 |
| Job Description | P0A705 | | Confidence | 84.23% | Date | Thu Jan 5 11:04:22 GMT 2012 |
| Rank | 377 | Aligned Residues | 27 |
| % Identity | 37% | Template | c3qkuB_ |
| PDB info |
PDB header:replication | Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; |
PDBTitle: mre11 rad50 binding domain in complex with rad50 and amp-pnp
|
| Resolution | 3.30 Å |
|
|   |   |
386 | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | A | E | P | R | A | P | V | V | T | I | M | G | H | V | D | H | G | K | T | S | L | L | D | Y | I | R |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |
|   |
|   |   |   |
|   |
|
|   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |
| Template Sequence |   |
V | V | E | F | K | E | G | I | N | L | I | I | G | Q | N | G | S | G | K | S | S | L | L | D | A | I | L |
| Template Known Secondary structure |   |
 |  |  |
|
| S |  |  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|