKTVVEKMIDPLTHLIRNAVDHGIETPEVRRARGKPAQGTV 480 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTA 462 ++A H G+I +E+ DDGAGLN ERI AKA + GL E+ ++ +E LIFAPG ST Sbjct: 481 RINAYHDSGHIVVEIADDGAGLNVERIRAKAEAAGLVKPEDVLTREETLRLIFAPGLSTK 540 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 EQ T++SGRGVGMDVV+RNI+ + G VE+ S+ G GT + I+LPLTLAI+DG V + Sbjct: 541 EQATNLSGRGVGMDVVRRNIEALRGTVELDSRLGEGTQVTIVLPLTLAIIDGFLVGAGPD 600 Query: 523 VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV 582 +++PL V E ++ GE + +RGE LP + L +F AG + + + Sbjct: 601 QYVIPLAQVAECVEMDAER-SARQQGEHYINLRGEVLPFIRLTDLFENAGIQQGPRRESL 659 Query: 583 VILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 V+++ G + L+VD L+G+ Q V+K L + ++ G++ ATILG G +ALI+DV+ L A Sbjct: 660 VVVRFGHHKMGLVVDTLLGELQTVIKPLGKVFERLRGVAGATILGTGDIALILDVAELAA 719 Query: 643 INREQRM 649 I QR Sbjct: 720 IAEGQRA 726 >UniRef50_Q1IRH4 CheA signal transduction histidine kinases n=2 Tax=Bacteria RepID=Q1IRH4_ACIBL Length = 766 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 201/651 (30%), Positives = 326/651 (50%), Gaps = 71/651 (10%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 ++ + + F E++E L +++ L+ L+ + + + L +IFRA H++KG +G GF Sbjct: 15 MSEMDEIVKEFLVESNEGLDQLDRDLVALEKDPEEKDLLASIFRAIHTVKGTSGVLGFPK 74 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 ++ H+ E+LL R G+M+L+ + Sbjct: 75 IESVAHVGESLLSRLRDGKMRLDP------------------QITSGLLAMGDVLRELLG 116 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + L +E VT Sbjct: 117 NIDALGVEGDRNVEPVVT-----------------------------------------R 135 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 L+ L + + + A E + + E + V+ P A Sbjct: 136 LSALLERTDSSKAADAATADTAPEARKKTTKRVAKKRSKAAVEPLSVAEASPAPASTLAA 195 Query: 242 AEQAPTGRVEREKTTRSNESTS--IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 E A +G R ++ IRV V +D+++NLVGELV+ ++ + Q + Sbjct: 196 DEAAQSGANLETSEARGPAVSANNIRVDVGLLDKMMNLVGELVLARNQILQYTGSQQDSG 255 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 +++ +L +LQESVM RM P+ ++++ PRLVRDLA GKQV + + G+ Sbjct: 256 ---FVSAAQRLNLITTELQESVMKTRMQPIGNIWNKLPRLVRDLALSCGKQVRVEMDGAE 312 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 TELDK++IE I DPLTH+VRN++DHG+E+PE+R + GK + G L+L A H+GG + IE++ Sbjct: 313 TELDKTIIEAIKDPLTHIVRNAVDHGLEMPEERRSTGKEAEGRLLLRAYHEGGQVNIEIS 372 Query: 420 DDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 DDG G++ E + KA +GL +E MS+ E+ ++F PGFSTA+QVT++SGRGVGMD Sbjct: 373 DDGKGVDLEAVREKARQRGLVSAEQAARMSERELLNVLFLPGFSTAKQVTNISGRGVGMD 432 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VVK NI+K+GG V++QS +G GT ++I +PLTLAI+ + E F +P +++E ++ Sbjct: 433 VVKTNIEKIGGTVDLQSVEGKGTALKIKIPLTLAIIPALIATSGGERFAIPQVSLLELVR 492 Query: 537 PREADL---HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 + G V +RG LP+V L V + K + +V+LQ+ R + Sbjct: 493 LEGDGVGKGIEYIHGAPVYRLRGSLLPLVSLNGVLGLDR-KKQQEIANIVVLQADDRTFG 551 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 L+VD++ ++VVK L + + + + ATI+GDG+VALI+DV L Sbjct: 552 LIVDEINDTEEIVVKPLSNLLKGLLCFAGATIMGDGTVALILDVMGLAQQA 602 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 64/134 (47%), Gaps = 12/134 (8%) Query: 515 MSVRVADE-VFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 + RV +E +PL+ V + + + + +GG V++ RG+ +P+V L ++ N+ G Sbjct: 631 LLTRVGEEGRIAVPLSNVNRLEEFKLSSVEH-SGGLEVVQYRGQIMPLVRLSQLLNLPGT 689 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIG--QHQVVV-KNLESNYRKVPGISAATILGDGS 630 V++ GR L+VD++ + Q+ V ++ + Y + + +L Sbjct: 690 DA-GEVLPVIVTSQQGRSLGLVVDKIEDVTEQQIAVNRSNDRMY-----LQGSAVLQQ-R 742 Query: 631 VALIVDVSALQAIN 644 V ++DV A+ A Sbjct: 743 VTDLLDVHAVMASV 756 >UniRef50_B0R4J9 Taxis sensor histidine kinase cheA n=4 Tax=Halobacteriaceae RepID=B0R4J9_HALS3 Length = 668 Score = 537 bits (1385), Expect = e-151, Method: Composition-based stats. Identities = 193/676 (28%), Positives = 324/676 (47%), Gaps = 48/676 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D+ + F E +E + + LL L+ + + E ++ IFR AH++KG G GF + Sbjct: 1 MDDYLEAFVREGEEHVTSLNNALLELESDPGNEEAMDEIFRTAHTLKGNFGAMGFEDASD 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS---FDYICQ 121 H +E+LLDE R+G +++ +D ++ E D ++ LD + + + D + + Sbjct: 61 LAHAVEDLLDEMRQGNLEVTSDRMDRIFEGIDGIEACLDEIQATGDVDRDVTGTIESVRA 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ----SRSQSPRRIILSRLKAGEVDLLEE 177 L ++ + T ++ A D + + + + D + Sbjct: 121 VLDEVDGDGGSGTTTSSGDAGSPAGDGDVDATRVVDADTIDAAEDPVYHIHIDMGDSQMK 180 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIA---EDDITAVLCFVIEADQITFETVEVSPKIST 234 + + L + + D L A D E L +D+++ Sbjct: 181 GVDGMFVLEEATEAFDLLGAEPSPDAINDGEYGDGFELVVATPSDEVSDTVAAFPKLSDA 240 Query: 235 PPVLKLAAEQAPTGRVEREKTTRSN---------------------------ESTSIRVA 267 E AP E ++ E S+RV Sbjct: 241 TVTAVGDDEHAPDADSGTEADASADDDADDAGTTADSGSSSGGSSAIDNTDTEIQSVRVD 300 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 V+++D+L LV +LV T+ L + E D +++ + +L + LQ++VM +R++ Sbjct: 301 VDQLDELHGLVEQLVTTRIKLRRGMEESD----REVLDELDELDKITSSLQDTVMDMRLV 356 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 PM+ + ++PRLVRDLA + K ++ + G ELD++++ I DPL HL+RN++DHGIE Sbjct: 357 PMKKIVGKFPRLVRDLAREQDKDIDFVVEGDDVELDRTILTEISDPLMHLLRNAVDHGIE 416 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--- 444 P R GK+ G + LSAE ++ I+V DDGAG++ + + KA +G+ E Sbjct: 417 KPAVREDNGKDREGTITLSAERDRDHVLIQVRDDGAGIDHDTMREKAIEKGVKTREEVQD 476 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 M DD+V L+F PGFST ++VTDVSGRGVGMDVV+ + ++ G V + S G GTT + Sbjct: 477 MPDDDVEDLVFHPGFSTNDEVTDVSGRGVGMDVVRDTVTRLDGSVSVDSTPGEGTTFTMT 536 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LP+T+AI+ + V E + +P+ V E + + GE V+ P+V L Sbjct: 537 LPVTVAIVKVLFVESGGEEYGIPIKTVDEISRMKS---VKSVDGEEVITYDETVYPLVRL 593 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 NV +T G++V ++ R+ A+ D + GQ +VVVK E +PG+S A Sbjct: 594 GDALNVP-DETRNGDGMLVRIRDSERQVAVHCDDVRGQEEVVVKPFEGILSGIPGLSGAA 652 Query: 625 ILGDGSVALIVDVSAL 640 +LG+G V I+DV+ L Sbjct: 653 VLGEGDVVTILDVATL 668 >UniRef50_C5BSE9 Chemotaxis protein CheA n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BSE9_TERTT Length = 822 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 210/487 (43%), Positives = 307/487 (63%), Gaps = 3/487 (0%) Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 V E + + + AD ++ + + V A + Sbjct: 319 EWVVDDAELVIAQESNSKPKPVADRVTKDVLQEQKAPQAQTPPTNVAAASPPEIPQTKPQ 378 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 + + A + + +S E+ SIRV ++KVD LIN+VGELVITQSML Sbjct: 379 VAAESTASVPTAKPAESAPKAKPAPAKKSAETGSIRVGIDKVDNLINMVGELVITQSMLG 438 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 Q ++ D L+ + QL++N R+LQESVM IRM+P+ + FSR+PR+VRDL LGK Sbjct: 439 QLGTDFDVNRLPKLLEGLSQLEQNTRELQESVMRIRMLPISFAFSRFPRMVRDLGQALGK 498 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 ++L ++G TELDK+++E+I DPL HLVRN++DHGIE+P RLA GK + G + L+A H Sbjct: 499 DLQLEMLGEHTELDKTVMEKIGDPLVHLVRNAVDHGIEMPADRLAKGKPANGKITLNAYH 558 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVT 466 QGGN+ IE++DDG GL+RE+I+ KA + L E +D++ LIF PGFSTA+ V+ Sbjct: 559 QGGNVVIEISDDGKGLDREKIIEKAIEKNLVTPLECETFTDEQAYDLIFQPGFSTAQAVS 618 Query: 467 DVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFIL 526 D+SGRGVGMDVVKRNIQ + G VEI+S + G+TI I LPLTLAILDG VRV + +I Sbjct: 619 DLSGRGVGMDVVKRNIQALNGIVEIRSTKDKGSTITIRLPLTLAILDGQLVRVGNNTYIF 678 Query: 527 PLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQ 586 PL +++ESL R ++ +AGG V ++R +Y+PI+EL+K F V + ++V++ Sbjct: 679 PLVSIIESLHCRREFINKVAGGCNVFKLRDDYVPIIELYKTFTVQPDAIDMDHSLIVVVD 738 Query: 587 SGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 G + ++VD+L+ Q QVV+K+LE NYR+V GIS ATILGDG+VALI+D++ + + + Sbjct: 739 YEGGKVGVVVDELLAQQQVVIKSLEQNYRRVDGISGATILGDGTVALILDITGIVKLAGD 798 Query: 647 QRMANTA 653 + + +A Sbjct: 799 KFVQTSA 805 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 14/235 (5%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D++ F+Q F++E+ E L ME L+ L P+ D+E +NAIFRAAHSIKGG+ TFGF+ Sbjct: 1 MTIDLAQFHQVFYEESFEGLDVMESALMELDPDNIDSETINAIFRAAHSIKGGSATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH +E +LD+ R G + + D +NL L++ D M+E L + + + Sbjct: 61 SVSEFTHDLETILDQVRAGTRKFSGDDVNLCLKSVDCMREMLQLLQGGDDGHTPLSMELK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 ++ T S + +PQ +V + ++G Sbjct: 121 HQFARMLSSDSDVTDSQECAPEQAPEQDPQGPTLWEIRFTPGSDILKTGNDVLRMLRDMG 180 Query: 181 HLTTL--------------TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQI 221 L L D S +L D + I + +VI+ ++ Sbjct: 181 DLGELLSVSCTPNLPAFNAFDAESCYLSWRILLESDCEKSAIQEIFEWVIDESEL 235 >UniRef50_C0QYB2 Chemotaxis histidine kinase CheA n=2 Tax=Brachyspira RepID=C0QYB2_BRAHW Length = 796 Score = 537 bits (1383), Expect = e-151, Method: Composition-based stats. Identities = 196/763 (25%), Positives = 353/763 (46%), Gaps = 117/763 (15%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M I + FF+EA E+L +EQ++L+L E + + + IFRA H++KG AG Sbjct: 1 MDDYIKSLLKDFFEEAFEMLDRLEQNILILDNERNNVDAIQEIFRAVHTLKGSAGAVELV 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 Q+ H E+LLD R +++++ I++ L+ DI+++ ++ + E I Sbjct: 61 ETQKYAHRFEDLLDLIRNNKIEVDDATIDVLLKGIDILKDLINTASEESEYSGDIEAEIK 120 Query: 121 QA-------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + L Q + G+ P+A + +++ L + Sbjct: 121 KLEDFKNMKLGQGPAPSSGDAPAAAAPSGNAPAAPEAEKKVNKYELLPNDSDLLGIIRDN 180 Query: 174 LLEEELGHLTTLTDVVKGADSL----------------------SAILPGDIAEDDITAV 211 + E L ++ + L GD + +T + Sbjct: 181 VEENVKTKLVHVSFDPESPMRTVGGVQVFVALKDVGEIMGSIPPLEALEGDEFYEHVTYI 240 Query: 212 LCFVIEADQITFE------------------------TVEVSPKISTPPVLKLAAEQAPT 247 L + E I + + A + P Sbjct: 241 LAAIKEDQTIIDAITLPDVTKEISIEEIILEEYEKFLQEKKQKEAQKATPASSGAAKKPD 300 Query: 248 GRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ----------------- 290 + +S+ +RV +++D ++N VGELV +S Q Sbjct: 301 AGKGGKDHKVERQSSFLRVESDRIDAMMNQVGELVTNKSSYIQYDDDLTSYQKIIGTGIN 360 Query: 291 ------------------------RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR- 325 + E+ + + + + + ++ R Sbjct: 361 EVKRYYRDSIVQILRKFEEHLQKKEAKEIRNTYIDGFNNKLNEFVKMEEEFKNTLDRFRN 420 Query: 326 --------------------MMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 M+P+ F+R+PRL+RDL+ LGK+V+L + G TELDKS Sbjct: 421 SYQLLTRVTNELQETVMKIRMLPIAQTFNRFPRLIRDLSRDLGKEVKLEMYGEETELDKS 480 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +IE ++DPL H++RN++DHGIE P++R AGK G ++LSA H+G I I+++DDG G+ Sbjct: 481 VIEVLVDPLVHIIRNAMDHGIEHPDEREKAGKPRTGTVVLSASHEGNLIIIKISDDGKGM 540 Query: 426 NRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 ++I A +GL ++ +S+ ++ IFAPGFSTA ++T+VSGRGVGMDVVK++++K Sbjct: 541 IPQKIFESAVKKGLVSADAKLSERQMLEYIFAPGFSTAAKITNVSGRGVGMDVVKKSLEK 600 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 + G V I+++ G G+T + +PLT+AI+ + V E + +P+N+++E+++ D+ Sbjct: 601 INGTVGIETEWGKGSTFFLRIPLTVAIIQALIVDAEKEYYAVPINSILETVKIDVKDIQE 660 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQ 604 L G V++VR + + ++ + ++F + VIL S G++ ALLV+ LIG+ Sbjct: 661 LE-GIEVIKVRDDVINVLSIKELFRLPSRYNNIKSYYAVILSSEGKKVALLVNNLIGEQD 719 Query: 605 VVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +V+K L+ N K G++ AT+LGDG+V+ I+D+ + ++ ++ Sbjct: 720 IVIKTLKDNITKSEGLAGATVLGDGTVSFILDIQTIVSLGTKR 762 >UniRef50_C4XR52 Chemotaxis protein CheA n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XR52_DESMR Length = 718 Score = 536 bits (1382), Expect = e-151, Method: Composition-based stats. Identities = 222/717 (30%), Positives = 341/717 (47%), Gaps = 74/717 (10%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D+ + +E ELL ++EQ LL L+ D +L+A FRA H+IKGG FGF Sbjct: 1 MPDVDPSIALYIEETRELLGELEQGLLELETNPADTARLDACFRAMHTIKGGGAMFGFEE 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + TH +E +LD R G++ ++ ++++L L KD + L+A + Q+ + D + Sbjct: 61 ISRFTHDVETVLDRVRTGDLPVSRELLSLTLAAKDHILTLLEAPRDQQDAHRNASDRLLA 120 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ--------------------------SR 155 + P P + Sbjct: 121 SFAAYLPGGAATAPDLAGDAGEPPILRPASGEHEYACPALPGPPSIYWVRLRPNPDMLLT 180 Query: 156 SQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLC 213 P R++ GE+ +L + D ++ A D++ V Sbjct: 181 GNDPVRLLAELDTMGEMHVLRHGPKPVLDNDDFDPERVYGLFDMLIATPCAVDNLRDVFI 240 Query: 214 FVIEADQITFETVEV-----------------------------------SPKISTPPVL 238 FV ++ + + Sbjct: 241 FVEGDSEVGIHHLHTGILRAADLDELLAALKGHDDEDLEVAGNRLEAALAAKLALIESAK 300 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 + + + + + + ++RV ++D L+++VGELVI QS L Q + D Sbjct: 301 QKSQTKKGSEPRAAPQAKAPAAAATLRVDAARLDSLVSMVGELVILQSRLRQAAKARDLD 360 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 ++ L+R +L++ + +RM+P+ VFS++ RL RDLA LGK VE G Sbjct: 361 AVTEVDED---LERLTDNLRDVALGLRMLPIGSVFSQFTRLTRDLAANLGKDVEFVAHGG 417 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 TELDK++I+RI DPL HL+RNSLDHG+E PE+R AAGK+ G + LSA H GGN+ I + Sbjct: 418 ETELDKTVIDRIKDPLVHLLRNSLDHGLERPEERQAAGKSPQGRVTLSANHSGGNVVIVI 477 Query: 419 TDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 DDG G++ + KA +GL E S+ E+ IFAPGFSTA +V+DVSGRGVGMDV Sbjct: 478 ADDGRGIDVAAVRRKAVERGLVAPEAEPSEKELLDCIFAPGFSTAAKVSDVSGRGVGMDV 537 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL-Q 536 VK+NI+ + G VE+ S G G T+ I LPLTLAI+DG +V V + FI+PL + + Sbjct: 538 VKKNIEALRGTVELASVLGQGATVTIRLPLTLAIIDGFNVMVGGDSFIVPLANLRGFQER 597 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLV 596 E + + ER+ G P+V L ++F+V G + + VVI ++ G V Sbjct: 598 FVEGQVRTVDTIERM----GSMAPVVSLRRLFDVPGDQPGYER--VVITEAEGETVGFCV 651 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 D++IG+ Q V+K+L+ YR + IS TI GDGS++LI+DV L R + + Sbjct: 652 DKVIGRQQAVIKSLDDCYRHLKWISGTTINGDGSISLILDVPQLVRFVRGREDSRLH 708 >UniRef50_A6M0J9 CheA signal transduction histidine kinase n=5 Tax=Clostridiales RepID=A6M0J9_CLOB8 Length = 691 Score = 536 bits (1381), Expect = e-150, Method: Composition-based stats. Identities = 200/693 (28%), Positives = 349/693 (50%), Gaps = 54/693 (7%) Query: 3 MDISD-FYQTFFDEADELLADMEQHLLVLQPEAP-DAEQLNAIFRAAHSIKGGAGTFGFS 60 MD + + F E +++ ++Q ++ + + E +N IFR H+IKG +G F Sbjct: 1 MDTREPMLEMFIFETFDMIEQLQQLIIDSEKNKRLETEAINEIFRIMHTIKGSSGMMMFD 60 Query: 61 VLQETTHLMENLLDEARR---GEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS-- 115 + +H +E+L R G++ + + +L LE D+++ + + +++ D Sbjct: 61 NISNLSHTIEDLFYFIRESKPGKIDYS-KLTDLVLEGSDLIKIETEKINNNKDTDGDFTL 119 Query: 116 -FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + L+ L + S + E +++ + R L + + Sbjct: 120 FIEKVKGFLKLLKTYDENSEDSGNGGADELVSEEDVEQKYYLSTDRVNSNLNLFSATLFF 179 Query: 175 LEE---ELGHLTTLTDVVKGADSLSAILPGDIAEDD--------------------ITAV 211 EE E T+ +K +S P DI E++ I + Sbjct: 180 DEECDMENIRCFTVVHQLKEISEVSYYYPEDIIENNDTCEIIKKQGFKIFFKTNQSIEDI 239 Query: 212 LCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE------------------ 253 ++E + + + + + Sbjct: 240 RTLLMENAFLNNVDINKFYSEIEFSEQFSEQFSKKNEKPQEDIIKSINNIVNDTNDNEKV 299 Query: 254 -KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + S + + I V V K+D+L++LVGELVI+++M+ + + E+ + + Q ++ Sbjct: 300 ASKSLSYKQSLISVDVNKLDKLMDLVGELVISEAMVTK-NPEISELQLDSFNKAARQHRK 358 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 DLQ+ VMSIRM+ + ++ R+VRD+ KL K+VEL ++G TE+DK++IE I D Sbjct: 359 RLSDLQDVVMSIRMVSLASTLTKMNRIVRDMCKKLNKEVELEIIGQETEVDKNIIEHIGD 418 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H+VRNS+DHGIE E+RLA GK S+G + + A++ GG + I + D+G GLN+++IL Sbjct: 419 PLMHIVRNSMDHGIETKEERLANGKPSIGKITIEAKNTGGEVWIIIKDNGKGLNKDKILK 478 Query: 433 KAASQGL--TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 KA GL +++D E+ +IF PGFST E VT+ SGRGVGMDVV I+K+ G V Sbjct: 479 KAKDNGLLKVKENDLTDREIYSMIFLPGFSTKENVTEFSGRGVGMDVVTNEIEKIRGIVT 538 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 + S G TT I +PLTLAI+DGM+++V VF +P+ ++ +S ++ D+ Sbjct: 539 VDSIPGEETTTSIKIPLTLAIIDGMTIKVGKSVFTIPVTSIRQSFIIKKEDIIRDIDNNE 598 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 ++ +RGE I++L + +N+ GIV++++ G+ + D+LIG+ QVV+K L Sbjct: 599 MILIRGECYSILKLHEFYNIKTNVVNIEDGIVIMVEDQGKAKCIFADELIGEQQVVIKAL 658 Query: 611 ESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 +KV IS ++LGD +++LI+D+S + + Sbjct: 659 PEYIKKVKAISGCSLLGDATISLILDISEIVNL 691 >UniRef50_B7RR38 Chemotaxis histidine protein kinase, CheA1 n=1 Tax=Roseobacter sp. GAI101 RepID=B7RR38_9RHOB Length = 698 Score = 534 bits (1377), Expect = e-150, Method: Composition-based stats. Identities = 227/678 (33%), Positives = 361/678 (53%), Gaps = 40/678 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQ----PEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 +++ Q FF E +E L ++ L L+ PD E +N +FRA HSIKGGA +F Sbjct: 4 LNELRQIFFQECEEQLEELTDGLSELELLQPDHEPDPETINRMFRAVHSIKGGAASFSLD 63 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + H E +LDE R G++ ++ +II +F D + + + + PD + Sbjct: 64 AITQYAHAFETILDELRSGKLTMSREIIPVFYRGADRLTDFIALGEAGSVPDVSELANDI 123 Query: 121 QALRQLALEA-------------KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL 167 + L+ ++ P A++ + A + + S + Sbjct: 124 SEITALSSDSHQIGEVEFGDDCIAEFVPVALSFAADGADLSDTEHGNYSIKFKPTKALYS 183 Query: 168 KAGEVDLLEEELGHLTTLT-----------DVVKGADSLSAILPGDIAEDDITAVLCFVI 216 E L EL L ++ DV S +L E ++ V F Sbjct: 184 NGHEPVQLFRELETLGSVDISFSLGGAAAWDVNDPDISWHILLSSGCLESEVYEVFEFAH 243 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQA----------PTGRVEREKTTRSNESTSIRV 266 + +I E ++ I A + + +S + ++RV Sbjct: 244 DLAEIQIEILKTEKPIFESSERPAPALSQLEINAGGLANAEEKETSPEKAKSAQKATVRV 303 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 +E VD+LIN+VGELVITQ+++ Q +E + L T++ + R +QE VM IR Sbjct: 304 DLELVDELINMVGELVITQAVMTQSITESELSVSRQLATTLDDFKTLTRTIQERVMGIRA 363 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 ++ +F R R+VR+ A GK+V G TE+D+++IER++DPLTH++RN++DHG+ Sbjct: 364 QSVKPLFQRMGRIVRETAQIAGKEVRFITEGEDTEVDRTVIERLVDPLTHILRNAIDHGL 423 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENM 445 E ++R+ GK G++ LSA H+ G + IEV DDG G+NRE++L+ A +GL + Sbjct: 424 EHTDRRIEVGKVPNGSVKLSAAHRSGRVVIEVNDDGGGVNREKVLSSAIEKGLVSETAKL 483 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 D E+ L+F PGFSTA +T++SGRGVGMDVV I+++GG V I S G GTTI I L Sbjct: 484 GDAEIDRLLFLPGFSTASAITNLSGRGVGMDVVNSEIRRLGGRVSIISTPGQGTTISISL 543 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 PLTLA+LDGM V VA++ ++P++A+ E+++P + +H + R++ VR LPI++L Sbjct: 544 PLTLAVLDGMVVNVANQTMVVPISAITETIRPEASKVHLIGPEARMISVRDLMLPIIDLG 603 Query: 566 KVFNVAGAKTEATQGIVVILQSG-GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 +F + GI++I++ G ++AL VD ++ Q QVV+K+LESNY VP ++AAT Sbjct: 604 TIFGFEPERKLGQDGILLIVEDDKGDQFALAVDHILDQRQVVIKSLESNYGHVPYVAAAT 663 Query: 625 ILGDGSVALIVDVSALQA 642 ILGDG +ALIVD+ + Sbjct: 664 ILGDGQIALIVDLDEITN 681 >UniRef50_B4X286 Hpt domain protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4X286_9GAMM Length = 2409 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 174/658 (26%), Positives = 302/658 (45%), Gaps = 33/658 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + + + F +E++EL ++ L + A+ ++ + RA H++KGGA G Sbjct: 1633 ADSDPEILEIFLEESEELSDIIDACLTSWKDHPESADFIDDLKRALHTLKGGARLAGLKQ 1692 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L + +H E L E L+ D + +++ + + +A + Sbjct: 1693 LGDISHDFETYLLELESRRQTPAQSDFQPMLDWHDQINRGMESVAAAAQTNAPVAETPDA 1752 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 A P+A + + + D + R + + R+ A ++ L G Sbjct: 1753 A------APANTLPAATDKQPAPQQPQKDDRRQRQNQAQPQEMVRVGADVLEALVNLAGE 1806 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 + V+ + F +E T + + + L Sbjct: 1807 TSINRGRVEQGIT----------------EFAFNVEEMGNTVQRLYEQLR-----RLDSE 1845 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 E ++ + + +++ +L + +L + S L + L N Sbjct: 1846 TEAQIMSNYQKGVDLGEYDEDFDPLEMDQYSELHQITKQLSESASDLLDLKNTLLDRN-K 1904 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 D T + Q R +LQE +M RM+P + R R+VR ++G++ K+V+ ++ E Sbjct: 1905 DTETLLLQQARINTELQEKLMRTRMVPFSRLVPRLRRIVRQISGEVDKRVDFDVLNPEGE 1964 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LD+SL+ER++ PL H++RN++DHGIE E R +AGK+ G + L +GG + I ++DD Sbjct: 1965 LDRSLMERVVAPLEHMLRNAVDHGIETSEGRQSAGKDGTGRINLELGREGGEVVITLSDD 2024 Query: 422 GAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G G++ + + KA +GL ++ +S+ E+ IF GFSTA VT +SGRGVGMDVV Sbjct: 2025 GKGIDTDAVRQKAIERGLIAADAQLSEQEIQQFIFHAGFSTAAAVTQISGRGVGMDVVAS 2084 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 I++MGG V I S++G GT I LP TLA+ + V+ A++ + +PLN + ++ Sbjct: 2085 EIKQMGGSVTIDSRKGQGTRFIIRLPFTLAMNRALMVKAAEDSYAIPLNQIEGIVRISPF 2144 Query: 541 DLHPL-AGGERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIVVILQSGGRRYALLV 596 +L V G+ + L + V + + T V++++S A++V Sbjct: 2145 ELQHYFEEENPVYTYVGQDYELQYLGHFVHGNRVPHLENQTTPMPVLLIRSTEHTVAIVV 2204 Query: 597 DQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 D L+G +VVVK + V GIS ATILGDGSV +I+D+ +L Q A A Sbjct: 2205 DDLVGSREVVVKAVGPQLATVAGISGATILGDGSVVIILDIHSLIRAAHVQTTALAAG 2262 Score = 119 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 11/287 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA+E+L L + D+ ++++ R H++KGGA G + + + Sbjct: 1285 DPELVELFLEEAEEILESASHILDQWEAG--DSSNVSSLQRDLHTLKGGARMAGVAPVGD 1342 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +ENL + G+++ + + L + D + ++ + + A + A++ Sbjct: 1343 LAHELENLYEGYNAGQLESDAALFQLLHQCHDSLAVMIENLQAN--IAPADAPALVAAIQ 1400 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + +S S + + + E+ T Sbjct: 1401 AFIRGEAPGAVTPSAPDDDSTSPFSNTGESESADSPVMPAANATDAPAPVAVEDAPEPTE 1460 Query: 185 LTDVVKGADSLSAILPGDIAE--DDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + L I + E + L I E + + T A Sbjct: 1461 APPQPERDPELVEIFLEEADEILESAGNSLELWISQQDNLIELQSLQRDLHTLKGGARMA 1520 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVE-----KVDQLINLVGELVIT 284 E G + E T ++A+E + + + + E+V Sbjct: 1521 EVPELGDLGHELETLYEGLAQSQLAIEPTLFDLLHRCHDQLAEMVEA 1567 Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 56/387 (14%), Positives = 118/387 (30%), Gaps = 70/387 (18%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EADE+L L + + + +L ++ R H++KGGA L + Sbjct: 1468 DPELVEIFLEEADEILESAGNSLELWISQQDNLIELQSLQRDLHTLKGGARMAEVPELGD 1527 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + + ++ + + +L D + E ++A K ++ + + + A+ Sbjct: 1528 LGHELETLYEGLAQSQLAIEPTLFDLLHRCHDQLAEMVEALKANRPLPSG--EVLISAIH 1585 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG---- 180 A + G T + + P + S++P + A + D E L Sbjct: 1586 GYAADPAGFTLPTMAASPAAQPASPPPATAASEAPAPANTAADDAWQADSDPEILEIFLE 1645 Query: 181 -----------------HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 D + L G + + + + Sbjct: 1646 ESEELSDIIDACLTSWKDHPESADFIDDLKRALHTLKGGARLAGLKQLGDISHDFETYLL 1705 Query: 224 ETVE-----------------------VSPKISTPPVLKLAAEQAPTGRVE--------- 251 E + + AE Sbjct: 1706 ELESRRQTPAQSDFQPMLDWHDQINRGMESVAAAAQTNAPVAETPDAAAPANTLPAATDK 1765 Query: 252 ------------REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD--- 296 R++ ++ +RV + ++ L+NL GE I + + Q +E Sbjct: 1766 QPAPQQPQKDDRRQRQNQAQPQEMVRVGADVLEALVNLAGETSINRGRVEQGITEFAFNV 1825 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMS 323 + QL+R + + +MS Sbjct: 1826 EEMGNTVQRLYEQLRRLDSETEAQIMS 1852 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 70/195 (35%), Gaps = 1/195 (0%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F EA LA + Q L + + +++ RA H++KG A + E Sbjct: 983 LLEIFSSEARRNLALIAQWLAGNDTDLSEHPVDDSVHRALHTLKGSARMAEIEAVAEVAE 1042 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E L + + N ++L ++ D++ LD + D + Q+L Q Sbjct: 1043 PAEKLARDLISSNRRANQQQVDLLAQSHDLILTSLDQLDPTPPAHLPGADALIQSLNQQR 1102 Query: 128 LEAKG-ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 + +G ++P + V SE D ++ + + + + L + + Sbjct: 1103 DQLQGCDSPGPDPHILSVFLSEGMDLIVDAEQLLSQWAQHPEHTDELVRLRDELELLSNS 1162 Query: 187 DVVKGADSLSAILPG 201 G + + + Sbjct: 1163 ATTAGLNEIHDLAAA 1177 Score = 76.8 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 38/243 (15%), Positives = 71/243 (29%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +E E+L ++++ D E L RA H++KG G S + E +EN Sbjct: 693 FQEEVGEVLDALDEYFPRWAANTSDEESLVEFRRAFHTLKGSGRMVGASTVGELGWSVEN 752 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 +L+ + +I L E ++ + ++A+ Q A A Sbjct: 753 MLNRVIDRTIVPTAVLIALVQEVRNRVPALVNAFTLRQPDPFDVQPLADAADTLAAGGQI 812 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 + P V S + + + + + + + LT L Sbjct: 813 DQVPVIVADDSTTDAIDDTATDTIADVSPDAPDTLVLEADAHSEPDSTLELTELPSAENA 872 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 S A T ++ + + L E E Sbjct: 873 DAPSSEHTLSAEDLAAFDAAASEDTLTPWDTDDSSDDIHVLPVDNDLTEIDESLTLDLPE 932 Query: 252 REK 254 +E Sbjct: 933 QEP 935 Score = 42.5 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 47/316 (14%), Positives = 90/316 (28%), Gaps = 7/316 (2%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E E L +Q L DA ++ H + G F ME L Sbjct: 16 EIQETLNQAQQALESFVDNPDDATRMRFCQTHLHQVYGTLQMVEFYGAALLAEEMEKLAQ 75 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGET 134 G + TD + + LD ++ + LR E+ Sbjct: 76 ALLDGNVGNVTDSQETLMRAILQLPPYLDRVASNRRDLPVVLLPLLNDLRAARGESLLSE 135 Query: 135 PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL---EEELGHLTTLTDVVKG 191 S A + Q PR I+L++ + ++ + Sbjct: 136 TSLFKPDLSEATGQGQIPDDLLNDPRFILLAKKIRQMFQIALLGVLRNDNMGENLGYMAK 195 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 + + GD + ++ ++E + S K+ V + E A G Sbjct: 196 VFTKLEQVTGDAPRAPLWSISNALVEGLSEDAIILGTSVKLMLGHVDRNLRELAVEGAAS 255 Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS---MG 308 + + ++ V K D + + V + L + D VN + Sbjct: 256 LNRPAPTELIKNLLYYVAKADVDSPRIRD-VKARFRLDEALPSDDLVNEERQRMTGPDAQ 314 Query: 309 QLQRNARDLQESVMSI 324 + + L E + ++ Sbjct: 315 AMNSVVQALSEELTTV 330 >UniRef50_B0SHI1 Chemotaxis protein histidine kinase n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SHI1_LEPBA Length = 731 Score = 533 bits (1374), Expect = e-150, Method: Composition-based stats. Identities = 210/724 (29%), Positives = 339/724 (46%), Gaps = 90/724 (12%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD+++ + E+DELL +ME LL + P + +NAIFRA H+IKG AG FGF Sbjct: 1 MDLTEVIDAYLVESDELLREMEVILLRTESSLPTEDDMNAIFRAVHTIKGTAGMFGFDST 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQL----------DAYKQSQEPD 112 H++ENLLDE R + + + L+ KD + + D Q Sbjct: 61 VSFAHVVENLLDELRSKTIPFQIPLTEILLKAKDHLSYLVSEETRGKISSDKLSFGQNIL 120 Query: 113 AASFDYICQAL------RQLALEAKGETPSAVTRLSVVAKSEPQDEQ------------- 153 ++ ++ Q + E+ E+ + + S + + D + Sbjct: 121 DEMKPFLLASVAPNPIQNQSSNESVAESNTTIHHQSNLEQKSENDSKNSISSYLISFRPN 180 Query: 154 ----SRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL--SAILPGDIAEDD 207 S P I K G + L+ L + L D + Sbjct: 181 QNVFSHGLDPISFIGYLKKIGTILSLKTIEQFLPEGNEYDPENCYLGFEINFKTDKDLET 240 Query: 208 ITAVLCFVIEADQITFETVEVS-------------------------------------- 229 + V F+ + + + Sbjct: 241 VQKVFNFIEQDCFLHIYPPGFNVLDLVDLSNQLPEEEIFLGNIWKEIQILNDETFLLYLE 300 Query: 230 ----PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVD-----QLINLVGE 280 K P + + + + + KVD LIN VGE Sbjct: 301 EIKIRKTGIPSTALAHTDSHTNLKTKITPEIPEQSKETQKSMTIKVDSKRIDNLINRVGE 360 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLV 340 LV++ + + Q + D +L S + R +++E + +RM+P+ F +Y R+V Sbjct: 361 LVVSCANMNQLIGDSDD---SNLQESSQMVIRLLNEVREISLKLRMVPIGESFQKYSRIV 417 Query: 341 RDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSV 400 RDL L K + L G TELD++++E++ DPLTHLVRN+ DHG+ELPE RL GK Sbjct: 418 RDLGKDLQKDIRLITEGDETELDRNIVEKLSDPLTHLVRNACDHGLELPEDRLNVGKPKQ 477 Query: 401 GNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM-SDDEVAMLIFAPGF 459 G + L+A H+ GN+ IEV+DDG G+++E++ K +GL E SD+EV L+F PGF Sbjct: 478 GTIRLNAYHEAGNVIIEVSDDGNGISKEKVWKKGIEKGLVTGEIPDSDEEVYKLLFHPGF 537 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 STA Q+T+VSGRGVG+DVV +NI+ + G + ++S G+ + LPLTLAI++G V V Sbjct: 538 STASQITNVSGRGVGLDVVSKNIEALRGTITVKSTPSQGSRFILRLPLTLAIIEGFLVAV 597 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 FI+P+ V+E L + H + +RG +P + L + ++ EA + Sbjct: 598 GKSHFIIPMEMVLECLHFSDD--HKTESNQ-FFALRGNLIPFLRLKDYYPCE-SEEEAFR 653 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSA 639 +VI+++G ++ ++V++L+G++Q V+K + S +R V G+S ++ILGDG+VALI+DV + Sbjct: 654 ENIVIVRNGEKKAGIVVEKLLGEYQTVIKPMGSVFRHVKGVSGSSILGDGNVALIIDVPS 713 Query: 640 LQAI 643 L Sbjct: 714 LFER 717 >UniRef50_B0MR50 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MR50_9FIRM Length = 705 Score = 533 bits (1373), Expect = e-150, Method: Composition-based stats. Identities = 200/698 (28%), Positives = 329/698 (47%), Gaps = 62/698 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQ-PEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + + + E + LL +++ LL + E +N IFR H+IKG + GF LQ Sbjct: 8 MESMLEMYIFETNTLLEQLDEILLRTEDANVFSQEDINEIFRIMHTIKGSSAMMGFENLQ 67 Query: 64 ETTHLMENLLDEARRGEMQLNTDII--NLFLETKDIMQEQLDAYKQSQEPDAASFDY--- 118 H E++ R L E D+ + +++ + S + D D+ Sbjct: 68 HLAHKGEDMFFVIREKPEIAKDAHFVYELIFEVSDLYKAEIEYIQNSGDDDYTPTDFSET 127 Query: 119 ---ICQALRQL-ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + A +L A+E+ + A + P R+ E Sbjct: 128 FKKLEDATERLKAMESGAAPAESAPAAKQEASAAPAGSNVEGSMTVRVFFEDGCKMENLR 187 Query: 175 LEEELGHLTTLTDVV---KGADSLSAILPGDIAE--------------DDITAVLCFVIE 217 L + + +V+ +A DI E D + + + Sbjct: 188 AFLLLTKIKDVAEVISCTPPDVESNADTAKDIVENGFLVTFKGFDGDNDTVIKAIEGAVN 247 Query: 218 ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVER------------------------- 252 + + P E AP + Sbjct: 248 VESYEIIDTPSAAPAEEKPAPAPVKEAAPVAAPAKTEEKPQAQPAPAKPAAKSAVTKAQE 307 Query: 253 --EKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 +K + + I V + K+D L ++VGE++ T+SM+ + +L+ + + QL Sbjct: 308 DIKKANGGQKQSLISVNLSKLDTLHDIVGEIITTESMVI-ANPDLEGLELESFSKAARQL 366 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 ++ +LQ++VMSIRM+P+ VF + R+VRD+ KL K+ EL L G +TE+DKS+++ + Sbjct: 367 RKLTDELQDTVMSIRMVPLAGVFQKMGRIVRDMKIKLNKEAELVLEGETTEVDKSIVDNL 426 Query: 371 IDPLTHLVRNSLDHGIEL-PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 DPL HLVRN +DHGIE R+A GK G + LSA+H G + I V+DDGAG+N E+ Sbjct: 427 NDPLMHLVRNCMDHGIEDDINVRIAEGKPEKGTVKLSAKHSAGEVIITVSDDGAGINCEK 486 Query: 430 ILAKAASQGLTV--SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 +L KA GL + E+ +I PGFST + VT+ SGRGVGMDVV+ NI++ GG Sbjct: 487 VLEKAKENGLLTKPESEYTTKEIQNMILLPGFSTNDTVTEYSGRGVGMDVVRSNIEQCGG 546 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 + ++S++G G++ I +PLTLAI++GM ++V +F +P++++ ESL L Sbjct: 547 TLTVESEEGKGSSFIIRIPLTLAIVEGMKLKVGSTIFTVPISSIKESLMVANNQLLNDTK 606 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607 ++ +RG PI+ L + FN+ T+ GI++++ GG+ L D+LIG+ VVV Sbjct: 607 QGEMIMIRGVCYPILRLHEKFNMPTEVTKLEDGILLLVDVGGKNVCLFADKLIGEQPVVV 666 Query: 608 KNLESNYR----KVPGISAATILGDGSVALIVDVSALQ 641 K K G+S T++GDG+++LI+DV+ L Sbjct: 667 KPFPKYLSQYNIKAEGLSGCTVMGDGTISLIIDVNNLI 704 >UniRef50_A4XHP2 CheA signal transduction histidine kinase n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XHP2_CALS8 Length = 650 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 191/651 (29%), Positives = 330/651 (50%), Gaps = 14/651 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVL-QPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F E+ +LL D+E + L + + N I R H++KG + +S + + Sbjct: 7 DPLFEIFIAESKQLLNDLENIFICLKERKLILKNVNNDIMRIFHTLKGSSAAMKYSDISQ 66 Query: 65 TTHLMENLLDEARRGEMQLN--TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H E+L + + N +IN FL+ D + +D+ + + + + + Sbjct: 67 VCHKAEDLFVKLNSIHITPNIVDQLINCFLKVIDCLNLDIDSIETTDFSASRTAQKLIDQ 126 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 L + E + + + + + + ++A V +++G + Sbjct: 127 LIENINENQNTASVD------NIEKTKKKYRIKVFFEDGAGMENVRAYGVIWKLKDVGDI 180 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 T D +A + + + + E Q+ + + +S I ++ Sbjct: 181 IDYTPKNIQNDPNTADVIQKKGFELVIETVLEKDEVFQLFDDVLYLSN-IEIEFADNMSN 239 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E+ + + I V VEKVD++I+L+GEL+I S L L + D Sbjct: 240 EEFSQNGSKLGGGNTNLGQKIINVNVEKVDKIIDLIGELLINFSGLVLSVESL-GIASED 298 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 S ++ R +LQE MS+RM+ + F R R+ +++ KL K+V + + G TEL Sbjct: 299 FKKSYSKVSRVINELQEIAMSMRMVSLSNTFQRLRRVALEVSEKLHKKVTVYVTGEETEL 358 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+ +IE I DPL HLVRN++DHGIE P++R GK GNL + A+ + I + DDG Sbjct: 359 DRMMIEHITDPLIHLVRNAIDHGIETPDERRKQGKAEEGNLYIHAKSTNSEVLITIQDDG 418 Query: 423 AGLNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 G++RE+IL KA +G+ N++D+++ LIF PGFST ++ T+ SGRGVG+D+VK N Sbjct: 419 RGIDREKILEKALEKGIIKSKNNLTDEDIYSLIFMPGFSTKDEATEYSGRGVGLDIVKNN 478 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 I+++GG + + S++G GT+ + +PLTLAI+DGM V + + F++P+ +++E ++ Sbjct: 479 IERIGGKILVTSEKGRGTSFTLKIPLTLAIIDGMLVELNSKKFVIPITSMVEIIRLDTDK 538 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKV-FNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 + L G++ + +R E P+V+L K+ F T I V+++ G++ LLVD LI Sbjct: 539 II-LEAGKKFILLREECYPLVDLKKIFFGKETEFNSNTFNIGVMIEENGKKAVLLVDNLI 597 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 Q Q+V+K L R +S T+LGDGS+ALI+D+S L R Sbjct: 598 SQQQIVIKPLPLLLRNAQVVSGCTLLGDGSIALILDISGLFEHIRVTERRR 648 >UniRef50_Q47I49 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt n=22 Tax=Proteobacteria RepID=Q47I49_DECAR Length = 784 Score = 533 bits (1373), Expect = e-149, Method: Composition-based stats. Identities = 264/569 (46%), Positives = 349/569 (61%), Gaps = 14/569 (2%) Query: 89 NLFLETKDIMQE-----QLDAYKQSQEPDA-----ASFDYICQALRQLALEAKGETPSAV 138 F + D + E ++ EPD + A + V Sbjct: 213 EAFADQIDFIAENGAWRVVEGKLSVGEPDPAFGFFDDSPGTPDDDQGYGFFAPLDPSPIV 272 Query: 139 TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI 198 + ++ P + + + D + G L+ K + L Sbjct: 273 ENAAASEQAGDDGYGFFEALPATNVPELMPSVGADDEGDGYGFFAPLSAAEKTPEVLEE- 331 Query: 199 LPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE-QAPTGRVEREKTTR 257 GD + V ++ P V+ + ++ + Sbjct: 332 --GDGFGFFVPVSPSAVSSVPATQIPSLIAEIDSPLPAVVPEKSPVESRARAAKAAGPAV 389 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 + +SIRV++EKVDQLINLVGELVITQ+ML Q ++++ L+ + QL+RN RDL Sbjct: 390 AAGESSIRVSIEKVDQLINLVGELVITQAMLLQTATQMQESAPERLVNGLAQLERNTRDL 449 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QESVMSIRMMP+ +VFSR+PR+VRDL+GKLGKQVEL G +TELDKSLIERI DPLTHL Sbjct: 450 QESVMSIRMMPISFVFSRFPRVVRDLSGKLGKQVELKTSGETTELDKSLIERIADPLTHL 509 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RNSLDHGIELPE R+AAGK+ +G + L A HQGGNI IEV DDGAGL R +ILAKA + Sbjct: 510 IRNSLDHGIELPENRIAAGKSPIGTITLKAYHQGGNIVIEVGDDGAGLPRNKILAKARER 569 Query: 438 GLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGT 497 G VS+ M+D EV LIF GFSTAEQVTDVSGRGVGMDVV+RNIQ MGG VEI+S G Sbjct: 570 GFQVSDQMTDSEVFNLIFEAGFSTAEQVTDVSGRGVGMDVVRRNIQSMGGRVEIESMLGV 629 Query: 498 GTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGE 557 GT + + LPLTLAILDGMS+ + D+ +ILPL+ V+ES QPR D+ L+ RV++VRGE Sbjct: 630 GTRMTVRLPLTLAILDGMSIALGDQTYILPLSYVIESFQPRMGDIKTLSNQARVIQVRGE 689 Query: 558 YLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKV 617 YLP+V L ++FN+ + + TQGI+V++ + G + AL VD L+GQHQVV+K+LE+NYR+V Sbjct: 690 YLPVVVLHELFNIKPSANDFTQGIMVVIDADGVKAALFVDALVGQHQVVIKSLEANYRRV 749 Query: 618 PGISAATILGDGSVALIVDVSALQAINRE 646 GIS ATI+GDG VALI+DVSA+ + + Sbjct: 750 QGISGATIMGDGHVALILDVSAIAGMAKT 778 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 7/224 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++D+S FYQ FFDE+ E LA ME LL L + PD+EQLNAIFRAAHSIKG AGTFGF+ Sbjct: 1 MAIDMSQFYQVFFDESAEHLAAMEGLLLDLDIDNPDSEQLNAIFRAAHSIKGSAGTFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYI 119 L ETTH++ENLLD R+ E+ L D+++ FLE D+++ L+A++ + + D S I Sbjct: 61 DLAETTHILENLLDRIRKQELGLRADMVDAFLECGDLLRGMLEAHQGRGEAVDPQSVASI 120 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 C LR+L+ + + + + P ++ K V L +EL Sbjct: 121 CARLRELSTDLPPDLAQGGGKALAEGVAAPSVDKRVFDIQFVPTEISAKGDGVTNLLDEL 180 Query: 180 GHLTTLT------DVVKGADSLSAILPGDIAEDDITAVLCFVIE 217 L L + L D+ ++ + F+ E Sbjct: 181 KSLGQLEILSQPDADIHSVGYWQVRLISDLGQEAFADQIDFIAE 224 >UniRef50_A1QZZ9 Chemotaxis protein CheA n=5 Tax=Borrelia RepID=A1QZZ9_BORT9 Length = 717 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 209/722 (28%), Positives = 346/722 (47%), Gaps = 85/722 (11%) Query: 2 SMDI-SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S D+ F +F +E+ E ++D+E LL ++ E+ E +N+IFR H+IKG AG FGF+ Sbjct: 3 SSDMIDKFKDSFKEESIENISDIEHALLNIEFESG-KEVVNSIFRNFHTIKGSAGMFGFN 61 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + H +E +LD + G + N D ++ L D ++E ++ + E + + I Sbjct: 62 LTASLVHEIETVLDPIKEGSDEFNQDTVDATLMAVDFIRELIEGDEAIDESAYKNREKIL 121 Query: 121 --------------------------------------------QALRQLALEAKGETPS 136 +L Q E + Sbjct: 122 IDTIKKGFGLGVDVGLNTDSVLSSTGGDQISLSNDLDSQGAFLDASLEQGKFEDEALNVE 181 Query: 137 AVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLS 196 + + S L L G+V + + L L Sbjct: 182 TKIYKILFSPSRGILFHGHKPINFLKKLLNLGNGQVRARVKNIPDLE-LMSPDNVYVEWE 240 Query: 197 AILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE----- 251 L + ++ I + F+ + E V+ S + L G E Sbjct: 241 VKLETEESKSSIEDIFMFLDGQSKFVVEEVDSSYDMPEAFELDSLVNNLDKGVDEVCSKE 300 Query: 252 -----------------------REKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 + SI+V +K+D L+NLVGELV QS L Sbjct: 301 KQNSSKTEEIFNKTALKGGANFNDDTAKSKVNIASIKVDSKKLDHLVNLVGELVTIQSKL 360 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 + E + N+ L + + +L++ +R +P+E +F ++ R+V+DL+ +LG Sbjct: 361 ---AKEAESSNNNILNSISAEFSLLINELRDYTTGLRTVPIEILFVKFQRIVKDLSAQLG 417 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K + G T LDKS+IER+ +PL HL+RN++DHGIE E+R+ AGK+ G + LSA Sbjct: 418 KSIRYHSQGGDTVLDKSIIERLNEPLVHLIRNAIDHGIEPAEERIEAGKDPQGVIKLSAH 477 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQV 465 G ++ I + DDG GLN+ +I+ +A + + +SD ++ LIF PGFSTA+ V Sbjct: 478 QSGDSVIIIIEDDGRGLNKRKIIKRAIERYIISDAVSRTLSDVDIYNLIFEPGFSTADVV 537 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 T+VSGRGVGMDVVK+ ++ + G+V ++S+ G T I+++ PLTLAI++G VRV DE FI Sbjct: 538 TNVSGRGVGMDVVKKQVESLRGNVILESEFGKYTRIKLIFPLTLAIIEGWLVRVRDEHFI 597 Query: 526 LPLNAVMESLQPRE--ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVV 583 +PL++V L+ + + + V+ RG + + L + F ++ ++++ VV Sbjct: 598 VPLSSVESCLEADKLMSKVCGFENNSNVMNYRGSMISFIRLREFFEISDEESDSEH--VV 655 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 ++ + + ++VD+++GQHQ V+K L Y KV G+S ATILGDGS+AL+VD+ + + Sbjct: 656 VVNANSGKIGIVVDEVLGQHQTVIKTLGKIYSKVEGVSGATILGDGSLALVVDIDTITKV 715 Query: 644 NR 645 R Sbjct: 716 IR 717 >UniRef50_B7J2C9 Chemotaxis histidine kinase n=20 Tax=Borrelia RepID=B7J2C9_BORBZ Length = 714 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 213/714 (29%), Positives = 349/714 (48%), Gaps = 79/714 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 I F +F +E+ E ++D+EQ LL L+ + D + +N+IFR H+IKG +G FGF+ Sbjct: 7 IDKFKNSFKEESIENISDIEQALLNLEV-SSDQDIVNSIFRNLHTIKGSSGMFGFNFTAS 65 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA---------- 114 H +E +LD + G+ N I+ L + D ++E ++ + E D Sbjct: 66 LVHEIETVLDVVKNGKAAFNQAAIDATLMSVDFIRELIEGDEVISEIDFDKRKQFLVNEI 125 Query: 115 ------SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEP--QDEQSRSQSPRRIILSR 166 S D L + S+V SV SE DE +S+ IL Sbjct: 126 RKVLDISNDVKGAFQEALENDFSKSDNSSVLEESVKVNSENKFDDEALQSEFKSYKILFS 185 Query: 167 LKAGEVDLLEEELGHLT--------------------TLTDVVKGADSLSAILPGDIAED 206 G + + + L+ L L + + + Sbjct: 186 PAKGILFHGHKPINLLSKLINLGSGYVRAKVDNIPDLELISPDNVYVDWEIRLDTEESRE 245 Query: 207 DITAVLCFVIEADQITFETV------------------------------EVSPKISTPP 236 I + F+ +I + + S + S Sbjct: 246 SIEDIFTFLDSQSKIDIQELDKCLEANEGDNVESKNFNLLHLDRNSKDLTNSSFEKSEFV 305 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 ++ + SI+V +K+D L+NLVGELV QS L+ E + Sbjct: 306 GKSFFNGDKNRSNIQDDTARSKVNIASIKVDSKKLDHLVNLVGELVTIQSKLS---KEAE 362 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 N L + + +L++ +R +P+E +F ++ R+V+DL+ LGK + Sbjct: 363 NRNSNILNSISAEFSLLINELRDYTTGLRTVPIEILFVKFQRIVKDLSTSLGKSILYHAS 422 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G T LDKS+IE++ +PL HL+RNS+DHGIE ++R + GK+ G + LSA G ++ + Sbjct: 423 GGDTVLDKSIIEKLNEPLVHLIRNSIDHGIESAQERESLGKDPKGIIKLSACQSGDSVIV 482 Query: 417 EVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 + DDG GL++ +IL KA + + ++ +S+ +V LIF PGFSTA VTD+SGRGV Sbjct: 483 IIEDDGRGLDKNKILKKAIERNIISDSVAKTLSEIDVYNLIFEPGFSTASSVTDISGRGV 542 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK+ ++ + GHV ++S+ G T I+++ PLTLAI++G VRV DE FI+PL+ V Sbjct: 543 GMDVVKKQVESLRGHVVLESEFGKYTRIKLIFPLTLAIIEGWLVRVKDEHFIVPLSNVES 602 Query: 534 SLQPRE--ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRR 591 L+ + + + + V+ RG + + L + F V+ K+ + Q VV++ + + Sbjct: 603 CLESNKLISQMDGIETKSNVMNYRGSMISYIRLREFFQVSSEKSLSEQ--VVVVNTNSGK 660 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 ++VD+++GQHQ V+K L Y +V G+S ATILGDGS+AL+VD+ A+ + + Sbjct: 661 MGIVVDEVLGQHQTVIKALGKIYSRVEGVSGATILGDGSLALVVDIDAITKLIK 714 >UniRef50_C6XBY4 CheA signal transduction histidine kinase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XBY4_METSD Length = 799 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 250/393 (63%), Positives = 313/393 (79%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + + E+TSIRV VEKVDQLINLVGELVITQ+ML +R S+LDPV H DL+ S+GQL RN Sbjct: 399 EKPAAAETTSIRVGVEKVDQLINLVGELVITQAMLEERISKLDPVTHEDLLNSLGQLTRN 458 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 RDLQESVMSIRMMPM+YVFSR+PR+VRDLA +LGK+VE G++TELDK LIERI+DP Sbjct: 459 TRDLQESVMSIRMMPMDYVFSRFPRMVRDLATRLGKKVEFVTSGAATELDKGLIERIVDP 518 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 LTHLVRNS+DHGIE+P+ R +GKN G L LSA ++GGNI IEVTDDGAGLNRERIL+K Sbjct: 519 LTHLVRNSIDHGIEVPDVRHKSGKNETGRLSLSASNRGGNIVIEVTDDGAGLNRERILSK 578 Query: 434 AASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQS 493 A GL VS+ M D +V LIFAPGFSTAEQVTDVSGRGVGMDVVKRN+ MGG ++I+S Sbjct: 579 AKQSGLPVSDTMPDSDVWQLIFAPGFSTAEQVTDVSGRGVGMDVVKRNVSAMGGVIDIRS 638 Query: 494 KQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLE 553 G GTT+ I LPLTLAILDGMSV + D ++++PLN ++E++QP+ D+ + G ++ Sbjct: 639 ALGYGTTMSISLPLTLAILDGMSVSLGDNMYVVPLNLIVETMQPQATDIKTVTGAGFMVH 698 Query: 554 VRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 VRGEYLPI+ L+ +FN T G++VI+++ G++ AL VD L+GQ QVV+K+LE+N Sbjct: 699 VRGEYLPIIPLYSLFNQPTQITNPVDGVLVIIEAEGKKAALFVDGLVGQQQVVIKSLETN 758 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINRE 646 YRKVPGIS ATI+GDGSVALI+DV + + + Sbjct: 759 YRKVPGISGATIMGDGSVALILDVPTIIKMGQN 791 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 6/292 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FFDEA+ELLA+ E LL L + PD+E LNAIFRAAHSIKGGA TFG + Sbjct: 1 MSIDMSQFYQAFFDEAEELLAEAEHLLLALDLDNPDSEDLNAIFRAAHSIKGGAATFGMT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++ENLLD+ R+ EM L + ++ FLE KD++ QL+ ++ + D + + Sbjct: 61 DMAEITHVLENLLDKIRKNEMALTGEHVDTFLEAKDVLNSQLEGHRSGADVDRDVQEEVK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L+ L+ + + + A + S +P+ + + Sbjct: 121 RKLKALSEGKPVSAAAEMAAAAAPAAASAPAAASAPAAPKPAAAAPAAPADKMRHYNIDV 180 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + D L + D V + D + + + Sbjct: 181 KALSEKDTANLEGELGLLGEVSSKRLDNGHVAFSLKTEDSEDDIISICAFIVEPEDIKIT 240 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRV------AVEKVDQLINLVGELVITQS 286 A +I V E + + L+G++ I+++ Sbjct: 241 LQSGAAAPAAAAAAPADGKHRFNIEVPELSDKDAENLKSELALLGDVSISKA 292 >UniRef50_A5N784 CheA1 n=3 Tax=Clostridium RepID=A5N784_CLOK5 Length = 674 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 199/664 (29%), Positives = 338/664 (50%), Gaps = 31/664 (4%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQ-PEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +++ E +L+ +E +L + E ++ IFR H+IKG + + + Sbjct: 8 DPMLESYIFETSDLINKLETLVLDNENSNCYCQECIDEIFRIVHTIKGSSAMMSYDYISM 67 Query: 65 TTHLMENLLDEARRGEMQ-LN-TDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H +E+LL R + L+ ++ +L L++ D ++ ++D K D I + Sbjct: 68 LAHSIEDLLYFIRENNSEDLDYKELSDLILKSVDFIKGEIDKIKIGNGVQGICDDMINEN 127 Query: 123 LRQLALEAKGETP--SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 ++ L +K + P + V + + +++ + E Sbjct: 128 IKFLEKLSKCDLPKKDNIDSQKVDKSDIDKKDTLYKAVIFFEDNCQMENLRAYTVVETFK 187 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITA-------------------VLCFVIEADQI 221 V + I E+ +L V Sbjct: 188 EFCHELYYVPEDIIDNDNTCNLIREEGFKLFIKCDKSYEEVEQILKHTVLLKSVKLIKME 247 Query: 222 TFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL 281 E V + L P + +SN I V VEK+D+L++LV E+ Sbjct: 248 EDEEVHPVSRPKENVDLNGHVPYQPLPGKQERIPDKSNVQNFINVKVEKLDKLMDLVEEM 307 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVR 341 VI +SM+ + + +L + + S QL++ +++Q++VMS+RM+P+ +F + R+V Sbjct: 308 VIAESMVTE-NPDLKGLKLDNFRKSARQLRKITKEIQDTVMSVRMVPVYGIFHKMNRIVH 366 Query: 342 DLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVG 401 D+ KL K+V+L +G TE+DK++IE I DP+ HLVRNS+DHGIE E R + GK+ +G Sbjct: 367 DMNKKLNKKVKLKFIGEDTEVDKNIIEHISDPIMHLVRNSIDHGIESAECRRSLGKSEIG 426 Query: 402 NLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLT--VSENMSDDEVAMLIFAPGF 459 N+IL A++Q + + + DDGAG N+E IL KA +GL ++ MSD E+ LIF PGF Sbjct: 427 NIILEAKNQDNYVVVMIKDDGAGFNKEIILKKAREKGLLKKSADEMSDKEIYDLIFIPGF 486 Query: 460 STAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRV 519 S E +T+ SGRGVGMDVV +NI+++GG V +QSK GT I I +P TLAI+DG++VRV Sbjct: 487 SIKENITEFSGRGVGMDVVMKNIKEIGGIVTVQSKDNEGTLITIKIPSTLAIIDGINVRV 546 Query: 520 ADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ 579 D + +P+ + + +P+ D+ + E ++ VR + P++ + K++ + E Sbjct: 547 GDYYYTIPVTVITKFFRPKADDIFHIEKNE-MIMVREKCCPVIRIHKLYGIETNIKELAD 605 Query: 580 GIVVILQSGGRRYALLVDQLIGQHQVVVKNLESN---YRKVPGISAATILGDGSVALIVD 636 GI+V++++ + + D+L+GQ QVVVK L + + GIS T+LGDGS++LI++ Sbjct: 606 GIIVMVKNEDKFVCIFADELLGQQQVVVKPLPDYVKRIKNIKGISGCTVLGDGSMSLILN 665 Query: 637 VSAL 640 + L Sbjct: 666 IGEL 669 >UniRef50_B4RAP5 Chemotaxis histidine kinase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RAP5_PHEZH Length = 1001 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 210/715 (29%), Positives = 326/715 (45%), Gaps = 69/715 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + D F E E L ++ L+ + + D E L+ IFR H+IKG G G LQ Sbjct: 8 LDDLVSDFIAETREGLEALDSELVRFEQQPDDPETLSGIFRLIHTIKGTCGFLGLMRLQT 67 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H EN+L R G + + ++ L+T D+++ +DA + + L Sbjct: 68 VAHAAENVLGGFRDGVVPVTPTAVSAVLDTVDLIRSLVDALASTGAEPEGDDSALIGRLE 127 Query: 125 QLALEAKGETPSAVTRL--------------------SVVAKSEPQDEQSRSQSPRRIIL 164 + A G+ P+A + + +R + R+ Sbjct: 128 AVMETAAGDEPAAAAPTAEAPQPAAKDARSLIEQLGGDATLDAAAEMSLARLRDDARLGG 187 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPG---------------------DI 203 +A LL L + + +D+L+ L Sbjct: 188 LFARADTDRLLAAVRDGLCGIARKGEASDALARALAQVADGAVDAGAVGAVFDVAAAALA 247 Query: 204 AEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNES-- 261 + A + + E + + A AP E + + Sbjct: 248 DLEVDAAAIAALRSLACPPPEPRAEADPEPALAEAEPEASSAPDPEPALEASPAPVAATA 307 Query: 262 ------------------TSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 +IRV+V+ ++ L+ +V ELV+ ++ L Q L Sbjct: 308 PAARSAPPAAGGEAAGPAQTIRVSVDALEHLMTVVSELVLIRNQLIQ---TLRLEPESPF 364 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 + +L + +LQE VM+ RM P+ +++ PRLVRDLA LGK ++L ++G TELD Sbjct: 365 AAPLNRLNQVTSELQEGVMTTRMQPISGAWAKLPRLVRDLAQDLGKSIDLVMLGQETELD 424 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 + ++E I DPLTH++RN+ DHG+E P +R AAGK G + L A H+GG I IEV DDG Sbjct: 425 RQVLELIKDPLTHMIRNAADHGLETPAERRAAGKPETGRITLQARHEGGAIVIEVADDGR 484 Query: 424 GLNRERILAKAASQGLTVS---ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 GL+ E+I AKA + GL E MSD + LIF PGFSTA QVT VSGRGVGMDVV+ Sbjct: 485 GLSAEKIRAKALASGLITPTQAEQMSDADARQLIFLPGFSTASQVTAVSGRGVGMDVVRT 544 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 NI+K+GG +E+ + G GT I +PLTL I+ + V E F +P +AV+E + A Sbjct: 545 NIEKIGGAIEVGATDGGGTRFTIRIPLTLTIVSALIVECCGERFAMPQSAVVELVSASGA 604 Query: 541 DLHPLA--GGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 H + G VL +R LP+V L + + + + +++ + G + ++VD+ Sbjct: 605 SGHAIEYIDGSAVLRLRDRLLPLVSLQSLLGLEPVGEPSNETCILVARVGAFTFGVIVDR 664 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 + ++VVK + + R + S ATILGDGSV LI+D + + + A Sbjct: 665 VFDTEEIVVKPVATVLRHLKLYSGATILGDGSVILILDPKGISLEAGAGQTGSLA 719 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 4/88 (4%) Query: 515 MSVRVADEVF-ILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGA 573 + R A+E L V + + + G V++ RG +P++ + A A Sbjct: 738 LVFRAANETLKAARLATVSRIEELAADQIERVDGR-AVVQYRGRLMPVLGVDA--QPAAA 794 Query: 574 KTEATQGIVVILQSGGRRYALLVDQLIG 601 + +++ R LLVD+++ Sbjct: 795 WEGEGRRPLLVFAQEDRAVGLLVDEIVD 822 >UniRef50_D2L8C2 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L8C2_9DELT Length = 677 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 228/685 (33%), Positives = 359/685 (52%), Gaps = 48/685 (7%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 D Q F +EA ELL +E +L L+ + D+++++ +FRA H+IKG FGF + T Sbjct: 2 DHVQAFREEALELLETVEHTVLELEADPQDSDKVDKLFRAMHTIKGSGAMFGFDEVARFT 61 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E + D+ R G++ + D+++L L +D + L + E A + D + LR L Sbjct: 62 HQVETVWDQVRSGKLTADKDLLDLTLLCRDHILGLLS--RGEDEASAEASDGLSGRLRSL 119 Query: 127 AL-EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A EA G+ +++ + R + L + L E+G L Sbjct: 120 AGLEADGDPAGPAPKVAADGPRPVPHAATWWLRYRPKADTYLSGQDPLGLLAEVGALGQA 179 Query: 186 TDVVKGADS--------------LSAILPGDIAEDDITAVLCFVIEADQITFETV----- 226 VV + +L G ED + V FV + + + Sbjct: 180 RAVVHAEATPPLEALDPEAVTVWWDVLLVGGAGEDALRDVFVFVEDEHDVLVSRLAKTAL 239 Query: 227 -----------------EVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 E + ++T +LAA + + + + + SIRV Sbjct: 240 RATDLDEVQALLAASAFEDAHALATDLDRRLAARVSRRAKPRPKPKDAGDGAASIRVEAS 299 Query: 270 KVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPM 329 ++D+L++LVGEL I QS L++R++ + +L+R A L++ + +RM+P+ Sbjct: 300 RLDRLVDLVGELAIIQSRLSERAAAGVDPAGRAI---AEELERVAARLRDETLGLRMVPI 356 Query: 330 EYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELP 389 ++ RLVRDLAG+LGK+ G TELDK +++++ DPL H++RNSLDHG+E P Sbjct: 357 GGLYGTLRRLVRDLAGELGKEAAFVGEGGDTELDKHVMDQLKDPLVHILRNSLDHGLESP 416 Query: 390 EKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDD 448 EKRLAAGK + G + L A+H GG + I +TDDG G++ ER+ KA +GL E + Sbjct: 417 EKRLAAGKPAQGTVRLQADHVGGEVRIVITDDGGGVDLERVRQKALEKGLLAPGEEADER 476 Query: 449 EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLT 508 + +F PGFSTA++V+ VSGRGVGMDVVKRNI+++GG V ++S+ G GTT+ + LPLT Sbjct: 477 TILNCLFCPGFSTAKEVSSVSGRGVGMDVVKRNIEELGGRVSLESRSGLGTTLTVRLPLT 536 Query: 509 LAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVF 568 LAI+DG+ VRV +E +I+PL A L+ P G V+ R + P + L ++F Sbjct: 537 LAIIDGLQVRVGNEDYIIPLVAARACLERFLDADPPAVG---VVTWRDKMTPCLSLRRIF 593 Query: 569 NVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGD 628 VAG + V+++ +G L VD ++GQ Q V+K L YR+V +S T+ GD Sbjct: 594 GVAGPSPRYER--VIMVAAGDAEVGLAVDVVVGQRQAVIKKLSDVYRRVECVSGTTVNGD 651 Query: 629 GSVALIVDVSALQAINREQRMANTA 653 G+++LI+DV+ L A+ A Sbjct: 652 GTISLILDVARLARYAGTLGEAHCA 676 >UniRef50_Q72AN2 Chemotaxis protein CheA n=3 Tax=Desulfovibrio vulgaris RepID=Q72AN2_DESVH Length = 697 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 207/706 (29%), Positives = 321/706 (45%), Gaps = 62/706 (8%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +D + F DEA ELL DME L L+ D + +FR H++KG FG++ Sbjct: 1 MIDRPAVMRLFGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKGSGAMFGYTE 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLD-AYKQSQEPDAASFDYIC 120 H +E++ D R G + L ++++ L LE KD +Q L+ + D + Sbjct: 61 AARVAHALEDVFDRVRHGRLPLTSELLGLCLEAKDHLQTLLEGDPADVPVAVREASDALM 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKS-------------------------EPQDEQSR 155 + + + + D R Sbjct: 121 LRIAAFEHDEADVDDGQAVHAAKPYDTGVPEHMTISGDATGEAEVCLWVRLTPADDWMWR 180 Query: 156 SQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFV 215 P R++ S G +++ V +L G ++ D + ++ Sbjct: 181 GLDPLRLLDSFRGYGPFEVVPVFADGGLEHVGEVPFPVRWEGVLTGRVSADVLRQDYAWL 240 Query: 216 IEADQITFETVEVSPKISTPPVL----------KLAAEQAPTGRVEREKTTRSNESTS-- 263 ++++ ++ ++ L A A +ERE + S Sbjct: 241 LDSENLSIMSLGKRSDCPPVRALLSAAVGGRVNDPLALMAAARAMEREDICNCMDVQSVA 300 Query: 264 -------------IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQL 310 IRV K+D+L+ VGELVI QS L+Q + ++ L Sbjct: 301 SEVAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLVRGVPDDAMREVAEG---L 357 Query: 311 QRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERI 370 +R A L++S MS+RM+PM F + RLVRDLA +LGK+V G TELDK+LI+++ Sbjct: 358 ERLAGSLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTELDKTLIDQL 417 Query: 371 IDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERI 430 DPL HL+RN++DHGIE PE RLA GK G + L A H GG + I V+DDGAG++ E++ Sbjct: 418 RDPLLHLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDGAGVDLEKV 477 Query: 431 LAKAASQGLTVSENMSDDE-VAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 +A + GL E D + L++ PGF+TA V+++SGRGVGMDVV I + G + Sbjct: 478 RLRAVAMGLIPPETEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVHSAIAALRGSL 537 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESL-QPREADLHPLAGG 548 ++++ G GTT I LPLTLAI+DGM V V + +I+PL V L + + + + Sbjct: 538 DMETTPGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMVEACLERFVDGAVRTVE-- 595 Query: 549 ERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 +E RG +P V L + V G + + V++ G VD ++G Q V+K Sbjct: 596 --CIEYRGRLIPCVSLRLLLGVPGEQPGYER--VIVAGKEGHEVGFAVDAVVGLQQAVIK 651 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 + + R V IS T+ DG ++LI+DV L A Sbjct: 652 GVGNLCRNVAWISGTTVDADGGISLILDVVQLIRFAVGSVGPEAHA 697 >UniRef50_C7I0R5 CheA signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I0R5_THIIN Length = 674 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 193/679 (28%), Positives = 318/679 (46%), Gaps = 44/679 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +D F E+ ELL+ + LL L+ + D+E L+AIFRA H++KGGAG + + Sbjct: 2 DNDILLEFLAESRELLSQAQDQLLRLESQPDDSEALSAIFRAFHTLKGGAGFLEAQNMVD 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+L D+ R G+++ +I+ L D++ LD + + P + ++ Sbjct: 62 WCHHLEDLFDKMRSGKLRATAPMIDAILRATDVITAMLDDMARGENPPPGP-AALGADIQ 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQ----------------SRSQSPRRIILSRLK 168 + P + A P + S R Sbjct: 121 AFSRGETPALPEVAKDATNKAAKSPPAAEVVREGLWVTQTERDSGSTGLFAERRTADAEP 180 Query: 169 AGEVDLLEEELGHLTTLTDVVKGADSL------------------SAILPGDIAEDDITA 210 G T + + D L ++ +I +D+ Sbjct: 181 TSPASASASANGDSITQDEFERVLDDLYGAGQAPGAAPAGAVAAPASRTADEITQDEFER 240 Query: 211 VLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEK 270 VL + A + +P+++ K A + P R + E TSIRV + Sbjct: 241 VLDQIHGAGHAPGQASAPAPEVAQKSEQKAAQKAEPAAPSARSANGSAAEETSIRVDSTR 300 Query: 271 VDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPME 330 +DQ +N VGELV+ ++ L+ + + L + DLQ +VM +RM P + Sbjct: 301 LDQAMNQVGELVLLRNRLSAAVARMAQ-EDEALARLARETDLAVNDLQNTVMRLRMQPCK 359 Query: 331 YVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPE 390 +F PR+VRD + LGK+V L + G E+DK++++ + PL HLVRN+LDHGIE PE Sbjct: 360 RLFQSLPRVVRDASRSLGKKVRLDIEGEDVEIDKTVVDALSGPLIHLVRNALDHGIEEPE 419 Query: 391 KRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSD 447 R AGK L + A H G + I+V DDG G+N ++I+ A S+G+ ++ +S+ Sbjct: 420 VRRQAGKPEEAVLRVLARHLGDKVQIQVGDDGRGMNAQKIMQHAISKGVITAQEAARLSE 479 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 E+ LIF PGFST EQV+++SGRGVGMDVV+ + + G ++I + G G+T+ + LPL Sbjct: 480 REMLELIFLPGFSTKEQVSELSGRGVGMDVVRSTVASLRGRIDIDTTLGKGSTLTLELPL 539 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 T+A+L + R+ E + LP+ A+ L +H ++G V +P ++L ++ Sbjct: 540 TMAVLPVLYFRLRRETYALPVAAIENLLAIDPEQVHSISGRLMVQVDGNRVVPYIDLGQL 599 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 + Q ++++ G L+V + +G VVK L+ ATI G Sbjct: 600 LQDRPIELLKDQSEGILIEQG----LLVVSEAMGTEDSVVKPLD-ISTNDTLYQGATISG 654 Query: 628 DGSVALIVDVSALQAINRE 646 +G V LI+D +AL + R+ Sbjct: 655 NGEVVLILDGAALARVQRK 673 >UniRef50_Q2BJR4 CheA signal transduction histidine kinase n=5 Tax=Proteobacteria RepID=Q2BJR4_9GAMM Length = 815 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 219/579 (37%), Positives = 336/579 (58%), Gaps = 28/579 (4%) Query: 98 MQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ 157 ++E + + D + + + + + + + Sbjct: 224 IEEIFEWVE-----DECDLSIVQKEVEAEKPAVAESQQTDSREVREILFKPDASLLATGN 278 Query: 158 SPRRIILSRLKAGEVDLLEEELG-HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI 216 P + + GE+++ + G D K S L D E++IT + +V Sbjct: 279 EPSFLFQALADLGELEIEVDSSGLPDLDQLDPEKLLLSWRFKLRSDCPEEEITEIFEWVE 338 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAP-----------------TGRVEREKTTRSN 259 + ++T + + A + P + K + Sbjct: 339 DECELTIQGASKVSTQPAETETQPVASEQPVEAASDKPATPAAVQSTSPAASPRKAKPAA 398 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV----NHGDLITSMGQLQRNAR 315 ES+SIRV +K+D LIN VGELVITQ+ML Q EL + L + + QL+RN R Sbjct: 399 ESSSIRVETDKIDALINRVGELVITQAMLGQVGDELSDLVSGSEIERLQSGLEQLERNTR 458 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 DLQE VM +RM+P+ +VF+R+PRLV D++GKLGK+VEL + G TE+DK+++E+I DP+ Sbjct: 459 DLQEDVMRVRMLPISFVFNRFPRLVHDVSGKLGKKVELIITGEQTEIDKTVMEKIGDPMV 518 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RNSLDHG+E PE+R+AAGK G + L A HQGG I I++ DDG GLN E+I KA Sbjct: 519 HLIRNSLDHGLESPEERVAAGKPETGKVQLDAYHQGGFIIIDIIDDGRGLNTEKIYQKAL 578 Query: 436 SQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSK 494 +GL ++ +SD E+ LIF PGFSTAE V+D+SGRGVGMDVV+RNI+ +GGHV ++S+ Sbjct: 579 EKGLVTTDQNLSDSEINELIFKPGFSTAEAVSDLSGRGVGMDVVRRNIESLGGHVRVKSE 638 Query: 495 QGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEV 554 G G+T + LPLTLAILDG +RV +E +I+PL +++E++ ++ L P+AG ++L Sbjct: 639 PGHGSTFTVSLPLTLAILDGQLIRVHNETYIVPLISIVETILADKSSLSPIAGENKLLHF 698 Query: 555 RGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNY 614 R EY+P++ L +F + + + ++ I+++GG++ L+VD+L GQ QVV+K+LE N+ Sbjct: 699 RDEYIPLINLRSLFKLPMQEEQMESCLIAIVENGGQKVGLIVDELFGQQQVVIKSLEVNF 758 Query: 615 RKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 +++ G + ATILGDGSVALI+D++ L + A TA Sbjct: 759 KRIEGFAGATILGDGSVALILDIAGLMKRGLDHETARTA 797 Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 82/309 (26%), Positives = 132/309 (42%), Gaps = 6/309 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S F TF +E+ E L ME LL L ++ D E +N IFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDLSQFIGTFLEESYEGLEVMESSLLAL--DSADEETINTIFRAAHSIKGGAGTFGFS 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH++E LLDE R G+ ++ ++NL LE+ D ++ L+A + DA + + Sbjct: 59 EVADFTHVVETLLDEMRSGKQEVTPPLVNLLLESVDCIKMLLEATQDGPAADANQINQVQ 118 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSE---PQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + L++ + S+ + VA +E Q + + L++G Sbjct: 119 ERLQKALDGDVSDNASSGGTETSVATAEVSVSSPSQLAWEIEFKPHPGLLQSGHEPAFMF 178 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 E +VV + + D + I L + + E + + Sbjct: 179 EALQDLGELNVVAKLKKVPDLSSLDPEQIFIKWQLNLISNCSKEEIEEIFEWVEDECDLS 238 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVE-KVDQLINLVGELVITQSMLAQRSSELD 296 + +A V + T S E I + + N L + L + E+D Sbjct: 239 IVQKEVEAEKPAVAESQQTDSREVREILFKPDASLLATGNEPSFLFQALADLGELEIEVD 298 Query: 297 PVNHGDLIT 305 DL Sbjct: 299 SSGLPDLDQ 307 >UniRef50_A9BRE0 CheA signal transduction histidine kinase n=7 Tax=Burkholderiales RepID=A9BRE0_DELAS Length = 732 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 260/528 (49%), Positives = 335/528 (63%) Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + +A+++L + G + S + + + A E + Sbjct: 204 EMAEAIKELFRDIPGLGRIEDLACDQPQSRLFDVQTSSTDDDLLDLFAFHVAKEQVRITA 263 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 V + D +A + EA + + Sbjct: 264 AGAPAEAAPAAVAAQAPAAEEHAHDPDAALASAAIPPADEAYGFFNGAPGMPQADGAQAI 323 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 A P + + ESTSIRV+V KVDQLINLVGELVITQ+MLAQ S LD Sbjct: 324 QPAGAVAKPAAKTAAQTQQAQMESTSIRVSVAKVDQLINLVGELVITQAMLAQNSHGLDA 383 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + L+ + L RN RDLQESVMSIRM+PM VFSR+PR++RDLAGKLGK+++L +G Sbjct: 384 SAYQQLLAGLADLDRNTRDLQESVMSIRMIPMSTVFSRFPRMLRDLAGKLGKKIDLITLG 443 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 +TELDK L+E+I DPLTHLVRNS+DHGIE+PE RLAAGK+ G L L+A HQGG+I IE Sbjct: 444 EATELDKGLVEKITDPLTHLVRNSVDHGIEMPEDRLAAGKSEHGTLTLAASHQGGSIVIE 503 Query: 418 VTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 V DDG G+NRERIL KA +G+ VS+NM D EV LIFAPGFSTA+ VTDVSGRGVGMDV Sbjct: 504 VRDDGRGMNRERILQKARERGMDVSDNMPDQEVWQLIFAPGFSTADVVTDVSGRGVGMDV 563 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VKRNI +GG VEI+S QG G + + LPLTLAI+DGMSV V+DEV+ILPL++V+ES Sbjct: 564 VKRNIAALGGSVEIESTQGKGMRVAVRLPLTLAIMDGMSVGVSDEVYILPLSSVVESFLV 623 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVD 597 + D++ +A G ++++VR EY+P+ L K F V + T + I+V+++S G R ALLVD Sbjct: 624 KAEDVNTVANGTQLVKVRDEYMPVFALEKTFRVPRSDTSQSSNIMVVVESDGSRVALLVD 683 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 +L+GQHQVVVKNLESNYRKVP +S ATILGDG+VALI+D AL R Sbjct: 684 ELLGQHQVVVKNLESNYRKVPNVSGATILGDGTVALILDTGALVRRAR 731 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 76/125 (60%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+S FYQ FF+EA E L MEQ LL L A + E+LN IFR AHSIKGGA TFGF+ + Sbjct: 15 FDLSQFYQIFFEEAAENLDQMEQMLLNLDLSAANDEELNGIFRCAHSIKGGAATFGFADV 74 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 E TH ME+LLD RR E+ +++++ LE+ D + L ++ E +A S + Sbjct: 75 TELTHRMESLLDRLRRHEITPIPEMVDVLLESADASRSLLARHQAGNEGEALSTTDLVAR 134 Query: 123 LRQLA 127 + LA Sbjct: 135 IETLA 139 >UniRef50_Q01VJ7 CheA signal transduction histidine kinase n=2 Tax=Acidobacteria RepID=Q01VJ7_SOLUE Length = 676 Score = 530 bits (1365), Expect = e-149, Method: Composition-based stats. Identities = 203/639 (31%), Positives = 321/639 (50%), Gaps = 69/639 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F E+ E LA++E +L L+ E ++E LNA+FR H+IKG AG +Q+ Sbjct: 98 DPELMSDFIVESREHLANVETQVLTLEREPTNSESLNAVFRGFHTIKGLAGFLELWEIQK 157 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E +LD AR + + + D++ E D ++ L Sbjct: 158 LAHEVETVLDRARNSQWTITGN-------AIDVILESADYLRR-----------WLAHLE 199 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + P + + L + E D L L Sbjct: 200 SVLQHRASDPP--------------------QRDEALLSRIVLLSSEPDAGAPGLDALAM 239 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + ++ + Sbjct: 240 AVTSIPAPGEV-----------------------------PSLIAEPPAAALQPAPPVPA 270 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + T E+ +++V K+D L+++ GE+VI +S L + EL + + L Sbjct: 271 ESSAPTPPPNQTGRRETMAVKVDTAKLDYLVDMAGEMVIAES-LVRHDQELSAIKNPLLH 329 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + + R +LQ++ M++R++PM +F R RLVRDL+ + GKQVE+ G ELD+ Sbjct: 330 RKIAHMTRITAELQKTAMAMRLVPMGPLFRRMARLVRDLSRQFGKQVEMETQGDDIELDR 389 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++E + DPL H+VRN+LDHG+E P +R GK + L+L A+HQ G + IE+TDDG G Sbjct: 390 TIVEELSDPLMHMVRNALDHGVEFPSEREKTGKPATARLLLKAQHQAGQVVIEITDDGRG 449 Query: 425 LNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 L+R +IL +A +GL + + ++D+EV LIF PGF+TA QVT+VSGRGVGMDVV+R+I+ Sbjct: 450 LDRSKILDRAVQKGLVRASDTLTDNEVFNLIFEPGFTTAAQVTNVSGRGVGMDVVRRHIE 509 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 K+ G +EI+S G G T + LPLTLAI+DG+ V V E +I+PL AV E +P + Sbjct: 510 KLRGRIEIRSSLGRGATFLLKLPLTLAIIDGLVVTVGGERYIVPLFAVREMFRPTAETIW 569 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 + + VRG LP+V L++ F V + QG++V+ G+++ +LVD LIG+ Sbjct: 570 TVQQRAEMALVRGTLLPVVRLYRAFGVTPRSEDPCQGVLVVADVEGQQFCILVDDLIGKQ 629 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 +VV+K L ++ V GI+ ILGDG V LI+D+ + Sbjct: 630 EVVIKTLGDTFKNVSGIAGGAILGDGRVGLILDLDRIFK 668 >UniRef50_C7NUW2 CheA signal transduction histidine kinase n=2 Tax=Halobacteriaceae RepID=C7NUW2_HALUD Length = 670 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 194/676 (28%), Positives = 328/676 (48%), Gaps = 47/676 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F E++E + ++ LL L+ + D +++IFR AH++KG G GF + Sbjct: 2 DEQYLDAFIRESEEAITELNNSLLELESDPSDQAAMDSIFRTAHTLKGNFGAMGFDDASD 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD------Y 118 H +E+LLD R+G+M + +I++L D ++ + + + EP A + D Sbjct: 62 LAHAIEDLLDAIRQGDMDVTPEIMDLVFAGVDDIEAIVTEIEANGEPSADTADRVEDIRA 121 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + + A A + S+ + V A +E S IL R+ E + Sbjct: 122 VMEDGPDAAGAASDDGRSSGSDGDVDAGAEGDTSASGPSIDVEPILDRVDVPEPESGTVT 181 Query: 179 LGHLT-------------TLTDVVKGADSLSAILPGDIAEDDI-TAVLCFVIEADQITFE 224 L + L + D ++ D E+ + AD+ T Sbjct: 182 LADVDIGGGDMQGVDAMLALDAIEDALDVVATDPSTDEIENGVFDETFAVFAAADESTVR 241 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN-----------------ESTSIRVA 267 ++ +E E + E S+RV Sbjct: 242 AAVDDVGPVESATVQDVSEAVAAADTADETGATDDAGTSASTSSSASETAVDEIKSVRVD 301 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 V+++D L LV +LV ++ L + + + N ++ +L + LQ +VM +R++ Sbjct: 302 VDQLDDLHGLVEQLVTSRIKLRRAA---EQNNVDSTGETLNELDKITASLQNTVMDMRLI 358 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 P+ V ++PRLVRDL+ LGK+++ ++ G ELD++++ I DPL H++RN++DHGIE Sbjct: 359 PLGKVVGKFPRLVRDLSRDLGKEIDFSIEGEDIELDRTILTEISDPLMHILRNAVDHGIE 418 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN--- 444 P +R GK+ G++ L A + ++ I V DDGAGL+ E I +A QG+ ++ Sbjct: 419 PPAERERKGKSREGSIELRARRERDHVVISVEDDGAGLDVEAIREQARKQGIRSADELDR 478 Query: 445 MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRIL 504 M D + L F PGFSTAE+VT SGRGVGMDVV + ++ G V ++S+ GTT+ + Sbjct: 479 MDDSAIYDLTFHPGFSTAEEVTGTSGRGVGMDVVHETVSQLDGSVNVESEPDEGTTVSLR 538 Query: 505 LPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVEL 564 LP+T+AI+ + ++V DE + +P+ V E EA G V++ E PI+ L Sbjct: 539 LPVTMAIVKVLFIQVGDEQYGIPIKNVDEITDAGEAREI---NGNEVIKHNDEIYPIIHL 595 Query: 565 WKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAAT 624 + F+V G +T G+++ ++ R+ AL D++ Q +VVVK LE PG+S Sbjct: 596 DEAFDVPGERTNGD-GMLIRVRESERKVALHCDEVNSQEEVVVKPLEGLLSGTPGLSGTA 654 Query: 625 ILGDGSVALIVDVSAL 640 ++GDG++ I+DV L Sbjct: 655 VIGDGNIVHILDVVTL 670 >UniRef50_A4VRH0 Probable component of chemotactic signal transduction system n=2 Tax=Bacteria RepID=A4VRH0_PSEU5 Length = 2444 Score = 529 bits (1363), Expect = e-148, Method: Composition-based stats. Identities = 184/647 (28%), Positives = 298/647 (46%), Gaps = 13/647 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ F +EAD+LL +ME L DA L + R H++KGGA G + L Sbjct: 1655 AEILDIFVEEADDLLEEMESALGRWDAGREDAAPLADMLRVLHTLKGGARLAGQTALGNM 1714 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H +E L EA++ + + D + + ++ + S D+A Y + Sbjct: 1715 AHDLEQRLSEAQQQGAPWPDSLFLDVQQGYDALLKDVEQLRDSLASDSAEPLYSEPQHAE 1774 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 L ET S + + S+ +E Sbjct: 1775 LQ-----ETESPLPSEPLTLPQPIVAASSQPAPSAAPAKVLPFIRRAQQAAQEAAARRAP 1829 Query: 186 TDVVKGADSLSAILPGDIAEDDI--TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 ++VK L L E I V V + E ++ Sbjct: 1830 QELVKVPAELLEGLVNLAGETSIFRGRVEQQVSDVGFTLGEMEATIERVRDQLRRLDTET 1889 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 QA + + R+ + +++ QL L L + S L L + D Sbjct: 1890 QAQILSRYQAEAERAGYDDFDPLEMDRHSQLQQLSRALFESASDLLDLKETL-AARNRDA 1948 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 T + Q R +LQE +M RM+P E + R R+VR +AG+LGKQVE + ++ E+D Sbjct: 1949 ETLLLQQARVNTELQEGLMRTRMVPFERLVPRLRRIVRQVAGELGKQVEFLVGNATGEMD 2008 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 +S++ERI+ PL H++RN++DHGIE E+R AAGK+ G + L +GG+I + +TDDG Sbjct: 2009 RSVLERIVAPLEHMLRNAVDHGIESVERRRAAGKSEQGTIRLDLAREGGDIVLTLTDDGG 2068 Query: 424 GLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 G+N E + KA +GL +++ +S+ E+ I GFSTAE+VT +SGRGVGMDVV + Sbjct: 2069 GINLEAVRRKAIERGLMSADSGLSEHEILQFILEAGFSTAERVTQISGRGVGMDVVHSEV 2128 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +++GG + I+S G GT I LP T+++ + V ++++ +PLN + ++ +L Sbjct: 2129 KQLGGSMSIESTLGQGTRFLIRLPFTVSVNRALMVYSGEDLYAIPLNTIEGIVRVSPYEL 2188 Query: 543 HPLAG-GERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVDQ 598 E G+ + L + N ++ V++++S A+ VD Sbjct: 2189 EAYYQPDAPRFEYAGQAYELRYLGDLLNNGQKPKLVGQSLPLPVILVRSKEHSVAVQVDS 2248 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 L G ++VVK+L + V GIS ATILGDG V +I+D+ A + Sbjct: 2249 LAGSREIVVKSLGPQFAGVHGISGATILGDGRVVVILDLLATIRVLH 2295 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 89/259 (34%), Gaps = 5/259 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E +L+ L + ++ +L A+ R H++KGGA + + Sbjct: 1507 DPELVEIFLEEGFDLIESAAGGLQRWMADVDNSFELEALQRDLHTLKGGARMADIREIGD 1566 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G + ++++ L +D + E L+A + + D + + +R Sbjct: 1567 LAHELEFLYEGLCAGSYRASSELFGLLQACQDRLAEMLEAVRAHNPIPSG--DALIETIR 1624 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + + + V K+ +D Q +++ I ++ +E LG Sbjct: 1625 RFRNNPEEQLSIPSS---VSLKAAQEDAQQSAEAEILDIFVEEADDLLEEMESALGRWDA 1681 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + +L + A + E + + P Q Sbjct: 1682 GREDAAPLADMLRVLHTLKGGARLAGQTALGNMAHDLEQRLSEAQQQGAPWPDSLFLDVQ 1741 Query: 245 APTGRVEREKTTRSNESTS 263 + ++ + S Sbjct: 1742 QGYDALLKDVEQLRDSLAS 1760 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 101/348 (29%), Gaps = 25/348 (7%) Query: 3 MDIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D+ + + F DEA +L+ Q L + + L+A+ R H++KGGA Sbjct: 1261 DDLDHEMVEIFLDEAVDLMESAGQALDRWLADPANQMALSALLRDLHTLKGGARMASIRP 1320 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDI-------------------MQEQL 102 + + H +E+L + G + ++ L + D + E + Sbjct: 1321 IGDLAHELESLYEGLSDGRYVHSVELATLLQRSHDHLALQLEQLQRQLPMSCADTLIESM 1380 Query: 103 DAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRI 162 A++Q P + D + +A E V P E Sbjct: 1381 RAFRQGAFPAFEAEDVVAEAQPAQRNEPHTFEEPLEGAFDAVPDQPPVMEVIDLPLADVD 1440 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 + E E++ + L D A EA Sbjct: 1441 ESFTSEEAEAVSPLEDVEATEASFSEAQDELELELPEIEDAPASFEVAADAPRAEAVDRQ 1500 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL-----INL 277 E V+ P++ + + + + S + + L + Sbjct: 1501 PELVDRDPELVEIFLEEGFDLIESAAGGLQRWMADVDNSFELEALQRDLHTLKGGARMAD 1560 Query: 278 VGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 + E+ L L ++ G LQ L E + ++R Sbjct: 1561 IREIGDLAHELEFLYEGLCAGSYRASSELFGLLQACQDRLAEMLEAVR 1608 Score = 99.6 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 40/318 (12%), Positives = 101/318 (31%), Gaps = 5/318 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + F +EA E+L + ++L + D + L + RA H++KG ++ E Sbjct: 749 DEDLLEVFIEEAAEVLETIGEYLPRWFSDGDDKDALGEVRRAFHTLKGSGRMVRALIIGE 808 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ + + + + ++M ++ + + D + Sbjct: 809 LAWSIENLLNRVLDRTIVAGDSVRQVVRDVVELMPALVEEFAAKAQRQRDDVDRLAATAH 868 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA P V + + + + + +L +D L Sbjct: 869 ALAKGQPVALPQPVAEVVEAFVPDVDPQPAPIAEAPQAVLPENDDDALDPQL-----LEI 923 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + + D A+ V + A + ++ + + + Sbjct: 924 FRNEAESHLTTLVSFLADCAQRLPQPVTDALQRALHTLKGSAHMAGILPVAEIATPLEKM 983 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + L+NL E + +++ ++ L+ Sbjct: 984 VKEFKTNLIQMDLAEAELLHEAESLLRQGLVNLDHEPLAPIEGAPAFLAKVHALHQARLV 1043 Query: 305 TSMGQLQRNARDLQESVM 322 + + Q +A + ++ M Sbjct: 1044 EAGARQQNDAGEARDPSM 1061 Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 76/239 (31%), Gaps = 12/239 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+ L + L P +A+ RA H++KG A G + E Sbjct: 917 DPQLLEIFRNEAESHLTTLVSFLADCAQRLPQP-VTDALQRALHTLKGSAHMAGILPVAE 975 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E ++ E + +Q++ L E + ++++ L + Sbjct: 976 IATPLEKMVKEFKTNLIQMDLAEAELLHEAESLLRQGLVNLDHEPLAPIEGAPAFLAKVH 1035 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L E A + Q++ ++ P I L + ++ L E+L H Sbjct: 1036 ALHQARLVE-----------AGARQQNDAGEARDPSMIALFLSEGMDILLDAEDLLHSWR 1084 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + S + + A L + Q+ V + + + Sbjct: 1085 EHPAERQELSALLQELTTLGQGAKMADLPQMEALCQVLLRLYAVVEEGRLAVSERFFDD 1143 Score = 63.7 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 79/286 (27%), Gaps = 6/286 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F E ++L D E L + + ++L+A+ + ++ GA ++ Sbjct: 1058 DPSMIALFLSEGMDILLDAEDLLHSWREHPAERQELSALLQELTTLGQGAKMADLPQMEA 1117 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++ L G + ++ + + + +D + R Sbjct: 1118 LCQVLLRLYAVVEEGRLAVSERFFDDVERGHEALVGMMDQVAA----ALQVSEQSELLAR 1173 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 AL A+ P + + + + +Q E + E Sbjct: 1174 LEALLAEAIDPLDLAQSFAEPQVASSEPAPVTQLQAEAEAEAEAEAEAEAEAEAEAEAEA 1233 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + A++ + + E +I + + + + + A+ Sbjct: 1234 EAEAEAEAEAEAEAEAWPADPVVDESQDDLDHEMVEIFLDEAVDLMESAGQALDRWLADP 1293 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 A + R+ + + +L EL L+ Sbjct: 1294 ANQMALSALLRDLHTLKGGARM--ASIRPIGDLAHELESLYEGLSD 1337 Score = 43.3 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 34/115 (29%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E E L Q L D+ +++ H + G F ME L Sbjct: 16 EIAETLKQARQALEAFVENPQDSTRMSFCLTYVHQVHGTLQMVEFFGAALLAEEMEQLAR 75 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 G + + + + ++ + LD + ++ + LR E Sbjct: 76 ALLEGRVANQGEALEVMMQAILQLPVYLDRIQSARRDLPMVVLPLLNDLRAARGE 130 Score = 41.8 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 29/250 (11%), Positives = 70/250 (28%), Gaps = 5/250 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + D++ +Q EA L + ++ + E L + ++GG Sbjct: 430 TTDVAQIHQLVIREARNGLEQAKDAIIEFIASQWNHEHLARVPDLLTQVRGGLAMIPLER 489 Query: 62 LQETTHLMENLL-DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-QEPDAASFDYI 119 + + D+ + + ++ + ++ L+ + D Sbjct: 490 AAALLQACNSYIQDQLLARQAVPDWQSLDTLADAITSVEYYLERLSEDCGTQGDLILDVA 549 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 ++L+ L E P V +++ +P DE + + EE Sbjct: 550 EESLQNLGYSLGQEKPQPVEQIAESEMLDPLDEI---EVLPEELEVSPDTFAFAEPSEEQ 606 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 + V + L + + + + + T + + S Sbjct: 607 QPDASEPAFVSESQLLLDAAEAEPEIEAVEFEPEWTLGDSTSTDDEIVFSLPDDESSAAP 666 Query: 240 LAAEQAPTGR 249 AE A Sbjct: 667 ALAETADEEP 676 >UniRef50_B8FCJ9 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FCJ9_DESAA Length = 727 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 210/725 (28%), Positives = 355/725 (48%), Gaps = 74/725 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + + Q FF E D+LL E+ LL L+ ++ IFRA H++K G+ GF+ + Sbjct: 3 EADETLQIFFAETDDLLRSAEESLLRLENNPGSGGEVQEIFRAIHTMKSGSAMVGFTKVS 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ-EPDAASFDYICQA 122 E +HL+ENLL+ R G++ + +++ LE D +++ ++ + + E + Sbjct: 63 EYSHLLENLLERVRGGQLTVTKPLVSFLLEDIDFLRKMVERGGRGEPEAEPEVLHARKSQ 122 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQ-------------------------------D 151 L + P + D Sbjct: 123 LNRFLGMDAISEPEPKPASRSAPAPQAASQAPKAAKEKTAKAPAADGRRYYEIELKFRKD 182 Query: 152 EQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK--GADSLSAILPGDIAEDDIT 209 S Q P ++L + ++ + ++ L S + +++ Sbjct: 183 LFSWGQDPILLLLGLEEVADIVDVTADMSRLPDYESFDPYNLYISWRLTAKTKASLEEME 242 Query: 210 AVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRV------------------- 250 V FV + ++I+ E + K + Sbjct: 243 DVFMFVRDDNEISIEDITARYKEGVDIAVGERPLGEVLLERGAITKGDLDVALGKQKRLG 302 Query: 251 -------------------EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 ++E++ ++ TS+RV VEK++ L+NL E+ I S L Sbjct: 303 EILVEEGKIDSSMLEQVVGQQEESRQTYRKTSVRVDVEKINHLVNLAEEIGIGLSRLQNF 362 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 + ++ G+ + L + R+ QE V +RM P+E F R+ R+ RD A + GK+V Sbjct: 363 FGSVPDISGGEADQELENLLKVNREFQERVAQVRMFPLEGTFRRFQRIARDTAFEQGKRV 422 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 ++L+G TELDK +IE I DPL HLVRN +DHGIE PE+R AAGK G + A +G Sbjct: 423 RVSLIGVDTELDKEVIEHITDPLKHLVRNCVDHGIETPEEREAAGKLPEGVIEFRAFQKG 482 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSG 470 G I + ++DDG GL+ +RI +A + + E + + V +I PGFSTA +T +SG Sbjct: 483 GMILVRISDDGRGLDLDRIAEQAVEREIIQPGETVDNSNVLDIICQPGFSTASAITALSG 542 Query: 471 RGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNA 530 RGVGMDVV+ ++++GG ++I++++G GTT + LPLT A+L+ + ++ D +++PL Sbjct: 543 RGVGMDVVRNEVEQLGGTMQIETEKGKGTTFTLSLPLTFALLEALHIKDQDRSYLIPLWG 602 Query: 531 VMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVI-LQSGG 589 V+ + + A + GER+ RGEY+P+V L KV+ + + G +++ + + Sbjct: 603 VVGTQEYDPAHVKFFGAGERLYTFRGEYVPVVHLSKVYGIDCGEDRVGGGSILVFIDTSR 662 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 +R+ LLVD+++ HQVVVK+LESN++ V GIS ATI+GDGSVAL++D+ AL+ + + Sbjct: 663 QRFGLLVDKVLDPHQVVVKSLESNFKSVAGISGATIMGDGSVALVMDLFALEEMFFNRSS 722 Query: 650 ANTAA 654 A + A Sbjct: 723 ARSDA 727 >UniRef50_Q2ILI0 CheA signal transduction histidine kinase n=3 Tax=Anaeromyxobacter RepID=Q2ILI0_ANADE Length = 687 Score = 527 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 214/689 (31%), Positives = 337/689 (48%), Gaps = 37/689 (5%) Query: 1 MSMDISD-FYQTFFDEADELLADMEQHLLVLQPEA---PDAEQLNAIFRAAHSIKGGAGT 56 M D S F EA E + + L+ L+ PD + LN +FRAAH++KG + Sbjct: 1 MPADRSQKALAEFVSEAQETIDALGHGLMRLEAGGHEDPDPDLLNGVFRAAHTLKGLSSM 60 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 FG L H +E+LLDE R G L+ ++L LE +++ + P + Sbjct: 61 FGVERLTRLAHALEDLLDEVRLGRRGLDRAAVDLLLEAPEVLSRIVAEEAAGAPPASTDA 120 Query: 117 DY-ICQALRQLALEAKGETPSAVTRLSVVAK-----SEPQDEQSRSQSPRRIILSRLK-- 168 + LR + +++ + +E ++ + R+ + + L R+K Sbjct: 121 AARLTDRLRAGEAPPPARAADPLATVALGPEVRDILTEYEEHRLRANLAKGLALHRVKVS 180 Query: 169 -------------AGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAV--LC 213 +G + L E + L + + + + D I Sbjct: 181 FELDGFDRDLAALSGRLKRLGEVVSTLPSSDVRDPQSIAFELLFASKEPLDAIRREAGPA 240 Query: 214 FVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 +E + AA E + + S ++RV + K+D+ Sbjct: 241 AAVEVVPRVEAPPAAARAEPPRRPAGAAALSPAPEPPGDEAASLRSASQAVRVDIHKLDR 300 Query: 274 LINLVGELVITQSMLAQRSSEL-----DPVNHGDLITSMGQLQRNARDLQESVMSIRMMP 328 L+ VGELV+ ++ L + +L DP +L + L+R +LQ ++ +RM+P Sbjct: 301 LMTAVGELVLVKTSLVALAEQLRADGRDPAVAAELQRTNRTLERRLEELQAGILEVRMVP 360 Query: 329 MEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIEL 388 +E VF + R+VR LA ++GK ++L + G ELDK ++E + DPL HL+RN++DHGIE Sbjct: 361 LEQVFDKLSRMVRKLAREIGKDIDLRVSGGEVELDKLIVEDLSDPLMHLIRNAIDHGIEA 420 Query: 389 PEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---M 445 PE+R AGK +G + L A QG + I V DDGAG++ +RI A +GL + + + Sbjct: 421 PERRARAGKPPLGTVRLEASQQGNKVRIVVEDDGAGIDEDRIREVAVQRGLAAAGDVGAL 480 Query: 446 SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILL 505 S E+ LIF PGFSTA QVT +SGRGVGMDVVK N+ + G +++ +++G GT I L Sbjct: 481 SRRELMNLIFVPGFSTARQVTSLSGRGVGMDVVKSNVAALSGIIDLHTERGRGTRFEITL 540 Query: 506 PLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELW 565 P+TLAI+ + V VA + +PLN+V+E L+ R AD+ L+ E V+ VRG LP+V L Sbjct: 541 PVTLAIVRALVVWVAGRTYAVPLNSVLEILEVRAADVRTLSTRE-VVTVRGATLPLVRLS 599 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 F + GA + VV++ R + VD ++GQ VVVK L + + V GI+ AT Sbjct: 600 SFFGLPGA-GAPERLFVVVVGLAQERLGVAVDAVVGQQDVVVKPLGAVLQGVRGIAGATD 658 Query: 626 LGDGSVALIVDVSALQAINREQRMANTAA 654 LG L++DV A+ A Sbjct: 659 LGSRRTVLVLDVGAIIEDVVSGEPREAAG 687 >UniRef50_Q2CIR9 Chemotaxis histidine protein kinase n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CIR9_9RHOB Length = 650 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 222/641 (34%), Positives = 341/641 (53%), Gaps = 8/641 (1%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 QT+F+E ++LL + L L A DAE ++A+FRA HSIKGGAG F + + E Sbjct: 3 EAIRQTYFEECEDLLESLADGLAALAAGAADAETVHALFRAVHSIKGGAGAFKLAAVAEF 62 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H E +LD R ++ + ++ L D + + + A + A + + L Sbjct: 63 SHTFETVLDRLRADALEPSAPLVALLQRAADHLADLVAAAR--AGAPAPARPALHDELAA 120 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 L P + V P+ +S +P + + E L + L L L Sbjct: 121 LLGTHADAPPDELAFEPVALDLSPERPRSVRFTPTPALFA--NGHEPLHLFDALAGLAPL 178 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 ++ S A L D++ L I Sbjct: 179 D--IEADTSALAPLAAGWEAPDVSWTLETTAPEPAIRDVFAFTEGLCRLDIAEPPEPGPP 236 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 P ++RV +++VD+++N+VGEL+I Q++L+QR +L L Sbjct: 237 PPAAEAPLPPAPPPPRPTLRVDLDRVDRMMNVVGELIINQAVLSQRIDDLGLSAGASLSG 296 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + + ARDLQE VM+IR P++ +FSR R+VR+ A GK V L G+ TE+DK+ Sbjct: 297 DLEDYRALARDLQEGVMAIRAQPVKPLFSRMSRIVREAATATGKDVRLVTEGAETEIDKT 356 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +++ + DPLTH++RN++DHGIE PE+R+A GK G L L+A H+ G I +E+ DDGAGL Sbjct: 357 VVDSLADPLTHMIRNAIDHGIEPPERRVALGKPPAGTLRLTAAHRAGAILLEIADDGAGL 416 Query: 426 NRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 +R RI A A ++GL E +++D E+ L+F PGFST+ ++ +SGRGVGMDVVK I Sbjct: 417 DRPRIRAAAEARGLVSPEADLTDAEIDNLLFLPGFSTSSVISSLSGRGVGMDVVKTAIAA 476 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG V I ++ G GTT I LPLTLA+LDGM V +A + ++P+ + E+++ ADLH Sbjct: 477 LGGRVSIATRPGAGTTFSITLPLTLAVLDGMIVTIAGQTMVVPIATINETVRAAPADLHK 536 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGR-RYALLVDQLIGQH 603 L R+L +RG ++P+V+ + + A + ++++ S R AL V+++ Q Sbjct: 537 LGADGRLLRLRGRHVPVVDAAAALGLPPPRAPAEEVMLLLCDSEARGLCALAVERIWEQR 596 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 QVV+K+L VPG+SAATILGDG +A I+D AL A Sbjct: 597 QVVIKSLTGTCGHVPGLSAATILGDGRIAFILDPEALVAEA 637 >UniRef50_Q4ZZ60 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt n=6 Tax=Pseudomonas syringae group RepID=Q4ZZ60_PSEU2 Length = 1992 Score = 527 bits (1357), Expect = e-148, Method: Composition-based stats. Identities = 165/644 (25%), Positives = 298/644 (46%), Gaps = 31/644 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ + F +E +++ L Q + + ++ + R H++KGGA + + + Sbjct: 1229 DAELREVFLEEGFDIMESSGAALARWQADPHNMLEVENLLRDLHTLKGGARMVEIAPIGD 1288 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G +Q +I L +D++ + LDA + E + +++R Sbjct: 1289 LAHELETLYEGLSAGSLQPAPLMIGLLQSGQDVLADMLDAVRN--EKPLPDASLLIESIR 1346 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR--IILSRLKAGEVDLLEEELGHL 182 +LA + A V +S R + ++ A +++ L G Sbjct: 1347 RLATDEPSGAQLAAQDPEVHPESVVAVAPVAEGEVERSGPEMVKVPAEQLEDLVNLAGET 1406 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + ++ +I++ E ++ Sbjct: 1407 SIFRGRIEQQ----------------------IIDSQIALVEMETTIERMRDQLRRLDME 1444 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 Q E+ +T R + +++ QL L L + S L L D Sbjct: 1445 TQGRILSREQVQTERLGYEEFDPLEMDRHSQLQQLSRALFESASDLMDLKETL-GARARD 1503 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 T + Q R LQE +M RM+P E + R R+VR +A +L K+V + + E+ Sbjct: 1504 AETLLSQQARVNTQLQEGLMRTRMVPFERLVPRLRRVVRQVASELHKKVHFEVGNADGEM 1563 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++ER++ PL H++RN++DHG+E EKR+AAGK G++ L ++GG++ IE++DDG Sbjct: 1564 DRNVLERMVAPLEHMLRNAVDHGLESTEKRIAAGKPEQGHISLELMYEGGDMVIELSDDG 1623 Query: 423 AGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 +G++ + KA +G+ + ++SD EV I GFST+E +T +SGRGVGMDVV Sbjct: 1624 SGVDLAAVRRKAIKRGMIHPDADLSDHEVLPFILQAGFSTSEIITQISGRGVGMDVVHAE 1683 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++++GG + I S G GT RI LP+++++ + V +E + +PLN V ++ + Sbjct: 1684 VKQLGGSMVIDSVPGKGTRFRIRLPISVSVNRALMVTCGEEQYAVPLNTVDGIVRVMANE 1743 Query: 542 LH-PLAGGERVLEVRGEYLPIVELWKVFNVAGAK--TEATQGIVVILQSGGRRYALLVDQ 598 L + G + L ++ + + + V+++ + A+ VD Sbjct: 1744 LDGYYQTSPPRYQYGGRSYELRYLGELLGSSPPRLAGQLQPLPVLLVHLQDQWVAVQVDA 1803 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L G ++VVK+L + +V GIS ATILGDG V LI+D+ A Sbjct: 1804 LAGSREIVVKSLGPQFSRVQGISGATILGDGQVVLILDLMAQIR 1847 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 55/377 (14%), Positives = 123/377 (32%), Gaps = 56/377 (14%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA ++L Q L + + L ++ R H++KGGA + + + Sbjct: 1086 DDEIVEIFLEEAVDILDSAGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGD 1145 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +ENL + + + L E+ D + L+ ++ + + +ALR Sbjct: 1146 LAHELENLYEGLIDRRFNHSPTLAALLNESHDHLAILLEQL--YRQEALSDPSALIEALR 1203 Query: 125 ------------QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR----------- 161 Q + A + P L V E D S + Sbjct: 1204 SCRTLESAGPEVQASPAAHEDLPEHDAELREVFLEEGFDIMESSGAALARWQADPHNMLE 1263 Query: 162 -----IILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVI 216 L LK G + +G L + + S ++ P + + + + Sbjct: 1264 VENLLRDLHTLKGGARMVEIAPIGDLAHELETLYEGLSAGSLQPAPLMIGLLQSGQDVLA 1323 Query: 217 EADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNEST-------------- 262 + + ++ A P+G + + + Sbjct: 1324 DMLDAVRNEKPLPDASLLIESIRRLATDEPSGAQLAAQDPEVHPESVVAVAPVAEGEVER 1383 Query: 263 ----SIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQ 318 ++V E+++ L+NL GE I + + Q+ + ++ +++ ++ Sbjct: 1384 SGPEMVKVPAEQLEDLVNLAGETSIFRGRIEQQIIDSQI--------ALVEMETTIERMR 1435 Query: 319 ESVMSIRMMPMEYVFSR 335 + + + M + SR Sbjct: 1436 DQLRRLDMETQGRILSR 1452 Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 40/239 (16%), Positives = 73/239 (30%), Gaps = 7/239 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVL-----QPEAPDAEQLNAIFRAAHSIKGGAGTFGF 59 + F +EADE+L + ++L D+ L + RA H++KG Sbjct: 627 DDELRDVFLEEADEVLDALREYLPRWFTSLGSDGHWDSTALTEVRRAFHTLKGSGRMVRA 686 Query: 60 SVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI 119 +L E +ENLL+ G++ ++ L E + ++ + + + + D + Sbjct: 687 LILSELAWAVENLLNRVLEGDVLPGLEVQQLMTEVQALLPSVIRDFAEGAQCQRDDVDLL 746 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 AL E P V DE Q L + Sbjct: 747 AAR--AHALANGLEPPMLPAADDHVPGQPVADEPLDPQLLEIFRQEALGHLNTLGRFLDN 804 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + + L G + + DQ+ E I +P + Sbjct: 805 AEQSASPAISDAVLRALHTLKGSAHMAGVLPIAELASPLDQLVREYKANLIDIGSPELA 863 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 104/336 (30%), Gaps = 26/336 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F EA L + + L + A +A+ RA H++KG A G + E Sbjct: 780 DPQLLEIFRQEALGHLNTLGRFLDNAEQSAS-PAISDAVLRALHTLKGSAHMAGVLPIAE 838 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++ L+ E + + + + + L + ++ + L+ + D + +A Sbjct: 839 LASPLDQLVREYKANLIDIGSPELALLRSAEPLLHKGLEQLDSTPLADIPGAAPLIEAAL 898 Query: 125 QLALEAKGETPSAVTR-------LSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + + +++A + + + R GE L Sbjct: 899 AMLNDRLTVVLRESDSGLRIKRNPTLLAGFLAEGMDIVLDAENLLQRWRQHPGERQELSA 958 Query: 178 ELGHLTTL--------TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 L LTTL V L G + E + F A+ + + Sbjct: 959 LLDELTTLGHGAHLADLPQVDELCEALLDLYGAVEESSLAVSERFFDVAENAHEALINML 1018 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 +++ ++ E ++ + + ++ + V EL + LA Sbjct: 1019 DQVAAGQDVEPRPECVRALNQLLDQALDPSATGLVKSDGHR----TLSVTELNAATAQLA 1074 Query: 290 QRSSELDPVNHGD------LITSMGQLQRNARDLQE 319 + + D L ++ L + LQ Sbjct: 1075 SEAGHTEVAGPDDEIVEIFLEEAVDILDSAGQALQR 1110 Score = 66.8 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 32/230 (13%), Positives = 68/230 (29%), Gaps = 9/230 (3%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E +++ D E L + + ++L+A+ ++ GA + E Sbjct: 924 LLAGFLAEGMDIVLDAENLLQRWRQHPGERQELSALLDELTTLGHGAHLADLPQVDELCE 983 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYICQALRQ 125 + +L + ++ ++ + + LD Q EP + Q L Q Sbjct: 984 ALLDLYGAVEESSLAVSERFFDVAENAHEALINMLDQVAAGQDVEPRPECVRALNQLLDQ 1043 Query: 126 LALE-------AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 + G +VT L+ + + + + E + + Sbjct: 1044 ALDPSATGLVKSDGHRTLSVTELNAATAQLASEAGHTEVAGPDDEIVEIFLEEAVDILDS 1103 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 G + A L D+ A + V E + E + Sbjct: 1104 AGQALQRWLADPENPAPLASLQRDLHTLKGGARMAEVAEVGDLAHELENL 1153 >UniRef50_A4BK22 Chemotaxis protein histidine kinase and related kinase (Fragment) n=1 Tax=Reinekea blandensis MED297 RepID=A4BK22_9GAMM Length = 1355 Score = 526 bits (1356), Expect = e-148, Method: Composition-based stats. Identities = 179/662 (27%), Positives = 305/662 (46%), Gaps = 23/662 (3%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ D + F DEA ELL ++E + + + + + + R H++KGGA L Sbjct: 547 DLDFDILEIFIDEAGELLNELENAVEEWRSDPTNEAHADEMKRVLHTLKGGARLARLKAL 606 Query: 63 QETTHLMENLLDEARRGEMQLNTDII-------NLFLETKDIMQEQLDAYKQSQEPDAAS 115 + H E+ + A++ + L+ + + + +Q+ L+ + S Sbjct: 607 GDQAHDFESFIIRAQQNRIDLDDAFFKEVLLRQDSLVNDIERLQKVLEEHGSESGGFGPS 666 Query: 116 FDYICQALRQLALEAKGETPSA------VTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + + + + E V +SEP D +++ P + Sbjct: 667 VIQMVSEMDESEFDQMSEGDEPKTGLTLVPEQETPVESEPDDSSTKNVVPFKARQETTSP 726 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDI-TAVLCFVIEADQITFETVEV 228 D + VK + +L L E I A L + T ++ Sbjct: 727 KSGDARGNAQAKRNQPQETVKVSANLLEGLVNLAGETSISRARLEQEVSDFGFTLGDMDQ 786 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 + V +L E +E+ +N + +++ Q+ L L+ L Sbjct: 787 TIDRLRDHVRRLDMETEAQIIFRQERAEETNYEDFDPLEMDRYSQIQQLSRSLMEATYDL 846 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 S L D T + Q R +LQE +M RM+P + R R+VR ++G+LG Sbjct: 847 QDIKSTLSD-KTRDAETILLQQSRINTELQEGLMRTRMVPFNRLLPRLRRIVRQVSGELG 905 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K V+ + + E+D++++ER+I PL HL+RN++DHGIE P+ R +AGK G + L Sbjct: 906 KNVDFMVGNAEGEVDRTVLERMISPLEHLLRNAVDHGIEKPDVRFSAGKAERGTIRLDLS 965 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTD 467 +GG+I + + DDG G++ E+I AKA +GL + +++D EV I GFSTAE VT Sbjct: 966 REGGDIVLSLEDDGKGIDVEKIRAKAIERGLMKPDADLNDTEVMQFILEAGFSTAEAVTQ 1025 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVV ++++GG + I S G G+ I LP T+++ + V + D+++ LP Sbjct: 1026 ISGRGVGMDVVNSEVKQLGGSIFIDSVAGRGSMFTIRLPFTVSVNRALMVNIMDDLYALP 1085 Query: 528 LNAVMESLQPREADL-HPLAGGERVLEVRGEYLPIVELWKVFNV---AGAKTEATQGIVV 583 L ++ ++ L + E G + + + + +V Sbjct: 1086 LTSIEGIVRVTPKQLMEYYKPDAPLFEYGGSRYRLEYMGALLHTGAKPSLAGLDQSVPLV 1145 Query: 584 ILQSGGRR--YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 +++ R AL VD+L+G ++VVK L + + KVPG+S ATILGDGSV +I+D+ AL Sbjct: 1146 LVRGNDARHSMALHVDRLMGSREIVVKTLGAQFSKVPGVSGATILGDGSVVVILDLGALI 1205 Query: 642 AI 643 Sbjct: 1206 RS 1207 Score = 111 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 104/298 (34%), Gaps = 2/298 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA+++L +++Q L + + ++ A+ R H++KGGA S L + Sbjct: 359 DPELVEIFLEEANDILENIQQSLDGWIEDTQNTIEVEALQRDLHTLKGGARMAEVSPLGD 418 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + +G+ Q + +I L + D + E + + S ++ D + + Sbjct: 419 LAHELEFLYEGLAQGQYQSSPGLITLLQQCHDRLAEMVGDIESS-MTCVSAPDLVWAISQ 477 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +P +T + + ++ + E + +E ++ Sbjct: 478 FRKNPGSPPSPVNLTPVKEEPELPVEEPIDDTADSVTTPPVEETESEPETTDEVAAEDSS 537 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 T + L + ++ + ++ + + VL Sbjct: 538 DTVTEALPEDLDFDILEIFIDEAGELLNELENAVEEWRSDPTNEAHADEMKRVLHTLKGG 597 Query: 245 APTGRVEREKTTRSNESTS-IRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A R++ + + IR ++D E+++ Q L L V Sbjct: 598 ARLARLKALGDQAHDFESFIIRAQQNRIDLDDAFFKEVLLRQDSLVNDIERLQKVLEE 655 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 4/278 (1%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 + F E+ +++ D E L + + + R ++ A L Sbjct: 186 EDVSLMSIFLSESMDIVMDAESILDQWRSTGEAGDASQTLIRELDTLAQAAHAVDLIPLS 245 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 + ++ + +L A + NL + + + +D Q + + L Sbjct: 246 QLSNELRSLYVAAESNPYIIEEKFFNLAHDGHESLISMMDRLAAGQSIRTDAL--FSERL 303 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 +QL S A S+P D S P + + L Sbjct: 304 QQLYDLYAIPYQVLEPEQSDGASSDPVDSAPSSSEPSTPAALPPEVQAERFTVDGDPELV 363 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + ++ A+ + + + +EA Q T++ +++ L A Sbjct: 364 EI--FLEEANDILENIQQSLDGWIEDTQNTIEVEALQRDLHTLKGGARMAEVSPLGDLAH 421 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL 281 + + + I + + D+L +VG++ Sbjct: 422 ELEFLYEGLAQGQYQSSPGLITLLQQCHDRLAEMVGDI 459 Score = 65.3 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 48/365 (13%), Positives = 106/365 (29%), Gaps = 41/365 (11%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F E + L +E +L + + +A+ RA H+IKG A + E Sbjct: 56 DENLLKIFNSELETHLEFVETYLAD---QPVGQKLPDALQRALHTIKGSAHMASMDTIAE 112 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLE-----------TKD------------IMQEQ 101 +ENL+ + + N + N D ++ Q Sbjct: 113 IVQPVENLVKGYQERGLAANDSMTNSLERMVSLVKHFTSPGVDNQMTGDAREFIASVEGQ 172 Query: 102 LDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQS-RSQSPR 160 L + + A + +++ + S + + ++ + R Sbjct: 173 LAQLSAATDDSANEDVSLMSIFLSESMDIVMDAESILDQWRSTGEAGDASQTLIRELDTL 232 Query: 161 RIILSRLKAGEVDLLEEELGHLTTLTDVVK-------------GADSLSAILPGDIAEDD 207 + + L EL L + G +SL +++ A Sbjct: 233 AQAAHAVDLIPLSQLSNELRSLYVAAESNPYIIEEKFFNLAHDGHESLISMMDRLAAGQS 292 Query: 208 ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVA 267 I F Q+ + +++ + E +T + ++ Sbjct: 293 IRTDALFSERLQQLYDLYAIPYQVLEPEQSDGASSDPVDSAPSSSEPSTPAALPPEVQAE 352 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 VD LV + + + + + D ++ ++ RDL RM Sbjct: 353 RFTVDGDPELVEIFLEEANDILENIQQSLDGWIEDTQNTIE-VEALQRDLHTLKGGARMA 411 Query: 328 PMEYV 332 + + Sbjct: 412 EVSPL 416 >UniRef50_Q0PIE6 Chemotaxis signal transduction histidine kinase cheA n=1 Tax=Heliobacillus mobilis RepID=Q0PIE6_HELMO Length = 893 Score = 526 bits (1355), Expect = e-147, Method: Composition-based stats. Identities = 191/656 (29%), Positives = 319/656 (48%), Gaps = 44/656 (6%) Query: 10 QTFFDEADELLADM-EQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF----------- 57 + F +ADE + + L+ L D L +FR H++KG G Sbjct: 245 ENFLTDADEHSEIICGKLLIDLDGNPGDMAALADLFRRVHTLKGNLGLLLSFQGPDAPLR 304 Query: 58 -GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 E ME LL++ R + + + ++ D +Q + + Q + Sbjct: 305 AAAKETMEVFQRMEELLEKIRTLRLPVPVWVTDICFACMDALQRLMTMMRSGQMEKDPAN 364 Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + + L ET + S V+ + + S + L+R E E Sbjct: 365 PPLLKELVAARDRLDAETSTVPLPNSSVSATAGEPITSSQKGQEDPSLARTNIREPKKDE 424 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 + K +S D+ + S Sbjct: 425 STSEEASAQKHRDKDLNSNFGG--------------------DKSNRAAEKTQGDSSDRN 464 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 K + P+ R + + SIRV+ EK+++L+N + EL +T++ +Q + +L Sbjct: 465 NAKGGSLSCPSKRTGSDSIHGTTG-HSIRVSEEKINRLMNAIAELAVTKNAFSQIARKLM 523 Query: 297 -----PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQV 351 PV ++ + + R + +L++++M++RM + VF ++PR++RD+A + GK++ Sbjct: 524 MEHNLPVISREVKDAGQWVSRISAELEDAIMAMRMTEVRTVFQKFPRVIRDIALQTGKRI 583 Query: 352 ELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQG 411 L + G TELDK++I++I DPL HLVRN+ DHGIE +R+A GK+ G + L A +G Sbjct: 584 SLMMEGEDTELDKTIIDQIGDPLMHLVRNAADHGIEPEAERIAKGKDPQGRVWLRAYSRG 643 Query: 412 GNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDV 468 + IE+ DDG GLN + + KA +G +E+M++ + LIF PGFSTA+ V+++ Sbjct: 644 KYVFIEIEDDGKGLNPQALKEKAVEKGFITAAQAEDMNETQAYQLIFLPGFSTAKAVSEI 703 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVGMDVV+ NI + G + I S+ G GT + + LPLTL + G+ V VA ++ ILPL Sbjct: 704 SGRGVGMDVVRNNITALRGTISISSQLGKGTKLVMQLPLTLVVSRGLMVEVASQMLILPL 763 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 + V+E+L+ L G + +L RGE L +V L +V + G + + VVI+ G Sbjct: 764 DNVLETLKVPGERLLMYRGRK-LLHHRGEVLGVVSLAEVIGM-GQEELTERTPVVIVTDG 821 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 + L+V++LIG+ V+VK L +PG+ TI+GDG VAL+++ L + Sbjct: 822 HMKVGLIVNRLIGEQDVLVKPLPDYLSSLPGMGGGTIMGDGRVALVMNPIELIKMA 877 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 121/335 (36%), Gaps = 12/335 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S D + Q F +EA E L +E+ LL L+ LN IFR H++KG A FGF+ Sbjct: 5 FSADDVEMLQAFIEEAGEYLQRVEEELLKLEVSDGTPGVLNDIFRQIHTLKGLASFFGFA 64 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + +H E +LD R +QLN+ I+ L L D + E + ++S E A Sbjct: 65 EITRLSHQAEYVLDALRSDRIQLNSSIVELLLNAGDALGEMIRLLQESCEKWNAGT---- 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + ++ L + + L + +P S G E E Sbjct: 121 --VLEIELTCSQDVEKLIQDLESIIPPKPSASGGTMASTTVQDSLEPVGGTPSDCESEDK 178 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 T V + ++ +A ++A + L + + +T + V Sbjct: 179 GTETEASVGQAFNAPNAPNAPNVAVVQEGSDLPVASDRNHVTVNQDTHIDRELMALVKGQ 238 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVE----KVDQLINLVGELVITQSMLAQRSS-EL 295 A+ A + + + ++ + L +L + + L S + Sbjct: 239 ASAAAAENFLTDADEHSEIICGKLLIDLDGNPGDMAALADLFRRVHTLKGNLGLLLSFQG 298 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRM-MPM 329 ++ + +L E + ++R+ +P+ Sbjct: 299 PDAPLRAAAKETMEVFQRMEELLEKIRTLRLPVPV 333 >UniRef50_C9XKI0 Chemotaxis protein n=8 Tax=Clostridium difficile RepID=C9XKI0_CLODC Length = 710 Score = 525 bits (1354), Expect = e-147, Method: Composition-based stats. Identities = 196/703 (27%), Positives = 342/703 (48%), Gaps = 66/703 (9%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQ-LNAIFRAAHSIKGGAGTFGFSVLQ 63 + F E LL +++ ++ ++ E +N FR H+IKG A G + Sbjct: 11 MRQMLDMFIFETSLLLEQLDEIMIQIEKEKVFTHNNINETFRIMHTIKGSASMMGLDNIS 70 Query: 64 ETTHLMENLLDEARRGEMQL--NTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 H +E+L R G++++ N + +L ++ D ++ +D + ++ + + Sbjct: 71 ALAHSVEDLFYAIREGKIEVLDNDLLFDLVFQSLDFIRRDIDELQSRGCI-SSDYSNFIE 129 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + + + S ++ + +S + E S + +K E Sbjct: 130 GIEEYVSTLELS-SSMKSKDNANLESTDEKEAIDSNFEYKEDSDVVKIIFEQGCMMENVR 188 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAV--------LCFVIEADQITF---------- 223 L ++ P D+ + + + FV + D+ Sbjct: 189 AFMLVFELRDYCEFIDFYPKDVETNAESTEYIKSYGFYIQFVAKEDKAIVYKTIEDNLYV 248 Query: 224 ---------------------------ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTT 256 + +VS E + + EK + Sbjct: 249 KEYINISKKEIEMKNTSNNDAVENKLKDNNKVSKSYQNNYTEDEIQEDVLNEKTDMEKDS 308 Query: 257 RSNESTSIR--------VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMG 308 S E+ + V +EK+D L N+VGE+VI +SM+ + V+ + + Sbjct: 309 LSEENEHLPISKQSIMSVNLEKLDLLQNIVGEIVIMESMVVNSVNS-TGVDIDNFNKATR 367 Query: 309 QLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368 QL + +LQ+ VMS+RM+ + VF + R+VRD+ KL K VEL +G+ TE+DK++I+ Sbjct: 368 QLHKLTDELQDIVMSMRMIQIAGVFQKMHRIVRDMNKKLDKNVELITIGAETEVDKNVID 427 Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428 + +P HL+RN++DH IE E+R+A GK VG ++LSAE+ GG I ++DDG G+ R+ Sbjct: 428 NLAEPFMHLIRNAMDHAIEPIEERIAKGKEEVGKIVLSAENLGGEAVISISDDGRGIMRD 487 Query: 429 RILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMG 486 +ILAKA QGL + +DDEV LI PGFST E +T+ SGRGVGMD+V+++I+K+G Sbjct: 488 KILAKAKEQGLLKHQINEYTDDEVNSLIMTPGFSTKESITEFSGRGVGMDIVRKSIEKVG 547 Query: 487 GHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE-ADLHPL 545 G +E++SKQ GTT I +PLTL+I++GM +V D +F LP++++ + + + + Sbjct: 548 GSIEVKSKQDEGTTFTIKIPLTLSIVEGMKFKVGDSLFTLPISSIRRTFKLTDLNQIITE 607 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 ++ + G +PI+ L K++N+ T G ++I+++ + + VD++IG QV Sbjct: 608 GNKTELITIYGACIPIIRLHKIYNIQTKVTNLMHGNMIIIENEHKAVCIFVDEIIGNQQV 667 Query: 606 VVKNLESNYRKV----PGISAATILGDGSVALIVDVSALQAIN 644 VVK + + G+S TILGDGS++LI+D ++ I Sbjct: 668 VVKPFPVYFNRFNIKNKGLSGCTILGDGSISLIIDADSIIEIY 710 >UniRef50_A6F1T3 Chemotaxis protein histidine kinase and related kinase n=1 Tax=Marinobacter algicola DG893 RepID=A6F1T3_9ALTE Length = 2501 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 169/655 (25%), Positives = 285/655 (43%), Gaps = 26/655 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ + F +EA E+L +EQ L + + + RA H++KGGA L + Sbjct: 1730 DAEVLEIFLEEAGEILDQLEQLLDDWRKDPANHHFNQEAQRALHTLKGGARLSQLVELGD 1789 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G + D + + ++ E A + L Sbjct: 1790 QAHALETRLIDL--GGNTPGDEAWQAITNDHDAIVALVGDIRKRFEDTGAVPEPTKPDLE 1847 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L E + + R + + L L Sbjct: 1848 TEDLPKPQEPAAKAPAKPEKPVAPAPKPNKVPSKAPATAAQRAPQETIRVSAPLLDELVN 1907 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 L D + + +Q+ +E +I + + Sbjct: 1908 LAGETSITRGRLEQQTSDFSHNLDEMAATIERLREQLRRMEIETETQILFRAEKEHGPD- 1966 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + +++ + L L + S LA L D Sbjct: 1967 --------------YGDDFDPLEMDRYSAIQQLSRALTESSSDLADLRETLSD-RVRDTE 2011 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 T + Q R +LQE +M RM+P + R R+VR ++G+L K+VE + E+D+ Sbjct: 2012 TLLVQQSRINTELQEGLMKTRMIPFASMVPRLRRIVRQISGELSKKVEFDVRNPEGEMDR 2071 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ER+I PL H++RN+LDHGIE P R AGK G + LS +GG++ + + DDGAG Sbjct: 2072 NILERMIAPLEHMLRNALDHGIEKPSDRKKAGKPETGEVTLSLTREGGDVVLRMIDDGAG 2131 Query: 425 LNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + + I KA SQG+ E++S+ E+ I PGFSTA+ VT +SGRGVGMDVV I+ Sbjct: 2132 IPAQVIRDKAISQGMMAKDEDLSEREILQFILQPGFSTAQAVTQISGRGVGMDVVASEIK 2191 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG ++I S G GT + LP T+++ + V ++ + +PLN + ++ +L Sbjct: 2192 QLGGSLDIDSTVGKGTVFTVRLPFTVSVNRALMVSTGEDFYAIPLNTIEGIVRVSTYELE 2251 Query: 544 PLAG-GERVLEVRGEYLPIVELWKVFNV---AGAKTEATQGIVVILQSGGRRYALLVDQL 599 + E G+ + L + N + +A V++++ + AL VD L Sbjct: 2252 EYYKPDAPMYEYAGQQYRLQYLGSLLNSDHHPKLQGQALPLPVILVRGAEQPMALQVDSL 2311 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA---INREQRMAN 651 +G ++VVK+L + V G+S ATILGDG+V +I+D+ A+ ++ QR+AN Sbjct: 2312 MGSREIVVKSLGPQFSTVRGVSGATILGDGNVVVILDLPAMIRSDILSERQRLAN 2366 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 49/344 (14%), Positives = 119/344 (34%), Gaps = 15/344 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA +L+ L + + + + R H++KGGA G + + Sbjct: 1425 DPELIGIFLEEAYDLINSTGSALHTWSEDPNNRDVAAELQRDVHTLKGGARMAGVDAIGD 1484 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH++E+L ++ G++ + D+ +L D + + ++ + A+ + + Sbjct: 1485 LTHVLEDLFEKVAEGQLNASNDMNDLLFACHDRLAQMVEQVATQKPCPPAT--ELVAKVE 1542 Query: 125 QLA--------LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLE 176 + + +A +P L + E + Sbjct: 1543 AILSGKPIPSAESEEPAEEPEPVDEVPIADEQPASVTDAIAKASDDDLVGIFLDEGLEIH 1602 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE-----VSPK 231 E +G + L ++ A L V + + ++ Sbjct: 1603 EAIGECLAQWRDEPEELAGVTQLQQELHTLKGGARLSDVDPIADLAEAWSDALDPLIAGS 1662 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 + +L+L+ + T R N+ T+ V VE ++ + G+ + + A+ Sbjct: 1663 SNQSILLELSDKAHGTLRAMLTSLEEGNKPTADEVLVEALNDAHKVSGDELSGSAAQAEP 1722 Query: 292 SSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 S++ + V+ L + + L++ + R P + F++ Sbjct: 1723 SADGETVDAEVLEIFLEEAGEILDQLEQLLDDWRKDPANHHFNQ 1766 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 85/260 (32%), Gaps = 12/260 (4%) Query: 4 DIS-DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 D+ + + F +EA +L+ L + + L + R H++KGGA + Sbjct: 1247 DMDQELAEIFLEEARDLIDSTADALQSWSDNTENLDLLRLLQRDLHTLKGGARLADIQPV 1306 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 + +H +ENL + + + ++ +L + D + +DA +Q + P A + Sbjct: 1307 GDLSHELENLFEGLTEQRLAVTGELSDLLFRSHDRLAGMVDALEQQEPPRPAP--DLISE 1364 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH- 181 + A G P R + + + + + +L H Sbjct: 1365 IHAYMDSATGSRPVTDVRQQDAEPEDDEIPLAELEEDDTEEPETTAEQPEEEHATDLSHL 1424 Query: 182 --------LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L D++ S D D+ A L + + V Sbjct: 1425 DPELIGIFLEEAYDLINSTGSALHTWSEDPNNRDVAAELQRDVHTLKGGARMAGVDAIGD 1484 Query: 234 TPPVLKLAAEQAPTGRVERE 253 VL+ E+ G++ Sbjct: 1485 LTHVLEDLFEKVAEGQLNAS 1504 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 84/215 (39%), Gaps = 3/215 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+E+L + + L+ D + L + RA H++KG G + + E Sbjct: 605 DDEILGIFIEEAEEVLETINEFYPRLRRNHDDRDALTEVRRAFHTLKGSGRLVGATSIGE 664 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ ++ D+ +L + + ++ ++ Q + + Sbjct: 665 LAWSVENLLNRVIDQTLRPTDDMFSLIDDVNSRIPALINDFRDGQA--DGEVSKLIERAE 722 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQ-DEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 L+ K + +A S + P D + S++ S +A D L ++ Sbjct: 723 ALSTTRKTDIDTASEDASSADEEPPVIDSGNDSEAVSTGQHSAAEAEFEDDLIDDEILEI 782 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 + + + D++ LP + + D L V A Sbjct: 783 FIEEAGEVLDTIREYLPMLLRQHDDRTALSEVRRA 817 Score = 96.5 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 42/244 (17%), Positives = 81/244 (33%), Gaps = 1/244 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA E+L + ++L +L + D L+ + RA H++KG G V+ E Sbjct: 776 DDEILEIFIEEAGEVLDTIREYLPMLLRQHDDRTALSEVRRAFHTLKGSGRMVGALVVGE 835 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +EN+L+ G + +N DI L + + E +D +++ Q P + + Sbjct: 836 LAWSVENMLNRVIDGSIFMNDDIAALLEDVTAALPELVDDFEKRQ-PPSRDTSSMEARAN 894 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA + + + E + + E HL T Sbjct: 895 ALANGEIPDASTMPPSEPQSGAVSGEAEPELTAAEDEDDAVVDPVLLDIFESETETHLQT 954 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 L D + A +++ D + + A V + Sbjct: 955 LQDFLDAAGDKASVAYTDDLSRALHTLKGSAHTAGIAPIAAVITPLERFVKEARAQNKRA 1014 Query: 245 APTG 248 Sbjct: 1015 DRDA 1018 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 37/236 (15%), Positives = 72/236 (30%), Gaps = 6/236 (2%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F E + L + Q L + + + RA H++KG A T G + + Sbjct: 940 LLDIFESETETHLQTL-QDFLDAAGDKASVAYTDDLSRALHTLKGSAHTAGIAPIAAVIT 998 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E + EAR + + D I+L +T + + L +++ + D + L Q++ Sbjct: 999 PLERFVKEARAQNKRADRDAISLIHDTCHFLTQGLGQIRENPQADLPGTETFLAKLEQVS 1058 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 S E Q + L A + E T+ + Sbjct: 1059 DATLRGDGSRTDE-----PQESARPQLVQLFLNEGLDILLDADRILDEWAENPEATSALE 1113 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 ++ L D D+ + + + + V V Sbjct: 1114 TLRKELHLLTEGAQDAGLADVAELSGALRQVYERASGPDFVPDSPFYDSVRAGHEH 1169 Score = 64.9 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 90/295 (30%), Gaps = 24/295 (8%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 Q F +E ++L D ++ L L + + H + GA G + + E Sbjct: 1078 PQLVQLFLNEGLDILLDADRILDEWAENPEATSALETLRKELHLLTEGAQDAGLADVAEL 1137 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 + + + + A + ++ + + + +D + + L Sbjct: 1138 SGALRQVYERASGPDFVPDSPFYDSVRAGHEHLINMMDQVAAG--LATEANADLIADLET 1195 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 LA + EP + I L+A EV+ E G L Sbjct: 1196 LAPATPEDN-------------EPDAFEQEFTEDLEEIDRSLEA-EVEDAPESSGEQPPL 1241 Query: 186 TDVVKGADSLSAILPGDIAEDDIT---AVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + + D A + + A D I L + + + + T A Sbjct: 1242 AETDEDMDQELAEIFLEEARDLIDSTADALQSWSDNTENLDLLRLLQRDLHTLKGGARLA 1301 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 + P G + E T R+AV +L +L L + LA L+ Sbjct: 1302 DIQPVGDLSHELENLFEGLTEQRLAVT--GELSDL---LFRSHDRLAGMVDALEQ 1351 Score = 44.1 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 96/310 (30%), Gaps = 12/310 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S ++ + E+ L ++ ++ + ++ + HSI+GG Sbjct: 437 SRELGEASSALLRESRNTLEQVKTAIVNFIASQWETGEIEHVPGLLHSIRGGLSLIPLDR 496 Query: 62 LQETTHLMENLL-DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + E + + G+ + ++ + ++ L+ + + + Sbjct: 497 VADMLASAERYISEVLLGGKQVPDWKQLDTLADAITSIEYYLERLAEGISDNESVLGVAE 556 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 +L L E + + S+ P + + K+ + +LL++E+ Sbjct: 557 ASLDSLGFPVGEE-------PTWKHPTADDVPVVDSEIPVESVEAESKSSDRELLDDEI- 608 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 L + + + + + T + ++ L Sbjct: 609 -LGIFIEEAEEVLETINEFYPRLRRNHDDRDALTEVRRAFHTLKGSGRLVGATSIGELAW 667 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN--LVGELVITQSMLAQRSSELDPV 298 + E +++ + + I ++ LIN G+ S L +R+ L Sbjct: 668 SVENLLNRVIDQTLRPTDDMFSLIDDVNSRIPALINDFRDGQADGEVSKLIERAEALSTT 727 Query: 299 NHGDLITSMG 308 D+ T+ Sbjct: 728 RKTDIDTASE 737 Score = 43.3 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 40/346 (11%), Positives = 98/346 (28%), Gaps = 34/346 (9%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E + L + L D +L H + G T ME L Sbjct: 16 EIQDTLTQGQHALEAYVENRDDTARLRFCLNYLHQVHGTLQMVELYGAALLTEEMEKLTQ 75 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA---- 130 + D +++ ++ + + L+ S++ + LR E+ Sbjct: 76 AVLNETVASVDDAVDVLMQAILQLPQYLEHLASSKDDFPMVLLPLLNDLRAARGESLLSD 135 Query: 131 ----KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 K + + + QD + + + + V + H + Sbjct: 136 TSLFKPDLSPSRATAAANVSQRLQDPKVLGHIRKLRQMYQFALAGVIREADLDAHFDYMQ 195 Query: 187 DVVKGADSL-------SAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 V++ L + + V A + ++ + T + Sbjct: 196 KVIQRLIRLCQKTPRGELWKAAGAFVETLQQHANPVNTAVKSLLRELDAEIRRLTDEHID 255 Query: 240 LAAEQAPTGRV-------EREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRS 292 + + P + R + + +R A ++DQ + ++ +S ++ Sbjct: 256 ILQQAVPEALLKHLLYYVARARDLDTPHVKELR-ASYRLDQALPSDDDVDAAKSRVSGPG 314 Query: 293 SELDPVNHGDLITSMGQLQ-----------RNARDLQESVMSIRMM 327 + L + +L+ R +L+E + +R + Sbjct: 315 RDAIHSVVSALNEELAKLKDQLDLFVRSELRQNDELEELLPGLRQV 360 >UniRef50_A1U772 CheA signal transduction histidine kinase n=2 Tax=cellular organisms RepID=A1U772_MARAV Length = 2539 Score = 525 bits (1353), Expect = e-147, Method: Composition-based stats. Identities = 173/655 (26%), Positives = 299/655 (45%), Gaps = 22/655 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA E++ +EQ L + E + RA H++KGGA S L + Sbjct: 1764 DPEVLEIFLEEAGEIMDQLEQLLDDWRREPANEHFNREAQRALHTLKGGARLSQLSELGD 1823 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H E L + G + D + + ++ E A + + Sbjct: 1824 KAHAFETRLIDL--GGNAPTEEQWQAITGDHDAIIALVADIRKRFESGAQAPAPQPEKAP 1881 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + E P A T K P + + + + L Sbjct: 1882 EPVREEPAPVPKATTAEPAPTKPVPAPAKPEKSAAQARKKAADAQRAAQETIRVSAPLLD 1941 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + G S++ + D + +++ + + + + + E Sbjct: 1942 ELVNLAGETSITRGRLEQQSSDFSYTLDEMAATIERLREQLRRMDIETEAQILFRAEQEH 2001 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 P + +++ + L L + S LA L D Sbjct: 2002 GP-----------DYGDDFDPLEMDRYSSIQQLSRALSESTSDLADLRETLSE-RVRDTE 2049 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 T + Q R +LQE +M RM+P + R R+VR ++G+LGK+V+ + + E+D+ Sbjct: 2050 TLLVQQSRINTELQEGLMKTRMIPFSSMVPRLRRIVRQISGELGKKVDFDVRNAEGEMDR 2109 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ER++ PL H++RN+LDHGIE PE R AGK + G ++LS +GG++ + + DDG G Sbjct: 2110 NILERMVAPLEHMLRNALDHGIETPEDRTKAGKPATGEVVLSLTREGGDVVLRMMDDGKG 2169 Query: 425 LNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + + I KA QGL + E++S+ E+ I PGFSTA+QVT +SGRGVGMDVV I+ Sbjct: 2170 IPSDVIRDKAVRQGLMRADEDLSEREILQFILQPGFSTAQQVTQISGRGVGMDVVASEIK 2229 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG ++I S G GTT + LP T+++ + V ++ + +PLN + ++ +L Sbjct: 2230 QLGGSLDIDSALGRGTTFTVRLPFTVSVNRALMVSTGEDFYAIPLNTIEGIVRVSTYELE 2289 Query: 544 PLAG-GERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIVVILQSGGRRYALLVDQL 599 + E G+ + L + N + +A V++++ + AL VDQL Sbjct: 2290 EYYKPDAPMYEYAGQQYRLQYLGSLLNSDHQPKLQGQALPLPVILVRGAEQPMALQVDQL 2349 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA---INREQRMAN 651 +G ++VVK+L + V G+S ATILGDG+V +I+D+ A+ ++ QR+AN Sbjct: 2350 MGSREIVVKSLGPQFSSVRGVSGATILGDGNVVVILDLPAMIRSDILSERQRLAN 2404 Score = 121 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 53/351 (15%), Positives = 115/351 (32%), Gaps = 21/351 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA +L+ L + + E + R H++KGGA G + + Sbjct: 1451 DPELVGIFLEEAYDLINSTGSALHTWSEDPSNREVAAELQRDVHTLKGGARMAGVEAIGD 1510 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK-QSQEPDAASFDYICQAL 123 TH++E+L ++ G+++ + + +L D + + ++ Q P A + QA+ Sbjct: 1511 LTHVLEDLFEKVAEGQLEASGQMTDLLFACHDRLAQMVEQVATQKPCPPAEELVHQVQAI 1570 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL---- 179 + E P + V++ E + + + S L D +++L Sbjct: 1571 LRGESLPSEEPPQSEPGEPEVSELEELEISEQPAAESEESASSLNESLEDATDDDLVGIF 1630 Query: 180 --GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFV----IEADQITFETVEVSPKIS 233 L + + D + L + +D + + + Sbjct: 1631 LDEGLEIHEAITECLDQWREEPEELAGITRLQQELHTLKGGARLSDVDPIADLAEAWADA 1690 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI---------T 284 ++ +Q+ + K D L+ L T Sbjct: 1691 LDQLIAGDRDQSAMLGLSDRAAASLKSMLDALEDSRKPDADAALINALRTAAPAEDTSGT 1750 Query: 285 QSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSR 335 +S A+ + D V+ L + + L++ + R P F+R Sbjct: 1751 ESQQAETAE-ADSVDPEVLEIFLEEAGEIMDQLEQLLDDWRREPANEHFNR 1800 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 96/282 (34%), Gaps = 8/282 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD + F +EA +L+ + L + + + L + R H++KGGA Sbjct: 1273 AMD-DELAAIFLEEARDLIDSTAEALHSWSEDTSNLDLLRLLQRDLHTLKGGARLADIPA 1331 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + + +H +ENL + + +N + +L D + ++A + S+ P A + Sbjct: 1332 VGDLSHELENLFEGLTEQKFSINDTLSDLLFRCHDRLAGMVEALEASEPPRPAP--DLIT 1389 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + A+G P A+ E ++ A E +L +L H Sbjct: 1390 EIHAYIDGARGTRPVTDVHTDDSAEPEDEELTLPEPELEESTEETAGAEEEELQATDLSH 1449 Query: 182 L-----TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 L + + + +ED + ++ D T + + Sbjct: 1450 LDPELVGIFLEEAYDLINSTGSALHTWSEDPSNREVAAELQRDVHTLKGGARMAGVEAIG 1509 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLV 278 L E E + + + +++ Q++ V Sbjct: 1510 DLTHVLEDLFEKVAEGQLEASGQMTDLLFACHDRLAQMVEQV 1551 Score = 95.3 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 7/219 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+E+L + + L+ + D E L + RA H++KG G + + E Sbjct: 613 DDEILGIFVEEAEEVLQTIHEFYPRLRQDHDDREALTEVRRAFHTLKGSGRLVGATSIGE 672 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ ++ D+ L + + ++ ++ + + + + + Sbjct: 673 LAWSVENLLNRVIDQTIKPTDDMFTLVDQVNARIPSLIEDFRNGET--SGDVNELIEQAE 730 Query: 125 QLALEAKGETPSAVTRL----SVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 LA + ET A ++ + E ++P S ++ + + Sbjct: 731 ALATTRRAETGQAAEETTGEAETADEAAAEHEIEIPETPATAPTSEVEEADDSDDLIDDE 790 Query: 181 HLTTLTDVV-KGADSLSAILPGDIAEDDITAVLCFVIEA 218 L + + D++ LP + + D + L V A Sbjct: 791 ILEIFIEEAGEVLDTIREYLPMLLRQHDDRSALAEVRRA 829 Score = 93.4 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 91/247 (36%), Gaps = 1/247 (0%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EA E+L + ++L +L + D L + RA H++KG G +V+ E Sbjct: 790 EILEIFIEEAGEVLDTIREYLPMLLRQHDDRSALAEVRRAFHTLKGSGRMVGATVIGELA 849 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ G + +N DI L + D + + +++ Q P + + + L Sbjct: 850 WSVENMLNRVIDGSVFMNDDIAQLLQDVTDAVPALVTDFEKRQAP-SLNTSAMEARANAL 908 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 A + + + +E + + + EVD + ++ T T Sbjct: 909 ANGEIPDATAMPLVDTDTESAEETTAGTVTPEDSIEYDALPGEDEVDPVLLDIFENETET 968 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + + L + A + ++ TP + +A Sbjct: 969 HLQTIKEYLESAGDKATAAYTDDLSRALHTLKGSANTAGIAPIAEVITPLERFIKESRAQ 1028 Query: 247 TGRVERE 253 R +R+ Sbjct: 1029 NKRADRD 1035 Score = 76.4 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 52/331 (15%), Positives = 108/331 (32%), Gaps = 27/331 (8%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 F +E + L ++++L + A + + RA H++KG A T G + + E Sbjct: 958 LLDIFENETETHLQTIKEYL-ESAGDKATAAYTDDLSRALHTLKGSANTAGIAPIAEVIT 1016 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E + E+R + + D++ L + + + L +++ + A D + L Q+ Sbjct: 1017 PLERFIKESRAQNKRADRDVLALISDAAGFLTQGLAQIRENPQAPLAGTDEYLERLHQVC 1076 Query: 128 LEAKGETPSAVTRLSVVAKSEP-------------------------QDEQSRSQSPRRI 162 + S +Q + + R Sbjct: 1077 EQTLTSHAQTDDEQPARKSSSQLVQLFLGEGLDIVLDAESILDRWSENPQQDEALATLRA 1136 Query: 163 ILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQIT 222 L +L G D ++ L A S + PGD + A +I Sbjct: 1137 ELEQLTQGATDANLPDVAELAAALTRTYTAISKQGLPPGDDVFQTLRAGHEQLINMMDQV 1196 Query: 223 FETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE-KVDQLINLVGEL 281 + P L+ A+ E ++ + + + ++D+L E Sbjct: 1197 AAGLTTEPSQELIQELEELAQATAAEPAEPDEFEQQFTDDLEEIDLSLEMDELEQATEEP 1256 Query: 282 VITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 +T++ +SE D +L + R Sbjct: 1257 ELTETPPLPETSEDDQAMDDELAAIFLEEAR 1287 Score = 50.6 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/311 (11%), Positives = 96/311 (30%), Gaps = 5/311 (1%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S ++ + + E+ L ++ ++ DA ++ + HSI+GG Sbjct: 438 SRELGEASEALIRESRNTLEQVKSAIVNFIASQWDAREIEHVPGLLHSIRGGLSLVPLDR 497 Query: 62 LQETTHLMENLL-DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + E + D + + ++ + ++ L+ + A Sbjct: 498 VADMLASAERYVTDVLLSNKQVPDWKQLDTLADAVTSIEYYLERLADGISDNDAILRVAE 557 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 +L L E ++T + A +E + S K + +LL++E+ Sbjct: 558 DSLASLGFPVGQEPTWSLTEETEEAPAEVPVAEEPEASAEETTAPEAKTSDAELLDDEI- 616 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 L + + + +D + T + ++ L Sbjct: 617 -LGIFVEEAEEVLQTIHEFYPRLRQDHDDREALTEVRRAFHTLKGSGRLVGATSIGELAW 675 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLV--GELVITQSMLAQRSSELDPV 298 + E +++ + T + ++ LI GE + L +++ L Sbjct: 676 SVENLLNRVIDQTIKPTDDMFTLVDQVNARIPSLIEDFRNGETSGDVNELIEQAEALATT 735 Query: 299 NHGDLITSMGQ 309 + + + Sbjct: 736 RRAETGQAAEE 746 >UniRef50_Q0HIF1 CheA signal transduction histidine kinases n=8 Tax=Shewanella RepID=Q0HIF1_SHESM Length = 736 Score = 525 bits (1352), Expect = e-147, Method: Composition-based stats. Identities = 228/528 (43%), Positives = 318/528 (60%), Gaps = 8/528 (1%) Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR---RIILSRLKAGEVD 173 + I + + E + V S + + A E+D Sbjct: 209 EDINAKPSAVLKTSTNEHIAVNKAAPVNEDSAVNGYGLDDELGYGFFESLTPETFASEID 268 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L + D + D + + ++A+ T S Sbjct: 269 ALTSASAKANPMKDAISPLDVQTESSISKPTRAKKQSKEAKPLQANTSTNAETTQLLSSS 328 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 A+ P +K + +++ ++RV K+D L+NL GELVITQSML + Sbjct: 329 AAISAAPASSNQPA----AKKASAASQDATLRVETSKIDTLVNLAGELVITQSMLTLIGN 384 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 EL L T++ +L+RN R++QE+VMS+RM+P+ +VF+R+ RLVRDL+ +LGK V L Sbjct: 385 ELGGELGERLKTALNELERNTREMQEAVMSVRMLPVSFVFNRFHRLVRDLSDQLGKNVSL 444 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 + G +TE+DK +IE+++DPLTHLVRNSLDHGIE PEKRLAAGK G L L A +GG+ Sbjct: 445 VIEGGNTEIDKGMIEKLVDPLTHLVRNSLDHGIEKPEKRLAAGKTEAGVLSLKASQRGGS 504 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 I I V DDG GLNRERIL KA G+ + ENM+D +V LIFA GFSTA +VTDVSGRGV Sbjct: 505 IVIAVHDDGGGLNRERILQKARENGMALPENMTDKQVWQLIFAAGFSTAAEVTDVSGRGV 564 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVV++NI+ +GG ++I S G G T I LPLTLAI+DGMSV V ++++ILPL ++E Sbjct: 565 GMDVVRKNIEALGGRIDIDSVAGQGATFEIQLPLTLAIVDGMSVSVGNQIYILPLVHIIE 624 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 S+QP+ L LA ER+L VR EYLP++ L+++ + GIVV+L+S +R+ Sbjct: 625 SIQPQTEQLKFLA-KERLLRVREEYLPLLNLYQLMEIEPQAKTPEAGIVVLLESNNKRFG 683 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 L VD L+GQ QVV+K+LE +YR++PG+S ATI+GDGSVALI+DV +L Sbjct: 684 LCVDALVGQQQVVIKSLEKHYRRIPGVSGATIMGDGSVALILDVESLA 731 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 128/267 (47%), Gaps = 3/267 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+++++F+Q FF+E+ E L +MEQ LL L +APD E+LN IFRAAHSIKGG+G FGF+ Sbjct: 1 MSINMAEFHQVFFEESHEHLENMEQLLLALDLDAPDPEELNTIFRAAHSIKGGSGIFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L TH+MENLLD+ R+G +L++ +I+L L T D + L+ Y++ + D ++ Sbjct: 61 ALTSVTHVMENLLDKTRKGTFELSSSVIDLLLRTVDTLSHILNLYREEEPIDWQQVEFAK 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL---LEE 177 L + T +A V A + + Q+ + + + S + VD E Sbjct: 121 NQLVAVLNGETFSTQTANAANGVSAANPNTNNQTEDKPLQAAVTSSVATQSVDDSFGFFE 180 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + L + + A +I +DI A V++ V + ++ Sbjct: 181 DEVELGLVDETEHFGFFDEAYTAKEIRAEDINAKPSAVLKTSTNEHIAVNKAAPVNEDSA 240 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSI 264 + G E T ++ I Sbjct: 241 VNGYGLDDELGYGFFESLTPETFASEI 267 >UniRef50_D2L008 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L008_9DELT Length = 723 Score = 524 bits (1351), Expect = e-147, Method: Composition-based stats. Identities = 214/721 (29%), Positives = 346/721 (47%), Gaps = 79/721 (10%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 DI + +E ELL ++E+ LL L+ + D E ++A FRA H+IKGG FGF + Sbjct: 3 DIDPSIGLYVEETRELLGELERGLLDLEKDPTDMEGVDACFRAMHTIKGGGAMFGFEEIS 62 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD-AASFDYICQA 122 TH +E + D R G++ + ++++L L KD + LDA ++ P+ A+ D + + Sbjct: 63 RFTHDVETVYDRVRSGQLTVTRELLSLTLAAKDHILALLDAPAEAVGPELRAASDELLAS 122 Query: 123 LRQLALEAKGE---------------TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRL 167 + + + + P R Sbjct: 123 FAAFLPAGSQPGKPAAAAPQAAGEAVASANPDQPAYACEGRPGPPGIYWIRFRPAPRILH 182 Query: 168 KAGEVDLLEEELGHLTTLT---------------DVVKGADSLSAILPGDIAEDDITAVL 212 + + +L + + + + ++ + + V Sbjct: 183 TGNDPVRILADLDAMGLVRVLRHGPLPDLDASDFEPEEAYGVYDMLVRTPCGINSLRDVF 242 Query: 213 CFVIEADQITFETVE------------------------------------VSPKISTPP 236 FV +T E + + Sbjct: 243 IFVEGDSDVTIERIHEGALRDDDLTALLGNLAGLDAAPTDVVLETLGRALAAMLASISQA 302 Query: 237 VLKLAAEQAPTGRVEREKTTR-SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 ++ ++ A G +E + + + ++RV ++D ++ + GELVI QS L Q Sbjct: 303 KAQVRSKVARIGAIEAGAQRQGAPAAATLRVDAARLDSVVTMAGELVILQSRLRQAVQAR 362 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 D + L+R +++ + +RM+P+ VFS++ RL+RDL+ LGK+V+ Sbjct: 363 DLDAAAAVDED---LERLTDAMRDVALGLRMLPIGTVFSQFTRLLRDLSASLGKEVDFEA 419 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 +G TELDK++I+RI DPL HL+RNSLDHG+E P+ R AGK G + LSA H GGN+ Sbjct: 420 LGGDTELDKTVIDRIKDPLVHLLRNSLDHGVEPPDARQRAGKTPHGRVTLSASHSGGNVV 479 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I + DDG G++ + KA +GL + + S+ E+ LIFAPGFSTA ++DVSGRGVG Sbjct: 480 ISIIDDGRGIDPAVVRQKAVERGLLAPDADPSEKELFDLIFAPGFSTAAAISDVSGRGVG 539 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVVKRNI+ + G VE++S G GTT+ I LPLTLAI+DG +V V + FI+PL + Sbjct: 540 MDVVKRNIEALRGTVEVESVLGRGTTVTIKLPLTLAIIDGFNVVVGRDSFIVPLVTLRGF 599 Query: 535 L-QPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYA 593 + + + ER+ G+ +P+V L ++F+V G + + VV+ + G Sbjct: 600 QERFVTGEARTVENMERM----GDLIPVVSLRRLFSVPGEQPGYER--VVVTEVEGEMVG 653 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 VD+++G+ Q V+K+L++ YR + IS TI GDGS++LI+DV L R Q + Sbjct: 654 FCVDRVVGRQQAVIKSLDTCYRHLKWISGTTINGDGSISLILDVPQLVRFVRGQEDSRLH 713 Query: 654 A 654 A Sbjct: 714 A 714 >UniRef50_B5Y7B3 Chemotaxis protein CheA n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y7B3_COPPD Length = 684 Score = 524 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 191/693 (27%), Positives = 338/693 (48%), Gaps = 68/693 (9%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 D++++ F E+ + + + +L++L+ + + + L +FRAAH++KG + T GF Sbjct: 1 MDDMNEYLPIFLQESYDYINLLNNNLVLLEQDPSNKQALAEVFRAAHTLKGMSATMGFQF 60 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA-------- 113 L + H +E+ L R ++ I L D M+ Q+ + ++ + Sbjct: 61 LADAAHELESALQIYRDTHEPVDEKAIELGFRVLDYMENQMKRIEANESLEPFHVTSSNE 120 Query: 114 ---------------------ASFDYICQALRQLALEAKGET------------------ 134 + + AL Q A E Sbjct: 121 VNEKGKKETTLEVTSSFALGAFEEEVVRAALEQGQKAAILEINLEQGVLMKGVRAFMVFK 180 Query: 135 PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 + ++ + + + + + +G++D L ++ + + V Sbjct: 181 AIEDSGFEAISSQPDAESLEKEEFDLEFRVLVVGSGDLDSLRNKILRIAEVASV-----D 235 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 + I + A + L Q +P S AA A T ++ Sbjct: 236 VIEIGLNEQAFPSSSNELREQTSTKQSDSGEGTKNPNSSDSLAQAYAASAAATAEEVDQQ 295 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNA 314 + IRV E V+ L++ + ELV+ ++ L + N L + +L R+ Sbjct: 296 QQKKPIKNYIRVPEEHVNNLMSAISELVLEKAELEL---AIKTGNEEALWSLYERLSRSI 352 Query: 315 RDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPL 374 Q + ++RM P+ +VF R+PR+VRDL+ L KQV + G TE+D+++I+R+ DPL Sbjct: 353 NLAQGEITALRMTPLSFVFERFPRMVRDLSRDLQKQVRFIMEGGDTEIDRTIIDRLGDPL 412 Query: 375 THLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKA 434 HL+RN++DHGIE PE R+ AGK+ G + L A H+G N+ I V DDGAG++ ++LAKA Sbjct: 413 VHLLRNAVDHGIERPEDRIKAGKDPTGTVRLKAYHEGNNVYIVVEDDGAGIDTAKVLAKA 472 Query: 435 ASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEI 491 +GL S+ +S +E+ +F PGFST++ V+++SGRGVGMDV+K ++++GG V++ Sbjct: 473 VERGLVTSDQASFLSQEEIFSFLFLPGFSTSDTVSEISGRGVGMDVLKNTVEELGGTVQV 532 Query: 492 QSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG--GE 549 +S G GTT+ + LPLT+AI+ + V+V +F LPL+ V E D+ + Sbjct: 533 RSVLGKGTTVIMRLPLTMAIISALLVKVNGLIFALPLSVVEEI----SNDVEAVKETPQG 588 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKN 609 VL +RGE LP+ + + N+ +V++++G ++ ALLV + +G+ ++V+K Sbjct: 589 NVLLLRGELLPVYSVAGLLNLP---DNGQNNHIVVIRNGQKKAALLVAETVGKQEIVIKP 645 Query: 610 LESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L+S + + AT+LGDG++ L+V+ S L Sbjct: 646 LKSRFV-PRYVDGATLLGDGTIGLVVNTSMLLE 677 >UniRef50_Q3JET7 CheA signal transduction histidine kinase n=2 Tax=Nitrosococcus oceani RepID=Q3JET7_NITOC Length = 1758 Score = 524 bits (1349), Expect = e-147, Method: Composition-based stats. Identities = 177/653 (27%), Positives = 297/653 (45%), Gaps = 17/653 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPE-APDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +EADELL + L Q + + R H++KGGA G ++L + Sbjct: 979 NELVAAFLEEADELLQASQISLSAWQKNFSSEQAPAEEFQRHLHTLKGGARLAGITLLAD 1038 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H ME + G+ + + L D + + + A I L Sbjct: 1039 LAHHMETIASTIIEGKQNTESGLFGLLQHCLDRLCTLCEFAQN-----AVPLPSISDLLI 1093 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +++ + PS+ + + + P L + + + + Sbjct: 1094 EISRYNSEDLPSSQKSEQARLIHDQELPAATLALPPEQKLHKTARPLAETGTPPVEQIRV 1153 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 D+ L ++ + + L I ++ +E + + +L E Sbjct: 1154 RADL------LDHLVNNAAEVNIFSTRLEQQIGTIRLNLGEMERTVARLRSQIRRLEIET 1207 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 E+ + + +++ QL L LV + S L LD + Sbjct: 1208 ETQIIYRHEEANNQHLEGFDPLEMDRYSQLHQLSRGLVESISDLTNIKETLDGTA-READ 1266 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + Q R DLQ+ +M+ RM+P V R R+VR A +L K+V++ + S ELD+ Sbjct: 1267 ILLLQQSRTGADLQQGLMNTRMLPFTGVTPRLHRIVRQTAQELDKKVQIKITDSGHELDR 1326 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ RI+ PL H++RNS+ HGIE R+AAGK +G++ LS +G I I V+DDG G Sbjct: 1327 TVLNRIMAPLEHMLRNSIAHGIEKAPLRIAAGKKEMGSISLSLTREGSEIVIHVSDDGQG 1386 Query: 425 LNRERILAKAASQGLTVSENM-SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 ++ E+I AKA ++GL E M D ++ LI GFSTA V+ V+GRG+GMDVV IQ Sbjct: 1387 IDLEKIRAKALTRGLVQKEAMPPDADLIQLILESGFSTANNVSQVAGRGIGMDVVNSEIQ 1446 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 + G + I S++G GTT I LPLT I+ + V +E+F LP+ +V ++ + + Sbjct: 1447 ALNGTLAIASQKGKGTTFTIRLPLTFTIVQALLVETKNELFALPIISVQSVIRLDKETVD 1506 Query: 544 P-LAGGERVLEVRGEYLPIVELWKVFN--VAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 LA + + ++L T T V++++SG + A+LVD LI Sbjct: 1507 SLLASEQCLFCHENVNYRFIDLGAALGQDYPETSTSNTHYPVLLVRSGEFQAAILVDALI 1566 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 G ++V+K++ + I+ ATILGDG V LI+D+ AL ++ + A Sbjct: 1567 GSREIVIKSVGPQLGAIKEIAGATILGDGRVVLILDLPALIRKATQKTETSIA 1619 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 67/382 (17%), Positives = 128/382 (33%), Gaps = 69/382 (18%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F DEAD++L +E L L+ ++ + + R H++KGGA + L + Sbjct: 824 DPELLAVFLDEADDVLQAIETTLTDLRASPQESTPVQQLQRELHTLKGGARLANLTALGD 883 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK------------------ 106 +H +E+L+ A N++ +NL E D + E D+ + Sbjct: 884 LSHDLESLIITAIDKGFTDNSEFLNLLQEGHDRLAEMCDSLRHGAALLAANDLSSRIHGM 943 Query: 107 ------------------QSQEPDAASFDYICQALRQL--ALEAKGETPSAVTRLSVVAK 146 Q PD S +L A + + +++S+ A Sbjct: 944 AESLPYTEKMLPMPDELSQDDTPDPVSKAPSIDPNNELVAAFLEEADELLQASQISLSAW 1003 Query: 147 SEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG--------------- 191 + + + L LK G L L + + Sbjct: 1004 QKNFSSEQAPAEEFQRHLHTLKGGARLAGITLLADLAHHMETIASTIIEGKQNTESGLFG 1063 Query: 192 -----ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 D L + + ++ +IE + E + S K ++ A Sbjct: 1064 LLQHCLDRLCTLCEFAQNAVPLPSISDLLIEISRYNSEDLPSSQKSEQARLIHDQELPAA 1123 Query: 247 TGRVERE----------KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 T + E T + IRV + +D L+N E+ I + L Q+ + Sbjct: 1124 TLALPPEQKLHKTARPLAETGTPPVEQIRVRADLLDHLVNNAAEVNIFSTRLEQQIGTIR 1183 Query: 297 PVNHGDLITSMGQLQRNARDLQ 318 +N G++ ++ +L+ R L+ Sbjct: 1184 -LNLGEMERTVARLRSQIRRLE 1204 Score = 95.7 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 99/327 (30%), Gaps = 2/327 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA E + + +H + ++ E L I R+ H++KG G + E Sbjct: 630 DPEIATYFIEEAQEEMLSIAKHFSQWRQDSSQQEALKTIRRSFHTLKGSGRLVGAIDIGE 689 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +EN+L+ G +++ + + + + + L + Q A S + Q + Sbjct: 690 LAWAIENMLNRIMEGTIEIKPAVFEIIEGAQQALPQLLTLFTQGGGRPAESILALLQRAQ 749 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +A S V + E S K E +L Sbjct: 750 AVADNTPNLASSEVDSTLQAVEVEDSYSPPAKNSESSTGEKNSKHDPELTQEAQLAEQGK 809 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + S P +A A +T + + Sbjct: 810 FISGQHTSVSGHLSDPELLAVFLDEADDVLQAIETTLTDLRASPQESTPVQQLQRELHTL 869 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQ-LINLVGELVITQSMLAQRSSELDPVNHGDL 303 R+ + + +D+ + L + Q + + D + HG Sbjct: 870 KGGARLANLTALGDLSHDLESLIITAIDKGFTDNSEFLNLLQEGHDRLAEMCDSLRHGAA 929 Query: 304 ITSMGQLQRNARDLQESVMSI-RMMPM 329 + + L + ES+ +M+PM Sbjct: 930 LLAANDLSSRIHGMAESLPYTEKMLPM 956 >UniRef50_C5S733 CheA signal transduction histidine kinase n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S733_CHRVI Length = 797 Score = 523 bits (1347), Expect = e-146, Method: Composition-based stats. Identities = 248/543 (45%), Positives = 328/543 (60%), Gaps = 7/543 (1%) Query: 110 EPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKA 169 + D + A + E + + D + L++ Sbjct: 253 DAPGLQGDAVFGAAASATEPDQDELGYGFFEGAPGTEHGASDSTPDQTQAFGFQIEILES 312 Query: 170 GEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 + G D L PG + E F + S Sbjct: 313 DGYGFFRDAPGT-EAALDQEHSGYGLFGGSPGMDRVAAVAHQERLDDERGYGLFNSAPGS 371 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTT------RSNESTSIRVAVEKVDQLINLVGELVI 283 P+ A + +ERE + +SIRV+VEKVDQLINLVGELVI Sbjct: 372 PESRLDDDASAPISTAASPAMERESRAGNAPKRPATTDSSIRVSVEKVDQLINLVGELVI 431 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 T +MLA ++ LDPV H ++ + L+RN+RDLQE+VMSIRMMP+ +VF+R+PR+VRD Sbjct: 432 THAMLADSAAGLDPVVHERIMAGLSNLERNSRDLQEAVMSIRMMPISFVFNRFPRVVRDT 491 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A LGK+V L L+G TELDK LIER+ DPL HLVRNS+DHGIE PE RLAAGK G + Sbjct: 492 AASLGKRVTLKLIGEDTELDKGLIERLADPLNHLVRNSIDHGIERPEARLAAGKPETGEI 551 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAE 463 +L A H+GG++ +EV+DDGAGL RE++LAKAA QG+ + +N SD +V LIF GFSTAE Sbjct: 552 VLRASHRGGSVVVEVSDDGAGLKREKLLAKAAKQGIPMPDNPSDKDVWQLIFHAGFSTAE 611 Query: 464 QVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEV 523 +VTD+SGRGVGMDVV+RNI+ M G VE+ S G GT I I LPLTLAILDG+SVR+ +E+ Sbjct: 612 RVTDISGRGVGMDVVRRNIEDMNGRVEVDSTAGRGTHITIRLPLTLAILDGLSVRMGEEM 671 Query: 524 FILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVV 583 FILPL + ES+QPR + G RV+++ EYLP+V L VF+ + GI+V Sbjct: 672 FILPLTVIQESIQPRAEQFKTVVGKGRVVQINDEYLPLVSLHDVFSSGRPEPNLLDGILV 731 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 I+++ R A+LVD+L+ QHQVV+K+LE+NYRKV G+S ATI+GDG VALI+DV AL + Sbjct: 732 IVETNEGRAAVLVDELVAQHQVVIKSLETNYRKVEGVSGATIMGDGRVALILDVDALVRL 791 Query: 644 NRE 646 NR Sbjct: 792 NRR 794 Score = 148 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 82/231 (35%), Positives = 122/231 (52%), Gaps = 5/231 (2%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS+D+S FYQ FF+EA E LA ME LL L EAPD E LNAIFRAAHSIKGGAGTFGFS Sbjct: 1 MSIDMSQFYQVFFEEAGENLAAMESLLLELDVEAPDLETLNAIFRAAHSIKGGAGTFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E TH++E LLD R+ E+ ++++ FL+ D+++ QL A+++ +E + + +C Sbjct: 61 DMAEVTHILETLLDRLRKQELAPTVEMVDAFLQAGDVLKSQLQAHQEGEEYEDSRVTEVC 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ----SPRRIILSRLKAGEVDLLE 176 Q L +LA E + + + + +S + + + E L Sbjct: 121 QHLERLARADDAEGDVPASSAGEIRPTGTVEAESSVTHWRLAFEPAGIGQGTPDERRALF 180 Query: 177 EELGHLTTLTDVVK-GADSLSAILPGDIAEDDITAVLCFVIEADQITFETV 226 E LG L + D+ + L I +L F+ E Q+ +T+ Sbjct: 181 EALGELGRIQDIGAGETERCLWQLTSAAGRGAIEEILAFICEPGQVEIDTI 231 >UniRef50_D0MGB5 CheA signal transduction histidine kinase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGB5_RHOM4 Length = 770 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 178/475 (37%), Positives = 263/475 (55%), Gaps = 9/475 (1%) Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 + + + + A T + S + A Sbjct: 289 QPLPIGAVIERLQAIAEGKPAPARSGSTPAAATPEARTTPPATAPSSETADASRSTPAAS 348 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH-----G 301 T + R + +IRV V ++D L++LVGELV+ ++ L Q SEL Sbjct: 349 TPSGNGQAARRDQSTETIRVEVRRLDNLMDLVGELVLGRNRLLQLLSELSTDGDNAELLR 408 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 +L + Q+ +LQ +VM RM+ + VF+++PRLVRDLA + KQ+EL + G TE Sbjct: 409 ELADTTTQIDFITTELQSAVMHTRMVQIGRVFNKFPRLVRDLAREFNKQIELIIEGEETE 468 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 LDKSLIE I DPL HL+RN+ DHGIE PE R A GK+ G + L+A +G +I IE+ DD Sbjct: 469 LDKSLIEEISDPLVHLIRNAADHGIEDPETRRARGKSPTGRIRLAASQEGNHIVIEIEDD 528 Query: 422 GAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 GAG++ E+I AKA +GL + MSD E LIF GFSTA++V+ VSGRGVGMDVV Sbjct: 529 GAGIDPEKIKAKALEKGLITEKEATEMSDREALELIFRAGFSTAQRVSKVSGRGVGMDVV 588 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 K NI K+ G + + S G GT + LPLTLAI+ + VRV +E F +PL++V+E + Sbjct: 589 KTNITKLNGTISVHSVPGQGTRFTLKLPLTLAIIQSLLVRVGEEAFAIPLHSVIEVVGLE 648 Query: 539 EADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQ 598 ++ + G E V+ +R +P++ + ++ V G + VI+ R L+VD Sbjct: 649 SDTVYTIKGRE-VIRLRDTVIPLLRVGEMLQVPGWTYHPERAYAVIVGIAHHRLGLIVDD 707 Query: 599 LIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 LIGQ ++V+K L + +KVPG++ +TILGDG V +I+DV L + ++ + A Sbjct: 708 LIGQKEIVIKPLGNYLKKVPGVAGSTILGDGRVIMILDVGELVRMETQRLRGSEA 762 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 46/219 (21%), Positives = 89/219 (40%), Gaps = 2/219 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S ++ + ++F E E+ D+E LL L+ D + ++ IFRA H++KG +G Sbjct: 7 FSEEMREIVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRAVHTVKGTSGFLSLE 66 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L H E++L+ R+G + ++++ E D+M++ L ++ + I Sbjct: 67 QLSLLAHHFEDVLNRLRKGTLAFEPAMMDVLFEAFDLMKQLLHQVEERN-LQPIPLEDIL 125 Query: 121 QALRQLALEAKGETPSA-VTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + L+ LA E + T + S P QS S P+ A + E Sbjct: 126 RKLKALADEEAAAGSADKTTPTAPQEPSAPTPAQSASADPQEAAALEALAETLFSEEMRE 185 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA 218 + + + + + L L D ++ + A Sbjct: 186 IVESFIVETREIFEDLEHDLLQLEKTPDDRQLVDKIFRA 224 >UniRef50_C5BLL4 Putative CheA signal transduction histidine kinase n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLL4_TERTT Length = 2283 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 176/662 (26%), Positives = 288/662 (43%), Gaps = 27/662 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D F +EADEL+ +++ + + + D Q I R H++KGGA G + L E Sbjct: 1473 DQDILDIFLEEADELIEQLDEAVHAWEGDWSDLSQAEEIKRVLHTLKGGARLAGMTNLGE 1532 Query: 65 TTHLMENLLDEARRGEMQLNTDII-------NLFLETKDIMQEQ----LDAYKQSQEPDA 113 TH E+ L +++ + L +Q LD+ + S + A Sbjct: 1533 LTHNYESFL--IGSKLQEVDEPFFRTMHSYQDQVLSGVRAIQAFVAGDLDSAQASADVPA 1590 Query: 114 ASFDYICQALRQLALEAKG-ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV 172 + ++ G E + P GE Sbjct: 1591 EVTAEVTAEVQPGDASVSGAEVEEIPPVADAAPLQTVTPAAESNVVPFAPKPKAPDVGEF 1650 Query: 173 DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 + + ++ E+ + I +I + + S + Sbjct: 1651 TMPSPAATPGGQAIARKPSGPQEVIKVSAELLEELVNLAGETSINRARIEQQVSDFSNSL 1710 Query: 233 ST-PPVLKLAAEQAPTGRVEREKTTR------SNESTSIRVAVEKVDQLINLVGELVITQ 285 L EQ +E E + + +++ L L L+ + Sbjct: 1711 DDIDSTLFRLQEQLRRLDIETEAQVLFRQEQMAAHEDFDPLEMDRYSHLQQLSRSLIESA 1770 Query: 286 SMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAG 345 S L L N D T + Q R LQE +M RM+P + R R+VR ++ Sbjct: 1771 SDLIDLRETLTD-NIRDTETLLLQQSRINTTLQEGLMRSRMVPFSRLVPRLRRIVRQVSS 1829 Query: 346 KLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLIL 405 +LGK V L ELD+S++ER++ PL H++RN++DHGIE P+ RL AGK+ G ++L Sbjct: 1830 ELGKSVSFELDNVEGELDRSVLERMVPPLEHMLRNAVDHGIEAPDDRLGAGKSETGRIVL 1889 Query: 406 SAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQ 464 + +GG++ I + DDG G++ R+ KA +GL ++ +SD +V I GFSTAE+ Sbjct: 1890 TLGREGGDVIIRLADDGRGIDLRRVREKAIERGLMSADAGLSDFDVMQFILHAGFSTAEK 1949 Query: 465 VTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVF 524 VT +SGRGVG+DVV I+ +GG V I S G GT + LP T+++ + V + + + Sbjct: 1950 VTQISGRGVGLDVVTSEIKALGGSVTIDSAWGKGTEFIVRLPFTVSVNRALMVEIGQDTY 2009 Query: 525 ILPLNAVMESLQPREADLHPLAGGERV-LEVRGEYLPIVELWKVFN---VAGAKTEATQG 580 +PLN + ++ +L E E GE + L + + + A Sbjct: 2010 AIPLNTIEGIVRVSPFELEHYYTTEDARFEYAGENYQVRYLGSMLSNDILPQLDGHALPL 2069 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 V++++S A+ VD L+G +VVVK+L + V G+S AT++GDGSV +I+D AL Sbjct: 2070 PVLLVRSADNAMAVQVDNLLGSREVVVKSLGVQFSAVQGLSGATLMGDGSVVVILDPHAL 2129 Query: 641 QA 642 Sbjct: 2130 MR 2131 Score = 67.6 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 1/127 (0%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPE-APDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 ++ F EA LA M + ++ + + + RA H++KG A + + Sbjct: 804 LWEIFSSEAHSHLATMNAFIAKMEADAPLYSPPSDDFQRALHTLKGSAKMAQVTPIAAMA 863 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +E E ++ +N DI+ L+ + + L + + + D +L Sbjct: 864 EPLEAFAKELISYQVDINEDILQLYRDAVSYTAQALTQLEAGENLEIRQLDQFVARTAEL 923 Query: 127 ALEAKGE 133 A G Sbjct: 924 RELAVGH 930 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/305 (11%), Positives = 95/305 (31%), Gaps = 9/305 (2%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E+ ++++ + D + L + RA H++KG + E +EN+L+ Sbjct: 629 AGEVRETLDEYFPKWRANFQDQDSLVVVRRAFHTLKGSGRMVEAYDIGELAWSIENMLNR 688 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETP 135 + + ++ ++ + A+++ + + Q + A G+TP Sbjct: 689 VIDNTVNVGPAHGHMIELVLHVLPVLVTAFERRKRNPQKALCE--QYMAWAESLAAGDTP 746 Query: 136 SAVTRLSV-VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 + + + P + A E + + G + Sbjct: 747 AELASVPDGGHPQLPDLTAPPKKVVAAEQQQEPAAAEPETQADISGDEDDSDNENLVLWE 806 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREK 254 + + + +A + + + + T A+ P + Sbjct: 807 IFSSEAHSHLATMNAFIAKMEADAPLYSPPSDDFQRALHTLKGSAKMAQVTPIAAMAEPL 866 Query: 255 TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNA 314 + E S +V + + ++ L + V + + + + L + + Sbjct: 867 EAFAKELISYQVDIN--EDILQLYRDAVSYTAQALTQLEAGENLEIRQLDQFVAR----T 920 Query: 315 RDLQE 319 +L+E Sbjct: 921 AELRE 925 >UniRef50_C6NYF4 Signal transduction histidine kinase CheA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYF4_9GAMM Length = 664 Score = 522 bits (1346), Expect = e-146, Method: Composition-based stats. Identities = 185/660 (28%), Positives = 306/660 (46%), Gaps = 28/660 (4%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MSMD D + + EA ELL + L L+ L ++FRA H++KGGAG Sbjct: 1 MSMD-PDILRDYVSEARELLEQAQSDALALECAPDSDAVLASLFRAFHTLKGGAGFLDAD 59 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L E TH +E+LLD+ R + + I++ L+ D++Q LD + P+ D + Sbjct: 60 ALVEWTHHLEDLLDKLRSHVLPVTPTTIDVILKGLDVIQCMLDELGRGVYPNPGPSD-LG 118 Query: 121 QALRQLALEAK----------------GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIIL 164 Q + LA E P+ V Q + + + Sbjct: 119 QRICALASVEDVHTSPPESASENVRPIAEQPTGVESAESGTLQAWQKLKPDGKVGVYVER 178 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEA-DQITF 223 + + E +D + + V+ Sbjct: 179 VSEGKDKGAVCVESASKAGDDAASDTISDEEFEQVLDALYGHKAPGVVPPAERRVMDSQV 238 Query: 224 ETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 + V P + ER +T +++RV ++D ++N VGELV+ Sbjct: 239 ASTAVLPGALPQATAPAPVTSVAAVKTERPSSTSETPESTLRVESARLDSVMNQVGELVL 298 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 ++ H DL ++ D+Q +VM +RM P + +F + PR+VRD+ Sbjct: 299 LRNRFLSAMQTTIG-EHEDLARIAREMDLTVNDMQSTVMRLRMQPCKRLFQQLPRVVRDV 357 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 + +LGK+V L VG E+DK +++ + PL HLVRNSLDHGIE P R+ GKN + L Sbjct: 358 SRQLGKRVNLQFVGEDVEIDKKVVDALSAPLIHLVRNSLDHGIETPADRVMLGKNEIATL 417 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFS 460 +SA H G + IEV+DDG G++ +++ KA +GL E +++ + LIF PGFS Sbjct: 418 RISAVHLGDKVRIEVSDDGNGIDAQQVKQKAVEKGLIGQEEAARLTESDAIDLIFRPGFS 477 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 T + VT+ SGRGVGMDVVK+ Q + G +++ + GTGTTI + PLTLA+L + +R+ Sbjct: 478 TNDVVTEYSGRGVGMDVVKKTTQSLRGRLDVHTNLGTGTTIAMEFPLTLAVLPVLYLRLR 537 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQG 580 +V+ +P+++V + L+ + G + +P V+L ++ + + Sbjct: 538 RDVYAIPISSVSSLIDVDPQRLYQVQGRALYQAGPEQIVPFVDLGEILHQRPIQLGTEPT 597 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++ + G L+V +++G VVK ++ + AT+ G G V LI+D++ L Sbjct: 598 DGILTERG----LLVVSEVLGNEDSVVKPID-FLSESHWYQGATLSGKGEVVLILDIANL 652 >UniRef50_Q2SPH8 Chemotaxis protein histidine kinase and related kinase n=4 Tax=cellular organisms RepID=Q2SPH8_HAHCH Length = 2726 Score = 522 bits (1345), Expect = e-146, Method: Composition-based stats. Identities = 169/654 (25%), Positives = 309/654 (47%), Gaps = 39/654 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + Q F +EA+EL A +E+ E ++ +++ RA H++KGGA + + + Sbjct: 1952 DPEILQVFVEEANELQASLEREFNDWTREPRNSVHADSMSRALHTLKGGARLATLTNIGD 2011 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ---------SQEPDAAS 115 +E+++ +A + +L+ + + + ++ ++ K ++ A + Sbjct: 2012 LAQEIESIVKQAYDHKHELDDALRSEIEILFNRLKSEIGQVKNFYSSQQEAEAEAAAAEA 2071 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 +AL + ++ + E + AK+E Q Q +Q R+ A +D L Sbjct: 2072 PKSEPEALAERMVQMQREQAVPAVKKEEPAKTEMQPAQPAAQRQTAAETVRVSANLLDNL 2131 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 G + +++ S T E ++ + Sbjct: 2132 VNLAGETSITRGLLEQQIS-----------------------DFTYTLEEMQSTIDRLRE 2168 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 + ++ E EK + + +++ + L L + S L + Sbjct: 2169 QLRRMDMETEAQVLFRMEKESGVKYEDFDPLEMDRYSSIQQLSRALSESSSDLTDLRETM 2228 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 D T + Q R +LQE +M RM+P + R R++R ++ +LGK+ + + Sbjct: 2229 MD-KARDAETLLLQQSRINTELQEGLMKTRMVPFTSIVPRLRRIIRQVSSELGKKADFEV 2287 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 ELD++++ER++ PL H++RN++DHG+E+PE+R A GK+ G + LS +GG++ Sbjct: 2288 YNPEGELDRTVLERMLAPLEHMLRNAIDHGVEMPEQRRAKGKSETGRIELSVGREGGDVV 2347 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 + ++DDGAG+N + + KA GL +SD ++ IF GFSTAE+VT +SGRGVG Sbjct: 2348 LILSDDGAGINVDAVRRKAIKSGLIDEGTHLSDHDMLQFIFQAGFSTAEKVTQISGRGVG 2407 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV I+++GG V I SK G GT + LP T+++ + V ++ + +PLN + Sbjct: 2408 MDVVASEIKQLGGRVTIDSKPGHGTRFIVHLPFTVSVNRALMVNTGEDYYAIPLNTIEGI 2467 Query: 535 LQPREADLHPLAG-GERVLEVRGEYLPIVELWKVF---NVAGAKTEATQGIVVILQSGG- 589 ++ +L + E G+ + L + + + + V++++ GG Sbjct: 2468 VRVSTYELEEYYKPNAPLYEYAGQKYRLQYLGSLLKSEHHPKLQGQPLPLPVILVRGGGD 2527 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 + AL VD L+G ++VVK L + + V G+S ATILGDGSV +I+D+ AL Sbjct: 2528 QPLALQVDSLMGSREIVVKGLGTQFSSVRGVSGATILGDGSVVVILDLPALLRS 2581 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 57/359 (15%), Positives = 116/359 (32%), Gaps = 32/359 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA +++ + + E + E L + R H++KGGA + + Sbjct: 1468 DPEMVEIFLEEAQDIIQRTGETMHSWSEELGNLEHLKELQRDLHTLKGGARMAEIKSIGD 1527 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G + ++ L +E D + +DA Q+Q A + + Sbjct: 1528 LAHELETLFERMTEGRLAPEPAMVGLVMECHDRLAGMVDAVAQNQVASPAR--DLIGRVH 1585 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +A A V A E + + P+ + G + E Sbjct: 1586 DMAQGAGHHYADGEDDYIVDAHPEVEAAAETTSEPQVEETAEEPEGLAGIEEITAEPAPV 1645 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK----- 239 ++ + L ++ + V + + I L+ Sbjct: 1646 EEAPIENPVYDISELDQELVSIFLEEANELVDSTARNLQSWLGELENIEHVKELQRALHT 1705 Query: 240 -----LAAEQAPTGRVEREKTTRSNESTSIRVAVE-KVDQLI----NLVGELVI------ 283 AE P G + E T R E + L+ + + E+V Sbjct: 1706 LKGGARMAEIKPIGDLAHELETLFEGIVEGRFLAEPSLSDLMLACHDRLAEMVDSVTSNS 1765 Query: 284 ---TQSMLAQRS------SELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVF 333 + LAQ+ +L D ++ +++R + LQE+ + + +F Sbjct: 1766 PVRAANDLAQQVIKYCAQHDLAAKGAPDHEDTIAEIEREQQSLQEAALETSDEDLRSIF 1824 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 57/333 (17%), Positives = 107/333 (32%), Gaps = 35/333 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+EL+ ++L E + E + + RA H++KGGA + + Sbjct: 1661 DQELVSIFLEEANELVDSTARNLQSWLGELENIEHVKELQRALHTLKGGARMAEIKPIGD 1720 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G + +L L D + E +D+ S P A+ D Q ++ Sbjct: 1721 LAHELETLFEGIVEGRFLAEPSLSDLMLACHDRLAEMVDSV-TSNSPVRAANDLAQQVIK 1779 Query: 125 -----QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 LA + + + + +S + S R I +D + + Sbjct: 1780 YCAQHDLAAKGAPDHEDTIAEIEREQQSLQEAALETSDEDLRSIFLDESRDIMDAVIDCF 1839 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 D + L L + + + +T Sbjct: 1840 DRWKANPDNITPTKELVRDLQTLNGGAKLANIDSVHALTEALTERM-------------- 1885 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL---------INLVGELVITQSMLAQ 290 E G+ + + SIR +DQ+ L+ EL S Sbjct: 1886 ---ESVVDGKHQVPDELITLVDRSIRYIGRLLDQIEQLEQPEVPNELIRELKEVGSGDEL 1942 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMS 323 +SE +++ + A +LQ S+ Sbjct: 1943 PASEFALDVDPEILQVFVE---EANELQASLER 1972 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 98/324 (30%), Gaps = 18/324 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA+E+LA + + Q D L I RA H++KG G + L E Sbjct: 601 DDEIVEIFVEEAEEVLATIHNYFPSFQSNPDDQVALAEIRRAFHTLKGSGRLVGATTLGE 660 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +EN+L+ G + ++ L + + E ++ +K QE + Sbjct: 661 LAWSVENMLNRVIDGSITATLEMFELLEGVINKLPELIERFKTGQEINDVEQFVAKAEAL 720 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A E +A V K EP + + E Sbjct: 721 AAARRLSREKSAASDIDLSVPKEEPAPAPIEEPVAASEPEAPVVEERQPEPIEPPSIPEP 780 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + ++ + I ++ I + E + + + + Sbjct: 781 VAETIEVPELEEEDEDDMIDDEIIEIFVEEAAEVLDTIGQYLPSYLASYDNQEALIEVRR 840 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 A + + LVGEL + L R + D+ Sbjct: 841 AFHTLKGSGRLVGA-----------------TLVGELAWSVENLLNRIIDGAIFMSQDIG 883 Query: 305 TSMGQLQRNARDLQESVMSIRMMP 328 M + + DL E +R P Sbjct: 884 ELMQAVTKILPDLVED-FKLRRKP 906 Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 29/249 (11%), Positives = 73/249 (29%), Gaps = 3/249 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F EA +++ + + + + + R H++KGGA G + + Sbjct: 1304 DPELADVFLQEAQDIIQSSADVMQQWSQDLHNIALVQQLQRDLHTLKGGARLAGIPPIGD 1363 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H +E+L + + + + NL L D + +D+ ++ + AL Sbjct: 1364 LSHELESLFEGIVEQRVTPDEEASNLSLLAHDTLAGMVDSVTATRTC--NDAQDLIDALH 1421 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + V ++ +L + + +++E L Sbjct: 1422 AYLSGERSSEDEEDEGDEVSYDETSLPTMDFNEEEDIPVLEEVAPLDPEMVEIFLEEAQD 1481 Query: 185 LTDVV-KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 + + S S L ++ L + ++ + + E Sbjct: 1482 IIQRTGETMHSWSEELGNLEHLKELQRDLHTLKGGARMAEIKSIGDLAHELETLFERMTE 1541 Query: 244 QAPTGRVER 252 Sbjct: 1542 GRLAPEPAM 1550 Score = 96.9 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 52/381 (13%), Positives = 115/381 (30%), Gaps = 57/381 (14%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D F DE+ +++ + + + + R ++ GGA + Sbjct: 1817 DEDLRSIFLDESRDIMDAVIDCFDRWKANPDNITPTKELVRDLQTLNGGAKLANIDSVHA 1876 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 T + ++ G+ Q+ ++I L + + LD +Q ++P+ + + + L+ Sbjct: 1877 LTEALTERMESVVDGKHQVPDELITLVDRSIRYIGRLLDQIEQLEQPEVPN--ELIRELK 1934 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR--------------------IIL 164 ++ + + +E + Q+ L Sbjct: 1935 EVGSGDELPASEFALDVDPEILQVFVEEANELQASLEREFNDWTREPRNSVHADSMSRAL 1994 Query: 165 SRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL------------ 212 LK G +G L + + D +I + Sbjct: 1995 HTLKGGARLATLTNIGDLAQEIESIVKQAYDHKHELDDALRSEIEILFNRLKSEIGQVKN 2054 Query: 213 ---------------CFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTR 257 + E + + P +K + + R Sbjct: 2055 FYSSQQEAEAEAAAAEAPKSEPEALAERMVQMQREQAVPAVKKEEPAKTEMQPAQPAAQR 2114 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 + ++RV+ +D L+NL GE IT+ +L Q+ S D ++ ++Q L Sbjct: 2115 QTAAETVRVSANLLDNLVNLAGETSITRGLLEQQIS--------DFTYTLEEMQSTIDRL 2166 Query: 318 QESVMSIRMMPMEYVFSRYPR 338 +E + + M V R + Sbjct: 2167 REQLRRMDMETEAQVLFRMEK 2187 Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 78/214 (36%), Gaps = 1/214 (0%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +EA E+L + Q+L + E L + RA H++KG G +++ E +EN Sbjct: 807 FVEEAAEVLDTIGQYLPSYLASYDNQEALIEVRRAFHTLKGSGRLVGATLVGELAWSVEN 866 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 LL+ G + ++ DI L I+ + ++ +K ++P + Y+ QA +A Sbjct: 867 LLNRIIDGAIFMSQDIGELMQAVTKILPDLVEDFKLRRKPSHNTQPYMDQA-HAIAKGEI 925 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 + S A EP + + + + + T + Sbjct: 926 PKPLKLDQDASATAAGEPTLDIDPALKDIFKAETESHLETLATFTAKAAANGEPTPITDE 985 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFET 225 L G I + V+ ++ E Sbjct: 986 ISRAMHTLKGSANTAGIEPIATVVVPLEKFVKEA 1019 Score = 74.1 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 44/333 (13%), Positives = 93/333 (27%), Gaps = 26/333 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F E ++L D E+ L + E + + ++ GA G + E Sbjct: 1090 DPQLINLFLTEGVDILLDAERILNEWSQDPNSKEDQHKLVTELTTLSRGAEVAGLEDVAE 1149 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 + +E + A G + + D++ +D + Q L Sbjct: 1150 LSRALETAYELAEAGAANTDDRFFTIAKRGHDVLISMMDQVAAG--LATQPDASLIQELY 1207 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA + V ++ VA+ E + + +L +++ Sbjct: 1208 ALAKPVESAPAEDVPPVAEVAEEESLAPAANAADDEIPLL------------DDVIIEEA 1255 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 D + + LP + + +A IE + V ++ E Sbjct: 1256 EEDDLAEDINFDIGLPEEPEAIEPSASFMEEIEETPAPVASGGVVYELDPELADVFLQEA 1315 Query: 245 APTGRVEREK-TTRSNESTSIRVAVEKVDQLINL-----------VGELVITQSMLAQRS 292 + + S + +I + + L L +G+L L + Sbjct: 1316 QDIIQSSADVMQQWSQDLHNIALVQQLQRDLHTLKGGARLAGIPPIGDLSHELESLFEGI 1375 Query: 293 SELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 E + + +SV + R Sbjct: 1376 VEQRVTPDEEASNLSLLAHDTLAGMVDSVTATR 1408 Score = 46.0 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 20/167 (11%), Positives = 52/167 (31%), Gaps = 1/167 (0%) Query: 13 FDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENL 72 EA L + ++ D ++ ++ + SI+GG + Sbjct: 447 IREARNGLEQAKTDIVEYIASHWDRSEIESVPKLLQSIRGGLRIIPLERAADLLDASARY 506 Query: 73 L-DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 + D + + + ++ + ++ L+ + + + ++L QL Sbjct: 507 IQDRLLDSDQSPDWNQLDTLADAITSIEYYLERLSEGSQDNELILQVAEESLAQLGYPVG 566 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 A ++ A + +S L + E+ + E E Sbjct: 567 DAVAIAPQTVAGTAPTMSAPPESSRDKASDKELIDDEIVEIFVEEAE 613 >UniRef50_Q3BQK3 Two-component system sensor histidine kinase-response regulator hybrid protein PilL n=5 Tax=cellular organisms RepID=Q3BQK3_XANC5 Length = 2405 Score = 522 bits (1344), Expect = e-146, Method: Composition-based stats. Identities = 175/647 (27%), Positives = 293/647 (45%), Gaps = 28/647 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +E +LL + + ++ D + LN + R H++KGGA G + + + Sbjct: 1640 ELVDIFVEEGRDLLDHCDGLIARMREVPGDRDVLNGLQRDLHTLKGGARMAGINAIGDLG 1699 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 H +E+LL+ ++ D + LF D + + L + + +A Sbjct: 1700 HAIESLLEAVAANRTDIDRDDVRLFERGFDRLHQLLT--RTGMHRAVTMPTDLVEAFETR 1757 Query: 127 ALEAKGETPSAVT----RLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 PS + V + L R++ +V + + L L Sbjct: 1758 TRGRNAAPPSDADVRAIAKASVEPAPLSAPVPVEGQAEEDFLPRVQQEQVRVRADLLDRL 1817 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 V S G DQ+ +E +I + Sbjct: 1818 VNHAGEVAIYRSRLEQQLGAFRGAMGELDRTNARLRDQLRRLDLETEAQIVARYQREQDQ 1877 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 +E +++ L L L + + L L+ + Sbjct: 1878 GDRTFDPLE----------------LDRFSTLQQLSRALNESAADLGGLQGVLEDL-SRQ 1920 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + Q R + +LQ+ +M RM+P + + R R+VR A GKQV L L G+ EL Sbjct: 1921 YDGLLQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAASDTGKQVHLVLEGTQGEL 1980 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++R++ PL H++RNS+ HG+E PE+R AGK G++ + +G I +EV DDG Sbjct: 1981 DRNVLDRMVAPLEHMLRNSVAHGLETPEQRRDAGKPEEGSIAIRLRREGSEIVLEVADDG 2040 Query: 423 AGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AGL+RE I + +GL + +S+ E+ LIFA GFST+EQV+ ++GRGVGMDVV+ Sbjct: 2041 AGLDREAIRRRGEERGLIEPGQELSEAELDNLIFASGFSTSEQVSQLAGRGVGMDVVRNE 2100 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++++GG V+I S +G G T + LP TLA+ + VR+ + F +P+ +V + A Sbjct: 2101 VRQLGGSVDIHSVRGQGATFTLRLPQTLAVTQAVFVRIGETTFAVPVGSVSGIGRISRAR 2160 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQLI 600 GG GE + +L + A A+ + Q ++++++G R A+ +DQ++ Sbjct: 2161 YESGEGG---YHYAGEEYVLHDLGSLVGQAAARADGQAQVPLLLVRAGDLRAAVAIDQVL 2217 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 G +VVVK + VPGI ATI GDG V +I+DV+ L Q Sbjct: 2218 GNREVVVKPVGLQIASVPGIYGATITGDGRVVVILDVAPLVRRFLAQ 2264 Score = 76.1 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 90/280 (32%), Gaps = 10/280 (3%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +E DE L ++ Q L V + + E L I R H++KG G SVL E + +E Sbjct: 740 VFLEEFDEELVNLGQLLPVWRAAPTNPEALRPIRRVFHTLKGSGRLVGASVLGEFSWKIE 799 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYICQALRQLAL 128 ++L+ + ++++ +++ + A + D I + + Sbjct: 800 SMLNRVLDNSRPASPAVVSMVELAYEVLPQFNAALRDQGRISADLPEIQGIAERVAAGEE 859 Query: 129 EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV 188 +A +V + S + S L+ + L + Sbjct: 860 VYYVPAAAAPVAEAVAIPAAAAGVFVASGGTPASVDSVLREILEAEVATHLDTVNGWLHA 919 Query: 189 VKGADSLS--------AILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + L+ + G A D+ + A+ + S S + L Sbjct: 920 SQAEPQLATEDVLRAVHTMSGAFAMTDVPEITLVTTPAESYVKRLLAASVTPSAEGLEAL 979 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE 280 A A + S E++ L++ + E Sbjct: 980 TATAAAIATTVTALRADAPLIPSFAPLTERLRTLVDSLPE 1019 Score = 47.6 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 72/270 (26%), Gaps = 13/270 (4%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E L + L Q E + RA H++ G + T Sbjct: 898 LREILEAEVATHLDTVNGWLHASQAEPQ--LATEDVLRAVHTMSGAFAMTDVPEITLVTT 955 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E+ + + + + + T + + A + P SF + + LR L Sbjct: 956 PAESYVKRLLAASVTPSAEGLEALTATAAAIATTVTALRA-DAPLIPSFAPLTERLRTL- 1013 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 + DE +P + + E+ ++ +L Sbjct: 1014 --------VDSLPEAQWPPQVFLDELDDVDAPSATVDGSDASIELTGAQDLSQYLDAGAL 1065 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 S + DD+ + + EA+ + + A Sbjct: 1066 PSDAPASAQDAEDAQLQPDDVPIAVDELAEAEAEHESALALDAPAPHAVDDAGHAAVHED 1125 Query: 248 GRVEREKTTRSNESTSIRV-AVEKVDQLIN 276 E S++ + V E D L + Sbjct: 1126 VHASAESVPASSDDALVPVGDSELADALHD 1155 >UniRef50_B9MKK5 CheA signal transduction histidine kinase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MKK5_ANATD Length = 633 Score = 521 bits (1343), Expect = e-146, Method: Composition-based stats. Identities = 191/648 (29%), Positives = 329/648 (50%), Gaps = 23/648 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFS 60 M ++ F EA E+++ +E+ + L+ + + + R H++KG + GF Sbjct: 3 EMQKDPMFEVFISEAKEIVSSLERIFIELKEGNRNLDIAVAEALRFFHTLKGSSAMMGFD 62 Query: 61 VLQETTHLMENLLDEARRGEMQLN--TDIINLFLETKDIMQEQLDAYKQSQEP-DAASFD 117 + + H +E++ R + I L+ D + Q++ + SQ+P DA + Sbjct: 63 DISKICHRVEDIFVCMRDEGKLPTNLDNFILNMLKLIDFLTIQINCIENSQQPQDAENIK 122 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + + + E + + + E E ++ + + ++ L Sbjct: 123 EVLEKIETSLAENNRVQAESEKKYHIRLLFEEGWEMENLRAFLIVQNLKQYVNVLEYLPS 182 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 ++ ++ +K +I ED + F D E E + Sbjct: 183 DIESNMASSEKIKKDGFFISIKTLLKKEDVVKLFENFAWVKDIKIEEVSEKASLTKEISS 242 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 + I V +EKVD+LI+L+GE+VIT SM+ Q E+ Sbjct: 243 YQNVTHS---------------IHKLINVNIEKVDRLIDLIGEVVITFSMIVQH-KEVKT 286 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + Q+ + R+LQE VMS+RM+P+ F R R + +++ KL K V + + G Sbjct: 287 DENSSFKNLTLQMSKLIRELQEVVMSMRMLPLSSTFQRLKRTIIEMSAKLQKPVNVHITG 346 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 TELDK LIE + DPL HLVRN++DHGIE E+RL GK+ GN+ +SA++ G + I Sbjct: 347 EETELDKVLIEHLTDPLIHLVRNAVDHGIEDKEERLKKGKDMTGNVYISAKNSGSEVVIS 406 Query: 418 VTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 + DDG GLN+E+IL KA +GL +++ +DE+ LIF PGFST E+ T+ SGRGVG+D Sbjct: 407 IEDDGRGLNKEKILQKAFERGLITSPDDIIEDEIFELIFQPGFSTKEEATEYSGRGVGLD 466 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 +VK ++QK+GG + ++S++ GT I +PLTLAI+DGM + V +F++PL++++E+ + Sbjct: 467 IVKNSVQKIGGRIFVESEKDRGTRFTIRIPLTLAIIDGMLIDVDGNIFVVPLSSIVETFK 526 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIV-VILQSGGRRYALL 595 + + L + RG +++L K+F + + +++ +G + LL Sbjct: 527 LEKQQIV-LENEIPFVYRRGICFGVIDLNKMFYGKDILDKERPFYLGILVTNGEKNGVLL 585 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 VD +I Q Q+V+K L + ++V GIS T++G G++A I+D+ AL Sbjct: 586 VDNMISQQQIVIKTLPAILKQVRGISGCTLIGSGNIAFILDIDALLER 633 >UniRef50_UPI0001C312B4 CheA signal transduction histidine kinase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312B4 Length = 675 Score = 520 bits (1341), Expect = e-146, Method: Composition-based stats. Identities = 201/675 (29%), Positives = 331/675 (49%), Gaps = 36/675 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVL 62 MD S++ F E+ E L ++ ++ ++ D + ++ IFR AHS+KG + T GF+ + Sbjct: 1 MDTSEYLPMFLAESREHLQELNLAVVRIEETPDDRDTVDEIFRIAHSLKGMSATMGFAAI 60 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 TH ME++ + R+ L + +++ + D ++ ++ + + + Sbjct: 61 AALTHQMEDVFELLRQRADGLPREAVDVLFKCLDALEAAVEEIATDG-AEQLDPAALIEQ 119 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII-----LSRLKAGEVDLLEE 177 L+ L E E + E + + + + A + + Sbjct: 120 LKGLIRERTPEQELDKIGGVDLPDLPTVRELADGSRVVHVAADLSDEALMPAVRAFMFFQ 179 Query: 178 ELGHLTTLTDVVKGAD--------SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 L L L + D L A L D + I A V + + + + + Sbjct: 180 ALAELGELVGSIPAQDGVEQFQGTRLEAWLASDREDHVIEAAAAGVSDVEHVAVQEAQDD 239 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNEST---------------SIRVAVEKVDQL 274 + L A A V + + ++RV E++DQL Sbjct: 240 LMPPSIETLSAAHADAEPALVGGPAVDHAAPARRVATNHAAGGAHAGATVRVDAERLDQL 299 Query: 275 INLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFS 334 ++ +GELVI ++++ + + D L ++ + R+++ LQ VM +RM+P+E VF Sbjct: 300 MHFMGELVIHRTVVETLAGDADVPG---LQQAIQDMARSSQALQAMVMQVRMIPVEAVFL 356 Query: 335 RYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLA 394 R+PRLVRDL+ KL K+VEL LVG TELD+++++ + DPL HLVRN+LDHG+E P++R A Sbjct: 357 RFPRLVRDLSSKLSKEVELQLVGQETELDRTVVDALGDPLVHLVRNALDHGLEPPDEREA 416 Query: 395 AGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENM---SDDEVA 451 AGK G L +SA H GGN+ I V DDG G++ ++ KA +GL E + A Sbjct: 417 AGKPRTGVLEISARHAGGNVVISVRDDGRGVDPAKVAQKAFERGLISEEAIPAVDSQRAA 476 Query: 452 MLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAI 511 L+F GFSTAE +D+SGRGVGMD V+ I+++GG V + S+ G G T I LPLTLAI Sbjct: 477 ELLFTAGFSTAESTSDISGRGVGMDAVQAKIRELGGEVIVDSEFGVGMTASIRLPLTLAI 536 Query: 512 LDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVA 571 + + V F +PL+ V +L+ + + +A G+R+L +R LP+++ + Sbjct: 537 MSALLVEAEGMPFAVPLDRVERTLRLEDHAVRSVA-GQRMLVLRDGVLPLIDAGEALAGR 595 Query: 572 GAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSV 631 + VI++ RR AL V L+GQ ++V + L +S +L +G + Sbjct: 596 VVPSGEAHDHAVIVRGRDRRLALAVGTLVGQRELVTRPLPPEVSDRAAVSGGAVLSNGEI 655 Query: 632 ALIVDVSALQAINRE 646 +LIVD AL A E Sbjct: 656 SLIVDCDALTARATE 670 >UniRef50_D2UEX4 Probable two-component system sensor histidine kinase-response regulator hybrid protein pill n=1 Tax=Xanthomonas albilineans RepID=D2UEX4_XANAL Length = 2020 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 177/652 (27%), Positives = 303/652 (46%), Gaps = 9/652 (1%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 S + F +E +LL ++ + L+ D + L + R H++KGGA G + Sbjct: 1232 FSDLDRELVDIFVEEGKDLLDHCDRLVAELRAAPQDRDLLGGLQRDLHTLKGGARMAGIN 1291 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEP--DAASFDY 118 + + H +E+LL+ +L+ + D + + L + D Sbjct: 1292 AIGDLGHGIESLLEAVAANRTELDRRDVQSLERGFDRLHQLLTLTGNHRAVAKPVDLIDA 1351 Query: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE 178 R + E +V A+ + LE E Sbjct: 1352 FAARTRAYGVMRASEADYSVAEADHAAEPATSTGSQTWSASVAPAALSAPLPLEGALENE 1411 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDI-TAVLCFVIEADQITFETVEVSPKISTPPV 237 + + V+ + L L E I + L + A + +E + + Sbjct: 1412 ATIARPMQEQVRVSADLLDRLVNQAGEVAIYRSRLEQQLGAFRGAMGELERTNARLRDQL 1471 Query: 238 LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDP 297 +L E ++ + + +++ L L L + + L S LD Sbjct: 1472 RRLDLETEAQIVARYQREQDQTQQNFDPLELDRFSTLQQLSRALNESAADLGGLQSVLDD 1531 Query: 298 VNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVG 357 + + + Q R + +LQ+ +M RM+P + + R R+VR A + GK V L+L G Sbjct: 1532 LA-RQYDSLLQQQARVSSELQDGLMRARMVPFDGLVPRLRRVVRQAASETGKHVHLSLDG 1590 Query: 358 SSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIE 417 + ELD+++++R++ PL H++RNS+ HG+E+PE+RL AGK+ G + + +G I +E Sbjct: 1591 THGELDRNVLDRMVAPLEHMLRNSVAHGLEMPEQRLVAGKSEDGEIAIRLRREGSEIVLE 1650 Query: 418 VTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMD 476 V DDGAGL+RE I +A +GL +E +SD ++ LIFAPGFST +QV+ ++GRGVGMD Sbjct: 1651 VADDGAGLDREAIRRRAEQRGLIAAEAVLSDAQLDALIFAPGFSTYDQVSQLAGRGVGMD 1710 Query: 477 VVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQ 536 VV ++++GG V+I S +G G T + LP TLA+ + V++ D F +P+ +V + Sbjct: 1711 VVCNEVRQLGGSVDIHSVRGQGVTFTLRLPQTLAVTQAVFVQIGDTTFAVPVASVSGIGR 1770 Query: 537 PREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA-TQGIVVILQSGGRRYALL 595 GG GE + +L + A A+ E Q ++++++G R A+ Sbjct: 1771 IGRERFEAAHGG---YRYSGEEYTLYDLGSLLGQAPARAEGLAQVPLLLVRAGDLRAAVA 1827 Query: 596 VDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 +DQ++G ++VVK + VPGI ATI GDG V +I+D++ L Q Sbjct: 1828 IDQVLGNREIVVKPVGLQIASVPGIYGATIAGDGRVVVILDIAPLVRRYLAQ 1879 Score = 83.0 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 6/268 (2%) Query: 9 YQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHL 68 F +E DE L ++ Q L + + L I R H++KG G VL E + Sbjct: 755 RAVFLEEFDEELVNLGQLLPAWRAAPSYMDSLRPIRRVFHTLKGSGRLVGACVLAEFSWK 814 Query: 69 MENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL 128 +E++L+ G ++ ++ + + + Q +A + A D + + ++A Sbjct: 815 IESMLNRVLDGARPVSPAVVAMVEQAY-ALLPQFNAALRGDGVLHADLDALQAVIERIA- 872 Query: 129 EAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV 188 GE V A + + S IL A ++ + L Sbjct: 873 --AGEEAYYVVASPATADAPRVGTPASVDSVLLEILDAEVATHLETIHAWLQAAP--QPA 928 Query: 189 VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTG 248 + + G A ++ + A+ + + V LA Sbjct: 929 TEALLRAVHTMSGAFAMTEVPEITAVTGPAESYVKRALAAGIVVDAEGVRALADAGDAIA 988 Query: 249 RVEREKTTRSNESTSIRVAVEKVDQLIN 276 E S +++ L++ Sbjct: 989 ATIEELQAPSPLIPRFTELAQRLQALVD 1016 Score = 68.0 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 76/276 (27%), Gaps = 18/276 (6%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E L + L A A+ RA H++ G + T Sbjct: 902 LLEILDAEVATHLETIHAWLQAAPQPAT-----EALLRAVHTMSGAFAMTEVPEITAVTG 956 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL- 126 E+ + A + ++ + + + D + ++ + P F + Q L+ L Sbjct: 957 PAESYVKRALAAGIVVDAEGVRALADAGDAIAATIEELQA-PSPLIPRFTELAQRLQALV 1015 Query: 127 -----------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 A + + PSA + +S P E + + + + + Sbjct: 1016 DTLPQVQWPTIADDEDEDAPSAQHEDGLDPQSLPVVEFTAADDLSTFLDDTAHLPDAARV 1075 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 + + H + A S D+A A + + Sbjct: 1076 ADTVAHDCSGVAEADAAPSAQLQHTVDVAHAHANQSEQDAHVASSMPQGDDASVAAVMAG 1135 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKV 271 + A + R ++ V +++ Sbjct: 1136 ARGEDILPVATVPDIAAMPAGREAGDQTVLVQDDQL 1171 Score = 46.4 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 37/331 (11%), Positives = 88/331 (26%), Gaps = 13/331 (3%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E DE+L + + E D ++ R H ++ +E L Sbjct: 19 ELDEILRQVRGEIEAFVEEPNDTGRMGFCARYLHQVQATLRMVELYASAMVAEELELLAV 78 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK-GE 133 + G + + ++ + L+ + + +R L E+ GE Sbjct: 79 AVQNGHTLDRDEACATLMRGTVLLPDYLERLRDGHRDIPIVLLPLLNEIRTLRGESGLGE 138 Query: 134 TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD 193 + S+ + + +R R G ++++ D Sbjct: 139 SALLALSPDASTASQAELDHARGSISGRNRELLDTVGT-----------AVKEELLRVKD 187 Query: 194 SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE 253 +L L + A + + + R E Sbjct: 188 ALDLHLRTGADIAALQAQVAELASVADTLGVMGLEVARSVVVQQRDALRSIVDGERQADE 247 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGEL-VITQSMLAQRSSELDPVNHGDLITSMGQLQR 312 + V DQ+ L + V + A+ L+ + + + Sbjct: 248 ALLLDIAGALLYVDASLDDQVAYLGASVDVHDDASAAEARRTLEALAQEAIANFGNAREH 307 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 ++ + R++ + + + +R L Sbjct: 308 VVAFIETNWDHERLVEVPRLLAEVAGALRML 338 >UniRef50_Q4K4F2 Sensor histidine kinase/response regulator ChpA, putative n=4 Tax=Bacteria RepID=Q4K4F2_PSEF5 Length = 1969 Score = 520 bits (1339), Expect = e-146, Method: Composition-based stats. Identities = 173/650 (26%), Positives = 304/650 (46%), Gaps = 33/650 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E +++ L Q E +++ + R H++KGGA + + + Sbjct: 1208 DPELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVETLLRDLHTLKGGARMVEIAPIGD 1267 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + G +Q + + L ++ D + + LDA + Q + + + Sbjct: 1268 LAHELEFLFEGLSAGLLQPSPVLFTLLQKSHDRLAQMLDAARAGQ-----PIEPAQKLID 1322 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + + V + + ++P+ +++ + ++ A +D L G + Sbjct: 1323 AIHDLSHPRVATGVAAEAALPSTKPEPAAPAAEAAVAGDMVKVSAELLDDLVNLAGETSI 1382 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 ++ + + G++ IE + ++ + ++ AE Sbjct: 1383 FRGRIEQQVNDARTALGEM---------ETTIERMRDQLRRLDTETQGRILSRQQVEAE- 1432 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 R + +++ QL L L + S L LD NH D Sbjct: 1433 ------------RLGYEEFDPLEMDRHSQLQQLSRALFESASDLLDLKETLDRRNH-DAE 1479 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + Q R +LQE +M RM+P E + R R+VR +A +LGK VE + + E+D+ Sbjct: 1480 NLLQQQGRINTELQEGLMRTRMVPFERMVPRLKRIVRQVAEELGKDVEFVVGNAEGEMDR 1539 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 +++ER++ PL H++RN++DHG+E E RLAAGK + G + L +GG++ ++ DDGAG Sbjct: 1540 NVLERMVAPLEHMLRNAVDHGLESAEARLAAGKPAQGRISLDLSREGGDMIFDMRDDGAG 1599 Query: 425 LNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 + E + KA +GL E +SD EV I PGFSTAE++T +SGRGVGMDVV ++ Sbjct: 1600 VPLEAVRKKAIKRGLLDPEAQLSDREVLQFIMQPGFSTAEKITQISGRGVGMDVVHEEVR 1659 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG + I S G G RI LP T+++ + V+ ADE + +PLN V ++ A+L Sbjct: 1660 QLGGSMSIDSVAGQGVHFRIRLPFTVSVNRALMVQCADEQYAIPLNTVEGIVRVLPAELD 1719 Query: 544 PLAG-GERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVDQL 599 E G+ + L ++ + + V+++ +R A+ VD Sbjct: 1720 GYYQLDPPRYEYAGQSYQLCYLGELLHTVPRPKLLGQVQPLPVLLVHCNEQRIAVQVDTT 1779 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 G ++VVK+L + V G+S ATILGDG V LI+D+ A + Q Sbjct: 1780 AGTREIVVKSLGPQFAAVQGLSGATILGDGRVVLILDLLAHIRALQAQAP 1829 Score = 104 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 53/370 (14%), Positives = 117/370 (31%), Gaps = 48/370 (12%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA ++L +Q L + + L+++ R H++KGGA + + E Sbjct: 1066 DDEIVEIFLEEAVDILESADQALQRWLADPDNGAPLSSLQRDLHTLKGGARMAEVAPVAE 1125 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLET-----------------KDIMQEQLDAYKQ 107 +E+L + + + L L + D + Q++A + Sbjct: 1126 LAQELESLYEGLVDRRYSHSQHL-GLLLRSSHEQLALLLEQLQGQHPLDESRAQIEAVRS 1184 Query: 108 --------SQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ-S 158 + +L E + + + Q R + Sbjct: 1185 YRQQAASTGEVAQGTVEADRAAQDPELLEIFLEEGFDIIDSSAAALARWQAEPQGRQEVE 1244 Query: 159 PRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDI---------- 208 L LK G + +G L + + S + P + + Sbjct: 1245 TLLRDLHTLKGGARMVEIAPIGDLAHELEFLFEGLSAGLLQPSPVLFTLLQKSHDRLAQM 1304 Query: 209 ---TAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIR 265 + A ++ ++S V AA + + ++ Sbjct: 1305 LDAARAGQPIEPAQKLIDAIHDLSHPRVATGVAAEAALPSTKPEPAAPAAEAAVAGDMVK 1364 Query: 266 VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIR 325 V+ E +D L+NL GE I + + Q+ D T++G+++ +++ + + Sbjct: 1365 VSAELLDDLVNLAGETSIFRGRIEQQV--------NDARTALGEMETTIERMRDQLRRLD 1416 Query: 326 MMPMEYVFSR 335 + SR Sbjct: 1417 TETQGRILSR 1426 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 96/271 (35%), Gaps = 4/271 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E +E+L + ++L + L+ + RA H++KG VL E Sbjct: 626 DDELREVFLEETEEVLEMLREYLPRWAADPHGTSALSELRRAFHTLKGSGRMVRALVLGE 685 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ ++ + L +T ++ E + + Q + D + Sbjct: 686 LAWAVENLLNRVLEHSVEPGVEARQLVADTLQLLPELIAEFAQQAQRQRDDVDRLAARAH 745 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA A+G P L + ++ +Q+ I L+ + + L Sbjct: 746 ALANGAQGSAPVPAEALDPQLL---EIFRTEAQTHLDSINRFLEQAAEHVPLQASDELQR 802 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 +KG+ S++ +LP + + + + + Q Sbjct: 803 ALHTLKGSASMAGVLPIAELAGPLDQLAREYRAHLIPLDLDEVELLLEAEGLLRRGLR-Q 861 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLI 275 + + RS ++ + E+++ L+ Sbjct: 862 LDSDPLAPIDGARSLVGRALALLGERLETLL 892 Score = 71.0 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 104/333 (31%), Gaps = 23/333 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F EA L + + L P + + + RA H++KG A G + E Sbjct: 763 DPQLLEIFRTEAQTHLDSINRFLEQAAEHVP-LQASDELQRALHTLKGSASMAGVLPIAE 821 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++ L E R + L+ D + L LE + +++ L + Sbjct: 822 LAGPLDQLAREYRAHLIPLDLDEVELLLEAEGLLRRGLRQLDSDPLAPIDGARSLVGRAL 881 Query: 125 QLALE-------AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 L E A P A ++ Q + + + GE L Sbjct: 882 ALLGERLETLLSAPDSAPRAKRDPQLINNFLAQGMDILLDAESLLRRWQQHPGERQELSA 941 Query: 178 ELGHLTTLTD--------VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 L LTTL + V L G + E + F EA+ + + Sbjct: 942 LLDELTTLGEGAHLADLHPVDELCEALLDLYGAVEESSLAVSERFFHEAESAHDALINML 1001 Query: 230 PKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 +++ + E+ R ++ + + I+ + + EL + L Sbjct: 1002 DELAAGQEVSPRPERVQALRELLDEGLDPSATGLIKSDGSR----ALSISELGAATARLE 1057 Query: 290 QR---SSELDPVNHGDLITSMGQLQRNARDLQE 319 Q D + L ++ L+ + LQ Sbjct: 1058 QAEAPLQADDEIVEIFLEEAVDILESADQALQR 1090 Score = 43.7 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 58/406 (14%), Positives = 119/406 (29%), Gaps = 67/406 (16%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTF---- 57 + D++ +Q EA L + + DAE L A+ ++G Sbjct: 429 TTDLTQIHQLVIQEARVCLHQAKDLIAECIEADWDAEHLQALPELLTQVRGALAMIPLPR 488 Query: 58 --------------------------GFSVLQETTHLMENLLDEARRGEMQLNTDIINLF 91 L + +E L+ I+++ Sbjct: 489 AAGLMQACQQFVVEHLLAARSRPDWQQLDHLADVLTSLEYYLERLSEDHEAPGEKILDVA 548 Query: 92 LETKDIMQEQ-LDAYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQ 150 + + ++ +P + S + Q L++L ++ + V + V A + P Sbjct: 549 QQGLLALGYVPVEQVPLLDQPLSPSEALVMQDLQELDDPRVAQSLADVLAVPVSALNPPA 608 Query: 151 DEQSRSQSPRRIILSRLKAGEVDLLEEE------------------------LGHLTTLT 186 S P + ++ EE L L Sbjct: 609 LITPGSLLPPPGDEEPVDDELREVFLEETEEVLEMLREYLPRWAADPHGTSALSELRRAF 668 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAP 246 +KG+ + L + +L V+E + + +L AE A Sbjct: 669 HTLKGSGRMVRALVLGELAWAVENLLNRVLEHSVEPGVEARQLVADTLQLLPELIAEFAQ 728 Query: 247 TGRVEREK---------TTRSNESTSIRVAVEKVD-QLINLVGELVITQSMLAQRSSELD 296 + +R+ + S V E +D QL+ + Q+ L + L+ Sbjct: 729 QAQRQRDDVDRLAARAHALANGAQGSAPVPAEALDPQLLEIFR--TEAQTHLDSINRFLE 786 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRD 342 + + +LQR L+ S ++P+ + +L R+ Sbjct: 787 QAAEHVPLQASDELQRALHTLKGSASMAGVLPIAELAGPLDQLARE 832 >UniRef50_C6NWJ7 Signal transduction histidine kinase CheA n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NWJ7_9GAMM Length = 641 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 184/651 (28%), Positives = 314/651 (48%), Gaps = 22/651 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + + EA ELL + L L+ + D L ++FRA H++KGGAG + L + Sbjct: 2 DREILEDYLPEARELLEQAQDMALRLEADPQDDNILASLFRAFHTLKGGAGFLEATALVD 61 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+LLD R + + +I+ L D++ + L+ +EP + + + +R Sbjct: 62 WAHHLEDLLDRLREHAVAVTPAVIDGILRGIDVIADMLNTLALGEEPSPGP-EELARTIR 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +L + T A + + + + + L + EE G T Sbjct: 121 ELTAARAQNA-AQQTPAVADAPAPGTTTTASDEISTADLAAALGRLQTAHASEEQGQTTD 179 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + L + + A P A+ Sbjct: 180 EISQEEFEAYLDKLYGDGAP---------GLGGASPSPSPAPSPEPAALVRDEQANASPP 230 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + V T +++RV +++D ++N VGELV+ ++ L ++++ D+ Sbjct: 231 SHAKAVHSPPTANEFGESTLRVDAQRLDAVMNQVGELVLLRNRLTAAAAKILD-GDEDMA 289 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 ++ DLQ +VM +RM P + +F + PR+VRD + +LGK+V L +VG E+DK Sbjct: 290 RIAREMDLTVNDLQNTVMRLRMQPCKRLFQQLPRVVRDASRQLGKEVRLEIVGEEVEIDK 349 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++ + PLTHL+RNSLDHGIE P +R A GK + ++A H G + IEV+DDG G Sbjct: 350 TVVDALSAPLTHLLRNSLDHGIEYPAEREALGKPREARIRVAAVHLGDKVRIEVSDDGHG 409 Query: 425 LNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 ++ +++ AKA +GL +E +S+ + LIF PGFST E+VTD+SGRGVGMDVV+ Sbjct: 410 IDAQKVAAKAVEKGLITAEQATRLSEQDAIELIFRPGFSTNERVTDISGRGVGMDVVRET 469 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 + + G +++ ++ G GTT+ + PLTLA+L + +R+ E++ LP++++ L Sbjct: 470 TRALRGRLDLTTQAGQGTTVALEFPLTLAVLPVLYLRLRREIYALPISSINGLLDIDPRR 529 Query: 542 LHPLAGGERVLEVR-GEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLI 600 H L GG+ V V +P+V+L ++ + + V+ G LLV +++ Sbjct: 530 QHHL-GGQSVYRVDSDNVVPLVDLGQILHQRPLRLGVEASEGVLTDRG----LLLVSEVL 584 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 G VVK L+ ATI G G V LI+D +++ E Sbjct: 585 GTEDSVVKALD-FLSDPNWYQGATISGQGQVVLILDPASIVQKALEAATVQ 634 >UniRef50_B1M893 CheA signal transduction histidine kinase n=11 Tax=Alphaproteobacteria RepID=B1M893_METRJ Length = 714 Score = 518 bits (1335), Expect = e-145, Method: Composition-based stats. Identities = 224/696 (32%), Positives = 337/696 (48%), Gaps = 74/696 (10%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 + F EA ELLA +E LL L D ++ FRA H+IKG FGF + TH Sbjct: 8 EIFRAEAAELLACLETTLLDLGDRPEDRTLIDTAFRALHTIKGSGAMFGFEQVAAFTHDF 67 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 E D RRGE+ + D++N+ L KD ++ ++ + S + I L QL Sbjct: 68 ETAFDRVRRGEVPVGRDLVNVSLSAKDFIRGLIEEPEASAPIIG---EAILAELEQLLGA 124 Query: 130 AKGETPSAVTRLSVVAKSEP-------------------QDEQSRSQSPRRIILSRLKAG 170 A + A + A ++ + R+ + +L L+ Sbjct: 125 AGADAAQAAADTAADAAADTAAASAAPPAEAGWRIGIAFAPDVLRNGTNPLALLDELRDL 184 Query: 171 EVDLLEEELGHLTTLTDVVKGADS--LSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 + L L L + + + L G ++ + V FV + +T E Sbjct: 185 GACTVVPRLEALPELPGLDPESLALGWDVTLRGPVSRAAVEDVFLFVRDEMVLTLEPAGP 244 Query: 229 SPKISTPPV------------------------------------------LKLAAEQAP 246 + + PP A AP Sbjct: 245 ALPDAAPPEPVPAQARAPAPPAPAPVAAEPAPPAAPAAAAAPAAAATPAVAAPPVAAAAP 304 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITS 306 + ++S+RV E++D+L++ VGELVI Q+ L Q + L T Sbjct: 305 ADARAPARRAEDRPASSVRVEAERLDELMDRVGELVIAQARLGQLAGLHADPG---LKTV 361 Query: 307 MGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSL 366 +++R + L+++ MSIRM+ + +F R+ RLV DLA LGK VE G TELDK++ Sbjct: 362 AEEIERLSARLRDTTMSIRMVAIGALFGRFRRLVHDLARDLGKPVEFVTGGEETELDKTV 421 Query: 367 IERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLN 426 IER+ DPL HL+RN++DHGIE P +R AA K + G + L+AEH G + + V DDGAGL+ Sbjct: 422 IERLADPLVHLIRNAIDHGIEAPARRAAAAKPATGRITLTAEHVGAQVLVSVRDDGAGLD 481 Query: 427 RERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKM 485 RI AKA +GL +SD ++ +FAPGFSTA ++ +SGRGVGMDVVK+ I+ + Sbjct: 482 AARIRAKAEERGLCAPGAVLSDQQIYQFLFAPGFSTAPTISALSGRGVGMDVVKKTIESL 541 Query: 486 GGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL 545 G ++I ++ G GT + + LPLTLAI++G+ +RV +++PL AV E + + Sbjct: 542 RGTIDITTEPGGGTCVALRLPLTLAIIEGLLIRVGAGRYVIPLAAVEECVALPAGE--RG 599 Query: 546 AGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQV 605 G L +RG +P + L +F G E + V+++ +G R L+ DQ+IG HQ Sbjct: 600 GRGRDFLNIRGALVPFLRLRDLFGAPGEPEEHQK--VIVVSAGEARVGLVADQIIGNHQT 657 Query: 606 VVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ 641 V+K+L + V S ATILGDG+ ALIVDV L Sbjct: 658 VIKSLSKLHADVATFSGATILGDGTAALIVDVGRLV 693 >UniRef50_B8GP53 Putative CheA signal transduction histidine kinase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GP53_THISH Length = 1974 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 182/696 (26%), Positives = 310/696 (44%), Gaps = 54/696 (7%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +E E+L + L + D + I R H++KGGA G + + Sbjct: 1146 DQELVDIFLEEGGEILDASDNLLESWRHNLNDQGIIAEIQRQLHTLKGGARMAGLRPIGD 1205 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL- 123 +H +E L+ + G Q ++++ ++ D + QL+ ++ + A + L Sbjct: 1206 LSHALETLVIDITEGRGQAQPAMLDVVAQSLDTLSRQLEQARRRESLITAP--DLIARLS 1263 Query: 124 -------RQLALEAKGETPSAVTRLSVVAKSEP-QDEQSRSQSPRRIILSRLKAGEVDLL 175 A A P V+ + P +DE + P RL E+ Sbjct: 1264 GFKAGEAEAPAERAAPSVPETVSITEEIPAQSPVEDEIVIEEIPVDEASPRLSVDELPDE 1323 Query: 176 EEELGHLTTLTDVVKGADSLSAI---------------LPGDIAEDDITAVLCFVIEADQ 220 EL + + D ++ V V++ Sbjct: 1324 TLELVEEPGYGGGEPTLTEIPEVSAAAPAEEPARAGARAAADSGPQELVRVRSEVLDNLV 1383 Query: 221 ITFETVEVSPKISTPPV-----------------------LKLAAEQAPTGRVEREKTTR 257 V + + L++ E R E+EK Sbjct: 1384 NYAGEVNIYHARLEQQITGFRFNLGELSQTVTRLREQLRKLEMETEAQILFRYEQEKQDH 1443 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDL 317 ++ + +++ + L L + + L ++ D T + Q R + DL Sbjct: 1444 EIDADFDPLEMDRYSNIQQLSRALAESINDLVSI-QDILSDQVRDSETLLLQQSRVSTDL 1502 Query: 318 QESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHL 377 QE +M RM+ + R R+VR A +LGK+VEL + G +ELD+S++ER++ PL H+ Sbjct: 1503 QEGLMRTRMVQFSNMVPRLRRVVRQTATELGKRVELDIQGEGSELDRSVLERMVSPLEHM 1562 Query: 378 VRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQ 437 +RN++ HGIE +KR A GK G++ + +G + I V+DDG G+N + + +KA Sbjct: 1563 LRNAVYHGIESADKRRATGKADAGHIDIQVTREGSEVVIRVSDDGGGINLDAVRSKAMRL 1622 Query: 438 GLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQG 496 GL E ++D+++ I GFSTA++V+ +SGRGVGMDVV I+++GG + I++ G Sbjct: 1623 GLIKGDEALTDEDIMQFILESGFSTAQEVSQISGRGVGMDVVNSEIKQLGGTLGIETVPG 1682 Query: 497 TGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL-HPLAGGERVLEVR 555 GT + LP TLAI + V+V ++++ +PL+++ ++ R DL + Sbjct: 1683 KGTRFTVRLPFTLAINQALLVQVGEDIYAVPLSSIEGIVRARAGDLARYYEEANPTYDYA 1742 Query: 556 GEYLPIVELWKVFNVAGAKTEATQG--IVVILQSGGRRYALLVDQLIGQHQVVVKNLESN 613 G + L + V+ A+ V++++SG R AL VD L+G +VV+K++ Sbjct: 1743 GNTYEVKHLGALLEVSQPNLHASDVMYPVLLVRSGDHRIALHVDGLLGSREVVIKSVGPQ 1802 Query: 614 YRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 KV GIS ATILGDG V LI+DV AL I ++ Sbjct: 1803 VAKVRGISGATILGDGRVVLILDVPALVRIGAGVQL 1838 Score = 73.4 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 79/270 (29%), Gaps = 1/270 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E E + + ++L + D E L + R+ H++KG G +L E Sbjct: 655 DEEIKEIFLEETTEEIERISEYLPRWRENPADQEALTTVRRSYHTLKGSGRLVGALLLGE 714 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 MENLL+ + + + E ++ + + + ++ + +A Sbjct: 715 FAWSMENLLNRIIDQSVSPGPAVYAVLGEALRMLPVLRGQIEGGEGDEPGTYALMARAHA 774 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 E + V ++ S I + +D + + Sbjct: 775 LARGETAPARAAPPALAPVEPPVSAALAEAPEASEPEISGEVVPTVILDREDLDFSSPDV 834 Query: 185 LTDV-VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 V + L G E L + D + +S + Sbjct: 835 QAPVTAETGPQADDTLTGLAVEGGFDLALEPGTDEDTLAQGETGLSLEDLDVGAAAEELN 894 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 E E +++ E ++ Sbjct: 895 ALEPLEGEFGSLETPPEESTLTFETEALEA 924 Score = 66.4 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 89/269 (33%), Gaps = 2/269 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +EA + L + L E +A+ RA H++ G A T + E Sbjct: 979 DPALFEIFRNEATQHLNTLRSQLEGASREDGGMPVTDALLRAVHTLNGAARTAEVPEIFE 1038 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 E + E + + F + + ++A + ++P + + + + ++ Sbjct: 1039 VCAPCERYVKARADTEAFVPGAALPGFWSLIEHVSGVIEALGRGEDPLPS-GERLAEDMQ 1097 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + E + + + + + + + E D ++ L Sbjct: 1098 AMLDEELARQERVRQEEARQSAAALAAAAAAAVPAQPAPTEAVTYDEQDQELVDI-FLEE 1156 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 +++ +D+L ++ + I A + + + + P L+ Sbjct: 1157 GGEILDASDNLLESWRHNLNDQGIIAEIQRQLHTLKGGARMAGLRPIGDLSHALETLVID 1216 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQ 273 GR + + + S+ +++Q Sbjct: 1217 ITEGRGQAQPAMLDVVAQSLDTLSRQLEQ 1245 >UniRef50_Q1IQS8 CheA signal transduction histidine kinases n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQS8_ACIBL Length = 727 Score = 517 bits (1333), Expect = e-145, Method: Composition-based stats. Identities = 197/707 (27%), Positives = 342/707 (48%), Gaps = 69/707 (9%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 ++ FF+ A ELL + L L+ DAE + I R H++KG + GF L E Sbjct: 10 AELRDLFFESAQELLQALNDEGLELERHPNDAEIVRDIRRTVHTLKGDSAACGFKELSEL 69 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPD------------- 112 H +EN L + +++ L L D L AY+++ Sbjct: 70 AHELENALTP--EITHAASGNLVELVLNAADTFDSLLTAYQRNSALPATDHVRNLIKRLT 127 Query: 113 ----------------AASFDYICQ--------ALRQLALEAKGETPSAVTRLSVV---- 144 + ++ + L +A+E + P + L +V Sbjct: 128 EKPQALDGGALKLEFMWSEYEQLLAEKGASSGARLFNIAIEVDPQCPMRMAALQLVKNVL 187 Query: 145 ----------AKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD------V 188 + + E + + E + + T L D Sbjct: 188 QGLGVTITIQPEGDMLPENISTIRAILATFQAPENIEKKIQIPAITRRTLLEDYLRPGQP 247 Query: 189 VKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTG 248 +G S + P + + + E + K + + Sbjct: 248 REGILSRATEAPKETPKAVAPPPKPAPPAPEPKKVEPPKPDLKTVPALLTVEEHDGDAHA 307 Query: 249 RVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD-----L 303 +RV +++D ++NLVGEL+I +SML Q S+ + D Sbjct: 308 DAPSPNPFAITPENLLRVDADRIDTVLNLVGELIINKSMLNQTLSDFGKQHAKDPLKARF 367 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELD 363 +M + +LQ +VM IRM+P+E +F R+PR+VRD+A GK+ +L + G +T+LD Sbjct: 368 ADAMAFQAQILNELQRAVMKIRMVPVEQLFRRFPRIVRDVARSSGKECDLIISGQNTDLD 427 Query: 364 KSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGA 423 KS+++ + +P+ HL+RN++DHGIELP R+AAGK+ G L L+A +QG + IE+TDDGA Sbjct: 428 KSILDALSEPMMHLIRNAVDHGIELPAARIAAGKSVKGTLKLNAFYQGNQVVIELTDDGA 487 Query: 424 GLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G++R+R++ KA + +E ++D + LIF PG STA QVT++SGRG+GMD+V+ Sbjct: 488 GIDRDRVVEKAIENNIVSEKEAEKLTDQDALNLIFRPGLSTATQVTEISGRGMGMDIVES 547 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 ++++ G + IQ+++G GTT ++ +PLTLAI+ + R A+ ++ +PL +V+E + Sbjct: 548 VLRRLKGSIGIQTEKGRGTTFQLRVPLTLAIMQALLFRAANRLYAVPLGSVVEIARATSQ 607 Query: 541 DLHPLAGGERVLEVRGEYLPIVELWKVFNV-AGAKTEATQGIVVILQSGGRRYALLVDQL 599 +H + VL++R + + +V L K+ ++E + VV++Q G RR+ ++VD+L Sbjct: 608 HIH-VVDHHEVLQLREQIVTLVRLDKLEGRKRQPQSEKHKVFVVVVQLGDRRFGMVVDKL 666 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINRE 646 +G+ ++V+K L+ N +S A+ILGDG V LI++V+++ Sbjct: 667 VGEEELVIKALDDNLVATDLVSGASILGDGKVVLILNVASVVERLGR 713 >UniRef50_D1TKM6 Putative CheA signal transduction histidine kinase n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TKM6_9BURK Length = 779 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 303/566 (53%), Positives = 360/566 (63%), Gaps = 10/566 (1%) Query: 89 NLFLETKDIMQEQLDAYKQSQEPD-AASFDYICQALRQLALEAKGETPSAVTRLSVVAKS 147 L E + + K + S D + + E+ + R + A Sbjct: 219 ELLAEELGNLGNIVGQVKSGGDLMLWLSSDVPSDDIIAVCCFVIDESQITIGRGTAPADD 278 Query: 148 EPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDD 207 Q E + ++ + + S +A + Sbjct: 279 AQQGEPGTPDAAAAPTPAQTAPVAPAAPAAQAQAQPVAHAEQAASSSPAAHTAAPASAAG 338 Query: 208 ITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVA 267 + + + S K A A E +SIRV Sbjct: 339 HADSIEPPPALPAAAPAAAKPAAAASADHDRKAARPAAAAASGEG---------SSIRVG 389 Query: 268 VEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMM 327 VEKVDQLINLVGELVITQ+MLA+ +S DP H L M QL+RNARDLQE+VMSIRMM Sbjct: 390 VEKVDQLINLVGELVITQAMLAETTSTFDPALHDRLFNGMAQLERNARDLQEAVMSIRMM 449 Query: 328 PMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIE 387 PM+YVFSR+PRLVRDLA KLGK+VEL G +TELDKSLIERIIDPLTHLVRNSLDHGIE Sbjct: 450 PMDYVFSRFPRLVRDLAAKLGKEVELVTFGQATELDKSLIERIIDPLTHLVRNSLDHGIE 509 Query: 388 LPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSD 447 E R AAGK+S G L+LSA H GGNI IEV+DDGAGL R++ILAKA QG+ VSE M+D Sbjct: 510 TVEARRAAGKDSTGQLVLSAAHHGGNIVIEVSDDGAGLRRDKILAKAVKQGMQVSETMTD 569 Query: 448 DEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPL 507 DEV LIF PGFSTAEQVTDVSGRGVGMDVVKRNIQ MGGHVEI S G G+T RI+LPL Sbjct: 570 DEVWNLIFLPGFSTAEQVTDVSGRGVGMDVVKRNIQSMGGHVEITSHAGKGSTTRIVLPL 629 Query: 508 TLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKV 567 TLAILDGMSV+V +E+FILPLN VMESLQP+ D++ +A GERV+ VRGEYLP+V L +V Sbjct: 630 TLAILDGMSVKVGNEIFILPLNFVMESLQPQAEDIYTVANGERVVRVRGEYLPLVALHEV 689 Query: 568 FNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILG 627 FNV+ AK E TQGIV I+Q+ GRR+A+L+D+L+GQ QVVVKNLE+NYRKV GISAATILG Sbjct: 690 FNVSEAKQEPTQGIVTIMQTEGRRFAMLIDELVGQQQVVVKNLETNYRKVHGISAATILG 749 Query: 628 DGSVALIVDVSALQAINREQRMANTA 653 DGSVALIVDV+AL R A Sbjct: 750 DGSVALIVDVAALNRETRHAHGHAQA 775 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 111/283 (39%), Positives = 136/283 (48%), Gaps = 46/283 (16%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L PD E L AIFRAAHSIKGGA TFGF+ Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVARPDPEDLAAIFRAAHSIKGGAATFGFT 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L ETTH++E+LLD AR E+ L D+I+ FLETKD++ QL Y+ S EPDA IC Sbjct: 61 ALTETTHILESLLDRARNNELVLRKDMIDTFLETKDVLSGQLADYRASAEPDAEVARAIC 120 Query: 121 QALRQLALEAK-----------------------------------GETPSAVTRLSVVA 145 L QL E++ G P V +V Sbjct: 121 AKLEQLHAESRMGGAPAAAAVETAPVAAQPTATQTTTPTTAVQQQGGTPPEHVVEQAVQM 180 Query: 146 KSEPQDEQSRSQSPRR-----------IILSRLKAGEVDLLEEELGHLTTLTDVVKGADS 194 E D + I L + + +LL EELG+L + VK Sbjct: 181 AGEWMDGEPAQTGQAAGMDDSAGPHLKITLRGVGEKDQELLAEELGNLGNIVGQVKSGGD 240 Query: 195 LSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 L L D+ DDI AV CFVI+ QIT + Sbjct: 241 LMLWLSSDVPSDDIIAVCCFVIDESQITIGRGTAPADDAQQGE 283 >UniRef50_Q4UXG6 PilL protein n=7 Tax=Xanthomonas RepID=Q4UXG6_XANC8 Length = 2345 Score = 517 bits (1332), Expect = e-145, Method: Composition-based stats. Identities = 170/645 (26%), Positives = 292/645 (45%), Gaps = 24/645 (3%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + F +E +LL + + ++ D + LN + R H++KGGA G + + + Sbjct: 1580 ELVDIFVEEGRDLLDHCDGLIARMREVPEDRDVLNGLQRDLHTLKGGARMAGINAIGDLG 1639 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDA--YKQSQEPDAASFDYICQALR 124 H +E+LL+ ++ D + LF D + + L ++ + R Sbjct: 1640 HAIESLLEAVAANRTDIDRDDVRLFERGFDRLHQLLTRTGMHRAVAMPTDLVEAFETRTR 1699 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + + + V + L R++ +V + + L L Sbjct: 1700 GRSTAPQTDADVRAIAKASVEPAPLSAPIPVDGQVEEDFLPRVQQEQVRVRADLLDRLVN 1759 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 V S G DQ+ +E +I + Sbjct: 1760 HAGEVAIYRSRLEQQLGAFRGAMGELDRTNARLRDQLRRLDLETEAQIVARYQREQDQGD 1819 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 +E +++ L L L + + L L+ + Sbjct: 1820 RTFDPLE----------------LDRFSTLQQLSRALNESAADLGGLQGVLEDL-SRQYD 1862 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + Q R + +LQ+ +M RM+P + + R R+VR A + GKQV L L G+ ELD+ Sbjct: 1863 GLLQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAATETGKQVHLVLEGTQGELDR 1922 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++R++ PL H++RNS+ HG+E PE+R AGK G++ + +G I +EV DDGAG Sbjct: 1923 NVLDRMVAPLEHMLRNSVAHGLETPEQRRDAGKPEEGSIAIRLRREGSEIVLEVADDGAG 1982 Query: 425 LNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 L+RE I + +GL + +S+ E+ LIFA GFST +QV+ ++GRGVGMDVV+ ++ Sbjct: 1983 LDREAIRRRGEQRGLIEPGQELSEAELDGLIFASGFSTFDQVSQLAGRGVGMDVVRNEVR 2042 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG V+I S +G G T + LP TLA+ + VR+ + F +P+ +V + Sbjct: 2043 QLGGSVDIHSVRGQGVTFTLRLPQTLAVTQAVFVRIGETTFAVPVGSVSGIGRISRTRYE 2102 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQLIGQ 602 GG GE + +L + A+ + Q ++++++G R A+ +DQ++G Sbjct: 2103 SGEGG---YHYAGEEYVLHDLGSLVGQPVARADGQAQVPLLLVRAGDLRAAVAIDQVLGN 2159 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 ++VVK + VPGI ATI GDG V +I+DVS L Q Sbjct: 2160 REIVVKPVGLQIASVPGIYGATITGDGRVVVILDVSPLVRRYLTQ 2204 Score = 83.8 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 88/293 (30%), Gaps = 12/293 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S D F +E DE L ++ Q L V + E L I R H++KG G S Sbjct: 742 SDIDDDIRVVFLEEFDEELVNLGQLLPVWRAAPHSQENLRPIRRVFHTLKGSGRLVGAST 801 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYI 119 L E + +E++L+ + ++ + ++ + A + D + Sbjct: 802 LGEFSWKIESMLNRVLDNSRPASPAVVAMVELAYAVLPQFNAALRDQGRISADLPDIQAV 861 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 + + AV V+ +P + + E ++ Sbjct: 862 AERVAAGEEAYYVPAVQAVAEAPVIPALPAGTAPITEGTPASVDSVLREILEAEVATHLE 921 Query: 180 GHLTTLTD-------VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKI 232 L V + + G A D+ + A+ + S Sbjct: 922 TVHGWLQAAQHGPQLVTEELLRAVHTMSGAFAMTDVPEITLVTTPAESYVKRLLGASATP 981 Query: 233 STPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQ 285 S V LAA A + S E++ L++ EL Q Sbjct: 982 SAEGVEALAATAAAIATTVTALRADAPLIPSFAPLTERLRGLVD---ELPEAQ 1031 Score = 54.9 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 31/289 (10%), Positives = 70/289 (24%), Gaps = 29/289 (10%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E L + L Q + RA H++ G + T Sbjct: 908 LREILEAEVATHLETVHGWLQAAQHGPQ--LVTEELLRAVHTMSGAFAMTDVPEITLVTT 965 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETK------------------------DIMQEQLD 103 E+ + + + + T + ++ +D Sbjct: 966 PAESYVKRLLGASATPSAEGVEALAATAAAIATTVTALRADAPLIPSFAPLTERLRGLVD 1025 Query: 104 AYKQSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII 163 ++Q P D + + T V A + +Q+ Sbjct: 1026 ELPEAQWPPQVFLDELEEVDTAQDTAGIELTGVEDLSRYVDADALATTGDISAQTTGDAA 1085 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVKGADSL---SAILPGDIAEDDITAVLCFVIEADQ 220 L + + +EL D AI E + + V + Sbjct: 1086 LDAQPQDDAPIAVDELATAEADDSSALSLDDAAPREAISDTAELEQQLREAIDAVPMSAD 1145 Query: 221 ITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 + E + + + + A + + ++ T+ V+ Sbjct: 1146 ASLENTQQADSDADAELTTAQDTVADEPVLAADAWDATDLQTTAPADVD 1194 >UniRef50_A3LGZ6 Two-component sensor (Fragment) n=8 Tax=Pseudomonas aeruginosa RepID=A3LGZ6_PSEAE Length = 539 Score = 517 bits (1331), Expect = e-145, Method: Composition-based stats. Identities = 243/514 (47%), Positives = 312/514 (60%), Gaps = 1/514 (0%) Query: 140 RLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAIL 199 R + + E+ +E G A Sbjct: 24 RGWLRVPEQEAAEEGFGLFDDAPARETADDDAFGFFDEGPGAPERAAAPEAFGLFDEAPG 83 Query: 200 PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN 259 +E + + S A A T R Sbjct: 84 APAASEAFGLFDEAPGSPPAEERAFGLFDGAPGSPAAPSAPAQAVAATARGAVAPVRGDG 143 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 ES SIRV+VEK+D LINLVGELVITQ+ML Q +LDP H L ++ QL+ N RDLQE Sbjct: 144 ESGSIRVSVEKIDSLINLVGELVITQAMLGQLGEQLDPSRHERLQHALAQLEHNTRDLQE 203 Query: 320 SVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVR 379 SVMSIRM+P+ ++FSR+PRLVRD A +LGKQVEL L G TELDKS+IE++ DPLTH+VR Sbjct: 204 SVMSIRMLPINFIFSRFPRLVRDTATRLGKQVELHLHGEHTELDKSVIEKLSDPLTHIVR 263 Query: 380 NSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGL 439 NS+DHGIE P +RLAAGK + G + L+A HQGG++ +EV+DDG GL+R RILAKA + L Sbjct: 264 NSIDHGIETPAERLAAGKPASGTVKLAASHQGGSVVVEVSDDGRGLSRPRILAKARERNL 323 Query: 440 TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGT 499 V + MSD EV L+F PGFSTAE VT++SGRGVGMDVVKRNI MGG ++I S G GT Sbjct: 324 PVHDGMSDAEVWQLVFMPGFSTAETVTELSGRGVGMDVVKRNIGAMGGRIDIDSAPGMGT 383 Query: 500 TIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE-RVLEVRGEY 558 I I LPLTLAILDG+ V V +++PL ++ESLQ R D+ L G + ++ VRGEY Sbjct: 384 RIGIRLPLTLAILDGLIVAVEAVNYVIPLTYIVESLQARSDDVRGLGGEDNAMIRVRGEY 443 Query: 559 LPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVP 618 LP+ L ++ + G QGIVVIL+S GR +AL VD+L+GQ QVV+K+LE N+R+V Sbjct: 444 LPLFSLHELLRIGGEAPAPEQGIVVILESEGRSFALQVDELVGQQQVVIKSLEQNFRRVE 503 Query: 619 GISAATILGDGSVALIVDVSALQAINREQRMANT 652 GI+ ATI+GDGSVALI+DV AL + + A+ Sbjct: 504 GIAGATIMGDGSVALILDVDALPRLAAREDTADE 537 >UniRef50_B8FJE6 CheA signal transduction histidine kinase n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJE6_DESAA Length = 778 Score = 516 bits (1330), Expect = e-145, Method: Composition-based stats. Identities = 204/648 (31%), Positives = 316/648 (48%), Gaps = 61/648 (9%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F EADELL E LL ++ + E ++ FRA HS KG G G S + Sbjct: 189 QEMLDRFVTEADELLEQCEAMLLTMEDDTT-GEPVHEAFRAMHSFKGNCGFMGLSDPERM 247 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +H MEN+L + G + +D + L+ DI+++ + + + + Q L + Sbjct: 248 SHRMENVLSGVKEGIIAPTSDNTGILLKLVDILRDAVADVSSGGKGAIDNLELYVQLLDE 307 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL-TT 184 + EA ++ +K G+ E Sbjct: 308 ILPEASESEAEPEPAAEPQPEAAEPASVPAPAEESPQPSLEIKLGDEKAPEAPQDAASPK 367 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + P I DI L + + E V ++ P Sbjct: 368 AVPAKPKEMPATKAAPRTIVRQDIRVDLAKLDHLINLVGELVIAETMVTRNP-------- 419 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 +LVG + + Sbjct: 420 -------------------------------DLVG------------------HDFENFE 430 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 S L + RDLQ+ +S+RM+P+ VF + RLV DL+ K GK++ LTLVG TE+DK Sbjct: 431 KSAMHLSKIVRDLQDISLSVRMIPIAGVFRKMIRLVHDLSAKAGKKINLTLVGEDTEIDK 490 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++ E I DPL HLVRNS+DHG+E P++R AAGK+ G ++L A H+GG + + + DDG G Sbjct: 491 TVGEIIADPLVHLVRNSIDHGLEPPDERKAAGKDETGEILLQAGHEGGEVWVLIRDDGRG 550 Query: 425 LNRERILAKAASQGLTVSE--NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 L+RE IL+KA +GL + ++SD +V +IF PGFSTA+QVTD+SGRGVGMDVVK+NI Sbjct: 551 LSRENILSKAIERGLVNGDGSDLSDSDVYNMIFHPGFSTAKQVTDISGRGVGMDVVKKNI 610 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 +++ GH+++++ G G TI + LPLT+AI++G+ VRV + +PL AV E++Q + + Sbjct: 611 ERIKGHIDVRNNPGHGCTIVLRLPLTMAIIEGLLVRVGKAKYTVPLLAVRENIQVTKEMI 670 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQ 602 G+ ++ VRG+ LPI + ++ N + G++VI+++ G L VD+++G Sbjct: 671 TKTMDGQELVMVRGQLLPIYRVHELHNTRPDNYKLEDGLLVIVENRGEMACLFVDEILGD 730 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 Q V+K L + V G+S TILGDG V+LI+DV+ L + A Sbjct: 731 QQAVIKGLSNYIGSVRGVSGCTILGDGEVSLILDVAGLIRKAQGLEAA 778 Score = 96.1 bits (238), Expect = 4e-18, Method: Composition-based stats. Identities = 44/235 (18%), Positives = 82/235 (34%), Gaps = 13/235 (5%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAP-----DAEQLNAIFRAAHSIKGGAGTF 57 M + F ++ ELL D E L+ LQ + + E +N+IFR HS+KG AG Sbjct: 1 MADATLLGEFVLDSLELLDDAEPKLIELQASSQVPDQVNTESINSIFRLFHSMKGSAGML 60 Query: 58 GFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ--SQEPDAAS 115 + TH E LLD R G+ Q+ ++ + D+++E L + + + S Sbjct: 61 ELHNITSLTHEAETLLDMFRSGKTQMTRAHMDTLFKAMDLIREILASVDANLTDKGFEDS 120 Query: 116 FDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 + + L +A+ G S + +P + P + + D Sbjct: 121 VSGLVEEL-GIAISQSGGDASPAPKAKKPEPVKPLEPPPPPPPPEPVAEPAPEPAAADFS 179 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 +E + + ++ E +L + + Sbjct: 180 FDEFE-----IPITQEMLDRFVTEADELLEQCEAMLLTMEDDTTGEPVHEAFRAM 229 >UniRef50_C7P7C7 CheA signal transduction histidine kinase n=4 Tax=Euryarchaeota RepID=C7P7C7_METFA Length = 969 Score = 515 bits (1328), Expect = e-144, Method: Composition-based stats. Identities = 162/466 (34%), Positives = 278/466 (59%), Gaps = 8/466 (1%) Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPP 236 + G T+ +K ++ I + +I V + + E E + Sbjct: 506 DFNGTKFTVYMKLKEGYNVDDIKEHIMNVPEIKDVQIITSKGEVSEHEEKEEAKAQEQQQ 565 Query: 237 VLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELD 296 + + E+ P + + +K + + +IR+ +EK+D+L+NLVGELVIT++ +Q +++ Sbjct: 566 PQQKSEEKKPEAKPKTDKKEKKKSTQTIRINIEKLDKLMNLVGELVITRANFSQIANKYQ 625 Query: 297 PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLV 356 +L ++ +L +LQE VM++RM+P+ YVF+R+PR+VRD A LGK+VE + Sbjct: 626 ---LKELNNAINRLSMLINELQEEVMAMRMVPVAYVFNRFPRMVRDTAKALGKEVEFIME 682 Query: 357 GSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICI 416 G+ ELD+++++ + +PL HL+RN+LDHGIE PE+R GK G L L A+ + ++ I Sbjct: 683 GTDIELDRTVLDELAEPLVHLIRNALDHGIEPPEEREKMGKPRKGTLKLIAQRERDHVNI 742 Query: 417 EVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGV 473 V DDG G++ ++I KA +GL E +SD E LIF PGFSTAE+V++VSGRGV Sbjct: 743 IVEDDGRGIDPDKIRKKAVEKGLISEEEAKKLSDHEAINLIFLPGFSTAEKVSEVSGRGV 802 Query: 474 GMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVME 533 GMDVVK I+ +GG V + S++G GT + + LPLT++I+ + +++AD+V+ +P+ +V++ Sbjct: 803 GMDVVKTKIESLGGSVVVYSEKGKGTRVVLKLPLTMSIITALLLKLADQVYAIPITSVLD 862 Query: 534 SLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAG-AKTEATQGIVVILQSGGRRY 592 D+ + G + R E +P++ L ++ + +V+++ + Sbjct: 863 VTVVNRKDVKNIE-GTYSIIYRDEIIPVIWLKDFLGMSHLQDKNKEELTIVVIERSEGKI 921 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 ++VD+++G+ +VVK L + +PG++ ATILGDG VALI+D+S Sbjct: 922 GVVVDEVVGREDIVVKTLTGILKNIPGLAGATILGDGRVALILDLS 967 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 1/167 (0%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M ++++ F +EA+E + ++ + LL L+ + + + +N IFR+AH+IKGGA T G S Sbjct: 1 MGDVMNEYLDVFVEEAEEHIQNINECLLELEKDPSNLDLINQIFRSAHTIKGGARTVGLS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + + TH ME++LD R G++ + ++I+++ E D ++ LD K + + + Sbjct: 61 HISDLTHHMEDILDYIRNGQIPVTSEIVDMLFECLDALEVMLDEVKSGNTETSVDVNSLI 120 Query: 121 QALRQL-ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR 166 + ++QL G + A ++ EP E+ S Sbjct: 121 EKIKQLKDKYLSGGSKPAEAPTPKPSEQEPTSEKKEESKGEVSEESE 167 >UniRef50_B4SSF2 CheA signal transduction histidine kinase n=3 Tax=Stenotrophomonas RepID=B4SSF2_STRM5 Length = 2212 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 171/642 (26%), Positives = 303/642 (47%), Gaps = 10/642 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +E +LL + + L+ D E L+ + R H++KGGA G + + + Sbjct: 1435 DRELVDIFVEEGKDLLDHCDGLISELRDAPQDREALSGLQRDLHTLKGGARMAGINAIGD 1494 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+LL+ G ++ + L D + + L + + +A Sbjct: 1495 LGHSIESLLEAVAAGRTEIERRDVQLLERGFDRLHQLLT--RTGAHRVVEPAQDLVEAFE 1552 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +A S+V + + + + L A V ++E+ Sbjct: 1553 VRTTTDIAAAAAAANAASMVEAASATIAAPVTALADAPLSAPLPAEGV--VDEDALARPQ 1610 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 V AD L ++ + L + A + +E + + +L E Sbjct: 1611 QEQVRVRADLLDRLVNHAGEVAIYRSRLEQQLGAFRGAMGELERTNARLRDQLRRLDLET 1670 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 ++ + + +++ L L L + + L LD ++ Sbjct: 1671 EAQIVARYQREQDQADQKFDPLELDRFSTLQQLSRALNESAADLGGLQGVLDDLS-RQYD 1729 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 + + Q R + +LQ+ +M RM+P + + R R+VR GKQV LTL G+ ELD+ Sbjct: 1730 SLLQQQSRVSSELQDGLMRARMVPFDGLVPRLRRVVRQAGMDTGKQVHLTLEGTHGELDR 1789 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 ++++R++ PL H++RNS+ HG+E PE+R AAGK G + + +G I ++V DDGAG Sbjct: 1790 NVLDRMVAPLEHMLRNSVAHGLEAPEQRRAAGKPEEGEIAIRLHREGSEIVLDVADDGAG 1849 Query: 425 LNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 L+RE I +A +GL V++ S+ E+ LIFA GF+TA+QV+ ++GRGVGMDVV+ ++ Sbjct: 1850 LDREAIRRRALDRGLLVADAQPSEQELDNLIFASGFTTADQVSQLAGRGVGMDVVRNEVR 1909 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 ++GG V+IQS +G G + LP TLA+ + V++ + F +P+ +V + Sbjct: 1910 QLGGSVDIQSVRGQGVRFTLRLPQTLAVTQAVFVQIGETTFAVPVASVSGIGRLSRE--- 1966 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQ 602 + GE P+ +L + A A+ + ++++++G R A+ +DQ++G Sbjct: 1967 RFEAADSSYRYSGEDYPLYDLGSLVGQAPARADGQDQVPLLLVRAGDLRAAVAIDQVLGN 2026 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAIN 644 ++VVK + VPGI ATI GDG V +I+DV+ L Sbjct: 2027 REIVVKPVGLQIASVPGIYGATITGDGRVVVILDVAPLVRRF 2068 Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 38/247 (15%), Positives = 75/247 (30%), Gaps = 5/247 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + F +E D+ LA++ L + + + ++L I R H++KG G L E Sbjct: 789 DEDIREVFLEEFDDELANLGTLLPAWRMQLDNMDRLRPIRRIFHTLKGSGRLVGARTLGE 848 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQ--EPDAASFDYICQA 122 +E +L+ G + ++ + + + A + Q D + I Sbjct: 849 FAWKIEGMLNRVLDGSRAASPAVLAMVDNAHAALPQLNAALRDGQRISVDLQAMQAIADR 908 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 + P A + +E +DE SR + + AG V E G Sbjct: 909 VGAGEETFYVPLPVAAAPAVPPSAAEGEDEISRILEAEAVASVQGNAGTV---VEATGTP 965 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + V++ + +D + + V + Sbjct: 966 ANIDSVLREILEAEVEVHQATLQDWLRSAQQAPQPVSDALLRAVHTMNGAFAMTEVPEIT 1025 Query: 243 EQAPTGR 249 Sbjct: 1026 AVTGGAE 1032 Score = 61.8 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 91/321 (28%), Gaps = 11/321 (3%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E + A ++ L Q +A+ RA H++ G + T Sbjct: 972 LREILEAEVEVHQATLQDWLRSAQQAPQ--PVSDALLRAVHTMNGAFAMTEVPEITAVTG 1029 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E+ + A ++ + + T + +DA + Q P A D + Q L+ LA Sbjct: 1030 GAESYIKRALAADVVPGEEGLAALDATAQAITATMDALQAEQ-PRIAPQDALVQRLQALA 1088 Query: 128 LEAKGE----TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE-ELGHL 182 E + +E E + + EVD+ Sbjct: 1089 GELPEARWPMVGLEDEDEDLALDAEDDAEVPAALEAPSEQVLEPIPAEVDVAAALATADS 1148 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + +D LS + + + ++ +T A Sbjct: 1149 GLDVAELTASDDLSRYFDAGWPSVPGEGEPAVIAPDALESVQVDAIAAIPATEDADAEPA 1208 Query: 243 EQAPTGR--VEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + +++++ V D+ I + +++ + Sbjct: 1209 SSLADAADLTVADDLSPYLDASALPVDDRDADEAATFGEADAINLNATLSDDADVVEDSF 1268 Query: 301 GDLITSMGQLQRNARDLQESV 321 D ++ L LQ+ + Sbjct: 1269 LDTPAALP-LDSELSSLQDEM 1288 Score = 43.3 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 14/137 (10%), Positives = 36/137 (26%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E DE L + + + DA ++ H ++G +E L + Sbjct: 19 ELDETLRQVRNEVEYYAEDPSDASRMRICAGYLHQVQGTLRMVELYAPAMVAEELEQLSN 78 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGET 134 G + + + ++ + L+ + + +R E Sbjct: 79 AIGAGRVADRDEACATLMRGSVLLPDYLERLQNGHRDIPIVLMPLLNEIRAARGEEGVHD 138 Query: 135 PSAVTRLSVVAKSEPQD 151 + + + Sbjct: 139 SVLLAFAPDSVSATEAE 155 >UniRef50_A9AD35 Two-component system sensor kinase n=42 Tax=Proteobacteria RepID=A9AD35_BURM1 Length = 761 Score = 515 bits (1327), Expect = e-144, Method: Composition-based stats. Identities = 303/547 (55%), Positives = 358/547 (65%), Gaps = 3/547 (0%) Query: 111 PDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR---SQSPRRIILSRL 167 DA + + L L L + + D + +I ++R Sbjct: 210 VDAKDQALLVEELGNLGRIVGRTEVGDALTLWLESDVPSDDIVAVCCFVIDESQIRIARG 269 Query: 168 KAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVE 227 A + + A + Sbjct: 270 AAPAATQPAAAAQVVAEPPHGEAAPQPAAPAAAPAATAAAPAATPAASTASAAPAAAPAA 329 Query: 228 VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 + + + AA E +SIRV VEKVDQLINLVGELVITQ+M Sbjct: 330 HAESPAPSAAAQPAAHHDDKRARPAAAAAAGAEGSSIRVGVEKVDQLINLVGELVITQAM 389 Query: 288 LAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKL 347 LA+ +S DP H L M QL+RNARDLQE+VMSIRMMPM+YVFSR+PRLVRDLAGKL Sbjct: 390 LAETASAFDPALHDRLFNGMAQLERNARDLQEAVMSIRMMPMDYVFSRFPRLVRDLAGKL 449 Query: 348 GKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSA 407 GKQVEL G +TELDKSLIERIIDPLTHLVRNSLDHGIE +KR+AAGK++VG L+LSA Sbjct: 450 GKQVELVTFGQATELDKSLIERIIDPLTHLVRNSLDHGIETVDKRIAAGKDAVGQLVLSA 509 Query: 408 EHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSENMSDDEVAMLIFAPGFSTAEQVTD 467 H GGNI IEV+DDGAGLNRERILAKAA QG+ + EN+SDDEV LIFAPGFSTAE VTD Sbjct: 510 AHHGGNIVIEVSDDGAGLNRERILAKAAKQGMQIPENISDDEVWQLIFAPGFSTAETVTD 569 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 VSGRGVGMDVVKRNIQ MGGHVEI S+ G GTT RI+LPLTLAILDGMSV+V E+FILP Sbjct: 570 VSGRGVGMDVVKRNIQSMGGHVEISSQAGRGTTTRIVLPLTLAILDGMSVKVGSEIFILP 629 Query: 528 LNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQS 587 LN VMESLQP D++ + GERV+ VRGEYLP+V L +VF+V GA+T+ TQGIV I+++ Sbjct: 630 LNFVMESLQPSNDDIYTVGNGERVVRVRGEYLPLVALHEVFSVEGARTDPTQGIVTIMET 689 Query: 588 GGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 GRR+A+L+D+L+GQ QVVVKNLE+NYRKV GISAATILGDGSVALIVDV+AL R Sbjct: 690 EGRRFAMLIDELVGQQQVVVKNLETNYRKVHGISAATILGDGSVALIVDVAALNRETRAT 749 Query: 648 RMANTAA 654 A A Sbjct: 750 HGARAGA 756 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 109/267 (40%), Positives = 143/267 (53%), Gaps = 43/267 (16%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M++DI+ FYQTFFDEADELLA MEQ LL L APDAE L AIFRAAHSIKGGA TFGFS Sbjct: 1 MTLDITQFYQTFFDEADELLAQMEQLLLNLDVGAPDAEDLAAIFRAAHSIKGGAATFGFS 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L +TTH++E+LLD AR E+ L ++++ FLETKD++ +QL Y+ S EPDAA+ IC Sbjct: 61 ALTDTTHILESLLDRARNHELTLTKEMVDAFLETKDVLSDQLADYRASAEPDAAAAAAIC 120 Query: 121 QALRQLALEAKG-------------------------------------ETPSAVTRLSV 143 L +L ++ G E A S Sbjct: 121 AKLERLQADSGGAAASVAAPAAVAVAAPASAAPAVAPAADGQRAPDHVVEQAVAAAHPSA 180 Query: 144 VAKSEPQDEQSRSQSP------RRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA 197 + PQ + + +I L+ + A + LL EELG+L + + D+L+ Sbjct: 181 AGAAAPQTDAADEGDSNGDGPHLKITLTGVDAKDQALLVEELGNLGRIVGRTEVGDALTL 240 Query: 198 ILPGDIAEDDITAVLCFVIEADQITFE 224 L D+ DDI AV CFVI+ QI Sbjct: 241 WLESDVPSDDIVAVCCFVIDESQIRIA 267 >UniRef50_A4FXW0 CheA signal transduction histidine kinase n=4 Tax=Methanococcus maripaludis RepID=A4FXW0_METM5 Length = 920 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 179/568 (31%), Positives = 305/568 (53%), Gaps = 24/568 (4%) Query: 89 NLFLETKDIMQEQLDAYKQSQEPDAASFDY---ICQALRQLALEAKGETPSAVTRLSVVA 145 +L D + + A + + + + + LE V + Sbjct: 361 DLLSSGSDEIDILISADSDGMDISDSVCEMEYVVSAQVNFEVLENNSPIQEHVIKKPTAP 420 Query: 146 KSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSA-------- 197 K+E EQ + + LKA L+ ++L + + + + Sbjct: 421 KTEDTCEQYK-IDIKIDPECLLKAVRAYLVIKDLKEKGIILETEPSEEKIQEGNLDGNGV 479 Query: 198 --ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 D +E+DI ++ E I+ E V S +I + A + + + Sbjct: 480 TIYYDTDESEEDIKEIISKTPEITSISIEMVHKSIEIPEFDLKNKNTTDATSKK--QSDN 537 Query: 256 TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNAR 315 + S +S ++RV +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L A Sbjct: 538 STSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNAVGRLNMLAT 594 Query: 316 DLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLT 375 +LQE VM +RM+P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + +PLT Sbjct: 595 ELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDELAEPLT 654 Query: 376 HLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAA 435 HL+RNSLDHGIE ++R+ GK G L L A + + I + DDG G+N + + K Sbjct: 655 HLIRNSLDHGIEHADERIKLGKPEKGVLKLIATRKRDRVNIIIKDDGKGINPDAMREKVI 714 Query: 436 SQGLTV---SENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 +G+ +E ++D+E LIF PGFSTAE V+DVSGRGVGMDVV+ I+ +GG V + Sbjct: 715 KKGMYTKEEAEKLTDNEAVNLIFLPGFSTAEVVSDVSGRGVGMDVVRSKIESLGGSVSVH 774 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVL 552 S+ G GT I + LPLT+AI+ + VR+ ++++ LPL +V++ + + + L G E ++ Sbjct: 775 SEVGKGTEITLHLPLTMAIIQTLLVRLKEQIYALPLTSVLDVISVEKDQIKNLEGQEAII 834 Query: 553 EVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLES 612 R LP++ L N E VV+++ + +++D++IG+ ++VVK L Sbjct: 835 -YREHILPVIWLKDALNTYEVS-ETENLYVVVVEKNKGKVGVILDEVIGRDEIVVKPLTG 892 Query: 613 NYRKVPGISAATILGDGSVALIVDVSAL 640 + + G++ ATILGDG VALI+D++ + Sbjct: 893 ILKNINGLAGATILGDGRVALILDLNNI 920 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 56/321 (17%), Positives = 121/321 (37%), Gaps = 7/321 (2%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFS 60 D+ + + F EA+E L + Q+++ L+ D+E +N IFR+AH++KG A T GF Sbjct: 1 MDDMEQYKELFMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFE 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH ME++LD R G +++N +I++L + D ++ + + + + Sbjct: 61 HISSLTHHMEDILDYIRDGRIKINPEIVDLLFKCLDALETMVSEVSDGENTTNVDVNTLV 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + ++ + + S + + ++ E + + S +K E G Sbjct: 121 ETIKSVKTKYLSGDYSPGSSVDEISADEKNELEQEPAQNSDFNESLIKLTEESTNIVIKG 180 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 ++ + + D + + + +E E+S I V Sbjct: 181 NVNDTVERPENLDDILNQMQESASALQTILEALDYLELKNTVNNIAELSSAILNEKVKIT 240 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 + + S ++ +L + S+LA + E+ Sbjct: 241 DNSLSVLKSSLLTMEKIAKVVESGSNPGDEYSELNEKI------LSVLADNTEEITADKE 294 Query: 301 GDLITSMGQLQRNARDLQESV 321 L ++ L+ + DL + Sbjct: 295 IILDHTIFNLEEVSDDLISEI 315 >UniRef50_C7RK06 CheA signal transduction histidine kinase n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RK06_9PROT Length = 1797 Score = 513 bits (1322), Expect = e-144, Method: Composition-based stats. Identities = 180/649 (27%), Positives = 308/649 (47%), Gaps = 33/649 (5%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F +EA EL + L + D+E + + R H++KG A G L E Sbjct: 1034 DEQLLPLFLEEALELNQGIATQLRAWRSNPADSEVVRRLARLFHTLKGSARMAGAMNLGE 1093 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA--ASFDYICQA 122 TH +E ++EA+R ++I+ D++ + +++ ++ + DA D + Sbjct: 1094 LTHAIETRMEEAQRAG-PAAPELIDDVDNVFDVIVQAVESLQRGESSDALVEVPDDVVAE 1152 Query: 123 LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 ++ + G AV + + ++ E Q+ ++ + + R I+ R++A +D L E G L Sbjct: 1153 ADVESVASAGGLAGAVEQAAPASQREAQEGETDAATQRAIL--RVRADLIDRLVNEAGEL 1210 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + ++G D+ E+ I + Sbjct: 1211 SIARSRIEGEMRSIKGSLLDLTENVIRLRRQLRDIELHAELQM--------QSRTALTDE 1262 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 +E ++ TR E T R+ E V+ + L+ N D Sbjct: 1263 SHTDFDPLEFDRFTRFQELT--RMMAESVNDVATAQQSLL---------------KNLDD 1305 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 ++ R R+LQ+ +MS+RM+P + R R+VR ++GK+ L + G+ EL Sbjct: 1306 ANAAILAQSRLNRELQQELMSVRMVPFASIADRLYRIVRQATKEIGKRANLEISGAELEL 1365 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++++++ PL H++RN++ HG+E + RLA GK +G L L+ +G + + +DDG Sbjct: 1366 DRTVLDKMLAPLEHILRNAVAHGLERADVRLAKGKPEIGELSLTLAQEGNEVILCFSDDG 1425 Query: 423 AGLNRERILAKAASQGLTVSENMSDD-EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AGL+ ER+ + + GL E +D V LIFAPG STA +V+ +SGRG+GMDV+K Sbjct: 1426 AGLDLERLRERGLAAGLLTREEAADPTRVVDLIFAPGISTASEVSRLSGRGIGMDVLKSE 1485 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 + +GG +E+ S G GTT R+ LPLTLA+ + VR + +P + + L +E Sbjct: 1486 VASLGGRIEVVSNIGQGTTFRLYLPLTLAVTKALLVRSGKREYAIPSAMIEQVLDLKEKG 1545 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGI-VVILQSGGRRYALLVDQLI 600 L + + V G P L + + A E Q V++L+SG R L VD L+ Sbjct: 1546 LARIRDAK-VASWSGNPYPFHYLPHLLGDSQALPEKHQQYWVLLLRSGTGRIGLQVDGLL 1604 Query: 601 GQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRM 649 G ++VVKN+ +V G+ AT+LG+G V LI++ AL + R Sbjct: 1605 GNQEIVVKNVGQQLARVIGVDGATVLGNGQVVLILNPVALASRTRGGAP 1653 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 57/315 (18%), Positives = 113/315 (35%), Gaps = 9/315 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F DEADE+LA ++Q+ +L+ DA+ L A+ R+ H++KG G L E Sbjct: 681 DAELLGIFLDEADEVLASIDQNFQLLKTRPHDADLLAALRRSVHTLKGSGRMVGLKDLGE 740 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E +L+ R E ++ I++L +T + +D K Q + I A Sbjct: 741 AAWSIEQVLNLWLRQEQEVTPAILDLLAQTYRVFLAWVDHLKTGQGRAPDASSMIAHADS 800 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 V +E S + +A + L Sbjct: 801 LRQGSEAATELPRTGDAVVAPMGAAGEEAGELPSDSEPESTSEQAPVAYQEAKTRRRLAL 860 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 D+V+ ++ + + + + I+ + Sbjct: 861 APDLVEIFNAEAGAHLATLQRELEPLQADPNAPTKHEMYRAAHTLAGIAATLGIAAVNRL 920 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 A + ++ S+ E ++ + + EL + MLA +SE +P +L+ Sbjct: 921 AHALEHSLVRRNQAAHPDSL----EALETIRQTIAELAL---MLADVASEHEPEATPELV 973 Query: 305 TSMGQL--QRNARDL 317 ++G L ++ A +L Sbjct: 974 DALGTLYPEQVAEEL 988 >UniRef50_A4XPB5 CheA signal transduction histidine kinase n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPB5_PSEMY Length = 2423 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 180/646 (27%), Positives = 295/646 (45%), Gaps = 19/646 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 SD F +E D+LL ME + + + D + + R H++KGGA G L + Sbjct: 1636 DSDILDIFLEEGDDLLEAMEAVIGRFETQRDDVSAIEEMQRILHTLKGGARLAGQKRLGD 1695 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H +E L EA + + + +Q++LD +Q + +L Sbjct: 1696 LSHDLEQHLTEALQQGAPWPESLFLDVQSGFEGLQQELDLLRQ----------RLSASL- 1744 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 EA + + ++ P S S + +E Sbjct: 1745 AGQEEAAPVSEADPGANTLTPLLNPIVAASDVPSQVQARKVLPFVQRAQEAAQEAAARRA 1804 Query: 185 LTDVVKGADSLSAILPGDIAEDDI--TAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 ++VK L L E I V V + E ++ Sbjct: 1805 PQELVKVPAELLEGLVNLAGETSIFRGRVEQQVSDVGFTLSEMEATIDRVRDQLRRLDTE 1864 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 QA + + R+ + +++ QL L L + S L L + D Sbjct: 1865 TQAQILSRYQAEAERAGYEDFDPLEMDRHSQLQQLSRALFESASDLLDLKETL-AAKNRD 1923 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 T + Q R +LQE +M RM+P + + R R+VR +AG+LGKQVE + + E+ Sbjct: 1924 AETLLLQQARVNTELQEGLMRTRMVPFDRLVPRLRRIVRQVAGELGKQVEFVVGNAEGEM 1983 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++ERI+ PL H++RN++DHGIE E R AAGK G + L+ +G +I + + DDG Sbjct: 1984 DRTVLERIVAPLEHMLRNAVDHGIEQAEVRRAAGKPDTGTIRLNLGREGADIVLTLDDDG 2043 Query: 423 AGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 AG+ + + KA +GL ++ ++SD EV I GFSTAE+VT +SGRGVGMDVV Sbjct: 2044 AGIRLDAVRRKAIERGLMDADSDLSDHEVLQFILEAGFSTAEKVTQISGRGVGMDVVHSE 2103 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 ++++GG + I+S G GT I LP T+++ + V ++++ +PLN + ++ + Sbjct: 2104 VKQLGGSMSIESSLGQGTRFTIRLPFTVSVNRALMVYSGEDLYAIPLNTIEGIVRVSPFE 2163 Query: 542 LHP-LAGGERVLEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVD 597 L A E G+ + L + N ++ V++++S A+ VD Sbjct: 2164 LEAYYAPDAPRFEYAGQTYELKYLGDLLNNGQQPKLVGQSLPLPVILVRSSEHAVAVQVD 2223 Query: 598 QLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 L G ++VVK+L + V GIS ATILGDG V +I+D+ A + Sbjct: 2224 SLAGSREIVVKSLGPQFAGVHGISGATILGDGRVVVILDLLATIRV 2269 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 44/327 (13%), Positives = 98/327 (29%), Gaps = 7/327 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA ++L Q L E + L+A+ R H++KGGA + + Sbjct: 1273 DEEMVEIFLEEAVDILESAAQALERWLGEPDNTLPLSALQRDLHTLKGGARMAAIRPIGD 1332 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI-CQAL 123 H +E+L + + + L ++ D + + LD + Q +A + + Sbjct: 1333 LGHELESLYEGLVDRRYSHSPALGTLLQQSHDRLAQMLDQLQARQTLASADELILAIRQF 1392 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLT 183 R A + + E + + D + E Sbjct: 1393 RHGGAPHSLSAAVAHVEPAPESPLSELPEPEVERIELPPLALVEDEIVFDEVPEPEAQSP 1452 Query: 184 TLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAE 243 T+ V + + E + + E D E Sbjct: 1453 TVESVEPPLPQALPAVDETLPEPQSMTLANWHDERDPELVEIFLEEGFDIIDSAGAALQR 1512 Query: 244 QAPTGRVEREKTTRSNESTSIR--VAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 E + +++ + ++ ++ +L EL L + Sbjct: 1513 WMANVDNSIELEALQRDLHTLKGGARMAEIREIGDLAHEL----EFLYEDLGAGRLRASP 1568 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMP 328 +L + ++ ++V R++P Sbjct: 1569 ELFGLLQACHDRLAEMLDAVRGQRVVP 1595 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 87/259 (33%), Gaps = 4/259 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E +++ L ++ +L A+ R H++KGGA + + Sbjct: 1488 DPELVEIFLEEGFDIIDSAGAALQRWMANVDNSIELEALQRDLHTLKGGARMAEIREIGD 1547 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L ++ G ++ + ++ L D + E LDA + + + + ++ Sbjct: 1548 LAHELEFLYEDLGAGRLRASPELFGLLQACHDRLAEMLDAVR--GQRVVPQGTALIETIK 1605 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + ++ + + D + S I ++ +E +G T Sbjct: 1606 RF--RGNPNEQLSIPQAVQLKAVVDSDAAEEADSDILDIFLEEGDDLLEAMEAVIGRFET 1663 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 D V + + IL + + + E + + P Q Sbjct: 1664 QRDDVSAIEEMQRILHTLKGGARLAGQKRLGDLSHDLEQHLTEALQQGAPWPESLFLDVQ 1723 Query: 245 APTGRVEREKTTRSNESTS 263 + +++E ++ Sbjct: 1724 SGFEGLQQELDLLRQRLSA 1742 Score = 89.9 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 76/243 (31%), Gaps = 5/243 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + F +EA E+L + ++L Q + + E L + RA H++KG VL E Sbjct: 763 DDDLLEVFIEEAGEVLETIAEYLPQWQADTANKEALVEVRRAFHTLKGSGRMVRALVLGE 822 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +ENLL+ ++ + + + L+ +M ++ + + D + Sbjct: 823 LAWSIENLLNRVMDRSIEPSAPVQQVVLDVVALMPALVEEFAAKAQRQRDDVDLLAATAH 882 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG-----EVDLLEEEL 179 LA +A V D + + +D + Sbjct: 883 ALAKGLTPPKSNAPAAQQVAEPVGVDDATEVVAHDQVPDDEPIAGDSPIDEPLDGEPLDP 942 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 L + + D A++ V + A + ++ + + Sbjct: 943 QLLEIFRNEAETHLDTLVGFLADCAQELPQPVTDSLQRALHTLKGSAYMAGILPVAEIAA 1002 Query: 240 LAA 242 Sbjct: 1003 PLE 1005 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 13/312 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+ L + L E P +++ RA H++KG A G + E Sbjct: 941 DPQLLEIFRNEAETHLDTLVGFLADCAQELPQP-VTDSLQRALHTLKGSAYMAGILPVAE 999 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E L+ E + +Q++ L + + + LD + + ++ Sbjct: 1000 IAAPLEKLVKEFKTNLIQVDLAAAELLSTAEGLFRAGLDNLESQPLAPIPGAEAFLARVQ 1059 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L E E Q + ++ P+ I + + ++ L E+L Sbjct: 1060 ALHQERLASAED-----------ERQAQSGETRDPQLIGIFLAEGMDILLDAEDLLRKWR 1108 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + S + A L V E + + + S + E Sbjct: 1109 EHPSERQELSALLEELTTLGRGAEMAELPQVDELCEALLDLYGAVEEGSLAVSERFFDEA 1168 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + E+V L +L+ E I + LA + + + +L Sbjct: 1169 EKAHEALIGMMDQVAAALQVSPQPERVQALRDLLSE-AIDPNTLALLTPGAEGMEIIELD 1227 Query: 305 TSMGQLQRNARD 316 + + ++ + Sbjct: 1228 QATAEAEQALAE 1239 Score = 80.3 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 93/314 (29%), Gaps = 21/314 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F E ++L D E L + + ++L+A+ ++ GA + E Sbjct: 1082 DPQLIGIFLAEGMDILLDAEDLLRKWREHPSERQELSALLEELTTLGRGAEMAELPQVDE 1141 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 + +L G + ++ + + + + +D + QALR Sbjct: 1142 LCEALLDLYGAVEEGSLAVSERFFDEAEKAHEALIGMMDQVAA--ALQVSPQPERVQALR 1199 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L EA P+ + L+ A+ E ++ + L+ + E E + Sbjct: 1200 DLLSEAI--DPNTLALLTPGAEGMEIIELDQATAEAEQALAEPHSVEPFAEAESVEDAGE 1257 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + A L ++ E + + + A Q + L+ Sbjct: 1258 APQAEDESAAAYADLDEEMVEIFLEEAVDILESAAQALERWLGEPDNTLPLSALQRDLHT 1317 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 G + + + +L EL L R P L Sbjct: 1318 LKGGAR-----------------MAAIRPIGDLGHELESLYEGLVDRRYSHSPALGTLLQ 1360 Query: 305 TSMGQLQRNARDLQ 318 S +L + LQ Sbjct: 1361 QSHDRLAQMLDQLQ 1374 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 98/352 (27%), Gaps = 25/352 (7%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E E L Q L D ++ H + G F ME L Sbjct: 21 EIGETLKQARQALEAFVENPQDPTRMRFCLTYVHQVHGTLQMVEFYGAALLAEEMEQLAK 80 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEA-KGE 133 G + + + + ++ + LD + ++ + LR E E Sbjct: 81 ALMEGRVANQGEALEVLMQAILQLPVYLDRIQTARRDLPMVVLPLLNDLRAARGEKLLSE 140 Query: 134 TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL----------LEEELGHLT 183 T +S + P+ R ++ +L R + + L LG++ Sbjct: 141 TSLFSPDMSARMPALPEGSMVRLRTAELPVLLRKLRQMLQMALVGVIRNQDLATNLGYMA 200 Query: 184 TLTDVVKGADSL-----SAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 + ++ + + E + + + + ++ Sbjct: 201 RVFARLETLCQDAPLGGLWQIASGMVEGLANGSVVNGTSVRTLLRQVDKELKRLVEQGAD 260 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAV----EKVDQLINLVGELVITQSMLAQRSSE 294 + + + S R+ ++D+ + + ++ LA + Sbjct: 261 GINQSAPDELTKNLLFYVAKSPAQSPRIRALKEQYRLDEALPDTDVVDEERARLAGPDRD 320 Query: 295 LDPVNHGDLITSMGQLQRNARDLQESVMSIRMMP--MEYVFSRYPRLVRDLA 344 L +L R L V S R P ++ + + ++ LA Sbjct: 321 AMRSVVAAL---CEELVRVKDSLDLFVRSDRTQPGELDALLAPLKQIADTLA 369 >UniRef50_C7R7A2 CheA signal transduction histidine kinase n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R7A2_KANKD Length = 2213 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 177/653 (27%), Positives = 308/653 (47%), Gaps = 21/653 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + + F EA ELL+ E+ + + + + LN+ R H++K GA + + E Sbjct: 1445 EELAELFLGEASELLSSYEEAIERWSGDLHNTQPLNSAMRNLHTLKSGAKLAAITPIGEL 1504 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 TH +E L++ R N+ ++ + D + E ++ + P+ + + L Sbjct: 1505 THKLEGLVEALARDPRLGNSRWADVLRRSYDQLHEMVEQVRNGHMPEKP--AELLRKLE- 1561 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 + ++ ++ + D++ ++S + + + + +EE Sbjct: 1562 ------------SDKATIESQLDQLDKRDLAESGEQAEVKVVSLADRQKQKEEAAKEAAN 1609 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 DV++ + L E I AD S L+ + Sbjct: 1610 RDVIRVRSEVLDNLVNLSGEASIFRSRLEQQVADLNFNLKEMSSTVDRLREQLRNLEIET 1669 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 + R + + + + +++ + L L+ S L L+ GD Sbjct: 1670 EAQVLYRREISGVDFDEFDPLEMDRYTRQQELTRSLLEAASDLMSIQETLE-TKVGDAEA 1728 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 ++ R +LQ+ +M RM+P + SR R+VR ++ +L K V+L L S E+D++ Sbjct: 1729 TLLAQGRVNTELQDRLMRTRMVPFNSIESRLRRMVRQISTELNKDVDLILE-SEGEMDRT 1787 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +IER++ PL H++RN++DHGIE +R AGK G + LS +G + I++ DDGAG+ Sbjct: 1788 VIERMVAPLDHMLRNAIDHGIESKTERKKAGKVEKGTVHLSLSRRGNEVYIQIQDDGAGI 1847 Query: 426 NRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 ++++ A+A SQG+ N +D E+ LI PGFSTAE VT +SGRGVGMDVV I + Sbjct: 1848 RKDKVRARAISQGMIDESYNPTDRELFRLILQPGFSTAETVTQISGRGVGMDVVHSEILQ 1907 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG + I S++G GTT+ + LP TL+ + VRV E + +PL+ + + ++ Sbjct: 1908 LGGSLNISSEEGQGTTMTVRLPFTLSSNQALMVRVKGEPYAIPLSNITTVARVSAKEVLE 1967 Query: 545 L-AGGERVLEVRGEYLPIVELWKVFNVAGA--KTEATQGIVVILQSGGRRYALLVDQLIG 601 + ++ GE + L ++ + V+I+Q + A+ VD+LIG Sbjct: 1968 IYQDKDKTFSHLGEEFELRYLGQILDRNSDIIPPVDEYVPVLIIQGEDKPIAVHVDELIG 2027 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 ++VVKN+ VPGIS A+ILGDGSV LI+D+ L E A+ A Sbjct: 2028 SREIVVKNIGRQISTVPGISGASILGDGSVVLILDMQTLVDRFHEWDFAHEAG 2080 Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 49/338 (14%), Positives = 110/338 (32%), Gaps = 33/338 (9%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +EA+EL L + E + + + + R H++KG A GFS + + H +E Sbjct: 1262 IFSEEAEELFDSDAALLQKWRQEPNNVKIIAELQRNLHTLKGSARMAGFSPIGDLAHGLE 1321 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIM----------------QEQLDAYK---QSQEP 111 +L + I+L +D + LD + +Q+ Sbjct: 1322 DLYTAITDQLFAASDQAIDLAERAEDQLLAIFNARNTPDQIPSPAAMLDEIQGFISAQKA 1381 Query: 112 DAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGE 171 A + ++ + + + P + + +E + ++ Sbjct: 1382 GRAYVRPQAEDIKPTEIVEEPQQPVEEAKTESPKEENKAEEPEQIKTEEPTQDKGALEEA 1441 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 E L ++++ + GD+ + + + ++P Sbjct: 1442 AWNEELAELFLGEASELLSSYEEAIERWSGDLHNTQPLNSAMRNLHTLKSGAKLAAITPI 1501 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG---------ELV 282 L+ E + S + +R + +++ +++ V EL+ Sbjct: 1502 GELTHKLEGLVEALARDP----RLGNSRWADVLRRSYDQLHEMVEQVRNGHMPEKPAELL 1557 Query: 283 I-TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 +S A S+LD ++ DL S Q + L + Sbjct: 1558 RKLESDKATIESQLDQLDKRDLAESGEQAEVKVVSLAD 1595 Score = 98.8 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 112/336 (33%), Gaps = 14/336 (4%) Query: 7 DFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETT 66 + + F +EADE+L +M L + + + E +N I R H++KG G + + E + Sbjct: 600 EVREIFIEEADEVLEEMHSLLPEWKQDQTNKEAINTIRRNFHTLKGSGRMVGATDIGELS 659 Query: 67 HLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQL 126 +EN+L+ ++ + + E +I+ + + + + + Sbjct: 660 WAIENMLNRLLDHSIEYSPALFVTTEEVANILPKMVKQFAGGERTQYPR-----DLAERA 714 Query: 127 ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLT 186 +KGE + + + E + + +++ + T + Sbjct: 715 NRISKGEIITDIQPHQEQTEEEADQAAEQELFDIFKQEAEGHVTNLEMFANQRQQGITQS 774 Query: 187 DVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET---VEVSPKISTPPVLKLAAE 243 + L G +I ++ ++ + E ++ + + Sbjct: 775 QISDNLLRSLHTLKGVAHIANIQSLTNVIVPVESYFQELKTRELLAEEGDMALIDHTKDL 834 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + S I + K + + GE + Q + ++ + L Sbjct: 835 LRYIISTPEDDQVISVHEDEILQQLSKQQKRFDESGETIQEQGRDPELIKDIFNIASDVL 894 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRL 339 + + +LQE+ R+ + Y+ + RL Sbjct: 895 ------VDIESTNLQETPEKERLEKISYLMASVDRL 924 >UniRef50_A0YJV3 Chemotaxis protein CheA n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YJV3_9CYAN Length = 810 Score = 513 bits (1321), Expect = e-143, Method: Composition-based stats. Identities = 165/669 (24%), Positives = 309/669 (46%), Gaps = 24/669 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 M ++ + + F ++E L +++ L L+ D +L + R AHS+KG AG G Sbjct: 1 MMIEDDELREVFRTASEEHLQNLDDGFLYLEKNPQDLNRLEELLREAHSLKGDAGMLGVK 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + H +ENLL +G + ++++ + + D +++ + + +F + Sbjct: 61 DIATLAHQIENLLGAINQGRVIFSSEVSDCLFQALDALRKLVQEASTGEPSGVKTFQVMA 120 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDE-QSRSQSPRRIILSRLKAGEVDLLEEEL 179 + + PS T LS E + + + P ++ E + Sbjct: 121 SLIAAEGQSSLETQPSNDTHLSEQQTLEVSENIEVETIKPSPKEPPKILLEEPVINLNSS 180 Query: 180 GHLTTLTDVVKGADSLSAIL-----PGDIAEDDIT-AVLCFVIEADQITFETVEVSPKIS 233 + K ++ + L P +D +T IE +++ ++ + Sbjct: 181 PEEPPQPSLEKPINTSVSSLSYPVNPSPKNDDKVTFDGSTHRIETIRVSTRQLDALMTQT 240 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQL-------INLVGELVITQS 286 + VE S V ++ L + +L S Sbjct: 241 GELTVTKIRIVHRLSEVEALTLLWEEWSRDAFVNRFVLNDLETQSTNTHKAIEQLHNYYS 300 Query: 287 MLAQRSSELDPV---NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 +Q +L + G L +L+ + +L++ + ++R++P+ +F+R+ R+VRDL Sbjct: 301 RASQHLEKLGALVNQLRGSLYEDTARLELISNELEDDIRTLRLLPLSTIFNRFSRMVRDL 360 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 A + KQVEL + G T DK ++E I DPL HL+RN++DHGIE PE+R GK + + Sbjct: 361 ARQQNKQVELLIEGGETRADKRILEEIKDPLMHLLRNAVDHGIESPEERQQYGKPPIAQI 420 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFS 460 L ++ IEV+DDG G++ E+I A +GL E M+ ++ LIF+PGF+ Sbjct: 421 CLRGYQTATSVVIEVSDDGRGIDPEQIKKTALKRGLYPLEELEIMTSKQLQALIFSPGFT 480 Query: 461 TAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVA 520 T VT++SGRGVGMDVV+ N++++ G V+++S G+T R+ L LA + V V Sbjct: 481 TRTLVTEISGRGVGMDVVRNNVEQLKGRVDLESVPTKGSTFRMQLGTALATTHVLIVGVQ 540 Query: 521 DEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE---A 577 + + +P+ V + ++L + G + ++ + L + +L ++ + + E + Sbjct: 541 NISYGIPVEFVRTTRLVSPSELFTIEGRDTII-FEEQPLSVAQLSELLELESSHKEMNAS 599 Query: 578 TQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDV 637 T ++L+ G + + VD LI + VV+K+ ++V I+ ATILG G V ++++ Sbjct: 600 TTFPCIVLKVGEEKLGVFVDTLIDEQDVVLKSQSQLLKRVRNIAGATILGTGEVCMVLNS 659 Query: 638 SALQAINRE 646 L R+ Sbjct: 660 LDLIKSARK 668 >UniRef50_B3PFF8 Type IV pili sensor histidine kinase/response regulator PilL n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PFF8_CELJU Length = 2336 Score = 512 bits (1319), Expect = e-143, Method: Composition-based stats. Identities = 177/694 (25%), Positives = 312/694 (44%), Gaps = 58/694 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F DEA ELL D+++ L Q + +++ + + R H+ KGGA G L + Sbjct: 1494 DPEIVEIFIDEAGELLEDIDRALQDWQDDWNNSDSVEELKRCLHTFKGGARLAGLVDLGD 1553 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS---------------- 108 +H E +L + +L+ +D + ++ + Sbjct: 1554 QSHDFETMLIDM-DRNTELDQAFFRRVNGYQDQLHAGVEQVRARLNGEAIPSQAPAVTPV 1612 Query: 109 -----QEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRII 163 E D + + L+ + E T S+P ++ Sbjct: 1613 SSYPVSEQPMGDQDLTLEDIPTLSADDVEELEDEPTTFERPGYSKPTIVVDNTREQPSDD 1672 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVK-----------------------GADSLSAILP 200 L + + ++L T++ K + Sbjct: 1673 AQELSSDKPNVLTFAPKAKPAPTNLPKVPGSEFGGLRGTGAQSQHLAARRSGPQEVVKVS 1732 Query: 201 GDIAEDDITAVLCFVIEADQITFETVEVSPKI-STPPVLKLAAEQAPTGRVEREK----- 254 ++ E+ + I ++ + ++S I ++ EQ +E E Sbjct: 1733 AELLEELVNLAGETSISRGRMEQQVSDLSHAIDEMDSTIERLQEQLRRLDIETEAQILFR 1792 Query: 255 -TTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + + +++ QL L L+ + S L L D T + Q R Sbjct: 1793 QEQMAQHEEFDPLEMDRYSQLQQLSRSLIESASDLMDLKYTLAD-KTRDTETLLLQQSRI 1851 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 DLQE +M RM+P + R R+VR A +L K+V+ L ELD++++ER++ P Sbjct: 1852 NTDLQEGLMRSRMVPFSRLVPRLRRIVRQAATELNKEVDFDLDNVEGELDRTVLERMVAP 1911 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L H++RN++DHGIELP++R AAGK++ G ++LS +GG++ I + DDG G+N +R+ K Sbjct: 1912 LEHMLRNAVDHGIELPDERTAAGKSANGRILLSLGREGGDVIIRLIDDGRGINLKRVREK 1971 Query: 434 AASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQ 492 A +GL + +SD +V I GFSTAE+VT +SGRGVGMDVV I+++GG + I Sbjct: 1972 AIERGLMSPDAQLSDQDVIQFILHAGFSTAEKVTQISGRGVGMDVVHSEIKQLGGAMFID 2031 Query: 493 SKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP-LAGGERV 551 S+ G GT I LP T+++ + +++ D+++ +PLN + ++ +L + Sbjct: 2032 SEWGQGTEFTIRLPFTVSVNRALMIQIGDDLYAIPLNTIEGIVRVSPFELEHYYQEPDAR 2091 Query: 552 LEVRGEYLPIVELWKVFNVAGAKT---EATQGIVVILQSGGRRYALLVDQLIGQHQVVVK 608 E E + L + + + ++ VV+++S AL VD+L+G ++VVK Sbjct: 2092 FEYASEEYLVRYLGTMLDSSAQPKLDGQSLPLPVVLVRSAENTVALQVDRLLGSREIVVK 2151 Query: 609 NLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 L + + V G+S AT++GDGSV +I+D+ AL Sbjct: 2152 TLGAQFSAVRGVSGATVMGDGSVVVILDLHALIR 2185 Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 52/353 (14%), Positives = 105/353 (29%), Gaps = 25/353 (7%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E+ + ++ D L RA H++KG G + + E +EN+L+ Sbjct: 769 AGEVTETIGEYFPRWAQNFDDKYSLTEFRRAFHTLKGSGRMVGANEIGELAWSIENMLNR 828 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY----ICQALRQLALEAK 131 ++ +NL ++ + +DA++ Q A+ L Q Sbjct: 829 VIDHTIEPGQIHVNLIRGVVALLPDMIDAFRLDQPNPHAAQAESYRQQAHQLAQGLAPTP 888 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDV-VK 190 + V +A ++ + P + ++L EL TL Sbjct: 889 PAANATVDEPEPIADILLEEVPADEIQPESTADAFAVTDHLELGHLELDDTDTLAPTSDD 948 Query: 191 GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ------ 244 D LS L I A T E + ++ L + Sbjct: 949 ELDDLSQALAELAEAQAIGEDEELHELAPAETSEDTLLDMELVDGDSLDEPSSAEDIVLE 1008 Query: 245 --APTGRVEREKTTRSNESTSIRVAVEKVD------------QLINLVGELVITQSMLAQ 290 +E ++ +R + ++ QL ++ G + + Q Sbjct: 1009 NLPGLEVIEETAIDTDSQEQQLRASYANLELDSEDDIDDPDAQLWDIFGTEALYHLQVVQ 1068 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 + +QR L+ S + + + + R V++L Sbjct: 1069 QFIAHMEAEAPIYEPPSEAMQRALHTLKGSAHMAEITQVAELATPLERFVKEL 1121 Score = 78.0 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 96/287 (33%), Gaps = 10/287 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF-RAAHSIKGGAGTFGFSVLQE 64 + + F EA L ++Q + ++ EAP E + RA H++KG A + + E Sbjct: 1050 AQLWDIFGTEALYHLQVVQQFIAHMEAEAPIYEPPSEAMQRALHTLKGSAHMAEITQVAE 1109 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E + E R ++ +N DI+ L + Q LD K +E + + Sbjct: 1110 LATPLERFVKELRSYQVNINDDILQLLRDAVSYTQVALDQIKAGEEVNIPRLQQFVARVN 1169 Query: 125 QL---------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 +L + E ++A ++ + + I R + L Sbjct: 1170 ELREIHVAPLVRQQELDEHGKRPIDPELLAIFMAEEMNLLLDADQIIAHWRTAPEDTRQL 1229 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 + L LT A G+ + A+L + D + + Sbjct: 1230 VPVMEELRKLTQAAAHAYLPVMAELGEKLQSVYEAILAQQLSCDHSLCNALNHAHTALLD 1289 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELV 282 V +AA Q E ++ V + + Q + ELV Sbjct: 1290 MVDAIAAGQNLQAIPEAVNAELDELLSNEVVTLAALTQDAFHIEELV 1336 Score = 66.8 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 41/330 (12%), Positives = 98/330 (29%), Gaps = 15/330 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F E LL D +Q + + D QL + + A V+ E Sbjct: 1194 DPELLAIFMAEEMNLLLDADQIIAHWRTAPEDTRQLVPVMEELRKLTQAAAHAYLPVMAE 1253 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++++ + ++ + + N + + +DA Q A + + L Sbjct: 1254 LGEKLQSVYEAILAQQLSCDHSLCNALNHAHTALLDMVDAIAAGQNL-QAIPEAVNAELD 1312 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQ----DEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 +L + + + + DE + + A E + G Sbjct: 1313 ELLSNEVVTLAALTQDAFHIEELVDEPYSGDETIAALESPDLPDDGFPAQEASISAAGDG 1372 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP-KISTPPVLK 239 + ++ L + + + L EA + F+ + + L Sbjct: 1373 DDFSAIPELESEFILDEDIEPVALDFFVDDDLASSPEASETRFDDILLEDIAPIDEVALP 1432 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVG-----ELVITQSMLAQRSSE 294 + + P E + + + V+++I E + S +A+ + Sbjct: 1433 VTSLDQPWVEEAPEAAVPETIAPEVSIPEAVVEEVIEPATVEAEPENIAAYSAVAELDED 1492 Query: 295 LD----PVNHGDLITSMGQLQRNARDLQES 320 D + + + + R +D Q+ Sbjct: 1493 FDPEIVEIFIDEAGELLEDIDRALQDWQDD 1522 Score = 44.5 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 29/221 (13%), Positives = 56/221 (25%), Gaps = 2/221 (0%) Query: 13 FDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENL 72 E E L + Q L DA ++ H + G F ME L Sbjct: 17 IHEIGETLKEARQSLENYVENPNDAARIRFCLTHIHQVHGSLQMVEFYGAAMLASEMEQL 76 Query: 73 LDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKG 132 G++ +T+ + + LD K +++ + + LR + E+ Sbjct: 77 TQAMIAGKVANSTEAQEVLMRAILQFPLYLDQVKATRKDNPLVVLPLLNDLRAVRGESLL 136 Query: 133 ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGA 192 A+ + + LK ++ + + Sbjct: 137 TDTKLFVPNLAPARKVSGARLPVTNDNVQFQAMVLKLRQMYQYA--ASGFIRDINPEENL 194 Query: 193 DSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L TA + + +IS Sbjct: 195 AYLHKAFARLQKLTHGTARFALWDICLALVEALEIDALEIS 235 >UniRef50_C8PVN4 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PVN4_9GAMM Length = 2216 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 172/649 (26%), Positives = 290/649 (44%), Gaps = 14/649 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + + +EA EL+ QHL + D L A+ R H+IKGGA G + Sbjct: 1425 DEDILKVYLEEAKELIDSSSQHLQEFRSNNSDLAALQALQRELHTIKGGARMVGAEGIAT 1484 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H ME + +E I NL D + + + P + AL+ Sbjct: 1485 LAHEMETIYEELGSRRKPATRMIGNLLAVCHDWLASAIYVLENKFNPQTPV--ALVAALQ 1542 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL--LEEELGHL 182 Q + + L+ + S Q + L + E E Sbjct: 1543 QFSRKPDSLKEIPNVNLTSQIEQIDIYRSSLGQDTLEVKQRDLSVMPLMTGNFESEQDQS 1602 Query: 183 TTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 + + ++ + S + E I + + + L+ Sbjct: 1603 SLNAETLRISASTMDRMINLSGESAINRSRIEMGISSLSNNIEEMGTTVQRLADQLRRME 1662 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 + + + + ES + +++ L L L + S L + + + Sbjct: 1663 TELEIQILSQIGDEHALESDFDPLEMDQYSALNQLSKSLSESASDLLDIKTTMLD-KTRE 1721 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + QL R DLQE +M R +P + R R++R A +LGK VEL ++ E+ Sbjct: 1722 TENLLLQLSRTQTDLQEGLMDSRTVPFSRITPRLQRVIRQTATELGKSVELRILNDEGEI 1781 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D++++ERI PL H++RN++DHGIE ++R+ +GK+ G + L +GG I I +TDDG Sbjct: 1782 DRNILERITSPLEHMLRNAVDHGIEKSQERIESGKSRTGLITLEVLREGGEIVINLTDDG 1841 Query: 423 AGLNRERILAKAASQGLTVSENMSDD--EVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKR 480 G+N + KA QGL +++ S ++ IF G STA+ V+ +SGRGVGMDVV+ Sbjct: 1842 RGINVNAVRQKAIEQGLISAKDTSLKTLDIMQYIFNAGLSTAKSVSQISGRGVGMDVVQS 1901 Query: 481 NIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREA 540 ++++GG V + S+ G G+ + LPLT+A+ D + VR D+ F +PL + ++ Sbjct: 1902 EVKQLGGVVTVDSESGRGSRFTMRLPLTVAVSDALMVRAGDKYFAVPLVQIERVMRVNID 1961 Query: 541 DLHP-LAGGERVLEVRGEYLPIVELWKVFNVAGAKT----EATQGIVVILQSG-GRRYAL 594 + + + G+ + L ++ + +++ V+I+++ G+R AL Sbjct: 1962 AIANFYTTNADSITIDGQAYRLRYLNQILYGSDPVDALAHQSSSVPVIIIRTDLGQRLAL 2021 Query: 595 LVDQLIGQH-QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 VD + G +VVVK L + GISAATI+GDGSV LI+D+ AL Sbjct: 2022 QVDMIAGSRIEVVVKPLGRQLSHIDGISAATIMGDGSVMLILDLVALMR 2070 Score = 87.6 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 101/300 (33%), Gaps = 15/300 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 SMD D F +EA E+LA++ + + V + + + L I R H++KG G Sbjct: 589 SMD-EDIRDIFIEEAQEVLAELGEKIPVWEVDTHELVALKGIRRGFHTLKGSGRMVGAHQ 647 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + E +EN+L+ G + ++ ++ +T + ++ ++Q + P + Q Sbjct: 648 IGEMCWAVENMLNRVLDGTLAVSDALVGFIKDTHRKLPILVEDFQQQRAPSIDPAVTVLQ 707 Query: 122 A--------LRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 A + E G V S+ + + S + + Sbjct: 708 ATNLLQQQPINTGLPETNGLDNLVSVSDKVAEDSDNMAQSTEVASDVAPSTTGDIHALPE 767 Query: 174 LLEEELGHLTTLTDVV--KGADSLSAILPGDIAEDDITAVLCFVI-EADQITFETVEVSP 230 ++ E LTT+TD V + ++ E + D T + + Sbjct: 768 VVAREYEQLTTVTDAVSDPDIQEIYIEEANEVIETIAPLNQAWQAKPDDFDTLKEIRRGF 827 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVA---VEKVDQLINLVGELVITQSM 287 + A Q E +I V + V +I G L+ + Sbjct: 828 HTLKGSGRMVGANQLGELAWSIENMLNRVLDHTIAVDEGVLRLVSDVIEAFGGLITIFAQ 887 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 36/312 (11%), Positives = 85/312 (27%), Gaps = 8/312 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + + +EA+E++ + Q + D + L I R H++KG G + L E Sbjct: 785 DPDIQEIYIEEANEVIETIAPLNQAWQAKPDDFDTLKEIRRGFHTLKGSGRMVGANQLGE 844 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +EN+L+ + ++ ++ L + + + + Q++ A Sbjct: 845 LAWSIENMLNRVLDHTIAVDEGVLRLVSDVIEAFGGLITIFAQNRTDYPAVIKLWQAVAN 904 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A + + + S + + + V + + Sbjct: 905 SYAKKHGDSFSYHQALSAFGGQVAASPSASHTDVALSSGHATAQTQTVQNVSGISDISSE 964 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + L DI + + L Sbjct: 965 MDVADDVFIEEADELLTDIDNFITHHLGEPATHVPDAILRAFHTLRGGAALIGLNNVYHL 1024 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 + + + R QL+ L + ++ + + D D Sbjct: 1025 SAAVEQALGDLLHNEMPLTAR-------QLLTLQEATDLLRTYIDEHKIHHDVTVIEDNN 1077 Query: 305 TSMGQL-QRNAR 315 + L +R Sbjct: 1078 DIVADLIERLTD 1089 Score = 74.9 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 75/219 (34%), Gaps = 4/219 (1%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 MD++D F +EADELL D++ + E +AI RA H+++GGA G + Sbjct: 964 EMDVAD--DVFIEEADELLTDIDNFITHHLGEPA-THVPDAILRAFHTLRGGAALIGLNN 1020 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDA-ASFDYIC 120 + + +E L + EM L + E D+++ +D +K + + I Sbjct: 1021 VYHLSAAVEQALGDLLHNEMPLTARQLLTLQEATDLLRTYIDEHKIHHDVTVIEDNNDIV 1080 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L + +A E + + D+ + + + E+ Sbjct: 1081 ADLIERLTDANAEPHESSKLTVKDLIALGIDDLLDADQQAQARFAGESEQVSAYAEQLEQ 1140 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEAD 219 + L G A I F D Sbjct: 1141 QASRLAQASAGLSYFIIPSTLQFAYKKIADYPQFSKNED 1179 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 15/323 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + Q F DE + D++ + + + H +KGGA G + + E Sbjct: 1238 DDELLQIFLDEVQTIQPDVQNYYDQWLNNLSNLAVTKELANYMHMLKGGAELLGVTSIAE 1297 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 E + D +G + + D +L + + + QL +Q + D+ Q Sbjct: 1298 MALRGEQVYDAIDKGILASDADTASLVQKLHETIASQLKQVRQ-FSRSFEATDFAQQIDE 1356 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH--L 182 +A + + V A E EQ +S L++ ++ + L Sbjct: 1357 VIAGTVQSRDLVFAVPMIVEANPEESIEQKQSAKEGDSALAKNDPLYIEEIINNFEERRL 1416 Query: 183 TTLTDVVKGADSLSAILPGDIAE-DDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 T D L L D + L + + ++ T Sbjct: 1417 ETWKGQEPDEDILKVYLEEAKELIDSSSQHLQEFRSNNSDLAALQALQRELHTIKGGARM 1476 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI-----TQSMLAQRSSELD 296 + E T E S R + ++G L+ S + ++ + Sbjct: 1477 VGAEGIATLAHEMETIYEELGSRRKPATR------MIGNLLAVCHDWLASAIYVLENKFN 1530 Query: 297 PVNHGDLITSMGQLQRNARDLQE 319 P L+ ++ Q R L+E Sbjct: 1531 PQTPVALVAALQQFSRKPDSLKE 1553 >UniRef50_C0N3I1 Hpt domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N3I1_9GAMM Length = 2018 Score = 512 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 177/660 (26%), Positives = 300/660 (45%), Gaps = 31/660 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 S D + F +EA+ELL + + + R H++KGGA G + Sbjct: 1241 SDLDPDLLEAFTEEAEELLTSSGKAVKDWNASQQSEYDSQQLQRDLHTLKGGARLAGITP 1300 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS--FDYI 119 + + TH E L+ + + D +L L +D + E + K A I Sbjct: 1301 MADLTHQTETLVLAVCDRKRSADEDFFDLLLRCQDKLTEMQEQLKARTAITTALSLIAEI 1360 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQ-SRSQSPRRIILSRLKAGEVDLLEEE 178 + L+ + S + + P+ EQ +P + R++A +D L Sbjct: 1361 SMLIAGEDLQLDERSVSEQQQTDTASHVLPEIEQFLAKSAPTHVEQVRVRADLLDYLTNF 1420 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 G ++ D V S ++ E + + + Sbjct: 1421 AGEVSISRDRVTQQHSAMRQQLHEMEETVARLHDQLRKLEIETETQILF----------- 1469 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPV 298 E N+S + +++ + L L + L S +D + Sbjct: 1470 ------------RYEDEKLKNDSDFDPLELDRFSMIQQLSRGLTESVIDLNDISRSMDTL 1517 Query: 299 NHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGS 358 + T + Q R DLQE +M+ R++P V R R+VR + +LGK+ +L VG Sbjct: 1518 V-KETDTILLQQSRLNTDLQEGLMNTRLLPFSGVIPRLERIVRQTSAELGKKADLISVGD 1576 Query: 359 STELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEV 418 ELD+++++R++ P+ HL+RN++ HGIE P+ RLAAGK G L L E +G + + + Sbjct: 1577 ELELDRTILDRLVAPVEHLLRNAIAHGIEDPDTRLAAGKPDNGQLNLRIEREGSEMVMTL 1636 Query: 419 TDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 +DDG GL+ ++I KA S L + ++DE+ LI GFSTA+ V+ +SGRGVGMDV Sbjct: 1637 SDDGQGLDVDKIREKALSLNLIQLDSTPTEDELIQLILTSGFSTADNVSQLSGRGVGMDV 1696 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 V I+ + G + IQS+ G GTT I +P+TL+++ + VRV DE + +PL +V + Sbjct: 1697 VNNEIRSLKGRLSIQSQPGEGTTFVIRMPMTLSVIQALLVRVQDEQYAVPLGSVNAGERI 1756 Query: 538 READLHP-LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA--TQGIVVILQSGGRRYAL 594 D+ L + E GE+ L + + + Q +++ +SG R AL Sbjct: 1757 SVHDIKRLLDSNQPHYEFNGEHYDFRSLSSLLDKPLTLPDNPKQQLPLLLFRSGDMRVAL 1816 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 LVD ++ ++V+K++ + I+ ATILGDG V I+D+ L ++ ++ + A Sbjct: 1817 LVDAIVSNREIVLKSIGQQLSHITAINGATILGDGRVVFILDIPTLIETSQSGQLDSNHA 1876 Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 2/311 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+E+L +++ + D L I R H++KG G +V+ E Sbjct: 630 DEEIATIFIEEANEVLTELDGLMPQWITN-NDQAALADIRRYFHTLKGSGRMAGATVIGE 688 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E L+ G + + L +++ ++ L + Q+ A + + + Sbjct: 689 LAWAVEQTLNHVIDGTRPDSDQVKALATQSQQLVPSLLARFTQANMETTAEVEALLALQQ 748 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 Q + T ++ + LS+ E +++ T Sbjct: 749 QCLNPDSPNVETVATSTPEPHITDSAVDN-ELDRDVEFDLSQYTNDETLIIDASEHEPTD 807 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 D L+ + + ++ + V I A+ Sbjct: 808 HGRFAIETDVLTKVELYIRRQKEMESGNNEAELTRSEEAALTSVEAYIRRLTEEDSTAKS 867 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 AP + + T + L T++ +A+ +S++ VN + Sbjct: 868 APQASLSNKLTKVEAYIQRLADETGVERYLRTQAANHQTTENNVAEPASQIPAVNFSSVD 927 Query: 305 TSMGQLQRNAR 315 + R A+ Sbjct: 928 RYLLDKARQAQ 938 Score = 72.2 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 49/335 (14%), Positives = 115/335 (34%), Gaps = 19/335 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIF-RAAHSIKGGAGTFGFSVL 62 + + Q F EA++ +A ++Q L + + Q++ F RA HS+KG A G + Sbjct: 960 EEDELQQIFISEAEQHIAALKQGL----KDIAFSRQIDKTFLRAVHSLKGCANVAGIKPM 1015 Query: 63 QETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDAASFDYICQ 121 ++ + ++ L+ + + L T + +++ L + ++++EPD I Sbjct: 1016 GLIATDLDQAIKRLHSYDVVLDAEQMRLLETTVNGLEQILLSLTEKAEEPDIRELSDIIF 1075 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 L +E L V+ + + + ++ L L Sbjct: 1076 QLTPAQVETVSAPVIDPEFLVVLLEETDELLDEYTGQLSHWQQQPNDQENLEALSTTLTK 1135 Query: 182 LTTLTDVVKGADSLSA-------ILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 L K + I ++ + +L E E++ + +S Sbjct: 1136 LQDTATHAKQSVIADIYAGLNKLIQQSQPQDNGLNDLLEKGYEQLNEHIESLLQNKPLSA 1195 Query: 235 P-----PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLA 289 V + ++ E T + + I + + +L +L+ + A Sbjct: 1196 EQNFLDQVEQFLQQRVEIDSPASEVITEHSPTALIDIDETDFELPSDLDPDLLEAFTEEA 1255 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSI 324 + D + Q + +++ LQ + ++ Sbjct: 1256 EELLTSSGKAVKDWN-ASQQSEYDSQQLQRDLHTL 1289 >UniRef50_A9FDD6 Chemotaxis sensor histidine kinase CheA n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FDD6_SORC5 Length = 754 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 200/732 (27%), Positives = 328/732 (44%), Gaps = 96/732 (13%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQP----EAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + FF EA E++ + + LL L D + +N +FRA H++KG AG FG + Sbjct: 6 DRAREEFFSEAQEIVEGLGRDLLALDEAVRTNKVDPDVINDVFRAVHTLKGLAGLFGATR 65 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + +H +E LLD R G ++++ +++L + ++ L K ++ D + + Sbjct: 66 MATLSHELEELLDNLRLGRIEVSASVLDLLFRSVELYGRILQNEKDGRDAPMPEVDDLLR 125 Query: 122 ALRQLALEAKGETPSAVTRLSV---VAKSEPQDEQSRSQSPRRIILSRLKAG----EVDL 174 L Q A + P L +E ++ + R+ + L RL+ +D Sbjct: 126 QLHQDAGPSAAGLPDDNYDLDPGLLSVLTEYEEHRLRTNIASGMTLFRLRVQFHLATIDQ 185 Query: 175 LEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIST 234 ++L + A D E DI +E Q + + Sbjct: 186 ALDDLKITAKPYGEIITYLPTGAGADQDSIELDILMASRAPLEELQRALHQAGAAVEEIP 245 Query: 235 PPVLKLAAEQAPTGRVEREKTTR------------------------------------- 257 AP G R Sbjct: 246 RRNNNGHGRVAPPGMPSMSAALRGGAPTGVSRAVDLTGSMSAASPPSSARGNRKGELSSI 305 Query: 258 SNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG-----DLITSMGQLQR 312 + + ++RV + K+D+L+N+VGEL + +S L + L DL R Sbjct: 306 RSVAQTVRVDIHKLDRLMNIVGELALVRSALGRLVERLRAAPTERELSLDLHRLQRTFDR 365 Query: 313 NARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIID 372 + +Q ++ +RM+P+ VF + R+VR ++ K V L + G+ TE+DK ++E + D Sbjct: 366 HLAQMQAGILEVRMVPLGQVFDKLARVVRQISRDADKLVNLVITGAETEVDKLIVEELSD 425 Query: 373 PLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILA 432 PL H++RN++DHGIE R A GK +VG + L+A +G ++ IE+ DDG G++ +++L Sbjct: 426 PLMHMMRNAIDHGIESKSMREAVGKPAVGTIALNAFQKGNHVVIEIEDDGKGIDVDKLLD 485 Query: 433 KAASQGLTVSENM---SDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHV 489 A +G+ E+ S EV LIF PG ST V+++SGRGVGMDVVK NI K+GG + Sbjct: 486 AALRRGVMTPEDARTTSYREVLNLIFQPGISTKTDVSELSGRGVGMDVVKTNISKLGGVI 545 Query: 490 EIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGE 549 ++ S+ G GT + + LP+TLAI+ + VRVAD +F +PL V E++ EA + + G E Sbjct: 546 DVHSEPGIGTKMTVTLPITLAIISALIVRVADRLFAIPLTNVQEAVALDEATVRQIDGRE 605 Query: 550 RVLEVRGEYLPIVELWKVFNVAGAKT---------------------------------- 575 ++ +R L + L ++F + + Sbjct: 606 -MITLRNSTLQLCYLARLFGLNEEEELSARIAGLLGGARGGSAARAAVGGGRRGDGGRAT 664 Query: 576 -----EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGS 630 + + +V+ G RR L+V LIGQ VV+K L + V G S AT LGD Sbjct: 665 LGLQGGSKRKYIVVASVGARRLGLVVSTLIGQQDVVIKALGPSLSSVRGFSGATELGDQR 724 Query: 631 VALIVDVSALQA 642 +AL++D AL Sbjct: 725 IALVLDAPALIE 736 >UniRef50_B1XWD3 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWD3_LEPCP Length = 750 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 233/737 (31%), Positives = 359/737 (48%), Gaps = 100/737 (13%) Query: 1 MSMD--ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58 M+ D ++ + F +EAD+LL E+ LL L+ + D E LNA FRAAH+IKG AG FG Sbjct: 1 MTDDDILAAAREGFLEEADQLLQQFEESLLGLESDPQDFELLNAAFRAAHTIKGTAGLFG 60 Query: 59 FSVLQETTHLMENLLDEAR-------------------------------RGEMQLNTDI 87 + TH +E L++ R RG ++L Sbjct: 61 CDAVVGFTHEVETLMEALRSGELAVSEAIFAALLQARDQMGRLLEEVRADRGTLELCDAD 120 Query: 88 INLF-LETKDIMQEQ-----LDAYKQSQEPDAASF----------------DYICQALRQ 125 + D ++ L A PD D + L Sbjct: 121 VQAMSQRQADELRALMGLAPLGAATHDGAPDTPVAPAAGAGLWHLSLRFGGDALRNGLDP 180 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ---------SPRRIILSRLKAGEVDLLE 176 L+ +T V + V S P+ + + ++ +L+ Sbjct: 181 LSFIRYLDTVGTVAAIDTVCDSLPELAELDPEHCHLGFEIRLASSADRQAIEQVFEFVLD 240 Query: 177 EELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIE------------------- 217 + L D L G A+ + ++ + Sbjct: 241 DCSLQLLAPDASAADYDRLLDQRSGGDADAREALLQRWLAQGVPLALRPAVPAAAANALP 300 Query: 218 ------ADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKV 271 A E +P ++ + + R K R +++ +RV+ +K+ Sbjct: 301 PTGSNPAADTPDLPPESAPVVAIERRDGERERRKESERRAGAKDRRGDDTRFLRVSADKL 360 Query: 272 DQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEY 331 D LI+L+GELVI S + + + ++ ++ ++ + +RM+P+ Sbjct: 361 DHLIDLIGELVIAGSGAELVAQREQSPA---FMEAALRIHDLVQEARDGALGLRMVPIGE 417 Query: 332 VFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEK 391 F+R+ R+VRD++ LGK VEL + G TE+DKS++E I DPL HLVRNSLDHGIE ++ Sbjct: 418 TFARFQRVVRDVSKALGKDVELEITGGDTEMDKSMVEAIADPLMHLVRNSLDHGIEGGDE 477 Query: 392 RLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEV 450 R A+GKN G L L+A H+ G I IEV+DDG GL RERILAKA +GL + ++D EV Sbjct: 478 RAASGKNPRGKLALNAYHESGQIVIEVSDDGRGLARERILAKAIERGLIDGDTVLTDAEV 537 Query: 451 AMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLA 510 +LIFAPGFSTAE+VTD+SGRGVGMDVVKRNI + GH++I S G GTT++I LPLTLA Sbjct: 538 NLLIFAPGFSTAEKVTDISGRGVGMDVVKRNIDALRGHIQIASTVGRGTTMQIRLPLTLA 597 Query: 511 ILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG-----ERVLEVRGEYLPIVELW 565 I+DG + D +++PL V+E ++ A +GG ++RGE LP V+L Sbjct: 598 IIDGFLTSIGDVHYVVPLEGVVECIETPPACRAGASGGVGPRLSGCFDLRGEVLPYVDLR 657 Query: 566 KVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATI 625 F + A + ++++++ + LLVD+L+G+HQ V+K L ++++PGI+ +TI Sbjct: 658 TCFQLRSAPP--ARQSMLLVRTATSKVGLLVDRLLGEHQTVLKPLGRVFQQLPGIAGSTI 715 Query: 626 LGDGSVALIVDVSALQA 642 LG G VAL++D+ +L + Sbjct: 716 LGSGEVALVLDIPSLMS 732 >UniRef50_C7I5C3 CheA signal transduction histidine kinase n=1 Tax=Thiomonas intermedia K12 RepID=C7I5C3_THIIN Length = 1989 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 177/655 (27%), Positives = 288/655 (43%), Gaps = 29/655 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + F +EA+ELL + L + D RA H++KG A G L + Sbjct: 1179 DPDLFPIFEEEANELLPALAASLRQWEQHPQDTAPAAQAMRALHTLKGSARMAGAMQLGD 1238 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+ +D ++ + L D + + D + + + + Sbjct: 1239 LAHSLESDIDTL-TANTPVSEADLAELLGRFDHLNTRFDRLCSAAQRGESQLADL----- 1292 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 +A ++ TPSA + A+ P + + + + + G L Sbjct: 1293 PVATVSEVFTPSAEPDTAASAQPLPAVAVNTAAAAEPVNRVLAPRIAAQAVRVRAGLLDR 1352 Query: 185 LTDVVKGADSLSAILPGD--IAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAA 242 L + A L + + + + Q E + + V Sbjct: 1353 LVNQAGEITISRARLENEFGAIRASVGDLSDNLDRLRQQVREIEIQAEAQMSAQVQAARD 1412 Query: 243 EQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E +E ++ TR+ E T R+ E V+ + + G L + Sbjct: 1413 ENRDFDPLEFDRFTRAQELT--RMMAESVNDIAMVQGTL---------------SRLLRE 1455 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 + M + R R+LQ ++ RM+ + + R R VR A LGK V L ++G + EL Sbjct: 1456 VDDDMTRQARQTRELQRDLLRTRMVEFDSLSERLYRTVRQAAKDLGKAVRLEIIGGAIEL 1515 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+ ++ER+ HL+RN++ HGIE E+R AAGK VG L LS G + I + DDG Sbjct: 1516 DRGVLERVSSSFDHLLRNAVAHGIETAEERKAAGKPEVGTLTLSLRQDGNEVVITLADDG 1575 Query: 423 AGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRN 481 GLN I AKA GL +N+S+ E+ L+F P FS+AE T V+GRGVG+DVV+ Sbjct: 1576 RGLNYAAIRAKAERLGLLAPGQNVSEAELTQLVFRPNFSSAESTTAVAGRGVGLDVVRTE 1635 Query: 482 IQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREAD 541 + +GG V + ++ G+G +LLPLT AI + +R V+ +P N V L+ + Sbjct: 1636 VNALGGRVLLDNQPGSGARFTLLLPLTTAITHVVLLRTGAAVYAVPANLVDIVLRFKPEQ 1695 Query: 542 LHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEA--TQGIVVILQSGGRRYALLVDQL 599 + A +E LP L + +G +E VV+++S +R A+ VD++ Sbjct: 1696 IANAA-RTLSIEYANNTLPFYWLGALLGQSGGSSEPFGKSVPVVVIRSATQRVAIQVDEV 1754 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTAA 654 +G +VVVKNL +VPG++ ++L +G ALI + AL A+ A A Sbjct: 1755 VGNREVVVKNLGPQLSRVPGLAGISVLPNGDAALIYNPVALAAVYGADASARMQA 1809 Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 45/278 (16%), Positives = 93/278 (33%), Gaps = 2/278 (0%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F +EA E++A + L L D L ++ RA H++KG + G E Sbjct: 713 DELIDIFLEEAREVIASGHEQLQQLHANLDDEGALTSLRRAFHTLKGSSRMVGLRDYGEA 772 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 +E + + + + + ++NL + E A +Q Q +A S + + +A Sbjct: 773 AWALEQVFNRQIADQHRASPPLLNLAAHALTELGEWTAAIQQGQ-AEAFSSEPLRRAAEA 831 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A E P+ T + E + ++ E + L Sbjct: 832 YAAGESAE-PALPTLHDAPNELSMAAEPAAVEATESPGEPAAPEPEALHEPTDFNALFEG 890 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 D+ + + + A + +D E +V ++A+ A Sbjct: 891 IDLELPHHTQAPEPMPSAEMSTVEAPPAEMPSSDAPAVELPQVEEADMAEFEAAVSAQYA 950 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVI 283 P + ++ + ++ + +GEL I Sbjct: 951 PPADTAADTAADTDIAPVPPENSDEGEPGYRQIGELRI 988 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 25/332 (7%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Y + EADEL + + + A +A +AH + G + T G + + Sbjct: 992 LYNIYLAEADELSRHLYSDIHDWLTDPAQA-LGDAAVISAHKLAGSSATVGLRSVADLAS 1050 Query: 68 LMENLLDEARRGEMQLN-TDIINLFLETKDIMQEQLDAYKQS--QEPDAASFDYICQALR 124 E+ LD R ++ + +++ L + + A + Sbjct: 1051 QTEHALDALRDLPAHATRPADLDALAQAASDIKQLLHQFAAGFLKPVQAELLTRLEALQE 1110 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 ++ + +VT L+ A+ Q EQ + A + + Sbjct: 1111 AALAQSAQPSAESVTELTHAAEPAVQPEQIAAPELAPATREPASAETLQPQASATQSAAS 1170 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 +V D + + A + + A+ + + +Q +T + + LK +A Sbjct: 1171 ADQLVDTIDPDLFPIFEEEANELLPALAASLRQWEQHPQDTAPAAQAMRALHTLKGSARM 1230 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 A ++ + ++ ++ ++++ LA+ D +N Sbjct: 1231 AGAMQLGDLAHSLESDIDTLTANTP-------------VSEADLAELLGRFDHLNT---- 1273 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 + R Q + +P+ V + Sbjct: 1274 ----RFDRLCSAAQRGESQLADLPVATVSEVF 1301 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 39/316 (12%), Positives = 88/316 (27%), Gaps = 29/316 (9%) Query: 13 FDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENL 72 E ++ +E+ L + L + R ++G G V + + Sbjct: 477 VQELRADMSTVEKLLDAYFRDPSHKPDLAQVPRLLSQMRGVFSVLGVDVASQALSYLRTE 536 Query: 73 LDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKG 132 +D ++ ++ + ++ +D + + + L + K Sbjct: 537 IDSLVADDVPTDSQRFDALASNIGVLGFLVDML--------SYQPELAKTLFVFDNDKKE 588 Query: 133 ETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGA 192 + + QD + +Q + I L + +L V Sbjct: 589 LRAVVPSTQRTAPPTLQQDVEHAAQQLKDDIAQGLPPEQAQQRLAQL-RAEAALAGVPDL 647 Query: 193 DSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVER 252 + +P + + ++ E + + P Q T E Sbjct: 648 PAQMLSVPSEGVSELLSEPHTPQEIDAAPAQEASATPAEPTVTPESAPEPAQEATPPAEP 707 Query: 253 EKTTRSNESTSIRVAVEKVDQLINLVGELVIT-QSMLAQRSSELDPVNHGDLITSMGQLQ 311 E E +D + E++ + L Q + LD ++ L+ Sbjct: 708 EDDAED----------ELIDIFLEEAREVIASGHEQLQQLHANLDD------EGALTSLR 751 Query: 312 RNARDLQESVMSIRMM 327 R L+ S RM+ Sbjct: 752 RAFHTLKG---SSRMV 764 Score = 41.8 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 88/322 (27%), Gaps = 15/322 (4%) Query: 47 AHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYK 106 H G GF EN LD+ +L+ + F + + + L++ + Sbjct: 69 VHQAAGAIELLGFFGAARLMQAAENALDQLIDHPEKLDNTALQRFEAGFNALVDFLESQR 128 Query: 107 QSQEPDAASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR 166 + A + L +LA + + P + + + +P R Sbjct: 129 AGKNEPALKLYPQYRDLMELAQAERIHPADLWDYDWTWPDAPPVTDVAGAPAPMLTPDDR 188 Query: 167 LKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAE--DDITAVLCFVIEADQITFE 224 + L + + + + L I + +T + Sbjct: 189 AQFEMGLLQVLRGQQTASAMQTLDAVARRAQASSAGPTASLWWLARGLFEAIGSGLLTPD 248 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIR----VAVEKVDQLINLVGE 280 L+ + + S+ V + + L + Sbjct: 249 LDIKRLLNRLNLQLRSQLQGQSPAPQRLGHDLTFFCAQSLHGNGDVTAQSLPVLRAIDNR 308 Query: 281 LVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESV---MSIRMMPMEYVFSRYP 337 L + + A + L+ + + + RD ++ + P +R Sbjct: 309 LHLAAAPFADYHQSHFGLIDPALVQQVRKRVQTLRDAWSALAGHAQTHLDP-----ARMA 363 Query: 338 RLVRDLAGKLGKQVELTLVGSS 359 RLV DL L + + GS Sbjct: 364 RLV-DLTQALEQPLHALTPGSE 384 >UniRef50_D1UAD1 CheA signal transduction histidine kinase n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1UAD1_9DELT Length = 725 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 231/725 (31%), Positives = 336/725 (46%), Gaps = 88/725 (12%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D++ Q F +EA +LL ++E LL L+ D +N IFRA H+IKG FGF Sbjct: 1 MSDDLN--RQIFKEEAYDLLGELEGALLELEESPDDMALVNQIFRALHTIKGSGSMFGFD 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH +E+ D R + + ++ L L ++D ++ L A + E D+ I Sbjct: 59 DIAAFTHEVESTFDMVRNNALGVTPELCGLALRSRDYIKLLLGATE-GDEVDSTERQAIL 117 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSR------------LK 168 Q L+ L A E S P Sbjct: 118 QGLQALCAGEPVAGAVTPDPADAPAPPEAVQASYVSDEPLAGEFCEYRITLTPKAGTKTD 177 Query: 169 AGEVDLLEEELGHLTTL----TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFE 224 ++ L ELG L A + L DI D++ V FV + Sbjct: 178 ESSLESLFVELGGLGDFQILGRPGDTAAGGWNLSLKTDITADNVRDVFFFVDADLAVDIS 237 Query: 225 TVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIR------------------- 265 E P + T + + + + + R Sbjct: 238 DSEGMPVLVTGALDVSLPAGPARLKADEAAFNEDEDLEAPRLGEILIQSGDVTEADIRDA 297 Query: 266 ----------------VAVEKVDQLINLVGE--------------------------LVI 283 VA EKV+Q + E LV Sbjct: 298 LSKQKPLGQILAEEGKVAPEKVEQAVRRQAEAKEQDASRKQQEALSSIRVAADKLDYLVD 357 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMS----IRMMPMEYVFSRYPRL 339 L +++ V +M L L + + IRM+P+ +S++ RL Sbjct: 358 LVGELVIVQAQITQVVSERNDPTMTALAEELERLSDELRDSTLGIRMLPIGTSYSKFRRL 417 Query: 340 VRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNS 399 VRDL+G LGK++ L VG+ TELDK++IER+ DPL HL+RNS+ HGIELP++R A GK + Sbjct: 418 VRDLSGSLGKEINLVTVGADTELDKTVIERLGDPLVHLLRNSIGHGIELPDERKAQGKPA 477 Query: 400 VGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPG 458 G + LSAEH GG + + + DDG G++ I K +GL ++ ++ ++ LIF PG Sbjct: 478 QGTIYLSAEHSGGEVLVRIKDDGRGMDPTIIREKGIERGLIAADAELTKKDLLKLIFEPG 537 Query: 459 FSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVR 518 FSTA++VT+VSGRGVGMDVVKR I + G +EI S G GT I I LPLTLAI+DG+ VR Sbjct: 538 FSTAKEVTNVSGRGVGMDVVKRAIDSLRGSIEIDSTLGKGTFITIRLPLTLAIIDGLQVR 597 Query: 519 VADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT 578 V D +++PL+ V E ++ +D+ + +R+L +RGE +P V L F V G Sbjct: 598 VGDGYYVIPLSLVEECVELAASDMDE-SSRQRILHLRGEIVPYVHLRDWFGVEGDSPPIE 656 Query: 579 QGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 Q +VI G R ++VD +IG+HQ V+K+L Y+ V GIS ATI GDGS+ALI+D+ Sbjct: 657 Q--IVITGVEGSRVGIVVDTVIGEHQTVIKSLSRVYKDVEGISGATIKGDGSIALILDIP 714 Query: 639 ALQAI 643 +L Sbjct: 715 SLVRR 719 >UniRef50_B5JTR8 CheA signal transduction histidine kinase n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTR8_9GAMM Length = 1780 Score = 510 bits (1313), Expect = e-143, Method: Composition-based stats. Identities = 168/653 (25%), Positives = 295/653 (45%), Gaps = 17/653 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 D + F +E ++L+ + L + D Q + R H++KGGA G + + + Sbjct: 986 DDLVEIFLEEGEDLVQACDNLLHEWEGNDFDKAQAEELQRQLHTLKGGARMAGLTPIGDL 1045 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF--------- 116 +H ME L+ + +++++ + + D + + L + ++ +A Sbjct: 1046 SHAMEELILSVEKEKIEMDDSTMEVLKSVADELTDMLASIRKHGYVVSAQQWVDRLNKLG 1105 Query: 117 --DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDL 174 + + LA E + +E Q +Q + I + A Sbjct: 1106 AGEALDDGGEPLAEEPAPTAEITEAQDKPSLPAEGQSDQPEDPVAKVIDPNDANAKRFAE 1165 Query: 175 LEEELGHLTTLTDVVK-GADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 + ++ AD L +++ + L + + + Sbjct: 1166 TAAPAAMTGATAEQIRVRADRLDSLVNSAGEVSVYHSRLQQQLGGFGFNLGELNQTVDRI 1225 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 V +++ E + + + +++ + L L+ + L Sbjct: 1226 REQVRQVSIETDAQIDSRYAREQENPYDDFDPLEMDRYSHMQQLSRSLMESVHDLEDL-R 1284 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 + D T + Q QR + DLQE +M RM+ + V SR R+VR A +L K+ ++ Sbjct: 1285 DTMSNMVRDSETLLHQQQRVSTDLQEGLMGTRMVRFDGVTSRLRRIVRQTAQQLDKKAQI 1344 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 G E+D+S+ ER++ PL H++RN++ HGIE P++R A GK+ G++ L G Sbjct: 1345 EFEGVDNEVDRSVQERMLAPLEHMLRNAVSHGIEAPQERAAKGKSEQGHINLHIGRDGSF 1404 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I + ++DDGAG++ RI KA +GL + + D EV I GFSTA+QVT +SGRG Sbjct: 1405 IVLTLSDDGAGIDVNRIREKAIERGLMEKGQEVPDQEVMQYILHTGFSTADQVTQISGRG 1464 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV I+ +GG + I+S+ G GTT + LPLTLAI + V ++ + +PL A+ Sbjct: 1465 VGMDVVNSEIKHLGGSLRIESELGHGTTFLVRLPLTLAINQALLVLAGEDTYAIPLTAIE 1524 Query: 533 ESLQPREADL-HPLAGGERVLEVRGEYLPIVELWKVF--NVAGAKTEATQGIVVILQSGG 589 + L GE I L + V G + Q ++++++G Sbjct: 1525 GVARVGGQALSEQYDSDVPQYRYAGEDYDIFYLPSLLKQGVPGELDDEEQYPLLLVRAGE 1584 Query: 590 RRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 RR A+ D+++G+ ++VVK + +PG+S ATIL DG VALI+++S L Sbjct: 1585 RRVAIHADEMLGRREIVVKPVGRQVSTLPGVSGATILDDGRVALILEISGLVQ 1637 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 44/321 (13%), Positives = 108/321 (33%), Gaps = 27/321 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +E +EL+ + + L + EQ+ A+ R H++KGGA + + + Sbjct: 793 DDELVDIFLEECEELIDECDNTLQQCEESGFQEEQIAALQRQMHTLKGGARMAELTPMGD 852 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +H +E + ++GE++ + + + D + + ++ + +A + L Sbjct: 853 LSHALEEAVLGIQQGEVEATEVVTSTLRQAGDQLAAMMQEVQERGQLTSAR--ALVSRLE 910 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 ++ + + + T + + + LE++ Sbjct: 911 RI-RQGEAPAATEQTDAPSESPAVSAVAEVELGDEAEPREVAAAEESGAALEDDSVESGE 969 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + AD ++ + D+ E + V D + E + L+ Sbjct: 970 GAEANSSADKIAVDVNDDLVEIFLEEGEDLVQACDNLLHEWEGNDFDKAQAEELQRQLHT 1029 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 G T + L + + EL+++ ++ Sbjct: 1030 LKGGARMAGLTP--------------IGDLSHAMEELILS----------VEKEKIEMDD 1065 Query: 305 TSMGQLQRNARDLQESVMSIR 325 ++M L+ A +L + + SIR Sbjct: 1066 STMEVLKSVADELTDMLASIR 1086 Score = 89.2 bits (220), Expect = 4e-16, Method: Composition-based stats. Identities = 38/256 (14%), Positives = 86/256 (33%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E L + + + D+E + I R+ H++KG G ++ E +EN+L+ Sbjct: 248 ALEELERISELFPRWRQSPDDSEAITTIRRSFHTLKGSGRLVGAQLIGEFGWAVENMLNR 307 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETP 135 + L+ + N+ +T I+ + ++ ++EP ++D + +A + Sbjct: 308 LLDETISLSDGLYNVVEDTVGILPQLVEQLTGNKEPIEEAYDLMARAWLVADGKDPSAAA 367 Query: 136 SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL 195 AV V + PQ+ + + A + + +L + D + Sbjct: 368 EAVETEQAVEDASPQEASADESVTEEEAMPEPSAEGQESADIDLSGVALSEDDSPSDEEG 427 Query: 196 SAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 +L D ++ V E S + + Sbjct: 428 EGLLDLDEDLTNMAIESSDVDEGADQEEGINAASLDSEGASDDIEFDWSEDLEELSASDS 487 Query: 256 TRSNESTSIRVAVEKV 271 S++ I + ++ Sbjct: 488 EGSSDEGEIDLDFTEL 503 Score = 71.4 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 33/309 (10%), Positives = 90/309 (29%), Gaps = 11/309 (3%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + E + + +E L L+ + E + + RA H+I G + T + + Sbjct: 617 LVDIYSAETMQHVETIENLLGALESD-DQLENSHDLTRALHTIHGSSRTAEMHAVADVAR 675 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAAS------FDYICQ 121 +E ++ + L E ++ L+ D + Q Sbjct: 676 RLEYHGNDQEELGEPWPAASVGLLREATVATRKALECLSDPGAKKPDLVGLLSRIDPLAQ 735 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + + P + ++ + + + E + + Sbjct: 736 ESKARVEANERGQPDPFDEGAAASQQDEDQAPAEPEEELAAAAPTFDTEEETIRVDTDDE 795 Query: 182 LTTL-TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 L + + + E ++ T + +++ L Sbjct: 796 LVDIFLEECEELIDECDNTLQQCEESGFQEEQIAALQRQMHTLKGGARMAELTPMGDLSH 855 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE---LVITQSMLAQRSSELDP 297 A E+A G + E ++++R A +++ ++ V E L ++++++ Sbjct: 856 ALEEAVLGIQQGEVEATEVVTSTLRQAGDQLAAMMQEVQERGQLTSARALVSRLERIRQG 915 Query: 298 VNHGDLITS 306 + Sbjct: 916 EAPAATEQT 924 >UniRef50_Q21EJ5 Response regulator receiver n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21EJ5_SACD2 Length = 2336 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 180/675 (26%), Positives = 304/675 (45%), Gaps = 27/675 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 D + F +EADEL ++++ + + + +AE I RA H++KGGA G + L E Sbjct: 1525 DEDIVEVFLEEADELCEELDEAIHTWESDWSNAEPSEIIKRALHTLKGGARLSGMNNLGE 1584 Query: 65 TTHLMENL-----LDEARRGEMQLNTDIINLFLETKDIMQEQL----DAYKQSQEPDAAS 115 TH E+ D + L + + + S+EP Sbjct: 1585 LTHEYESYIIGTDFDSTDEAFFAQLHSYQDKVLRGVRALHQFMRGDAAQVVASEEPTLGD 1644 Query: 116 FDYICQALRQLALEAKGETPSAVTRLS-VVAKSEPQDEQSRSQSPRRIILSRL---KAGE 171 + + + +A+ + +T A S +++ I +R +G Sbjct: 1645 VELVEEDEAGIAMVKQAQTSEAPATNDGEPGSSNVVPFAPKTKDESGFIPTRPKEEDSGF 1704 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 V + + +P D+ E+ + I ++ + + Sbjct: 1705 VMPHASGGAQAAPQVAMKRSGPQEVVKVPADLLEELVNLAGETSISRGRLEQQVNDFGGA 1764 Query: 232 IST-PPVLKLAAEQAPTGRVEREKTTRSNEST-------SIRVAVEKVDQLINLVGELVI 283 + + EQ +E E + + +++ QL L L+ Sbjct: 1765 LEEIDGTIHRLQEQLRRLDIETEAQIIFRQEQIAESDRNFDPLEMDRYSQLQQLSRSLIE 1824 Query: 284 TQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDL 343 + S LA S L D T + Q R LQE +M RM+P + R R+VR + Sbjct: 1825 SASDLADLRSTLTD-KVRDTETLLLQQSRINSTLQEGLMRSRMVPFSRLVPRLRRIVRQV 1883 Query: 344 AGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNL 403 + +LGK V L ELD+S++ER++ PL H++RN++DHGIE+P+ R AGK+ G + Sbjct: 1884 SSELGKSVTFELDNIEGELDRSVLERMVAPLEHMLRNAVDHGIEMPDVRANAGKSETGRI 1943 Query: 404 ILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTA 462 +L+ +GG++ + + DDG G++ +R+ KA +GL V + +SD ++ I GFSTA Sbjct: 1944 VLTLGREGGDVTLRLADDGRGIDLKRVREKAIERGLMVDDATLSDRDIMQFILHAGFSTA 2003 Query: 463 EQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADE 522 E VT +SGRGVGMDVV I+++GG V I S+ G GT + LP T+++ + V + + Sbjct: 2004 ESVTQISGRGVGMDVVHAEIKQLGGSVSINSEWGKGTEFLVRLPFTVSVNRALMVALGSD 2063 Query: 523 VFILPLNAVMESLQPREADLHP-LAGGERVLEVRGEYLPIVELWKVF--NVAGA-KTEAT 578 F +PLN + ++ +L E E GE + L + + ++ Sbjct: 2064 YFAVPLNNIEGIVRVSPFELEHYYQNPEARFEYAGENYQVRYLGSMLIDGMRAKLDGQSL 2123 Query: 579 QGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVS 638 V++++S AL VD L+G ++VVK+L + V G+S AT++GDGSV +I+D Sbjct: 2124 PLPVLLVRSAEHTMALQVDTLLGSREIVVKSLGQQFSTVQGLSGATVMGDGSVVVILDPH 2183 Query: 639 ALQAINREQRMANTA 653 AL A A Sbjct: 2184 ALVRKEMALATAAIA 2198 Score = 87.2 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 88/276 (31%), Gaps = 12/276 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F E LL + +Q L Q + E+++ + R +++ GA + Sbjct: 1052 DPRLLSIFMAEEMTLLLEADQLLAQWQSNPGELERIDDVIRELTTLEQGAQQANLPDMAS 1111 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 + + + ++ +QL+ L + + + +DA Q +Y+ A+ Sbjct: 1112 LSQRLSTVHGHIKQNNLQLDEGFFETLLAGHNALLDMVDAVAAGQN-MVPPQEYVVAAIE 1170 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 L A+ + Q ++ + + L E Sbjct: 1171 SLIHSAEANAATRA-----------DAPQFDTEQADEFGSEEIIIEDFSELNELESETEA 1219 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + P D++E F A + E+ ++ + S A E+ Sbjct: 1220 EQQSELQGEQAEQLNPQDLSEPTSEEAFSFGEAAADASNESFDLGEQTSETVEFDNAQEE 1279 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGE 280 APT + + + ++ D ++LV E Sbjct: 1280 APTAADQSDTLAFAIDAEDADEISAGDDDYLDLVVE 1315 Score = 68.7 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 32/233 (13%), Positives = 78/233 (33%), Gaps = 4/233 (1%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E+L +E++ + + D + L + RA H++KG + E +EN+L+ Sbjct: 746 AGEVLETLEEYFPKWRADPTDNDSLVIVRRAFHTLKGSGRMVEAYDVGELAWSVENMLNR 805 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYI----CQALRQLALEAK 131 + N ++ ++A+K + AL + ++ + Sbjct: 806 IIDKTVPYTAAHGNFIQLVLELTPTLVEAFKNRTANPQKALTETYMGYGAALAEGSIPDE 865 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 + + + A E +Q P + E D + +E+ + + Sbjct: 866 VKELAGSDAATDSAAQEEHAQQETEAPPAYYVEEDEDDDEDDRVLKEIFSSEARSHLATI 925 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + T L + + + + +V+ L+ A++ Sbjct: 926 QQFVDEMEAAAPIYTPPTDSLQRALHTLKGSAKMAQVTLIAEMAEPLENFAKE 978 Score = 43.7 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 36/247 (14%), Positives = 71/247 (28%), Gaps = 7/247 (2%) Query: 15 EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLD 74 E + L D Q L + D+ ++ H + G F ME+ Sbjct: 16 EISDTLKDARQALEAYVEDPKDSTRMRFCLTHIHQVHGSLQMVEFHGASLLAEEMEHTAQ 75 Query: 75 EARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGET 134 ++ + + + + + LD K +E + LR + ++ Sbjct: 76 AIINNDVASAPEAQEVLMRSMLQLPIYLDHVKIHKEDHPGVVLPLLNDLRAVRKQSFLSE 135 Query: 135 PSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEE-------LGHLTTLTD 187 + + A+ + +Q ++ K E+ + T D Sbjct: 136 TNLFSPDMSAAERKSVKPHPVTQDAAKLTQVLKKLREMYQFSAASVLRGIKIDENLTYID 195 Query: 188 VVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPT 247 V G L A DI+A L + D + L++ E+AP Sbjct: 196 KVMGRLELLTRGTTCHATWDISAALVDALRRDDLELSVAVRGLLRFLARELRILGEKAPQ 255 Query: 248 GRVEREK 254 + Sbjct: 256 SLARKPP 262 >UniRef50_B6YX73 CheA chemotaxis histidine kinase n=2 Tax=Thermococcus RepID=B6YX73_THEON Length = 781 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 173/588 (29%), Positives = 305/588 (51%), Gaps = 36/588 (6%) Query: 90 LFLETKDIMQEQLD-----AYKQSQEPDAASFDYICQ---ALRQLALEAKGETPSAVTRL 141 L L + + E ++ + + D +++ + +L + Sbjct: 199 LILSDLEELGEIIETKPGREIIEDGKADVDVLEFVVATEESPERLKHVVTRHPEVERVEV 258 Query: 142 SVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPG 201 + Q+ ++ + + + LK L+ ++L L T+ + ++ Sbjct: 259 EEYHPAAGQENKTYTVTVYIQKDAPLKGVRSYLILQDLQKLGTVQRTIPDTVAIQNGDII 318 Query: 202 D------------IAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 D + D + V D E + + EQ + Sbjct: 319 DGHYFKVLMVSNVLPNDIVKIVRKHPDVEDVKVEEGDSIEVETKEETEKSRGPEQQAEKK 378 Query: 250 VEREKT-------TRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGD 302 E + + S I+V V +D+L+NLVGELVIT+ L Q + L + Sbjct: 379 AESKPQKLKTVQTPKVKVSKIIKVDVSHLDRLMNLVGELVITKGRLEQIAERL---GDRE 435 Query: 303 LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTEL 362 L+ ++ L R +LQ+ +M +R+ P+ VF+++PR+VR+LA K+GK+VE + G+ E+ Sbjct: 436 LLETLSTLSRLLTELQDEIMEMRLTPVAEVFNKFPRMVRELARKMGKEVEFIVEGADIEV 495 Query: 363 DKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDG 422 D+++++++ D L HL+RN++DHGIE P++R GK G L L A+ + ++ I V DDG Sbjct: 496 DRTILDKLGDVLVHLLRNAIDHGIESPDEREKLGKPRTGKLELIAKRERSHVEIIVRDDG 555 Query: 423 AGLNRERILAKAASQGLTVSE---NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVK 479 G++ E+I KA +GL E MSD+E LIF PGFST EQVTDVSGRGVGMDVVK Sbjct: 556 RGIDPEKIKRKAIEKGLITPERAAEMSDEEAINLIFLPGFSTKEQVTDVSGRGVGMDVVK 615 Query: 480 RNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPRE 539 ++ + G + +QS+ G G+T + LP+++AI+ + + V EV+ +P+N ++ES++ + Sbjct: 616 DVVKSLNGTISVQSEVGKGSTFILKLPVSMAIIQALLIEVQGEVYAVPINNILESIEIKR 675 Query: 540 ADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQL 599 +L + GG+ V+ +RGE +P++ L ++F + E + +++ G ++ A+ VD+L Sbjct: 676 ENLKSI-GGKDVIVLRGEIIPVIMLHELFGLP--IPEKDEFPAIVVDLGAQKVAIGVDEL 732 Query: 600 IGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 + + +V+K+L + G + ATILGDGSV LI++++ L R Sbjct: 733 LHKKDIVIKSLGKMLSHISGFAGATILGDGSVVLIIEINGLLGGGRSG 780 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 51/242 (21%), Positives = 93/242 (38%), Gaps = 8/242 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGA 54 D+S + F +A + + + +L L+ E ++ IFR AH++KG A Sbjct: 1 MEDLSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKKAMIDQIFRDAHTLKGTA 60 Query: 55 GTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAY-KQSQEPDA 113 T GF L E H MENL D R G+++ D+I++ LE D+++ +D+ + E D Sbjct: 61 ATMGFMKLSEVAHKMENLFDLVRGGKIEPTPDLIDVLLEFLDVIEGMVDSIEENGNEGDF 120 Query: 114 ASFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD 173 + +A + E ++ T+ E E++ +++ R Sbjct: 121 DVGELFEKAQKFFERSRPVEKAASSTQPKEPLTGEKTPEEAGAEAERTAPSGEKGELPRY 180 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 ++ L V G+I E + +AD E V + + Sbjct: 181 RIKVYFHKDAQLRGVRAFLILSDLEELGEIIETKPGREIIEDGKADVDVLEFVVATEESP 240 Query: 234 TP 235 Sbjct: 241 ER 242 >UniRef50_A1ZV35 Chemotaxis protein CheA n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZV35_9SPHI Length = 671 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 188/672 (27%), Positives = 326/672 (48%), Gaps = 33/672 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +S F + F E+ ++L D+E L+ L+ + + E LN IFR H+IKGGA G L Sbjct: 1 MSQFSEKFIQESQDMLTDLESDLIELEKDLSNEEYLNNIFRYLHTIKGGALMIGLDHLGS 60 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E + R G +++ I++L + D +++ L + + + L+ Sbjct: 61 FIHEIEAIFALLRDGAKKIDDQILSLSFQAVDHIKKVLKDPNLTDHFLKENQQNLIAVLK 120 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVD--------LLE 176 QL + + V + ++ + II + E Sbjct: 121 QLQNQDQNLENIVPKMNYVYGMTIKPISPLKTDTEHPIIFVIKELKSTYENYFLKRIAHE 180 Query: 177 EELGHLTTLTDVVKGADSLSA-------ILPGDIAEDDITAVLCFVIEADQITFETVEVS 229 EE+ + D V D L A I E + + E ++ Sbjct: 181 EEILFWFIIVDQVSEKDELEALFLFVEDDFEISIQELGSSEDFHLSEQMKTKLNEQIQDK 240 Query: 230 PKIST----PPVLKLAAEQAPTGRVEREKTTRS---------NESTSIRVAVEKVDQLIN 276 ++ + + +EQ + E S + S R++ KV++LIN Sbjct: 241 KELPSLEDTKKIFANLSEQVSKNKPEVASQDNSTAINENKANERTGSTRISKYKVNRLIN 300 Query: 277 LVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRY 336 V EL+ S L +S DL +++ L+E V S+ + P+ + +++ Sbjct: 301 AVSELMTLNSSLKNIASTHS---LNDLNLITEKIELEINHLREDVFSLNLRPLSTLNTQF 357 Query: 337 PRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAG 396 R+VR+L+ + GK+VE +VG TELDK +IE + +PL H++RNS+DHGIE E+RL Sbjct: 358 KRMVRNLSKQQGKKVEFEMVGGDTELDKHMIESLENPLLHILRNSIDHGIEPSEERLKKE 417 Query: 397 KNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV-SENMSDDEVAMLIF 455 K G + LS + G ++ IE+ DDG G+N +++ AKA +G+ SE MSD+E+ LI Sbjct: 418 KKETGLITLSGYYTGTDVIIEIKDDGRGINADKVRAKAIERGIIEQSEVMSDEELYHLIC 477 Query: 456 APGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGM 515 PGFSTA+++T++SGRGVGMDVVK+NI + G++ I S GT I LPLTL+I+DG+ Sbjct: 478 YPGFSTADELTELSGRGVGMDVVKKNIDSLKGNLHISSTPQKGTHFTIRLPLTLSIIDGL 537 Query: 516 SVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKT 575 V V + +I+P+ ++ + + + +++V G+ + ++ L K F + Sbjct: 538 LVDVENVKYIVPMFSIDQIYRLPTKSIEREDYFSFLVQVDGQQISVLNLRKEFQFNQQEN 597 Query: 576 -EATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALI 634 + + V++L + + + VD++ G+ Q ++K + ++ I ++ILGDGS+AL+ Sbjct: 598 IDIKEMDVIMLSNNEKSQGIAVDKIYGEIQAIIKPIGKHFSTQKYILGSSILGDGSLALV 657 Query: 635 VDVSALQAINRE 646 +D L Sbjct: 658 LDTHRLIHQFHS 669 >UniRef50_B1XW80 CheA signal transduction histidine kinase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XW80_LEPCP Length = 756 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 212/726 (29%), Positives = 341/726 (46%), Gaps = 78/726 (10%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++D TF +EA+E +EQ LL L+ + D + L+A+FR AH++KG AG FG + + Sbjct: 13 LADALPTFINEANEQTESLEQLLLQLEEQPGDRDLLDALFRCAHTVKGSAGMFGLDKVVD 72 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD---YICQ 121 TH +E LL R G + L+ + L L+ D ++ + + + + + Sbjct: 73 FTHHVETLLSRIRDGLIDLDLGVSTLLLQCNDQIRHLIGSAADAGADTPEQVERRADLVM 132 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSR------------------SQSPRRII 163 L L + +A + V + P +I Sbjct: 133 QLHALLGASDRRAAAAGPADASVDPPADAPDDDAPMLRWHVSVQFGPETFRNGMDPLAVI 192 Query: 164 LSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITF 223 G V+ + + + L + L+ + D F D Sbjct: 193 AYLETLGSVEAIGCDQAAIPALDVIDAEQCHLAFEVCIDTRATREELEGAFSFVRDDCVL 252 Query: 224 ETVE-VSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN-----L 277 ++ +++ ++ G + ++ + + ++L L Sbjct: 253 HLIDLPEGPGRLARLIEALPDRPRLGDILMSIGAVTHAQLQACLNQQAQNRLATPDEVPL 312 Query: 278 VGELVITQSML------------------------------------------------A 289 +GEL+ T++ + A Sbjct: 313 LGELLQTKAGVHGEVVAAALDKQRKQRDPAPGDENRYIRVHADRLDAVINLLGELVIAGA 372 Query: 290 QRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGK 349 + +L + + R +++ + +RM+P+ FSR+ R+VRD A +LGK Sbjct: 373 GAAMLARQTRQRNLHEANQNVVRLIEEIRNGTLQLRMVPIGETFSRFRRVVRDTASQLGK 432 Query: 350 QVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEH 409 +V L +VG TELDKS++ERI DPL HLVRN LDHG+E P +R AAGK +VG L+LSA H Sbjct: 433 EVTLEIVGGETELDKSMVERIADPLMHLVRNGLDHGLETPAERQAAGKPAVGRLVLSARH 492 Query: 410 QGGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDV 468 + G++ I + DDG G++RER+L +A +GL D E+ LIF PGFSTAEQVT + Sbjct: 493 ESGSVLIRIDDDGRGIHRERVLQRAWDRGLLERGTRPPDAEILKLIFEPGFSTAEQVTSL 552 Query: 469 SGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPL 528 SGRGVGMDVV+RNI+ + G V++ S +G GT I I LPLTLAI+DG V V FI PL Sbjct: 553 SGRGVGMDVVRRNIEALRGSVQLHSTEGLGTRIDIRLPLTLAIIDGFLVSVGASKFIFPL 612 Query: 529 NAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSG 588 + V+E ++ R G +E+RG+ LP+V L +++ E ++++ +G Sbjct: 613 DTVVEVIENRPTTTGFDRRGRGTVELRGQVLPVVSLRVFYDLESPPPERDN--IIVVNAG 670 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 + ++VD L+GQHQ V+K L ++ + G+S ++ILG+G VALI DV +L + + Sbjct: 671 EAPFGIVVDALLGQHQTVIKPLGRIFKMLRGLSGSSILGNGEVALIADVMSLSHLAAQPP 730 Query: 649 MANTAA 654 + A Sbjct: 731 RVHVPA 736 >UniRef50_C6P319 CheA signal transduction histidine kinase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P319_9PROT Length = 1739 Score = 507 bits (1307), Expect = e-142, Method: Composition-based stats. Identities = 179/653 (27%), Positives = 304/653 (46%), Gaps = 42/653 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F +EA EL + + L + + D + + R+ H++KG A G L E Sbjct: 1000 DEQLLPIFLEEAHELYPQIGRTLRAWREQPGDVQSGRNLQRSLHTLKGSARMAGAMRLGE 1059 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 TH +E+ +D+A +LN ++ N D + ++ +Q Q+P AA + Sbjct: 1060 LTHRVEDRVDKAIASG-ELNAELWNELDNYLDRIGNAIEQLQQPQQPQAAPEQPVVA--- 1115 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + + Q + ++ + L R+++ VD L E G ++ Sbjct: 1116 ---------SEVQQQHPEAARTAPVQALEVGAERAMQAALLRVRSDTVDRLVNEAGEVSV 1166 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + S + + + V + E + + Sbjct: 1167 ARSRAEMELSALK--------NSVLDLTDSVNRLRKQLREIEIQAEGQMQARISVSGESA 1218 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLI 304 +E ++ TR E T R E V + + L+ N + Sbjct: 1219 EKFDPLEFDRFTRFQEVT--RFMNESVHDVQTVQQALL---------------KNLAETE 1261 Query: 305 TSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDK 364 ++ RDLQ+ +M+IRM+P + R R+VR +LGK+ L L G+ ELD+ Sbjct: 1262 AALTAQAHLNRDLQQGLMAIRMVPFASISERLYRIVRQTGKELGKRANLELSGTEVELDR 1321 Query: 365 SLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAG 424 S++E++ P HL+RN++ HG+E PE+R AGK ++G + LS + + E +DDGAG Sbjct: 1322 SVLEKMTAPFEHLLRNAVAHGLETPEQRELAGKEAIGEIRLSLRQESNEVVFEFSDDGAG 1381 Query: 425 LNRERILAKAASQGLT-VSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQ 483 L+ R+ KA G+ E +SD+ LIF PG STA++VT++SGRGVG+DVV+ I Sbjct: 1382 LDLARVRQKAVETGVVHEGEEISDESAMQLIFTPGLSTAQEVTEISGRGVGLDVVRSEIT 1441 Query: 484 KMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLH 543 +GG +++ S+ G G I LPLTLA+ + VR + + LP + Q + A L Sbjct: 1442 ALGGRIDVASELGHGLRFTIHLPLTLAVTKTLLVRAGSQTYALPSTMIENVQQLKPAALD 1501 Query: 544 PLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQ 602 + + V + +G P+ L ++ A+ E V++L++G +R AL VD+L+G Sbjct: 1502 AVYSQQYV-DWQGSRYPLYSLARMLGDDEAEIENQPHNPVLLLRAGDKRVALHVDELLGN 1560 Query: 603 HQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQ-AINREQRMANTAA 654 +VVVKN+ ++PGI+ AT+ +G+V LI++ A I +++A AA Sbjct: 1561 QEVVVKNIGPQLARLPGIAGATVSANGTVILILNPIAFTQRIVVTRKIAKAAA 1613 Score = 75.7 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 97/327 (29%), Gaps = 15/327 (4%) Query: 14 DEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLL 73 +EA + + + L VL + RAAH++ G T G + E + +E L Sbjct: 757 EEAAGHVHALHEQLAVLHETESHIVTYD-FMRAAHTLAGVNRTMGLVQIAELAYALELWL 815 Query: 74 DEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGE 133 +E +N I L + ++E + ++ + I A+ A Sbjct: 816 EERIDKPYVVNEQQIALIDQVVQRLEEMCAVVRDQRQEPQPQPELIALLQEDKAIVATEA 875 Query: 134 TPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGAD 193 P + + + P +I L +D E Sbjct: 876 APPEL----EAVPALEFEAPLALPEPEEVIEPVLPEAALDFAIPEEAVPEAAEAPQTLEL 931 Query: 194 SLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVERE 253 + A P + + I+ + + P+ + + E+ P + + Sbjct: 932 PVPAAEPESVTAEGISETGLEIPSIPGLPEVAEARGPEAAQESPVATTDEEEPVLPLPQR 991 Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 + +E V + + + EL + E + S LQR+ Sbjct: 992 EREVHDE-----VDEQLLPIFLEEAHELYPQIGRTLRAWREQPGD-----VQSGRNLQRS 1041 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLV 340 L+ S M + + R V Sbjct: 1042 LHTLKGSARMAGAMRLGELTHRVEDRV 1068 Score = 58.3 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 89/265 (33%), Gaps = 9/265 (3%) Query: 16 ADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDE 75 A E++ + +L + + E L + R H++KG G + L E +E +++ Sbjct: 594 AREVMETLRSNLEISRLHMDSREPLVTMRRGFHTLKGSGRMVGLTELGEVAWAVERAMNK 653 Query: 76 ARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAKGETP 135 + ++++ + + + Q +D Y+ L +E E P Sbjct: 654 WLQENKPATPVLLDMIGDAEVLFQHWVDMLSSGSTNATIDTSYLL--LVADCIENGKEVP 711 Query: 136 SAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSL 195 T + Q+ +Q P + E+ + T+ G Sbjct: 712 QTRTEPA------MQEAVIETQQPEEAESEEERPVEIGSVSLSPALFNIATEEAAGHVHA 765 Query: 196 SAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKT 255 + E + + ++ + T V + + L A E R+++ Sbjct: 766 LHEQLAVLHETE-SHIVTYDFMRAAHTLAGVNRTMGLVQIAELAYALELWLEERIDKPYV 824 Query: 256 TRSNESTSIRVAVEKVDQLINLVGE 280 + I V++++++ +V + Sbjct: 825 VNEQQIALIDQVVQRLEEMCAVVRD 849 >UniRef50_Q0VTJ1 Two-component hybrid chemotactic sensor and regulator, putative n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VTJ1_ALCBS Length = 2336 Score = 507 bits (1305), Expect = e-142, Method: Composition-based stats. Identities = 170/656 (25%), Positives = 291/656 (44%), Gaps = 38/656 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 + + F +E++EL + L + + + + RA H++KGGA G Sbjct: 1561 ADSDPEILNIFLEESEELSEIINACLTSWRDNPQSTDFTDDLKRALHTLKGGARLAGLKQ 1620 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD--YI 119 L + +H EN L R L D + +++ + + + Sbjct: 1621 LGDISHNFENYLLALERRRQTPAPSDFQPMLRWHDQINRGMESVAAAARANTPAAQGANT 1680 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEEL 179 L L P + + + Q + R+ A ++ L Sbjct: 1681 TDQLNTLLTAPPQPAPQQPQKDARRQRQAQAQPQE---------MVRVGADVLEALVNLA 1731 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 G + V+ + A + + + + + D T + + + Sbjct: 1732 GETSINRGRVEQGITEFA-FNVEEMGNTVQRLYEQLRRLDSETEAHIMSNYQKGVDL--- 1787 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVN 299 ++ + +++ +L + +L + S L + L N Sbjct: 1788 -----------------GEHDEDFDPLEMDQYSELHQIAKQLSESASDLLDLKNTLLDRN 1830 Query: 300 HGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSS 359 D T + Q R +LQE +M RM+P + R R+VR ++G++ K+V+ ++ Sbjct: 1831 -KDTETLLLQQARINTELQEKLMRTRMVPFSRLVPRLRRIVRQISGEVDKRVDFDVINPE 1889 Query: 360 TELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVT 419 ELD+SL+ER++ PL H++RN++DHGIE + R AAGKN G++ L +GG + I ++ Sbjct: 1890 GELDRSLMERVVAPLEHMLRNAVDHGIETGDARNAAGKNPTGHINLELGREGGEVVITLS 1949 Query: 420 DDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVV 478 DDG G++ + + KA QGL + + + E+ IF GFSTA VT +SGRGVGMDVV Sbjct: 1950 DDGKGIDTDAVREKAIEQGLIAEDAQLCEQEIQQFIFHAGFSTAAAVTQISGRGVGMDVV 2009 Query: 479 KRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPR 538 I++MGG V I S +G GT I LP TLA+ + V+ AD+ + +PLN + ++ Sbjct: 2010 ASEIKQMGGSVAIDSHKGQGTRFIIRLPFTLAMNRALMVKAADDSYAIPLNQIEGIVRIS 2069 Query: 539 EADLHPL-AGGERVLEVRGEYLPIVELWKVFN---VAGAKTEATQGIVVILQSGGRRYAL 594 +L V G+ + L + V + + T V++++S A+ Sbjct: 2070 PFELQHYFEEENPVYTYVGQDYQLQYLGHFVHGNRVPHLENQTTPMPVLLIRSTEHTVAI 2129 Query: 595 LVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMA 650 +VD+L+G +VVVK + + GIS ATILGDGSV +I+D+ +L Q A Sbjct: 2130 VVDELVGSREVVVKAVGPQLATIAGISGATILGDGSVVIILDIHSLIRAAHVQTTA 2185 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 2/156 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EADE+L L + + + +L ++ R H++KGGA L + Sbjct: 1390 DPELVEIFLEEADEILESAGNSLELWISQQDNLIELQSLQRDLHTLKGGARMAEVPELGD 1449 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E L + + ++ + + +L D + E ++A + +Q + A+ Sbjct: 1450 LGHELETLYEGLAQSQLAIEPSLFDLLHRCHDQLAEMVEALRTNQPLPNGGV--LIAAIH 1507 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPR 160 A++ + V S P + P Sbjct: 1508 DYMANPVTFALPALSAIQTVHPSPPSADVVEQNPPA 1543 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 76/210 (36%), Gaps = 5/210 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + F +EA+E+L L + D ++++ R H++KGGA G + +++ Sbjct: 1243 DPELMALFLEEAEEILESASHSLDQWEA--GDNSNISSLQRDLHTLKGGARMAGVAPVED 1300 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +ENL + G+++ + + +L + D + ++ + + P A + Sbjct: 1301 LAHELENLYESYNAGQLESHAALFHLLHQCHDSLAMMIENLQANTPP--ADHAEHSEQKN 1358 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 LA T + +T A + + R I L ++ L + Sbjct: 1359 SLATPQPNTTGAPITIEDAPASIDVPPQPKRDPELVEIFLEEADEI-LESAGNSLELWIS 1417 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCF 214 D + SL L + V Sbjct: 1418 QQDNLIELQSLQRDLHTLKGGARMAEVPEL 1447 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 92/270 (34%), Gaps = 1/270 (0%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +E E+L ++Q+ D E L RA H++KG G S + E +EN Sbjct: 661 FQEEVGEVLDALDQYFPRWVANTSDEESLVEFRRAFHTLKGSGRMVGASTVGELGWSVEN 720 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALEAK 131 +L+ ++ + +I L E ++ + +DA+ ++ D + A LA ++ Sbjct: 721 MLNRVIDRTIEPSAVLIALVQEVRNRVPALVDAF-TLRQTDPFDVQPLIDAADTLANGSQ 779 Query: 132 GETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKG 191 + + + D L + + ++ Sbjct: 780 IRQVPTLAGAASNTTHSNDNAGILDDIVMDTTADATLDSPADAEYITLDNASENENLELT 839 Query: 192 ADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVE 251 +LS + A++D++ EA + S V L A+ PTG E Sbjct: 840 EPALSDSANCEPADNDLSTEDLAAFEAAASEDALNPWETESSRDDVYLLPADNDPTGIDE 899 Query: 252 REKTTRSNESTSIRVAVEKVDQLINLVGEL 281 + + + + I + ++ Sbjct: 900 GISLDLPEQEPADDADSDTSNASIESLSDI 929 Score = 67.2 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 99/360 (27%), Gaps = 33/360 (9%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + F EA LA + Q L + + + + RA H++ G A + E Sbjct: 950 LLEIFSSEARRSLALIAQWLANNDTDLSEHPVDDGVHRALHTLMGSARMAEIEAVAEVAE 1009 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 E L + + N I L +T D++ LD D + +L Q Sbjct: 1010 PAEKLTRDLISSNRRANQQQITLLAKTHDLILASLDKITSRPPGHLPGADELVHSLNQQR 1069 Query: 128 LEAKGETPSAVTR----------LSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 + + + + + ++ SEP Q L L+ L Sbjct: 1070 DQLQDSSSNDPDPHILSIFLSEGMDLIVDSEPLLSQWAQHPEHTDELVHLRDALERLANS 1129 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 + A + + E + ++ T Sbjct: 1130 AATSDLNEIHDLAAALTGCYSAVQSAHLAYSERLFTLASEGQEALMNMMDCLAAGQTVHA 1189 Query: 238 LKLAAEQAPTGRVEREK--------------------TTRSNESTSIRVAVEKVDQLINL 277 + E + + + S R +L+ L Sbjct: 1190 KQELVEALRKLTGGDDPNGSLADSSSDITLGSTVVVTQRAEHTTDSHRYEAHMDPELMAL 1249 Query: 278 VGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYP 337 L + +L S LD GD +++ LQR+ L+ + P+E + Sbjct: 1250 F--LEEAEEILESASHSLDQWEAGD-NSNISSLQRDLHTLKGGARMAGVAPVEDLAHELE 1306 Score = 46.0 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 93/336 (27%), Gaps = 13/336 (3%) Query: 1 MSMDISDFYQTFFD------EADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGA 54 M+ D+ + E E L +Q L + D ++ H + G Sbjct: 1 MTGDVMSDRHDYLALDWVRGEIQETLNQAQQTLESFENNPNDTTRMRFCQTHLHQVYGTL 60 Query: 55 GTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAA 114 F ME L G + D + + LD ++ Sbjct: 61 QMVEFYGAALFAEEMEKLAQALLNGSVSNVADSQETLMRAILQLPPYLDRVASNRRDLPV 120 Query: 115 SFDYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILS---RLKAGE 171 + LR E+ + A + Q + P L+ R Sbjct: 121 VLLPLLNDLRAARGESLLSETALFKPDLSEATGQGQIRDDKLNDPHFTQLAKKIRQMFQT 180 Query: 172 VDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPK 231 L ++ + + + GD + ++ ++E + S K Sbjct: 181 ALLGILRNDNIGKNLGYMAKVFTKLEQVTGDAPRAPLWSISNALVEGLSEDAIILGSSVK 240 Query: 232 ISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQR 291 + V + E A G + ++ ++ V K D + + V + L + Sbjct: 241 LMLGHVDRNLRELAVDGAASLNRPAPTDLIKNLLYYVAKADVDSPRIRD-VQARFRLDEA 299 Query: 292 SSELDPVNHGDLITS---MGQLQRNARDLQESVMSI 324 D VN + + + L E + ++ Sbjct: 300 LPSDDLVNTERQRMTGPDAQAMSSVVQALSEELTTV 335 >UniRef50_B3QWP5 CheA signal transduction histidine kinase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QWP5_CHLT3 Length = 2433 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 174/652 (26%), Positives = 314/652 (48%), Gaps = 16/652 (2%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 ++ Q F +EA E + + LL L A + +N + R AH++KG A + Sbjct: 1626 NEIQQVFLEEASEFIDKLNVDLLDLDKAAGTIQPDLVNRVMREAHTLKGSAAMVQLHNIS 1685 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 E H ME+ L R + + ++++ ++ D++ E ++ +K++ ++++ + L Sbjct: 1686 ELAHKMEDSLQFVRDNNISIPRPLVDVLFQSVDVINEMINHFKKTGTDNSSNQPELVALL 1745 Query: 124 RQL--ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 + LE KG+ ++ +EP + S++ + + + + V + L + Sbjct: 1746 QSYFQQLEEKGDIVEVGKSQQLIHAAEPNEALSKASATPKAAPTLVAEQTVRIDITALNN 1805 Query: 182 LTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLA 241 L L+ + A + I I L QI+ + K + K Sbjct: 1806 LVNLSAELVIARNRLNNELSSIYG-IINQFLKERNALGQISKKITVSIQKGAKGKAAKEE 1864 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 + + S T V E + + +L I + D Sbjct: 1865 EIDEDAQDLIQAIPVASAAVTFSDVLKEFSESEFDRFSDLDIISRDVKSSILNFDDSIKE 1924 Query: 302 D------LITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 + ++ ++ A DL ++ +RM+P++ +F R+ R VRD+A K++ L Sbjct: 1925 LRDLTTFINQNIVKVSNIANDLNRVIVGMRMVPVKQMFIRFSRSVRDIAKNEEKKINLLT 1984 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 G T+LDK ++E +I+P+ H+VRN++ HG+E PE+R GKN G LIL A +G + Sbjct: 1985 EGDDTKLDKMVMEDVIEPMMHIVRNAIGHGLEKPEERRKNGKNETGQLILRAYQKGNRVI 2044 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 +EV DDG G++ E++ KA +G+ ++ + LIF PGFSTAE+VT++ GRG Sbjct: 2045 LEVEDDGKGISVEKVKRKAIEKGIITESEATTITPEATTELIFRPGFSTAEKVTELHGRG 2104 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VG+DVV I+ + G V I++K+G GT I LPLTLAI D + + A + +PL+ V Sbjct: 2105 VGLDVVYTTIRNLKGFVNIETKEGQGTKFIISLPLTLAISDALLIEAAGNTYAIPLDMVF 2164 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTE-ATQGIVVILQSGGRR 591 E++ + + + + +R E + + L + N + VV+++ R+ Sbjct: 2165 ETVNIPDYAIEH-EDNKMFVNIRNERIELAYLNALLNYNSDILKFKAMLPVVVIELEDRK 2223 Query: 592 YALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 A+ +++LI + ++VVK L S+ R V G+ ATI+GDG V +I+D++ L Sbjct: 2224 VAVGIEKLINKEEIVVKTLGSHLRNVRGVIGATIMGDGQVVIILDMNYLLRA 2275 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 55/371 (14%), Positives = 117/371 (31%), Gaps = 58/371 (15%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQP--EAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 + + Q F +EA+E L ++ LL L E ++ + R+AH+IKG A Sbjct: 1479 FEPDEIQQAFLEEAEEYLENLNIDLLQLDKLFGTEQPEIIHRVLRSAHTIKGSAAMVQLR 1538 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E H ME+ L R +++ +++ ++ D + E + +K++ E + Sbjct: 1539 NISELAHKMEDSLQIVRDKNLKVPRLLVDTLFQSVDAITEMTNHFKKTGEDSNEHTKELI 1598 Query: 121 QALRQLAL--EAKGETPSAVTRLSVVAKSEPQ---DEQSRSQSPRRIILSRLKAGEVDLL 175 L + GE + + Q +E S + L L + Sbjct: 1599 DTLAEYEKQLADTGEIKAIAKKGLFKPNEIQQVFLEEASEFIDKLNVDLLDLDKAAGTIQ 1658 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFET---------- 225 + + + +KG+ ++ + + L FV + + Sbjct: 1659 PDLVNRVMREAHTLKGSAAMVQLHNISELAHKMEDSLQFVRDNNISIPRPLVDVLFQSVD 1718 Query: 226 ---------------------------------------VEVSPKISTPPVLKLAAEQAP 246 + K E Sbjct: 1719 VINEMINHFKKTGTDNSSNQPELVALLQSYFQQLEEKGDIVEVGKSQQLIHAAEPNEALS 1778 Query: 247 TGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT- 305 + ++R+ + ++ L+NL ELVI ++ L S + + + L Sbjct: 1779 KASATPKAAPTLVAEQTVRIDITALNNLVNLSAELVIARNRLNNELSSIYGIINQFLKER 1838 Query: 306 -SMGQLQRNAR 315 ++GQ+ + Sbjct: 1839 NALGQISKKIT 1849 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 47/319 (14%), Positives = 119/319 (37%), Gaps = 6/319 (1%) Query: 3 MDISDFYQTFFDEADELLADMEQHLLVLQPEAP--DAEQLNAIFRAAHSIKGGAGTFGFS 60 + + F +EA E L + + LL L + + +N + R++H++KG A Sbjct: 1335 FEPDEIQAIFLEEAYEYLEKLNEDLLELDKTSGTLQPDLINGVLRSSHTLKGSAAMVQLH 1394 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + E H ME+ L R ++ ++++L D + + ++++ + D + I Sbjct: 1395 HISELGHKMEDALQVVRDKNLKTPPELVDLLFHAVDAITAMIKHFRETGKDDNDKCEAII 1454 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 + L + + ET +T S ++ EP + Q L L + L + Sbjct: 1455 ETL--VDYTQQLETKGEITSASSKSRFEPDEIQQAFLEEAEEYLENLNIDLLQLDKLFGT 1512 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKL 240 + V + + +I+ + + ++ QI + P++ + + Sbjct: 1513 EQPEIIHRVLRSAHTIKGSAAMVQLRNISELAHKMEDSLQIVRDKNLKVPRLLVDTLFQS 1572 Query: 241 AAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNH 300 A T K T + + + ++ + + + + +++ + + + + Sbjct: 1573 V--DAITEMTNHFKKTGEDSNEHTKELIDTLAEYEKQLADTGEIKAIAKKGLFKPNEIQQ 1630 Query: 301 GDLITSMGQLQRNARDLQE 319 L + + + DL + Sbjct: 1631 VFLEEASEFIDKLNVDLLD 1649 >UniRef50_Q6MHS1 Chemotaxis protein n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHS1_BDEBA Length = 671 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 200/668 (29%), Positives = 339/668 (50%), Gaps = 32/668 (4%) Query: 11 TFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70 F +E+ +L E++++ L+ A+ L IFR AHS+KGGA G + L + H+ME Sbjct: 2 DFLNESAFMLEQYEEYMMRLENSEDPAKDLTDIFRVAHSVKGGAAAVGLADLCKFAHVME 61 Query: 71 NLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFD---YICQALRQLA 127 +LLD R +N+ +I+L L++ D ++ ++ A +Q Q + QL+ Sbjct: 62 DLLDLLRSRPELVNSTVISLLLQSGDELKNRVAALQQQQGGPWDPSALTAELIAITEQLS 121 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 +A + P D +++ + + DLL E L ++ Sbjct: 122 GKASKHAHAPAPSADEPKVEAPDDFFAQAPAAEASAGAEDDLINHDLLAELLAQMSPEDQ 181 Query: 188 VVKGADSLSAILPGDIAEDDITAVL------CFVIEADQITFETVEVSPKISTPPVLKLA 241 A + + V++ + E + K + K A Sbjct: 182 AEFHAKEAAEAALKTAIAEAAPVAEAEAVKTAPVLKVVETPVEASAPAAKAAPAAAAKPA 241 Query: 242 AEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHG 301 A A +G N +++I+V +VD +++ VGELV+ ++ L + VN Sbjct: 242 AAAAASGSGGGNNKNAKNATSAIKVDTGRVDSVLDAVGELVVLKNQLVHDETVRSGVNLR 301 Query: 302 DLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 L + QL + R+L E +SIRM P++ +F + R+VRD++ L K V+L L+G TE Sbjct: 302 -LEAIVDQLDKAVRELYEKTLSIRMTPLKSMFIKIQRIVRDVSLTLDKPVDLQLIGEETE 360 Query: 362 LDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDD 421 +++++ E + DPL HLVRNS+DHG+E E R GK + + +SA+ GGN+ I+++DD Sbjct: 361 VERTVFELLGDPLVHLVRNSMDHGVEKKELRQERGKPATAKVTVSAKQSGGNVIIDISDD 420 Query: 422 GAGLNRERILAKAASQGL----TVSENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDV 477 G G+NR+++L KA +G ++ D++V IF PGFSTA++++D+SGRGVG+DV Sbjct: 421 GGGINRDKVLGKAIEKGFVPAGVDPASIPDEQVFQYIFYPGFSTADKISDLSGRGVGLDV 480 Query: 478 VKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQP 537 VK N+ K+ G + I SK G GTT R+ +PL+ AI DG+ V + +ILP++++ E ++ Sbjct: 481 VKSNLDKINGKINIYSKAGQGTTFRLTIPLSTAITDGIIVALDGARYILPIHSIREIVRV 540 Query: 538 READLHPLAGGERVLEVRGEYLPIVELWKVFNV-----------------AGAKTEATQG 580 D ++G +V +RG LP++++ K + Sbjct: 541 LPKDYTNISGAGKVASIRGHLLPVIDVSKTLGSINWSLNKKDQQLAQRRENSLSARREET 600 Query: 581 IVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSAL 640 ++VI++S + A VD ++GQ QVVVK + + + +P ++ A ILGDG LI++ AL Sbjct: 601 MLVIIESMTGQMAFPVDDVLGQAQVVVKPITTG-QDIPEVAGAAILGDGRTVLILEPGAL 659 Query: 641 QAINREQR 648 R Sbjct: 660 VNNVANGR 667 >UniRef50_C8WD70 CheA signal transduction histidine kinase n=3 Tax=Zymomonas mobilis RepID=C8WD70_ZYMMN Length = 776 Score = 504 bits (1299), Expect = e-141, Method: Composition-based stats. Identities = 206/533 (38%), Positives = 319/533 (59%), Gaps = 8/533 (1%) Query: 117 DYICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRR---IILSRLKAGEVD 173 + + ++L + V ++ ++E RS + ++ G+ + Sbjct: 236 EIVATDYQELPTLEDINPEISYLGWWVRLPADVEEEDIRSVFEFVGDISEVVLIRKGDKN 295 Query: 174 LLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKIS 233 L L V ++ + D T A + + Sbjct: 296 QKMPPLPEKAALKPVTDQSEKEALAKIEAPKGDKETTKAAEKPAAKTPPASKPTAKVEAA 355 Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 P A + ++ + +IRV ++K+D+L+NLVGELVITQ+MLAQR + Sbjct: 356 KKPAAPAPAAAPTKAPPQPPRSAAPAMAQTIRVDLDKLDRLVNLVGELVITQAMLAQRLT 415 Query: 294 ELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVEL 353 + +L L R+LQ+S MSIR PM+ VFSR PR++R+L G+ GK+V L Sbjct: 416 DQGLSGSSELTD----LDHLTRELQDSAMSIRAQPMKTVFSRVPRIIRELEGETGKKVRL 471 Query: 354 TLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGN 413 ++G TE+DK+++ERI +PLTHL+RN++DHG+E PE+R+AAGK G + L+AEH+ G Sbjct: 472 DVIGEMTEVDKTVVERIGEPLTHLIRNAVDHGLETPEERVAAGKPQEGVVTLAAEHRSGR 531 Query: 414 ICIEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRG 472 I I ++DDG G+NR RIL KA +G+ + +SDD++ LIFAPGFSTA +VT+VSGRG Sbjct: 532 IIIRISDDGKGMNRARILEKAIEKGIVSPDQTLSDDDIDNLIFAPGFSTAAKVTNVSGRG 591 Query: 473 VGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVM 532 VGMDVV++N+Q +GG + I S+ G G+T + LPLTLA+LDGM V+V D+ F++PL ++ Sbjct: 592 VGMDVVRKNVQALGGRISINSRPGFGSTFTLSLPLTLAVLDGMIVQVGDQTFVIPLGHIV 651 Query: 533 ESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRY 592 ESLQP E ++ + E++L VRG Y+PI + + +V A+ + + ++++++S G + Sbjct: 652 ESLQPNEGEISGIGTTEKLLNVRGAYVPIQSIGRELSVENAELDPFKSVLIVVESDGGQA 711 Query: 593 ALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 L+VDQ++ Q QVVVK+LE+NY+ + G++ ATILGDG VALI+DV +L A R Sbjct: 712 VLMVDQILDQRQVVVKSLEANYQAIAGLAGATILGDGRVALILDVDSLVARWR 764 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 63/289 (21%), Positives = 97/289 (33%), Gaps = 10/289 (3%) Query: 1 MSMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFS 60 MS D + FF E +E LA+ME + + D E +N IFRA HSIKGGAG FGF Sbjct: 1 MSFD--EIQNIFFQECEEGLANMEACFSLCRDGVQDDETINTIFRAVHSIKGGAGAFGFE 58 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 L+ H E LLD+ R G + L D+++ + D++ + + A S E D I Sbjct: 59 QLRSFAHHYETLLDKLRNGVLTLTPDLLSTLMAAFDMLSDHVAA--ASGERDMPDDSGIM 116 Query: 121 QALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELG 180 L E GE PS+ EP+ P L Sbjct: 117 DRLTAAMEEGGGEPPSSAAEAPAETPPEPEAPAEEDSVPDIDGDFDFDDLLTSLDAPAET 176 Query: 181 HLTTLTDVVKGADSLSAILPGDIAEDDITAVL-----CFVIEADQITFETVEVSPKISTP 235 + + + + +L ++ + + Sbjct: 177 EDKKEPEAATPVEEEKIEESDEEDNAPKSWLLWFKPDRHALDNGSDPLLLLRELDSLGAE 236 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTS-IRVAVEKVDQLINLVGELVI 283 V E + E + V E + + VG++ Sbjct: 237 IVATDYQELPTLEDINPEISYLGWWVRLPADVEEEDIRSVFEFVGDISE 285 >UniRef50_Q9UYF4 CheA chemotaxis histidine kinase n=2 Tax=Pyrococcus RepID=Q9UYF4_PYRAB Length = 772 Score = 504 bits (1298), Expect = e-141, Method: Composition-based stats. Identities = 154/382 (40%), Positives = 248/382 (64%), Gaps = 9/382 (2%) Query: 254 KTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRN 313 +T R S I++ V +D+L+NLVGELVIT+ L Q L +L ++ L R Sbjct: 382 ETPRVKISRIIKIDVGHLDKLMNLVGELVITKGRLEQIGERL---GDRELFEALSTLSRL 438 Query: 314 ARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDP 373 +LQ+ +M +R+ P+ VF+++PR+VRDLA K+GK+VE + G+ E+D++++E++ D Sbjct: 439 LTELQDEIMEMRLTPIAEVFNKFPRMVRDLARKMGKEVEFVMEGADIEVDRTILEKLGDA 498 Query: 374 LTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAK 433 L HL+RN++DHGIE PE+R+ GK VG + L A+ + ++ I V DDG G++ E++ K Sbjct: 499 LVHLLRNAVDHGIEPPEERVKLGKPRVGRVELIAKREKNHVVIIVRDDGRGIDPEKVKKK 558 Query: 434 AASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVE 490 A +GL E +SD+E LIF PGFSTAE+VTDVSGRGVGMDVVK ++ M G + Sbjct: 559 AIERGLITPEEAASLSDEEAINLIFLPGFSTAEKVTDVSGRGVGMDVVKEVVKSMNGSIS 618 Query: 491 IQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGER 550 +Q++ G GTT + LP+++AI+ + +RV DE + +P+N ++E+++ + L + GG+ Sbjct: 619 VQTEVGKGTTFILKLPISMAIIQALLIRVMDETYAIPINNILETIEVDPSILKTI-GGKP 677 Query: 551 VLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNL 610 V+ +RGE +P+V L ++F + + + +I+ G ++ A+ VD+L+ + +V+K+L Sbjct: 678 VIVLRGEIIPVVMLHELFGLPTPQ--VERFPAIIVDHGAQKVAIGVDELLHKRDIVIKSL 735 Query: 611 ESNYRKVPGISAATILGDGSVA 632 V G + ATILGDGSV Sbjct: 736 GKFLSNVRGFAGATILGDGSVV 757 Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 7/132 (5%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQP-------EAPDAEQLNAIFRAAHSIKGGAGT 56 D+S + F +A + + + +L L+ E AE +N IFR AH++KG A T Sbjct: 6 DMSQYLDEFLADARDRIDSLSNAILTLEKIVKEGGSEEEKAELINQIFRDAHTLKGTAAT 65 Query: 57 FGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASF 116 GF L ET H MENL D R +++L ++++L L+ D ++ ++ ++S Sbjct: 66 MGFMKLSETAHKMENLFDAIRNSQIELTPEVVDLVLDFLDAIEAMVNNIEESGSEGDIDV 125 Query: 117 DYICQALRQLAL 128 + + + Sbjct: 126 SDLFRRADEFLQ 137 >UniRef50_A4G8M3 Putative chemotaxis protein histidine kinase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G8M3_HERAR Length = 1969 Score = 504 bits (1297), Expect = e-141, Method: Composition-based stats. Identities = 177/654 (27%), Positives = 289/654 (44%), Gaps = 38/654 (5%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +DI F +E ++L M Q L Q DA ++ R H++KG A G + Sbjct: 1180 EIDID-LLPVFIEEGSDMLPQMGQALRAWQQNLGDAALPQSVLRILHTVKGSARMAGAML 1238 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 L + H ME ++ + + L D + + + + Sbjct: 1239 LGQHMHEMETRIENI-THAGYPSAAAVEDLLARHDHGLQLFEQLQNPDAIRPQASAAAVT 1297 Query: 122 ALRQLALEAKGETPSAVTRLSV------VAKSEPQDEQSRSQSPRRIILSRLKAGEVDLL 175 A E P + + V +E + + L R++A +D L Sbjct: 1298 DEENTPAPAAAELPVIQSLMPVTDNRTTPIAAEAAAASRTPATATPVPLVRVRADILDRL 1357 Query: 176 EEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTP 235 + G ++ ++ G+++E+ I Q + S Sbjct: 1358 VNQAGEVSISRSKLETEVGTLRASMGELSENVIRLREQLREIEMQAESQITSHMGVSS-- 1415 Query: 236 PVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSEL 295 +E ++ TR E T R+ E V+ VG + S +S Sbjct: 1416 --------DREFDPLEFDRFTRLQELT--RMMAESVND----VGSVQQNLSRTIDSAS-- 1459 Query: 296 DPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTL 355 T + R RDLQ+ +M +RM+ + R R+ R A ++ K+V L + Sbjct: 1460 ---------TDLTNQARLTRDLQQDLMRVRMVQFASISERLYRVTRQAAKEMDKRVNLDI 1510 Query: 356 VGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNIC 415 GS+ E+D+S++E++ P HL+RN++ HGIE EKR AAGK+ G L + +G + Sbjct: 1511 RGSAVEVDRSVLEKMAGPFEHLLRNAIVHGIESREKRRAAGKSETGELRIEIRQEGNEVV 1570 Query: 416 IEVTDDGAGLNRERILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVG 474 I +DDG GLN I +KA GL +E+ +SD EV LIF PGFSTAE++T+++GRG+G Sbjct: 1571 IHFSDDGQGLNLNSIRSKALQNGLVKAEDALSDAEVTDLIFHPGFSTAEEITELAGRGIG 1630 Query: 475 MDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMES 534 MDVV+ +GG V I S+ G G I LPLTLA+ + + + + +P V + Sbjct: 1631 MDVVRSEAASLGGRVAIASEPGKGAYFTIHLPLTLAVTQVVILSTGGKTYAIPSVLVEQV 1690 Query: 535 LQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYA 593 Q + L A E + + + +P+ L + A Q ++IL+SG R A Sbjct: 1691 QQLKNGPLAT-AYNEGAVMWQSQRVPMHYLSALLGDTDAAPVTQQYSPLMILKSGSDRVA 1749 Query: 594 LLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQ 647 L VD+++G +VVVKN+ ++ GI+ AT+LG G + LI++ L + Sbjct: 1750 LHVDEILGNREVVVKNIGPQLSRMIGIAGATVLGSGEIVLILNPVPLAQRVAHE 1803 Score = 84.9 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 110/358 (30%), Gaps = 11/358 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ + F EA E+L ++Q + + + E L + R+ H++KG G L E Sbjct: 717 DAELLEIFLSEAVEVLDCVKQTIPDSRNAPHNQEFLTTLRRSFHTLKGSGRMVGLIALGE 776 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E +L+ + ++ L ++ + + D + +AL Sbjct: 777 AAWSVEQVLNLRLSETRGGDPELYALLENAVQVLDAWVSDLQTQGRSDRS-----GRALI 831 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 A + ET + + DE + + + + Sbjct: 832 NAAEGVRNETGFHYDASDELLSASSFDESAAAFETTVVEEPVADGAADHAADFGSQEFPQ 891 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCF-VIEADQITFETVEVSPKISTPPVLKLAAE 243 T+ + S + + F V E E + +L Sbjct: 892 ATEPEELQLSDEELAQFHQFNASVEDTPAFAVAEPIFPVGELDHLQIDDMPLNAAQLPIA 951 Query: 244 QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDL 303 + +SN++ +E L N+ L T ++ S + H Sbjct: 952 EVLDFPGHPPAVAKSNDNVKYIGDLEISLPLHNIY--LAETDELVRLLSQDFAEWRHEPD 1009 Query: 304 ITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTE 361 Q A L S ++ P++ + +++ LA K V+L + T Sbjct: 1010 RHVNIQAVHAAHSLAGSSATVGFRPLQQIAYALEAVLQYLAR---KPVKLLISEYDTL 1064 Score = 73.7 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 74/239 (30%), Gaps = 3/239 (1%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 + + E DEL+ + Q + E + A+ AAHS+ G + T GF LQ+ + Sbjct: 982 LHNIYLAETDELVRLLSQDFAEWRHEPDRHVNIQAVH-AAHSLAGSSATVGFRPLQQIAY 1040 Query: 68 LMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLA 127 +E +L R ++L + + ++ L + + P+A Sbjct: 1041 ALEAVLQYLARKPVKLLISEYDTLEHGVERIRFMLQMFALGEMPEAEPEQVEILERMPGD 1100 Query: 128 LEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTD 187 E + P V + P+ + ++ + + Sbjct: 1101 FEFRAARPVQVVAEAPAETEVPELAADVLPAADNVVAVSAAFETEPVHLTMGTEAAPFEE 1160 Query: 188 VV--KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 V K D LS E DI + F+ E + + + + Sbjct: 1161 PVYPKDHDELSDPALTIKDEIDIDLLPVFIEEGSDMLPQMGQALRAWQQNLGDAALPQS 1219 >UniRef50_C1SNF5 Chemotaxis protein histidine kinase-like protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SNF5_9BACT Length = 693 Score = 503 bits (1296), Expect = e-141, Method: Composition-based stats. Identities = 168/424 (39%), Positives = 267/424 (62%), Gaps = 11/424 (2%) Query: 234 TPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSS 293 + A +AP VE+ K + +IRV V ++D L+NLVGELV++++ + Q S Sbjct: 133 ASDATRSGAPEAPQKNVEQVKKAAMSIEQTIRVDVSRLDSLMNLVGELVLSRNRIGQISG 192 Query: 294 ELD-----PVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 +L+ L+ + Q+ +LQ +VM RM+P+ VF+++PR+VRDL +G Sbjct: 193 DLEKKFEGEFLIEQLMETTSQIGLITTELQLAVMKTRMVPIGKVFNKFPRMVRDLCRDMG 252 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 K V+L + G TELDKS++E I DPL H++RNS+DHG+E+PE R GK G + LSA Sbjct: 253 KDVDLVISGEETELDKSVVEEIGDPLIHMIRNSVDHGVEVPEIRRKRGKPDKGIVNLSAY 312 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SENMSDDEVAMLIFAPGFSTAEQV 465 H+G +I +E+ DDGAG++ E + AKA +G+ ++N+ ++ L+F PGFSTA Q+ Sbjct: 313 HEGNHIVVEIKDDGAGMDAEVLKAKAVEKGVITIDEAKNLDNESAYGLVFKPGFSTAAQI 372 Query: 466 TDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFI 525 TDVSGRGVGMDVVK NI+K+ G + I+S+ G GT R+ LPLTLAI+ + V V+ E+F Sbjct: 373 TDVSGRGVGMDVVKTNIEKLNGIINIESELGHGTRFRLKLPLTLAIIQALLVDVSGEIFA 432 Query: 526 LPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQGIVVIL 585 +PL +V+E+++ +E ++H G E VL++R L ++ L +++ + + + VV++ Sbjct: 433 IPLVSVIETVRIKETEIHSFEGRE-VLKLRDSVLSLIRLDEIYELQESLND--DIYVVVV 489 Query: 586 QSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINR 645 +R +V++L+GQ ++V+K+L GI+ ATI+GDG V LI+DV+ + I Sbjct: 490 GLAEKRLGFVVNKLVGQEEIVIKSLGDYLSGNEGIAGATIMGDGRVRLIIDVAGVMEIAT 549 Query: 646 EQRM 649 + Sbjct: 550 KMPR 553 Score = 116 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 7/188 (3%) Query: 4 DISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQ 63 D+ D Q F E +E++ ++ L+ L+ D + LN IFR AH++KG + GF + Sbjct: 5 DMQDLVQDFILETEEIIEALDHDLVELETRKNDLDLLNKIFRGAHTMKGASSFLGFDKMS 64 Query: 64 ETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQAL 123 TH E +L++ R+ E+ + I+++ LE DI + + K + + Sbjct: 65 GVTHHAEEILNKLRKNEISVTPGIMDILLEFVDITKTIIVDIKNG-----TDVADVTDLI 119 Query: 124 RQLALEAKGETPSAVTRLSVVAKSEPQD--EQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 +L L +G+ P A A PQ EQ + + R+ +D L +G Sbjct: 120 NRLKLANEGKLPGASDATRSGAPEAPQKNVEQVKKAAMSIEQTIRVDVSRLDSLMNLVGE 179 Query: 182 LTTLTDVV 189 L + + Sbjct: 180 LVLSRNRI 187 >UniRef50_Q1MZ05 Sensor histidine kinase/response regulator n=1 Tax=Bermanella marisrubri RepID=Q1MZ05_9GAMM Length = 2141 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 188/659 (28%), Positives = 307/659 (46%), Gaps = 24/659 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EADELL +++ L Q + A+ R H++KGGA G + + Sbjct: 1332 DEEVIEIFLEEADELLEELDGLLQQWQQSPENLSTNEAVQRVLHTLKGGARIAGLVDIGD 1391 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQ-----SQEPDAASFDYI 119 H ME L + + + + N E D + +++ ++ + EP + Sbjct: 1392 MAHHMETELQKRLTEKRPGDEALFNSLHEQYDFIAGRIEHVQEWFNAGASEPLMVQVENA 1451 Query: 120 CQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEV------- 172 Q+ + E S V + +P E++ S++ I+ + + +V Sbjct: 1452 VQSNENTD-SDRAEVLSQPQTNVVPLRPQPDAEENTSKTTTAPIVPQAENNQVVAQSSPQ 1510 Query: 173 ----DLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEV 228 +E G +++K SL L E I+ D Sbjct: 1511 QPVSRTEQEAQGKRQGPQEMIKVPASLLDGLVNLAGETSISRGRLETQVTDFSYTLDEMD 1570 Query: 229 SPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSML 288 + L+ + + R + + +++ QL L LV + S L Sbjct: 1571 ATLDRLRDQLRRLDMETEAQVLFRREQQGPEYEDFDPLEMDRYSQLQQLSRSLVESASDL 1630 Query: 289 AQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLG 348 A S L D T + Q R +LQE +M RM+P + R R+VR ++ +LG Sbjct: 1631 ADLKSTLLD-KTRDAETLLLQQSRVNTELQEGLMKTRMVPFSRLVPRLRRIVRQISTELG 1689 Query: 349 KQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAE 408 KQVEL + + E+D+S++ER+I PL H++RN++DHG+E E+R AAGK+ GN+ LS Sbjct: 1690 KQVELHVSNAEGEMDRSVLERLISPLEHMLRNAVDHGLESTEQRKAAGKSETGNIYLSLS 1749 Query: 409 HQGGNICIEVTDDGAGLNRERILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTD 467 GG++ + + DDGAG+N + + KA +GL M D E+ I GFSTAEQVT Sbjct: 1750 RDGGDVVLRLADDGAGINVDAVRRKAIDRGLIDPSVKMPDQEIYQFILQAGFSTAEQVTQ 1809 Query: 468 VSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILP 527 +SGRGVGMDVV I+++GG V I S+Q GT I LP T+++ + +V D +F +P Sbjct: 1810 ISGRGVGMDVVNSEIKQVGGTVVINSQQNQGTEFVIRLPFTVSVNRALMAKVGDALFAIP 1869 Query: 528 LNAVMESLQPREADLHP-LAGGERVLEVRGEYLPIVELWKVF---NVAGAKTEATQGIVV 583 LN + ++ +L L + G + L ++ N+ + T VV Sbjct: 1870 LNNIEGIVRVSANNLRELLKQDKPTYHYAGREYQLEYLGRLLRDENMTRLPEDNTPMPVV 1929 Query: 584 ILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 +++ G A+ VD L+G ++VVK L + V G+S TILGDGSV +I+D+ + Sbjct: 1930 LVR-GSSPAAIQVDTLMGSREIVVKTLGPQFNSVVGVSGGTILGDGSVVIILDLPNMMR 1987 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 69/177 (38%), Gaps = 2/177 (1%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EA+ELL + + L + + + ++ + R H+ KGGA + + + Sbjct: 1159 DPELLEIFLEEAEELLDSISEALNDWKQDPLNLIKVAELQRDLHTFKGGARMAEINAIGD 1218 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E+L + G + + L D + + + A + +Q A + A++ Sbjct: 1219 LAHELEDLYEGLSLGRLTATPQLFELLQICHDRLADMVAALQDNQGMRPAP--ELITAIQ 1276 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGH 181 E PS + + + +D + + L ++ V+ L + Sbjct: 1277 LFIAGESLEVPSQANAIDETSTASDEDSLADPSASAVKPLQETQSVTVESLAIDADE 1333 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 38/246 (15%), Positives = 92/246 (37%), Gaps = 3/246 (1%) Query: 12 FFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMEN 71 F +EA+E+L + + + + D E L RA H++KG S + ET +EN Sbjct: 692 FLEEAEEVLETIHEFWPAYKGDTSDEEALITTRRAFHTLKGSGRMVSASDIGETAWAIEN 751 Query: 72 LLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLAL-EA 130 + + +QL+ ++ + + + ++A+K + + I + ++A E Sbjct: 752 MFNRLIDQTIQLSDELFTIVDYVIEQLPSLIEAFK-HRHVCPLDVEAIQEYANKIAKGEV 810 Query: 131 KGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL-TTLTDVV 189 GE A + +++ +S ++ +S + + ++ + L + +T + Sbjct: 811 AGEWHGAAKKFEQDSQNLATTVESSAKLESHDGISETETNDQNMDQALLSVFSSEVTSHL 870 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 K + + D+ L + + + + P L+ + Sbjct: 871 KVVAEFIETAQSEDYQIDLNDDLQRALHTLKGSAHMAHIEPIAEVAAGLENFTKDLRAYH 930 Query: 250 VEREKT 255 +E Sbjct: 931 IEPSAE 936 Score = 68.7 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 87/283 (30%), Gaps = 14/283 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 F E +++ + E + + ++E L + +++ GA L Sbjct: 997 DPQVLSIFLSEGMDIINEAEDLMDDWKAHPDNSELLLTLIDEMQTLEKGAQMSELPPLVA 1056 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 ++ + + ++++ ++ + + +D SQ A + Sbjct: 1057 LCQALQIAYQRIKDEALAADSELAKTIIDAHEALLNMMDMVAASQAIVPA---------K 1107 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 QL + GE P V + P + I EV + + L Sbjct: 1108 QLIADLTGEVP--VDSEEEYKQLVPDNSDLDDGPVTLDIPQVEVREEVIQQDIDPELLEI 1165 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + + + D +D + + ++ D TF+ +I+ L E Sbjct: 1166 FLEEAEELLDSISEALNDWKQDPLNLIKVAELQRDLHTFKGGARMAEINAIGDLAHELED 1225 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSM 287 G T +++ D+L ++V L Q M Sbjct: 1226 LYEGLSLGRLTATPQLFELLQICH---DRLADMVAALQDNQGM 1265 Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 84/271 (30%), Gaps = 4/271 (1%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD + F E L + + + Q E + + + RA H++KG A Sbjct: 853 NMDQA-LLSVFSSEVTSHLKVVAEFIETAQSEDYQIDLNDDLQRALHTLKGSAHMAHIEP 911 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + E +EN + R ++ + +II+ ++ K+++ + + + + Sbjct: 912 IAEVAAGLENFTKDLRAYHIEPSAEIIHFYIRGKELLDQGYQQLDSTPYAEIPGSQDLNA 971 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQ---SPRRIILSRLKAGEVDLLEEE 178 L + + + + + + S+ E Sbjct: 972 DLIRFVDQVRTDVAEDSGQKNKGQVDPQVLSIFLSEGMDIINEAEDLMDDWKAHPDNSEL 1031 Query: 179 LGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVL 238 L L ++ +S + P + + + + + + +L Sbjct: 1032 LLTLIDEMQTLEKGAQMSELPPLVALCQALQIAYQRIKDEALAADSELAKTIIDAHEALL 1091 Query: 239 KLAAEQAPTGRVEREKTTRSNESTSIRVAVE 269 + A + + K ++ + + V E Sbjct: 1092 NMMDMVAASQAIVPAKQLIADLTGEVPVDSE 1122 >UniRef50_Q0KDN3 Type IV pilus protein histidine kinase/response regulator hybrid PilL n=1 Tax=Ralstonia eutropha H16 RepID=Q0KDN3_RALEH Length = 1941 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 174/665 (26%), Positives = 293/665 (44%), Gaps = 44/665 (6%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 Q F +EA L ++ + L + D+ + RA H++KG A G L + Sbjct: 1132 DPALVQIFLEEAQGTLPELGKLLRGWEAAPEDSRHGGLVLRALHTLKGSARMAGAMALGQ 1191 Query: 65 TTHLMENLLDE-AR-RGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQA 122 H ME LLD R +G+ + + D + ++A + A D + Sbjct: 1192 AAHEMETLLDASLRGQGQQAVGPKLFERLYAWYDRILAHVEALPTGRLLPADDPD-VVNG 1250 Query: 123 LRQLALEAKGETP--------SAVTRLSVVAKSEPQD----EQSRSQSPRRIILSRLKAG 170 L ++ +A+ + P AV S+ A P D + + L R++A Sbjct: 1251 LAEVPEQAQADAPLPQADTVVEAVPAASLPAMPGPADVMVAMPPAVPAEPQRALVRVQAR 1310 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSP 230 +D L E G + + G++ ++ + +E+ Sbjct: 1311 ALDTLINEAGEVGATRARLDSELEAMRAYLGELNDNVA---------RLRGQLREIEIQA 1361 Query: 231 KISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQ 290 + + A + +E ++ TR E T R+ E V+ + + L Sbjct: 1362 ESQMASRIADAQHKQEFDPLEFDRFTRFQELT--RMMAESVNDVATVEQNL--------- 1410 Query: 291 RSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQ 350 + R R LQ +M RM+ + + R R+ R A + GK+ Sbjct: 1411 ------QRGFDRAAGDLAAQARLTRGLQRGLMQARMVQFDALAERLYRVARQAAAETGKE 1464 Query: 351 VELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQ 410 V L + G + E+D+S+++R+ P+ HL+RN++ HGIE R AAGK + G L L + + Sbjct: 1465 VRLLIKGGTVEIDRSVLDRMAGPIEHLIRNAVVHGIEAAAPRRAAGKAATGALTLEVQQE 1524 Query: 411 GGNICIEVTDDGAGLNRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVS 469 G + + DDG GL+ ERI A+A + L ++ S+ + LIFAPGFSTA+ V++++ Sbjct: 1525 GNEVVLHFVDDGGGLDLERIRARAVERRLLAPDDDASEARLTELIFAPGFSTADAVSELA 1584 Query: 470 GRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLN 529 GRGVGMDVV+ +GG + ++SK G GTT + LPLT AI + + + + +P Sbjct: 1585 GRGVGMDVVRAETVALGGRITLESKPGQGTTFTVHLPLTTAITQVLVISLGARRYAVPSG 1644 Query: 530 AVMESLQPREADLHPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSG 588 + + Q R L A + L V G +P + A + VV+++SG Sbjct: 1645 MIDQVQQLRAPALLD-AYNQGRLTVAGAEVPFFYFGALLEEGNAVAAGRKYSPVVLVRSG 1703 Query: 589 GRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQR 648 R A+ VD ++G +VVVK++ + ++ GI+ AT LGDG + LI + L +R Sbjct: 1704 AERVAVHVDDVVGNREVVVKHIGPHLARLEGIAGATTLGDGEIVLIYNPVVLAQRLVRER 1763 Query: 649 MANTA 653 Sbjct: 1764 GQPVP 1768 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 44/135 (32%), Gaps = 1/135 (0%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +EADE+L + L DA+ L+ + RA H++KG + G E Sbjct: 750 DAELLDIFLNEADEVLGGIAGDLGSGVEALHDADTLSRVRRAFHTLKGSSRMVGLHRYGE 809 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E +++ + ++ L + + + A Sbjct: 810 AAWAVEQVMNLWIAEAREPVPALLALLRRAHAELSAWAAQLHR-DAATWHDIAPLVAAAE 868 Query: 125 QLALEAKGETPSAVT 139 + + + Sbjct: 869 AVRDPGAAQAADELP 883 >UniRef50_A0Y9Q4 Sensor histidine kinase/response regulator n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0Y9Q4_9GAMM Length = 2031 Score = 502 bits (1294), Expect = e-140, Method: Composition-based stats. Identities = 183/700 (26%), Positives = 315/700 (45%), Gaps = 61/700 (8%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +EADELL ++++ + E E + + R H++KGGA G + L + Sbjct: 1183 DREILEIFLEEADELLENIDETIHSWSVERDKREYFDDMLRILHTLKGGARLAGLTSLGD 1242 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQS-------QEPDAASFD 117 +H E L +++ + + +D + EQ+ A K Q D A Sbjct: 1243 LSHNFETSLAHLEGKNGEIDENTLVSCQRYQDQLIEQIAAIKSGTGIDEGQQNIDGAFIP 1302 Query: 118 YICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEE 177 ++ + A EA E P AV K Q + R + + V+ Sbjct: 1303 IDADSVEEFASEATIEGPLAVDITVDELKPSSQTSDELDREVSRELSDLIPDARVEESAV 1362 Query: 178 ELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV 237 A+S + D I + + V+ + K + + Sbjct: 1363 CELESDNTKQGFPEAESAPDKIAVLKDVDPIKVSFPRSVAPLEAVSLAVDPAIKKAPQEM 1422 Query: 238 LKLAAE---------QAPTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGEL-VITQSM 287 +K++A+ + R + S S+ VD+L V L + T+ Sbjct: 1423 VKVSAQLLEELVNLAGETSISRGRAEEQISELVASLDDMQITVDRLQEQVRRLDMETEQQ 1482 Query: 288 LAQRSSELD---------------------------------------PVNHGDLITSMG 308 + R +++ D+ T + Sbjct: 1483 ILYRQEQVEIEGSEGFDPLEMDRYSQLQQLSRSLLESSSDLVDIKSTLAEKSRDMETLLI 1542 Query: 309 QLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIE 368 Q R DLQE +M RM+P + R R++R ++G+LGK+V+ L ELD+++++ Sbjct: 1543 QQSRINTDLQEGLMRSRMVPFSKMVPRLRRIIRQVSGELGKKVDFHLSNIEGELDRTVLD 1602 Query: 369 RIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRE 428 R++ PL H++RN++DHGIE ++R AAGK G++ L +GG I ++DDGAG+N + Sbjct: 1603 RMVSPLEHMLRNAVDHGIESTDERDAAGKPRRGSVTLDLLREGGEIVFSLSDDGAGVNFD 1662 Query: 429 RILAKAASQGLTVSE-NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGG 487 + KA +GL + N++D E+A I PGFSTAE+VT +SGRGVGMDVV I+++GG Sbjct: 1663 AVKKKAIDRGLMMPNSNLADHEIAQFILQPGFSTAEEVTQISGRGVGMDVVNSEIKQLGG 1722 Query: 488 HVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAG 547 ++IQS G G+ + LP T+++ + V V+ + + +PLN + ++ +L Sbjct: 1723 SMDIQSVAGKGSRFTVRLPFTVSVNRALMVSVSGDSYAIPLNTIEGIVRVSPFELEAYYQ 1782 Query: 548 -GERVLEVRGEYLPIVELWKVFNV---AGAKTEATQGIVVILQSGGRRYALLVDQLIGQH 603 + E G+ + + + N + +T VV+++ G A+ VD L+G Sbjct: 1783 PDAPLFEYAGQPYTLRYMGGLLNRGETPSLEGHSTPLPVVLVRGGEHAIAVQVDSLMGSR 1842 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAI 643 ++VVK L + V G+S AT+LGDG+V +I+D+ AL Sbjct: 1843 EIVVKPLGPQFSAVQGLSGATVLGDGNVVVILDLLALIRA 1882 Score = 99 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 100/292 (34%), Gaps = 10/292 (3%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 + + F +E E+LA+++Q LL + E N + RA H++KG G S + + Sbjct: 569 DPEILEIFVEEVAEVLAEIDQCLLQWNDNYSNQELGNVVRRAFHTLKGSGRMVGASDVGD 628 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +EN+L+ G + ++ +NL +E + + +DAY+ + D + I Sbjct: 629 LAWSIENMLNRVLEGSITMDAPRLNLIVEARHEIPTWVDAYEHGTDLDKSLLLSIIHRAS 688 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTT 184 + E +A D + ++ + D + L Sbjct: 689 AFSDEQDPLLEPEDVIAPTLADGAGTDAVAIAEQLIEEASGEAEQKSADNVMASL----- 743 Query: 185 LTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQ 244 + D + A + F+ + LK +A Sbjct: 744 ---FSETMDGELLEIFATEAAAHGQVLDDFISHCRDLAGPAELTDELQRALHTLKGSANM 800 Query: 245 APTGRVEREKTTRSNESTSIRVAVEKVDQ--LINLVGELVITQSMLAQRSSE 294 A V T + +R + KVD+ L L + ++ + Q +S Sbjct: 801 AGITPVVTIVTPLEHTVKELRASQLKVDEELLALLERGSLYLKAGIEQLASS 852 Score = 81.4 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 23/147 (15%), Positives = 56/147 (38%), Gaps = 1/147 (0%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +MD + + F EA ++ + + A AE + + RA H++KG A G + Sbjct: 747 TMD-GELLEIFATEAAAHGQVLDDFISHCRDLAGPAELTDELQRALHTLKGSANMAGITP 805 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + +E+ + E R +++++ +++ L ++ ++ S + D+ Sbjct: 806 VVTIVTPLEHTVKELRASQLKVDEELLALLERGSLYLKAGIEQLASSPLQPFSDADHYTA 865 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSE 148 L+ L + + Sbjct: 866 QLKSLLEYRIAKIIDTEAEEKGIPPEA 892 >UniRef50_B3R318 Response regulator receiver of TWO COMPONENT REGULATORY system (SENSOR HISTIDINE KINASE AND RESPONSE REGULATOR HYBRID) TRANSCRIPTION REGULATOR PROTEIN n=1 Tax=Cupriavidus taiwanensis RepID=B3R318_CUPTR Length = 1979 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 154/650 (23%), Positives = 270/650 (41%), Gaps = 7/650 (1%) Query: 8 FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTH 67 Q F +EA L ++ + L + DA + RA H++KG A G L + H Sbjct: 1149 LVQIFLEEAQGSLPELGKLLRGWEAAPDDARHGGLVLRALHTLKGSARMAGAMALGQAAH 1208 Query: 68 LMENLLDEARRGE--MQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 ME LLD RG+ + + D + +A + + A D + Sbjct: 1209 EMETLLDSTLRGQAQQPVAAKVFERLYAWYDRILAHAEALQAGRLLPADDPDVVNGLAEP 1268 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 + + +E ++ + L Sbjct: 1269 SPAADAAMAQPQAADGAGDSSAEAPAPALPVVPGPSDVMVPMPPAAALAPLAPLAAAEPQ 1328 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 +V+ L + E T E + + E++ ++ E Sbjct: 1329 RALVRVQARALDTLINEAGEVGATRA-RLDSELEAMRAYLGELNDNVARLRGQLREIEIQ 1387 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 ++ ++ + ++ + L + + + +A L Sbjct: 1388 AESQMASRIADAQHKQEFDPLEFDRFTRFQELTRMMAESVNDVATVEQNLQRGFDRAAGD 1447 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + R R LQ +M RM+ + + R R+ R A + GK+V L + G + E+D+S Sbjct: 1448 -LAAQARLTRGLQRGLMQARMVQFDALAERLYRVARQAAAETGKEVRLLIKGGTVEIDRS 1506 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 +++R+ P+ HL+RN++ HGIE +R AAGK + G L L + +G + + DDG GL Sbjct: 1507 VLDRMAGPIEHLIRNAVAHGIEPAAQRRAAGKPATGALTLEVQQEGNEVVLHFIDDGGGL 1566 Query: 426 NRERILAKAASQGLTVS-ENMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQK 484 + RI A+A + L ++ S+ + +IF PGFSTA+ V++++GRGVGMDVV+ Sbjct: 1567 DLARIRARAVERRLLAPDDDASEARLTEMIFTPGFSTAQAVSELAGRGVGMDVVRAETVA 1626 Query: 485 MGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHP 544 +GG + + S+ G GTT + LPLT AI + + + + +P + + Q R L Sbjct: 1627 LGGRITLASQPGQGTTFTVHLPLTTAITQVLVIALGGRRYAVPSGMIDQVQQLRAPSLLD 1686 Query: 545 LAGGERVLEVRGEYLPIVELWKVFNVAGAKTEATQ-GIVVILQSGGRRYALLVDQLIGQH 603 L V G +P + A + + VV+++SG R A+ VD ++G Sbjct: 1687 AYNHGN-LNVAGAEVPFFYFGALLEQGQAVSGGRKYSPVVVVRSGAERVAVHVDDVVGNR 1745 Query: 604 QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMANTA 653 +VVVK++ + ++ GI+ AT LGDG + LI + L +R Sbjct: 1746 EVVVKHIGPHLARLEGIAGATTLGDGEIVLIYNPVVLAQRFVRERGRTLP 1795 Score = 86.5 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 47/317 (14%), Positives = 99/317 (31%), Gaps = 13/317 (4%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 ++ F +EADE+LA + L DA+ L+ + RA H++KG + G E Sbjct: 753 DAELLDIFLNEADEVLAGIAGDLGTGVEALRDADMLSRLRRAFHTLKGSSRMVGLHRYGE 812 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 +E +++ + ++ L + + + A Sbjct: 813 AAWAVEQVMNLWLAEAREPAPALLALLRRAHAELSAWVARLH-GDAAAWHDIAPLVAAAE 871 Query: 125 QL--ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHL 182 + A A P+A A E + + + + + + + G L Sbjct: 872 AVRDAGTATEMPPAAPEVAGDDAPDEHAEAAASADTGTGASADTGTSDDNVIPFRLAGGL 931 Query: 183 TTLTDVVKGADSLSAILP--GDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPV--- 237 + D K + L ++ + F + + E +++ Sbjct: 932 SDEDDHYKVIGPVRIGLALYNVYLQEADDLLRQFATDISEWRHEAHPCPSELALRVAHTL 991 Query: 238 --LKLAAEQAPTGRVEREKTTRSNESTSIRVAVEKVD-QLINLVGELVITQSMLAQRSSE 294 P + + S VA+ D +L+ E + + ML Q ++ Sbjct: 992 QGSASTVGLEPVREIAEALEALLLQLGSHPVAMHAGDFRLLEQAAERM--RGMLHQFAAG 1049 Query: 295 LDPVNHGDLITSMGQLQ 311 + P L S+ + Sbjct: 1050 IWPQADAALRRSLVEFG 1066 >UniRef50_A6UNQ8 CheA signal transduction histidine kinase n=1 Tax=Methanococcus vannielii SB RepID=A6UNQ8_METVS Length = 957 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 171/557 (30%), Positives = 304/557 (54%), Gaps = 20/557 (3%) Query: 99 QEQLDAYKQSQEPDAASFDYICQALRQ-----LALEAKGETPSAVTRLSVVAKSEPQDEQ 153 +E L ++ E + I + + + + + + + Sbjct: 406 KELLFEINENNESIIDNNPDIRDKFENEFKENIDDKENIDDKENIDDKENIDEEINSKYK 465 Query: 154 SRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVK-------GADSLSAILPGDIAED 206 + +L ++ V + G + T + +S D +ED Sbjct: 466 IEIKVDPECMLKAVRTYMVIKDLKTKGTVLKTTPSEEQIQTGNLEGESAIIYYNSDSSED 525 Query: 207 DITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSNESTSIRV 266 +I ++ E + ET++ + S + L + ++++ + +S ++RV Sbjct: 526 EIREIILKTPEIIDTSVETLDFDHEDSVVEIKSLKIDSEKENLKKQQQAEAAKKSQTVRV 585 Query: 267 AVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQESVMSIRM 326 +EK+D+L+NLVGE+VI ++ Q +++ D +L ++G+L A +LQE VMS+RM Sbjct: 586 NIEKLDKLMNLVGEVVINRANFTQIATKYD---LKELHNAVGRLNMLATELQEEVMSMRM 642 Query: 327 MPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERIIDPLTHLVRNSLDHGI 386 +P+ +VF+R+PR VRD A LGK+++ + GS ELD+++++ + +PLTHL+RNSLDHGI Sbjct: 643 IPVGFVFNRFPRTVRDTAKALGKEIDFEIEGSEIELDRTVLDELAEPLTHLIRNSLDHGI 702 Query: 387 ELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERILAKAASQGLTV---SE 443 E E R+ +GK+ G L L A + + I + DDG G+N + + +GL +E Sbjct: 703 ETSEDRIKSGKSEKGILKLIATRERDRVNIIIKDDGKGINPDFMRKIVVKKGLYSKEEAE 762 Query: 444 NMSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGHVEIQSKQGTGTTIRI 503 ++D+E +IF PGFSTAE+V+DVSGRGVGMDVV+ ++ +GG V ++SK G GT I + Sbjct: 763 KLTDNEAVNVIFLPGFSTAEKVSDVSGRGVGMDVVRSKVESLGGSVSVKSKVGVGTEITL 822 Query: 504 LLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGGERVLEVRGEYLPIVE 563 LPLT+AI+ + V++ +++ LPL +V++ + ++ + L G E ++ R LP++ Sbjct: 823 HLPLTMAIIQTLLVKLNSQIYALPLTSVLDVVSIQKDQIKNLEGQEAII-YREHLLPVIW 881 Query: 564 LWKVFNVAGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVVKNLESNYRKVPGISAA 623 L N G + VV+++ + +++D++IG+ ++VVK L + V G++ A Sbjct: 882 LKDALNQYGTS-SSEGLYVVVVEKNKDKIGVILDEVIGRDEIVVKPLTGILKNVNGLAGA 940 Query: 624 TILGDGSVALIVDVSAL 640 TILGDG VALI+D++ + Sbjct: 941 TILGDGKVALILDLNNI 957 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 90/222 (40%), Gaps = 11/222 (4%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAE-QLNAIFRAAHSIKGGAGTFGFS 60 D+ + + F EA+E L + Q+++ L+ +AE +N IFR+AH++KG A T GF Sbjct: 1 MEDMEQYKELFMTEAEEHLQSLNQNMVELENSPENAEEIINLIFRSAHTLKGSARTLGFE 60 Query: 61 VLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYIC 120 + TH ME++LD R G +++N +I++L + D +++ + + + + + Sbjct: 61 HISSLTHHMEDILDYIRDGRIKVNREIVDLLFKCLDALEKMVSEVSEGENTTDVDVESLV 120 Query: 121 QALRQL----------ALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAG 170 ++ + + + L + + E + L Sbjct: 121 TLIKSIKSKYLSGECNSKDTVKSKTEVTPDLKLNLVEKKAKEPVTQNLTTNALKKLLLKN 180 Query: 171 EVDLLEEELGHLTTLTDVVKGADSLSAILPGDIAEDDITAVL 212 EVD + + + + + LS + I L Sbjct: 181 EVDKVIVKQKTVENIDKPENLDEILSQMQESASTLQTILDAL 222 >UniRef50_B7GX99 ChpA n=13 Tax=Acinetobacter RepID=B7GX99_ACIB3 Length = 1506 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 171/649 (26%), Positives = 292/649 (44%), Gaps = 23/649 (3%) Query: 10 QTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLM 69 QTF +EA ELL E L + + L + RA HS+KGGA G +Q + + Sbjct: 732 QTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVQAIAYQL 791 Query: 70 ENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQLALE 129 EN ++ N++I + LE+ + DA FD + Q+L + Sbjct: 792 ENAFEQFALHH--FNSNIYDHLLES--AIAWLKDAIFNHN---YQHFDGLQQSLENIQFF 844 Query: 130 AKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVV 189 + + + SEP + + E+ L +++ Sbjct: 845 ETTIQIPSKLTRADLFSSEPVMTFIQGDGTEPPPM--------MGAWEQTERLDQNNEMI 896 Query: 190 KGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGR 249 + + L + E+ I + + L+ + T Sbjct: 897 RVSADLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQI 956 Query: 250 VEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQ 309 + + S + + +++ L L L + S L + L D + + Q Sbjct: 957 IAKHGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSD-KIRDTESLLLQ 1015 Query: 310 LQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIER 369 R ++QE +M R++P + R R+VR + L + EL + + ELD++++ER Sbjct: 1016 QSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILER 1075 Query: 370 IIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRER 429 ++ PL H++RN++DHG+E +R A K G + L+ + QG ++ + +DDG G++ E+ Sbjct: 1076 LVTPLEHMLRNAIDHGLEDRAQRQQANKPETGRIELNIQRQGTDVVVVFSDDGQGIDVEK 1135 Query: 430 ILAKAASQGLTVSEN-MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488 + KA GL E + ++ LIF PG STAEQVT +SGRGVG+DVV+ +I+ +GGH Sbjct: 1136 VRQKAFLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGH 1195 Query: 489 VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPL-AG 547 V ++S G GTT I +P T+A+ D + V+VAD+ F +PL + ++ A L Sbjct: 1196 VSVESVYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFES 1255 Query: 548 GERVLEVRGEYLPIVELWKVFNVAGAKTEAT---QGIVVILQ-SGGRRYALLVDQLIGQH 603 + + E + P+ L + V++++ + G+ ALLVDQLIG Sbjct: 1256 PQELFEYENKRYPLRYLSEFVGNQPIPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSR 1315 Query: 604 -QVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQAINREQRMAN 651 Q+VVK + + + I+ ATILGDG V LI+D + + + Sbjct: 1316 AQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQRHK 1364 Score = 81.1 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 97/274 (35%), Gaps = 6/274 (2%) Query: 5 ISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQE 64 +D F +EA+ELL ++ L + E + LN + R H++KGGA + L Sbjct: 521 DADLLDIFLEEAEELLEGIDTDLNIWVGEQENFAALNNLMRYLHTLKGGANMVQATYLGL 580 Query: 65 TTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALR 124 H +E++ + + ++ +D+I+ +D + ++L + Q+ D A+ I R Sbjct: 581 IAHELESIYERLIQKQLVATSDLIDFIRLVQDDLADRL-QIMREQQLDYAAPYTINALKR 639 Query: 125 QLALEAKGETPSAVTRLSVVAKSEPQDEQSRS-----QSPRRIILSRLKAGEVDLLEEEL 179 P + Q+ S L+ L+ + + + Sbjct: 640 AGQNSNFQPLPVVEAFDTESEVFSEQEVISEVIIDEIPVELEPALAELETHHDQVFDTAV 699 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 L T +V+ S + D + + F+ EA ++ + + + Sbjct: 700 TELATPVEVITSVTSQENEVAADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNR 759 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQ 273 Q + R +++ +++ Sbjct: 760 SILLQLQRAVHSLKGGARMVGLEAVQAIAYQLEN 793 Score = 74.1 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 96/277 (34%), Gaps = 10/277 (3%) Query: 2 SMDISDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSV 61 +++ + F +EA+E LA + Q L E + NA+ RA H+++G + Sbjct: 194 EINLDETLTLFMEEAEEHLATIHQFL---DQELHQYDSYNALIRALHTLRGSSAMAQVET 250 Query: 62 LQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQ 121 + E + +E+L + E+ +++ I L E ++ +++ L+ + +S + + Sbjct: 251 IFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSR-----YSSSEQLEA 305 Query: 122 ALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLK--AGEVDLLEEEL 179 L+Q R + S Q ++ + L G + + L Sbjct: 306 RLQQFNQSWDSYVEQHGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNEFPDYL 365 Query: 180 GHLTTLTDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLK 239 L+ D++ A+L + +++ + L Sbjct: 366 ERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEVLLDKPALLQSDYIFEIYQKAHQQLI 425 Query: 240 LAAEQAPTGRVEREKTTRSNESTSIRVAVEKVDQLIN 276 + G+ + +++ + + L N Sbjct: 426 QLFDALAAGQRVGVVKQHQSILEELKLYTQYIPDLSN 462 Score = 47.9 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 85/305 (27%), Gaps = 21/305 (6%) Query: 33 EAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTDIINLFL 92 ++ + L I R H++KG G E +E+ L+ +QL I + Sbjct: 50 QSENIATLTEIRRHFHTLKGSGRMIGAKSSAELAWTVEDTLNRVINQSLQLTPTIQSYVQ 109 Query: 93 ETKDI-MQEQLDAYKQ------------SQEPDAASFDYICQALRQLALEAKGETPSAVT 139 + +D +KQ + AL +L + T VT Sbjct: 110 LVFKFYFLKLVDNFKQKRAHTLDFKPLILLGQQLQQQQSLEPALEELLQLSNTLTAETVT 169 Query: 140 RLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAIL 199 L + + + Q+ I L +EE HL T+ + Sbjct: 170 GLELDYIEQDSLAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSY 229 Query: 200 PGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRSN 259 I + + + I + +V +L++ E Sbjct: 230 NALIRALHTLRGSSAMAQVETIFEASTKVEHLFKILLQEELSSHS-------EEILLLQE 282 Query: 260 ESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLITSMGQLQRNARDLQE 319 +R ++E + + +L Q + M ++ LQ Sbjct: 283 YREFVRDSLELLSRYS-SSEQLEARLQQFNQSWDSYVEQHGDRTDPLMPSHGLVSQLLQL 341 Query: 320 SVMSI 324 V + Sbjct: 342 DVSEL 346 >UniRef50_UPI00016C4288 CheA Signal Transduction Histidine Kinases (STHK) n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4288 Length = 854 Score = 502 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 189/641 (29%), Positives = 303/641 (47%), Gaps = 23/641 (3%) Query: 6 SDFYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQET 65 + F E+++ + + L + + D E+ AI RAAHS+KG AG G + + Sbjct: 80 PELMAVFRAESEDHIRTLVTLLPEAREDPADGERWQAIRRAAHSLKGTAGLVGLHQVTQL 139 Query: 66 THLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDYICQALRQ 125 H ME+LLD G + L + D++ E ++ A + AL Sbjct: 140 AHRMEDLLDLYYEGARVATAGEVELLIAGADLIAESVEGAGA-PSGFADLHARLTAALGA 198 Query: 126 LALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTL 185 A P+A + ++ R+ +D L + +G L Sbjct: 199 AAPPPAAPAPAADAEAAEPEPEPEPAVAAQEAREAAEAYVRVPIRRLDELAKLIGELVIT 258 Query: 186 TDVVKGADSLSAILPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQA 245 ++ + A L G+ TA L V + I +E ++ + Sbjct: 259 RTALEQRVTEFARLLGEAR--PATARLGRVTDRLSIGYEASALAG--------------S 302 Query: 246 PTGRVEREKTTRSNESTSIRVAVEKVDQLINLVGELVITQSMLAQRSSELDPVNHGDLIT 305 G + + +++ + L EL T + + E + Sbjct: 303 RAGGGGGYGDGYGDGDGFDALELDRYTEFHLLTRELAETSTDVQTVFGEF-GHLLSEFDG 361 Query: 306 SMGQLQRNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKS 365 + + R + ++ +M +RM+P+ ++ R VR A K EL L G T LDK+ Sbjct: 362 QLTRQARLTSETEDKLMRLRMVPLATAAAKLHRAVRTAARTANKPAELVLEGERTGLDKT 421 Query: 366 LIERIIDPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGL 425 ++E + DPL HL+RN++DHG+E E RLA GK + G + L A H+G N+ + V DDG G+ Sbjct: 422 VLEALADPLMHLLRNAVDHGLEPAEVRLALGKPAAGRITLRAAHEGNNVALTVADDGRGI 481 Query: 426 NRERILAKAASQGLTVSENMSDDEVAML---IFAPGFSTAEQVTDVSGRGVGMDVVKRNI 482 + ER+ + L +E + L +F PGFST E+V+++SGRGVG+DVVK + Sbjct: 482 DFERVREALVRRELVTAEEAAALTEEQLPEYLFRPGFSTREEVSELSGRGVGLDVVKTKV 541 Query: 483 QKMGGHVEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADL 542 + + G V + S G GTT I +P+TLA++ G+ VR A + + LPL AV ++ R+ D+ Sbjct: 542 EALKGTVAVASAFGRGTTFTIRIPMTLAVIRGLLVRAAGQTYALPLEAVEHIMRARDEDV 601 Query: 543 HPLAGGERVLEVRGEYLPIVELWKVFNVAGAKTEAT-QGIVVILQSGGRRYALLVDQLIG 601 + G VL + +P+V L + + GA EA + VV+L GRR AL VDQL+G Sbjct: 602 DRV-GRAPVLRLGAAVVPLVPLARALGLRGADEEAAPRSPVVVLNVAGRRAALAVDQLVG 660 Query: 602 QHQVVVKNLESNYRKVPGISAATILGDGSVALIVDVSALQA 642 +VVVK+L R++PG+S AT+LGDGSV LI+ + L Sbjct: 661 GREVVVKSLGQQLRRLPGVSGATLLGDGSVVLILSPADLVR 701 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.154 0.464 Lambda K H 0.267 0.0472 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,405,076,062 Number of Sequences: 3077464 Number of extensions: 272263631 Number of successful extensions: 852591 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 14020 Number of HSP's successfully gapped in prelim test: 17842 Number of HSP's that attempted gapping in prelim test: 781617 Number of HSP's gapped (non-prelim): 56851 length of query: 654 length of database: 1,040,396,356 effective HSP length: 135 effective length of query: 519 effective length of database: 624,938,716 effective search space: 324343193604 effective search space used: 324343193604 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (41.8 bits)