BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (216 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL ... 434 e-120 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 215 7e-55 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 192 8e-48 UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator... 191 2e-47 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 185 1e-45 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 182 7e-45 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 181 1e-44 UniRef50_C3K8H7 Putative two-component system, response regulato... 179 7e-44 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 177 2e-43 UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP ... 176 6e-43 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 172 9e-42 UniRef50_A1AXR1 Two component transcriptional regulator, LuxR fa... 165 1e-39 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 164 1e-39 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 163 4e-39 UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methy... 159 4e-38 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 156 5e-37 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 154 2e-36 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 154 3e-36 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 153 3e-36 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 152 5e-36 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 152 8e-36 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 151 1e-35 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 151 2e-35 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 150 3e-35 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 150 4e-35 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 149 6e-35 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 149 7e-35 UniRef50_B4EY67 Nitrate/nitrite response regulator n=9 Tax=Enter... 149 9e-35 UniRef50_A1TJW9 Two component transcriptional regulator, LuxR fa... 148 1e-34 UniRef50_C7MI23 Response regulator containing a CheY-like receiv... 147 2e-34 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 147 2e-34 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 146 4e-34 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 146 5e-34 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 146 6e-34 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 145 6e-34 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 145 6e-34 UniRef50_A3Y699 Putative two component system response regulator... 145 1e-33 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 144 2e-33 UniRef50_A6UGT6 Two component transcriptional regulator, LuxR fa... 144 2e-33 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 144 2e-33 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 144 3e-33 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 144 3e-33 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 143 3e-33 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_A6WB23 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 143 4e-33 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 143 4e-33 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 143 4e-33 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 143 4e-33 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 143 4e-33 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 142 6e-33 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 142 7e-33 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 142 7e-33 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 142 9e-33 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 142 1e-32 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 142 1e-32 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 142 1e-32 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 142 1e-32 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 141 1e-32 UniRef50_B9L455 Two-component response regulator n=1 Tax=Thermom... 141 2e-32 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 141 2e-32 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiob... 140 3e-32 UniRef50_A2SGF9 Two component transcriptional regulator, LuxR fa... 140 3e-32 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 140 3e-32 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 140 4e-32 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 139 5e-32 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 139 6e-32 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 139 7e-32 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 139 8e-32 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 139 8e-32 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=... 138 1e-31 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 138 1e-31 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 138 1e-31 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 138 2e-31 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 138 2e-31 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 138 2e-31 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_UPI00003826FC COG2197: Response regulator containing a ... 137 2e-31 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 137 2e-31 UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL ... 137 2e-31 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 137 3e-31 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 137 3e-31 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 137 3e-31 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 137 3e-31 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 137 4e-31 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 136 4e-31 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 136 4e-31 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 136 4e-31 UniRef50_C6P057 Two component transcriptional regulator, LuxR fa... 136 6e-31 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 136 6e-31 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 135 7e-31 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 135 7e-31 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 135 8e-31 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 135 8e-31 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 135 8e-31 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 135 9e-31 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 135 1e-30 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 135 1e-30 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 134 2e-30 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 134 2e-30 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 134 2e-30 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 134 2e-30 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 134 3e-30 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 134 3e-30 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 133 4e-30 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 133 4e-30 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 133 5e-30 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 132 7e-30 UniRef50_UPI0001C3195F two component transcriptional regulator, ... 132 8e-30 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 132 9e-30 UniRef50_B5JLS2 Response regulator receiver domain protein n=1 T... 132 9e-30 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 132 9e-30 UniRef50_C5C3G8 Two component transcriptional regulator, LuxR fa... 132 1e-29 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 132 1e-29 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 132 1e-29 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 131 1e-29 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 131 1e-29 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 131 1e-29 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 131 2e-29 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 131 2e-29 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 131 2e-29 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_P96686 Transcriptional regulatory protein ydfI n=5 Tax=... 130 3e-29 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 130 3e-29 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 130 3e-29 UniRef50_B4DBM9 Two component transcriptional regulator, LuxR fa... 130 3e-29 UniRef50_D0CQV3 Transcriptional regulatory protein DegU n=1 Tax=... 130 4e-29 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 130 4e-29 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_D2RAN9 Response regulator receiver domain protein n=17 ... 130 4e-29 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 130 4e-29 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 130 5e-29 UniRef50_D2S9C3 Two component transcriptional regulator, LuxR fa... 129 5e-29 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 129 5e-29 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 129 6e-29 UniRef50_D2R8T9 Two component transcriptional regulator, LuxR fa... 129 6e-29 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 129 6e-29 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 129 6e-29 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 129 7e-29 UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR fa... 129 8e-29 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 129 8e-29 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 129 9e-29 UniRef50_C6P480 Two component transcriptional regulator, LuxR fa... 129 9e-29 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 129 9e-29 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 129 1e-28 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 129 1e-28 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 128 1e-28 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 128 1e-28 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 128 1e-28 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 128 1e-28 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 128 1e-28 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 128 1e-28 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_C0GEE4 Two component transcriptional regulator, LuxR fa... 128 2e-28 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 128 2e-28 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 127 2e-28 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_C1A730 NarL family two-component response regulator n=1... 127 2e-28 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 127 2e-28 UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL ... 127 2e-28 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 127 2e-28 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 127 3e-28 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 127 3e-28 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 127 3e-28 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 127 4e-28 UniRef50_A4TWP7 Response regulator containing a CheY-like receiv... 126 4e-28 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 126 5e-28 UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax... 126 6e-28 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=... 125 7e-28 UniRef50_Q0G339 Two-component response regulator n=1 Tax=Fulvima... 125 7e-28 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 125 8e-28 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 125 8e-28 UniRef50_C5CCY4 Response regulator containing a CheY-like receiv... 125 1e-27 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 124 1e-27 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 124 2e-27 UniRef50_UPI0001C31456 two component transcriptional regulator, ... 124 2e-27 UniRef50_D1BRR0 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_C9Z3C4 Putative two-component system response regulator... 124 2e-27 UniRef50_A4FB05 Two component system response regulator n=43 Tax... 124 2e-27 UniRef50_C6VXD5 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_C2AL02 Response regulator containing a CheY-like receiv... 124 3e-27 UniRef50_UPI00018742FB two component transcriptional regulator, ... 124 3e-27 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_C9Z7N3 Putative two-component response regulator n=2 Ta... 124 3e-27 UniRef50_A4FFD8 Response regulator, two-component system n=6 Tax... 124 3e-27 UniRef50_UPI0001789139 two component transcriptional regulator, ... 124 3e-27 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 124 3e-27 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 124 3e-27 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 124 3e-27 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 124 3e-27 UniRef50_C5BYM0 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_C4DCC2 Response regulator containing a CheY-like receiv... 123 4e-27 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 123 4e-27 UniRef50_D2AWW3 Response regulator receiver protein n=6 Tax=Acti... 123 4e-27 UniRef50_C5SMW9 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_D1YA26 Response regulator receiver domain protein n=2 T... 123 5e-27 UniRef50_A9AVS1 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_A1T4U2 Two component transcriptional regulator, LuxR fa... 122 6e-27 UniRef50_A4FK96 Two-component system response regulator n=2 Tax=... 122 6e-27 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 122 6e-27 UniRef50_C1D480 Putative transcriptional regulator, LuxR family,... 122 7e-27 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 122 7e-27 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 122 8e-27 >UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL n=64 Tax=Bacteria RepID=NARL_ECO57 Length = 216 Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL Sbjct: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL Sbjct: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL Sbjct: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF Sbjct: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 215 bits (548), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 107/210 (50%), Positives = 149/210 (70%), Gaps = 1/210 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P + LIDDH + R GV Q+I P VVGEA++G +G+ LA L PD++L+DLNM G+ Sbjct: 23 PTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMKGL 82 Query: 66 NGLETLDKLR-EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 NG+ETL + + E SL R VV +VS+ E+D++ AL+ GADGYLLKDMEPEDL +L + Sbjct: 83 NGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKKVI 142 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +G V+ ++LT VL +L R D LT RE++IL+ +A GL NK IAR+L I++ Sbjct: 143 SGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGISD 202 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +TVKVH+KH+L K+KL SR+EAAVW H+++ Sbjct: 203 TTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 110/210 (52%), Positives = 147/210 (70%), Gaps = 2/210 (0%) Query: 5 EPA-TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 EP T+LLIDDH + R GV QLI M P VVGEAS+G G++LA L PD++L+DLNMP Sbjct: 2 EPVNTVLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 MNG+ETL+ +R+ + R ++ +VS++E DVV AL+ GA GYLLKDMEPE+L L +A Sbjct: 62 DMNGIETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKA 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G VLSEA+T L +L A + N L+ RE+++L + +G+ NK IAR+LDI+ Sbjct: 122 LQGTAVLSEAVTGKLFHALSAGQPLPANQSN-LSVREQEVLDYLVEGMCNKEIARKLDIS 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVKVHVKH+L K+ L SRVEA VW H++ Sbjct: 181 VGTVKVHVKHLLHKLDLHSRVEAVVWHHEQ 210 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 104/204 (50%), Positives = 141/204 (69%), Gaps = 1/204 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P T+LLIDDH + R GV QLI M P V GEA++G+ GIE+A L PD++L+DLNMP M Sbjct: 3 PHTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMPRM 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+ETL+ +R+ + R ++ +VS++E DVV AL+ GA GYLLKDM+PEDL +L +A Sbjct: 63 NGIETLEGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G VLSE++T L +L + N LT RE ++ + GL NK IAR+LDI+ Sbjct: 123 GTAVLSESVTGSLVHALSGGQRIPAAQ-NDLTARELEVFDYLVAGLCNKAIARKLDISVG 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TVKVHVKH+L+K+ L SR+EA +W Sbjct: 182 TVKVHVKHVLRKLDLHSRLEAVLW 205 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust. Identities = 96/204 (47%), Positives = 140/204 (68%), Gaps = 2/204 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 PA ILL+DDHPMLR G+ L+S+ PD VV + S+GE+ + DL++LD NMPG+ Sbjct: 11 PAKILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQNMPGL 70 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GL+T +++RE+ ++++F+VS+ +D+ ALK G +GYLLKDM+PE + + +A Sbjct: 71 SGLDTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIRKALR 130 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+V+S L VLA +LR + V+ LT RE ++K+IA+G NKMI L I+ES Sbjct: 131 GELVVSSRLAAVLAQALRT--PNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELGISES 188 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TVKVHVKH+L K L++RV+ AVW Sbjct: 189 TVKVHVKHILNKTNLRTRVDVAVW 212 >UniRef50_Q5P3L2 Nitrate/nitrite TWO-component response regulator NARL n=16 Tax=Proteobacteria RepID=Q5P3L2_AZOSE Length = 220 Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 107/207 (51%), Positives = 147/207 (71%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N P ++++IDDHP+ R G+ QL+ P +V EA++G++GI L PDL+LLDLNM Sbjct: 5 NDTPQSVVIIDDHPLFRKGLIQLLRTVPGFRLVAEAADGKEGIAHILHLRPDLLLLDLNM 64 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 M+GLE L +R+ L R+V+ +VS+ ED+V AL+ GADGYLLKDMEPE +++AL Sbjct: 65 KDMSGLEVLKFVRQADLDTRVVMVTVSDAAEDLVAALRAGADGYLLKDMEPEQMVEALQA 124 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AAAG +V+S+ALT ++AA+LR + LT +E+ IL+ IA GL NK+IAR L I Sbjct: 125 AAAGRIVVSDALTHLMAAALRQEKRPDSVTDAGLTEQEQRILERIAAGLSNKLIARELGI 184 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVW 209 E TVKVHVKH+L+K+ +SRVEAAVW Sbjct: 185 AEGTVKVHVKHVLRKLNFRSRVEAAVW 211 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 143/215 (66%), Gaps = 14/215 (6%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LLIDDH + R+GVK L+ PD VV EAS+G +G++ A+ PD+ILLDLNMPG++GL Sbjct: 5 VLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLSGL 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ETL L + S +V+ +VS E++ TAL+ GA G+L+K+++ E L+ + +AAAGE Sbjct: 65 ETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAGEP 124 Query: 129 VLSEALTPVLAASLRANRATTER--------------DVNQLTPRERDILKLIAQGLPNK 174 V++E++T ASLRA D +QLTPRE DI++ +A+G NK Sbjct: 125 VIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGASNK 184 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 IAR D+ ESTVK+HV+++LKK+ L SRV+ AV+ Sbjct: 185 EIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVY 219 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P ++++DDHP++R GV+QL+ + P VV EA +G I+LA LD D+ILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NM GM+GL+TL+ LR ++ +I++ +VS+ DV + GADGYLLKD +PE LL+A+ Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G V SE + L R E + LT RE D+L +AQGL NK IA L Sbjct: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +I+E TVKVH++++L+K+ ++SRV A + Q+R Sbjct: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 181 bits (459), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 92/207 (44%), Positives = 135/207 (65%), Gaps = 5/207 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S P ++++DDHP++R GV+QL+ + +VV EASNG + I LA PDLILLDLN Sbjct: 6 STTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLN 65 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 M G++GL+TL LR + + RI++ +VS+ DV + GAD YLLKD EPE LL + Sbjct: 66 MKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 QAA G V SE+++ L + R+ + LT RE D+L+ + +G+ NK IA +L Sbjct: 126 QAAEGRSVFSESVSAYL-----STRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLH 180 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAV 208 I+E TVKVH++++L+K+ ++SRV A V Sbjct: 181 ISEETVKVHIRNLLRKLNVRSRVAATV 207 >UniRef50_C3K8H7 Putative two-component system, response regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8H7_PSEFS Length = 219 Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 91/204 (44%), Positives = 131/204 (64%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T+LLIDDHP+ R G+ QL + D VVG+A++G +GI LA SL P +LLDL+MPG++G Sbjct: 5 TLLLIDDHPLFRKGLAQLFDASGDFEVVGQAASGREGINLAVSLTPQQVLLDLHMPGLSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L+ LD+LR+ L ++VV + S +++TAL+ GA GY+LK+ EP+ LL + G Sbjct: 65 LQVLDELRQLRLDCQVVVLTASPDRAELLTALRLGASGYVLKETEPDALLAYMRNCHKGA 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +VL L +LA + + D LT RE L LIA G+ NK I R L I++ TV Sbjct: 125 IVLDSTLIALLADQAEPSPSCDPIDSGNLTEREGQTLALIAAGMSNKQIGRELGISDGTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVH 211 K++V+ +L+K+ L SR+E A WVH Sbjct: 185 KIYVRSLLQKLGLHSRLELAAWVH 208 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 89/210 (42%), Positives = 141/210 (67%), Gaps = 5/210 (2%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q+ +LLIDDHP++R G+KQL+ + + VV + S+G +GI +A PD+I+LDLNM Sbjct: 2 QDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMK 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++GL+TL LR + + RI++ +VS+ + D+ T + GADGYLLKD EP+ LL+ + + Sbjct: 62 GLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A GE++LS+++ +L R + ++ LT RE +L+ IA GL NK IA +L I+ Sbjct: 122 AQGEVILSDSIKNLL-----LERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFIS 176 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 E TVKVH++++L+K+ + SRV A V ++ Sbjct: 177 EETVKVHIRNLLRKLNVHSRVAATVLFFEQ 206 >UniRef50_Q1ZGB3 Nitrate/nitrite response regulator protein NarP n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZGB3_9GAMM Length = 211 Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/213 (45%), Positives = 140/213 (65%), Gaps = 4/213 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MSN +++IDDHP++R G+ QL+S+ +V EA +GE+G+E A DLILLD Sbjct: 1 MSN--AIRVMIIDDHPLMRKGIAQLLSLDSKFEIVVEAKSGEEGLEFANQYQLDLILLDF 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NM G++GLETL +LR + +I++ +VS++++DV+ + GA+GY LKD + LL + Sbjct: 59 NMQGISGLETLKRLRSQGHLTKIIILTVSDNKQDVIAMINHGANGYFLKDSDASLLLSNI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 ++ AGE+VLS+ L L L E+ +N LT RER IL+ IA+G NK I+ L Sbjct: 119 NKVLAGELVLSDDLIKYL-NDLDEEDNIREK-LNNLTKRERQILQEIAKGQSNKEISINL 176 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 I+E TVKVHVK +LKK++ KSRVEAA+ Q+ Sbjct: 177 HISEGTVKVHVKSLLKKLQAKSRVEAAIVYLQQ 209 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 172 bits (435), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 95/207 (45%), Positives = 137/207 (66%), Gaps = 3/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LLIDDH + R G+++L+ I VG +GE GI+LA L PD+ILLD+ MP MNGL Sbjct: 5 VLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +LR+ L IV+ + S E+D+V L+ GA GYLLK+MEP DL+ AL + G+ Sbjct: 64 EVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGKT 123 Query: 129 VLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 V++ L +L + +++ A ++LTPRE +IL L+A+G NK+IAR L I++ T Sbjct: 124 VVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDGT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK+HVK +L+K+ + SRVEAAV Q+ Sbjct: 184 VKLHVKAILRKLGVHSRVEAAVLAVQQ 210 >UniRef50_A1AXR1 Two component transcriptional regulator, LuxR family n=2 Tax=sulfur-oxidizing symbionts RepID=A1AXR1_RUTMC Length = 209 Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 2/205 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I +IDDH + R G+ L+ + I+ AS EQG+ SL D+ILLDL MP M+GL Sbjct: 3 IYIIDDHTLFRNGLIALLE-SKQISASAAAS-PEQGLAEIPSLSVDIILLDLRMPQMSGL 60 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L L+EK+++ IV+ + S E D+ LK GA GYLLKDM+P++L+ AL++ G + Sbjct: 61 EVLKTLKEKNITTPIVMLTTSTQEYDLRNCLKHGAQGYLLKDMDPDELVDALNEVVKGSI 120 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V+++ +T +LA +LR E + LT RE+++ ++ G NK+IAR L I++ TVK Sbjct: 121 VVAQDMTYILAKALRDELTDNEPSFDSLTSREKEVACQVSSGYSNKVIARELGISDGTVK 180 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQE 213 +HVK +LKK+ L SRVE AV V Q+ Sbjct: 181 LHVKSILKKLSLSSRVEVAVMVTQK 205 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 84/204 (41%), Positives = 129/204 (63%), Gaps = 3/204 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH + R GV ++ P I VVGEA NG + IE ++L PD+ LLD++MP NGL Sbjct: 12 VLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIHMPVCNGL 71 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ET K+RE + + +I++ +VS EE + A+K GA GY+LK + PE L++ + Q GE Sbjct: 72 ETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVRQVYEGEP 131 Query: 129 VLSEALTPVLAASLR---ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 V+ +L + A R + V +LT RER++L+ ++ G NK IAR L I+E+ Sbjct: 132 VVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIARALFISEN 191 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TV+ HV+H+L K+ L +R +AA + Sbjct: 192 TVRNHVRHILDKLHLSNRAQAAAY 215 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 85/203 (41%), Positives = 137/203 (67%), Gaps = 3/203 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH MLR GV ++S D+ V+GEASNG++ +EL L PDL+L+D+NMP ++G+ Sbjct: 3 VLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDGV 61 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E KL++ ++V+ +VS ++D+ A+K GADGYLLK++ PE+L+ +L A +GE Sbjct: 62 EATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGEA 121 Query: 129 VLSEALTPVLAASLRANRATT--ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +S + + R RA T ++ QL+PRE ++L+L + GL K IA +L + EST Sbjct: 122 PISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAEST 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVW 209 VK H++H+L+K+ L++R EA + Sbjct: 182 VKNHMRHILEKLHLRNRSEAVGY 204 >UniRef50_Q5MJZ1 Nitrate/nitrite regulatory protein n=1 Tax=Methylophaga aminisulfidivorans RepID=Q5MJZ1_9GAMM Length = 226 Score = 159 bits (403), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 80/211 (37%), Positives = 133/211 (63%), Gaps = 4/211 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +++++DDHP+ R GV +L++ + ++TV+ E N E ++ E+ PD++LLD+ MPG Sbjct: 5 PISVVVVDDHPLFRRGVVELLNDSEEMTVIAEYDNAEALLDNIENTYPDILLLDMQMPGK 64 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GL L +LRE +I++ + N ++ ++ AL+ GA+GYL KD P+++L L Sbjct: 65 SGLGVLKQLREHDNQLKIIIITACNEQDKLLEALRYGANGYLQKDTPPDEILSQLMSVLH 124 Query: 126 GEMVLSEALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPNKMIARRLD 181 G + ++ LA+ LR N+ ++ +T RER+ L IA+GL NK+IAR L Sbjct: 125 GNVAMNAGAVTSLASHLRENKDDENNPSSAILSHMTERERETLFYIAKGLNNKLIARELG 184 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 I++ TVKV+VK +L+K+ L SR+E A W H+ Sbjct: 185 ISDGTVKVYVKSLLRKVNLHSRLELAAWAHR 215 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 90/203 (44%), Positives = 124/203 (61%), Gaps = 4/203 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LLIDDH + R G+++L+ I VV G+E PD++LLD+ MPG+NGL Sbjct: 3 VLLIDDHALFRFGLQELLERR-GIEVVAAVGESSTGLERVAETRPDVVLLDMRMPGLNGL 61 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +LR S I + + S E DV+ +L+ GA GYLLKDMEP+ L+ AL + G Sbjct: 62 ELLRRLRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAALGEIVQGRT 121 Query: 129 VLSEALTPVLAASLRANRA---TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 V++ LT VLA ++R LTPRE++IL +A+G NK IAR L I+E Sbjct: 122 VVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIARELGISEG 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAV 208 TVK+HVK +L+K+ + SRVEAAV Sbjct: 182 TVKLHVKAILRKLDVHSRVEAAV 204 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 81/207 (39%), Positives = 133/207 (64%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+L+DDH + R G+ +L+ + +I V N ++ L ++ PD+++LDLNMPG +G+ Sbjct: 6 IILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMPGTDGI 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +LR + I++ ++S E+D+ AL+ GA+GYLLK MEP++++ A+ +A GE Sbjct: 66 TLMQQLRNAGFALPILILTLSETEDDLARALRAGANGYLLKSMEPDEVVDAILRAQRGET 125 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V++ A+T L ++ LTPRER+IL +++G NK IAR LDI+ TVK Sbjct: 126 VVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLDISHDTVK 185 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERI 215 +HV+H+L K+ L SRVEAAV+ + ++ Sbjct: 186 LHVRHILAKLNLSSRVEAAVFAVEHKV 212 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 79/217 (36%), Positives = 134/217 (61%), Gaps = 9/217 (4%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +++ DD ++R G+K ++S+ +I V+GEA NGE+ I L ++ D+IL+D+ MP ++G Sbjct: 3 NVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIIDG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E ++E+ + ++++ + N +E + A+K GADGYLLKD+ E ++ A+ G Sbjct: 63 VEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNGA 122 Query: 128 MVLSEALTPVLAASLRA----NRATTERD-----VNQLTPRERDILKLIAQGLPNKMIAR 178 M+L +T + + + ++ + E D +N LTPRE D+ KL+AQG NK I R Sbjct: 123 MLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDICR 182 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L +TE TVK +V +L K++L SR E AV+++Q I Sbjct: 183 SLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 133/208 (63%), Gaps = 1/208 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDH ++R GV+ + DI VVGEA+NG++ +E+ L PD+IL+D+ MP M+G+ Sbjct: 7 VLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMDGI 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + ++R++ L GRI+ + ++ + A+K GA GYLLKD P++LL+A+ + GE Sbjct: 67 QAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRGEP 126 Query: 129 VLSEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L+ + + + L +E + LTPRE D LKL+A+G NK IA + ++E+TV Sbjct: 127 SLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEATV 186 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + H+ +L K+ L +RVEA ++ +E I Sbjct: 187 RTHMTSILSKLHLANRVEATLYALREGI 214 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 132/214 (61%), Gaps = 11/214 (5%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P IL++DDHP+ R+G++ + P +VGEA++G + + LA+ L PD+IL+DL++PGM Sbjct: 3 PINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPGM 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NGLE L+ + +++ ++ +E + A++ GA Y KD+EPE L+ + + A Sbjct: 63 NGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVAR 122 Query: 126 GEMVLSEAL--TPVLAASL--------RANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 GE +++E + P +A+ + R +R T+ + LTPRE +IL +A+G NK Sbjct: 123 GEYLINEMVLSRPFVASRVLDQFRELSRLDR-TSSGFFSPLTPREIEILDCVARGYSNKE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 IA+ L+I++ TVK H+ +L+K+ + R +A ++ Sbjct: 182 IAQALNISDQTVKNHITSILRKLAVNDRTQAVIY 215 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 127/211 (60%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ Q P +LL+DD ++R G+K + P+I +VGEA +G+ I A++L PD+IL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP M+G+ ++ ++++ + + E +V A+++GA GYLLK+ PED ++++ Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 QA G + L L L L+ +TPRE+D+LKL+A G N+ I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 ITE TVK HV +L ++ ++SR + A+W + Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWAN 212 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 82/203 (40%), Positives = 129/203 (63%), Gaps = 6/203 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDH ++R G++ + + DI VVGEAS+GE+GI AE L PD+IL+D+ MPG +G+ Sbjct: 10 VLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTDGI 69 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +LRE + R+++ + + VV AL+ GA GY+ KD++P+ L A+ AG + Sbjct: 70 EALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAGHV 129 Query: 129 VLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +L P +A +L + ++ + LT RER++L IA G N+ IAR L ++E T Sbjct: 130 LLQ----PEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKT 185 Query: 187 VKVHVKHMLKKMKLKSRVEAAVW 209 VK HV ++L K+ + R +AA+W Sbjct: 186 VKTHVSNILMKLDVADRTQAALW 208 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 128/201 (63%), Gaps = 1/201 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL++DDH LR ++ ++ D+ VVGEAS+G+ +E E+ PD IL+D+N+PG NG+ Sbjct: 7 ILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKNGI 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + +++ + R++VF++ H+E ++ AL+ GADGYLLKD E ++ A+ G+ Sbjct: 67 EATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRGDS 126 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V+ +T L + + E + N+LT RE++IL + +GL NK IA L I++ TVK Sbjct: 127 VIHPRMTKKL-ITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKTVK 185 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 +H+ + KK+ +KSR +A ++ Sbjct: 186 IHINKIFKKLNVKSRSQAVIY 206 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 152 bits (385), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 132/210 (62%), Gaps = 1/210 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M++ E TIL+ DDH ++R G+++++ + PD+ VVGEA+ G++ IE+ P +I++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPG+NG+E +R++ I+ ++ + EE ++ L+ G GY+LKD+ E+L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVN-QLTPRERDILKLIAQGLPNKMIARR 179 +Q A G V+ + + ++ + T V+ LT RER+IL ++ G N+ IAR Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 L I+E TVK H+ H+ K+ + R +AA++ Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALY 210 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 152 bits (384), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 123/201 (61%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDHPM R ++ L+ P V+GEA NGE+ L + PDL+L+D+NMP +GL Sbjct: 6 VLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSGL 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ ++V+ SVS+ D++TA++ GA GYLLK++EP+D + LH + Sbjct: 66 EATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGEDS 125 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L+ + L R AT E LTPRER+I+ + G N+ I+ L I E+TVK Sbjct: 126 ELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTVK 185 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 H+K++L+K++L +RV+ A + Sbjct: 186 NHLKNILEKLQLANRVQLAAY 206 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 9/200 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP +R G+ LI P + VV EAS+GE+ IE+ + L PD++L+DL MPGM G+ Sbjct: 22 VLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMGGV 81 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + +R+K+ R++V S + +ED+ AL+ GA YLLKDM E++ + AG+ Sbjct: 82 EAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAGDT 141 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L ++ A R T QLT RERD+L+ + +G NK IA L I+E TVK Sbjct: 142 SLPRSV---------AERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVK 192 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 H+K + K++++ R AA+ Sbjct: 193 SHLKTLFAKLRVRDRTGAAI 212 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 4/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL DD M+R GV+ +++ P+I VV EA +G + I+L S PD++LLD+ MP M+GL Sbjct: 4 VLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMDGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +LR + +V+ + ++ + AL GA G+LLK +P +LL +H A G Sbjct: 64 AAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEGAA 123 Query: 129 VLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 LS + + L R T V LTPRERD+L L+ +GL N IARRL + E Sbjct: 124 YLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYLVE 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK HV +L ++ ++RV+AA+ H+ Sbjct: 184 GTVKAHVSAILTRLGARNRVQAAILAHE 211 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 81/205 (39%), Positives = 128/205 (62%), Gaps = 7/205 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG- 64 P + L+DDH ++R G+ ++ PDI VVGEA+NGE +++A + D+I++D+ MPG Sbjct: 3 PIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPGG 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G+ET +L+ I++ S + V+ AL+ GA Y+ K+ +PE LL+A+ A Sbjct: 63 IDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGAM 122 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 AG+ VL+ AL R A T + + LT RER++LKL+A+GL N IA RL ++E Sbjct: 123 AGKAVLAPALMQ------RILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSE 176 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVW 209 TVK HV +L+K+ L R +AA++ Sbjct: 177 ETVKTHVASILRKLGLAHRTQAAIY 201 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 150 bits (378), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 131/208 (62%), Gaps = 10/208 (4%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++LL+DDH + R G+ L+S PD TVVGEA++GE+ +E A L PD++L+D+++PG++G Sbjct: 5 SLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGIDG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +++ + R+V+ +V + E + ++K GA GYL+K++ +LL L A GE Sbjct: 65 IEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARGE 124 Query: 128 MVLSEALTPVLAASLRANRATTERDV------NQLTPRERDILKLIAQGLPNKMIARRLD 181 +S +AA + A ER L+PRE ++L+L+A L NK IA RL Sbjct: 125 AAISRR----MAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLS 180 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVW 209 I+E TVK H+K++L K++L SR +AA + Sbjct: 181 ISEHTVKNHLKNILAKLQLSSRRQAAAY 208 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 149 bits (376), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 81/213 (38%), Positives = 125/213 (58%), Gaps = 6/213 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DD P++R G+ L+++ PD+ VVGEA +G + +A+ L PD+ LD+ MPG++G+ Sbjct: 4 VLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLDGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEED--VVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 +L + I V ++ + D V AL+ G G+LLKD EPE + A+ Q AAG Sbjct: 64 AVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVAAG 123 Query: 127 EMVLSEALTPVLAASLRANRA----TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + + LT + R+ +T R LT RE++IL L+AQG+ N IAR L + Sbjct: 124 NGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTLVV 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 STVK H+ ML K+ ++SR++A VW +Q R Sbjct: 184 ELSTVKSHLARMLPKLGVRSRLQAVVWAYQNRF 216 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 78/209 (37%), Positives = 128/209 (61%), Gaps = 1/209 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I++ DDH M+R G+K L+ + DI V+ EA NGE ++ ++ PD++LLD+NMP MNG Sbjct: 4 NIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMNG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE L L+++ +++V +V N E ++ A+ G +GY+LKD E +L KA+ A GE Sbjct: 64 LEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADGE 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + +L P L + + + E ++ LT RE ++LK +A G N+ IA+ + I+E TV Sbjct: 124 TYIQPSLIPALNSKM-IQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERTV 182 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K H+ + KK+++ R +AAV+ + I Sbjct: 183 KNHISSIFKKLEVTDRTQAAVFAIRNNII 211 >UniRef50_B4EY67 Nitrate/nitrite response regulator n=9 Tax=Enterobacteriaceae RepID=B4EY67_PROMH Length = 207 Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 78/201 (38%), Positives = 131/201 (65%), Gaps = 5/201 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +I+++DDHP++R G++ L+ + VV E+ N ++ I A+ L+PDLI++DL++ G +G Sbjct: 5 SIMIVDDHPIMRYGLRLLLEQDKEFIVVSESGNAQEAITTAKQLNPDLIMMDLHLQGRSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + LR L+ ++V S+S+ DV AL GA+GYLLK+ E + LL +L +A G Sbjct: 65 IDIIRSLRRCGLTSYVLVLSISDSRNDVYAALDAGANGYLLKECELDMLLLSLRKAVVGR 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 V SE + + LR N + ++ LT RE D+L+ +A G+ NK IA L I+E TV Sbjct: 125 PVYSEKVWQYI--QLRQNYSDP---LSALTKRELDVLQEVAVGMKNKQIAENLFISEETV 179 Query: 188 KVHVKHMLKKMKLKSRVEAAV 208 KVH++++LKK+++ SR+ A++ Sbjct: 180 KVHIRNILKKLQVTSRLAASL 200 >UniRef50_A1TJW9 Two component transcriptional regulator, LuxR family n=17 Tax=Betaproteobacteria RepID=A1TJW9_ACIAC Length = 256 Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 85/231 (36%), Positives = 131/231 (56%), Gaps = 27/231 (11%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + ++DDH + R G+ L+S P + V GEA + + + LA L P ++LLD ++PG+ G+ Sbjct: 22 VFVVDDHTLFRRGLIALLSQYPSLRVAGEAGDAGEALRLAPPLAPQVLLLDNHLPGVRGI 81 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + LRE R+++ +VS ED+ AL+ GA GYLLK +E + L A+ +AA GE Sbjct: 82 DAIRGLREAMPDVRVLMLTVSEDGEDLAQALRHGAQGYLLKTIEGDLLADAIGRAARGEP 141 Query: 129 VLSEALTPVLAASLRANRATTERD---------------------------VNQLTPRER 161 V+S L L A+ +A R+ + L+ RE Sbjct: 142 VVSMELMGKLVAAFQAQGGPPAREPRADAGAAAVAVTQAPAEGTGPGAAGSASPLSAREE 201 Query: 162 DILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 D+L+ IA+G NK IAR LDI E+TVK+HV+H+L+K+ L SRV+AAV+ + Sbjct: 202 DVLREIARGASNKEIARALDIAETTVKIHVQHILRKLGLSSRVQAAVYASE 252 >UniRef50_C7MI23 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcineae RepID=C7MI23_BRAFD Length = 238 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 86/217 (39%), Positives = 124/217 (57%), Gaps = 11/217 (5%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L+ DDHP + +G+ L+ APD+ VV +A +GE + A PD++L D+ MPG Sbjct: 24 PIRVLVADDHPAVLSGLVALLDSAPDLAVVAQAGDGETALAAAREHRPDVVLTDVRMPGA 83 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 G+E LRE ++V S + +E V+ AL GADGYL+K +P+ +L A+ Sbjct: 84 TGIEITPALRET--GAHVLVISGFDLDEYVLGALAAGADGYLVKTEDPQRILAAVRDVHR 141 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQ--------LTPRERDILKLIAQGLPNKMIA 177 G+ VLS A T + A LR RA+ + T RE D+L L+AQG N+ IA Sbjct: 142 GDAVLSAAATRAVVAELR-GRASGHPAAGRSAVGPEPPFTRREEDVLALVAQGRTNQQIA 200 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 R L + +TVK H+ H L K++L SRV+AA+W Q R Sbjct: 201 RELFVEVTTVKSHLSHALVKLQLDSRVQAALWWQQHR 237 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 129/214 (60%), Gaps = 10/214 (4%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L+ DDH ++R G+KQ+I + PDI V+G A++GE+ + + L PD++LLD++MP NG Sbjct: 12 NVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPKQNG 71 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++TL +L++ + +I++ + E + + GA+GY+LKD E E L+KA+ G Sbjct: 72 IQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVYQG- 130 Query: 128 MVLSEALTPVLAASL------RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 + P LA L R ++ + ++LT RE ++L L+A+G+ NK I L Sbjct: 131 ---LNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLF 187 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 I+E TVK HV ++ KK+ + R +AA++ ++ I Sbjct: 188 ISEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 131/212 (61%), Gaps = 9/212 (4%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 L++DD ++R G++ L+ APDI VVGEA++G + L E L PD++L+D+ MP ++G+E Sbjct: 5 LVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVDGIE 64 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 +L + +++ + ++ V AL GA GYL+KD EP D+L A+ +AA GE + Sbjct: 65 ATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARGEPL 124 Query: 130 LSEA-LTPVLAASLRANRATTERDVNQ--------LTPRERDILKLIAQGLPNKMIARRL 180 L+ + L V+ + R++ A D+ Q LT RERD+L L+ GL N IAR L Sbjct: 125 LAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIARDL 184 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 ++ +TVK H+ +L+K+ +++RV+A + H+ Sbjct: 185 NVGVTTVKTHIVALLEKLGIRNRVQAGILAHR 216 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 129/207 (62%), Gaps = 5/207 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ILL+DDH ++R G+K L ++ PD V+GEA++G Q IEL E L PD+IL+D+++P + Sbjct: 9 PIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPLL 68 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ +++ + +I+ S +H+ V+ L GADGY LK++E E+LL + + Sbjct: 69 DGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLISH 128 Query: 126 GEMVL----SEALTPVL-AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G + L + ++ +L + S TT + V L+ RER ILKLIA+G NK IA +L Sbjct: 129 GGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQL 188 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAA 207 ++ T+K +V+ +L K+ + RV+AA Sbjct: 189 FLSPGTIKSYVRMLLNKLSVDDRVQAA 215 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 125/211 (59%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P +L++DDHP++R G++ + VVGEAS+G Q + A PD++L+DL Sbjct: 7 GDSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLR 66 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M G+E + +LR + + R++V + + E DV+ A++ GA GYLLKD EDL++A+ Sbjct: 67 MPTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVR 126 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAAG+ VL+ + L ++ A + LT RE ++L+L+A G N+ AR+L Sbjct: 127 AAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLF 186 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 I+E+TVK H+ H K ++ R A ++ Sbjct: 187 ISEATVKTHLLHAYAKFGVRDRAAAVAEAYK 217 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 73/214 (34%), Positives = 136/214 (63%), Gaps = 9/214 (4%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++L+DD ++R G+K ++S+ +I+++ EA NG+Q +++ + + PD+IL+D+ MP MNG Sbjct: 3 NVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMNG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E ++EK + ++++ + N +E V+ ++ GADGY+LKD D++K++ A G+ Sbjct: 63 VEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNGD 122 Query: 128 MVLSEALTPVLAASLRANRATTE--RDVNQ-------LTPRERDILKLIAQGLPNKMIAR 178 ++L A+T L + + + R +N+ LT RE D+ KL+AQG NK I Sbjct: 123 ILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDICH 182 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L +TE TVK ++ ++ +K++L SR E A++++Q Sbjct: 183 TLFLTEGTVKNYLTNIFEKLELSSRTELALFINQ 216 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 145 bits (367), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 128/209 (61%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N +L++DDH + R G++QLI P I VVGEA+NG+ +++ L PD++L+D+ Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDI 81 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGM+G+ + + ++ +++ ++ + EE V+ A++ GA YL+K+ +PE+LL+A+ Sbjct: 82 NMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 H AA G + L P+L + L+ RE +L+L+AQG N+ IA L Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVW 209 ++ ESTVK ++ + +K+ ++ R +A ++ Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIY 230 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 79/212 (37%), Positives = 130/212 (61%), Gaps = 4/212 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+++DD ++R+G+ ++ DI VV E +NG + IE A+ PDLIL+D+ MP M+GL Sbjct: 5 IVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMDGL 64 Query: 69 E-TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 T L + ++ RIV+ S + +E + AL+ GA G++LKD P++L+ A+H A G Sbjct: 65 SATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQGG 124 Query: 128 MVLSEALTPVL---AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +L+ ++T L A L+ + +++LT RE++ILK +A G N IA RL I E Sbjct: 125 ALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFIGE 184 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 STVK HV +L K++L+ R +A ++ ++ + Sbjct: 185 STVKTHVSSLLSKLELRDRAQAVIFAYENGVI 216 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/206 (35%), Positives = 124/206 (60%), Gaps = 9/206 (4%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 EP +L+ DDHP++R G+K + + PD++VV EA +G++ + L + +PD++LLDLNMPG Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMPG 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G + L +L +++V + V A+ GA G+L KD++P+ L +A+ A Sbjct: 63 SDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSVA 122 Query: 125 AGEMVLS-EALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G+++ + EA+T A A V LT RER++L L+A G N+ IA++L + Sbjct: 123 DGQVIFAREAVT--------AMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVA 174 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVW 209 E TVK H+ + +K+ + R +AA++ Sbjct: 175 EKTVKTHLSSLFRKLGVADRTQAALY 200 >UniRef50_A6UGT6 Two component transcriptional regulator, LuxR family n=2 Tax=Sinorhizobium RepID=A6UGT6_SINMW Length = 212 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 81/200 (40%), Positives = 115/200 (57%), Gaps = 3/200 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T+LL+DDHP+L G++ +I+ APD T+VG ++G + I L L PD+ +LD+ MPGM G Sbjct: 4 TVLLVDDHPLLLRGLQDIIAAAPDFTIVGATASGVEAISLISRLQPDIAVLDVAMPGMGG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE L LR R++ + + V ALK G G LLK+ PE LL + Q A G Sbjct: 64 LEILRALRGTHRFTRVIFLTATISGPQVAEALKMGLSGLLLKEYAPEALLDCMRQVAMGG 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L L AS + T ER + LTPRER+I LI GL N+MIA RL +E T+ Sbjct: 124 KWLPADLME--KASQVSEDVTLER-FSLLTPREREIAALICGGLSNRMIASRLGTSEGTI 180 Query: 188 KVHVKHMLKKMKLKSRVEAA 207 +H+ ++ +K+ + +R A Sbjct: 181 GIHLHNIFRKLDISNRATLA 200 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 78/212 (36%), Positives = 115/212 (54%), Gaps = 9/212 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q P ++L DDH M+R G+ + + PD +V EA G++ I + PD+ LLD +P Sbjct: 3 QRPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M G+E LR + RI++ S N EEDV A++ GA+ YLLK+ +++ A+ Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG ++ +LAA +R +LTPRE+ +L I +G NK I L+IT Sbjct: 123 HAGSPYFPPEISAILAARMRR---------EELTPREKSVLFEIVKGSSNKEIGCCLEIT 173 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ES VK+HV H+L+K+ K R AA Q I Sbjct: 174 ESAVKIHVTHLLQKLNAKDRTHAATIAIQRGI 205 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 128/208 (61%), Gaps = 1/208 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ P T+LL+DDHP++R G ++L+ D+ VVGEA +GE+ I A L PD+IL+D++ Sbjct: 10 AHTRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVS 69 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPGMNG+E ++ + I+V + + + V L+ GA GYLLK+ ++LL A+ Sbjct: 70 MPGMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAGE L A+ + ++ T + + L+PRE ++L++ A G NK IAR LD Sbjct: 130 AVAAGESALHPAVARKVLERFSTHQTPTPPE-DALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVW 209 I+ TV+VH+ ++ K+ + SR EA ++ Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 78/215 (36%), Positives = 129/215 (60%), Gaps = 8/215 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL DDH +LR G+K++++ D+ VVGEA +G++ + L PD++LLD+NMPG+ GL Sbjct: 5 ILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLTGL 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +L++ +I+ ++ + + V+ LK GA GYLLKD+EP L+KA+H G Sbjct: 65 DVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEGNP 124 Query: 129 VLSEALTPVL--AASLRANRATTERDV------NQLTPRERDILKLIAQGLPNKMIARRL 180 + L L +S+ + +++ +LTPRE D+L IA+GL N+ I + L Sbjct: 125 FVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGKAL 184 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++E TVK H+ + K+K+ R +A V+V + +I Sbjct: 185 GLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKI 219 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 75/216 (34%), Positives = 138/216 (63%), Gaps = 4/216 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH + R G++ ++ PDI +V EAS+G + + A PD++LLD+ MP Sbjct: 85 DPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+E ++E S +I++ ++S+ E D+ A+K GA GYLLK++ +++ A+ Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVH 204 Query: 125 AGEMVLSEALTPVL----AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ ++S ++ L A+ ++ A + +LT RE ++L+L+A+GL N+ IA++L Sbjct: 205 GGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQL 264 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK HV+++L+K++L SR+EA V+ +E++ Sbjct: 265 FISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLL 300 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 124/200 (62%), Gaps = 4/200 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + L+DDHP + G+K ++ I +VG + NGE+ I+ L+P++ ++DL +PG+NG+ Sbjct: 4 VYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLNGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++K+ +++ S N E++V+ A+ GA Y++KD PE L++A+ A GE Sbjct: 64 EVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRGEP 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V LTP +A + A R LTPRE+++L + +G N+ IA+ L I+E+TVK Sbjct: 124 V----LTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETTVK 179 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 HV ++LKK+ +K R +A + Sbjct: 180 THVSNILKKLDVKDRTQAVI 199 >UniRef50_A6WB23 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A6WB23_KINRD Length = 242 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 83/228 (36%), Positives = 136/228 (59%), Gaps = 21/228 (9%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD P+ R+G+ +++ A + VVGEA++G+Q +EL E L+PD++LLDL MP + G+ Sbjct: 10 VLVVDDQPLARSGITGILAGAAQVQVVGEAADGQQALELMEELEPDVVLLDLRMPVLGGV 69 Query: 69 ETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 E L +LR E+ + R+VV + + +++VV A+ GADG+L K +P+D+L+A+ A+G Sbjct: 70 EVLRRLRAQERFAAVRVVVLTTFDGDDEVVQAMAAGADGFLSKASDPDDILQAITSVASG 129 Query: 127 EMVLSE-ALTPVLA-------ASLRANR-----------ATTERDVNQLTPRERDILKLI 167 ++ LS+ AL V+A A RA R A V LT RERD++ + Sbjct: 130 DIALSQRALRAVVAGLPTPTPADDRAQRTGAGGEGAVEVARLRARVELLTARERDVVVAV 189 Query: 168 AQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 A+GL N I L I+ TVK HV + K++++ R + ++ I Sbjct: 190 ARGLDNTQIGEELFISPLTVKTHVSRAMTKLRVRDRAQLVAIAYRAGI 237 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/204 (36%), Positives = 128/204 (62%), Gaps = 3/204 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ +DH ++R G+ L+ PDI VVGEA NG + I++ E L PD++L+D++MP +NG+ Sbjct: 6 VLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPELNGM 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +L++K +I++ S+ + EE + L+ GA GYL+K P DL+KA+H A AG+ Sbjct: 66 DATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAHAGDC 125 Query: 129 VLSEALT-PVLAASLRANRATT--ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 LS +++ V+ ++ + + R ++ L+ RER++L+LIA+G N+ IA L I+ Sbjct: 126 FLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLYISPK 185 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TV+ H H+ KK+ L E + Sbjct: 186 TVEAHRNHIQKKLGLNGTAELTKY 209 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 127/215 (59%), Gaps = 7/215 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + ILL DDH + R G+K+++ M D+ V GEA NGE+ ++ + L P++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP +NG+E ++E S +++ ++ EE + +K GA G+LLKD+E L++A+ Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDV-------NQLTPRERDILKLIAQGLPN 173 + G + +T L + R++ ++LT RE++IL+L+AQG N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 K I++ L I+E TVK HV ++L+KM + R +A + Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVI 218 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I++ DDH ++R G++ + DI VVGEA+ G + + + E PDL+L+DL+MP M+G+ Sbjct: 3 IVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDGI 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + K ++ I+V + + +E V+ AL+ GA Y LKD EPE+L+K Q GE Sbjct: 63 QAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGGEY 121 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 LS A+ P + ++ + QLT RE+D+L IA G NK IA L I+E TVK Sbjct: 122 KLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTVK 181 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 HV ++L K+++ R +AA++ Sbjct: 182 THVSNLLAKLEVADRTQAALF 202 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 12/218 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD ++R+G++ L+ A DI ++ EA+NG + IELA L PDLIL+D+ MP M+GL Sbjct: 5 VIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMDGL 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L ++L +++ + +E V+ AL+ GA GY+LKD PEDL+ A+ AA G Sbjct: 65 EATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANGTR 124 Query: 129 VLS----EAL--------TPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMI 176 LS E+L T V AS + + LT RER+I + +AQG+ N + Sbjct: 125 TLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNAQV 184 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 AR L ++ +TVK H+ + K+ + +RV+ A+ V++ R Sbjct: 185 ARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 77/201 (38%), Positives = 123/201 (61%), Gaps = 5/201 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + L+DDH ++R GV+ L+ P ++VVGEA +G++ + ++ D++L+DL+MP M+G+ Sbjct: 4 VYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + R++V + + E V L GA GY+LKD EP DLL A+H AA GE+ Sbjct: 64 EATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARGEV 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + P +A +L + A ++L+PRE +L+L+AQGL NK +AR L ITE TVK Sbjct: 124 ----PIDPRVAGALLPS-AGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERTVK 178 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 H+ + +++ + R AA+W Sbjct: 179 AHLGRVFREIGVLDRTSAALW 199 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 130/206 (63%), Gaps = 6/206 (2%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +++DD ++R G+ L+++ ++ VVG A++G++ + +AE L P++IL+D+ MP +NG+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 +RE+ ++++ + N E + AL++GA GYLLKDME + +++A+ AG V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 LSEALTPVLAASLRANRA------TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 L + +T + L+ + + V QLT RE D+L+ I GL NK IA +L IT Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVW 209 E TVK HV +++ K++L+ R +AA++ Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIY 206 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 125/209 (59%), Gaps = 8/209 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL DDH ++ G+ ++M PD +VGEA NG++ +E A L PD++L+DLNMP M+G+ Sbjct: 5 ILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIMDGI 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++E+ +++V + + +V AL+ GA GY+LKD+EP+ L +A+ A G + Sbjct: 65 EASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYKGNI 124 Query: 129 VLSEALTPVLAASLRA--------NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 L ++ L + + ++ + LTPRE ++L+L+ +GL NK IA+ L Sbjct: 125 QLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIAQTL 184 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVW 209 + E TVK HV +L K+ L R +AA++ Sbjct: 185 IVAEKTVKTHVSSILSKLDLSDRTQAALF 213 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 128/204 (62%), Gaps = 5/204 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH ++R G+ +L+ + DI VVGEA +G + ++ PDL+LLDLNMP Sbjct: 2 KPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPR 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M G+ + K++E S ++++ ++ + EE V ++ GA+GY+ KD++PE+L +A+ + Sbjct: 62 MGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVI 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ V P + + +V +L+ RE+++L+L+AQG+ NK IA+ L I+E Sbjct: 122 KGDKVF-----PRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISE 176 Query: 185 STVKVHVKHMLKKMKLKSRVEAAV 208 TVK HV ++L+K+ + R +A + Sbjct: 177 KTVKNHVSNILRKLSVNDRTQAVI 200 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust. Identities = 78/211 (36%), Positives = 135/211 (63%), Gaps = 4/211 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD + R G+ L+ I VVGEA +G +G LA + PD++LLD+ MP +G+ Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGI 60 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++E S +I++ +VS+ E D+ A+K GA GYLLKD E++ +A+ A G+ Sbjct: 61 EACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQS 120 Query: 129 VLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKMIARRLDITES 185 ++S ++ L + + ERD +LT RE ++L+L+A+G+ N+ IA+ L I+E+ Sbjct: 121 LISPSMAVKLIDEFK-QMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISEN 179 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV+++L+K++L SR+EA ++ +E++ Sbjct: 180 TVKNHVRNILEKLQLHSRMEAVMYAVKEKLL 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 130/204 (63%), Gaps = 4/204 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DDHP+ R G+ L++ +V EA++G +G++LA PDL+LLD+ MP MNG Sbjct: 8 ILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEMPVMNGP 67 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L ++ + +++ ++S +++ L+ GA GY+LK+ + + L++A+ QA AG+ Sbjct: 68 EALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQAVAGQQ 127 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +S + S+ + ++ LT RERD+L+ +A G+ NKMIARR+ ++E+TVK Sbjct: 128 TVSPEMNNA-GQSIPPEHSAI---LDSLTQRERDVLRYVAGGISNKMIARRMFLSENTVK 183 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 H++++ +K+ + +RV AAV+ + Sbjct: 184 AHMQNIFRKLNIDNRVRAAVYARE 207 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 78/204 (38%), Positives = 122/204 (59%), Gaps = 9/204 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL++DDH ++R G+ L++ P V+ EA +G + I L PD+ ++DL +P MNG+ Sbjct: 12 ILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLRLPRMNGV 71 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + ++RE+S RIVV + + +ED+ AL+ GA GYLLK M+ +DL A+ AG Sbjct: 72 EAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIRSVHAG-- 129 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 ++ P + A A R + ++LT RE D+L+LI QG N+ IA L I+E+TVK Sbjct: 130 ---KSRIPTVVAERLAERMSG----SELTARELDVLRLIVQGRSNREIAADLHISEATVK 182 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 H+ ++L K+ + R +AA Q Sbjct: 183 THINNLLSKLGVSDRTQAATTALQ 206 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 5/200 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + +++DH R G++ + PD+ VVGEA + E+GIE D++L+D+ +PGM+G+ Sbjct: 4 VFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMDGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E KL ++ R+VV +V E +V+ A+ GAD Y LK +P LL A+ AA G Sbjct: 64 EA-TKLVKERFGVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG-- 120 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 S L P +A + + QL+PRE ++L+LIA+GL NK IA+RL I+ STVK Sbjct: 121 --STYLDPQIAHIVLGQLSVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLSTVK 178 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 H++ +L K+ R +AA+ Sbjct: 179 THIEELLAKLSASDRTQAAI 198 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 80/218 (36%), Positives = 128/218 (58%), Gaps = 21/218 (9%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD ++RTG+ L+S DI VVG+A NG + +EL SLDPD++L+D+ MP M+G+ Sbjct: 5 VLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMDGV 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E KL E+ +++ + + +E V+ ++ GA GYLLKD++ L ++ A G Sbjct: 65 EATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGGGA 124 Query: 129 VL-------------SEALTPVLAASLRANRATTERDVNQ-LTPRERDILKLIAQGLPNK 174 ++ S A TPV A+S + DV LTPRERDIL+L+AQG N+ Sbjct: 125 LIHPQIIAQLLPRLASLAPTPVTASS-------SPSDVTSILTPRERDILRLLAQGYTNQ 177 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 I +L ++ TVK H+ + K+ ++ R +AA+W + Sbjct: 178 EIGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWARE 215 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 123/201 (61%), Gaps = 5/201 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH ++RTG+ LI+ A D+ VVG A++G + +E L P ++L+DL+MP ++G+ Sbjct: 4 VLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ E+ S ++V + + + V+ AL GA GY+LKD EP DLL A+ A G Sbjct: 64 AATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARGH- 122 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L P +A ++ R + R +LT RE+++L L+ GL NK IARRL I ESTVK Sbjct: 123 ---SPLDPRVARTVLHARRSPVR-AAELTEREQEVLALVGHGLANKQIARRLGIRESTVK 178 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 H+ + +++ ++ R A +W Sbjct: 179 AHLTSVFQRIGVRDRTSATLW 199 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/206 (40%), Positives = 126/206 (61%), Gaps = 9/206 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL+ DDHPMLR G+ ++ P VVGEA +GE+ + LA L PD++LLDL MPG G+ Sbjct: 6 ILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTGGV 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +LR ++VVF+ + +E ++ AL+ GA G LLK ++ A+ AG Sbjct: 66 EVLRRLRGLDDPPKVVVFTAYD-DERLLEALREGARGCLLKGASRTEIFDAVRTVHAGGS 124 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V+ +T A L+ R +E LTPRE ++L+L+A+GL N+ +AR L I+E TVK Sbjct: 125 VIPPEIT---ARVLKEMRGESE----PLTPRELEVLRLVARGLTNREVARALFISERTVK 177 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQER 214 HV +L K++ ++R + AV + +ER Sbjct: 178 FHVSSLLAKLRAENRTQ-AVAIARER 202 >UniRef50_B9L455 Two-component response regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L455_THERP Length = 213 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 77/212 (36%), Positives = 131/212 (61%), Gaps = 4/212 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + +P + +IDDH ++R G+K +++ PD VVGEA++G G+ + +++ PD++++D+ + Sbjct: 2 SWQPLRVAIIDDHEIVRNGLKHILADDPDFLVVGEAADGPSGVAMVDAVRPDVVIVDVRL 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M G + +RE+ RI++ S +E V + GA GY+LKD+ DL K L Sbjct: 62 PSMQGDDVCRLIRERVPETRILILSAFGEDELVYRCVLAGAQGYVLKDIVHFDLKKTLKM 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 A GE VL + V+ LR +A T+ L+P + +L+LIAQGL N+ IA RL + Sbjct: 122 IARGEAVLDPRVASVVVERLRNRKAITD---IPLSPHQLSVLRLIAQGLSNREIADRLFL 178 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +E+TVK +V+ +L+++ ++R+E AV + ER Sbjct: 179 SENTVKGYVQEVLRRLGARNRLE-AVMIANER 209 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 76/201 (37%), Positives = 118/201 (58%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDH M+R G++ + + I V GEA++G + E A L+PD+ILLDL MPG++G+ Sbjct: 10 VLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMPGVDGV 69 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ LRE + R++V + ++ A++ GA GY+ KD++P L A+ AG + Sbjct: 70 GAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSVHAGHV 129 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +L + L S A LT RER++L LIAQG N+ IAR L + E TVK Sbjct: 130 LLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLAEKTVK 189 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 HV ++L K+ + R +AA+W Sbjct: 190 THVSNILMKLGVADRTQAALW 210 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 79/228 (34%), Positives = 127/228 (55%), Gaps = 20/228 (8%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N+ I++IDDH + R GVK++++M P+ VV + +GE +EL E +PD+IL+D+NM Sbjct: 6 NENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG+E L ++ +++V S+ + E V LK GA GYLLK+M+ + L++A+ Sbjct: 66 PKVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKV 125 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQ--------------LTPRERDILKLIA 168 A G + +T L R E++ ++ LT RE ++L+L+ Sbjct: 126 VAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMT 185 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV------WV 210 G N+MI L I+E TVK HV ++L+KM + R +A V WV Sbjct: 186 DGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWV 233 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 122/203 (60%), Gaps = 10/203 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + L DDHP++ G++ L++ P+I +VGEA++G + + + + DPD+ ++D++MPG+NGL Sbjct: 7 VALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDVSMPGLNGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +++ R++V +V V LK GA GYLLK EDLL+A+ AAG + Sbjct: 67 ELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVAAGGI 126 Query: 129 VLSEALTPVLAASLRANRAT------TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 L P +A+ A+ AT TE L+PRE D+L+LIAQG NK IARR D+ Sbjct: 127 YLD----PSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDL 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVE 205 + +++ + +K+ L++R E Sbjct: 183 SVKSIETYKARAAEKLGLRTRAE 205 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 124/204 (60%), Gaps = 5/204 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL++DDHP++R G+ ++ + D+ + EA N E+ I++ P++ L+DLN+ +GL Sbjct: 3 ILIVDDHPLVRKGIASILFLEKDVHEIKEAENIEEAIDMMAKFSPEITLIDLNLGRQDGL 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++K R K ++ + +V + S+ ED + A + G DGY+LK+ ED+L AL G+ Sbjct: 63 EIVNKARAKGMATKFIVLTSSSKREDFLRAREAGVDGYILKEAFAEDILYALRIVLRGKK 122 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + + + +R N +++LTPRERD+L + +GL N I ++L I+E TVK Sbjct: 123 FIDPEVIQYQTSDIREN-----SHLDELTPRERDVLTELGKGLSNFEIGKQLFISEHTVK 177 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 HV ++L K++L R +AA++V+ Sbjct: 178 KHVSNILSKLELNHRTQAALFVNN 201 >UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67L26_SYMTH Length = 224 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 84/213 (39%), Positives = 132/213 (61%), Gaps = 17/213 (7%) Query: 11 LIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLET 70 ++DDHP++R G++Q++S+ PD+ VVGEA + ++ + LA+ L PD+ILLDL +P GLE Sbjct: 1 MVDDHPLVRNGIRQVLSLEPDMEVVGEAGDDQEALRLAQELRPDVILLDLALPRRTGLEL 60 Query: 71 LDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVL 130 L +LRE+ ++V+ + S E+D + AL+ GA GYL+K M PE L + +A G++ + Sbjct: 61 LPRLREELPETQVVILTYSASEQDAIAALQAGAAGYLVKSMAPEALAARIREAFRGDVPV 120 Query: 131 SEALTPVLAASLRANRATTERDVNQ--------------LTPRERDILKLIAQGLPNKMI 176 S + V+ LRA +E L+PRE IL+ IA G N+ I Sbjct: 121 SGS---VMRNVLRAMSTPSELPPPTPGGQPGAGEAAESLLSPREAQILRRIAAGNTNREI 177 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 A +L ++E+TVK +VK +L K+ L++RV+AA W Sbjct: 178 AEQLGLSENTVKNYVKSILAKLNLENRVQAAAW 210 >UniRef50_A2SGF9 Two component transcriptional regulator, LuxR family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGF9_METPP Length = 240 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 81/225 (36%), Positives = 129/225 (57%), Gaps = 19/225 (8%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q P ++++DDH + R G+ L++ VV EA + + + E + PD++LLD ++P Sbjct: 6 QLPIRVVVVDDHTLFRRGLVTLLAADGRFEVVAEAGDAGEAQGVVERMRPDVLLLDNHLP 65 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++G++ L L + R+++ ++S D+V AL RGA GYLLK E ++L A+ A Sbjct: 66 GVSGVDALPALLSAAPGMRVLMLTMSEDHADIVAALSRGAAGYLLKTAEIDELGDAIVSA 125 Query: 124 AAGEMVLSEALTPVLAASLRA-------------------NRATTERDVNQLTPRERDIL 164 +G LS + LAA A +RA + QL+ RER+ L Sbjct: 126 ISGSASLSAPVALKLAAGAIATAQMAVSATEVHATPPSARDRAVPADPLAQLSARERETL 185 Query: 165 KLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 L+A+G NK+IAR+L I E+TVK+HV+++L+K+ L+SRV AA W Sbjct: 186 ALVAEGCSNKLIARQLGIAEATVKIHVQNLLRKLGLESRVHAAAW 230 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/209 (36%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DD P++R ++ L + DI VVGEASNGE+ ++ L P +IL+D+NMP M+G+ Sbjct: 11 LLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMDGI 69 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + L ++ ++++ +V N E VV A++ G Y+LKD PE L++ + A G Sbjct: 70 QALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEGRY 129 Query: 129 VLSEALTPVLAASLRAN--RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + ++ L +L R +++ LT RE+++L+LI GL NK IA +L+IT T Sbjct: 130 FVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITLRT 189 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK HV +L K+ + R +AAV QE + Sbjct: 190 VKAHVSSILMKLNVNDRTQAAVLAIQENL 218 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 79/204 (38%), Positives = 120/204 (58%), Gaps = 5/204 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +LL+DDH ++R G++ +S+ I VVGEA+NGE+ + AE L PD++++DL MP M Sbjct: 9 PVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLMMPVM 68 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G++ LR + ++ + + E V A+ GA GY+LKD + L A+H AA Sbjct: 69 DGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIHAAAR 128 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+ L L R T LTP+E +L+LIA+G N+ IAR +TE+ Sbjct: 129 GEVRLHPEAARRLVRDFR-----TPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEA 183 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TVK HV +L K+ L+SR +AA++ Sbjct: 184 TVKTHVSRLLGKLGLESRTQAALY 207 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 8/201 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDHP+LR G+ L+ PD+ ++GEA++GE+ I + L PD++L+DL MP + Sbjct: 7 PIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMDLQMPRL 66 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E + ++R RI+V + + V AL+ GA YLLKDM +L+ + A Sbjct: 67 DGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIRMVAG 126 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G + P +AAS+ A+ ++L+PRE ++L+ +A GL NK I R+ I+E Sbjct: 127 GR---RAPIPPAVAASIAAHVVE-----DRLSPRETEVLRHVAGGLSNKRIGERMQISEQ 178 Query: 186 TVKVHVKHMLKKMKLKSRVEA 206 TVK H+K ++ K+ + R A Sbjct: 179 TVKAHMKSLMDKLGVGDRTHA 199 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 139 bits (350), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 129/214 (60%), Gaps = 10/214 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+IDDHP+ R G++ + A D+ VVGEA NG++ I+LAE L PD++L+D+N+PG+NGL Sbjct: 7 VLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLPGLNGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ + ++V SV ++ + A+K GA Y KD+ P DL++ + + A G+ Sbjct: 67 EVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREVARGKY 126 Query: 129 VLSEALT--PVLAA----SLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIAR 178 ++++++ P +A R AT + + LT RE +IL IA+GL NK IA Sbjct: 127 LINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSNKEIAS 186 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 +L I+ TVK H+ +L K+++ R A ++ Q Sbjct: 187 QLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQ 220 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 75/215 (34%), Positives = 130/215 (60%), Gaps = 8/215 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N+ +++ DDH + R G+K L+ + +VGEASNG++ +EL +L PDL+L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLE-SEGFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MP M GL+ + + S +++V + S ++D+ A+K GA G++ K++E E+ + L Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 HQAAAGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPN-KMIA 177 GE A+TP LA L +R + LT RE++IL+L+ G+ + K ++ Sbjct: 1552 RNVIRGE----PAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLS 1607 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 R+L ++E TVK H++++L K+ L+SR + W Q Sbjct: 1608 RQLGVSEHTVKYHLRNILSKLHLQSRAQVVAWAVQ 1642 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 3/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++++DDH ++R G++ L+ PD++VV EA NG + ELA L P ++L+D+ MPG+NG+ Sbjct: 4 VMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLNGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +L R+++ S+ + V A + GA GYLLKD +L++A+ Q A GEM Sbjct: 64 DATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACGEM 123 Query: 129 VLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + + V+ R + T+ +V LTPRER++L+LIA+G K A +L+I T Sbjct: 124 YVCHGIIGVVVHDYVTRLPESLTQPEV-PLTPREREVLQLIAEGNNAKNAAYQLNINVKT 182 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 V H + ++KK+K++S E + +E Sbjct: 183 VDTHRQQIMKKLKMRSVAELTKYAIRE 209 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 139 bits (349), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 79/215 (36%), Positives = 127/215 (59%), Gaps = 8/215 (3%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 Q +IL+++D ++R G++ ++ + I VVGEA +G +G+ A L PD+IL+D+ M Sbjct: 2 QQSDISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDVQM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNG+E + + RI+V + + ++ V +++ GA GYLLKD E LL+ + + Sbjct: 62 PVMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTIRR 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIAR 178 AGE+ + P +A+ AT R L+ RER++L L+AQGL N+ IA Sbjct: 122 VHAGEVFIQ----PEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAG 177 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 RL ITE TVK HV ++L K++ ++R +AA +E Sbjct: 178 RLSITEGTVKNHVSNILAKLQAENRTQAANIARRE 212 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 119/198 (60%), Gaps = 5/198 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP++R G+ ++ D VG+A++G+Q + L E PD++LLDL +P ++G+ Sbjct: 4 VLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLSGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + R + + R +V + + +E + AL GA GYLLKD PE++ +A+ G Sbjct: 64 EVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEGGA 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L + A+ R TE ++L+ RE D+L+L+ +G NK IA L+I+E+T+K Sbjct: 124 ALQSGI-----AARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENTIK 178 Query: 189 VHVKHMLKKMKLKSRVEA 206 HV H+ K+ ++SR EA Sbjct: 179 SHVSHIFSKLDVRSRAEA 196 >UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=Corynebacterium RepID=C3PHX2_CORA7 Length = 215 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 131/213 (61%), Gaps = 6/213 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +++L+DD LR G++ ++ A DI VV EASNG +G+ L PD++L+D+ MP M+G Sbjct: 3 SVVLVDDEQALRRGIRFILEGAADIEVVAEASNGREGVARVLDLQPDVVLMDIRMPVMDG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E KLR + +V+ + + +E +V AL GA G+LLK +EPE L+ A+ AA G+ Sbjct: 63 IEAAGKLRASAPDIPVVMLTAFDTDEFIVDALHAGAMGFLLKTIEPEGLVLAVRAAATGQ 122 Query: 128 MVLS-EALTPVLA-----ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 +LS +AL +LA + A R + L+ RE ++ +L+AQGL N+ IA +L Sbjct: 123 QLLSPKALKNLLALKRPEPAPAEPEALEARPLEGLSQRENEVAQLVAQGLDNQEIAGQLY 182 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ++ +TVK H+KH+L K+ +RV A+ V + R Sbjct: 183 VSVTTVKTHIKHILDKLGGTNRVHIAIAVLEAR 215 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 123/208 (59%), Gaps = 3/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD P++R G+ ++S P VVGEA NG Q + LA L PD++++D+ MP ++G+ Sbjct: 13 VLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIRMPVLDGV 72 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE- 127 +L R++ S + +E VV AL+ GA G+L KD PEDL A+ AGE Sbjct: 73 GATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIRTVHAGEA 132 Query: 128 MVLSEALTPVLAASLRANRAT--TERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 V LT +++ +RA T T + +LTPRE ++ +L+A GL N I+R LDI+ S Sbjct: 133 AVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISRTLDISLS 192 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVK ++ + K+ ++ R +A + ++ Sbjct: 193 TVKNYITSIFDKLAVRDRAQAVIVAYES 220 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 72/209 (34%), Positives = 132/209 (63%), Gaps = 2/209 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDH ++R G+++++S+ P I+VVGE +NG+Q ++ D++L+D+NMP MNG+ Sbjct: 7 LLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDINMPIMNGI 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ + + I+ ++ + +E + +K G GY+LKD+ P+ L+K + A GE Sbjct: 67 EACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTILGVAQGES 126 Query: 129 VLSEALTP-VLAASLRANRA-TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +LT VLA R + +E+ LT RE ++LK +A+G NK IA L I+E T Sbjct: 127 FIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANALYISEKT 186 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK H+ ++ +K+ + R +AA++ +E++ Sbjct: 187 VKNHLTNIFQKIGVADRTQAALYAIKEKL 215 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/194 (34%), Positives = 128/194 (65%), Gaps = 6/194 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDHP+ R G++ +S+ DI V+ EA NG+Q +E+ + DL+L D+NMP M+G+ Sbjct: 4 VLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALEILNKMPVDLVLTDINMPQMDGM 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 L+ ++E+ LS ++V+ S+ +++E ++ ++ GADGY+LKD+ ++L++A+ + AAG+ Sbjct: 64 YLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGADGYILKDVPGKELIEAIKKVAAGKR 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 S + L+ L + + +T RE+ +L+LI+ G+ NK IA+ +D++ TV+ Sbjct: 124 YFSADVINTLSQELASGKQAL------VTQREQLVLRLISLGMNNKRIAQEMDVSVRTVE 177 Query: 189 VHVKHMLKKMKLKS 202 H +++ +K+ + S Sbjct: 178 THKRNIKQKLMIDS 191 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 120/208 (57%), Gaps = 9/208 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH M+R G+ + I+ D+T+VGEA+NG Q +E PD++ +D +PG +G Sbjct: 7 VLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLPGADGA 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E+ LR + R+VV SV EED+ A++ GA GY+ K E E++L+A+ GE Sbjct: 67 ESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCVVGGET 126 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 P AS A+R T RD LTPRE +L I GL NK IA L ++E+TVK Sbjct: 127 YF-----PAPIASKLASRRT--RDA--LTPREHQVLHHIVAGLSNKEIAAALHMSEATVK 177 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +H+ + L K+ + R +AA+ Q I Sbjct: 178 LHISNTLAKLHVADRTQAAIVAVQRGII 205 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 78/206 (37%), Positives = 117/206 (56%), Gaps = 9/206 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M +P IL++DDH ++R+G+ + + D+ VVGEA N + + PD++L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +PG NG LR + R+++F+ + EED+ A++ GA GYLLK E+LL A+ Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAGE LS AL LA + A ++ RER++L+LIA+G NK IA L Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAA---------PDVSDREREVLQLIARGKANKEIAAAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEA 206 I+E TVK H ++ KM + R +A Sbjct: 172 GISEETVKRHASNLFVKMGVADRAQA 197 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 127/202 (62%), Gaps = 5/202 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++L DDH +R G+K L+ +I VVGEA +G +E+ + PDL+++D+ MP + G+ Sbjct: 7 VVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADALEVVTATKPDLLIVDIRMPNLTGI 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++KLR ++ + +I++ S+ EE V+ ++K GADGYLLK E+ LKALH ++G Sbjct: 67 EVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGADGYLLKGSSKEEFLKALHAVSSGGK 126 Query: 129 VLSEALTPVLAASLRANRATTE-----RDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 S ++ +L + L + A+ E + +T RE++IL L+ G NK IA L+I+ Sbjct: 127 YFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEIAEALEIS 186 Query: 184 ESTVKVHVKHMLKKMKLKSRVE 205 + T +VH +++KK+K+K+ +E Sbjct: 187 KRTAEVHRFNLMKKLKVKNLME 208 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 72/200 (36%), Positives = 124/200 (62%), Gaps = 2/200 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DDHP+LR G+++++ I VV E +G+ I ++ +LD D++L+DLNMPG+NGL Sbjct: 4 VVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVNGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +R ++ + I+V +V + +E V L+ G GYLLKD++P+ L+ ++ + +G+ Sbjct: 64 EACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSGQP 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +LS A+T L L T RD L+ RE IL + +G N+ I + L I+E TVK Sbjct: 124 ILSPAVTGKLLGQLV--HPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKTVK 181 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 H+ + +K+ ++ R +AA+ Sbjct: 182 NHLSSIFRKLAVEDRTQAAL 201 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 82/214 (38%), Positives = 119/214 (55%), Gaps = 11/214 (5%) Query: 5 EPATI--LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 EP I L+ DDHP++ G+ +I+ PD+TVVG+A G + + LA PD+IL+DL M Sbjct: 19 EPGVIRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRM 78 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 PGM+G+E + +R + ++V + +ED+ AL GA YLLK M LL+A+ Sbjct: 79 PGMSGVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRS 138 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G A+ + L NRA L+PRE DIL+LI +GL N+ IA L+I Sbjct: 139 VRTGHTYFPRAIRNSVPGKL--NRAA-------LSPREMDILRLIVRGLSNQEIADALNI 189 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T TVK HV +L+++ + R +A V Q I Sbjct: 190 TRGTVKWHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 74/200 (37%), Positives = 119/200 (59%), Gaps = 7/200 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH + R G ++++ D+ VVG+A++GE + + L P ++L+D+ +PGMNG+ Sbjct: 8 VLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMNGI 67 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++RE+ R+++ + + EE V A GA GYL K +L++A+ A G Sbjct: 68 EATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGGNS 127 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 VL P L A+L A R++ N LT RER +L+L+A+G+ NK IA RL I+ TV+ Sbjct: 128 VLQ----PTLMAALLAKRSSP---ANTLTDRERAVLRLLAEGMHNKQIASRLGISARTVE 180 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 H + K+ + SR EA V Sbjct: 181 RHCDRIYGKLGVTSRTEAVV 200 >UniRef50_UPI00003826FC COG2197: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003826FC Length = 217 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 79/208 (37%), Positives = 126/208 (60%), Gaps = 4/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++++DD +LR G+ +L+ APD+ VVGE +G + +ELA LDPD +LLD+ MP M+GL Sbjct: 4 VVVVDDEALLRAGIVRLVDTAPDLDVVGEGGDGARAVELARELDPDALLLDMRMPVMDGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + L + + +VV + +E V+ AL+ GA GYLLKD PE+L + A AG+ Sbjct: 64 DALVAIHRERPRTAVVVLTSFLADEYVLPALRAGAAGYLLKDSTPEELHHGIRAAVAGDS 123 Query: 129 VLSEALTPVLAASLRAN----RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +LS A+ L A+ + RA R + +L P+E++++ +A GL N I RRL + E Sbjct: 124 ILSPAVARHLLAAAGGDGTARRADARRRLARLAPQEQEVVAALAGGLSNAEIGRRLFLAE 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 STVK ++ H + K+ +R + A+ H+ Sbjct: 184 STVKAYLAHAMTKLGTTNRTQTAILAHE 211 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 1/201 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DD ++R G++ L A DI VVGEA G+ + LA L PDL+L+DL MPGM+G+ Sbjct: 4 VLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMDGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ + S R+V + + ++ + AL GA G+L+KD P +LL+A+ +AA G+ Sbjct: 64 TATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADGDT 123 Query: 129 VLSEALTP-VLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 S + ++ +++RA + + +LT RER++L L+ G N IA RL + +TV Sbjct: 124 PFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVTTV 183 Query: 188 KVHVKHMLKKMKLKSRVEAAV 208 K H+ ++ K +RV AV Sbjct: 184 KTHIASLMTKTGCSNRVRLAV 204 >UniRef50_D0WKH1 Nitrate/nitrite response regulator protein NarL n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WKH1_9ACTO Length = 212 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 71/201 (35%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +I++ DDHPM+R G+K +I ++ V+GEAS G + +EL E L PD++LLDL MP M+G Sbjct: 3 SIVMADDHPMIREGIKSMIEKYANLKVLGEASGGARALELVEKLRPDVLLLDLRMPDMSG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + K + S +I++ ++ + + D++ A++ GA GY+LKD+EP L +A+ A+G Sbjct: 63 SDVARKALQISPDTKILILTMYDTDRDILAAIEAGASGYVLKDIEPFRLAEAIRATASGR 122 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 VL E + S+R ++ + V +L+ +E+ +L L A+G+ N+ IA L + +TV Sbjct: 123 TVLDERAARAVTQSVRGG-SSADGGVEELSEQEKRVLALAAEGMTNRQIATALGVGAATV 181 Query: 188 KVHVKHMLKKMKLKSRVEAAV 208 K + K+ + R A V Sbjct: 182 KTYFSRAFAKLDVVDRTSAVV 202 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 121/203 (59%), Gaps = 1/203 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++LL+DDH + R ++ L+ PDI V+GEA +G +LAE PD+IL+D++MPG++G Sbjct: 24 SVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVDG 83 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + L+ + +I++ ++ + V+ A++ GAD YLLK+ E ++ A+ A GE Sbjct: 84 VTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARGE 143 Query: 128 MVLSEAL-TPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 V+ L T +L R + E V LT RE +L+L+A G+ NK IA L + EST Sbjct: 144 SVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAEST 203 Query: 187 VKVHVKHMLKKMKLKSRVEAAVW 209 VK + + +K+ +K R +AA++ Sbjct: 204 VKNRLSLLFEKLDVKDRTQAAIY 226 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 77/202 (38%), Positives = 120/202 (59%), Gaps = 9/202 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL++DDHP++R G+ ++ D+TVVGEA +G+Q ++ L PD++L+DL MPG +G+ Sbjct: 4 ILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + +++ + R+VV + + +E ++ A++ GA GYLLK ED+ +A+ G Sbjct: 64 QAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG-- 121 Query: 129 VLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 L PV+A L NR E +LT RE D+L L+A+GL NK IA L ITE Sbjct: 122 --GSLLEPVVAGKL-LNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITE 178 Query: 185 STVKVHVKHMLKKMKLKSRVEA 206 TVK H + +K+ + R EA Sbjct: 179 RTVKFHANAIYRKLDVSGRTEA 200 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 123/198 (62%), Gaps = 3/198 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +LL DDH ++R G++ ++ P+I VVGEA+NG + ++LA L PD++L+D++MP Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPV 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNGLE ++R+ +++ S+ ++ E V ++ GA GY+LKD+ +++ A+ A Sbjct: 63 MNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVA 122 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +G S A+ P L + A A E D LT RER +L IA+GLPNK +A+ L I+ Sbjct: 123 SGGYYFSSAVGPTLVGT--ATSAPIE-DPYGLTDRERQVLTAIAKGLPNKEVAKSLGISV 179 Query: 185 STVKVHVKHMLKKMKLKS 202 TV+ H ++ +K+ K+ Sbjct: 180 RTVESHRLNLREKVGNKN 197 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 6/213 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S EP +LL+DDHP+LR G++ L+ VVGEA +GE+ I L SL+PD++++DL Sbjct: 14 SIGEPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLV 73 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG+ G+E L ++ ++V ++S + V AL+ GA GY+LK + D + A+ Sbjct: 74 MPGVTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVR 133 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERD--VNQLTPRERDILKLIAQGLPNKMIARR 179 A GE V P +A +R T +LT RER+IL L+A G N IARR Sbjct: 134 AVARGEAVYG----PAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARR 189 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L +++ TVK H+ + K+++ R +A V + Sbjct: 190 LFLSQKTVKNHLTSIFAKLQVADRTQAVVRARR 222 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 12/206 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++L DDH + RTG L++ P+ VVG+A++G+Q I+L + L PD+ +LD+ MP +NGL Sbjct: 7 LVLADDHEVTRTGFVSLLAGHPEFEVVGQAADGQQAIDLCQELQPDIAILDIRMPVLNGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 L+++ ++V+F++ + + + A+ GA GYLLKD ++++ L + A GE Sbjct: 67 GAARILQQRMPGLKVVIFTMDDSTDHLEAAMSAGAVGYLLKDASRDEVIDGLQRVARGEE 126 Query: 129 VLSEALTPVLAASLRANRATTERDVN------QLTPRERDILKLIAQGLPNKMIARRLDI 182 L+ A+ S R R TER+ + LTPRER +L L+A G N+ I +L I Sbjct: 127 ALNSAV------SARLLRRMTERNTSGAALPETLTPRERQVLGLVAGGFSNREIGEKLGI 180 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAV 208 T T K HV+ ++ K+ R +AAV Sbjct: 181 TTGTAKAHVEKVIGKLGASDRTQAAV 206 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 74/209 (35%), Positives = 124/209 (59%), Gaps = 2/209 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++ + L DD P++R G + +I+ D+TV GEA +G I LA+ PD+IL+D+ M Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +G+E + + +IV+ + + EE V ++ GA GYLLKD PE+L+ A+ Sbjct: 62 PRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRA 121 Query: 123 AAAGEMVL-SEALTPVLAASLRANRATTERDVNQ-LTPRERDILKLIAQGLPNKMIARRL 180 AA GE + + +++ + RA + T ++ + T RE ++L+ +A GL N+ IA +L Sbjct: 122 AARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVW 209 ++ESTVK HV +L+K + R +A V+ Sbjct: 182 FVSESTVKTHVHRILQKCNAQDRTQAVVF 210 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 1/209 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DDH ++R G+K +I + ++GEA+NGE+ + E PD+IL+DLNMP M+G Sbjct: 4 NVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKMSG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LET++ L +K I++ + N +E ++ ++ GA GYLLKD + E+L + L A GE Sbjct: 64 LETIEVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIRGE 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 ++L + + R + N LT +E +LK IA+G NK IA + I E TV Sbjct: 124 ILLQPNIMEKIVNYKRKEIHANVVEENNLTEKELFVLKAIARGNKNKDIAFDMGIAERTV 183 Query: 188 KVHVKHMLKKMKLKSRVEA-AVWVHQERI 215 K ++ ++ K+ + SR EA AV + ++ I Sbjct: 184 KAYLTNIYNKLGVNSRSEAVAVSIEKKLI 212 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 123/210 (58%), Gaps = 3/210 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T++L+DDH ++R G + L+S P+I VVGEA GE+ +L PD+I++DL++PG+ G Sbjct: 6 TVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEACQLYADTRPDVIVMDLSLPGIGG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L ++ ++R + S RI+VFS+ + VV AL+ GA GY+ K PE L++A+ + A+GE Sbjct: 66 LASIRRIRSRDTSARILVFSIHDELIYVVRALEAGARGYITKSCAPEILVEAVARIASGE 125 Query: 128 MVLSEALTPVLA-ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + LA +L ATT +N L+ RE D+ L+A+G + +A L + T Sbjct: 126 SFLEPEIAQRLAMQTLGGAEATTA--LNTLSAREFDVFLLLAKGYTTREVAEELRLGYKT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V + + K+ + + E A +Q IF Sbjct: 184 VANYSTLIKSKLGVNTTAEMARLAYQNGIF 213 >UniRef50_C6P057 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P057_9PROT Length = 235 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 81/211 (38%), Positives = 130/211 (61%), Gaps = 9/211 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESL---DPDLILLDLNMPGM 65 I+L+DD + R G+ +L+S V+G IE SL PDL+++DL M M Sbjct: 7 IVLVDDQSLCRRGLSELLSRCYGFNVLGAVGT----IEDLRSLIKEQPDLLVVDLRMKPM 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GL +++LR++ V+ ++S+ E D+ A++ G GYLLKDM PE+++ A+ + AA Sbjct: 63 DGLAMIEQLRKEGCDIPAVLLTMSDSEVDLGNAIRAGVRGYLLKDMAPEEVVDAIRRVAA 122 Query: 126 GEMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE+V++ +T + LR +++ E + LT RER+IL+L+++G NK IA L I+ Sbjct: 123 GELVVAPTMTVKMIDMLRGDQSGQEPKNSLKLLTEREREILQLLSRGESNKAIALTLSIS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK HV+H+L K+ L SRV+AAV +E+ Sbjct: 183 YDTVKQHVRHILNKLNLSSRVKAAVLFAKEQ 213 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 75/214 (35%), Positives = 129/214 (60%), Gaps = 14/214 (6%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I++ DDHP+ R G+ +L+++ D VV +A +G Q +++ + +PD++LLDL MPG++GL Sbjct: 25 IVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLKMPGLDGL 84 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 TL +L+ R++V + S+ + + V A+K G G +LK E L+K++ + AGE+ Sbjct: 85 ATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIRKVHAGEI 144 Query: 129 VLSEAL-------------TPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 L TP +AA +A T ER+ + L+ RER+I+ L+AQG NK Sbjct: 145 WLDSHTTAAVIRQFVANDETPAMAAPSQAP-PTRERERSPLSQREREIVALVAQGFKNKE 203 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 +A ++ I+E TVK H+ ++ K+ + R+E A++ Sbjct: 204 MAEKMFISEQTVKNHLHNIFDKLGVSDRLELALY 237 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 76/239 (31%), Positives = 134/239 (56%), Gaps = 27/239 (11%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ P +LL+DD P+LR G + ++ D+ +VGEAS+G + I +DPD++L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+E + ++++ + + +E L+ GA +LLKD+ P +L+ A+ Sbjct: 61 RMPVLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAV 120 Query: 121 HQAAAGEMVLSEALT-PVLAASLR--------ANRATT----------------ERD--V 153 A+G+ V++ +T +L A +R RA T +RD + Sbjct: 121 RVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLL 180 Query: 154 NQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 LTPRE ++L+ +A+GL N IA R ++E+TVK HV+ +L K+ L+ RV+A V+ ++ Sbjct: 181 EALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYE 239 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 135 bits (341), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 122/200 (61%), Gaps = 10/200 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DDH ++R G+ S PD+ VV + NG + IE + PD+++LDL M GM+G+ Sbjct: 12 ILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMHGMSGV 71 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + LR + + R++V+S E+V ALK GA G+++K+M E LL+A+ + AGE Sbjct: 72 DAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKVHAGE- 130 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + + P +A + ER + QL+PRE D+LKL+A+G NK IA L + E T K Sbjct: 131 ---QYVPPEIAMRM------GERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAK 181 Query: 189 VHVKHMLKKMKLKSRVEAAV 208 +HV ++L K+ + R +A V Sbjct: 182 IHVANILTKLGVSDRTQAIV 201 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 128/204 (62%), Gaps = 8/204 (3%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM- 62 + P +L++DDHP++R+G++ L++ +P I +VGEA NG++ + L S PD++L DL + Sbjct: 10 ESPIRVLIVDDHPVVRSGMRTLLAASPCIEIVGEAGNGDEALALVGSTSPDVVLSDLRLG 69 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 G++G+ +R +++ + +H+ D+V A++ GA GYLLKD P++++ A+ Sbjct: 70 AGLDGVGVTRAVRATHPDVAVLIITTFDHDADIVRAVEAGAAGYLLKDALPDEIIAAIRA 129 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AA GE VLS LT + ++R + L+ RER++L L+ +GL N IA++L I Sbjct: 130 AAVGETVLSAQLTQRVVETMRVGQ-------RPLSEREREVLVLVGEGLSNDEIAKQLFI 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEA 206 + +TVK H++H+ K++ SR A Sbjct: 183 SRATVKTHLRHLFGKLEADSRTGA 206 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 79/224 (35%), Positives = 130/224 (58%), Gaps = 12/224 (5%) Query: 1 MSNQE--PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 MS++E P + L+DD ++R+G+ L+ PD+TVV EA +G + + D++L+ Sbjct: 1 MSSEETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+G+E L + + R+VV + + +E A++ GA G+LLKD PE+LL Sbjct: 61 DVRMPEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLA 120 Query: 119 ALHQAAAGEMVLSEALTPVL----AASLRANRATT------ERDVNQLTPRERDILKLIA 168 A+ G+ V++ + T L A LR+++ + + V LTPRER++L L+A Sbjct: 121 AIRTVHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMA 180 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 QG N IA L ++E+TVK HV +L K+ + RV+A + H+ Sbjct: 181 QGAANLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHR 224 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 126/215 (58%), Gaps = 10/215 (4%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD------PDLILL 58 E ++++DDH ++R G++ + PD+ +V EA++G++ ++L P ++L+ Sbjct: 9 ETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHVVLM 68 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 DL MP ++G+E + ++VV + + E V AL GA GY+LKD EPE++ Sbjct: 69 DLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEEVAT 128 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ A GE+ L A+ +LA + A+ + V LT RERDIL L+ QGL N+ IA Sbjct: 129 AVRAAVKGEVHLDAAVARLLARRM----ASPQVGVTSLTARERDILVLVGQGLSNREIAD 184 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 RL I+E T + HV ++L K++L SR +AA+ +E Sbjct: 185 RLVISERTARTHVSNVLSKLQLSSRTQAALLAIRE 219 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 135 bits (340), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 120/201 (59%), Gaps = 1/201 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD ++R +K LI + D TVVG ASNG++ E + PDLIL+D+ MP M+G+ Sbjct: 3 VLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMDGV 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++E S RI++ + ++ + ALK GA GY+LK + ++++L + G + Sbjct: 63 LATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKGNV 122 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 V + VL + L+ + D+ QLT RE +I+K + +GL N+ I+ L ++E TV+ Sbjct: 123 VFETEIASVLTSMLKEEKEKHHLDL-QLTEREHEIIKWVGEGLSNREISAALYLSEGTVR 181 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 +V +L+K+ ++ R + A++ Sbjct: 182 NYVTQLLEKLNVRDRTQLAIF 202 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 124/211 (58%), Gaps = 6/211 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DD ++R G+K ++ PD+ VVG+A NG+ +EL L PD++L+D+ MP M Sbjct: 8 PIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRMPEM 67 Query: 66 NGLETLDKLREKSLSG-RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G T KL +S +++V S + + + A++ GA GYLLKDM +L A+ Sbjct: 68 DG-RTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRFGH 126 Query: 125 AGEMVLSEALTPVL----AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 +G L L AAS AN+ + +++T RE+++L LI G N+ IA++L Sbjct: 127 SGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQQL 186 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 ITE TVK HV +L ++ LK+R + A++ + Sbjct: 187 YITEGTVKTHVTSILSRLNLKNRSQLAIYAN 217 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 125/208 (60%), Gaps = 10/208 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDH +LR + ++S V + E LA+S PD++LLDL MPG GL Sbjct: 3 LLLVDDHTLLRVALGDMLSQH-GYQVEHAGTEIEALSALAKS-PPDVVLLDLRMPGSGGL 60 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L ++R + +V+ + S+ E D++ AL+ GA+GYL+KD EP +L++ L + AG+ Sbjct: 61 EVLKRIRSRDSELPVVMLTSSDEERDLLQALQAGANGYLVKDAEPAELIQGLEKVLAGQT 120 Query: 129 VLSEALTPVLAASLRANRATTER--------DVNQLTPRERDILKLIAQGLPNKMIARRL 180 ++ LT L + R+ E LTPRER+IL +A+ NK+IAR L Sbjct: 121 AVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPREREILMHVARAESNKVIAREL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAV 208 +++ TVK+H+K +L+K+ +KSRVEAAV Sbjct: 181 GVSDGTVKLHIKSILRKLGVKSRVEAAV 208 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 79/219 (36%), Positives = 124/219 (56%), Gaps = 17/219 (7%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+LIDDH + R G+K+++ D VV E S+G++ + L E PD++++D+NMP +NG+ Sbjct: 39 IVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHVNGV 98 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +L E ++++ S+ + E V+ AL+ GA GYLLK+M+ + L++A+ A G Sbjct: 99 EATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAEGGS 158 Query: 129 VLSEALTPVLAASLR---ANRATTERDVNQ--------LTPRERDILKLIAQGLPNKMIA 177 L +T L R A + NQ LT RE ++L+L+A G NK IA Sbjct: 159 YLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNKGIA 218 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAV------WV 210 L I+E TVK HV ++L+K+ + R +A V WV Sbjct: 219 DALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWV 257 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 73/212 (34%), Positives = 125/212 (58%), Gaps = 8/212 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL+ DD P++ ++ L+ AP +T VG +NG + +E +++PD++L+D+ MP M+G+ Sbjct: 7 ILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDMQMPLMDGV 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ + R++ + E+ +V AL+ GA GYLLKD EP +L A+ GE Sbjct: 67 EATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAIQAVHRGES 126 Query: 129 VLSEALTPVLAASLRANRATT--------ERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 VLS A+ L AS+ +R T D + LT RE +L+L+A+G N IA L Sbjct: 127 VLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQSNPEIAANL 186 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 ++ESTVK ++ ++ K++++ RV+ + Q Sbjct: 187 FVSESTVKANLTRIMAKLEVRDRVQLIIRAAQ 218 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/209 (31%), Positives = 130/209 (62%), Gaps = 3/209 (1%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +++DDH ++R G+ ++IS D+ + G+ +GE+ + ++ +PD+ILLD+NMPG NG+E Sbjct: 9 IVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPGKNGIE 68 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 TL L+ ++V+ +V N ++ ++ ++ GAD Y+LK+ +++ A+ GE Sbjct: 69 TLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVYLGEKY 128 Query: 130 LSEALTPVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNKMIARRLDITEST 186 + ++L + ++++ A +++ LT RE +IL I++GL NK IA +L ++E T Sbjct: 129 IDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLFLSEKT 188 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK ++ + KK++++ RV+A ++ + I Sbjct: 189 VKNYITSIFKKIEVEDRVQATIYAIRNNI 217 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 71/215 (33%), Positives = 128/215 (59%), Gaps = 7/215 (3%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ILL+DDH ++R G+K + + +VGEA+NG GIE + L PD++++D+ MP M+G Sbjct: 5 NILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPEMSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E D + +K ++++ S+ ++E ++ +++ GA GYLLKD++ ++ +KA+ G+ Sbjct: 65 IEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVYNGD 124 Query: 128 MVLSEALTPVLAASLRANRATTE-------RDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + A++ VL + + T+ D +LT RE+ ILK+I G N+ IA L Sbjct: 125 KYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIADGL 184 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 I+ T++ H +++KK+K+K+ VE E+I Sbjct: 185 GISIRTIETHRANIMKKLKVKNAVELVRIAIDEKI 219 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 7/197 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDHPM+ G++ ++ DI VVG S+G + I AE+L PD+IL+DLNMP + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GL + ++E+ R+++ S+ + E + TAL GA GY+LKD++PE++ A+ Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE L AA + ++ T R+ LT RE+ IL +AQG NK +A+ LDI+ Sbjct: 143 GEQYLCTG-----AAGSLSPQSQTSREA--LTGREQTILLELAQGKSNKEVAQALDISVR 195 Query: 186 TVKVHVKHMLKKMKLKS 202 TV+ H K++ +K+ + S Sbjct: 196 TVETHRKNIKRKLGISS 212 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 82/213 (38%), Positives = 121/213 (56%), Gaps = 11/213 (5%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T+ L+DD ++R G + ++ DITV EA++G++ +E A + D+IL+D+ MP M+G Sbjct: 3 TVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMDG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE ++ + RI+V + + E VV A++ GA G+LLKD PEDL+ A+ Sbjct: 63 LEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQS 122 Query: 128 MVLSEALTPVLAASLRANR------ATTERDVNQ-----LTPRERDILKLIAQGLPNKMI 176 V+S A T VL S+R + AT D+N LTPRE++IL LIA G N I Sbjct: 123 AVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTEI 182 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 A L I+ TVK HV +L K + RV A ++ Sbjct: 183 AEELFISLPTVKTHVSKVLSKTGSRDRVHAVLF 215 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/203 (37%), Positives = 124/203 (61%), Gaps = 5/203 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+L DDH + R G+++L+ M D+ V+GEA +G+ +E+ +L PD++L D++MP +G+ Sbjct: 6 IVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPKKDGI 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKR-GADGYLLKDMEPEDLLKALHQAAAGE 127 + + L+ S R V + + ++D +TAL G D Y+LK +LL A+ G Sbjct: 66 QVVKDLKAMGCSPRFVAITAFD-DDDHITALSSVGIDAYVLKASGMAELLSAIRSVYRGH 124 Query: 128 MVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + + L ++ NR ERD +++LTPRE ++L I+QGL N IAR++ ++E T Sbjct: 125 SYVDPKVAGKLLSTF--NRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSEKT 182 Query: 187 VKVHVKHMLKKMKLKSRVEAAVW 209 VK HV H+LKK+ L R +AAV+ Sbjct: 183 VKNHVSHILKKLDLVDRTQAAVF 205 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 76/204 (37%), Positives = 123/204 (60%), Gaps = 5/204 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDH ++R G++ ++ + +I VVGE +NG + + LA L PD++L+DL MP M+G+ Sbjct: 5 VLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMDGV 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++R+ +V + S + V+ A++ GA G+LLK+ E +DL A+ AAAG++ Sbjct: 65 SATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAGQI 124 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +S A L +R QLT RE ++L ++A+G NK IAR L I + TVK Sbjct: 125 HVSPAAISRLMGQVREPSGP-----EQLTERETEVLTMLARGKANKEIARDLRIGQQTVK 179 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 +V H+L K+ + SR +AAV+ Q Sbjct: 180 TYVSHILTKLGVHSRTQAAVYAVQ 203 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 126/211 (59%), Gaps = 8/211 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DD + R+G+ ++ + VVG+A++G + + + + L PD++L+D+ MP ++G+ Sbjct: 36 VLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELDGV 95 Query: 69 ETLDKL----REKSLSG--RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 E ++ R S +G R++V + + ++ A++ GA G+LLKD P L A+ Sbjct: 96 EATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAIRT 155 Query: 123 AAAGEMVLS-EALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG VL+ + L+ +L RA R + + LTP+ER++L +A GL N IARR Sbjct: 156 VHAGNAVLAPDDLSTLLDGRFRARRPSPP-GLEDLTPKEREVLAAVAAGLNNAEIARRAF 214 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 ++ESTVK HV +L+K+ L+ RV+ V H+ Sbjct: 215 VSESTVKTHVGAVLRKLGLRDRVQVVVLAHE 245 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 117/208 (56%), Gaps = 9/208 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ILL DDHP+L + + D+TV+G A +G + +EL PD+ L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M G + + + K RIVV + + +ED+ L+ GA GYLLK EP +LL A+ Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ + + P +AA L A R ++E +L+ RE ++L+LIA+G N+ I+ L Sbjct: 123 RTVHKGQ----KYIPPTIAAKL-AERMSSE----ELSDRELEVLRLIAKGKNNQQISNVL 173 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAV 208 +I ESTV+ H ++ K+ + R +A V Sbjct: 174 NIAESTVRFHTNNIFGKLNVSDRTQALV 201 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 128/212 (60%), Gaps = 6/212 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL +D ++R G+++++ A D+TV+ EA +G + + PD++++D+ MP ++GL Sbjct: 4 ILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLDGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ +I++ ++ + + +V +A++ GA G+LLKD PE+L+ A+ A G+ Sbjct: 64 AATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADGDA 123 Query: 129 VLSEALTPVLAASLRANR-----ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +LS ++T L + A+R T R +++LTPRER IL L+ GL N IA+ L T Sbjct: 124 MLSPSVTRRLLSHF-ADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGAT 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ESTVK HV +L K+ ++RV+ A+ H I Sbjct: 183 ESTVKGHVSRLLMKLDCENRVQLALIAHNAGI 214 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 121/205 (59%), Gaps = 2/205 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDH + R ++ L+ A + VVGEA G++ +ELA L PD++L+DL MPGM+GL Sbjct: 3 VLIADDHALFRDSLRTLLE-ARGVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDGL 61 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + ++VV + S +ED+ A+K GA GY+ KD+ + + L A+ GE Sbjct: 62 AATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGEP 121 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGL-PNKMIARRLDITESTV 187 + L L + ER+ LT RE++IL+L+ QG+ NK +A RL ++E+TV Sbjct: 122 AFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENTV 181 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 K H++++L K+ L++R + + Q Sbjct: 182 KYHLRNILDKLHLQNRTQVVAYALQ 206 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 74/198 (37%), Positives = 119/198 (60%), Gaps = 8/198 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+ +DDHP++ G+ LI PD+T+VG S + PD+ L+DL +P NG+ Sbjct: 13 IMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDLRLPDGNGI 72 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 +T+ + ++ RI++ ++ + ++ ALK GA GY+LK+M PEDLL+ + + +GE Sbjct: 73 DTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVIRKVHSGE- 131 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + L PV+AA+L A+ E LT RE ++L+LI++G NK + RL I+E TVK Sbjct: 132 --KKRLHPVIAATL-ADHFGEE----NLTSRETEVLQLISEGNSNKEVGNRLSISEETVK 184 Query: 189 VHVKHMLKKMKLKSRVEA 206 HVK++L K+ R +A Sbjct: 185 GHVKNILGKLGANDRTQA 202 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 133 bits (334), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 122/201 (60%), Gaps = 3/201 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL++DH ++R G+ + + +VGEA NGE + + PD++L+DL+MP M+G+ Sbjct: 17 LLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKMDGI 76 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ + +I++ S + ++ V+ AL+ GADGY LK+++PE L+ ++ G Sbjct: 77 EATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYEGNA 136 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +TP L L + E + LT RE+++L+ IA+G NK IA L ITE TVK Sbjct: 137 NFHPKVTPAL---LGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQTVK 193 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 HV ++L K+++ R +AA++ Sbjct: 194 THVSNILAKLEVDDRTQAALY 214 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/204 (40%), Positives = 134/204 (65%), Gaps = 7/204 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GMNG 67 IL++DDH + R G++ +++ + VVG AS GE+ +ELA SL PD+IL+D+ + G++G Sbjct: 6 ILIVDDHQLAREGLRAVLA-GDGMEVVGLASTGEEAVELAGSLVPDVILMDVRLGDGIDG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE ++ L ++V+ ++ V AL GA GY+LKD E DL A++Q AG+ Sbjct: 65 LEATRQVVALGLPIKVVMLTLHEMPGYVREALAAGAAGYVLKDTEIGDLRAAINQVMAGQ 124 Query: 128 MVLSEALTPVLAASLRA-NRATTERDVNQ-LTPRERDILKLIAQGLPNKMIARRLDITES 185 L L ++A++RA NR + D++Q LT RE+++++L+A+GL NK IAR+LDI+ + Sbjct: 125 SALPLDL---VSAAMRAENRPEPKGDLSQILTSREQEVVELVAEGLTNKEIARKLDISPA 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TVKVHV+ ++ K+ + R +AAV Sbjct: 182 TVKVHVERLIGKLGVADRTQAAVM 205 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/204 (37%), Positives = 128/204 (62%), Gaps = 3/204 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DD ++R G+ L+ + D+ V G A+NG++ I+ A L P++IL+D+ MP +NG+ Sbjct: 5 ILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELNGV 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E K+++ +I++ + + EE +V +L GA GYL+KD+ P+DL +A+ A AG Sbjct: 65 EATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAGVF 124 Query: 129 VLSEALTPVLAASLRANRATTERDV---NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 L+ + L SL+ RA + LT RE ++LKL+A+G NK IA+ +++E Sbjct: 125 QLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLSEG 184 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TVK HV ++L ++ L+ R +AAV+ Sbjct: 185 TVKNHVSNILMRLGLRDRTQAAVY 208 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 124/208 (59%), Gaps = 3/208 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q IL+ +DH ++R G+K LIS + VVGEA NG IE+ PDLILLDL+MP Sbjct: 3 QSTIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSMP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 MNGL T+ +L+++ +I+V ++ ++ ++ ALK GADGYLLK +P++L A+ Sbjct: 63 KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRAI 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTER--DVNQLTPRERDILKLIAQGLPNKMIARRLD 181 G+ LS L+ L S+ N T E + LT RE+++ +L+A+G N+ IA L Sbjct: 123 MDGKAYLSSDLSGQLIHSV-INPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVW 209 I+ TV H +++KK+ L S E + + Sbjct: 182 ISPKTVDKHRTNLMKKLDLHSAREVSNF 209 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 121/216 (56%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + IL+ DDH ++R G+ L++ PD+ VV EA++G Q +EL +PDL L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +G++ ++R + + +++ + + +ED+ AL+ GA GY+LK E L+ AL Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAG+ + + + ANR QL+PRE +L +A+GL NK IA L Sbjct: 121 RAVAAGQRWIPKEV---------ANRLALRNSFEQLSPREVQVLSELARGLANKEIADVL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +ITE T K H+K +L K+++ R EA Q I Sbjct: 172 NITEHTTKDHLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 132 bits (332), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 82/217 (37%), Positives = 121/217 (55%), Gaps = 34/217 (15%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL+++DH ++R G++Q++S P+ V GEA++GEQ + LA SL PDL+L+DL +P M+G Sbjct: 4 ILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMSGT 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L+ + + R++ + + +E V AL GADGY LK A AG Sbjct: 64 EVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLK-------------ATAG-- 108 Query: 129 VLSEALTPVLAASLRANRATTERDV-----------------NQLTPRERDILKLIAQGL 171 + S L V AS+R A + D+ N L+ RE ++LKLIA GL Sbjct: 109 IASRLLAAV--ASVRDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGL 166 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 N I RRL I TV+VHV +++ K+ + RV+AAV Sbjct: 167 TNAEIGRRLYIASGTVRVHVSNIIAKLGVNDRVQAAV 203 >UniRef50_UPI0001C3195F two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3195F Length = 215 Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 72/210 (34%), Positives = 129/210 (61%), Gaps = 2/210 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T +LIDDH + R+G+++L++ + V G+A G++L E PD+ ++DL++P +G Sbjct: 7 TTVLIDDHTIFRSGLRELLA-EHGLVVEGDAPTVAAGVQLVERCAPDVAIVDLDLPDGSG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + ++ E + ++V +VS ++D+ A+ G GYLLKD E ++ + AAG+ Sbjct: 66 IDAIRRIAECAPGTAVLVLTVSEADDDLTDAVLAGGCGYLLKDAPIETIVAGVTAVAAGD 125 Query: 128 MVLSEALTPVLAASLRAN-RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 VLS + + A +RA+ R T R QL+PRE+++L+L+A G+ N IA+ L I+ T Sbjct: 126 AVLSPRVAATMLARMRASGRQTAARARAQLSPREQEVLRLVAGGMDNAAIAQELFISPHT 185 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ +L K+ + +R++AAV ++ I Sbjct: 186 VKNHISSILTKLHVANRIQAAVRAVRDEIL 215 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 124/209 (59%), Gaps = 6/209 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE----SLDPDLILLDLNMPG 64 ++++DDH M+R G+K + P V+ EA +G + +EL E PD+IL+DL MPG Sbjct: 15 VMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDLMMPG 74 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNG E ++R + +IV+ + ++ VV A++ GA Y+LK + E+L+ AL A Sbjct: 75 MNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYALQGAY 134 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G V++ + L LR + T + D + +T RE+++L LIA+G NK IA L I+ Sbjct: 135 RGMPVMTGEVAQALTRGLR--QRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEELHISI 192 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVK HV ++L K +L+ R + A++ H++ Sbjct: 193 KTVKTHVSNLLMKCELEDRTQLAIYAHRQ 221 >UniRef50_B5JLS2 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLS2_9BACT Length = 209 Score = 132 bits (332), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 120/205 (58%), Gaps = 9/205 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + P T+L++DDHP R G++ ++S AP++ VV EA++ ++ ++L + PD+ LLDLN+ Sbjct: 2 ENPITLLVVDDHPAFRAGLRSMLSEAPNLEVVAEAASVQETLDLHQQHAPDVTLLDLNLK 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +G++ + +L R++V S + ED+ A K GA YLLKD ++++A+ Sbjct: 62 KESGIDAITQLLAIKADTRVIVLSTFDMSEDIHLAFKAGARAYLLKDSSRSEIIQAIEAV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AGE V+ A+ R +R LT +E +IL+L+ QG NK IA L IT Sbjct: 122 YAGERVIPPAIK---------QRLLEQRSRPALTAKELEILELVVQGRRNKEIAADLGIT 172 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAV 208 E TVK H+K + K+++ R EAA+ Sbjct: 173 EFTVKGHLKTVFLKLQVSDRTEAAI 197 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 70/224 (31%), Positives = 131/224 (58%), Gaps = 20/224 (8%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD +L +K +I + D+ VV +SNGE+ +E++E L PD+IL+D+ MP M+G+ Sbjct: 6 VMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPKMDGV 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E KL+EK +I++ + +H+E +V AL GA GYLLKD++ + L+ ++ A ++ Sbjct: 66 ECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAYNDKL 125 Query: 129 VLSEALTPVLAASL-----------------RANRATTERDVN---QLTPRERDILKLIA 168 ++ ++ L + +R +++++N +LT RE +I +L+ Sbjct: 126 LIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIAQLMV 185 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 GL NK IA +L IT+ TVK ++ ++ K+ +K R A +++ + Sbjct: 186 AGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQK 229 >UniRef50_C5C3G8 Two component transcriptional regulator, LuxR family n=6 Tax=Actinomycetales RepID=C5C3G8_BEUC1 Length = 208 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 71/209 (33%), Positives = 119/209 (56%), Gaps = 7/209 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +++++DDH ++R G+ ++ A D+ VV EA + + P++ L+DL +P Sbjct: 2 PTSVMIVDDHEVVRRGIADMVDAAGDLRVVAEAGSVADAVRRGTLTRPEVALVDLQLPDG 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 G+E + +L ++S R VV + + ++ + +A++ GA Y+LK + +++ + AA Sbjct: 62 TGIEVIRRLADESSDTRCVVLTSFDDDDALASAIEVGARAYVLKTVRGAEIVDVVRAVAA 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G ++L E SL RA E + LTP ER +L+L+A+GL N+ IA RL + E Sbjct: 122 GRVLLDE-------RSLTRRRAAHEDPTSALTPSERRVLELVAEGLTNRDIAERLGVAEK 174 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK HV ML KM L+ R +A WV +R Sbjct: 175 TVKNHVTSMLSKMGLQRRTQAVAWVAGQR 203 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/205 (35%), Positives = 120/205 (58%), Gaps = 7/205 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP++R G+K + + D+ VVGEA +GE+ + + +L PDL+LLDL + +GL Sbjct: 5 LLIVDDHPIVREGLKAFLGLYADLEVVGEADSGEEALSKSRALSPDLVLLDLQLSDGHGL 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 L + ++++ + E+ + AL GA GYL+K P LL+ + A GE+ Sbjct: 65 SFLPRFLSLPNPPKVLILTSFLEEDRLRQALSLGASGYLVKHAGPVALLEGIRAAGRGEV 124 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L A +LA R A+ LTP+ER++L +A+G+ NK IA+ L ++E T+K Sbjct: 125 PLDPAAVRLLARPARNPLAS-------LTPKEREVLTHLARGMSNKAIAQALGVSEKTIK 177 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQE 213 HV +L K+ LK R +AA+ ++ Sbjct: 178 THVSSLLAKLNLKGRTQAALLAREQ 202 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 7/212 (3%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +++P +LL++DH ++R G+K S+ D V+GEA NG+Q I+LA L P+++L+D+ + Sbjct: 2 SEQPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDIEL 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ K++ R++ S + VV L GADGY LK ++ + LL + Sbjct: 62 PILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVIRL 121 Query: 123 AAAGEMVLSEALTPVLAASLR-ANRATTERDVNQLTP------RERDILKLIAQGLPNKM 175 G L + LA+ L+ AN TT Q P RER++L+LI++G N+ Sbjct: 122 IQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSNQE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAA 207 IA +L ++ T+K +V+ +L K+ + RV+AA Sbjct: 182 IANQLYLSLGTIKSYVRMILNKLSVDDRVQAA 213 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/207 (32%), Positives = 119/207 (57%), Gaps = 4/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDHP+ R GV +++ PD V+ EA +GE+ +++A +L PDL+L+D+ MP +NG+ Sbjct: 6 VLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLNGI 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E K+ K I++ ++ + V +A++ GA GY+LKD E ED+L+A+ A GE+ Sbjct: 66 EATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKGEV 125 Query: 129 VLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIARRLDITE 184 + S + + T + +LT RE ++L L+++G N +A L ++ Sbjct: 126 LFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGLSN 185 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVH 211 TV +V ++L K+++ R E+ H Sbjct: 186 KTVYNYVANILNKLQVSDRQESRGRFH 212 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/202 (36%), Positives = 123/202 (60%), Gaps = 6/202 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIE-LAESLDPDLILLDLNMPGMNG 67 I+L+DDH ++R G+K L+S V+ + +NG + +E L E+ PDLI++DL MP +NG Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +++ K +++V S EE V+ + GADGY +KD EP+ L+ + Q AAGE Sbjct: 66 IEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAGE 125 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + + V + + N A N L+ RE ++LK +++GL NK IA +L ++E TV Sbjct: 126 QIFHPDVMKVRKSGM--NLAHLR---NPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVW 209 K HV H+ K+++ R +A+++ Sbjct: 181 KTHVSHIFAKLEVGDRTQASMY 202 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/197 (39%), Positives = 122/197 (61%), Gaps = 7/197 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++L+DDH ++R G+ L+ + VVGEA GE + L E+ PDL++LDLNMPG++GL Sbjct: 7 VVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMPGIDGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ETL ++R K L+ R++V S+ + V AL GADGYLLKD ++L A+ G+ Sbjct: 67 ETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGADGYLLKDSMDDELFFAIESVLRGQR 126 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L+ A+ A L+ +R R V+ LT RER++L+LIA GL +A L+I+ T Sbjct: 127 YLAAAIDR---ARLQESRM---RPVS-LTAREREVLQLIANGLTTSAVAEALNISPHTAT 179 Query: 189 VHVKHMLKKMKLKSRVE 205 H ++++K+ + ++VE Sbjct: 180 RHRANLMQKLNVHNQVE 196 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 18/208 (8%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+L+DDH ++R G++ L+ PD+ VVGEAS+GE+ ++ L PD++L+D+ MP M GL Sbjct: 4 IVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMTGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +R ++ R+V+ + + + VV AL+ G G+LLKD+ + L A+ + A GE Sbjct: 64 EALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANGET 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQ----------LTPRERDILKLIAQGLPNKMIAR 178 +L + R R TE V Q LT RE ++++LIA+GL N+ IA Sbjct: 124 LLPPGVAE------RVQRGFTE--VPQEFPHAELPEGLTRRELEVMRLIARGLSNREIAT 175 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEA 206 L E TVK ++L K+ ++ R A Sbjct: 176 VLGTAEGTVKNQTSNILAKLGVRDRTRA 203 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/221 (33%), Positives = 120/221 (54%), Gaps = 16/221 (7%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + L+DDHP R G++++I P+ VVGEA++GE+ I + + PDL+L+D+NMPGM GL Sbjct: 10 VFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMGGL 69 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +L+ S +IV+ +VS+ + A+KRGA GYL K++ P + L E Sbjct: 70 EATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDDEA 129 Query: 129 VLSE----------------ALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLP 172 +S+ + P S + LT RE+DIL+ + G Sbjct: 130 PMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTGES 189 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 NK IA ++E TVK H+K++L+K+ L +RV+ + +++ Sbjct: 190 NKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQ 230 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/199 (34%), Positives = 118/199 (59%), Gaps = 9/199 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP++R G+ ++S P + ++ AS G + + + E D++LLDL MPG+NG+ Sbjct: 11 VLIVDDHPVVRAGLTSMLSTKPQLHMLPAASGGAEALTVLEEEQVDVVLLDLKMPGINGI 70 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L +L + R ++ S +ED+ A++ GA GYL+KD E++L+A+ AG + Sbjct: 71 EVLHRLNNRGALPRTIILSSYEMDEDIYRAIQAGARGYLIKDTTQEEILEAIAAVHAGSL 130 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L + A R + +LT RE +IL+++A+GL NK I R I+E+T + Sbjct: 131 HLPRHI---------AQRISERIGRQELTRRETEILEMLAKGLTNKEIGRVFGISENTAR 181 Query: 189 VHVKHMLKKMKLKSRVEAA 207 HV +++K+++ R EAA Sbjct: 182 NHVNSIIQKLEVSDRTEAA 200 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/222 (33%), Positives = 128/222 (57%), Gaps = 8/222 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P + L DDHP+LRTG++ +S DI +GEAS+G + +E + PD+ L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG++G+ + LR++ +++ S + + + A++ GADGY+LK ++ +L + Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQ-------LTPRERDILKLIAQGLPN 173 + GE +S L LA A+ E ++ LT RE+ IL +AQG N Sbjct: 121 RAFSCGEHPMSPYLMD-LAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGN 179 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 K I+ L I+ TVK H+K++ KK+++KSR+EA + ++++ Sbjct: 180 KEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKL 221 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 121/195 (62%), Gaps = 7/195 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I ++DDHP+ R G+ +SM D +VG+A+NG++ +E +L PD++L+D++MP MNG+ Sbjct: 3 IFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNGM 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + ++K +I++ S+ + +E V++ L RG GY LKD+ ++ AL G + Sbjct: 63 DAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGGI 122 Query: 129 VLSEALTPVLAASLRANRATTERDVNQ-LTPRERDILKLIAQGLPNKMIARRLDITESTV 187 S A++ +L S + E D N LT RE+ +L+L+A GL NK +AR LDI+ T+ Sbjct: 123 YYSRAISDLLVQS------SQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 188 KVHVKHMLKKMKLKS 202 + H +++ K+ +K+ Sbjct: 177 ETHRRNIKDKLAIKT 191 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/217 (35%), Positives = 128/217 (58%), Gaps = 6/217 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE----SLDPDLI 56 M+ ++++DDH M+RTG++ + + P VV EA +G+ I + E S PD+I Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+DL MPGM+G+ET +L + + +I++ + ++ V A++ GA Y+LK + E+L Sbjct: 61 LMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMI 176 + ALH A G V++ ++ L LR + T + +LT RE+++L LIA+G NK I Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLR--QRTAQSGDEELTEREKEVLLLIAEGRSNKEI 178 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 L I+ TVK HV ++L K +L+ R + AV H++ Sbjct: 179 GEELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRK 215 >UniRef50_P96686 Transcriptional regulatory protein ydfI n=5 Tax=Firmicutes RepID=YDFI_BACSU Length = 213 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 75/208 (36%), Positives = 120/208 (57%), Gaps = 2/208 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH ++R G+K LI T++GEA NG+ + LA+ L+PD+IL+DL MP M+GL Sbjct: 4 VLIVDDHLVVREGLKLLIETNDQYTIIGEAENGKVAVRLADELEPDIILMDLYMPEMSGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + +++EK I++ + N + ++ ++ GA GYLLKD E L + A G + Sbjct: 64 EAIKQIKEKH-DTPIIILTTYNEDHLMIEGIELGAKGYLLKDTSSETLFHTMDAAIRGNV 122 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +L + L ++ R +R+ QLT +E +LK IA+GL +K IA L ++E TVK Sbjct: 123 LLQPDILKRL-QEIQFERMKKQRNETQLTEKEVIVLKAIAKGLKSKAIAFDLGVSERTVK 181 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + + K+ SR EA Q+ I Sbjct: 182 SRLTSIYNKLGANSRTEAVTIAMQKGIL 209 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 69/209 (33%), Positives = 127/209 (60%), Gaps = 4/209 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++++DDH M R GV+ I + DI VGE ++ + ++ + +PD++LLD+++PG G Sbjct: 6 VVVVDDHDMFRAGVRSEIGASVDI--VGEGADVDSAVKAIVAAEPDVVLLDVHLPGGGGT 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + ++ ++ + + SVS+ EDV+ ++ GA GY+ K++ +L+ A+ + A G+ Sbjct: 64 EVMKQVHQRHPEVKFLALSVSDAAEDVIGVIRAGARGYVTKNISGTELVDAIGRVADGDA 123 Query: 129 VLSEALTPVL--AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 V S L + A S + A+ + D+++L+ RER++L+LIA+G K +AR L I+ T Sbjct: 124 VFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEVARELFISVKT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 V+ HV +L+K++L +R E W R+ Sbjct: 184 VETHVSSVLRKLQLSNRHELTRWATDRRL 212 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 118/207 (57%), Gaps = 1/207 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LLIDDH M+R G+ + PDI V+GEAS+G +G+ LA L PD+IL+DL M GM+G+ Sbjct: 4 VLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMDGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ + +I+V + ++ V ++ GA YLLK + ++ A+ A+ GE Sbjct: 64 EATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKGEP 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L + + + LR + LT RE +IL LIA+G NK I L IT TVK Sbjct: 124 KLESKVAGKVLSRLR-HSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFITIKTVK 182 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERI 215 H+ ++L K+ + R +AAV+ H+ + Sbjct: 183 THITNILSKLDVSDRTQAAVYAHRNHL 209 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 68/205 (33%), Positives = 121/205 (59%), Gaps = 3/205 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH + RTGV +S+ DI VVGEA +G + +E + +D D+ L+D+ MP M G+ Sbjct: 7 VLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMPRMGGV 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE- 127 E + K+ E ++ ++ + + D+V K G G++LK ++L+ A+ + G+ Sbjct: 67 ELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTVSGGDN 126 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 V S A +L + + + ER +++L+ RE ++L +AQGL + IA RL +++ TV Sbjct: 127 YVDSRAAGKLL--NCFSEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLSDKTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 K H+ H+L K+K+ R +A W + Sbjct: 185 KNHISHILAKLKVSDRTQAVAWAWR 209 >UniRef50_B4DBM9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DBM9_9BACT Length = 209 Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 77/205 (37%), Positives = 117/205 (57%), Gaps = 12/205 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL++DDH + R G+ +S PDI +V EA+NG Q +E+ PDL+L+D+ +P +G+ Sbjct: 9 ILIVDDHFIARKGLIGSLSAEPDIEIVAEANNGFQAVEMFVLHRPDLVLMDVRLPLQDGV 68 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +R RI + +VS+ EED++ A+ G GYL K +E E LL A+H+ A G Sbjct: 69 QAARTIRNDHPQARIAMLTVSDAEEDILGAIDAGVVGYLPKSVEREQLLTAIHRLAEG-- 126 Query: 129 VLSEALTPVLAASLRA-NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 E P + A LR+ NR + LT RE ++L I +G NK I L I E TV Sbjct: 127 --GEYFAPEIEAKLRSTNRVS-------LTKRETEVLTQIVKGRSNKEIGYDLGIAEPTV 177 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 ++H+ H+ KK+ + R +AA+ Q Sbjct: 178 RLHLTHLFKKLHVMDRTQAAMVAVQ 202 >UniRef50_D0CQV3 Transcriptional regulatory protein DegU n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQV3_9RHOB Length = 213 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 79/207 (38%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 TI+L DDHP+ R G+++ + + + V+ + E+ + L PDL++LDL+MPG G Sbjct: 4 TIVLADDHPIFRDGLRKTLDDSGEFKVLAAGCDAEEAVRLTREHRPDLVILDLSMPG-GG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L ++ + RI + +VS DV AL+ GA GY+LK + L K+L A GE Sbjct: 63 LGATRQIAALGDAPRIAILTVSEDSNDVADALEAGATGYILKGVTASALTKSLRSIAKGE 122 Query: 128 MVLSEALTP-VLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 +S L VL A + N T +R V LT RE +IL+ +A+GL NK IA L I E Sbjct: 123 GFVSPGLASRVLLAIQKGNTPTGDRGVLGDLTHREEEILRRVAKGLSNKEIAAELSIQEK 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK ++ +L K+ ++RVEAA+ H+ Sbjct: 183 TVKHYMTSILSKLHARNRVEAALIAHE 209 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 71/197 (36%), Positives = 115/197 (58%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L+ DDH ++R G++ ++ P I VVGEASNG ++LA PD+++LD+ MP Sbjct: 10 PIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDITMPEE 69 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GL+ +LRE R+++ S+ + E V ++ G GYLLKD E+L A+ A Sbjct: 70 SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAVHA 129 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G S A+ L ++ + ++ LTPRERD+L +A+GL NK IA L I+ Sbjct: 130 GGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGISRR 189 Query: 186 TVKVHVKHMLKKMKLKS 202 TV+ H + +++K+++ S Sbjct: 190 TVEAHRESLMRKLQIHS 206 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 76/225 (33%), Positives = 131/225 (58%), Gaps = 21/225 (9%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DD ++RTG+ ++ PD+T V +A +GE+ + L + DPD++L+D+ MP M+GL Sbjct: 13 VLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMDGL 72 Query: 69 ETLDKL-REKSLSGR----IVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +++ R +GR ++V + + E V++A++ GA G+LLKD +P+ L+ A+ Sbjct: 73 VATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVRAV 132 Query: 124 AAGEMVLSEALTPVL----------------AASLRANRATTERDVNQLTPRERDILKLI 167 G+ ++ A T VL AA+ A + QL+ RERD+L + Sbjct: 133 HRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLVWM 192 Query: 168 AQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 A+GL N+ +A +L ++E+TVK HV +L K+ L SRV+A V ++ Sbjct: 193 ARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYE 237 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 77/218 (35%), Positives = 121/218 (55%), Gaps = 12/218 (5%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P +L+ DD ++R G + L+ PD+TVV EA++G + + L PD++L+D+ MP Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPV 83 Query: 65 MNGLETL-----DKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MNGLE D +R I+V + + +E V AL+ GA G++LKD +PE+LL A Sbjct: 84 MNGLEATRLIAADAVRPGP---GILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRATTERDV----NQLTPRERDILKLIAQGLPNKM 175 + AAG+ +L+ +T L A+ A + + LT RER +L IA G N Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 IA+ L ++ STVK HV H+L K+ + R + + ++ Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYES 238 >UniRef50_D2RAN9 Response regulator receiver domain protein n=17 Tax=Actinobacteridae RepID=D2RAN9_GARVA Length = 261 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 80/252 (31%), Positives = 129/252 (51%), Gaps = 40/252 (15%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N E + + DD ++R G +I+ D+ VV + SNG Q +EL++S +PD+IL+D+ Sbjct: 4 MENNEVIRVAIADDQELVRAGFAMVINSQQDMHVVSQTSNGSQIVELSKSQNPDIILMDV 63 Query: 61 NMPGMNGLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP M+GLE K+ ++ + +I++ + + +E V+ A+ GA G+LLKD EPE LL Sbjct: 64 RMPVMDGLEATRKILQQKTNENTKIIILTTFDLDEYVMAAIHAGASGFLLKDTEPETLLN 123 Query: 119 ALHQAAAGEMVLSEALTPVL--------------------------------------AA 140 ++ G +++ T L AA Sbjct: 124 SIRTVYQGNAIIAPTATKRLIENMIQQGKVATNTTENSAANYTANYAAQESYDVQANPAA 183 Query: 141 SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKL 200 + A T + +LT RER++L IA GL N+ IA +L I+ TVK HV H+L K+ Sbjct: 184 QATQSCAYTNSAITELTDREREVLVEIAHGLSNQEIADKLFISLPTVKTHVAHILGKIGA 243 Query: 201 KSRVEAAVWVHQ 212 + RV+A V+ ++ Sbjct: 244 RDRVQAVVFAYE 255 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 65/207 (31%), Positives = 121/207 (58%), Gaps = 3/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD P++R+ ++ +++ D+ + GEA GE+ + L L PD++L+DL MPGM G+ Sbjct: 5 VLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMGGI 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ S R++V + + ++ V AL+ GA G+L+K+M +D+L A+ A G Sbjct: 65 EATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHGNG 124 Query: 129 VLSEALTPVL---AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 +L+ ++T L R R ++ +T RER++L L+ +GL N IA L ++ + Sbjct: 125 LLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLSHA 184 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK ++ +L K+ + RV + ++ Sbjct: 185 TVKTYITRLLSKLGARDRVHLVIAAYE 211 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 73/208 (35%), Positives = 121/208 (58%), Gaps = 4/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD ++RTG++ ++ P I VVG A +G + +ELA L PD+ L+D+ MP M+G+ Sbjct: 25 VVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMDGI 84 Query: 69 ETLDKLREKSLSG--RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 + L ++ +VV + + +E V AL+ GA G+LLKD P+ L +A+H AA G Sbjct: 85 QATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAACG 144 Query: 127 EMVLSEALTPVLAASLRAN--RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + +++ +T L A+ + + V LT RE +L +A G N IA L I+ Sbjct: 145 DALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHISL 204 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 STVK H+ ++ K+ ++RVE A+W +Q Sbjct: 205 STVKTHIASLMAKLGARNRVEIALWAYQ 232 >UniRef50_D2S9C3 Two component transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9C3_9ACTO Length = 215 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 128/204 (62%), Gaps = 5/204 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDH ++R G+ L++ A + VG +G+ +EL E LDPD++LLDL+MPG +G+ Sbjct: 4 VLVVDDHAVVRRGISSLLAAADGLECVGAVGDGDTALELVEQLDPDVLLLDLSMPGRDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + LRE+ ++V + + VV AL GADGYLLK + E +L A+ AAG Sbjct: 64 TVIRVLRERGHRTPVLVLTSFGEPDLVVPALVAGADGYLLKYQDGESILDAVRCIAAGGA 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + +T + A LR +R + LT RE+++L+L+ QGLPNK+IARRL I+E+TVK Sbjct: 124 PVDPMVTAAVLADLR-DRGQG----DLLTDREKEVLELVRQGLPNKVIARRLRISEATVK 178 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 HV +L+++ R +AA+W + Sbjct: 179 THVTRILQRIGATDRTQAALWAER 202 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 74/194 (38%), Positives = 119/194 (61%), Gaps = 2/194 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL DDH +LR GVK L++ D+ VV EA NGE+ + +A + PD+ ++D+ MP M+G+ Sbjct: 5 ILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMDGI 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ E S R+V S+ V LK GA G+LLKD +L++A+ + GE+ Sbjct: 65 EATRRIVEDG-SSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDGEI 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L +++ ++ A L + D+ LTPRE++IL L+A+G N+ +A RL ++ TV Sbjct: 124 YLGPSISHIV-AKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKTVG 182 Query: 189 VHVKHMLKKMKLKS 202 H +H++ K+KLK+ Sbjct: 183 THRQHIMNKLKLKN 196 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 119/203 (58%), Gaps = 2/203 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ++++DDH ++R G + ++ PD VVGEAS+G + IEL L PD++++DL MPG+ Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GLE +++E+ ++V + E ++ ALK GA GY+LK ++ AL + + Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 126 GEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE L++ L L L R +LT RER++L L+A+G N IAR L I+ Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 184 ESTVKVHVKHMLKKMKLKSRVEA 206 T K HV+++++K+ + R +A Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQA 212 >UniRef50_D2R8T9 Two component transcriptional regulator, LuxR family n=4 Tax=Planctomycetales RepID=D2R8T9_9PLAN Length = 210 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 72/202 (35%), Positives = 126/202 (62%), Gaps = 2/202 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++L+ DDH ++R GV ++ + D+ V+ EA++G Q IE A L PD++LLD+ +P +G Sbjct: 4 SLLVADDHEVVRAGVAAML-LGSDVKVIAEATSGNQAIEQAMKLRPDVVLLDVRLPETDG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE L+++ ++S ++V+F+ ++ + A+ GA G+L+K D+L A+ +A G Sbjct: 63 LEALERILDRSPQTKVVMFTAYDNPTYIARAVALGAAGFLMKGSTKADVLSAITRAHTGL 122 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +E+L + ++ R T + ++ LT RE +L+ +A GL N+ I R LDI+ TV Sbjct: 123 PPENESLMGRVRNTMARRRPTYDEEI-PLTNREVQVLRHVALGLSNREIGRSLDISIETV 181 Query: 188 KVHVKHMLKKMKLKSRVEAAVW 209 K HV+++L+K++ R EAAVW Sbjct: 182 KEHVQNILRKLEAGDRTEAAVW 203 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 118/205 (57%), Gaps = 1/205 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL DD + R G+ L+ + D++VVG+A +G I L ++L PD+IL+D+ MP +G+ Sbjct: 4 LLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ ++ RI+V + + +E + T+L+ GA GYLLK L A+ G Sbjct: 64 EATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDGHF 123 Query: 129 VLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L + P + A LR E++ + +L+ RE D+L LI QG N+ I++ L +TE TV Sbjct: 124 QLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEGTV 183 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 K +V +L + ++ R +AA+W Q Sbjct: 184 KNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 129 bits (325), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 79/214 (36%), Positives = 131/214 (61%), Gaps = 9/214 (4%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +P IL++DDH + R G+K +++ + +VVGEA++G I L E+L PD++L+D+ + Sbjct: 2 TADPLRILIVDDHALAREGLKAVLT-SSGFSVVGEAADGPAAIALTEALCPDVVLMDVRL 60 Query: 63 PG-MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 G M+GLE ++ L+ R+++ ++ + V AL GA GY+LKD +DL A+ Sbjct: 61 KGDMDGLEATRRIAALGLAARVLMLTLHDLPAYVREALAAGAAGYVLKDTAIDDLQAAIV 120 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIAR 178 + A G+ L L ++A++RA ERD ++ LT RER+I+ LIA+G+ NK I R Sbjct: 121 RVAQGQTALPLDL---VSAAMRAPE-PVERDPTALSSLTGREREIVHLIAEGMTNKEIGR 176 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L I+ +TVK HV+ ++ K+ + R +AAV + Sbjct: 177 SLGISPATVKAHVERLIAKLGVTDRTQAAVLASR 210 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 79/218 (36%), Positives = 126/218 (57%), Gaps = 7/218 (3%) Query: 1 MSNQEPATI--LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M+ EP T+ L++DD P++R G+ ++ APDI VV +A +G Q + L + PD++L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+GL + LR + + ++V + + ++ V+ AL+ GA G+LLKD P++++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 ALHQAAAGEMVLSEALTPVLAA----SLRANRATTERD-VNQLTPRERDILKLIAQGLPN 173 A+ Q A G VLS +T L A S R T D + L RER++ + QG N Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 I L ++ TVK HV +L K+ L +RV+ A+ VH Sbjct: 181 AEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALLVH 218 >UniRef50_D1Y4N4 Two component transcriptional regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4N4_9BACT Length = 215 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 10/202 (4%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +I+L DDHP+ R G+ LI+ + ++GEAS+G+Q E+ E L PD+ LLD+ MP M+G Sbjct: 3 SIVLADDHPLTRAGLAALINEEEGLNLLGEASDGKQAWEMIEKLRPDVALLDIRMPEMDG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + K+++ L ++++ + N + +V AL GA G+++K +L +AL G Sbjct: 63 ITVARKVKDAKLPTKVIMLTAYNAQPYIVAALSAGARGFIVKTSAVMELTQALQSVIGGG 122 Query: 128 MVLSEALTPVLAASLRANRA-TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L A+ AN + ++ QL+PRER++L L +QG P K +A +L ITE T Sbjct: 123 IYLDSAI---------ANSVDSASNELEQLSPREREVLLLSSQGFPVKEVAAKLFITERT 173 Query: 187 VKVHVKHMLKKMKLKSRVEAAV 208 V+ H+ + K K++ EA + Sbjct: 174 VQAHLSSVYAKFGAKNKTEALI 195 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 129 bits (323), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 76/210 (36%), Positives = 126/210 (60%), Gaps = 6/210 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 T+L++DD P++R G++ ++ P + VVGEA +G + A L PD+ L+D+ MPGM+G Sbjct: 11 TVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTLMDVQMPGMDG 70 Query: 68 LE-TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 +E T + +VV ++ + +E V AL+ GA G +LKD +L+ A+H AAAG Sbjct: 71 VEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSELVAAIHAAAAG 130 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIARRLDI 182 + +LS ++T L A R T + +LT RERD+ +L+ QGL A RL + Sbjct: 131 DSLLSPSVTRRLIEEF-ARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAEAAERLTL 189 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 +STVK HV+ + +K+ ++ RV+A ++ ++ Sbjct: 190 GDSTVKSHVQSLYRKLGVRDRVQAVIYAYE 219 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 70/205 (34%), Positives = 121/205 (59%), Gaps = 3/205 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E ++LIDDH + R G+K+L+ M PD ++ GEAS+G +G+ L + PD++LLD+ MP Sbjct: 2 EKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPN 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G+ + +LR + + V + N E + G G++LK +LL A+ A Sbjct: 62 LDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G+ + + +L + ++ E D + LT RE+++L +AQGL N I+ +++++ Sbjct: 122 RGQCYVDPKVAGLLLGAF--HKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLS 179 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAV 208 E TVK HV H+LKK+ L+ R +AA+ Sbjct: 180 EKTVKNHVSHILKKLDLRDRTQAAI 204 >UniRef50_C6P480 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P480_9PROT Length = 216 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 83/214 (38%), Positives = 128/214 (59%), Gaps = 8/214 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MSN P ILL DDHP+ R GV +S+ PD VV +A +GE+ +E+A L PD++LLD+ Sbjct: 1 MSN--PIRILLADDHPLFREGVAHSLSVEPDFEVVAQAGSGEEAVEMAHRLHPDIVLLDV 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +M GM G+ K+ ++ RI++ +VS + E+++ ALK GA GY+LK + +L Sbjct: 59 SMAGMGGIAAAGKIAAEAPVVRIMMLTVSENRENLMAALKAGAHGYVLKGVSASELRSIT 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIAR 178 + A GE +TP LAA + + ++LT RE IL+L++QGL N+ I Sbjct: 119 RRVAGGEAY----VTPALAADMLTEFSNPHPIDSFSELTARETTILELLSQGLTNREIGE 174 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 R + E TVK ++ +L+K+ ++SR EAA+ Q Sbjct: 175 RTYLAEKTVKHYMTSILQKLHVRSRTEAALIAMQ 208 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 129 bits (323), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 74/210 (35%), Positives = 125/210 (59%), Gaps = 6/210 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DDH ++R G+ QL AP I VVGEA NGE+ + ++ DL+LLDL+MPG NG Sbjct: 5 LIVTDDHELVRAGLLQLFEGAPGIEVVGEAVNGEELMRKLQATQVDLVLLDLDMPGENGA 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++++R I++ S + + V A++ GA GY+ KD P+ LL+A+H+ A Sbjct: 65 NLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGASGYICKDCSPKTLLEAIHKVVAT-- 122 Query: 129 VLSEALTPVLAASLRANRATTERD--VNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L+P++A L A + + + L+ RE++I +L+ +GL N I+R+L I++ T Sbjct: 123 --GKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISDRT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V H ++L K+ LK+ VE + Q ++F Sbjct: 181 VSAHKINLLNKLGLKNVVELVHYSIQHQLF 210 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 121/207 (58%), Gaps = 2/207 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ILL DDH M R G+++L+ +VGEAS G + + A +L PD++LLD+ MP + Sbjct: 5 PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDIQMPEI 64 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ +L + ++++ ++ ++ + A+K GA YLLKD + ++L+ + + Sbjct: 65 DGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVIERVHR 124 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE L +T + R R + ++D QLT RERDIL L+A+G N+ IA+RL ++E Sbjct: 125 GEAALDPTVTLRVFDEFR--RLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFLSEK 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TV + + +K+ + +R +AA+ Q Sbjct: 183 TVGNRLSEIFQKLGVSNRTQAALVAVQ 209 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 66/204 (32%), Positives = 116/204 (56%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD ++R G+ ++ + DI V+GEAS GE+ + +A+ L PD++ +D+ MPG +GL Sbjct: 7 VVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGDGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ + ++V + + +E V AL+ GA G LLKD DL++ + +AA GE Sbjct: 67 EATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALGEG 126 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 ++ +LT + A ++ LTPRE D + + QG+ N IA L + STVK Sbjct: 127 LVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPSTVK 186 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 H+ + K +RV+ +W + Sbjct: 187 THLSSAMAKTGTHNRVQLVIWAFR 210 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/202 (37%), Positives = 122/202 (60%), Gaps = 7/202 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDH ++R G++ + + I VVGEA+NGE+ ++ AE L P+++++DL MP M+G+ Sbjct: 16 VLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMMPVMDGI 75 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 +LR + ++ + + E V A++ GA Y+LKD + L A+H AA GE+ Sbjct: 76 TATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHAAARGEV 135 Query: 129 VLSEALTPVLAASL-RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L P A L R R+ R+ LTP+E +L+L+A+G NK IA ++E+TV Sbjct: 136 RLH----PEAARRLVRDFRSPEMRE--SLTPKETAVLQLLARGQSNKDIAAEQGVSEATV 189 Query: 188 KVHVKHMLKKMKLKSRVEAAVW 209 K HV +L K+ L SR +AA++ Sbjct: 190 KTHVSRLLSKLGLDSRTQAALY 211 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 2/211 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +I+L DDH ++R G+K L+ D VVGEAS+G + + L ESL P +++ DL M GM+G Sbjct: 3 SIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMSG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E ++ ++S +V+ S+ +E V AL+ GA Y+LKD E+L++++ +A G Sbjct: 63 IEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQGH 122 Query: 128 MVLSEALT--PVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 LS L+ + A ++ AT+ LT RER++L L+AQG IA RL I+ Sbjct: 123 RYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISPR 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VH +M++K+ L+++ + + Q I Sbjct: 183 TVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 115/208 (55%), Gaps = 9/208 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS +L+ DDH + R G+ +I+ P++ VV +A NGEQ I L E PD+ L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP + G+ + + + S RI+V + + +ED+ L+ GA GYLLK+ EP++LL A+ Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G + + P + A L + E L+ RE ++L+ +AQG+ N IA L Sbjct: 121 RTVHRGH----KYIPPDVGAKLVQRLSNPE-----LSERELEVLRSLAQGMSNADIADAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAV 208 I E TVK HV +L K+ + R +A + Sbjct: 172 SIGEGTVKSHVNRILNKLDVSDRTQAVI 199 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 68/203 (33%), Positives = 126/203 (62%), Gaps = 1/203 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDH +LR G+K L+S D+ VVGEA+ G + + L SL PD+++LD +P + Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +L+E+ +++ + + + V+ A++ GA GY++KD+ DL +++ A Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+ + + L +R+ A E + L ++ I++L+AQG N+ IA R+ ++E Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERI-PLNRQQLAIIRLVAQGYTNREIAERMFLSEK 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAV 208 TVK ++ +++M +K+RVEAA+ Sbjct: 181 TVKGYLAEAMRRMGVKNRVEAAM 203 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 69/197 (35%), Positives = 113/197 (57%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I LIDDHP++R G + +S PD+ VVG+A + S PD++L+DLN+P +G+ Sbjct: 24 IYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLNIPDRDGI 83 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L LR + +++V S + E V AL+ GA GYL+K + E++++ + + A G Sbjct: 84 ELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIRRIATGGA 143 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 LS ++ + ++R + ++ LTPRER +L+L+A G+ + A RL I+ TV+ Sbjct: 144 PLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTISPKTVE 203 Query: 189 VHVKHMLKKMKLKSRVE 205 H + K+ KS VE Sbjct: 204 THRVRIYAKLGCKSAVE 220 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 73/218 (33%), Positives = 128/218 (58%), Gaps = 4/218 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P ++L DD ++R G + ++S I VVGEA +G + +E+A D++L+D+ Sbjct: 16 TGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQ 75 Query: 62 MPGMNGLETLDKLREKSLSG---RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP ++GLE +L + + ++++ + + E+ + AL+ GA G+LLK+ PEDL++ Sbjct: 76 MPKLDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIE 135 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATT-ERDVNQLTPRERDILKLIAQGLPNKMIA 177 ++ A G+ +LS +T + A A T R ++LT RE ++L L+A+G N IA Sbjct: 136 SVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIA 195 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 R+L + E+TVK HV +L K+ L+ R A V+ ++ I Sbjct: 196 RQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGI 233 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 122/212 (57%), Gaps = 5/212 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DD ++R G + +S P+I VVG A G + E +L PD++L+D+ MP +GL Sbjct: 4 VLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGDGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ + R++V + + +E V AL GA G+LLKD +PE+L A+ A G Sbjct: 64 TATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEGGS 123 Query: 129 VLSEALTPVLAASLRANRA---TTERDVNQ--LTPRERDILKLIAQGLPNKMIARRLDIT 183 VLS LT L + +T R + L+ RE D+++L++QGL N IA L + Sbjct: 124 VLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLSLE 183 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +STVK H+ ++ KK+++++RV+ +W ++ + Sbjct: 184 QSTVKSHISNICKKLQVRTRVQIVIWAYRNNV 215 >UniRef50_C0GEE4 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEE4_9FIRM Length = 205 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 122/201 (60%), Gaps = 6/201 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++IDDHP++R G++ + S+ D + G A+NG + +E+ E PD+ L+DL +PG +GL Sbjct: 3 VIIIDDHPLVRKGLELVASLEEDFEICGFAANGLEAMEVLEKHSPDVALVDLRLPGEHGL 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + ++K R + + + +V + +E++ A+ DGY+LK+ PE+L+ ++ G Sbjct: 63 DIIEKARSINSTCKYIVLTSYATKEEIKQAMALEVDGYILKETLPEELITSVRMIHKG-- 120 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + PV+ A E +++LT RE ++LK +++GL NK IA L I+E TVK Sbjct: 121 --RKYFDPVIVQ--HALEEKNEDKLSELTTREMEVLKFLSRGLNNKKIAEDLFISEHTVK 176 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 HV +L K++L+ R +AA++ Sbjct: 177 KHVGQILTKLELQDRTQAALY 197 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 76/207 (36%), Positives = 122/207 (58%), Gaps = 3/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD P++R G+K LI D+ + GEA +G+ + L PD++LLD+ MP ++GL Sbjct: 4 VVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLDGL 63 Query: 69 ETLDKLR-EKSLS-GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 L + + +L+ R+V+ + +E V AL+ GA G++LKD EP DLL+A+ AAG Sbjct: 64 AALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVAAG 123 Query: 127 EMVLSEALT-PVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E +LS +T V+ R A D+ LT RER+++ L+ GL N IA RL I+ + Sbjct: 124 ESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVISPA 183 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 T + HV ++ K+ + R + AV +Q Sbjct: 184 TARTHVSRVMVKLSARDRAQLAVLANQ 210 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 72/217 (33%), Positives = 120/217 (55%), Gaps = 4/217 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++P +L+ DD P++ T + ++ +I VV ASNG++ IE A+ D+ +LD+ M Sbjct: 6 NEQPIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG++ +++ S +I++ + + E+ V AL+ G G+LLKD PE L+ A+++ Sbjct: 66 PYVNGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINR 125 Query: 123 AAAGEMVLSEALTPVLAASLRANR----ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 G VLS +T + R + + + LTPRE ++LK +AQ N IA Sbjct: 126 IYHGASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIAN 185 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L I TVK +V ++ K+ ++ RV AVW H I Sbjct: 186 YLHIGSETVKTYVSRLISKIGVRDRVGLAVWAHTSGI 222 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 11/207 (5%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +LL+DDH ++R+G+ L++ D VV EA + EQ + PD+ L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG +G+E L ++R + R+++ + + +EDV AL+ GA GYLLK + +L A+ Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 HQAAAGEMVLSEAL-TPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 + AGE + ++L T +LR ++L+PRE + L L+A+G N+ I Sbjct: 121 RKVHAGERCVPQSLETRCKNGALR----------SRLSPREVETLDLLARGFSNREIGSA 170 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEA 206 L +TE T K HV+ +L K++ R EA Sbjct: 171 LGVTERTAKAHVQAILVKLEAADRAEA 197 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 70/198 (35%), Positives = 118/198 (59%), Gaps = 9/198 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DDH +LR G+ L++ + V+G+A +G I+L +L PD+++ DL M M+G Sbjct: 8 ILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMDGT 67 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +R + + R+++ + + +E+V L+ GA YLLKD+EP L+ +H AG Sbjct: 68 EVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAGR- 126 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 +A+ P +AA L + A+ + LT R+ ++L+ +A+G N IA L I+E TVK Sbjct: 127 ---KAIDPSIAAKLAEHVAS-----DALTARQLEVLRSLAEGRSNIEIANTLYISEGTVK 178 Query: 189 VHVKHMLKKMKLKSRVEA 206 H+K +L+K+ + R +A Sbjct: 179 AHIKAILQKLGARDRTQA 196 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/207 (34%), Positives = 125/207 (60%), Gaps = 2/207 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DDH +LR G+ +L+S DI VVGEA +G++ +++ PD++L+D+ MP + G+ Sbjct: 6 VLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRLTGV 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +++ + S I++ + + ++ L+ GA GYLLK + ++++ A+ AGE Sbjct: 66 EATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKAGES 125 Query: 129 VL-SEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 VL S A +L + ++ + E V QL+PRE +IL+L ++GL N+ IA +L ++ T Sbjct: 126 VLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLSMRT 185 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK H+ ++ KM+ R EA V +E Sbjct: 186 VKAHLSNIFNKMRCSCRTEAIVKGFRE 212 >UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL n=1 Tax=Rhodospirillum centenum SW RepID=B6IT53_RHOCS Length = 228 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 81/208 (38%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELA-ESLDPDLILLDLNMP 63 E T LID + + R G+K+L+ +P +V EASN +G+ +A + L PDLILLDL Sbjct: 2 ENVTAFLIDANKLFREGLKRLLDESP-FKIVAEASNVREGVTVADQGLKPDLILLDLVNG 60 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G E + +LR+ + R+VV + + AL+ GADGYL+KD+ + L ++L Sbjct: 61 GEEEAEAMRRLRQALPNSRMVVLTTDLCTRRLSNALEAGADGYLMKDLSSDALTQSLRLV 120 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQ--LTPRERDILKLIAQGLPNKMIARRLD 181 GE V L +L + R N E V++ L+ RE IL+ + G NKMIA L+ Sbjct: 121 MMGEKVFPTHLAALLISG-RVNGNGLEMPVSRKGLSQREIQILRCLLNGDSNKMIANHLN 179 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVW 209 ITE+TVKVH+K +L+K+ +R +AA+W Sbjct: 180 ITEATVKVHLKSLLRKINASNRTQAAIW 207 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/216 (31%), Positives = 131/216 (60%), Gaps = 2/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILL 58 M ++E +++ DDH M+ G++ LI + DI V+G A NG +L E LD D+ +L Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D++MP +GLET K+R + + ++++ ++ N+E + + GA GY+LK+ +L+ Sbjct: 61 DVDMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVN 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ AGE S+A+T L S++ ++ +LT RE+++L LI +G+ K I++ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +L I ++TV+ H ++++ K+++K+ E ++V + + Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 73/226 (32%), Positives = 130/226 (57%), Gaps = 22/226 (9%) Query: 3 NQEPAT--------------ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELA 48 +QEP+T +++ DDHP++R G+ ++ + DI VVGEA +G Q ++LA Sbjct: 11 DQEPSTRAGAPSEPERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLA 70 Query: 49 ESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLL 108 +L PD+++ DL MP ++G+ ++ + R+VV + + +++ A++ GA GYLL Sbjct: 71 RTLSPDVVITDLRMPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLL 130 Query: 109 KDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIA 168 KD +L+ + +AA G+ VL+ ++ L + + +RA ++LTPRE ++L+ +A Sbjct: 131 KDTPRAELVAGIREAARGQTVLTPSVATRLVSQV-GSRA------DRLTPREVEVLRAVA 183 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +GL N + L I+E+TVK H+ K+ + R AV V +R Sbjct: 184 RGLSNAAVGHELFISETTVKTHLIRAFGKLGVNDRTH-AVTVATDR 228 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 68/201 (33%), Positives = 121/201 (60%), Gaps = 2/201 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+++DH +LR G++ ++S V GEA +G + +LA SL PDLIL+DL++PGMN Sbjct: 5 CSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDLSLPGMN 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + ++ +S RI+ SV ++E V AL+ G DGY+LKD +DL+ A+ G Sbjct: 65 GIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAMRVVLLG 124 Query: 127 EMVLSEALTPVLAASLRANR--ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + LS L L S + +T + + LT RER +LKL+A+G N+ + ++++ Sbjct: 125 KKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYMNLSP 184 Query: 185 STVKVHVKHMLKKMKLKSRVE 205 T++ + +++K+ + + E Sbjct: 185 KTIEKYRASLMRKLGITNLTE 205 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 12/219 (5%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP--DLILLDLNMPGM 65 ++L++DD ++R G+++L+ + + VVG+A++G + +E + DP D+ L+D MP M Sbjct: 5 SVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALVDARMPRM 64 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ + ++R + +V + + +E V L+ GA GYLLKD+ PE+L+ A+ + A Sbjct: 65 DGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVAAIRRVAR 124 Query: 126 GEMVLSEALTPVLAASLRANRATT----------ERDVNQLTPRERDILKLIAQGLPNKM 175 GE VL +L A+L +T + +L+ RE ++ +L+ G N+ Sbjct: 125 GETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVGTGATNRE 184 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +AR L ITE T K HV +L+K+ L+ R A+WV + R Sbjct: 185 VARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRERR 223 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 114/196 (58%), Gaps = 1/196 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P I+L DDH ++R G++ L+ P +T+VGEA +G + + L + PD+ ++D+ MPG+ Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG + ++ + ++++ S+ E+ V+ AL+ GA GYLLKD +L AL+ Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 126 GEMVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE LS +++ + A R + LTPR R+I++LIA+G K IA L+++ Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 185 STVKVHVKHMLKKMKL 200 T++ H H++ ++ L Sbjct: 184 KTIETHRMHLMARLGL 199 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 75/211 (35%), Positives = 122/211 (57%), Gaps = 6/211 (2%) Query: 2 SNQEPAT-ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 + P+T +L++DDH + R G+ +++ P I VVGEA NG ++ DL+++DL Sbjct: 8 GSSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDL 67 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+E +++ + I++ +V + ++ AL+ G GYLLKD +++ A+ Sbjct: 68 QMPVIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAV 127 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIA 177 Q GE L+ L VL R AT D + LTPRE+ +L+L+ QG N+ IA Sbjct: 128 RQVLRGEAFLNPDL--VLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIA 185 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 R L I+ TVKVHV+H++ K+ + R +AAV Sbjct: 186 RELIISPGTVKVHVEHIIAKLGVSDRTQAAV 216 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 8/206 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG-MNG 67 I+L+DDHP+LR G++ L+ D VVG+ + E+ L +S PD++L+DL + G +G Sbjct: 4 IVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDTDG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + R S S ++VF+ + + D V +L GA GYLLKD P +L A+ A G Sbjct: 64 VALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARDGG 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 LS A+ L +RA + LTPRE ++L L+A G N+ + RL ++E+TV Sbjct: 124 SALSPAVASRLMDRMRAPQ-------ESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQE 213 K HV H+ K+ + +R A +E Sbjct: 177 KTHVNHIFTKLGVDTRAAAVSRAMKE 202 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/208 (33%), Positives = 120/208 (57%), Gaps = 5/208 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+++DD ++R G++ ++ P ITVV E ++GE+ + L + PD++L+D+ MP +GL Sbjct: 11 IIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLMDIRMPVRDGL 70 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + + ++V + + +E +V AL+ GA G+LLKD P DL++A++ A G Sbjct: 71 SATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVRAVNLAGDGHP 130 Query: 129 VLSEALTPVLAASLRANRAT-----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 LS ++T L A + T R V QLT RE D+ + IAQG N+ I++ L ++ Sbjct: 131 TLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEISQTLYMS 190 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 TVK H+ + K + +RV+ A+ +H Sbjct: 191 IPTVKTHISRIFTKFDVDNRVQIAIRMH 218 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 72/213 (33%), Positives = 125/213 (58%), Gaps = 7/213 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + A +++ DDH ++R G+++L+ + +I V+ E +G+ I +A PD+I++D+NMPG Sbjct: 2 DKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ ++ + S RI+ +V EE VV +K GA Y+LKD+ +L+ +H+ Sbjct: 62 TDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVM 120 Query: 125 AGEMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE+V+ + L LR NR + R LT RE+D+L L+ +G NK +A + I Sbjct: 121 NGEVVIYPRVANRLVRELRQSENRKSEIR----LTKREKDVLTLLVKGNTNKEMAEVMFI 176 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E TVK H+ + +K+ +K R AA++ + RI Sbjct: 177 SEKTVKNHLTSIFRKLGVKDRTHAAIYALKNRI 209 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 2/202 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ DD ++R G+ ++++APD+ V+ ASNG + ++L+ + PDLIL+DL MP MNG+ Sbjct: 4 LLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMNGI 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ +I+V + + +E + A++ GA GYLLKDM DL+ A+ +G+ Sbjct: 64 EATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSGKA 123 Query: 129 VLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +T L + + N+ + +LT RE +L LIA G N IA +L ++E T Sbjct: 124 YVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSEGT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAV 208 V+ HV +L K+ + R +AA+ Sbjct: 184 VRNHVSTILSKLDVADRTQAAL 205 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 78/214 (36%), Positives = 123/214 (57%), Gaps = 8/214 (3%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + P ++L++DD P++R G+ ++ DITV G A +GEQ +E L PD++L+D+ M Sbjct: 11 GEGPISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRM 70 Query: 63 PGMNGLETLDKLREKSLSG----RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 P +GL L +L + L G R+++ + + + V AL GA G+LLK+ E L + Sbjct: 71 PRRDGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTE 130 Query: 119 ALHQAAAGEMVLSEALT-PVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNK 174 A+ AAAG LS A+T ++ L +++++ + LT RE D+L+LI GL N Sbjct: 131 AVRAAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNA 190 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 IA L ++ TVK HV +L K +SR +AAV Sbjct: 191 EIAGELVVSLHTVKTHVSRVLMKTGCQSRAQAAV 224 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 129/212 (60%), Gaps = 4/212 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + +LL DDH ++R G ++LI + VVGEAS+G + +E++ + PD++++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +NG+E ++++ + I++ + E+ ++ L+ GA +LLK+++ LL+A+ Sbjct: 61 AMPRLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIA 177 AGE VL + T + L N+AT + VN LT RE ++LK+ A+G+ NK IA Sbjct: 121 RAVYAGESVLQPSTTRRVIDQL-INKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIA 179 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 +L ++ T++ H+ ++ KK+ + SR EA ++ Sbjct: 180 DQLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_A4TWP7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP7_9PROT Length = 213 Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 74/205 (36%), Positives = 124/205 (60%), Gaps = 11/205 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP--DLILLDLNMPGMN 66 I+L DDH MLR G++ + T++ EA + + + E+ DP DL++LD+ MPGMN Sbjct: 3 IILADDHVMLREGLRPFVERIAPGTIIQEAGSFTEALAQIEA-DPSVDLLILDIKMPGMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G + L ++ + + R V+ S + V+ A++ GADG++ K + ++ AL +G Sbjct: 62 GFQGLSTIKTRFPAIRCVILSSMADRDHVLEAMRLGADGFIPKHLSGGAMVSALQLVLSG 121 Query: 127 E-----MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 E M++ A + AS +R+ + + +LTPRERDIL L+ +GLPNK+IA RLD Sbjct: 122 ERFIPSMLMDSANNQISGAS---DRSPSGDLLGRLTPRERDILHLLREGLPNKVIAARLD 178 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEA 206 + E TVK H+ +M +K+ +++R++A Sbjct: 179 VREVTVKSHLGNMFRKLGVQNRLQA 203 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 77/237 (32%), Positives = 127/237 (53%), Gaps = 26/237 (10%) Query: 1 MSN----QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLI 56 MSN EP I L+DD P+LR G LI D++VV +AS+G++ ++LA D+I Sbjct: 1 MSNPEQESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDII 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+D+ M +NG+ +++ + ++++ + + V A+ GA G+LLKD+EPE+L Sbjct: 61 LMDVQMARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVN---------------------- 154 L A+ +GE VLS +T + +R+ R + Sbjct: 121 LSAIRTVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSA 180 Query: 155 QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 +LTPRE DIL+L+A G N I+ ++ +TVK HV+H+L K + RV+A ++ + Sbjct: 181 ELTPREMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAY 237 >UniRef50_B9JKP6 Two-component response regulator protein n=2 Tax=Agrobacterium RepID=B9JKP6_AGRRK Length = 217 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 75/209 (35%), Positives = 124/209 (59%), Gaps = 3/209 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + A+I++ DDH + R+G+ +++ + ++ +VG+A NG + +EL + L PDLILLD+ M Sbjct: 2 KTASIVIADDHDLARSGIAAVLATSENLDIVGQAKNGLEAVELCDRLRPDLILLDIRMTP 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++GL ++R+ + +IV+ ++ + + A+K GA GYLLKD+ E LL+ + Sbjct: 62 LDGLGAAAEIRKIAPDTKIVMLTMHESIDYLSAAIKVGASGYLLKDVSRESLLRTIDIVL 121 Query: 125 AGEMVLSEALTPVLAASLRANRAT-TERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G+ L + A R +R + E + +LT RER+IL + G NK IAR L I+ Sbjct: 122 DGQAFFDADLMCKMLA--RIDRESPAEMVIERLTNREREILCSLTTGETNKGIARALSIS 179 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVKVHV+ +L K+ + R +AAV Q Sbjct: 180 PGTVKVHVERILSKLGVNDRTQAAVLAIQ 208 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 69/195 (35%), Positives = 116/195 (59%), Gaps = 2/195 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P I+L+DDH ++R GV+ ++ + VVGEA NG ++L + PD++L+D+ +PGM Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L S ++++ S+ + E VV+A++ GA ++LK +LL AL A Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GEMVLSEALTPVLAASL-RANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G LS ++ L + R + T +R + L+PRE +L+L+A+G +K IA LD+ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 184 ESTVKVHVKHMLKKM 198 TV+ + K M+KK+ Sbjct: 182 LQTVRSYRKTMMKKL 196 >UniRef50_B5JTE5 Two-component system regulatory protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTE5_9GAMM Length = 213 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 72/212 (33%), Positives = 127/212 (59%), Gaps = 6/212 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++++DD ++R G+ L+ M+ + VVGEA +GE + L + PD++L+D+ MPG++GL Sbjct: 4 VVIVDDQTLVRHGIANLLGMSDKVEVVGEAGDGESALYLIPQVSPDVVLMDIRMPGLSGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVV-TALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + L KLR + V+ + ++D + A++ GA GYLLKD+ ++LL +L AG+ Sbjct: 64 DVLRKLRASDDNTPPVILLTTFEDQDTLQQAIRLGAKGYLLKDVTLDNLLASLELVMAGQ 123 Query: 128 MVLSEAL---TPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 V + T ++A+ R+ + D LT RE +I++L+++G NK IA RLD+ Sbjct: 124 SVFDNRINHRTDDVSAASRSQASLG--DAYDLTAREVNIIELMSEGASNKEIAFRLDLKM 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK +V +L K+ ++ R +A + + +E F Sbjct: 182 GTVKNYVSSVLLKLGVRDRTQAVIKIKEEGWF 213 >UniRef50_Q0G339 Two-component response regulator n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G339_9RHIZ Length = 223 Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/198 (35%), Positives = 123/198 (62%), Gaps = 2/198 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +I +IDDHP LR G+ L+ V + + + +A ++PD++L+DL MPG + Sbjct: 5 SIAIIDDHPTLRDGLASLVGGVNGYAVAAVGTAASEILSIAMHVEPDVMLVDLQMPG-DV 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L+T+ + R + +IV+F+ S+ + V+ AL GADGY+LK E+LL A+ AG+ Sbjct: 64 LKTIVRTRGLAPETKIVMFTASDRVDHVIAALDAGADGYVLKGSSLEELLLAVEDIKAGK 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +S +L+ + S R +A T+R L+ RE I++ +++GLPNK IA RL+I+E TV Sbjct: 124 TYVSPSLSSKMIQSFR-QKAETQRKRVDLSLREEQIIRFLSEGLPNKTIAIRLNISEKTV 182 Query: 188 KVHVKHMLKKMKLKSRVE 205 K ++ +++K++ ++R+E Sbjct: 183 KHYMTGLIQKLEARNRLE 200 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/224 (32%), Positives = 125/224 (55%), Gaps = 18/224 (8%) Query: 1 MSNQ---EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 M NQ E ++L+DD M+R G+ +I M D+ V GEASNGE+ +++ + PD++L Sbjct: 1 MENQNKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVL 60 Query: 58 LDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLL 117 +D+ MP M+G++ ++ S ++++ + + + +V ++ GA GY+LKD + +D+L Sbjct: 61 MDVQMPNMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDML 120 Query: 118 KALHQAAAGEMVLSEALTP-VLAASLRANRATTERD--------------VNQLTPRERD 162 + +A GE + A LA L+ + E D +QLT RERD Sbjct: 121 DLIRRAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERD 180 Query: 163 ILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEA 206 +L+ ++ G N IA+ L I+ TVK H+ +L+KM ++ R +A Sbjct: 181 VLEQLSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQA 224 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 13/214 (6%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP+ R GV+ +S DI ++GE S+ E+G+ L +PD++L DLN+P M+GL Sbjct: 7 VLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMDGL 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +R + + +V+ SV +E AL+ GA Y K++ P+ L L + A GE Sbjct: 67 EFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARGEY 126 Query: 129 VLSEALT--PVLAASLRANR--------ATTERDVNQLTP---RERDILKLIAQGLPNKM 175 V+++ + P +A + A + D++ +P RE ++L+ IA G NK Sbjct: 127 VINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATNKD 186 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 IA L I+ TVK H+ +L+K+ L R +A ++ Sbjct: 187 IADALKISTQTVKNHISSILRKLSLNDRTQAVLY 220 >UniRef50_C5CCY4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=5 Tax=Bacteria RepID=C5CCY4_MICLC Length = 209 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 79/211 (37%), Positives = 134/211 (63%), Gaps = 10/211 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP--DLILLDLNM-PGM 65 ++L+DDHP++R GV+ ++ PD+TVV EA++G + I + E+ +P D++L+DL M GM Sbjct: 5 VMLVDDHPVVRAGVRAVVEAHPDLTVVAEAADGAEAIGVLEAGEPAVDVVLMDLQMGAGM 64 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ +RE+ ++++ + + E D++ A+ GA GYLLKD E++ A+ QAAA Sbjct: 65 DGVTATRAVRERWPGVQVLILTTFDTEADILAAVNAGAAGYLLKDAPSEEIASAVRQAAA 124 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G +AL P +AA+L R + +V L+ RE ++L+LIA+G NK+ A+ L I+E+ Sbjct: 125 GR----KALAPQVAATLM-GRMSGGSEV--LSEREIELLELIARGATNKVAAKELFISEA 177 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+ H+ +K+ + +R A + RI Sbjct: 178 TVKTHLVHIFQKLGVDNRTRAVDEARRRRII 208 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 69/211 (32%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL+ DDH + R G+++L+ P+ V+GEA++G + ++ A L PD++LLDL MP + GL Sbjct: 12 ILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLLLDLAMPRVPGL 71 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + L +L S +I++ + + + +V AL+ GA G +LK+ + LLK + AG+ Sbjct: 72 DALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIRSVMAGQY 131 Query: 129 VLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRLDITE 184 + + L++ A + D LT RE +IL I G NK IA++ +++E Sbjct: 132 WVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEIAKKFNLSE 191 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK H+ ++ K+ + SR+E A++ +R+ Sbjct: 192 DTVKHHLTNIFDKVGVSSRLELALFAINQRL 222 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 73/215 (33%), Positives = 125/215 (58%), Gaps = 11/215 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+L DDH +LR G+K L++ PD+ V+GEAS+GE+ I+ + L PDL+LLDL MP +NG+ Sbjct: 7 IVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMPKLNGV 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + +++L +K +I+V ++ + EE + L+ GA GY+LK +LL A+ A GEM Sbjct: 67 DCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTVARGEM 126 Query: 129 VLSEALTPVLAASLRANRATTERD-------VNQLTPRERDILKLIAQGLPNKMIARRLD 181 + P +AA + R+ + QL+ RE ++L+ +A G N+ IA L Sbjct: 127 F----IYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLLH 182 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ + +++K+++ R E + + I Sbjct: 183 VSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 65/192 (33%), Positives = 115/192 (59%), Gaps = 2/192 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL++DH ++R G+K L++ D+ VVGE ++G +E AE L PD++++D+NMP ++G+ Sbjct: 7 VLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPKLDGV 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++REK + R+++ S+ + EE V A++ GA GYLLK DL+ A+ + A G Sbjct: 67 GATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVAGGNA 126 Query: 129 VLSEALTPVLAASLRANRATTER--DVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 S + +L R R+ E + LT RER++L L+ +G + IA+ L ++ T Sbjct: 127 FFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGLSVKT 186 Query: 187 VKVHVKHMLKKM 198 ++ H ++ K+ Sbjct: 187 IEGHRGRIMAKL 198 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 5/204 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++L+DDH M+R G+K +++ PD+ VV EAS+GE+G+ A + PD++++DL MP M G+ Sbjct: 6 VMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMTGV 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E L ++ +IV+ + E + L+ GA GY+LK +++L A+ + A GE Sbjct: 66 EATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALGEY 125 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + T V R D LT RER+IL L+A+G N+ IA I+ TVK Sbjct: 126 AIE---TEVEKKVEHHKRHPDLHD--DLTAREREILTLLAKGYDNQRIADESFISLKTVK 180 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQ 212 HV ++L K+ + R +A V+ Q Sbjct: 181 THVSNILSKLAVSDRTQAVVYAFQ 204 >UniRef50_UPI0001C31456 two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31456 Length = 213 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/202 (34%), Positives = 119/202 (58%), Gaps = 1/202 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+++D P++R GV +S P I VVG A +G +G+ LA L PD+I+LDL+MP + G+ Sbjct: 5 VLVVEDFPLVRDGVVDALSRDPGIEVVGAAVDGREGLALAHELRPDVIVLDLHMPEIGGM 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 L++LR + S + +V + + E ++ A+ GA GYL K E+L +A+ G Sbjct: 65 MVLERLRTELPSAKSIVMTATEKAEPLLDAIAAGAAGYLTKRTSGEELRQAILTVHGGGS 124 Query: 129 VLSEALTP-VLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 V++ L P +L A RA+ +LT E ++L+L+AQG+ ++ IA RL ++ TV Sbjct: 125 VIAPQLAPHLLQAYSRASTGEAPDVRKKLTATEHEVLRLVAQGMTDRQIAERLFVSPRTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVW 209 + H+ + +K ++ R + A W Sbjct: 185 QNHLARIREKTSMRRRSDLARW 206 >UniRef50_D1BRR0 Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BRR0_XYLCX Length = 223 Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 122/214 (57%), Gaps = 10/214 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DDHP+LR GV+ + +A + +VGEA++ + LA L PD++LLDL +P +G+ Sbjct: 4 VLVVDDHPVLRDGVRAAL-VAASLDIVGEAASAADAVRLAVELRPDVVLLDLQLPDFSGI 62 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE- 127 E ++ + ++ F++S+ +E V AL+ GA GY++K +E +L+ A+ A G+ Sbjct: 63 EAARRIARDAPDAAVLAFTMSDDDETVFAALRAGAIGYVVKGVESRELVHAIETVAHGDA 122 Query: 128 MVLSEALTPVLAASLRANRATTER--------DVNQLTPRERDILKLIAQGLPNKMIARR 179 + L L + A A RA + +LT RE ++L+L+A G N I++R Sbjct: 123 LFLGPGLARRVLAHFTATRAAASAPRVTNPVLEAARLTDRETEVLELMAAGWGNAEISQR 182 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 L + TV+ +V +L K++ SR EA VW + Sbjct: 183 LYLAPKTVRNNVSTILGKLQASSRGEAVVWARAQ 216 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 117/201 (58%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++LL DD M+R+ ++ +I + D+ VVGEAS+GE I +A L PD++++D+ MP M+G Sbjct: 4 SVLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRMDG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + +R S ++ + + +E + L+ GA G++LK LL+ + A GE Sbjct: 64 VAATRSIRSASSPPAVLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVARGE 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +S T L + T + ++T RERD+L L+ + + N IA RL I ESTV Sbjct: 124 GFVSPGPTRRLIERVSVPEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEESTV 183 Query: 188 KVHVKHMLKKMKLKSRVEAAV 208 K HV+++L K+ ++RV+AA+ Sbjct: 184 KYHVQNLLTKLDARTRVQAAL 204 >UniRef50_A4FB05 Two component system response regulator n=43 Tax=Bacteria RepID=A4FB05_SACEN Length = 235 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 77/210 (36%), Positives = 132/210 (62%), Gaps = 8/210 (3%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 TI++ DD M+R G+ L+S PD+ V+ EA++G+ + + PD++L+D+ MPG++G Sbjct: 7 TIVVADDQAMIRAGLVALLSAEPDLRVLAEAADGQAAVAAVQRRRPDVVLMDVRMPGVDG 66 Query: 68 LETLDKLREKSLSGR--IVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 + ++ + + G+ +++ +V + +E V AL+ GA G+LLKD PE+L++A+H AA Sbjct: 67 ITAAREIVDIT-DGQTSVIMLTVHDLDEYVYAALRAGASGFLLKDAPPEELVRAVHTVAA 125 Query: 126 GEMVLSEALTPVL---AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G+ +L+ +T L ASL A TE ++ LT RERD+L +A+G N IAR L + Sbjct: 126 GDALLAPRVTRRLLQRFASLGVRDAGTE--LSGLTDRERDVLLEVAKGGSNAEIARNLGL 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 E TVK H+ H+++K+ L SR + + ++ Sbjct: 184 AELTVKSHLYHVMQKLHLNSRTQLVITAYE 213 >UniRef50_C6VXD5 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXD5_DYAFD Length = 220 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 70/212 (33%), Positives = 122/212 (57%), Gaps = 12/212 (5%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P IL++DDH ++R G+ L+ D+ + GEAS+G++ ++ E + PD+ILLDL MP M Sbjct: 2 PIRILVVDDHSVVRQGIITLLEDEEDLIIAGEASDGDEVWDMVEKVKPDVILLDLTMPRM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GLE + ++ S +I+VFS+ N+ + V+++ GA GYL KD E++L+A+ A Sbjct: 62 PGLEVIRQIVPVFPSAKILVFSMHNNTDYVLSSALNGASGYLEKDTSREEMLRAIRAIAK 121 Query: 126 GEMVLSEALTPVLAASL-----------RANRATTERDVNQ-LTPRERDILKLIAQGLPN 173 G++ + V+ +L A E+ + + +TPRE+ ILK + +G+ + Sbjct: 122 GDLYFPPYASSVIIKNLLKQLARVPDTRAAQEEVQEKSIWKIITPREQQILKCLTEGMSS 181 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVE 205 K IA + DI+ +TV ++KK +++ E Sbjct: 182 KDIAEKFDISSNTVANQRASIMKKANVRNTAE 213 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/218 (34%), Positives = 123/218 (56%), Gaps = 11/218 (5%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD--PDLILLDLNMP 63 P + L+DD M+R G + +I PD+TVV EA +G + + + +L D++L+D+ MP Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+GL L + + R+VV + + +E V+ A++ GA G++LKD PE++L A+ Sbjct: 69 RMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTV 128 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNK 174 AG+ V++ + T L L T D + LT RER++L+L+A+G N Sbjct: 129 HAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNT 188 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 IA L + E+TVK HV +L K+ + RV+A V ++ Sbjct: 189 EIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE 226 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 71/193 (36%), Positives = 111/193 (57%), Gaps = 1/193 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL+DDH ++R G+K ++++ I VV EA+NG + I A+ L PD++++DL MP MNG+ Sbjct: 15 VLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMNGI 74 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + ++ R +V S+ V+ K GA GYLLKD E+L+ A+H A+GE Sbjct: 75 EAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASGEP 134 Query: 129 VLSEALTP-VLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L +T V+ + A + QL+ RER++L+LIA G K IA ++ TV Sbjct: 135 YLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIKTV 194 Query: 188 KVHVKHMLKKMKL 200 V ++KK+ L Sbjct: 195 AVQRMSVMKKLNL 207 >UniRef50_C2AL02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AL02_TSUPA Length = 213 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 75/206 (36%), Positives = 119/206 (57%), Gaps = 7/206 (3%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQ-GIELAESLDPDLILLDLNMPGMNG 67 +L++DD ++R ++ L D VVGEA +G+Q G E A +L PDL+L+DL MPG +G Sbjct: 4 VLIVDDQRLIRDSLRMLFDGVDDFEVVGEARDGQQAGDEFARTL-PDLVLMDLRMPGADG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + +++++ + +VV + + ++ + AL+ GA G+L KD+ PEDLL A+ + AG+ Sbjct: 63 IVGIERIKAQDPDAAVVVLTTFDDDDHLYPALRAGAAGFLAKDIAPEDLLDAVRRTLAGD 122 Query: 128 MVLSEA-----LTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + LS A + L A A LT RER++L LI QGL N IA L + Sbjct: 123 VPLSPATVKRLIGQALVARTDAPAPAAAPAEYSLTAREREVLALIGQGLSNAEIAAELHL 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAV 208 +TVK HV ++L K +R++ A+ Sbjct: 183 AVTTVKSHVTNLLAKTDSSTRLQLAL 208 >UniRef50_UPI00018742FB two component transcriptional regulator, LuxR family n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI00018742FB Length = 235 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 26/225 (11%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L+ +D ++R QLI P + V+G +G + + LA D ++++D+ MP M+G+ Sbjct: 6 VLVAEDQALIRQSFAQLIDAHPQMKVIGAVGDGAEAVRLASGAD--VVVMDIRMPVMDGI 63 Query: 69 ETLDKLREKSLSG--------RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 E ++ + + SG +++V + E+ V+ AL+ GA G+LLKD P +LL A+ Sbjct: 64 EATRQIAQGAPSGGAARASSPKVLVLTTFREEDLVLGALEAGAAGFLLKDSNPRELLSAI 123 Query: 121 HQAAAGEMVLSEALTPVL---------------AASLRANRATTERDVN-QLTPRERDIL 164 + GE V+ +TP++ +AS + D Q TPRE++IL Sbjct: 124 MRIHRGEGVIDPKVTPMVLRHVSPRAPHSGRPASASSTHGAGSDPTDAGTQFTPREQEIL 183 Query: 165 KLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 L+ QGL N IARRL + +TVK HVK +L K +SRV+ +W Sbjct: 184 NLVCQGLSNDEIARRLVVATTTVKTHVKALLTKTGSRSRVDLVIW 228 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 65/216 (30%), Positives = 116/216 (53%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +L+ DD ++R+ + +I + PD+ +VG +GE + A ++ D+ LLD+ Sbjct: 1 MAADDVIRVLVADDQELMRSALGTVIDVQPDMRLVGSVPSGEDAVREALAVSVDVALLDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 M M+G+E ++R R+++ + + +E + ++ GA G+L KD D+ A+ Sbjct: 61 RMARMDGIEACAEIRRHRPDTRVLMLTTFDLDEYLFRSVAAGASGFLTKDTPGADVAGAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + +G V+S T L + L+PRERD+L L+A+G N IAR L Sbjct: 121 REVHSGRSVVSPRATRALIDRIARAAPDAAAVAADLSPRERDVLALLARGFSNAEIAREL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + ESTVK HV + +K+ ++ R+ VW ++ IF Sbjct: 181 FVAESTVKTHVSSLTRKVGVRDRLHVVVWAYRNGIF 216 >UniRef50_C9Z7N3 Putative two-component response regulator n=2 Tax=Streptomyces RepID=C9Z7N3_STRSW Length = 223 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/212 (35%), Positives = 117/212 (55%), Gaps = 5/212 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +++ DD +R G+ ++ + PDI VVG A++G Q ++L L PD +LLDL+MP M Sbjct: 10 PLRVVVADDQASVREGLSLMLDLLPDIDVVGSAADGRQVLDLVAELSPDAVLLDLHMPVM 69 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +L + IVV + + V+ AL+ GA YL KD + + LH AAA Sbjct: 70 DGIEATRRLTAEHPEVAIVVLTTYADDRSVLDALRAGARSYLTKDADRMHIAATLHSAAA 129 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRLD 181 G VL + L A+ + A ++R + LT RE +IL LIAQGL N IA RL Sbjct: 130 GLSVLHPQVQATLLAAA-SGTAVSDRPARKLPDGLTRREAEILTLIAQGLNNAEIADRLF 188 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 ++ +TVK H+ + K + + R A ++ + Sbjct: 189 LSGNTVKTHINRVFAKTRSRDRAAATLYARRH 220 >UniRef50_A4FFD8 Response regulator, two-component system n=6 Tax=Actinomycetales RepID=A4FFD8_SACEN Length = 217 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/208 (33%), Positives = 126/208 (60%), Gaps = 3/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 + ++DDH ++R G+ L++ D+ ++GEAS + + L +PD+ +LD+ +P NG+ Sbjct: 5 VFVVDDHEVIRRGIAALVNAESDLELIGEASTVAESLALVPQANPDVAVLDVRLPDGNGV 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E +L+ + R ++ + + + ++ A+ GA G++LK + E+L+ A+ A +GE Sbjct: 65 ELCRELQSRRPGLRCLMLTSFDDHDALMDAIIAGAAGFVLKGVVSEELVNAIRTAGSGES 124 Query: 129 VLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +LS T + A LR R + D + +LT RER++L+LI +GL N+ I++R+ + E TV Sbjct: 125 LLSAKKTEAMLAWLR--REQEQADPLRELTAREREVLELIGEGLTNREISQRMFLAEKTV 182 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 K +V ML K+ ++ R EAAV + R+ Sbjct: 183 KNYVSQMLSKLAMRHRSEAAVLATELRL 210 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 68/207 (32%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIEL-AESLDPDLILLDLNMPGMN 66 ++L+ DD P +R +K L+ M PDI V A +GE+ + L + L D++L+D+ MP + Sbjct: 3 SVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVCD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++RE+ R+++ + + ++ +V AL+ GA GYLLK++ P+ +++ + G Sbjct: 63 GVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHDG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIARRLDI 182 M++ + L LR R LTP E+ ++ LIA+GL NK IA +L + Sbjct: 123 NMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLYL 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVW 209 +E TVK +V +L K+ L+ R + A++ Sbjct: 183 SEGTVKNYVTEILGKLNLRDRTQIAIF 209 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 123/201 (61%), Gaps = 4/201 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 IL+ +D ++R G+ L+++ D+T+VGEA +G+ IE+A +L PD++L+DL+MP ++G+ Sbjct: 5 ILIAEDQQLVRQGLVALLAV-DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELDGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ + R++V +V+N E V AL GADGY LK + +L+ A++ AG+ Sbjct: 64 EATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAGKT 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L L+ L ++ ++ LT RER++L+LIA+G N+ IA L I TV+ Sbjct: 124 YLGPGLSEDL---VKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVE 180 Query: 189 VHVKHMLKKMKLKSRVEAAVW 209 H +++K+ L + E A + Sbjct: 181 THRTKIMQKLDLHNSAELAAY 201 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 67/205 (32%), Positives = 120/205 (58%), Gaps = 1/205 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ DD +LR + L+ APD+ V+G A +GE+ + +A + PD++L+D+ MP ++G+ Sbjct: 73 VVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVDGI 132 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ R+++ + + +E V AL+ GA G+LLKD P DLL A+ A+GE Sbjct: 133 EATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASGEA 192 Query: 129 VLSEALTPVLAASLRANRATTE-RDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +LS ++T L A A ++ +T RER++L+L+A+GL N I L ++ T+ Sbjct: 193 LLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRGTL 252 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 K HV +L K+ + R + + ++ Sbjct: 253 KTHVGRLLHKLGARDRAQLVIAAYE 277 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 116/201 (57%), Gaps = 2/201 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +LL++D P+ R G+ ++ P I +V EA +GE + LA P L+LLD+ +PG++G Sbjct: 7 VLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLPGLDGR 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTA-LKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +TL +L+++ R++V + S E +V A L+ GADGY LK + P+ LL + + +AG Sbjct: 67 QTLVRLKQEHPEIRVLVLT-SREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREVSAGN 125 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + + ++ + + LT RER++L IA+G N I R+L I+ TV Sbjct: 126 GWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHISSGTV 185 Query: 188 KVHVKHMLKKMKLKSRVEAAV 208 +VHV +L+K+ R +AAV Sbjct: 186 RVHVHAILRKLGATDRTQAAV 206 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 69/193 (35%), Positives = 114/193 (59%), Gaps = 3/193 (1%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +L DDH ++R G++ + D+ VVGEA+NG + + LA L PD++L+D++MP MNGLE Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHDLRPDVLLMDVSMPVMNGLE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++R+ +++ SV ++ E V ++ GA GY+LKD+ +++ A+ A+G Sbjct: 61 AATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAEMITAITSVASGGYY 120 Query: 130 LSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKV 189 S A+ P L A + D LT RER +L IA+G PNK +A+ L I+ TV+ Sbjct: 121 FSSAVGPTLVG---AGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTVES 177 Query: 190 HVKHMLKKMKLKS 202 H ++ +K+ K+ Sbjct: 178 HRLNLREKVGNKN 190 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 76/206 (36%), Positives = 113/206 (54%), Gaps = 2/206 (0%) Query: 11 LIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLET 70 LIDDH +LR V +++ DI+V+G++ + GI +L PD+ +LDL MPGM GL Sbjct: 8 LIDDHHVLRQAVVEMLEAEEDISVIGQSGDARSGIGEIANLKPDVAILDLKMPGMTGLAA 67 Query: 71 LDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVL 130 + ++ + I++F++ ++ V GA GY+LK EDLL+A+ AG L Sbjct: 68 IGEILRAAPKTGIIIFTMYDNPAYVWETTNAGASGYVLKSASKEDLLRAVRAVHAGGGYL 127 Query: 131 SEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVH 190 +T L L A A T LT RE +L+ +A G NKMIA+ L ITE TVK H Sbjct: 128 QAEVTKPLLRRL-AQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSITEDTVKAH 186 Query: 191 VKHMLKKMKLKSRVEA-AVWVHQERI 215 +K + +K+ R A A+ + Q+ I Sbjct: 187 LKSLYEKLGASDRAHAVAISLRQQLI 212 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/217 (32%), Positives = 129/217 (59%), Gaps = 5/217 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 ++ E +L++DD ++R G K ++S + VVGEASNG + E + +L P ++L+D+ Sbjct: 37 VNTSETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDI 96 Query: 61 NMPGMNGLETLDKL-REKSLS-GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP +G+ K+ + +L+ R++V + + +E V AL+ GA G++LKD EP+D+++ Sbjct: 97 RMPVEDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVR 156 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKM 175 A+ AAG+ ++ ++T L + ++R T LT RER+IL+ +A+G+ N+ Sbjct: 157 AVRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEE 216 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 IA L I+ +TVK H+ ++ K+ R + V ++ Sbjct: 217 IADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYE 253 >UniRef50_C5BYM0 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BYM0_BEUC1 Length = 209 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/198 (33%), Positives = 117/198 (59%), Gaps = 4/198 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I+++DDHP++R G++ ++ D+ VVGEA++ ++ + + + PDL++ DL MPG G+ Sbjct: 5 IVVVDDHPVVRDGIRGQLATTDDLDVVGEAASADEALAVVAATSPDLVVTDLRMPG-GGV 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + L + ++V + + +DV+ AL GA GY+LKD E+L +A+ A GE Sbjct: 64 SLITHLAASAPGVAVLVLTTYDTPDDVLPALDAGARGYVLKDAPREELFRAVRAVADGET 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 L+ ++ +L + +RA + L+ RE D+L+L+A G N+ A+ L +TE+TVK Sbjct: 124 FLAPSVAGLLVSRVRARQQPAP---AALSGREVDVLRLVADGRTNRQAAQLLGVTEATVK 180 Query: 189 VHVKHMLKKMKLKSRVEA 206 H+ H+ K+ + R A Sbjct: 181 THLLHVYAKLGVPDRAAA 198 >UniRef50_C4DCC2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DCC2_9ACTO Length = 225 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 12/208 (5%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 L++DD ++R G+ L+ PDITVV +A++G+ + AE D+ L+D+ MPGM+G+ Sbjct: 5 LIVDDDALVRLGLCDLLDDEPDITVVAQAADGKSAVAQAERHRVDVALMDVRMPGMDGIA 64 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 +LR +++ + + +E V + GA G+LLKD +P ++++A+ AAG+ + Sbjct: 65 ATARLRALPEPAQVIALTTFDLDEYVYDMIAAGAAGFLLKDTDPGEIIRAIRVVAAGDAM 124 Query: 130 LSEALTPVLAASL--RANRATTER------DVNQLTPRERDILKLIAQGLPNKMIARRLD 181 L P A L R +RA R V++LTPRE D+L+ +A G N IA L Sbjct: 125 LH----PAAARRLIERYHRAARPRATAVRHRVDRLTPRETDVLRHLALGATNAEIAASLS 180 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVW 209 + ESTVK HV +L + + +RV+AA+ Sbjct: 181 MRESTVKAHVTRILATLDVTNRVQAALC 208 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 72/206 (34%), Positives = 117/206 (56%), Gaps = 3/206 (1%) Query: 3 NQEPATI--LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 + PATI LL DDH ++ G+ LI +TVVGEA++GEQ ++LA + PD++L+D+ Sbjct: 2 TEPPATIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDI 61 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG+ G+E ++ + +V+ ++ +E V AL+ GA GYLLK + +D+++ + Sbjct: 62 EMPGIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTI 121 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G+ V + + + + A +LT RER++L L+A G PN IAR L Sbjct: 122 GAVARGDAVFGPDVAHRVLRTFTSPPAENA-PFPELTEREREVLSLLANGWPNSRIARHL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEA 206 +T TV +V ++L K+ R A Sbjct: 181 QLTPKTVANNVSNILAKLHAPDRTAA 206 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/205 (34%), Positives = 118/205 (57%), Gaps = 6/205 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L +DDH M+R G+ +S DI VVGE ++G++ I A L PDLIL+DL M M+G+ Sbjct: 5 VLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMDGV 64 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++++ ++++ + +++V AL G D Y+LK +D+ A+ + + GE Sbjct: 65 EATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRGES 124 Query: 129 VLSEALTPVLAASLRANRATTERDVNQ-LTPRERDILKLIAQGLPNKMIARRLDITESTV 187 V P + +R NR ++ + LT RE +IL LIA+G N+ IA IT TV Sbjct: 125 VFE----PEVLVKMR-NRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTV 179 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 K HV ++L K++++ R +A ++ Q Sbjct: 180 KTHVSNILSKLEVQDRTQAVIYAFQ 204 >UniRef50_D2AWW3 Response regulator receiver protein n=6 Tax=Actinomycetales RepID=D2AWW3_STRRD Length = 221 Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 70/207 (33%), Positives = 119/207 (57%), Gaps = 3/207 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD M+ ++ ++S A D+ VV EA +G + +E P ++L+DL+MPG++GL Sbjct: 4 VLIVDDERMVCAQLRTILSAAEDLVVVAEAYDGAEAVEAVVRHRPHVVLMDLHMPGVDGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 ++ + ++VV + + + V+ A+ GA G+LLKD PEDL+ + AA G Sbjct: 64 AAIEHIVRFPAPPKVVVLTTFDRDGYVLRAMSLGAAGFLLKDTPPEDLIGLVRVAADGHT 123 Query: 129 VLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 VLS A T L + + A +R + LT RE ++L + +GL N IARRL ++E+ Sbjct: 124 VLSPAATRRLLTASAGHGAARDRALARIADLTDREVEVLTCLGEGLSNAKIARRLYLSEA 183 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 T+K +V ML K+ +R +A + + Sbjct: 184 TIKSYVSRMLVKLGFSNRTQAGLLASE 210 >UniRef50_C5SMW9 Two component transcriptional regulator, LuxR family n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SMW9_9CAUL Length = 239 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 14/208 (6%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ++LI+D P +R + LI APD+ + GEA + +G+ L ++ PDLI+LDL + +GL Sbjct: 24 LVLIEDDPFVRRHIATLIEAAPDMRLTGEAGSVAEGLSLLDT-GPDLIVLDLGLSDGSGL 82 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E + R++ L+ RI++ +V E V++AL GADGY+LKD +L+ ++ G Sbjct: 83 EIIKSARQQGLATRILILTVFGDETSVISALTAGADGYVLKDSAESELIGSIRHTLNGGS 142 Query: 129 VLSEALTPVLAASLRANRATTE----------RDVNQLTPRERDILKLIAQGLPNKMIAR 178 +S PV A LR R D +TPRE ++L L+A+GL K A Sbjct: 143 PIS---APVAAYLLRHIRKDASLAVVAEPELAEDAPGITPREIELLSLLAKGLSYKEAAS 199 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEA 206 LDI+ TV HVK + +K+ + SR EA Sbjct: 200 VLDISHHTVGTHVKAIYRKLAVNSRSEA 227 >UniRef50_D1YA26 Response regulator receiver domain protein n=2 Tax=Propionibacterium acnes RepID=D1YA26_PROAC Length = 218 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 121/212 (57%), Gaps = 7/212 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +LL+DD ++R V+Q++ A D+ VVGEAS+G+ + A D++L+DL +PGM Sbjct: 3 PVRVLLVDDDTLVRRAVRQILEAADDLEVVGEASDGDGAVRQAPQ--ADVVLMDLRIPGM 60 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++ S ++VV + + + A+ GA G+LLK PED++ A+ A Sbjct: 61 SGVEATSRITHSPSSPKVVVLTTVTTDAAITDAIHAGALGFLLKTSSPEDIVSAVRAAHT 120 Query: 126 GEMVLSEALTPVLAASLRANRA-----TTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ +S T L LR++ + ++ LT RER++ +A+GL N IA RL Sbjct: 121 GDAFMSPTSTRQLLEQLRSDTGRRGHRAARKTLSALTDREREVAIAVAEGLTNDAIAARL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 +I+ STVK H+ + K+ + SRV AV V + Sbjct: 181 NISASTVKAHLSTIQTKLNVDSRVRIAVLVER 212 >UniRef50_A9AVS1 Two component transcriptional regulator, LuxR family n=6 Tax=Chloroflexi (class) RepID=A9AVS1_HERA2 Length = 250 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/213 (30%), Positives = 125/213 (58%), Gaps = 8/213 (3%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I+L+ H + R G++ P ++GEASNG+Q I L + +PD+I++D+++PG+NG Sbjct: 22 NIVLVHAHTIYREGLRYHFGQVPRYKIIGEASNGQQAIRLVDYSNPDIIVMDVDLPGVNG 81 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E ++ + +++ S N +E +V +L+ G YL + ++ +DL+ ++ +G Sbjct: 82 IEVARTVKLNHPNIGVILLSDINDQEGIVKSLRAGVAAYLSRTIDWDDLINSVDMVRSGN 141 Query: 128 MVLSEAL--TPVLAASLRAN------RATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 +++ + TP +AA++ + TE + ++PRE ++L+L+A G NK IA R Sbjct: 142 YPINDLVLNTPAVAAAVMDSFRQLTMDTHTEHVYSPMSPREIEVLELVAAGQTNKEIAAR 201 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L+I+ TVK H+ +L+K+ + R +A V+ Q Sbjct: 202 LEISNQTVKNHISSILRKLAVNDRTQAVVFALQ 234 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 72/205 (35%), Positives = 118/205 (57%), Gaps = 6/205 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL DDH ++R G++ L+ P V+G+A++G + LA PD++++D+ MPG+NG+ Sbjct: 6 ILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPGLNGI 65 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 E ++ K IV S+ + E V+ ALK GA YLLKD DL+ A+ + G+ Sbjct: 66 EAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVSEGKA 125 Query: 129 VLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRLDITE 184 S A++ +L R ER + LT RER++L+L+A+G NK +A L+++ Sbjct: 126 FFSPAISKMLVEDYM--RQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNLSL 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVW 209 TV+ H ++L+K+ L S E ++ Sbjct: 184 YTVETHRGNILQKLNLHSGAELILY 208 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 120/203 (59%), Gaps = 2/203 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E ++++ +DH +LR G+K L+ P + V GEAS+G+ ++L + P+L+L+D++MP Sbjct: 3 EGYSLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPR 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G++ ++++ R++V +V E V AL GADGY+LKD ++ + A+ Sbjct: 63 MDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVL 122 Query: 125 AGEMVLSEALT-PVLAASLRANRA-TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G++ LS ++ V+ L R + LTPRE++I +L+A+G N+ IA L + Sbjct: 123 GGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVV 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVE 205 + TV+ H ++++K+ + S E Sbjct: 183 SVKTVEKHRSNLMQKLGVHSAAE 205 >UniRef50_A1T4U2 Two component transcriptional regulator, LuxR family n=8 Tax=Actinobacteria (class) RepID=A1T4U2_MYCVP Length = 220 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 77/223 (34%), Positives = 123/223 (55%), Gaps = 11/223 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLIS-MAPDITVVGEASNGEQGIELAESLDPDLILLD 59 M P I+L+DDH M+ G+K +++ +TVVG+A ++ + + LDPD++L D Sbjct: 1 METASPVRIVLVDDHEMVIEGLKAMLAAFGSRVTVVGQAVGADRVLGVVTELDPDIVLCD 60 Query: 60 LNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 + M G +GL+ +LRE+ ++V+ SV + E+ + AL+ GA GYLLK + E+L+K Sbjct: 61 VRMQGSSGLDVCQQLRERDPDRKVVMLSVYDDEQYLFQALRVGASGYLLKSISSEELVKQ 120 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRATTERD------VNQLTPRERDILKLIAQGLPN 173 L G+ A+ P +AA A +RD LT RE +IL L+ GL N Sbjct: 121 LESVHGGQT----AIDPSMAARAADTAARMQRDEFWPGARRGLTQRESEILALVVNGLSN 176 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + IA +L I + TVK H+ + +K+ + R AA +E I+ Sbjct: 177 RAIAAKLIIGDETVKTHLSSIYRKLGVSDRTAAAATALREGIY 219 >UniRef50_A4FK96 Two-component system response regulator n=2 Tax=Actinomycetales RepID=A4FK96_SACEN Length = 230 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 78/213 (36%), Positives = 118/213 (55%), Gaps = 2/213 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + Q P ++L DD MLR G++ L+ I VV EA NGE+ + PD++L+D+ Sbjct: 8 AAQRPIRLVLADDEVMLRRGLRVLLEQGGRIRVVAEAGNGEELLAAVRGHRPDVVLVDVQ 67 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP +GL L LR + V + + ++ V AL+ GA+G+LLKD +P L++A+ Sbjct: 68 MPSKDGLSALRDLRAMAAPPIAAVLTTFDLDDYVAEALRLGANGFLLKDADPAVLVRAVI 127 Query: 122 QAAAGEMVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 AAG VL +T L R + A R V L+ RER +L L+A G N I R Sbjct: 128 DLAAGGAVLDPRITARLLPRFRNLGDSADEVRLVRTLSARERQVLFLLADGRSNADIGDR 187 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L +TE+TVK +V +L K+ ++RV+AA+ + Sbjct: 188 LGLTEATVKSYVSTVLGKLGAENRVQAALIAQR 220 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 70/199 (35%), Positives = 121/199 (60%), Gaps = 10/199 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GMNG 67 +L+ DDH ++R+ +K +I+ D+ V+G+A++G + ES PD++L+DL+MP G NG Sbjct: 3 LLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSMPPGENG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L T ++ E ++++ ++ + E + AL+ GA GY++K+ E LL A+ G+ Sbjct: 63 LLTTKRITEAFPETKVILLTMHDEEAYITQALQAGAQGYIMKNSSEELLLDAIRSVMGGQ 122 Query: 128 MVLSEALTPVLAASLRA----NRA-TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 +++ PV S + RA +E + +L+ RE++IL LIA G NK IA RL I Sbjct: 123 IIID----PVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFI 178 Query: 183 TESTVKVHVKHMLKKMKLK 201 + TV+VH H++KK+++K Sbjct: 179 SAKTVEVHKSHIMKKLEMK 197 >UniRef50_C1D480 Putative transcriptional regulator, LuxR family, putative sensory transduction protein liaR n=1 Tax=Deinococcus deserti VCD115 RepID=C1D480_DEIDV Length = 210 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/203 (34%), Positives = 120/203 (59%), Gaps = 5/203 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +LL++DH R G++ ++ PD+ VVGEA +GE+ +E+ D+ ++D+ +PGM Sbjct: 5 PIRVLLVEDHAFTRDGLRVAVNFEPDLRVVGEARSGEEALEVLSRTAVDVAVVDIGLPGM 64 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G++T ++R R+V+ + N +V+ AL GAD Y LK P+ LL A+ AA Sbjct: 65 DGIQTAGEVRRHYPQTRVVMLTAHNLRAEVLAALASGADAYCLKSARPDLLLLAIRAAAV 124 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G L + + ++R E L+ RE ++L+LIA GL N+ I +L+I+ S Sbjct: 125 GSAFLDPQVAHHVLGAMRTPGVPVE-----LSARELEVLRLIADGLGNREIGMQLEISVS 179 Query: 186 TVKVHVKHMLKKMKLKSRVEAAV 208 +VK+HV+ +L+K++ R +AAV Sbjct: 180 SVKLHVQDLLEKLQASDRTQAAV 202 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 73/203 (35%), Positives = 112/203 (55%), Gaps = 9/203 (4%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIE-LAESLDPDLILLDLNMPGMNG 67 IL++DDHP+LR GV L+ + V +A N + + L +S D D I+LDL +PGMNG Sbjct: 3 ILIVDDHPILRDGVAALLRQNGEDVTVAQAGNADDAMRMLDQSADFDAIVLDLKLPGMNG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L+ + K +I+V S S DV A RGA GY+ K P +L A+ GE Sbjct: 63 LDAISAFAGKCPQLQIIVLSTSEDAADVRAAFARGALGYVPKSAGPHTVLSAIRMVLDGE 122 Query: 128 -----MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 ++L ++ + AA A R LT R+ ++L+ +A+G+PNK+IA RL++ Sbjct: 123 RYVPPLMLDDSSS---AAPGSPRPAPATRSAGPLTQRQIEVLRYVAEGVPNKVIADRLNL 179 Query: 183 TESTVKVHVKHMLKKMKLKSRVE 205 +E TVK HV + K + + +R + Sbjct: 180 SEKTVKAHVTAIFKALNVLNRTQ 202 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 6/214 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 EP ++L DD ++R G++ +I AP + VVGEA+ G + +A D++L+D+ MPG Sbjct: 12 EPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIRMPG 71 Query: 65 MNGLETLDKL-REKSLSG-RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 ++GL ++ + SL+G R+++ + ++ V AL+ GA G+L K P+ L+ A+ Sbjct: 72 LDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDAIRT 131 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPNKMIAR 178 A G+ +LS + T L A + + T + LT RER++ L+A G+ N IAR Sbjct: 132 VARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTDIAR 191 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 +L ++ TVK HV H + K+ + R + V +Q Sbjct: 192 QLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQ 225 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 122 bits (307), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 77/211 (36%), Positives = 122/211 (57%), Gaps = 11/211 (5%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGE-ASNGEQGIELAESLDPDLILLDLNMPGMNG 67 + LIDDH ++R+G QL+S+ DI VVG+ AS + G+ L + L+ D+ ++D+ MP +G Sbjct: 6 VALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLLK-LNVDVAVMDIAMPDESG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L L +LR+K + R ++ S+ + V +AL GA GYL K PE+L++A+ AG Sbjct: 65 LSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAVHAGG 124 Query: 128 MVLSEALTPVLAASLRANRATTER--DVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 L A ++RA R + +R + LTPRER+I L+ GL K IA +LD++ Sbjct: 125 SYLC-------ADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHK 177 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV VH ++L K+ + VE + Q ++ Sbjct: 178 TVHVHRANVLDKLHCATTVELVHFALQHQLL 208 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 122 bits (306), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 69/220 (31%), Positives = 126/220 (57%), Gaps = 16/220 (7%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 I L+DD ++R G + ++ PD++VVGEA +G+ ++ +++ D++L+D+ MP ++G+ Sbjct: 5 IFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDGI 64 Query: 69 ETLDKL--REKSLSG---RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 E L R+K G ++VV + + +E AL+ GA G+LLKD PE+LL A+ Sbjct: 65 EATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRAV 124 Query: 124 AAGEMVLS--------EALTPVLAASLR--ANRATTERDVNQ-LTPRERDILKLIAQGLP 172 A+G+ V++ E P L + A+ A + + + LT RE ++ + +A GL Sbjct: 125 ASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGLS 184 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 N IA+ L + E+T+K H+ +L K+ + RV+ + ++ Sbjct: 185 NTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 4/208 (1%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +L++DD ++R G++ LI D+ VVGEAS+G + + LA PD++L+DL MP M G+ Sbjct: 4 VLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMGGV 63 Query: 69 ETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 ET +R L +VV + +H+ DVV A++ GA GYLLKD+ ++L A+ A G Sbjct: 64 ETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAVTG 123 Query: 127 EMVLSEALTPVLA--ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 ++ + ++ S +R E + LT RE DIL + +GL N+ I + L ++ Sbjct: 124 GAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFLSP 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 T + +V +L K+ ++ R + V H+ Sbjct: 184 ETARTYVSRLLAKLGVRDRSQLVVLAHK 211 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL ... 312 7e-84 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 304 2e-81 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 295 7e-79 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 293 3e-78 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 291 1e-77 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 290 2e-77 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 289 5e-77 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 289 5e-77 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 288 7e-77 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 287 2e-76 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 286 3e-76 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 286 5e-76 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 285 8e-76 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 285 8e-76 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 284 1e-75 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 282 4e-75 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 282 8e-75 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 280 2e-74 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 280 2e-74 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 279 5e-74 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 278 6e-74 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 278 6e-74 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 277 2e-73 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 277 2e-73 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 275 5e-73 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 275 6e-73 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 275 8e-73 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 275 9e-73 UniRef50_A3Y699 Putative two component system response regulator... 274 1e-72 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 273 4e-72 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 273 4e-72 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 272 4e-72 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 272 6e-72 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 272 8e-72 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 272 8e-72 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 272 9e-72 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 271 1e-71 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 271 1e-71 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 270 3e-71 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 269 4e-71 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 269 5e-71 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 267 1e-70 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 267 2e-70 UniRef50_UPI0001789139 two component transcriptional regulator, ... 267 2e-70 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 267 3e-70 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 267 3e-70 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 266 3e-70 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 266 4e-70 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 265 7e-70 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 265 8e-70 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 265 9e-70 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 265 1e-69 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 264 1e-69 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 264 1e-69 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 264 1e-69 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 264 1e-69 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 264 2e-69 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 263 2e-69 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 263 2e-69 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 263 3e-69 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 263 4e-69 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 262 5e-69 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 262 5e-69 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 262 6e-69 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 262 7e-69 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 262 8e-69 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 262 8e-69 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 262 9e-69 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 262 9e-69 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 261 1e-68 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 261 1e-68 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 261 1e-68 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 261 1e-68 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 261 2e-68 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 261 2e-68 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 260 2e-68 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 260 2e-68 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 260 4e-68 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 259 4e-68 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 259 5e-68 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 259 6e-68 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 258 7e-68 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 258 7e-68 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 258 8e-68 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 258 8e-68 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 258 8e-68 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 258 1e-67 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 258 1e-67 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 258 1e-67 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 258 1e-67 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 258 1e-67 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 257 1e-67 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 257 2e-67 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 257 3e-67 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 257 3e-67 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 257 3e-67 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 256 3e-67 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 256 4e-67 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 256 4e-67 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 256 5e-67 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 256 5e-67 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 255 5e-67 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 255 5e-67 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 255 6e-67 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 255 7e-67 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 255 7e-67 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 255 8e-67 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 255 1e-66 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_B2JVP2 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 254 1e-66 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 254 2e-66 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 253 2e-66 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 253 3e-66 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C1YGP4 Response regulator containing a CheY-like receiv... 253 3e-66 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 253 4e-66 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 253 4e-66 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Proteas... 253 4e-66 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 252 5e-66 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 252 6e-66 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 252 8e-66 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 252 8e-66 UniRef50_C4RJG1 Two-component system response regulator receiver... 252 8e-66 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 252 8e-66 UniRef50_Q04VJ6 Receiver component of a two-component response r... 252 9e-66 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 252 9e-66 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 252 9e-66 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 251 1e-65 UniRef50_B2KE01 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 251 1e-65 UniRef50_A5WD77 Two component transcriptional regulator, LuxR fa... 250 2e-65 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 250 2e-65 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 250 2e-65 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 250 3e-65 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 250 3e-65 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 249 4e-65 UniRef50_C9Z3C4 Putative two-component system response regulator... 249 4e-65 UniRef50_C1A730 NarL family two-component response regulator n=1... 249 5e-65 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 249 6e-65 UniRef50_C4RI73 Two-component system response regulator n=6 Tax=... 249 6e-65 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 248 7e-65 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 248 8e-65 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 248 9e-65 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 248 9e-65 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 248 1e-64 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 248 1e-64 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 248 1e-64 UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10... 248 1e-64 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 247 1e-64 UniRef50_C7MXL4 Response regulator containing a CheY-like receiv... 247 1e-64 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 247 2e-64 UniRef50_C7MI23 Response regulator containing a CheY-like receiv... 247 2e-64 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 247 3e-64 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 247 3e-64 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 246 3e-64 UniRef50_C1YU02 Response regulator containing a CheY-like receiv... 246 4e-64 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_B4WJL3 Response regulator receiver domain protein n=1 T... 246 4e-64 UniRef50_D1XLE6 Two component transcriptional regulator, LuxR fa... 246 4e-64 UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=... 246 4e-64 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 246 5e-64 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 245 6e-64 UniRef50_C8WT63 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_C1XWT0 Two component transcriptional regulator, LuxR fa... 245 6e-64 UniRef50_UPI0001788591 two component transcriptional regulator, ... 245 7e-64 Sequences not found previously or not previously below threshold: UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 254 1e-66 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 248 1e-64 >UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL n=64 Tax=Bacteria RepID=NARL_ECO57 Length = 216 Score = 312 bits (800), Expect = 7e-84, Method: Composition-based stats. Identities = 216/216 (100%), Positives = 216/216 (100%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL Sbjct: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL Sbjct: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL Sbjct: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF Sbjct: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 304 bits (779), Expect = 2e-81, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 134/216 (62%), Gaps = 1/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M++ E TIL+ DDH ++R G+++++ + PD+ VVGEA+ G++ IE+ P +I++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPG+NG+E +R++ I+ ++ + EE ++ L+ G GY+LKD+ E+L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVN-QLTPRERDILKLIAQGLPNKMIARR 179 +Q A G V+ + + ++ + T V+ LT RER+IL ++ G N+ IAR Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L I+E TVK H+ H+ K+ + R +AA++ + + Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 295 bits (757), Expect = 7e-79, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 11/222 (4%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 I+LIDDH + R G+K+++ D VV E S+G++ + L E PD++++D+NMP + Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINMPHV 95 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L E ++++ S+ + E V+ AL+ GA GYLLK+M+ + L++A+ A Sbjct: 96 NGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRVVAE 155 Query: 126 GEMVLSEALTPVLAASLRA-----------NRATTERDVNQLTPRERDILKLIAQGLPNK 174 G L +T L R R + LT RE ++L+L+A G NK Sbjct: 156 GGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGKSNK 215 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+E TVK HV ++L+K+ + R +A V + Sbjct: 216 GIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWV 257 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 293 bits (752), Expect = 3e-78, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 128/213 (60%), Gaps = 2/213 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +L+ DDH ++R G+KQ+I + PDI V+G A++GE+ + + L PD++LLD++MP Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 NG++TL +L++ + +I++ + E + + GA+GY+LKD E E L+KA+ Sbjct: 69 QNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVY 128 Query: 125 AGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G + L L R ++ + ++LT RE ++L L+A+G+ NK I L I Sbjct: 129 QGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFI 188 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E TVK HV ++ KK+ + R +AA++ ++ I Sbjct: 189 SEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 291 bits (747), Expect = 1e-77, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 135/216 (62%), Gaps = 4/216 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH + R G++ ++ PDI +V EAS+G + + A PD++LLD+ MP Sbjct: 85 DPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+E ++E S +I++ ++S+ E D+ A+K GA GYLLK++ +++ A+ Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVH 204 Query: 125 AGEMVLSEALTPVLAASL----RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ ++S ++ L + A + +LT RE ++L+L+A+GL N+ IA++L Sbjct: 205 GGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQL 264 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK HV+++L+K++L SR+EA V+ +E++ Sbjct: 265 FISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLL 300 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 129/216 (59%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N +L++DDH + R G++QLI P I VVGEA+NG+ +++ L PD++L+D+ Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDI 81 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGM+G+ + + ++ +++ ++ + EE V+ A++ GA YL+K+ +PE+LL+A+ Sbjct: 82 NMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 H AA G + L P+L + L+ RE +L+L+AQG N+ IA L Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ ESTVK ++ + +K+ ++ R +A ++ + Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 128/215 (59%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +L+ +DH ++R G+ L+ PDI VVGEA NG + I++ E L PD++L+D++MP Sbjct: 2 NKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NG++ +L++K +I++ S+ + EE + L+ GA GYL+K P DL+KA+H A Sbjct: 62 LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAH 121 Query: 125 AGEMVLSEALTPVLAASLRANRAT---TERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG+ LS +++ + + + R ++ L+ RER++L+LIA+G N+ IA L Sbjct: 122 AGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H H+ KK+ L E + ++ + Sbjct: 182 ISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLV 216 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 289 bits (741), Expect = 5e-77, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 9/221 (4%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P IL++DDHP+ R+G++ + P +VGEA++G + + LA+ L PD+IL+DL++PG Sbjct: 2 SPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNGLE L+ + +++ ++ +E + A++ GA Y KD+EPE L+ + + A Sbjct: 62 MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVA 121 Query: 125 AGEMVLS------EALTPVLAASLRA---NRATTERDVNQLTPRERDILKLIAQGLPNKM 175 GE +++ + + R T+ + LTPRE +IL +A+G NK Sbjct: 122 RGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA+ L+I++ TVK H+ +L+K+ + R +A ++ + Sbjct: 182 IAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWI 222 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 288 bits (740), Expect = 7e-77, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 129/215 (60%), Gaps = 1/215 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ P T+LL+DDHP++R G ++L+ D+ VVGEA +GE+ I A L PD+IL+D++ Sbjct: 10 AHTRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVS 69 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPGMNG+E ++ + I+V + + + V L+ GA GYLLK+ ++LL A+ Sbjct: 70 MPGMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAGE L A+ + ++ T + + L+PRE ++L++ A G NK IAR LD Sbjct: 130 AVAAGESALHPAVARKVLERFSTHQTPTPPE-DALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+VH+ ++ K+ + SR EA ++ + Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWI 223 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 126/219 (57%), Gaps = 4/219 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P ++L DD ++R G + ++S I VVGEA +G + +E+A D++L+D+ Sbjct: 16 TGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQ 75 Query: 62 MPGMNGLETLDKLR---EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP ++GLE +L ++++ + + E+ + AL+ GA G+LLK+ PEDL++ Sbjct: 76 MPKLDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIE 135 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTE-RDVNQLTPRERDILKLIAQGLPNKMIA 177 ++ A G+ +LS +T + A A T R ++LT RE ++L L+A+G N IA Sbjct: 136 SVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIA 195 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R+L + E+TVK HV +L K+ L+ R A V+ ++ I Sbjct: 196 RQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 85/217 (39%), Positives = 133/217 (61%), Gaps = 3/217 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ +L++DDH + R GV ++ P I VVGEA NG + IE ++L PD+ LLD++ Sbjct: 5 QDESVIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIH 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP NGLET K+RE + + +I++ +VS EE + A+K GA GY+LK + PE L++ + Sbjct: 65 MPVCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVR 124 Query: 122 QAAAGEMVLSEALTPVLAASL---RANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 Q GE V+ +L + A R + V +LT RER++L+ ++ G NK IAR Sbjct: 125 QVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIAR 184 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L I+E+TV+ HV+H+L K+ L +R +AA + + I Sbjct: 185 ALFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 286 bits (733), Expect = 5e-76, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 2/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 EP +LL+DDHP+LR G++ L+ VVGEA +GE+ I L SL+PD++++DL MPG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 + G+E L ++ ++V ++S + V AL+ GA GY+LK + D + A+ A Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE V A+ + L +LT RER+IL L+A G N IARRL +++ Sbjct: 137 RGEAVYGPAVARRIRRFLTTG--PESGPFPELTQREREILDLLASGKSNAEIARRLFLSQ 194 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK H+ + K+++ R +A V + + Sbjct: 195 KTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 121/214 (56%), Gaps = 3/214 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +++++D ++R G++ L+ + + VVGEA++G + +E P+++L+D+ MP M Sbjct: 4 PVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMPRM 63 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G++ +++L + ++ + + +E V L+ GA GY+LKD E+L A+ + Sbjct: 64 DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKVHR 123 Query: 126 GEMVLSEALTPVLAA---SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE VL +T + + L A + L+ RE ++L+L+A G N+ IAR L I Sbjct: 124 GEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARALYI 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TE TVK H+ +L+K+ + R +AA++ + Sbjct: 184 TEGTVKNHISSILRKLGFRDRTQAALYALERGWI 217 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 132/218 (60%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ +L+ DDH ++R G+++++S+ P I+VVGE +NG+Q ++ D++L+D+ Sbjct: 1 MNTS--IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDI 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP MNG+E ++++ + + I+ ++ + +E + +K G GY+LKD+ P+ L+K + Sbjct: 59 NMPIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRAT--TERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A GE + +LT + A + +E+ LT RE ++LK +A+G NK IA Sbjct: 119 LGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIAN 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+E TVK H+ ++ +K+ + R +AA++ +E++ Sbjct: 179 ALYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLV 216 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 123/216 (56%), Gaps = 6/216 (2%) Query: 1 MSN--QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M N P +L++DD ++R G+K ++ PD+ VVG+A NG+ +EL L PD++L+ Sbjct: 1 MKNDKSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+G + + + +++V S + + + A++ GA GYLLKDM +L Sbjct: 61 DIRMPEMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELAD 120 Query: 119 ALHQAAAGEMVLSEALTPVL----AASLRANRATTERDVNQLTPRERDILKLIAQGLPNK 174 A+ +G L L AAS AN+ + +++T RE+++L LI G N+ Sbjct: 121 AIRFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNR 180 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 IA++L ITE TVK HV +L ++ LK+R + A++ Sbjct: 181 EIAQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 284 bits (728), Expect = 1e-75, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 131/210 (62%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL++DDH LR ++ ++ D+ VVGEAS+G+ +E E+ PD IL+D+N+PG N Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLPGKN 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +++ + R++VF++ H+E ++ AL+ GADGYLLKD E ++ A+ G Sbjct: 65 GIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRMLYRG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + V+ +T L + + E + N+LT RE++IL + +GL NK IA L I++ T Sbjct: 125 DSVIHPRMTKKLI-TYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYISDKT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK+H+ + KK+ +KSR +A ++ + ++ Sbjct: 184 VKIHINKIFKKLNVKSRSQAVIYAVRNQLV 213 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 282 bits (724), Expect = 4e-75, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 127/214 (59%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ Q P +LL+DD ++R G+K + P+I +VGEA +G+ I A++L PD+IL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP M+G+ ++ ++++ + + E +V A+++GA GYLLK+ PED ++++ Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 QA G + L L L L+ +TPRE+D+LKL+A G N+ I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ITE TVK HV +L ++ ++SR + A+W + Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 282 bits (722), Expect = 8e-75, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +LL++DH ++R G+ + + +VGEA NGE + + PD++L+DL+MP M Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++++ + +I++ S + ++ V+ AL+ GADGY LK+++PE L+ ++ Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G +TP L + E + LT RE+++L+ IA+G NK IA L ITE Sbjct: 134 GNANFHPKVTPALLGR---SAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK HV ++L K+++ R +AA++ + Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 129/223 (57%), Gaps = 7/223 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + ILL DDH + R G+K+++ M D+ V GEA NGE+ ++ + L P++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP +NG+E ++E S +++ ++ EE + +K GA G+LLKD+E L++A+ Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDV-------NQLTPRERDILKLIAQGLPN 173 + G + +T L + R++ ++LT RE++IL+L+AQG N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K I++ L I+E TVK HV ++L+KM + R +A + + + Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVV 226 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 280 bits (719), Expect = 2e-74, Method: Composition-based stats. Identities = 71/207 (34%), Positives = 118/207 (57%), Gaps = 1/207 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DD + R G+ L+ + D++VVG+A +G I L ++L PD+IL+D+ MP + Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ ++ RI+V + + +E + T+L+ GA GYLLK L A+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 L + P + A LR E++ + +L+ RE D+L LI QG N+ I++ L +TE Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK +V +L + ++ R +AA+W Q Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 80/210 (38%), Positives = 133/210 (63%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DDH ++R GV+ + DI VVGEA+NG++ +E+ L PD+IL+D+ MP M+ Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMPVMD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + ++R++ L GRI+ + ++ + A+K GA GYLLKD P++LL+A+ + G Sbjct: 65 GIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRVHRG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E L+ + + + L +E + LTPRE D LKL+A+G NK IA + ++E+ Sbjct: 125 EPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFVSEA 184 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ H+ +L K+ L +RVEA ++ +E I Sbjct: 185 TVRTHMTSILSKLHLANRVEATLYALREGI 214 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 128/209 (61%), Gaps = 2/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DDH ++R G++ + + DI VVGEAS+GE+GI AE L PD+IL+D+ MPG + Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKMPGTD 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E L +LRE + R+++ + + VV AL+ GA GY+ KD++P+ L A+ AG Sbjct: 68 GIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSVHAG 127 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 ++L + L + ++ + LT RER++L IA G N+ IAR L ++E T Sbjct: 128 HVLLQPEVAVALLT--QDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEKT 185 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK HV ++L K+ + R +AA+W + I Sbjct: 186 VKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 123/208 (59%), Gaps = 1/208 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I++ DDH ++R G++ + DI VVGEA+ G + + + E PDL+L+DL+MP M+G Sbjct: 2 KIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + K ++ I+V + + +E V+ AL+ GA Y LKD EPE+L+K Q GE Sbjct: 62 IQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGGE 120 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 LS A+ P + ++ + QLT RE+D+L IA G NK IA L I+E TV Sbjct: 121 YKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 K HV ++L K+++ R +AA++ + + Sbjct: 181 KTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 127/243 (52%), Gaps = 27/243 (11%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ P +LL+DD P+LR G + ++ D+ +VGEAS+G + I +DPD++L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+E + ++++ + + +E L+ GA +LLKD+ P +L+ A+ Sbjct: 61 RMPVLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATT---------------------------ERDV 153 A+G+ V++ +T L + + + Sbjct: 121 RVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLL 180 Query: 154 NQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 LTPRE ++L+ +A+GL N IA R ++E+TVK HV+ +L K+ L+ RV+A V+ ++ Sbjct: 181 EALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYET 240 Query: 214 RIF 216 + Sbjct: 241 GLV 243 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 279 bits (715), Expect = 5e-74, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 14/228 (6%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N+ I++IDDH + R GVK++++M P+ VV + +GE +EL E +PD+IL+D+NM Sbjct: 6 NENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG+E L ++ +++V S+ + E V LK GA GYLLK+M+ + L++A+ Sbjct: 66 PKVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKV 125 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQ--------------LTPRERDILKLIA 168 A G + +T L R E++ ++ LT RE ++L+L+ Sbjct: 126 VAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMT 185 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 G N+MI L I+E TVK HV ++L+KM + R +A V + Sbjct: 186 DGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWV 233 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LLIDDH M+R G+ + PDI V+GEAS+G +G+ LA L PD+IL+DL M GM+ Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ + +I+V + ++ V ++ GA YLLK + ++ A+ A+ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E L + + + LR + LT RE +IL LIA+G NK I L IT T Sbjct: 122 EPKLESKVAGKVLSRLRHSGENA-LPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ ++L K+ + R +AAV+ H+ + Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 278 bits (714), Expect = 6e-74, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 126/214 (58%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + P +L++DDHP++R G++ + VVGEAS+G Q + A PD++L+DL M Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M G+E + +LR + + R++V + + E DV+ A++ GA GYLLKD EDL++A+ Sbjct: 68 PTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRA 127 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AAAG+ VL+ + L ++ A + LT RE ++L+L+A G N+ AR+L I Sbjct: 128 AAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFI 187 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +E+TVK H+ H K ++ R A ++ + Sbjct: 188 SEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 130/212 (61%), Gaps = 5/212 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH ++R G+ +L+ + DI VVGEA +G + ++ PDL+LLDLNMP Sbjct: 2 KPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPR 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M G+ + K++E S ++++ ++ + EE V ++ GA+GY+ KD++PE+L +A+ + Sbjct: 62 MGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVI 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ V + + + +V +L+ RE+++L+L+AQG+ NK IA+ L I+E Sbjct: 122 KGDKVFPRSTENEV-----REVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISE 176 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV ++L+K+ + R +A + + + Sbjct: 177 KTVKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 9/215 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ IL++DDH ++R G+ L++ P V+ EA +G + I L PD+ ++DL Sbjct: 5 THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLR 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 +P MNG+E + ++RE+S RIVV + + +ED+ AL+ GA GYLLK M+ +DL A+ Sbjct: 65 LPRMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIR 124 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG+ + + LA + ++LT RE D+L+LI QG N+ IA L Sbjct: 125 SVHAGKSRIPTVVAERLAERMSG---------SELTARELDVLRLIVQGRSNREIAADLH 175 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK H+ ++L K+ + R +AA Q + Sbjct: 176 ISEATVKTHINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 122/223 (54%), Gaps = 7/223 (3%) Query: 1 MSNQEP----ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLI 56 M+ P +L++DD P++R G+ ++S P VVGEA NG Q + LA L PD++ Sbjct: 1 MTGTGPTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVV 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 ++D+ MP ++G+ +L R++ S + +E VV AL+ GA G+L KD PEDL Sbjct: 61 VMDIRMPVLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAA---SLRANRATTERDVNQLTPRERDILKLIAQGLPN 173 A+ AGE ++ L L + T + +LTPRE ++ +L+A GL N Sbjct: 121 SAAIRTVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+R LDI+ STVK ++ + K+ ++ R +A + ++ + Sbjct: 181 TGISRTLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 E +L+ DDHP+ R G++ L+ + VVGEA +G Q ++LA L PD++++DL+ Sbjct: 5 PGNEAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLH 63 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG NG+E + S ++V ++ ++ V A++ GA GYLLK+ E++ +A+ Sbjct: 64 MPGGNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVR 123 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAGE + + + + +LT RER++L+LIAQG N IA+ L Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++ TV+ HV ++ K+ + R +A V + + Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 275 bits (706), Expect = 5e-73, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + +IL+++D ++R G++ ++ + I VVGEA +G +G+ A L PD+IL+D+ Sbjct: 1 MQQSD-ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDV 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP MNG+E + + RI+V + + ++ V +++ GA GYLLKD E LL+ + Sbjct: 60 QMPVMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + AGE+ + + R L+ RER++L L+AQGL N+ IA RL Sbjct: 120 RRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRL 179 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ITE TVK HV ++L K++ ++R +AA +E + Sbjct: 180 SITEGTVKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++ + L DD P++R G + +I+ D+TV GEA +G I LA+ PD+IL+D+ M Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +G+E + + +IV+ + + EE V ++ GA GYLLKD PE+L+ A+ Sbjct: 62 PRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRA 121 Query: 123 AAAGEMVLSEALTPVLAAS--LRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AA GE + + + + E T RE ++L+ +A GL N+ IA +L Sbjct: 122 AARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ESTVK HV +L+K + R +A V+ + I Sbjct: 182 FVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 6/218 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P +L+ DD ++R G + L+ PD+TVV EA++G + + L PD++L+D+ MP Sbjct: 24 SPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIRMPV 83 Query: 65 MNGLETLDKLREKS--LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 MNGLE + + I+V + + +E V AL+ GA G++LKD +PE+LL A+ Sbjct: 84 MNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAAIRT 143 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDV----NQLTPRERDILKLIAQGLPNKMIAR 178 AAG+ +L+ +T L A+ A + + LT RER +L IA G N IA+ Sbjct: 144 VAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAEIAQ 203 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L ++ STVK HV H+L K+ + R + + ++ + Sbjct: 204 ALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 275 bits (704), Expect = 8e-73, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++LL+DDH + R ++ L+ PDI V+GEA +G +LAE PD+IL+D++MPG++ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ L+ + +I++ ++ + V+ A++ GAD YLLK+ E ++ A+ A G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 127 EMVLSEALTPVLAASLRA-NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E V+ L L R + E V LT RE +L+L+A G+ NK IA L + ES Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK + + +K+ +K R +AA++ + Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS +L+ DDH + R G+ +I+ P++ VV +A NGEQ I L E PD+ L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP + G+ + + + S RI+V + + +ED+ L+ GA GYLLK+ EP++LL A+ Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G + + L L +L+ RE ++L+ +AQG+ N IA L Sbjct: 121 RTVHRGHKYIPPDVGAKLVQRLSNP---------ELSERELEVLRSLAQGMSNADIADAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I E TVK HV +L K+ + R +A + + I Sbjct: 172 SIGEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 274 bits (702), Expect = 1e-72, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 129/214 (60%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+++DD ++R+G+ ++ DI VV E +NG + IE A+ PDLIL+D+ MP M+ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 GLETLDKLR-EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GL + + ++ RIV+ S + +E + AL+ GA G++LKD P++L+ A+H A Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 126 GEMVLSEALTPVLA---ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G +L+ ++T L A L+ + +++LT RE++ILK +A G N IA RL I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ESTVK HV +L K++L+ R +A ++ ++ + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENGVI 216 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 125/213 (58%), Gaps = 8/213 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 ILL DDH ++ G+ ++M PD +VGEA NG++ +E A L PD++L+DLNMP M Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++E+ +++V + + +V AL+ GA GY+LKD+EP+ L +A+ A Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 126 GEMVLSEALTPVLAASLRA--------NRATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 G + L ++ L + + ++ + LTPRE ++L+L+ +GL NK IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 + L + E TVK HV +L K+ L R +AA++ Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +++DD ++R G+ L+++ ++ VVG A++G++ + +AE L P++IL+D+ MP +NG+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 +RE+ ++++ + N E + AL++GA GYLLKDME + +++A+ AG V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 LSEALTPVLAASLRANR------ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 L + +T + L+ + + V QLT RE D+L+ I GL NK IA +L IT Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV +++ K++L+ R +AA++ + I Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGI 212 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS P ILL DDH M R G+++L+ +VGEAS G + + A +L PD++LLD+ Sbjct: 1 MSTM-PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDI 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+ +L + ++++ ++ ++ + A+K GA YLLKD + ++L+ + Sbjct: 60 QMPEIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + GE L +T + R R + ++D QLT RERDIL L+A+G N+ IA+RL Sbjct: 120 ERVHRGEAALDPTVTLRVFDEFR--RLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRL 177 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++E TV + + +K+ + +R +AA+ Q + Sbjct: 178 FLSEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 272 bits (697), Expect = 6e-72, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 139/210 (66%), Gaps = 3/210 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DDH MLR GV ++S D+ V+GEASNG++ +EL L PDL+L+D+NMP ++G Sbjct: 2 KVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDG 60 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E KL++ ++V+ +VS ++D+ A+K GADGYLLK++ PE+L+ +L A +GE Sbjct: 61 VEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGE 120 Query: 128 MVLSEALTPVLAASLRANRA--TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 +S + + R RA T ++ QL+PRE ++L+L + GL K IA +L + ES Sbjct: 121 APISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAES 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK H++H+L+K+ L++R EA + + + Sbjct: 181 TVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 118/212 (55%), Gaps = 6/212 (2%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 ++ DD ++R G+ L+ + P I VVG A +G++ + L PD++L+DL MP +G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++R++ ++VV + ++ + TAL+ GA GYL KD E++++A+ +GE Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 130 LSEALTPVLAASLRANR------ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 LS + L + + A + LTPRE ++L LIA+GL N+ IAR L ++ Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TVK H+ ++ K + R +A + + + Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 124/216 (57%), Gaps = 7/216 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++RTG+ L+S DI VVG+A NG + +EL SLDPD++L+D+ MP M+ Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E KL E+ +++ + + +E V+ ++ GA GYLLKD++ L ++ A G Sbjct: 63 GVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAGG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQ-------LTPRERDILKLIAQGLPNKMIARR 179 ++ + L L + T + LTPRERDIL+L+AQG N+ I + Sbjct: 123 GALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGEQ 182 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L ++ TVK H+ + K+ ++ R +AA+W + + Sbjct: 183 LALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHLL 218 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 131/209 (62%), Gaps = 2/209 (0%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 L++DD + R G+ L+ I VVGEA +G +G LA + PD++LLD+ MP +G+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++E S +I++ +VS+ E D+ A+K GA GYLLKD E++ +A+ A G+ + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 130 LSEALTPVLAASLRANRATTERDVN--QLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +S ++ L + V +LT RE ++L+L+A+G+ N+ IA+ L I+E+TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV+++L+K++L SR+EA ++ +E++ Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLL 210 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++LL+DDH + R G+ L+S PD TVVGEA++GE+ +E A L PD++L+D+++PG++ Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +++ + R+V+ +V + E + ++K GA GYL+K++ +LL L A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 127 EMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 E +S + + E L+PRE ++L+L+A L NK IA RL I+E Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+K++L K++L SR +AA + + Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 271 bits (695), Expect = 1e-71, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 121/213 (56%), Gaps = 2/213 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ++++DDH ++R G + ++ PD VVGEAS+G + IEL L PD++++DL MPG+ Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GLE +++E+ ++V + E ++ ALK GA GY+LK ++ AL + + Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 126 GEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE L++ L L L R +LT RER++L L+A+G N IAR L I+ Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T K HV+++++K+ + R +A + + Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLI 222 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 6/216 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELA----ESLDPDLILLDL 60 ++++DDH M+R G+K + P V+ EA +G + +EL PD+IL+DL Sbjct: 11 SKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDL 70 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPGMNG E ++R + +IV+ + ++ VV A++ GA Y+LK + E+L+ AL Sbjct: 71 MMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELIYAL 130 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G V++ + L LR T + D + +T RE+++L LIA+G NK IA L Sbjct: 131 QGAYRGMPVMTGEVAQALTRGLRQR--TVQGDDSGMTEREKEVLLLIAEGKSNKDIAEEL 188 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TVK HV ++L K +L+ R + A++ H++ Sbjct: 189 HISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 8/222 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+++ I+L DD + G+K L+S+ + +VGE NG++ +E L P ++L+DL Sbjct: 1 MTDR--IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP M+G+ ++++ ++ + + +E V ALK G+ GYLLKD + L++A+ Sbjct: 59 NMPVMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTE------RDVNQLTPRERDILKLIAQGLPNK 174 ++GE L ++ + A + L+ RE +L +++G NK Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA LD+ E TVK HV ++L K+ + R +AA+ + Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 9/218 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R G+K ++S+ +I V+GEA NGE+ I L ++ D+IL+D+ MP ++ Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++E+ + ++++ + N +E + A+K GADGYLLKD+ E ++ A+ G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNKMIA 177 M+L +T + + + ++ +N LTPRE D+ KL+AQG NK I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 R L +TE TVK +V +L K++L SR E AV+++Q I Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ILL DDHP+L + + D+TV+G A +G + +EL PD+ L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M G + + + K RIVV + + +ED+ L+ GA GYLLK EP +LL A+ Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ + + LA + + +L+ RE ++L+LIA+G N+ I+ L Sbjct: 123 RTVHKGQKYIPPTIAAKLAERMSS---------EELSDRELEVLRLIAKGKNNQQISNVL 173 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +I ESTV+ H ++ K+ + R +A V I Sbjct: 174 NIAESTVRFHTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 2/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R G+ ++++APD+ V+ ASNG + ++L+ + PDLIL+DL MP MN Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ +I+V + + +E + A++ GA GYLLKDM DL+ A+ +G Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 127 EMVLSEALTPVLAASLRANR--ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + + +T L + + +R + +LT RE +L LIA G N IA +L ++E Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ HV +L K+ + R +AA+ + + Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 26/242 (10%) Query: 1 MSN----QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLI 56 MSN EP I L+DD P+LR G LI D++VV +AS+G++ ++LA D+I Sbjct: 1 MSNPEQESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDII 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+D+ M +NG+ +++ + ++++ + + V A+ GA G+LLKD+EPE+L Sbjct: 61 LMDVQMARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRATTER----------------------DVN 154 L A+ +GE VLS +T + +R+ R Sbjct: 121 LSAIRTVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSA 180 Query: 155 QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +LTPRE DIL+L+A G N I+ ++ +TVK HV+H+L K + RV+A ++ + Sbjct: 181 ELTPREMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHG 240 Query: 215 IF 216 + Sbjct: 241 VV 242 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 ILL DDH + R GV+ L++ D+ V GEA+N + LA+ L PD++L+D+ M G Sbjct: 2 SKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+ E +R++ +++ S+ + E+ + + GA+GY+LKD + L+ A+ + Sbjct: 62 MSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQ 121 Query: 125 AGEMVLSEALTPVLAASLR---ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 G LS L L R T LT RER+ILK++A+G K IA + Sbjct: 122 RGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFE 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ H ++++K+ + ++ + + Q++I Sbjct: 182 LSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKII 216 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 129/218 (59%), Gaps = 2/218 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + +LL DDH ++R G ++LI + VVGEAS+G + +E++ + PD++++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +NG+E ++++ + I++ + E+ ++ L+ GA +LLK+++ LL+A+ Sbjct: 61 AMPRLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AGE VL + T + L +A + VN LT RE ++LK+ A+G+ NK IA Sbjct: 121 RAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIAD 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +L ++ T++ H+ ++ KK+ + SR EA ++ + F Sbjct: 181 QLYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGWF 218 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL++DDHP++R G+ ++ D+TVVGEA +G+Q ++ L PD++L+DL MPG + Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + +++ + R+VV + + +E ++ A++ GA GYLLK ED+ +A+ G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +L + L + + E +LT RE D+L L+A+GL NK IA L ITE T Sbjct: 122 GSLLEPVVAGKLLNRM-GDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H + +K+ + R EA Q + Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 6/220 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP----DLI 56 M+ ++++DDH M+RTG++ + + P VV EA +G+ I + E+ P D+I Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+DL MPGM+G+ET +L + + +I++ + ++ V A++ GA Y+LK + E+L Sbjct: 61 LMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMI 176 + ALH A G V++ ++ L LR T + +LT RE+++L LIA+G NK I Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQR--TAQSGDEELTEREKEVLLLIAEGRSNKEI 178 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ TVK HV ++L K +L+ R + AV H++ Sbjct: 179 GEELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M +P IL++DDH ++R+G+ + + D+ VVGEA N + + PD++L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +PG NG LR + R+++F+ + EED+ A++ GA GYLLK E+LL A+ Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAGE LS AL LA + A + RER++L+LIA+G NK IA L Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV---------SDREREVLQLIARGKANKEIAAAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E TVK H ++ KM + R +A + + Sbjct: 172 GISEETVKRHASNLFVKMGVADRAQATSEGIRRGLI 207 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 75/216 (34%), Positives = 115/216 (53%), Gaps = 5/216 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES-----LDPDLILLDL 60 ILL DDH ++R GV+ ++ PD+ VVGEA +G + IE + DL +LD+ Sbjct: 27 KTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLDV 86 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M GL+ +L RI++ ++ ++E+ + ALK GA GY+LK + DL++A Sbjct: 87 AMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQAC 146 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A GE L VL S E LTPRE +ILKL+A+G ++ IA L Sbjct: 147 RAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIADTL 206 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H ++L K+ +K R+E + + + Sbjct: 207 FISVKTVERHRANILAKLGMKDRLELTRYAIRTGLI 242 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 75/222 (33%), Positives = 124/222 (55%), Gaps = 11/222 (4%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESL--DPDLILLDLNMP 63 P + L+DD M+R G + +I PD+TVV EA +G + + + +L D++L+D+ MP Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+GL L + + R+VV + + +E V+ A++ GA G++LKD PE++L A+ Sbjct: 69 RMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIRTV 128 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNK 174 AG+ V++ + T L L T D + LT RER++L+L+A+G N Sbjct: 129 HAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRSNT 188 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L + E+TVK HV +L K+ + RV+A V ++ + Sbjct: 189 EIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVV 230 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 2/214 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + ILL DDH ++R G++ L+ P V+G+A++G + LA PD++++D+ MPG Sbjct: 2 KTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NG+E ++ K IV S+ + E V+ ALK GA YLLKD DL+ A+ + Sbjct: 62 LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVS 121 Query: 125 AGEMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G+ S A++ +L E LT RER++L+L+A+G NK +A L++ Sbjct: 122 EGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H ++L+K+ L S E ++ ++ + Sbjct: 182 SLYTVETHRGNILQKLNLHSGAELILYAIRKGVI 215 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 126/216 (58%), Gaps = 4/216 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N+ +++ DDH + R G+K L+ +VGEASNG++ +EL +L PDL+L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MP M GL+ + + S +++V + S ++D+ A+K GA G++ K++E E+ + L Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGL-PNKMIARR 179 GE ++ L L +R + LT RE++IL+L+ G+ K ++R+ Sbjct: 1552 RNVIRGEPAITPRLAGKLIDEF--SRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQ 1609 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L ++E TVK H++++L K+ L+SR + W Q + Sbjct: 1610 LGVSEHTVKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 68/221 (30%), Positives = 125/221 (56%), Gaps = 5/221 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 ++ E +L++DD ++R G K ++S + VVGEASNG + E + +L P ++L+D+ Sbjct: 37 VNTSETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDI 96 Query: 61 NMPGMNGLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP +G+ K+ R++V + + +E V AL+ GA G++LKD EP+D+++ Sbjct: 97 RMPVEDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVR 156 Query: 119 ALHQAAAGEMVLSEALTPVLAASL---RANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 A+ AAG+ ++ ++T L + R + + LT RER+IL+ +A+G+ N+ Sbjct: 157 AVRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEE 216 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+ +TVK H+ ++ K+ R + V ++ + Sbjct: 217 IADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLV 257 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES-LDPDLILLDLNMPGM 65 ++L+ DD P +R +K L+ M PDI V A +GE+ + L L D++L+D+ MP Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++RE+ R+++ + + ++ +V AL+ GA GYLLK++ P+ +++ + Sbjct: 62 DGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIARRLD 181 G M++ + L LR R LTP E+ ++ LIA+GL NK IA +L Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 ++E TVK +V +L K+ L+ R + A++ ++ Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIFYLKK 213 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 114/215 (53%), Gaps = 6/215 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GMN 66 I++ DDH ++RTG +++ D+ VV A++G + + PD+++LDL+MP G + Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL K+ E +I++ ++ + EE + LK GA GY+LK+ E L+ A+ G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 127 EMVLSEALTPVLAASLRANRATTE-----RDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 E + LT L T E L+ RE +IL LIA+G NK IA +L Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ H H++ K+ LKS+ E + ++++ Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLL 216 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 267 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 116/208 (55%), Gaps = 2/208 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+L+DDH ++R G++ L+ PD+ VVGEAS+GE+ ++ L PD++L+D+ MP M Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L +R ++ R+V+ + + + VV AL+ G G+LLKD+ + L A+ + A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 127 EMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 E +L + + LT RE ++++LIA+GL N+ IA L E Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK ++L K+ ++ R A + + Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAME 209 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 116/212 (54%), Gaps = 3/212 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P ++++DDH ++ G + P+I VV ASNG + +EL + PD++L+D++MP Sbjct: 7 KPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMPI 66 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNG+E ++E+ ++++ ++ ++ E ++ ++ GA GY+LK++ +++A+ Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTVH 126 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G E+ T L N L+ RE IL+++AQG +K IA L+I+ Sbjct: 127 QGATYFCESTTSTL---FSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISY 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++ K+ + S E A + Q + Sbjct: 184 RTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 119/210 (56%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDHP++R G+ ++ D VG+A++G+Q + L E PD++LLDL +P ++ Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + R + + R +V + + +E + AL GA GYLLKD PE++ +A+ G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + + L A ++L+ RE D+L+L+ +G NK IA L+I+E+T Sbjct: 122 GAALQSGIAARVLKRLATEPAE-----DELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +K HV H+ K+ ++SR EA Q + Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 127/210 (60%), Gaps = 2/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DDHP+LR G+++++ I VV E +G+ I ++ +LD D++L+DLNMPG+N Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE +R ++ + I+V +V + +E V L+ G GYLLKD++P+ L+ ++ + +G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +LS A+T L L T RD L+ RE IL + +G N+ I + L I+E T Sbjct: 122 QPILSPAVTGKLLGQLVH--PTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + +K+ ++ R +AA+ + ++ Sbjct: 180 VKNHLSSIFRKLAVEDRTQAALKAVKLKLV 209 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 5/214 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P +LL+DDH ++R G++ +S+ I VVGEA+NGE+ + AE L PD++++DL Sbjct: 5 TPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLM 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M+G++ LR + ++ + + E V A+ GA GY+LKD + L A+H Sbjct: 65 MPVMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AA GE+ L L R T LTP+E +L+LIA+G N+ IAR Sbjct: 125 AAARGEVRLHPEAARRLVRDFR-----TPEMRETLTPKEVIVLQLIARGYSNRDIARDQG 179 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TE+TVK HV +L K+ L+SR +AA++ + + Sbjct: 180 VTEATVKTHVSRLLGKLGLESRTQAALYALRHGL 213 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 266 bits (681), Expect = 4e-70, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 12/228 (5%) Query: 1 MSNQE--PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 MS++E P + L+DD ++R+G+ L+ PD+TVV EA +G + + D++L+ Sbjct: 1 MSSEETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+G+E L + + R+VV + + +E A++ GA G+LLKD PE+LL Sbjct: 61 DVRMPEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLA 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLR----------ANRATTERDVNQLTPRERDILKLIA 168 A+ G+ V++ + T L + A + V LTPRER++L L+A Sbjct: 121 AIRTVHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMA 180 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 QG N IA L ++E+TVK HV +L K+ + RV+A + H+ + Sbjct: 181 QGAANLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLV 228 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD P++R+ ++ +++ D+ + GEA GE+ + L L PD++L+DL MPGM Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ S R++V + + ++ V AL+ GA G+L+K+M +D+L A+ A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 127 EMVLSEALTPVLAASL---RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +L+ ++T L + R R ++ +T RER++L L+ +GL N IA L ++ Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TVK ++ +L K+ + RV + ++ + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEAGL 214 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 117/210 (55%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R G+ ++ + DI V+GEAS GE+ + +A+ L PD++ +D+ MPG + Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE ++++ + ++V + + +E V AL+ GA G LLKD DL++ + +AA G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E ++ +LT + A ++ LTPRE D + + QG+ N IA L + ST Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + K +RV+ +W + + Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRNGVV 214 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 107/211 (50%), Positives = 149/211 (70%), Gaps = 1/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P + LIDDH + R GV Q+I P VVGEA++G +G+ LA L PD++L+DLNM G Sbjct: 22 SPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMKG 81 Query: 65 MNGLETLDKLR-EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +NG+ETL + + E SL R VV +VS+ E+D++ AL+ GADGYLLKDMEPEDL +L + Sbjct: 82 LNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKKV 141 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +G V+ ++LT VL +L R D LT RE++IL+ +A GL NK IAR+L I+ Sbjct: 142 ISGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGIS 201 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ++TVKVH+KH+L K+KL SR+EAAVW H+++ Sbjct: 202 DTTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 58/215 (26%), Positives = 117/215 (54%), Gaps = 6/215 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R ++ ++S DI VVG +G++ +E + PD+IL+D+ MP M+ Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++E+ +I++ + + +E + +ALK GA GY+LK + E+L +A+ G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 127 EMVLSEALTPVLAASLRANRAT------TERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 +++ + + + TE ++ ++ E I++ I G+ NK IA +L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++E TV+ ++ +L K+ L+ R + A+W Q + Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTGV 216 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 10/223 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +L+IDDHP+ R G++ + A D+ VVGEA NG++ I+LAE L PD++L+D+N+P Sbjct: 2 EQRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G+NGLE ++ + ++V SV ++ + A+K GA Y KD+ P DL++ + + Sbjct: 62 GLNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREV 121 Query: 124 AAGEMVLS------EALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPN 173 A G+ +++ + + R AT + LT RE +IL IA+GL N Sbjct: 122 ARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSN 181 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K IA +L I+ TVK H+ +L K+++ R A ++ Q Sbjct: 182 KEIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GM 65 + + DDH ++R G +I+ D+ VVGEA++G++ +L ++P ++LLD++MP G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NGL +++ S RI++ ++ + + L+ GA GY+LK+ E LL A+ + A Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 126 GEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE + + L+ L E+ ++L+ RE +I L+AQG NK A +L I+ Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H + K+ + SR E + + Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLALKYHLL 213 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I++ DDH M+R G+K L+ + DI V+ EA NGE ++ ++ PD++LLD+NMP MN Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L L+++ +++V +V N E ++ A+ G +GY+LKD E +L KA+ A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E + +L P L + + + E ++ LT RE ++LK +A G N+ IA+ + I+E T Sbjct: 123 ETYIQPSLIPALNSKM-IQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + KK+++ R +AAV+ + I Sbjct: 182 VKNHISSIFKKLEVTDRTQAAVFAIRNNII 211 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +I+L DDH ++R G+K L+ D VVGEAS+G + + L ESL P +++ DL M GM+ Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ ++S +V+ S+ +E V AL+ GA Y+LKD E+L++++ +A G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 127 EMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 LS L+ + ++ AT+ LT RER++L L+AQG IA RL I+ Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VH +M++K+ L+++ + + Q I Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 79/218 (36%), Positives = 124/218 (56%), Gaps = 8/218 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL DDH +LR G+K++++ D+ VVGEA +G++ + L PD++LLD+NMPG+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL+ +L++ +I+ ++ + + V+ LK GA GYLLKD+EP L+KA+H G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 127 EMVLSEALTPVLAA--------SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 + L L A E +LTPRE D+L IA+GL N+ I + Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L ++E TVK H+ + K+K+ R +A V+V + +I Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIV 220 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 117/210 (55%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+DDH M+R G+K +++ PD+ VV EAS+GE+G+ A + PD++++DL MP M Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPKMT 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E L ++ +IV+ + E + L+ GA GY+LK +++L A+ + A G Sbjct: 64 GVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVALG 123 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E + + + R + LT RER+IL L+A+G N+ IA I+ T Sbjct: 124 EYAIETEVEKKVEHHKRH-----PDLHDDLTAREREILTLLAKGYDNQRIADESFISLKT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV ++L K+ + R +A V+ Q + Sbjct: 179 VKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 72/222 (32%), Positives = 124/222 (55%), Gaps = 7/222 (3%) Query: 1 MSNQEPA--TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M+ P I+++DD ++R G++ ++ P ITVV E ++GE+ + L + PD++L+ Sbjct: 1 MNTAAPTQRRIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP +GL + + ++V + + +E +V AL+ GA G+LLKD P DL++ Sbjct: 61 DIRMPVRDGLSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVR 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRAT-----TERDVNQLTPRERDILKLIAQGLPN 173 A++ A G LS ++T L A + T R V QLT RE D+ + IAQG N Sbjct: 121 AVNLAGDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + I++ L ++ TVK H+ + K + +RV+ A+ +H + Sbjct: 181 QEISQTLYMSIPTVKTHISRIFTKFDVDNRVQIAIRMHDAHL 222 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 112/210 (53%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L DDH +LR G+ L+S D TVV EASNG + +E A P + ++D++MP +N Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + ++ +K +I+V ++ +E V+ ++ GA GYLLKD E+L+ A+ A G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + S+ VLA + LT RER++ L+ G K IAR LDI+ T Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + H +L K+ + + E + + + Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 Q IL+ +DH ++R G+K LIS + VVGEA NG IE+ PDLILLDL+M Sbjct: 2 TQSTIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNGL T+ +L+++ +I+V ++ ++ ++ ALK GADGYLLK +P++L A+ Sbjct: 62 PKMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRA 121 Query: 123 AAAGEMVLSEALTPVLAAS-LRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 G+ LS L+ L S + + + LT RE+++ +L+A+G N+ IA L Sbjct: 122 IMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV H +++KK+ L S E + + + I Sbjct: 182 ISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 126/223 (56%), Gaps = 7/223 (3%) Query: 1 MSNQEP---ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 M + P T+L++DD P++R G++ ++ P + VVGEA +G + A L PD+ L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDLNMPGMNGLETLDKLRE-KSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 +D+ MPGM+G+E + +VV ++ + +E V AL+ GA G +LKD +L Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRAN---RATTERDVNQLTPRERDILKLIAQGLPN 173 + A+H AAAG+ +LS ++T L R +LT RERD+ +L+ QGL Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 A RL + +STVK HV+ + +K+ ++ RV+A ++ ++ + Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLV 223 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GM 65 ++L+DDH ++R G++ L+ DI VVGE + + LAE P+++++DL + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L EK ++V+ S+ + EE V AL+ GA GY+LK E+L A+ A Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 126 GEMVLSEALTPVLAASLRANRA---TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE L + + L+ + + +LT RE ++L+L A+GL N IARRL I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H ++++K+ L RV+ + + I Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGIL 216 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 121/212 (57%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 E +L+ DDH M+R G++ + + I V GEA++G + E A L+PD+ILLDL MP Sbjct: 5 PEVIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMP 64 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++G+ ++ LRE + R++V + ++ A++ GA GY+ KD++P L A+ Sbjct: 65 GVDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG ++L + L S A LT RER++L LIAQG N+ IAR L + Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV ++L K+ + R +AA+W + I Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 263 bits (674), Expect = 2e-69, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 120/216 (55%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 ++ P +L+ DDH ++R G++ ++ P I VVGEASNG ++LA PD+++LD+ Sbjct: 5 VAPTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDI 64 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +GL+ +LRE R+++ S+ + E V ++ G GYLLKD E+L A+ Sbjct: 65 TMPEESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAI 124 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AG S A+ L ++ + ++ LTPRERD+L +A+GL NK IA L Sbjct: 125 RAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAEL 184 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H + +++K+++ S + + I Sbjct: 185 GISRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 124/210 (59%), Gaps = 4/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDHP + G+K ++ I +VG + NGE+ I+ L+P++ ++DL +PG+N Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++++K+ +++ S N E++V+ A+ GA Y++KD PE L++A+ A G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E VL+ + + A R LTPRE+++L + +G N+ IA+ L I+E+T Sbjct: 122 EPVLTPGVAKKIMKR----AARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISETT 177 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV ++LKK+ +K R +A + + + Sbjct: 178 VKTHVSNILKKLDVKDRTQAVIKAIENNLV 207 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S+ +L++DDH + R G+ +++ P I VVGEA NG ++ DL+++DL Sbjct: 9 SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQ 68 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP ++G+E +++ + I++ +V + ++ AL+ G GYLLKD +++ A+ Sbjct: 69 MPVIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVR 128 Query: 122 QAAAGEMVLSEA-LTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Q GE L+ + L A + LTPRE+ +L+L+ QG N+ IAR L Sbjct: 129 QVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAREL 188 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TVKVHV+H++ K+ + R +AAV + + Sbjct: 189 IISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 13/223 (5%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I ++DDH + R G+K++ + + TVV E G + I +A P+++++D+NMP MN Sbjct: 6 TRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMN 65 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L S R+++ S+ + E + AL+ GA G+LLK++ +L+ A+ A Sbjct: 66 GIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKD 125 Query: 127 EMVLSEALTPVLAASLRA-------------NRATTERDVNQLTPRERDILKLIAQGLPN 173 L +T + R T + L+ RE ++L L+A G N Sbjct: 126 GAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSN 185 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + I+ L I+E TVK HV +L+KM + R +A V + Sbjct: 186 RDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWV 228 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH ++R G++ L+ + VV EA NG++ I LA L P++I++D++MP MN Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ K+ +++ S+ V+ L+ GA GYLLKD E+L+ A+ + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 LS + ++ + A T V ++LTPRER++L+L+A+GL K IA L ++ Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ H +++ +K+ + S E + +E + Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 5/215 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R G + +S P+I VVG A G + E +L PD++L+D+ MP + Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL ++ + R++V + + +E V AL GA G+LLKD +PE+L A+ A G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 127 EMVLSEALTPVLAASLRANRATT-----ERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 VLS LT L + + L+ RE D+++L++QGL N IA L Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + +STVK H+ ++ KK+++++RV+ +W ++ + Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DDH ++R G++ ++ + +I VVGE +NG + + LA L PD++L+DL MP M+ Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++R+ +V + S + V+ A++ GA G+LLK+ E +DL A+ AAAG Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 ++ +S A L +R QLT RE ++L ++A+G NK IAR L I + T Sbjct: 123 QIHVSPAAISRLMGQVREPSGP-----EQLTERETEVLTMLARGKANKEIARDLRIGQQT 177 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK +V H+L K+ + SR +AAV+ Q + Sbjct: 178 VKTYVSHILTKLGVHSRTQAAVYAVQSGLV 207 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DD ++R G++ L A DI VVGEA G+ + LA L PDL+L+DL MPGM+ Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++ + S R+V + + ++ + AL GA G+L+KD P +LL+A+ +AA G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 127 EMVLSEALTPVLAAS-LRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + S + + S +RA + + +LT RER++L L+ G N IA RL + + Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK H+ ++ K +RV AV + Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 4/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L +DDH M+R G+ +S DI VVGE ++G++ I A L PDLIL+DL M M+ Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++++ ++++ + +++V AL G D Y+LK +D+ A+ + + G Sbjct: 63 GVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSRG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E V + + ++ LT RE +IL LIA+G N+ IA IT T Sbjct: 123 ESVFEPEVLVKMRNRMKKR----AELYEMLTEREMEILLLIAKGYSNQEIASASHITIKT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV ++L K++++ R +A ++ Q + Sbjct: 179 VKTHVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 1/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 I+L DDH + R G+++L+ M D+ V+GEA +G+ +E+ +L PD++L D++MP Sbjct: 2 RKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPK 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G++ + L+ S R V + + ++ + G D Y+LK +LL A+ Sbjct: 62 KDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G + + L ++ R +++LTPRE ++L I+QGL N IAR++ ++E Sbjct: 122 RGHSYVDPKVAGKLLSTF-NRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK HV H+LKK+ L R +AAV+ + + Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 262 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 120/212 (56%), Gaps = 8/212 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E IL+ DDHPMLR G+ ++ P VVGEA +GE+ + LA L PD++LLDL MPG Sbjct: 2 EGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+E L +LR ++VVF+ + E ++ AL+ GA G LLK ++ A+ Sbjct: 62 TGGVEVLRRLRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRTVH 120 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 AG V+ +T + +R LTPRE ++L+L+A+GL N+ +AR L I+E Sbjct: 121 AGGSVIPPEITARVLKEMRGES-------EPLTPRELEVLRLVARGLTNREVARALFISE 173 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV +L K++ ++R +A + + Sbjct: 174 RTVKFHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 262 bits (671), Expect = 6e-69, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DD P++R ++ L + DI VVGEASNGE+ ++ L P +IL+D+NMP M+ Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ L ++ ++++ +V N E VV A++ G Y+LKD PE L++ + A G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 127 EMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + ++ L +L R +++ LT RE+++L+LI GL NK IA +L+IT Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV +L K+ + R +AAV QE + Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLV 219 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 126/214 (58%), Gaps = 6/214 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD P++R G+ L+++ PD+ VVGEA +G + +A+ L PD+ LD+ MPG++ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 67 GLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ +L + ++V + + ++ V AL+ G G+LLKD EPE + A+ Q A Sbjct: 62 GIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRA----TTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AG + + LT + R+ +T R LT RE++IL L+AQG+ N IAR L Sbjct: 122 AGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 + STVK H+ ML K+ ++SR++A VW +Q R Sbjct: 182 VVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNR 215 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 262 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 119/211 (56%), Gaps = 2/211 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 ++++ +DH +LR G+K L+ P + V GEAS+G+ ++L + P+L+L+D++MP M+G Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ ++++ R++V +V E V AL GADGY+LKD ++ + A+ G+ Sbjct: 66 VQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGK 125 Query: 128 MVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + LS ++ + A + LTPRE++I +L+A+G N+ IA L ++ Sbjct: 126 IYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVK 185 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H ++++K+ + S E + I Sbjct: 186 TVEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 T+ L+DD ++R G + ++ DITV EA++G++ +E A + D+IL+D+ MP M+ Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE ++ + RI+V + + E VV A++ GA G+LLKD PEDL+ A+ Sbjct: 62 GLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 127 EMVLSEALTPVLAASLRANRATTE-----------RDVNQLTPRERDILKLIAQGLPNKM 175 V+S A T VL S+R + T+ ++ LTPRE++IL LIA G N Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+ TVK HV +L K + RV A ++ + Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 262 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 64/214 (29%), Positives = 119/214 (55%), Gaps = 2/214 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +LL++DH ++R G+K L++ D+ VVGE ++G +E AE L PD++++D+NMP Sbjct: 3 QTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMPK 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G+ ++REK + R+++ S+ + EE V A++ GA GYLLK DL+ A+ + A Sbjct: 63 LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREVA 122 Query: 125 AGEMVLSEALTPVLAASLRANRA--TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G S + +L R R+ + LT RER++L L+ +G + IA+ L + Sbjct: 123 GGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILGL 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T++ H ++ K+ + + + + Sbjct: 183 SVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLV 216 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 122/211 (57%), Gaps = 2/211 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +L+ DDH +LR G+ +L+S DI VVGEA +G++ +++ PD++L+D+ MP + Sbjct: 3 KTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPRL 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 G+E +++ + S I++ + + ++ L+ GA GYLLK + ++++ A+ A Sbjct: 63 TGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIKA 122 Query: 126 GEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE VL T L + + + ++ QL+PRE +IL+L ++GL N+ IA +L ++ Sbjct: 123 GESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTLS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK H+ ++ KM+ R EA V +E Sbjct: 183 MRTVKAHLSNIFNKMRCSCRTEAIVKGFREG 213 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 262 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 119/216 (55%), Gaps = 6/216 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DD + R+G+ ++ + VVG+A++G + + + + L PD++L+D+ MP ++ Sbjct: 34 IRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVRMPELD 93 Query: 67 GLETLDKL------REKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 G+E ++ ++ R++V + + ++ A++ GA G+LLKD P L A+ Sbjct: 94 GVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAMLRDAI 153 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AG VL+ L R + + LTP+ER++L +A GL N IARR Sbjct: 154 RTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAEIARRA 213 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ESTVK HV +L+K+ L+ RV+ V H+ + Sbjct: 214 FVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLV 249 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 79/210 (37%), Positives = 123/210 (58%), Gaps = 9/210 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDHP +R G+ LI P + VV EAS+GE+ IE+ + L PD++L+DL MPGM Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPGMG 79 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +R+K+ R++V S + +ED+ AL+ GA YLLKDM E++ + AG Sbjct: 80 GVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVYAG 139 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L ++ L + QLT RERD+L+ + +G NK IA L I+E T Sbjct: 140 DTSLPRSVAERLTERAQR---------EQLTERERDVLESLIKGRSNKEIASSLCISEDT 190 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+K + K++++ R AA+ + I Sbjct: 191 VKSHLKTLFAKLRVRDRTGAAIEAIRHGIV 220 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 117/224 (52%), Gaps = 8/224 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M ++ I+L DD P +R G++ ++ + D+ V+GEA GE+ +++ PD++L+D+ Sbjct: 1 MQTEKMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG G+ + E + ++V+ + + E+ V ++ GA GYLLKD E ++LL + Sbjct: 61 RMPGGTGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLR--------ANRATTERDVNQLTPRERDILKLIAQGLP 172 G + + + + ++ +R + LT RE ++L+L+A G Sbjct: 121 RAMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKR 180 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 N I+ L I+E T K H+ H+++K+ R +A V + ++ Sbjct: 181 NHEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLV 224 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 1/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E ++LIDDH + R G+K+L+ M PD ++ GEAS+G +G+ L + PD++LLD+ MP Sbjct: 2 EKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPN 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G+ + +LR + + V + N E + G G++LK +LL A+ A Sbjct: 62 LDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ + + +L + + + LT RE+++L +AQGL N I+ +++++E Sbjct: 122 RGQCYVDPKVAGLLLGAF-HKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSE 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK HV H+LKK+ L+ R +AA+ + I Sbjct: 181 KTVKNHVSHILKKLDLRDRTQAAILAWRVGI 211 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 5/218 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N +LL DDH ++R G++ L+S DI +VGEA G + +++A+ L PD+IL+D+ Sbjct: 28 MPN---IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDI 84 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP MNGLE K+ E + S +++V S ++ V + GA GYL+K DL+ A+ Sbjct: 85 AMPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVN--QLTPRERDILKLIAQGLPNKMIAR 178 + G S + L +RA A +LT RE + L I G PNK+IA Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + I+ TV+ H + ++ K+ + + + + Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMI 242 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 126/223 (56%), Gaps = 8/223 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ++P +LL++DH ++R G+K S+ D V+GEA NG+Q I+LA L P+++L+D+ Sbjct: 1 MS-EQPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDI 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P ++G+ K++ R++ S + VV L GADGY LK ++ + LL + Sbjct: 60 ELPILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQ-------LTPRERDILKLIAQGLPN 173 G L + LA+ L++ T ++ L+ RER++L+LI++G N Sbjct: 120 RLIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSN 179 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + IA +L ++ T+K +V+ +L K+ + RV+AA +E + Sbjct: 180 QEIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 129/219 (58%), Gaps = 7/219 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + ILL+DDH ++R G+K + + +VGEA+NG GIE + L PD++++D+ MP Sbjct: 2 KKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E D + +K ++++ S+ ++E ++ +++ GA GYLLKD++ ++ +KA+ Sbjct: 62 MSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTER-------DVNQLTPRERDILKLIAQGLPNKMIA 177 G+ + A++ VL + + T+ D +LT RE+ ILK+I G N+ IA Sbjct: 122 NGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ T++ H +++KK+K+K+ VE E+I Sbjct: 182 DGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 66/203 (32%), Positives = 116/203 (57%), Gaps = 4/203 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DDHP+ R GV +++ PD V+ EA +GE+ +++A +L PDL+L+D+ MP +N Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPDLN 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E K+ K I++ ++ + V +A++ GA GY+LKD E ED+L+A+ A G Sbjct: 64 GIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIAKG 123 Query: 127 EMVLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 E++ S + + T +LT RE ++L L+++G N +A L + Sbjct: 124 EVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETLGL 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVE 205 + TV +V ++L K+++ R E Sbjct: 184 SNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 125/213 (58%), Gaps = 4/213 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL +D ++R G+++++ A D+TV+ EA +G + + PD++++D+ MP ++ Sbjct: 2 TRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL ++ +I++ ++ + + +V +A++ GA G+LLKD PE+L+ A+ A G Sbjct: 62 GLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADG 121 Query: 127 EMVLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + +LS ++T L + + R +++LTPRER IL L+ GL N IA+ L Sbjct: 122 DAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGA 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TESTVK HV +L K+ ++RV+ A+ H I Sbjct: 182 TESTVKGHVSRLLMKLDCENRVQLALIAHNAGI 214 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DD M+R GV+ +++ P+I VV EA +G + I+L S PD++LLD+ MP M+ Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL + +LR + +V+ + ++ + AL GA G+LLK +P +LL +H A G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 127 EMVLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 LS + + L R T V LTPRERD+L L+ +GL N IARRL + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E TVK HV +L ++ ++RV+AA+ H+ + Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHEAGLL 215 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + IL+ DDH ++R G+ L++ PD+ VV EA++G Q +EL +PDL L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +G++ ++R + + +++ + + +ED+ AL+ GA GY+LK E L+ AL Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAG+ + + + LA QL+PRE +L +A+GL NK IA L Sbjct: 121 RAVAAGQRWIPKEVANRLA---------LRNSFEQLSPREVQVLSELARGLANKEIADVL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +ITE T K H+K +L K+++ R EA Q I Sbjct: 172 NITEHTTKDHLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 125/223 (56%), Gaps = 7/223 (3%) Query: 1 MSNQEPATI--LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M+ EP T+ L++DD P++R G+ ++ APDI VV +A +G Q + L + PD++L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+GL + LR + + ++V + + ++ V+ AL+ GA G+LLKD P++++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLR-----ANRATTERDVNQLTPRERDILKLIAQGLPN 173 A+ Q A G VLS +T L A + R + L RER++ + QG N Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I L ++ TVK HV +L K+ L +RV+ A+ VH + Sbjct: 181 AEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALLVHDAGLL 223 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 109/210 (51%), Positives = 148/210 (70%), Gaps = 2/210 (0%) Query: 5 EPA-TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 EP T+LLIDDH + R GV QLI M P VVGEAS+G G++LA L PD++L+DLNMP Sbjct: 2 EPVNTVLLIDDHALFRKGVAQLIQMNPAFRVVGEASSGRVGVDLAVRLKPDVVLIDLNMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 MNG+ETL+ +R+ + R ++ +VS++E DVV AL+ GA GYLLKDMEPE+L L +A Sbjct: 62 DMNGIETLEMMRQHGVDARFLMLTVSDNERDVVAALRAGASGYLLKDMEPEELCLNLQKA 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G VLSEA+T L +L A + + + L+ RE+++L + +G+ NK IAR+LDI+ Sbjct: 122 LQGTAVLSEAVTGKLFHALSAGQ-PLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDIS 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVKVHVKH+L K+ L SRVEA VW H++ Sbjct: 181 VGTVKVHVKHLLHKLDLHSRVEAVVWHHEQ 210 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P ++++DDHP++R GV+QL+ + P VV EA +G I+LA LD D+ILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NM GM+GL+TL+ LR ++ +I++ +VS+ DV + GADGYLLKD +PE LL+A+ Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G V SE + L R E + LT RE D+L +AQGL NK IA L Sbjct: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +I+E TVKVH++++L+K+ ++SRV A + Q+R Sbjct: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 121/210 (57%), Gaps = 2/210 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L+ DDH + R ++ L+ + VVGEA G++ +ELA L PD++L+DL MPGM+G Sbjct: 2 RVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDG 60 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L + + ++VV + S +ED+ A+K GA GY+ KD+ + + L A+ GE Sbjct: 61 LAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGE 120 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGL-PNKMIARRLDITEST 186 + L L + ER+ LT RE++IL+L+ QG+ NK +A RL ++E+T Sbjct: 121 PAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H++++L K+ L++R + + Q + Sbjct: 181 VKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDHPM+ G++ ++ DI VVG S+G + I AE+L PD+IL+DLNMP + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GL + ++E+ R+++ S+ + E + TAL GA GY+LKD++PE++ A+ Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE L L+ + +R LT RE+ IL +AQG NK +A+ LDI+ Sbjct: 143 GEQYLCTGAAGSLSPQSQTSR-------EALTGREQTILLELAQGKSNKEVAQALDISVR 195 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H K++ +K+ + S + + + Sbjct: 196 TVETHRKNIKRKLGISSTAGLTRYALEHGVL 226 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 125/212 (58%), Gaps = 3/212 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + A +++ DDH ++R G+++L+ + +I V+ E +G+ I +A PD+I++D+NMPG Sbjct: 2 DKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ ++ + S RI+ +V EE VV +K GA Y+LKD+ +L+ +H+ Sbjct: 62 TDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVM 120 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE+V+ + L LR ++ + +LT RE+D+L L+ +G NK +A + I+E Sbjct: 121 NGEVVIYPRVANRLVRELR--QSENRKSEIRLTKREKDVLTLLVKGNTNKEMAEVMFISE 178 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+ + +K+ +K R AA++ + RI Sbjct: 179 KTVKNHLTSIFRKLGVKDRTHAAIYALKNRIV 210 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 74/226 (32%), Positives = 130/226 (57%), Gaps = 12/226 (5%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S++ I++ DDHP+ R G+ +L+++ D VV +A +G Q +++ + +PD++LLDL Sbjct: 18 SSKPKIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLK 77 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG++GL TL +L+ R++V + S+ + + V A+K G G +LK E L+K++ Sbjct: 78 MPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIR 137 Query: 122 QAAAGEMVLSEALTPVLAASLRAN------------RATTERDVNQLTPRERDILKLIAQ 169 + AGE+ L T + AN T ER+ + L+ RER+I+ L+AQ Sbjct: 138 KVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQ 197 Query: 170 GLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 G NK +A ++ I+E TVK H+ ++ K+ + R+E A++ + Sbjct: 198 GFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 7/213 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P + L+DDH ++R G+ ++ PDI VVGEA+NGE +++A + D+I++D+ MPG Sbjct: 2 SPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPG 61 Query: 65 -MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 ++G+ET +L+ I++ S + V+ AL+ GA Y+ K+ +PE LL+A+ A Sbjct: 62 GIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGA 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG+ VL+ AL + A T + + LT RER++LKL+A+GL N IA RL ++ Sbjct: 122 MAGKAVLAPALMQRILE------AQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVS 175 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E TVK HV +L+K+ L R +AA++ + + Sbjct: 176 EETVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 120/221 (54%), Gaps = 16/221 (7%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I L+DD ++R G + ++ PD++VVGEA +G+ ++ +++ D++L+D+ MP ++G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 LETLDKL--REKSL---SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 +E L R+K ++VV + + +E AL+ GA G+LLKD PE+LL A+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQ-----------LTPRERDILKLIAQGL 171 A+G+ V++ + T L DV LT RE ++ + +A GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 N IA+ L + E+T+K H+ +L K+ + RV+ + ++ Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +LL DDHP++R G+ ++ I +VGEA +G++ + L P+++L+DL+MP Sbjct: 16 KKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+GLE +R + ++++ S+ +++ V+ +K GA GY+LKD +L++A+ Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQ--LTPRERDILKLIAQGLPNKMIARRLD 181 G S ++ ++ A E N LT RE ++L +IA+G NK +A R+ Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H + ++ K+ + + + I Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGII 230 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 123/210 (58%), Gaps = 2/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL DDH +LR GVK L++ D+ VV EA NGE+ + +A + PD+ ++D+ MP M+ Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ E S R+V S+ V LK GA G+LLKD +L++A+ + G Sbjct: 63 GIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMDG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E+ L +++ ++A L + D+ LTPRE++IL L+A+G N+ +A RL ++ T Sbjct: 122 EIYLGPSISHIVAK-LYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V H +H++ K+KLK+ + + + + Sbjct: 181 VGTHRQHIMNKLKLKNLADLVKYAIRNGMI 210 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 121/205 (59%), Gaps = 1/205 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DD ++R +K LI + D TVVG ASNG++ E + PDLIL+D+ MP M+G Sbjct: 2 KVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMDG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + ++E S RI++ + ++ + ALK GA GY+LK + ++++L + G Sbjct: 62 VLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKGN 121 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +V + VL + L+ + D+ QLT RE +I+K + +GL N+ I+ L ++E TV Sbjct: 122 VVFETEIASVLTSMLKEEKEKHHLDL-QLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 + +V +L+K+ ++ R + A++ + Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLK 205 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +LL+DDH ++R G++ + + I VVGEA+NGE+ ++ AE L P+++++DL M Sbjct: 10 TTPTVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMM 69 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M+G+ +LR + ++ + + E V A++ GA Y+LKD + L A+H Sbjct: 70 PVMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AA GE+ L L R+ LTP+E +L+L+A+G NK IA + Sbjct: 130 AARGEVRLHPEAARRLVRDFRSPEMR-----ESLTPKETAVLQLLARGQSNKDIAAEQGV 184 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E+TVK HV +L K+ L SR +AA++ + I Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALKYGI 217 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 4/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL+++DH ++R G++Q++S P+ V GEA++GEQ + LA SL PDL+L+DL +P M+ Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDME--PEDLLKALHQAA 124 G E L+ + + R++ + + +E V AL GADGY LK LL A+ Sbjct: 62 GTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G L + + L R N L+ RE ++LKLIA GL N I RRL I Sbjct: 122 DGAAWLDPDIADRVLRDL--GRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLYIAS 179 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VHV +++ K+ + RV+AAV +E Sbjct: 180 GTVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 258 bits (661), Expect = 8e-68, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL+DD ++R G+ L+ + D+ V G A+NG++ I+ A L P++IL+D+ MP +N Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E K+++ +I++ + + EE +V +L GA GYL+KD+ P+DL +A+ A AG Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKMIARRLDIT 183 L+ + L SL+ RA + LT RE ++LKL+A+G NK IA+ +++ Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV ++L ++ L+ R +AAV+ + + Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVEHGL 214 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL +D M+R G+K +I DI V GEA +G + + L E+ D+ +LD+ MP M+ Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +R + +I++ + + + VV +LK G +GY+LK+ + E L++++ G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L + + + +L N+ D LTPRER IL I +GL NK IA RL ++ T Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSID-PSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ K+ L+ R + A++ + R+ Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 123/209 (58%), Gaps = 1/209 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E + ++DDH ++R G++Q ++ DI VVGEA + + +L P + +LD +P Sbjct: 34 EKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPD 93 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G++ ++R ++ + + +E + +A+ GA GY+LK++ DL+ A+ A Sbjct: 94 GSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVA 153 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +G+ +L+ ++T + LR + + + L RER+IL+LIA GL N+ I RL ++E Sbjct: 154 SGQSLLAPSVTRRVLERLRDG-PSEDPAMATLNQREREILQLIADGLTNRQIGTRLGLSE 212 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVK +V +L+K+ L SR +AAV++ ++ Sbjct: 213 KTVKNYVSSILEKLGLASRTQAAVYLMKQ 241 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 66/216 (30%), Positives = 118/216 (54%), Gaps = 7/216 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I++ DD ++R G+ L+ + ++ V+ A NG++ E A+ L+PD++L+D+ MP N Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + S ++++ + + AL+ GA GYLLKDM + ++KA+ +G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 127 EMVLSEALTPVLAASLRANRA-------TTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 MVL LT + + + ++ LT RE ++L + GL NK IA + Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L ITE TVK HV +++ K+ ++ R +AA++ + + Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYGV 217 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 66/214 (30%), Positives = 116/214 (54%), Gaps = 3/214 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 I+L+DDHP+ R+G+K ++ D V+ EA +GE IE+A +PD+I++D++MPG+ Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +++ K RI++ ++ E + +L GA GY+LK +L+ A+ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNKMIARRLDI 182 GE + L P L + + + D NQ L+ RE+++LK IA G K I+ L I Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV + K +++K+ K + + + I Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 113/210 (53%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+L+DDH + R+G++ L+ I VVGEAS GE+ + + + + D++ +D MPGMN Sbjct: 4 CRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMN 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G ET +K +++ S+ E ++ GA G+L+KD +++L+A+ AAG Sbjct: 64 GAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAG 123 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E + LA+ ++ + E +L+ RE +IL + +GL N+ IA L I++ T Sbjct: 124 GTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V H ++L+K K+ V+ + + Sbjct: 184 VDKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 77/221 (34%), Positives = 128/221 (57%), Gaps = 10/221 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD------PDL 55 + E ++++DDH ++R G++ + PD+ +V EA++G++ ++L P + Sbjct: 6 TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65 Query: 56 ILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPED 115 +L+DL MP ++G+E + ++VV + + E V AL GA GY+LKD EPE+ Sbjct: 66 VLMDLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 + A+ A GE+ L A+ +LA + A+ + V LT RERDIL L+ QGL N+ Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARRM----ASPQVGVTSLTARERDILVLVGQGLSNRE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA RL I+E T + HV ++L K++L SR +AA+ +E + Sbjct: 182 IADRLVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 257 bits (659), Expect = 1e-67, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 122/211 (57%), Gaps = 7/211 (3%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 EP +L+ DDHP++R G+K + + PD++VV EA +G++ + L + +PD++LLDLNMP Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G +G + L +L +++V + V A+ GA G+L KD++P+ L +A+ Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A G+++ + ++ A A V LT RER++L L+A G N+ IA++L + Sbjct: 122 ADGQVIFAR-------EAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVA 174 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 E TVK H+ + +K+ + R +AA++ Sbjct: 175 EKTVKTHLSSLFRKLGVADRTQAALYAVTHG 205 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 1/212 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +L++DDH ++R+G++ ++S DI VVGEA++G GI +A+ + PD++LLD++MP Sbjct: 2 KKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+GLE L L R+++ ++ V GA GY+LK + L +A+ Sbjct: 62 MSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +GEM + ++T + A L R + L+ +E+ +L LIA G N+ IA +L I+ Sbjct: 122 SGEMYIQPSITKAVVAEL-TERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ + +++K+ K R + + + Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 I+++DD ++R G+K ++S DI VVG A +G + + L + D ++L+D+ MP Sbjct: 2 NKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPN 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ ++E+ +I++ + N +E + ALK GA GYLLKD E + + + Sbjct: 62 CDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACV 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKMIARRLD 181 G +V+ + + + + + D+N LT RE +I++ IA GL NK IA ++ Sbjct: 122 KGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++E T+K ++ +L K+ L+ R + A++ + I Sbjct: 182 LSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIV 216 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + I+L DDH +LR G+K L++ PD+ V+GEAS+GE+ I+ + L PDL+LLDL MP Sbjct: 2 NKKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +NG++ +++L +K +I+V ++ + EE + L+ GA GY+LK +LL A+ Sbjct: 62 KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIARRL 180 A GEM + + + E++ + QL+ RE ++L+ +A G N+ IA L Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ + +++K+++ R E + + I Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P I+L DDH ++R G++ L+ P +T+VGEA +G + + L + PD+ ++D+ MPG+ Sbjct: 4 PLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMPGL 63 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG + ++ + ++++ S+ E+ V+ AL+ GA GYLLKD +L AL+ Sbjct: 64 NGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVRK 123 Query: 126 GEMVLSEALTPVLAASLRANRATTE-RDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE LS +++ + A R LTPR R+I++LIA+G K IA L+++ Sbjct: 124 GETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLSV 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T++ H H++ ++ L + + + Sbjct: 184 KTIETHRMHLMARLGLHDVAGVVRYALRTGLI 215 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++R G++ LI D+ VVGEAS+G + + LA PD++L+DL MP M Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 67 GLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ET +R L +VV + +H+ DVV A++ GA GYLLKD+ ++L A+ A Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 125 AGEMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G ++ + ++ + +R E + LT RE DIL + +GL N+ I + L + Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T + +V +L K+ ++ R + V H+ + Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLV 215 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 257 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 6/214 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N I+L+DDH ++R G++ L++ + +VGEA NG IELA + P +IL+DL Sbjct: 1 MTN--IIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G++ L+ S RI+V + + ++ V A++ GA GYLLK++ +L A+ Sbjct: 59 VMPNVDGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G+ L L + LT RER +L I GL NK IAR L Sbjct: 119 RTVANGQPFLHAEAQRTLMR----QSTAPPSLLPSLTERERSVLDGIVGGLSNKEIARSL 174 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +TE TVK +V +L K+ + R +AA++ + Sbjct: 175 HLTEGTVKGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 6/220 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + EP ++L DD ++R G++ +I AP + VVGEA+ G + +A D++L+D+ Sbjct: 9 AATEPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIR 68 Query: 62 MPGMNGLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MPG++GL ++ R+++ + ++ V AL+ GA G+L K P+ L+ A Sbjct: 69 MPGLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDA 128 Query: 120 LHQAAAGEMVLSEALTPVLAASLRA----NRATTERDVNQLTPRERDILKLIAQGLPNKM 175 + A G+ +LS + T L A + + LT RER++ L+A G+ N Sbjct: 129 IRTVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTD 188 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 IAR+L ++ TVK HV H + K+ + R + V +Q + Sbjct: 189 IARQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGL 228 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDH +LR G+K L+S D+ VVGEA+ G + + L SL PD+++LD +P + Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +L+E+ +++ + + + V+ A++ GA GY++KD+ DL +++ A Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+ + + L +R+ A E + L ++ I++L+AQG N+ IA R+ ++E Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERIP-LNRQQLAIIRLVAQGYTNREIAERMFLSEK 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK ++ +++M +K+RVEAA+ + Sbjct: 181 TVKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 257 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 72/234 (30%), Positives = 128/234 (54%), Gaps = 18/234 (7%) Query: 1 MSNQ---EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 M NQ E ++L+DD M+R G+ +I M D+ V GEASNGE+ +++ + PD++L Sbjct: 1 MENQNKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVL 60 Query: 58 LDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLL 117 +D+ MP M+G++ ++ S ++++ + + + +V ++ GA GY+LKD + +D+L Sbjct: 61 MDVQMPNMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDML 120 Query: 118 KALHQAAAGEMVL-SEALTPVLAASLRANRATTERD--------------VNQLTPRERD 162 + +A GE + + LA L+ + E D +QLT RERD Sbjct: 121 DLIRRAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERD 180 Query: 163 ILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +L+ ++ G N IA+ L I+ TVK H+ +L+KM ++ R +A + +I Sbjct: 181 VLEQLSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIV 234 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 79/216 (36%), Positives = 129/216 (59%), Gaps = 5/216 (2%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ILL+DDH ++R G+K L ++ PD V+GEA++G Q IEL E L PD+IL+D+++P + Sbjct: 9 PIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDLPLL 68 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ +++ + +I+ S +H+ V+ L GADGY LK++E E+LL + + Sbjct: 69 DGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRLISH 128 Query: 126 GEMVLSEALTPVL-----AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G + L + + + S TT + V L+ RER ILKLIA+G NK IA +L Sbjct: 129 GGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIAEQL 188 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ T+K +V+ +L K+ + RV+AA +E + Sbjct: 189 FLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH M G+++L+ A I + G A +G + + AE L PD+ L+D+ MP +N Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ K+ S +++V S+ + +V +LK GA GY+LK+ ++L A+ A G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 127 EMVLSEALTPVLA-ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + L+ A+ L LR + L+ RE D+LKL+ +G K IA +L I+++ Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TV H +H+L K+ S E + +E Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 9/210 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DDHP++ G+ +I+ PD+TVVG+A G + + LA PD+IL+DL MPGM+ Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +R + ++V + +ED+ AL GA YLLK M LL+A+ G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 A+ + L + L+PRE DIL+LI +GL N+ IA L+IT T Sbjct: 143 HTYFPRAIRNSVPGKL---------NRAALSPREMDILRLIVRGLSNQEIADALNITRGT 193 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV +L+++ + R +A V Q I Sbjct: 194 VKWHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 256 bits (656), Expect = 4e-67, Method: Composition-based stats. Identities = 69/225 (30%), Positives = 123/225 (54%), Gaps = 20/225 (8%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +++ DD +L +K +I + D+ VV +SNGE+ +E++E L PD+IL+D+ MP Sbjct: 2 SKIKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPK 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E KL+EK +I++ + +H+E +V AL GA GYLLKD++ + L+ ++ A Sbjct: 62 MDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERD--------------------VNQLTPRERDIL 164 ++++ ++ L + + D +LT RE +I Sbjct: 122 NDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIA 181 Query: 165 KLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 +L+ GL NK IA +L IT+ TVK ++ ++ K+ +K R A ++ Sbjct: 182 QLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLY 226 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 119/216 (55%), Gaps = 10/216 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S E ++++DDH +R ++ ++ D+ VVG A +G Q +EL E L+PDL+L+DL Sbjct: 378 SADEIIRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLE 437 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M+G+ +++EK RI+V S E ++ GADGYLLK +E +L + + Sbjct: 438 MPNMDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIR 497 Query: 122 QAAAGEMVLSEALTPVLAAS----------LRANRATTERDVNQLTPRERDILKLIAQGL 171 G ++++ L + + ++ + + LT RE++IL+++AQG+ Sbjct: 498 LVHRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGM 557 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAA 207 K IA +L +++ TV+ + + K+ +++R +A Sbjct: 558 RYKTIASKLYLSDGTVRNYASALYDKLGVRNRDDAV 593 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 71/215 (33%), Positives = 134/215 (62%), Gaps = 9/215 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+DD ++R G+K ++S+ +I+++ EA NG+Q +++ + + PD+IL+D+ MP MN Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++EK + ++++ + N +E V+ ++ GADGY+LKD D++K++ A G Sbjct: 62 GVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNG 121 Query: 127 EMVLSEALTPVLAASLRANR---------ATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 +++L A+T L + + ++ + LT RE D+ KL+AQG NK I Sbjct: 122 DILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDIC 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 L +TE TVK ++ ++ +K++L SR E A++++Q Sbjct: 182 HTLFLTEGTVKNYLTNIFEKLELSSRTELALFINQ 216 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 E +L++DDHP++R ++ L+ D VVG A +GEQ IEL L P L+L+D++M Sbjct: 354 KDEVIRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDM 413 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ ++E RI++ + + + AL+ G DGYLLK M+P +L + + Sbjct: 414 PIVDGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRT 473 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTER------DVNQLTPRERDILKLIAQGLPNKMI 176 G ++ + ++ L A L A+ + + LTPRE +IL+ +++GL K I Sbjct: 474 VHRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSI 533 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEA 206 A +++ TV+ + K+ +++R EA Sbjct: 534 ASNFYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 92/211 (43%), Positives = 136/211 (64%), Gaps = 5/211 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S P ++++DDHP++R GV+QL+ + +VV EASNG + I LA PDLILLDLN Sbjct: 6 STTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLN 65 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 M G++GL+TL LR + + RI++ +VS+ DV + GAD YLLKD EPE LL + Sbjct: 66 MKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 QAA G V SE+++ L + R+ + LT RE D+L+ + +G+ NK IA +L Sbjct: 126 QAAEGRSVFSESVSAYL-----STRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLH 180 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 I+E TVKVH++++L+K+ ++SRV A V + Sbjct: 181 ISEETVKVHIRNLLRKLNVRSRVAATVLYLE 211 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 128/223 (57%), Gaps = 8/223 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P + L DDHP+LRTG++ +S DI +GEAS+G + +E + PD+ L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG++G+ + LR++ +++ S + + + A++ GADGY+LK ++ +L + Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQ-------LTPRERDILKLIAQGLPN 173 + GE +S L LA A+ E ++ LT RE+ IL +AQG N Sbjct: 121 RAFSCGEHPMSPYLMD-LAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGN 179 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K I+ L I+ TVK H+K++ KK+++KSR+EA + ++++ Sbjct: 180 KEISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 125/209 (59%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L+ DDHPM R ++ L+ P V+GEA NGE+ L + PDL+L+D+NMP +G Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE ++++ ++V+ SVS+ D++TA++ GA GYLLK++EP+D + LH + Sbjct: 65 LEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGED 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L+ + L R AT E LTPRER+I+ + G N+ I+ L I E+TV Sbjct: 125 SELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K H+K++L+K++L +RV+ A + + + Sbjct: 185 KNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 255 bits (654), Expect = 5e-67, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +LL DDH ++R G++ ++ P+I VVGEA+NG + ++LA L PD++L+D++MP Sbjct: 3 KPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMPV 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNGLE ++R+ +++ S+ ++ E V ++ GA GY+LKD+ +++ A+ A Sbjct: 63 MNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSVA 122 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +G S A+ P L + + D LT RER +L IA+GLPNK +A+ L I+ Sbjct: 123 SGGYYFSSAVGPTLVGTAT---SAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGISV 179 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H ++ +K+ K+ + + Sbjct: 180 RTVESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 73/201 (36%), Positives = 114/201 (56%), Gaps = 8/201 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM-PGM 65 +LL DDH ++R G++ L+ DI VVGEA+ + + L + DL+L+DL PG Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G++ LR ++V + + + D++ A+ GA GYLLKD P +LL A+ A+A Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G+ VLS A+ L +R R L+PRE +L L+A G N+ I + L ++E+ Sbjct: 122 GDSVLSPAVASKLMTRVR-------RPATSLSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 186 TVKVHVKHMLKKMKLKSRVEA 206 TVK H+ H+ K+ +KSR A Sbjct: 175 TVKSHLVHIFGKLGVKSRTSA 195 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q P ++L DDH M+R G+ + + PD +V EA G++ I + PD+ LLD +P Sbjct: 3 QRPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M G+E LR + RI++ S N EEDV A++ GA+ YLLK+ +++ A+ Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG ++ +LAA +R +LTPRE+ +L I +G NK I L+IT Sbjct: 123 HAGSPYFPPEISAILAARMRR---------EELTPREKSVLFEIVKGSSNKEIGCCLEIT 173 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ES VK+HV H+L+K+ K R AA Q I Sbjct: 174 ESAVKIHVTHLLQKLNAKDRTHAATIAIQRGIV 206 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+DDH ++R G++ L+ + + V GEA + + + PD+ILLD +P + Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ L+ + +I++ + + V +K GADGYLLK++E E+L+ + G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + VL ++T +L ++++ + E + LTP+E IL +I+ G NK IA + I++ T Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHN---LTPKEVQILDMISVGKANKEIAEIMKISDKT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 V+ +V ++L+K+ + +R EAA + + Sbjct: 182 VRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 255 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 131/216 (60%), Gaps = 2/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILL 58 M ++E +++ DDH M+ G++ LI + DI V+G A NG +L E LD D+ +L Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D++MP +GLET K+R + + ++++ ++ N+E + + GA GY+LK+ +L+ Sbjct: 61 DVDMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVN 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ AGE S+A+T L S++ ++ +LT RE+++L LI +G+ K I++ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +L I ++TV+ H ++++ K+++K+ E ++V + + Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 255 bits (654), Expect = 7e-67, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 116/216 (53%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +L+ DD ++R+ + +I + PD+ +VG +GE + A ++ D+ LLD+ Sbjct: 1 MAADDVIRVLVADDQELMRSALGTVIDVQPDMRLVGSVPSGEDAVREALAVSVDVALLDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 M M+G+E ++R R+++ + + +E + ++ GA G+L KD D+ A+ Sbjct: 61 RMARMDGIEACAEIRRHRPDTRVLMLTTFDLDEYLFRSVAAGASGFLTKDTPGADVAGAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + +G V+S T L + L+PRERD+L L+A+G N IAR L Sbjct: 121 REVHSGRSVVSPRATRALIDRIARAAPDAAAVAADLSPRERDVLALLARGFSNAEIAREL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + ESTVK HV + +K+ ++ R+ VW ++ IF Sbjct: 181 FVAESTVKTHVSSLTRKVGVRDRLHVVVWAYRNGIF 216 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 9/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + +L++DDH M+R G+ + I+ D+T+VGEA+NG Q +E PD++ +D +P Sbjct: 2 KRKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G +G E+ LR + R+VV SV EED+ A++ GA GY+ K E E++L+A+ Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE + LA+ R + LTPRE +L I GL NK IA L ++ Sbjct: 122 VGGETYFPAPIASKLASR---------RTRDALTPREHQVLHHIVAGLSNKEIAAALHMS 172 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E+TVK+H+ + L K+ + R +AA+ Q I Sbjct: 173 EATVKLHISNTLAKLHVADRTQAAIVAVQRGII 205 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 255 bits (653), Expect = 7e-67, Method: Composition-based stats. Identities = 71/208 (34%), Positives = 112/208 (53%), Gaps = 1/208 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DDH +LR G++ L+ PD+ VVGEA + I A +L PDLILLDL++ +GL Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + LR + RI+V ++ + E V AL GA GY+LK +L+ A+ GE+ Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + ALT L + T L+ RER++L L+A+G IA +L+++ TV+ Sbjct: 124 YIHPALTRRLLEDILPQPQPT-NPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVE 182 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + ++K+ L+SR + + Sbjct: 183 TYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ +LL DDHP++R G++ L+ PDI VVGEA ++ +ELA +L PD+ +LD+ Sbjct: 1 MTTN-KIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDI 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG NGLE L ++ L R ++ +V E ++ L+ G GY+ K DL++A+ Sbjct: 60 SMPG-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIAR 178 A GE+ + +A L + T E L+ RER++L+L A G + IA Sbjct: 119 RLVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIAD 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +L ++ TV+ + +++K+ R E + + + Sbjct: 179 QLFLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 126/231 (54%), Gaps = 21/231 (9%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++RTG+ ++ PD+T V +A +GE+ + L + DPD++L+D+ MP M+ Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 67 GLETLDKLREKS-----LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 GL +++ + ++V + + E V++A++ GA G+LLKD +P+ L+ A+ Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERD----------------VNQLTPRERDILK 165 G+ ++ A T VL D + QL+ RERD+L Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 166 LIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +A+GL N+ +A +L ++E+TVK HV +L K+ L SRV+A V ++ + Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEAGVV 241 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 117/212 (55%), Gaps = 1/212 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M++ +P + L+DDH ++R GV L+ D+ VVGEA + + +L PD+++LD+ Sbjct: 1 MADMDPVRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P +G+ +LR + ++ + + +E + A+ GA GY+LK + DL+ A+ Sbjct: 61 RLPDGDGVAVCRELRATT-DVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAG +L + A +RA + + LTP+E+ IL LI QG+ N+ I L Sbjct: 120 RTVAAGGSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAEL 179 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 + E TVK +V ++L K+ ++ RV+ AV + Sbjct: 180 FLAEKTVKNYVSNLLAKLGMERRVQVAVLATK 211 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 12/220 (5%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R+G++ L+ A DI ++ EA+NG + IELA L PDLIL+D+ MP M+ Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L ++L +++ + +E V+ AL+ GA GY+LKD PEDL+ A+ AA G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 127 EMVLSEALTPVLAASLRANRAT------------TERDVNQLTPRERDILKLIAQGLPNK 174 LS + L + + LT RER+I + +AQG+ N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +AR L ++ +TVK H+ + K+ + +RV+ A+ V++ R Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +LL+DDH ++R+G+ L++ D VV EA + EQ + PD+ L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG +G+E L ++R + R+++ + + +EDV AL+ GA GYLLK + +L A+ Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + AGE + ++L R ++L+PRE + L L+A+G N+ I L Sbjct: 121 RKVHAGERCVPQSL---------ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +TE T K HV+ +L K++ R EA ++ + Sbjct: 172 GVTERTAKAHVQAILVKLEAADRAEAVDAAYKRGLL 207 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 7/210 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDH + R G ++++ D+ VVG+A++GE + + L P ++L+D+ +PGMN Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRLPGMN 65 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++RE+ R+++ + + EE V A GA GYL K +L++A+ A G Sbjct: 66 GIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRAVAGG 125 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 VL L L A N LT RER +L+L+A+G+ NK IA RL I+ T Sbjct: 126 NSVLQPTLMAALL-------AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISART 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H + K+ + SR EA V + Sbjct: 179 VERHCDRIYGKLGVTSRTEAVVRAISANLL 208 >UniRef50_B2JVP2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JVP2_BURP8 Length = 215 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 104/209 (49%), Positives = 142/209 (67%), Gaps = 1/209 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P T+LLIDDH + R GV QLI M P V GEA++G+ GIE+A L PD++L+DLNMP M Sbjct: 3 PHTVLLIDDHALFRKGVAQLIQMNPSFEVTGEATSGQDGIEMAVRLKPDVVLIDLNMPRM 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+ETL+ +R+ + R ++ +VS++E DVV AL+ GA GYLLKDM+PEDL +L +A Sbjct: 63 NGIETLEGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G VLSE++T L +L + N LT RE ++ + GL NK IAR+LDI+ Sbjct: 123 GTAVLSESVTGSLVHALSGGQRIPAAQ-NDLTARELEVFDYLVAGLCNKAIARKLDISVG 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVKVHVKH+L+K+ L SR+EA +W + Sbjct: 182 TVKVHVKHVLRKLDLHSRLEAVLWQQEHG 210 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 132/213 (61%), Gaps = 4/213 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + ILL+DDHP+ R G+ L++ +V EA++G +G++LA PDL+LLD+ M Sbjct: 2 TESNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNG E L ++ + +++ ++S +++ L+ GA GY+LK+ + + L++A+ Q Sbjct: 62 PVMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQ 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 A AG+ +S + + ++ ++ LT RERD+L+ +A G+ NKMIARR+ + Sbjct: 122 AVAGQQTVSPEMNN----AGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFL 177 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E+TVK H++++ +K+ + +RV AAV+ + + Sbjct: 178 SENTVKAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 122/211 (57%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++++DDH ++R G++ L+ PD++VV EA NG + ELA L P ++L+D+ MPG+N Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ +L R+++ S+ + V A + GA GYLLKD +L++A+ Q A G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 127 EMVLSEALTPVLA-ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 EM + + V+ + + + LTPRER++L+LIA+G K A +L+I Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV H + ++KK+K++S E + +E + Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E I ++DDH ++R G++ L + ++ +VGEA++GE+ +++ + PD++LLD+ + G Sbjct: 2 EKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G +T + ++V+ S E+V A GA Y+LK++ +++KA+ Sbjct: 62 IHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVM 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE + +T + + +R +A ++ ++ L+ RE +IL L+ +G NK I R L ++E Sbjct: 122 QGESFIDPEITEQVMSLIRGEKAASQ--ISGLSKREEEILHLVGEGKTNKEIGRELFLSE 179 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ HV +L K+ + +R +AA ++ + + Sbjct: 180 KTVRNHVSRILDKLGVSNRSQAAAFMARRSVI 211 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 7/223 (3%) Query: 1 MSNQEP-------ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP 53 M+ P +LL+DD ++RTG+++++ + +VGE ++G + P Sbjct: 1 MTTTRPDETAAPAIRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSP 60 Query: 54 DLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEP 113 D++++DL M ++G+ L + ++V + + ++ + AL+ GA G++LKD Sbjct: 61 DVVVMDLRMRNVDGITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPA 120 Query: 114 EDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPN 173 E L+ A+ L A+T + R + ++LT RE D+L+L+A+G N Sbjct: 121 ESLIWAVRAVVRDGAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+E TVK H+ H+ K+ L+ R A V+ + Sbjct: 181 AEIAAGLGISEVTVKSHINHIFTKLDLRDRAAAIVYAFDHSLV 223 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 114/211 (54%), Gaps = 2/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L++DDH +L G+ L++ D+ V G+ ++ ++ + PD++LLDL++P Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDKQ 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G E + +L+E S R++ ++ E ++ G DGY+LK ++L+ A+ G Sbjct: 63 GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN-QLTPRERDILKLIAQGLPNKMIARRLDITES 185 E+++ + T +L R + + N L+ RE+++L+LIA G NK IA +L I+ Sbjct: 122 EVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISIK 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H+ + +K+ L R E + + I Sbjct: 182 TVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 127/219 (57%), Gaps = 9/219 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 L++DD ++R G++ L+ APDI VVGEA++G + L E L PD++L+D+ MP ++ Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L + +++ + ++ V AL GA GYL+KD EP D+L A+ +AA G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNKMIA 177 E +L+ ++ + R + A + LT RERD+L L+ GL N IA Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R L++ +TVK H+ +L+K+ +++RV+A + H+ + Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHRLGLV 220 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 7/215 (3%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + +++ DDHP++R G+ ++ + DI VVGEA +G Q ++LA +L PD+++ DL Sbjct: 24 PERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLR 83 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP ++G+ ++ + R+VV + + +++ A++ GA GYLLKD +L+ + Sbjct: 84 MPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIR 143 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 +AA G+ VL+ ++ L + + + ++LTPRE ++L+ +A+GL N + L Sbjct: 144 EAARGQTVLTPSVATRLVSQVGSR-------ADRLTPREVEVLRAVARGLSNAAVGHELF 196 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK H+ K+ + R A + Sbjct: 197 ISETTVKTHLIRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 4/218 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++P +L+ DD P++ T + ++ +I VV ASNG++ IE A+ D+ +LD+ M Sbjct: 6 NEQPIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG++ +++ S +I++ + + E+ V AL+ G G+LLKD PE L+ A+++ Sbjct: 66 PYVNGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINR 125 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPNKMIAR 178 G VLS +T + R + LTPRE ++LK +AQ N IA Sbjct: 126 IYHGASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIAN 185 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I TVK +V ++ K+ ++ RV AVW H I Sbjct: 186 YLHIGSETVKTYVSRLISKIGVRDRVGLAVWAHTSGIV 223 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH ++ G+ LI +TVVGEA++GEQ ++LA + PD++L+D+ MPG+ Sbjct: 8 IRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMDIEMPGIG 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ + +V+ ++ +E V AL+ GA GYLLK + +D+++ + A G Sbjct: 68 GVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRTIGAVARG 127 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + V + + + + A +LT RER++L L+A G PN IAR L +T T Sbjct: 128 DAVFGPDVAHRVLRTFTSPPAENA-PFPELTEREREVLSLLANGWPNSRIARHLQLTPKT 186 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 V +V ++L K+ R A + + + Sbjct: 187 VANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 253 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 38/248 (15%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++R G+ ++ AP VVGEA +G + + +A +PD++L+D+ MP M+ Sbjct: 2 VKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDMD 61 Query: 67 GLETLDKLREKSLS--GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ + RI++ + + ++ V AL+ GADG++LKD PE LL AL A Sbjct: 62 GIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAVA 121 Query: 125 AGEMVLSEALTPVLAASLR------------------------------------ANRAT 148 G+ + S +T L + + Sbjct: 122 DGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSSA 181 Query: 149 TERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 + LT RE D+L+L+A GL N IA RL ++E TVK H+ + K+ L SR +A V Sbjct: 182 ERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAVV 241 Query: 209 WVHQERIF 216 ++ + Sbjct: 242 LAYESGLV 249 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD P +R ++ L+ D+ VVG A +G Q I+L L P +IL+DL+M M+ Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E K++++ R+++F+ E + +L+ GADG+LLK +E +L + G Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN--QLTPRERDILKLIAQGLPNKMIARRLDITE 184 ++ + ++ + T + +LT RE +IL+L+A+GL IA RL ++ Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ + K+ ++++ EA + I Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKALEIGII 594 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 4/215 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + +EP ILL DDH +LR G+ L+S D +VV EAS+GE+ +E A D+ LLDL+ Sbjct: 3 NKKEPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLS 62 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M GLE L +L+ + R+++ ++ + + V L+ GA+GYL KD +L +AL Sbjct: 63 MPHMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALR 122 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAG L E +L + L+ RER++L+LI G IA +L Sbjct: 123 TVAAGGRYLGEREAELLIDGALEE----PEEPAALSTREREVLELIVHGYSLSTIADKLY 178 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV + +L+K+ E + + I Sbjct: 179 LSIKTVSTYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 1/210 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ++LL+DD ++R G++ ++ +I VVGEAS+G Q + L PD++++D+ MP + Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 66 NGLETLDKLREKSLSG-RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +GL + ++ +I+V + ++ V AL+ GA+G+LLK P ++++A+ Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + E +L +A A LT RE D+L+LI++GL N IA RL + Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK HV +L K+ + R +A + ++ Sbjct: 208 QTVKSHVSSVLAKLGARDRTQAVIIAYESG 237 >UniRef50_C1YGP4 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YGP4_NOCDA Length = 225 Score = 253 bits (647), Expect = 3e-66, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 126/226 (55%), Gaps = 15/226 (6%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP--DLILL 58 M+ ++L++DD ++R G+++L+ + + VVG+A++G + +E + DP D+ L+ Sbjct: 1 MTT---VSVLIVDDQILMRQGLRKLLEIEEGVDVVGDAADGVEALEFLSAADPLPDVALV 57 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D MP M+G+ + ++R + +V + + +E V L+ GA GYLLKD+ PE+L+ Sbjct: 58 DARMPRMDGVALIGRMRAEYPDVPALVLTTFDDDELVFGGLRAGARGYLLKDVPPEELVA 117 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRA----------NRATTERDVNQLTPRERDILKLIA 168 A+ + A GE VL +L A+L R + +L+ RE ++ +L+ Sbjct: 118 AIRRVARGETVLGGPAAELLVAALGEGPSTVPAADPPRPPGHGEAPRLSEREEEVARLVG 177 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 G N+ +AR L ITE T K HV +L+K+ L+ R A+WV + R Sbjct: 178 TGATNREVARALFITEGTAKNHVTSILRKLGLRDRTRLALWVRERR 223 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 115/210 (54%), Gaps = 3/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DDH ++R G++ ++ D VVGEA+ G + +L L P +ILLDL+MPG N Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE + +LR + RI+V ++ E+ VV A + GA GYL K+ +L++AL + AAG Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +S A+ LA L+ + L+ RE ++ + I G IA L ++ T Sbjct: 122 GTYVSPAMAEKLALGLQEK---PDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V + +++K++L+S + + R+F Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARLF 208 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 121/211 (57%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD +LR + L+ APD+ V+G A +GE+ + +A + PD++L+D+ MP ++ Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ R+++ + + +E V AL+ GA G+LLKD P DLL A+ A+G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 127 EMVLSEALTPVLAASLRANRATTE-RDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E +LS ++T L A A ++ +T RER++L+L+A+GL N I L ++ Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T+K HV +L K+ + R + + ++ + Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYESGLV 281 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 128/224 (57%), Gaps = 10/224 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS + IL+ DD P++ ++ L+ AP +T VG +NG + +E +++PD++L+D+ Sbjct: 1 MSEE--LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDM 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M+G+E ++++ + R++ + E+ +V AL+ GA GYLLKD EP +L A+ Sbjct: 59 QMPLMDGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRA--------TTERDVNQLTPRERDILKLIAQGLP 172 GE VLS A+ L AS+ +R D + LT RE +L+L+A+G Sbjct: 119 QAVHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQS 178 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 N IA L ++ESTVK ++ ++ K++++ RV+ + Q + Sbjct: 179 NPEIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLV 222 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 60/202 (29%), Positives = 117/202 (57%), Gaps = 1/202 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DD+P + G+K ++ + + VV +N ++ IE E D++L+D+ MP M+G Sbjct: 5 KVLIVDDNPAVLDGLKIILELE-NFEVVSLCTNAKEAIEFLEKKHADVVLMDIRMPVMDG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E ++ K + ++++ + E+ + +L GADGY+LK + + ++ ++ G+ Sbjct: 64 IEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGADGYILKSSDAKHIVNSILSVLDGK 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +V+ + + ++ L+ LT RE +I KLI+QG NK IAR L I+E TV Sbjct: 124 VVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLFISEGTV 183 Query: 188 KVHVKHMLKKMKLKSRVEAAVW 209 + ++ +L+K+ LK+R + AV+ Sbjct: 184 RNYITSILQKLNLKNRTQIAVY 205 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 117/223 (52%), Gaps = 13/223 (5%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDHP+ R GV+ +S DI ++GE S+ E+G+ L +PD++L DLN+P M+ Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPNMD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE +R + + +V+ SV +E AL+ GA Y K++ P+ L L + A G Sbjct: 65 GLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVARG 124 Query: 127 EMVL------SEALTPVLAASLRANRAT--TERDVN-----QLTPRERDILKLIAQGLPN 173 E V+ + + R + E D++ L+ RE ++L+ IA G N Sbjct: 125 EYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGATN 184 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K IA L I+ TVK H+ +L+K+ L R +A ++ + Sbjct: 185 KDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWI 227 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 75/217 (34%), Positives = 122/217 (56%), Gaps = 5/217 (2%) Query: 3 NQEP-ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 N +P +++ DD ++RTG++ ++ P I VVG A +G + +ELA L PD+ L+D+ Sbjct: 18 NPDPDIRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIR 77 Query: 62 MPGMNGLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MP M+G++ L + +VV + + +E V AL+ GA G+LLKD P+ L +A Sbjct: 78 MPVMDGIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQA 137 Query: 120 LHQAAAGEMVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 +H AA G+ +++ +T L A+ + V LT RE +L +A G N IA Sbjct: 138 VHAAACGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIA 197 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 L I+ STVK H+ ++ K+ ++RVE A+W +Q Sbjct: 198 ADLHISLSTVKTHIASLMAKLGARNRVEIALWAYQTG 234 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 121/215 (56%), Gaps = 4/215 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P + + DDH + R G+ ++ + +I VV A NG++ I+ ++ PD+IL+DL MP M Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++ K +++V S+ + E+ ++ L+ GA+GYLLK+ +P++L+ A+ A Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 126 GEMVLSEALTPVLAASL----RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 + + ++ V+ L RA + +LT RE+++L+LI + L +A +L Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H K++L+K K+ V+ + + Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELV 216 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DDH ++R G+K ++++ I VV EA+NG + I A+ L PD++++DL MP MN Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + ++ R +V S+ V+ K GA GYLLKD E+L+ A+H A+G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 127 EMVLSEALTPVLAASL-RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E L +T ++ + A + QL+ RER++L+LIA G K IA ++ Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV V ++KK+ L + + + +E + Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_C4KQQ0 Transcriptional regulatory protein DegU (Protease production enhancerprotein) n=83 Tax=Betaproteobacteria RepID=C4KQQ0_BURPS Length = 233 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 99/223 (44%), Positives = 145/223 (65%), Gaps = 14/223 (6%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LLIDDH + R+GVK L+ PD VV EAS+G +G++ A+ PD+ILLDLNMPG++ Sbjct: 3 IRVLLIDDHTLFRSGVKLLLQRQPDFEVVDEASDGVEGVKRAKQHQPDVILLDLNMPGLS 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLETL L + S +V+ +VS E++ TAL+ GA G+L+K+++ E L+ + +AAAG Sbjct: 63 GLETLQLLVQDVPSAHVVILTVSEDAEELTTALRDGACGFLVKNIDAETLVAGIRKAAAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTER--------------DVNQLTPRERDILKLIAQGLP 172 E V++E++T ASLRA D +QLTPRE DI++ +A+G Sbjct: 123 EPVIAESMTAKWIASLRAPVPAARPAPAAALAPAAHASVDPDQLTPREHDIVRALARGAS 182 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 NK IAR D+ ESTVK+HV+++LKK+ L SRV+ AV+ + + Sbjct: 183 NKEIAREFDVAESTVKIHVQNVLKKLNLSSRVQIAVYAVERGL 225 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 3/210 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +LLIDDH + R G+++L+ I VG +GE GI+LA L PD+ILLD+ MP MNG Sbjct: 4 RVLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE L +LR+ L IV+ + S E+D+V L+ GA GYLLK+MEP DL+ AL + G+ Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 128 MVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 V++ L +L ++ + A ++LTPRE +IL L+A+G NK+IAR L I++ Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK+HVK +L+K+ + SRVEAAV Q+ + Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQQGL 212 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 252 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 71/209 (33%), Positives = 122/209 (58%), Gaps = 6/209 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD-PDLILLDLNMPGMNG 67 I+L+DDH ++R G+K L+S V+ + +NG + +E + PDLI++DL MP +NG Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +++ K +++V S EE V+ + GADGY +KD EP+ L+ + Q AAGE Sbjct: 66 IEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAGE 125 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + + V R + N L+ RE ++LK +++GL NK IA +L ++E TV Sbjct: 126 QIFHPDVMKV-----RKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV H+ K+++ R +A+++ + ++ Sbjct: 181 KTHVSHIFAKLEVGDRTQASMYGVKYKLI 209 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 2/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P I+L+DDH ++R GV+ ++ + VVGEA NG ++L + PD++L+D+ +PGM Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L S ++++ S+ + E VV+A++ GA ++LK +LL AL A Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GEMVLSEALTPVLAASLRAN--RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G LS ++ L ++ + L+PRE +L+L+A+G +K IA LD+ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ + K M+KK+ + + I Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI 213 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 120/210 (57%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH ++R G++++I + DI V+ EASNG++ I+L PD+ ++D++MPG++ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE + +L + +++ ++ E+ VV A++ GA GY+ K PE L+ A+ + +G Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L+E +LA + + + ++ L+ RE +L+ +A G N+ IA I+ T Sbjct: 122 SRFLTEEAAELLALRV-SRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V + +LKK+ L++ + + + Q + Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS + +LL++D P+ R G+ ++ P I +V EA +GE + LA P L+LLD+ Sbjct: 1 MSGR--VRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDI 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +PG++G +TL +L+++ R++V + V L+ GADGY LK + P+ LL + Sbjct: 59 GLPGLDGRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + +AG + + ++ + + LT RER++L IA+G N I R+L Sbjct: 119 REVSAGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQL 178 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+VHV +L+K+ R +AAV ++ + Sbjct: 179 HISSGTVRVHVHAILRKLGATDRTQAAVLALEKGLI 214 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 116/211 (54%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E +L++DDHP++R G++ ++ + + EA+ + + + ++ +D+ +P Sbjct: 52 ERIRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPD 111 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+E ++ R+++ ++++ E+ V +L+ GA GY+LKD +P+ ++ AL A Sbjct: 112 GDGVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVA 171 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G +VL + P + +L+ ++LTPRERDIL+ +A G N IARR ++E Sbjct: 172 GGGLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSE 231 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ + + K+ + RV+AA+ + Sbjct: 232 KTVRNQLSAVFAKLGVTDRVQAALLARDAGL 262 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 252 bits (644), Expect = 8e-66, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDH ++R GV+ L+ P ++VVGEA +G++ + ++ D++L+DL+MP M+ Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + R++V + + E V L GA GY+LKD EP DLL A+H AA G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E+ + + L A ++L+PRE +L+L+AQGL NK +AR L ITE T Sbjct: 122 EVPIDPRVAGALL-----PSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK H+ + +++ + R AA+W Sbjct: 177 VKAHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I L+DDH +LR G+K ++S + GE+ + E+ ++ L+PDL++ D++MPG++ Sbjct: 6 TKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLS 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + LR++ + R ++ S ++ E V L+ G +GY+LKD DLL+A+ G Sbjct: 64 GIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKG 123 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQ------LTPRERDILKLIAQGLPNKMIARRL 180 E LS +T + + E + + L+ RER+ILKL+A+G N+ I + L Sbjct: 124 ETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKIL 183 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ +TVKVH +++KK+ L + ++ + + Sbjct: 184 GISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLI 219 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 123/218 (56%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+++ + L DDHP++ G++ L++ P+I +VGEA++G + + + + DPD+ ++D+ Sbjct: 1 MTDR--IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDV 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG+NGLE +++ R++V +V V LK GA GYLLK EDLL+A+ Sbjct: 59 SMPGLNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAV 118 Query: 121 HQAAAGEMVLSEALTPVLAA--SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AAG + L ++ A + TE L+PRE D+L+LIAQG NK IAR Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R D++ +++ + +K+ L++R E + Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWL 216 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 252 bits (644), Expect = 9e-66, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Query: 25 LISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV 84 ++ PD+ +VGEA GE+ +EL ++L PD++++D+++P M+G+E ++E R++ Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 85 VFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRA 144 ++ E V+ L+ GAD Y++K DL+ A+ G+ VL A+T + + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 145 NRATT---ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLK 201 + LTPRER+IL LIA+GL N IARRL I+E TV+ H +ML K+ + Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 202 SRVEAAVWVHQERIF 216 R E + ++ + Sbjct: 181 DRTELVRYAIRQGLV 195 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +L++DDH + RTGV +S+ DI VVGEA +G + +E + +D D+ L+D+ MP Sbjct: 2 EKTIRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M G+E + K+ E ++ ++ + + D+V K G G++LK ++L+ A+ Sbjct: 62 RMGGVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 + G+ + L + + ER +++L+ RE ++L +AQGL + IA RL ++ Sbjct: 122 SGGDNYVDSRAAGKLLNCF-SEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLS 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + TVK H+ H+L K+K+ R +A W + + Sbjct: 181 DKTVKNHISHILAKLKVSDRTQAVAWAWRSGL 212 >UniRef50_B2KE01 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE01_ELUMP Length = 225 Score = 251 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 115/214 (53%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 ++ ++++DD + R G+K +++ + VVGE S+GE+ + LA+ L PD+IL+D+ + Sbjct: 4 KKKKIRVVIVDDQTLFREGIKDVLTGEKWLEVVGEGSDGEEAVALAKKLKPDVILMDIKL 63 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ K+RE + + +++ S E V+ A++ GA+GYL K + +LL ++ Sbjct: 64 PKLDGISATRKIREDNPAINVLMLSSFEDEAHVIEAIQAGANGYLSKMLPASELLNSIKT 123 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + +++ + L L LR LT E ++ L+ +GL NK +A L Sbjct: 124 FTSEGLMIPQQLMGKLLHGLRKMGDNGTPSQALLTRTEIKVISLLGKGLSNKELATELSC 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T+K H+ K+ + SR EA V ++ + Sbjct: 184 SVKTIKNHLNSAFHKLGVGSRTEAVVKAIEKGLI 217 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 251 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 2/218 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + ILL DDH ++R G++ L+ + D + EAS+G ++ AE L PD+++LDL Sbjct: 1 MTTELKTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MP +NGLE ++ R+++ ++ E+ V AL G GY+LK DL A+ Sbjct: 61 SMPELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 GE + L + A+ A R + LTPRER+IL+L+A+G N+ + + Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L+I+ T + H ++ K+ + S + + + + Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_A5WD77 Two component transcriptional regulator, LuxR family n=3 Tax=Moraxellaceae RepID=A5WD77_PSYWF Length = 219 Score = 250 bits (641), Expect = 2e-65, Method: Composition-based stats. Identities = 96/212 (45%), Positives = 141/212 (66%), Gaps = 2/212 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + PA ILL+DDHPMLR G+ L+S+ PD VV + S+GE+ + DL++LD N Sbjct: 7 TATSPAKILLVDDHPMLRRGMADLLSLEPDFQVVADVSSGEEALSYLAQNQVDLVILDQN 66 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG++GL+T +++RE+ ++++F+VS+ +D+ ALK G +GYLLKDM+PE + + Sbjct: 67 MPGLSGLDTAEQIREQGHQAKVLMFTVSDSGDDIHNALKLGVNGYLLKDMQPEQVALDIR 126 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 +A GE+V+S L VLA +LR + V+ LT RE ++K+IA+G NKMI L Sbjct: 127 KALRGELVVSSRLAAVLAQALRT--PNLDDIVSNLTSRELQVVKMIAKGHSNKMIGNELG 184 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 I+ESTVKVHVKH+L K L++RV+ AVW Sbjct: 185 ISESTVKVHVKHILNKTNLRTRVDVAVWAVNN 216 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 130/214 (60%), Gaps = 3/214 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +++DDH ++R G+ ++IS D+ + G+ +GE+ + ++ +PD+ILLD+NMPG Sbjct: 4 NKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMPG 63 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 NG+ETL L+ ++V+ +V N ++ ++ ++ GAD Y+LK+ +++ A+ Sbjct: 64 KNGIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNVY 123 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNKMIARRLD 181 GE + ++L + ++++ A +++ LT RE +IL I++GL NK IA +L Sbjct: 124 LGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKLF 183 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++E TVK ++ + KK++++ RV+A ++ + I Sbjct: 184 LSEKTVKNYITSIFKKIEVEDRVQATIYAIRNNI 217 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 250 bits (640), Expect = 2e-65, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 122/209 (58%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 IL+++D P+++ G++Q +S P+ ++G+A +G G++ A L PDL+++D+ +P ++G Sbjct: 39 RILIVEDDPLMQLGLEQALSEHPNFEIIGQAEDGYTGVQQALELKPDLVVMDIGLPRLDG 98 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + +++E+ + +V+ + + +VV AL GAD Y +K E LL A+ A G Sbjct: 99 IAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQDGA 158 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L + ++ +L++ +++ L+ RE ++LKLI +G N IA L ++ +T+ Sbjct: 159 TYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTNTI 218 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV+ ++ K+ + RV+AAV + + Sbjct: 219 KTHVRGIMNKLAVDDRVQAAVVALRSGLV 247 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 124/218 (56%), Gaps = 7/218 (3%) Query: 1 MSN--QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 MSN + P ++ ++DDHPM++ G+K +S DI +VG +G + A L PD+IL+ Sbjct: 1 MSNLKELPVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D++MP MNG++ + + E+ ++++ S+ ++ E V +A++ GA GYLLKD E++ Sbjct: 61 DISMPTMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYY 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ A G+ S ++ +L + + +LT RE+ +L +A+G +K IA+ Sbjct: 121 AIKAVANGKTHFSSSIAKLLIDN-----PVNTNESEKLTTREQVVLSYLAKGKTSKEIAK 175 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L+I+ TV+ H ++M K+ + S + + + I Sbjct: 176 ILNISFRTVEAHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 119/209 (56%), Gaps = 2/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 T+++ DDH ++R G+K ++ I+V+G A NGE+ + L L+PD+ L+DL+MP + Sbjct: 5 VTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKS 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + +L + + + + + + +AL GA GY+LK ++L+ A+ G Sbjct: 65 GVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 127 EMVLSEALTPVLAAS-LRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 ++ L+ ++ +A L+ +R+ + + LT RER++LK + G N+ IA L I+ Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TV+ H + +KK+ L+S+ E + + + Sbjct: 184 TVEKHRSNFMKKLGLRSKAELKAYSEELK 212 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 250 bits (640), Expect = 3e-65, Method: Composition-based stats. Identities = 77/213 (36%), Positives = 122/213 (57%), Gaps = 10/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + ILL+DDH ++R G+ S PD+ VV + NG + IE + PD+++LDL M Sbjct: 7 SDKIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMH 66 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 GM+G++ + LR + + R++V+S E+V ALK GA G+++K+M E LL+A+ + Sbjct: 67 GMSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKV 126 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AGE + + + ER + QL+PRE D+LKL+A+G NK IA L + Sbjct: 127 HAGEQYVPPEIAMRM----------GERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVV 176 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E T K+HV ++L K+ + R +A V + I Sbjct: 177 EGTAKIHVANILTKLGVSDRTQAIVVAVRRGII 209 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 73/226 (32%), Positives = 122/226 (53%), Gaps = 16/226 (7%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDHP R G++++I P+ VVGEA++GE+ I + + PDL+L+D+NMPGM Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE +L+ S +IV+ +VS+ + A+KRGA GYL K++ P + L Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 127 EMVLSEALTPVLAASLRANRATTERDV----------------NQLTPRERDILKLIAQG 170 E +S+ + L + + + LT RE+DIL+ + G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 171 LPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 NK IA ++E TVK H+K++L+K+ L +RV+ + +++ + Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQGML 233 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 249 bits (638), Expect = 4e-65, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 118/208 (56%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++LL DD M+R+ ++ +I + D+ VVGEAS+GE I +A L PD++++D+ MP M+ Sbjct: 3 VSVLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ +R S ++ + + +E + L+ GA G++LK LL+ + A G Sbjct: 63 GVAATRSIRSASSPPAVLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVARG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E +S T L + T + ++T RERD+L L+ + + N IA RL I EST Sbjct: 123 EGFVSPGPTRRLIERVSVPEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEEST 182 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQER 214 VK HV+++L K+ ++RV+AA+ + Sbjct: 183 VKYHVQNLLTKLDARTRVQAALIASRAG 210 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 249 bits (638), Expect = 5e-65, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 9/210 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL+DDH +LR G+ L++ + V+G+A +G I+L +L PD+++ DL M M+ Sbjct: 6 IRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDLRMVPMD 65 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G E +R + + R+++ + + +E+V L+ GA YLLKD+EP L+ +H AG Sbjct: 66 GTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTVHAVYAG 125 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + ++ LA + + + LT R+ ++L+ +A+G N IA L I+E T Sbjct: 126 RKAIDPSIAAKLAEHVAS---------DALTARQLEVLRSLAEGRSNIEIANTLYISEGT 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+K +L+K+ + R +A + + Sbjct: 177 VKAHIKAILQKLGARDRTQAVTIGIKRGLI 206 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 81/209 (38%), Positives = 133/209 (63%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+L+DDH + R G+ +L+ + +I V N ++ L ++ PD+++LDLNMPG + Sbjct: 4 TRIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNPDEVAMLLKAHRPDVLILDLNMPGTD 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ + +LR + I++ ++S E+D+ AL+ GA+GYLLK MEP++++ A+ +A G Sbjct: 64 GITLMQQLRNAGFALPILILTLSETEDDLARALRAGANGYLLKSMEPDEVVDAILRAQRG 123 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E V++ A+T L ++ LTPRER+IL +++G NK IAR LDI+ T Sbjct: 124 ETVVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLDISHDT 183 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK+HV+H+L K+ L SRVEAAV+ + ++ Sbjct: 184 VKLHVRHILAKLNLSSRVEAAVFAVEHKV 212 >UniRef50_C4RI73 Two-component system response regulator n=6 Tax=Actinomycetales RepID=C4RI73_9ACTO Length = 217 Score = 249 bits (637), Expect = 6e-65, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 121/210 (57%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+++DD ++R+G++ ++ +APDI VV AS G + I+ PD++LLD+ MP ++ Sbjct: 2 VRIVVVDDDALVRSGLRLILRVAPDIEVVATAS-GAEAIDEITRHRPDVVLLDIRMPDVD 60 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL L ++R + + + + +E + TAL+ GA G++LKD PE L + + AAG Sbjct: 61 GLTVLRQVRAMPHPPTVAMLTTFDADEYITTALRIGAAGFILKDTHPEHLAQLVRALAAG 120 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +VLS ++ + N + +LT RER+IL +A GL N I R+ ++ T Sbjct: 121 AVVLSPKVSRTVVDWRVENGEDAASAIARLTDREREILVHVADGLSNAEIGTRMYLSGGT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV +L K+K+ SRV+AA+ + + Sbjct: 181 VKDHVSAILTKLKVTSRVQAALIAQRAGLL 210 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 66/211 (31%), Positives = 118/211 (55%), Gaps = 3/211 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I + DDH +LR G+++++S + I VVGEASNG + +E+ + PD++LLD+ MP + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +++ +I++ S+ E+ + L+ GA+G++ K E+LLKA+ G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + L + + A R R E+ + L+ RE ++ +AQG+ N+ IA L I+ Sbjct: 122 QRYLPDKIATSFAE--RHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISVK 179 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV H H+LKK++L++ + + Q Sbjct: 180 TVDTHRSHVLKKLELRNNSDITRFAIQHGYI 210 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 248 bits (636), Expect = 7e-65, Method: Composition-based stats. Identities = 74/218 (33%), Positives = 122/218 (55%), Gaps = 11/218 (5%) Query: 1 MSNQE-PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLD 59 M+ P +L++DDHP+LR G+ L+ PD+ ++GEA++GE+ I + L PD++L+D Sbjct: 1 MTESPAPIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMD 60 Query: 60 LNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 L MP ++G+E + ++R RI+V + + V AL+ GA YLLKDM +L+ Sbjct: 61 LQMPRLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDT 120 Query: 120 LHQAAAG-EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 + A G + A+ +AA + +R L+PRE ++L+ +A GL NK I Sbjct: 121 IRMVAGGRRAPIPPAVAASIAAHVVEDR---------LSPRETEVLRHVAGGLSNKRIGE 171 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R+ I+E TVK H+K ++ K+ + R A + I Sbjct: 172 RMQISEQTVKAHMKSLMDKLGVGDRTHAVTQALRRGII 209 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 248 bits (635), Expect = 8e-65, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 8/211 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG-M 65 I+L+DDHP+LR G++ L+ D VVG+ + E+ L +S PD++L+DL + G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ R S S ++VF+ + + D V +L GA GYLLKD P +L A+ A Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G LS A+ L +RA + LTPRE ++L L+A G N+ + RL ++E+ Sbjct: 122 GGSALSPAVASRLMDRMRAPQ-------ESLTPREIEVLALLATGRTNRQVGERLFVSET 174 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV H+ K+ + +R A +E + Sbjct: 175 TVKTHVNHIFTKLGVDTRAAAVSRAMKEGLI 205 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 TILL +D ++R G+K +I V+ EA NG++ ++LA DL+L+D+ MP M G Sbjct: 3 TILLAEDQQIVRQGLKMMIEHRQRYQVI-EAENGQEAVDLAGRHVIDLVLMDVRMPVMTG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +L E+ + +IV+ + E + ALK GA GY+LKD + E L + +A GE Sbjct: 62 IEATKRLIERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGE 121 Query: 128 MVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +VL + + L + A E++ + L RE++I++L+ QG N IA L ++ T Sbjct: 122 LVLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK ++ + K+ ++ R + A++ + I Sbjct: 182 VKNYISQLFIKLGVRDRTQLAIFAVKHDI 210 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 248 bits (635), Expect = 9e-65, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDH ++RTG+ LI+ A D+ VVG A++G + +E L P ++L+DL+MP ++ Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++ E+ S ++V + + + V+ AL GA GY+LKD EP DLL A+ A G Sbjct: 62 GVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + + + R+ E LT RE+++L L+ GL NK IARRL I EST Sbjct: 122 HSPLDPRVARTVLHARRSPVRAAE-----LTEREQEVLALVGHGLANKQIARRLGIREST 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK H+ + +++ ++ R A +W Sbjct: 177 VKAHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 248 bits (635), Expect = 1e-64, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD P++R G+K LI D+ + GEA +G+ + L PD++LLD+ MP ++ Sbjct: 2 IRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLD 61 Query: 67 GLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 GL L + R+V+ + +E V AL+ GA G++LKD EP DLL+A+ A Sbjct: 62 GLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AGE +LS +T + + A D+ LT RER+++ L+ GL N IA RL I+ Sbjct: 122 AGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVIS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +T + HV ++ K+ + R + AV +Q + Sbjct: 182 PATARTHVSRVMVKLSARDRAQLAVLANQAGL 213 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 126/218 (57%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N ++L+++DH +LR G++ ++S V GEA +G + +LA SL PDLIL+DL Sbjct: 1 MNNN--CSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 ++PGMNG++ + ++ +S RI+ SV ++E V AL+ G DGY+LKD +DL+ A+ Sbjct: 59 SLPGMNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAM 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANR--ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 G+ LS L L S + +T + + LT RER +LKL+A+G N+ + Sbjct: 119 RVVLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGI 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++++ T++ + +++K+ + + E + + Sbjct: 179 YMNLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 113/204 (55%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +++ DD ++ G++ ++ PD+ VVG A NG++ +E + PD+ LLD++MP Sbjct: 2 SKIRVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMPV 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E L +++ +++ + + +E ++ A + GADGYLLKDM E L+ A+ A Sbjct: 62 MSGIEALKEIKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRNAF 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G + + ++ + + + LT RE +I L+A+G N++I+ L I+ Sbjct: 122 NGNVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGISL 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAV 208 TVK ++ + K++ SR EA + Sbjct: 182 GTVKNYISVIYSKLEANSRQEAIL 205 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 89/211 (42%), Positives = 141/211 (66%), Gaps = 5/211 (2%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q+ +LLIDDHP++R G+KQL+ + + VV + S+G +GI +A PD+I+LDLNM Sbjct: 2 QDKLKVLLIDDHPLMRRGIKQLVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLNMK 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++GL+TL LR + + RI++ +VS+ + D+ T + GADGYLLKD EP+ LL+ + + Sbjct: 62 GLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A GE++LS+++ +L R + ++ LT RE +L+ IA GL NK IA +L I+ Sbjct: 122 AQGEVILSDSIKNLLL-----ERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFIS 176 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 E TVKVH++++L+K+ + SRV A V ++ Sbjct: 177 EETVKVHIRNLLRKLNVHSRVAATVLFFEQN 207 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M I+ +DDHP++ G+ LI PD+T+VG S + PD+ L+DL Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDL 64 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P NG++T+ + ++ RI++ ++ + ++ ALK GA GY+LK+M PEDLL+ + Sbjct: 65 RLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVI 124 Query: 121 HQAAAGE-MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 + +GE L + LA LT RE ++L+LI++G NK + R Sbjct: 125 RKVHSGEKKRLHPVIAATLADHF---------GEENLTSRETEVLQLISEGNSNKEVGNR 175 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+E TVK HVK++L K+ R +A + I Sbjct: 176 LSISEETVKGHVKNILGKLGANDRTQAVSIAVRRGII 212 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 2/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P IL+ DDH ++R G++ L+ + V A NG Q + LA PD++++D+ MP M Sbjct: 2 PPRILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNM 60 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG +K+ + R++ S+ + GA Y+LKD +L A+ Sbjct: 61 NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGR 120 Query: 126 GEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ +S ++ LA S + T ++ +++PRER++L+LIA+G+ + IA RL ++ Sbjct: 121 GKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSI 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H ++++ K+ + S + QE + Sbjct: 181 KTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_Q73CG3 DNA-binding response regulator, LuxR family n=10 Tax=Firmicutes RepID=Q73CG3_BACC1 Length = 214 Score = 248 bits (634), Expect = 1e-64, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 122/211 (57%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +L++DDH ++R G+K +I + ++GEA+NGE+ + E PD+IL+DLNMP M Sbjct: 2 KYNVLIVDDHFVVREGLKLIIETSDSFQIIGEATNGEEALSFIEKKKPDVILMDLNMPKM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GLET++ L +K I++ + N +E ++ ++ GA GYLLKD + E+L + L A Sbjct: 62 SGLETIEVLNKKQNHTPIIILTTYNEDELMLKGIELGAKGYLLKDTDRENLFRTLEAAIR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE++L + + R + N LT +E +LK IA+G NK IA + I E Sbjct: 122 GEILLQPNIMEKIVNYKRKEIHANVVEENNLTEKELFVLKAIARGNKNKDIAFDMGIAER 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK ++ ++ K+ + SR EA ++++ Sbjct: 182 TVKAYLTNIYNKLGVNSRSEAVAVSIEKKLI 212 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 121/210 (57%), Gaps = 4/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL+ +D ++R G+ L+ D+T+VGEA +G+ IE+A +L PD++L+DL+MP ++ Sbjct: 3 VRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPELD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++++ + R++V +V+N E V AL GADGY LK + +L+ A++ AG Sbjct: 62 GVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCAG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L L+ L ++ LT RER++L+LIA+G N+ IA L I T Sbjct: 122 KTYLGPGLSEDLVKEYLEG---SDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H +++K+ L + E A + + + Sbjct: 179 VETHRTKIMQKLDLHNSAELAAYAIRRGLI 208 >UniRef50_C7MXL4 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=3 Tax=Actinomycetales RepID=C7MXL4_SACVD Length = 239 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 113/208 (54%), Gaps = 1/208 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++ L+DDH ++R G+ L+ PD+ +VGEA++ + + D+ +LD+ +P N Sbjct: 3 ISVFLVDDHEIVRRGLTDLLEAEPDMRIVGEAASAGEALARIPGTGADVAVLDVRLPDGN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L R ++ + +E + A+ GA G++LK + DL+ A+ +G Sbjct: 63 GVELCRELLSTVPGLRCLMLTSYADDEALFNAIMAGASGFVLKQVLGSDLVSAVRTVGSG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +L T L +R R ++ V+ L+ +ER +L LI +GL N+ IA RL + E T Sbjct: 123 GSLLDSKTTSALMNRIRREREESD-PVSGLSEQERAVLDLIGEGLTNREIAARLYLAEKT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQER 214 VK +V +L K+ ++ R +AAV + R Sbjct: 182 VKNYVSRLLGKLGMQRRTQAAVLATELR 209 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 247 bits (633), Expect = 2e-64, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 122/216 (56%), Gaps = 6/216 (2%) Query: 7 ATILLIDDHPMLRTG-VKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +LL DD M+R G + DITVVGEA +G + I +A L PD+ L+D+ MP + Sbjct: 3 IKVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPKL 62 Query: 66 NGLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +G+E L + + R++V + + +E V AL+ GA G++LKD P L++A+ A Sbjct: 63 DGIEVTRALAGPKAADPMRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRAA 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDV---NQLTPRERDILKLIAQGLPNKMIARRL 180 GE ++S ++T L L ++A ++L+ R ++++ IA+G N+ IA L Sbjct: 123 YNGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAEL 182 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ STVK H+ + K+ +++R E AVW + R+ Sbjct: 183 FISLSTVKSHLSGIQTKLGVRNRTEIAVWAWENRVV 218 >UniRef50_C7MI23 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcineae RepID=C7MI23_BRAFD Length = 238 Score = 247 bits (632), Expect = 2e-64, Method: Composition-based stats. Identities = 84/218 (38%), Positives = 121/218 (55%), Gaps = 9/218 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 P +L+ DDHP + +G+ L+ APD+ VV +A +GE + A PD++L D+ MP Sbjct: 22 SAPIRVLVADDHPAVLSGLVALLDSAPDLAVVAQAGDGETALAAAREHRPDVVLTDVRMP 81 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G G+E LRE ++V S + +E V+ AL GADGYL+K +P+ +L A+ Sbjct: 82 GATGIEITPALRETG--AHVLVISGFDLDEYVLGALAAGADGYLVKTEDPQRILAAVRDV 139 Query: 124 AAGEMVLSEALTPVLAASLRANRATTER-------DVNQLTPRERDILKLIAQGLPNKMI 176 G+ VLS A T + A LR + T RE D+L L+AQG N+ I Sbjct: 140 HRGDAVLSAAATRAVVAELRGRASGHPAAGRSAVGPEPPFTRREEDVLALVAQGRTNQQI 199 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 AR L + +TVK H+ H L K++L SRV+AA+W Q R Sbjct: 200 ARELFVEVTTVKSHLSHALVKLQLDSRVQAALWWQQHR 237 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 69/218 (31%), Positives = 123/218 (56%), Gaps = 4/218 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + + IL+ DDH + R G+++L+ P+ V+GEA++G + ++ A L PD++LLDL Sbjct: 5 TATKTVRILIADDHTIFRDGLRRLLESEPEFDVIGEAADGGEAVQQARRLGPDVLLLDLA 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP + GL+ L +L S +I++ + + + +V AL+ GA G +LK+ + LLK + Sbjct: 65 MPRVPGLDALRELTTDDSSTKIIILTAAIEKAQIVQALQAGAKGIILKESATQLLLKGIR 124 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIA 177 AG+ + + L++ A + D LT RE +IL I G NK IA Sbjct: 125 SVMAGQYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEIA 184 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++ +++E TVK H+ ++ K+ + SR+E A++ +R+ Sbjct: 185 KKFNLSEDTVKHHLTNIFDKVGVSSRLELALFAINQRL 222 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 61/217 (28%), Positives = 119/217 (54%), Gaps = 7/217 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++ ++Q++ D VVG+A +G + + L E L PD++L+D+ MP MN Sbjct: 381 IRLLVVDDQALITNSLEQILENQTDFIVVGKAYDGSEALILCEQLQPDIVLMDIQMPEMN 440 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E L +++ + + +IV+ + TAL+ GA+GY+LK + P+++ +AL G Sbjct: 441 GIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLIYNG 500 Query: 127 EMVLSEALTPVLAASLRANR-------ATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 + +++ + ++ R +T + LT RE +IL+ ++ GL K IA + Sbjct: 501 GTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSIAAK 560 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L ++E T++ + ++ K+ + +R EA E I Sbjct: 561 LFLSEGTIRNYCSNLYSKLGVSNREEAIKMARTENIL 597 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 119/215 (55%), Gaps = 6/215 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L DD +LR + L+ DI VVGEA +GE+ + L PD++++D+ MPGM+ Sbjct: 16 LRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPGMD 75 Query: 67 GLETLDKLREKS--LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 GL ++ + R+++ + +E V AL+ GA G++ K ++ + L+ A+ A Sbjct: 76 GLTATAQICADPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVRTIA 135 Query: 125 AGEMVLSEALTPVLAASLRANR-ATTERDVNQ---LTPRERDILKLIAQGLPNKMIARRL 180 G+ +LS A T L A A T RDV + LTPRER+++ L+A GL N IA R+ Sbjct: 136 DGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIADRM 195 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++ TV+ HV+ + K++ + R + ++ + Sbjct: 196 YVSPFTVRAHVQRAMTKLEARDRAQLVAIAYRTGL 230 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL DDH M R ++ L++ P++ VV EA++GE+ + +A++ DL+ +D+ MPGM+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L + + R++ S + V L GA GY+ K ++LL+A+ G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + +A +LR + +LT RER +L+LIA+GL + I RL I ST Sbjct: 123 RSYLCPEVAATVADALRDSPGVYA-AAPRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 V+VH +++++K+ L + E + I Sbjct: 182 VEVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 247 bits (631), Expect = 3e-64, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I ++DDHP+ R G+ +SM D +VG+A+NG++ +E +L PD++L+D++MP MNG Sbjct: 2 RIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + ++K +I++ S+ + +E V++ L RG GY LKD+ ++ AL G Sbjct: 62 MDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGG 121 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + S A++ +L S + T LT RE+ +L+L+A GL NK +AR LDI+ T+ Sbjct: 122 IYYSRAISDLLVQSSQEPDKNT-----VLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + H +++ K+ +K+ + + Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 126/213 (59%), Gaps = 1/213 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +I++ DDH ++R G+K L+ + VVGEA++G++ I+ ++LDP++++LD+ MP Sbjct: 3 KKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPK 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+E + ++++ + + +V S+ ++ E V+ +++ GA YLLK+ + E+++KA+ + Sbjct: 63 KSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVS 122 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQ-LTPRERDILKLIAQGLPNKMIARRLDIT 183 AG+ S + ++ L + + LT RE ++LK ++ GL K+IA +L I+ Sbjct: 123 AGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFIS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++KK+ + + E I Sbjct: 183 VRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 246 bits (630), Expect = 3e-64, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 3/210 (1%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 ++ DDH ++R GV+ L+ P TV GEASNG + + LA+ L PD+++LD+ MP +NGLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++R I++ +V + ++ + AL GA GY+LK+ L+ A+ + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 130 LSEALTPV---LAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + AA R + V LT RER++L+L+AQG N+ +A +L I+ T Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H ++++K+ S V+ + + I Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_C1YU02 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1YU02_NOCDA Length = 218 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I L+DD ++R G+ LI+ D+ V G+A +G +L PDL+L+D+ MP ++ Sbjct: 2 IAINLVDDEALIRAGLAALINAEDDMRVTGQADDGADVPDLVRRTRPDLVLMDVRMPRLD 61 Query: 67 GLETLDKLREKSL-SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 G++ L R++V + ++++ V AL+ GA G+LLK PED+L A+ A Sbjct: 62 GIQATRTLHTTLTHPPRVIVLTTFDNDDYVWGALRAGAHGFLLKRTPPEDILAAIRLAHR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G+ +L LAA+ A R V LT RE L L+AQGL N IA RL + Sbjct: 122 GDTLLFPTALRHLAATQPAAPTPAARAVATLTQRESQTLTLMAQGLTNAEIADRLFLGTE 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV H+L K+ ++ R +A + + + Sbjct: 182 TVKTHVSHILTKLGVRDRTQAVIAAYDSGLI 212 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 119/213 (55%), Gaps = 4/213 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DDHP+ R GVK L+ + + VGEA G + + LA+ L PDL+ +D+++P M+G Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E + + + + RI++ S+ + V A K GA GY++K+ L++ GE Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRLDIT 183 + ++ L A L A + ++ LTPRE+ +L+L+A+G + IA ++++ Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++KK+ + S++E + + + Sbjct: 185 PKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217 >UniRef50_B4WJL3 Response regulator receiver domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WJL3_9SYNE Length = 242 Score = 246 bits (630), Expect = 4e-64, Method: Composition-based stats. Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 26/230 (11%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPD----LILLDLNM 62 ILL++D ++R G+ L+S+ D+ ++ EA+NG+ ++ + PD L L+D+ M Sbjct: 2 IKILLVEDQKLIREGLNALLSLESDLAIIAEAANGKIALDWLANAKPDQLPELALIDMRM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M+G+ T + + + +++V + + ++ + ++ GA GYLLKD E+L A+ Sbjct: 62 PVMDGVATTAMISKHYPAIKVLVLTTFDDDQLIAQSMAVGAQGYLLKDTPSEELAAAIRS 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATT----------------------ERDVNQLTPRE 160 A G + + +L A +V LTPRE Sbjct: 122 VAKGYSQFGPGIVQKMIGALPNIAAPPVSRSTRASSALDTSLEANKVDLPPEVAALTPRE 181 Query: 161 RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 ++L I G NK IA++L ++E TVK HV +L ++ L+ R +AA+ Sbjct: 182 TEVLVCIGNGASNKEIAQQLFLSEGTVKNHVTSVLSRLGLRDRTQAALLA 231 >UniRef50_D1XLE6 Two component transcriptional regulator, LuxR family n=3 Tax=Streptomyces RepID=D1XLE6_9ACTO Length = 231 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 117/216 (54%), Gaps = 8/216 (3%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + P ++L++DD P++R G+ ++ DITV G A +GEQ +E L PD++L+D+ MP Sbjct: 12 EGPISVLVVDDEPVIRAGLSAILDSQADITVAGTADDGEQAVEACARLRPDVLLMDIRMP 71 Query: 64 GMNGLETLDKLREKSL----SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 +GL L +L + L R+++ + + + V AL GA G+LLK+ E L +A Sbjct: 72 RRDGLWALAELGRRGLLGPGRSRVLMLTTFDLDAYVDDALTAGASGFLLKNSSYEQLTEA 131 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRATTER----DVNQLTPRERDILKLIAQGLPNKM 175 + AAAG LS A+T + + R + LT RE D+L+LI GL N Sbjct: 132 VRAAAAGHSALSPAVTRRIIEGHLSGRPRPSDQELARLRDLTEREVDVLRLIRDGLSNAE 191 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVH 211 IA L ++ TVK HV +L K +SR +AAV Sbjct: 192 IAGELVVSLHTVKTHVSRVLMKTGCQSRAQAAVLAR 227 >UniRef50_C3PHX2 Two-component system response regulator n=3 Tax=Corynebacterium RepID=C3PHX2_CORA7 Length = 215 Score = 246 bits (629), Expect = 4e-64, Method: Composition-based stats. Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 6/214 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++L+DD LR G++ ++ A DI VV EASNG +G+ L PD++L+D+ MP M+ Sbjct: 2 ISVVLVDDEQALRRGIRFILEGAADIEVVAEASNGREGVARVLDLQPDVVLMDIRMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E KLR + +V+ + + +E +V AL GA G+LLK +EPE L+ A+ AA G Sbjct: 62 GIEAAGKLRASAPDIPVVMLTAFDTDEFIVDALHAGAMGFLLKTIEPEGLVLAVRAAATG 121 Query: 127 EMVLSEALTPVLAASLR------ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + +LS L A R A R + L+ RE ++ +L+AQGL N+ IA +L Sbjct: 122 QQLLSPKALKNLLALKRPEPAPAEPEALEARPLEGLSQRENEVAQLVAQGLDNQEIAGQL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ++ +TVK H+KH+L K+ +RV A+ V + R Sbjct: 182 YVSVTTVKTHIKHILDKLGGTNRVHIAIAVLEAR 215 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 246 bits (629), Expect = 5e-64, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 7/217 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P +++ DD ++R + L + PDI +V EA++G+ + PD++LLD+ MP Sbjct: 2 NPIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMPI 61 Query: 65 MNGLETLDKLREKSLS--GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 M GLE L + E R+++ + + ++ V +L+ GA G+L KD +PE +L A+ Sbjct: 62 MGGLEVLRHI-ETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVRV 120 Query: 123 AAAGEMVLSEALTPVLAASLRANR----ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AAGE +LS +T + R ++ LT RE +IL +A GL N IA Sbjct: 121 VAAGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIAE 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 RL ++ +TV+ HV + K++ + R + V ++ I Sbjct: 181 RLVVSPATVRTHVGRAMMKLRARDRAQLVVIAYRSDI 217 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 118/204 (57%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + ++L DDH + RTG L++ P+ VVG+A++G+Q I+L + L PD+ +LD+ MP Sbjct: 3 DTVRLVLADDHEVTRTGFVSLLAGHPEFEVVGQAADGQQAIDLCQELQPDIAILDIRMPV 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NGL L+++ ++V+F++ + + + A+ GA GYLLKD ++++ L + A Sbjct: 63 LNGLGAARILQQRMPGLKVVIFTMDDSTDHLEAAMSAGAVGYLLKDASRDEVIDGLQRVA 122 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE L+ A++ L + + LTPRER +L L+A G N+ I +L IT Sbjct: 123 RGEEALNSAVSARLLRRMTERNTSGAALPETLTPRERQVLGLVAGGFSNREIGEKLGITT 182 Query: 185 STVKVHVKHMLKKMKLKSRVEAAV 208 T K HV+ ++ K+ R +AAV Sbjct: 183 GTAKAHVEKVIGKLGASDRTQAAV 206 >UniRef50_C8WT63 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WT63_ALIAD Length = 221 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 115/216 (53%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N+ P + + DD+ R + L++ PDI VV +NG + + E + PD++LLD+ Sbjct: 1 MTNELPIRVAIADDNAEYRLTLADLLAYEPDIEVVAVWANGHEVLRDVEQVRPDVLLLDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++GL L + + +IVV ++ V+ A++ G GY++KD EDLL+A+ Sbjct: 61 TMPEVDGLCVLKAVPLLAWRPKIVVLTMHEQSPVVLEAVRAGVSGYIVKDAPMEDLLRAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 +A G ++ + + + ++ + LT RE D+L +A G N+ IA L Sbjct: 121 REAHEGRAMVHPQVMRAVLGEIERYAKPSDGWKDLLTAREFDVLCQMAAGKSNEQIAESL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IT T K HV H+L K+ + R +A + ++ER Sbjct: 181 HITLKTAKNHVSHILAKLNVSDRSQAVLHAYRERWI 216 >UniRef50_C1XWT0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=C1XWT0_9DEIN Length = 206 Score = 245 bits (628), Expect = 6e-64, Method: Composition-based stats. Identities = 74/210 (35%), Positives = 121/210 (57%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + +++DH R G++ + PD+ VVGEA + E+GIE D++L+D+ +PGM+ Sbjct: 2 TRVFIVEDHAFTRDGLRVAVGREPDLQVVGEARSAEEGIEQLAHTSADVVLMDIGLPGMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++E+ R+VV +V E +V+ A+ GAD Y LK +P LL A+ AA G Sbjct: 62 GIEATKLVKERF-GVRVVVLTVHQLEAEVLAAMTAGADAYCLKSTDPASLLLAIRAAAIG 120 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + ++ L + QL+PRE ++L+LIA+GL NK IA+RL I+ ST Sbjct: 121 STYLDPQIAHIVLGQL----SVLSGGQAQLSPRELEVLRLIAEGLSNKEIAQRLGISLST 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H++ +L K+ R +AA+ ++ + Sbjct: 177 VKTHIEELLAKLSASDRTQAAIKAVRQGLL 206 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 245 bits (627), Expect = 7e-64, Method: Composition-based stats. Identities = 64/208 (30%), Positives = 119/208 (57%), Gaps = 7/208 (3%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 IL++DD P++ ++ L+S D+ V A++G I+ E + PD++L+D+ MPGM+G Sbjct: 2 NILIVDDDPLVCQSLRLLLSREADMEVTATANDGAAAIQCCEEVLPDIVLMDIRMPGMDG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ ++++K +I++ + E + AL GA+GY+LK + + + L A+G Sbjct: 62 IQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRALASGS 121 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 V+ + L + NR+ LTPRE DIL+L+A G N+ IA +L I+E TV Sbjct: 122 SVVDANVLKTLMLPEKENRSD-------LTPRENDILELVALGCSNREIAEQLFISEGTV 174 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + + +L K++L+ R + A++ ++ + Sbjct: 175 RNTLSIILDKLELRDRTQLAIYYWRQSL 202 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 312 4e-84 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 307 2e-82 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 305 6e-82 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 299 4e-80 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 299 5e-80 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 297 1e-79 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 297 1e-79 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 297 3e-79 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 293 2e-78 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 292 4e-78 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 292 5e-78 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 292 5e-78 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 291 9e-78 UniRef50_A0K2I9 Two component transcriptional regulator, LuxR fa... 290 2e-77 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 290 2e-77 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 289 6e-77 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 288 6e-77 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 288 7e-77 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 288 8e-77 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 288 9e-77 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 287 2e-76 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 286 3e-76 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 286 3e-76 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 285 5e-76 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 285 6e-76 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 285 6e-76 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 285 8e-76 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 285 1e-75 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 284 1e-75 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 284 1e-75 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 284 1e-75 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 284 2e-75 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 283 2e-75 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 283 3e-75 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 283 3e-75 UniRef50_A3Y699 Putative two component system response regulator... 281 1e-74 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 281 1e-74 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 280 2e-74 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_A9AX03 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 280 3e-74 UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID... 280 3e-74 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 279 4e-74 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 278 1e-73 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 278 1e-73 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 277 1e-73 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 277 1e-73 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 277 1e-73 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 277 1e-73 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 277 2e-73 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 277 2e-73 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 277 3e-73 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 276 3e-73 UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacill... 276 3e-73 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 276 3e-73 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 276 3e-73 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 276 4e-73 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 275 6e-73 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 275 6e-73 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 275 7e-73 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 275 8e-73 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 275 9e-73 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 274 1e-72 UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL ... 274 2e-72 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 273 2e-72 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_A3CKH3 Two-component system transcriptional regulator (... 273 2e-72 UniRef50_UPI0001789C57 two component transcriptional regulator, ... 273 2e-72 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 273 2e-72 UniRef50_C5C7H0 Response regulator containing a CheY-like receiv... 273 2e-72 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 273 2e-72 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 273 3e-72 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 273 3e-72 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 273 4e-72 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 272 4e-72 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 272 4e-72 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 272 7e-72 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 272 7e-72 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 272 8e-72 UniRef50_D1BGN7 Response regulator containing a CheY-like receiv... 272 9e-72 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 271 1e-71 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 271 1e-71 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 270 2e-71 UniRef50_UPI0001789139 two component transcriptional regulator, ... 270 2e-71 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 270 3e-71 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 269 4e-71 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 269 4e-71 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 269 4e-71 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 269 5e-71 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 269 5e-71 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 269 5e-71 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 269 6e-71 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 269 6e-71 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 268 6e-71 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 268 8e-71 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 268 9e-71 UniRef50_A4FAA4 Two component system response regulator n=2 Tax=... 268 9e-71 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 268 1e-70 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 268 1e-70 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 268 1e-70 UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomyceta... 267 1e-70 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 267 1e-70 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 267 2e-70 UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryoc... 267 2e-70 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 267 2e-70 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 266 2e-70 UniRef50_C7NKN7 Response regulator containing a CheY-like receiv... 266 3e-70 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 266 3e-70 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 266 3e-70 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 266 4e-70 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 265 5e-70 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 265 5e-70 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 265 6e-70 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 265 6e-70 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 265 7e-70 UniRef50_A9AZR3 Two component transcriptional regulator, LuxR fa... 265 8e-70 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 265 8e-70 UniRef50_C7QC31 Two component transcriptional regulator, LuxR fa... 265 9e-70 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 265 9e-70 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 265 1e-69 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 265 1e-69 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 265 1e-69 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacilla... 264 1e-69 UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR fa... 264 1e-69 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_P94439 Uncharacterized transcriptional regulatory prote... 264 2e-69 UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacilla... 264 2e-69 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 264 2e-69 UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Act... 264 2e-69 UniRef50_Q04VJ6 Receiver component of a two-component response r... 264 2e-69 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 263 2e-69 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 263 3e-69 UniRef50_C6WIC9 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 263 3e-69 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 263 4e-69 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 262 4e-69 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 262 4e-69 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 262 5e-69 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 262 5e-69 UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Synt... 262 7e-69 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 261 7e-69 UniRef50_D1BXU0 Two component transcriptional regulator, LuxR fa... 261 8e-69 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 261 8e-69 UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22... 261 8e-69 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_C7Q058 Two component transcriptional regulator, LuxR fa... 261 9e-69 UniRef50_D2PZY5 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=... 261 1e-68 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 261 1e-68 UniRef50_B2A7N5 Two component transcriptional regulator, LuxR fa... 261 1e-68 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_D1BUI8 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_A6TVR4 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 260 2e-68 UniRef50_C5C8Q1 Response regulator containing a CheY-like receiv... 260 2e-68 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 260 3e-68 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 260 3e-68 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 260 3e-68 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 260 3e-68 UniRef50_B4B0U5 Two component transcriptional regulator, LuxR fa... 259 4e-68 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 259 5e-68 UniRef50_A8L345 Two component transcriptional regulator, LuxR fa... 259 5e-68 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 259 6e-68 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 259 6e-68 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 259 6e-68 UniRef50_C1A730 NarL family two-component response regulator n=1... 258 7e-68 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 258 8e-68 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 258 9e-68 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_A6M052 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 258 1e-67 UniRef50_C8NKN6 Two component response regulator n=3 Tax=Coryneb... 258 1e-67 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_B2KE01 Two component transcriptional regulator, LuxR fa... 258 1e-67 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 258 1e-67 UniRef50_C9Z3C4 Putative two-component system response regulator... 257 2e-67 UniRef50_A8LG56 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_C4RJG1 Two-component system response regulator receiver... 257 2e-67 UniRef50_D2PZN7 Two component transcriptional regulator, LuxR fa... 257 2e-67 UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanob... 256 2e-67 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 256 3e-67 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 256 3e-67 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 256 3e-67 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 256 4e-67 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 256 5e-67 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 255 6e-67 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 255 8e-67 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 255 9e-67 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 255 9e-67 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 255 9e-67 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 255 1e-66 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 255 1e-66 UniRef50_A8LHM9 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 255 1e-66 UniRef50_C1TRD8 Response regulator containing a CheY-like receiv... 255 1e-66 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 254 1e-66 UniRef50_C4DM40 Response regulator containing a CheY-like receiv... 254 1e-66 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 254 1e-66 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 254 1e-66 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C6XAG0 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 254 2e-66 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 254 2e-66 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 254 2e-66 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 253 2e-66 UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=... 253 2e-66 UniRef50_D1BTX1 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 253 2e-66 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 253 3e-66 UniRef50_D2PS71 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacilla... 253 3e-66 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 253 3e-66 UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms Rep... 253 3e-66 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 253 4e-66 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 253 4e-66 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 253 4e-66 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 253 4e-66 UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=... 252 5e-66 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 252 5e-66 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 252 6e-66 UniRef50_C8VWU8 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_D1V9H6 Two component transcriptional regulator, LuxR fa... 252 6e-66 UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=... 252 6e-66 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 252 6e-66 UniRef50_C5D120 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 252 7e-66 UniRef50_A5CSF7 Putative two-component system, response regulato... 252 7e-66 Sequences not found previously or not previously below threshold: >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 312 bits (802), Expect = 4e-84, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 134/216 (62%), Gaps = 1/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M++ E TIL+ DDH ++R G+++++ + PD+ VVGEA+ G++ IE+ P +I++D+ Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIEMTRRYQPQVIIMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPG+NG+E +R++ I+ ++ + EE ++ L+ G GY+LKD+ E+L++A+ Sbjct: 61 NMPGLNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVN-QLTPRERDILKLIAQGLPNKMIARR 179 +Q A G V+ + + ++ + T V+ LT RER+IL ++ G N+ IAR Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L I+E TVK H+ H+ K+ + R +AA++ + + Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 307 bits (789), Expect = 2e-82, Method: Composition-based stats. Identities = 76/225 (33%), Positives = 122/225 (54%), Gaps = 11/225 (4%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 I+LIDDH + R G+K+++ D VV E S+G++ + L E PD++++D+NM Sbjct: 33 TTMKTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEALALVERYKPDVVIMDINM 92 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG+E +L E ++++ S+ + E V+ AL+ GA GYLLK+M+ + L++A+ Sbjct: 93 PHVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVRV 152 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTE-----------RDVNQLTPRERDILKLIAQGL 171 A G L +T L R A R + LT RE ++L+L+A G Sbjct: 153 VAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADGK 212 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 NK IA L I+E TVK HV ++L+K+ + R +A V + Sbjct: 213 SNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWV 257 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 305 bits (783), Expect = 6e-82, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 128/215 (59%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +L+ +DH ++R G+ L+ PDI VVGEA NG + I++ E L PD++L+D++MP Sbjct: 2 NKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREAIKMVEELAPDVVLMDISMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NG++ +L++K +I++ S+ + EE + L+ GA GYL+K P DL+KA+H A Sbjct: 62 LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKAIHAAH 121 Query: 125 AGEMVLSEALTPVLAASLRANRAT---TERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG+ LS +++ + + + R ++ L+ RER++L+LIA+G N+ IA L Sbjct: 122 AGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIAGHLY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H H+ KK+ L E + ++ + Sbjct: 182 ISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLV 216 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 299 bits (767), Expect = 4e-80, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 127/215 (59%), Gaps = 1/215 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ P T+LL+DDHP++R G ++L+ D+ VVGEA +GE+ I A L PD+IL+D++ Sbjct: 10 AHTRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKARQLMPDVILMDVS 69 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPGMNG+E ++ + I+V + + + V L+ GA GYLLK+ ++LL A+ Sbjct: 70 MPGMNGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVR 129 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAGE L A+ + + T + L+PRE ++L++ A G NK IAR LD Sbjct: 130 AVAAGESALHPAVARKVLERF-STHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+VH+ ++ K+ + SR EA ++ + Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWI 223 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 299 bits (767), Expect = 5e-80, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 129/216 (59%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N +L++DDH + R G++QLI P I VVGEA+NG+ +++ L PD++L+D+ Sbjct: 22 MGNGRRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDALKMVAELQPDVVLMDI 81 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGM+G+ + + ++ +++ ++ + EE V+ A++ GA YL+K+ +PE+LL+A+ Sbjct: 82 NMPGMDGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 H AA G + L P+L + L+ RE +L+L+AQG N+ IA L Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ ESTVK ++ + +K+ ++ R +A ++ + Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLV 237 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 297 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 126/213 (59%), Gaps = 2/213 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +L+ DDH ++R G+KQ+I + PDI V+G A++GE+ + + L PD++LLD++MP Sbjct: 9 KKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKTQQLSPDVVLLDISMPK 68 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 NG++TL +L++ + +I++ + E + + GA+GY+LKD E E L+KA+ Sbjct: 69 QNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGANGYVLKDAESESLIKAIRDVY 128 Query: 125 AGEMVLSEALTPVLAASLRANR--ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G + L L + + ++LT RE ++L L+A+G+ NK I L I Sbjct: 129 QGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGDCLFI 188 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E TVK HV ++ KK+ + R +AA++ ++ I Sbjct: 189 SEKTVKNHVSNIFKKINVNDRTQAAIYAYKHNI 221 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 297 bits (763), Expect = 1e-79, Method: Composition-based stats. Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 9/221 (4%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P IL++DDHP+ R+G++ + P +VGEA++G + + LA+ L PD+IL+DL++PG Sbjct: 2 SPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADELSPDVILVDLSLPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 MNGLE L+ + +++ ++ +E + A++ GA Y KD+EPE L+ + + A Sbjct: 62 MNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRVA 121 Query: 125 AGEMVLS------EALTPVLAASLR---ANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 GE +++ + + R T+ + LTPRE +IL +A+G NK Sbjct: 122 RGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNKE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA+ L+I++ TVK H+ +L+K+ + R +A ++ + Sbjct: 182 IAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWI 222 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 297 bits (761), Expect = 3e-79, Method: Composition-based stats. Identities = 74/216 (34%), Positives = 135/216 (62%), Gaps = 4/216 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH + R G++ ++ PDI +V EAS+G + + A PD++LLD+ MP Sbjct: 85 DPIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLPDVVLLDVRMPK 144 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+E ++E S +I++ ++S+ E D+ A+K GA GYLLK++ +++ A+ Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAMGYLLKEISIDEVAAAIRAVH 204 Query: 125 AGEMVLSEALTPVLAASL----RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ ++S ++ L + A + +LT RE ++L+L+A+GL N+ IA++L Sbjct: 205 GGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQL 264 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK HV+++L+K++L SR+EA V+ +E++ Sbjct: 265 FISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLL 300 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 293 bits (753), Expect = 2e-78, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 125/219 (57%), Gaps = 4/219 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P ++L DD ++R G + ++S I VVGEA +G + +E+A D++L+D+ Sbjct: 16 TGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVATRERADVVLMDVQ 75 Query: 62 MPGMNGLETLDKLR---EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 MP ++GLE +L ++++ + + E+ + AL+ GA G+LLK+ PEDL++ Sbjct: 76 MPKLDGLEATRRLLGPAGADHPTKVIILTTFDREDYLFEALRAGASGFLLKNASPEDLIE 135 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANR-ATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 ++ A G+ +LS +T + A A R ++LT RE ++L L+A+G N IA Sbjct: 136 SVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAEIA 195 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R+L + E+TVK HV +L K+ L+ R A V+ ++ I Sbjct: 196 RQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIV 234 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 292 bits (750), Expect = 4e-78, Method: Composition-based stats. Identities = 76/211 (36%), Positives = 119/211 (56%), Gaps = 2/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 EP +LL+DDHP+LR G++ L+ VVGEA +GE+ I L SL+PD++++DL MPG Sbjct: 17 EPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEAIALVLSLNPDVVVMDLVMPG 76 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 + G+E L ++ ++V ++S + V AL+ GA GY+LK + D + A+ A Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE V A+ + L +LT RER+IL L+A G N IARRL +++ Sbjct: 137 RGEAVYGPAVARRIRRFLTTG--PESGPFPELTQREREILDLLASGKSNAEIARRLFLSQ 194 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK H+ + K+++ R +A V + + Sbjct: 195 KTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 292 bits (750), Expect = 5e-78, Method: Composition-based stats. Identities = 75/223 (33%), Positives = 129/223 (57%), Gaps = 7/223 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + ILL DDH + R G+K+++ M D+ V GEA NGE+ ++ + L P++IL+D+ Sbjct: 4 MDENKTIRILLADDHALFRQGLKKILDMEEDLAVCGEAQNGEEVVDKVKLLKPNIILMDI 63 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP +NG+E ++E S +++ ++ EE + +K GA G+LLKD+E L++A+ Sbjct: 64 NMPLLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDV-------NQLTPRERDILKLIAQGLPN 173 + G + +T L + R++ ++LT RE++IL+L+AQG N Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K I++ L I+E TVK HV ++L+KM + R +A + + + Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITALKCGVV 226 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 292 bits (749), Expect = 5e-78, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 132/218 (60%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ +L+ DDH ++R G+++++S+ P I+VVGE +NG+Q ++ D++L+D+ Sbjct: 1 MNTS--IKLLIADDHILIREGLRKILSIEPHISVVGEVTNGQQAVDYCLKNPVDIVLMDI 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP MNG+E ++++ + + I+ ++ + +E + +K G GY+LKD+ P+ L+K + Sbjct: 59 NMPIMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFELIKYGISGYVLKDIHPDQLIKTI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRAT--TERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A GE + +LT + A + +E+ LT RE ++LK +A+G NK IA Sbjct: 119 LGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIAN 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+E TVK H+ ++ +K+ + R +AA++ +E++ Sbjct: 179 ALYISEKTVKNHLTNIFQKIGVADRTQAALYAIKEKLV 216 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 291 bits (747), Expect = 9e-78, Method: Composition-based stats. Identities = 64/216 (29%), Positives = 120/216 (55%), Gaps = 3/216 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 P +++++D ++R G++ L+ + + VVGEA++G + +E P+++L+D+ MP Sbjct: 2 SGPVRVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLVDVRMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+G++ +++L + ++ + + +E V L+ GA GY+LKD E+L A+ + Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGARGYILKDTPSEELAAAIEKV 121 Query: 124 AAGEMVLSEALTPVL---AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 GE VL +T + L A + L+ RE ++L+L+A G N+ IAR L Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ITE TVK H+ +L+K+ + R +AA++ + Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYALERGWI 217 >UniRef50_A0K2I9 Two component transcriptional regulator, LuxR family n=5 Tax=Actinomycetales RepID=A0K2I9_ARTS2 Length = 250 Score = 290 bits (745), Expect = 2e-77, Method: Composition-based stats. Identities = 69/243 (28%), Positives = 127/243 (52%), Gaps = 27/243 (11%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ P +LL+DD P+LR G + ++ D+ +VGEAS+G + I +DPD++L+D+ Sbjct: 1 MNGNTPIKVLLVDDQPLLRMGFRLILEGEDDLRIVGEASDGAEAIRQVREVDPDVVLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+E + ++++ + + +E L+ GA +LLKD+ P +L+ A+ Sbjct: 61 RMPVLDGIEATRAVTSSGSHAKVIILTTFDLDEYAFAGLQAGASAFLLKDVAPSELVSAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATT---------------------------ERDV 153 A+G+ V++ +T L + + + Sbjct: 121 RVVASGDAVVAPRVTRRLLEAYVREGNPPAVNGQRAGTSAPAAGRGRHSLGEEQQRDPLL 180 Query: 154 NQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 LTPRE ++L+ +A+GL N IA R ++E+TVK HV+ +L K+ L+ RV+A V+ ++ Sbjct: 181 EALTPREMEMLEAMAEGLSNAEIAHRFFLSEATVKTHVRRILAKLHLRDRVQAVVYAYET 240 Query: 214 RIF 216 + Sbjct: 241 GLV 243 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 290 bits (744), Expect = 2e-77, Method: Composition-based stats. Identities = 77/214 (35%), Positives = 126/214 (58%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + P +L++DDHP++R G++ + VVGEAS+G Q + A PD++L+DL M Sbjct: 8 DSSPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGPDVVLMDLRM 67 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M G+E + +LR + + R++V + + E DV+ A++ GA GYLLKD EDL++A+ Sbjct: 68 PTMGGVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGATGYLLKDAPREDLIRAVRA 127 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AAAG+ VL+ + L ++ A + LT RE ++L+L+A G N+ AR+L I Sbjct: 128 AAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFI 187 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +E+TVK H+ H K ++ R A ++ + Sbjct: 188 SEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLL 221 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 289 bits (741), Expect = 6e-77, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 132/213 (61%), Gaps = 1/213 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ IL++DDH LR ++ ++ D+ VVGEAS+G+ +E E+ PD IL+D+N+P Sbjct: 2 RKMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEACRPDCILMDINLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G NG+E + +++ + R++VF++ H+E ++ AL+ GADGYLLKD E ++ A+ Sbjct: 62 GKNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGADGYLLKDSSSEQVVAAIRML 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G+ V+ +T L + E + N+LT RE++IL + +GL NK IA L I+ Sbjct: 122 YRGDSVIHPRMTKKLIT-YHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALYIS 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TVK+H+ + KK+ +KSR +A ++ + ++ Sbjct: 181 DKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLV 213 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 288 bits (740), Expect = 6e-77, Method: Composition-based stats. Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 4/212 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 P +L++DD ++R G+K ++ PD+ VVG+A NG+ +EL L PD++L+D+ M Sbjct: 5 KSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDAENGKVALELVAELQPDVVLMDIRM 64 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M+G + + + +++V S + + + A++ GA GYLLKDM +L A+ Sbjct: 65 PEMDGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGAKGYLLKDMPSSELADAIRF 124 Query: 123 AAAGEMVLSEALTPVLA----ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 +G L L AS AN+ + +++T RE+++L LI G N+ IA+ Sbjct: 125 GHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREIAQ 184 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 +L ITE TVK HV +L ++ LK+R + A++ Sbjct: 185 QLYITEGTVKTHVTSILSRLNLKNRSQLAIYA 216 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 288 bits (739), Expect = 7e-77, Method: Composition-based stats. Identities = 77/228 (33%), Positives = 126/228 (55%), Gaps = 14/228 (6%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N+ I++IDDH + R GVK++++M P+ VV + +GE +EL E +PD+IL+D+NM Sbjct: 6 NENKIQIVIIDDHQLFREGVKRILAMEPEFEVVADGEDGENAVELVEKYNPDVILMDINM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG+E L ++ +++V S+ + E V LK GA GYLLK+M+ + L++A+ Sbjct: 66 PKVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGASGYLLKEMDADALIEAVKV 125 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQ--------------LTPRERDILKLIA 168 A G + +T L R E++ ++ LT RE ++L+L+ Sbjct: 126 VAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQLMT 185 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 G N+MI L I+E TVK HV ++L+KM + R +A V + Sbjct: 186 DGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAVVESIKNGWV 233 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 288 bits (739), Expect = 8e-77, Method: Composition-based stats. Identities = 85/217 (39%), Positives = 133/217 (61%), Gaps = 3/217 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ +L++DDH + R GV ++ P I VVGEA NG + IE ++L PD+ LLD++ Sbjct: 5 QDESVIKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREAIECFQTLQPDVTLLDIH 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP NGLET K+RE + + +I++ +VS EE + A+K GA GY+LK + PE L++ + Sbjct: 65 MPVCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGASGYVLKSVSPERLIECVR 124 Query: 122 QAAAGEMVLSEALTPVLAASLRA---NRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 Q GE V+ +L + A R + V +LT RER++L+ ++ G NK IAR Sbjct: 125 QVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIAR 184 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L I+E+TV+ HV+H+L K+ L +R +AA + + I Sbjct: 185 ALFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGI 221 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 288 bits (739), Expect = 9e-77, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 122/209 (58%), Gaps = 3/209 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +LL++DH ++R G+ + + +VGEA NGE + + PD++L+DL+MP M Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEAENGEDALTFVRTERPDVVLMDLSMPKM 73 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++++ + +I++ S + ++ V+ AL+ GADGY LK+++PE L+ ++ Sbjct: 74 DGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGADGYQLKEVQPEQLVASIIAIYE 133 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G +TP L + E + LT RE+++L+ IA+G NK IA L ITE Sbjct: 134 GNANFHPKVTPALLGR---SAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHITEQ 190 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK HV ++L K+++ R +AA++ + Sbjct: 191 TVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 287 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 75/221 (33%), Positives = 121/221 (54%), Gaps = 6/221 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 P +L+ DD ++R G + L+ PD+TVV EA++G + + L PD++L+D+ Sbjct: 21 PPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRESRRLRPDVVLMDIR 80 Query: 62 MPGMNGLETLDKLREKS--LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MP MNGLE + + I+V + + +E V AL+ GA G++LKD +PE+LL A Sbjct: 81 MPVMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQPENLLAA 140 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRATTERDV----NQLTPRERDILKLIAQGLPNKM 175 + AAG+ +L+ +T L A+ A + + LT RER +L IA G N Sbjct: 141 IRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIANGYSNAE 200 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA+ L ++ STVK HV H+L K+ + R + + ++ + Sbjct: 201 IAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLV 241 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 81/213 (38%), Positives = 127/213 (59%), Gaps = 2/213 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +LL+DDH ++R G++ + + DI VVGEAS+GE+GI AE L PD+IL+D+ M Sbjct: 4 TPGRVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARAEELRPDVILMDIKM 63 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 PG +G+E L +LRE + R+++ + + VV AL+ GA GY+ KD++P+ L A+ Sbjct: 64 PGTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRS 123 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AG ++L + L ++ + LT RER++L IA G N+ IAR L + Sbjct: 124 VHAGHVLLQPEVAVALLTQ--DDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E TVK HV ++L K+ + R +AA+W + I Sbjct: 182 SEKTVKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 286 bits (734), Expect = 3e-76, Method: Composition-based stats. Identities = 76/214 (35%), Positives = 127/214 (59%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ Q P +LL+DD ++R G+K + P+I +VGEA +G+ I A++L PD+IL+D+ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQAKTLQPDVILMDI 61 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP M+G+ ++ ++++ + + E +V A+++GA GYLLK+ PED ++++ Sbjct: 62 NMPQMDGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 QA G + L L L L+ +TPRE+D+LKL+A G N+ I+ L Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ITE TVK HV +L ++ ++SR + A+W + Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWANSAG 215 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 285 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 1/214 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 E +L+ DDHP+ R G++ L+ + VVGEA +G Q ++LA L PD++++DL+ Sbjct: 5 PGNEAIRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQAVQLAAELQPDVVVMDLH 63 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG NG+E + S ++V ++ ++ V A++ GA GYLLK+ E++ +A+ Sbjct: 64 MPGGNGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVR 123 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAGE + + + + +LT RER++L+LIAQG N IA+ L Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++ TV+ HV ++ K+ + R +A V + + Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 285 bits (732), Expect = 6e-76, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 134/213 (62%), Gaps = 1/213 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + +LL+DDH ++R GV+ + DI VVGEA+NG++ +E+ L PD+IL+D+ MP Sbjct: 2 SDVIKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEAVEMTAELSPDIILMDMLMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+G++ + ++R++ L GRI+ + ++ + A+K GA GYLLKD P++LL+A+ + Sbjct: 62 VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAMGYLLKDSTPDELLEAIRRV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE L+ + + + L +E + LTPRE D LKL+A+G NK IA + + Sbjct: 122 HRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEMFV 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E+TV+ H+ +L K+ L +RVEA ++ +E I Sbjct: 182 SEATVRTHMTSILSKLHLANRVEATLYALREGI 214 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 285 bits (731), Expect = 6e-76, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 120/218 (55%), Gaps = 3/218 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 +L++DD P++R G+ ++S P VVGEA NG Q + LA L PD++++D+ Sbjct: 6 PTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQAVTLARRLRPDVVVMDIR 65 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP ++G+ +L R++ S + +E VV AL+ GA G+L KD PEDL A+ Sbjct: 66 MPVLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAYGFLPKDSSPEDLSAAIR 125 Query: 122 QAAAGEMVLSEALTPVLAASLRANR---ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AGE ++ L L ++ T + +LTPRE ++ +L+A GL N I+R Sbjct: 126 TVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGISR 185 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 LDI+ STVK ++ + K+ ++ R +A + ++ + Sbjct: 186 TLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 285 bits (730), Expect = 8e-76, Method: Composition-based stats. Identities = 77/208 (37%), Positives = 123/208 (59%), Gaps = 1/208 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I++ DDH ++R G++ + DI VVGEA+ G + + + E PDL+L+DL+MP M+G Sbjct: 2 KIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALRVIEETKPDLVLMDLSMPEMDG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + K ++ I+V + + +E V+ AL+ GA Y LKD EPE+L+K Q GE Sbjct: 62 IQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT-RQVHGGE 120 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 LS A+ P + ++ + QLT RE+D+L IA G NK IA L I+E TV Sbjct: 121 YKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISEKTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 K HV ++L K+++ R +AA++ + + Sbjct: 181 KTHVSNLLAKLEVADRTQAALFAVKYNL 208 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 285 bits (730), Expect = 1e-75, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 120/211 (56%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++LL+DDH + R ++ L+ PDI V+GEA +G +LAE PD+IL+D++MPG++ Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSAQQLAERFHPDVILMDISMPGVD 82 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ L+ + +I++ ++ + V+ A++ GAD YLLK+ E ++ A+ A G Sbjct: 83 GVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGADAYLLKNSESSKVIDAIRAVARG 142 Query: 127 EMVLSEALTPVLAASLRA-NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E V+ L L R + E V LT RE +L+L+A G+ NK IA L + ES Sbjct: 143 ESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAELSLAES 202 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK + + +K+ +K R +AA++ + Sbjct: 203 TVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++ + L DD P++R G + +I+ D+TV GEA +G I LA+ PD+IL+D+ M Sbjct: 2 NKDKIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDGHDIIALAKQTKPDVILMDVQM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +G+E + + +IV+ + + EE V ++ GA GYLLKD PE+L+ A+ Sbjct: 62 PRCSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAVGYLLKDTLPEELIDAIRA 121 Query: 123 AAAGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AA GE + + + + E T RE ++L+ +A GL N+ IA +L Sbjct: 122 AARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAEKL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ESTVK HV +L+K + R +A V+ + I Sbjct: 182 FVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 1/215 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + +IL+++D ++R G++ ++ + I VVGEA +G +G+ A L PD+IL+D+ Sbjct: 1 MQQSD-ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREALRLRPDIILMDV 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP MNG+E + + RI+V + + ++ V +++ GA GYLLKD E LL+ + Sbjct: 60 QMPVMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAMGYLLKDAPAEALLQTI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + AGE+ + + R L+ RER++L L+AQGL N+ IA RL Sbjct: 120 RRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRL 179 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ITE TVK HV ++L K++ ++R +AA +E + Sbjct: 180 SITEGTVKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 284 bits (729), Expect = 1e-75, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 118/210 (56%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LLIDDH M+R G+ + PDI V+GEAS+G +G+ LA L PD+IL+DL M GM+ Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVELSPDVILMDLVMEGMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ + +I+V + ++ V ++ GA YLLK + ++ A+ A+ G Sbjct: 62 GIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALSYLLKTSKAAEIADAIRAASKG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E L + + + LR + LT RE +IL LIA+G NK I L IT T Sbjct: 122 EPKLESKVAGKVLSRLRHSGENA-LPHESLTKRELEILCLIAEGKTNKEIGEELFITIKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ ++L K+ + R +AAV+ H+ + Sbjct: 181 VKTHITNILSKLDVSDRTQAAVYAHRNHLV 210 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 284 bits (728), Expect = 2e-75, Method: Composition-based stats. Identities = 65/222 (29%), Positives = 116/222 (52%), Gaps = 8/222 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+++ I+L DD + G+K L+S+ + +VGE NG++ +E L P ++L+DL Sbjct: 1 MTDR--IQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEALEACRRLRPQIVLMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP M+G+ ++++ ++ + + +E V ALK G+ GYLLKD + L++A+ Sbjct: 59 NMPVMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTE------RDVNQLTPRERDILKLIAQGLPNK 174 ++GE L ++ + A + L+ RE +L +++G NK Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA LD+ E TVK HV ++L K+ + R +AA+ + Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 283 bits (727), Expect = 2e-75, Method: Composition-based stats. Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 9/215 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 ++ IL++DDH ++R G+ L++ P V+ EA +G + I L PD+ ++DL Sbjct: 5 THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREHQPDITIMDLR 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 +P MNG+E + ++RE+S RIVV + + +ED+ AL+ GA GYLLK M+ +DL A+ Sbjct: 65 LPRMNGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGARGYLLKGMDADDLTAAIR 124 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG+ + + LA + ++LT RE D+L+LI QG N+ IA L Sbjct: 125 SVHAGKSRIPTVVAERLAERMSG---------SELTARELDVLRLIVQGRSNREIAADLH 175 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK H+ ++L K+ + R +AA Q + Sbjct: 176 ISEATVKTHINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 283 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 1/207 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DD + R G+ L+ + D++VVG+A +G I L ++L PD+IL+D+ MP + Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAILLTQTLQPDVILMDVRMPICD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ ++ RI+V + + +E + T+L+ GA GYLLK L A+ G Sbjct: 62 GVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGALGYLLKSTPASQLAAAIRMLHDG 121 Query: 127 EMVLSEALTPVLAASLRANR-ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 L + P + A LR + + +L+ RE D+L LI QG N+ I++ L +TE Sbjct: 122 HFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQILHLTEG 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 TVK +V +L + ++ R +AA+W Q Sbjct: 182 TVKNYVSQLLGSLGVRDRTQAALWAQQ 208 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 283 bits (725), Expect = 3e-75, Method: Composition-based stats. Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS +L+ DDH + R G+ +I+ P++ VV +A NGEQ I L E PD+ L+DL Sbjct: 1 MSQAITIRVLIADDHAIFRQGLATIINRDPEMQVVAQAENGEQVIALFEEHQPDVTLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP + G+ + + + S RI+V + + +ED+ L+ GA GYLLK+ EP++LL A+ Sbjct: 61 RMPEVEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G + + L L +L+ RE ++L+ +AQG+ N IA L Sbjct: 121 RTVHRGHKYIPPDVGAKLVQRLSNP---------ELSERELEVLRSLAQGMSNADIADAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I E TVK HV +L K+ + R +A + + I Sbjct: 172 SIGEGTVKSHVNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 75/214 (35%), Positives = 128/214 (59%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+++DD ++R+G+ ++ DI VV E +NG + IE A+ PDLIL+D+ MP M+ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYIPDLILMDIRMPEMD 62 Query: 67 GLETLDKLR-EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GL + + ++ RIV+ S + +E + AL+ GA G++LKD P++L+ A+H A Sbjct: 63 GLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGASGFILKDTPPDELVAAVHVVAQ 122 Query: 126 GEMVLSEALTPVLAASLRANRATTER---DVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G +L+ ++T L + + + +++LT RE++ILK +A G N IA RL I Sbjct: 123 GGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIASRLFI 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ESTVK HV +L K++L+ R +A ++ ++ + Sbjct: 183 GESTVKTHVSSLLSKLELRDRAQAVIFAYENGVI 216 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 281 bits (721), Expect = 1e-74, Method: Composition-based stats. Identities = 72/212 (33%), Positives = 130/212 (61%), Gaps = 5/212 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +P +L+ DDH ++R G+ +L+ + DI VVGEA +G + ++ PDL+LLDLNMP Sbjct: 2 KPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHFPDLVLLDLNMPR 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M G+ + K++E S ++++ ++ + EE V ++ GA+GY+ KD++PE+L +A+ + Sbjct: 62 MGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQKDVKPEELKRAIDKVI 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ V T + + +V +L+ RE+++L+L+AQG+ NK IA+ L I+E Sbjct: 122 KGDKVF-PRSTENEVREVVNEKY----EVCELSSREQEVLELLAQGMSNKQIAQELFISE 176 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV ++L+K+ + R +A + + + Sbjct: 177 KTVKNHVSNILRKLSVNDRTQAVIVALKRGLV 208 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 6/212 (2%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 ++ DD ++R G+ L+ + P I VVG A +G++ + L PD++L+DL MP +G+E Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEAVALVAEKAPDVVLMDLRMPRCDGVE 61 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++R++ ++VV + ++ + TAL+ GA GYL KD E++++A+ +GE Sbjct: 62 ATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGARGYLTKDARGEEIVQAIDAVMSGEAG 121 Query: 130 LSEALTPVLAASLRANRATTER------DVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 LS + L + + + LTPRE ++L LIA+GL N+ IAR L ++ Sbjct: 122 LSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARALHVS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TVK H+ ++ K + R +A + + + Sbjct: 182 AATVKTHINNLFAKTGARDRTQAVRYAYGRGL 213 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 280 bits (718), Expect = 2e-74, Method: Composition-based stats. Identities = 75/218 (34%), Positives = 115/218 (52%), Gaps = 5/218 (2%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES-----LDPDLILL 58 ILL DDH ++R GV+ ++ PD+ VVGEA +G + IE + DL +L Sbjct: 25 PAKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M GL+ +L RI++ ++ ++E+ + ALK GA GY+LK + DL++ Sbjct: 85 DVAMPRMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A A GE L VL S E LTPRE +ILKL+A+G ++ IA Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ TV+ H ++L K+ +K R+E + + + Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLI 242 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS P ILL DDH M R G+++L+ +VGEAS G + + A +L PD++LLD+ Sbjct: 1 MSTM-PIRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAALRPDIVLLDI 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G+ +L + ++++ ++ ++ + A+K GA YLLKD + ++L+ + Sbjct: 60 QMPEIDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARAYLLKDADADELIDVI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + GE L +T + R R + ++D QLT RERDIL L+A+G N+ IA+RL Sbjct: 120 ERVHRGEAALDPTVTLRVFDEFR--RLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRL 177 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++E TV + + +K+ + +R +AA+ Q + Sbjct: 178 FLSEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLI 213 >UniRef50_A9AX03 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AX03_HERA2 Length = 218 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 2/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R G+ ++++APD+ V+ ASNG + ++L+ + PDLIL+DL MP MN Sbjct: 2 IKLLICDDQAVVRDGLSIMLNLAPDLEVIAVASNGREAVQLSATWQPDLILMDLKMPIMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ +I+V + + +E + A++ GA GYLLKDM DL+ A+ +G Sbjct: 62 GIEATRQISAAQPLVKILVLTTYDDDEWLFEAIRAGAAGYLLKDMAHSDLVSAIRGTVSG 121 Query: 127 EMVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + + +T L + + N+ + +LT RE +L LIA G N IA +L ++E Sbjct: 122 KAYVDPNVTARLLSQVATSRNQPPASQLTGRLTERELAVLNLIATGHTNASIAEQLRLSE 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ HV +L K+ + R +AA+ + + Sbjct: 182 GTVRNHVSTILSKLDVADRTQAALLAVEHGL 212 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 115/215 (53%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 ILL DDH + R GV+ L++ D+ V GEA+N + LA+ L PD++L+D+ M G Sbjct: 2 SKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALAQQLRPDVVLMDIGMAG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+ E +R++ +++ S+ + E+ + + GA+GY+LKD + L+ A+ + Sbjct: 62 MSSFEATRLIRKERPEVKVIFLSMYDDEDYLAECVDMGANGYILKDSPADQLITAIREVQ 121 Query: 125 AGEMVLSEALTPVLAASLR---ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 G LS L L R T LT RER+ILK++A+G K IA + Sbjct: 122 RGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAAFFE 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ H ++++K+ + ++ + + Q++I Sbjct: 182 LSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKII 216 >UniRef50_C0WKL5 Response regulator n=6 Tax=Corynebacterium RepID=C0WKL5_9CORY Length = 253 Score = 280 bits (717), Expect = 3e-74, Method: Composition-based stats. Identities = 77/242 (31%), Positives = 127/242 (52%), Gaps = 26/242 (10%) Query: 1 MSN----QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLI 56 MSN EP I L+DD P+LR G LI D++VV +AS+G++ ++LA D+I Sbjct: 1 MSNPEQESEPIRIALVDDQPLLRAGFAMLIGSQEDMSVVWQASDGDEVLDLARQEPVDII 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+D+ M +NG+ +++ + ++++ + + V A+ GA G+LLKD+EPE+L Sbjct: 61 LMDVQMARVNGIAATEEVLPEFPDTKVIMLTTFDDHNFVHGAISAGASGFLLKDVEPEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANR----------------------ATTERDVN 154 L A+ +GE VLS +T + +R+ T Sbjct: 121 LSAIRTVHSGEAVLSPRITAQVLQQVRSEEGGDSRKAHSASHTAAAAQPGATTATAPPSA 180 Query: 155 QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +LTPRE DIL+L+A G N I+ ++ +TVK HV+H+L K + RV+A ++ + Sbjct: 181 ELTPREMDILRLMALGYSNTEISEEEFVSMATVKTHVRHVLTKTGSRDRVQAVLYAYTHG 240 Query: 215 IF 216 + Sbjct: 241 VV 242 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 279 bits (716), Expect = 4e-74, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 128/212 (60%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++LL+DDH + R G+ L+S PD TVVGEA++GE+ +E A L PD++L+D+++PG++ Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERARELVPDVVLMDIDLPGID 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +++ + R+V+ +V + E + ++K GA GYL+K++ +LL L A G Sbjct: 64 GIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQLRGLARG 123 Query: 127 EMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 E +S + + E L+PRE ++L+L+A L NK IA RL I+E Sbjct: 124 EAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAARLSISE 183 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+K++L K++L SR +AA + + Sbjct: 184 HTVKNHLKNILAKLQLSSRRQAAAYAVAHGLI 215 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 70/214 (32%), Positives = 119/214 (55%), Gaps = 2/214 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + ILL DDH ++R G++ L+ P V+G+A++G + LA PD++++D+ MPG Sbjct: 2 KTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTPDVVVMDVAMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NG+E ++ K IV S+ + E V+ ALK GA YLLKD DL+ A+ + Sbjct: 62 LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVS 121 Query: 125 AGEMVLSEALTPVLAASLRANRATT--ERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G+ S A++ +L E LT RER++L+L+A+G NK +A L++ Sbjct: 122 EGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H ++L+K+ L S E ++ ++ + Sbjct: 182 SLYTVETHRGNILQKLNLHSGAELILYAIRKGVI 215 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 68/215 (31%), Positives = 114/215 (53%), Gaps = 6/215 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GMN 66 I++ DDH ++RTG +++ D+ VV A++G + + PD+++LDL+MP G + Sbjct: 2 KIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGES 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL K+ E +I++ ++ + EE + LK GA GY+LK+ E L+ A+ G Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVRTVYQG 121 Query: 127 EMVLSEALTPVLAASLRANRATTE-----RDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 E + LT L T E L+ RE +IL LIA+G NK IA +L Sbjct: 122 ETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ H H++ K+ LKS+ E + ++++ Sbjct: 182 VSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLL 216 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 278 bits (712), Expect = 1e-73, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 125/213 (58%), Gaps = 8/213 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 ILL DDH ++ G+ ++M PD +VGEA NG++ +E A L PD++L+DLNMP M Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKAGELQPDIVLMDLNMPIM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++E+ +++V + + +V AL+ GA GY+LKD+EP+ L +A+ A Sbjct: 62 DGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAIGYMLKDVEPDQLAEAIRSAYK 121 Query: 126 GEMVLSEALTPVLAASLRA--------NRATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 G + L ++ L + + ++ + LTPRE ++L+L+ +GL NK IA Sbjct: 122 GNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLSNKDIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 + L + E TVK HV +L K+ L R +AA++ Sbjct: 182 QTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 7/215 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +L++DD ++RTG+ L+S DI VVG+A NG + +EL SLDPD++L+D+ MP M Sbjct: 2 TIRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREALELVASLDPDVVLMDVMMPVM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E KL E+ +++ + + +E V+ ++ GA GYLLKD++ L ++ A Sbjct: 62 DGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGARGYLLKDVDHRVLADSIRTVAG 121 Query: 126 GEMVLSEALTPVLAASLRANRAT-------TERDVNQLTPRERDILKLIAQGLPNKMIAR 178 G ++ + L L + T + LTPRERDIL+L+AQG N+ I Sbjct: 122 GGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQEIGE 181 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 +L ++ TVK H+ + K+ ++ R +AA+W + Sbjct: 182 QLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREH 216 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 76/209 (36%), Positives = 131/209 (62%), Gaps = 2/209 (0%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 L++DD + R G+ L+ I VVGEA +G +G LA + PD++LLD+ MP +G+E Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLAATAAPDVVLLDIRMPKRSGIE 61 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++E S +I++ +VS+ E D+ A+K GA GYLLKD E++ +A+ A G+ + Sbjct: 62 ACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVADGQSL 121 Query: 130 LSEALTPVLAASLRANRATTERDVN--QLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +S ++ L + V +LT RE ++L+L+A+G+ N+ IA+ L I+E+TV Sbjct: 122 ISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFISENTV 181 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV+++L+K++L SR+EA ++ +E++ Sbjct: 182 KNHVRNILEKLQLHSRMEAVMYAVKEKLL 210 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 73/219 (33%), Positives = 120/219 (54%), Gaps = 6/219 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELA----ESLDPDLIL 57 ++++DDH M+R G+K + P V+ EA +G + +EL PD+IL Sbjct: 8 PRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIIL 67 Query: 58 LDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLL 117 +DL MPGMNG E ++R + +IV+ + ++ VV A++ GA Y+LK + E+L+ Sbjct: 68 MDLMMPGMNGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSAEELI 127 Query: 118 KALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 AL A G V++ + L LR + + +T RE+++L LIA+G NK IA Sbjct: 128 YALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDD--SGMTEREKEVLLLIAEGKSNKDIA 185 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ TVK HV ++L K +L+ R + A++ H++ Sbjct: 186 EELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWV 224 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 277 bits (711), Expect = 1e-73, Method: Composition-based stats. Identities = 72/216 (33%), Positives = 112/216 (51%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ILL DDHP+L + + D+TV+G A +G + +EL PD+ L+DL Sbjct: 3 MSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREALELFHQHQPDVALMDL 62 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M G + + + K RIVV + + +ED+ L+ GA GYLLK EP +LL A+ Sbjct: 63 RMPKMEGADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 G+ + + LA + + +L+ RE ++L+LIA+G N+ I+ L Sbjct: 123 RTVHKGQKYIPPTIAAKLAERMSS---------EELSDRELEVLRLIAKGKNNQQISNVL 173 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +I ESTV+ H ++ K+ + R +A V I Sbjct: 174 NIAESTVRFHTNNIFGKLNVSDRTQALVTALNRGIV 209 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 277 bits (710), Expect = 2e-73, Method: Composition-based stats. Identities = 78/216 (36%), Positives = 118/216 (54%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M +P IL++DDH ++R+G+ + + D+ VVGEA N + + PD++L+DL Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQFRKHHPDVVLMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +PG NG LR + R+++F+ + EED+ A++ GA GYLLK E+LL A+ Sbjct: 61 RLPGANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAGE LS AL LA + A + RER++L+LIA+G NK IA L Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDV---------SDREREVLQLIARGKANKEIAAAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E TVK H ++ KM + R +A + + Sbjct: 172 GISEETVKRHASNLFVKMGVADRAQATSEGIRRGLI 207 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 277 bits (709), Expect = 2e-73, Method: Composition-based stats. Identities = 85/210 (40%), Positives = 137/210 (65%), Gaps = 3/210 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DDH MLR GV ++S D+ V+GEASNG++ +EL L PDL+L+D+NMP ++G Sbjct: 2 KVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEALELVPKLKPDLVLMDINMPVLDG 60 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E KL++ ++V+ +VS ++D+ A+K GADGYLLK++ PE+L+ +L A +GE Sbjct: 61 VEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGADGYLLKNLGPEELVSSLRAAISGE 120 Query: 128 MVLSEALTPVLAASLRANRATTER--DVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 +S + + R RA T QL+PRE ++L+L + GL K IA +L + ES Sbjct: 121 APISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAKLYVAES 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK H++H+L+K+ L++R EA + + + Sbjct: 181 TVKNHMRHILEKLHLRNRSEAVGYAIRTGL 210 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 277 bits (709), Expect = 3e-73, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + +LL++DH ++R G+K L++ D+ VVGE ++G +E AE L PD++++D+NMP Sbjct: 2 TQTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGRAAVEAAERLAPDVVVMDINMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 ++G+ ++REK + R+++ S+ + EE V A++ GA GYLLK DL+ A+ + Sbjct: 62 KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGASGYLLKGSGLSDLVTAIREV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRA--TTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 A G S + +L R R+ + LT RER++L L+ +G + IA+ L Sbjct: 122 AGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILG 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ T++ H ++ K+ + + + + Sbjct: 182 LSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLV 216 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 112/210 (53%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L DDH +LR G+ L+S D TVV EASNG + +E A P + ++D++MP +N Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRPQVAVIDISMPELN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + ++ +K +I+V ++ +E V+ ++ GA GYLLKD E+L+ A+ A G Sbjct: 62 GMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALATG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + S+ VLA + LT RER++ L+ G K IAR LDI+ T Sbjct: 122 KTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISVKT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + H +L K+ + + E + + + Sbjct: 182 AENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 128/217 (58%), Gaps = 2/217 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + +LL DDH ++R G ++LI + VVGEAS+G + +E++ + PD++++D+ Sbjct: 1 MQTTQMIKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSMKVHPDVVVMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +NG+E ++++ + I++ + E+ ++ L+ GA +LLK+++ LL+A+ Sbjct: 61 AMPRLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AGE VL + T + L +A + VN LT RE ++LK+ A+G+ NK IA Sbjct: 121 RAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIAD 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +L ++ T++ H+ ++ KK+ + SR EA ++ + Sbjct: 181 QLYLSNRTIQTHLSNIFKKLSVGSRTEAILYGLKRGW 217 >UniRef50_C3BET8 Putative uncharacterized protein n=15 Tax=Bacillus RepID=C3BET8_9BACI Length = 216 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 132/212 (62%), Gaps = 6/212 (2%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +++DD ++R G+ L+++ ++ VVG A++G++ + +AE L P++IL+D+ MP +NG+E Sbjct: 1 MIVDDQSLIRDGLAMLLNLRSELEVVGTANDGDEVVRIAEQLQPEIILMDIRMPRINGVE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 +RE+ ++++ + N E + AL++GA GYLLKDME + +++A+ AG V Sbjct: 61 GTRLIRERFPDMKVLMLTTFNDSELIFEALEQGASGYLLKDMETDAIVQAILTVHAGGAV 120 Query: 130 LSEALTPVLAASLRANR------ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 L + +T + L+ + + V QLT RE D+L+ I GL NK IA +L IT Sbjct: 121 LPQDITAQIVKELKRTKVVEISGQNQPKQVEQLTEREIDVLREIGLGLNNKEIAEKLFIT 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV +++ K++L+ R +AA++ + I Sbjct: 181 EGTVKNHVSNLISKLELRDRTQAAIYAVRYGI 212 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 68/220 (30%), Positives = 125/220 (56%), Gaps = 5/220 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + E +L++DD ++R G K ++S + VVGEASNG + E + +L P ++L+D+ Sbjct: 38 NTSETVDVLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLALRPQVVLMDIR 97 Query: 62 MPGMNGLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MP +G+ K+ R++V + + +E V AL+ GA G++LKD EP+D+++A Sbjct: 98 MPVEDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGASGFMLKDAEPDDIVRA 157 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRA---TTERDVNQLTPRERDILKLIAQGLPNKMI 176 + AAG+ ++ ++T L + ++R + LT RER+IL+ +A+G+ N+ I Sbjct: 158 VRTVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEI 217 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 A L I+ +TVK H+ ++ K+ R + V ++ + Sbjct: 218 ADDLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLV 257 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 276 bits (708), Expect = 3e-73, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 120/210 (57%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL++DDHP++R G+ ++ D+TVVGEA +G+Q ++ L PD++L+DL MPG + Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQYRDLKPDVVLMDLAMPGTD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + +++ + R+VV + + +E ++ A++ GA GYLLK ED+ +A+ G Sbjct: 62 GVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGASGYLLKGAPREDIFRAVRVVYRG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +L + L + + E +LT RE D+L L+A+GL NK IA L ITE T Sbjct: 122 GSLLEPVVAGKLLNRM-GDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSITERT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H + +K+ + R EA Q + Sbjct: 181 VKFHANAIYRKLDVSGRTEAVSKAIQRGLV 210 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 276 bits (707), Expect = 4e-73, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GM 65 ++L+DDH ++R G++ L+ DI VVGE + + LAE P+++++DL + G Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALAEESRPEVVVMDLQLGAGR 62 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L EK ++V+ S+ + EE V AL+ GA GY+LK E+L A+ A Sbjct: 63 NGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVAR 122 Query: 126 GEMVLSEALTPVLAASLRANRA---TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE L + + L+ + + +LT RE ++L+L A+GL N IARRL I Sbjct: 123 GEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLVI 182 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H ++++K+ L RV+ + + I Sbjct: 183 SVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGIL 216 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 66/223 (29%), Positives = 112/223 (50%), Gaps = 13/223 (5%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I ++DDH + R G+K++ + + TVV E G + I +A P+++++D+NMP MN Sbjct: 6 TRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREAIRIAGEQKPEILIMDINMPDMN 65 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L S R+++ S+ + E + AL+ GA G+LLK++ +L+ A+ A Sbjct: 66 GIEATKQLSLLSPETRVLILSIHDDESYITHALEAGASGFLLKEVASTELISAVRAVAKD 125 Query: 127 EMVLSEALTPVLAASLRA-------------NRATTERDVNQLTPRERDILKLIAQGLPN 173 L +T + R T + L+ RE ++L L+A G N Sbjct: 126 GAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVLHLLADGRSN 185 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + I+ L I+E TVK HV +L+KM + R +A V + Sbjct: 186 RDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWV 228 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 275 bits (706), Expect = 6e-73, Method: Composition-based stats. Identities = 73/224 (32%), Positives = 123/224 (54%), Gaps = 11/224 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESL--DPDLILLDLN 61 P + L+DD M+R G + +I PD+TVV EA +G + + + +L D++L+D+ Sbjct: 7 SGPIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVR 66 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M+GL L + + R+VV + + +E V+ A++ GA G++LKD PE++L A+ Sbjct: 67 MPRMDGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGASGFMLKDAPPEEMLGAIR 126 Query: 122 QAAAGEMVLSEALTPVLAASLR---------ANRATTERDVNQLTPRERDILKLIAQGLP 172 AG+ V++ + T L L + + LT RER++L+L+A+G Sbjct: 127 TVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARGRS 186 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 N IA L + E+TVK HV +L K+ + RV+A V ++ + Sbjct: 187 NTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYETGVV 230 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 275 bits (705), Expect = 7e-73, Method: Composition-based stats. Identities = 71/213 (33%), Positives = 120/213 (56%), Gaps = 2/213 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ++++DDH ++R G + ++ PD VVGEAS+G + IEL L PD++++DL MPG+ Sbjct: 10 PVRLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREAIELCRRLRPDVVVMDLAMPGV 69 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +GLE +++E+ ++V + E ++ ALK GA GY+LK ++ AL + + Sbjct: 70 DGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAAGYVLKSSPLPRVISALRRLLS 129 Query: 126 GEMVLSEALTPVLAASLRAN--RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE L++ L L L +LT RER++L L+A+G N IAR L I+ Sbjct: 130 GESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIARELVIS 189 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T K HV+++++K+ + R +A + + Sbjct: 190 RGTAKSHVQNIIRKLGVSDRTQAVARAFELGLI 222 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 275 bits (705), Expect = 8e-73, Method: Composition-based stats. Identities = 60/213 (28%), Positives = 116/213 (54%), Gaps = 3/213 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 +P ++++DDH ++ G + P+I VV ASNG + +EL + PD++L+D++MP Sbjct: 6 DKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQPDVVLMDVSMP 65 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 MNG+E ++E+ ++++ ++ ++ E ++ ++ GA GY+LK++ +++A+ Sbjct: 66 IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALKMVQAIKTV 125 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G E+ T L N L+ RE IL+++AQG +K IA L+I+ Sbjct: 126 HQGATYFCESTTSTL---FSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNIS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++ K+ + S E A + Q + Sbjct: 183 YRTVETHRQNIKHKLDIHSTAELAQYALQHGLL 215 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 275 bits (704), Expect = 9e-73, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 2/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I+L+DDH ++R G++ L+ PD+ VVGEAS+GE+ ++ L PD++L+D+ MP M Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDGEEAVKRVRELSPDVVLMDVRMPRMT 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L +R ++ R+V+ + + + VV AL+ G G+LLKD+ + L A+ + A G Sbjct: 62 GLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAGVKGFLLKDVTRDQLADAIRRVANG 121 Query: 127 EMVLSEALTPVLAASLRANRA--TTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 E +L + + LT RE ++++LIA+GL N+ IA L E Sbjct: 122 ETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATVLGTAE 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK ++L K+ ++ R A + + Sbjct: 182 GTVKNQTSNILAKLGVRDRTRAVLRAMELG 211 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 117/210 (55%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R G+ ++ + DI V+GEAS GE+ + +A+ L PD++ +D+ MPG + Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVAQRLQPDVVCMDIRMPGGD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE ++++ + ++V + + +E V AL+ GA G LLKD DL++ + +AA G Sbjct: 65 GLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGACGILLKDSSMTDLVEGVRRAALG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E ++ +LT + A ++ LTPRE D + + QG+ N IA L + ST Sbjct: 125 EGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLFLEPST 184 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + K +RV+ +W + + Sbjct: 185 VKTHLSSAMAKTGTHNRVQLVIWAFRNGVV 214 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 274 bits (703), Expect = 1e-72, Method: Composition-based stats. Identities = 70/210 (33%), Positives = 119/210 (56%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDHP++R G+ ++ D VG+A++G+Q + L E PD++LLDL +P ++ Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQAVNLIEQQQPDVVLLDLRLPQLS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + R + + R +V + + +E + AL GA GYLLKD PE++ +A+ G Sbjct: 62 GIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAIRSIYEG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + + L A ++L+ RE D+L+L+ +G NK IA L+I+E+T Sbjct: 122 GAALQSGIAARVLKRLATEPAE-----DELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +K HV H+ K+ ++SR EA Q + Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLV 206 >UniRef50_P0AF30 Nitrate/nitrite response regulator protein narL n=64 Tax=Bacteria RepID=NARL_ECO57 Length = 216 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 215/215 (100%), Positives = 215/215 (100%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL Sbjct: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL Sbjct: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL Sbjct: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI Sbjct: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 113/212 (53%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GM 65 + + DDH ++R G +I+ D+ VVGEA++G++ +L ++P ++LLD++MP G Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAYDLVARVEPHVLLLDISMPPGE 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NGL +++ S RI++ ++ + + L+ GA GY+LK+ E LL A+ + A Sbjct: 62 NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKVAT 121 Query: 126 GEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE + + L+ L E+ ++L+ RE +I L+AQG NK A +L I+ Sbjct: 122 GETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFISV 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H + K+ + SR E + + Sbjct: 182 KTVETHRSKIYAKLGVNSRAELVHLALKYHLL 213 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 1/215 (0%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 Q IL+ +DH ++R G+K LIS + VVGEA NG IE+ PDLILLDL+M Sbjct: 2 TQSTIKILITEDHALVRKGLKSLISSRSEFQVVGEADNGLAAIEMTRKCKPDLILLDLSM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNGL T+ +L+++ +I+V ++ ++ ++ ALK GADGYLLK +P++L A+ Sbjct: 62 PKMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQELFMAIRA 121 Query: 123 AAAGEMVLSEALTPVLAASLRANR-ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 G+ LS L+ L S+ + LT RE+++ +L+A+G N+ IA L Sbjct: 122 IMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADLLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV H +++KK+ L S E + + + I Sbjct: 182 ISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_C5RGJ7 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridium RepID=C5RGJ7_CLOCL Length = 220 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 9/218 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R G+K ++S+ +I V+GEA NGE+ I L ++ D+IL+D+ MP ++ Sbjct: 2 INVIIADDQKIVREGIKMILSLYDEINVIGEAENGEELINLLQNFMADVILMDVRMPIID 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++E+ + ++++ + N +E + A+K GADGYLLKD+ E ++ A+ G Sbjct: 62 GVEATKIIKERYIHTKVIILTTFNEDEYIFKAIKNGADGYLLKDVGSEFIINAIRSVYNG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNKMIA 177 M+L +T + + + ++ +N LTPRE D+ KL+AQG NK I Sbjct: 122 AMLLDPEVTVKVVKAFNSITNESKNSNEFDNINNKLNSLTPREIDVAKLVAQGKSNKDIC 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 R L +TE TVK +V +L K++L SR E AV+++Q I Sbjct: 182 RSLFLTEGTVKNYVTRILGKLELNSRTELAVFINQAGI 219 >UniRef50_A3CKH3 Two-component system transcriptional regulator (CheY domain and HTH-like DNA-binding domain), putative n=30 Tax=Bacteria RepID=A3CKH3_STRSV Length = 227 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 58/214 (27%), Positives = 116/214 (54%), Gaps = 6/214 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R ++ ++S DI VVG +G++ +E + PD+IL+D+ MP M+ Sbjct: 2 IKVLIADDQALIRESLQIILSAHADIEVVGTVGDGKEVLEKLHRVRPDVILMDIRMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++E+ +I++ + + +E + +ALK GA GY+LK + E+L +A+ G Sbjct: 62 GVLCTKAVKEQYPDVKIIILTTFDDDEFIFSALKYGASGYILKGVSTEELHEAIQTVYRG 121 Query: 127 EMVLSEALTPVLAASLRANRAT------TERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 +++ + + + TE ++ ++ E I++ I G+ NK IA +L Sbjct: 122 GAMINPNIATKVFKIFSQMAQSNFAITVTEENIEDMSRTEWKIIQQIGFGISNKEIAAKL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 ++E TV+ ++ +L K+ L+ R + A+W Q Sbjct: 182 FLSEGTVRNYLSGILAKLNLRDRTQLAIWAVQTG 215 >UniRef50_UPI0001789C57 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001789C57 Length = 225 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 61/224 (27%), Positives = 117/224 (52%), Gaps = 8/224 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M ++ I+L DD P +R G++ ++ + D+ V+GEA GE+ +++ PD++L+D+ Sbjct: 1 MQTEKMIRIVLADDQPFIRKGLRYILDIQKDMQVIGEAMTGEEAVDITLRNVPDIVLMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG G+ + E + ++V+ + + E+ V ++ GA GYLLKD E ++LL + Sbjct: 61 RMPGGTGIMATKSIAEALPNTKVVLLTTFDVEQYVFDGIRAGASGYLLKDTETDELLSGI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLR--------ANRATTERDVNQLTPRERDILKLIAQGLP 172 G + + + + ++ +R + LT RE ++L+L+A G Sbjct: 121 RAMHRGATLFNSSTAKRALDQILTSGMQEPDSDSPGKDRLLGALTERETEVLQLLAYGKR 180 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 N I+ L I+E T K H+ H+++K+ R +A V + ++ Sbjct: 181 NHEISAILCISEGTTKTHIHHIMQKLGALDRTQAVVTAIRMKLV 224 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 68/210 (32%), Positives = 119/210 (56%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH ++R G++ L+ + VV EA NG++ I LA L P++I++D++MP MN Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARELHPEIIIMDISMPDMN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ K+ +++ S+ V+ L+ GA GYLLKD E+L+ A+ + Sbjct: 63 GIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGASGYLLKDCAFEELVNAIQTVLSN 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDV-NQLTPRERDILKLIAQGLPNKMIARRLDITES 185 LS + ++ + A T V ++LTPRER++L+L+A+GL K IA L ++ Sbjct: 123 HTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLHVSVK 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ H +++ +K+ + S E + +E + Sbjct: 183 TVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_C5C7H0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=9 Tax=Bacteria RepID=C5C7H0_MICLC Length = 230 Score = 273 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 76/228 (33%), Positives = 125/228 (54%), Gaps = 12/228 (5%) Query: 1 MSNQE--PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 MS++E P + L+DD ++R+G+ L+ PD+TVV EA +G + + D++L+ Sbjct: 1 MSSEETAPVRVALVDDQALIRSGLAMLVDSQPDLTVVAEAGSGREAVASVSVAGADVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+G+E L + + R+VV + + +E A++ GA G+LLKD PE+LL Sbjct: 61 DVRMPEMDGIEATRALLRRPDAPRVVVLTTFDLDEYAFDAIEAGASGFLLKDAPPEELLA 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRA----------TTERDVNQLTPRERDILKLIA 168 A+ G+ V++ + T L + + V LTPRER++L L+A Sbjct: 121 AIRTVHRGDAVIAPSTTRRLLTHMAPRLRSDQVRSAECEEQQAAVASLTPREREVLVLMA 180 Query: 169 QGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 QG N IA L ++E+TVK HV +L K+ + RV+A + H+ + Sbjct: 181 QGAANLEIAAELVLSEATVKTHVGRVLAKLGARDRVQAVLIAHRAGLV 228 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 273 bits (700), Expect = 2e-72, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 113/218 (51%), Gaps = 5/218 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M N +LL DDH ++R G++ L+S DI +VGEA G + +++A+ L PD+IL+D+ Sbjct: 28 MPN---IRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMAQKLTPDVILMDI 84 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP MNGLE K+ E + S +++V S ++ V + GA GYL+K DL+ A+ Sbjct: 85 AMPLMNGLEATRKIAEVAPSAKVLVLSSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVN--QLTPRERDILKLIAQGLPNKMIAR 178 + G S + L +RA A +LT RE + L I G PNK+IA Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + I+ TV+ H + ++ K+ + + + + Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMI 242 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 127/220 (57%), Gaps = 6/220 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP----DLI 56 M+ ++++DDH M+RTG++ + + P VV EA +G+ I + E+ P D+I Sbjct: 1 MTGTNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVI 60 Query: 57 LLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 L+DL MPGM+G+ET +L + + +I++ + ++ V A++ GA Y+LK + E+L Sbjct: 61 LMDLMMPGMDGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMI 176 + ALH A G V++ ++ L LR A + +LT RE+++L LIA+G NK I Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGD--EELTEREKEVLLLIAEGRSNKEI 178 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ TVK HV ++L K +L+ R + AV H++ Sbjct: 179 GEELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHRKGWV 218 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 71/216 (32%), Positives = 126/216 (58%), Gaps = 4/216 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N+ +++ DDH + R G+K L+ +VGEASNG++ +EL +L PDL+L+DL Sbjct: 1433 MTNKTGLRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEAVELVHNLSPDLVLMDL 1491 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MP M GL+ + + S +++V + S ++D+ A+K GA G++ K++E E+ + L Sbjct: 1492 SMPVMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLL 1551 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGL-PNKMIARR 179 GE ++ L L +R + LT RE++IL+L+ G+ K ++R+ Sbjct: 1552 RNVIRGEPAITPRLAGKLIDEF--SRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQ 1609 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L ++E TVK H++++L K+ L+SR + W Q + Sbjct: 1610 LGVSEHTVKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +I+L DDH ++R G+K L+ D VVGEAS+G + + L ESL P +++ DL M GM+ Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEAVNLVESLQPGVLVTDLMMGGMS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ ++S +V+ S+ +E V AL+ GA Y+LKD E+L++++ +A G Sbjct: 62 GIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREAVQG 121 Query: 127 EMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 LS L+ + ++ AT+ LT RER++L L+AQG IA RL I+ Sbjct: 122 HRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLFISP 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VH +M++K+ L+++ + + Q I Sbjct: 182 RTVEVHRANMMRKLDLRNQTQLLRYALQRGII 213 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 273 bits (700), Expect = 3e-72, Method: Composition-based stats. Identities = 60/215 (27%), Positives = 115/215 (53%), Gaps = 2/215 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +LL DDHP++R G+ ++ I +VGEA +G++ + L P+++L+DL+MP Sbjct: 16 KKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSKVRELSPEIVLMDLDMP 75 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M+GLE +R + ++++ S+ +++ V+ +K GA GY+LKD +L++A+ Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGAQGYVLKDAPLTELVRAIESV 135 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQ--LTPRERDILKLIAQGLPNKMIARRLD 181 G S ++ ++ A E N LT RE ++L +IA+G NK +A R+ Sbjct: 136 HGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMASRMG 195 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H + ++ K+ + + + I Sbjct: 196 VGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGII 230 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 273 bits (699), Expect = 3e-72, Method: Composition-based stats. Identities = 79/214 (36%), Positives = 123/214 (57%), Gaps = 5/214 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P +LL+DDH ++R G++ +S+ I VVGEA+NGE+ + AE L PD++++DL Sbjct: 5 TPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAAERLHPDVVIMDLM 64 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M+G++ LR + ++ + + E V A+ GA GY+LKD + L A+H Sbjct: 65 MPVMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAMGYMLKDASSDTLADAIH 124 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AA GE+ L L R T LTP+E +L+LIA+G N+ IAR Sbjct: 125 AAARGEVRLHPEAARRLVRDFR-----TPEMRETLTPKEVIVLQLIARGYSNRDIARDQG 179 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TE+TVK HV +L K+ L+SR +AA++ + + Sbjct: 180 VTEATVKTHVSRLLGKLGLESRTQAALYALRHGL 213 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 273 bits (699), Expect = 4e-72, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD P++R+ ++ +++ D+ + GEA GE+ + L L PD++L+DL MPGM Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDLRMPGMG 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ S R++V + + ++ V AL+ GA G+L+K+M +D+L A+ A G Sbjct: 63 GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAAGFLIKNMSLDDILDAVRTVAHG 122 Query: 127 EMVLSEALTPVLAASL---RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +L+ ++T L + R R ++ +T RER++L L+ +GL N IA L ++ Sbjct: 123 NGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIADELRLS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +TVK ++ +L K+ + RV + ++ + Sbjct: 183 HATVKTYITRLLSKLGARDRVHLVIAAYEAGL 214 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 7/223 (3%) Query: 1 MSNQEP---ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 M + P T+L++DD P++R G++ ++ P + VVGEA +G + A L PD+ L Sbjct: 1 MPDGHPRSATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTARRLRPDVTL 60 Query: 58 LDLNMPGMNGLETLDKLRE-KSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDL 116 +D+ MPGM+G+E + +VV ++ + +E V AL+ GA G +LKD +L Sbjct: 61 MDVQMPGMDGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGARGLVLKDAPTSEL 120 Query: 117 LKALHQAAAGEMVLSEALTPVLAASLRANRA---TTERDVNQLTPRERDILKLIAQGLPN 173 + A+H AAAG+ +LS ++T L +LT RERD+ +L+ QGL Sbjct: 121 VAAIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLST 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 A RL + +STVK HV+ + +K+ ++ RV+A ++ ++ + Sbjct: 181 AEAAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLV 223 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 272 bits (698), Expect = 4e-72, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 119/215 (55%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + P +L+ DDH ++R G++ ++ P I VVGEASNG ++LA PD+++LD+ Sbjct: 6 APTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVPDVVVLDIT 65 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP +GL+ +LRE R+++ S+ + E V ++ G GYLLKD E+L A+ Sbjct: 66 MPEESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIR 125 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AG S A+ L ++ + ++ LTPRERD+L +A+GL NK IA L Sbjct: 126 AVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELG 185 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H + +++K+++ S + + I Sbjct: 186 ISRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 117/212 (55%), Gaps = 5/212 (2%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 ++L+DDH M+R G+K +++ PD+ VV EAS+GE+G+ A + PD++++DL MP Sbjct: 2 NTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALEVKPDVVVMDLVMPK 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M G+E L ++ +IV+ + E + L+ GA GY+LK +++L A+ + A Sbjct: 62 MTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE + + + R + LT RER+IL L+A+G N+ IA I+ Sbjct: 122 LGEYAIETEVEKKVEHHKR-----HPDLHDDLTAREREILTLLAKGYDNQRIADESFISL 176 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV ++L K+ + R +A V+ Q + Sbjct: 177 KTVKTHVSNILSKLAVSDRTQAVVYAFQHGLV 208 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 272 bits (697), Expect = 7e-72, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 126/210 (60%), Gaps = 2/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DDHP+LR G+++++ I VV E +G+ I ++ +LD D++L+DLNMPG+N Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQVVCEVGDGQGAINVSRTLDFDILLMDLNMPGVN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE +R ++ + I+V +V + +E V L+ G GYLLKD++P+ L+ ++ + +G Sbjct: 62 GLEACRVIRRENETIGILVLTVDDSDEKVFQVLQLGVAGYLLKDVDPKTLIDSIRKVHSG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +LS A+T L L RD L+ RE IL + +G N+ I + L I+E T Sbjct: 122 QPILSPAVTGKLLGQLVHPTQN--RDTCGLSDRELQILTYVVKGSSNREIGQALFISEKT 179 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + +K+ ++ R +AA+ + ++ Sbjct: 180 VKNHLSSIFRKLAVEDRTQAALKAVKLKLV 209 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 272 bits (696), Expect = 8e-72, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 126/223 (56%), Gaps = 10/223 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +L+IDDHP+ R G++ + A D+ VVGEA NG++ I+LAE L PD++L+D+N+P Sbjct: 2 EQRIRVLIIDDHPLFRQGIRWSLEEAGDMEVVGEAENGQEAIKLAERLVPDVVLVDINLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G+NGLE ++ + ++V SV ++ + A+K GA Y KD+ P DL++ + + Sbjct: 62 GLNGLEVARVIKRREPRIGLIVISVYEDDDQLFQAIKVGAAAYSSKDVHPRDLVRMIREV 121 Query: 124 AAGEMVLS------EALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPN 173 A G+ +++ + + R AT + LT RE +IL IA+GL N Sbjct: 122 ARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARGLSN 181 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K IA +L I+ TVK H+ +L K+++ R A ++ Q Sbjct: 182 KEIASQLSISGQTVKNHITSILSKLQVNDRTMAVIYAIQRGWI 224 >UniRef50_D1BGN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Actinomycetales RepID=D1BGN7_SANKS Length = 258 Score = 272 bits (696), Expect = 9e-72, Method: Composition-based stats. Identities = 67/221 (30%), Positives = 119/221 (53%), Gaps = 6/221 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 +LL+DD + R+G+ ++ + VVG+A++G + + + + L PD++L+D+ Sbjct: 29 PGTPRIRVLLVDDQELFRSGIAVIVDAQDGLEVVGQAADGSEAVRMVDDLSPDVVLMDVR 88 Query: 62 MPGMNGLETLDKL------REKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPED 115 MP ++G+E ++ ++ R++V + + ++ A++ GA G+LLKD P Sbjct: 89 MPELDGVEATRQIFAPARAASRAGPVRVIVLTTFDLDDRAAAAIRYGASGFLLKDATPAM 148 Query: 116 LLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 L A+ AG VL+ L R + + LTP+ER++L +A GL N Sbjct: 149 LRDAIRTVHAGNAVLAPDDLSTLLDGRFRARRPSPPGLEDLTPKEREVLAAVAAGLNNAE 208 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IARR ++ESTVK HV +L+K+ L+ RV+ V H+ + Sbjct: 209 IARRAFVSESTVKTHVGAVLRKLGLRDRVQVVVLAHEHGLV 249 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 79/221 (35%), Positives = 121/221 (54%), Gaps = 11/221 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 T+ L+DD ++R G + ++ DITV EA++G++ +E A + D+IL+D+ MP M+ Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENAANTPVDVILMDVQMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE ++ + RI+V + + E VV A++ GA G+LLKD PEDL+ A+ Sbjct: 62 GLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGASGFLLKDTAPEDLIAAVRTVGEQ 121 Query: 127 EMVLSEALTPVLAASLRANRATTE-----------RDVNQLTPRERDILKLIAQGLPNKM 175 V+S A T VL S+R + T+ ++ LTPRE++IL LIA G N Sbjct: 122 SAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALGKSNTE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+ TVK HV +L K + RV A ++ + Sbjct: 182 IAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLV 222 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 271 bits (694), Expect = 1e-71, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 1/212 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +L++DDH ++R+G++ ++S DI VVGEA++G GI +A+ + PD++LLD++MP Sbjct: 2 KKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMAQKMRPDVVLLDISMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+GLE L L R+++ ++ V GA GY+LK + L +A+ Sbjct: 62 MSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQAVRAVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +GEM + ++T + A L R + L+ +E+ +L LIA G N+ IA +L I+ Sbjct: 122 SGEMYIQPSITKAVVAELT-ERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISV 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ + +++K+ K R + + + Sbjct: 181 KTVETYKYRIMEKLNCKKRSDLVKFALDNGLL 212 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 270 bits (693), Expect = 2e-71, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 1/216 (0%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S+ +L++DDH + R G+ +++ P I VVGEA NG ++ DL+++DL Sbjct: 9 SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEADNGAAALDFVARHPVDLVMMDLQ 68 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP ++G+E +++ + I++ +V + ++ AL+ G GYLLKD +++ A+ Sbjct: 69 MPVIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVR 128 Query: 122 QAAAGEMVLSEA-LTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 Q GE L+ + L A + LTPRE+ +L+L+ QG N+ IAR L Sbjct: 129 QVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAREL 188 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TVKVHV+H++ K+ + R +AAV + + Sbjct: 189 IISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLV 224 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 65/214 (30%), Positives = 116/214 (54%), Gaps = 1/214 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 P I+L DDH ++R G++ L+ P +T+VGEA +G + + L + PD+ ++D+ MP Sbjct: 2 PAPLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRETVTLVHTFAPDIAIMDITMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G+NG + ++ + ++++ S+ E+ V+ AL+ GA GYLLKD +L AL+ Sbjct: 62 GLNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATT-ERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE LS +++ + A R LTPR R+I++LIA+G K IA L++ Sbjct: 122 RKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T++ H H++ ++ L + + + Sbjct: 182 SVKTIETHRMHLMARLGLHDVAGVVRYALRTGLI 215 >UniRef50_UPI0001789139 two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=UPI0001789139 Length = 216 Score = 270 bits (692), Expect = 2e-71, Method: Composition-based stats. Identities = 68/212 (32%), Positives = 121/212 (57%), Gaps = 5/212 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAES-LDPDLILLDLNMPGM 65 ++L+ DD P +R +K L+ M PDI V A +GE+ + L L D++L+D+ MP Sbjct: 2 ISVLIADDDPFIRESLKLLVGMDPDIEVSAVAEHGEEALSLLMDGLHADVVLMDIRMPVC 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++RE+ R+++ + + ++ +V AL+ GA GYLLK++ P+ +++ + Sbjct: 62 DGVEGTRRIRERYPDVRVLMLTTFDDDDYIVEALRNGASGYLLKNIPPDRIIQGIKTVHD 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVN----QLTPRERDILKLIAQGLPNKMIARRLD 181 G M++ + L LR R LTP E+ ++ LIA+GL NK IA +L Sbjct: 122 GNMLIHPDIARKLTGMLRPTPQPVPRSAELEQFGLTPAEKRVVALIAEGLSNKEIAAQLY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 ++E TVK +V +L K+ L+ R + A++ ++ Sbjct: 182 LSEGTVKNYVTEILGKLNLRDRTQIAIFYLKK 213 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 270 bits (691), Expect = 3e-71, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 123/211 (58%), Gaps = 2/211 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 ILL DDH +LR GVK L++ D+ VV EA NGE+ + +A + PD+ ++D+ MP M Sbjct: 2 TIKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIAGEIRPDVTVMDVMMPQM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++ E S R+V S+ V LK GA G+LLKD +L++A+ + Sbjct: 62 DGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVMD 120 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+ L +++ ++A ++ D+ LTPRE++IL L+A+G N+ +A RL ++ Sbjct: 121 GEIYLGPSISHIVAKLYVSSL-HDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIK 179 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV H +H++ K+KLK+ + + + + Sbjct: 180 TVGTHRQHIMNKLKLKNLADLVKYAIRNGMI 210 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 124/210 (59%), Gaps = 5/210 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DDH ++R G++ ++ + +I VVGE +NG + + LA L PD++L+DL MP M+ Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELCPDVVLMDLLMPVMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++R+ +V + S + V+ A++ GA G+LLK+ E +DL A+ AAAG Sbjct: 63 GVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAIGFLLKNAEADDLRNAVKAAAAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 ++ +S A L +R QLT RE ++L ++A+G NK IAR L I + T Sbjct: 123 QIHVSPAAISRLMGQVREPSGP-----EQLTERETEVLTMLARGKANKEIARDLRIGQQT 177 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK +V H+L K+ + SR +AAV+ Q + Sbjct: 178 VKTYVSHILTKLGVHSRTQAAVYAVQSGLV 207 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 121/212 (57%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 E +L+ DDH M+R G++ + + I V GEA++G + E A L+PD+ILLDL MP Sbjct: 5 PEVIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERAAELEPDVILLDLVMP 64 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++G+ ++ LRE + R++V + ++ A++ GA GY+ KD++P L A+ Sbjct: 65 GVDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGARGYVYKDVDPAALAAAVRSV 124 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG ++L + L S A LT RER++L LIAQG N+ IAR L + Sbjct: 125 HAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARALVLA 184 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV ++L K+ + R +AA+W + I Sbjct: 185 EKTVKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 269 bits (690), Expect = 4e-71, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 4/211 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 +L +DDH M+R G+ +S DI VVGE ++G++ I A L PDLIL+DL M M Sbjct: 2 TIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMEDM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++++ ++++ + +++V AL G D Y+LK +D+ A+ + + Sbjct: 62 DGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTSR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE V + + ++ LT RE +IL LIA+G N+ IA IT Sbjct: 122 GESVFEPEVLVKMRNRMKKR----AELYEMLTEREMEILLLIAKGYSNQEIASASHITIK 177 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV ++L K++++ R +A ++ Q + Sbjct: 178 TVKTHVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 269 bits (690), Expect = 5e-71, Method: Composition-based stats. Identities = 79/212 (37%), Positives = 123/212 (58%), Gaps = 9/212 (4%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +L++DDHP +R G+ LI P + VV EAS+GE+ IE+ + L PD++L+DL MPG Sbjct: 18 ATIRVLVVDDHPPMRVGLVALIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLRMPG 77 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M G+E + +R+K+ R++V S + +ED+ AL+ GA YLLKDM E++ + Sbjct: 78 MGGVEAILAIRKKAPEARVIVLSTYDWDEDIHRALQSGAKSYLLKDMPIEEIASTVRAVY 137 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 AG+ L ++ L + QLT RERD+L+ + +G NK IA L I+E Sbjct: 138 AGDTSLPRSVAERLTERAQR---------EQLTERERDVLESLIKGRSNKEIASSLCISE 188 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+K + K++++ R AA+ + I Sbjct: 189 DTVKSHLKTLFAKLRVRDRTGAAIEAIRHGIV 220 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 68/214 (31%), Positives = 122/214 (57%), Gaps = 2/214 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +L+ DDH +LR G+ +L+S DI VVGEA +G++ +++ PD++L+D+ MP Sbjct: 2 AKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEAVDMVAQFKPDVVLMDIVMPR 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 + G+E +++ + S I++ + + ++ L+ GA GYLLK + ++++ A+ Sbjct: 62 LTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGASGYLLKSAKSDEIVGAIRAIK 121 Query: 125 AGEMVLSEALTPVLAASL--RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AGE VL T L + + + ++ QL+PRE +IL+L ++GL N+ IA +L + Sbjct: 122 AGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADKLTL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TVK H+ ++ KM+ R EA V +E Sbjct: 182 SMRTVKAHLSNIFNKMRCSCRTEAIVKGFREGYV 215 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 269 bits (689), Expect = 5e-71, Method: Composition-based stats. Identities = 64/209 (30%), Positives = 113/209 (54%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I+L+DDH + R+G++ L+ I VVGEAS GE+ + + + + D++ +D MPGMNG Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTGEEFLAMLPATEADVVFMDFAMPGMNG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ET +K +++ S+ E ++ GA G+L+KD +++L+A+ AAG Sbjct: 65 AETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVAAGG 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 E + LA+ ++ + E +L+ RE +IL + +GL N+ IA L I++ TV Sbjct: 125 TYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISKRTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 H ++L+K K+ V+ + + Sbjct: 185 DKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 118/209 (56%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DD ++R G++ L A DI VVGEA G+ + LA L PDL+L+DL MPGM+ Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEADGGQAAVRLAGELCPDLVLMDLRMPGMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++ + S R+V + + ++ + AL GA G+L+KD P +LL+A+ +AA G Sbjct: 62 GITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELLEAIRKAADG 121 Query: 127 EMVLSEALTPVLAA-SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + S + + ++RA + + +LT RER++L L+ G N IA RL + + Sbjct: 122 DTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERLHLGVT 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK H+ ++ K +RV AV + Sbjct: 182 TVKTHIASLMTKTGCSNRVRLAVLAVRSG 210 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 269 bits (689), Expect = 6e-71, Method: Composition-based stats. Identities = 70/215 (32%), Positives = 119/215 (55%), Gaps = 5/215 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++R G + +S P+I VVG A G + E +L PD++L+D+ MP + Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQVRALRPDVVLMDIRMPHGD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL ++ + R++V + + +E V AL GA G+LLKD +PE+L A+ A G Sbjct: 62 GLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAAGFLLKDADPEELSSAVLTVAEG 121 Query: 127 EMVLSEALTPVLAASLRANRATT-----ERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 VLS LT L + + L+ RE D+++L++QGL N IA L Sbjct: 122 GSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDIADSLS 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + +STVK H+ ++ KK+++++RV+ +W ++ + Sbjct: 182 LEQSTVKSHISNICKKLQVRTRVQIVIWAYRNNVI 216 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 268 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 121/210 (57%), Gaps = 2/210 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L+ DDH + R ++ L+ + VVGEA G++ +ELA L PD++L+DL MPGM+G Sbjct: 2 RVLIADDHALFRDSLRTLLEAR-GVEVVGEAETGKEAVELARELRPDVVLMDLKMPGMDG 60 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 L + + ++VV + S +ED+ A+K GA GY+ KD+ + + L A+ GE Sbjct: 61 LAATRMISAEMPEVKVVVLTASEDDEDLFEAVKSGALGYMFKDVRSDQFFELLEAASRGE 120 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGL-PNKMIARRLDITEST 186 + L L + ER+ LT RE++IL+L+ QG+ NK +A RL ++E+T Sbjct: 121 PAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAERLILSENT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H++++L K+ L++R + + Q + Sbjct: 181 VKYHLRNILDKLHLQNRTQVVAYALQHGLV 210 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 268 bits (688), Expect = 8e-71, Method: Composition-based stats. Identities = 71/222 (31%), Positives = 124/222 (55%), Gaps = 7/222 (3%) Query: 1 MSNQEPA--TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M+ P I+++DD ++R G++ ++ P ITVV E ++GE+ + L + PD++L+ Sbjct: 1 MNTAAPTQRRIIIVDDDALVRAGLRMILGGDPGITVVAEGTHGEEAVSLYAAHQPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP +GL + + ++V + + +E +V AL+ GA G+LLKD P DL++ Sbjct: 61 DIRMPVRDGLSATKDIVTRWPHANVLVLTTFDTDEFIVKALRAGARGFLLKDTSPPDLVR 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLR-----ANRATTERDVNQLTPRERDILKLIAQGLPN 173 A++ A G LS ++T L A + + R V QLT RE D+ + IAQG N Sbjct: 121 AVNLAGDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + I++ L ++ TVK H+ + K + +RV+ A+ +H + Sbjct: 181 QEISQTLYMSIPTVKTHISRIFTKFDVDNRVQIAIRMHDAHL 222 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 1 MSNQE-PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLD 59 M+ +LL DDH ++ G+ LI +TVVGEA++GEQ ++LA + PD++L+D Sbjct: 1 MTEPPATIRVLLADDHRLVLDGLSALIDSVDGLTVVGEATSGEQAVDLAGTEHPDVVLMD 60 Query: 60 LNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 + MPG+ G+E ++ + +V+ ++ +E V AL+ GA GYLLK + +D+++ Sbjct: 61 IEMPGIGGVEATRRITTAQPTIAVVMLTMYGEDEFVFAALRAGARGYLLKGAQQKDVVRT 120 Query: 120 LHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 + A G+ V + + + + A +LT RER++L L+A G PN IAR Sbjct: 121 IGAVARGDAVFGPDVAHRVLRTFTSPPAENA-PFPELTEREREVLSLLANGWPNSRIARH 179 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 L +T TV +V ++L K+ R A + + + Sbjct: 180 LQLTPKTVANNVSNILAKLHAPDRTAAILRARRAGL 215 >UniRef50_A4FAA4 Two component system response regulator n=2 Tax=Actinomycetales RepID=A4FAA4_SACEN Length = 218 Score = 268 bits (687), Expect = 9e-71, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 124/213 (58%), Gaps = 4/213 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL +D ++R G+++++ A D+TV+ EA +G + + PD++++D+ MP ++ Sbjct: 2 TRILLAEDEQIVRAGLRKILESAGDLTVIAEAGDGAEAVTGVRRHAPDVVVMDIQMPRLD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL ++ +I++ ++ + + +V +A++ GA G+LLKD PE+L+ A+ A G Sbjct: 62 GLAATRQITSLPAPPKILILTMFDFDANVYSAIEAGASGFLLKDARPEELINAIRVIADG 121 Query: 127 EMVLSEALTPVLAASLRANRATTER----DVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + +LS ++T L + + +++LTPRER IL L+ GL N IA+ L Sbjct: 122 DAMLSPSVTRRLLSHFADRNSPRGPTAVRGLDELTPRERQILSLVGGGLSNASIAKTLGA 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TESTVK HV +L K+ ++RV+ A+ H I Sbjct: 182 TESTVKGHVSRLLMKLDCENRVQLALIAHNAGI 214 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 118/210 (56%), Gaps = 2/210 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 +++ +DH +LR G+K L+ P + V GEAS+G+ ++L + P+L+L+D++MP M+G+ Sbjct: 7 LIIAEDHTLLREGLKSLLQSVPHLIVTGEASDGQMAVDLCDRNQPELVLMDISMPRMDGV 66 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + ++++ R++V +V E V AL GADGY+LKD ++ + A+ G++ Sbjct: 67 QATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGGKI 126 Query: 129 VLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 LS ++ + A + LTPRE++I +L+A+G N+ IA L ++ T Sbjct: 127 YLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSVKT 186 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H ++++K+ + S E + I Sbjct: 187 VEKHRSNLMQKLGVHSAAELRALALERGII 216 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 268 bits (687), Expect = 1e-70, Method: Composition-based stats. Identities = 71/219 (32%), Positives = 129/219 (58%), Gaps = 7/219 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + ILL+DDH ++R G+K + + +VGEA+NG GIE + L PD++++D+ MP Sbjct: 2 KKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDGIEAVKQLKPDVVIMDITMPE 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E D + +K ++++ S+ ++E ++ +++ GA GYLLKD++ ++ +KA+ Sbjct: 62 MSGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAYGYLLKDVDKDEFIKAITAVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTER-------DVNQLTPRERDILKLIAQGLPNKMIA 177 G+ + A++ VL + + T+ D +LT RE+ ILK+I G N+ IA Sbjct: 122 NGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNNREIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ T++ H +++KK+K+K+ VE E+I Sbjct: 182 DGLGISIRTIETHRANIMKKLKVKNAVELVRIAIDEKIV 220 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 119/210 (56%), Gaps = 8/210 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL+ DDHPMLR G+ ++ P VVGEA +GE+ + LA L PD++LLDL MPG Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDGEEVLRLASGLRPDVVLLDLEMPGTG 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E L +LR ++VVF+ + E ++ AL+ GA G LLK ++ A+ AG Sbjct: 64 GVEVLRRLRGLDDPPKVVVFTAYDD-ERLLEALREGARGCLLKGASRTEIFDAVRTVHAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 V+ +T + +R LTPRE ++L+L+A+GL N+ +AR L I+E T Sbjct: 123 GSVIPPEITARVLKEMRGES-------EPLTPRELEVLRLVARGLTNREVARALFISERT 175 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV +L K++ ++R +A + + Sbjct: 176 VKFHVSSLLAKLRAENRTQAVAIARERGLL 205 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 124/210 (59%), Gaps = 4/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDHP + G+K ++ I +VG + NGE+ I+ L+P++ ++DL +PG+N Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIVGTSGNGEKAIKEIAKLNPEVAVVDLRLPGLN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++++K+ +++ S N E++V+ A+ GA Y++KD PE L++A+ A G Sbjct: 62 GIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAIKAARRG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E VL+ + + TE LTPRE+++L + +G N+ IA+ L I+E+T Sbjct: 122 EPVLTPGVAKKIMKRAARKGRKTEP----LTPREKEVLACLVRGNSNRDIAKTLCISETT 177 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV ++LKK+ +K R +A + + + Sbjct: 178 VKTHVSNILKKLDVKDRTQAVIKAIENNLV 207 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 115/216 (53%), Gaps = 3/216 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +LL DDHP++R G++ L+ PDI VVGEA ++ +ELA +L PD+ +LD++M Sbjct: 2 TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELARTLQPDVAVLDISM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 PG NGLE L ++ L R ++ +V E ++ L+ G GY+ K DL++A+ Sbjct: 62 PG-NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGGSGYVRKSSLHTDLVEAIRL 120 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTE--RDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A GE+ + +A L + T E L+ RER++L+L A G + IA +L Sbjct: 121 VARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ + +++K+ R E + + + Sbjct: 181 FLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLL 216 >UniRef50_D0LE76 Response regulator receiver n=2 Tax=Actinomycetales RepID=D0LE76_GORB4 Length = 228 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 7/223 (3%) Query: 1 MSNQEP-------ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDP 53 M+ P +LL+DD ++RTG+++++ + +VGE ++G + P Sbjct: 1 MTTTRPDETAAPAIRVLLVDDQELIRTGLRRILRVRDGFHIVGECADGSEVPAAVAEHSP 60 Query: 54 DLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEP 113 D++++DL M ++G+ L + ++V + + ++ + AL+ GA G++LKD Sbjct: 61 DVVVMDLRMRNVDGITATSMLAALNDPPPVLVLTTFDDDKLLSGALRAGAAGFILKDSPA 120 Query: 114 EDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPN 173 E L+ A+ L A+T + R + ++LT RE D+L+L+A+G N Sbjct: 121 ESLIWAVRAVVRDGAFLDPAVTGRVLTGYRRSTTGDIATPDELTERETDVLRLVARGRTN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA L I+E TVK H+ H+ K+ L+ R A V+ + Sbjct: 181 AEIAAGLGISEVTVKSHINHIFTKLDLRDRAAAIVYAFDHSLV 223 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 267 bits (685), Expect = 1e-70, Method: Composition-based stats. Identities = 70/216 (32%), Positives = 124/216 (57%), Gaps = 3/216 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + I+L DDH +LR G+K L++ PD+ V+GEAS+GE+ I+ + L PDL+LLDL MP Sbjct: 2 NKKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEAIDRVDDLHPDLVLLDLTMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +NG++ +++L +K +I+V ++ + EE + L+ GA GY+LK +LL A+ Sbjct: 62 KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAIRTV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERD---VNQLTPRERDILKLIAQGLPNKMIARRL 180 A GEM + + + E++ + QL+ RE ++L+ +A G N+ IA L Sbjct: 122 ARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIADLL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ + +++K+++ R E + + I Sbjct: 182 HVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 118/211 (55%), Gaps = 7/211 (3%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDHPM+ G++ ++ DI VVG S+G + I AE+L PD+IL+DLNMP + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVPDVILMDLNMPDV 82 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 GL + ++E+ R+++ S+ + E + TAL GA GY+LKD++PE++ A+ Sbjct: 83 GGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVMR 142 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE L L ++ LT RE+ IL +AQG NK +A+ LDI+ Sbjct: 143 GEQYLCTGAAGSL-------SPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVR 195 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H K++ +K+ + S + + + Sbjct: 196 TVETHRKNIKRKLGISSTAGLTRYALEHGVL 226 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 267 bits (685), Expect = 2e-70, Method: Composition-based stats. Identities = 78/218 (35%), Positives = 125/218 (57%), Gaps = 8/218 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL DDH +LR G+K++++ D+ VVGEA +G++ + L PD++LLD+NMPG+ Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTLMLKPDILLLDINMPGLT 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL+ +L++ +I+ ++ + + V+ LK GA GYLLKD+EP L+KA+H G Sbjct: 63 GLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGALGYLLKDVEPNVLIKAIHMVNEG 122 Query: 127 EMVLSEALTPVLAASLRANRAT--------TERDVNQLTPRERDILKLIAQGLPNKMIAR 178 + L L + + E +LTPRE D+L IA+GL N+ I + Sbjct: 123 NPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSNQDIGK 182 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L ++E TVK H+ + K+K+ R +A V+V + +I Sbjct: 183 ALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLKNKIV 220 >UniRef50_B0C7V6 Two-component response regulator n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C7V6_ACAM1 Length = 222 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 126/223 (56%), Gaps = 8/223 (3%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ++P +LL++DH ++R G+K S+ D V+GEA NG+Q I+LA L P+++L+D+ Sbjct: 1 MS-EQPIHLLLVEDHALMRMGLKGQFSLESDFEVIGEAENGQQAIDLAAQLQPNIVLMDI 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P ++G+ K++ R++ S + VV L GADGY LK ++ + LL + Sbjct: 60 ELPILDGISATQKIKATCPDIRVLALSAFGKDNQVVGMLAAGADGYCLKSIDWQQLLAVI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQ-------LTPRERDILKLIAQGLPN 173 G L + LA+ L++ T ++ L+ RER++L+LI++G N Sbjct: 120 RLIQGGGTYLDPQIAHKLASMLKSANTPTTAPAHRQTAPATVLSDREREVLQLISEGCSN 179 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + IA +L ++ T+K +V+ +L K+ + RV+AA +E + Sbjct: 180 QEIANQLYLSLGTIKSYVRMILNKLSVDDRVQAAAKAVREGLI 222 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 267 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 70/208 (33%), Positives = 112/208 (53%), Gaps = 1/208 (0%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGL 68 ILL+DDH +LR G++ L+ PD+ VVGEA + I A +L PDLILLDL++ +GL Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATTLQPDLILLDLSLTNSSGL 63 Query: 69 ETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEM 128 + LR + RI+V ++ + E V AL GA GY+LK +L+ A+ GE+ Sbjct: 64 AAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRGEL 123 Query: 129 VLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 + ALT L + + L+ RER++L L+A+G IA +L+++ TV+ Sbjct: 124 YIHPALTRRLLEDIL-PQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTVE 182 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + ++K+ L+SR + + Sbjct: 183 TYRTRGMEKLGLRSRAALVQFALDHNLL 210 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 266 bits (683), Expect = 2e-70, Method: Composition-based stats. Identities = 63/214 (29%), Positives = 115/214 (53%), Gaps = 3/214 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 I+L+DDHP+ R+G+K ++ D V+ EA +GE IE+A +PD+I++D++MPG+ Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMAAEANPDIIIMDISMPGL 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +++ K RI++ ++ E + +L GA GY+LK +L+ A+ Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHAVKLVMN 121 Query: 126 GEMVLSEALTPVLAASLRANR---ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 GE + L P L + + + + +L+ RE+++LK IA G K I+ L I Sbjct: 122 GEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELFI 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV + K +++K+ K + + + I Sbjct: 182 SIKTVDTYKKRVMEKIGSKKKSALVRYALKHNII 215 >UniRef50_C7NKN7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=138 Tax=Bacteria RepID=C7NKN7_KYTSD Length = 244 Score = 266 bits (683), Expect = 3e-70, Method: Composition-based stats. Identities = 66/221 (29%), Positives = 120/221 (54%), Gaps = 16/221 (7%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I L+DD ++R G + ++ PD++VVGEA +G+ ++ +++ D++L+D+ MP ++G Sbjct: 4 RIFLVDDQSLVRAGFRMVLDAQPDMSVVGEAPDGQSAVDQLKTIAADVVLMDIRMPRLDG 63 Query: 68 LETLDKL--REKSL---SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 +E L R+K ++VV + + +E AL+ GA G+LLKD PE+LL A+ Sbjct: 64 IEATRVLLGRDKHPGGAEPKVVVLTTFDMDEYAYAALEAGASGFLLKDAGPEELLAAIRA 123 Query: 123 AAAGEMVLSEALTPVLAASL-----------RANRATTERDVNQLTPRERDILKLIAQGL 171 A+G+ V++ + T L + E LT RE ++ + +A GL Sbjct: 124 VASGDAVVAPSTTKRLLERFVPTLTPEVADVASPAEQQEYLREVLTEREYEVFEAVAAGL 183 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQ 212 N IA+ L + E+T+K H+ +L K+ + RV+ + ++ Sbjct: 184 SNTEIAKELFVAEATIKTHIGRLLFKLGCRDRVQLVITAYE 224 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 71/211 (33%), Positives = 121/211 (57%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++++DDH ++R G++ L+ PD++VV EA NG + ELA L P ++L+D+ MPG+N Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELAADLAPHVVLMDMTMPGLN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ +L R+++ S+ + V A + GA GYLLKD +L++A+ Q A G Sbjct: 62 GIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVACG 121 Query: 127 EMVLSEALTPVLAASLRANRATT-ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 EM + + V+ + + LTPRER++L+LIA+G K A +L+I Sbjct: 122 EMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNINVK 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV H + ++KK+K++S E + +E + Sbjct: 182 TVDTHRQQIMKKLKMRSVAELTKYAIREGLI 212 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +LL+DDH ++R G++ + + I VVGEA+NGE+ ++ AE L P+++++DL M Sbjct: 10 TTPTVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEAERLRPEVVVMDLMM 69 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P M+G+ +LR + ++ + + E V A++ GA Y+LKD + L A+H Sbjct: 70 PVMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYMLKDASSDTLADAIHA 129 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 AA GE+ L L R+ LTP+E +L+L+A+G NK IA + Sbjct: 130 AARGEVRLHPEAARRLVRDFRS-----PEMRESLTPKETAVLQLLARGQSNKDIAAEQGV 184 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E+TVK HV +L K+ L SR +AA++ + I Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALKYGI 217 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 266 bits (682), Expect = 3e-70, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 118/211 (55%), Gaps = 1/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 I+L DDH + R G+++L+ M D+ V+GEA +G+ +E+ +L PD++L D++MP Sbjct: 2 RKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDGDATVEMVSALKPDVLLFDIHMPK 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G++ + L+ S R V + + ++ + G D Y+LK +LL A+ Sbjct: 62 KDGIQVVKDLKAMGCSPRFVAITAFDDDDHITALSSVGIDAYVLKASGMAELLSAIRSVY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G + + L ++ R +++LTPRE ++L I+QGL N IAR++ ++E Sbjct: 122 RGHSYVDPKVAGKLLSTF-NRRREERDLLSRLTPREMEVLYWISQGLNNGEIARKMVLSE 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK HV H+LKK+ L R +AAV+ + + Sbjct: 181 KTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 266 bits (682), Expect = 4e-70, Method: Composition-based stats. Identities = 66/205 (32%), Positives = 117/205 (57%), Gaps = 4/205 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +L+ DDHP+ R GV +++ PD V+ EA +GE+ +++A +L PDL+L+D+ MP Sbjct: 2 KSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMACNLLPDLVLMDIQMPD 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +NG+E K+ K I++ ++ + V +A++ GA GY+LKD E ED+L+A+ A Sbjct: 62 LNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAIA 121 Query: 125 AGEMVLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 GE++ S + + T +LT RE ++L L+++G N +A L Sbjct: 122 KGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAETL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVE 205 ++ TV +V ++L K+++ R E Sbjct: 182 GLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH M G+++L+ A I + G A +G + + AE L PD+ L+D+ MP +N Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEAVAAAERLQPDVALMDMTMPRLN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ K+ S +++V S+ + +V +LK GA GY+LK+ ++L A+ A G Sbjct: 63 GIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGARGYVLKECSSQELCLAIQTVANG 122 Query: 127 EMVLSEALTPVLA-ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + L+ A+ L LR + L+ RE D+LKL+ +G K IA +L I+++ Sbjct: 123 QYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSISKN 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TV H +H+L K+ S E + +E Sbjct: 183 TVDTHRRHILDKLGCNSMAELTRYAIREG 211 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 265 bits (680), Expect = 5e-70, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 122/213 (57%), Gaps = 3/213 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 +P +LL DDH ++R G++ ++ P+I VVGEA+NG + ++LA L PD++L+D++MP Sbjct: 2 TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREAVKLAHELRPDVLLMDVSMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 MNGLE ++R+ +++ S+ ++ E V ++ GA GY+LKD+ +++ A+ Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPEMITAISSV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A+G S A+ P L + + LT RER +L IA+GLPNK +A+ L I+ Sbjct: 122 ASGGYYFSSAVGPTLVGTATSAPIEDP---YGLTDRERQVLTAIAKGLPNKEVAKSLGIS 178 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H ++ +K+ K+ + + Sbjct: 179 VRTVESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 7/213 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P + L+DDH ++R G+ ++ PDI VVGEA+NGE +++A + D+I++D+ MPG Sbjct: 2 SPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAANGESALQMASTWQADVIVMDVLMPG 61 Query: 65 -MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 ++G+ET +L+ I++ S + V+ AL+ GA Y+ K+ +PE LL+A+ A Sbjct: 62 GIDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAITYIEKESQPEQLLEAIRGA 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG+ VL+ AL + A T + + LT RER++LKL+A+GL N IA RL ++ Sbjct: 122 MAGKAVLAPALMQRILE------AQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVS 175 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E TVK HV +L+K+ L R +AA++ + + Sbjct: 176 EETVKTHVASILRKLGLAHRTQAAIYALRHGLV 208 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 265 bits (680), Expect = 6e-70, Method: Composition-based stats. Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DD M+R GV+ +++ P+I VV EA +G + I+L S PD++LLD+ MP M+ Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREAIDLVLSHRPDVVLLDIRMPRMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GL + +LR + +V+ + ++ + AL GA G+LLK +P +LL +H A G Sbjct: 62 GLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGAGGFLLKSGDPRELLAGIHAVAEG 121 Query: 127 EMVLSEALTPVLAASLRANRAT----TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 LS + + L R T V LTPRERD+L L+ +GL N IARRL + Sbjct: 122 AAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIARRLYL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E TVK HV +L ++ ++RV+AA+ H+ + Sbjct: 182 VEGTVKAHVSAILTRLGARNRVQAAILAHEAGLL 215 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 265 bits (679), Expect = 7e-70, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 120/215 (55%), Gaps = 7/215 (3%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + +++ DDHP++R G+ ++ + DI VVGEA +G Q ++LA +L PD+++ DL Sbjct: 24 PERPTVRVVVADDHPVVRAGIVGMLGVESDIEVVGEAEDGRQAVDLARTLSPDVVITDLR 83 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP ++G+ ++ + R+VV + + +++ A++ GA GYLLKD +L+ + Sbjct: 84 MPVLDGVGATREIVALPGTVRVVVLTTYETDGEILRAVEAGATGYLLKDTPRAELVAGIR 143 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 +AA G+ VL+ ++ L + + + ++LTPRE ++L+ +A+GL N + L Sbjct: 144 EAARGQTVLTPSVATRLVSQVGSRA-------DRLTPREVEVLRAVARGLSNAAVGHELF 196 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E+TVK H+ K+ + R A + Sbjct: 197 ISETTVKTHLIRAFGKLGVNDRTHAVTVATDRGLL 231 >UniRef50_A9AZR3 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AZR3_HERA2 Length = 213 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 74/214 (34%), Positives = 116/214 (54%), Gaps = 6/214 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N I+L+DDH ++R G++ L++ + +VGEA NG IELA + P +IL+DL Sbjct: 1 MTN--IIRIMLVDDHAIVREGLRTLLAEDTEFLIVGEAQNGADAIELAAVVRPHVILMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP ++G++ L+ S RI+V + + ++ V A++ GA GYLLK++ +L A+ Sbjct: 59 VMPNVDGIQATQALQSLMPSSRIIVLTSFSDDQWVSKAIQAGASGYLLKNVLKAELFLAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G+ L L + LT RER +L I GL NK IAR L Sbjct: 119 RTVANGQPFLHAEAQRTLMRQ----STAPPSLLPSLTERERSVLDGIVGGLSNKEIARSL 174 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +TE TVK +V +L K+ + R +AA++ + Sbjct: 175 HLTEGTVKGYVSTILTKLAVADRTQAALYAIKHG 208 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 265 bits (679), Expect = 8e-70, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 124/212 (58%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DD P++R ++ L + DI VVGEASNGE+ ++ L P +IL+D+NMP M+ Sbjct: 9 IQLLLVDDDPLVRRSLRMLFELH-DINVVGEASNGEEALKAIARLKPTMILMDVNMPKMD 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ L ++ ++++ +V N E VV A++ G Y+LKD PE L++ + A G Sbjct: 68 GIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDGCSAYVLKDSPPEQLIEVVESVAEG 127 Query: 127 EMVLSEALTPVLAASLRA--NRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + ++ L +L R +++ LT RE+++L+LI GL NK IA +L+IT Sbjct: 128 RYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGLSNKEIAGKLNITL 187 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV +L K+ + R +AAV QE + Sbjct: 188 RTVKAHVSSILMKLNVNDRTQAAVLAIQENLV 219 >UniRef50_C7QC31 Two component transcriptional regulator, LuxR family n=95 Tax=Actinobacteria (class) RepID=C7QC31_CATAD Length = 236 Score = 265 bits (679), Expect = 9e-70, Method: Composition-based stats. Identities = 67/220 (30%), Positives = 116/220 (52%), Gaps = 6/220 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + EP ++L DD ++R G++ +I AP + VVGEA+ G + +A D++L+D+ Sbjct: 9 AATEPTRVVLADDQDLVRAGLRLMIDRAPGLAVVGEAATGHDAVRIAREARADVVLMDIR 68 Query: 62 MPGMNGLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 MPG++GL ++ R+++ + ++ V AL+ GA G+L K P+ L+ A Sbjct: 69 MPGLDGLAATRRIAADDSLAGVRVLILTTFEVDDYVFEALRSGASGFLGKGARPDALIDA 128 Query: 120 LHQAAAGEMVLSEALTPVLAASLRA----NRATTERDVNQLTPRERDILKLIAQGLPNKM 175 + A G+ +LS + T L A + + LT RER++ L+A G+ N Sbjct: 129 IRTVARGDALLSPSATRGLIARFLSLQDTEPVHPSPLLTTLTDRERELTALVADGMSNTD 188 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 IAR+L ++ TVK HV H + K+ + R + V +Q + Sbjct: 189 IARQLTLSPLTVKTHVNHAMTKLGARDRAQLVVLAYQTGL 228 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 265 bits (678), Expect = 9e-70, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 2/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P IL+ DDH ++R G++ L+ + V A NG Q + LA PD++++D+ MP M Sbjct: 2 PPRILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAVKFKPDIVIMDITMPNM 60 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG +K+ + R++ S+ + GA Y+LKD +L A+ Sbjct: 61 NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAVGR 120 Query: 126 GEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ +S ++ LA S + T ++ +++PRER++L+LIA+G+ + IA RL ++ Sbjct: 121 GKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFVSI 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H ++++ K+ + S + QE + Sbjct: 181 KTVEAHRRNIMNKLMISSVAGLTRFAIQEGLV 212 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 65/195 (33%), Positives = 110/195 (56%), Gaps = 3/195 (1%) Query: 25 LISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIV 84 ++ PD+ +VGEA GE+ +EL ++L PD++++D+++P M+G+E ++E R++ Sbjct: 1 MLQSEPDLELVGEAGRGEEAVELTKALKPDVVIMDISLPDMSGIEATRLIKEAVPETRVI 60 Query: 85 VFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRA 144 ++ E V+ L+ GAD Y++K DL+ A+ G+ VL A+T + + Sbjct: 61 GLTMHEEEPFVLEFLRAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVS 120 Query: 145 NRATT---ERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLK 201 + LTPRER+IL LIA+GL N IARRL I+E TV+ H +ML K+ + Sbjct: 121 RPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIH 180 Query: 202 SRVEAAVWVHQERIF 216 R E + ++ + Sbjct: 181 DRTELVRYAIRQGLV 195 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 76/221 (34%), Positives = 127/221 (57%), Gaps = 10/221 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD------PDL 55 + E ++++DDH ++R G++ + PD+ +V EA++G++ ++L P + Sbjct: 6 TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65 Query: 56 ILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPED 115 +L+DL MP ++G+E + ++VV + + E V AL GA GY+LKD EPE+ Sbjct: 66 VLMDLQMPRLDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAAGYVLKDAEPEE 125 Query: 116 LLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKM 175 + A+ A GE+ L A+ +LA + + + V LT RERDIL L+ QGL N+ Sbjct: 126 VATAVRAAVKGEVHLDAAVARLLARRMASPQVG----VTSLTARERDILVLVGQGLSNRE 181 Query: 176 IARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 IA RL I+E T + HV ++L K++L SR +AA+ +E + Sbjct: 182 IADRLVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLV 222 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 78/210 (37%), Positives = 128/210 (60%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I++ DDH M+R G+K L+ + DI V+ EA NGE ++ ++ PD++LLD+NMP MN Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKVIAEAENGEDCLDKLKTFRPDVLLLDINMPKMN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L L+++ +++V +V N E ++ A+ G +GY+LKD E +L KA+ A G Sbjct: 63 GLEVLKALKDRKSKVKVLVLTVHNETEYLMKAVDIGINGYVLKDSESAELKKAIFTIADG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E + +L P L + + + E ++ LT RE ++LK +A G N+ IA+ + I+E T Sbjct: 123 ETYIQPSLIPALNSKMI-QKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMKISERT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ + KK+++ R +AAV+ + I Sbjct: 182 VKNHISSIFKKLEVTDRTQAAVFAIRNNII 211 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 71/210 (33%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL+DDH ++R G+K ++++ I VV EA+NG + I A+ L PD++++DL MP MN Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLPDVVVMDLTMPEMN 72 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + ++ R +V S+ V+ K GA GYLLKD E+L+ A+H A+G Sbjct: 73 GIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGATGYLLKDCAVEELVGAIHTVASG 132 Query: 127 EMVLSEALTPVLAASL-RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E L +T ++ + A + QL+ RER++L+LIA G K IA ++ Sbjct: 133 EPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGVSIK 192 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV V ++KK+ L + + + +E + Sbjct: 193 TVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_Q5WI37 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WI37_BACSK Length = 210 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 117/210 (55%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL +D M+R G+K +I DI V GEA +G + + L E+ D+ +LD+ MP M+ Sbjct: 2 IKVLLAEDQVMVRQGLKAMIETDEDIKVTGEADDGRKALRLCETHVFDVAILDIRMPEMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +R + +I++ + + + VV +LK G +GY+LK+ + E L++++ G Sbjct: 62 GIEAAKMMRLRYPKMKILMLTTFDDHQYVVESLKLGVNGYMLKNGDTESLIRSIKSTING 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L + + + +L N+ D LTPRER IL I +GL NK IA RL ++ T Sbjct: 122 GLSLEDQVAAKVVPTLLQNQEEPSID-PSLTPRERAILTCIGEGLNNKEIAERLGLSVGT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK H+ K+ L+ R + A++ + R+ Sbjct: 181 VKNQTSHIFDKLALRDRTQLAIYAIRHRLV 210 >UniRef50_A8ZMB6 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMB6_ACAM1 Length = 215 Score = 264 bits (677), Expect = 1e-69, Method: Composition-based stats. Identities = 77/212 (36%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL+DD ++R G+ L+ + D+ V G A+NG++ I+ A L P++IL+D+ MP +N Sbjct: 3 IQILLVDDQYLIREGIASLLELEEDLEVAGMAANGKEAIKQAIDLKPNIILMDIRMPELN 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E K+++ +I++ + + EE +V +L GA GYL+KD+ P+DL +A+ A AG Sbjct: 63 GVEATAKIKQSLPHCQIIMLTTFDDEELIVQSLLAGACGYLMKDIPPDDLGQAIKLADAG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKMIARRLDIT 183 L+ + L SL+ RA + LT RE ++LKL+A+G NK IA+ +++ Sbjct: 123 VFQLAPEVAGKLIGSLKTQRAGDAPKLPTDTPLTTRELEVLKLLAKGNTNKEIAKAFNLS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 E TVK HV ++L ++ L+ R +AAV+ + + Sbjct: 183 EGTVKNHVSNILMRLGLRDRTQAAVYAVEHGL 214 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 67/209 (32%), Positives = 114/209 (54%), Gaps = 3/209 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DDH ++R G++ ++ D VVGEA+ G + +L L P +ILLDL+MPG N Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQLVRELSPHVILLDLSMPGRN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE + +LR + RI+V ++ E+ VV A + GA GYL K+ +L++AL + AAG Sbjct: 62 GLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVAAG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +S A+ LA L+ + L+ RE ++ + I G IA L ++ T Sbjct: 122 GTYVSPAMAEKLALGLQE---KPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 V + +++K++L+S + + R+ Sbjct: 179 VSTYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_P94439 Uncharacterized transcriptional regulatory protein yfiK n=4 Tax=Bacillales RepID=YFIK_BACSU Length = 220 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 66/215 (30%), Positives = 117/215 (54%), Gaps = 7/215 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I++ DD ++R G+ L+ + ++ V+ A NG++ E A+ L+PD++L+D+ MP N Sbjct: 2 IKIIITDDQDIVREGLASLLQLREELDVIATARNGQEAFEKAKELEPDIVLMDIRMPVSN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + S ++++ + + AL+ GA GYLLKDM + ++KA+ +G Sbjct: 62 GVEGTKLITSSLPSVKVLMLTTFKDSALIAEALEEGASGYLLKDMSADTIVKAVMTVHSG 121 Query: 127 EMVLSEALTPVLAASLRANRA-------TTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 MVL LT + + + ++ LT RE ++L + GL NK IA + Sbjct: 122 GMVLPPELTAQMLNEWKREKQLKGINEIEKPNELLDLTEREIEVLAELGYGLNNKEIAEK 181 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 L ITE TVK HV +++ K+ ++ R +AA++ + Sbjct: 182 LYITEGTVKNHVSNIISKLAVRDRTQAAIYSVRYG 216 >UniRef50_D2Q2Q8 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D2Q2Q8_9ACTO Length = 216 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 69/214 (32%), Positives = 118/214 (55%), Gaps = 4/214 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++R G++ LI D+ VVGEAS+G + + LA PD++L+DL MP M Sbjct: 2 IRVLVVDDQDLVRAGLRLLIDNTDDLRVVGEASDGREALALAREHQPDVVLMDLQMPVMG 61 Query: 67 GLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ET +R L +VV + +H+ DVV A++ GA GYLLKD+ ++L A+ A Sbjct: 62 GVETTAAIRADPLLKDTPVVVLTTFDHDADVVDAVQAGASGYLLKDLAADELRGAIRTAV 121 Query: 125 AGEMVLSEALTPVLAASLRANRAT--TERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G ++ + ++ + + E + LT RE DIL + +GL N+ I + L + Sbjct: 122 TGGAPIAPKVAKLMMHRISRMPSRKVQEETLAGLTARELDILAHVGRGLSNEEIGQALFL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T + +V +L K+ ++ R + V H+ + Sbjct: 182 SPETARTYVSRLLAKLGVRDRSQLVVLAHKAGLV 215 >UniRef50_C0Z4M7 Two-component response regulator n=7 Tax=Bacillales RepID=C0Z4M7_BREBN Length = 235 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 68/234 (29%), Positives = 123/234 (52%), Gaps = 18/234 (7%) Query: 1 MSNQEP---ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLIL 57 M NQ ++L+DD M+R G+ +I M D+ V GEASNGE+ +++ + PD++L Sbjct: 1 MENQNKKETIRVVLVDDQTMIRQGLGYVIKMQKDMEVSGEASNGEEAVKIVGEIIPDVVL 60 Query: 58 LDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLL 117 +D+ MP M+G++ ++ S ++++ + + + +V ++ GA GY+LKD + +D+L Sbjct: 61 MDVQMPNMSGIDATREITRLHPSVKVLILTTFDTYDYIVDGIRAGAVGYMLKDSDSQDML 120 Query: 118 KALHQAAAGEMVLSEALTPVLAASLRANRATTERD---------------VNQLTPRERD 162 + +A GE + A A + + +QLT RERD Sbjct: 121 DLIRRAHQGEALFYTATAAKALAEVLQFQQKNYEPDSDADCDSTLPPLVMFDQLTDRERD 180 Query: 163 ILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +L+ ++ G N IA+ L I+ TVK H+ +L+KM ++ R +A + +I Sbjct: 181 VLEQLSYGKRNDQIAQHLLISGGTVKTHIHRILQKMGVEDRTQAVAKAIRYKIV 234 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 72/226 (31%), Positives = 128/226 (56%), Gaps = 12/226 (5%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S++ I++ DDHP+ R G+ +L+++ D VV +A +G Q +++ + +PD++LLDL Sbjct: 18 SSKPKIRIVVADDHPIFRDGLCRLLALEEDFEVVAQAQDGRQVLDVLQQHEPDILLLDLK 77 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MPG++GL TL +L+ R++V + S+ + + V A+K G G +LK E L+K++ Sbjct: 78 MPGLDGLATLQRLQIAKNKTRVIVLTASDDKNEFVQAMKLGTSGIVLKQTATELLIKSIR 137 Query: 122 QAAAGEMVLSEALTPVLAASL------------RANRATTERDVNQLTPRERDILKLIAQ 169 + AGE+ L T + T ER+ + L+ RER+I+ L+AQ Sbjct: 138 KVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVAQ 197 Query: 170 GLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 G NK +A ++ I+E TVK H+ ++ K+ + R+E A++ + Sbjct: 198 GFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLELALYAIHNNL 243 >UniRef50_D2B5Y0 Response regulator receiver protein n=14 Tax=Actinobacteria (class) RepID=D2B5Y0_STRRD Length = 227 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 76/223 (34%), Positives = 125/223 (56%), Gaps = 7/223 (3%) Query: 1 MSNQEPATI--LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 M+ EP T+ L++DD P++R G+ ++ APDI VV +A +G Q + L + PD++L+ Sbjct: 1 MTASEPWTVGVLIVDDDPLVRAGLVMMLGGAPDIRVVAQAGDGTQVLPLVDRHAPDVVLM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D+ MP M+GL + LR + + ++V + + ++ V+ AL+ GA G+LLKD P++++ Sbjct: 61 DIRMPVMDGLAATEVLRARPGAPEVIVLTTFDADDHVLRALRAGAAGFLLKDTPPDEIVT 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLR-----ANRATTERDVNQLTPRERDILKLIAQGLPN 173 A+ Q A G VLS +T L A + R + L RER++ + QG N Sbjct: 121 AVRQVARGYPVLSPVVTRRLIARVADSGHDRRRTRAGDRLALLNAREREVAVALGQGRSN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I L ++ TVK HV +L K+ L +RV+ A+ VH + Sbjct: 181 AEIGAVLHLSVPTVKTHVSGILTKLGLNNRVQIALLVHDAGLL 223 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 264 bits (676), Expect = 2e-69, Method: Composition-based stats. Identities = 67/216 (31%), Positives = 122/216 (56%), Gaps = 8/216 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I L+DDH +LR G+K ++S + GE+ + E+ ++ L+PDL++ D++MPG++ Sbjct: 6 TKIFLVDDHAILREGLKMILSGQ--FEICGESGDAEKALDQIGKLNPDLVITDISMPGLS 63 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + LR++ + R ++ S ++ E V L+ G +GY+LKD DLL+A+ G Sbjct: 64 GIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVHKG 123 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQ------LTPRERDILKLIAQGLPNKMIARRL 180 E LS +T + + E + + L+ RER+ILKL+A+G N+ I + L Sbjct: 124 ETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGKIL 183 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ +TVKVH +++KK+ L + ++ + + Sbjct: 184 GISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLI 219 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 263 bits (675), Expect = 2e-69, Method: Composition-based stats. Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 4/215 (1%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + +EP ILL DDH +LR G+ L+S D +VV EAS+GE+ +E A D+ LLDL+ Sbjct: 3 NKKEPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKAAKTPVDIALLDLS 62 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M GLE L +L+ + R+++ ++ + + V L+ GA+GYL KD +L +AL Sbjct: 63 MPHMGGLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALR 122 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 AAG L E +L L+ RER++L+LI G IA +L Sbjct: 123 TVAAGGRYLGEREAELLIDGALEEPEEP----AALSTREREVLELIVHGYSLSTIADKLY 178 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV + +L+K+ E + + I Sbjct: 179 LSIKTVSTYKTRLLQKLDCTQNSELVDYALRHNIL 213 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 263 bits (674), Expect = 3e-69, Method: Composition-based stats. Identities = 78/212 (36%), Positives = 117/212 (55%), Gaps = 4/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 IL+++DH ++R G++Q++S P+ V GEA++GEQ + LA SL PDL+L+DL +P M+ Sbjct: 2 TRILIVEDHALMRIGLRQVLSQTPEYEVAGEAADGEQALALARSLQPDLVLMDLGLPVMS 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDME--PEDLLKALHQAA 124 G E L+ + + R++ + + +E V AL GADGY LK LL A+ Sbjct: 62 GTEVTRILKREYPAMRVLALTSHDEDESVFGALAAGADGYCLKATAGIASRLLAAVASVR 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G L + + L N L+ RE ++LKLIA GL N I RRL I Sbjct: 122 DGAAWLDPDIADRVLRDLGRIPQAGAD--NPLSEREMEVLKLIADGLTNAEIGRRLYIAS 179 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VHV +++ K+ + RV+AAV +E Sbjct: 180 GTVRVHVSNIIAKLGVNDRVQAAVRALREGWI 211 >UniRef50_C6WIC9 Two component transcriptional regulator, LuxR family n=31 Tax=Actinobacteria (class) RepID=C6WIC9_ACTMD Length = 302 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 67/211 (31%), Positives = 121/211 (57%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD +LR + L+ APD+ V+G A +GE+ + +A + PD++L+D+ MP ++ Sbjct: 71 IGVVIADDQALLRGSFEVLVGSAPDLRVLGTAEDGERAVAVAARVRPDVVLMDVRMPNVD 130 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++ R+++ + + +E V AL+ GA G+LLKD P DLL A+ A+G Sbjct: 131 GIEATARICAAQAGVRVLILTTFDLDEYVYAALRAGASGFLLKDTPPADLLAAIRVVASG 190 Query: 127 EMVLSEALTPVLAASLRANRATTE-RDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E +LS ++T L A A ++ +T RER++L+L+A+GL N I L ++ Sbjct: 191 EALLSPSVTRRLITEFAARPAARPLPALDAVTAREREVLRLVAEGLSNTEITEALHVSRG 250 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T+K HV +L K+ + R + + ++ + Sbjct: 251 TLKTHVGRLLHKLGARDRAQLVIAAYESGLV 281 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 263 bits (673), Expect = 3e-69, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 113/212 (53%), Gaps = 2/212 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD P +R ++ L+ D+ VVG A +G Q I+L L P +IL+DL+M M+ Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNVVGLAEDGNQAIDLCGRLQPHVILMDLDMQHMD 442 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E K++++ R+++F+ E + +L+ GADG+LLK +E +L + G Sbjct: 443 GVEATKKIKQQWPHIRVLIFTTFQDTEQALESLRNGADGFLLKSIETLELANTIRLIHKG 502 Query: 127 EMVLSEALTPVLAASLRANRATTERD--VNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 ++ + ++ + T + +LT RE +IL+L+A+GL IA RL ++ Sbjct: 503 GTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIASRLYLSN 562 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ + K+ ++++ EA + I Sbjct: 563 GTVRNYASTAYTKLGVRNKEEAVQKALEIGII 594 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 263 bits (673), Expect = 4e-69, Method: Composition-based stats. Identities = 76/216 (35%), Positives = 120/216 (55%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M + IL+ DDH ++R G+ L++ PD+ VV EA++G Q +EL +PDL L+DL Sbjct: 1 MKKEGKIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQALELFAKCNPDLALMDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP +G++ ++R + + +++ + + +ED+ AL+ GA GY+LK E L+ AL Sbjct: 61 RMPVKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAG+ + + + LA QL+PRE +L +A+GL NK IA L Sbjct: 121 RAVAAGQRWIPKEVANRLALR---------NSFEQLSPREVQVLSELARGLANKEIADVL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +ITE T K H+K +L K+++ R EA Q I Sbjct: 172 NITEHTTKDHLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 65/225 (28%), Positives = 121/225 (53%), Gaps = 10/225 (4%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S E ++++DDH +R ++ ++ D+ VVG A +G Q +EL E L+PDL+L+DL Sbjct: 378 SADEIIRLVIVDDHSFIRESLRSILEGQRDLRVVGLAEDGAQAVELCEELEPDLVLMDLE 437 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP M+G+ +++EK RI+V S E ++ GADGYLLK +E +L + + Sbjct: 438 MPNMDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIR 497 Query: 122 QAAAGEMVLSEALTPVLAAS----------LRANRATTERDVNQLTPRERDILKLIAQGL 171 G ++++ L + + ++ + + LT RE++IL+++AQG+ Sbjct: 498 LVHRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGM 557 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K IA +L +++ TV+ + + K+ +++R +A E + Sbjct: 558 RYKTIASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 262 bits (672), Expect = 4e-69, Method: Composition-based stats. Identities = 65/218 (29%), Positives = 113/218 (51%), Gaps = 2/218 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + ILL DDH ++R G++ L+ + D + EAS+G ++ AE L PD+++LDL Sbjct: 1 MTTELKTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAEDLAPDIVILDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MP +NGLE ++ R+++ ++ E+ V AL G GY+LK DL A+ Sbjct: 61 SMPELNGLEAARRIAAHCPRSRMLMLTMHETEQFVREALAAGVRGYILKTDAGRDLANAV 120 Query: 121 HQAAAGEMVLSEALTPVL--AASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 GE + L + A R + LTPRER+IL+L+A+G N+ + + Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L+I+ T + H ++ K+ + S + + + + Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLI 218 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 120/210 (57%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +LL DDH ++R G++++I + DI V+ EASNG++ I+L PD+ ++D++MPG++ Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCPDVAVVDISMPGID 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE + +L + +++ ++ E+ VV A++ GA GY+ K PE L+ A+ + +G Sbjct: 62 GLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAPEQLVTAIRKLHSG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L+E +LA + + + ++ L+ RE +L+ +A G N+ IA I+ T Sbjct: 122 SRFLTEEAAELLALRV-SRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISVKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V + +LKK+ L++ + + + Q + Sbjct: 181 VDTYRARLLKKLNLRNNADISRFAIQNNLI 210 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 262 bits (672), Expect = 5e-69, Method: Composition-based stats. Identities = 77/209 (36%), Positives = 125/209 (59%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L+ DDHPM R ++ L+ P V+GEA NGE+ L + PDL+L+D+NMP +G Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFLLCGQIQPDLVLMDINMPKWSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE ++++ ++V+ SVS+ D++TA++ GA GYLLK++EP+D + LH + Sbjct: 65 LEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINYLHALLGED 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L+ + L R AT E LTPRER+I+ + G N+ I+ L I E+TV Sbjct: 125 SELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALIIAENTV 184 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K H+K++L+K++L +RV+ A + + + Sbjct: 185 KNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_Q0B0G6 Response regulator receiver protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0B0G6_SYNWW Length = 213 Score = 262 bits (671), Expect = 7e-69, Method: Composition-based stats. Identities = 69/212 (32%), Positives = 123/212 (58%), Gaps = 3/212 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + A +++ DDH ++R G+++L+ + +I V+ E +G+ I +A PD+I++D+NMPG Sbjct: 2 DKARVVIADDHVLVREGLRKLLELDSNIKVIDEVGDGQGAINIARKEKPDIIIMDVNMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ ++ + S RI+ +V EE VV +K GA Y+LKD+ +L+ +H+ Sbjct: 62 TDGIVATRVIKRELPSVRIIALTVYEGEE-VVDMVKAGASAYILKDVAGSELVDTIHRVM 120 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE+V+ + L LR + +LT RE+D+L L+ +G NK +A + I+E Sbjct: 121 NGEVVIYPRVANRLVRELRQSENRKSEI--RLTKREKDVLTLLVKGNTNKEMAEVMFISE 178 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+ + +K+ +K R AA++ + RI Sbjct: 179 KTVKNHLTSIFRKLGVKDRTHAAIYALKNRIV 210 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 261 bits (670), Expect = 7e-69, Method: Composition-based stats. Identities = 66/209 (31%), Positives = 123/209 (58%), Gaps = 1/209 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E + ++DDH ++R G++Q ++ DI VVGEA + + +L P + +LD +P Sbjct: 34 EKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPALHPHVAVLDGRLPD 93 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G++ ++R ++ + + +E + +A+ GA GY+LK++ DL+ A+ A Sbjct: 94 GSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAAGYVLKEIRGNDLVGAIRTVA 153 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 +G+ +L+ ++T + LR + + + L RER+IL+LIA GL N+ I RL ++E Sbjct: 154 SGQSLLAPSVTRRVLERLRDGPSE-DPAMATLNQREREILQLIADGLTNRQIGTRLGLSE 212 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 TVK +V +L+K+ L SR +AAV++ ++ Sbjct: 213 KTVKNYVSSILEKLGLASRTQAAVYLMKQ 241 >UniRef50_D1BXU0 Two component transcriptional regulator, LuxR family n=3 Tax=Actinomycetales RepID=D1BXU0_XYLCX Length = 223 Score = 261 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 77/216 (35%), Positives = 125/216 (57%), Gaps = 6/216 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD P++R G+ L+++ PD+ VVGEA +G + +A+ L PD+ LD+ MPG++ Sbjct: 2 IRVLIADDQPLVRAGLTALVNLEPDLEVVGEAGDGVTALAMAQDLRPDIACLDIRMPGLD 61 Query: 67 GLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ +L + ++V + + ++ V AL+ G G+LLKD EPE + A+ Q A Sbjct: 62 GIAVARRLCGPDVEAPIPVLVLTTFDLDDYVFGALEAGVSGFLLKDAEPETITTAIRQVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRL 180 AG + + LT + R+ ++ LT RE++IL L+AQG+ N IAR L Sbjct: 122 AGNGTIDQTLTRRILREFVQRRSLQPVSTSRGNGVLTSREQEILLLLAQGMSNDEIARTL 181 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + STVK H+ ML K+ ++SR++A VW +Q R Sbjct: 182 VVELSTVKSHLARMLPKLGVRSRLQAVVWAYQNRFV 217 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 261 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 1/211 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E ++LIDDH + R G+K+L+ M PD ++ GEAS+G +G+ L + PD++LLD+ MP Sbjct: 2 EKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLALIKRSRPDVVLLDIGMPN 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G+ + +LR + + V + N E + G G++LK +LL A+ A Sbjct: 62 LDGIGLIRELRSTEQNTKFVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAIRSVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G+ + + +L + + + LT RE+++L +AQGL N I+ +++++E Sbjct: 122 RGQCYVDPKVAGLLLGAF-HKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMNLSE 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK HV H+LKK+ L+ R +AA+ + I Sbjct: 181 KTVKNHVSHILKKLDLRDRTQAAILAWRVGI 211 >UniRef50_B1L0K3 DNA-binding response regulator, LuxR family n=22 Tax=Bacteria RepID=B1L0K3_CLOBM Length = 217 Score = 261 bits (670), Expect = 8e-69, Method: Composition-based stats. Identities = 63/215 (29%), Positives = 118/215 (54%), Gaps = 3/215 (1%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 I+++DD ++R G+K ++S DI VVG A +G + + L + D ++L+D+ MP Sbjct: 2 NKTNIIVVDDEKLIREGLKIILSTYNDIEVVGLAGDGREALSLCKEKDVQVVLMDIRMPN 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ ++E+ +I++ + N +E + ALK GA GYLLKD E + + + Sbjct: 62 CDGVLGTRIIKEQFPHIKILILTTFNDKEYIHEALKFGASGYLLKDSSNELIYEGIKACV 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVN---QLTPRERDILKLIAQGLPNKMIARRLD 181 G +V+ + + + + + D+N LT RE +I++ IA GL NK IA ++ Sbjct: 122 KGNVVVHPDVANNIILNTTYEKELNDDDINLKYNLTEREINIIRQIANGLSNKEIAEKIY 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++E T+K ++ +L K+ L+ R + A++ + I Sbjct: 182 LSEGTIKNNISTILSKLDLRDRTQIAIFAFKNNIV 216 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 261 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+++ + L DDHP++ G++ L++ P+I +VGEA++G + + + + DPD+ ++D+ Sbjct: 1 MTDR--IRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADPDVAVVDV 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG+NGLE +++ R++V +V V LK GA GYLLK EDLL+A+ Sbjct: 59 SMPGLNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAV 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRA--TTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AAG + L ++ A TE L+PRE D+L+LIAQG NK IAR Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R D++ +++ + +K+ L++R E + Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHGWL 216 >UniRef50_C7Q058 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7Q058_CATAD Length = 258 Score = 261 bits (670), Expect = 9e-69, Method: Composition-based stats. Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 38/248 (15%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DD ++R G+ ++ AP VVGEA +G + + +A +PD++L+D+ MP M+ Sbjct: 2 VKVLIVDDQVLIRAGMAAILRAAPGYEVVGEACDGVEAVTMAALTEPDVVLMDIRMPDMD 61 Query: 67 GLETLDKLREKSLS--GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G+ + RI++ + + ++ V AL+ GADG++LKD PE LL AL A Sbjct: 62 GIAATRAILGSGRENLPRILILTTFDMDQYVYEALRAGADGFVLKDTPPERLLAALKAVA 121 Query: 125 AGEMVLSEALTPVLAASLR------------------------------------ANRAT 148 G+ + S +T L + + Sbjct: 122 DGDTLFSSTVTRRLVQAYVTATGLDGEPQGPGPGPGPGPVATPAPGLVPRSRRPDGPSSA 181 Query: 149 TERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAV 208 + LT RE D+L+L+A GL N IA RL ++E TVK H+ + K+ L SR +A V Sbjct: 182 ERAALAALTTRETDVLRLVATGLSNGEIAERLVVSEGTVKTHLNRAMAKLNLSSRAQAVV 241 Query: 209 WVHQERIF 216 ++ + Sbjct: 242 LAYESGLV 249 >UniRef50_D2PZY5 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D2PZY5_9ACTO Length = 252 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 71/231 (30%), Positives = 126/231 (54%), Gaps = 21/231 (9%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DD ++RTG+ ++ PD+T V +A +GE+ + L + DPD++L+D+ MP M+ Sbjct: 11 IRVLVADDQGVIRTGLAMILDHEPDLTTVAQAGDGEEALRLIDRFDPDVVLMDIRMPVMD 70 Query: 67 GLETLDKLREKS-----LSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 GL +++ + ++V + + E V++A++ GA G+LLKD +P+ L+ A+ Sbjct: 71 GLVATERITRANQEAGRSRPAVLVLTTFDDEAYVLSAVRAGASGFLLKDTDPDLLVAAVR 130 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERD----------------VNQLTPRERDILK 165 G+ ++ A T VL D + QL+ RERD+L Sbjct: 131 AVHRGDSLVDPASTRVLLERCVELERQVGADPVAAAPHAADGRWTGLLAQLSERERDVLV 190 Query: 166 LIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +A+GL N+ +A +L ++E+TVK HV +L K+ L SRV+A V ++ + Sbjct: 191 WMARGLSNRDLANKLFVSETTVKTHVSSVLSKLGLSSRVQAVVVAYEAGVV 241 >UniRef50_C4RJ91 Two-component system response regulator n=2 Tax=Actinomycetales RepID=C4RJ91_9ACTO Length = 232 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 75/219 (34%), Positives = 127/219 (57%), Gaps = 9/219 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 L++DD ++R G++ L+ APDI VVGEA++G + L E L PD++L+D+ MP ++ Sbjct: 2 IRALVVDDQGLVRAGIRVLLDTAPDIEVVGEAADGHNAVRLVERLRPDVVLMDIRMPRVD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L + +++ + ++ V AL GA GYL+KD EP D+L A+ +AA G Sbjct: 62 GIEATRRLLAAAPLTNVLILTTFADDDSVYGALSAGAVGYLVKDGEPADMLDAVRRAARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERD---------VNQLTPRERDILKLIAQGLPNKMIA 177 E +L+ ++ + R + A + LT RERD+L L+ GL N IA Sbjct: 122 EPLLAPSVLARVVDRARRSHAADRNGDIEQPDTAVLAALTARERDVLSLVGVGLSNAEIA 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R L++ +TVK H+ +L+K+ +++RV+A + H+ + Sbjct: 182 RDLNVGVTTVKTHIVALLEKLGIRNRVQAGILAHRLGLV 220 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 261 bits (669), Expect = 1e-68, Method: Composition-based stats. Identities = 68/211 (32%), Positives = 127/211 (60%), Gaps = 1/211 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P +L++DDH +LR G+K L+S D+ VVGEA+ G + + L SL PD+++LD +P + Sbjct: 2 PIRVLIVDDHELLREGLKSLLSREEDMEVVGEAAGGREAVALCRSLRPDVVVLDARLPDV 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E +L+E+ +++ + + + V+ A++ GA GY++KD+ DL +++ A Sbjct: 62 DGVEVCRQLQEEMPEVAVLMLTTFSDSDLVLGAVRAGARGYVVKDVLGMDLKRSIRAVAR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE+ + + L +R+ A E + L ++ I++L+AQG N+ IA R+ ++E Sbjct: 122 GEVAMDPKVVGYLMQQMRSPSADKEERIP-LNRQQLAIIRLVAQGYTNREIAERMFLSEK 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK ++ +++M +K+RVEAA+ + Sbjct: 181 TVKGYLAEAMRRMGVKNRVEAAMVASKNGWI 211 >UniRef50_B2A7N5 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=B2A7N5_NATTJ Length = 232 Score = 261 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 69/230 (30%), Positives = 125/230 (54%), Gaps = 20/230 (8%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +++ DD +L +K +I + D+ VV +SNGE+ +E++E L PD+IL+D+ MP Sbjct: 2 SKIKVMIADDQTILADSLKTIIDLEDDMEVVAVSSNGEETLEISEKLLPDIILMDIRMPK 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E KL+EK +I++ + +H+E +V AL GA GYLLKD++ + L+ ++ A Sbjct: 62 MDGVECTKKLKEKYPEIKIIILTTFDHDEYIVDALSYGASGYLLKDIDGDKLISSIRDAY 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDV--------------------NQLTPRERDIL 164 ++++ ++ L + + D +LT RE +I Sbjct: 122 NDKLLIPTSIAAKLIGKIDNRKQQPTDDHKDEPLKSQDRKESQKEINLYEELTQREIEIA 181 Query: 165 KLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +L+ GL NK IA +L IT+ TVK ++ ++ K+ +K R A +++ + Sbjct: 182 QLMVAGLSNKKIAEKLFITQGTVKNYITNIYSKLGVKERTSAVLYLQKLG 231 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 60/212 (28%), Positives = 114/212 (53%), Gaps = 2/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 ++L++DDH +L G+ L++ D+ V G+ ++ ++ + PD++LLDL++P Sbjct: 2 TISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCPDVVLLDLSLPDK 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 G E + +L+E S R++ ++ E ++ G DGY+LK ++L+ A+ Sbjct: 62 QGHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSVYQ 120 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVN-QLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE+++ + T +L R + + N L+ RE+++L+LIA G NK IA +L I+ Sbjct: 121 GEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYISI 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H+ + +K+ L R E + + I Sbjct: 181 KTVETHIARIKEKLGLNRRSELVRYAMRNNII 212 >UniRef50_D1BUI8 Two component transcriptional regulator, LuxR family n=22 Tax=Actinomycetales RepID=D1BUI8_XYLCX Length = 219 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 67/214 (31%), Positives = 117/214 (54%), Gaps = 1/214 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M++ +P + L+DDH ++R GV L+ D+ VVGEA + + +L PD+++LD+ Sbjct: 1 MADMDPVRVFLVDDHEVVRRGVADLLEAESDLEVVGEAGTAAEALVRVPALAPDVVVLDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P +G+ +LR + ++ + + +E + A+ GA GY+LK + DL+ A+ Sbjct: 61 RLPDGDGVAVCRELRATT-DVACLMLTSFDDDEALFDAIIAGAAGYVLKQVRGTDLVHAI 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 AAG +L + A +RA + + LTP+E+ IL LI QG+ N+ I L Sbjct: 120 RTVAAGGSMLDPHAAERVMARMRAQARHDDDPLASLTPQEQRILSLIGQGMTNRQIGAEL 179 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 + E TVK +V ++L K+ ++ RV+ AV + Sbjct: 180 FLAEKTVKNYVSNLLAKLGMERRVQVAVLATKLG 213 >UniRef50_A6TVR4 Two component transcriptional regulator, LuxR family n=5 Tax=Firmicutes RepID=A6TVR4_ALKMQ Length = 208 Score = 260 bits (667), Expect = 2e-68, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 121/205 (59%), Gaps = 1/205 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DD ++R +K LI + D TVVG ASNG++ E + PDLIL+D+ MP M+G Sbjct: 2 KVLIVDDDALIRDSLKILIDLEADFTVVGTASNGQEAFEFCKEYAPDLILMDIRMPIMDG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + ++E S RI++ + ++ + ALK GA GY+LK + ++++L + G Sbjct: 62 VLATKMIKESFGSIRIIILTTFKDDQYIKEALKNGAQGYILKSQSADSIIESLRTVSKGN 121 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +V + VL + L+ + D+ QLT RE +I+K + +GL N+ I+ L ++E TV Sbjct: 122 VVFETEIASVLTSMLKEEKEKHHLDL-QLTEREHEIIKWVGEGLSNREISAALYLSEGTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQ 212 + +V +L+K+ ++ R + A++ + Sbjct: 181 RNYVTQLLEKLNVRDRTQLAIFYLK 205 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 9/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +LL+DDH ++R+G+ L++ D VV EA + EQ + PD+ L+D+ Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEADDAEQAVAHYRQHRPDVTLMDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MPG +G+E L ++R + R+++ + + +EDV AL+ GA GYLLK + +L A+ Sbjct: 61 RMPGASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + AGE + ++L R ++L+PRE + L L+A+G N+ I L Sbjct: 121 RKVHAGERCVPQSL---------ETRCKNGALRSRLSPREVETLDLLARGFSNREIGSAL 171 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +TE T K HV+ +L K++ R EA ++ + Sbjct: 172 GVTERTAKAHVQAILVKLEAADRAEAVDAAYKRGLL 207 >UniRef50_C5C8Q1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Micrococcus luteus NCTC 2665 RepID=C5C8Q1_MICLC Length = 227 Score = 260 bits (666), Expect = 2e-68, Method: Composition-based stats. Identities = 74/224 (33%), Positives = 128/224 (57%), Gaps = 10/224 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS + IL+ DD P++ ++ L+ AP +T VG +NG + +E +++PD++L+D+ Sbjct: 1 MSEE--LRILIADDQPLMSGALRVLVGSAPGMTCVGVVANGVEAVEACAAIEPDVVLMDM 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 MP M+G+E ++++ + R++ + E+ +V AL+ GA GYLLKD EP +L A+ Sbjct: 59 QMPLMDGVEATRRIKDTHPAIRVLAITTFTSEDYLVPALRAGAGGYLLKDAEPPAILGAI 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRA--------TTERDVNQLTPRERDILKLIAQGLP 172 GE VLS A+ L AS+ +R D + LT RE +L+L+A+G Sbjct: 119 QAVHRGESVLSPAVAAKLLASIERDRPTVGPTSVQPGSPDGSDLTERELGVLRLLARGQS 178 Query: 173 NKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 N IA L ++ESTVK ++ ++ K++++ RV+ + Q + Sbjct: 179 NPEIAANLFVSESTVKANLTRIMAKLEVRDRVQLIIRAAQLGLV 222 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 61/215 (28%), Positives = 120/215 (55%), Gaps = 4/215 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P + + DDH + R G+ ++ + +I VV A NG++ I+ ++ PD+IL+DL MP M Sbjct: 2 PVKVAIADDHVLFRKGLVTILELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMPVM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++ K +++V S+ + E+ ++ L+ GA+GYLLK+ +P++L+ A+ A Sbjct: 62 DGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVMA 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDV----NQLTPRERDILKLIAQGLPNKMIARRLD 181 + + ++ V+ L + + +LT RE+++L+LI + L +A +L Sbjct: 122 KDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKLF 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H K++L+K K+ V+ + + Sbjct: 182 ISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELV 216 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 70/225 (31%), Positives = 114/225 (50%), Gaps = 13/225 (5%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +L++DDHP+ R GV+ +S DI ++GE S+ E+G+ L +PD++L DLN+P Sbjct: 3 ATVKVLMVDDHPLFRQGVRWALSSERDIKIIGEGSSAEEGLVLISEHEPDVVLTDLNLPN 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+GLE +R + + +V+ SV +E AL+ GA Y K++ P+ L L + A Sbjct: 63 MDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRVA 122 Query: 125 AGEMVL------SEALTPVLAASLR-------ANRATTERDVNQLTPRERDILKLIAQGL 171 GE V+ + + R A + L+ RE ++L+ IA G Sbjct: 123 RGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASGA 182 Query: 172 PNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 NK IA L I+ TVK H+ +L+K+ L R +A ++ + Sbjct: 183 TNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWI 227 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 71/214 (33%), Positives = 114/214 (53%), Gaps = 7/214 (3%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 +L++DDH + R G ++++ D+ VVG+A++GE + + L P ++L+D+ + Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASGEDALAMVNRLHPRVVLMDIRL 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 PGMNG+E ++RE+ R+++ + + EE V A GA GYL K +L++A+ Sbjct: 62 PGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAAGYLSKTAPGRELVEAVRA 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 A G VL L L A N LT RER +L+L+A+G+ NK IA RL I Sbjct: 122 VAGGNSVLQPTLMAALL-------AKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGI 174 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + TV+ H + K+ + SR EA V + Sbjct: 175 SARTVERHCDRIYGKLGVTSRTEAVVRAISANLL 208 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 260 bits (666), Expect = 3e-68, Method: Composition-based stats. Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 2/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P I+L+DDH ++R GV+ ++ + VVGEA NG ++L + PD++L+D+ +PGM Sbjct: 2 PFDIVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L S ++++ S+ + E VV+A++ GA ++LK +LL AL A Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVAR 121 Query: 126 GEMVLSEALTPVLAASLRAN--RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 G LS ++ L ++ + L+PRE +L+L+A+G +K IA LD+ Sbjct: 122 GGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLG 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ + K M+KK+ + + I Sbjct: 182 LQTVRSYRKTMMKKLGVNNVAGLTQLALAAGI 213 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 72/213 (33%), Positives = 132/213 (61%), Gaps = 4/213 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 + ILL+DDHP+ R G+ L++ +V EA++G +G++LA PDL+LLD+ M Sbjct: 2 TESNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEGVKLARFHRPDLVLLDVEM 61 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNG E L ++ + +++ ++S +++ L+ GA GY+LK+ + + L++A+ Q Sbjct: 62 PVMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGARGYILKNADTDFLVEAIRQ 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 A AG+ +S + + ++ ++ LT RERD+L+ +A G+ NKMIARR+ + Sbjct: 122 AVAGQQTVSPE----MNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFL 177 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +E+TVK H++++ +K+ + +RV AAV+ + + Sbjct: 178 SENTVKAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 124/218 (56%), Gaps = 7/218 (3%) Query: 1 MSN--QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILL 58 MSN + P ++ ++DDHPM++ G+K +S DI +VG +G + A L PD+IL+ Sbjct: 1 MSNLKELPVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIELKPDVILM 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D++MP MNG++ + + E+ ++++ S+ ++ E V +A++ GA GYLLKD E++ Sbjct: 61 DISMPTMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAVGYLLKDTTSEEIYY 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ A G+ S ++ +L + + +LT RE+ +L +A+G +K IA+ Sbjct: 121 AIKAVANGKTHFSSSIAKLLIDN-----PVNTNESEKLTTREQVVLSYLAKGKTSKEIAK 175 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L+I+ TV+ H ++M K+ + S + + + I Sbjct: 176 ILNISFRTVEAHRRNMKTKLGIHSLAKLISYAVKHGII 213 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 260 bits (665), Expect = 3e-68, Method: Composition-based stats. Identities = 62/207 (29%), Positives = 118/207 (57%), Gaps = 3/207 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+DDH ++R G++ L+ + + V GEA + + + PD+ILLD +P + Sbjct: 5 IKVMLVDDHSVVRQGLRLLLELDDTMEVCGEAETLTGAVAVCAEVAPDVILLDFKLPDGD 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ L+ + +I++ + + V +K GADGYLLK++E E+L+ + G Sbjct: 65 GIIGCGNLKRQFPQVKIIILTAYADDHLVTETIKAGADGYLLKNVESEELINTIQAVHKG 124 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + VL ++T +L ++++ + E + LTP+E IL +I+ G NK IA + I++ T Sbjct: 125 QSVLDPSVTEILFDNIKSQQPKKEHN---LTPKEVQILDMISVGKANKEIAEIMKISDKT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 V+ +V ++L+K+ + +R EAA + + Sbjct: 182 VRNYVSNILQKLNVSNRTEAASYWMRN 208 >UniRef50_B4B0U5 Two component transcriptional regulator, LuxR family n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4B0U5_9CHRO Length = 224 Score = 259 bits (664), Expect = 4e-68, Method: Composition-based stats. Identities = 79/219 (36%), Positives = 131/219 (59%), Gaps = 5/219 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 P ILL+DDH ++R G+K L ++ PD V+GEA++G Q IEL E L PD+IL+D+++ Sbjct: 6 TLTPIRILLVDDHNLMRRGLKGLFALNPDYEVIGEATDGLQAIELQEQLKPDIILMDIDL 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ +++ + +I+ S +H+ V+ L GADGY LK++E E+LL + Sbjct: 66 PLLDGISATQRIKRDDTATKILALSAYDHDTQVLGMLASGADGYCLKNIEWEELLVIIRL 125 Query: 123 AAAGEMVLSEALTPVLAASLRANR-----ATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 + G + L + ++ L++ TT + V L+ RER ILKLIA+G NK IA Sbjct: 126 ISHGGVYLDPRIAHKVSHLLKSGSFAVETNTTPKAVTVLSERERLILKLIAEGFSNKKIA 185 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 +L ++ T+K +V+ +L K+ + RV+AA +E + Sbjct: 186 EQLFLSPGTIKSYVRMLLNKLSVDDRVQAAAKAVREGLI 224 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 120/211 (56%), Gaps = 7/211 (3%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 EP +L+ DDHP++R G+K + + PD++VV EA +G++ + L + +PD++LLDLNMP Sbjct: 2 SEPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEALALIAAHEPDVVLLDLNMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G +G + L +L +++V + V A+ GA G+L KD++P+ L +A+ Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A G+++ + + A V LT RER++L L+A G N+ IA++L + Sbjct: 122 ADGQVIFAREAVTAM-------TAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVA 174 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 E TVK H+ + +K+ + R +AA++ Sbjct: 175 EKTVKTHLSSLFRKLGVADRTQAALYAVTHG 205 >UniRef50_A8L345 Two component transcriptional regulator, LuxR family n=33 Tax=Bacteria RepID=A8L345_FRASN Length = 249 Score = 259 bits (663), Expect = 5e-68, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 119/212 (56%), Gaps = 4/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++RTG++ ++ P I VVG A +G + +ELA L PD+ L+D+ MP M+ Sbjct: 23 IRVVVADDQEIVRTGLRMILDAQPGIVVVGVAVDGRRAVELARRLRPDVCLIDIRMPVMD 82 Query: 67 GLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 G++ L + +VV + + +E V AL+ GA G+LLKD P+ L +A+H AA Sbjct: 83 GIQATLALAGPGVADPLAVVVITTFDLDEYVYAALRAGARGFLLKDAGPDLLAQAVHAAA 142 Query: 125 AGEMVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G+ +++ +T L A+ + V LT RE +L +A G N IA L I Sbjct: 143 CGDALIAPNVTARLLATFAGSGPAPVPAQPVEALTDREEQVLATVAGGRTNSEIAADLHI 202 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 + STVK H+ ++ K+ ++RVE A+W +Q Sbjct: 203 SLSTVKTHIASLMAKLGARNRVEIALWAYQTG 234 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 6/210 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 E +L++DDHP++R ++ L+ D VVG A +GEQ IEL L P L+L+D++M Sbjct: 354 KDEVIRLLVVDDHPVIRESLRTLLEEQQDFQVVGTAEDGEQAIELCRQLRPQLVLMDVDM 413 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ ++E RI++ + + + AL+ G DGYLLK M+P +L + + Sbjct: 414 PIVDGISASRTIKESWPHIRILILTTFEDTKQALEALRSGVDGYLLKSMQPLELAETIRT 473 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTER------DVNQLTPRERDILKLIAQGLPNKMI 176 G ++ + ++ L A L A+ + + LTPRE +IL+ +++GL K I Sbjct: 474 VHRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYKSI 533 Query: 177 ARRLDITESTVKVHVKHMLKKMKLKSRVEA 206 A +++ TV+ + K+ +++R EA Sbjct: 534 ASNFYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 115/215 (53%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +L+ DD ++R+ + +I + PD+ +VG +GE + A ++ D+ LLD+ Sbjct: 1 MAADDVIRVLVADDQELMRSALGTVIDVQPDMRLVGSVPSGEDAVREALAVSVDVALLDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 M M+G+E ++R R+++ + + +E + ++ GA G+L KD D+ A+ Sbjct: 61 RMARMDGIEACAEIRRHRPDTRVLMLTTFDLDEYLFRSVAAGASGFLTKDTPGADVAGAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + +G V+S T L + L+PRERD+L L+A+G N IAR L Sbjct: 121 REVHSGRSVVSPRATRALIDRIARAAPDAAAVAADLSPRERDVLALLARGFSNAEIAREL 180 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + ESTVK HV + +K+ ++ R+ VW ++ I Sbjct: 181 FVAESTVKTHVSSLTRKVGVRDRLHVVVWAYRNGI 215 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 259 bits (663), Expect = 6e-68, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 115/210 (54%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 I + DDH +LR G+++++S + I VVGEASNG + +E+ + PD++LLD+ MP + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAPDVLLLDITMPVKD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +++ +I++ S+ E+ + L+ GA+G++ K E+LLKA+ G Sbjct: 62 GIEATADILALNVNTKILILSMHADEQYALRTLRAGANGFISKGARLEELLKAITDVHEG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + L + + A A V L+ RE ++ +AQG+ N+ IA L I+ T Sbjct: 122 QRYLPDKIATSFAERHIRPDAEKP-LVETLSKREFQVMTHLAQGMTNREIAGVLQISVKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V H H+LKK++L++ + + Q Sbjct: 181 VDTHRSHVLKKLELRNNSDITRFAIQHGYI 210 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 258 bits (662), Expect = 7e-68, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 118/216 (54%), Gaps = 10/216 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS ILL+DDH +LR G+ L++ + V+G+A +G I+L +L PD+++ DL Sbjct: 1 MSAM-TIRILLVDDHAILREGLAALLNGVDGMQVIGQAGDGATAIDLYRNLLPDVVICDL 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 M M+G E +R + + R+++ + + +E+V L+ GA YLLKD+EP L+ + Sbjct: 60 RMVPMDGTEVTSTIRAEFPAARVILLTTYDTDEEVFRGLRAGASSYLLKDVEPAQLIDTV 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 H AG + ++ LA + + + LT R+ ++L+ +A+G N IA L Sbjct: 120 HAVYAGRKAIDPSIAAKLAEHVAS---------DALTARQLEVLRSLAEGRSNIEIANTL 170 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+E TVK H+K +L+K+ + R +A + + Sbjct: 171 YISEGTVKAHIKAILQKLGARDRTQAVTIGIKRGLI 206 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 258 bits (662), Expect = 8e-68, Method: Composition-based stats. Identities = 73/209 (34%), Positives = 115/209 (55%), Gaps = 8/209 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM-PGM 65 +LL DDH ++R G++ L+ DI VVGEA+ + + L + DL+L+DL PG Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEVVGEAATADAAVALCATTPVDLVLMDLRFGPGT 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G++ LR ++V + + + D++ A+ GA GYLLKD P +LL A+ A+A Sbjct: 62 SGVDATRNLRSLPNPPHVLVVTNYDTDADILDAVAAGAAGYLLKDTPPPELLAAVRAASA 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G+ VLS A+ L +R R L+PRE +L L+A G N+ I + L ++E+ Sbjct: 122 GDSVLSPAVASKLMTRVR-------RPATSLSPREIQVLTLVAAGRSNREIGKELFLSET 174 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK H+ H+ K+ +KSR A + Sbjct: 175 TVKSHLVHIFGKLGVKSRTSANRAGPRAG 203 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 258 bits (661), Expect = 9e-68, Method: Composition-based stats. Identities = 76/210 (36%), Positives = 114/210 (54%), Gaps = 9/210 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L+ DDHP++ G+ +I+ PD+TVVG+A G + + LA PD+IL+DL MPGM+ Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTVVGQAKTGTEAVALARKHSPDVILMDLRMPGMS 82 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + +R + ++V + +ED+ AL GA YLLK M LL+A+ G Sbjct: 83 GVEATEVIRAERPESAVIVLTTYQGDEDIRKALAAGAQSYLLKGMSHLKLLEAIRSVRTG 142 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 A+ + L L+PRE DIL+LI +GL N+ IA L+IT T Sbjct: 143 HTYFPRAIRNSVPGKLNR---------AALSPREMDILRLIVRGLSNQEIADALNITRGT 193 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 VK HV +L+++ + R +A V Q I Sbjct: 194 VKWHVNIILRRLDVNDRTQAVVVAVQRGIV 223 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 2/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS +++ DDH +LR G+KQ+++ DI VV +A N + I+LA + D+++LD+ Sbjct: 1 MSFTSTIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTKGLDVVVLDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 ++P +G+E + ++++ +++ S+ + + AL+ GA GYL K + L+ A+ Sbjct: 61 SLPDRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAVGYLSKQSASDQLVTAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G+ +S + LA + + L+ RE L +IA GL IA L Sbjct: 121 RTVAKGKKYISAEVALALADQVSGGLEKP--IHDTLSNREFQTLTMIASGLSVSEIAENL 178 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV ++ +L+K+ L+ E + + + Sbjct: 179 SLSVKTVSMYRARLLEKLNLRHNAELTHYAIKNNLI 214 >UniRef50_A6M052 Two component transcriptional regulator, LuxR family n=8 Tax=Firmicutes RepID=A6M052_CLOB8 Length = 219 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 70/212 (33%), Positives = 131/212 (61%), Gaps = 9/212 (4%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L+DD ++R G+K ++S+ +I+++ EA NG+Q +++ + + PD+IL+D+ MP MN Sbjct: 2 INVVLVDDQQIVREGIKIILSLDNEISILKEAENGKQLLKILQEIQPDIILMDIRMPFMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E ++EK + ++++ + N +E V+ ++ GADGY+LKD D++K++ A G Sbjct: 62 GVEATKIVKEKYNNIKVIILTTFNEDEYVLQGIRNGADGYILKDARSHDIIKSIKAAYNG 121 Query: 127 EMVLSEALTPVLAASLRANR---------ATTERDVNQLTPRERDILKLIAQGLPNKMIA 177 +++L A+T L + + ++ + LT RE D+ KL+AQG NK I Sbjct: 122 DILLDPAVTTKLIRAFNSISIDKQNSRIINKQKKKLELLTQREMDVAKLVAQGNSNKDIC 181 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVW 209 L +TE TVK ++ ++ +K++L SR E A++ Sbjct: 182 HTLFLTEGTVKNYLTNIFEKLELSSRTELALF 213 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 115/209 (55%), Gaps = 2/209 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 + + DDHP++R G+KQL+ D +V GEAS+G + I+ D+ +LD MPG G Sbjct: 4 RVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEVIDQCGRFAWDVAVLDYRMPGKGG 63 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + +LR++ ++V SV ++ + L+ GA GYL K+ PEDL+ A+ + A G Sbjct: 64 IDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAAGYLTKESAPEDLVNAIRKVARGG 123 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 +S AL LA SL E +L+ RE I+ L+A G IA++L ++ +T+ Sbjct: 124 RFVSAALGEQLALSLSTG--GDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPNTI 181 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + K +L+K+ LKS E + ++ Sbjct: 182 STYRKRILEKLDLKSNAELMRYAIGHQLV 210 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 76/220 (34%), Positives = 124/220 (56%), Gaps = 12/220 (5%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD ++R+G++ L+ A DI ++ EA+NG + IELA L PDLIL+D+ MP M+ Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDIIAEAANGAEAIELARELSPDLILMDIRMPVMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE L ++L +++ + +E V+ AL+ GA GY+LKD PEDL+ A+ AA G Sbjct: 63 GLEATRALMAQTLHPEVLILTAFGTDEFVLQALRSGAAGYILKDTPPEDLIHAVRAAANG 122 Query: 127 EMVLSEALTPVLAASLRANRAT------------TERDVNQLTPRERDILKLIAQGLPNK 174 LS + L + + LT RER+I + +AQG+ N Sbjct: 123 TRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVAQGMTNA 182 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +AR L ++ +TVK H+ + K+ + +RV+ A+ V++ R Sbjct: 183 QVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVNERR 222 >UniRef50_C8NKN6 Two component response regulator n=3 Tax=Corynebacterium RepID=C8NKN6_COREF Length = 225 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 72/218 (33%), Positives = 118/218 (54%), Gaps = 4/218 (1%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 N++P +L+ DD P++ T + ++ +I VV ASNG++ IE A+ D+ +LD+ M Sbjct: 6 NEQPIRVLIADDQPLIVTALTTILGTQHNIDVVATASNGQKAIEAAQQWAIDVAVLDIQM 65 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P +NG++ +++ S +I++ + + E+ V AL+ G G+LLKD PE L+ A+++ Sbjct: 66 PYVNGIDAAQAIKQHRESTKILMLTTFDSEDLVRRALEVGVQGFLLKDAGPEALIDAINR 125 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPNKMIAR 178 G VLS +T + R + LTPRE ++LK +AQ N IA Sbjct: 126 IYHGASVLSPEVTEYVINVFRVSSPQPPSPCDTLFEALTPRELEVLKRVAQAETNAEIAN 185 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I TVK +V ++ K+ ++ RV AVW H I Sbjct: 186 YLHIGSETVKTYVSRLISKIGVRDRVGLAVWAHTSGIV 223 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 78/213 (36%), Positives = 115/213 (53%), Gaps = 9/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q P ++L DDH M+R G+ + + PD +V EA G++ I + PD+ LLD +P Sbjct: 3 QRPIRLMLADDHFMVRMGLATSLKLEPDFEIVAEADTGKEAISFYQHHRPDVALLDCRLP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M G+E LR + RI++ S N EEDV A++ GA+ YLLK+ +++ A+ Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNGEEDVFRAVQAGAESYLLKNARRTEIVTAIRTV 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG ++ +LAA +R +LTPRE+ +L I +G NK I L+IT Sbjct: 123 HAGSPYFPPEISAILAARMRR---------EELTPREKSVLFEIVKGSSNKEIGCCLEIT 173 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ES VK+HV H+L+K+ K R AA Q I Sbjct: 174 ESAVKIHVTHLLQKLNAKDRTHAATIAIQRGIV 206 >UniRef50_B2KE01 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KE01_ELUMP Length = 225 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 60/214 (28%), Positives = 115/214 (53%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 ++ ++++DD + R G+K +++ + VVGE S+GE+ + LA+ L PD+IL+D+ + Sbjct: 4 KKKKIRVVIVDDQTLFREGIKDVLTGEKWLEVVGEGSDGEEAVALAKKLKPDVILMDIKL 63 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P ++G+ K+RE + + +++ S E V+ A++ GA+GYL K + +LL ++ Sbjct: 64 PKLDGISATRKIREDNPAINVLMLSSFEDEAHVIEAIQAGANGYLSKMLPASELLNSIKT 123 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 + +++ + L L LR LT E ++ L+ +GL NK +A L Sbjct: 124 FTSEGLMIPQQLMGKLLHGLRKMGDNGTPSQALLTRTEIKVISLLGKGLSNKELATELSC 183 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 + T+K H+ K+ + SR EA V ++ + Sbjct: 184 SVKTIKNHLNSAFHKLGVGSRTEAVVKAIEKGLI 217 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 258 bits (660), Expect = 1e-67, Method: Composition-based stats. Identities = 75/207 (36%), Positives = 119/207 (57%), Gaps = 5/207 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDH ++R GV+ L+ P ++VVGEA +G++ + ++ D++L+DL+MP M+ Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSVVGEARDGQEAVAGIDAAASDVVLMDLSMPVMD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E + R++V + + E V L GA GY+LKD EP DLL A+H AA G Sbjct: 62 GVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHAAARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 E+ + + L A ++L+PRE +L+L+AQGL NK +AR L ITE T Sbjct: 122 EVPIDPRVAGALL-----PSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK H+ + +++ + R AA+W Sbjct: 177 VKAHLGRVFREIGVLDRTSAALWARDH 203 >UniRef50_C9Z3C4 Putative two-component system response regulator n=1 Tax=Streptomyces scabiei 87.22 RepID=C9Z3C4_STRSW Length = 221 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 119/211 (56%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 ++LL DD M+R+ ++ +I + D+ VVGEAS+GE I +A L PD++++D+ MP M Sbjct: 2 TVSVLLADDQDMVRSSMRIMIDVEADLKVVGEASDGEAAIGMAARLRPDVVVMDIRMPRM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ +R S ++ + + +E + L+ GA G++LK LL+ + A Sbjct: 62 DGVAATRSIRSASSPPAVLALTTFDLDEYLFGTLRAGAAGFVLKQDSAATLLEGIRAVAR 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 GE +S T L + T + ++T RERD+L L+ + + N IA RL I ES Sbjct: 122 GEGFVSPGPTRRLIERVSVPEDTPYQLPAEVTRRERDVLALLGRAMSNTQIAHRLHIEES 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV+++L K+ ++RV+AA+ + + Sbjct: 182 TVKYHVQNLLTKLDARTRVQAALIASRAGMV 212 >UniRef50_A8LG56 Two component transcriptional regulator, LuxR family n=4 Tax=Actinomycetales RepID=A8LG56_FRASN Length = 244 Score = 257 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 116/212 (54%), Gaps = 1/212 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 P ++LL+DD ++R G++ ++ +I VVGEAS+G Q + L PD++++D+ MP + Sbjct: 28 PVSVLLVDDEELVRVGLRVILESGGEIDVVGEASDGSQVVPLIRENTPDVVIMDIRMPRV 87 Query: 66 NGLETLDKLREK-SLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +GL + ++ + +I+V + ++ V AL+ GA+G+LLK P ++++A+ Sbjct: 88 DGLAAIREILADVADPPKILVLTTFELDDYVYEALRSGANGFLLKRARPAEIVQAVRTIV 147 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 + E +L +A A LT RE D+L+LI++GL N IA RL + Sbjct: 148 SSESLLFPEAIRYMAGKRPNREAHETMRRAVLTDREADVLRLISEGLSNNEIANRLYLGA 207 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV +L K+ + R +A + ++ Sbjct: 208 QTVKSHVSSVLAKLGARDRTQAVIIAYESGFV 239 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 116/211 (54%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E +L++DDHP++R G++ ++ + + EA+ + + + ++ +D+ +P Sbjct: 52 ERIRVLIVDDHPVVRRGLRTMLEGESWVDGIAEAATCAEAVSSVVADRVGVVAMDVALPD 111 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+E ++ R+++ ++++ E+ V +L+ GA GY+LKD +P+ ++ AL A Sbjct: 112 GDGVEATRRILLSRPETRVLMLTMADDEDVVNRSLRAGARGYVLKDTDPDVIIDALRTVA 171 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G +VL + P + +L+ ++LTPRERDIL+ +A G N IARR ++E Sbjct: 172 GGGLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRFGLSE 231 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ + + K+ + RV+AA+ + Sbjct: 232 KTVRNQLSAVFAKLGVTDRVQAALLARDAGL 262 >UniRef50_D2PZN7 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PZN7_9ACTO Length = 242 Score = 257 bits (658), Expect = 2e-67, Method: Composition-based stats. Identities = 66/218 (30%), Positives = 115/218 (52%), Gaps = 8/218 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 ++L DD +LR + L+ DI VVGEA +GE+ + L PD++++D+ MPG Sbjct: 14 RRLRVVLADDQALLRGAFRTLLDSTDDIAVVGEAGDGEEAVALTRRTHPDVVVMDIQMPG 73 Query: 65 MNGLETLDKLREKSLSG---RIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 M+GL ++ R+++ + +E V AL+ GA G++ K ++ + L+ A+ Sbjct: 74 MDGLTATAQICA-DPDLRASRVLILTTYETDEYVAQALRAGASGFIGKGIDADGLIDAVR 132 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTER----DVNQLTPRERDILKLIAQGLPNKMIA 177 A G+ +LS A T L A A T + LTPRER+++ L+A GL N IA Sbjct: 133 TIADGDALLSPAATRSLVARFLATPVDTAPRDVERLVALTPREREMVALVATGLSNLEIA 192 Query: 178 RRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 R+ ++ TV+ HV+ + K++ + R + ++ + Sbjct: 193 DRMYVSPFTVRAHVQRAMTKLEARDRAQLVAIAYRTGL 230 >UniRef50_B1WQK4 Two-component response regulator n=19 Tax=Cyanobacteria RepID=B1WQK4_CYAA5 Length = 247 Score = 256 bits (657), Expect = 2e-67, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 122/209 (58%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 IL+++D P+++ G++Q +S P+ ++G+A +G G++ A L PDL+++D+ +P ++G Sbjct: 39 RILIVEDDPLMQLGLEQALSEHPNFEIIGQAEDGYTGVQQALELKPDLVVMDIGLPRLDG 98 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 + +++E+ + +V+ + + +VV AL GAD Y +K E LL A+ A G Sbjct: 99 IAATKQIKEQEPNIHVVMLTSHTLQTEVVAALSSGADAYCIKGASLERLLAAIEAAQDGA 158 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 L + ++ +L++ +++ L+ RE ++LKLI +G N IA L ++ +T+ Sbjct: 159 TYLDPQIARLVLDNLKSPNPEPNQNIALLSERELEVLKLIVEGKSNNEIAEDLYLSTNTI 218 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV+ ++ K+ + RV+AAV + + Sbjct: 219 KTHVRGIMNKLAVDDRVQAAVVALRSGLV 247 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 1/209 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL DDH M R ++ L++ P++ VV EA++GE+ + +A++ DL+ +D+ MPGM+ Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQPVDLVCMDIAMPGMD 62 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L + + R++ S + V L GA GY+ K ++LL+A+ G Sbjct: 63 GIEATRRLLARHPALRVIGLSAFADRQFVTDLLAAGARGYITKGEAGDELLRAIRTVCEG 122 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + +A +LR + +LT RER +L+LIA+GL + I RL I ST Sbjct: 123 RSYLCPEVAATVADALRDSPGVYAA-APRLTARERQVLQLIAEGLTSVQIGDRLHIAAST 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 V+VH +++++K+ L + E + I Sbjct: 182 VEVHRRNLMRKLDLHNVAELTRYAIHSGI 210 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 256 bits (657), Expect = 3e-67, Method: Composition-based stats. Identities = 59/210 (28%), Positives = 110/210 (52%), Gaps = 1/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDH ++RTG+ ++++ + VVG+A GE ++LA L PD++L+D+ MPG+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVVGQADCGEDCLKLARELKPDVVLMDVKMPGIG 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE KL ++VV +V + ++ GA GY+ K E++++A+ Q AG Sbjct: 62 GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAAGYMTKGAGLEEMVQAIRQVFAG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +S + LA + + L+ RE I +IA + I+ +L ++ T Sbjct: 122 QRYISPQIAQQLALK-SFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCLSPKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V + + +K+ + S VE A+ + + Sbjct: 181 VNTYRYRIFEKLSITSDVELALLAVRHGMV 210 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 256 bits (656), Expect = 3e-67, Method: Composition-based stats. Identities = 68/216 (31%), Positives = 131/216 (60%), Gaps = 2/216 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAE--SLDPDLILL 58 M ++E +++ DDH M+ G++ LI + DI V+G A NG +L E LD D+ +L Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 59 DLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLK 118 D++MP +GLET K+R + + ++++ ++ N+E + + GA GY+LK+ +L+ Sbjct: 61 DVDMPVQDGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVN 120 Query: 119 ALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 A+ AGE S+A+T L S++ ++ +LT RE+++L LI +G+ K I++ Sbjct: 121 AIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISK 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +L I ++TV+ H ++++ K+++K+ E ++V + + Sbjct: 181 QLFIADTTVETHRRNLIDKLEVKNSKELILYVAKNK 216 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 67/210 (31%), Positives = 114/210 (54%), Gaps = 3/210 (1%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 ++ DDH ++R GV+ L+ P TV GEASNG + + LA+ L PD+++LD+ MP +NGLE Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQELRPDVVVLDVTMPELNGLE 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 ++R I++ +V + ++ + AL GA GY+LK+ L+ A+ + Sbjct: 61 ATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKHAPY 120 Query: 130 LSEALTPV---LAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + AA R + V LT RER++L+L+AQG N+ +A +L I+ T Sbjct: 121 VPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSISAKT 180 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H ++++K+ S V+ + + I Sbjct: 181 VETHRANVMRKLGASSIVDLVHYAIRNGIV 210 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 256 bits (655), Expect = 4e-67, Method: Composition-based stats. Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 6/215 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+ + +LLID+HP++ G+K ++ I V G A + G+++A + P ++L+D+ Sbjct: 1 MTERPKIRVLLIDNHPLVLDGLKAVLETFDHIEVAGTAGLAQTGLDIARQIQPQVVLMDI 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NMP ++G++ ++ R + R+V+ S+ + E + +++ GA GY+LKD+ ++++ A+ Sbjct: 61 NMPKLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G S + L E + LTPRE DIL LI G N+ IA L Sbjct: 121 ETVADGGTYFSSGVFDALMGE------RAEEGSDPLTPREHDILGLIVAGRSNREIAEVL 174 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 I+ +T + H K++ KK+ + + + I Sbjct: 175 GISSATAETHRKNLKKKLGIATTAGLIRYALDHGI 209 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 61/213 (28%), Positives = 125/213 (58%), Gaps = 1/213 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 + +I++ DDH ++R G+K L+ + VVGEA++G++ I+ ++LDP++++LD+ MP Sbjct: 3 KKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDGDELIQFIDTLDPEIVVLDITMPK 62 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+E + ++++ + + +V S+ ++ E V+ +++ GA YLLK+ + E+++KA+ + Sbjct: 63 KSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKAVKAVS 122 Query: 125 AGEMVLSEALTPVLAASLRANR-ATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AG+ S + ++ L + LT RE ++LK ++ GL K+IA +L I+ Sbjct: 123 AGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADKLFIS 182 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++KK+ + + E I Sbjct: 183 VRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 256 bits (655), Expect = 5e-67, Method: Composition-based stats. Identities = 61/212 (28%), Positives = 123/212 (58%), Gaps = 2/212 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E I ++DDH ++R G++ L + ++ +VGEA++GE+ +++ + PD++LLD+ + G Sbjct: 2 EKIKIFIVDDHEVVRLGLQGLFARYEELEIVGEAASGEEAVQVVPVIKPDVVLLDVRLQG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 ++G +T + ++V+ S E+V A GA Y+LK++ +++KA+ Sbjct: 62 IHGADTCRLITSAVPGIKVVMLSSFAEPEEVQAAFTAGASAYVLKNITSGNVIKAIKAVM 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 GE + +T + + +R +A ++ ++ L+ RE +IL L+ +G NK I R L ++E Sbjct: 122 QGESFIDPEITEQVMSLIRGEKAASQ--ISGLSKREEEILHLVGEGKTNKEIGRELFLSE 179 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ HV +L K+ + +R +AA ++ + + Sbjct: 180 KTVRNHVSRILDKLGVSNRSQAAAFMARRSVI 211 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 255 bits (654), Expect = 6e-67, Method: Composition-based stats. Identities = 73/226 (32%), Positives = 122/226 (53%), Gaps = 16/226 (7%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + L+DDHP R G++++I P+ VVGEA++GE+ I + + PDL+L+D+NMPGM Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMVVGEAASGEEAIARIDDVLPDLVLMDINMPGMG 67 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE +L+ S +IV+ +VS+ + A+KRGA GYL K++ P + L Sbjct: 68 GLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAVVDD 127 Query: 127 EMVLSEALTPVLAASLRANRATTERDV----------------NQLTPRERDILKLIAQG 170 E +S+ + L + + + LT RE+DIL+ + G Sbjct: 128 EAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERVVTG 187 Query: 171 LPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 NK IA ++E TVK H+K++L+K+ L +RV+ + +++ + Sbjct: 188 ESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYAYEQGML 233 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 255 bits (653), Expect = 8e-67, Method: Composition-based stats. Identities = 62/213 (29%), Positives = 119/213 (55%), Gaps = 4/213 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +L++DDHP+ R GVK L+ + + VGEA G + + LA+ L PDL+ +D+++P M+G Sbjct: 5 RVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQELKPDLVTMDVSLPDMSG 64 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E + + + + RI++ S+ + V A K GA GY++K+ L++ GE Sbjct: 65 IEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALCRGE 124 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQ----LTPRERDILKLIAQGLPNKMIARRLDIT 183 + ++ L A L A + ++ LTPRE+ +L+L+A+G + IA ++++ Sbjct: 125 FFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAIELS 184 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++KK+ + S++E + + + Sbjct: 185 PKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 74/211 (35%), Positives = 115/211 (54%), Gaps = 8/211 (3%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG-M 65 I+L+DDHP+LR G++ L+ D VVG+ + E+ L +S PD++L+DL + G Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGDPEEYRLLLKSARPDIVLMDLALGGDT 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ R S S ++VF+ + + D V +L GA GYLLKD P +L A+ A Sbjct: 62 DGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVELFAAIRTARD 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G LS A+ L +RA + LTPRE ++L L+A G N+ + RL ++E+ Sbjct: 122 GGSALSPAVASRLMDRMRAPQ-------ESLTPREIEVLALLATGRTNRQVGERLFVSET 174 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK HV H+ K+ + +R A +E + Sbjct: 175 TVKTHVNHIFTKLGVDTRAAAVSRAMKEGLI 205 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 67/208 (32%), Positives = 121/208 (58%), Gaps = 5/208 (2%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 I ++DDHP+ R G+ +SM D +VG+A+NG++ +E +L PD++L+D++MP MNG Sbjct: 2 RIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKMPNLMPDIVLMDISMPEMNG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 ++ + ++K +I++ S+ + +E V++ L RG GY LKD+ ++ AL G Sbjct: 62 MDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGG 121 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + S A++ +L S + T LT RE+ +L+L+A GL NK +AR LDI+ T+ Sbjct: 122 IYYSRAISDLLVQSSQEPDKNT-----VLTTREQTVLRLLASGLNNKELARELDISVRTI 176 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + H +++ K+ +K+ + + Sbjct: 177 ETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 255 bits (652), Expect = 9e-67, Method: Composition-based stats. Identities = 70/209 (33%), Positives = 122/209 (58%), Gaps = 6/209 (2%) Query: 9 ILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD-PDLILLDLNMPGMNG 67 I+L+DDH ++R G+K L+S V+ + +NG + +E + PDLI++DL MP +NG Sbjct: 6 IILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVMPELNG 65 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +++ K +++V S EE V+ + GADGY +KD EP+ L+ + Q AAGE Sbjct: 66 IEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGADGYEMKDSEPKALINTIKQIAAGE 125 Query: 128 MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTV 187 + + +R + N L+ RE ++LK +++GL NK IA +L ++E TV Sbjct: 126 QIFHPDVMK-----VRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSEKTV 180 Query: 188 KVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 K HV H+ K+++ R +A+++ + ++ Sbjct: 181 KTHVSHIFAKLEVGDRTQASMYGVKYKLI 209 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 70/222 (31%), Positives = 124/222 (55%), Gaps = 6/222 (2%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P + L DDHP+LRTG++ +S DI +GEAS+G + +E + PD+ L+D+ Sbjct: 1 MPKSPPFKVFLADDHPLLRTGLRMSLSRFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPG++G+ + LR++ +++ S + + + A++ GADGY+LK ++ +L + Sbjct: 61 DMPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQ------LTPRERDILKLIAQGLPNK 174 + GE +S L + + + LT RE+ IL +AQG NK Sbjct: 121 RAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNK 180 Query: 175 MIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ L I+ TVK H+K++ KK+++KSR+EA + ++++ Sbjct: 181 EISNALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 69/215 (32%), Positives = 116/215 (53%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 + I LIDDHP++R G + +S PD+ VVG+A + S PD++L+DLN Sbjct: 17 TPASKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRETASCKPDVVLVDLN 76 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 +P +G+E L LR + +++V S + E V AL+ GA GYL+K + E++++ + Sbjct: 77 IPDRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLVKTSKLEEVIEGIR 136 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 + A G LS ++ + ++R + ++ LTPRER +L+L+A G+ + A RL Sbjct: 137 RIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLT 196 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I+ TV+ H + K+ KS VE + + Sbjct: 197 ISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLI 231 >UniRef50_A8LHM9 Two component transcriptional regulator, LuxR family n=1 Tax=Frankia sp. EAN1pec RepID=A8LHM9_FRASN Length = 215 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 73/212 (34%), Positives = 118/212 (55%), Gaps = 3/212 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DD P++R G+K LI D+ + GEA +G+ + L PD++LLD+ MP ++ Sbjct: 2 IRVVVADDQPLVRLGLKVLIETEDDLELTGEAEDGQAALALVRRTRPDVVLLDIRMPVLD 61 Query: 67 GLETLDKLRE--KSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 GL L + R+V+ + +E V AL+ GA G++LKD EP DLL+A+ A Sbjct: 62 GLAALRAITADPALTDTRVVMVTTFELDEYVFEALRNGASGFVLKDTEPADLLRAIRVVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTER-DVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AGE +LS +T + + A D+ LT RER+++ L+ GL N IA RL I+ Sbjct: 122 AGESLLSPTITRRVIETFARRPAAPAAVDLTSLTVREREVMGLVGLGLSNDEIAARLVIS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 +T + HV ++ K+ + R + AV +Q + Sbjct: 182 PATARTHVSRVMVKLSARDRAQLAVLANQAGL 213 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 118/213 (55%), Gaps = 9/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + +L++DDH M+R G+ + I+ D+T+VGEA+NG Q +E PD++ +D +P Sbjct: 2 KRKIRVLIVDDHAMMRLGLVEAIAGERDLTLVGEAANGTQCLEQYRKHQPDVVTMDFRLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G +G E+ LR + R+VV SV EED+ A++ GA GY+ K E E++L+A+ Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEGEEDIWRAVEAGAMGYVSKSAEVEEVLEAIRCV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 GE + LA+ R + LTPRE +L I GL NK IA L ++ Sbjct: 122 VGGETYFPAPIASKLASR---------RTRDALTPREHQVLHHIVAGLSNKEIAAALHMS 172 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E+TVK+H+ + L K+ + R +AA+ Q I Sbjct: 173 EATVKLHISNTLAKLHVADRTQAAIVAVQRGII 205 >UniRef50_C1TRD8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TRD8_9BACT Length = 222 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 120/212 (56%), Gaps = 1/212 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 ++ +L++DDH + RTGV +S+ DI VVGEA +G + +E + +D D+ L+D+ MP Sbjct: 2 EKTIRVLVVDDHAIFRTGVINTLSLEDDIEVVGEAGDGLEALEFMKKVDFDVALVDVTMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 M G+E + K+ E ++ ++ + + D+V K G G++LK ++L+ A+ Sbjct: 62 RMGGVELVSKMEETGMARSVIALTALEDDRDMVFLSKAGVKGFVLKTSGFDELISAIRTV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 + G+ + L + + ER +++L+ RE ++L +AQGL + IA RL ++ Sbjct: 122 SGGDNYVDSRAAGKLLNCF-SEDTSRERGMSRLSERELEVLYWLAQGLNGQEIAERLSLS 180 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + TVK H+ H+L K+K+ R +A W + + Sbjct: 181 DKTVKNHISHILAKLKVSDRTQAVAWAWRSGL 212 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 5/211 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP-GM 65 ++++DDH ++R G++ ++ I VVGE S GE ++ A PD++L+D++MP G+ Sbjct: 4 TRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAVKDRPDVMLMDVHMPQGL 63 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+ T LR+ + R+++ ++ + V L G G + K + +++ A+ Sbjct: 64 DGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQHGQP 123 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G LS A + R +L+PRE ++L L+AQG N+ +A L I+ Sbjct: 124 GHPYLS----RRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVK 179 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +H+++++ L SR + +Q + Sbjct: 180 TVETHRQHIMRRIGLHSRAALVRYAYQNGLV 210 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 1/210 (0%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 I+L DDH M R ++ ++ P I +VGEASNG++ I+L D+ +D+ MPGM Sbjct: 2 TIRIVLADDHQMFRHALRAMLEKEPGIRIVGEASNGDELIDLISHQPVDIACVDIGMPGM 61 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 NG+E +L R++ S + + V+ L GA GY+ K E+LL+A+H Sbjct: 62 NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQQ 121 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 + L + + +L N A + ++T RER +L+LIA+G + IA RL + S Sbjct: 122 SKTYLCPDVAATVTNALLDN-APKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPS 180 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+VH +++++K+ L S E + + I Sbjct: 181 TVEVHRRNIMRKLDLHSVAELTKYAIRSGI 210 >UniRef50_C4DM40 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DM40_9ACTO Length = 221 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 68/217 (31%), Positives = 115/217 (52%), Gaps = 7/217 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 P +++ DD ++R + L + PDI +V EA++G+ + PD++LLD+ MP Sbjct: 2 NPIRLVVADDQKLIRMALSTLAAGEPDIELVAEAADGKAALTAIRDHSPDVLLLDIRMPI 61 Query: 65 MNGLETLDKLREKSLS--GRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 M GLE L + E R+++ + + ++ V +L+ GA G+L KD +PE +L A+ Sbjct: 62 MGGLEVLRHI-ETDPDATVRVIMMTTFDIDQYVFESLEHGAAGFLTKDTDPEFILHAVRV 120 Query: 123 AAAGEMVLSEALTPVLAASLRANR----ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 AAGE +LS +T + R ++ LT RE +IL +A GL N IA Sbjct: 121 VAAGESLLSPGVTRRVIDRFTRGRHARTGEPHPGLDSLTARETEILGWVATGLSNDEIAE 180 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 RL ++ +TV+ HV + K++ + R + V ++ I Sbjct: 181 RLVVSPATVRTHVGRAMMKLRARDRAQLVVIAYRSDI 217 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 76/213 (35%), Positives = 121/213 (56%), Gaps = 10/213 (4%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + ILL+DDH ++R G+ S PD+ VV + NG + IE + PD+++LDL M Sbjct: 7 SDKIRILLVDDHMVMRMGLVTATSDEPDMEVVADVENGAEAIEAYRAHRPDVVVLDLRMH 66 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 GM+G++ + LR + + R++V+S E+V ALK GA G+++K+M E LL+A+ + Sbjct: 67 GMSGVDAIRALRSEFGNVRVLVYSNYAAGEEVYQALKAGASGFVVKEMALERLLEAIRKV 126 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 AGE + + + L + QL+PRE D+LKL+A+G NK IA L + Sbjct: 127 HAGEQYVPPEIAMRMGERL----------MAQLSPRELDVLKLVAKGRSNKEIAAELHVV 176 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 E T K+HV ++L K+ + R +A V + I Sbjct: 177 EGTAKIHVANILTKLGVSDRTQAIVVAVRRGII 209 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 254 bits (651), Expect = 1e-66, Method: Composition-based stats. Identities = 67/213 (31%), Positives = 115/213 (53%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 +LL++D P+ R G+ ++ P I +V EA +GE + LA P L+LLD+ +P Sbjct: 2 SGRVRVLLVEDDPLFRMGLAMVLRHQPQIELVAEAEDGETALALANRHRPQLVLLDIGLP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++G +TL +L+++ R++V + V L+ GADGY LK + P+ LL + + Sbjct: 62 GLDGRQTLVRLKQEHPEIRVLVLTSREEAGLVQAMLQAGADGYCLKGIGPDRLLTVIREV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +AG + + ++ + + LT RER++L IA+G N I R+L I+ Sbjct: 122 SAGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQLHIS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+VHV +L+K+ R +AAV ++ + Sbjct: 182 SGTVRVHVHAILRKLGATDRTQAAVLALEKGLI 214 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 63/210 (30%), Positives = 114/210 (54%), Gaps = 2/210 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ILL+DDH ++RTG+++++ VVGEA+ GE+ ++ PDL+L+D++MPG+ Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGFVVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGIG 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 GLE ++ S + R++V SV ++ GA GYL KD +P+++ A+ + AAG Sbjct: 62 GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAFGYLTKDSDPKEMELAIRKVAAG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 + +S + +A + A + L+ RE +I ++ +G IA+ L+I+ T Sbjct: 122 QKYVSPDIAQQIA--IGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNISAKT 179 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V H M +K+ + + VE + ++ Sbjct: 180 VNTHRYRMFEKLNVSTDVELTHLALRHKLI 209 >UniRef50_C6XAG0 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C6XAG0_METSD Length = 232 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 107/212 (50%), Positives = 149/212 (70%), Gaps = 1/212 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 P + LIDDH + R GV Q+I P VVGEA++G +G+ LA L PD++L+DLNM Sbjct: 21 ASPTKVFLIDDHALFRKGVGQMIEADPAFRVVGEAASGSEGLLLAPPLQPDVVLIDLNMK 80 Query: 64 GMNGLETLDKLR-EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 G+NG+ETL + + E SL R VV +VS+ E+D++ AL+ GADGYLLKDMEPEDL +L + Sbjct: 81 GLNGIETLRRFKTESSLQARFVVLTVSDAEDDLLEALRAGADGYLLKDMEPEDLCASLKK 140 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 +G V+ ++LT VL +L R D LT RE++IL+ +A GL NK IAR+L I Sbjct: 141 VISGMTVIQDSLTEVLKQALLEPRTRKADDDVALTDREQEILQCLADGLNNKTIARKLGI 200 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +++TVKVH+KH+L K+KL SR+EAAVW H+++ Sbjct: 201 SDTTVKVHIKHLLSKLKLTSRLEAAVWAHRKK 232 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 70/218 (32%), Positives = 126/218 (57%), Gaps = 4/218 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M+N ++L+++DH +LR G++ ++S V GEA +G + +LA SL PDLIL+DL Sbjct: 1 MNNN--CSVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCPDLILMDL 58 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 ++PGMNG++ + ++ +S RI+ SV ++E V AL+ G DGY+LKD +DL+ A+ Sbjct: 59 SLPGMNGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAGVDGYVLKDTSFDDLVTAM 118 Query: 121 HQAAAGEMVLSEALTPVLAASLRANR--ATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 G+ LS L L S + +T + + LT RER +LKL+A+G N+ + Sbjct: 119 RVVLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGI 178 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++++ T++ + +++K+ + + E + + Sbjct: 179 YMNLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 56/213 (26%), Positives = 113/213 (53%), Gaps = 3/213 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 + ++DDH +R + ++S D+ VVG A +GEQ +EL L PD++L+DL MP ++ Sbjct: 91 IRLCIVDDHSFIRESLHTILSGLEDLQVVGMAEDGEQALELCGRLKPDVVLMDLEMPNLD 150 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++++ R+++ S + E ++ GADGY+LK ++ +L +++ G Sbjct: 151 GIHATKMIKKRWPEIRVLILSTFQNTERAKEIIRNGADGYVLKSIDSRELAESIRLVYRG 210 Query: 127 EMVLSEALTPVLAASLRAN---RATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 +++ L + + + ++ L+ RE +IL+L++QG K IA L ++ Sbjct: 211 GAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIASTLYLS 270 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ + ++ +K+ +K+R EA + Sbjct: 271 NGTVRNYASNLYEKLGVKNREEAVQKAKDIGLL 303 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 59/211 (27%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +++ DDH + GV+ ++S D+ V+ A G++ +EL PD++++D+ MP MN Sbjct: 2 IPLIIADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQHHPDVVVMDVTMPKMN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +++ +I+ S+ + + LK GA GY LK+ E+L++A+H ++G Sbjct: 62 GIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSG 121 Query: 127 EMVLSEALTPVLA-ASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 E LS + +L L+ + L+ RER++L L+A+G K +A L I+++ Sbjct: 122 ETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKN 181 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV H + +++K+ + E + +E + Sbjct: 182 TVDTHRRRIMEKLDCGNIAELIRFAIREGLI 212 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 70/211 (33%), Positives = 121/211 (57%), Gaps = 4/211 (1%) Query: 6 PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGM 65 IL+ +D ++R G+ L+ D+T+VGEA +G+ IE+A +L PD++L+DL+MP + Sbjct: 2 TVRILIAEDQQLVRQGLVALL-AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPEL 60 Query: 66 NGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAA 125 +G+E ++++ + R++V +V+N E V AL GADGY LK + +L+ A++ A Sbjct: 61 DGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGELMAAINAVCA 120 Query: 126 GEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 G+ L L+ L ++ LT RER++L+LIA+G N+ IA L I Sbjct: 121 GKTYLGPGLSEDLVKEYLEG---SDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TV+ H +++K+ L + E A + + + Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYAIRRGLI 208 >UniRef50_C0INV4 Two component transcriptional regulator n=1 Tax=uncultured bacterium BLR5 RepID=C0INV4_9BACT Length = 215 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 71/217 (32%), Positives = 114/217 (52%), Gaps = 10/217 (4%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M I+ +DDHP++ G+ LI PD+T+VG S + PD+ L+DL Sbjct: 5 MDPSAEIRIMCVDDHPLMHKGISALIQSQPDMTIVGAVSKAGDALATFREKVPDITLMDL 64 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +P NG++T+ + ++ RI++ ++ + ++ ALK GA GY+LK+M PEDLL+ + Sbjct: 65 RLPDGNGIDTMISILKEHPKARIIILTMFEGDVEIQRALKSGACGYILKNMPPEDLLQVI 124 Query: 121 HQAAAGE-MVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARR 179 + +GE L + LA LT RE ++L+LI++G NK + R Sbjct: 125 RKVHSGEKKRLHPVIAATLADHFGE---------ENLTSRETEVLQLISEGNSNKEVGNR 175 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+E TVK HVK++L K+ R +A + I Sbjct: 176 LSISEETVKGHVKNILGKLGANDRTQAVSIAVRRGII 212 >UniRef50_D1BTX1 Two component transcriptional regulator, LuxR family n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BTX1_XYLCX Length = 220 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 3/215 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 Q P +LL DD LR+ ++L+ VV E +G + + LA PD+ LLD+ MP Sbjct: 3 QSPIRVLLADDDARLRSVYRKLLDRTEGFVVVAETGDGAEAVRLARERTPDVALLDVQMP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G++GL+ + R+V+ + + +E V AL G G+LLK+ P ++L A+ Sbjct: 63 GLSGLDAARAILAGG-QVRVVMLTTFDLDEYVHDALTAGVSGFLLKNATPAEVLAAVRSV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDV--NQLTPRERDILKLIAQGLPNKMIARRLD 181 AG +L+ +T L L R L+ RE D+++L+A G N+ IA L Sbjct: 122 HAGHALLAPEVTGRLIRHLAPPRPDHPHPFVGKVLSQREVDVVRLVALGRSNQQIADELV 181 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 ++ TV+ +++ M K+ + R + AV ++ + Sbjct: 182 LSLETVRTYLRRMFAKLDVNDRTQLAVLAYRAGLL 216 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 253 bits (649), Expect = 2e-66, Method: Composition-based stats. Identities = 74/207 (35%), Positives = 120/207 (57%), Gaps = 5/207 (2%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 +L++DDH ++RTG+ LI+ A D+ VVG A++G + +E L P ++L+DL+MP ++ Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRVVGTAADGAEAVEEVARLAPHVVLMDLSMPVLD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+ ++ E+ S ++V + + + V+ AL GA GY+LKD EP DLL A+ A G Sbjct: 62 GVAATRRIVEEHPSVEVLVLTSFSDRQRVIEALDAGAGGYVLKDTEPADLLAAIRSTARG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + + + R+ E LT RE+++L L+ GL NK IARRL I EST Sbjct: 122 HSPLDPRVARTVLHARRSPVRAAE-----LTEREQEVLALVGHGLANKQIARRLGIREST 176 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQE 213 VK H+ + +++ ++ R A +W Sbjct: 177 VKAHLTSVFQRIGVRDRTSATLWARTH 203 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 253 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 70/213 (32%), Positives = 119/213 (55%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 + ++L DDH + RTG L++ P+ VVG+A++G+Q I+L + L PD+ +LD+ MP Sbjct: 2 TDTVRLVLADDHEVTRTGFVSLLAGHPEFEVVGQAADGQQAIDLCQELQPDIAILDIRMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 +NGL L+++ ++V+F++ + + + A+ GA GYLLKD ++++ L + Sbjct: 62 VLNGLGAARILQQRMPGLKVVIFTMDDSTDHLEAAMSAGAVGYLLKDASRDEVIDGLQRV 121 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A GE L+ A++ L + + LTPRER +L L+A G N+ I +L IT Sbjct: 122 ARGEEALNSAVSARLLRRMTERNTSGAALPETLTPRERQVLGLVAGGFSNREIGEKLGIT 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 T K HV+ ++ K+ R +AAV + Sbjct: 182 TGTAKAHVEKVIGKLGASDRTQAAVRGVALGLV 214 >UniRef50_D2PS71 Two component transcriptional regulator, LuxR family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PS71_9ACTO Length = 220 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 59/213 (27%), Positives = 116/213 (54%), Gaps = 1/213 (0%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 +++ +D +R + +L+ P + ++G + G++ IELA L PD++L+D+ MP Sbjct: 2 SARIGVVVAEDQSSVRAALAELVGSDPALDLLGCGATGDEAIELATRLHPDVVLMDIRMP 61 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G +GL + + + +++V + + +E V AL GA G+LLK D+L+A+H Sbjct: 62 GTDGLTATRVVCARLPATKVLVLTTFDLDEYVYEALGAGATGFLLKSAPVTDILRAIHTV 121 Query: 124 AAGEMVLSEALTPVLAASL-RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G+ +LS +T L A + R T QL+PRE +++ + +GL N+ +A L + Sbjct: 122 HEGQAMLSPEITRRLIAEVSRGRTRRTPEAFEQLSPRELELVGAVLRGLSNEELAAELFL 181 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 + STVK ++ + K+ ++ R + + ++ + Sbjct: 182 SLSTVKTYLSRIFSKLDVRDRTQLVILAYESGL 214 >UniRef50_Q5WJ71 Two-component response regulator n=5 Tax=Bacillaceae RepID=Q5WJ71_BACSK Length = 210 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 68/209 (32%), Positives = 117/209 (55%), Gaps = 2/209 (0%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 TILL +D ++R G+K +I V+ EA NG++ ++LA DL+L+D+ MP M G Sbjct: 3 TILLAEDQQIVRQGLKMMIEHRQRYQVI-EAENGQEAVDLAGRHVIDLVLMDVRMPVMTG 61 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 +E +L E+ + +IV+ + E + ALK GA GY+LKD + E L + +A GE Sbjct: 62 IEATKRLIERDPNVKIVMLTTFIDERYAIEALKAGAKGYILKDADMESLFATIEKALLGE 121 Query: 128 MVLSEALTPVLAASLRANRATTERD-VNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 +VL + + L + A E++ + L RE++I++L+ QG N IA L ++ T Sbjct: 122 LVLDGQVAAKVMPKLLQHSAPQEKEQIPPLAEREKEIIRLVGQGRNNAEIAAELYLSVGT 181 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 VK ++ + K+ ++ R + A++ + I Sbjct: 182 VKNYISQLFIKLGVRDRTQLAIFAVKHDI 210 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 65/216 (30%), Positives = 121/216 (56%), Gaps = 4/216 (1%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 MS +E +LL+DDH ++R+G+ +L+ I VV EA +GEQ ++ PD+ ++DL Sbjct: 1 MS-EEIIRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLPDVTVMDL 59 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 +MPGM GLE + ++ + + R+++FS+ + + LK GA GY+ K ++L+KA+ Sbjct: 60 SMPGMGGLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGARGYVAKTGSFDELVKAV 119 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 + A G+ +S ++ +A ++QL+PRE ++ +L A+G + IA L Sbjct: 120 VEVARGKSYISTSIAQKIA---LQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVL 176 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 I++ TV + + +K+ L + VE + + + Sbjct: 177 KISQKTVANYHTLVKQKLGLSNPVEMVRFAIKHGLI 212 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 116/204 (56%), Gaps = 2/204 (0%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 T+++ DDH ++R G+K ++ I+V+G A NGE+ + L L+PD+ L+DL+MP + Sbjct: 5 VTVVIADDHALVREGLKTILKSQSGISVLGMAENGEEAVRLCRRLNPDVALMDLSMPIKS 64 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G++ + +L + + + + + + +AL GA GY+LK ++L+ A+ G Sbjct: 65 GVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETVMQG 123 Query: 127 EMVLSEALTPVLAASL-RANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 ++ L+ ++ +A + +R+ + + LT RER++LK + G N+ IA L I+ Sbjct: 124 KVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVISVK 183 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVW 209 TV+ H + +KK+ L+S+ E + Sbjct: 184 TVEKHRSNFMKKLGLRSKAELKAY 207 >UniRef50_A9U739 Predicted protein n=2 Tax=cellular organisms RepID=A9U739_PHYPA Length = 214 Score = 253 bits (648), Expect = 3e-66, Method: Composition-based stats. Identities = 66/210 (31%), Positives = 116/210 (55%), Gaps = 1/210 (0%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 E +LL DD ++ + ++SM PD+ +VG A NGE+ ++ E L PD++L+D+NMP Sbjct: 2 EKIKVLLADDQELILESLHIVLSMEPDLEIVGLARNGEEAVKGCEQLMPDMVLMDVNMPV 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+ ++E+ + +I++ + E V+ AL GA+GYLLK + P+DL + Sbjct: 62 MDGVAATALIKERMPATKIIMLTSYKEVEYVLAALSHGAEGYLLKAIHPKDLAAGIRVVQ 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 AG ++S+ + + ++ + + LT RE ++L +A GL N+ IA L ++E Sbjct: 122 AGGTLISQEMASKMIKNMNSATPAKHNEF-GLTAREIEVLHKLAAGLRNQEIAEALFLSE 180 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 TVK ++ + K+ +K R EA Sbjct: 181 GTVKNYISTIYSKLNVKGRREATQKARDSG 210 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 1/208 (0%) Query: 10 LLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLE 69 +++DDH ++R G+K L+ TV EA +GE+ + L DL+++D++MPGM GL Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALRLLAQQPIDLVIMDISMPGMGGLA 60 Query: 70 TLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMV 129 + ++R + +I+V S+ EE + A++ GA GYL K +L AL + G Sbjct: 61 CIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQGRRY 120 Query: 130 LSEALTPVLAA-SLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITESTVK 188 LS L R + + LT RER++ + G IA +L ++ TV Sbjct: 121 LSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVKTVD 180 Query: 189 VHVKHMLKKMKLKSRVEAAVWVHQERIF 216 H KH+ +K+ R E + + Sbjct: 181 THKKHIYEKLHCSRRSELVTLALRNGLL 208 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 95/214 (44%), Positives = 137/214 (64%), Gaps = 2/214 (0%) Query: 1 MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDL 60 M P ++++DDHP++R GV+QL+ + P VV EA +G I+LA LD D+ILLDL Sbjct: 1 MPEATPFQVMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASAIDLANRLDIDVILLDL 60 Query: 61 NMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKAL 120 NM GM+GL+TL+ LR ++ +I++ +VS+ DV + GADGYLLKD +PE LL+A+ Sbjct: 61 NMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAI 120 Query: 121 HQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRL 180 A G V SE + L R E + LT RE D+L +AQGL NK IA L Sbjct: 121 RAGAKGSKVFSERVNQYLRE--REMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVL 178 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 +I+E TVKVH++++L+K+ ++SRV A + Q+R Sbjct: 179 NISEQTVKVHIRNLLRKLNVRSRVAATILFLQQR 212 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 11/218 (5%) Query: 1 MSNQE-PATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLD 59 M+ P +L++DDHP+LR G+ L+ PD+ ++GEA++GE+ I + L PD++L+D Sbjct: 1 MTESPAPIGVLVVDDHPLLRDGLAALLGAQPDLRLLGEAADGEEAIACYQRLQPDVVLMD 60 Query: 60 LNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKA 119 L MP ++G+E + ++R RI+V + + V AL+ GA YLLKDM +L+ Sbjct: 61 LQMPRLDGVEAIVRIRALDPRARIIVLTTYRGDVRAVRALQAGASAYLLKDMLRHELVDT 120 Query: 120 LHQAAAG-EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIAR 178 + A G + A+ +AA + ++L+PRE ++L+ +A GL NK I Sbjct: 121 IRMVAGGRRAPIPPAVAASIAAHVVE---------DRLSPRETEVLRHVAGGLSNKRIGE 171 Query: 179 RLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 R+ I+E TVK H+K ++ K+ + R A + I Sbjct: 172 RMQISEQTVKAHMKSLMDKLGVGDRTHAVTQALRRGII 209 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 253 bits (647), Expect = 4e-66, Method: Composition-based stats. Identities = 92/213 (43%), Positives = 137/213 (64%), Gaps = 5/213 (2%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 S P ++++DDHP++R GV+QL+ + +VV EASNG + I LA PDLILLDLN Sbjct: 6 STTAPFRVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRSQPDLILLDLN 65 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 M G++GL+TL LR + + RI++ +VS+ DV + GAD YLLKD EPE LL + Sbjct: 66 MKGLSGLDTLKALRSEGIDARIIILTVSDARSDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 QAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLD 181 QAA G V SE+++ L + R+ + LT RE D+L+ + +G+ NK IA +L Sbjct: 126 QAAEGRSVFSESVSAYL-----STRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLH 180 Query: 182 ITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER 214 I+E TVKVH++++L+K+ ++SRV A V + + Sbjct: 181 ISEETVKVHIRNLLRKLNVRSRVAATVLYLEYK 213 >UniRef50_Q06YY8 Two-component system response regulator n=2 Tax=Streptomyces RepID=Q06YY8_9ACTO Length = 223 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 73/217 (33%), Positives = 121/217 (55%), Gaps = 6/217 (2%) Query: 6 PATILLIDDHPMLRTG-VKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +LL DD M+R G + DITVVGEA +G + I +A L PD+ L+D+ MP Sbjct: 2 TIKVLLADDQAMIRRGPCGSSWRTSRDITVVGEAEDGAEAIAMARRLRPDVCLVDIRMPK 61 Query: 65 MNGLETLDKLR--EKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 ++G+E L + + R++V + + +E V AL+ GA G++LKD P L++A+ Sbjct: 62 LDGIEVTRALAGPKAADPMRVIVVTTFDLDEYVYGALRGGAAGFVLKDAGPALLIEAVRA 121 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNKMIARR 179 A GE ++S ++T L L ++A + L+ R ++++ IA+G N+ IA Sbjct: 122 AYNGEALVSPSVTLRLLKHLNESQAMPRGGAARSSELSGRALEVVRAIARGRTNQEIAAE 181 Query: 180 LDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 L I+ STVK H+ + K+ +++R E AVW + R+ Sbjct: 182 LFISLSTVKSHLSGIQTKLGVRNRTEIAVWAWENRVV 218 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 252 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 65/210 (30%), Positives = 112/210 (53%), Gaps = 3/210 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++L DDH +++ G+K + ++ ++ G + +E L PD++LLD+NMP +N Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLELKPDVLLLDINMPNLN 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E L++L + S + +++ S+ + + VV ++K GA GY+LKD+ E+L+ A++Q A G Sbjct: 62 GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQG 121 Query: 127 EMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITEST 186 L + L + E + L+ RE D+LK IA G NK IA L I+ T Sbjct: 122 RSYLCPQASDRLLEQINE---APEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRT 178 Query: 187 VKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 V+ H + KK+ S Q+ + Sbjct: 179 VETHRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 252 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 60/211 (28%), Positives = 113/211 (53%), Gaps = 5/211 (2%) Query: 3 NQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNM 62 Q+ IL++DD P++ ++ L+ V A++G Q ++ E P+++L+D+ M Sbjct: 370 AQDKIHILIVDDQPIISDSLEFLLDKY-GFRV-SVANSGAQALKQCEERQPNVVLMDIQM 427 Query: 63 PGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQ 122 P MNG+ T+ K++ + +I++ + V A++ GA+GY+LK ++PE+L+ A+ Sbjct: 428 PKMNGITTMKKIKNRWPDTKIIMVTTFEETSSVSEAIEAGAEGYVLKSVQPEELVAAIRL 487 Query: 123 AAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDI 182 G +LS+ + L ++ +LTPRE D+L + +GL K IA +L + Sbjct: 488 VHLGGTMLSQDVATRLFKEYS---PMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFL 544 Query: 183 TESTVKVHVKHMLKKMKLKSRVEAAVWVHQE 213 +E TV+ + + K+++ R EA E Sbjct: 545 SEGTVRNYASSIYMKLQVSGRGEAVKKALDE 575 >UniRef50_C8VWU8 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VWU8_DESAS Length = 216 Score = 252 bits (646), Expect = 6e-66, Method: Composition-based stats. Identities = 60/204 (29%), Positives = 113/204 (55%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 +++ DD ++ G++ ++ PD+ VVG A NG++ +E + PD+ LLD++MP Sbjct: 2 SKIRVVIADDQNLICDGIRIILDSQPDMEVVGIADNGQKAVEFVSACQPDVALLDISMPV 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 M+G+E L +++ +++ + + +E ++ A + GADGYLLKDM E L+ A+ A Sbjct: 62 MSGIEALKEIKVNYPKTVVLMLTTFDPDEYIIGAFRSGADGYLLKDMTAEKLVVAIRNAF 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G + + ++ + + + LT RE +I L+A+G N++I+ L I+ Sbjct: 122 NGNVTMPASIASRIIVHIHEDVKKNSLQDYGLTQREIEIAGLMARGFSNELISITLGISL 181 Query: 185 STVKVHVKHMLKKMKLKSRVEAAV 208 TVK ++ + K++ SR EA + Sbjct: 182 GTVKNYISVIYSKLEANSRQEAIL 205 >UniRef50_D1V9H6 Two component transcriptional regulator, LuxR family n=2 Tax=Actinomycetales RepID=D1V9H6_9ACTO Length = 219 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 63/213 (29%), Positives = 112/213 (52%), Gaps = 3/213 (1%) Query: 7 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMN 66 ++++DD ++RTG+ ++ VV E ++G Q + L PDL+L+D+ MP ++ Sbjct: 2 IRVVIVDDQAIVRTGLARIFGAEDGFDVVAECADGAQAVATVTRLRPDLVLMDVRMPRLD 61 Query: 67 GLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 126 G+E +L ++ + + +E + ++ GA G++LKD EDLL A AAG Sbjct: 62 GIEATRQLCAAPEPPPVLALTTFDEDEVLWGVIEAGAQGFVLKDSTAEDLLAAARVVAAG 121 Query: 127 EMVLSEALTPVLAASLR---ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDIT 183 A+ P + + R A+R ++ LT RE D+L+L+A+G N IA+ L ++ Sbjct: 122 GAWFDPAVAPRMMRAYRGAVASRRREAARLDLLTAREHDVLRLLARGQVNAEIAQALRVS 181 Query: 184 ESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF 216 TVK H+ + +K+ ++ R A V+ I Sbjct: 182 PGTVKSHIGAIFEKLGVRDRAAAIVFAFDHGIV 214 >UniRef50_C1I7X4 Two-component system response regulator n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I7X4_9CLOT Length = 226 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 65/215 (30%), Positives = 130/215 (60%), Gaps = 3/215 (1%) Query: 4 QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMP 63 +++DDH ++R G+ ++IS D+ + G+ +GE+ + ++ +PD+ILLD+NMP Sbjct: 3 DNKIRTIVVDDHALIREGLNRIISFEEDLIICGQFRSGEELLNNMKNYNPDVILLDINMP 62 Query: 64 GMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQA 123 G NG+ETL L+ ++V+ +V N ++ ++ ++ GAD Y+LK+ +++ A+ Sbjct: 63 GKNGIETLKTLKILYPDIKVVMLTVENDKKTIMESIDIGADAYILKESAGSEIVNAIRNV 122 Query: 124 AAGEMVLSEALTPVLAASLRANRATTERDVNQ---LTPRERDILKLIAQGLPNKMIARRL 180 GE + ++L + ++++ A +++ LT RE +IL I++GL NK IA +L Sbjct: 123 YLGEKYIDKSLIKAIFLDIKSDVACKNKEIESLKLLTNRELNILYEISKGLKNKEIAEKL 182 Query: 181 DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 ++E TVK ++ + KK++++ RV+A ++ + I Sbjct: 183 FLSEKTVKNYITSIFKKIEVEDRVQATIYAIRNNI 217 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 252 bits (645), Expect = 6e-66, Method: Composition-based stats. Identities = 63/211 (29%), Positives = 115/211 (54%), Gaps = 8/211 (3%) Query: 5 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPG 64 ++L DDHP+ R G+K + ++ +VGEA++G++ +L E L PD+ LLD+ MPG Sbjct: 2 SKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEAWKLIEELKPDVALLDIRMPG 61 Query: 65 MNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAA 124 +G+ +++E L ++ + + ++ V+ +LK GA G++LK L+KA+ A Sbjct: 62 ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTVA 121 Query: 125 AGEMVLSEALTPVLAASLRANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITE 184 G + L + V+ E L+PRER++L A+GL +K +A +L I+E Sbjct: 122 TGSLFLDSEVASVV--------GAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISE 173 Query: 185 STVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TV+ H+ + K+ ++ EA + + + Sbjct: 174 RTVQTHLASVYDKLGAHNKTEAMLLALKHGL 204 >UniRef50_C5D120 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5D120_VARPS Length = 255 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 31/243 (12%) Query: 2 SNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLN 61 +L+ DD ++R G+ L+ APDI V+G+A++G + +ELA L PD++L+DL+ Sbjct: 13 QAAPKIRVLIADDQALIRRGMAMLLDAAPDIEVLGQAADGVEAVELARRLLPDVVLMDLH 72 Query: 62 MPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALH 121 MP G+ ++ R++V + + ++ V A++ GA YLLKD E++L + Sbjct: 73 MPRKGGVLATREISAALPHTRVMVLTTFDRDDLVFDAVRAGAQAYLLKDASEEEVLDTVR 132 Query: 122 QAAAGEMVLSEALTPVLAASLR-----------------------ANRATTERDVN---- 154 GE L+ + + R A + Sbjct: 133 AVHRGESRLTPQIARKVMDQFRLLADRVAQEPPSPPAPDPRAAAQAAAPGEPSPSDSMMT 192 Query: 155 ----QLTPRERDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWV 210 LT RE +L+LIA+G N+ IA L++ E T K HV +++K+ +R E AV V Sbjct: 193 MATKPLTEREAAVLELIAKGYGNRQIATALNLAEGTAKNHVSRIMQKLHANTRTELAVLV 252 Query: 211 HQE 213 ++ Sbjct: 253 LKK 255 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 95/210 (45%), Positives = 138/210 (65%), Gaps = 3/210 (1%) Query: 8 TILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNG 67 +LLIDDH + R G+++L+ I VG +GE GI+LA L PD+ILLD+ MP MNG Sbjct: 4 RVLLIDDHTLFREGLQELLKRH-GIDTVGAVGDGETGIDLARDLLPDVILLDMRMPAMNG 62 Query: 68 LETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGE 127 LE L +LR+ L IV+ + S E+D+V L+ GA GYLLK+MEP DL+ AL + G+ Sbjct: 63 LEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEILQGK 122 Query: 128 MVLSEALTPVLAASLR--ANRATTERDVNQLTPRERDILKLIAQGLPNKMIARRLDITES 185 V++ L +L ++ ++ A ++LTPRE +IL L+A+G NK+IAR L I++ Sbjct: 123 TVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGISDG 182 Query: 186 TVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 TVK+HVK +L+K+ + SRVEAAV Q+ + Sbjct: 183 TVKLHVKAILRKLGVHSRVEAAVLAVQQGL 212 >UniRef50_A5CSF7 Putative two-component system, response regulator n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CSF7_CLAM3 Length = 224 Score = 252 bits (645), Expect = 7e-66, Method: Composition-based stats. Identities = 67/222 (30%), Positives = 113/222 (50%), Gaps = 7/222 (3%) Query: 1 MSN-QEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLD 59 M++ P ++++DD ++R G +++ PD+ VG ++GEQ + L PD++L+D Sbjct: 1 MTDAPAPIRVVVVDDQSLVRDGFARIVDAQPDMAAVGVCADGEQAVARVVELRPDVVLMD 60 Query: 60 LNMPGMNGLETLDKLRE--KSLSGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLL 117 + MP ++G+E +L E ++ RI+ + + + + L+ GA G+LLKD L+ Sbjct: 61 VRMPVLDGIEATRRLVEGGRAEGTRILGLTTHDTDSYAIRMLRAGAVGFLLKDSTAVQLV 120 Query: 118 KALHQAAAGEMVLSEALTPVLAASLRANRATTERD----VNQLTPRERDILKLIAQGLPN 173 A+ G S + T L L R ++ LT RER + + G N Sbjct: 121 DAIRSVHNGTFAASMSTTQRLLERLAVERTAPPDPDTAALDVLTDRERVVFTRLVTGASN 180 Query: 174 KMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERI 215 IAR L I E TVK HV H+L K+ ++ RV +W H+ + Sbjct: 181 PEIARDLSIAEVTVKTHVGHILTKLAVRDRVHLVIWAHRRGL 222 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.218 0.787 Lambda K H 0.267 0.0668 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,378,001,074 Number of Sequences: 3077464 Number of extensions: 183108506 Number of successful extensions: 566942 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 42015 Number of HSP's successfully gapped in prelim test: 14510 Number of HSP's that attempted gapping in prelim test: 460417 Number of HSP's gapped (non-prelim): 65805 length of query: 216 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 93 effective length of database: 661,868,284 effective search space: 61553750412 effective search space used: 61553750412 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 92 (39.3 bits)