BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (720 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 1494 0.0 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 858 0.0 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 823 0.0 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 733 0.0 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 691 0.0 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 681 0.0 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 646 0.0 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 634 e-180 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 633 e-180 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 633 e-180 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 630 e-179 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 619 e-175 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 566 e-159 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 557 e-157 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 555 e-156 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 549 e-154 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 545 e-153 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 543 e-153 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 535 e-150 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 534 e-150 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 531 e-149 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 528 e-148 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 525 e-147 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 525 e-147 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 523 e-147 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 523 e-146 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 520 e-146 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 520 e-146 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 519 e-145 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 519 e-145 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 518 e-145 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 518 e-145 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 518 e-145 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 517 e-145 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 514 e-144 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 513 e-144 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 513 e-143 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 512 e-143 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 511 e-143 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 511 e-143 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 509 e-142 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 509 e-142 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 509 e-142 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 508 e-142 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 508 e-142 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 508 e-142 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 508 e-142 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 507 e-142 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 506 e-141 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 506 e-141 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 505 e-141 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 502 e-140 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 502 e-140 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 501 e-140 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 499 e-139 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 497 e-139 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 495 e-138 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 493 e-137 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 491 e-137 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 491 e-137 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 491 e-137 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 490 e-137 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 489 e-136 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 489 e-136 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 489 e-136 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 489 e-136 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 488 e-136 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 486 e-135 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 486 e-135 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 486 e-135 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 485 e-135 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 484 e-135 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 484 e-135 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 483 e-135 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 483 e-134 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 481 e-134 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 480 e-133 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 479 e-133 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 478 e-133 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 478 e-133 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 477 e-133 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 475 e-132 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 473 e-131 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 473 e-131 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 473 e-131 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 472 e-131 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 471 e-131 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 470 e-131 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 470 e-130 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 469 e-130 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 469 e-130 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 468 e-130 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 467 e-130 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 466 e-129 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 466 e-129 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 466 e-129 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 466 e-129 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 464 e-129 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 463 e-129 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 459 e-127 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 458 e-127 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 458 e-127 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 458 e-127 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 457 e-127 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 455 e-126 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 453 e-126 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 453 e-125 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 451 e-125 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 451 e-125 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 451 e-125 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 450 e-125 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 450 e-125 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 449 e-124 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 448 e-124 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 447 e-124 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 447 e-124 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 446 e-123 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 445 e-123 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 445 e-123 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 444 e-123 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 442 e-122 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 442 e-122 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 440 e-122 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 439 e-121 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 439 e-121 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 437 e-121 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 433 e-119 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 433 e-119 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 432 e-119 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 432 e-119 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 431 e-119 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 430 e-118 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 429 e-118 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 426 e-117 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 423 e-116 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 422 e-116 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 421 e-116 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 421 e-116 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 421 e-116 UniRef50_B7PH97 Uvrd / recb / pcra DNA helicase, putative n=1 Ta... 421 e-116 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 420 e-115 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 420 e-115 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 419 e-115 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 418 e-115 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 417 e-115 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 416 e-114 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 416 e-114 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 416 e-114 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 415 e-114 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 414 e-114 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 414 e-114 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 414 e-114 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 414 e-114 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 411 e-113 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 411 e-113 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 411 e-113 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 409 e-112 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 407 e-112 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 405 e-111 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 404 e-111 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 404 e-111 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 403 e-110 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 402 e-110 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 401 e-110 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 400 e-109 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 399 e-109 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 399 e-109 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 398 e-109 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 398 e-109 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 398 e-109 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 398 e-109 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 397 e-109 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 396 e-108 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 396 e-108 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 395 e-108 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 394 e-108 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 393 e-107 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 392 e-107 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 392 e-107 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 391 e-107 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 390 e-107 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 390 e-107 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 390 e-106 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 387 e-106 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 387 e-106 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 385 e-105 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 384 e-105 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 383 e-104 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 383 e-104 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 382 e-104 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 382 e-104 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 381 e-104 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 380 e-104 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 380 e-103 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 379 e-103 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 377 e-102 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 376 e-102 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 376 e-102 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 375 e-102 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 375 e-102 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 373 e-101 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 369 e-100 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 368 e-100 UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxyda... 367 e-100 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 367 1e-99 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 367 1e-99 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 364 7e-99 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 363 1e-98 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 363 1e-98 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 363 2e-98 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 362 4e-98 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 361 7e-98 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 359 2e-97 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 358 4e-97 UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4... 358 4e-97 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 354 6e-96 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 354 6e-96 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 353 9e-96 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 353 1e-95 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 352 2e-95 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 352 3e-95 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 350 1e-94 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 350 1e-94 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 348 3e-94 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 347 8e-94 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 346 2e-93 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 344 9e-93 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 343 1e-92 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 342 2e-92 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 341 7e-92 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 340 1e-91 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 340 1e-91 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 339 3e-91 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 337 1e-90 UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y... 334 7e-90 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 330 1e-88 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 327 8e-88 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 327 1e-87 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 327 1e-87 UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS 322 4e-86 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 320 9e-86 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 318 6e-85 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 317 1e-84 UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL 315 4e-84 UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosa... 314 7e-84 UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma Re... 314 9e-84 UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Ta... 310 9e-83 UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 310 2e-82 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 310 2e-82 UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerot... 309 3e-82 >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 1494 bits (3868), Expect = 0.0, Method: Compositional matrix adjust. Identities = 720/720 (100%), Positives = 720/720 (100%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV Sbjct: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL Sbjct: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA Sbjct: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT Sbjct: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN Sbjct: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS Sbjct: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ Sbjct: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL Sbjct: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY Sbjct: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG Sbjct: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV Sbjct: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/741 (55%), Positives = 549/741 (74%), Gaps = 25/741 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+S++L+ LND QR+AV + L+LAGAGSGKTRVLVHRIAWL V S Y+I+AV Sbjct: 1 MDISHILNDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA+EMR R+ L+G GM +GTFHG+A+RLLR H+ + LPQ FQILDS+DQ Sbjct: 61 TFTNKAASEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQK 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KRL+KA+ LD+ QWP +Q +IN +K+EG RPHHI NP + ++YQAY+E Sbjct: 121 RVIKRLLKALELDDAQWPHKQVQAFINGEKEEGRRPHHIDPGHNPYVRQMVQIYQAYEEQ 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C RAGLVDFAELLLRAHELWL P +L HY+ RF +ILVDEFQDTN++QYAW+R+LAG + Sbjct: 181 CKRAGLVDFAELLLRAHELWLKNPQVLAHYQARFRHILVDEFQDTNSLQYAWLRVLAGAS 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 G++ IVGDDDQSIYGWRGA++ENI+RF DF +T+RLEQNYRST IL AAN LI N Sbjct: 241 GRLFIVGDDDQSIYGWRGAKIENIRRFDEDFSDVKTVRLEQNYRSTGTILKAANGLIAFN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R+GK LW+ G +G+PI +Y AFNELDEAR+V N++++W + GG+ +E A+LYRSNAQS Sbjct: 301 QDRMGKNLWSAGEEGDPIRIYEAFNELDEARYVCNQVESWCEQGGSRSEVAVLYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+E+ALLQA +PYR+YGG+RF++R EIKD L+YLRL+ N DDAAFERV N P RGIG+ Sbjct: 361 RVMEQALLQAQIPYRVYGGLRFYDRAEIKDVLAYLRLLVNTEDDAAFERVYNHPPRGIGN 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +T D +R+ +R ++++LWQA ++ Q+ L RA +A+ F+ LI++L TA++ L Q Sbjct: 421 KTADQIREVARMQEISLWQAATQMAQD-GLTARAKTAVNGFLSLIESLKDSTAELTLQDQ 479 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL------------ 528 +VI SGL+ +E++ E+GQ+R+ENL+EL+ A F ++++ + Sbjct: 480 VIQVISRSGLQLHFEKDTSEQGQSRLENLDELINAVSVFKPVQDNDTVEGVVPEEAAMTE 539 Query: 529 --------MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 PL FL+ AALEAGE QAD W+ +VQLMTLH+AKGLEFP VF++G+EEG+F Sbjct: 540 AFDQPNFENPLAEFLAQAALEAGEQQADQWESSVQLMTLHAAKGLEFPLVFMIGLEEGLF 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 PSQ S ++ RLEEERRLAYVG+TRA ++L +++A RR++G E Y PSRFI E+P++C Sbjct: 600 PSQQSQEDPYRLEEERRLAYVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDC 659 Query: 641 VEEVRLRATVSR---PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 V+ VRL +V SH G + N+SG+++G+ V H KFGEGT++ EG+G+H+R Sbjct: 660 VQMVRLSGSVKHYGETASHANKGFAL-PNESGFRVGENVFHQKFGEGTVLGTEGAGDHAR 718 Query: 698 LQVAFQGQGIKWLVAAYARLE 718 +QV F G KWLVAA+A+LE Sbjct: 719 IQVNFTHAGTKWLVAAFAKLE 739 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/726 (57%), Positives = 533/726 (73%), Gaps = 13/726 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L LND QREAV P LVLAGAGSGKTRVL R A+L+ VE SP++I+AV Sbjct: 1 MPIDALTADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RIG+L+G + GMWVGTFHG+AHRLLR H A LP+ FQILD++DQL Sbjct: 61 TFTNKAAGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQILDADDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KR+++A DE ++PPRQ +I+++K+EG RP + G +Q VY Y++A Sbjct: 121 RVVKRVLRARGNDESRFPPRQVRGFISARKEEGERPSDVTEAGGDYQQELLAVYHDYEQA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C R GLVDF+ELLLRA+EL + P +L HY+ RF +ILVDEFQDTN +QY W++LL G+ Sbjct: 181 CRRGGLVDFSELLLRAYELLRDDPELLGHYQRRFAHILVDEFQDTNALQYRWLKLLGGEQ 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGA+VENI+ F + +RLEQNYRST IL AAN LIE+N Sbjct: 241 SELFVVGDDDQSIYGWRGARVENIEHFRREMGDVRVVRLEQNYRSTGTILDAANRLIEHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQ 359 +GRLGK+LWTDG GEPI+LY AFNE+DEAR+VV+RI+ + GG A+ AILYRSNAQ Sbjct: 301 SGRLGKQLWTDGWSGEPITLYAAFNEVDEARWVVDRIRQLSEEGGYGHADFAILYRSNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE L A +P+R+YGG+RFFER E+KDAL+YLRL+ANR+DDA+FERVVNTP RGIG Sbjct: 361 SRALEHELHAARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDDASFERVVNTPPRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 +T+D VR +R+ +++W+A REL +ALA RA +AL F+E IDAL E D PLH Sbjct: 421 AKTVDAVRYAAREADVSMWRAARELTGSRALAARARNALASFLERIDALDSELTDRPLHD 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE-DLMPLQAFLSHA 538 Q ++VI + LR +E++ + R+ENL+ELVTA R F+ +E E DL PL AFL+HA Sbjct: 481 QVEQVIARTDLRRHHERD-----EARLENLDELVTAARTFAQRDEPEDDLDPLAAFLTHA 535 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 ALEAGEGQAD W+ +VQLMTLHSAKGLEFP VF+VGMEEG+FP +MS++E GRLEEERRL Sbjct: 536 ALEAGEGQADDWEHSVQLMTLHSAKGLEFPVVFLVGMEEGLFPHRMSVEEPGRLEEERRL 595 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR-PVSHQ 657 YVG+TRA Q+L LT+AE RRL+G + RPSRF+ E+P E +EEVR R +V R P S Sbjct: 596 CYVGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRPRMSVRRGPPSVP 655 Query: 658 RMG-----TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 G P G LG RV H +FG+G +++ EGSG ++RLQV F G KWL+A Sbjct: 656 ASGGSGSSLPADAPPEGLSLGSRVHHPRFGDGVLLHCEGSGPNARLQVRFDSAGTKWLIA 715 Query: 713 AYARLE 718 A LE Sbjct: 716 GRAGLE 721 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/728 (53%), Positives = 496/728 (68%), Gaps = 37/728 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND+QREAV P LVLAGAGSGKTRVL+ RIA L+ E P I+AVTFTNKAA Sbjct: 21 LNDQQREAVLLPPGPALVLAGAGSGKTRVLISRIAHLLE-EGVRPAEILAVTFTNKAARS 79 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R+ L+ +W+GTFHG+AHRLLR H LP DFQ+LDS+D RL++R ++ Sbjct: 80 MRERLAALVQVDLAPLWMGTFHGIAHRLLRRHAEALGLPADFQVLDSDDSQRLVRRALRE 139 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-----YGNPVEQTWQKVYQAYQEACDRA 184 + LDEKQW PR I KDEG P + + + PV+ VY+ Y+ +R Sbjct: 140 LGLDEKQWTPRALAAQIGRWKDEGWTPAQVPAREVGRWTIPVQ-----VYERYERIKERG 194 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 GLVDFA+LLL A LW ++ IL+HYRERF ++LVDEFQDTN +QY W+R LA G++ Sbjct: 195 GLVDFADLLLYALRLW-DQDGILEHYRERFQHVLVDEFQDTNAVQYTWLRRLAAH-GRLF 252 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY WRGA+VEN+ RF DFPGA +RLEQNYRS++ IL+AANA+I +N RL Sbjct: 253 VVGDDDQSIYAWRGARVENLLRFAEDFPGAALVRLEQNYRSSAPILAAANAVIAHNAERL 312 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 GK LWT GEP+ LY A+NE DEARFVV +I+ W GG +CAILYRSNAQSRV E Sbjct: 313 GKTLWTAQDGGEPLELYAAYNEEDEARFVVAQIQQWVAQGGRREDCAILYRSNAQSRVFE 372 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L++ +PYR+YGG+RFFER EIKD L+YLRL NR+DDA+FERVVN PTRGIG+ TL+ Sbjct: 373 EILVREGVPYRVYGGLRFFERAEIKDVLAYLRLCRNRHDDASFERVVNLPTRGIGNVTLE 432 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASA-LQRFMELIDALAQETADMPLHVQTDR 483 +R +R++ L+LWQA AG+AAS L F+ L+D LA E A L R Sbjct: 433 RLRLQAREQGLSLWQA----------AGQAASPKLNAFLTLVDGLAAEIAGDELDAAVQR 482 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE---DLMP-----LQAFL 535 VI+ +GLR Y ++ G++ + R+ENL+EL+ A R +++ EE E +L P L FL Sbjct: 483 VIEVTGLRDWYARD-GDRNEGRLENLDELINAARAYAFVEEREALRELNPDPGNRLSEFL 541 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +HAALEAGEG +D W+DAVQLM+LHSAKGLEFP VF+VG+EEG+FP Q SL++ L EE Sbjct: 542 THAALEAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGLEEGLFPHQRSLEDADGLAEE 601 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRAM++L L YAE+RRL+G E PSRF+ +LP + V E+R RA + RPV Sbjct: 602 RRLCYVGMTRAMRRLVLCYAESRRLHGSERASLPSRFLRDLPSDLVRELRPRARIRRPVV 661 Query: 656 HQRMGTP---MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 +P D Y LG R+RH FGEGT+++ E SG R+QV F G KWL Sbjct: 662 PTATLSPRQGSAARDLPYPLGSRIRHPVFGEGTVLDYEASGRQGRIQVRF-ASGAKWLAL 720 Query: 713 AYARLESV 720 LE + Sbjct: 721 GVVALEHL 728 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/727 (47%), Positives = 491/727 (67%), Gaps = 16/727 (2%) Query: 1 MDVSYLLDSLNDKQREAVA-APRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M++S + + LNDKQ ++V N L+LAGAGSGKTRVL HRIA+L++ ++ +I+A Sbjct: 1 MNLSEITNDLNDKQCQSVTFNNEKNALILAGAGSGKTRVLTHRIAYLITQKDIRIDAILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 VTFTNKAA EMR R+ L+ MW+GTFH LAHRLLR H+ + L FQILD++DQ Sbjct: 61 VTFTNKAATEMRERLSTLLRRPIQSMWMGTFHSLAHRLLRTHYEKSKLTSGFQILDAQDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 R++KRL+K ++DE ++P ++ W+IN+QK+E +R I N + +V++ Y+ Sbjct: 121 FRIVKRLMKENSIDESKFPIKKVQWFINNQKNEDIRAQDIDPDYNYFIKKNLEVFELYEA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C L+DFAELL+R++EL N +L HY+ RF +ILVDEFQDTN +QY WI+LL Sbjct: 181 YCQENDLIDFAELLIRSYELLKNNTDLLNHYQARFEHILVDEFQDTNTVQYKWIKLLFNG 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 K+ VGDDDQSIYGWRGA++ENI + DF ETIRL+QNYRST NIL+A+NALI + Sbjct: 241 HNKIFCVGDDDQSIYGWRGAKIENITKLCTDFTPIETIRLKQNYRSTGNILNASNALITH 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R+GK LWTD +GE I +Y A E DEA +V++ I+ NG + ++C+ILYR NAQ Sbjct: 301 NVNRMGKSLWTDAGNGELIDVYEARTETDEANYVISNIQKLITNGASPSDCSILYRFNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+ EEAL++ ++PY IYGG++FFE EIKDALSYLRLI N D+ AFERVVN PTRGIG Sbjct: 361 SRIFEEALIKYNIPYIIYGGLKFFEYTEIKDALSYLRLIENSADNVAFERVVNFPTRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + T+ +R ++D +L+QA ++ L RAA+AL F+ LI + +T + L Sbjct: 421 NVTVKKIRTFAQDNHTSLFQAAIQI--SSILPTRAANALSSFINLIKQITDDTKHLNLSE 478 Query: 480 QTDRVIKDSGLRTMYEQEK-GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + ++ SGL Y +K G K ENL++L+T T+Q+++ E+D + + F+S Sbjct: 479 KVTNLLNTSGLIMHYSNDKIGSKK----ENLKKLITITKQYNH-EQDNKMSEVMGFISLT 533 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L++ + VQLMT+HSAKGLEFP VF+VGMEE +FPS+ S +E +EERRL Sbjct: 534 SLDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEEDLFPSRQSKNEPHLTDEERRL 593 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR--ATV---SRP 653 YVG+TRAM+KL+L+YA R LYG+ +Y PSRF+ E+P + + +++ + AT+ + Sbjct: 594 CYVGMTRAMKKLSLSYAIKRFLYGQSLYAYPSRFLNEIPSKYLNKIKAKFGATIQNYNDD 653 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + + TP ++D +G V+HAKFG GT++N EG G+ +R+Q+ F+ G KWL+ + Sbjct: 654 NTFNKNITP--KSDDQISIGALVKHAKFGLGTVLNFEGQGDSTRVQIKFKQVGTKWLINS 711 Query: 714 YARLESV 720 YA LE + Sbjct: 712 YANLEFI 718 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/751 (49%), Positives = 482/751 (64%), Gaps = 42/751 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LL LN +Q EAV P + L+LAGAGSGKTRVL RIA+L+ P +++AVTF Sbjct: 1 MTALLTDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM RI ++ + GMW+GTFHGL HR+LRAH+ DA LPQ FQILD DQL + Sbjct: 61 TNKAAREMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +KR++K +LDEK PRQ W+IN+ K+EGLR + + G+ +T + YQ Y+ Sbjct: 121 IKRILKERSLDEKVLAPRQLQWFINNAKEEGLRASQVDTRGS-FNRTLAECYQVYEAVSM 179 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQ-HYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R G VDFAELLLR +EL L++ IL+ HYR RF +ILVDEFQDTN +QY WI+LLAG Sbjct: 180 RGGTVDFAELLLRCYEL-LSRNEILRDHYRGRFEHILVDEFQDTNRLQYQWIKLLAGSGS 238 Query: 242 K----VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + VGDDDQSIY +RGA V N++ DF + IRLEQNYRS NIL AANALI Sbjct: 239 QQHAAIFAVGDDDQSIYAFRGAHVGNMRDLEKDFSVPKIIRLEQNYRSQGNILDAANALI 298 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 ENN GRLGK LWT GE + +Y A ++DE F+V+ IK G +L+E A+LYRSN Sbjct: 299 ENNKGRLGKNLWTAAGKGESVRIYYAATDVDETSFIVDEIKALHAEGLSLSEIALLYRSN 358 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRVLE L AS+ YR+YGGMRFF+RQE+K AL+YLRL+A+ +DD A RV+N P RG Sbjct: 359 AQSRVLEHGLFNASISYRVYGGMRFFDRQEVKHALAYLRLVASPDDDNALLRVINFPPRG 418 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQ-EKALAGRA---ASALQRFMELIDALAQETA 473 IG RTL+ ++ + +LWQA ++ + KA+ R + F+ L+ ++ Q Sbjct: 419 IGARTLEQLQDQAEILGTSLWQAALKVCEGRKAVTTRGDQPGRGIAGFVNLVLSMQQACE 478 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 PL RV+ SGL Y+ E+ E R+ENL+ELV A F + ED+ L A Sbjct: 479 GQPLPEIIRRVVDQSGLVAHYQAER-EGNNERLENLKELVNAATSFVHEAEDDSLT---A 534 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL+HA+LE GE QA+ +QDAVQLMT+H+AKGLEF VFI G+EEG+FP + S +E LE Sbjct: 535 FLAHASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRNEPNGLE 594 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA----- 648 EERRL YV +TRA Q+L L+YAE+R L+G+ + PSRF+ E+PEE ++ +R Sbjct: 595 EERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKRLRSSGFSGAG 654 Query: 649 -----------TVSRPVSHQRMG-----------TPMVENDSGYKLGQRVRHAKFGEGTI 686 TVS S Q G P N +G +GQ+V H KFG GTI Sbjct: 655 YRQGLSGTGQNTVSTAYSRQGRGKHTPVSAAVRVAPQGLNTAGLHIGQQVSHTKFGTGTI 714 Query: 687 VNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 VN EG+G R+QV F G KWL YA+L Sbjct: 715 VNYEGNGSDMRVQVNFHQTGTKWLSLTYAKL 745 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/740 (44%), Positives = 483/740 (65%), Gaps = 28/740 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN +Q++A N L+LAGAGSGKT+VL RIA+L + S +I+AVTFTNK Sbjct: 6 FLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAVTFTNK 65 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA E++HR+ +++G S GMW+GTFHG+AHRLLR H + L ++F+ILD ++Q +L+K+ Sbjct: 66 AAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQAQLIKK 125 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 +IK+++LD+K++PP+ +IN QKD+ +R + + + + +Y AY+E Sbjct: 126 VIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTK---QYDINYTHIYTAYEERLLLDN 182 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DFA+LLL +EL+ + ++Y+ F IL+DEFQDTN +QY W++LL D +M Sbjct: 183 ALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDNNYMMA 242 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA V+NI +++ D E I+LEQNYRST NIL AN++I+NN+ R+ Sbjct: 243 VGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNNDNRMS 302 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+LW+ DGE + +YCA NE DEA++++++I+ D G ++ AILYRSN SRVLEE Sbjct: 303 KELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLSRVLEE 362 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 + + S+PYRIYGG RFF+R E+KDAL+YLRL ND+ AFER++NTPTRGIG++TLD Sbjct: 363 SCIYTSIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGNKTLDT 422 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 +R S+ ++ WQA +++Q++ + R AS L +F+E+I+A++ + D+ L + VI Sbjct: 423 IRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKLLETVI 482 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE--DEDLMPLQAFLSHAALEAG 543 +SGL Y+++ EK + +I+NL+EL++A + F E D++ LQ FLS A LEAG Sbjct: 483 NESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFAVLEAG 542 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP--SQMSLDEG----------GR 591 E QAD D+VQLMT+H++KGLEF VF+V EEG+FP S ++ +E + Sbjct: 543 EMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESKKIQEK 602 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA-TV 650 L EERRL YV VTRAM+ LT++YA+ R ++G+ + SRF+ E+ E + E +L + Sbjct: 603 LAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKLTVGSQ 662 Query: 651 SRPVSHQRMG---TP---MVENDS---GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 ++P Q+ +P + ND+ +K G +V H FG+G V + G V Sbjct: 663 NKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKEFYTVD 722 Query: 702 F-QGQGIKWLVAAYARLESV 720 F G K L+A A L V Sbjct: 723 FGVDVGQKILLADIANLVKV 742 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust. Identities = 327/720 (45%), Positives = 460/720 (63%), Gaps = 19/720 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN KQ+EAV + L+LAGAGSGKT+VL R AWL+ + SP I+AVTFTNKAA E Sbjct: 16 LNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASPGGILAVTFTNKAAKE 75 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M RI + + GMWVGTFHGL +R L+ H+ DA+LPQ FQILDS DQ +KR++K Sbjct: 76 MLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQIFQILDSADQKSAIKRVMKK 135 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 MN+DE P ++ +++IN K+EG+R + +++ + E+ +Y+AY++ C + G+VDF Sbjct: 136 MNIDEDFLPSKEVLYFINGNKEEGVRSNAYKAFDDISEKK-NAIYKAYEDQCLKEGVVDF 194 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 AELLLR EL+ NKP I +HY+ F +ILVDEFQDT+ +QY W++LL + VGDD Sbjct: 195 AELLLRCLELFQNKPMIREHYQSIFKHILVDEFQDTSKLQYEWLKLLTAKNSFIFAVGDD 254 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIYG+RGA+ N++ DF I+LEQNYRS +NIL+AANA+IENN RLGK LW Sbjct: 255 DQSIYGFRGARPGNMKDLQKDFKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKNLW 314 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQ 369 ++ DG+ I Y A ++ E ++++ IK +G + AILYR+NAQSRV+E A++ Sbjct: 315 SEAGDGDLIRQYNALDDRFETSYILDEIKGLHRSGSRYDQIAILYRNNAQSRVIEMAMVS 374 Query: 370 ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQT 429 ++PYR+YGG+RFFER EIK +L+YLRLI N+ DD AF R++N P RGIG + L++++ Sbjct: 375 NNIPYRVYGGLRFFERAEIKSSLAYLRLITNKKDDTAFLRIINFPPRGIGAKALELIQDV 434 Query: 430 SRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSG 489 + +++LWQ+ + E + + F+ LI + + + D + S Sbjct: 435 ANAEKISLWQSAERIESEN-----KNTKISFFVHLIRHIEDQIEGNNIDESIDFINSYST 489 Query: 490 LRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEE-------DEDLMPLQAFLSHAAL 540 L+ Y ++K G +RIENL+ELV+A + + + EE D L FL +L Sbjct: 490 LKDHYGKDK--DGSSRIENLDELVSAAKAYINEFREENTENESGDSKASILSDFLDFTSL 547 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 E+GE QA DA+QLMT+HS+KGLEF VFI G+EEG+ P + SL E LEEERRL Y Sbjct: 548 ESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPHERSLSENNGLEEERRLMY 607 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V VTRA QKL LT A++R YG+ +Y+ PSRF+ E+P E V+ + S +S ++ Sbjct: 608 VAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEIPNELVKRINAPKK-SFAISTAKIA 666 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 T E +K+G V HAKFG G + EG+ R+Q+ F G+KWL YA+L + Sbjct: 667 THS-ETKHAWKIGAAVEHAKFGVGIVTGYEGNENDLRVQINFHSYGVKWLAMEYAKLAEI 725 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 633 bits (1633), Expect = e-180, Method: Compositional matrix adjust. Identities = 325/723 (44%), Positives = 486/723 (67%), Gaps = 11/723 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++L +LNDKQ+E + + N+LVLAGAGSGKT+VL ++IAWL+ V+ SIMAV Sbjct: 1 MKNNFLTKNLNDKQKEIITSSYKNILVLAGAGSGKTKVLTNKIAWLIDVKKYHSSSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNK A E+ +R+ L+ + +W+GTFHGL+++LL H+ ++ L ++FQI+DSEDQL Sbjct: 61 TFTNKGAKEIINRMKFLIKNLKD-IWIGTFHGLSYKLLCMHYTESKLFKNFQIIDSEDQL 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQE 179 +L+ ++ +M L+ + YI + KD+G+RP + + N + K+Y+ YQ Sbjct: 120 KLIHQINLSMKLNFNNKSYHNILEYIRNYKDKGIRPSFCEININNKKNILYNKIYKEYQT 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 CD+ GL+DF+ELLLR +EL++N I + Y+++F ILVDEFQDTN+IQY+WI+ + Sbjct: 180 TCDKLGLLDFSELLLRINELFINNKSISKFYKKKFKYILVDEFQDTNDIQYSWIKNFSSK 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +MIVGDDDQSIYGWRGA+ EN++ F+NDF + I+L+QNYRST+NIL AAN+LI N Sbjct: 240 ECFIMIVGDDDQSIYGWRGAKSENMKNFINDFSRTKIIKLQQNYRSTNNILQAANSLIMN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 NN R+GKKLWT+ G+ I++Y A+NE DE+ F++ I + E AILYR N+ Sbjct: 300 NNLRIGKKLWTEKKSGDLITIYQAYNEKDESNFIIKYILNNQKKLNNKKKEYAILYRKNS 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LEE LL+ ++ Y IYGG++FF RQEIK+ L+Y RLI N+ DD ++ER++N P R I Sbjct: 360 QSRSLEENLLKNNLKYDIYGGLKFFSRQEIKNTLAYFRLIVNKKDDLSYERIINFPKRKI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TL ++ S++++L+LW++ ++ L + +L+ F LID L + ++ LH Sbjct: 420 GEKTLKKIKNISKNKKLSLWESTNFFIKNN-LNDAKSFSLKNFFYLIDYLKENIKNLSLH 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + + VIK SGL YE+EK +RI+N +ELV + +QF + E +++ L+ FL+ + Sbjct: 479 EKFNFVIKKSGLLNFYEKEKKNINNSRIDNWQELVNSAKQF-FIENNKEKNILEKFLAFS 537 Query: 539 ALEAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 LE+ + D ++LMTLHS+KGLEFP VFI+GMEEG+FP+ + + +LEEERR Sbjct: 538 TLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIGMEEGLFPNIIYSNNKEKLEEERR 597 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 LAYVG+TRAM+KL +TY + R +YGK + PSRFI E+P + + T + + Sbjct: 598 LAYVGMTRAMKKLVITYVKYRNIYGKIIKREPSRFIEEIPSHYKKIIYENKTNTSKNEIK 657 Query: 658 RMGTPMVENDS--GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 + N++ Y++G++V H KFG G I+++E ++ L++ F+ GIK LVA YA Sbjct: 658 KDNYYYTTNNTKNNYEIGKKVFHPKFGFGLIIHIE---KNKILEIKFKKIGIKKLVAKYA 714 Query: 716 RLE 718 RLE Sbjct: 715 RLE 717 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust. Identities = 356/796 (44%), Positives = 482/796 (60%), Gaps = 90/796 (11%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL +LND+Q AV P + L+LAGAGSGKTRVL RIAWL+ SP SI+AVTFTNK Sbjct: 31 LLQNLNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNK 90 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ ++ + GMW+GTFHGL +RLLRAHH A LP FQILD++DQL +KR Sbjct: 91 AAKEMTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQILDTQDQLSAVKR 150 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 L K N+DE+++PP+Q ++I+ K+EGLRP + + + + +YQ Y+E C R G Sbjct: 151 LCKQFNIDEERFPPKQMAYFISGCKEEGLRPGDVDARDADGRKKVE-LYQLYEEQCQREG 209 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT----- 240 +VDF EL+LR++EL + I HY+ RF +ILVDEFQDTN +QYAW++ +AGD Sbjct: 210 VVDFGELMLRSYELLRDNDPIRAHYQRRFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRL 269 Query: 241 ---GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V+ VGDDDQSIY +RGA+V N+Q F+ +F I+LEQNYRS SNIL +ANALI Sbjct: 270 VTHGSVLAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRSYSNILDSANALI 329 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRS 356 +N+ RLGK L T GEP+ +Y A +L EA+++V+ I+ N G E A+LYRS Sbjct: 330 SHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWMVDEIRQLARNDGFERREIAVLYRS 389 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSRV+E AL A++PYR+YGG+RFFER EIK AL+YLRL+ N +DD +F RVVN P R Sbjct: 390 NAQSRVIESALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFMRVVNFPPR 449 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG RT++V++ +R +L A A+ G+A + L F+ ++D + ++T Sbjct: 450 GIGARTVEVLQDAARQAGCSLHDAV------SAVPGKAGANLGAFVAMVDVMREQTQGQT 503 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE------------- 523 L ++++ SGL Y EK +G R+ENL+EL+ A F E Sbjct: 504 LRGIIGQMLESSGLVEHYRAEK--EGADRLENLDELINAAESFVTQEGFGRDAVALPVDE 561 Query: 524 --------------------------------EDEDLMPLQAFLSHAALEAGEGQADTWQ 551 E L PL AFL+HAALEAG+ QA Q Sbjct: 562 HGASLRQSPASQGIDPSLPVVDEPLPGGVDADTGETLSPLAAFLTHAALEAGDNQAQAGQ 621 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLT 611 DAVQLMT+H++KGLEF VFI GMEEG+FP + S+ + LEEERRL YV +TRA ++L Sbjct: 622 DAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLY 681 Query: 612 LTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT---VSRPVSHQRMG-------- 660 L++++TR L+G+ Y+ SRF ELPE ++ + + P S R G Sbjct: 682 LSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQGFGSFAPQSGGRGGSAGTPWGG 741 Query: 661 -----------TPMVENDS-----GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 +P V G ++G V H KFGEG ++++EGSG+ +R QV F Sbjct: 742 FGSGGKSETFASPPVPAQKAPPAHGLRVGLAVFHTKFGEGKVLSLEGSGDDARAQVNFPR 801 Query: 705 QGIKWLVAAYARLESV 720 G KWL + A+L V Sbjct: 802 HGTKWLALSVAKLTVV 817 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust. Identities = 351/795 (44%), Positives = 485/795 (61%), Gaps = 88/795 (11%) Query: 4 SYLLDSLNDKQREAVAAPRSN-------LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYS 56 S LL +LN +QREAV P N L+LAGAG GKTRVL RIAWL+ SP Sbjct: 3 SDLLANLNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSPIG 62 Query: 57 IMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 ++AVTFTNKAA EM R+ ++ + GMW+GTFHGL +RLLRAHH +A LP FQILD+ Sbjct: 63 VLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQILDT 122 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQA 176 +DQL +KRL+K + +D++++P +Q ++I K+ G R + S G+ + ++Y A Sbjct: 123 QDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRAKDL-SVGDDFQAKMAQLYAA 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E C R G+VDFAELLLR++EL + I HY+ERF +IL+DEFQDTN +QYAW++LL Sbjct: 182 YDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKLL 241 Query: 237 AGD-----------TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 +G + V VGDDDQSIY +RGA VEN++ + + ++LEQNYRS Sbjct: 242 SGHDASSINVSGMGSSSVFAVGDDDQSIYAFRGADVENMRLYEKQYHPL-MVKLEQNYRS 300 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 +IL AN LI NN+ RLGK L TD GEP+ +Y A ++ EA ++V+ IK ++G Sbjct: 301 HGHILDTANHLIANNSERLGKNLRTDADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGI 360 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+LYRSNAQSR++E AL A +PYR+YGG+RFFER EIK AL+Y RL+ N NDD Sbjct: 361 KRTEVALLYRSNAQSRIIEHALFSAGIPYRVYGGLRFFERAEIKHALAYSRLLENPNDDT 420 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 +F RVVN PTRGIG R+++V++ +R +Q +L+ A L G+A +AL F+ L+ Sbjct: 421 SFSRVVNFPTRGIGARSIEVLQDAARAQQCSLYLAA------STLEGKAGAALGGFVRLV 474 Query: 466 DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF----SY 521 D + + T L + VI+ SGL Y E+ +GQ R+ENL+EL+ A F Y Sbjct: 475 DHMREATRHNTLPETVEFVIQHSGLIQHYLSER--EGQDRVENLQELINAATAFIAEEGY 532 Query: 522 NEEDEDLM-------------PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFP 568 ++ M PL AFLSHA+LEAG+ QA QDAVQLMT+HSAKGLEF Sbjct: 533 GQDAAAAMLSGENAPGVAEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFT 592 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VFI G+EEG+FP + S++E LEEERRL YV +TRA ++L L++ ++R L+G+ Y+ Sbjct: 593 SVFITGLEEGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNM 652 Query: 629 PSRFIGELPEECVEEVRLRATVSR------------------------------PVSHQ- 657 PSRF+ ELP + ++ + +A +R HQ Sbjct: 653 PSRFLEELPSDSLKWLTPKARDARWGGGNLRSGSTRQDGYTRQREYESNDFFDSGSDHQR 712 Query: 658 ---RMGTPMVE---------NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 R+G+ +E + + +GQ V H KFGEG + +EG +R QV F+ Sbjct: 713 PAKRVGSASMEVKRLISPPRGNYPFTIGQNVFHTKFGEGHVTGLEGVDADARAQVNFKRH 772 Query: 706 GIKWLVAAYARLESV 720 GIKWL + A+L ++ Sbjct: 773 GIKWLQLSIAKLVAI 787 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 335/721 (46%), Positives = 462/721 (64%), Gaps = 14/721 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ +L LN QR+AV + V+AGAGSGKTRVLV R+ WLM+V C PY ++A+ Sbjct: 1 MNIDTILSGLNAAQRDAVTTKERIVRVIAGAGSGKTRVLVQRMQWLMTVAGCMPYQLLAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ Q S +W+GTFH + R+LR + + F ++DS+DQL Sbjct: 61 TFTNKAAQEMRQRLEQSAACSLNQLWMGTFHSICLRILRQYAELVGWEKSFIVIDSDDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL+KRL++ N +E+ + IN+ K+ GLR + + P+E YQ Y+ Sbjct: 121 RLIKRLLQKNNWNEEILSAKAVQAQINAYKENGLRAADLPTSAPPLEIAVHHFYQEYEHI 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + G +DFAELLL EL + Q + +RF IL+DEFQDTN +Q+ + L Sbjct: 181 TRQQGTMDFAELLLLTTELLAQHETVQQRFHQRFQAILIDEFQDTNTLQFKLVTQLCAPE 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGAQ+++I +P TIRLEQNYRST IL+AANA+I +N Sbjct: 241 TQLFVVGDDDQSIYGWRGAQIDHIVHLERYYPTVHTIRLEQNYRSTKTILAAANAVIAHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RLGK LW+DG GE I+LY A NE DEAR++V I + +GGA +CAILYRSNA S Sbjct: 301 QTRLGKTLWSDGKHGEAIALYAAVNEYDEARYLVENIAQFHQHGGAYDQCAILYRSNALS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EEAL+Q ++PYRIYGG+RFFER EIKDAL+YLRL+ +DDAA ER++N P RGIG Sbjct: 361 RIYEEALIQKNIPYRIYGGLRFFERAEIKDALAYLRLLHYPDDDAALERIINQPPRGIGA 420 Query: 421 RTLDVVRQTSRDRQLTLWQACR-ELLQEKALAGRAASALQRFMELIDALA--QETADMPL 477 +T++ VR ++ Q +LW+ + L E+ + RA +AL++F LI + E +D L Sbjct: 421 KTMEDVRLLAQRVQCSLWRVITDDALLEQKCSARAQNALRQFRALIIKMTAFAERSD-SL 479 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 V+ +SGL E+ + R ENL EL+ A + ++ D D + FL+ Sbjct: 480 RDILKMVVDESGLYAALTNNNQEETENRRENLHELIAAG-DYQSDQNDADHDKIADFLAM 538 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 A+L+AG+ + + VQLMTLHSAKGLEF +V++V +EEG+FP+ SL+ +LEEERR Sbjct: 539 ASLDAGDKETNA--HGVQLMTLHSAKGLEFNRVYMVALEEGLFPNARSLENSAQLEEERR 596 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 LAYVG+TRA ++LT+++AE RR YG++ Y RPSRF+ E+P E + V RPV Sbjct: 597 LAYVGITRAREQLTMSFAERRRYYGQDNYARPSRFLNEIPPELLNMV-------RPVLFN 649 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 R ++ D+ +K G V+HA+FG G I +EGSGEH R V F G KWLV AYA+L Sbjct: 650 RTQPNDIQEDNPWKTGVCVQHAQFGTGVIQAVEGSGEHQRALVKFTTVGEKWLVLAYAKL 709 Query: 718 E 718 + Sbjct: 710 K 710 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 305/725 (42%), Positives = 435/725 (60%), Gaps = 24/725 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LN Q+ AV +LVLAGAGSGKTRVL HRIA+L+ + SPY I+A+TFTNKAA Sbjct: 21 TLNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITFTNKAAK 80 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM+ R+ L+G +WV TFH R+LR ++F I D+ DQ L+K +K Sbjct: 81 EMKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIYDTTDQQVLMKDCLK 140 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPV-EQTWQKVYQAYQEACDRAGL 186 NLDEK + PR + I KD + P+ +++ +GN Q ++Y+ YQ+ Sbjct: 141 KFNLDEKLFQPRMILNEIGRAKDLLIGPNEYLEEFGNDFRNQKIAEIYRLYQDRMKSNNA 200 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L+++ +L+ P +L++Y+ +F ILVDEFQDTN QY I LLA G + +V Sbjct: 201 LDFDDLIMKTVQLFQTHPTVLRYYQNKFKYILVDEFQDTNMAQYTLISLLAKSHGNLCVV 260 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA + NI F DFP + ++LEQNYRST +IL AAN ++ NN R K Sbjct: 261 GDDDQSIYGWRGADIRNILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSK 320 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEE 365 KLWTD DGE I Y A NE DEA F+ I K ++ +E AILYR+NAQSR LEE Sbjct: 321 KLWTDNQDGEIIQYYRANNEYDEASFISGTIEKLNEEENRPYSEFAILYRTNAQSRALEE 380 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L++ ++PY+IY G RF++R+EIKD L+YLR I N DD + +R++N P RGIG +++D Sbjct: 381 MLMKRAIPYKIYSGTRFYDRKEIKDILAYLRTIENPVDDVSVKRIINVPKRGIGIKSIDR 440 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + + + A + Q + R +F ELI +L +M + + Sbjct: 441 FDEYAEGKNESFFGALLHVDQMPDQSTRVKVQTNKFTELIQSLRDRQDEMSVTDIVKEIY 500 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 + +G E + ++RIENL+E ++ T+ F +E+ ++ L+ FL+ +LE Sbjct: 501 EKTGYIDALMAEDKIEAESRIENLQEFLSVTKDF---DENSEVKTLEEFLARTSLETTLD 557 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 + D ++ V LMTLHSAKGLEFP VFI GMEE +FPS MSL E LEEERRL YVG+TR Sbjct: 558 ENDE-ENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQENN-LEEERRLCYVGITR 615 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------------EVRLRATVSRP 653 A +KL +++A TR LYG+ + SRF+GE+PEE ++ E++ + Sbjct: 616 AREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRKRDLKEMQTSPLFTGA 675 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + HQ+ G N K G +V+H KFG GT+V++ G L +AF GIK + + Sbjct: 676 MMHQKKGNANSINSDAIKAGNKVKHPKFGVGTVVSVAG----EMLTIAFPNSGIKKIAST 731 Query: 714 YARLE 718 + +LE Sbjct: 732 FIQLE 736 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 305/753 (40%), Positives = 457/753 (60%), Gaps = 43/753 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 +ND+Q+EAV + LL++AGAGSGKTRVL HR+A++++ E P++I+A+TFTNKAA E Sbjct: 1 MNDRQKEAVQHTQGPLLIMAGAGSGKTRVLTHRMAYILAEEEVHPWNILAITFTNKAARE 60 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ R+ QL+G MWV TFH + R+LR + F I D +Q +KR++K Sbjct: 61 MKERVSQLVGPQAEDMWVSTFHSMCVRILRRDIELLGYQRSFTICDPSEQQTAMKRILKK 120 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 +++D +++ R + I+ K++ + Y VEQ K Y+ YQ+ ++ +D Sbjct: 121 LDIDSEKYDYRMILNRISQAKNDLEDVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLD 180 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +L++ +L+ P LQ+Y+++F I VDE+QDTN+ QY + +LA + +VGD Sbjct: 181 FDDLIMLTVQLFQKHPETLQYYQQKFQYIHVDEYQDTNHAQYRLVTMLAKKFKNICVVGD 240 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DQSIYGWRGA + NI F D+ A+ + LEQNYRST IL AAN +IENN R KKL Sbjct: 241 ADQSIYGWRGADMSNILEFEKDYQNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKL 300 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALL 368 WT+ +G+PI+ Y A +E DE R+V+++I++ +G + AILYR+NAQSRV+EE LL Sbjct: 301 WTENEEGQPITYYRAQSEQDEGRYVLSQIQSLLRDGYHYDDFAILYRTNAQSRVMEENLL 360 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 ++++P+R+ GG RFFER EIKD L+YLRLI N DD +F R+VN+P RGIG +LD + Sbjct: 361 KSNIPFRLVGGQRFFERLEIKDLLAYLRLIVNPQDDLSFRRIVNSPKRGIGATSLDKLND 420 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDS 488 + Q +L +A ++ L+G+AA AL++F E+I+ L + + + ++VI+ + Sbjct: 421 FASMHQFSLLEASSQIAI-SPLSGKAAKALEKFAEMIEDLRKMQEFLSISEFVEQVIEKT 479 Query: 489 GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN--EEDEDLMPLQAFLSHAALEAGEGQ 546 G EQ+ + RIEN++E ++ +QF + EE+ + PL FL+ +L + Sbjct: 480 GYLAALEQQHTMEADARIENIQEFISVAKQFEQDRLEEESEDSPLLQFLTDLSLVSDADS 539 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLAYVGVTR 605 D V LMTLH+AKGLEFP VFI+G+EEG+FPS S+ E G +EEERRLAYVG+TR Sbjct: 540 DDGDGRMVTLMTLHAAKGLEFPVVFIIGLEEGIFPSLRSIMENGDDVEEERRLAYVGITR 599 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---------------------- 643 A QKL LT A +R LYG+ +RPSRF+ E+ E+ + Sbjct: 600 AEQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGEDLFDSKQQQSYSYTSRESSSFTSKTSS 659 Query: 644 ---------VRLRATVSRPVSHQ-------RMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 + +AT +P + Q R T + + +K+G +V H K+ GT+V Sbjct: 660 SGSLFDKYRAKSQATAYQPKAVQPSSIQPVRKQTVTANDGAVWKVGDKVMHKKWNVGTVV 719 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G + + VAF G GIK L+A++A +E + Sbjct: 720 KVTGEGTNQEIDVAFAGMGIKRLLASFAPIERI 752 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 332/756 (43%), Positives = 453/756 (59%), Gaps = 48/756 (6%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L LN+KQREAV A +LV+AGAGSGKT VL RIA+L++ P++I+A+TFT Sbjct: 8 SDILKGLNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFT 67 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--AHHMDANLPQDFQILDSEDQLR 121 NKAA EM RI +L+G +W TFH + R+LR HH+ F +LD+ DQ+ Sbjct: 68 NKAAREMEERIERLVGPVASDIWTSTFHAMCARILRRDIHHL--GYTSAFTVLDAADQVS 125 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVEQTWQKVYQAYQE 179 L++RL++ MN+D +++ PR + I+ K+E LR + G+P ++ VY AY+ Sbjct: 126 LVRRLMQEMNIDVRKFEPRAVLHAISQHKNE-LRSAEKALDLAGSPYDKMVGDVYLAYER 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +DF +LL++ EL+ P +L +Y+ RF++I VDE+QDTN+ QY ++LLA Sbjct: 185 RLRENQALDFDDLLVKTVELFRKVPDVLAYYQHRFSHIHVDEYQDTNHAQYVLVKLLAER 244 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQSIYGWRGA + NI F D+P A IRLEQNYRST IL AN +I++ Sbjct: 245 RRNLCVVGDSDQSIYGWRGADIRNILEFQRDYPDARVIRLEQNYRSTGRILRIANQVIQH 304 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N RL K LWTD +GE L+ A +E EA +V + I NG + AILYR+NAQ Sbjct: 305 NQMRLEKNLWTDRGEGEKAKLFVAPDERVEADWVADEIARMVANGREYRDVAILYRTNAQ 364 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRVLEEA LQ +PYRIYGG+RF+ER+E+KD ++YLRLIAN NDD +F RVVN P RGIG Sbjct: 365 SRVLEEAFLQRGIPYRIYGGLRFYERREVKDVIAYLRLIANPNDDVSFLRVVNVPKRGIG 424 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 D TL+ + + +R R +L++A L E ++ +AASALQ F+ELI L + A +PL Sbjct: 425 DTTLEKLAEYARHRGTSLFEAALHAL-EAGISKKAASALQSFVELIQTLQLQRAFLPLTD 483 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP------LQA 533 TD ++ SG R E+ + + R+ENL+E ++ TR+F DED +P L+ Sbjct: 484 LTDELLDRSGYREALRAERSLEAENRLENLDEFLSLTREF-----DEDGVPDGEMGALEQ 538 Query: 534 FLSHAA------LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 FL+H A L G D V +MTLH+AKGLEFP VF+VG+EEG+FP + +LD Sbjct: 539 FLTHVALVSDADLPGGRPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGVFPHRRALD 598 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV--- 644 G LEEERRL YVG+TRAM++L LT +R L+G+ PSRF+ E+P +E Sbjct: 599 GGEELEEERRLCYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDIERAGEE 658 Query: 645 ---------RLRATV-------SRPVSHQRMGTPM---VENDSGYKLGQRVRHAKFGEGT 685 RA V + S RM P + Y+ G V H K+G G Sbjct: 659 DAMFGWGWRDARAGVRAPAHAVADAASGPRMSVPRSFGADLSVPYEPGDLVEHRKWGRGV 718 Query: 686 IVNMEGSGEHSRLQVAFQGQ-GIKWLVAAYARLESV 720 IV G GE L V F+ G K L A +A + V Sbjct: 719 IVAKSGEGESLELVVRFEDPIGEKRLFAKFAPIHKV 754 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 549 bits (1414), Expect = e-154, Method: Compositional matrix adjust. Identities = 290/726 (39%), Positives = 436/726 (60%), Gaps = 16/726 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ +N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+++A+TFTNK Sbjct: 4 LLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ +L+G +W+ TFH + R+LR + ++F I+D DQ ++K Sbjct: 64 AAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKD 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRA 184 ++K N+D K++ PR + I++ K+E P Q Q VY YQ R Sbjct: 124 VLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRN 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L++ L+ P +L++Y+ +F I VDE+QDTN QY ++LLA + Sbjct: 184 EALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIYGWRGA ++NI F D+P A TI LEQNYRST IL+AAN +I+NN+ R Sbjct: 244 VVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT +GE I Y A E DEA FV+ I Q NG + AILYR+NAQSRVLE Sbjct: 304 PKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E ++++MPY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RG+G +++ Sbjct: 364 ETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVE 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 V+ + ++++ A E L+ + F ELI +L +E + +H D V Sbjct: 424 KVQNYALQNNISMFDALGE-ADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEV 482 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 ++ SG R M E+E + ++R+EN++E ++ + + N E+ L FL+ +L A Sbjct: 483 LQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEE-QSLINFLTDLSLVADI 541 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVG 602 +ADT ++ V LMT+HSAKGLEFP VFI+GMEE +FP ++ G ++EERR+ YV Sbjct: 542 DEADT-ENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEGDHEMQEERRICYVA 600 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------EVRLRATVSR 652 +TRA + L +T+A +R L+G+ + PSRF+ E+PE +E + + + R Sbjct: 601 ITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKR 660 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 S + T + S + +G +V H +GEG + N+ L + F+ QG K L+A Sbjct: 661 GFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLA 720 Query: 713 AYARLE 718 +A +E Sbjct: 721 QFAPIE 726 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 545 bits (1404), Expect = e-153, Method: Compositional matrix adjust. Identities = 290/723 (40%), Positives = 443/723 (61%), Gaps = 14/723 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ ++N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+I+A+TFTNK Sbjct: 4 LVKNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+G +W+ TFH + R+LR + ++F I+D DQ ++K Sbjct: 64 AAKEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKD 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRA 184 ++K+ N+D K++ PR + I++ K+E P Q N Q VY+ YQ R Sbjct: 124 VLKSENIDSKRFEPRMFIGAISNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQLSRN 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L++ L+ P L++Y+ +F I VDE+QDTN QY ++LLA + Sbjct: 184 EALDFDDLIMTTINLFERVPETLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLANKFKNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIYGWRGA ++NI F D+P A+TI LEQNYRST NIL+AAN +I++N+ R Sbjct: 244 VVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKHNSERK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT + G+ I Y A E DEA +VV I Q +G +E AILYR+NAQSRVLE Sbjct: 304 PKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMKHQRSGKKYSEMAILYRTNAQSRVLE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E +++++PY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RGIG +++ Sbjct: 364 ETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVPKRGIGPSSVE 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 ++ + ++++ A E + L+ + F E+I L +E + + D V Sbjct: 424 KIQTYALQNNISMFDALAE-VDFIGLSKKVTQECISFYEMIQNLIKEQEFLEISEIVDEV 482 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 ++ SG R M ++E+ + ++R+ENL+E ++ + + N E+ L FL+ +L A Sbjct: 483 LQKSGYRDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEE-QSLINFLTDLSLVADI 541 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLAYVG 602 +ADT Q+ V LMT+HSAKGLEFP VFI+GMEE +FP ++ ++ +EEERR+ YV Sbjct: 542 DEADT-QNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMEEERRICYVA 600 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV--RLRATVS------RPV 654 +TRA + L +T A TR L+G+ + PSRF+ E+PE+ ++ + R T+S R Sbjct: 601 ITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPKRGF 660 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 S + T + S +K+G +V H +GEG + N+ L + F+ +G K L+A + Sbjct: 661 SKRTTSTKKQVSSSDWKVGDKVMHKAWGEGMVSNVNEKNGSVELDIIFKSEGPKRLLAQF 720 Query: 715 ARL 717 A + Sbjct: 721 API 723 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust. Identities = 317/745 (42%), Positives = 433/745 (58%), Gaps = 39/745 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLND QR+AV LL+LAGAGSGKTR L HRIA+L+ + P+ ++AVTF Sbjct: 1 MSDLLTSLNDCQRQAVLHEDGPLLILAGAGSGKTRTLTHRIAYLIQQQQVEPWQVLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAAAEMR R+ L+G G +W+ TFH R+LR +DF I D +DQ RL Sbjct: 61 TNKAAAEMRERLQSLVGNIDG-LWISTFHAACARILRRDGEVLGYGRDFTIYDDQDQQRL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +K + + + EK PR I+ K+ GL P + EQ +VY+ YQ+ Sbjct: 120 IKDCLAQLRITEKDLKPRAVATAIDQAKNRGLLPEEYIPGDHRGEQV-ARVYELYQKRLQ 178 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +A +DF +LLL+ L+ HI YR RF ++LVDEFQDTN +QYA ++ LA D Sbjct: 179 QANALDFGDLLLQTVRLFREYSHIRDAYRRRFAHLLVDEFQDTNQVQYAMVKALADDGRH 238 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIY WRGA++ NI F DFPGA IRLEQ+YRS++ IL AA ++ N G Sbjct: 239 LCVVGDDDQSIYAWRGAEIGNILNFERDFPGASVIRLEQHYRSSATILEAAGEVVACNIG 298 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R GK LWTD GEP++L ++L+EARFV I +D G L + A+ YR+NAQSRV Sbjct: 299 RKGKTLWTDNPAGEPLTLEPLPDDLEEARFVAAEIARLRDAGRHLRDVAVFYRTNAQSRV 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE L++ +PY + GG++F+ R EIKD L+YLR +AN D + R+VN P+RGIG T Sbjct: 359 LEETLVREGLPYVMVGGVKFYARMEIKDVLAYLRALANPADSLSARRIVNVPSRGIGAVT 418 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + + ACR L+ L G AA + F ++ AQ ++P T Sbjct: 419 TGRIAEHEEEAG-GFLAACRLCLERGVLKGAAAKKVAAFSAFMERFAQRMTEVPFPQLTA 477 Query: 483 RVIKDSG----LR-----TMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 ++++SG LR M E E+ E + R+ENLE+L+ + E LQ Sbjct: 478 DLLEESGYAPNLREEAQSAMTEGERKE-AKGRLENLEQLLAGMEEHQATESS-----LQE 531 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 +L AL DT D V LMTLH+AKGLEFP VF+ GMEEG+FP + E +E Sbjct: 532 YLEQVALVTDLDSYDTRLDRVTLMTLHAAKGLEFPVVFMTGMEEGIFPHGRAAGERDDVE 591 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YVG+TRAMQKL LT+A RR+YG Y+ PSRF+ E+P + + + + +P Sbjct: 592 EERRLCYVGMTRAMQKLYLTHARRRRIYGDYQYNAPSRFLAEIPPHLMGD-KPAPALQKP 650 Query: 654 VSH-------QRMGTPMVENDS-------------GYKLGQRVRHAKFGEGTIVNMEGSG 693 +H Q TP E++ G ++G VRH KFG G + +EG+G Sbjct: 651 ATHNLASVFEQIEPTPFEESEDFFEDVQVVPEAEEGLRVGLHVRHVKFGVGVVRRLEGNG 710 Query: 694 EHSRLQVAFQGQGIKWLVAAYARLE 718 + ++ V F G G+K L+ +A LE Sbjct: 711 DQQKVIVQFPGVGLKKLLVKFAGLE 735 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 301/722 (41%), Positives = 440/722 (60%), Gaps = 24/722 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q+EAV + LLVLAGAGSGKTRVL +R+A L+ E P +I+AVTFTNKAA E Sbjct: 11 LNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQ-EGVRPENILAVTFTNKAAQE 69 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAH-HMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ L+G + G+WV TFH R+LR H+ P +F I D++DQ LK ++K Sbjct: 70 MKERLEGLVGEAARGLWVSTFHSACVRILRREAHLLGYRP-NFVIYDTDDQQAALKEVLK 128 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 ++LD+K++PPR I+ K++ P + EQ ++Y+ YQE + Sbjct: 129 ELDLDDKKYPPRSLAQVISMAKNDLKTPERFLDGAATFREQQQGQIYRRYQEKLRELNAM 188 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+++ LW P +L++Y++R+ +ILVDE+QDTN+ QY +RLLAG + +VG Sbjct: 189 DFDDLIMQTVFLWQQNPLVLRYYQQRWQHILVDEYQDTNHAQYILVRLLAGKGDNLCVVG 248 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 D DQ IYGWRGA + NI F DFP A I LE+NYRST IL AANA+I++N GR K+ Sbjct: 249 DPDQGIYGWRGADIGNILAFEEDFPRARVILLEENYRSTRPILQAANAVIQHNEGRREKR 308 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEA 366 LWT +GE + LY A +E DE RF+ + + Q G ++ A+LYR++AQSR LEEA Sbjct: 309 LWTRRREGELLHLYRATDERDEGRFIAGEVYRRHQQEGRPFSDFAVLYRTHAQSRALEEA 368 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 +QA +PY I GG++F++R+EIKD L+YLR+IAN +D + R++N P RGIG+ TL + Sbjct: 369 FIQAGVPYEIVGGLKFYQRKEIKDILAYLRVIANPDDSLSLLRIINVPRRGIGEATLARL 428 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 + +L++ + + R AL+ +E++D L Q+ + + +++ Sbjct: 429 EAAATSEGESLYRVLERVDTIPGIPARGRQALRELVEMLDNLRQQQEKITVTDLVATILQ 488 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 ++G + E E+ + Q R+ENL+E T TR + + L FL+ AL A + Sbjct: 489 ETGYQAELEAERTPEAQARLENLKEFQTVTRSYDQGAPESS---LGDFLTQVALVA---E 542 Query: 547 ADTWQD--AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 +DT+ AV LMT+H+AKGLEFP VF+ G+EEG+FP SLD+ +EEERRL YVG+T Sbjct: 543 SDTYSGNAAVALMTMHTAKGLEFPVVFLAGLEEGVFPHFRSLDDPAEMEEERRLCYVGMT 602 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV--EEVRLRATV---------SRP 653 RA + L LT+A TR LYG + + PSRF+ E+P + + E LR+ V R Sbjct: 603 RAREVLYLTHAWTRNLYGSTMSNPPSRFLDEIPADLIQGEGTGLRSGVLSRTSEERDDRG 662 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 S +R P + +++G +V+H +G G IV + G G+ + + VAF G+GIK L Sbjct: 663 RSTRRQPAPARSTRASWQVGDKVQHDAWGLGVIVKISGEGDDAIISVAFPGRGIKQLALR 722 Query: 714 YA 715 YA Sbjct: 723 YA 724 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust. Identities = 311/759 (40%), Positives = 446/759 (58%), Gaps = 54/759 (7%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 Y L+ LN QR+AV LL+LAGAGSGKTRVL +RIA L++ + P+ I+A+TFTN Sbjct: 2 YRLEDLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIA-QGVEPWHILAITFTN 60 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLP---QDFQILDSEDQLR 121 KAA EMR R+ L+G+ G+WV TFH R+LR+ LP + F I DS DQL Sbjct: 61 KAAQEMRDRVYSLVGSEGRGLWVATFHSACVRILRSEI--GYLPGYSRSFVIYDSGDQLA 118 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+K +K +NLDEK++ PR I+ K++ L P + EQ ++VY+ Y + Sbjct: 119 LIKSCMKELNLDEKKFAPRAIEAVISDAKNKLLTPEDFSRRAKDYFEQKAERVYELYLKK 178 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF ++++ L+ P +L Y+++F ILVDE+QDTN+ QYA + LLA Sbjct: 179 LLANNALDFDDIIMLTVRLFRENPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLLAKKY 238 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY +RGA V+NI F D+P A+T++LEQNYRST +IL AAN++++NN Sbjct: 239 RNLCVVGDDDQSIYMFRGADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSVVQNN 298 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQ 359 R K LWT+ DG+PI Y A NE DEAR++ RI+ + G E A+LYR+NAQ Sbjct: 299 TERKEKSLWTENEDGQPIVYYVADNEHDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQ 358 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRV+EE ++ +PYRI+ G++F+ER EIKD L+YLR++ N D +F RV+N P RG+G Sbjct: 359 SRVIEERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVPKRGLG 418 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLH 478 + TL+ + + ++++ + A E L RA L F L+ L A A+ + Sbjct: 419 ESTLEKILDYANEQEMPVLDAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVT 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED----------ED- 527 + V+K +G +K + + R+ENL E ++ T ++ ++ ED Sbjct: 479 KLVEEVLKRTGYWDNLVSDKSPEAEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDA 538 Query: 528 LMP-LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L+P L FL +L A D DAV +MT+HSAKGLEFP VF+ GMEEG+FPS S+ Sbjct: 539 LVPGLTGFLEQVSLVAQIDSLDQADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSM 598 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 + L EERRL YV +TRA ++L L YA+ R LYG+ Y+RPS F E+P + + Sbjct: 599 LDPVLLAEERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHVLVD--- 655 Query: 647 RATVSRPVS--------------------------HQRMGTPMVENDSG--YKLGQRVRH 678 R + P + + +G P V++ G YK+G++V H Sbjct: 656 RDPIDPPPTRAQKAHSAAARPAATPSGGPSPWRTGERTIGNP-VQDAPGVDYKVGEKVEH 714 Query: 679 AKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 AKFG+G IV ++G G + L V F G+ IK L+A YARL Sbjct: 715 AKFGKGVIVAIKGEGSSAELSVVFGGE-IKKLMAEYARL 752 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 296/727 (40%), Positives = 423/727 (58%), Gaps = 15/727 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L LN Q EAV LL+LAGAGSGKTRVL HRIA L+ E SP++I+A+TFTNK Sbjct: 13 ILAGLNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITFTNK 72 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ ++ +WV TFH ++LR QDF + D D+ L+K Sbjct: 73 AALEMRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTLIKD 132 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGL-RPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 IK +N+D+K + P+ I+ K++ + + + N + Q +Y+ YQ+ Sbjct: 133 CIKELNIDDKTFSPQYVSSIISKAKNKLIDEDKYDREADNILTQKAAGIYKLYQKKLKTY 192 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +LL L+ P++L+ Y+ +F ILVDE+QDTN +QY +++LA + + Sbjct: 193 NAVDFDDLLFLVVRLFKEHPNVLERYQHKFRYILVDEYQDTNYVQYLLVKMLAQKSRNLC 252 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ IYGWRGA ++NI F D+P A + LEQNYRST NIL AAN +I N GR Sbjct: 253 VVGDPDQGIYGWRGADIQNILSFERDYPEACVVTLEQNYRSTQNILDAANHIISYNQGRK 312 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVL 363 K+LWTD G PI + + +E EAR VV +IK G + +ECA+LYR++AQSRVL Sbjct: 313 EKRLWTDAGKGSPIIVCKSRDEFAEARHVVEQIKHLHLVEGVSYSECAVLYRTHAQSRVL 372 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE +L+ +PY I GG+RF+ER+EIKD ++YLR+I N D+ + R++N P RGIGD +L Sbjct: 373 EEIMLRYGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVPRRGIGDVSL 432 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + A Q L G+A L+ ++ +P+ T Sbjct: 433 TKIFAFAAEAGIPAGLAMEMAEQIPGLNGKARKQAALLGSLLQVWRRQQEFLPVTDLTVD 492 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +++ +G R E E + +TR+ENLEE ++ TR + + L FLS +L Sbjct: 493 ILERTGYRQELEYEGTVEARTRLENLEEFLSVTRLYDLETVEG---TLGEFLSELSLVTD 549 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + + + V +MTLH+AKGLEFP VF+V MEEG+FP +L + G LEEERRLAYVG+ Sbjct: 550 ADRDNGEAERVNMMTLHTAKGLEFPFVFLVAMEEGIFPHNRALSDAGELEEERRLAYVGM 609 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV-------EEVRLRATVSRPVSH 656 TRA QKL L+Y+ R +YG Y RPSRF+ E+P + V E ++ V + Sbjct: 610 TRARQKLYLSYSFQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEERQKINTQVKKQQET 669 Query: 657 QRMGTPMVENDSG---YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + V+ + + LG +V HAK+G G IV + G G ++ LQVAF G+K L A Sbjct: 670 SKRNQTTVKKPAAGQNFVLGDKVHHAKWGTGVIVGVSGLGSNAVLQVAFPDMGVKSLSAG 729 Query: 714 YARLESV 720 YA LE + Sbjct: 730 YAPLEKI 736 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 298/767 (38%), Positives = 444/767 (57%), Gaps = 52/767 (6%) Query: 1 MDV-SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MDV ++ +LN Q++AV LL+LAGAGSGKTRVL HR+A ++ + I+ Sbjct: 1 MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC 60 Query: 60 VTFTNKAAAEMRHRIGQLM----GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILD 115 VTFTNKAA EM HRI +++ Q +W+ TFH R+LR H + F I D Sbjct: 61 VTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYD 120 Query: 116 SEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVY 174 S DQL +K+++ A+++++K +P + I+S K GL P ++ S ++Q +VY Sbjct: 121 SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY 180 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 +AY+ +A +DF +LLL+ ++L+ P +LQ Y+++F I+VDE+QDTN+IQY ++ Sbjct: 181 KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ 240 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +LA + +VGD+DQSIY WRGA ++NI F DF A+ I+LE+NYRS++NI++ A Sbjct: 241 MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT 300 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAIL 353 A+I+NN+ R K L+T G+ I + NE +E RFV I++ + G G+ + AI Sbjct: 301 AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIF 360 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRVLEE L +PYR+ GG+RF+ER EIKD +SYL+L N DD A +R++N Sbjct: 361 YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALKRIINV 420 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG T++ + + + + L++++A + +E+ ++RF++L+ L Q Sbjct: 421 PARGIGKTTIEKIEEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQ 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + L V+ + ++++ + Q RIENLEEL A QF +E L + Sbjct: 481 HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFVQERGEES--TLIS 538 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGR 591 FL AL D Q++V +MTLH +KGLE+P VF+VG+EE +FPS S D Sbjct: 539 FLEEMALVNDVDSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQD 598 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 +EEERRLAYVG+TRA QKL LTYA+ RR++G+E ++ PSRFI E+P+ ++ + + Sbjct: 599 VEEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLID---FKTSAE 655 Query: 652 RPVSHQRMGT----------------------------------PMVENDSG----YKLG 673 P R G+ P END + G Sbjct: 656 APRFMARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYENDGAGSAPFSKG 715 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RVRH FG GT+ EG+GE+ ++ V F +K V YARLE V Sbjct: 716 MRVRHPTFGVGTVYATEGTGENFKVSVMFTDNTVKKFVVKYARLERV 762 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 316/786 (40%), Positives = 432/786 (54%), Gaps = 75/786 (9%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN+ QR AV + LL++AGAGSGKTRVL HRIA L++ I+A+TFTNK Sbjct: 36 LVAGLNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAITFTNK 95 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR RI +L+G S MW+ TFH L R+LR L +F I DS D LRL+ + Sbjct: 96 AAAEMRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLRLITQ 155 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI---QSYGNPVEQTWQKVYQAYQEACD 182 + K LD K++ P+ I++ K+E + S +P E +VY+ Y + Sbjct: 156 VAKQHELDPKRFAPKAIQHRISALKNELVDDETCLARASSTDPFESAVAQVYRGYTQRLR 215 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR-LLAGDT- 240 A +DF +L+ ++ P +L++YR RF ++LVDE+QDTN+ QYA +R L+ GD+ Sbjct: 216 AANAMDFDDLIGETVHMFRAFPQVLEYYRRRFRHVLVDEYQDTNHAQYALVRELVGGDSP 275 Query: 241 ----------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNIL 290 ++ +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST NIL Sbjct: 276 GHTDESGIPPAELTVVGDSDQSIYAFRGADIRNITDFERDFPAARTIMLEQNYRSTQNIL 335 Query: 291 SAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAE 349 SAANA+I N R KKLWT DG PI Y A NE +EARF+ I QD G + Sbjct: 336 SAANAVISQNADRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEIDRLQDEHGIRPGD 395 Query: 350 CAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFER 409 A+ YR+NAQSR LEE L++ +PY++ GG RF+ER+EIKDA+SYLR IAN DD R Sbjct: 396 VAVFYRTNAQSRSLEEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDITVRR 455 Query: 410 VVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA 469 +VN P RGIGDR + + ++ +A L + LA R+A+A++ F +L+D L Sbjct: 456 IVNEPKRGIGDRAQGSIAALADREGISFSEAMHRLDEAPGLATRSANAIRTFAQLMDDLG 515 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM 529 + + + V++ SG + ++R+ENL ELV R+F E+D Sbjct: 516 ELAQGASVTAVLEAVLEQSGYLEALRTSTDPQDESRVENLAELVAVVREF---EKDRPEA 572 Query: 530 PLQAFLSHAAL------------EAGEGQADTWQDA-----------VQLMTLHSAKGLE 566 L FL H AL A EG A Q A V LMTLH+AKGLE Sbjct: 573 GLGEFLEHVALVADADQIPSRPDTAAEGTASAQQIAQEVEEARDQGVVTLMTLHTAKGLE 632 Query: 567 FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY 626 FP VF+ GME G+FP Q S + +EEERRLAYVG+TRA Q+L +T AE+R L+G+ + Sbjct: 633 FPVVFLTGMEHGIFPHQRSFADPSSMEEERRLAYVGITRARQRLYITRAESRSLWGQSQF 692 Query: 627 HRPSRFIGELPEECVEEVRLRATVS----RPV-------------------------SHQ 657 + S F+ E+P ++ R A S PV + + Sbjct: 693 NPASPFLDEIPAHLIDWKREGAAASGGWGSPVHAGSGGGTRDPLRGSSWGAGAGSGATFR 752 Query: 658 RMGTPMVEND---SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 R+ VE + +G V H FG G++V +EGSG+ + +V F G K L+ Y Sbjct: 753 RLSPSRVEPNREIPSLSVGDAVEHKAFGRGSVVALEGSGDKTVAKVRF-GAEEKRLLLRY 811 Query: 715 ARLESV 720 A + V Sbjct: 812 APMTKV 817 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 315/789 (39%), Positives = 440/789 (55%), Gaps = 96/789 (12%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 +D LN Q AV +L+LAGAG+GKTR L RIA LMS P I+AVTFTNKA Sbjct: 31 MDGLNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTFTNKA 90 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+G L+G GM W+GTFH + +LLR H A L +F ILD++DQ RL+K+ Sbjct: 91 AREMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTRLMKQ 150 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRA 184 LI A +D+K+WP R I+ K+ L P + S + K+Y YQ Sbjct: 151 LIIAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSADHGAFNHQGVKLYAQYQARLKAL 210 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LLL +++ + +LQ Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 211 NACDFGDLLLHVIQIFQDNDDLLQQYQRWFRYILVDEYQDTNVAQYLWLRLLAAGHKNIC 270 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+ +I N GRL Sbjct: 271 CVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTGHILAAASGVIAGNTGRL 330 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA-----ECAILYRSNAQ 359 GK LWTDG DGE + L ++ +EAR++ I+ + AIL R++ Q Sbjct: 331 GKTLWTDGEDGEKVRLIGHWDGDEEARWIGEEIEAMGKGTRGMEPIGPNSIAILVRASHQ 390 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 R E+ L +PYR+ GG RF+ER EI+DA++Y R++ + +DD AFER+VNTP RG+G Sbjct: 391 MRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPDDDLAFERIVNTPKRGLG 450 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI-------------- 465 D+ +++ +R ++L + R ++ +A+ G+ L+ ++ + Sbjct: 451 DKAQQTIQRMARSNGVSLLEGARLCVETQAIGGKGGRELRTLVDGLARWRIQLTGALRAA 510 Query: 466 ---DALAQETAD---MP--LHVQTDRVIKD-SGLRTMYEQEKGEKGQTRIENLEELVTAT 516 D L +E AD +P H++ +I D SG + ++ +K +G R+ENL+ELV A Sbjct: 511 GPSDDLIEEDADPSEVPKISHIELAEIILDESGYTSHWQNDKTPEGPGRLENLKELVKAL 570 Query: 517 RQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 F LQ FL H +L + + D + V LMTLH+AKGLEFP VF+ G E Sbjct: 571 ENFEN---------LQGFLEHVSLIM-DNEQDDQEPKVTLMTLHAAKGLEFPAVFLPGWE 620 Query: 577 EGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG 634 +G+FPSQ S+DE G+ LEEERRLAYVG+TRA + T+++A RR+YG+ PSRFI Sbjct: 621 DGLFPSQRSMDESGQAGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFID 680 Query: 635 ELPEECVE----------EVRLRATVSRPVS--------HQRMGTPMVENDSGYK----- 671 ELPE+ VE + + AT S PV H++ + V N G++ Sbjct: 681 ELPEDHVEVLTPPGLYGHQGSVSATAS-PVEREMAGSNLHEKAASADVYNSPGWRRLQAR 739 Query: 672 --------------------------LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 +G RV H KFG G +V++EG +L + F Sbjct: 740 QGQYGTRQPSEAKAMTIDAEAISAFTVGDRVFHQKFGYGEVVSVEG----DKLGIEFDKA 795 Query: 706 GIKWLVAAY 714 G K +V + Sbjct: 796 GSKHVVGRF 804 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust. Identities = 292/646 (45%), Positives = 400/646 (61%), Gaps = 25/646 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I+AVTFTNKA Sbjct: 69 LDGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFTNKA 128 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI ++G + GM W+GTFH + R+LR HH L F ILD++DQLRLLK+ Sbjct: 129 AREMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRLLKQ 188 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-----YGNPVEQTWQKVYQAYQEA 180 LI A +DEK+WP R I+ K+ GL P + + + N Q +Y AYQ Sbjct: 189 LIAAEEIDEKRWPARMLASAIDGWKNRGLTPEQVPAGEGAAFAN---GRGQMLYAAYQAR 245 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +LLL L+ P +L Y +F ILVDE+QDTN QY W+RLLA + Sbjct: 246 LKALNAVDFGDLLLEGIRLFRENPDVLAEYHRKFKYILVDEYQDTNVAQYLWLRLLAQGS 305 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V VGDDDQSIYGWRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI N Sbjct: 306 RNVCCVGDDDQSIYGWRGAEVDNILRFESDFPGAKVIRLERNYRSTGHILAAASHLIAFN 365 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 GRLGK L+++G GE +++ A++ +EAR + + I+ Q G AL++ AIL R++ Q Sbjct: 366 EGRLGKTLFSEGEKGEKVTVTGAWDSGEEARAIGDEIEALQRAGHALSQIAILVRASFQM 425 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + + YR+ GG RF+ER EI+DAL+YLR + + DD AFER+VN P RG+GD Sbjct: 426 REFEDRFVTLGLNYRVIGGPRFYERAEIRDALAYLRCVISPADDLAFERIVNVPKRGVGD 485 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + +R +R + L +A R L + + L + S L+ F++ + ++ +M Sbjct: 486 AAIKQIRDVARAAGVPLMEATRLLTESEELKPKLRSTLRGFVQSFERWREQAENMKHTEL 545 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG M+++++ + R+ENL+ELV + F L FL H +L Sbjct: 546 AEVVLDESGYTEMWQKDRSAEAAGRLENLKELVRSMEGFEN---------LSGFLEHISL 596 Query: 541 --EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEER 596 + G D DAVQ+MTLHSAKGLEF VF+ G EEG+FP Q +LDE G+ LEEER Sbjct: 597 VMDVDSGAGD---DAVQIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEQGKAGLEEER 653 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 RLAYVG+TRA + +A RR++G PSRF+ ELP+ V+ Sbjct: 654 RLAYVGITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVD 699 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust. Identities = 310/763 (40%), Positives = 434/763 (56%), Gaps = 66/763 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN +Q+E V LLVLAGAG+GKT L R+A+L+ P I+AVTFTNKA Sbjct: 20 LARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQILAVTFTNKA 79 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+G L+G+ M W+GTFH +A ++LR H L DF ILD++DQ+RLLK+ Sbjct: 80 AREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDFIILDTDDQIRLLKQ 139 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDR 183 LI+ +DEKQWP +Q I+ K+ GL P I + + + +Y AYQ+ Sbjct: 140 LIQGQGIDEKQWPAKQLAGIIDRWKNRGLTPDKIAGKEEDSFADGQGAALYLAYQKRLLS 199 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +LLL + +L Y +RF I+VDE+QDTN QY W+RLLA + Sbjct: 200 LNACDFGDLLLHMLVILTQHREVLDSYHDRFRYIMVDEYQDTNQAQYLWLRLLAQKNRNI 259 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIY WRGA+V NI RF DFPGA+ IRLE NYRST IL AA+ LI +NN R Sbjct: 260 CCVGDDDQSIYSWRGAEVANILRFEEDFPGAKIIRLEHNYRSTPQILGAASGLITHNNAR 319 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 LGK LWT+ GE + + ++ +EAR +V ++ + L + AIL R+ QSR Sbjct: 320 LGKTLWTERDQGEKVKIIGVWDGAEEARQLVADVQNLRRANIPLNKMAILIRAQFQSREF 379 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+ + ++PYRI GG RF+ER EI+DAL+YLR+IA DD AFER+VN P RGIG + + Sbjct: 380 EDIFIAKNLPYRIIGGFRFYERAEIRDALAYLRVIAQPTDDLAFERIVNVPKRGIGKKAM 439 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + Q + ++ L +A +L+ EK L + +L + M + + + T + Sbjct: 440 EKLYQAAFLDRIPLAEAAEKLVSEKTLGSKITQSLGQLMNDFSEWRKSLSVVSHADVTRK 499 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ +SG + M + R+ENL EL A EE +D L +FL H +L Sbjct: 500 MLDESGYKAMLRAVNDVQSAGRLENLTELARAM------EEYDD---LGSFLEHVSL-VM 549 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYV 601 + + D D + LMT+H+AKGLEF VF+ G EEG+FPSQ SLDEGG LEEERRLAYV Sbjct: 550 DHENDPIDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLNSLEEERRLAYV 609 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---VRLRATVSRPV---- 654 G+TRA + T+ +A RR+YG+ + PSRFI ELP++ +EE +R +A + R + Sbjct: 610 GITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDDHIEEKSLLRKKAPIWRDIWAED 669 Query: 655 --------------------------SHQR-----------MGTPMVENDSG-YKLGQRV 676 QR + P+ + DS YK+G V Sbjct: 670 RSKNPAYNSAKEAITPPWQLASRRGAGWQRAQKAAASPSPAVSHPLKKKDSPQYKIGDTV 729 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQ--GIKWLVAAYARL 717 +HAKFG+G + ++G ++ V F + GIK L++ + L Sbjct: 730 KHAKFGQGVVNEVDG----DKVTVEFHDKDVGIKKLLSQFVSL 768 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 520 bits (1340), Expect = e-146, Method: Compositional matrix adjust. Identities = 285/759 (37%), Positives = 434/759 (57%), Gaps = 51/759 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ LL N +Q EA +L+LAGAGSGKTRVL HRIA+++ + PY+I+A+ Sbjct: 1 MDLKSLL---NKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIE-NDIKPYNILAI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G MW+ TFH R+LR +DF I DS DQ Sbjct: 57 TFTNKAAGEMRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQK 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-----VYQ 175 L+K ++K +N++EK+ + + I KD QS+ E ++K Y Sbjct: 117 TLIKLVMKELNINEKEITDLEILGTIGKAKD---NIQSAQSFKKENEDNFRKNKIADAYL 173 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ +DF +L+++ EL+ +L+ Y+ +F I++DE+QDTN QY + +L Sbjct: 174 LYQKKLKENNALDFDDLIVKTVELFRKHNDVLEFYQNKFKYIMIDEYQDTNKAQYEFAKL 233 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA + +VGDDDQ IY WRGA + NI F D+P A+ ++LEQNYRS NIL AAN Sbjct: 234 LAAKHKNICVVGDDDQCIYAWRGADIRNILDFEKDYPEAKVVKLEQNYRSKGNILEAANK 293 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILY 354 +I+NN R K L T+ +GE IS++ A+++ EA FVV+ I K DNG + A+LY Sbjct: 294 VIKNNAERKFKILRTEQVEGEKISIHRAYSDKMEAAFVVSEIEKLKNDNGYKYKDFAVLY 353 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR EEAL +A +PYRI+GG++F++R+EIKD L+YL++I N D + R++N P Sbjct: 354 RTNAQSRNFEEALRRAGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVP 413 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 R IGD T++ ++ + + TL+ ++ L R+ + +++F ++++ + + Sbjct: 414 KRSIGDTTVEKLQNHATEIDDTLYNVLLDVDYVPGLTARSINPIKKFTDMMEEIMVMSEQ 473 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF-SYNEEDEDLMPLQA 533 + + + V++ +G + K + Q+RIENLEELV+ +F NEED+ L A Sbjct: 474 LSVSQLIEYVLEKTGYLKSLKDSKLIEDQSRIENLEELVSDAVEFEKSNEEDK---SLSA 530 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 +L AL + + V LMT+HS+KGLEFP VF+VGME G+FP+ + ++E Sbjct: 531 YLEKVALVQDMDDLEAEDNYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDNQME 590 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR-------- 645 E RRL YVG+TRA +KL +T AETR ++GK V + S FI E+P + V Sbjct: 591 EARRLCYVGITRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVNINGKSSSN 650 Query: 646 --------------------LRATVSRPVSHQRMGTPMVENDSG------YKLGQRVRHA 679 +R +S +++ + + SG +G++V+H Sbjct: 651 SFKNSSQTYGETRKTYNPHSIRGGMSASKANESLNKTLSGKSSGNAGIDELTMGRKVKHP 710 Query: 680 KFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 KFG GT++ G+ +L +AF QG+K L+ ++A LE Sbjct: 711 KFGVGTLITKSKVGDDYKLTIAFDSQGVKHLMFSFAPLE 749 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 520 bits (1339), Expect = e-146, Method: Compositional matrix adjust. Identities = 294/764 (38%), Positives = 430/764 (56%), Gaps = 54/764 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QREAV LL+LAGAGSGKTRVL +R A+L+ +PY+IMA+TFTNKA Sbjct: 3 LDMLNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR RI ++G +WV TFH R+LR + +F I D++DQ L+K + Sbjct: 63 AGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMKDI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACDRA 184 K + +D K + + + I+S KDE + P ++ G+ V++ VY+ YQ A + Sbjct: 123 CKRLEIDTKMYKEKMFLNVISSAKDEMIDPIEFENRFTGDFVKRKQALVYKEYQNALKQN 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL++ EL+ +L +Y+ERF I+VDE+QDTN +Q+ IRLLA + Sbjct: 183 NALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYKNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA + NI F F A+ I+LEQNYRST NIL AAN++I NN GR Sbjct: 243 VVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRK 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVL 363 K+LWTD G+ I+ + +EA +V I G A +CA+LYR+NAQSR+ Sbjct: 303 DKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSRLF 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE + A++PY+I GG+ F+ R+EIKD L+YL+ I N +DD A +R++N P RGIG ++ Sbjct: 363 EEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVPKRGIGATSI 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + V + ++ + + A R + + +A R+A ++ F+ I +L + Sbjct: 423 NKVTDYAIEKGIDFYTALRYVDEVPGMA-RSAGKIKPFVMFIQSLRARAEMDSVSQLIQA 481 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I ++G + E ++ + RIEN++EL+ + EE+ L FL AL A Sbjct: 482 IIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEENP---TLSGFLEEVALVAD 538 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL---DEGGRLEEERRLAY 600 D D V LMTLHSAKGLEFP V++ GME+G+FPS MS+ D +EEERRLAY Sbjct: 539 IDGLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDDATSEIEEERRLAY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-EV--------------- 644 VG+TRA + LT+T A R + G+ +++ SRF+ E+P E + EV Sbjct: 599 VGITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRDDDIERNSQ 658 Query: 645 ---------------------------RLRATVSRPVSHQR-MGTPMVENDSGYKLGQRV 676 R R V PVS+Q+ + YK+G RV Sbjct: 659 STYRKAKEAFKKTPTYGTEYATTFNTQRTRTPVYTPVSNQKSFASANTTGGLSYKVGDRV 718 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 H KFG G ++ + G + V F G K + A++A+L+ + Sbjct: 719 SHIKFGAGEVMAIVEGGRDYEVTVDFDKAGTKKMFASFAKLKKI 762 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 302/756 (39%), Positives = 427/756 (56%), Gaps = 50/756 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN+ QREAV LL++AGAGSGKTRVL HRIA+L+ + P SI+A+TFTNK Sbjct: 60 LLDGLNEPQREAVLHAGGPLLIIAGAGSGKTRVLAHRIAYLVGERHAHPGSILAITFTNK 119 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+ +L+G MWV TFH R+LRA A LP +F I D+ D RL+ Sbjct: 120 AAAEMRQRVEELVGPRARLMWVSTFHSACVRILRAQAKTAGLPSNFSIYDTADSQRLMTM 179 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRA 184 +++ + +D K+ PR + I+ K+E + S E+ +VY+ Y + A Sbjct: 180 VLRDLEIDPKKTTPRSMLGQISKLKNELVDHDTFSSRAQTEAERQLAQVYRLYADRLTAA 239 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK-- 242 +DF ++++ L P I +HYR RF NILVDE+QDTN QY ++ L G K Sbjct: 240 KALDFDDIIMTTVHLLQAFPMIAEHYRRRFRNILVDEYQDTNTAQYQLVKELVGQHEKRT 299 Query: 243 -------------------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNY 283 + +VGD DQSIY +RGA + NI F D+P A+ I+LEQNY Sbjct: 300 VDGDLVRPGLNTEDLPPAELCVVGDADQSIYAFRGATIRNIIEFERDYPDAKVIKLEQNY 359 Query: 284 RSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD- 342 RST IL+AANA+IENN GR K LWTD DG+ I+ Y A +E EA+FV I D Sbjct: 360 RSTQTILTAANAVIENNKGRRAKNLWTDSGDGKLITGYVADDEHSEAQFVAEEIDRLSDA 419 Query: 343 NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN 402 A+ YR+NAQSRV EE ++ +PYR+ GG+RF+ER+E++DAL+YLR +AN + Sbjct: 420 KETTYGGVAVFYRTNAQSRVFEEVFVRVGLPYRVVGGVRFYERKEVRDALAYLRALANED 479 Query: 403 DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM 462 D + RV+NTP RGIG++ + + + S ++T A R + LA R+ A+Q F Sbjct: 480 DIVSVRRVLNTPKRGIGEKAEESLERLSARERITFGDALRRADEAPGLAARSVKAVQGFT 539 Query: 463 ELIDALAQETADM-PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 +++D L + A+ P HV + +++ +GL + + +TRIENL EL+ +F Sbjct: 540 QMMDELREMAAEYGPAHV-LEAILERTGLLQELQDSDDPQDETRIENLRELLAVALEF-- 596 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQD---AVQLMTLHSAKGLEFPQVFIVGMEEG 578 E+ + L FL AL A Q +D V LMTLHSAKGLEFP VF+ GME+G Sbjct: 597 -EQGQPEGRLPEFLERVALVADSDQIPDGEDHEGMVTLMTLHSAKGLEFPVVFLTGMEDG 655 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +FP S+ + +EEERRLAYVG+TRA ++L ++ + R +G Y+ PS+F+GE+PE Sbjct: 656 VFPHMRSMGDKKEMEEERRLAYVGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPE 715 Query: 639 ECVEEVRL--------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEG 684 VE R R SR ++ ++ D G RV H FG G Sbjct: 716 PLVEWERTAPEPKTGERSPFGDRRGTSRGFQQRKGAVKVISLDP----GDRVIHDSFGMG 771 Query: 685 TIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 T+V + G E + F G++ L+ A ++ + Sbjct: 772 TVVAVSGR-ERDEATIDFGSSGVRTLLLTMAPVQKL 806 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust. Identities = 301/772 (38%), Positives = 428/772 (55%), Gaps = 63/772 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 +DSLN+ QREAV LLVLAGAGSGKTRVL +RIA ++ N P+ IMA+TFTNKA Sbjct: 4 IDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+G+L+G S GMWV TFH + R+LR + F I D +D RLLK + Sbjct: 64 ANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLLKDV 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDRAG 185 + ++LD K+WP I+ K+E P + +PV + +VY YQE A Sbjct: 124 MAGLDLDPKRWPVNSIRGKISQAKNELKAPGVYADEARDPVSKVTARVYAVYQERLKMAN 183 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL+ + L+ N P +L+ Y++RF +LVDE+QDTN+ QYA +LLA +M+ Sbjct: 184 AFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKHQNIMV 243 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA + NI F D+P A +I+LEQNYRS+ NIL+AANA++ +N R Sbjct: 244 VGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTKRKQ 303 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+L+T+ DGE I +Y A +E DE R++ I + G + E A+ YR+NAQSR LE+ Sbjct: 304 KRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRSLED 363 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 LL+A +PYRI GG +FF+R EI+D ++YL L N DD A +RV+N P RGIG T++ Sbjct: 364 MLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKRVINQPRRGIGKTTIEH 423 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + +R+ LT QA L ++ L R +A+ F+ LI+ ++ ++ VI Sbjct: 424 IENVARNSNLTFMQAAEWCLADETLQMRTRNAIGGFVGLINDAQSYGGELRKVIEA--VI 481 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMP-------------- 530 S L EQE+ ++ ++RIEN++E ++ ++ + E DE +P Sbjct: 482 DRSQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLS 541 Query: 531 ---LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L+ FL L A V LMT+HS+KGLEF VF+ GMEE +FP S Sbjct: 542 PDSLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR 601 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL- 646 + LEEERRLAYV +TRA ++L LT A R+++G+ + SRF+GE+P E + L Sbjct: 602 DPQGLEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGLG 661 Query: 647 ----------------------------------RATVSRPVSHQRMGTPMVENDSG--- 669 A +RP S+ +P E S Sbjct: 662 SSGFAGTGWEKRGSRRGISGSGKEAGGGRVFGQSSAGGTRPRSYTGRTSPNAEKKSAARV 721 Query: 670 -YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +G V H FG G + ++G H + +G K L+ YA + + Sbjct: 722 TFAVGDIVDHKTFGRGRVTKVDGDTLHIKFS---KGNVTKKLLKDYAPIVKI 770 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 292/736 (39%), Positives = 418/736 (56%), Gaps = 30/736 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+Q++AV LL+LAGAGSGKTRVL RIA L+ P+ I+A+TFTNKAAA Sbjct: 2 NLNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAA 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ +G MW+ TFH + R+LR + F I DS +Q +K ++ Sbjct: 62 EMRERMTNDVGEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVM 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRAG 185 K MN++EK++ +I+S+K++ + P +S GN E K+Y AYQ+ Sbjct: 122 KEMNINEKEFQVGAVFSHISSKKNQFILPRQALKESEGNFREHIIAKIYDAYQDKLYENN 181 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 ++DF +LL+ L+ N P +L Y+ +F ILVDE+QDTN +QY IR LA + + Sbjct: 182 VMDFDDLLVNVCILFNNHPDVLSFYQNKFKYILVDEYQDTNCVQYELIRQLADKHKNLCV 241 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA + NI F DF I+LEQNYRST NIL AANA+++NN R Sbjct: 242 VGDDDQSIYGWRGADISNILEFEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKP 301 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLE 364 K L+TD GE I LY NE EA + +I K + + AILYR+NAQSRVLE Sbjct: 302 KVLFTDNETGEQIELYVVKNEYREADVIAAQISKDLSEYRRDYKDFAILYRTNAQSRVLE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E ++Q+S+PYR+ GG+RF+ER+EIKD +SYL++I N DD A R++N P RGIG ++D Sbjct: 362 EKMIQSSIPYRMLGGVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINIPKRGIGAASID 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 ++Q + D Q+ ++ + + Q L A + F LI+ L + + + + Sbjct: 422 KIQQAANDYQVNFYEVAKNIRQFGILGKTATEKVSVFANLIEELKELAQEENILALLQAI 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I + ++ + E RI N+ E V+ + + E+ + L FL L A Sbjct: 482 IVKTDYNNFLKETEPEDAADRILNVREFVSKAAAYVQSNEEAN---LNNFLEEITLVADV 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLAYVG 602 D +AV LMTLHS+KGLEFP VF+ G+EEG+FPS MS ++ +LEEERRL YVG Sbjct: 539 DNYDQNSNAVVLMTLHSSKGLEFPVVFMPGLEEGLFPSHMSASDEDKTKLEEERRLCYVG 598 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS-------RPVS 655 +TRA +KL + AE R YG+ PSRFI ELP E + ++ A+ P Sbjct: 599 ITRAREKLYILQAEERMTYGQIKAVEPSRFIAELPAEVIRINKVFASKKYAKKNNYEPTK 658 Query: 656 -----------HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 H++M + ++E+ + G V H FG+GT++ E + + F+ Sbjct: 659 KSDIEFKIWNPHKKMESTIIED---FVTGDIVMHRMFGKGTVIEKMKKKEDIFVTIKFES 715 Query: 705 QGIKWLVAAYARLESV 720 K L +A+L+ V Sbjct: 716 GEFKKLNTKFAKLQKV 731 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 306/785 (38%), Positives = 448/785 (57%), Gaps = 69/785 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +++ + LN QR+AV A LL++AGAGSGKTRVL HRIA+L+ + +P+SI+A+ Sbjct: 5 INIDQAVQKLNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAI 64 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ L+G + +WV TFH + R+LR +F ILDS DQL Sbjct: 65 TFTNKAAREMQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFSILDSADQL 124 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQE 179 +++ +K +N+D K++ P+ I+ K+E + P + Q G+ KV++ YQ+ Sbjct: 125 SVIRNCMKELNIDVKKFEPKAVQAEISGAKNELITPERYEQKTGDYFTDIVAKVFKMYQK 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +DF +L++ +L+ P +L+ Y+ +F I VDE+QDTN QY R+LA Sbjct: 185 RLKSNNSLDFDDLIMTTIQLFKEMPEVLEFYQNKFRYIHVDEYQDTNRAQYMLCRMLADK 244 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQSIY WRGA + NI F +D+P A TI LEQNYRS++NIL AANA+I+ Sbjct: 245 HHNICVVGDSDQSIYRWRGADITNILNFEDDYPEARTIMLEQNYRSSANILEAANAVIKL 304 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N GR KKLWTD +G+ I+LY A +E DE FV I +G + AILYR+NAQ Sbjct: 305 NTGRKPKKLWTDQGEGDMITLYQADSEHDEGYFVTGTISKNVKSGRRYDDHAILYRTNAQ 364 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRV+EE L+++ +PY+I GG++F++R+EIKD L+YLRLI+N +DD + +R++N P RGIG Sbjct: 365 SRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQRIINVPKRGIG 424 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 D T+ + + + RQ T + LQ L RA L F ++ID L Q + + Sbjct: 425 DTTVAKLAEEAV-RQGTSIFSVLGNLQGIDLNARAQGLLHEFRDMIDNLTQMVDYLSVTE 483 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 T++V++ S R ++EK + R+EN++E ++ T F ED+ L+ AFL+ A Sbjct: 484 LTEKVLEMSQYRIELQREKTLESTARLENIDEFLSVTMDFEKRNEDKTLV---AFLTDLA 540 Query: 540 LEAGEGQADTW-------QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 L A D ++V LMT+HSAKGLEFP VFI+GMEE +FP +L++ L Sbjct: 541 LIADIDSMDKDDDGKPADNNSVVLMTMHSAKGLEFPVVFIIGMEESIFPHSRALNDNEEL 600 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 EEERRLAYVG+TRA ++L LT A +R L+G+ + PSRF+ E+P+ T+ R Sbjct: 601 EEERRLAYVGITRAEKQLYLTCARSRTLFGRISANLPSRFLQEVPDNVKTLASPGGTIGR 660 Query: 653 PVSHQ-----------------------------------------RMGTPM-------- 663 S R+ TP+ Sbjct: 661 SGSFAGGASRASYGSSSGSSFGGGRAPSFGASGAGARTAGPSGAGVRVSTPLDAAAKAAT 720 Query: 664 -------VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAYA 715 D + G +V H K+GEG IV+++G+G LQ+AF G+K L+A +A Sbjct: 721 NAGAAAGNAADRNFVAGDKVAHGKWGEGVIVSVKGTGNDMELQIAFPAPVGVKRLLAGFA 780 Query: 716 RLESV 720 + V Sbjct: 781 PITKV 785 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 279/641 (43%), Positives = 387/641 (60%), Gaps = 8/641 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN +Q+EAV LL+LAGAGSGKTRVL HRIA+L+ P +I+A+TFTNK Sbjct: 3 LLNGLNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI L+G MWVGTFH + R+LR + F I D++DQ ++K Sbjct: 63 AAREMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVVIKE 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQ-TWQKVYQAYQEACDR 183 IK ++++EK +PP+ + I QKDE + H + Y + K+Y+ Y++ Sbjct: 123 CIKELSINEKNFPPKSVLETIGKQKDELIDAVHYEKLYASDFRMGKIAKIYKLYEKKLKA 182 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF ++++ +L+ P +L +Y+ RF ILVDE+QDTN QY +R L+ + Sbjct: 183 NNALDFDDIIMNTIKLFDKYPEVLDYYQRRFRYILVDEYQDTNTAQYTLVRKLSEAQENL 242 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIYGWRGA + NI F DF TI+LEQNYRST NIL AAN +I NN GR Sbjct: 243 CVVGDDDQSIYGWRGANIRNILDFEKDFKKCCTIKLEQNYRSTQNILDAANHVIGNNTGR 302 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRV 362 K LWTD G I + NE +EA + I + D + A+LYR NAQSRV Sbjct: 303 KCKSLWTDNKGGSKIVICENDNEHEEALYAAREIQRLIFDEDRKYKDFAVLYRINAQSRV 362 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE ++ +PY+I GG +F++R+EIKD ++Y+RL+ N D+ + +RV+N P RGIGD T Sbjct: 363 LEEMFMREGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGDNVSLKRVINVPKRGIGDTT 422 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ + ++L+ + +L RAA L F +I+ M + D Sbjct: 423 VENAEILAYQGDVSLFTVISNAEEFPSLK-RAAQKLGNFSLMINKFRTMKEHMTISQMLD 481 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 V++DSG+ YE E + Q+RIEN++EL + +F ED L+ FL+H +L + Sbjct: 482 MVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSEDNS---LEEFLAHISLVS 538 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLAYV 601 QD V LMT+HSAKGLEFP VFI GMEEG+FP ++ EG +LEEERRL YV Sbjct: 539 DIDSLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAITEGPEQLEEERRLCYV 598 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G+TRA +KL L+ A R L+G Y+RPSRF+ E+PEE VE Sbjct: 599 GITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEIPEELVE 639 Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + +G +V H KFG+GTI + L++ F+G G+K L+A+ A L Sbjct: 734 AFSVGDKVEHKKFGKGTISKVTADSNDQILEIQFEGAGMKRLMASMANL 782 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 302/768 (39%), Positives = 427/768 (55%), Gaps = 53/768 (6%) Query: 2 DVSY-LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 D S+ LLD LN +QR AV LL++AGAGSGKTRVL HRIA+L++ + P I+A+ Sbjct: 5 DTSHPLLDGLNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAI 64 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G G MWV TFH R+LR P +F I D+ D Sbjct: 65 TFTNKAAGEMRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQ 124 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQE 179 RL+ + + ++LD +++PP+ +++ K+E + ++ + +EQ + Y+ YQ Sbjct: 125 RLMALVCRELDLDPRRYPPKSFSAQVSNLKNELIDYEAFKARASTHLEQKLAEAYEMYQA 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +AG +DF +L++ L P +HYR RF +ILVDE+QDTN+ QY +RLL Sbjct: 185 RLQQAGAMDFDDLIMTTVHLLQAFPEAAEHYRRRFRHILVDEYQDTNHAQYELVRLLTES 244 Query: 240 TGK------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 G+ + +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST ILSAA Sbjct: 245 PGEDVGPAELCVVGDADQSIYAFRGATIRNILEFERDFPDATTILLEQNYRSTQTILSAA 304 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAI 352 NA+IE N R K+LW+D +GE I Y A NE DEA FV + D G A + A+ Sbjct: 305 NAVIERNAHRKPKRLWSDQGEGEKIVGYVADNEHDEAAFVAAEVDRLTDAGLARPGDVAV 364 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 YR+NAQSRV EE ++ +PY++ GG+RF+ER+E++D L+YLR++AN D + R++N Sbjct: 365 FYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILN 424 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P RGIGDR V + ++T W+A R Q +A R+A A++ F+ L+D L + Sbjct: 425 VPRRGIGDRAEACVEAHAARERITFWEALRTPEQVPGMAPRSAKAVREFVALMDDLRERA 484 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF------------- 519 A + V+ ++G + + + +TRIENL EL R+F Sbjct: 485 ATATPAELIEAVLTETGYLAELQNSRDPQDETRIENLRELEAVAREFEDRLAERVPAAEE 544 Query: 520 --------------SYNEE-----DEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLH 560 + E+ D D +P A + GE + Q V LMTLH Sbjct: 545 EEEEAPSGAAGRLVDFLEQISLVADADAIP---GTKGAPIPPGERAPEDEQGVVTLMTLH 601 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 +AKGLEFP VF+ GME+G+FP ++ LEEERRLAYVG+TRA Q+L LT A R Sbjct: 602 TAKGLEFPVVFLTGMEDGVFPHLRAMSNPQELEEERRLAYVGITRARQRLYLTRAVMRSA 661 Query: 621 YGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVEND-------SGYKLG 673 +G + SRF+ E+P V+ R A + P S M G Sbjct: 662 WGAPQVNPASRFLSEVPSSLVKWER-EAAMPAPGSLTAMAAARPAARSASARAVPALSPG 720 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYARLESV 720 +V H FG GT+++++G+G+ + + F G G+K LV YA LE + Sbjct: 721 DKVTHDSFGLGTVISVDGTGDKTAASIDFGGTHGVKRLVLRYAPLEKL 768 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 307/778 (39%), Positives = 426/778 (54%), Gaps = 71/778 (9%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LL LN +Q AV S LL++AGAGSGKTRVL HRIA+L++ P I+A+T Sbjct: 26 DAKELLHGLNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAIT 85 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI L+G + MW+ TFH R+LR L F I DS D LR Sbjct: 86 FTNKAAAEMRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLR 145 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+ + + ++LD K++ P+ I++ K+E + + +P EQ +VY+ Y + Sbjct: 146 LITLIARGLDLDPKRFAPKAMQHKISALKNELIDDDAFAATATDPFEQGVAEVYRGYTQR 205 Query: 181 CDRAGLVDFAELLLRAHELWLNK--PHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A +DF +L+ A +WL + P + +YR RF +++VDE+QDTN+ QYA ++ + G Sbjct: 206 LRQANALDFDDLI--AQTVWLFRAFPGVADYYRRRFRHVMVDEYQDTNHAQYALVKEIVG 263 Query: 239 -------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 + ++ +VGD DQSIY +RGA + NI F D+P A TI+LEQNYRST ILS Sbjct: 264 PAEGSGDEPAELTVVGDSDQSIYAFRGADIRNIVEFEKDYPNARTIKLEQNYRSTQTILS 323 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAEC 350 AANA+IE N R K+LWT DGE I Y A NE +EARF+ I QD + Sbjct: 324 AANAVIEKNPDRPVKRLWTAEGDGEKIIGYVAENEHEEARFIAEEIDRLQDEADFRPGDV 383 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AI YR+NAQSR +EE L++ +PYR+ GG RF+ER+EIKDAL+YLR++ N DD R+ Sbjct: 384 AIFYRTNAQSRSIEEILMRVGLPYRVVGGTRFYERKEIKDALAYLRVLVNPEDDVNLRRI 443 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 +N P RGIGDR V + + + A R A+A R+ +A+ F++LID L + Sbjct: 444 LNEPKRGIGDRAEGAVAALAERERSSFMAALRHAEDAPAIATRSLNAVNGFVKLIDDLTE 503 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + + V++ +G + ++R+ENL ELV R++ E D+ Sbjct: 504 VASTSGAATALEAVLEQTGYLETLRASSDPQDESRVENLAELVAVVREY---ERDKPEGS 560 Query: 531 LQAFLSHAALEAGEGQADTWQDA-----------------VQLMTLHSAKGLEFPQVFIV 573 L FL AL A AD DA V LMTLH+AKGLEFP VF+ Sbjct: 561 LTDFLEGVALVA---DADQIPDAPGSDTEAAVAEARRLGVVTLMTLHTAKGLEFPAVFLT 617 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 GME G+FP S + L EERRLAYVG+TRA ++L LT AE R L+G+ Y+ S FI Sbjct: 618 GMEHGIFPQARSATDAKELAEERRLAYVGLTRARKRLYLTRAEVRSLWGQSQYNPASPFI 677 Query: 634 GELPEECVEEVRLRATVSRPV-------------SHQRMGTPMVENDSG----------- 669 E+P +E R + + P SH G+ + D+G Sbjct: 678 DEVPANLIEWKREGMSRAIPSIGSSGFGRDRYSGSHWGAGSAVGGRDAGQLPPSLATRSA 737 Query: 670 ----------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 +G +V H FG GT+V +EGSG+ + +V F + K L+ YA L Sbjct: 738 RVQPQKEIPQLSVGDKVEHTSFGAGTVVALEGSGDKTVAKVRFAAEE-KRLLLRYAPL 794 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 513 bits (1322), Expect = e-144, Method: Compositional matrix adjust. Identities = 303/770 (39%), Positives = 433/770 (56%), Gaps = 55/770 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN QREAV S LL++AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 27 LDPQALLDGLNGPQREAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAARQVHPGEIIAI 86 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ QL+G MWV TFH R+LRA H A L F I D++D Sbjct: 87 TFTNKAAGEMKERVAQLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSR 146 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQE 179 RL++ + + ++LD K++P R +++ K+E + P + P E+ + Y YQ Sbjct: 147 RLMQLVARELDLDPKRYPARGLAAQVSNLKNELVDPEEFAARAKGPNERALAEAYTLYQR 206 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR-LLAG 238 A +DF +L++ L + PH+ + YR RF ++LVDE+QDTN+ QY I+ L++G Sbjct: 207 RLREAHALDFDDLIMTTVHLLQSHPHVAETYRRRFRHVLVDEYQDTNHAQYVLIKELVSG 266 Query: 239 ----DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 D ++ +VGD DQSIY +RGA + NI F DF A TI LEQNYRST IL+AAN Sbjct: 267 TDGLDPAELCVVGDADQSIYAFRGATIRNILEFERDFTDARTILLEQNYRSTQTILNAAN 326 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAIL 353 A+I+ N R K+LW++ G+PI Y A E EA +V I D+G + A+ Sbjct: 327 AVIDRNTSRKPKRLWSEAGTGDPIVGYVADTEHTEADWVAREIDRLVDDGDTRPGDVAVF 386 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRV EE ++ +PY++ GG+RF+ER+E++DAL+YLR + N +D + RV+NT Sbjct: 387 YRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRVLNT 446 Query: 414 PTRGIGDRTLDVVRQ-TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P RGIGDR V SRDR ++ A R ++ RAA+ + F+ L+D + + Sbjct: 447 PRRGIGDRAEACVEALASRDR-ISFGAALRRARDAPGISTRAANGIAEFVALLDGVREVA 505 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS-----YNEEDED 527 + ++ SG T E+ + R++NL+ELV+ R+++ EE E Sbjct: 506 ETSAPEEVLEALLNRSGYLTELEESLDPQDAGRVDNLQELVSVAREYTERVEGLGEEGER 565 Query: 528 LMPLQAFLSHAALEAGEGQ--ADT--WQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ 583 + FL AL A Q AD Q V LMTLH+AKGLEFP VF+ GME+G+FP Sbjct: 566 AT-VAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHA 624 Query: 584 MSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 + + LEEERRLAYVG+TRA Q+L L+ A TR +G+ Y+ PSRF+ ELP E V Sbjct: 625 RTFGDNHELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPAYNAPSRFLEELPAELVRW 684 Query: 644 VRLRATVSR-----------------------PVSHQ---RMG---------TPMVENDS 668 R + + P + Q R+G + + Sbjct: 685 ERTEGSYTSWAGGGGGVGGRADRGQGGFTGGTPKAAQLARRLGVDGSRLATASELPSAPP 744 Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 +G RV H ++G G ++ +EG G +R Q+ F Q + WLV +A ++ Sbjct: 745 RVAVGDRVNHQRYGLGRVLTVEGHGPGARAQIDFGDQTL-WLVLRHAPID 793 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 513 bits (1320), Expect = e-143, Method: Compositional matrix adjust. Identities = 284/755 (37%), Positives = 432/755 (57%), Gaps = 50/755 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LN QREAV +L+LAGAGSGKT+VL RIA+L+ + +I+A+TFTNKA Sbjct: 11 LDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITFTNKA 70 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+ Q +G MW+ TFH R+LR + F I DS DQ+ L+K Sbjct: 71 ANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTLVKDC 130 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKV---YQAYQEACDR 183 +K +NL +K + P+ + I+ KD+ P + N + K+ Y YQ+ R Sbjct: 131 LKELNLSDKVFEPKAVISAISGAKDKLYTPKQFKDI-NMADNRMVKIADIYALYQDRLKR 189 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +L+L+ EL+ +L +YR RF I+VDE+QDT+ QY I+LLA + + Sbjct: 190 NSALDFDDLILKTVELFKANDEVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQNI 249 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIYGWRGA + NI F D+ ++LEQNYRST IL AAN +I NN R Sbjct: 250 CVVGDDDQSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIER 309 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRV 362 KKLW++ +GE I + +E++EA F+ + I + + + A+LYR+NAQ+R Sbjct: 310 KRKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQARP 369 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E+AL ++ +PY IYGG +F+ER+EIKD L+YLR+I N DD + +R++N P RGIG RT Sbjct: 370 VEDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVPRRGIGLRT 429 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ + + +Q +++ ++ ++ +A +++ F+++I L P+ + Sbjct: 430 IEKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIE 489 Query: 483 RVIKDSG-------LRTMYEQE---KGEKGQTRIENLEELVTATRQF-SYNEEDEDLMPL 531 +V+ +G +R E++ KGE+ Q RI+NL E ++ +F S N++ + L Sbjct: 490 KVLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDL 549 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD--EG 589 + FL+ AL E + D V LMT+H++KGLEFP VF+ GMEEG+FP ++ Sbjct: 550 ETFLTSIAL-TSESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSD 608 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV----- 644 ++EEERRL YVG+TRA ++L ++ E R LYGK SRF+ ELPEEC+E + Sbjct: 609 SQIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKK 668 Query: 645 -----------------RLRATVSRPVSHQRMGTPMVE-----NDSGYKLGQRVRHAKFG 682 + +T+S+ ++ + + N KLG +V H KFG Sbjct: 669 ELSYSKASYNMLDKYTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGSKVHHPKFG 728 Query: 683 EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 GT+V++ G+ + +AF QGIK + Y L Sbjct: 729 VGTVVSIIGTD----VTIAFDQQGIKKINKEYTTL 759 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 294/735 (40%), Positives = 421/735 (57%), Gaps = 29/735 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ + DKQREA+ LL++AGAGSGKTRV+ RI +LMS E SPY+I+A+TFTNK Sbjct: 3 FLEDVTDKQREAITHIDGPLLIVAGAGSGKTRVITRRIGYLMS-EGISPYNILAITFTNK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ + +S GMWV TFH + R+LR +DF I D+ DQL +K Sbjct: 62 AANEMAERVKKF--SSHKGMWVSTFHKMCSRILRKDIELLGYSKDFTIYDTVDQLNRIKS 119 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRA 184 ++ + +D W PR + I++ K++ + + + + Q K+Y+ Y Sbjct: 120 IMADLEIDTAHWKPRSIISSISNAKNKLIDHERFAATASDIYHQMVAKIYKKYDTMLKSG 179 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL++ EL +P +L Y+ERF IL+DE+QDTN +QYA RLLA + Sbjct: 180 NALDFDDLLIKTVELLKIRPDVLSSYQERFKYILIDEYQDTNFVQYAISRLLAQKYKNIC 239 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 + GD DQSIYGWRGA + NI F D+P A + LEQNYRST NIL AA+++I+ N R Sbjct: 240 VTGDPDQSIYGWRGADLRNIMDFEKDYPDARVVLLEQNYRSTKNILLAASSVIQKNKYRK 299 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K++WT+ GE I NE EA + I+ + NG E A+ YR+NAQSR LE Sbjct: 300 QKEIWTENEHGEKIKTIHCENEHSEAEEIAKTIRALRGNGIKYTEIALFYRTNAQSRTLE 359 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 AL A +PY I GG+ F+ R+EIKD L+Y+RL N DD+A ER +NTP RGIG T+ Sbjct: 360 IALRNAGIPYVIVGGVEFYRRKEIKDILAYIRLCVNPCDDSALERAINTPARGIGTTTVK 419 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 +++ + R+ TL+ A + + G++A+A++RF ELI L + + + + Sbjct: 420 KIKEWAESRESTLFNAIGIVDAIHEVTGKSAAAIKRFYELIMVL-RHMPETSVEKTLKSI 478 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I +G + + ++ + RI N+EELV A ++ N D LQ FL AL + Sbjct: 479 IDKTGYIHFLRKSEEKESEDRIANVEELVNAAHEYDANHTDG---SLQGFLEEVALISDL 535 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + +AV LMTLH+AKGLEFP VFI GMEEG+ P S +EEERRL YVG+T Sbjct: 536 DTVEDLAEAVTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERRLCYVGIT 595 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RAM++L LTY + R YG+ + SRF+ E+ +C++ RL T + + + Sbjct: 596 RAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIHADCMD--RLDKTENHFSYEYQGKSNSW 653 Query: 665 ENDS-------------------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 END+ + G+ VRH FG G ++ M+GS E + ++V+F Sbjct: 654 ENDAVEACDVLSESDVFLSGNVRTFLNGEVVRHPVFGIGRVLEMQGSNEKASVKVSFNIG 713 Query: 706 GIKWLVAAYARLESV 720 G K L+ AYA+LE V Sbjct: 714 GTKNLMLAYAKLEKV 728 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 301/693 (43%), Positives = 414/693 (59%), Gaps = 72/693 (10%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I++VTFTNKA Sbjct: 35 LSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTFTNKA 94 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+GQ++G + GM W+GTFH + R+LR H L +F +LD++DQ+RLLK+ Sbjct: 95 AREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQIRLLKQ 154 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-----YGNPVEQTWQKVYQAYQEA 180 L+ A N+D+K+WP R I+ K+ GL P + + +GN K+Y YQE Sbjct: 155 LLAADNIDDKRWPARMLAGLIDGWKNRGLTPSQVPAGEAAMFGN---GRGGKLYAQYQER 211 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA--- 237 DF +LLL L+ P +L+ Y+ RF ILVDE+QDTN QY W+RLL+ Sbjct: 212 LKILNAADFGDLLLENIRLFREHPDVLRSYQNRFKFILVDEYQDTNVAQYMWLRLLSQTP 271 Query: 238 -----------------------------GD----TGKVM-----------IVGDDDQSI 253 GD +G V+ VGDDDQSI Sbjct: 272 SSSSLPGSTRQSISSQEDGSPGLAASRRPGDDVETSGNVVASTSAPPKNICCVGDDDQSI 331 Query: 254 YGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGA 313 YGWRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI +N GRLGK L T+ Sbjct: 332 YGWRGAEVDNILRFDHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDV 391 Query: 314 DGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMP 373 DGE +++ A++ +EAR + I+ Q G AL E AIL R++ Q R E+ + +P Sbjct: 392 DGEMVTVTGAWDSEEEARAIGEEIEQLQRQGHALNEIAILVRASFQMREFEDRFVTLGLP 451 Query: 374 YRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDR 433 YR+ GG RF+ER EI+DAL+YLR+I + DD AFER+VN P RG+GD T+ ++ +R R Sbjct: 452 YRVIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNVPKRGLGDATVQMLHDHARKR 511 Query: 434 QLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD-SGLRT 492 ++ L++A R ++ L +A S+L+ +E + Q D H + ++ D SG Sbjct: 512 RIPLFEAARMVIDTDELKPKARSSLRGLIENFERW-QVQRDALAHTELAEIVLDESGYTE 570 Query: 493 MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG-EGQADTWQ 551 M+++++ R+ENL+ELV + +F LQ FL H +L EG AD + Sbjct: 571 MWQKDRSADAAGRLENLKELVRSMEEFEN---------LQGFLEHISLVMDREGGAD--E 619 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQK 609 DAV +MTLHSAKGLEF VF+ G EEG+FP Q +LDE GR LEEERRLA+VG+TRA ++ Sbjct: 620 DAVSVMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEQGRAGLEEERRLAHVGITRARKR 679 Query: 610 LTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 L +A RR++G PSRF+ ELP VE Sbjct: 680 AKLYFATNRRIHGTWNTTIPSRFLDELPAANVE 712 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 296/764 (38%), Positives = 430/764 (56%), Gaps = 52/764 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD LNDKQREAV ++++AG GSGKTR L HRIA+L++ P I+A+TFTNK Sbjct: 25 ILDGLNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTFTNK 84 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+G GMWVGTFH RLLR +DF I D+ D RL+++ Sbjct: 85 AANEMQERVEALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLIRQ 144 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-TWQKVYQAYQEACDRA 184 +K NLD PR I+S K+E + P +Q +VY AY+ A +A Sbjct: 145 QMKGRNLDTDVVKPRSVQRMISSAKNEMIDPQEYAELARGDQQEIVAEVYPAYERALKQA 204 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LLL+ EL+ +L+ Y+ R+ + +DE+QDTN QY R L+ + Sbjct: 205 NALDFDDLLLKPIELFEQHEDVLEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHKNLC 264 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDD QSIY +RGA + NI F ND+P A TIRLE+NYRST NI+ A+++IE N+ ++ Sbjct: 265 VVGDDAQSIYAFRGADITNILNFDNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQI 324 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVL 363 K LWTD A+GE ++L A +E DEA+ + R++ +G + A+LYR+NAQSR + Sbjct: 325 EKSLWTDNAEGEYVALMEALSEKDEAQKIERRVRDLHLRDGMEYGDFAVLYRTNAQSRAI 384 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEAL + ++PYR+ GG F+ER+EIKD L+YL+L+ N ND A+ +RV+N PTRGIGD+T Sbjct: 385 EEALRKENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYPTRGIGDKTQ 444 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE--TADMPLHVQT 481 +++ ++ L+LWQA + + + L RA A+ +F LI A + T +P Sbjct: 445 ARLQRYAQQHSLSLWQAVERVEEIETLGTRAERAVGKFRRLIARYASKAGTGSVPADELA 504 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 +I+D+GL + +E + R EN++EL++A ++ + ED + FL AL Sbjct: 505 RDLIQDAGLLSELRKEHTRENLQRWENVQELISALAEYVESTED---ATISTFLQEVALM 561 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + +A+ D V LMTLH+AKG EFP VF+ G+EEG+FP + + E LEEERRL YV Sbjct: 562 TDQDEAEEGDDKVTLMTLHAAKGTEFPVVFVAGLEEGLFPLEQATQEKAELEEERRLFYV 621 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV----------EEVRLRATVS 651 GVTRA ++L L++A +R YG++ + SRF+ E+ + V + R A Sbjct: 622 GVTRAEERLYLSWARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAEEG 681 Query: 652 RPVSHQRM-------------------------------GTPMVENDSGYK---LGQRVR 677 + M G V D G+ G +V Sbjct: 682 PSADYDEMDPHYYRQDLSGDGGATGSSDGLRRIESTDGGGGRRVVYDEGHGEIVPGAQVE 741 Query: 678 HAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAYARLESV 720 H KFG G + ++EG G+ + V F G K L YA L + Sbjct: 742 HQKFGRGKVQSLEGEGDKATAVVFFGSDVGNKKLKLKYANLRVI 785 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 509 bits (1311), Expect = e-142, Method: Compositional matrix adjust. Identities = 293/744 (39%), Positives = 418/744 (56%), Gaps = 39/744 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN+ Q+ AVA + LL++AGAGSGKTRVL RIA L+ PY I+A+TFTNK Sbjct: 3 LMQGLNEPQQRAVACLQGPLLIVAGAGSGKTRVLTFRIANLLE-HGVPPYRILAITFTNK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA---HHMDANLPQDFQILDSEDQLRL 122 AA EMR R+ L+G + +W+ TFH RLLR H+ ++F I D+ D L Sbjct: 62 AAREMRERVDTLIGDAAQDVWLSTFHSFCARLLRMELEHY--GRYAKNFVIYDAADSKGL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGL--RPHHIQSYGNPVEQTWQKVYQAYQEA 180 ++ +K +N+DEK P +I+ K+ L Q+ EQ K+Y YQ Sbjct: 120 IRECLKELNIDEKHTAPGAVQAHISDAKNRLLDVAAFTAQATDFFAEQV-AKIYALYQSK 178 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF +LL+ EL + Y+++F ILVDE+QDTN QYA +LLA + Sbjct: 179 LQENNALDFDDLLMLTVELLTKNEELRMKYQKKFQYILVDEYQDTNGAQYAITKLLAAEH 238 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQSIYGWRGA + NI F D+P A I LEQNYRST NIL+AANA+IENN Sbjct: 239 RNICVVGDADQSIYGWRGADMRNIMNFEQDYPEATVILLEQNYRSTKNILAAANAVIENN 298 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQ 359 R K+LWTD G+ I++Y E +EA ++V ++ + A+LYR+NAQ Sbjct: 299 LTRKKKELWTDNPTGDRITIYEGATEKNEASYIVREVERLHTMFHVKYGDIAVLYRTNAQ 358 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR +EEA +PY + G +RF++R+EIKD ++YLR+I N D + R++N P RG+G Sbjct: 359 SRNIEEAFYATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVPRRGLG 418 Query: 420 DRTLDVVRQTSRDRQLTLWQACRE---LLQEKALAGRAASALQRFMELIDALAQETADMP 476 ++ + +T+ + +++L++ + L L+ + AL+ F ++ + P Sbjct: 419 PTSIARMMETAEEYRISLFEVITDAQLLSMIPKLSAKVKVALEEFAAMVFTFMGQLGTRP 478 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 +H + VI+ SG E+EK E + R+ENL E ++ + F E E L FL+ Sbjct: 479 IHEIVEDVIETSGYAAALEEEKKEDNRDRLENLREFISVAKNFDDGAE-EGENGLADFLA 537 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 AL + Q + V LMT H+AKGLEFP VF+ GMEEG+FP +L + +EEER Sbjct: 538 QIALISDVDQTEQSDGTVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRTLLDDTEIEEER 597 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------VRLRA 648 R YVG+TRA ++L LTYA R +YG+ RPSRF+ E+PEE VE LRA Sbjct: 598 RTCYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEADFFGGADLRA 657 Query: 649 TVS---------------RPVSHQRMGTPMVEND--SGYKLGQRVRHAKFGEGTIVNMEG 691 + P H ++ D + +K G VRH+K+G+G IV + G Sbjct: 658 PSNIWSERSTRTQRKRYIAPPQHTAADGSVIRPDVSAAFKAGDAVRHSKWGDGRIVAISG 717 Query: 692 SGEHSRLQVAFQGQGIKWLVAAYA 715 SGE + L +AF G+GIK V YA Sbjct: 718 SGEDAELSIAFPGEGIKKFVQKYA 741 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 292/744 (39%), Positives = 428/744 (57%), Gaps = 35/744 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN+KQ+EAV LL+LAGAGSGKTR ++HRIA+++ P+ I+A+TFTNK Sbjct: 3 LLSMLNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILALTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR RI + +W+GTFH + R+LR + +F I D +D R++K Sbjct: 63 AAGEMRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTKRVVKS 122 Query: 126 LIKAMNLDEKQWPPRQAMWYI-----NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 ++K +++ +K++P I N + + H G E ++Y YQ+ Sbjct: 123 ILKDLDISDKEFPVEGVKSQISLLKNNLETSDDYLEEHDDFEGGYTEARIAQIYAEYQKR 182 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LLL + L+ P +L Y+ RF ILVDE+QDTN QYA + LA D Sbjct: 183 LLSSNAMDFDDLLLNMNILFAKCPEVLNKYKNRFKYILVDEYQDTNLSQYAIVSKLAEDH 242 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + + GDDDQSIYGWRGA + NI F DF A IRLEQNYR T NIL+AAN +IE+N Sbjct: 243 RNICVCGDDDQSIYGWRGASIRNILEFEEDFEDAAVIRLEQNYRCTKNILNAANGVIEHN 302 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQ 359 R+GK L+TD +GE I A ++L+E+ + I + +G ++ AILYR+NAQ Sbjct: 303 QRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIFCLNEYHGIPYSDIAILYRTNAQ 362 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+LEE L++ ++PY+I G +F++R EIKD L+YL+LI N DD A RV+NTP RGIG Sbjct: 363 SRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDILAYLKLIVNPQDDLALIRVINTPKRGIG 422 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRF---MELIDALAQETADMP 476 +++ ++ + + ++++ + + G L F +E I L + M Sbjct: 423 PASVEKIKDYAFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIRRLPENNGLMD 482 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + + T I SG M ++ K E R+ENL+ELV A F NEE+ L+AFL Sbjct: 483 IVINT---IHLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEEN---TLEAFLE 536 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +AAL AG D V LMTLH+AKGLEF VF+ GMEE +FP+ +++E +EEER Sbjct: 537 NAALVAGVDSYDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFPTYRAVNEDSEMEEER 596 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR----------- 645 RL YVG+TRA ++L ++ AE+RR+YG+ Y PSRF+ E+P+E +E Sbjct: 597 RLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIEGTNVIKESNKEKEL 656 Query: 646 LRATVSRPVSHQRMGTPMVEN---------DSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 L++++ R + EN D G ++ H+ +G GT+V ++GSGE + Sbjct: 657 LKSSIKRIYDPYKQSPKKTENLFKQNNSFSDVDLNPGDKIDHSAWGVGTVVGVDGSGEDA 716 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 ++ AF GIK +A A+ + V Sbjct: 717 KVTAAFPEIGIKKFMAGIAKFKKV 740 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 509 bits (1310), Expect = e-142, Method: Compositional matrix adjust. Identities = 303/755 (40%), Positives = 437/755 (57%), Gaps = 48/755 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL SLN++Q EAV +L+LAGAGSGKT+ L +IA+L+ + P++I+A+TFTNK Sbjct: 4 LLASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLLE-KGVKPWNILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN-LP---QDFQILDSEDQLR 121 AA EMR R+ L+G S +W+ TFHG ++LLR D N LP F I D D Sbjct: 63 AAKEMRQRVDALVGPSAKDVWLYTFHGFCNQLLR---RDINALPGYTTSFSIYDPSDCKN 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYI----NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAY 177 +LK +K +NLDEK +P + I N+Q D + Y + ++Y Y Sbjct: 120 VLKEALKKLNLDEKFYPLPGLLATISNAKNAQVDAAAFARQAEDYH---AKKVAEIYAEY 176 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ ++ VDF +LLL +L P + + Y+ +F +L+DE+QDTN++QY +LL+ Sbjct: 177 QKHLVQSNAVDFDDLLLLTVKLLQTVPEVREKYQNKFHYVLIDEYQDTNHVQYLLAKLLS 236 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + VGD DQSIYGWRGA + NI F D+P A +LEQNYRST IL AAN +I Sbjct: 237 APENNLCAVGDIDQSIYGWRGADISNILDFEKDYPQARIFKLEQNYRSTQVILDAANEVI 296 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 ++N R K LWT+ +G+PI+ Y A ++ +EA FVV +I+ Q G L + AILYR+N Sbjct: 297 KHNAARRPKNLWTENGNGQPIAYYQARDDREEAEFVVGQIRKLQREGTKLGDMAILYRTN 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+ EE L+ +PY + G ++F++R+E+KD LSYLR ++N D ER++N P RG Sbjct: 357 AQSRMFEENLINNGVPYVMVGSLKFYDRKEVKDTLSYLRFLSNERDIQGLERIINEPKRG 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ VR D +TL + + +Q + L GRA +Q F ++I LA+ +P+ Sbjct: 417 IGAATVAKVRTLLEDSGMTLPEVL-QTVQARELLGRAFPKIQAFSDMIQELARVKDTLPV 475 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 ++V++ SG E ++ ++R++NL E + +F+ + +E+ L+ FL+H Sbjct: 476 KDLMEQVLEKSGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDPGEENNKTLEDFLNH 535 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL A A QD+V LMTLHSAKGLEFP VFI GME+G+FPSQ SL++ +LEEERR Sbjct: 536 VALVADIDDAKLTQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEERR 595 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR---------- 647 L YVG+TRA ++L LT +R +YG V + PSRF+ E+P +E V +R Sbjct: 596 LCYVGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLIENVAVRRSTYGGYGGQ 655 Query: 648 -------------ATVSRPVSHQRMGTPMVEN----DSG----YKLGQRVRHAKFGEGTI 686 T++R + TP + + G ++ G + RH KFG GTI Sbjct: 656 RGHQGSTGTHASLRTIARSRGGSILDTPAPRSRFVPEGGAVPEFRPGDKCRHKKFGTGTI 715 Query: 687 VNMEGSGEHSRL-QVAFQGQGIKWLVAAYARLESV 720 + G +L VAF G GIK L Y LE + Sbjct: 716 IEARPDGSEGQLVTVAFPGSGIKQLATKYKILEKI 750 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 289/776 (37%), Positives = 435/776 (56%), Gaps = 75/776 (9%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENC----------------- 52 +ND Q+EAV +LVLAGAGSGKT V+V+RIA ++ N Sbjct: 21 MNDMQQEAVFTVNGPVLVLAGAGSGKTTVIVNRIANMIKFGNAFYDETRSGSEEDIAFLK 80 Query: 53 ----------------------SPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG-GMWVGT 89 P++I+A+TFTNKAA E++ R+ ++G + + T Sbjct: 81 DYAAGKTDDADTLRDIVAADPIKPWNILAITFTNKAAGELKERLAAMLGEEEAVKINAST 140 Query: 90 FHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQ 149 FH R+LR+ DF I DS+D R++K ++ +++ EKQ P+ + I+ Sbjct: 141 FHSACVRILRSEITALGYGSDFTIYDSDDSQRMIKSVMAELDISEKQLAPKAVLGEISRA 200 Query: 150 KDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHIL 207 KD+ + P +++ + ++ K+Y YQE A +DF ++L EL+ P +L Sbjct: 201 KDQMITPEQLRADAGQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELFEQFPEVL 260 Query: 208 QHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRF 267 + YR R+ I+VDE+QDTN++Q+ + LL+ + +VGDDDQSIY +RGA +ENI F Sbjct: 261 EKYRTRYKYIMVDEYQDTNHVQFRLVSLLSDSHKNLCVVGDDDQSIYKFRGANIENILGF 320 Query: 268 LNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNEL 327 + F GA+ IRLEQNYRST IL+AAN++I NN GR K LWT G G+ + Y A +E Sbjct: 321 EDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYWYKAVDET 380 Query: 328 DEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQE 387 DEA FV IK + G A+ A+LYR NAQS +E L++ +PYR+YGGMRFF+R+E Sbjct: 381 DEANFVAETIKKYHKETGRYADNAVLYRMNAQSNAIERMLMKCGIPYRVYGGMRFFDRKE 440 Query: 388 IKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQE 447 IKD SYL I N ND F+R++N P RGIGD TL ++ SRD +L+ + + +E Sbjct: 441 IKDVTSYLAFINNHNDMLRFKRIINEPKRGIGDSTLALIEDISRDLKLSPFDVLK-TCEE 499 Query: 448 KALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSG----LRTMYEQEKGEKGQ 503 A + ++L+ E+ + L Q++ ++PL D V++ +G L+T+ E Sbjct: 500 YAPLAKKVTSLRNAYEMFEDLTQKSEELPLDEFLDEVMEKTGYLDYLKTL------ENAD 553 Query: 504 TRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAK 563 T+IEN++EL ++ Q+ NE +E L FL AL + D V LMT+HSAK Sbjct: 554 TKIENVQELRSSVVQY-MNESEEP--TLGGFLEEVALYTEADRDPETDDKVTLMTVHSAK 610 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+ +F+VG+++G+FPS S D +EEERRLAYV +TRA + L LT A R L+G+ Sbjct: 611 GLEYDNIFVVGLDDGIFPSSRSFDSEDDMEEERRLAYVAITRAKKHLYLTNASQRMLFGQ 670 Query: 624 EVYHRPSRFIGELPEECVEE------VRLR-------------ATVSRPVSHQRMGTPMV 664 + SRF+ E+ E +E+ +R + AT+ + ++ + Sbjct: 671 TQRNVTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTEVHSATLQQQLARNKTKPAAP 730 Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + Y G+RV H FGEGT+V++ S L+VAF+ G K ++A YA+L+ + Sbjct: 731 KEAVTYTAGERVAHNIFGEGTVVSVTPMANDSMLEVAFEKVGTKKIMANYAKLKKL 786 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 296/715 (41%), Positives = 412/715 (57%), Gaps = 13/715 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN Q EAV P LLVLAGAGSGKTRVL RIA+L+ V P+ I+A+TFTN+ Sbjct: 9 FLTELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTNR 68 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+ + +WV TFH R+LR ++F I D DQ ++K Sbjct: 69 AAREMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIKD 128 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACDR 183 +K +NL+ +Q PP I+ QK+ + P +Y E T +VY AYQ +R Sbjct: 129 CLKELNLEPRQHPPAMFSAAISWQKNALVGPAEFAGAAYDQHQELT-ARVYAAYQARLER 187 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +LL A L+ P +L+ YR RF ++LVDE+QDTN+ QY + LLA + Sbjct: 188 NNALDFDDLLFLAVRLFREFPPVLEQYRRRFLHLLVDEYQDTNHAQYVLVNLLAQTHRNL 247 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQ IYGWRGA + NI F D+P A ++LEQNYRST IL AAN +I N R Sbjct: 248 TVVGDPDQCIYGWRGADLRNILNFERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHR 307 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LWT GE L+ A +E EARFV I+ + G + + A+ YR++AQSRVL Sbjct: 308 KEKELWTARGAGEAPVLHQARDERAEARFVAREIRRLRAQGRSYRDFAVFYRTHAQSRVL 367 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+ LL+ +PY I GG++F++R+EIKD L+YL+LI N +DD A R++N P RG+G +L Sbjct: 368 EDELLRHGVPYTIIGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVPRRGVGKASL 427 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 R+ + A RE + + L+ A+ E + + + T++ Sbjct: 428 VKFFAYVRESSVACADALREADRIRGLSAGVREAMGALGEQLARWREREGGVT--GLTEQ 485 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 V+++SG T E E+ + +TR+ENL E ++ TR+F L FL+ AL Sbjct: 486 VLEESGYLTALEAERTVEARTRMENLSEFLSVTREFDLQRGGT----LAEFLNDLALYTD 541 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + D V LMTLHSAKGLEFP VF+ GMEEG+FP + E +EEERRL YVG+ Sbjct: 542 LDRFDGESSQVTLMTLHSAKGLEFPVVFLTGMEEGVFPHTRAFSEPVEMEEERRLCYVGI 601 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPM 663 TRA ++L LT AE+R LYG Y PSRF+ E+P E A + + +R T Sbjct: 602 TRARERLFLTLAESRLLYGNVYYGVPSRFLREIPPELFAGGEPEAGAAAEQAAERPETGR 661 Query: 664 VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 E ++ G RV H K+GEG +V +G+G ++++VAF QG+K L+ YA LE Sbjct: 662 AE----FRPGDRVWHGKWGEGMVVQTDGTGLDAQVKVAFPDQGVKTLMVRYAPLE 712 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 261/733 (35%), Positives = 434/733 (59%), Gaps = 25/733 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LNDKQ+EAV + LLV+AGAGSGKTRVL IA+L+ +N +P +I+A+TFTNKA Sbjct: 3 LSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI L+ +W+GTFH + R+LR + +F I D+ DQ L+K + Sbjct: 63 ANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVKEI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPH---HIQSYGNPVEQTWQKVYQAYQEACDR 183 I +N + P++A+ I+ K++ + P +I ++ E+ + +Y+ Y++ Sbjct: 123 INDLNYKD-DISPKEALNLISYCKNKSISPKEFLNINTFYAKQEEYYN-IYKNYEKKKFE 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +L+L+ EL+ + L++Y+++F + VDE+QDTN QY I+ + V Sbjct: 181 YNSLDFDDLILKTLELFAEDSNTLKYYQDKFEYLFVDEYQDTNKSQYELIKFIGKGHNNV 240 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQSIY +RGA + NI F DF A+TI+LE+NYRSTSNI++ AN LI+NN+ R Sbjct: 241 RVVGDADQSIYSFRGADINNILDFEKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSER 300 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K LWT DG + + E +E +FV++ I + ++G L + AILYR NAQSR+ Sbjct: 301 KEKNLWTSKNDGSEVLYKKSSVESEEGKFVIDEINSLLNDGYRLKDMAILYRMNAQSRIF 360 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P +GIGD+T+ Sbjct: 361 EEYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKILVNPKDDISLKRIINEPKKGIGDKTV 420 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + +L + + L + S+ ++F + + D + + Sbjct: 421 EKLEKEANKLGFSLTELVCDPSLFSNLPSKLKSSCEKFYNPLAEIFDNYKDYDIVELIEE 480 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ SG E+ + ++RI+NL E +++ ++ N +++ + +L + +L + Sbjct: 481 ILDKSGYIRALEESYSVENRSRIDNLNEFISSAAEYQSNNPEDN---IHDYLENLSLLSD 537 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + + D++ LMT+HSAKGLEF F+VGM+EG+FPS+ S+DEG +EEERR+ YV + Sbjct: 538 LDKTEDKDDSISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSIDEGN-IEEERRICYVAI 596 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV--------- 654 TRAM+KL L+ AE RR +G+ VY++PSRF+ E+ + + + P Sbjct: 597 TRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQDKTPAYSPYVKMKSNEAY 656 Query: 655 -------SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 S + T + +++G ++ H K+GEG IV ++ S + + L VAF +G+ Sbjct: 657 MRDKARESVLKKNTVKESSKEDFQIGDKIIHTKWGEGMIVQVKKSDDGNELVVAFDKKGL 716 Query: 708 KWLVAAYARLESV 720 K L YA ++ + Sbjct: 717 KKLNQDYAPIKRI 729 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 508 bits (1307), Expect = e-142, Method: Compositional matrix adjust. Identities = 290/669 (43%), Positives = 403/669 (60%), Gaps = 28/669 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN QR+AV L+VLAGAGSGKTRVL R+AW++ + SP ++AVTFTNKA Sbjct: 6 LHHLNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVTFTNKA 65 Query: 67 AAEMRHRIGQLMGTSQGG----MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 A EMR+R+ L+G W+GTFHG++ R+LR + +DF ILDS DQ RL Sbjct: 66 AKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSSDQERL 125 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-----QKVYQAY 177 KRL + + + W P++ I KD+G+RP + + + W Q++Y+ Y Sbjct: 126 FKRLCEELGFADAYWTPKRLTHTIGRWKDDGIRPQDLTD--REIRKAWERARIQQMYERY 183 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+A ++ +DF +LLL +LW +P IL +++RF +LVDE+QDTN++QY WI L+ Sbjct: 184 QQALLQSNAMDFGDLLLHCLQLWQQEPAILAAFQQRFRYLLVDEYQDTNHVQYRWICALS 243 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G + +VGDDDQSIY WRGA++ENI +F DFP + IRLEQNYRS+ NIL AA+ LI Sbjct: 244 GLHQNLCVVGDDDQSIYSWRGARIENILKFEEDFPQTKIIRLEQNYRSSGNILKAASGLI 303 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 +N GR+ K+LWT+ A G+ I Y A N+ DEARFV + I T G + AIL R+ Sbjct: 304 NHNKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVASEILTLCP-AGDYQQAAILVRTA 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q+R LEE L++A +PY++ GG+RF +R E++DAL+YLR++A+ DD AFERV+N P RG Sbjct: 363 RQTRSLEEGLMRAGIPYQVVGGLRFLDRAEVRDALAYLRVVASNRDDVAFERVINLPKRG 422 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--M 475 IG L +R+ + + +L A R ++ + G AA L F++LI+ AD Sbjct: 423 IGPGALQSLREIASQERCSLLHAARFAVESNTMKGAAAKGLAAFIQLIEHARSMLADDIT 482 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 P + T +++ SG R EKG RI+NL+EL A + LQ FL Sbjct: 483 PAEMLT-KLLALSGYRDYVRDL--EKGNDRIDNLDELRNALARTE---------SLQLFL 530 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LE 593 AL + V + TLH+AKGLEFP VF+VG+EE + P +++L E LE Sbjct: 531 EEVALATDLQDGGPVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHKLALTEQPEIGLE 590 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRLAYVG+TRA Q+L LT A R L+ K V SRF+ ELP+E +E+ R + R Sbjct: 591 EERRLAYVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLKELPQEILEDRGFRVSSRRG 650 Query: 654 VSHQRMGTP 662 + G P Sbjct: 651 ATGSLAGLP 659 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust. Identities = 300/716 (41%), Positives = 422/716 (58%), Gaps = 74/716 (10%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ LN +QR AV +LVLAGAG+GKTRVL RIA +++ P I+AVTFTNKA Sbjct: 42 LEGLNPEQRLAVETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKA 101 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RIG L+G + GM W+GTFH + +LLR H A L F ILD++DQ+RLLK+ Sbjct: 102 AREMKTRIGVLVGQAIEGMPWLGTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRLLKQ 161 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQEA 180 LI+A LD+K+WP RQ I+ K++GL P I +++GN + +Y AYQ+ Sbjct: 162 LIQAEALDDKRWPARQLAMMIDGWKNKGLGPADIPEGDARAFGN---GKGRALYAAYQQR 218 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA--- 237 DF +LLL ++ P +L+ Y +F ILVDE+QDTN QY W+RLLA Sbjct: 219 LKTLNATDFGDLLLHPIRIFREHPDVLREYHAKFKYILVDEYQDTNTAQYMWLRLLAQRP 278 Query: 238 -------------------GDTGK------------------------VMIVGDDDQSIY 254 GD + + VGDDDQSIY Sbjct: 279 GSPGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNICCVGDDDQSIY 338 Query: 255 GWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGAD 314 GWRGA+V+NI RF DFPGA IRLE+NYRST++IL AA+ LI +N GRLGK L+T+ +D Sbjct: 339 GWRGAEVDNILRFEKDFPGATVIRLERNYRSTAHILGAASHLIAHNEGRLGKTLFTEHSD 398 Query: 315 GEP--ISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASM 372 + + ++ A++ +EAR + I+ Q G AL + AIL R++ Q R E+ + + Sbjct: 399 PDAPRVKVHAAWDSEEEARALGEEIEALQAKGHALNDMAILVRASFQMREFEDRFVTLGL 458 Query: 373 PYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRD 432 YR+ GG RF+ERQEI+DAL+Y R++A DD AFER+VN P RG+G+ + + +R Sbjct: 459 SYRVIGGPRFYERQEIRDALAYFRVVAQGADDLAFERIVNVPKRGLGESAVRQIHDVARM 518 Query: 433 RQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ-TDRVIKDSGLR 491 R + L QA R+L+ + L + ++L+ +E + Q D H++ + ++++SG Sbjct: 519 RGVPLLQAARDLVGTEELKPKPRASLRNLVESFERW-QGLLDRTRHIELAETILEESGYT 577 Query: 492 TMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ 551 M++ ++ + R+ENL+EL+ + ++ L+AFL H AL + + D Sbjct: 578 DMWKNDRSAEAPGRLENLKELIRSMEEYES---------LRAFLEHVAL-VMDAERDEEL 627 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQK 609 DAV LMTLHSAKGLEF VF+ G EEG+FP Q SLDEGGR LEEERRLAYVGVTRA + Sbjct: 628 DAVSLMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGVTRAKKN 687 Query: 610 LTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV---SRPVSHQRMGTP 662 L + + RR++G PSRF+ ELPE+ VE + RP++ ++ G P Sbjct: 688 LHIWFTSNRRIHGLWQSTIPSRFLDELPEKHVEVTDDGGSFGGYGRPIADRQPGRP 743 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 313/803 (38%), Positives = 429/803 (53%), Gaps = 109/803 (13%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN QR+AV +L+LAGAG+GKT+ L RIA LM+ P I+AVTFTNKA Sbjct: 37 FEGLNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGGARPDEILAVTFTNKA 96 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM +RIG L G S G W+GTFH + +LLR H L +F ILD++DQLRLLK+ Sbjct: 97 AREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSNFTILDTDDQLRLLKQ 156 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACDRA 184 LI+A ++DEK+WPPR I+ K++ P + + + +Y AYQ Sbjct: 157 LIRASSIDEKRWPPRMLAGIIDGWKNKAWTPAQVPVGESSAYDDKGIDLYAAYQHRLKEL 216 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LLL ++ IL Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 217 NACDFGDLLLHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQGHKNIC 276 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIYGWRGA+V NI F DFPGA +RLEQNYRST +IL AA +I+ N RL Sbjct: 277 CVGDDDQSIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDRL 336 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-----NGGALAECAILYRSNAQ 359 GK L+TDG DGE + L ++ +EAR++ I++ Q + L AIL R++ Q Sbjct: 337 GKTLFTDGEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRGLDAMPLNSMAILVRASHQ 396 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 R E+ L +PYR+ GG RF+ER EI+DA++Y RL +++DD AFER+VNTP RG+G Sbjct: 397 MRSFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSQDDDLAFERIVNTPKRGLG 456 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID---------ALAQ 470 D+ + ++ T+R + L + R + + GR +AL+ ++ +D + +Q Sbjct: 457 DKAVQTIQITARTNGVNLIEGARLCVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQSQ 516 Query: 471 ETA---------------DMPL-----------HVQTDRVIKD-SGLRTMYEQEKGEKGQ 503 D P HV+ VI D G ++ EK + Sbjct: 517 SNGVTRGDMADDDESVIDDGPTVEVFDGASNVNHVELAEVILDECGYTAHWQNEKTPEAP 576 Query: 504 TRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAK 563 R+ENL+ELV A F LQ FL H +L + D D V +MTLH AK Sbjct: 577 GRLENLKELVKALENFD---------SLQGFLEHISLIM-DNAKDEEDDKVTIMTLHGAK 626 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 GLEFP V++ G E+G+FPSQ S+DE G LEEERRLAYVG+TRA + T+++ +R +Y Sbjct: 627 GLEFPSVYLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEKHCTISFTSSRLVY 686 Query: 622 GKEVYHRPSRFIGELPEECVEEVRL------------RATVSRPVS-------HQRMGTP 662 G+ PSRFI ELPEE VE + + + PVS H++M Sbjct: 687 GQWQSQMPSRFIDELPEENVEVLTPPGLYGGGFGAAGMSARANPVSEGIASTLHEKMAKA 746 Query: 663 MVENDSGYK-------------------------------LGQRVRHAKFGEGTIVNMEG 691 V N G++ G+RV H KFG G ++ +EG Sbjct: 747 DVYNSPGWRRLQSRSQQRSMSQPKESRNSVIDMKATSSFTTGERVFHQKFGYGEVMEIEG 806 Query: 692 SGEHSRLQVAFQGQGIKWLVAAY 714 +L + F G K +VA + Sbjct: 807 ----DKLLIEFDKAGEKKVVAKF 825 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 268/735 (36%), Positives = 427/735 (58%), Gaps = 27/735 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN QR+AV LLVLAGAGSGKTRVL IA+L+ +N P +I+A+TFTNKA Sbjct: 3 LDGLNKMQRKAVLHDEGPLLVLAGAGSGKTRVLTTSIAYLIEEKNIDPRNIIAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI +L+G +W+GTFH + R+LR + ++F I D+ DQ L+K + Sbjct: 63 ANEMKERISKLLGMDVSHLWIGTFHSICARILRMNIDKIGYDRNFTIYDTSDQKTLIKEI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ--TWQKVYQAYQEACDRA 184 I + + PR A+ I+S K++ L P + + ++Y+ Y+E Sbjct: 123 INELGYKD-DIAPRDALNVISSAKNKSLDPDEFLKLNTYYSKGDIYYEIYKKYEEKKFYY 181 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+ + L++ L Y+++F + VDE+QDTNN QY I+ AG V Sbjct: 182 NALDFDDLIDKVLYLFVRSKETLDFYQKKFEYVFVDEYQDTNNSQYELIKYFAGFHNNVT 241 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIY +RGA + NI F DF AETI+LEQNYRST NIL AN LIENN+ R Sbjct: 242 VVGDADQSIYSFRGANISNILNFEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERK 301 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+LWT+ G+ + E +EA+FV++ IK+ G + AILYR+NAQSR E Sbjct: 302 DKELWTENKGGDRVIYKANSVESEEAKFVLDNIKSLMQEGYDAKDFAILYRTNAQSRPFE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P RGIG+++++ Sbjct: 362 EILMKNLLDYKVVGGLKFYDRKEIKDLVSYLKILVNPKDDLSLKRIINEPKRGIGNKSIE 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 +++ + + + + ++ R + ++F + + + + + V Sbjct: 422 ELQRVANLHNIAILDLITDDSFNTLISDRIKKSTEKFYLPLREIFDNVDNYKIVDLIEDV 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + SG E + + RI+N+ E +++ ++ N ++++ +L + +L + Sbjct: 482 LDKSGYMKSLESSYSVEDRARIDNINEFISSASEYQENNPEDNIYD---YLENLSLLSDL 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + ++ +++ LMT+H+AKGLEFP VF+VG++EG+FP + S+DEG +EEERRL YV +T Sbjct: 539 DKTESTDNSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRSIDEGN-IEEERRLFYVAIT 597 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP-------------------EECVEEVR 645 RA +KL L+ AE RR YGK V+++PSRFI E+ E+ + E Sbjct: 598 RAQEKLFLSSAEARRNYGKPVFYKPSRFIDEIIDNIKVEEKISSYGYSSREYEKTMAEDY 657 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 +R + V +++ +D YK+G R+ HAK+G G +V ++ + + L VAF + Sbjct: 658 MREKTRQSVLGKKLNKTSASDDE-YKVGDRIVHAKWGSGMVVQIKKQDKGNELVVAFDEK 716 Query: 706 GIKWLVAAYARLESV 720 G+K L YA +E V Sbjct: 717 GLKKLNQDYAPIEKV 731 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 505 bits (1301), Expect = e-141, Method: Compositional matrix adjust. Identities = 293/774 (37%), Positives = 427/774 (55%), Gaps = 64/774 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 ++ LND Q++A LL+LAGAGSGKTRV+ HR+A+LM E +P +I+A+TFTNK Sbjct: 16 IMAGLNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNK 75 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ ++G +WV TFH L R+LR + ++F I DS+DQ +K Sbjct: 76 AAREMRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFDIYDSDDQKSTVKS 135 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDR 183 ++K +D K++P + M I+ K++ + P ++ + +VY YQ + Sbjct: 136 ILKDFQIDPKRYPEKMFMSEISKAKEKYMSPDEFARRNAADYAATKVAEVYTEYQGRLKK 195 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +L+ + EL+ + P +L Y+ RF I+VDE+QDTN+IQ+ +++LA + Sbjct: 196 NNAMDFDDLIYKTVELFEHNPDVLDTYQNRFRYIMVDEYQDTNHIQFLMVKMLARKYRNL 255 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA + NI F ++ A+ I+LEQNYRS NIL+AANA+I++N GR Sbjct: 256 CVVGDDDQSIYKFRGANITNILNFEKEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGR 315 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K LWTD GE IS E E V +RIKT G + AILYR+NAQSRVL Sbjct: 316 KDKALWTDQDAGEKISFDQCDTEYAEGDLVASRIKTLVRQGVGYRDIAILYRTNAQSRVL 375 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E ++ A++PYR+YGG F+ R+EIKD L+YL++I N D+ F RVVN P RGIG+ +L Sbjct: 376 GEKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNTTDNLYFRRVVNVPKRGIGEASL 435 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPLHVQTD 482 V + L++ A + +A + + +++F LI + D L D Sbjct: 436 SKVESFADAYGLSMMDAAARADEIPGMAVKTSGKIKQFATLIQSFRDMLQDGESLDAVYD 495 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 R+++D+G + E E+ TR+EN++EL +F +E+E+ L FL AL + Sbjct: 496 RILEDTGYESELIAEHTEESMTRLENIDELRNKVVEFV--DENEE-AGLSEFLEEIALVS 552 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLAY 600 + V+LMTLHSAKGLEFP VFI GME+ +FPS M+L D+ LEEERRL Y Sbjct: 553 DLDSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNSDDPDALEEERRLCY 612 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-EVRLRATVSR------- 652 VG+TRAM+KL L+ A R ++G + SRFI E+P E E +R R Sbjct: 613 VGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIPPLLFEHEADMRNMAKRRETESVD 672 Query: 653 ---------------------------------------------PVSHQRMGTPMVEND 667 P + G V + Sbjct: 673 RYNRGDLYSDSSYGSSYNYKPRTPGKEYGQKNPYSSYARQKSYGQPSTQPAFGKAFVVSA 732 Query: 668 SG---YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 SG Y++G RVRH KFG GT+ N+E + + V F G++ + A++A+L+ Sbjct: 733 SGKPDYEVGDRVRHIKFGVGTVENLEKGDKDYEVTVNFDRCGVRKMFASFAKLK 786 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 287/753 (38%), Positives = 426/753 (56%), Gaps = 49/753 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QR+A +++AGAG+GKT+VL RIA+L+ + P+ I+A+TFTNKA Sbjct: 5 LDMLNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI Q++G + +W+GTFH +LLR P F I D+ D LLK + Sbjct: 65 ANEMKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSLLKSI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQ---------TWQKVYQA 176 IK MNLD+K + P + I+S K+ R Q Y NP+ Q ++Y Sbjct: 125 IKEMNLDDKTYTPNTVLSRISSAKN---RLITAQEYINNPIYQQDDEEAMKPKVGEIYVQ 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y + C +AG +DF ++LL + L IL Y+ERF IL+DEFQDTN QYA ++ L Sbjct: 182 YAKRCLQAGAMDFDDILLNTYLLLNQHLDILYKYQERFQYILIDEFQDTNLAQYAIVKDL 241 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 AG + +VGDD QSIY +RGA + NI F D+P I+LEQNYRST NI+ AAN + Sbjct: 242 AGIHKNICVVGDDAQSIYAFRGANIRNILNFEKDYPNLTIIKLEQNYRSTQNIVEAANGI 301 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYR 355 I NN +L K +WT GE I L A + +E R V I + N + AILYR Sbjct: 302 IRNNQLQLKKNVWTANEKGEVIGLIRATTDAEEGRLVAASIFEIKMQNQLRNEDFAILYR 361 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +N+QSR +EEAL + ++PYR+ GG F++R+E+KD L+YLR I N ND+ A +R++N P Sbjct: 362 TNSQSRAIEEALRKINLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEPK 421 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQA-CRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG ++ + + D + LW+ C + L+GR A A++ F +I A+A + Sbjct: 422 RGIGPSNIEKMVVAASDHGIPLWEVMCN---AKNFLSGRVAEAVEEFAHMIQAMALDLTK 478 Query: 475 MPLHVQTDRVIKDSG-LRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + + K SG L+++YE +K +G R EN++EL++ + F+ N E D L Sbjct: 479 KDAYEIASEIAKRSGLLKSLYE-DKTVEGLARYENVQELLSGIKAFTANPEQVD-TSLAT 536 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL AL + +D + LMT+H+AKGLEF V+IVG+EE +FPS M L LE Sbjct: 537 FLQDVALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIVGIEEDLFPSSMMLGSREDLE 596 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL----------------- 636 EERRL YV +TRA +K+ L+Y +R +GK SRFIGE+ Sbjct: 597 EERRLFYVALTRAQKKVFLSYTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEK 656 Query: 637 -----PEECVEEVRL----RATVSRPVSHQRMGTPMVE--NDSGYKLGQRVRHAKFGEGT 685 ++ + +R+ ++ + ++ + P + + S K G +V H FG G Sbjct: 657 SNTNYTKQFISSMRITPQQKSVKVKFQAYAQSSKPAFQPSDTSQLKSGMQVEHPTFGIGM 716 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 ++++E +G H + ++AF G K L+ ++A+L+ Sbjct: 717 VISVELTGTHKKARIAFSESGEKTLLLSFAKLK 749 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 288/742 (38%), Positives = 425/742 (57%), Gaps = 38/742 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +N +Q EAV LL+LAGAGSGKT VL++RIA+++ P+ I+A+TFTNKA Sbjct: 8 LKKMNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILAITFTNKA 67 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A E++ R+ ++G + G +W TFH R+LR F + D++D RL+K Sbjct: 68 AGELKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDSKRLVKDC 127 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ--KVYQAYQEACDRA 184 KA+N+D+K + + I+ KD L P Q+ + + VY+ YQ+ A Sbjct: 128 QKALNIDDKMISHKSILSEISHAKDSMLSPADYQAAAGSDFRLAKIGAVYELYQKRLREA 187 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL EL+ P +L++Y+ RF I+VDE+QDTN +QY ++RLLA + + Sbjct: 188 DAMDFDDLLGNTVELFRQCPDVLEYYQNRFRYIMVDEYQDTNQVQYEFVRLLAEKSKNLC 247 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA +ENI F +P A+ IRLEQNYRST NIL+AANA+I NN R Sbjct: 248 VVGDDDQSIYKFRGATIENIMSFEKSYPNAKVIRLEQNYRSTKNILNAANAVISNNEERK 307 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 GK LWT+ +G+ I ++ + NE DEA FV I G ++ A+LYR N+QS +LE Sbjct: 308 GKTLWTENPEGDKIQIHTSSNEQDEAGFVATTILEQVAKGRKYSDFAVLYRMNSQSNILE 367 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 + +++ +PYRI GG RF+ER+EI+D ++YL +I N +D+ R+VN P R IGD+T+ Sbjct: 368 KVFVKSGIPYRIIGGHRFYERREIRDMIAYLSVINNPSDEIRLRRIVNQPKRSIGDKTI- 426 Query: 425 VVRQTSRDRQLTLWQACRELL---QEKALAGRAASALQRF----MELIDALAQETADMPL 477 T+ + L ++ E+L E RA+ L+ F ELIDA E+ + L Sbjct: 427 ---ATASEIAGALGESLLEVLGRADEFDSLRRASVKLKAFYDMMQELIDANDDES--VSL 481 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 H + +++ +G EK E+ +TRIEN+ EL A+ + EE+ + L AFL Sbjct: 482 HELYELILEKTGYIEALRGEK-EEAETRIENINEL--ASNLLKFQEENGEEATLSAFLEE 538 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 +L D D V +MT+HSAKGLEFP VF+ G EEG+FP ++ + ++EERR Sbjct: 539 VSLMTDIDNYDETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFPGLQAIYDPNEIQEERR 598 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------------ 645 L YV +TRA + L L A++R L+G +RPSRF E+P + + + R Sbjct: 599 LCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIPLDLINKTREQDWRKPDLGTK 658 Query: 646 -------LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 LR + H TP + + +K G V+H FG+G +++ G L Sbjct: 659 MPVAETELRRKSATAAMHFGQVTPPARSGNVFKTGDMVQHKTFGKGLVISATPMGNDVLL 718 Query: 699 QVAFQGQGIKWLVAAYARLESV 720 ++AF+ QG K L+A +ARL V Sbjct: 719 EIAFE-QGTKKLMANFARLAKV 739 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 275/755 (36%), Positives = 434/755 (57%), Gaps = 53/755 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L+SLN++Q+ AV+ L VLAGAGSGKT+VL RIA+L+ + C I+ VTF Sbjct: 1 MSSYLNSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA+EMR R+ +L+ + W+GTFH + +++LR + L +F I+D+ DQ++ Sbjct: 61 TNKAASEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLDQIK 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEA 180 L+K ++ A N+D K+ PP+Q +YI+ K++ L P ++ KVY+ YQ+ Sbjct: 121 LIKNILSAENIDIKKNPPKQIAFYIDQWKNKALLPEQVKLKNQEFNLVNALKVYKIYQKK 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +L+L + I + Y+ F ILVDEFQDTN +Q W++LL + Sbjct: 181 LLVMNCVDFGDLILHVVTILKKFEDIKKIYQRNFKYILVDEFQDTNYVQNFWLQLLTSEK 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY WRGA+V+NI F N++ +TI+LEQNYRST NIL++A +LI NN Sbjct: 241 KNICVVGDDDQSIYSWRGAEVKNILEFKNNYQNTQTIKLEQNYRSTENILNSATSLISNN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RL K +W++ DGE + + F+ + EA V + I+ L E +IL R+ Q+ Sbjct: 301 EDRLEKNIWSELGDGEKVKIKSYFDGISEATGVSDIIEQNLSKKFKLNEISILVRAAFQT 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R EE ++ +PYRI GG++F+ER EIKDAL YLRLI +DD +FER++N P R IGD Sbjct: 361 REFEERFIKIGLPYRIIGGLKFYERSEIKDALGYLRLINQSSDDISFERIINNPKRSIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++ + +R++ L+L+ A +E+L+E L + L+ F+ + + Q+ D+ Sbjct: 421 SSIKKIHDFAREKDLSLFDASKEILKENILKPKTIQNLKSFLVNMISWKQKCKDIDHISL 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG +M + E+ + R+ENL+EL ++ + +S L FL + +L Sbjct: 481 LEIVLDESGYSSMLKNERTPEADARLENLKELKSSMKNYS---------SLNEFLENISL 531 Query: 541 EAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERR 597 + + W + + +MT+HSAKGLEF VF+ G EEG+FP Q S+DE G +EEERR Sbjct: 532 QTAIDEE--WDGEKINIMTIHSAKGLEFDAVFLPGWEEGLFPHQKSIDEKGADGIEEERR 589 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGK-----EVYHR-PSRFIGELPEECVEEV------- 644 LAYV +TRA ++L +++A R+ YG+ + Y SRFI E+ ++ + Sbjct: 590 LAYVAITRAKKELFISFANQRKFYGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTED 649 Query: 645 --------------------RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEG 684 RL+++ + EN + + +G+ V+H FG G Sbjct: 650 EFIFDQDFNIEGKKNSPGWNRLKSSFANKNEENIKTISYTENFTDFTVGETVKHEGFGLG 709 Query: 685 TIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 I++++G ++L + F QG K ++ + + S Sbjct: 710 KIIHIDG----NKLLINFNEQGEKKVIDKFIQKTS 740 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 499 bits (1286), Expect = e-139, Method: Compositional matrix adjust. Identities = 305/722 (42%), Positives = 423/722 (58%), Gaps = 25/722 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLN Q+EAV LV+AGAGSGKTR +VHRIA+L+ P I+AVTF Sbjct: 1 MSDLLSSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ +++G +WV TFH A R+LR + L F I D +DQ L Sbjct: 61 TNKAAGEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS---YGNPVEQTWQKVYQAYQE 179 LK ++K + L+ K P R + I + + GL + ++ G + +VY+ YQ Sbjct: 121 LKEVLKELELEAKPGPFRAMIDRIKN-RGAGLAEYMREAPDFIGGVPKDAAAEVYRKYQS 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 G +DF +LLL EL+ P +L ++R I VDE+QDTN +QY RLLAG+ Sbjct: 180 GLRMQGALDFNDLLLLTIELFEQHPEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLAGE 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +M+VGD DQSIYG+R A + NI F D+PGA IRLE+NYRS+S+IL ANA+IE Sbjct: 240 RPNLMVVGDPDQSIYGFRSADINNILDFTKDYPGARVIRLEENYRSSSSILRVANAVIEK 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N RL K L GEP+ LY A N +EA FV I G + A+LYR+NAQ Sbjct: 300 NALRLEKVLRPTRPGGEPVRLYRAPNAREEAAFVAREIVKL----GNFQQIAVLYRTNAQ 355 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+LEE L +A++P R+ G + FFER+EIKD L+Y R+ N D R+VNTP RGIG Sbjct: 356 SRLLEEHLRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPPRGIG 415 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T+ + + ++ T+++A R + E+ ++ +Q F+ L+D L + + Sbjct: 416 ATTVSRLVEHAQKTGTTVFEAFR--VAEQVIS--RPQQVQAFVRLLDELIEAAFESGPTA 471 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 RV++ +G R +QE G+ R++N+EEL+ A + + E+E+ L FL A Sbjct: 472 FFQRVLEQTGFREALKQEP--DGEDRLQNVEELLRAAQDW----EEEEGGSLSDFLDSVA 525 Query: 540 L--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L +A E Q D +AV LMTLH+AKGLEFP VF+VG+EE + P + SL LEEERR Sbjct: 526 LTAKAEEPQGDAPAEAVTLMTLHNAKGLEFPTVFLVGLEENLLPHRNSLHRLEDLEEERR 585 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA ++L L+YAE R YGK Y RPSRF+ ++P++ ++EV V Q Sbjct: 586 LFYVGITRAQERLYLSYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVLPQ 645 Query: 658 RMGTPMVEND-SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 P + +K G++VRH KFG GT+V G GE + V F G G+K L +A Sbjct: 646 ARPEPKPRTQLAEFKGGEKVRHPKFGSGTVVAAMG-GE---VTVMFPGVGLKRLAVKFAG 701 Query: 717 LE 718 LE Sbjct: 702 LE 703 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 263/644 (40%), Positives = 407/644 (63%), Gaps = 22/644 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + +LN +Q++A LL+LAGAG+GKT+VL RIA ++ P++I+AVTFTNK Sbjct: 10 FMHTLNSEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIQQNLALPHNILAVTFTNK 69 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--AHHMDANLPQDFQILDSEDQLRLL 123 AA EM R+ L+ G+ +GTFH +A ++LR +++ L F I+ +DQL L+ Sbjct: 70 AAKEMSERVHNLINCY--GVNIGTFHSMAAKILRDQIENLNLGLNNKFTIISHDDQLTLV 127 Query: 124 KRLIK-AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN--PVEQTWQKVYQAYQEA 180 K ++K ++D K++ P+ I+ KD+GL P + + P+++ + +Y+ YQ+ Sbjct: 128 KDIVKLKKDIDTKKYTPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLIYEEYQKN 187 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + ++DF +LLL +EL++ P IL++Y+E++ IL+DE+QDTN QY W R+LA Sbjct: 188 LLISNVLDFGDLLLYNNELFIKNPEILKYYQEKYRYILIDEYQDTNIAQYLWARMLASLY 247 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIYGWRGA+V NI RF DF GA I+LEQNYRST IL+AA+ +I NN Sbjct: 248 RNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASNVINNN 307 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQ 359 R K LWTD A GE I + ++ +EAR++ I K ++ AIL R+ Q Sbjct: 308 KNRHSKTLWTDSASGEKIKIISCLSDKEEARYIACEIDKLVREERYHAGNIAILVRAGFQ 367 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +R EEA + ++MPY+I GG+RF+ER EI+D L+Y+R+ N+ND+ A ER++N P R IG Sbjct: 368 TRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVPKRAIG 427 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLH 478 +L+ +R + +R ++ + A +E+L+ ++ +L+ + ID ++ D P++ Sbjct: 428 AASLNKIRSYALERNISNFVAIKEILETGIFKAKSYESLKDLLTKIDNWYEKFITDTPIN 487 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V ++ DSG +M ++EK E+ RIEN+ E++ A +F+ + F+ H+ Sbjct: 488 V-VKTILDDSGYLSMLQEEKTEEAFGRIENINEMLRAIAEFN---------DIHDFIEHS 537 Query: 539 ALEAGEGQADT-WQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEE 595 +L +T + +V +MTLH+AKGLEF VF+ G EEG+FPSQ SLDE G LEEE Sbjct: 538 SLVMENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKGLEEE 597 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 RR+AYVG+TRA + L +T+AE+R+++ + V+ PSRFI E+P+E Sbjct: 598 RRIAYVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPDE 641 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 276/769 (35%), Positives = 424/769 (55%), Gaps = 58/769 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ LL N +Q EA A +LVLAGAGSGKTRVL +RIA ++ Y+I+A+ Sbjct: 1 MDLKKLL---NKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI +L+ + MWV TFH R+LR ++F I DS DQ Sbjct: 58 TFTNKAAGEMKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-----VYQ 175 L+K+ +K +N+ +K ++ + I QKD + + Y E+ ++K VY Sbjct: 118 NLVKQCMKELNISDKDINEKEIISKIGKQKDNLITA---EEYKKRNEKDFRKNRIADVYL 174 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + +DF +L+ + EL+ P +L+ Y+ +F I+VDE+QDTN QY +++ Sbjct: 175 LYQKKLKNSNALDFDDLIFKTVELFKKHPEVLEFYQNKFKYIMVDEYQDTNKTQYQLVKM 234 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA + +VGDDDQ IY WRGA ++NI F D+P A+ ++LE+NYRS +NIL+AAN Sbjct: 235 LAAAHRNIFVVGDDDQCIYQWRGADIKNILDFEKDYPEAKVVKLEENYRSKANILNAANT 294 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILY 354 +I++N+ R K L T +GE I +Y A++++DE F+ N IK + + + AILY Sbjct: 295 VIKHNSQRKNKVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIKKENRSYKDFAILY 354 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSRV E+ ++ +PYRI GG++F++R+EIKD +YL+ I N DD + +R++N P Sbjct: 355 RTNAQSRVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVP 414 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 R IG T+ ++ + ++ ++ L+ R+ S++ +F LI+ + Sbjct: 415 KRAIGAATVSKIQDFANYMDECMYSVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDK 474 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + + +++ +G + + +RIEN++ELV+A +F ED+ L AF Sbjct: 475 VSVSNLIQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVEFENTSEDK---SLSAF 531 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L L + D D +MTLHSAKGLEFP VF+VGME G+FP SL+ +EE Sbjct: 532 LEKITLVSDVDNYDEDTDTTVMMTLHSAKGLEFPVVFMVGMENGIFPGAQSLENFAEMEE 591 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP---EECVEEVRLRATVS 651 RRL YVG+TRA ++L +T A TR+++G+ V + S FI E+ +E V E R + V Sbjct: 592 SRRLCYVGITRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESAVK 651 Query: 652 RPV-------------SH--QRMGTPMVE----------------NDSGYK--------- 671 SH G E N+ G K Sbjct: 652 SSTVRLNSVANGATISSHSLSSFGVKKAEKTINSILSNSYTSQGSNEKGNKKDLNLDEIT 711 Query: 672 LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G++V H KFG GTIV+ + ++ +AF GIK L+ + A ++ + Sbjct: 712 VGRKVSHDKFGVGTIVSATKTNNDVKVTIAFDNMGIKQLMFSMAPIKLI 760 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 300/716 (41%), Positives = 419/716 (58%), Gaps = 27/716 (3%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ LL LN+ QREAV LL+LAGAGSGKTRVL HRIA+L+ P I+A+T Sbjct: 9 DLDALLAGLNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAIT 68 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EMR R+ L+G MWV TFH R+LRA + F I D D R Sbjct: 69 FTNKAAQEMRERVEMLVGRRTRAMWVMTFHSACARMLRADAHRLGYTRQFTIYDQSDARR 128 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH--HIQSYGNPVEQTWQKVYQAYQE 179 L+KR I+ +++D K++ P I+ K++ LR + Q G+ EQT VY+ Y+ Sbjct: 129 LVKRAIEELDVDPKRFTPGAIHHEISDAKNK-LRDAEAYAQMVGSFFEQTVADVYKLYES 187 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 R +DF +LL+RA + P + + Y + F ++LVDE+QDTN++QY W++L+AG+ Sbjct: 188 ELHRMNAMDFDDLLVRAVNVLELFPEVRRRYADNFRHVLVDEYQDTNHVQYRWLQLIAGE 247 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDD QSIYG+RGA + NI F +DFP A+ ++LEQNYRST IL AANA+I N Sbjct: 248 HRNLAVVGDDSQSIYGFRGADIRNILDFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRN 307 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N G+ K+LWTD G+PI + +E EARFV I+ D G + E A+ YR+NAQ Sbjct: 308 NRGQREKELWTDLGIGDPIKVRELDDEHAEARFVAGEIERIVDEGVSRNEIAVFYRTNAQ 367 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRVLE+ L++A + Y++ GG +F+ER EIKDA++YL ++ N D +F R+ N+P RGIG Sbjct: 368 SRVLEDTLVRAQIGYQVIGGTKFYERAEIKDAIAYLTMLVNPQDVVSFTRIANSPRRGIG 427 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA-DMPLH 478 +L V + +T+W+A E L A + RFM + L + A + P+ Sbjct: 428 QTSLSRVISWANTAGITIWEAALEPDSVPGLGTAARKSFHRFMGAMRILGERAAANPPVS 487 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP-LQAFLSH 537 V+ +SG E ++ + Q RIENLEELV ++ + + + P L FL Sbjct: 488 ELLKEVLSESGYLEALEADRTIESQGRIENLEELVNVAAEYDGSVDLREEAPSLAGFLQQ 547 Query: 538 AALEA-GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 AL A +G+ D + V LMTLH+AKGLE+P VF++G EEG+FP Q +++EG LEEER Sbjct: 548 IALVADADGRRDD-EGLVTLMTLHNAKGLEYPIVFLLGCEEGVFPHQRAIEEG-GLEEER 605 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP----------EECVEEVRL 646 RLAYVG+TRAM+ L +TYA TR ++G Y SRF+ E+P V R Sbjct: 606 RLAYVGLTRAMRDLYMTYARTRAVFGSRSYGARSRFVDEVPIGLTDRNERPSLGVGSARE 665 Query: 647 RATV------SRPVSHQRMGTPMVENDS---GYKLGQRVRHAKFGEGTIVNMEGSG 693 RAT S P+ + Y++G V HA FGEG ++ +E G Sbjct: 666 RATSWSTPLGSGPIPGGGWDSGGGGGGGGGEAYRMGDDVVHAAFGEGVVIAVESGG 721 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 302/803 (37%), Positives = 423/803 (52%), Gaps = 96/803 (11%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LL+ LN +QR AV S LLV+AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 62 LDPDELLEGLNPQQRAAVVHAGSPLLVVAGAGSGKTRVLTHRIAYLLAARGARPGEILAI 121 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++G MWV TFH R+LR+ F I D+ D Sbjct: 122 TFTNKAAGEMKERVEAIVGGRARAMWVSTFHSACVRILRSEASRLGFGSSFSIYDAADAQ 181 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 RL+ + + ++LD K+ R I++ K+E + + N +E+T +VY AYQ+ Sbjct: 182 RLITLVTRDLDLDPKRHTARGLAAAISALKNELVDWETARDRATNHIERTVAEVYAAYQQ 241 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG- 238 +A +DF +L++ L P + +HYR RF ++LVDE+QDTN+ QY IR L G Sbjct: 242 RLTQANALDFDDLIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYVLIRELVGR 301 Query: 239 ----------------------------------------DTGKVMIVGDDDQSIYGWRG 258 + ++ +VGD DQSIY +RG Sbjct: 302 SASSADEPAAGSGEAVYSGGSAEPDGAGWPAKAVPPSGAVPSAELCVVGDADQSIYAFRG 361 Query: 259 AQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPI 318 A + NI F DFP A I LEQNYRST ILSAANA+I N R K+LW+D DGE I Sbjct: 362 ANIRNIVEFEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDGERI 421 Query: 319 SLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALLQASMPYRIY 377 + A NE DEA FV I D N A+ A+ YR+NAQSRV EE ++ +PYR+ Sbjct: 422 VGFVADNEHDEAAFVAEEIDRLGDENLARPADVAVFYRTNAQSRVFEEIFIRVGLPYRVV 481 Query: 378 GGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTL 437 GG+RF+ER+EI+D L+YLR++ N D R++N P RGIGDR +V + ++ Sbjct: 482 GGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVPRRGIGDRAEAMVSAFAERERIAF 541 Query: 438 WQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE 497 +A + + +A R+A +++ F+ L++ L ++ PL V + ++ +G + E Sbjct: 542 SEALSRVDEVPGVATRSARSIRDFVALLEGLREQLPAGPLAV-IEATLERTGYLSELVAE 600 Query: 498 KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA---DTWQDAV 554 + Q R+ENL ELV ++F+ D L FL AL A Q D V Sbjct: 601 DTIEAQGRVENLRELVGVVQEFTERRPDGTLA---EFLEQVALVADADQIPDDDGSDGVV 657 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+ G+E+G+FP +L + LEEERRLAYVGVTRA +L LT Sbjct: 658 TLMTLHSAKGLEFPVVFLTGLEDGVFPHMRTLGDPTGLEEERRLAYVGVTRARARLYLTR 717 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLR--------------------------- 647 ++ R +G+ Y+ PSRF+GE+P+ VE RL Sbjct: 718 SQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAPAAGGGRFSGGGSAGAGNGSGGSG 777 Query: 648 ---------ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 A SRP + P++E G RV H FG G +V G G+ + Sbjct: 778 GKLPSSPFGAKPSRPAAR-----PIIE----LTPGDRVTHDTFGLGVVVTTSGVGDSRQA 828 Query: 699 QVAFQGQ-GIKWLVAAYARLESV 720 +V F + G K L+ YA +E + Sbjct: 829 KVDFGAETGTKDLLLRYAPVEKL 851 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 314/812 (38%), Positives = 432/812 (53%), Gaps = 104/812 (12%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L++ LN QREAV S LL++AGAGSGKTRVL RIA L+ P I+A+TFTNK Sbjct: 118 LVEGLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTNK 177 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+G+L+G MWV TFH R+LR A L F I DS D LRL+ Sbjct: 178 AAAEMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLITT 237 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRP----HHIQSYGNPVEQTWQKVYQAYQEAC 181 + K + LD K+ PR I+S K++ + P +S NP E+T ++Y Y E Sbjct: 238 IAKDLQLDTKKHAPRALASRISSLKNDLVDPIDFADQAESAKNPFERTLAQIYTNYTERL 297 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT- 240 +A VDF +L+ L P I + YR RF ++LVDE+QDTN QY +R L GD Sbjct: 298 RQANAVDFDDLIGLTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDDP 357 Query: 241 -GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST NIL+AAN++IE Sbjct: 358 HASLTVVGDSDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQNILAAANSVIEE 417 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N GR K LWTD +GE I+LY A +E EAR++ +I D+G + AI YR+NAQ Sbjct: 418 NEGRRKKNLWTDQGEGEQITLYVADDEQAEARYIGRQIDALVDDGRRAGDIAIFYRANAQ 477 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE+ L++ +PYR+ GG RF+ER+EIKDA++YL+++AN D+ R++N P RGIG Sbjct: 478 SRALEDQLIRIGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVPKRGIG 537 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA--DMPL 477 DR V + ++ +A R + +A R+ +A++ F+ +++ L Q A D P Sbjct: 538 DRAEAAVAMLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGPA 597 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE----------EDE- 526 + + +++ SG + + ++R+ENL ELV+ +F EDE Sbjct: 598 EL-LEAILQRSGYYAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEA 656 Query: 527 -----------------------DLMPLQA--------------FLSHAALEAGEGQADT 549 D+ P A FL +L A Q Sbjct: 657 DAPATDTPGTEAPETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPG 716 Query: 550 WQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 +D V LMTLH+AKGLEFP VF+ GME+G FP +L + LEEERRLAYVG+TRA + Sbjct: 717 EEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRLAYVGITRARE 776 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL---------------------- 646 KL LT A+ R L+G+ + SRF+ E+PE ++ R Sbjct: 777 KLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARAGSTLSGAGFGGGYGSGGYGGGS 836 Query: 647 ---------------------RATVSRP-VSHQRMGTPMVENDSGYKLGQRVRHAKFGEG 684 R+ + RP + R TP E +G R+ H FG G Sbjct: 837 YGGQGSGSRRGPSFSGGIGGGRSDIKRPSLGSGRKATP-AEKLPQLVVGDRITHDSFGMG 895 Query: 685 TIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYA 715 T+ + G GE ++++V F+ G K LV YA Sbjct: 896 TVTEVAGQGEKTQIEVQFKAPHGTKRLVLRYA 927 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 491 bits (1263), Expect = e-137, Method: Compositional matrix adjust. Identities = 275/648 (42%), Positives = 392/648 (60%), Gaps = 20/648 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + DSLN +QR AV R +L+LAGAGSGKTRVL HRIA+L+ N +PY IMA+TFTNK Sbjct: 3 IYDSLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ +++G +WV TFH R+LR ++F I D++DQ L++ Sbjct: 63 AAKEMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLIRE 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACDR 183 ++K + +D KQ R + I+S KDEG+ P + + G+ + VY+ YQ Sbjct: 123 VLKFLQIDTKQTKERVFLSAISSAKDEGISPEEFELSALGDYNKMKISNVYKEYQRRLKT 182 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK- 242 +DF +L+++ EL+ + L +YR RF I+VDE+QDTN IQ+ IRLLA + Sbjct: 183 NNALDFDDLIMKTVELFQSNTEALNYYRNRFRYIMVDEYQDTNTIQFKLIRLLAHSLNEY 242 Query: 243 ------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + +VGDDDQSIY +RGA + NI F +FP A I+LEQNYRST NIL+AAN + Sbjct: 243 NEVEHNLCVVGDDDQSIYKFRGANIRNILDFEKEFPDAVVIKLEQNYRSTKNILNAANEV 302 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFN-ELDEARFVVNRIKTWQDNGG-ALAECAILY 354 I NN GR K LWTD DGE +S +C ++ + EA VV+ IKT D G + AILY Sbjct: 303 IHNNLGRKDKSLWTDNEDGEQVS-FCQYDTDFAEATQVVDSIKTLNDQDGISFNNFAILY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSRV EE ++Q S+PY+I G + F++R+EIKD L+YL+ I N D A +R++N P Sbjct: 362 RTNAQSRVFEEKMIQRSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINVP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG TLD V + S ++ + A R L GR+ S + F+ I+ + + + Sbjct: 422 KRGIGLTTLDRVEEFSVKNNMSFYDALRHAENIPGL-GRSTSKITSFVSFIETIKSKLSS 480 Query: 475 MPLHVQ--TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 ++ + +++ +G E+ E + RI N+ EL+ + +Y E + L Sbjct: 481 DTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNINELI--NKIVTYEVEATEPPTLS 538 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EG 589 FL AL A + + V LMTLHSAKGLEFP V++ GME+G+FPS MS++ Sbjct: 539 GFLEEVALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGIFPSYMSINAENPE 598 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 +EEERRL YVG+TRAM+++ L+ A R + G+ ++RPSRFI E+P Sbjct: 599 LEIEEERRLCYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEIP 646 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 32/52 (61%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y +G V+H KFG+G + N+ G + V F QGIK +++++A+LE + Sbjct: 754 AYGVGDTVKHIKFGQGVVTNLTKGGRDYEVTVDFGEQGIKKMLSSFAKLEKI 805 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 490 bits (1261), Expect = e-137, Method: Compositional matrix adjust. Identities = 283/675 (41%), Positives = 382/675 (56%), Gaps = 46/675 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D + L LN++Q EAV S LL++AGAGSGKTRVL HRIA+L++ +P I+A+ Sbjct: 134 VDPASLTAGLNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAI 193 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR RI L+G MW+ TFH R+LR L F I DS D Sbjct: 194 TFTNKAAAEMRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQ 253 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS---YGNPVEQTWQKVYQAY 177 RLL +IK +NLD K++ + I++ K+E + S NP E+T ++Y Y Sbjct: 254 RLLSLIIKELNLDTKKFTAKAVGNRISALKNELVSAEAYASRVASDNPYEKTIAQIYTVY 313 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + A +DF +L+ R L P I +YR +F +ILVDE+QDTN+ QY +R L Sbjct: 314 TQRLRAANSLDFDDLIGRTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYQLVRELV 373 Query: 238 G-------DTG---------KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 G D G ++ +VGD DQSIY +RGA + NI F D+P A TI LEQ Sbjct: 374 GAHVKAPADRGPYPDAVPPAELTVVGDSDQSIYAFRGADIRNITDFEKDYPNAHTILLEQ 433 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ 341 NYRST NILSAANA+IE N R KKLWT G I Y A +E EARF+ I Sbjct: 434 NYRSTQNILSAANAVIERNPDRRPKKLWTASGAGAKIIGYVAESEHAEARFITREIDRLA 493 Query: 342 DNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 D G + AI YR+NAQSR LE+ L++A +PYR+ GG RF+ER+EIKDAL+YLR ++N Sbjct: 494 DEHGVQPGDVAIFYRTNAQSRTLEDMLMRAGLPYRVVGGTRFYERKEIKDALAYLRALSN 553 Query: 401 RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 +DD R++N P RGIG ++ VV + +++ + A R+ L A Sbjct: 554 PDDDVNVRRILNEPKRGIGAKSESVVADYATAHRISFFAAARQAADVPGLGAAAVKKYAE 613 Query: 461 FMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 F+ L+D LAQ P + V++ +G K + ++R+ENL EL+ A +F Sbjct: 614 FVRLMDDLAQIARTEPAATCLEAVLEQTGYLAALRASKDIQDESRVENLSELLDAMVEFE 673 Query: 521 YNEEDEDLMPLQAFLSHAALEA-----------GEGQADTWQDA------------VQLM 557 D L+ FL H AL A EG++ + V LM Sbjct: 674 TENPGAD---LEQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLM 730 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAET 617 TLH+AKGLEFP VF+ GME G+FP Q +L + + EERRLAYVG+TRAM++L LT +ET Sbjct: 731 TLHTAKGLEFPVVFLTGMEHGLFPHQRALTDEKEMSEERRLAYVGLTRAMERLYLTRSET 790 Query: 618 RRLYGKEVYHRPSRF 632 R ++GK ++ PS F Sbjct: 791 RTMWGKSQFNPPSPF 805 Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust. Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 672 LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G VRH KFGEG ++ +EGSG+ + +V F G K L+ YA LE V Sbjct: 937 VGDTVRHTKFGEGRVLAVEGSGDKTVAKVRF-GSEEKRLLLRYAPLEKV 984 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 291/740 (39%), Positives = 418/740 (56%), Gaps = 64/740 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN +QR+AV S LL++AGAGSGKT VL RIA L+ + P+ I+A+TFTNK Sbjct: 6 LVSDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAITFTNK 65 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAH-HMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+ L+G M V TFH R+LR + + L +F I DS+D RLL+ Sbjct: 66 AAKEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLNSNFTIYDSDDSKRLLQ 125 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQK------DEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 ++ K M+LD K++ PR I+ K D+ ++ H + +VY YQ Sbjct: 126 QIAKDMDLDIKKFSPRVLGNKISGWKNELIGVDDAVKEHKVIG----------QVYGFYQ 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E RA +DF +L+ ++ P + +YR RF ++LVDE+QDTN+ QY +I L G Sbjct: 176 ERLRRANALDFDDLIGEVVRIFREHPDVTAYYRRRFRHVLVDEYQDTNHAQYEFISALVG 235 Query: 239 DTGK-VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G + +VGD DQSIY +RGA + NI+ F DFP A TI LEQNYRST NILSAANA+I Sbjct: 236 KDGTGLCVVGDADQSIYAFRGATIRNIREFERDFPNATTILLEQNYRSTQNILSAANAVI 295 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 +N R K LWTD G I Y A E DEARF+ + T D E A++YR+N Sbjct: 296 SHNEHRGKKNLWTDQGAGPKIIGYVADREEDEARFIAS---TIDDRNLPYNEVAVMYRTN 352 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 A SRV+E+ ++ +PYR+ GG RF+ER+E++D ++YLR++ N +D+ + R+VNTP RG Sbjct: 353 AASRVIEDVFIRTGIPYRVVGGTRFYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTPRRG 412 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL---AQETAD 474 IGD+ L V + ++L++A R + + L R +A+ +F+ +++ L QE D Sbjct: 413 IGDKALAFVTAFASRENISLYEAMRHVDEVDYLGARGRNAIAKFVAMMEELRAGTQEVGD 472 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS----YNEEDEDLMP 530 + +++ TD SG R E+ K + + R++NL ELV R F+ N+ED+ Sbjct: 473 L-INLITDV----SGYRDELEKSKDPRDEARLDNLNELVAYARDFAQQARANDEDDS--- 524 Query: 531 LQAFLSHAALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 +QAFL +L A Q D Q V LMTLH+AKGLEFP VF+ G EEG FP SL Sbjct: 525 VQAFLERVSLVADADQIPDAGQGVVTLMTLHTAKGLEFPYVFLPGWEEGQFPHMRSLGNT 584 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR---- 645 +EEERRLAYVG+TRA ++L ++ A R +G + SRF+G++P +E R Sbjct: 585 EEIEEERRLAYVGITRARKQLFISRALLRIAWGNPQTNPESRFLGDIPSSLIEWEREEPA 644 Query: 646 -------------------LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTI 686 R +P S Q + ++ +G V H K+G GT+ Sbjct: 645 YGVGGGYSSYGGNDGWIGGPRRVKKKPASSQSVPASSLK----LAVGDMVNHEKYGVGTV 700 Query: 687 VNMEGSGEHSRLQVAFQGQG 706 + G G+H+ + + F G Sbjct: 701 REVSGIGKHTTVTIDFGSHG 720 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 285/770 (37%), Positives = 413/770 (53%), Gaps = 63/770 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L +LN Q EAV L++ AGAG+GKTRV+ HRIA+L+S+ S S++AVTFTNK Sbjct: 5 LTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLLSLGVVSQ-SVLAVTFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA+EM+ RI L+ +WV TFH LRA +L F I D DQ ++K Sbjct: 64 AASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISLNPYFLIYDFIDQKSVVKD 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI----QSYGNPVEQTWQKVYQAYQEAC 181 +K +N+DEK++ I+ KD P + +S G+ T K+Y+ YQ+ Sbjct: 124 CVKELNIDEKKFKLSIIADKISRAKDNLKFPSDMAAEAESAGDFFGITVAKIYELYQKKL 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +RA +DF +L++R +L++YRE++ I+VDE+QDTN+ QY +I+LLAG Sbjct: 184 ERADAMDFGDLIMRTVSALQRHSELLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYH 243 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V +VGDDDQS+Y WRGA + NI F D+P A++++LEQNYRST ILS AN +++ NN Sbjct: 244 NVCVVGDDDQSVYSWRGADINNILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNN 303 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 R+ K+LWT D +++ A NE DEA + I DN ++ A+ YR+NAQS Sbjct: 304 ARISKRLWTQNPDNGSVTVLKAVNENDEAVKIAELIYSNAYDNKCKFSDYAVFYRTNAQS 363 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + +PY I G +RF++R EIKD ++YL+LI N ND+ +F+RV+N P RGIG Sbjct: 364 RTFEDTFRLSRIPYAIVGTLRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIPRRGIGK 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +++ + ++ + +++WQ+ QE L A AL F + I + + + Sbjct: 424 TSIETLENFAQLKNMSIWQSV-PFAQEAGLTKGPAEALNSFAQFIKDFSTLKNSGSVKLI 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++VI DS E E + + +IEN++EL++A F N + L +L+ AL Sbjct: 483 VEKVITDSEYLKELEAENTPESKIKIENIQELISAVDDFEKNRSLDK--SLAGYLTQIAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 D + V LMTLH AKGLEF VFI G+EEG+FP S LEEERRL Y Sbjct: 541 MNDADSPDESKGKVTLMTLHLAKGLEFDNVFICGLEEGLFPMGESAFNDKELEEERRLMY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE--LPEECVE---------EVRLRAT 649 VG+TRA + L L ++ R++YGK +++ PSRFI E +E E + RL Sbjct: 601 VGMTRARKCLYLCWSTERKVYGKIIWNMPSRFIAEAGFKDESAEMEQNRKQNFQNRLSQG 660 Query: 650 VSRPVSH------------------------------------------QRMGTPMVEND 667 +R + H +R P E+ Sbjct: 661 FNRTIIHSDSFGREQNFRSFNKKSFKAEIVYTNAGSYGYMSSGGEITKAERFDNP-AEDL 719 Query: 668 SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 S YK+G V H FG G I+ G G +L V F+ K L+A A L Sbjct: 720 SPYKIGTAVSHPVFGRGKIIEKSGVGNDLKLVVLFETGQWKKLLARIANL 769 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 313/784 (39%), Positives = 418/784 (53%), Gaps = 74/784 (9%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LND QREAV LLVLAGAGSGKTRV+VHRIA L+ P+ ++AVTFTNK Sbjct: 12 LLQDLNDAQREAVLHDDGPLLVLAGAGSGKTRVIVHRIARLVRDRGVVPWHVLAVTFTNK 71 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ +L+G +WV TFH R LR A L F I D +DQLRL+K Sbjct: 72 AAGEMRERLERLLGPLARELWVQTFHAFGARFLRREAARAGLSPSFAIYDDDDQLRLVKG 131 Query: 126 LIKAMNLDEKQ-WPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDR 183 L+ + LDE + PRQ + I+ K++ LR ++ G +P ++VY Y++A R Sbjct: 132 LLSELGLDEGEGLTPRQVLSQIDRWKNQALRAAEVKVAGLDPETARAKEVYHRYEQALAR 191 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 AG VDF +LLLR L + + RF +LVDEFQDTN +QY ++LL G V Sbjct: 192 AGAVDFGDLLLRPVRLLEEDAALRARWAGRFRYLLVDEFQDTNPVQYRLLQLLTGPRRNV 251 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQ+IY WRGA V NI F DFPG + ++LEQNYRST IL AA+A+I R Sbjct: 252 CVVGDDDQAIYRWRGADVSNILGFDGDFPGTKVVKLEQNYRSTRTILDAAHAVISRARRR 311 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LWT+ G P++L +E EA + + + G + E A+LYR+NAQSR L Sbjct: 312 REKRLWTESGAGAPLALLVGEDEHAEAERIARAVAAERGRGTSGDEIAVLYRTNAQSRPL 371 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E A+ A +PY I G F+ER E++DA +YLRL + D ERVVN P RGIG +T+ Sbjct: 372 EAAMRAARIPYVIVRGTSFYERAEVRDAAAYLRLALSPASDLDLERVVNRPPRGIGGKTV 431 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + +R + R L L +A E L A AL F L+ LA + + V Sbjct: 432 ERLRAHAAARGLPLVEAVAERDAVAELKPAARRALAEFHALVTGLAADVPALDAGVAVQE 491 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY---------NEEDEDLMPLQAF 534 V+K SG+ + E+E ++ R ENL ELV A R+F + E+ PL F Sbjct: 492 VLKRSGMLSRLEEEHTDEAVERAENLAELVAAAREFDESIAGEPPPGDPEEVRPPPLARF 551 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP------SQMSLDE 588 L AL GE A T + V LMTLH+AKGLEF VF+ GME+G P Q S + Sbjct: 552 LEQIAL-LGEADAATPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLPYERPWADQTSSER 610 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK--EVYH--RPSRFIGELPEE----- 639 L+EERRL YVG+TRA ++LT++ A R YG+ Y PSRF+ +LP E Sbjct: 611 DESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYRNMEPSRFLRDLPPELFGDA 670 Query: 640 CVEEVRLR-----ATVSRPVSHQRM-----GTPMVEND---------------------- 667 EVR R A V+RP + +R+ G P +E D Sbjct: 671 VAREVRAREAAQAAPVARPPTIRRLPGALEGEPHIELDGDDLPQPPAPAPRARAAAPRGE 730 Query: 668 ---------------SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 + + G+RV HA GEG ++ + G ++ V F G K ++A Sbjct: 731 PTVDYSFDQRGDAGAAAFSRGERVAHASLGEGVVLACDAGGADAKATVRFASAGDKRVLA 790 Query: 713 AYAR 716 + R Sbjct: 791 RFLR 794 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 298/779 (38%), Positives = 436/779 (55%), Gaps = 70/779 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L+ LNDKQ EAV AP +LVLAG GSGKTRVL HRIA+L+S + SP++I+AVTFT Sbjct: 9 SSILEGLNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLLS-QGVSPFNILAVTFT 67 Query: 64 NKAAAEMRHRIGQLMGTSQGG-----MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 NKAA EMR RI +L+G + G + +GTFH + R+LR + +F I D +D Sbjct: 68 NKAAREMRERIERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGISPNFVIYDDDD 127 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQA 176 Q+RL+K+ + + LDEKQ+ PR I+S K L P S G + ++ +VY+ Sbjct: 128 QIRLIKQALNEIGLDEKQYAPRSIQARISSAKSALLDPEDYSSQGVSSYFDEIAARVYRR 187 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ+ + VDF +LL++ LW + P ILQ YR+R+ +LVDE+QDTN QY I LL Sbjct: 188 YQQLLEINQAVDFDDLLMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQYMLINLL 247 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD+DQ IY WR A + NI F D+P A+ I LEQNYRS IL A+ + Sbjct: 248 TQEHRNIFVVGDEDQGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHI 307 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYR 355 I +N R KKLWT+ + G + + A++E DEA ++ I G ++ A++YR Sbjct: 308 ISSNRLRRPKKLWTNKSGGALVRVREAYDEQDEASYIAREISRLTSLGEYTYSDFAVMYR 367 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV-NTP 414 +N+QSR +EEA + +PY+I GG RF+ER+E+KD L+YLRLI N +D A+ R++ NTP Sbjct: 368 TNSQSRPVEEAFSRYRIPYQIIGGTRFYERREVKDVLAYLRLIHNPHDAASLRRIIENTP 427 Query: 415 T-RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALA---------------GRAASAL 458 + RGIG T+ + + ++LW A L K+L +A +L Sbjct: 428 SGRGIGKGTMKTLEDLASRAHISLWDAIEIALGIKSLEEVGAFLPNLEIPKLQSKAKESL 487 Query: 459 QRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 ++ + LI L ++ + L D ++ SG + + E+ R+EN +L++ + Sbjct: 488 KQLVGLIYELREQRDILTLPHLIDTLLIKSGYAS-FLSSGAEEDLERLENARDLISIAQD 546 Query: 519 FSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ---DAVQLMTLHSAKGLEFPQVFIVGM 575 ++ + E L+ FL AL++ DT Q + V L+TLH+AKGLE+ VFI+G Sbjct: 547 YAAIDTSEALV---EFLQEVALQS---DVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGF 600 Query: 576 EEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 EEG+ P S+D +EEE RLAYVGVTRAM+KL ++YA R ++G + PSRF+ Sbjct: 601 EEGLLPHARSMDRESDIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVPSRFLAN 660 Query: 636 LPEECVEEV----------RLRATVSRPVSHQRMGTPMVENDSG---------------- 669 +P + ++ RL +T S N SG Sbjct: 661 IPPDLLDGSLPSLGRRGPGRLTSTTSPRTPSGSTYPGGARNYSGQSYRPFPSNSNFVSSS 720 Query: 670 --------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 YK G RVRH KFGEG ++ +E GE + ++V F K L+A+ ARL+ + Sbjct: 721 NLERIIQEYKPGDRVRHPKFGEGVVLKVEIQGEDAEVEVRFAAGSTKKLLASMARLQKI 779 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 298/752 (39%), Positives = 423/752 (56%), Gaps = 44/752 (5%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L SLND Q++ LLVLAGAGSGKT+++ HR+A+L+ +N P +I+AVTFT Sbjct: 11 SEILKSLNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVDPQNILAVTFT 70 Query: 64 NKAAAEMRHRIGQLM---GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 NKAA EM+ R L+ G S G+W+ TFH +L+ H ++F I + DQ Sbjct: 71 NKAANEMKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGENFLIYTASDQK 130 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--EQTWQKVYQAYQ 178 +KR IK + K++P + +I+ K + + P + Y + Q Q+VY+AYQ Sbjct: 131 AAVKRAIKECEISPKEYPVKMFTSFISKCKSQKIVPDEVFDYFDDSFKTQISQQVYEAYQ 190 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LLL L+ P IL+ Y ERF I+VDE+QDT+++Q+ I LA Sbjct: 191 NVLKANNAMDFDDLLLNTVILFSKYPDILKIYAERFKYIMVDEYQDTSSLQFELINKLAH 250 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA +ENI F + G + I+LE+NYRST NIL AA+A+I Sbjct: 251 VHKNICVVGDDDQCIYEWRGATIENILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVIS 310 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSN 357 NN+ R KKLWT +GE IS+ N EA F+V++I+ + G + AILYR+N Sbjct: 311 NNSKRKEKKLWTGSVEGEKISIEVYENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYRNN 370 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +QSR+ EEAL + +PYRI G+RF+ER EI D L+YLR+ N DD AF R +N P RG Sbjct: 371 SQSRLFEEALKRWDVPYRILSGIRFYERSEIVDMLAYLRVTENPFDDIAFLRCINEPARG 430 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 +G + L+ V +R+R ++L+ LL ++ LA +A+A + E I + + DM L Sbjct: 431 LGKKALEKVASFARERGISLFAG---LLMDECLAELSAAARRGAEEFI-KMIKHAQDMLL 486 Query: 478 HVQT------DRVIKDSGLRTMYEQEKGEKGQTRIENLEELV--TATRQFSYNEEDEDLM 529 T +I+ SG + + ++EN+ ELV A R+ S +DE L Sbjct: 487 DENTRISNVLKYIIETSGYERKLKLADTLESDAKLENIYELVASVADREGSSAGDDEKLT 546 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L AFL AL + D DAV LMTLHS+KGLEF VFI GMEEG+FPS D Sbjct: 547 -LSAFLEEIALISDVDNHDETADAVVLMTLHSSKGLEFNVVFIPGMEEGIFPSGQGDDNP 605 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 G++EEERRL YVG TRA ++L L+ A+ RR Y +++Y +PSRF+ E+PEE V+ + A+ Sbjct: 606 GKIEEERRLCYVGFTRAKEELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEAS 665 Query: 650 VS-------------------RPVS--HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVN 688 +PV+ ++M T ++ + G V H KFG G I+ Sbjct: 666 SRDRYTDGYAGDPIASPFKKIKPVNTVKEKMLTAKPVSEKEFSDGDTVEHDKFGRGLII- 724 Query: 689 MEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +AF GIK L A + V Sbjct: 725 ---AQTEKVWVIAFDDGGIKKLAKGIADIRKV 753 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 281/662 (42%), Positives = 385/662 (58%), Gaps = 28/662 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L++ LN +Q AV + LL++AGAGSGKTRVL HRIAWL++ P+ I+A+TFTNK Sbjct: 66 LVEGLNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAITFTNK 125 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+ L+G + MW+ TFH A RLLR + L F I DS D LRL+ Sbjct: 126 AAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLRLVTT 185 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY---GNPVEQTWQKVYQAYQEACD 182 + K LD K++ P+ + I+S K+E + + G+P + VY+ Y Sbjct: 186 VAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYTARLR 245 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT-- 240 +A +DF +L+ ++ P +L +YR RF ++LVDE+QDTN+ QY IRLLAG Sbjct: 246 QANALDFDDLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAGPAGD 305 Query: 241 --------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 G++ +VGD DQSIY +RGA + NI F DF A TI+LEQNYRST IL A Sbjct: 306 PEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQTILDA 365 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECA 351 ANA+IE N R K+LWT +G I Y A NE EA ++ I QD G ++ A Sbjct: 366 ANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIAATIDRLQDEDGIRPSDVA 425 Query: 352 ILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV 411 + YR+NAQSR LEE L+ +PYR+ GG RF++R+EIKDAL+YLR+I N +DD R++ Sbjct: 426 VFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNVRRIL 485 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 N P RGIGDR V ++ + T A R+ LA R+ A+ F++++D LAQ Sbjct: 486 NEPKRGIGDRAEGAVAAWAQRNRSTFSAALRDAEHAPGLAARSLKAVNGFVQMMDDLAQV 545 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + V++ SG+ + + + ++R +NL ELV R F D L Sbjct: 546 AETAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFEKTTPDGT---L 602 Query: 532 QAFLSHAALEAGEGQADTWQDA-----------VQLMTLHSAKGLEFPQVFIVGMEEGMF 580 FL AL A Q T D V LMTLH+AKGLEFP VF+ GME G+F Sbjct: 603 SDFLEQVALVADADQLPTAPDVEGEALAEAQGQVTLMTLHTAKGLEFPVVFLTGMEHGVF 662 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 P S+ + L EERRLAYVG+TRA ++L LT AE R L+G+ ++ PS+F+GE+PE Sbjct: 663 PHARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEIPEAL 722 Query: 641 VE 642 ++ Sbjct: 723 ID 724 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 486 bits (1251), Expect = e-135, Method: Compositional matrix adjust. Identities = 287/699 (41%), Positives = 398/699 (56%), Gaps = 51/699 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWL------------------- 46 LL LN++QREAV + LL+LAGAGSGKTRV+ HRIA L Sbjct: 5 LLSGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPPGLTA 64 Query: 47 -------MSVEN----------------CSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG 83 ++VE P+ I+A+TFTNKAAAEMR R+ QL+G Sbjct: 65 DDLEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVGPRAR 124 Query: 84 GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAM 143 +W TFH R+LR ++F ILD+EDQ +++ +K + L E+Q+ P + Sbjct: 125 EVWAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQPGAVL 184 Query: 144 WYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN 202 I++ K+ L P G+ Q KVY YQE +DF +LLL+A EL Sbjct: 185 GTISNAKNAMLDPRRFADRAGDYWRQQVAKVYALYQEQLRSGNALDFDDLLLKAVELLER 244 Query: 203 KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVE 262 + ++Y+ +F ILVDE+QDTN++Q W+ LLAG+ + +VGDDDQ IY WRGA + Sbjct: 245 FDDVREYYQRKFEYILVDEYQDTNHVQNRWVFLLAGEKQNLAVVGDDDQGIYSWRGADIS 304 Query: 263 NIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYC 322 NI F FPG TI+LEQNYRST NILSAA A++ +N GR K+LWT G+P+ + Sbjct: 305 NILEFEAQFPGCRTIKLEQNYRSTQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPVYHFT 364 Query: 323 AFNELDEARFVVNRIKTWQDNGGA------LAECAILYRSNAQSRVLEEALLQASMPYRI 376 A +E DEA FV ++ G + A+LYR++AQSR LEEA+++ S+PY I Sbjct: 365 AADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVLYRTHAQSRALEEAMVRRSIPYGI 424 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 YGG+RFFER+EIKD L+YLR+IAN D +F R V P RGIG T+D + + Q+ Sbjct: 425 YGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVPKRGIGPATVDKLVDYAEQWQVP 484 Query: 437 LWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQ 496 + A + L+G ++ F LI+ L +A + D V++ +G+ Sbjct: 485 VALAALDCSMVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLERTGILEELRA 544 Query: 497 EKGEKGQTRIENLEELVTATRQF--SYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAV 554 + + R+EN++EL + +F EE + L L +FL+ AL Q Q+ V Sbjct: 545 DTSLEAAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEGQNKV 604 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+VG+EEG+FP +L + ++EEERRL YVG+TRA +L LT Sbjct: 605 TLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALTDEVQMEEERRLCYVGMTRARLRLYLTN 664 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 A +R L+G+ Y+ PSRF+ E+P E VEEV A S P Sbjct: 665 AVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGP 703 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 486 bits (1250), Expect = e-135, Method: Compositional matrix adjust. Identities = 280/720 (38%), Positives = 421/720 (58%), Gaps = 22/720 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN +Q EAV + LLVLAGAGSGKTRV+ +RIA+++++ P +I+A+TFTNKA Sbjct: 4 LKELNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI +L+ S MWV TFH ++LR + +F I D +D+ +LLK Sbjct: 64 ADEMKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLLKE 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 +N+DE++ + I++ K+ + P + GN V+ +VY+ Y + Sbjct: 124 CFTKLNIDEEKLELKFVSRLISNFKNMLVGPSDVYKEGN-VDPRVVEVYRLYNKLLKEYN 182 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL L+ P IL+ Y+ +F ILVDE+QDTN+ Q+ I LL+ + + Sbjct: 183 AFDFDDLLYYTIMLFKTNPDILEKYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNICV 242 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY +RGA V NI F N FP A+ I+LE+NYRST ILSAAN +I+NN R Sbjct: 243 VGDDDQSIYSFRGADVRNILEFENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNRKP 302 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+LWTD +GE I LY AF+E+DEA FV IK G +E ILYR+NAQS E Sbjct: 303 KRLWTDNNEGEKIYLYPAFDEVDEANFVSMSIKNLIQGGIKPSEIGILYRTNAQSLNFEN 362 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 AL S+PY++ G +RF+ER+EIKD ++YLRLI N +D+ + RV+N P RGIG T++ Sbjct: 363 ALSSHSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVPKRGIGPSTVEK 422 Query: 426 VRQTSRDRQLTLWQACRELLQEKA---LAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ S + ++ ++ LL+E+ R + L F+ L++++ E + + Sbjct: 423 IKVLSDEYGISAYR----LLKERGDFEFDRRTYAKLYDFILLLESMRTEAESKSVVEVIE 478 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL-- 540 V+ + K E+ R +N+E+L++A F EE+ED LQ FL+ L Sbjct: 479 LVLDKTKYMESLLSSKNEEDFQRAKNIEQLISAAAMFE--EENED-KSLQNFLNSITLSF 535 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP---SQMSLDEGGRLEEERR 597 E +GQ +D V LMT+H+AKGLEF VF+ G+EEG+FP S+ ++ LEEERR Sbjct: 536 EEDDGQK---EDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLLRSEGEIELQNELEEERR 592 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YV +TRA + L LTYA RR++G+ + S FI E+P + ++++ ++++ Q Sbjct: 593 LCYVAITRAKRFLVLTYANNRRVFGRFSSRQKSSFIDEIPIKYIQQIYTPLSITKSSGAQ 652 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + +G ++H KFG G ++++ S + + + + F+ G K L+ +YA L Sbjct: 653 SISNTEDGIKKALAVGDIIQHKKFGIGKVLSV--SEDMNEVLIDFEKFGQKRLLLSYANL 710 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 285/750 (38%), Positives = 435/750 (58%), Gaps = 38/750 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL SLN +Q EAV +L+LAGAGSGKT+ L RIA+L+ + PYSI+A+TFTNK Sbjct: 4 LLSSLNTQQAEAVKHVAGPILILAGAGSGKTKALTTRIAYLLE-KGVPPYSILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR---AHHMDANLPQDFQILDSEDQLRL 122 AA EMR R+ +L+G +W+ TFHG ++LLR H F I D+ D + Sbjct: 63 AAKEMRERVDKLVGPLAKDVWLYTFHGFCNQLLRREIKHLSHYGYGTGFSIYDTTDCKNV 122 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEAC 181 LK ++K + +DEK +P M I++ K+ L + + ++Y Y++ Sbjct: 123 LKGILKDLKMDEKFYPLSAVMSVISNAKNAQLSSAAFARKADDFHAKKVAEIYLEYEKRM 182 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 + VDF +LLL + +L + + + Y+ +F +++DE+QDTN++QY +L++ Sbjct: 183 RQNNAVDFDDLLLLSVDLLQHDRDVREKYQHKFQYVMIDEYQDTNHVQYLLAKLISAPEN 242 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGD DQSIYGWRGA + NI F D+P A+ +LEQNYRST IL AANA+IE+N+ Sbjct: 243 NLCAVGDIDQSIYGWRGADISNILDFEKDYPDAKIYKLEQNYRSTQVILDAANAVIEHNS 302 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQS 360 R K LWT+ +G+PI+ + AFN+ +EA F V+ ++ +D L + A+LYR+NAQS Sbjct: 303 ARRPKNLWTENGNGKPITYFQAFNDRNEAEFTVHNMRRLRDEAHFHLGDMAVLYRTNAQS 362 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EE L++ +PY + G ++F++R+E+KD L+YLRL+ N D+ A ERV+N P RGIG Sbjct: 363 RMFEETLIKNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEPKRGIGS 422 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T++ ++ + L+L +A + L GR+ + F L+++L +ET +P+ Sbjct: 423 ATVEKLKMLLNETGLSLHEALKA-PSAGELLGRSLLKVTAFSTLLESLRKETDTVPVEQL 481 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +++ +G E E+ + R++NL+EL +E+E+ L+ FL+H AL Sbjct: 482 MTDILEKTGYWDALLLEGSEQARGRMDNLDEL-KRIAMEFQEDENEEEKTLEDFLNHVAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + A +DAV LMTLHSAKGLEFP VF+ GMEEG+FPSQ SLD+ +LEEERRL Y Sbjct: 541 VSDIDDAKLSRDAVTLMTLHSAKGLEFPVVFMAGMEEGLFPSQRSLDDTDKLEEERRLCY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL-------------- 646 VG+TRA +KL LT +R +YG+ V PSRF+ E+P +E + Sbjct: 601 VGITRAKKKLFLTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETALVGQQDGSGAQRAAWE 660 Query: 647 -----RATVSRPVSHQRMGTPMVEND-----------SGYKLGQRVRHAKFGEGTIVNME 690 + R ++ +R + + D +K G +VRH +G GT+++ + Sbjct: 661 NRPQEEGSGLRSIARRRGASILDRRDRRSEYVPDGKLEVFKAGDKVRHKAWGVGTVISAQ 720 Query: 691 GSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + ++VAF G GIK L Y ++ V Sbjct: 721 PDADGQIVKVAFPGTGIKALSTKYKVIQKV 750 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 484 bits (1247), Expect = e-135, Method: Compositional matrix adjust. Identities = 276/741 (37%), Positives = 436/741 (58%), Gaps = 33/741 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +SYL D+LN++QR+AV +L++AGAGSGKT+ L RIA+++ + P +I+A+TF Sbjct: 11 MSYL-DTLNERQRQAVEQIEGPVLIMAGAGSGKTKALTCRIAYMLE-QGIRPQNILAITF 68 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLP--QDFQILDSEDQL 120 TNKAA EMR R+ L+G +W+ TFH R LR ++ + P F I DS+D Sbjct: 69 TNKAAQEMRERVHHLVGAEADKLWMYTFHSFGARFLR-REINNHPPFTDKFTIYDSDDSK 127 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKD--EGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 +++K ++K +NLD+KQ+PPR I++ K+ +G ++ GN + VY Y Sbjct: 128 QMIKNILKELNLDDKQYPPRNIQARISAAKNALQGPESFRAEASGNFYNEKIADVYDLYD 187 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + +DF +LL +L L I + +++ F IL+DE+QDTN+ QY + +AG Sbjct: 188 KYMKQNNALDFDDLLFATTKL-LADETIRRRWQDHFHYILIDEYQDTNHAQYLMAKYIAG 246 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + VGD DQSIY WRGA + NI F D+P A+ I+LEQNYRST IL+AANA+I+ Sbjct: 247 KSQNICAVGDADQSIYSWRGADLRNIMDFREDYPSAQIIKLEQNYRSTQTILNAANAVIK 306 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV-NRIKTWQDNGGALAECAILYRSN 357 NN RL K+LWT+ G + Y A +E +EA F+V + +K +N + A+LYR N Sbjct: 307 NNVERLEKRLWTENNPGVHLQKYAASDEHNEADFIVESMMKEHGENHVPYGKMAVLYRMN 366 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV+EE++++ + Y + GG RF++R EI+D L+YL+L+AN DD + R++N P RG Sbjct: 367 AQSRVIEESMVKRGIAYTMVGGTRFYDRAEIRDMLAYLKLVANFRDDISLMRIINVPRRG 426 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ + + S+ +++++ L+E + A + LQ+F LI + + + + Sbjct: 427 IGQTTMQKLSEFSKQGNMSMFEGIMS-LEESDIPVPARTKLQKFSALIFSFLNASTEGDV 485 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ D+ ++ +Q + Q+R ENL EL+ + F+ E+ E +P FL Sbjct: 486 FTLIQKIMTDTEYLSVLQQSSDPQAQSREENLGELLNVAKDFT-QEQPEGGLP--EFLEK 542 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + D V LMT+HSAKGLEFP V++ GM+EG+FP SL + LEEERR Sbjct: 543 VALVNDVDSFEEQDDKVTLMTIHSAKGLEFPIVYMAGMDEGIFPGVRSLMDETALEEERR 602 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------LRATVS 651 L YV +TRA +KL LT + R +YG+ + SRF+ E+P + ++E+R R T+ Sbjct: 603 LCYVAITRAKEKLYLTTSAVRTMYGQVKPYVESRFLKEIPVDLLDEIRGNSSEAKRRTLI 662 Query: 652 RPVSHQR----------MGTPM----VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 R + Q+ M P+ V+ +++G +V H +G+G + + GSG+H Sbjct: 663 RSNNEQKSKWALSSAGIMNKPVAKKSVKARFDWQVGDKVSHRMWGKGQVAEVTGSGKHMM 722 Query: 698 LQVAFQGQGIKWLVAAYARLE 718 L++ F I+ ++ A+A +E Sbjct: 723 LKLIFPNDQIRQVMVAFAPIE 743 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 484 bits (1245), Expect = e-135, Method: Compositional matrix adjust. Identities = 281/684 (41%), Positives = 392/684 (57%), Gaps = 48/684 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN +QREAV S LL++AGAGSGKT VL RIA+L++ +P I+A+TFTNK Sbjct: 31 LLEGLNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITFTNK 90 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH-MDANLPQDFQILDSEDQLRLLK 124 AAAEMR R+ L+G MWV TFH R+LRA + L +F I DS+D RLL Sbjct: 91 AAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRRLLT 150 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVE--QTWQKVYQAYQEA 180 + K + LD K++ R +I++ K+E + P + + +P E + KVY YQ+ Sbjct: 151 MISKDLELDTKRFSARLLATHISNLKNELVGPEEAVVAADQDPAELPRLIAKVYGHYQQR 210 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +L+ L P I ++YR RF ++LVDE+QDTN+ QY +R L G Sbjct: 211 LRAANALDFDDLIGETVALLQAFPQIAEYYRRRFRHVLVDEYQDTNHAQYMLVRELVGGA 270 Query: 241 GK---------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 G+ + +VGD DQSIY +RGA + NI+ F D+P A TI LEQNYRST NILS Sbjct: 271 GESDHAVAPAELCVVGDADQSIYAFRGATIRNIEEFERDYPDARTILLEQNYRSTQNILS 330 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAEC 350 AAN++I N GR K+LWTD +GE I Y A NE DEA FV + I D G A+ Sbjct: 331 AANSVISKNTGRREKRLWTDSGEGELIVGYVADNEHDEASFVASEIDRLVDQGETKFADI 390 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 A+ YR+N SR LEE ++ +PY++ GG+RF+ER+E++D ++YLR++AN +D + R+ Sbjct: 391 AVFYRTNNSSRALEEIFIRLGVPYKVVGGVRFYERKEVRDIVAYLRVLANEDDTVSLRRI 450 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDAL 468 +NTP RGIGDR V S R ++ A R+ + K L R+ A+ F+E++D L Sbjct: 451 LNTPRRGIGDRAEACVAVHSEHRNISFAAALRDGAEGKVALLNTRSQKAIASFLEMMDGL 510 Query: 469 ------AQETADMPLHVQ-----TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 D P + + V++ +G R + R++NL ELV+ R Sbjct: 511 RALLPTPAADEDEPFELGDIGEVAEAVLERTGYRAELAASSDPQDGARLDNLNELVSVAR 570 Query: 518 QFSYN-------------------EEDEDLMPLQAFLSHAALEAGEGQ-ADTWQDAVQLM 557 +FS + E + D L AFL +L A Q D+ V +M Sbjct: 571 EFSSDARNAAGLIDPDDEETAAMREGEPDPGSLAAFLERVSLVADADQLPDSDDGVVTMM 630 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAET 617 TLH+AKGLEFP VF+ G E+G FP +L + L EERRLAYVG+TRA Q+L LT A Sbjct: 631 TLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARQRLYLTRAIM 690 Query: 618 RRLYGKEVYHRPSRFIGELPEECV 641 R +G+ + + SRFI E+PE+ + Sbjct: 691 RSAWGQPIQNPASRFIQEIPEDLI 714 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust. Identities = 274/695 (39%), Positives = 377/695 (54%), Gaps = 52/695 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ + LN Q +AV P LLV+AGAGSGKTRVL RIAWL++ P+ I+A+TF Sbjct: 51 ITAITKGLNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITF 110 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ L+G + MWV TFH R+LRA + + F I D+ D L Sbjct: 111 TNKAAGEMRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKAL 170 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQEA 180 L R+IK LD K++ P+ I++ K+E + P P + Q ++Y YQ+ Sbjct: 171 LTRIIKGRGLDPKRFTPKSFAARISNAKNELVEPATFAEMAAPDKISQLTAEIYAEYQQL 230 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 RA DF +L+ LW P IL YR++F +LVDE+QDTN QY +RLLA D Sbjct: 231 LRRANAFDFDDLIAEVVYLWRRHPEILAKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDP 290 Query: 241 ---------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 + +VGD DQSIY +RGA + NI+ F DFPGA T+ LEQNYRS Sbjct: 291 LGDPRLDGALGAHPGAGLTVVGDSDQSIYAFRGATIRNIEEFEQDFPGATTVYLEQNYRS 350 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T ILS ANA+I N+GR K LWT+ DG ++ A E DEA F++ I+ G Sbjct: 351 TGTILSVANAIISENSGRHKKNLWTEAGDGPKAIMFAADTERDEAAFIIREIRDAHTAGT 410 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+ YR+N+QSR LEE L + ++PYR+ GG +F++R+EIKDA++YL AN DD Sbjct: 411 PWDEFAVFYRTNSQSRALEEMLTRENVPYRVVGGTKFYDRKEIKDAIAYLTAAANPADDG 470 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELL----QEKALAGRAASALQRF 461 R++N P RG+GD +R+ +R + QA R + E L+ +A +AL Sbjct: 471 NLLRILNEPKRGLGDVAQTKIREAARLSGTSFGQAMRGFITGGVHEGQLSAKATTALASL 530 Query: 462 MELIDAL-AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 + L+D L + A PL ++DSG + RIENL EL +FS Sbjct: 531 VNLLDNLRGLDEAGAPLDEILGTALEDSGYLPKLRASNNPQDDARIENLLELHAVAEEFS 590 Query: 521 YNEEDE---------------DLMPLQAFLSHAALEAGEGQADT---------------W 550 +E D D +P Q AA E + +T Sbjct: 591 LSEPDSRLADFLERISLVADTDQLPDQGSKEVAAKEMAPREPETNVSEASGDHPNPAPET 650 Query: 551 QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKL 610 + V LMT+H+AKGLEF VF+ GME+G+FP SLD+ +EEERRLAYV VTRA ++L Sbjct: 651 KPEVTLMTVHTAKGLEFNTVFVTGMEDGLFPHSRSLDDPEAIEEERRLAYVAVTRARRQL 710 Query: 611 TLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 LT A R ++G + SRF+ ++P + V+ R Sbjct: 711 YLTRAAARTVFGDTMNMPASRFLNDIPAQYVDNRR 745 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust. Identities = 287/776 (36%), Positives = 438/776 (56%), Gaps = 74/776 (9%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LND QR V ++V+AGAGSGKTRVL +RIA+LM+ + ++I+++TFTNKA Sbjct: 19 LAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMN-QGVDAFNILSLTFTNKA 77 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI +++G+S+ +W+GTFH + ++LR P +F I D++D +++ Sbjct: 78 AREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSHSVIRA 137 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQ---------KVYQ 175 +IK M LD+ + +Q I+S K+ + +++Y NP Q ++Y+ Sbjct: 138 IIKEMRLDKDVYKYKQVYNRISSYKNSLI---TVKAYFQNPELQEADAMSKKPRLGEIYK 194 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 AY + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY +R Sbjct: 195 AYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQSRFKYILVDEYQDTNHSQYLIVRA 254 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L+ + +VGDD QSIY +RGA + NI F D+ + RLEQNYRS+ NI+ AAN+ Sbjct: 255 LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAANS 314 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV-----NRIKTWQDNGGALAEC 350 +I+ N +L K +WT DG I + + +E R+V N+++ DNG + Sbjct: 315 IIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQMDNG----DF 370 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+NAQSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N D+ A +RV Sbjct: 371 AILYRTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEALKRV 430 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA-SALQRFMELIDALA 469 +N P+RGIG T+D + + ++++++ + + + + R + L F+ +I + A Sbjct: 431 INYPSRGIGQTTMDRLAIAANQHKISMFEVIKNIDKLELKINRGTQTKLVNFVNMIRSFA 490 Query: 470 --QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED-- 525 ET+D +T V K +GL +++ +G RIEN+EEL+ R F +++ Sbjct: 491 IMNETSDAFQIAET--VTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDFVEGQKELA 548 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 + L FL AL D V LMT+H AKGLEFP V+IVGMEE +FPS MS Sbjct: 549 DATGSLSEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMS 608 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE------- 638 ++ LEEERRL YV +TRA ++ LTY +R +GK V PSRFI E+ + Sbjct: 609 MNTRSELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMV 668 Query: 639 -----------------ECVEEVRLRATVSR----PVSHQ---------RMGTPMVENDS 668 + V++ +LR T + P +H+ R P S Sbjct: 669 PQDDYKYKPLIDTDIFGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKLKPAATEPS 728 Query: 669 GYK------LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 + G V H +FG GT++ +EG G+ + ++ F GIK L+ +A+L+ Sbjct: 729 KARNTLDLAEGNEVEHMRFGRGTVMKLEGVGQDRKAEIEFDQGGIKKLLLRFAKLK 784 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 279/691 (40%), Positives = 393/691 (56%), Gaps = 44/691 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN +Q +AV LL+ AGAGSGKTRVL RIAW++S + P I+A+ Sbjct: 135 VDAQKLLDGLNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRIAWILSQKGAWPSQILAI 194 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ +L+G+ MWV TFH ++LR L F I D+ D Sbjct: 195 TFTNKAAAEMRERLSKLIGSEANTMWVSTFHSACVKILRRSGQYIGLKSGFSIYDTSDCE 254 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDE-----------------GLRPHHIQSYG 163 RL+K + +N+D K++ PR + I+ K+ G+ I G Sbjct: 255 RLVKIIATELNVDIKRFTPRSILGKISDCKNSLITWREQLDMYANDYKPGVAGQQIAHAG 314 Query: 164 NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQ 223 N E + +Y YQ +A VDF +L++R +L P Q+YR +F ILVDE+Q Sbjct: 315 NS-EAVYATIYAEYQHRLSQANAVDFDDLIMRTVQLMREVPEAAQYYRHKFRYILVDEYQ 373 Query: 224 DTNNIQYAWIRLLAG---------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFL 268 DTN+ QY IR LAG + +VGD DQSIY +RGA + NIQ F Sbjct: 374 DTNHAQYELIRELAGVDVKQNSANPSQQNNTPASITVVGDSDQSIYAFRGADIRNIQDFE 433 Query: 269 NDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELD 328 DFP A TI LEQNYRST IL AANA+I +N GR KKLWT G PI+ Y A + Sbjct: 434 KDFPNATTIMLEQNYRSTQTILDAANAVISHNQGRKPKKLWTALGKGTPITGYAADSAQQ 493 Query: 329 EARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQE 387 EA +V I + + G A ++ AI+YR+NAQSR LE+AL++A +PY++ GG +F+ER+E Sbjct: 494 EAAWVAQEIARLAGEEGVAYSDMAIMYRANAQSRSLEDALVKAGLPYQLVGGTKFYERRE 553 Query: 388 IKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQE 447 +KDAL+YL+ +AN +DD R++N P RG+G R ++ ++ + ++ WQA L Sbjct: 554 VKDALAYLQSMANPDDDVNMRRILNVPKRGLGARAEALLTLYAQTQGVSFWQALEHLESI 613 Query: 448 KALAGRAASALQRFMELIDAL---AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT 504 + + R A+ L+ F EL+ L Q P V D ++ DSGL ++ + + Sbjct: 614 EGMPTRTATKLKEFRELMHNLITCMQNDDSKPSKV-IDSILNDSGLLEDLQRSEDPQDAA 672 Query: 505 RIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ-ADTWQDA--VQLMTLHS 561 R++NL +L + ++ N D + FL AL A Q D +D V LMTLH+ Sbjct: 673 RVDNLSQLQSVAAEYEQNTPDASVA---GFLETTALVADSDQLPDENEDTGKVTLMTLHT 729 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 AKGLE+P VF+ GME+G FP +L++ G L EERRLAYVG+TRA Q+L +T A R + Sbjct: 730 AKGLEYPVVFLTGMEQGTFPHSRALEDDGELCEERRLAYVGITRAKQRLYVTRAAVRAQW 789 Query: 622 GKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 G+ PS+F+ E+P+ ++ R + V R Sbjct: 790 GQAQDMLPSQFLDEIPDNLIDWKRRESDVER 820 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 480 bits (1235), Expect = e-133, Method: Compositional matrix adjust. Identities = 301/779 (38%), Positives = 437/779 (56%), Gaps = 76/779 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LL+ LN QREAV LLVL+GAGSGKTRV+ R+A+L+ V N P+ I+AVTFT Sbjct: 9 SALLEDLNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTFT 68 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ QL+G + V TFH A ++LR L + F I D DQL ++ Sbjct: 69 NKAAREMRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLTRSFVIYDDSDQLNVV 128 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACD 182 KR ++ ++ Q PR+ + I+ +K+ P H+Q + G+ Q +KVY AYQE Sbjct: 129 KRAMREAGIESMQ--PREILHRIDQEKNAARLPEHMQVAPGDERGQLVRKVYAAYQERLR 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD-TG 241 A VDF +LLL L+ +P +L++YR RF ++LVDEFQDTN +QYA ++ LA + Sbjct: 187 AANAVDFGDLLLLLVTLFRTRPDVLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPPPSA 246 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 +++VGDDDQSIY WRGA V+NI F +PGA+ ++LEQNYRS NIL AA+ +I N Sbjct: 247 NLVVVGDDDQSIYRWRGADVDNILGFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNT 306 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQS 360 R+ KKLW++ G+ ++L +E E + V +I Q G L+ A+ YR+NAQS Sbjct: 307 RRMEKKLWSERQRGQTLNLMLNRDERAEGQEVARQILALQREGFIKLSSMAVFYRANAQS 366 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEAL A +PY + G F++R E++DA +YLRL+ N DA R++N P RGIGD Sbjct: 367 RVLEEALRLARVPYTLVSGRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPARGIGD 426 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL---AQETADMPL 477 T++ V + R ++L++ + Q AL G A L+ F L+++L AQ + Sbjct: 427 TTVERVTDFANARGVSLYEVLSQPEQIPALNGAAVKRLKGFRNLLESLTAFAQTNEEAAG 486 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE----------- 526 V D++++++ L + E ++ QTR ENL E + A ++F N Sbjct: 487 AV--DQMLRETKLVETLQAEGSDESQTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSD 544 Query: 527 ------------DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVG 574 D+ LQAFL +L GE A+ V LMTLH+AKGLEF VF+ G Sbjct: 545 VPPEVDAAPLTADVPALQAFLEQISL-VGEADAEVGDGRVALMTLHAAKGLEFDAVFLTG 603 Query: 575 MEEGMFPSQMSL---------------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRR 619 MEE +FP ++ + + EERRL YVG TRA ++L ++ A+ R Sbjct: 604 MEENVFPHSRAVKSESTFLNEVASADGEPSEEMAEERRLCYVGFTRARKRLFVSLAQCRS 663 Query: 620 LYGKEVYHRPSRFIGELPEECV----EEVRLRATVSRPV--SHQRMGT------PMVEND 667 L+G+ Y+ PSRF+ ++P +EV RP+ S QR T P ++ Sbjct: 664 LFGELRYNAPSRFLRDVPPALFGISEQEV---PEAPRPMVPSTQRRRTWDEDDGPRIDRS 720 Query: 668 -----------SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAY 714 G G RVRH +FG G +V+ +G+G ++++ V F G G+K ++A + Sbjct: 721 YSQASSDMDGVGGDVRGMRVRHEQFGVGRVVSADGNGPNAKVTVEFGGGVGLKRIIARF 779 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 272/717 (37%), Positives = 426/717 (59%), Gaps = 45/717 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S +LD LN++QR+A +L+LAGAGSGKTR + +RIA ++ SP +I+A+TF Sbjct: 1 MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R L+G + V TFH + RLL+ + ++F I D +DQ + Sbjct: 61 TNKAAREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI 120 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN---PVEQTWQKVYQAYQ 178 + ++ K M + D P + I+ K++G+ ++ + P + + ++YQ Y Sbjct: 121 ITKIKKEMGIKDNDNVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFGEIYQKYD 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E +DF++LLL A +L L+ +L+ +ER+ I+VDE+QDTN+IQY I ++A Sbjct: 181 EVLKANNAMDFSDLLLNARKL-LDDTFVLERIQERYKYIVVDEYQDTNDIQYEMINMIAA 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD+DQSIY +RGA + NI F D+ A T++LE+NYRST IL AN LI+ Sbjct: 240 KYRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIK 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN GK LWTDG+DGE I +Y A DEA F+V +K + +G + ILYR+NA Sbjct: 300 NNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNA 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRVLEE LL A++PY+IYGGM+FF+R+EIKD L+YL L+ N+ND+ F R++N P R + Sbjct: 360 QSRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSV 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAAS--ALQRFMELIDALAQETADMP 476 G++TL+ +++ + ++ +++ +A + + + RAA+ AL+ F L+ + +M Sbjct: 420 GEKTLEKIQEVANEKNISMLEALHYIDE---IPVRAATKLALKEFYNLMQGIYSSLEEMS 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + D ++ +RT Y + + R++N+EEL+ + + E+ M L +L Sbjct: 477 IKEIFDEIL----IRTRYIDSIEDNKEDRVKNIEELLNSIIEL---EKQNPNMSLNEYLD 529 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE-GGRLEEE 595 +L + + + ++ V+LMT+HS+KGLEF VF+ GME+G+FPS +S D LEEE Sbjct: 530 MISLSSSTDEMEDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPS-ISFDSPEEELEEE 588 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGK-EVYHRPSRFIGELPEECVEEVRLR-ATVSRP 653 RRL YV +TRA ++L ++Y+ +R+++GK + RPSRFI E+ ++ +E V + A++ Sbjct: 589 RRLCYVAITRAKKELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYVGGKYASLKGQ 648 Query: 654 VSHQRMGTPMVEN------------------------DSGYKLGQRVRHAKFGEGTI 686 S R TP +EN +S YK+G V H KFG G I Sbjct: 649 SSAPRSFTPKIENFNPFSKDKLGTFGKKSGSQTTSNVNSKYKVGDVVNHKKFGRGKI 705 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 478 bits (1231), Expect = e-133, Method: Compositional matrix adjust. Identities = 287/780 (36%), Positives = 438/780 (56%), Gaps = 77/780 (9%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+SLN QR AV ++V+AGAGSGKTRVL +RIA LM E ++I+A+TFTNKA Sbjct: 8 LESLNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMR-EGVDAFNILALTFTNKA 66 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI L+G ++ +W+GTFH + ++LR PQ+F I D++D RL+ Sbjct: 67 ANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDSQRLING 126 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGL-------RPHHIQSYGNPVEQTWQKVYQAYQ 178 +IK M LD+ + ++ I+S K+ + P +++ + ++YQ Y Sbjct: 127 IIKEMELDKDIYKYKRIQSRISSFKNSLITVRAYFNNPELMEADAMARQPRLGEIYQEYV 186 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY ++ LA Sbjct: 187 DRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKALAD 246 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDD QSIY +RGA + NI F ND+P A+ +LEQNYRST NI+ AAN++IE Sbjct: 247 RFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVEAANSVIE 306 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV-----NRIKTWQDNGGALAECAIL 353 +N RL K ++T+ GEPI ++ + + DE RFV N+++ NG A+L Sbjct: 307 HNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQHQLPNGN----FAVL 362 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+N+QSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N ND+ A R++N Sbjct: 363 YRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRIINF 422 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACREL--LQEKALAGRAASALQRFMELI---DAL 468 P RGIG+ T++ + + + ++++ + L E + L F+ +I AL Sbjct: 423 PARGIGETTMEKLTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNFQAL 482 Query: 469 AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--E 526 Q+ + ++V K +GL ++++ +G ++EN+EE++ + F +ED + Sbjct: 483 NQKANAFEV---AEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVAD 539 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L +L AL + D V LMT+H AKGLEFP V++VGMEE +FPS MS+ Sbjct: 540 SRASLSEYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSI 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV-- 644 LEEERRL YV +TRA ++ LTYAE R +GK PSRFI E+ E ++ + Sbjct: 600 QSRNDLEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTP 659 Query: 645 -------RLRATVSRPV------SHQRM-----GTPMVEND------------------- 667 R + V R + S R+ G P +N Sbjct: 660 SISNPNYRYKPLVDRDIFGEVDKSKLRLQKPISGIPPHKNAPIGEEQQKLRKLKPVNALY 719 Query: 668 ----------SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 +G +G V H +FG G ++++EG+G + Q+ F+ G+K ++ +A+L Sbjct: 720 NSNSNNKNTYNGLDIGTVVYHERFGRGKVISLEGTGNDKKAQINFETGGLKNILLRFAKL 779 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 478 bits (1229), Expect = e-133, Method: Compositional matrix adjust. Identities = 265/731 (36%), Positives = 409/731 (55%), Gaps = 27/731 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LND+QREAV +L+LAGAGSGKT+VL +IA+ + CS Y I+A+TFTNKA Sbjct: 4 LDNLNDRQREAVENTDGPMLILAGAGSGKTKVLTTKIAYCLEKGLCSKYEILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+ ++ + MW+GTFH + R+LR ++F + D DQ+ L+K Sbjct: 64 AKEMKERVENILQENVDSMWIGTFHAICSRILRVEIERIGFERNFTVYDRADQISLVKEC 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRA 184 +K M +D K + + I+ K+ G +I + + + +++Q Y+ R Sbjct: 124 LKDMGVDPKNVEIKNEINTISRLKNAGATEKNIDKEDFDISLSTFTMELFQKYEHKLKRY 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+++ + L+ P + + Y +RF + VDE+QDTN+ QY I+ L + Sbjct: 184 NSLDFDDLIVKTNLLFEENPDLREKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKNDNIC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGD DQSIYGWRGA ++NIQ F DF A+ I LEQNYRST IL AN +I+NN+ R Sbjct: 244 CVGDSDQSIYGWRGANIQNIQNFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT +G+ ++++DEA VV I+ + E AILYR+NAQSR+ E Sbjct: 304 DKNLWTAKNEGDMPIYRRMYSDIDEADQVVQWIEQERYRENPYEEMAILYRTNAQSRLFE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L + +P R+ GG++F++R+EIKD +SYLR++ N ND+ A R++N P RGIG T+D Sbjct: 364 ERLNRLGIPNRVVGGLKFYDRKEIKDCVSYLRIVENLNDNMALNRIINEPKRGIGKTTMD 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + Q S++R +++ Q + + A LQ F LI + ++ M + + + Sbjct: 424 KLLQCSQNRSISMMQYIID-TDLPDFSNATAKKLQEFYYLIKSFPKDQ--MNVAELMEYI 480 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + +G R E+ +TR+EN++E V++ QF + D++ L+ +L ++L Sbjct: 481 LDKTGYRANLEKSTNRDDKTRLENIDEYVSSLYQFVQDNPDKN---LREYLETSSLMTDL 537 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + D V +MT+H+AKGLEF VF G+EEG PS++ D +EEERRL YV +T Sbjct: 538 DKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTIPSRVDED----VEEERRLCYVAIT 593 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL-----PEECVEEVRLRATVSRPV----- 654 RA +KL +T ++RR + + SRFI E+ E +EV R + + V Sbjct: 594 RARKKLYITSVQSRRRFNEFQTKAESRFIEEMENKYKDESPNKEVSFRESFNTKVVDDYR 653 Query: 655 -----SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 S + + +N+ Y+ G +V H KFG G IV + L + F +G+K Sbjct: 654 TEASASITKKQNNVTKNNEKYRAGDKVSHKKFGTGVIVGIVEKENGDELTINFDKKGLKK 713 Query: 710 LVAAYARLESV 720 L ++ A L V Sbjct: 714 LNSSLAPLTRV 724 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust. Identities = 298/816 (36%), Positives = 423/816 (51%), Gaps = 116/816 (14%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN QREAV + LLV+AGAGSGKTRVL RIA+L++V P I+A+TFTNK Sbjct: 35 LLDGLNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTNK 94 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+G MWV TFH + R+LRA L F I D D RL + Sbjct: 95 AAREMKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGLKTTFTIYDQADSQRLAQL 154 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQEACDRA 184 + +N+D K++P R I++ K+E + P + + T KVYQ YQE A Sbjct: 155 VAGGLNIDTKKYPARMLAASISNLKNELIDPETALERADSDQATLVAKVYQGYQERLRAA 214 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT---- 240 +DF +L+++ L P + +HYR RF ++LVDE+QDTN+ QY ++ L G T Sbjct: 215 SALDFDDLIMQTVFLLQRHPAVAEHYRRRFRHVLVDEYQDTNHAQYLLVKALVGGTADEQ 274 Query: 241 -------------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 ++++VGD DQSIY +RGA + NI F D+P A+TI LEQ Sbjct: 275 EVRTADGELVRAAASEVPPAELVVVGDADQSIYAFRGATIRNIVEFERDYPNAQTIMLEQ 334 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ 341 NYRST ILSAAN++I N R K LWT G I+ Y NE DEA+FV I Sbjct: 335 NYRSTQTILSAANSVIARNPQRRAKNLWTAQGGGTRITGYVGDNEHDEAQFVGKEIDALV 394 Query: 342 DNGGAL-AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 D G A+ + A+ YR+N+ SR LE+ ++ MPYRI GG+RF+ER+E+KDAL+YLR +AN Sbjct: 395 DAGEAVFGDVAVFYRTNSASRSLEDVFIRNGMPYRIVGGVRFYERKEVKDALAYLRAVAN 454 Query: 401 RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 +D+ R++NTP RGIGDR V + ++ +A + + LA R+A++L Sbjct: 455 PDDEINLRRILNTPRRGIGDRAEACVSVFAERERIGFGEALQRTGEIPGLAARSANSLSS 514 Query: 461 FMELIDALAQET--ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 F EL+ L E P + T V++ +G R E + + +R+ENL++LV+ R+ Sbjct: 515 FAELLAGLRSEVGFGMEPADLLT-AVLERTGYRAELENSEDPQDGSRLENLDQLVSVLRE 573 Query: 519 FSYN--------------------------------EEDEDLMP-----LQAFLSHAALE 541 + DED+ P L A L +L Sbjct: 574 TTETLLAGGGLAALGLAADAGPEPGDGADAPAEPGPSADEDVPPDAGDLLLAVLEQLSLV 633 Query: 542 A-GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + D+ + V LMTLH+AKGLEFP VF+ G E+G+FP Q +L + L EERRLAY Sbjct: 634 ADADSVPDSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPHQRALGDDSELAEERRLAY 693 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV---------- 650 VG+TRAM++L +T A R +G+ + SRF+ ++P E +E R A Sbjct: 694 VGITRAMKRLYVTRAMMRSAWGQPAANPASRFLDDIPAELIEWRRTDADARAGGFIGDSD 753 Query: 651 ---------------------------SRPVSHQRMGT-----------PMVENDSGYKL 672 S PV+ R G+ P + +L Sbjct: 754 FEGDYGYGRFGGRSGSRFGSGSGFGGRSAPVTASRFGSNSPSRAGARRGPTLGARPALEL 813 Query: 673 --GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 G RV H K+G G ++ ++G+G+ + + F G Sbjct: 814 AVGDRVSHDKYGLGKVLAVDGAGQRATATIDFGAAG 849 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 280/745 (37%), Positives = 421/745 (56%), Gaps = 40/745 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S+L+ LN++Q++AV +L+LAGAGSGKTRV+ HRIA L+ N I A+ Sbjct: 1 MTSSFLI-GLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLV--NHGIDRICAL 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEM R+ L+ + + TFH L +LR F + D+ Q Sbjct: 58 TFTNKAAAEMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQE 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYG-NPVEQTWQKVYQAYQ 178 LLK+++K ++LD K + P YI+ KD+ L P +++ G +T +Y+ Y+ Sbjct: 118 SLLKQVVKDLSLDPKFYKPSMLGNYISGLKDKMLSPETYLEKEGRTDFSKTVSAIYKEYE 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + D DF +L+ + +L+ P + YR ++ ++VDE+QDTN +QY + LLAG Sbjct: 178 KRKDANRAFDFGDLIWKTVQLFQKSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAG 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGDDDQSIY WRGA + NI F DFP + I+LE+NYRS+SNI+ AA+ +I Sbjct: 238 EKRNLCVVGDDDQSIYSWRGADIGNILNFEKDFPESTVIKLEENYRSSSNIILAASKVIS 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN R K+++T+ G P+ L NE +EA V+ RI++ G AI YR+N+ Sbjct: 298 NNTQRKQKEIFTNNPKGSPVVLNEFENESEEAHGVITRIRSAYSYGTEYKNIAIFYRTNS 357 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EEAL +PY+I+GG RFF+R EIKD ++YL +++N D + R+VN P RGI Sbjct: 358 QSRYFEEALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPPRGI 417 Query: 419 GDRTLDVVRQTSRDRQLTLWQAC--RELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GD + +R+ S ++ ++L +A ++ +KA + F +LI+ + + ++ Sbjct: 418 GDSGIGKIREFSLEKGISLLEALGQEDIPLKKAAKSKGKELYSLFSDLIEKVEKSSSPSE 477 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + ++ ++ SGL + E E+ R+ENL+ELV + ++ E++ D L+ +L+ Sbjct: 478 IALE---LLNRSGLVSHLRDEGTEESIARLENLQELVNSIEEY---EKNSDSPSLEEYLN 531 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-DEGGRLEEE 595 +L E ++ D V LMT+H+AKGLEF VF+ G+EEG FP MSL D EEE Sbjct: 532 QISLITSEEESKELTDYVNLMTVHNAKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGDEEE 591 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC-VEEVRLRATVSRPV 654 RRL YV +TRA ++L L+Y T R +GK PSRF+ E+PEEC VE V T P Sbjct: 592 RRLFYVALTRAREQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSP- 650 Query: 655 SHQRMGTPMVEN--------DSGY-----------KLGQRVRHAKFGEGTIVNMEGSGEH 695 G P+ +SG+ K G RVRH +FG GTI + G ++ Sbjct: 651 ----QGAPLASKTRRIEEKFNSGFSSTPDPTNLYLKPGDRVRHKQFGIGTIQTISGKEKN 706 Query: 696 SRLQVAFQGQGIKWLVAAYARLESV 720 +++ + F G K AY LE + Sbjct: 707 TKVSIRF-GNVEKNFFVAYTPLEKL 730 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 290/762 (38%), Positives = 423/762 (55%), Gaps = 55/762 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L SLND Q+ AV LV+AGAGSGKTRVLV+++ L+ P +MA+TFTNKA Sbjct: 6 LSSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIR-SGYDPARLMALTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+ +G + + +GTFH + R+LR + + +DF I D+ D LL+ + Sbjct: 65 AKEMKERVASEIGPTAYRIQMGTFHSVFSRILRENAIHLGYTRDFSIYDTNDTKSLLRHV 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT----------WQKVYQA 176 +K MN+D+K + I+ K++ + P +SY + + ++Y Sbjct: 125 MKRMNIDDKVYRLNAVQHRISMAKNQLISP---ESYAANKDLSRYDIDCRMPRMAEIYSL 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y C + +DF +LL + + L+ + P +LQ YR+R +L+DE+QDTN QY R L Sbjct: 182 YTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTYRDRIDYLLIDEYQDTNFAQYLIARQL 241 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 G+ GKV +VGDD QSIY +RGA+VENI F FPG++ +LE+NYRST +I++AAN+L Sbjct: 242 MGEKGKVFVVGDDAQSIYSFRGAKVENILGFSKSFPGSKLFKLEENYRSTQSIVNAANSL 301 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYR 355 I N GR+ K+++++ GE I L + EA V + I + ++ AILYR Sbjct: 302 IAYNEGRIPKQVFSNKQVGERIRLTGCLSGYLEAYTVADSIVERRMQEYCPYSDFAILYR 361 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSRV EEAL + ++P+RIYGG+ F+ R+EIKD L+Y RLI N NDD A RV+N P Sbjct: 362 TNAQSRVFEEALRKHNIPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVINYPK 421 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL--AQETA 473 RGIGD TL + + + +LW E +K +A+A +R E + + QE+ Sbjct: 422 RGIGDTTLSRLNEIATASSRSLWDVLSE--SQKGFPDLSATARRRLGEFVSLIRELQESE 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDLMPL 531 L+ Q V+K SG+ +K +G +R ENL+EL+ ++ SY EE + L Sbjct: 480 YESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLKELLNGIEEYGTSYAEERGEKPSL 539 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 FL+ L + D V LMT+H+AKGLEF +FIVGMEE +FPS M+ E G Sbjct: 540 GTFLNEVVLLTDQDTEGVVGDYVTLMTVHAAKGLEFKHIFIVGMEENLFPSMMNATEQG- 598 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV------- 644 LEEERRL YV +TRA + +++A R G+ RPSRF+ EL + VE Sbjct: 599 LEEERRLFYVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVERRVPQEMLG 658 Query: 645 ------RLRATVSRPVSHQRMGTP-------------------MVENDSG-YKLGQRVRH 678 L SR + +R+ P MV G + V H Sbjct: 659 GHSQGDELPIHFSRSDAFERLPQPEPIRRRLVRVGSSPVHEERMVHQQIGDLCVDDTVAH 718 Query: 679 AKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 A+FG G I ++EG G++++ +V+FQ G K L+ +A+L V Sbjct: 719 ARFGIGIIESLEGEGDNAKAEVSFQQVGRKRLLLRFAKLSKV 760 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 280/753 (37%), Positives = 428/753 (56%), Gaps = 44/753 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL SLN +Q++AV + ++++AGAGSGKTRV+ RIA++++ ENC+P I+A+TFTNK Sbjct: 18 LLKSLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTFTNK 77 Query: 66 AAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EMR R+ +++GT S G+W+GTFH RLLR H D+ I D++D L+K Sbjct: 78 AANEMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSDYTIYDADDSKNLIK 137 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDR 183 ++I + + P I+ K+ + P + Q+ + + + +V+ Y E + Sbjct: 138 QIITELGIATDVLAPNAVQGKISMAKNRLVTPEQMSQNASDFISEKTAEVFYKYNERLQK 197 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +LL++ +L+ P IL HY+ERF I++DE+QDTN QY ++LAG + Sbjct: 198 NNALDFDDLLIKPIKLFNEHPEILAHYQERFQYIMIDEYQDTNRAQYIVAKMLAGQHRNI 257 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDD QSIY WRGA + NI F ND+ A RLE+NYR T IL AN +I NN + Sbjct: 258 CVVGDDAQSIYSWRGADIANILGFQNDYKEATICRLEENYRCTKTILKVANTVISNNKEQ 317 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRV 362 L K L+T GEP++L+ A +E EA V I+ + +G ++ AI YR+NAQSR Sbjct: 318 LEKTLYTSNETGEPVTLFEATDERREAEKVAMAIRERKLSSGNQNSDFAIFYRTNAQSRA 377 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE+AL + YR++GG+ F++R+EIKD ++YLR I N D+ + R++N P RG+G+ + Sbjct: 378 LEDALRFNGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLLRIINFPARGVGETS 437 Query: 423 LDVVRQTSRDRQLTLWQA-CRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 L ++ + + +L++A CR + L R SAL F LI+ L + + Sbjct: 438 LKRLKDIAIEEGFSLYEAICRATHYD--LQNRLISALNDFRMLIEDLREIAQQHTAYEVV 495 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 +++ + L + + E + R +NL+E + RQF ++ ED L AFL A+L Sbjct: 496 AELLRKTRLLEILKNENTAEANARYDNLQEFLNFARQFC-DKSAED-PSLNAFLQSASLA 553 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + AD + V LMT+H+AKGLEFP VF+ G+EE +FP ++ DE LEEERRL YV Sbjct: 554 TDQDNADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFP--LNPDEPRELEEERRLFYV 611 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV--------EEVRLRAT---- 649 +TRA +KL +++A++R +G+ + SRFI EL V +E+RL+ Sbjct: 612 ALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEELDGGSVVTEGGKLLDEIRLQDAEKSR 671 Query: 650 ----------------------VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 V+ S Q T S +G +V+H FG G ++ Sbjct: 672 YHYDDSEYTSRSNFSDRAQSRRVAPAASRQTSLTSSSAKKSAIAVGMKVQHKIFGTGKVM 731 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 ++GSG+ ++++V F+G G K LV YA L V Sbjct: 732 AVQGSGDDTKIKVFFRGAGEKTLVLKYANLTVV 764 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 280/766 (36%), Positives = 430/766 (56%), Gaps = 52/766 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD+LN +Q++AV LL+LAGAGSGKTRVL RIA+L+ SP++I+A+TFTNK Sbjct: 3 ILDNLNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ +L+ +WV TFH ++LR + F I D++D ++K+ Sbjct: 63 AAREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAVVKQ 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVEQTWQKVYQAYQEACDR 183 ++KA+N+D K++P + + I++ K++ + + S + +VY Y++ Sbjct: 123 VLKALNIDNKEFPEKTCLNVISNAKNDFIDAEEFAVNSKFGVDNNVYARVYSEYEKRMKN 182 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA---GDT 240 +DF ++L++ EL+ L++Y+ RF ILVDE+QDTN +Q+ ++LLA + Sbjct: 183 NNALDFDDILVKTVELFQTDKDTLEYYQRRFRYILVDEYQDTNIVQFKLLKLLANYVNED 242 Query: 241 GKV----MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 G++ +VGDDDQSIY +RGA + NI F +P A I+LE+NYRST NIL AAN + Sbjct: 243 GEIENNLCVVGDDDQSIYKFRGADIRNILNFEKIYPNALVIKLEENYRSTGNILEAANGV 302 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYR 355 I NN R K+LWT G IS EA V N + +T + ++ A+LYR Sbjct: 303 ISNNKERKDKRLWTSKEGGASISYKTYDTGEREANGVANTVLRTVNEGKAKYSDIAVLYR 362 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSR +EE + +++PY++YGG F+ R+EIKD L+YL+ I N DD R++N P Sbjct: 363 TNAQSRAIEEKFIYSNIPYKLYGGTNFYSRKEIKDILAYLKTINNPKDDTQVRRILNVPK 422 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD- 474 RGIG T D + + +++++ ++AC + L+ RA + +++F+ I A +E D Sbjct: 423 RGIGSATEDKIADYALEKEISFFEACMRVQSIPGLS-RAVAKVEKFVAFIGAKIREFKDT 481 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + + + + +I++ G + E ++ Q RIEN+EEL+ F +D + L F Sbjct: 482 VCMKAEVEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGNF 541 Query: 535 LSHAALEAGEGQADTWQ---DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD--EG 589 L+ +L D+ D V LMTLHSAKGLEF VFIVGMEEG+FPS+M L + Sbjct: 542 LADVSLATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGLFPSRMCLFAMDE 601 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE------CVEE 643 LEEERRL YVG+TRAM+KL L+ A +R L G ++ PSRFIGE+PE ++ Sbjct: 602 SELEEERRLCYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPEHLLSVGGSIDN 661 Query: 644 VRL----------RATVSRPVSHQR-----------MGTPMVENDSG--------YKLGQ 674 +R R S+ +Q G P + G +G Sbjct: 662 IRQKRNENLYAGDRNAFSKSAGYQTGGASSDKRNIFSGNPYISKGFGGGIGVSDSVNIGD 721 Query: 675 RVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RVRHAKFG G ++++ + ++ + GI+ + A L+ + Sbjct: 722 RVRHAKFGAGEVIDLVRENDAVSIKFDNETFGIRKMKLGMAGLKKI 767 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 291/766 (37%), Positives = 425/766 (55%), Gaps = 61/766 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LN Q+ AV LL+LAGAGSGKTRV+ HRIA L+ P++I+AVTFTNK Sbjct: 3 FVKHLNQPQKSAVLHGEGPLLILAGAGSGKTRVITHRIAHLIHNHGVRPWNILAVTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--AHHMDANLPQDFQILDSEDQLRLL 123 AA EM R+ +L+G + + TFH R+LR HH+ F I D D RLL Sbjct: 63 AAREMSERVSRLLGGGDAPL-IATFHAACGRILRREIHHL--GFDSSFAIYDERDCERLL 119 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEAC 181 K L+K M+LD+K++ PR I+ K+ GL PH + + G+ ++Y AYQE Sbjct: 120 KDLLKDMDLDDKKFSPRIVAARIDDYKNRGLFPHDLDPVATGDIFNAKVVQIYAAYQERL 179 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 + +DF ++L++ L P + Q +ERF I+VDE+QDTN +QY IRLLAG+ Sbjct: 180 RKCNALDFGDMLIQTVRLLEQFPEVRQRCQERFQWIMVDEYQDTNPVQYRLIRLLAGERR 239 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIY WRGA + NI F DFP +RLEQNYRST+ IL AA A++ N Sbjct: 240 NLCVVGDDDQSIYSWRGADIRNILEFEKDFPDVAVVRLEQNYRSTTTILKAAGAVVSRNI 299 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 GR GK LWT+ +GE I + ++ +EAR V I + + G L E A+ YR+NAQSR Sbjct: 300 GRRGKTLWTENPEGEKIRYHRVESDREEARLVAREIVSLRSRGIPLEEMAVFYRTNAQSR 359 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 ++EEAL+ ++PY I GG+RF+ R E+KD L+YLR++ N D+ + +R++N P+RGIG Sbjct: 360 LVEEALVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVPSRGIGGA 419 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA--DMPLHV 479 T+D + Q + + A E L + + F+++++ + A +P Sbjct: 420 TIDRISQRVASSGASFYAAMAECAGSGLLGSGPRARVASFVDMMERFREMVALRGLPELC 479 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 QT V+++SG + + ++ R+ENLE+L+ A +F E E L AFL + Sbjct: 480 QT--VMEESGYLARLRESRDQEDSERLENLEQLLAAMEEFC---EKEPQAGLSAFLEQVS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + Q + +V LMTLH+AKGLEF VF++GMEE +FP +LD+ +EEERRL Sbjct: 535 LVSDLEQGGQGKPSVTLMTLHAAKGLEFRAVFMIGMEERLFPHVRALDDLDGMEEERRLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------VRLRATVS 651 YVG+TRA ++L L R L+G+E + PSRF+ ++P +++ + R+ Sbjct: 595 YVGMTRARERLYLLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGFRSAAE 654 Query: 652 R-------------PVSHQ-RMGTPMVENDSGYKL------------------------- 672 + + H R + +D G+ L Sbjct: 655 QAGRNGQEPSTGIIAMGHSGRREKTVARHDGGHNLAQVVSACDEIEVIPEPPEEHDGVFI 714 Query: 673 GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 G +VRH FG+GTI +EGSGE ++ V F G K L+ +A LE Sbjct: 715 GMKVRHGTFGQGTIRKLEGSGESQKVIVWFNSVGPKKLMLRFAGLE 760 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 471 bits (1211), Expect = e-131, Method: Compositional matrix adjust. Identities = 270/641 (42%), Positives = 377/641 (58%), Gaps = 14/641 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D+ + LN Q EAV LVLAGAGSGKTRVL RIA L+ N +P+ I+AV Sbjct: 20 LDLDAITRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTTRIARLIGTMNVAPHEILAV 79 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RI + +G GMW GTFH L R+LR Q+F I D +D + Sbjct: 80 TFTNKAAGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGVAPLVGREQNFTIYDEDDAI 139 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQE 179 +KR+++ NL K++ P+ + I+S K+ + P ++ + VY + Sbjct: 140 GAVKRVMERRNLSPKEFAPKAILSAISSAKNALISPSEFARNARDTFATAVAGVYTDLEV 199 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +A V F +LL+ + HY+ RF +LVDE+QDTN QY +++L+ G Sbjct: 200 ALQQANAVTFDDLLVLPVRALETDEALRAHYQRRFRYLLVDEYQDTNAAQYRFVQLMGGG 259 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 VM+VGDDDQSIYGWRGA + NI F DFPGA +RLE+NYRST N+L+ ANA+I Sbjct: 260 YRNVMVVGDDDQSIYGWRGADIRNILDFERDFPGARIVRLEENYRSTPNVLALANAVIAE 319 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNA 358 N R GK L GE ++L A +E DEA F+ I T A +CAILYR+NA Sbjct: 320 NTERRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTRMSRSDLARRDCAILYRTNA 379 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR +E+A + ++PYR+ G +RF++R+EI+D ++YL+L+AN DD AF R VN P RG+ Sbjct: 380 QSRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNVPKRGL 439 Query: 419 GDRTLDVV-RQTSRDRQLTLWQACR-ELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GD T+ ++ Q + + L A R ++L A RA AL+ F L+ Q M Sbjct: 440 GDATIALLAEQAIAEGKPMLEMATRFDVLSGMRPAARA--ALEDFGNLV----QRLRTMA 493 Query: 477 LHVQTDRVIKDSGLRTMYE---QEKGEKGQTRIENLEELVTATRQFSYNEEDE-DLMPLQ 532 + D ++++ Y + +G +G RIEN+ E++ + +E E L PL Sbjct: 494 VDAAVDELLRELVQVIKYADHLRAEGPEGLERIENVREMIAGAAEVVADEGGEVGLTPLD 553 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 FL + L AG + D DAV MT+H+AKGLEFP VF+ G+E+G+FP + ++ +L Sbjct: 554 HFLQSSTLVAGVDKLDPNADAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARAAEDPAQL 613 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 EEERRL YVG+TRA +KL LT AE RR G+ +Y PSRF+ Sbjct: 614 EEERRLFYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFL 654 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Query: 651 SRPVSHQRMGTPMVENDSG--YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ--G 706 S P +R P E+ ++ G+RV+HAKFG GTI + GSG +++++ F + G Sbjct: 745 STPARRERAPEPEDESQDAPMFRPGERVKHAKFGTGTIAELSGSGRDTKVRIDFDDEEIG 804 Query: 707 IKWLVAAYARLE 718 K LV A A+LE Sbjct: 805 RKTLVLAQAKLE 816 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust. Identities = 295/764 (38%), Positives = 416/764 (54%), Gaps = 54/764 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D S +LD LN QR+AV A +LVLAG GSGKTRVL R+A+L+ V P+ I+AVT Sbjct: 3 DASTILDGLNPAQRQAVTAAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVT 62 Query: 62 FTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAA EMR R+ +L+G + + VGTFH + R LR + +DF I D++DQL Sbjct: 63 FTNKAAREMRDRLEKLLGPGEAAALTVGTFHSICARFLRRDSIHLGRERDFAIYDTDDQL 122 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP----HHIQSYGNPVEQTWQKVYQA 176 R++KR+++ +NLDEK+ PR I+ K+E + P H SY E+ + + Sbjct: 123 RVMKRVLRDLNLDEKKHAPRAIHAAISRAKNELIDPDAYSRHAHSY---FEEVVARCFAR 179 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQE A +DF +LL+ L+ P +L+ Y+ER+ +L DE+QDTN QY ++ L Sbjct: 180 YQELLRGANALDFDDLLVETVRLFEEHPAVLERYQERYGFLLADEYQDTNRAQYVLLKQL 239 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + +VGD+DQS+Y +RGA + NI F D+P A+ I LEQNYRST IL A A+ Sbjct: 240 ASRHHNIFVVGDEDQSVYAFRGADIRNILSFERDYPEAQVILLEQNYRSTQAILDVAQAV 299 Query: 297 IENN-NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL--AECAIL 353 I + R K+LWT +G + + +++ +EA+ V I GGA + AI+ Sbjct: 300 INRSAQRRRDKRLWTRNGEGVLVQVIEGYDQDEEAQLVAGEIARLI-AGGAYQPGDIAIM 358 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSR +EEAL+ PY I GG RF+ER+EIKDAL+YLRL N DD + RV+N Sbjct: 359 YRTNAQSRAIEEALIARQAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNW 418 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA----------------LAGRAASA 457 P RGIG RT + + + + + L+ L + RA +A Sbjct: 419 PARGIGQRTQEDLERRAGAAAVPLYVMLHTLAANAEAAADQTTSPAPARTGEMPSRARNA 478 Query: 458 LQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKG-EKGQTRIENLEELVTAT 516 L F+ LID + L D + + G R +E G E+G R N+ EL Sbjct: 479 LLGFLTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEEGDDRWNNVMELRNVA 538 Query: 517 RQFSYNEEDEDLMP-LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGM 575 Q++ D L L FL AL + ++AV +TLH AKGLEFP VF+VG+ Sbjct: 539 EQYA----DLPLASQLSTFLEEVALVSDIDTLQEERNAVTCITLHQAKGLEFPVVFLVGL 594 Query: 576 EEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 EEG+ P S D+ L+EERRL YVG TRA ++L L +A R YG+ PSRF+ + Sbjct: 595 EEGLLPHARSADDRDALDEERRLFYVGATRAKERLYLLHAFRRATYGRTEIATPSRFLHD 654 Query: 636 LPEECVEE-----------VRLRATVSR--------PVSHQRMGTPMVENDSGYKLGQRV 676 +P + ++ V RA R PVS P + GQ+V Sbjct: 655 IPPDLLQRAPKRGYAAAQMVTGRAAALRNPRRNQAAPVSPH-SAAPDGPRAISFFAGQKV 713 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 HA+FGEG +V+ + + VAF G+G+K L+A++A L+ V Sbjct: 714 HHAQFGEGIVVSSKLVEGDEEVTVAFVGKGVKRLLASFANLQHV 757 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 255/720 (35%), Positives = 418/720 (58%), Gaps = 7/720 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ ++ LN++Q E V + +LVLAGAGSGKTR L++R A+L+ + P++I+ V Sbjct: 8 MNNNFYASQLNERQLEVVTDTENPVLVLAGAGSGKTRSLIYRTAYLIKEKQVHPWNILIV 67 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++ R+ +L+ +WVGTFH + R+LR +F I D + Q Sbjct: 68 TFTNKAARELQERLEKLLNIPVRSLWVGTFHAICCRILRFESAHLPFNANFSIYDEDTQK 127 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ---TWQKVYQAY 177 LLK++ K D++ +P + I+ K++ + P I+ G + T+ +Y+ Y Sbjct: 128 SLLKKIYKEYGFDKQSFPINNILTRISRYKNKLMLPEDIKFQGEDKDSEFATFLNIYRLY 187 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ +DF ++LL +L LN + + YR +F +++DE+QDTN Q+ + +A Sbjct: 188 QQQLLLNQALDFDDILLWTAKLLLNNNTVREKYRAQFQYVMIDEYQDTNKAQFEIVHQIA 247 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G +V +VGDDDQ+IY +RGA + NI F D+ +IRLEQNYRST NIL+ ANA+I Sbjct: 248 GGHQRVCVVGDDDQAIYSFRGASLRNILEFEKDYNSVHSIRLEQNYRSTGNILALANAVI 307 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN R K+LW++ G+ L NE++EA + + I Q G L E A+LYR+N Sbjct: 308 ANNRRRHSKELWSELPVGDKPVLAVYENEIEEANRITDAILKLQRKGIPLREIAVLYRTN 367 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV E AL+QA +PY I GG++F++R+EIKD L+YL +++N ND+ + R++N P RG Sbjct: 368 AQSRVFESALIQAEIPYSIVGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPARG 427 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG +++ + + +++L+ A + + + L A + F +++ Q + P Sbjct: 428 IGQTSINRLIGFANKTRISLFSAIQNVEAIEELGNPAKKRISEFCLMLERWQQSVSRKPA 487 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS--YNEEDEDLMPLQAFL 535 ++++ L + Y+ + R ENL E VT+ +FS + +E+E + +L Sbjct: 488 LEMVKTIVEELELISHYQNSNDPQDIARAENLVEFVTSVSEFSEHFYQENEREPLIADYL 547 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + AL+ + D+++LMTLH+AKGLEF VFI G+E+ + P +M ++ +EEE Sbjct: 548 PYVALQTDLDRVKENMDSIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQDSIEEE 607 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA L L+Y ++RRLY + PS+F+ E+ +++P Sbjct: 608 RRLFYVGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPPK 667 Query: 656 H-QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 ++ + E+ YK+GQ+V H ++G G I++++G GE +RL ++F G + ++ Y Sbjct: 668 RIKKTNKVITESQKYYKIGQKVFHPEYGLGVILSVDGEGEDARLTISF-GNRLAKIIGRY 726 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 277/702 (39%), Positives = 408/702 (58%), Gaps = 23/702 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN-CSPYSIMA 59 M+ +Y+ D LN+ Q AV LV+AGAGSGKTRVL ++IA+L+ EN +P++I+A Sbjct: 1 MNTNYI-DELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILA 59 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKAA EM+ RI + +G + +W+GTFH + R+LRA F I D+ D Sbjct: 60 LTFTNKAAREMKERIARQVGMERARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTAD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-------QTWQ 171 LL+ +IK M LDEK + P I++ K+ + P + E + Sbjct: 120 SKSLLRSIIKEMGLDEKTYKPGVVQARISNAKNHLVTPTGYAANKEAYEGDMAAKMPAIR 179 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 +Y Y + C +AG +DF +LL+ + L+ + P +L Y+++F +LVDE+QDTN Q++ Sbjct: 180 DIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTRYQDQFHYVLVDEYQDTNYAQHS 239 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I L + ++ +VGDD QSIY +RGA ++NI F +P + +LEQNYRST I+ Sbjct: 240 IILQLTKENQRICVVGDDAQSIYSFRGADIDNILYFTKIYPNTKVFKLEQNYRSTQTIVC 299 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAEC 350 AAN+LIE N ++ K ++++ GEPI ++ A+++++E V N+I ++ AE Sbjct: 300 AANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDVEEGDIVANKIAELRREYHYGYAEF 359 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+NAQSR+ EEAL + SMPY+IYGG+ F++R+EIKD ++Y RL+ N ND+ AF+R+ Sbjct: 360 AILYRTNAQSRIFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRI 419 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASA-LQRFMELIDALA 469 +N P RGIGD T+ + + + ++LW A E L + A LQ F ELI+ Sbjct: 420 INYPARGIGDTTVGKIISAATNHGVSLWAAVCEPLSYGLDINKGTHAKLQGFRELIEGFI 479 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY--NEEDED 527 + AD + +I+ SG+ Q+ + +R EN+EELV F EE Sbjct: 480 ADQADKNAYEIGTDIIRQSGIINDVCQDTSPENLSRKENIEELVNGMNDFCALRQEEGNP 539 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDA--VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 + L FLS AL + +D D V LMT+HSAKGLEF VF+VG+EE +FPS M Sbjct: 540 NVSLTDFLSEIALLTDQ-DSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENLFPSGMV 598 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 D LEEERRL YV +TRA + L++A+TR YGK + PSRF+ ++ V+ +R Sbjct: 599 GDSPRALEEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRFLRDID---VDYLR 655 Query: 646 L--RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 L A VSR V + G E + G+ A FG + Sbjct: 656 LPHEAGVSRAVD-EGAGRFRREIEGGFARSTSPSRAPFGSNS 696 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust. Identities = 282/712 (39%), Positives = 409/712 (57%), Gaps = 19/712 (2%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 D LN Q EAV LLVLAGAG+GKTRV+ +RIA L++ +I+AVTFTNKAA Sbjct: 6 DELNKAQYEAVTTTEGPLLVLAGAGTGKTRVITYRIAHLINNMRVPSRNILAVTFTNKAA 65 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ RI +L+ +W+GTFH + RLLR A L F ILD +D+L ++ +I Sbjct: 66 GEMKERILKLVDYEDADIWIGTFHSICLRLLRRDPEKAGLEPGFGILDQDDRLATIRDII 125 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 K +N+D K++PP++ M I++ K+ RP+ + + V+ AYQ+ LV Sbjct: 126 KNLNIDHKKYPPKKYMNTISTYKNT--RPYVDGKKPEELLHMFADVFAAYQQRLKDQKLV 183 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF ++L ++ N P + +Y+E F ILVDE+QDTN+IQ+ ++ LLAG G + +VG Sbjct: 184 DFDDMLALTIRMFKNHPDTVGYYKELFRYILVDEYQDTNDIQFLFLHLLAGLDGNLCVVG 243 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA + NI F F G + IRL +NYRS IL AAN LI NN R GK Sbjct: 244 DDDQSIYGWRGADIRNILEFDTIFKGTKIIRLLENYRSRPQILQAANKLIRNNKLRKGKD 303 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 L +G + + E DEA FV++++ + + G +E AILYR+N QSR E L Sbjct: 304 LVAARDEGGLVQVLPVSRETDEAEFVIDQVNKYLEEGVKGSEIAILYRTNGQSRNFEVLL 363 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 + + Y++ G + F++R+EIKD LSYLRL N D +F R V P RGIGD T++ + Sbjct: 364 NRQGVAYKVIGSVGFYQRREIKDILSYLRLFDNPYDSVSFRRSVKAPPRGIGDTTINKIT 423 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQTDRVI 485 + +++ +A + + L G + + ++++ + LA + ++M V+T + Sbjct: 424 DYASGNGISILEAVYAMNDQ--LRGAQKESFRGYLKIFNELAACLKVSEM---VKTVMDM 478 Query: 486 KD-SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 D SG YE E ++ + RI N+EEL A S+ + D M + A + + Sbjct: 479 TDYSGYVKRYEDE--QEAERRISNIEELYNAA--VSFENSNSDAMITDFLAATAIATSSD 534 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 AD+ VQLMT+HSAKGLEF VF+ G+E G+FP SL+E LEEERRL YVGVT Sbjct: 535 EPADS---CVQLMTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEERRLCYVGVT 591 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RA Q L +TYA TR +YGK + S F+ E+ V R R+ + P + + V Sbjct: 592 RAKQNLHMTYASTRMVYGKYMPQSRSVFLDEMG--IVGFSRSRSDMPLPKASRPTYQKKV 649 Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 +G K G +V H KFGEG +V + G+G+ + V F+ G+K + + + Sbjct: 650 VEVNGIKNGSKVSHDKFGEGMVVAISGTGDSANADVFFKTSGLKKIRVTFLK 701 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 468 bits (1205), Expect = e-130, Method: Compositional matrix adjust. Identities = 279/733 (38%), Positives = 428/733 (58%), Gaps = 35/733 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSP-YSIMAVTFTNK 65 +DSLNDKQ+EA+ LL+LAGAGSGKT+V+ +IA+L +EN P + I+A+TFTNK Sbjct: 3 IDSLNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYL--IENEVPSWRILAITFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ L+ MW+GTFH + R+LR + + ++ I D DQ ++K Sbjct: 61 AAREMRERVAMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQNTIIKE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ----KVYQAYQEAC 181 K +N++++ + R + I+S K+E L P + GN E + K+Y+ YQ Sbjct: 121 SYKELNINKEIYNSRTILSKISSWKNEELTPSEVLD-GNK-EDIFNFNAGKIYEFYQNKL 178 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +LL++ EL P + + Y+ +F I VDE+QDTN+IQY I+L G Sbjct: 179 KENNALDFDDLLIKTVELLREFPDVREFYQNKFKYIFVDEYQDTNSIQYKLIKLFCGKAP 238 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD+DQSIY WRGA + NI F DFPGA+ I+LEQNYRST NIL AN++I+NN Sbjct: 239 NLTVVGDNDQSIYKWRGADISNILNFQKDFPGAKIIKLEQNYRSTQNILDVANSVIKNNP 298 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARF-VVNRIKTWQDNGGALAECAILYRSNAQS 360 L K LWT GE + Y F+ +E F V N+I G + + AILYR+NAQS Sbjct: 299 QELSKSLWTKRQGGEKV-YYKEFSVSNEEEFAVTNKILGLNYKGYSFEDMAILYRTNAQS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R EE+L + + Y+I GG+RF++R E+KD ++YL++I N D+ A R++N P RGIGD Sbjct: 358 RGFEESLSREGINYKIVGGLRFYDRAEVKDIMAYLKVINNPLDEIALLRIINKPKRGIGD 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +++ +R + + L++++ + + + L RA ++ F LI+ L + + + Sbjct: 418 SSVEKIRDYAINNNLSMFEVIKNIENYEDLNVRAKKNIKSFANLINLLIERKDLLNVGEL 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +S + + + +T+I N++EL++ SY++E L +LS+ +L Sbjct: 478 AELVVDESQYVEDLKNQNTLEARTKISNIDELISNI--MSYDKE----TSLSDYLSNMSL 531 Query: 541 EAGEGQADTWQDA--VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 D DA V LMT+H+AKGLEF VF+VGMEEG+FP + DE +EEERRL Sbjct: 532 LT---DIDKTSDAKGVNLMTVHAAKGLEFKIVFLVGMEEGLFPI-IRQDEDEDIEEERRL 587 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE--ECVEEV--RLRATVS--- 651 YV +TRA L ++ ++TR LYGK SRFI E+ + E VEE RL + Sbjct: 588 CYVAITRAEDLLFISSSKTRYLYGKMTPKIKSRFINEMQDTIEIVEEKNQRLIDVIDYSG 647 Query: 652 ----RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 R +++++ TP ++ +G +V+H FG+G IV + + V+F+ +G+ Sbjct: 648 KIDERITTYKKVQTPK-KSIKSVNVGDKVKHKIFGQGMIVQKKEKNGDIEVVVSFENKGL 706 Query: 708 KWLVAAYARLESV 720 K L+ + A +E + Sbjct: 707 KKLLLSVAPIEVI 719 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 279/690 (40%), Positives = 398/690 (57%), Gaps = 55/690 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S +DSLN QREAV LLVLAGAGSGKTRVL +RIA L+ + +P+ I+A+TF Sbjct: 1 MSIDIDSLNGPQREAVVTVDGPLLVLAGAGSGKTRVLTYRIANLIENHDVAPWEILAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAAAEMR R+ L+G GMWV TFH + R+LR+ ++F I D++DQ RL Sbjct: 61 TNKAAAEMRERLNGLVGPRCRGMWVSTFHSMCVRMLRSDAEKLGFTRNFTIYDTDDQKRL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEAC 181 K ++ +++D K++P M I++ K+E + P + G+PV + +VY QE Sbjct: 121 YKEIMAELDIDPKRFPVNALMNRISTAKNELVVPSAFEKEAGDPVGKVASRVYSRLQERL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 A DF +LLL A+ L N + Y++RF I+VDE+QDTN+ QY+ LLA Sbjct: 181 KAANAFDFDDLLLYAYLLLKNHEDVRSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEGHK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 +M+VGDDDQSIY WRGA + NI F D+P A T++LEQNYRS N+L+AANA+I NN Sbjct: 241 NIMVVGDDDQSIYSWRGADLRNILEFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIANNQ 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R KKL+T DG+ I +Y A +E DE R++ I+ + G + + A+ YR+NAQSR Sbjct: 301 HRKAKKLFTSAEDGDKIQVYMAADERDEGRWIAGEIEKQRAAGLSYNQVAVFYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +LE+ LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG Sbjct: 361 MLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINVPRRGIGKT 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + Q +R+ +T + + + L A A+ F+ L++ D+ ++T Sbjct: 421 TIERIEQFAREMGMTFMEGAELAIVDPELRASARQAIGEFVGLVNEARTYGGDLRKVIET 480 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED-------------- 527 +I SGL + E ++ + RIEN++E + +F+ EDED Sbjct: 481 --IIDKSGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHEDEDALYEAPTAEPADAP 538 Query: 528 -LMPLQ-----------AFLSHAALEA-----------GEGQADTWQ------------- 551 L P+ AF L A G+ AD + Sbjct: 539 ALAPVPSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFIEWVRLRTDLDTVAE 598 Query: 552 --DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQK 609 AV +MT+HS+KGLEF VF+ GMEE +FP S+ + +EEERRLAYV +TRA +K Sbjct: 599 DGHAVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNSVGDAAGIEEERRLAYVAITRARKK 658 Query: 610 LTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 L LT A R+++G+ + SRFI E+P E Sbjct: 659 LFLTCAYARQIFGQTSSNPISRFIQEIPSE 688 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 255/735 (34%), Positives = 418/735 (56%), Gaps = 37/735 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ ++ND Q +A+ ++V+AGAGSGKTRVL +RIA+L+S +N +I+A+TFTNK Sbjct: 3 LVQNMNDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI L+G + +W+ TFH + R+LR H ++F ILD+ +Q ++K Sbjct: 63 AAKEMKERIYALVGETSKYIWINTFHSMCVRILRQHIELLGYNKNFTILDTSEQKSIIKN 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDE--GLRPHHIQS-YGNPVEQTWQKVYQAYQEACD 182 ++++++L E + P + I++ K+ ++ QS +G + ++Y YQ Sbjct: 123 IVRSLDLSEDAYQPANVLKIISNAKNSLVSVKKMREQSRFG--FMKNVAEIYAHYQSYLK 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + ++DF +L+L+ L+ P +L Y+ +F I VDE+QDTN IQY I++L+ Sbjct: 181 KNSVLDFDDLMLKTIVLFKKFPEVLAIYQNQFQYIHVDEYQDTNVIQYRLIKMLSAVHKN 240 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 V +VGDDDQSIY WRGA +NI F DF E + L+QNYRS S IL AANA+I+NN Sbjct: 241 VCVVGDDDQSIYSWRGACSDNIINFEKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTD 300 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R K+LW++ G IS+Y A N+ DE + +I + G + AILYR+N SR Sbjct: 301 RKEKELWSENKGGGKISVYAASNDKDETDDIAKKILELKKEGIDYKDIAILYRANYLSRQ 360 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E + L +PY++ G ++F +RQE++D L+YL +I NR D+ + R++N P RG+G + Sbjct: 361 MENSCLSFGIPYKLIGSLKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVPKRGVGASS 420 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 +D + + + ++L++A + + + ++ + + ++ LI+ + E + Sbjct: 421 MDKIDKYAEQYGISLFEALKNI-EAIGVSKKIVTNIKLLTNLIEKYS-EVERYAIDELII 478 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + KDSG TM ++ ++RIEN+ ELV++ +QFS + L F+S +L Sbjct: 479 GIYKDSGYETMLKESNDPYAESRIENISELVSSAKQFSSMND-----SLIDFISEMSL-T 532 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS----QMSLDEGGRLEEERRL 598 + + +DAV L T+H++KGLE+ VFI+G+EE +FPS + S DE ++EEERRL Sbjct: 533 SDSDDENQEDAVVLSTVHASKGLEYKVVFIMGLEENLFPSIRDAESSADEKNKMEEERRL 592 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-EVRLRATVSRPVSHQ 657 AYV +TRA ++L ++YA R +G ++ SRF+ E+P + + E + S+ Sbjct: 593 AYVAITRAKERLFMSYANRRMQFGSIKMNKRSRFLDEVPNKLMHFESSFGGSFESTDSNI 652 Query: 658 RMGTPMVEN---------------DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 + + Y +G V H KFG+G ++N+ ++V F Sbjct: 653 EQANKFISKLSPKIKISEKPKSSVSTNYSVGDTVLHKKFGDGKVLNISKDS----VKVEF 708 Query: 703 QGQGIKWLVAAYARL 717 G+K L+ YA L Sbjct: 709 SEVGVKTLLIEYANL 723 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 283/721 (39%), Positives = 409/721 (56%), Gaps = 35/721 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LN++Q+EAVA +VLAGAGSGKTRVL RI L+ + P+ IMA+TFTNK Sbjct: 4 IFADLNEQQKEAVAHVDGPCMVLAGAGSGKTRVLTRRIVHLVK-QGIPPHRIMAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ ++ W+ TFH +R+LR + + F I+D + L+K Sbjct: 63 AAQEMRSRVISML-PDFNSQWIQTFHSTCNRILRMDIQELGFDKYFSIIDDTEAKSLIKT 121 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGL-RPH-HIQSYGNP--VEQTWQKVYQAYQEAC 181 L++ N E + + + YI Q L +P + S+ P +++ +V+ Y Sbjct: 122 LLREENDYETKA---EELLYIFKQAKNSLEKPEKYFYSFAVPDFIKERNCRVFSLYNSRL 178 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 ++DF +L++ L+ P +L+ Y+ F I+VDE+QDTN QY W RLLA Sbjct: 179 KNLNVLDFEDLIVLCIRLFQQNPDVLEKYQGWFQYIMVDEYQDTNYSQYFWARLLASRHH 238 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIY WRGA+ NI+RFL D+P + I+LE NYRS+ NILSAANA+I NN Sbjct: 239 NIFVVGDPDQSIYSWRGAEPYNIKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICNNE 298 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 R K+L+T GE + +CA + EARF+ + I + + + A+ YR++AQS Sbjct: 299 EREEKQLYTQKGQGEKLVHFCAGDSFQEARFIADEINQLLRSENRHFQDFAVFYRTHAQS 358 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEALL ++PY I G +F+ER+EIKD L+YLRL++N ND +FERV+N P RGIG+ Sbjct: 359 RALEEALLYRNIPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVPRRGIGE 418 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ-ETADMPLHV 479 +TL ++ S +R ++L E + + +A++ F ++ L T+ L Sbjct: 419 KTLGRIKAYSEERGISLLDVLAEAESIPGIGRKMLTAMEDFYGMLKYLTDLVTSGASLME 478 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++VI+ +G ++ K + RIENL+EL + +F E E L+ FLS A Sbjct: 479 LLEQVIEVTGYIEELKKSKATDAEARIENLQELRSLVVEF----EREGGQGLEEFLSQTA 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + D D V LMTLH AKGLEFP VFI G+EEG+FPS S +EEERRL Sbjct: 535 LVQESDELDN-SDHVLLMTLHGAKGLEFPVVFITGLEEGVFPSYRS-QTAEEMEEERRLC 592 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRA ++L L++A +R LYG E + PSRF+ E+PEE + + + V++PV Sbjct: 593 YVGITRAQERLYLSHALSRLLYGYERSNPPSRFLYEIPEELLLSPQ-QKKVAKPV----- 646 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 ++ G RV HAKFG G I + + E V F G + L A LE Sbjct: 647 ----------FQAGDRVLHAKFGMGIISEL--NEEEQIAVVEFVQAGTRMLRLDIAPLEK 694 Query: 720 V 720 + Sbjct: 695 I 695 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 264/679 (38%), Positives = 391/679 (57%), Gaps = 47/679 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWL----------------------- 46 LN QR+AV LL+LAGAGSGKT VLV+RIA + Sbjct: 23 LNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFGSAHGSKELPRTVTQQDLED 82 Query: 47 -----------------MSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGG-MWVG 88 ++V P++++A+TFTNKAA E++ R+ ++G + GG + Sbjct: 83 LRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGELKERLRAMLGETMGGDVNAS 142 Query: 89 TFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINS 148 TFH R+LR P+ F I DS+DQ R+LK++ K +D+K P + A+ I+S Sbjct: 143 TFHSACVRILRRDAERIGFPKSFTIYDSDDQQRVLKQIYKDKMIDDKFLPIKSAVSQISS 202 Query: 149 QKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHI 206 KD+ + P + ++ + K+Y Y AG +DF +L+ L Sbjct: 203 YKDKLMSPEDVAAETPRDTKAALISKIYTTYAGRLKTAGAMDFDDLIYHTVRLLQTDAEA 262 Query: 207 LQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQR 266 ++Y+ +F ++VDE+QDT+ Q+ +RLLAG T V +VGDDDQSIY +RGA +ENI Sbjct: 263 REYYQNKFRYVVVDEYQDTSIAQFHLVRLLAGGTNNVCVVGDDDQSIYKFRGATIENILN 322 Query: 267 FLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNE 326 F F GA+TIRLEQNYRSTSNIL+AAN++I+NN GR GK LWT+ DG+ + Y A +E Sbjct: 323 FEQVFTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAASE 382 Query: 327 LDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQ 386 DEA + + I G L + A+LYR NAQS +E +A +PYRI GG RFF+R+ Sbjct: 383 QDEASHIADVIGEHLREGAHLRDHAVLYRMNAQSNPIETYFARAGIPYRIVGGQRFFDRK 442 Query: 387 EIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ 446 E+KD SYL +I N DD R++N P R IG T+D V + + + + + Q ++ Q Sbjct: 443 EVKDINSYLAVIVNPRDDVRLRRIINEPARKIGASTVDKVGELAARQGVPMLQIIADVRQ 502 Query: 447 EKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 L RAA++L++F E+ L + +PL VIK +G M + +K E+G+TR+ Sbjct: 503 YPELT-RAAASLEKFYEMYRELCDLSVTIPLDEFAGEVIKKTGYEAMLKAQK-EEGETRL 560 Query: 507 ENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLE 566 ENL +LV++ + +Y +++ + L FL AL + D D+V +MT+HSAKGLE Sbjct: 561 ENLGQLVSSVK--TYADQNGEDATLSGFLEEVALISDLDSYDQDADSVTMMTIHSAKGLE 618 Query: 567 FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY 626 FP VF+VGME+G+FP M+ +EEERRL YV +TRA ++L L+ + +R ++G+ Sbjct: 619 FPYVFVVGMEDGIFPGDMARYNEEDMEEERRLCYVAITRAKKELYLSTSRSRLIFGQTRR 678 Query: 627 HRPSRFIGELPEECVEEVR 645 + PS F+ E+ +EE + Sbjct: 679 NLPSCFLSEIDPGLMEETQ 697 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 260/648 (40%), Positives = 392/648 (60%), Gaps = 20/648 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S L++LN+ Q+EAV LL++AGAGSGKT+VL RIA +++ + P I++VTFT Sbjct: 4 SEYLNNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSVTFT 63 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM++R+ ++ + G+ W+GTFH + +LLR H A L +F I+D++DQ+RL Sbjct: 64 NKAAKEMQNRVSSILNSEAIGLSWLGTFHSICAKLLRKHAPAAGLTSNFTIIDTDDQVRL 123 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEAC 181 +K + KA N+D KQ P+ + I+ K++G P + N + E+T + +Y+ YQ+ Sbjct: 124 IKNICKAENIDIKQLAPKFILSIIDRWKNKGFHPDEVVINKNDIFERTIRPLYKIYQQKL 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQH-YRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +L+L ++ L K H +++ Y F ILVDE+QDTN IQ W+ LL+ Sbjct: 184 LDLNACDFGDLILHVVKI-LEKNHDIRNIYSNNFKYILVDEYQDTNYIQSRWLNLLSEKH 242 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIY WRGA+++N F + ++ IRLE+NYRS+ NILS A+ LI NN Sbjct: 243 KNLCCVGDDDQSIYSWRGAEIKNFLEFDQVYKNSKVIRLEENYRSSQNILSVASNLIANN 302 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R+GK L T +G+ + L C N DEA V + I+ + AIL R+ Q+ Sbjct: 303 QNRVGKTLKTTMEEGDLVKLNCFKNGKDEAIGVSDEIEKKLKKKYSFNNIAILVRAIFQT 362 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R EE L+ +PYRI GG +F+ER EIKD ++YLRLI DD AF+R+VN P R IG+ Sbjct: 363 REFEERFLKIGLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNNPKRAIGE 422 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL-HV 479 T+ ++ + S+ ++L A ++L++E + + L F+ L+D + + HV Sbjct: 423 STIKLIHEFSKTNAVSLEIASKKLIEENLIKPKTKIGLSSFLFLMDKWRNDINIKKINHV 482 Query: 480 QTDRVIKD-SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + +++ D SG +M + +K + + R+EN++EL++A + F L+ FL H Sbjct: 483 KLLQLVLDESGYSSMLKNKKDLENENRLENIKELLSAMKDFD---------NLENFLEHV 533 Query: 539 ALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEE 595 AL Q W + V +MT+H +KGLEF VF+ G EEG+FP Q S++E G+ LEEE Sbjct: 534 ALATSVDQ--DWDGEKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKSIEEKGQNGLEEE 591 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 RRLAYVG+TRA +K +++A R G + SRFI ELPE+ +E+ Sbjct: 592 RRLAYVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEKFLEK 639 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 291/720 (40%), Positives = 401/720 (55%), Gaps = 40/720 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL SLN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFTNK Sbjct: 11 LLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTFTNK 70 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ + M G +WV TFH A R+LR + L F + D +DQ LLK Sbjct: 71 AAEEMKARL-KAMVRGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALLKE 129 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQEA 180 ++K + L K P + ++ K++G+ P H+ + Y Q V YQEA Sbjct: 130 VLKELGLAAKPGPIKS---LLDRAKNQGVPPEHLLLELPEFYAGLSRGRLQDVLHRYQEA 186 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 G +DF ++LL A +L +L+ R+R I VDE+QDTN +QY + RLLAG+ Sbjct: 187 LRAQGALDFGDILLYALKLLEEDGEVLKRVRKRARFIHVDEYQDTNPVQYRFTRLLAGEE 246 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 +M VGD DQ IY +R A + NI F D+P A RLE NYRST IL ANA+I N Sbjct: 247 ANLMAVGDPDQGIYSFRAADIRNILDFTQDYPKARVYRLEDNYRSTEAILRFANAVIVKN 306 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RL K L GEP+ L+ A + DEARFV I G A+LYR+NAQS Sbjct: 307 ALRLEKTLRPVKKGGEPVRLFRAESARDEARFVAEEIARL---GPPFDRVAVLYRTNAQS 363 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGIG Sbjct: 364 RLLEQALASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPLDAVSLKRVLNTPPRGIGP 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T++ V+ +R+R L L++A L+ AL L+ F+ L++ L + A P Sbjct: 424 ATVEKVQAIARERGLPLFEA----LKVAALTLPRPEPLRAFLALMEEL-MDLAFGPAEAF 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++ + ++ E + R+EN+EEL+ A + E E LM FL AL Sbjct: 479 FRHLLLATDYPAYLKEAYPEDAEDRLENVEELLRAAK------EAESLM---DFLDKVAL 529 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + SL LEEERRL Y Sbjct: 530 TARAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSSLSTQEGLEEERRLFY 589 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE---ECVEEVRLRATVSRPVSHQ 657 VGVTRA ++L L+YA+ R +YG+ RPSRF+ E+ E E + R + P H+ Sbjct: 590 VGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEVYDPYRQSSRKPTPPPHR 649 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + ++ G++V H +FG GT+V G + V F+G G+K L YA L Sbjct: 650 AL-------PGAFRGGEKVVHPRFGPGTVVAAAG----DEVTVHFEGVGLKRLSLKYADL 698 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust. Identities = 275/691 (39%), Positives = 395/691 (57%), Gaps = 52/691 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN++Q +AV LL+ AGAGSGKTRVL RIAW+++ P ++A+TFTNK Sbjct: 47 LIGDLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFGAWPSQVLAITFTNK 106 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+G L+G MWV TFH R+LR L F I D+ D RL+K Sbjct: 107 AAAEMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGFTIYDTADCERLIKL 166 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDE-----------------GLRPHHIQSYGNPVEQ 168 + N+D K++ PR + I+ K++ G+R + G+P E Sbjct: 167 VCADFNIDIKRFTPRSILARISDYKNQLTDASTALAQYAPDFKPGMRHYSFGQIGDP-EP 225 Query: 169 TWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNI 228 + VY YQ A VDF +L++R EL +PH+ ++YR +F ILVDE+QDTN+ Sbjct: 226 VYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVAEYYRHKFRYILVDEYQDTNHA 285 Query: 229 QYAWIRLLAG------------DTGK-----VMIVGDDDQSIYGWRGAQVENIQRFLNDF 271 QY +R LAG + GK V +VGD DQSIY +RGA + NIQ F DF Sbjct: 286 QYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSDQSIYAFRGADIRNIQDFEKDF 345 Query: 272 PGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEAR 331 P A TI LEQNYRST IL AANA+I +N+ R KKLWT +G+ I Y A EA Sbjct: 346 PDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKIIGYAADTAQLEAH 405 Query: 332 FVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKD 390 ++ +I ++ G ++ AI+YR+NAQSR LEE L+QA +PY++ GG +F+ER+E+KD Sbjct: 406 WIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQAHIPYQLIGGTKFYERREVKD 465 Query: 391 ALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL 450 A++YL+ I N DD R++N P RG+G R + + + T W A +L + + Sbjct: 466 AIAYLQAIVNPADDINMRRILNVPKRGLGTRAESQLTLFANEHNQTFWWAIEQLEDIEGM 525 Query: 451 AGRAASALQRFMELIDAL---AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIE 507 + R A+A++ F EL+ +L A E P + +V++ S + + + + + ++R+E Sbjct: 526 SARTANAVRAFRELMTSLRTFAGEHDSKPSEI-VAQVLEQSHMLELLRKSEDPQDESRVE 584 Query: 508 NLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA------GEGQADTWQDAVQLMTLHS 561 NL +L + +F N D L FL AL A GEG D+ + V LMTLH+ Sbjct: 585 NLSQLQSVAAEFEQNTPD---TTLAGFLETTALVADSDQLPGEGH-DSGK--VTLMTLHT 638 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 AKGLE+P VF+ GME+G FP +++ L EERRLAYVG+TRA ++L LT A R + Sbjct: 639 AKGLEYPIVFLTGMEQGTFPHSRAMENMDELSEERRLAYVGITRAKRRLYLTRAAVRAQW 698 Query: 622 GKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 G++ PS+F+ E+P+ ++ R A + R Sbjct: 699 GRQSEMMPSQFLDEIPDSLIDWKRREAGMER 729 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 270/701 (38%), Positives = 388/701 (55%), Gaps = 58/701 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN +Q +AV LL+ AGAGSGKTRVL RIAW+++ P I+A+TFTNK Sbjct: 100 LLEGLNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANRKAWPSQILAITFTNK 159 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+ L+G S MWV TFH ++LRAH L F I DS D RL+K Sbjct: 160 AAAEMRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSGFSIYDSSDCERLVKI 219 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKD------EGLRPH--------------HIQSYGNP 165 + +N+D K++ P+ + I+ K+ E L+ + + GN Sbjct: 220 IASELNIDIKKFTPKLLLSKISDFKNNLVTWQENLKNYAPDYKPGASVSGASSFNAAGN- 278 Query: 166 VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDT 225 + + VY YQ + VDF +L++ +L P + +Y+ +F ILVDE+QDT Sbjct: 279 ADALYAAVYAEYQNRLSVSNAVDFDDLIMLTVKLLRQNPQVSAYYKRKFRYILVDEYQDT 338 Query: 226 NNIQYAWIRLLAG--DTG-----------------------KVMIVGDDDQSIYGWRGAQ 260 N+ QY IR LAG D G + +VGD DQSIY +RGA Sbjct: 339 NHAQYVLIRELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQSSITVVGDSDQSIYAFRGAD 398 Query: 261 VENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISL 320 + NIQ F DFP A TI LEQNYRST IL AANA+I NN R KKLWT G PI Sbjct: 399 IRNIQDFEQDFPSATTIMLEQNYRSTQTILDAANAVISNNANRKPKKLWTSLGKGSPIVG 458 Query: 321 YCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGG 379 Y A N EA +V I + ++G ++ AI+YR+N+QSR LE+AL+++ +PY++ GG Sbjct: 459 YVADNAQGEASWVAQEIARLAGEDGVNYSDIAIMYRANSQSRSLEDALIKSGLPYQLVGG 518 Query: 380 MRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQ 439 +F+ER+E+KDAL+YL+ IAN +DD R++N P RG+G R + +++ ++ W Sbjct: 519 TKFYERREVKDALAYLQSIANPDDDVNMRRILNVPKRGLGARAESQITSYAKENSISFWS 578 Query: 440 ACRE---LLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQTDRVIKDSGLRTMY 494 A + + ++ ++ R +AL+ F +L+ +L + D + V+ +SGL Sbjct: 579 ALSQIDKIAEQIGISSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLNESGLLQDL 638 Query: 495 EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ-ADTWQDA 553 + K + + R++NL +L + ++ N D ++ FL AL A Q D +D Sbjct: 639 RESKDPQDEFRVDNLSQLQSVAAEYEQNTPDANVA---GFLETTALVADSDQLPDQGEDT 695 Query: 554 --VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLT 611 V LMTLH+AKGLE+P VF+ GME+G FP +D L EERRLAYVG+TRA + L Sbjct: 696 GKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRCVDNQKELCEERRLAYVGITRAKKILY 755 Query: 612 LTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 +T+A R +GK S+F+ E+P + + R A V R Sbjct: 756 VTWAAERSQWGKSAEMIQSQFLDEIPADLISWKRKEADVMR 796 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 271/643 (42%), Positives = 385/643 (59%), Gaps = 21/643 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN QR+AV L+VLAGAG+GKTRVLV+RIA ++ P I+AVTFTNKAA E Sbjct: 7 LNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVD-RGVPPRDILAVTFTNKAAKE 65 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R+ +L+G + MW+GTFH +LLR H L +DF I DS+DQ RLL LIK Sbjct: 66 MRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDFTIFDSDDQKRLLNALIKE 125 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 L E Q + I+ K P + +G + +++Y YQ + G VDF Sbjct: 126 HGL-EDQVSAKTLAVQIDRCKSRDEDP--MDRHGGWGDDLLREIYPLYQAGMAQQGAVDF 182 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +LLL+ EL + P + RF ++LVDEFQDTN +Q+ +R A + + +VGDD Sbjct: 183 NDLLLKVLELARD-PTVGPVLSARFDHVLVDEFQDTNRVQFRLVRHFADVSRNLTVVGDD 241 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIY WRGA+ N+ F D+P AE ++LEQNYRSTS IL AANA+I N R K LW Sbjct: 242 DQSIYSWRGAEPRNLLEFKRDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKALW 301 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVLEEALL 368 T GE I ++ +EA F+ I+ ++ AILYR+ AQSR LEE L Sbjct: 302 TASDGGESILWEPCPSDREEATFIARAIRGLVSAENRDFSDMAILYRTRAQSRQLEEQLR 361 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 + + Y I G + FF+R+E+KD +SYLRL+ N D AFER+VN P RGIG T++ VR Sbjct: 362 RFDIHYEIIGDVSFFQRREVKDIISYLRLLVQPNADLAFERIVNVPARGIGKTTVERVRD 421 Query: 429 TSRDRQLTLWQACRELLQEK--ALAGRAASALQRFMELIDAL----AQETADMPLHVQTD 482 +R +L L++A R +LA RA + L+ F++++D L A + + +QT Sbjct: 422 YARRAELPLFEAARACADGSGGSLAARARNKLRAFLDIVDGLRDVMAAGASVAEIVIQT- 480 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 ++ SG +E + + R++NL ELV+ S++EE+ + L FL++ AL++ Sbjct: 481 --VERSGYSAALTKEGTLEAEERLKNLSELVSWGS--SFDEEEGEDASLVEFLANVALQS 536 Query: 543 GEGQADTW-QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLEEERRL 598 +A++ + V++MT+H+AKGLEFP VF+ G+EEG+FPS D +G LEEE RL Sbjct: 537 SGDKAESGDRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPSLRERDDQNDGDTLEEEYRL 596 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 AYV +TRA ++L LTYA R ++G+ RPSRF+ +P++C+ Sbjct: 597 AYVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCL 639 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 267/712 (37%), Positives = 407/712 (57%), Gaps = 24/712 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +DV+ +L LN +QR+AV LLV+AGAGSGKT VL RIA+L++ + + I+A+ Sbjct: 2 LDVTDILRGLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAI 61 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G +W+GTFH + R+LR +F ILDSEDQ Sbjct: 62 TFTNKAAREMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQE 121 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 L+++ + + D K R I+ K+EG + + NP + +V + Y + Sbjct: 122 ALVQQCLLDLGYDLKTHDARSIKHRISQWKNEG--ATRVVNESNPSDLIADRVMELYNKR 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +L+ L + Y+E+F ++LVDE+QDTN IQ+ +RLL Sbjct: 180 LFAANAMDFDDLIGHTVRLLEQNDDLRDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKH 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGD DQ+IY WRGA E++ RF DFP A+ + L +NYRST IL AAN++I +N Sbjct: 240 RNLCAVGDADQAIYAWRGADSEHMLRFERDFPDAKIVVLTRNYRSTQEILDAANSVIAHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+L + G+ + + EA +V I+ NGG +CA+LYR+NAQS Sbjct: 300 PRRRPKELRSTRGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRNGGRYEDCAVLYRANAQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EE LL+ ++PY + GGM F++R+E+KD L+YLR++ N D+ + R++N P RG+GD Sbjct: 360 RAIEEKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRPKRGLGD 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +D + + + ++L++A +E L+ R A A ++F + LA M + Sbjct: 420 TAVDRLLEFAHAEGMSLYEALAH-GEEAGLSERTAEAARQFHASLQELALWMEGMAVSEF 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 V+ + R MY + ++ R+EN++EL + TR F ++ + FL+ +L Sbjct: 479 LAEVLHATRYREMYLESGKKEDLARVENIDELFSVTRSF----DERRGGTVAEFLAEVSL 534 Query: 541 EAG-EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 + + + D + +V+LMTLH++KGLEFP VF+VGMEEG+FP S+D+ R+EEER L Sbjct: 535 LSDIDKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMDDPLRIEEERNLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRAM +L LT+A R LYG+ V PSRF+ E+ E+ V V L + V Sbjct: 595 YVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAEALEPEV----- 649 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWL 710 + G RV H + G+G ++++E R+QV F G+KW+ Sbjct: 650 ----------LRPGDRVVHPQHGQGIVLSVESHAGEERVQVMFHPSIGMKWV 691 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 262/674 (38%), Positives = 377/674 (55%), Gaps = 48/674 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN +QREAV LL++AGAGSGKTRVL HRIA L+ P I+A+TFTNK Sbjct: 34 LLEGLNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFTNK 93 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+ L+G + GMW+ TFH R+LR Q+F I DS D L+KR Sbjct: 94 AAAEMRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLIKR 153 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDE---GLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +IK ++ D + I+ K+E ++ +P E + ++++ Y + Sbjct: 154 IIKQLDADTLGFTVSSVSGRISKLKNELSDADTFARTANFNDPAEAMFVEIFRQYTRSLA 213 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---- 238 A DF +L+ + L+ P + Y+ RF ++LVDE+QDTN+ QY+ IR L Sbjct: 214 SANAFDFDDLIGQTVYLFRAFPKVAALYQRRFRHVLVDEYQDTNHAQYSLIRELTRAVAP 273 Query: 239 -----------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 D + +VGD DQSIY +RGA + NI F DFP ++ + LEQ Sbjct: 274 EDVPVDTRMSTNGMGGIDGASLTVVGDSDQSIYAFRGADIRNITEFERDFPQSKVVLLEQ 333 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ 341 NYRST NIL+AANA+I NN R KKLWT DG+ I + ++ DEA+FV + I+ Sbjct: 334 NYRSTQNILTAANAVISNNFDRKDKKLWTSIGDGDKIVGFTGYSGHDEAQFVADEIQKLH 393 Query: 342 DNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANR 401 + G A +E A+ YR+NAQ+R LEE L+++++PYRI GG +F+ER EIKDA++YL +AN Sbjct: 394 EEGTAYSEIAVFYRTNAQTRALEEILIRSAVPYRIMGGTKFYERAEIKDAMAYLVAVANP 453 Query: 402 NDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRF 461 D A R++NTP RGIG T + + +T +A R E L + A+ Sbjct: 454 ADVLALRRILNTPKRGIGPATETALANFAESHGVTFREAMRR-ASELGLGPKVTQAILAL 512 Query: 462 MELIDALAQETADMPLHVQTDR-------------VIKDSGLRTMYEQEKGEKGQTRIEN 508 ++D +A L + DR +++ SGL K + + R EN Sbjct: 513 SRMLDEVA-------LLLDPDRPEGRTSVGDLVTTLLEKSGLVQALRASKDAQDEARAEN 565 Query: 509 LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFP 568 +EELV T++FS N + L+ FL+ +L A + D V LMTLH+AKGLE+ Sbjct: 566 VEELVAVTKEFSRNNPEGQLVD---FLTEVSLVAAADELDDSSGTVSLMTLHTAKGLEYD 622 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VF+ G+EE + P +MS +E G EERRL YVG+TRA ++L ++ A TR +G+ Sbjct: 623 SVFLTGVEEDLLPHRMSANEPGGPAEERRLFYVGITRARRRLFISLAMTRAQFGEVNVAM 682 Query: 629 PSRFIGELPEECVE 642 PSR++ E+P E ++ Sbjct: 683 PSRYLQEIPAELID 696 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 290/754 (38%), Positives = 412/754 (54%), Gaps = 51/754 (6%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 +V LLD LN +QR+AV S LL++AGAGSGKT VL RIA+L++ + I+A+T Sbjct: 13 EVDRLLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAIT 72 Query: 62 FTNKAAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAH-HMDANLPQDFQILDSEDQ 119 FTNKAAAEMR R+ +L+G G MWV TFH R+LR + L +F I D +D Sbjct: 73 FTNKAAAEMRERVARLVGDHTGPSMWVSTFHSTCVRILRNQASLIGGLNSNFSIYDVDDS 132 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH----HIQSYGNPVEQTWQKVYQ 175 LL+ + + M LD K++ PR I++ K+E + ++ S + + +T VY Sbjct: 133 RSLLQMIGQDMGLDIKRYSPRLMANAISNLKNELIDAESAVANLSSDTDDLARTVATVYG 192 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ A +DF +L+ + P I +HYR RF ++LVDE+QDTN+ QY +R Sbjct: 193 EYQRRLRTANALDFDDLIGETVGILQAFPQIAEHYRRRFRHVLVDEYQDTNHAQYVLVRE 252 Query: 236 LAG----------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 L G G++ +VGD DQSIY +RG+ + NI+ F D+P TI LEQNYRS Sbjct: 253 LVGHGARNSPDDMPPGELCVVGDADQSIYAFRGSTISNIEDFERDYPDTTTILLEQNYRS 312 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T NILSAAN++I N GR K+LWTD GE I Y + NE DEA+F+ + I GG Sbjct: 313 TQNILSAANSVIARNFGRRDKRLWTDAGKGELIVGYVSDNEHDEAKFIADEIDALV-GGG 371 Query: 346 ALA--ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND 403 + + A+LYR+N SR LEE + +PY++ GG F+E +EI+D ++YLR++ N D Sbjct: 372 EITYDDVAVLYRANNLSRSLEEVFIPTGIPYKVVGGFCFYESKEIRDLIAYLRVLDNPGD 431 Query: 404 DAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRF 461 + R++NTP RGIGDR V + + + A + + + K L R+ A+ F Sbjct: 432 AVSMRRILNTPRRGIGDRAEACVSVYAENTGTSFADALQAVAEGKVPMLNTRSVKAIAGF 491 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS- 520 + L+D L D L + V++ SG E + R++NL ELV+ +FS Sbjct: 492 VALLDDLRCRVDD-DLGELVESVLERSGYLRELESSTDPQELARLDNLNELVSFAHEFST 550 Query: 521 ------------YNEEDEDLM---PLQAFLSHAALEAGEGQ-ADTWQDAVQLMTLHSAKG 564 + EDED+ L AFL +L + Q + V LMTLH+AKG Sbjct: 551 EQANAAALAKSLHTPEDEDVPDTGALAAFLEKVSLMSDTDQIPENNSGVVTLMTLHAAKG 610 Query: 565 LEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE 624 LEFP VF+ G E+GM P +L + L EERRLAYVG+TRA Q+L L+ A TR +G+ Sbjct: 611 LEFPVVFVTGWEDGMLPHMRTLGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWGQP 670 Query: 625 VYHRPSRFIGELPEECVEEVR--LRATVSRPVS-HQRMG----TPMVENDSGYKL----- 672 + + SRF+ E+P E ++ R L + S P S R G + + S L Sbjct: 671 ILNPESRFLREIPPELIDWRRSILTDSYSTPASGASRFGRVRPSSIRSGASKRALLVLAP 730 Query: 673 GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 G RV H K+G G + + G GE + + F G Sbjct: 731 GDRVTHDKYGLGRVEEVSGVGESAISLIDFGSSG 764 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 254/635 (40%), Positives = 378/635 (59%), Gaps = 23/635 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+QR AV +L+LAGAG+GKT+ LVHRIA L+ P IMAVTF NKAA Sbjct: 15 NLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMAVTFANKAAN 74 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ +++G + W+GTFH A ++LR DF ILD +DQ+R+L+++ + Sbjct: 75 EMIQRVNEIVGEMKFH-WIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQVRMLQKVAQ 133 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK----VYQAYQEACDRA 184 ++ + ++ + I++ KD+ P ++ + N ++K VY YQ+ Sbjct: 134 EKKIEADKALLKKYLSVISAWKDKAFTPSRVR-FNNAANTWFEKQALSVYDTYQKKLKEN 192 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL+ L+ L+ Y+E+F I+VDE+QDTN QY W+RLLA + Sbjct: 193 NSMDFGDLLMHNVTLFNKDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNIC 252 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIYGWRGA+V NI RF DF GA+ I+LEQNYRST+ IL+AA+ +I+NN RL Sbjct: 253 CVGDDDQSIYGWRGAEVGNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRL 312 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 KKLWT GE I ++ + EAR ++ IK + ++ AIL R+ Q+R E Sbjct: 313 TKKLWTAYPGGEEIQIFTYMDSEQEARAIIRMIKE-RKLLCRYSDTAILVRAGFQTRAFE 371 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 EA + ++PYR+ GG++F+ER+EI+D ++YLRL+ N ND+ AFER++NTP RG+G +L+ Sbjct: 372 EAAIHENVPYRVVGGLKFYERKEIRDIIAYLRLVVNPNDNLAFERIINTPKRGLGQASLN 431 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + S + ++++A R+L + + L ++AL F++ + +E+ + LH ++ Sbjct: 432 KIYNYSLEEGCSMFEAVRKLEENEKL---KSTALLTFVKQVRKWQEESLNHSLHDLLKKI 488 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 +SG Y E+ +TRIEN++EL ++F FL H +L Sbjct: 489 TLESG----YISALKEQDETRIENVDELFRVIQEFD---------DATDFLQHVSLLTES 535 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 DAV +MTLH++KGLEF QVF+ G E+G FP SL ++EEERRLAYVG+T Sbjct: 536 DAQINNSDAVNMMTLHASKGLEFEQVFLPGWEDGTFPHVRSLCSTEQIEEERRLAYVGIT 595 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 RA + LT+T A R + SRF+ EL E+ Sbjct: 596 RAKRFLTITSAHRRLIRNSWQNTVKSRFMLELAEK 630 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 453 bits (1166), Expect = e-126, Method: Compositional matrix adjust. Identities = 263/663 (39%), Positives = 376/663 (56%), Gaps = 26/663 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 + LN+ Q A + LL+ AGAGSGKTRV+V+RIA L+ PY I+AVTFTNKAA Sbjct: 22 EELNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTNKAA 81 Query: 68 AEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EM+ R+ L+G +WVGTFH + RLLR HH A L ++F I D +DQ ++ R+ Sbjct: 82 TEMKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHEAAGLDKNFIIYDDDDQRAVMNRV 141 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 +K +NLD++++PPRQ + I+++K EG P + G + + ++AY+ A Sbjct: 142 LKELNLDDRRYPPRQVLSRIHAEKQEGRGPAEFERKGY-FDDAIARCFEAYERHLKAASA 200 Query: 187 VDFAELLLRAHELWLNK-PHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF +LLL + + + + R RF ++LVDEFQD N +QY +R + + Sbjct: 201 VDFDDLLLAVLRIAEDPTSYAGEDLRGRFRHVLVDEFQDVNQVQYRLVRAFCKSHDNLCV 260 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA V ++ F DFP A ++LEQNYRS +++ A +I + + R Sbjct: 261 VGDDDQSIYRWRGADVRIVRGFRRDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREP 320 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+LWT DG PI + A +E DEA +VV ++ G + E A+ YR +AQSRVLEE Sbjct: 321 KELWTANQDGAPIDVVAADSEHDEAAWVVECVRELIAEGVSPNEIAVFYRIHAQSRVLEE 380 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L +A +PY+I GG RFFER E+K+ LSYLR+IAN D R++N P R IG T+D Sbjct: 381 VLREARIPYQIIGGTRFFERAEVKNLLSYLRVIANPKSDVDLNRIINVPARKIGQSTVDK 440 Query: 426 VRQTSRDRQLTLWQACRELL------------QEKALAGRAASALQRFMELIDALAQETA 473 + Q + ++L++A LL Q LA A +L F +LI L E Sbjct: 441 LIQAADLLGVSLFEAIDPLLEGRVPPSAMPGGQLPPLASAAKRSLLGFRDLIHGLMTEAK 500 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE---DLMP 530 + V+ SG EQE + + R++NL ELV + Y +E D Sbjct: 501 SASPSALAEEVLARSGYAKALEQEDSVESEARLQNLRELVQSL--VDYEQEATAAGDEAT 558 Query: 531 LQAFLSHAALEAGEGQADTWQDA--VQLMTLHSAKGLEFPQVFIVGMEEGMFP-SQMSLD 587 L +L +L + D D V +MT+H+AKGLEF VF+ GMEE +FP + Sbjct: 559 LAGYLERVSLVS---DVDALADVPKVAMMTIHAAKGLEFHAVFLTGMEEDLFPFRSQDPN 615 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR 647 G +EEERRLAYV +TRA ++L +T+A R ++G+ Y PSRF+ +LP V + Sbjct: 616 RKGDIEEERRLAYVAITRARERLWITHAARRAIFGQTRYGLPSRFLADLPPASVRPIATP 675 Query: 648 ATV 650 A++ Sbjct: 676 ASM 678 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 288/731 (39%), Positives = 418/731 (57%), Gaps = 42/731 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN QREAV+AP +LVLAGAGSGKTRVL R+AWL++ P SI+A+TFTNK Sbjct: 5 LLEDLNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAAGE-RPSSILAITFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ L+G + G+WV TFH R+LR H L + I D +D RLL+R Sbjct: 64 AAGEMAERVRSLVGPNADGLWVSTFHAACARMLRLHPELGGLRSGWSIYDQDDARRLLER 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRA 184 I+ ++LD K++PPR ++ K + P + E+ VY++YQ A A Sbjct: 124 TIRRLDLDTKRFPPRAIAQQVSLAKARLVDPERFTDEAEGLYERQVAMVYRSYQAALAEA 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +L+ E +P + +H+R RF ++L+DE+QD N Q+A++ L G +G V Sbjct: 184 NAADFDDLIGLVVEGLATRPELAEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSGSVF 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGD DQSIY +RGA + F F GA+ + LEQNYRST+ IL ANA+I N R Sbjct: 244 AVGDVDQSIYAFRGADPSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNRRRY 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVL 363 K L+++ +G P Y A +E DEAR+V ++ + GG +E A+++R+NAQSR L Sbjct: 304 AKHLFSELGEGTPARRYQATDERDEARWVAATVREFLQRGGVDPSEIAVIFRTNAQSRPL 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEA +A +P+R+ GG+RF+ER+E++D L+YLR++AN +DD A R++N P RGIG T Sbjct: 364 EEAFSEAGIPFRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVPRRGIGRGTE 423 Query: 424 DVVRQTSRDRQLTLWQACR-ELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT- 481 + ++ + R ++ R E ++ L R AL+ F+ELID L A LH + Sbjct: 424 EALQAAAALRGRSMLSLLRAEGVEVLGLTSRQERALRGFVELIDRLG---ALASLHRPSE 480 Query: 482 --DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 D V+ ++ +E + R+EN+ EL + S E D+ L++FL AA Sbjct: 481 LIDAVVAETSYLEHLNEEDPITLEGRLENIAEL-----RASAAEADD----LESFLERAA 531 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + + V L+T H+AKGLEF V +VG+EEG+FP ++ + +EEERRL Sbjct: 532 LVSAVDEV-MGASGVTLLTAHAAKGLEFDVVVVVGLEEGVFPHVRAIVDAEAVEEERRLF 590 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA L LT A R +G+ +Y+ PSRF+ ELP + V AT + PV+ + Sbjct: 591 YVAMTRARTTLVLTSARRRASWGEPLYNPPSRFLDELPADLV------ATTAAPVA---V 641 Query: 660 GTPMVEN-------------DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 GT E+ S + +G RV HA++GEGTI + G L +AF G G Sbjct: 642 GTACAESIQRASAVVEARAARSEWVVGDRVFHARYGEGTIRRVVPRGVDDELVIAFHGAG 701 Query: 707 IKWLVAAYARL 717 + A+ +L Sbjct: 702 ERRFFASMVKL 712 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 282/739 (38%), Positives = 405/739 (54%), Gaps = 26/739 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 + S LL LN Q +A LV+AGAGSGKTR LV+RIA L+ P I+AV Sbjct: 4 LPASSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILAV 63 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R L+ + +W+ TFH R+LRA+ L + F I D +DQL Sbjct: 64 TFTNKAAAEMRERARHLVEGADR-LWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDDQL 122 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKVYQ 175 +LK ++ ++ + PR ++ K L P + + P + + Y+ Sbjct: 123 DILKEIMGSIPGIGAETHPRVLRGILDRAKSNLLTPADLARHPEPFISGLPREVAAEAYR 182 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+ +DF +L+ L+ P +L+ ++R I VDE+QDTN QY RL Sbjct: 183 RYEARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDRARFIHVDEYQDTNKAQYELTRL 242 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA +++VGD DQSIY +RGA ++NI F D+ A+ LEQNYRS++ +L+ AN Sbjct: 243 LASRDRNLLVVGDPDQSIYRFRGADIQNILDFQKDYLDAKVYMLEQNYRSSARVLTIANK 302 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LIENN RL K L DG P+ + A ++ E FV + G ++ A+LYR Sbjct: 303 LIENNAERLEKTLRPVKEDGHPVLFHRATDQRAEGDFVAEWLTRLHAEGMRFSDMAVLYR 362 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSRV+EE+L + +P +I GG+ F++R+EIKD L+Y RL N +DD A R++ P Sbjct: 363 TNAQSRVIEESLRRVQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGRPK 422 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 RGIGD L+ + + +R ++ AC QE + R A F L+ A+++ + Sbjct: 423 RGIGDTALERLMEWARVNGTSILTACAH-AQELNILERGAQKAVEFAGLMHAMSEAADND 481 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE--DLMPLQA 533 VI+ SG + QE G++GQ R+ENLEELV+A ++S E D + A Sbjct: 482 EPGPFLRYVIETSGYLDLLRQE-GQEGQVRLENLEELVSAAEEWSRENEGTIGDFLDDAA 540 Query: 534 FLSHA-ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 LS + + D +DAV LMTLH+AKGLEFP VFIVG EEG+ PS+ +L E G + Sbjct: 541 LLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKNALLEPGGI 600 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP---------EECVEE 643 EEERRL YVG+TRAM++L LT A+ R YGK + SRF+ E+ + +++ Sbjct: 601 EEERRLFYVGITRAMERLFLTAAQNRMQYGKTLATEDSRFLEEIKGGFDTVDAYGQVIDD 660 Query: 644 VRLRATVSRPVSHQRMG-----TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 RP R G +P+ E Y+ G++VRH KFGEG ++ + G G+ + Sbjct: 661 RPKSWKEYRPTESARPGAVKNTSPLTEG-MAYRGGEKVRHPKFGEGQVLAVAGLGDRQEV 719 Query: 699 QVAFQGQGIKWLVAAYARL 717 V F G K L+ +A L Sbjct: 720 TVHFPSAGTKKLLVKFANL 738 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 269/742 (36%), Positives = 412/742 (55%), Gaps = 43/742 (5%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LLD LND QR+AV A ++VLAGAGSGKTRV+ +RIAWL+ S +I+A+TFTN Sbjct: 4 FLLD-LNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTFTN 62 Query: 65 KAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EMRHR+ L+ S GG+W+GTFH + RLLR ++F I D++D L+ Sbjct: 63 KAAGEMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKSLI 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACD 182 ++ + +N+ P I+ K+ + P + S G+ +Q KVY Y Sbjct: 123 RQSMGELNISPDSVPLNTLQGIISRAKNSFILPEEFRRSAGDYNQQIAAKVYDLYTRKLR 182 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL++ EL+ P +L+ ++ F +L+DE+QDTN QY ++L+ Sbjct: 183 ENNALDFDDLLIKPLELFREHPMVLEALQDTFRYLLIDEYQDTNKAQYLAAKMLSAKHRN 242 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY WRGA + NI F +D+ A T +L +NYRST IL AAN++I NN Sbjct: 243 IFVVGDDAQSIYSWRGADISNILNFQDDYTDALTFKLVENYRSTGTILQAANSVIRNNLR 302 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 ++ K+L + + G+P++L A NE EA + I + + + G A+ YR+NAQSR Sbjct: 303 QIKKELVSHRSAGDPLTLIEARNERHEAEKIGEYIHSIRIEKGYEFRSFAVFYRTNAQSR 362 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLE+ + Q +PY+I+G + F++R+EIKDA++YLR + N D + R++N P R IG+ Sbjct: 363 VLEDLMRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPPRKIGET 422 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 ++ +R+ + +TL++A E R ++L+ F LI+AL ++ Sbjct: 423 SIGKLREFAEAEGITLYEAITR-ADEGQFQSRLVNSLKGFSSLIEALRLLAETGTVYAVL 481 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 + + + + ++E + R ENL+EL++ R FS N D+ L FL +L Sbjct: 482 TELFSLTSIPLLLKEENTAESLARHENLQELLSMARDFSDNNPDQG--SLGDFLETISLA 539 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + ++ + V LMT+H++KGLEFP VFI G+EE +FP ++ E +LEEERRL YV Sbjct: 540 SNYDESQDSDNYVSLMTVHASKGLEFPVVFITGLEERLFP--LNCYEPEQLEEERRLFYV 597 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL------------------------- 636 +TRA +K+ L++A+TR LYG+ Y S FI E+ Sbjct: 598 AMTRAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTESGTVLADRKERQGTRNA 657 Query: 637 -PEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEH 695 PE R VS P R +SG + G V HA FG+GT+++++G G Sbjct: 658 VPESGGYRQRPAGAVSAPSQKPR--------ESGLREGSTVHHAVFGQGTVLDVQGRGAG 709 Query: 696 SRLQVAFQGQGIKWLVAAYARL 717 + + F+ G K L+ YA L Sbjct: 710 QKALIRFRNAGEKTLMVQYANL 731 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust. Identities = 279/782 (35%), Positives = 416/782 (53%), Gaps = 80/782 (10%) Query: 11 NDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENC------------------ 52 ND Q++AV +L++AGAGSGKT VL +RIA ++ N Sbjct: 19 NDMQKKAVFRINGAVLIVAGAGSGKTTVLCNRIANMLLFGNAYNSNTVRELSDDDVAFAQ 78 Query: 53 -------------------------SPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWV 87 P++I+AVTFTNKAAAE++ R+ + MG G+W Sbjct: 79 SFLAGEIDNFDAAERLSEIFGEDRVKPWNILAVTFTNKAAAELKERL-ENMGADVDGIWA 137 Query: 88 GTFHGLAHRLLR--AHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWY 145 TFH R+LR + +F I D++DQL+++K ++K N+ +K P+ Sbjct: 138 ATFHSACVRILRQDIEELGMGYKSNFTIYDTDDQLKVIKTVMKEHNISDKAVTPKAVQNL 197 Query: 146 INSQKDEGLRPHHIQSYGNPVEQTWQ-----KVYQAYQEACDRAGLVDFAELLLRAHELW 200 I+ KD+ + P + G +Q +Y YQ + A +DF ++++ +L+ Sbjct: 198 ISRSKDKLITPDKFSTKGKNGSDDYQLSTAKTIYTDYQARLEAANALDFDDIIMLTVKLF 257 Query: 201 LNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQ 260 + P +L H++ RF I+VDE+QDTN QY + LLA +G + +VGD+DQSIY +RGA Sbjct: 258 AHCPDVLSHWQNRFRYIMVDEYQDTNAAQYKLVSLLAEGSGNLCVVGDEDQSIYRFRGAT 317 Query: 261 VENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISL 320 +ENI F F GAE I+LEQNYRST+ IL AANA+I NN K LW+D DG+ I + Sbjct: 318 IENILSFEEQF-GAEVIKLEQNYRSTATILKAANAVIANNTQHKDKNLWSDLGDGDKIRM 376 Query: 321 YCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGM 380 E +EA F+ RI G A+ ILYR+NAQSR +E L ++ +PY+I GG+ Sbjct: 377 DRFSTEQEEAMFITERILDGVKQGKKYADHVILYRNNAQSRTVETTLAKSGIPYKIIGGV 436 Query: 381 RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQA 440 RF+ER+EIKD ++YL ++ N D+ F R+VN P RGIG TLD + + ++ QA Sbjct: 437 RFYERKEIKDIIAYLCVLNNNYDEVRFGRIVNEPVRGIGAATLDELNRVVSGMGISYVQA 496 Query: 441 CRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGE 500 E +L+ R A L E L+Q T D+ D ++ G R Q +G Sbjct: 497 MCESDSLPSLS-RKAKVLVPLGETFSELSQHTDDISDGSLIDDILDRFGYREAM-QRQGL 554 Query: 501 KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLH 560 +G+ R+EN+ EL + ++ +E+E L FL AL + + D LMT+H Sbjct: 555 EGEVRLENINEL--KSNMITFAKENEG-AGLSEFLEQVALVSDMDSFEADDDKAVLMTMH 611 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 SAKGLEF VF+VG EE +FP S + +EEERRLAYV +TRA + L T A+ R L Sbjct: 612 SAKGLEFDTVFVVGAEENIFPGYRSQFDPMEIEEERRLAYVAITRAKRHLYFTCAKQRML 671 Query: 621 YGKEVYHRPSRFIGELPEE-----------------CVEEVRLRATVSRPV-----SHQR 658 YG+ + ++ SRF+ E+P + E+++ R + + + QR Sbjct: 672 YGQTMRNKVSRFVVEIPSQYMAYDDHTAVTASAAARSAEQMKPRTSYLQQQQRSYHAEQR 731 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 VEN S Y G+RV H FG+GT+++ + G L++AF +G K + A +A++ Sbjct: 732 EMEKRVENVS-YAPGERVHHGVFGDGTVLSAKAMGGDWLLEIAFDDKGTKKVAAKFAKMT 790 Query: 719 SV 720 + Sbjct: 791 KI 792 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 270/727 (37%), Positives = 399/727 (54%), Gaps = 42/727 (5%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + L LN Q+EAV LLVLAGAGSGKTRV+ ++ A+L + P SI VTFTN Sbjct: 4 FPLRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVTFTN 63 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ RI ++ + W+GTFH L R+LRAH + +DF I D +DQ L+K Sbjct: 64 KAADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAGLIK 123 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACD 182 R++K +N+ E + + I++ K + P S G E+ ++Y YQ Sbjct: 124 RILKDLNMHEALC--KCVVTKISNLKSNLITPEDYISNIEGYEFEERLGRIYMRYQNELK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 R +DF +L+L +L+ +L+ Y E+F ILVDEFQDTN QY ++LL Sbjct: 182 RYNALDFDDLILCVIKLFNENEDLLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHKN 241 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDDDQSIY +RGA + NI F DFP + ++LEQNYRST +I+ A++A+I N Sbjct: 242 ICAVGDDDQSIYKFRGANIHNILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTM 301 Query: 303 RLGKKLWTDGADGEPISLYCAF-NELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQS 360 R K LWT+ GE I YC NE +EA+++ IK G + AILYR Q+ Sbjct: 302 RKPKILWTERDWGEKI-FYCQLNNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQA 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEAL +PY++ G+ F+ R+EIKD L+Y+R I N+ D+ + R++NTP RGIG Sbjct: 361 RALEEALRMEGIPYQVISGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPPRGIGA 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + + ++ ++ ++A + +++E ++ L F+ LID L+++ + Sbjct: 421 SAISKIESEAKKYMISTFEAIKRIIKEDTVSATLKEKLVSFVTLIDELSEKD-----YKD 475 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +IKD T Y +E E RI+N+ E +++ + MP++ FL AL Sbjct: 476 AASMIKDILNFTGYLEEIEE---DRIQNVLEFLSSAEK----------MPVREFLDKVAL 522 Query: 541 EAGEGQADTWQDA---VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 + DTW++ V L+TLH+AKGLEFP VFI G EEG+ P +L++ L+EERR Sbjct: 523 FSN---VDTWENKKNYVSLLTLHAAKGLEFPVVFIAGCEEGILPYFKALEDPFELQEERR 579 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA L +T + R+LY K S FI ++P E +R + P + Sbjct: 580 LFYVGMTRAKNLLFITSVKQRKLYSKVQKQETSSFIKDIPPEYCICIRKDYSTFAPNKKE 639 Query: 658 ----RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 ++ P V +G +V+H +G G + + G G+ ++ V F G GIK L Sbjct: 640 PETSKIKPPFV-------IGCKVKHPTWGVGVVRDCYGEGDDLKVIVNFPGIGIKKLAPK 692 Query: 714 YARLESV 720 LE V Sbjct: 693 IVNLERV 699 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 258/645 (40%), Positives = 391/645 (60%), Gaps = 15/645 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L + LN +Q EA LL+LAGAGSGKTRVL HRIA+L+ + SPY I+A+TFTNK Sbjct: 3 LKNILNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ QL+ QG +WV TFH + R+LR + DF I D++DQ ++++ Sbjct: 63 AAQEMRDRVNQLLPERQGEIWVSTFHSMCLRILRREIGNLGYDSDFSIYDTDDQKTVMRQ 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEG--LRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 + K + +D K R + ++ K++G + + ++ + ++ + + Y+E + Sbjct: 123 VFKELQIDSKMLKERLVLSALSQVKNQGRSVSDYLLEDPEDFLDGKIRACIRLYEEKLKQ 182 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +LLLR EL+ P +L+ Y+ERF ILVDE+QDTN++Q+ + LLA + Sbjct: 183 NNALDFDDLLLRCKELFEKFPAVLEKYQERFRYILVDEYQDTNDVQFHLVYLLAKKYQNI 242 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA VENI F + FP + ++LEQNYRST+ IL AN +I N R Sbjct: 243 CVVGDDDQSIYRFRGANVENILSFESHFPNCKVVKLEQNYRSTAPILDLANVVIAENQHR 302 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 KKLWT +G +S + +EA V+ I+ D G + + A+LYR+NAQSR+L Sbjct: 303 KQKKLWTAEKEGLKVSFQEYESAKEEAAAVIRGIR---DAGWSYKDQAVLYRTNAQSRLL 359 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE + ++PY+I GG+ F++R+EIKD LSY++++ N+ DD A R++N P RGIG+ +L Sbjct: 360 EEQCIHWNIPYQIVGGVNFYQRKEIKDILSYMKILVNKKDDVALRRIINVPKRGIGEASL 419 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQETADMPLHVQT 481 ++Q L + L KA L+G+A S + F E++++ D+ L Sbjct: 420 LKLQQYG--ESLGGFSLVESLPFAKAAGLSGKALSMVGSFQEMLESW----KDVELSALI 473 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 DR+++D+ + E + ++R+EN++EL + SY EE+ D L AFL +L Sbjct: 474 DRILQDTEYEKDLQAEGAIEAESRMENIQELQGKLQ--SYIEENGDEGSLSAFLEEVSLL 531 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + ++D +D + LMTLH AKGLEFP V++VG+ EG+FPS S+ EEERRL YV Sbjct: 532 SDLDRSDLTEDKITLMTLHGAKGLEFPVVYLVGLNEGLFPSAQSMFTPEEREEERRLFYV 591 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 G+TRA ++L LT R ++G+ S F+ ++PEE +E+ L Sbjct: 592 GITRAEKELYLTAGRDRVVHGQYQSMLVSSFVDDVPEEHLEKKYL 636 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 256/649 (39%), Positives = 378/649 (58%), Gaps = 26/649 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S+LL SLN++Q+EAV +L+LAGAG+GKTR + R+ +++ P I+AVTFT Sbjct: 32 SFLL-SLNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFT 90 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM R+ +++ T+ G+W+GTFH +A R+LR++ L +DF ++ +DQL+L+ Sbjct: 91 NKAAREMLVRVSEIVDTT--GIWLGTFHAIAARILRSNAERVGLRRDFTVIGPDDQLQLI 148 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-----HHIQSYGNPVEQTWQKVYQAYQ 178 K ++ ++ M I K++GL P +Q N V + VY YQ Sbjct: 149 KAIVNDTQPGHPAEECKKMMHAIQRWKEKGLLPAGVTDTELQKCPNIV----RDVYYEYQ 204 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E DF +LLL ++ +L HY+E+F ++VDE+QD N +QY W+RL+ Sbjct: 205 ERLKALNCADFGDLLLYNVSMFSAHADVLSHYQEQFKYVMVDEYQDINTVQYLWLRLIVQ 264 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGDDDQSIY WRGA+V NI RF +DFP A+ +RLE NYRSTSNIL AA+A+I Sbjct: 265 KRKNICCVGDDDQSIYSWRGAEVGNILRFADDFPEAKIVRLECNYRSTSNILCAASAIIN 324 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN RLGKKLWT G+ + L ++ EA+F+ IK + E AIL R+ Sbjct: 325 NNKSRLGKKLWTTNHAGQKVGLMKFWDGRMEAQFISEYIKGSSEY--RFDETAILVRAGF 382 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q+RV EE L++ +PY+I G +F++RQEIKD ++YLR++ N +D AFER+VN P R + Sbjct: 383 QTRVFEEYLVRCGIPYKIIGSTKFYDRQEIKDLVAYLRVVTNPKNDIAFERIVNKPKRQL 442 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T+ +R +RD +L+L ++ +++ L R ++ LQ ++ + L Sbjct: 443 GASTVAKMRAYARDNRLSLLESGESMIRFGLLPERTSNTLQNLLDKFKCWRETLDTTSLT 502 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + + SG M + E G+ G ++IEN+ EL A F + FL H Sbjct: 503 TVMQAIAEGSGYMNMLKDE-GDAGASKIENIRELFAAVGNFENATK---------FLEHI 552 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLEEER 596 +L + + V LMTLH+AKGLEFP VF+ G EEG+FP + S+ + G LEEER Sbjct: 553 SLVTEVDSPEQANNHVYLMTLHAAKGLEFPLVFLPGWEEGVFPHEKSIHDSTGNALEEER 612 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 RLAYVG+TRA ++L ++ R + + SRFI ELP E V+ ++ Sbjct: 613 RLAYVGMTRAREQLFISCVAVREVNNWRQPMKISRFIKELPAEHVQVLK 661 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust. Identities = 275/744 (36%), Positives = 410/744 (55%), Gaps = 43/744 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M VS L LN +Q AV A +LVLAGAGSGKT+VL +RIA+L+ + P I+A+ Sbjct: 1 MVVSSQLAELNQEQTAAVTAGDGPVLVLAGAGSGKTKVLTYRIAYLLETKGIHPEQILAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ Q + WV TFH R+LR +DF I D+ D+ Sbjct: 61 TFTNKAAGEMKERV-QTIVEGDAPSWVSTFHAACVRILRREIDLLGYGKDFLIYDTRDKT 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +++K L+ NLD+K++P + I+ K+ P + + +V++AYQ+ Sbjct: 120 KIVKDLLADFNLDKKKYPHQAVAKKISGVKNNLQDPRELFY-------PYDEVFEAYQKR 172 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LLL L+ P LQ+Y+ +F ILVDEFQDTN Q I LL+ Sbjct: 173 LKKENALDFDDLLLLTLRLFEQYPDRLQYYQNKFQYILVDEFQDTNPAQNRLISLLSPPQ 232 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V +VGDDDQSIY +RGA V+NI F +P A+ +LE+NYRS+ IL AAN ++ NN Sbjct: 233 DNVFVVGDDDQSIYLFRGADVKNILEFEKTYPNAQVYKLEKNYRSSKTILEAANQVVTNN 292 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+LWTD +G P+ Y A +E DEA F+ I+ N L A+LYR+NAQS Sbjct: 293 PSRKSKELWTDNDEGYPLQYYEADDERDEAYFIAEEIRA---NRYQLPLIAVLYRTNAQS 349 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLE+ + + Y + GG F++R+E+KD ++YL ++ D+ ER++N P RGIG Sbjct: 350 RVLEDIFRKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCPQSDSQLERIINEPKRGIGK 409 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++D ++ + +TL+ A E + ++ R +++++F ++I + + + Sbjct: 410 TSVDKLKDYANRNNITLFDALLE-VDYTDISKRGKNSVKKFTDMIGNFRKMREYLTVREL 468 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V + SG + ++ +TR+EN+ E+ + ++F E E LQ FL+H+ L Sbjct: 469 IEEVAEKSGYLEALRSQNTKEAETRMENVREIYSMAKEF----EAEGGETLQEFLTHSTL 524 Query: 541 EAGEGQADTWQDAVQ----LMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 G DTW+D Q +MTLHSAKGLEFP VF+ G+EEG+FP + D +EEER Sbjct: 525 ---MGDIDTWEDEEQAQVVMMTLHSAKGLEFPGVFLTGLEEGVFPHIRTYDSEASMEEER 581 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------EVRL 646 RL YVG+TRA Q L LT+A R L G +PSRF+ E+ E+ + +V Sbjct: 582 RLCYVGITRAEQVLYLTWARERTLNGMTRMLQPSRFVSEIGEDLKDTQHQTLSGQGQVTS 641 Query: 647 RATVSRPVSHQRMGTPMVENDSG----------YKLGQRVRHAKFGEGTIVNMEGSGEHS 696 P Q + SG Y+ G + H K+GEG ++ + +G Sbjct: 642 TQNSHEPPQTQISSFSDKTSPSGKRNVNLAEESYQEGDLISHKKWGEGKVLQAQQAGSDW 701 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 L V+F G GIK L A+ A ++ + Sbjct: 702 VLTVSFDGAGIKKLAASVAPIKKL 725 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 250/650 (38%), Positives = 380/650 (58%), Gaps = 22/650 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 D LN+ QR+AV L++AGAGSGKTRVL +++A+L+ P+ I+A+TFTNKAA Sbjct: 4 DFLNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQ-NGYQPWEILALTFTNKAA 62 Query: 68 AEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EMR RI QL+ + M W GTFH + R+LR H LP F I D+ D L+K + Sbjct: 63 REMRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYDAADAKSLVKSI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ----------KVYQA 176 I+ + LD+K + P I+ K+ + P Y V++ + ++Y Sbjct: 123 IRELKLDDKIYRPGTVAARISDAKNHLMLP---DEYAADVDRMNRDKRDGLTELVRIYNI 179 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E C +A +DF +LLLR + L+ ++P I + Y +F +LVDE+QDTN +QY IR L Sbjct: 180 YIERCRQANALDFDDLLLRTYLLFHDRPDICEKYVRKFRYVLVDEYQDTNAVQYRIIRYL 239 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 ++ +VGDD QSIY +RGA + NI F +P A+ I+LE+NYRST NI+ AAN++ Sbjct: 240 CPGEARLCVVGDDAQSIYAFRGADIGNILNFQTHYPSAKLIKLERNYRSTENIVQAANSI 299 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYR 355 I N R+ K ++++ G+ + + A+ + DE+ VV I K + + +L + AILYR Sbjct: 300 ISRNKNRIPKTIYSENGAGDKVCIISAYTDKDESAKVVKEIFKLRRQHHISLDQVAILYR 359 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSR E+AL A++PYR+YGG+ F++R+EIKD ++Y R++ N D+ A R+VN PT Sbjct: 360 TNAQSRAFEDALRNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCNPQDEEALLRIVNYPT 419 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDALAQET 472 RGIG T+ + +R LW L +K AL R L F ELI + Sbjct: 420 RGIGQTTMSKLIAAARGNGEPLWSVL--LAPDKFGVALNRRTLEKLYAFAELIRSFQARA 477 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 M ++ +++ SG+ + ++ +G ++ EN++EL+ + + F +E++ ++ L Sbjct: 478 DVMGVYDLVSELLEASGITQELQGDRTPEGLSKWENIQELLNSIKGFE-SEQETGVVLLA 536 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 +L L + Q D + V LMT+H+AKGLEF VF+ G+E+G+FP + L Sbjct: 537 DYLPQVVLLTDQDQQDDDEPKVTLMTVHAAKGLEFEAVFVTGLEDGLFPGTAAKYSAREL 596 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 EEERRL YV VTRA +TYA+TR +YG+ + PS F+ E+ + VE Sbjct: 597 EEERRLFYVAVTRAKAHCFITYAKTRYIYGRLEFCEPSLFLQEIDPQYVE 646 Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 2/96 (2%) Query: 623 KEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG 682 K HR S F + V++ RLR +S+ + + T SG ++G + H +FG Sbjct: 696 KAFSHRSSAFEADSSRTTVQQGRLR-RLSQAATTVK-NTDAESESSGLQVGATILHERFG 753 Query: 683 EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 G + ++EG G + + V F+ G K L+ YA+ + Sbjct: 754 RGVVRSIEGHGINMKAVVDFEQNGTKNLLLKYAKFK 789 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 447 bits (1150), Expect = e-124, Method: Compositional matrix adjust. Identities = 272/728 (37%), Positives = 393/728 (53%), Gaps = 41/728 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN +Q E V LL+ AGAGSGKT+VL HRIA ++ S I+A+TFTNK Sbjct: 7 LLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILAITFTNK 66 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA+EMRHR G L+G S M + TFH + R+LR ++F I D+ DQ ++K+ Sbjct: 67 AASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQRAIIKQ 126 Query: 126 LIKAMN---------------LDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW 170 + ++ + L + P + S G + + S EQ Sbjct: 127 ICQSTDTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNSTNG---NSVTSITLQREQFI 183 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 V++ YQE A DF +L+ L P I YR R+ +LVDE+QDTN+ QY Sbjct: 184 LHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNRWKYLLVDEYQDTNHAQY 243 Query: 231 AWI-RLLAGDTGKVMI--VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 I L GD + + VGD DQSIY +RGA + NI F NDFP TI LEQNYRS Sbjct: 244 RLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNFENDFPDCHTILLEQNYRSCQ 303 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL 347 NIL AANALI NN R K LW++ GE + YCA + +E RFV +R++ D G +L Sbjct: 304 NILLAANALISNNQNRKDKNLWSELGAGEKVIAYCASSAEEEGRFVADRVRHLVDQGESL 363 Query: 348 AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 ++ A+ YRSN QSRV+EE+L++ S+PYR+ GG +F+ER EIKD L+YL +I N +D A Sbjct: 364 SDIAVFYRSNTQSRVIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPDDTLAL 423 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDA 467 R++N P RG+G + + + + + R +TL QA + E + A SAL+ L++ Sbjct: 424 RRILNVPKRGVGTVSENRLVEFASARGITLMQALSR-IDEINIQPSAKSALRDLFYLLNR 482 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 A + MP + D ++K + L + + + + R N+ + V + F+ ++ Sbjct: 483 FAGSS--MPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFVDSVEDFA---KENP 537 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L F+++ AL Q+D + LMTLH AKGLEF VF+ G+EEG+ P +MSL Sbjct: 538 GGTLSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPHEMSLK 597 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----- 642 E +EEERRLAYVG+TRA + L L+++ R+ Y V PSRF E+P+ + Sbjct: 598 EKNGIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGV-RLPSRFWDEIPQHLLRWHSRF 656 Query: 643 -----EVRLRATVSRPVSHQRMGTPMVEN---DSGYKLGQRVRHAKFGEGTIVNMEGSGE 694 L +RP R +++N + + V+H+ FG GT+V++ G G Sbjct: 657 THKRFTGPLYGFTARPAGESRQSVHVLKNRYPRESFSISDSVKHSVFGVGTVVDVLGLGP 716 Query: 695 HSRLQVAF 702 + V F Sbjct: 717 KQIIVVEF 724 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 257/648 (39%), Positives = 383/648 (59%), Gaps = 14/648 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +Q AV LLVLAGAGSGKT V+ +RIA L+ + +I+AVTFTNKA Sbjct: 4 LSTLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTNKA 63 Query: 67 AAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ L+G + G+ + TFH L R+LR + ++F I + DQ+ L+K+ Sbjct: 64 AKEMRERVDSLVGRQACKGIIISTFHSLGVRILRRNIELLGYKRNFSIYSTSDQIGLVKQ 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDRA 184 +++ +N+D K++ +W I++ K++ + P +G+ E +VY YQ A Sbjct: 124 IMREVNIDGKKYDADSIIWKISAAKNKLIPPDRFTPRFGDEYELMAAEVYPRYQSALKAF 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF ++++ +L N P +LQH++ERF ++VDE+QDTN QY + LLAG G + Sbjct: 184 NAIDFDDIIMLTADLLQNHPEVLQHWQERFRYVMVDEYQDTNASQYLLVNLLAGGYGNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA V NI F DF ++LEQNYRST NIL AAN +I +N R Sbjct: 244 VVGDDDQSIYGWRGADVGNILDFEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVL 363 K+LWT G P+ L ++ +EA VV R++ + + A ++ AILYR+NAQSR Sbjct: 304 EKRLWTASGSGRPLDLIVMQDDEEEATTVVERMQMERFKHNLAYSDFAILYRTNAQSRPF 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE L +PY + GGM+F+ER+E+KDA+SYL++I N ND+ A R+VN P RGIGD T+ Sbjct: 364 EEQLRFEDIPYVLIGGMQFYERKEVKDAISYLKVIGNSNDEIALLRIVNFPRRGIGDSTV 423 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHVQTD 482 + Q S ++ L +A + + + + + +Q F L+ +E + + L + Sbjct: 424 VKINQWSMEQGCPLLEAFGRVNEIEGIVEATRNRVQDFYRLLQGAVEEFSGEGDLAEKGR 483 Query: 483 RVIKDSGLRTMYEQEKGEKGQTR--IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 R+ K GL + + R +EN+E+++ + + EE L FL +L Sbjct: 484 RLFKQLGLEDELYRTIDDPALARRKVENVEQIINSMAAY---EERIPKPTLSGFLEKVSL 540 Query: 541 E-----AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +G+ + + +DAV LM+LHS+KGLEFP VF+VGMEE + P + S+ E ++EE Sbjct: 541 MDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRSIYEDFTVDEE 600 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 RRL YVG+TRA + L +T R+ YGK PSRF+ E+P + E Sbjct: 601 RRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEIPGHLLNE 648 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 271/695 (38%), Positives = 375/695 (53%), Gaps = 61/695 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN +QR AV S LL++AGAGSGKTRVL HRIA+L++ I+A+ Sbjct: 71 LDPEALLDGLNPQQRAAVEHHGSPLLIVAGAGSGKTRVLTHRIAYLLATGRARAGEILAI 130 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ L+G + MWV TFH R+LR + L F I D+ D Sbjct: 131 TFTNKAAAEMRERVEHLVGPAASRMWVSTFHSACVRILRREYKVLGLRSSFSIYDAADSQ 190 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQ 178 RL+ + + +NLD K++P R I+ K+E + P G +PV VY YQ Sbjct: 191 RLVTLVTRELNLDPKKYPARGLSNRISDLKNELVTPEDYAEQGEKDPV---LADVYTRYQ 247 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A +DF ++++ L P++ +HYR RF ++LVDE+QDTN+ QY ++ L G Sbjct: 248 ARLQQASALDFDDIIMTTVHLLQAFPNVAEHYRRRFRHVLVDEYQDTNHAQYVLVKELVG 307 Query: 239 -------------------------------------DTGKVMIVGDDDQSIYGWRGAQV 261 + G++ +VGD DQSIY +RGA + Sbjct: 308 GVVSTGSTTGGGSTTGGGSTTGGGSTAGGGSTAGGDLEPGELTVVGDADQSIYAFRGATI 367 Query: 262 ENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLY 321 NIQ F D+ A TI LEQNYRST ILSAANA+I N R K+LWT G I Y Sbjct: 368 RNIQEFEQDYRDATTILLEQNYRSTQTILSAANAVISRNADRKPKRLWTAAGAGARIVGY 427 Query: 322 CAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGM 380 A +E EARFV I D+ G + AI YR+NAQSR LEE L++ +PY++ GG Sbjct: 428 VADDEHQEARFVAEEIDRLGDSDGVRPGDVAIFYRTNAQSRSLEEVLVRVGLPYKVVGGT 487 Query: 381 RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQA 440 RF+ER+EIKDA++YLR +AN +DD RV+N P RG+G+R +V + +++ A Sbjct: 488 RFYERREIKDAIAYLRALANPDDDVNLRRVLNVPKRGLGERAEALVAGLAERERISFGAA 547 Query: 441 CRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLHVQTDRVIKDSGLRTMYEQEKG 499 ++ R + L+ F +L+ L A A P V+ +G Sbjct: 548 LDRAEDVPGMSTRTLNPLRGFRDLMRGLRALVEAGEPPAAILGAVLDRTGYLAELRASDD 607 Query: 500 EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA----------GEGQAD- 548 + +R+ENL EL +FS + + L+ FL +L A +G+A+ Sbjct: 608 PQDASRVENLAELHAVATEFSQTDPEGSLV---DFLERVSLVADSDQIPDEDVADGEAEQ 664 Query: 549 ---TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 Q V LMTLH+AKGLEFP VF+ GME+G FP SL + L EERRLAYVG+TR Sbjct: 665 EPKVDQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPHMRSLHDDAELAEERRLAYVGITR 724 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 A ++L L+ A R +G PSRF+ ++PE+ Sbjct: 725 ARERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDL 759 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 268/650 (41%), Positives = 385/650 (59%), Gaps = 24/650 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN +QREAV LL+LAGAGSGKTRV+ HRIA +++ + P +++AVTFTNK Sbjct: 3 FLKGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAVTFTNK 62 Query: 66 AAAEMRHRIGQLM-GTSQGGM-WVGTFHGLAHRLLRAH-----HMDANLPQDFQILDSED 118 AA EMR R+ L+ M V TFH RLLR + + F I D ED Sbjct: 63 AAKEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRPGFTRRFTIYDDED 122 Query: 119 QLRLLKRLIKAMNLDEKQWPP-RQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQA 176 QL+++K + + DEK++ R A+ I+ K+ + P + + N + +Y+ Sbjct: 123 QLQIIKAAYRTLGFDEKEFMQYRAALSRISHAKNTKVTPQEMFRDAVNKESEAVAALYEE 182 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y++A A +DF +LLL A L + + R + +++DE+QDTN QY +RLL Sbjct: 183 YEKALRNANALDFDDLLLEAVRLLRTDDATRESWNRRLSYVMIDEYQDTNRSQYELMRLL 242 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 V +VGD+DQSIY WRGA ++NI F D+P A+TIRLEQNYRST NIL+AA A+ Sbjct: 243 TEQHQNVCVVGDEDQSIYSWRGADIKNILDFEKDYPRAKTIRLEQNYRSTKNILAAAGAV 302 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYR 355 +ENN R GKKLWT+ GE + LY ++ +EA F+ + + + N G AILYR Sbjct: 303 VENNKARKGKKLWTESDSGELLGLYAGYDSENEALFIADTTEKYLASNPG--DHVAILYR 360 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +N+QSR +EEAL + Y + GG F++R EIKD ++YL+L ++ D + RV+NTP Sbjct: 361 TNSQSRQIEEALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRVINTPA 420 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID--ALAQETA 473 RGIG T++ + + RD L LW++ ++ ++ L+ R+ S+L F LI +L T+ Sbjct: 421 RGIGRTTVEQIERYGRDHGLNLWESIERIIDDQQLSTRSQSSLVVFRNLIQELSLVASTS 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 +P ++ +++ +G R M +QEK + +TR+ENL+EL+ A + E L Sbjct: 481 SLPDLIR--HILERTGYRKMLQQEKTPESETRLENLDELINAA-----ADAHERGETLGD 533 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL +AAL A D Q V LMTLH+AKGLEFP VF+ GME G+FP S++ LE Sbjct: 534 FLDNAALVADVDSYDE-QSPVTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEEALE 592 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRP--SRFIGELPEECV 641 EERRL YVG+TRA +KL LT+A+ RR +G R S F+ E+PE + Sbjct: 593 EERRLCYVGMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENLI 642 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 G + G V H K+G GT+V EG G+ +++ V F G+K LV YA L+ Sbjct: 737 GARAGMTVEHPKYGTGTVVRREGEGDDAKITVNFPRYGLKKLVEKYAGLK 786 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust. Identities = 250/722 (34%), Positives = 404/722 (55%), Gaps = 52/722 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LNDKQREA + ++L+LAGAGSGKTR + +RIA ++ SPYSI+AVTFTNK Sbjct: 5 LLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAVTFTNK 64 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ L+G + TFH RLLR + + +F I D++DQ R++K Sbjct: 65 AAKEMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQKRIVKA 124 Query: 126 LIKAMNL--DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 ++K N+ + + R + I+ K+E P + + + +VY Y +A Sbjct: 125 ILKGQNISFNGVKLTERDIVSIISKIKEEIKTPDEY----SVINKQIIEVYDKYNKALLE 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 + +DF+++LL ++L L KP IL+ + ++ I++DE+QDTNN+QY I L+A + + Sbjct: 181 SNAMDFSDILLNTYKL-LQKPEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIARKSSNL 239 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD++QSIYG+RGA + NI F N++ A+ ++LE+NYRST+ IL AAN LI+NN Sbjct: 240 CVVGDENQSIYGFRGANILNILNFENNYNNAKIVKLEENYRSTTTILDAANELIKNNKSS 299 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 KKLWT G+ I + N DE ++ I+ NG + ILYR+NAQSR+ Sbjct: 300 KDKKLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRENHQNGVPYRDMTILYRTNAQSRIF 359 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE LL+ ++P++++GG+ F+ R EIKD ++YL +I N D+ +R++N P R +G++ + Sbjct: 360 EEGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKVGEKGI 419 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ-------ETADMP 476 + + +R+ L L +A + K ++G A ++ +E+ D + + ETA Sbjct: 420 EKIIAYARENDLNLLEALSHI---KEISGLTAVGKEKLLEMYDIIKELKDLAYTETASYI 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + D++ Y E + + RIEN++E + + E + L +L Sbjct: 477 VQTLIDKI-----HYIDYINENYDDAEARIENIDEFKNSILEL---ENVVGELRLNEYLE 528 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 + +L + + D V+LMT+H++KGLEFP VF+VG E +FP ++ + +EEER Sbjct: 529 NVSLISATDDLEEKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRAMLDEKEMEEER 588 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-------------- 642 RL YV +TRA +KL L++A R +YG++ PS F+ E+PE+ ++ Sbjct: 589 RLCYVALTRAEKKLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDY 648 Query: 643 -------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNM 689 E + ++ T V ++ G+K+G +VRH KFG G I ++ Sbjct: 649 SDEINTYGNNKKFEKKKTEINTKNTIKLDENTKKVIDNLGFKVGDKVRHKKFGLGVIKSI 708 Query: 690 EG 691 + Sbjct: 709 DA 710 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 270/751 (35%), Positives = 397/751 (52%), Gaps = 60/751 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN+KQ EAV S LLVLAGAGSGKT+VL +IA+ + +N S Y I+A+TFTNK Sbjct: 3 LLKGLNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAITFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI + MW+GTFH + ++LR + +F I D +DQ +LK Sbjct: 63 AGKEMKERIENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQKLVLKE 122 Query: 126 LIKAMNLDEKQWPP------RQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQA 176 + K NL W + I+ K + ++ S+GN + +K+Y+ Sbjct: 123 IFK-QNL---TWESVLGEFKNAIIGIISDAKGKNVKSSEFSKYFSFGNNTD-VVEKIYKK 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y+E + +DF +L+ + EL+ P +L +Y E+F I VDE+QDTN+ QY I+LL Sbjct: 178 YEEILIKNNALDFDDLIFKTIELFKKCPEVLDYYSEKFKYIYVDEYQDTNDAQYEIIKLL 237 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A V VGD DQSIYGWRGA + NI F NDFP ++ I LE+NYRST IL AN L Sbjct: 238 ASKYKNVCAVGDIDQSIYGWRGANISNILNFENDFPNSKIILLEENYRSTQKILDCANEL 297 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I+NN R K LWT G+ I NE EA V + G L++ A+LYR+ Sbjct: 298 IKNNVNRKEKNLWTKKEGGDEIIYKSYQNENYEAIEVAQNVSNLIFEGYNLSDIAVLYRA 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QS +E AL + S+ YR+ GG++F++R+EIKD L+YL+LIAN DD AF R++N P R Sbjct: 358 NFQSFAIENALRKNSIAYRMVGGLKFYDRKEIKDILAYLKLIANPKDDNAFRRIINYPKR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQAC--RELLQEKALAGRAASALQRFMELIDALAQETAD 474 IG+ +L + + ++L+ E L +++ + + + F ++I D Sbjct: 418 SIGNVSLQKLEEYCYSENISLFDGLFRNEFLD--SVSKKLRTEFENFRDMIFGFITCVED 475 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + + ++ DS Y +E +K + L SY + L + Sbjct: 476 TEVEILIKELL-DSIKFVDYLRENEKKEFEKKAENINLFLEEISNSYKG-----IKLLEY 529 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE-GGRLE 593 L +L + + + D V L T+HSAKGLE+ VFI+GM+EG+FPS+ S+ E LE Sbjct: 530 LETNSLLSDIDKTEDSDDTVTLTTIHSAKGLEYKVVFIIGMDEGIFPSERSIKERDDGLE 589 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL---------------PE 638 EERRL YV +TRA +KL ++ ++ +YGK +R S F+ E+ E Sbjct: 590 EERRLFYVAITRAKEKLFISSTKSMTMYGKLNLYRVSSFVDEIINYVDDKSINLEFNFDE 649 Query: 639 ECVEEVRL-------------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHA 679 E V ++ R + +P++H + D YK+G+++ H Sbjct: 650 ERVTTSKIRNDAYTDYSRTYVPNADLGRTKLDKPLNHYQKPNKTSSKDV-YKVGEKIIHE 708 Query: 680 KFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 K+GEGT++ E +G L VAF G+GIK Sbjct: 709 KYGEGTVIKCEKAGTKVMLMVAFDGEGIKLF 739 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 241/647 (37%), Positives = 391/647 (60%), Gaps = 15/647 (2%) Query: 6 LLDSLNDKQREAVAAPRSN-LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN Q+EAV N LV+AGAGSGKTRVL R+ +++ P I+ VTFTN Sbjct: 18 LLDGLNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILE-NGIDPRRILTVTFTN 76 Query: 65 KAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RIG +G ++ + +GTFH LA R L ++ +A L +++ I DSED +++ Sbjct: 77 KAATEMKERIGNEVGEARAKKIMIGTFHSLAVRWLHQYYSEAGLKKNWTIFDSEDTNKVI 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 K L+K+ N+D+ + I++ K++ + P + P ++++ ++Y+ YQ+ R Sbjct: 137 KELLKSNNMDDSKQNVYATQSRISNLKNDMILPKDFRKQMEPQDKSFARIYERYQDRMAR 196 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +L+++ L + + + ++ R+ I+ DE+QDTN QY I+ + GD + Sbjct: 197 NNAVDFDDLIMKMVILLESNTEVRRKFQRRYKYIMCDEYQDTNECQYRMIKNIVGDKNNI 256 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDD Q IYGWRGA +E I F D+PG + ++LEQNYRST+ I++A NA++++N + Sbjct: 257 FVVGDDYQGIYGWRGANIEKILNFQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQ 316 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRV 362 + K +TD GE I Y A ++ EARF+ I+ +G + A+LYR+N QSR+ Sbjct: 317 MNKTCFTDKGMGEKIRKYEAPDDEQEARFIAQEIQNLCTFDGYKYEDIALLYRTNVQSRL 376 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE+ ++ ++PY + G F+ER+EIKD +S+++L N ++D A +R++N G+G T Sbjct: 377 LEDQFIRHNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIACDRILNMQA-GVGKTT 435 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL---AQETADMPLHV 479 + ++ + ++ ++++ + A A A L + ++AL + +D P+ Sbjct: 436 IKQIKDKANEKNKSIYEVVEYFNPKTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITD 495 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP-LQAFLSHA 538 + + K + ++ E+ RI+N++EL + Y +E++D P LQ FL Sbjct: 496 MLELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAK--GYEQENKD--PHLQDFLDQI 551 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL++ + + QD VQLMTLH++KGLE+P VF++GMEEG+FP SL + +LEEERRL Sbjct: 552 ALQSQQDKV-VNQDKVQLMTLHTSKGLEYPVVFMIGMEEGLFPHSRSLSDTVQLEEERRL 610 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEV-YHRPSRFIGELPEECVEEV 644 AYVG+TRA + L T+AE R Y + + PSRF+ ELP+E ++EV Sbjct: 611 AYVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEELPDELIQEV 657 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust. Identities = 258/669 (38%), Positives = 386/669 (57%), Gaps = 39/669 (5%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L LN QR+AV S L++AGAGSGKTRVL RIA+++ + +PY+I+A+TFT Sbjct: 3 SQILKGLNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMIE-QGVAPYNILALTFT 61 Query: 64 NKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA +MR RI Q++ + + +GTFH + R+LR + PQ F I + D L Sbjct: 62 NKAAEQMRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGFPQSFTIYEPSDCKNL 121 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP---------------HHIQSYGNPVE 167 LK ++K +NLD+ ++ P I+ K+ + P I +GN Sbjct: 122 LKTIVKELNLDDTKYKPAMLASRISYAKNCLVTPGAYLANAGAAAEDRRMQIPEFGN--- 178 Query: 168 QTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNN 227 +Y Y C R G +DF +LLL+ + L + P + Y+E+F ILVDE+QDTN Sbjct: 179 -----IYNIYCARCKRNGAMDFDDLLLQTNILLRDCPDVTARYQEQFKYILVDEYQDTNY 233 Query: 228 IQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 QY IR L+ KV +VGDD QSIY +RGA++ENI F DFP A +LEQNYRST Sbjct: 234 AQYVIIRRLSQLHSKVCVVGDDAQSIYSFRGAKIENILSFKKDFPNAMIFKLEQNYRSTR 293 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGA 346 I+ AAN++IE N+ R+ KK +++G GE I + A+ + +EA VV+ ++ + G Sbjct: 294 TIVEAANSVIERNSKRMEKKCFSEGDMGEKIRVLRAYTDREEAEMVVSDLRDKVRAAGDE 353 Query: 347 LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAA 406 AE AILYR+N QS+ LE+AL + +PYRIY G F++ +EIKD L+Y+RL+ N DD A Sbjct: 354 WAEAAILYRTNNQSQALEDALRRKGIPYRIYKGNSFYDHKEIKDLLAYIRLVINPRDDEA 413 Query: 407 FERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR---FME 463 F+R+VN P RGIGD T++ + ++ R L++W+A L E + +++ F+ Sbjct: 414 FKRIVNYPARGIGDTTVERIALLAKARNLSMWEAVDALTAEPVTDPVQKTIVRKVAEFVA 473 Query: 464 LIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE 523 L+ L+ A+ L+ + SG+ Y E + + ++N+EEL+ + + F+ Sbjct: 474 LVRGLSLARAEKGLYDLGLEIATRSGIIGAYRAENTPEATSALDNIEELLNSMQLFNEQR 533 Query: 524 E---------DEDLMPLQAFLSHAALEAGEGQADTW-QDAVQLMTLHSAKGLEFPQVFIV 573 E E+ ++ +L L + D ++ V LMT+HSAKGLE+ V+IV Sbjct: 534 EAEIRAGERQQEERATIEEWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGLEYKFVYIV 593 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 G+EE +FPSQ +++ EEERRL YV +TRA + TL+YAE R +G + RPS F+ Sbjct: 594 GLEENLFPSQRAVESPDGFEEERRLFYVALTRAKELATLSYAEMRFKWGNMEFSRPSCFL 653 Query: 634 GELPEECVE 642 E+ +E Sbjct: 654 REIDSRYLE 662 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 258/699 (36%), Positives = 397/699 (56%), Gaps = 30/699 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L LN++Q+EAV S LLVLAGAGSGKT+V+ H+I +L+ I+A+TFTNK Sbjct: 6 ILSGLNERQKEAVLHFDSPLLVLAGAGSGKTKVITHKIMYLVKHYGIPLNRILAITFTNK 65 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI + +G + WV TFH A + LR + ++F I D ED +L+K+ Sbjct: 66 AAEEMKERIEKAIG--EKPQWVMTFHSFAAKFLRMEAENIGYDRNFVIYDEEDSKKLIKK 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINS--QKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 ++K +NL+E+++ P + I+ Q D I S N +T V++ Y+E Sbjct: 124 VLKDLNLNEEKFKPDKIKDIISKIKQDDNPEDQLEIYSISNSYIKT---VFEKYEEELKN 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 + DF +LL++ ++ N P +L+ +R +F ILVDE+QDTN IQ+ ++LL GD + Sbjct: 181 SNAFDFDDLLIKTVKILSNHPEVLERWRNKFDYILVDEYQDTNRIQHKLLKLLVGDKHTI 240 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD Q IY WRGA ENI F DFPG + ++LE+NYRST IL ANA+I + G+ Sbjct: 241 TVVGDPAQCIYTWRGAHPENILDFEKDFPGTKIVKLERNYRSTKKILDCANAVISKSKGK 300 Query: 304 LGKK---LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 K LWTD +GE I L NE +EARF+ N+IK + G+ + A+L R + Sbjct: 301 WKGKVLTLWTDKEEGEDIFLVPLENEKEEARFIANKIKQLAQD-GSYGDFAVLVRMTFLT 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EEA + +PY++ GG++FFER E+KD L+YL+L N D A+FER + P RG+GD Sbjct: 360 RNIEEAFISNGIPYQVIGGLKFFERAEVKDILAYLKLAVNPKDYASFERSLTVPPRGVGD 419 Query: 421 RTLDVVRQTSRDRQLTLW-QACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + L+ ++ + T W QA ++ + LQ ++EL++ + + P Sbjct: 420 KGLEYIKSNFK----TDWIQALKDSYER--FNKSVKIKLQEYLELMEYVLENAKFSPSKT 473 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + +++ G + ++E + + R+EN+ EL+ A E +++ L F +A Sbjct: 474 AKE-IVERIGYQEYLQKEYEKDWEDRVENINELIIALE-----EAEKEGKTLDQFFEESA 527 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + D Q+ ++MT+H AKGLEF VF+ G+EEG+FPS + D+ +LEEERRL Sbjct: 528 LMQAQDTIDN-QNKAKIMTVHGAKGLEFDTVFVAGLEEGIFPSGRAFDDPTQLEEERRLF 586 Query: 600 YVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH-- 656 YV +TRA KL LTYA+ R+ YG K V + S+FI ++ E V+ + + H Sbjct: 587 YVAITRAKNKLYLTYAKERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQKTQPNVSNRHNL 646 Query: 657 --QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 + + DS ++G V+H FG+G + + G Sbjct: 647 TIKSQSKSYFDFDSDIRVGMLVKHDVFGKGVVKKIVGKN 685 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 288/789 (36%), Positives = 418/789 (52%), Gaps = 90/789 (11%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-------------------- 48 +LN +QR+A A LL+LAGAGSGKT VL+HRIA LM Sbjct: 35 NLNPEQRKAALATEGPLLLLAGAGSGKTTVLIHRIANLMKYGRGSDCDEVPEWVTAEDLA 94 Query: 49 ----------------------VENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMW 86 V+ P+SI+A+TFTNKAA E++ R+ +++G S +W Sbjct: 95 FLEGYVAHPDPEKKAEQERLCRVDPAVPWSIIAITFTNKAAGELKERLERMLGPSANDIW 154 Query: 87 VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYI 146 TFH R+LR + F I D+ D R++K +IK NLD+K +P + + YI Sbjct: 155 ASTFHSACVRILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDFNLDDKAFPAKSIVGYI 214 Query: 147 NSQKDE-GLRPHHI---QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN 202 + KD L ++ + G+ KVY Y++ A +DF +++L L Sbjct: 215 SRAKDAMKLGADYLAECEKSGDYRLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLKE 274 Query: 203 KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVE 262 + ++Y+ +F +L+DE+QDTNN+QY LAG + +VGDDDQSIY +RGA +E Sbjct: 275 FDEVREYYQRKFRYVLIDEYQDTNNLQYLLASTLAGGYENICVVGDDDQSIYRFRGATIE 334 Query: 263 NIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYC 322 NI F + + GA IRLEQNYRST NIL A+NA+I NN GR GK+LWTD +G+ + Y Sbjct: 335 NILSFESQYKGARVIRLEQNYRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQCYT 394 Query: 323 AFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRF 382 A NE DEA++V +I G + A+LYR NAQS +E+A + +PYRI GG+RF Sbjct: 395 AMNEHDEAQYVAAQILGSFSAGRHWKDHAVLYRMNAQSNQIEQAFKRNGVPYRIIGGIRF 454 Query: 383 FERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR 442 F+R EIKD L+YL +I N DD +R++N P RGIG T++ + + +LW+ Sbjct: 455 FDRAEIKDMLAYLCVINNPGDDLRLQRIINNPPRGIGATTIERAQTIAAQEGRSLWEIIS 514 Query: 443 ELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKG 502 L +AA+ L F ++I L + + +M L + ++ +G M EQ+ + Sbjct: 515 NARVYPELQ-KAAAKLASFTDMIAELRKLSGEMELPAFYEELVARTGYAVMLEQKNTIED 573 Query: 503 QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSA 562 +TR+EN++EL+T+ + N + L FL AL D +D V +MT+HSA Sbjct: 574 RTRLENVQELLTSINGYLENAVEPS---LAGFLDEIALYTDLDSHDPEEDCVVMMTMHSA 630 Query: 563 KGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG 622 KGLEFP VF+VG+EEG+FP ++ E +EEERRL YV +TRA +KL +T A R L+G Sbjct: 631 KGLEFPVVFVVGVEEGIFPGIRAIGEAEEMEEERRLCYVAMTRAKEKLYMTCASQRMLFG 690 Query: 623 KEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVE-------NDSGYKL--- 672 + +RPSRF+GE+PEE VE+ R Q P + + GY L Sbjct: 691 RTNNNRPSRFLGEIPEEYVEKSGRLPRSERTEEKQDGEQPKKKAPAWRKPAERGYSLGGG 750 Query: 673 ------------------------------GQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 G V+H FG+G +VN+ G + +++AF Sbjct: 751 YTTYPKGTAVEPKIGGGGAKSAAGLADFRKGDMVQHKAFGKGMVVNLMPMGGDALIEIAF 810 Query: 703 QGQGIKWLV 711 G K L+ Sbjct: 811 DNVGTKKLM 819 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 288/729 (39%), Positives = 413/729 (56%), Gaps = 23/729 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L L+ Q AV +LV+AG GSGKTRVL HR+A+L+ P+ I+AVTFTNK Sbjct: 45 ILIGLDADQCVAVTTTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVAVTFTNK 104 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA E+R R+G L+GT + GTFH L R+LR L F I D EDQL L+K Sbjct: 105 AAREIRERLGGLLGTESAQLVQAGTFHSLCVRILRRDGYRIGLEPAFTIYDEEDQLALVK 164 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDR 183 + ++ + LD +++ PR + ++ K++ P +QS ++ +VY+ Y + R Sbjct: 165 QALRDLGLDPQRFSPRMLLGRLSRAKNDQHSPSDLQSMAQSYWDEVAARVYERYAQYLQR 224 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 A VDF +LLLR EL+ P +L HY++R+ + VDE+QDTN +QY +R LA + Sbjct: 225 AQAVDFDDLLLRTVELFTEYPDVLAHYQDRWRYLQVDEYQDTNRLQYQLVRQLASGHRNL 284 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQSIY WR A + NI F DFP A IRL +NYRST I++AA+A+I N R Sbjct: 285 CVVGDPDQSIYSWRQADIRNILEFQRDFPDATVIRLGRNYRSTPQIVAAADAVIRVNRQR 344 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRV 362 + + LWT+ G PI L ++E EA VV+ I G A + A+LYR NAQSR Sbjct: 345 IERPLWTENPPGPPIRLLACWDEQQEAEMVVSEIDRLVRTGNARYRDIAVLYRINAQSRS 404 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT--RGIGD 420 +EEAL++ +PY++ GG+RF+ER+EIKDAL+ LR++ N D + RV++ RGIG+ Sbjct: 405 VEEALVRRQIPYQVIGGVRFYERKEIKDALALLRVLVNPRDWLSLRRVLSETAFGRGIGE 464 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALA-GRAASALQRFMELIDALAQETADMPLHV 479 +TL + Q + +Q + L++E+ A AA+ ++R EL L + A M H Sbjct: 465 KTLLQLEQWGQRQQCSPADVLLLLVEEREEAPALAAATVRRLRELGGELVRLRAAMVEHP 524 Query: 480 QT---DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + D ++ SGL Y + R ENL +L + ++ E L PL FL Sbjct: 525 ASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYDTVPAAEGL-PL--FLE 581 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 AAL A +A+ D V L+TLH+AKGLEFP VF++G+EEG+ P +L+ LEEER Sbjct: 582 EAALVAAIDEAEMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEAELEEER 641 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE-VRLRATVSR--P 653 RL YVG+TRA ++L L+Y +R +G PS F+ +LP + VE R V R P Sbjct: 642 RLFYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDLPPDVVEAGSRASERVPRVAP 701 Query: 654 VSHQRMG-----TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 + G P+V + GQRV H FG+G +V + + V F+ G K Sbjct: 702 PAGGHAGPVESSAPVVPR---LRAGQRVFHPAFGDGFVVAVREQAGDQEVTVQFKRHGTK 758 Query: 709 WLVAAYARL 717 L+A+ A+L Sbjct: 759 TLLASLAKL 767 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 259/724 (35%), Positives = 413/724 (57%), Gaps = 31/724 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q+EA S+L ++AGAGSGKTRV+ +RIA+L+ P I+A+TFTNKAA E Sbjct: 7 LNKNQKEAATYLDSHLRIIAGAGSGKTRVVTYRIAYLIDEIGVDPRKILAITFTNKAANE 66 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ RI L+G G V T H L R+LR H N P +F I+D EDQ L+K++ Sbjct: 67 MKERITSLLGPHALGSLVCTIHSLCVRILRRHINVINYPSNFMIMDEEDQKALIKKIYNN 126 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--EQTWQKVYQAYQEACDRAGLV 187 +++D K + + I++ K + P E KVY+ Y E + ++ Sbjct: 127 LDIDAKTISIKSMIASISNYKMANIDPERAMELAGQFQGEIKKAKVYKEYLEYQENHFML 186 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LLL+A ++ N P +L+ ++ +F I VDEFQD NI+Y ++L++ D +VG Sbjct: 187 DFDDLLLKAVYIFENYPDVLEKWQHKFQYIHVDEFQDVGNIEYRLVKLMSQD-AITCVVG 245 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 D DQ+IY +RGA V I F DF +T+ L+QNYRST NIL+ +N+LI N RL K Sbjct: 246 DPDQTIYSFRGANVNYILDFDKDFKPCKTVILDQNYRSTGNILNISNSLIRKNRNRLEKD 305 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQSRVLEE 365 L+T+ G + Y +E +EA ++ ++I+ + +G + AILYR+N SR +E+ Sbjct: 306 LYTEATGGSEVIHYMGKSEQEEADYICSQIEKIISEVDGVNYRDFAILYRANYLSRTIEQ 365 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 +++ + YRI+GG++FF R+E+KDALSYL+L+ N ++D AFER++N P RGIG +TL+ Sbjct: 366 SMISHGIDYRIFGGLKFFSRKEVKDALSYLQLVCN-DEDLAFERIINVPARGIGKKTLEN 424 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 ++ + + Q++L++A + L+ +A + ++ ++ Q + +PLH + ++ Sbjct: 425 IQLVALNNQVSLYEALTLFSDQIKLSSKAKKEIITLVKAVETAKQSS--LPLHEMFENLM 482 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 D G M +++ + RI+N+ EL + +F ++ D+ ++ +L +L Sbjct: 483 NDVGYIDMLKKDLED---NRIDNIHELQRSIYEFQ--NQNPDIATIENYLQEISLYTDND 537 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRLAYVGVT 604 D Q V LM++H AKGLEF VF++G+ EG+FPS +L E LEEERRLAYV T Sbjct: 538 NLDDGQ-YVSLMSIHMAKGLEFDYVFVLGLSEGIFPSFRALSESDEGLEEERRLAYVAFT 596 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRP---SRFIGELPEECVEEV--RLRATVSRPVSHQRM 659 RA ++L LT +E V P SRFI E+ E ++ V + R + ++ Sbjct: 597 RARKQLFLTDSEGFSF----VTDSPKISSRFIDEIGSEGIKHVGTKPRFKTANFINTAPT 652 Query: 660 GTPMVEND--SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYAR 716 +V N+ + + G V H FG+G +V + G + L +AF+ G+K L+A + Sbjct: 653 KEELVGNNEVTDWSNGDFVLHDTFGKGVVVKVNG----NTLDIAFELPAGLKTLMANHKA 708 Query: 717 LESV 720 L+ + Sbjct: 709 LKKL 712 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust. Identities = 284/719 (39%), Positives = 393/719 (54%), Gaps = 37/719 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFTNK Sbjct: 5 LLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTFTNK 64 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ L+ G +WV TFH A R+LR + L F + D +DQ LLK Sbjct: 65 AAEEMRERLRGLV-PGAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTALLKE 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQEA 180 ++K + L + P + ++ K+ G+ + + Y V YQEA Sbjct: 124 VLKELALSARPGPIKA---LLDRAKNRGVGLKALLGELPEYYAGLSRGRLGDVLVRYQEA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 G +DF ++LL A L +L+ R+R I VDE+QDT+ +QY + RLLAG+ Sbjct: 181 LKAQGALDFGDILLYALRLLEEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAGEE 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 +M VGD DQ IY +R A ++NI F D+P A RLE+NYRST IL ANA+I N Sbjct: 241 ANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRFANAVIVKN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RL K L GEP+ LY A + +EARFV I G A+LYR+NAQS Sbjct: 301 ALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARL---GPPWDRYAVLYRTNAQS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGIG Sbjct: 358 RLLEQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGIGP 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T V+ ++++ L W+A L+E A L+ F+ L++ L Q+ P Sbjct: 418 ATWARVQLLAQEKGLPPWEA----LKEAARTFPRPEPLRHFVALVEEL-QDLVFGPAEAF 472 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +++ + + E + R+EN+EEL+ A + E ED LQ FL AL Sbjct: 473 FRHLLEATDYPAYLREAYPEDAEDRLENVEELLRAAK------EAED---LQDFLDRVAL 523 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + S+ LEEERRL Y Sbjct: 524 TAKAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRNSVSTLEGLEEERRLFY 583 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRA ++L L++AE R +YG+ RPSRF+ E+ E E V P Sbjct: 584 VGITRAQERLYLSHAEEREVYGRREPARPSRFLEEVEEGLYE-------VYDPYRRPPSP 636 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 P ++ G+RV H +FG GT+V +G + V F+G G+K L YA L+ Sbjct: 637 PPHRPRPGAFRGGERVVHPRFGPGTVVAAQG----DEVTVHFEGFGLKRLSLKYAELKP 691 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust. Identities = 262/727 (36%), Positives = 406/727 (55%), Gaps = 42/727 (5%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 D LN Q++AV LL+LAGAGSGKT+ L HRIA+++S P I+AVTFTNKAA Sbjct: 3 DKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNKAA 62 Query: 68 AEMRHRIGQLMG---TSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 EMR R+G ++ T + M W+GTFHG+ ++LR N+P +F I D D+ ++ Sbjct: 63 REMRERLGSMLNQDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDESDKKGVV 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACD 182 K+ +K++N+ +KQ A I+++K++ P + + P +Q ++Y+ Y++ Sbjct: 123 KQAMKSLNITDKQIKASAASGIISAEKNKMNTPEIVIANARFPYQQQIGEIYKMYEKLKR 182 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + +DF +LLL L N P + + +++ F I++DE+QDTN QY + LL D Sbjct: 183 ESNALDFDDLLLETVNLLKNHPEVRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLTNDKKN 242 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY WRGA NI F DF GA+ I+LEQNYR+T IL AA +I NN Sbjct: 243 ICVVGDDWQSIYSWRGADFRNILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQ 302 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQSR 361 R KK+WT G G+P+ +Y A ++ EA ++ N I ++G + AILYR+N+QS Sbjct: 303 RTDKKIWTAGNQGDPVEVYSALDDKSEAAWIANVISNKVESGEYNFDDFAILYRTNSQSY 362 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E+AL Q S+P I GG RFF+R IKD ++Y+RL ND ++F R+ N P+RG+G Sbjct: 363 TIEQALNQRSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANVPSRGVGPT 422 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--MPLHV 479 +L ++ + A ++ + + RA +ALQ + + E + P + Sbjct: 423 SLAKFISWQGQTEMDIISALKQSGEATTITARARNALQELGCKLQIIRSEILNNTAPSDI 482 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++VI +G R Y + + + E L L+ +R ++ + E + + +S + Sbjct: 483 -LEKVIDKTGYRD-YILDGSPQAEDNNEYLNTLIDESRPYA---DIETYLEEVSLMSSSD 537 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD-EGGRLEEERRL 598 L++ +G V LMTLH+AKGLEFP VF+ GMEEG+ P +LD LEEERRL Sbjct: 538 LQSEKGY-------VTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLDGNPDDLEEERRL 590 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE-----LPEECVEEVRLRATVSRP 653 YVG+TRA ++L L+++ +R + + Y+ PSRF+ + + E EE + + Sbjct: 591 CYVGMTRARERLYLSHSASRYQFNQRKYNDPSRFLCDAGLFIVNNESQEEAYVES----- 645 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 +D ++G RV+ A FG GT+ +++G +QV F K L Sbjct: 646 -------YDTFYDDINLEIGTRVKSAVFGVGTVEDIDGMA----VQVGFDSGQSKKLNIE 694 Query: 714 YARLESV 720 YA+LE + Sbjct: 695 YAQLEII 701 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 248/633 (39%), Positives = 362/633 (57%), Gaps = 20/633 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN +Q EAV +L+LAGAGSGKTRV+ ++IA+L+ P +I+A+TFTNK Sbjct: 3 FLKELNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVALTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ RI ++G +W GTFHG LL+ +L F I D DQ L+K Sbjct: 63 AAEEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDENDQEDLIK 122 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDR 183 ++K +N K + R I+ KD+ + P S N ++ +VY+ Y++ R Sbjct: 123 DILKDLN-RAKDYNARDIKEKISRLKDQLITPQEFSSLISNSFDEIVLEVYKRYEKELRR 181 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DFA+LLL + L KP I +++ +LVDE+QDTN QY +++ D K Sbjct: 182 NNALDFADLLLYSIRLLQEKPAICGFLQDKIEYVLVDEYQDTNKAQYELFKIIVLDKQKF 241 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA +NI R DF I L +NYRST IL AN LI NN+ R Sbjct: 242 SVVGDDDQSIYSFRGADYQNIFRLEKDFKNLRVIFLTKNYRSTQQILEIANVLIANNDKR 301 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LW+D DG L+ A NE DEA FV +IK G +E A+LYR+N QSR Sbjct: 302 YPKELWSDKKDGTYPVLFRALNEEDEANFVARQIKLEVAKGRRWSEIAVLYRTNRQSRSF 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEAL++ ++PY++ GGM FF+R+E+KD ++YL +I N ND + +R++N P RGIGD T Sbjct: 362 EEALIRNNIPYKVIGGMSFFDRKEVKDIVAYLNVIYNPNDIVSMKRIINVPRRGIGDATF 421 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 +++R+ ++ +L +A +E+ + ++ F EL L + L Sbjct: 422 NMIREYY-NKGYSLLEAVKEV-------SKIKKEVKSFYELWTYLLVLKDSLTLRDLIST 473 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I + + +E ++ ++ + R+ENL EL+ FS +D L FL+H +L Sbjct: 474 IINKTNYLSEFENQEKKELENRMENLMELMDFADNFSGKAQD----TLGEFLTHLSLTNS 529 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + ++ + V L+TLHS KGLEF VF+VGMEEG+ P + ++EERRL YVG+ Sbjct: 530 KLESTLEEGKVSLITLHSVKGLEFEVVFLVGMEEGILP-HYNATTKEEIQEERRLCYVGI 588 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 TRA +KL L+YA R Y + Y PSRF+ E+ Sbjct: 589 TRAKEKLYLSYAAKR--YSR--YQEPSRFLEEI 617 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 269/693 (38%), Positives = 383/693 (55%), Gaps = 68/693 (9%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN QR V LL+LAGAG+GKTRV+ R+A L+ E + I+AVTFTNKAA E Sbjct: 7 LNPAQRAGVEYRGGPLLLLAGAGTGKTRVITQRVAALID-EGVPAWRILAVTFTNKAAGE 65 Query: 70 MRHRIGQLMGTS-----QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 MR RI L+ + G W+GTFH + R+LR H L ++F I D++DQ L++ Sbjct: 66 MRERIAGLLEMELDELRRDGPWIGTFHSICARILRRHGQGVGLTRNFSIYDADDQKTLMR 125 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACD 182 R++K +++D K + A+ I++ K+ G H + + Y PV +K + Y+ Sbjct: 126 RVLKDLDIDPKAFSASAALGKIDAAKNLGYARHQLDAMNYSEPVASWTRKAWTLYEGRLR 185 Query: 183 RAGLVDFAELLLRAHELWLN-KPHILQH-------------------------------- 209 A VDF +LL A EL KP Q Sbjct: 186 AADAVDFNDLLALAVELLRKAKPAQPQPGARSFGSGSGSGSGSGARRMALRTTRGPGSGA 245 Query: 210 -------------YRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 R RF +++VDEFQDTN +Q + LL G + ++ +VGDDDQ+IYGW Sbjct: 246 PTASGGAVNPVLGLRRRFFHVVVDEFQDTNPVQAELVELLCGPSAQLCVVGDDDQAIYGW 305 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGE 316 RGA V+ I F + PG E IRLEQNYRST++IL ANA+I R K+LW+D GE Sbjct: 306 RGADVKQILNFPDRHPGCEVIRLEQNYRSTTHILDCANAVIRGGARRHSKRLWSDLGPGE 365 Query: 317 PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 L+ +E DEA++V R++ D G + E A+ YR++AQSR LEEA+ A + YR+ Sbjct: 366 RAELHGFADERDEAQYVARRVRRAIDEGESPGEIAVFYRTHAQSRPLEEAMRLAGVRYRM 425 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 GG+RFF+R+EIKD ++YLRL+ N D RV+N P R IG RT++ + + ++ + Sbjct: 426 LGGIRFFDRREIKDLIAYLRLLTNPGSDLDCLRVINVPARRIGARTIERLSAWAISKESS 485 Query: 437 LWQACRELLQ--EKALAGRAA-SALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTM 493 L+ AC + E+A GRAA A++ F EL++ L ++ ++ H V+ + Sbjct: 486 LYDACGPASKHGEEAGLGRAAVKAVKGFWELVEGLRDDSEELSHHETASLVLGRTNYLES 545 Query: 494 YEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA 553 + E + +TR ENL E A +F + D + L +L +L AG G T A Sbjct: 546 FAAE--QDAETRTENLYEFRGALEEFGEEQPD---VSLAEYLEQISLAAG-GDEATVDAA 599 Query: 554 VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGR--LEEERRLAYVGVTRAMQ 608 + LMT+HSAKGLEF +V + GMEE +FP SLD GR LEEERRLAYV ++RA + Sbjct: 600 ITLMTIHSAKGLEFDRVMLTGMEERVFPHVRSLDPENPKGREALEEERRLAYVAISRARR 659 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 L+L++ E R L+G + PSRF+ LPEE + Sbjct: 660 WLSLSFVERRFLWGSTQLNEPSRFLRALPEEGI 692 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust. Identities = 269/754 (35%), Positives = 417/754 (55%), Gaps = 43/754 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D + LL L QR AV LL+LAGAGSGKTRV+ R+A+L+ ++I+A+T Sbjct: 3 DDADLLADLTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLLRA-GVRAHNILAIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM++R+ +L ++ +WV TFH L RLLR + ++F I D++D+ + Sbjct: 62 FTNKAAGEMKNRVEKLAPGNR--VWVSTFHSLGARLLRQYAERLGFDRNFTIYDTDDRNK 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPVEQTWQKVYQAYQEA 180 L+K ++A +D ++ P + I+ K++ + P + ++ + ++T VY Y++ Sbjct: 120 LVKDALEAAGIDNVKFTPERIAGAISKAKNQLVTPPQYERTATDFFQKTVAAVYPRYEKR 179 Query: 181 CDRAGLVDFAELL-LRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +LL L A L N+ + RF I++DE+QDTN+ QY ++ L+ + Sbjct: 180 LRSANAMDFDDLLYLPAMALKQNE-ELRAELDSRFRYIMIDEYQDTNSAQYQIVKQLSIN 238 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGD DQSIY WRG+ ++ I F DFP A TI L QNYRST +I+ AA+ LI++ Sbjct: 239 NPNVCVVGDPDQSIYKWRGSDIKIILDFERDFPNARTITLAQNYRSTKSIIRAASVLIDH 298 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNA 358 N R K L TD GEP+++ N LDEA VV RIK G + AI R NA Sbjct: 299 NKQRKKKDLVTDNPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAGTFKYRDHAIFMRINA 358 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 +R LE A ++ +P++I G+ FFER+E +D L+YLRL+ N +D +F RVVN P RGI Sbjct: 359 LTRSLESAFVKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVVNAPARGI 418 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G +LD ++ + +++ L A ++ + + G+AA+ L+ F L+ L + D P H Sbjct: 419 GKVSLDKLQSFAASQEIGLLAAAGQIAKITEIKGKAATGLRDFHRLMTDL-RSKMDQPPH 477 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+ SG M E+ R+ N+ ELVTA +QF ++E++ + FL Sbjct: 478 ELVRLVLDKSGYEAMLRDSTDEEDADRLANVSELVTAAKQF-WDEDNS--RTITDFLEQI 534 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L + D D V +MTLH++KGLEFP V+I+ +E+G+ P + SL +EEERRL Sbjct: 535 TLASDTDGWDEQADHVSVMTLHASKGLEFPAVYILAVEQGLLPHERSLANDEEIEEERRL 594 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE---------------CVEE 643 +VG+TRAM++L L +A R G+ Y S+FI ELP + +E Sbjct: 595 CFVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPRDVRFIDPSMARNVARTAADE 654 Query: 644 VRLRATVS---------RPV--SHQRMGTPMVE------NDSGYKLGQRVRHAKFGEGTI 686 R++++ + RP+ R P ++ D+G +G V+H +FG G + Sbjct: 655 WRVKSSAAAKDWADTGLRPLIPPASRKPNPGLKPTIPDAPDTGLAVGVLVQHEEFGIGNV 714 Query: 687 VNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G +++V F G+K V +L+ + Sbjct: 715 AEVSGFGALRKVRVRFAAHGVKLFVGDKIKLKVI 748 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 272/737 (36%), Positives = 408/737 (55%), Gaps = 42/737 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCS--PYSIMAVTFT 63 +LD+LN+ QR A ++ ++AGAGSGKTRVL+ RI +L V++C P I+A+TFT Sbjct: 5 ILDTLNENQRTAATTINEHVRIIAGAGSGKTRVLMARIVYL--VQDCGILPNRILAITFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANL---PQDFQILDSEDQL 120 NKAA EM+ R+ +G+ + + T H L R+LR DA+L P+ F I+D EDQ Sbjct: 63 NKAANEMKTRLTAQLGSMTSVVRISTIHSLCVRMLRE---DADLIGYPKTFAIMDPEDQK 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 +LK + K + +D+ +A+ I++ K + P + + V T K+Y Y+ Sbjct: 120 AILKPIYKTLEVDKTTISYNRALGAISAYKTNYIDPQMAANMAMDDVSITLAKIYAGYEA 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + +DF +LLL H L + + + ++ R I VDEFQD + IQY I+LL G Sbjct: 180 RRNEMKAMDFDDLLLEGHRLLNSVSSVKEKWQNRLDYIHVDEFQDVDPIQYGIIKLLTGK 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQ+IY WRGA V+ I +F DF +T+ L +NYRST IL A+NA+I+ Sbjct: 240 NTHLCVVGDPDQTIYTWRGASVDIILKFNKDFEPCKTVILNENYRSTQPILDASNAVIKY 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R+ K L+T E I+++ + +E FV +I G + AILYRSN Sbjct: 300 NKERIDKDLYTKLPGDEKITMFEGKEDSEEPIFVARQINEKHKKGLEYKDMAILYRSNYS 359 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND--------DAAFERVV 411 SR E +PY IYGG+RF+ERQEIKDAL YLRL NRN+ D A RV+ Sbjct: 360 SRAFERIFKSVGIPYVIYGGIRFYERQEIKDALCYLRLCTNRNEEDPDQMALDLAVLRVI 419 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 N P RGIG RT++ +++ + +R + L+ ++ + L+ + F++LI+ L + Sbjct: 420 NVPRRGIGARTIENLQKQAAERHMNLYDVMKDPI---GLSTAVTKKCEMFVDLIEDLREN 476 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 L D V+ +G +M ++++ E GQ RI+NL+EL Q S E+ E M L Sbjct: 477 REHYALEDFLDYVLDTTGYISMLKEDR-ESGQDRIDNLKELKEDIAQ-SMIEDPE--MTL 532 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 +++L AL + Q +T ++ V LMT+H+AKGLEF VF+V +G+FPS + DEGG Sbjct: 533 ESYLQDIALFTDKTQ-ETSENTVSLMTVHAAKGLEFDTVFLVNFNDGVFPSSRACDEGGM 591 Query: 592 --LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 LEEERRL YV +TRA + L +T+ T Y ++ + PSRF E+P E + + Sbjct: 592 KALEEERRLLYVAMTRAKKTLYITW-NTGFSYMQDAFKTPSRFRAEIPMEYIVQEEKEEA 650 Query: 650 VSRP---VSHQRMGTP--MVENDSGYKL--GQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 +P VS G P + N +L G V H +G+G ++ + G +AF Sbjct: 651 PKQPKAVVSQSLTGRPSKLGANKKKVRLRKGDAVEHTIYGQGVVLEIRGDVA----TIAF 706 Query: 703 -QGQGIKWLVAAYARLE 718 G+K L AA+ ++ Sbjct: 707 GHTIGVKKLNAAHPSIK 723 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust. Identities = 265/730 (36%), Positives = 398/730 (54%), Gaps = 41/730 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L+ LN +Q++A L V+AGAG+GKTR L RIA+L+ +P SI+AV Sbjct: 1 MKMTNWLEQLNPQQKKAATHISGPLFVVAGAGTGKTRTLTTRIAYLIEELGVAPDSILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--AHHMDANLPQDFQILDSED 118 TFTNKAA EM+ RI ++ G W+ TFH ++LR H+ +F I+D +D Sbjct: 61 TFTNKAAREMKERIVEMAGPYATNTWIYTFHAFGVKVLRRDIEHLKMGYTVNFNIIDEDD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 +++++IK +NLD K + K + +I + N E+ V + Y Sbjct: 121 AKAMVRKIIKDLNLDTKSYKANAI-----RHKISLFKHLNIDYFDNANERL---VLEKYT 172 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 L+DF +L + ++L+ HIL++Y+ +F ILVDEFQDT+++QY ++LLAG Sbjct: 173 HELITNNLLDFDDLQILTYKLFDEHQHILEYYQNKFNFILVDEFQDTDHLQYKMMKLLAG 232 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAE----TIRLEQNYRSTSNILSAAN 294 + +VGD DQSIY +RGA +N + FLNDF + I L+ NYRST IL AN Sbjct: 233 KQKNLFVVGDPDQSIYAFRGANYDNAKFFLNDFKNEDGSKAEIVLDLNYRSTKEILKFAN 292 Query: 295 ALIENNNGR-LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAI 352 LI +N R K L TD +G ++ A ++L+EA+ + N I+T +D G ++ AI Sbjct: 293 KLITSNKNRPFSKSLETDLGNGLKPFIWSAQSDLNEAQMIANEIETLIKDGGYKYSDIAI 352 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NA SR E+ ++ ++PY +YGG+ F++R+EIKD L+Y+RL+ + N D R++N Sbjct: 353 LYRNNALSRSFEDVFMKYNIPYVLYGGISFYQRKEIKDILAYIRLVVDPNLDFYLMRIIN 412 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP R IG TL+ ++ +++ ++++ A ++G+ +L F LI + + Sbjct: 413 TPRRAIGPTTLNKLQSYAKEHNMSMFDAIDSF----DISGKTKQSLLEFKTLILEMKFDF 468 Query: 473 ADMP-LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + L D V +G M E +K E + RIE ++EL Q E L L Sbjct: 469 QNFTELGKVVDYVAYKTGYNQMLETDKDEYSEERIEYIKELKNPFVQAEAYYEGTFLEKL 528 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L AL + + + DAV L T H KGLEF VF+ MEE +FPS S + Sbjct: 529 MQLLDQIALYS-DLDRNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQIFPSSQSFMDLNE 587 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE-LPEECVEEVRLRATV 650 LEEERR+AYVGVTRA ++L LT +E R LYG +Y RPSRF+ E +PE+ V Sbjct: 588 LEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKEMMPEQEV--------- 638 Query: 651 SRPVSHQRMGTPMVENDSGY-KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIK 708 + + TP S Y K G V H FG+G +V S + +AF GIK Sbjct: 639 ---FTKKGNYTPQQSTSSNYLKPGDSVTHQVFGKGIVV----SVDKDIATIAFSMPHGIK 691 Query: 709 WLVAAYARLE 718 L+ ++ ++ Sbjct: 692 QLLESHPSIK 701 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 286/804 (35%), Positives = 423/804 (52%), Gaps = 94/804 (11%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LD LN++Q AV LLV+AGAGSGKTR L HRIA L++ P I+AVTFTNK Sbjct: 8 FLDGLNNEQSNAVNHFEGPLLVVAGAGSGKTRALTHRIAHLITEYKVDPSEILAVTFTNK 67 Query: 66 AAAEMRHRIGQLMGTS-----------------------------QGGMWVGTFHGLAHR 96 AA EM+ R+ L+ +W+GTFH L + Sbjct: 68 AAREMKERLELLLAKRIAKYQLDQPWSSVSLVEQNQFRTRIYREVTKDLWIGTFHALFSK 127 Query: 97 LLR---AHHMDA---NLPQDFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYINSQ 149 LLR +D + F I D D L+K +I + MNLD K++ P++ W I++ Sbjct: 128 LLRFDIEKFVDKEGLKWTKYFSIYDETDAQSLIKEIIIQDMNLDPKRFEPKKVRWAISNA 187 Query: 150 KDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQ 208 K++G+ P QS + +VY Y++A +DF +LLL +L + Sbjct: 188 KNQGILPDQFTQSAEGQRGKLIAQVYSLYRKALAANNALDFDDLLLLPVQLLKQNEQVRS 247 Query: 209 HYRERFTNILVDEFQDTNNIQYAWIRLLAGD-----------TGKVMIVGDDDQSIYGWR 257 ++ RF ++LVDE+QDTN QY I+LL + V +VGD DQSIY +R Sbjct: 248 YWHNRFKHLLVDEYQDTNWTQYELIKLLVTNGINPSFFSSWSKRSVFVVGDADQSIYSFR 307 Query: 258 GAQVENIQRFLNDFPG-------AETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWT 310 A + F DF + ++LE+NYRSTS IL AAN+LI NN RL K L Sbjct: 308 AADFRILMGFQEDFKNKNSLQGLSNVVKLEENYRSTSTILDAANSLISNNKERLDKVLKA 367 Query: 311 DGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL--AECAILYRSNAQSRVLEEALL 368 +GE I L +E+ EA VV+R++ + + L + AILYR+NAQSRV+EE+L+ Sbjct: 368 TRGEGELIKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAILYRTNAQSRVIEESLV 427 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 + ++PY + GG+RF++R+E+KD L+YLRL+ N +D + R++N P RGIG T+ Sbjct: 428 RWNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNVPKRGIGKTTVQRFSD 487 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDS 488 S + LW+ + ++L GR+A L +F ELID L + V++ S Sbjct: 488 ASSQLGIPLWEVVSDPEAIRSLGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVMEKS 547 Query: 489 GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQAD 548 G + ++ + R NL+ELV A+ Q+ +E+ + L+ FL+ AAL + + D Sbjct: 548 GYISELIATATDEAEERRRNLQELVNASLQY---QEENEAADLEGFLATAALASDADKKD 604 Query: 549 TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 T D + LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TRA + Sbjct: 605 TAHDRITLMTLHSSKGLEFPIVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGLTRAKE 664 Query: 609 KLTLTYAETRRLYGKEVYHRP---SRFIGELPEECVE----------------------- 642 +L L +A RR++G P S F+ E+P E +E Sbjct: 665 RLFLFHATERRIWGG--MREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERRMDRLTRV 722 Query: 643 ---EVRLRAT-VSR--PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 E +L ++ +S+ P + R +++G +V H+ FGEG + ++ GSGE Sbjct: 723 DRREDQLNSSGISKNLPTNAVRRKYSGPAPGVSWEVGNKVLHSAFGEGEVTHIFGSGEKI 782 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 + + F G G K L A ++ + Sbjct: 783 SIAIKFVGMGPKILDPRLAPIQPI 806 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 272/695 (39%), Positives = 388/695 (55%), Gaps = 25/695 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SLN +Q+EAV L V+AGAGSGKTRVL RIA+LM + P I+A+TFTNKA Sbjct: 4 IQSLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM R+ LM V T H L R+LR P+ F ILD EDQ +LK Sbjct: 64 AREMETRVLSLMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKAILKEY 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN--PVEQTWQKVYQAYQEACDRA 184 K ++D+ + A+ YI++ K E + + +E+ K+Y+ Y Sbjct: 124 YKEHSVDKNEISFASALSYISNNKTENVSVEEANKIADFSSLEKKKVKIYEYYLHRQKEL 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L L+ +LQ +++ F ILVDEFQD + IQY I+ L G ++ Sbjct: 184 FALDFDDLILWTVRLFDRFEVVLQKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDNSLL 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WRGA V I F DF +TI L QNYRSTS+IL AN++I+NN R+ Sbjct: 244 VVGDPDQTIYTWRGADVRIIVNFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRV 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+L+TD E I + A ++ +A ++ +K+ + G +E A+LYR+N SR LE Sbjct: 304 DKELFTDNQSKEKIYHFSAGSDEYQAAWIAQEMKSIRLKTGTYSEMAVLYRANYLSRALE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +AL+ +PY IYGG+RFFERQ +KDALSYLRLI DD + RV+N P RG+G +T++ Sbjct: 364 KALMDERIPYIIYGGLRFFERQVVKDALSYLRLIVV-GDDLSLTRVLNRPKRGLGLKTVE 422 Query: 425 VVRQTSRDRQLTLWQACRELLQ-EKALAGRAASALQRFMELIDAL--AQETADMPLHVQT 481 ++ R R+L Q ELLQ E+ G+ +++F++ ++ Q+ + L Sbjct: 423 MI--AHRARELNCSQF--ELLQKEELFKGKTQDTIRQFVQRVERWRSLQQKGGLELFDFF 478 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS-YNEEDEDLMPLQAFLSHAAL 540 + V+ +SG R E EK + +L+ L+ R FS Y+ E L+ +L AL Sbjct: 479 ELVMDESGYRAFLE---AEKDTDNLGHLKSLMEDIRDFSRYHPE----ATLEEYLQSVAL 531 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRLA 599 G+ + D VQLMT+H++KGLEF VF+ + EG+FPS+ SL EG +EEERRLA Sbjct: 532 -YGDKEELVENDFVQLMTVHASKGLEFDTVFVSDLNEGIFPSERSLQEGYHGVEEERRLA 590 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---VRLRATVSRPVSH 656 YV TRA + L LT A + V PSRFI E+ + +E V+ + Sbjct: 591 YVAFTRARKHLYLTDAGGYSFMLQRV-KTPSRFIDEIEDLYIEHRGVVKSQEKQESSFYS 649 Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 Q M P+ E +K G + H KFGEG ++ EG Sbjct: 650 QFMEKPVREV-KKWKKGDIIEHVKFGEGVVILQEG 683 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 258/731 (35%), Positives = 414/731 (56%), Gaps = 48/731 (6%) Query: 17 AVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQ 76 AV +L ++AGAGSGKTRV+ RIA+L+ + P I+A+TFTNKAA EM+ R+ Sbjct: 14 AVTCVDRHLRIIAGAGSGKTRVVTTRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEG 73 Query: 77 LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQ 136 +G + + + T H RLLR + P++F ILD++DQ +L+ K + +D K Sbjct: 74 FLGDTAQAVMISTIHSFCVRLLREDILVHGYPRNFTILDADDQRSILRDAYKQLQVDVKT 133 Query: 137 WPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRAGLVDFAELLLR 195 + + + YI++ K + + + N E+ VY Y++ +DF +LL+ Sbjct: 134 YSYHRVLSYISNNKTNFIDANSALARANYEGERIMANVYAFYEKRLAEMFGLDFDDLLIF 193 Query: 196 AHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYG 255 + + + + ++ RFT + VDEFQD + +QY I++L + + +VGD DQ+IY Sbjct: 194 TYHILKEHVEVRKKWQRRFTYLHVDEFQDVDMLQYQIIKMLVKEDSYLCVVGDPDQTIYT 253 Query: 256 WRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG 315 WRGAQV+ I F DFP + T+ L +NYRST IL A+N LI+NN R+ K+L+T Sbjct: 254 WRGAQVDIIMNFEKDFPHSHTVILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESD 313 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYR 375 E I + A ++ +E +V +I + NG + A+LYRSN SR LE+ALL +PYR Sbjct: 314 ERIVHFTAMDDYNEPIWVAGKILSLHHNGVKYRDIAVLYRSNYLSRGLEKALLDQHIPYR 373 Query: 376 IYGGMRFFERQEIKDALSYLRLIANR--NDDA------AFERVVNTPTRGIGDRTLDVVR 427 IYGG+RF++R EIKDALSYLRL+A + DD A +R++N P RGIG +TL+ + Sbjct: 374 IYGGVRFYDRAEIKDALSYLRLLAPKVEGDDKELFKNLAVKRIINLPKRGIGAKTLETLE 433 Query: 428 QTSRDRQLTLWQACRELLQEKALA-GRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 Q + + ++ E+L++ G+A ++ +F+E+I+A + + +V++ Sbjct: 434 QEAAAKDTNMY----EILKQGGFGKGKAKESIAKFVEVIEACRSCVDTISIDQLLSKVLE 489 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 DSG M + + R+ENL+EL++ + N D L+ +L +L + + Sbjct: 490 DSGYMEML---RNDAEIERLENLKELISDIANYVENNPDGSLLD---YLQEISLYSDKED 543 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVT 604 D + VQLMT+H+AKGLEF +VF+ + +G+FP++ S++EGG+ LEEERRLAYV T Sbjct: 544 LDNGE-FVQLMTIHAAKGLEFDRVFVYSLCDGIFPNERSINEGGQQALEEERRLAYVAFT 602 Query: 605 RAMQKLTL--TYAETRRLYGKEVYHRPSRFIGELPEECVEEV--RLRATVSRPV-SHQRM 659 RA ++L L +Y + Y + SRF+ E+P++C++EV + R + + V ++Q Sbjct: 603 RAKKQLFLSDSYGYS---YVLDKLKTTSRFVKEIPQDCLQEVGAKPRNSFASDVDTYQGS 659 Query: 660 GTPMVENDSGYKL------------GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-G 706 G + N + + G V H FGEG ++ +EG +AF + G Sbjct: 660 GFSSLGNTTDEAIEHTSKKKGKIRKGDLVVHDVFGEGIVIKLEG----ELAVIAFDKKYG 715 Query: 707 IKWLVAAYARL 717 I+ ++A +A L Sbjct: 716 IRKILATHASL 726 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 273/779 (35%), Positives = 418/779 (53%), Gaps = 69/779 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN+ QR AV LV+AGAGSGKTRV+ +++A L+ + +P + A+TFTNKA Sbjct: 4 LTALNEAQRVAVVYNEGPALVIAGAGSGKTRVITYKLAHLVD-QGWNPQRLYALTFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++G + +GTFH + R+LR + QD+ I D+ D L++ Sbjct: 63 AGEMRSRVSEMLGEGIAYRLRMGTFHSICGRILRRYAPLLGYSQDYSIYDTSDTKALIRN 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH------HIQSYGN-PVEQTWQKVYQAYQ 178 IK ++L +K + P + + I+ K+ + P I+ Y E K+Y Y Sbjct: 123 CIKELDLSDKSYTPTRVLKRISDAKNMLISPQAYAANQEIRKYDTMNQEGELYKLYSLYT 182 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C + +DF +LL + L + P Q + +L+DE+QDTN Q+ R L Sbjct: 183 QRCKESNSMDFDDLLFLLNVLIRDFPEAHQEIKSGIDFLLIDEYQDTNTSQFELARHLVA 242 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D ++ VGDD QSIY +RGA++ NI F F GA+ +LEQNYRST +I+S+ANALIE Sbjct: 243 DHNRIFAVGDDAQSIYSFRGARIANILSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIE 302 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSN 357 +N R+ K+++TD +GE + LY + +EA +++ I D L++ ILYR+N Sbjct: 303 HNQQRIPKEVYTDLGEGEKLQLYHYTSSDEEATRLIDIITQRHDEEQIPLSDQTILYRTN 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR EE LL +PY IYGGM F+ R EIKDA++YL+LI N +++ A R + P +G Sbjct: 363 AQSRKFEEVLLSEGIPYVIYGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYPRKG 422 Query: 418 IGDRTLDVVRQTSRDR--QLTLWQACRELLQEKALAGRAA---SALQRFMELIDALA--- 469 IGD+T++ V ++ QL+L+ A + G + + + F+ LID+LA Sbjct: 423 IGDKTIEKVALYAQQHSPQLSLYDALCAAIDSADPVGLSRGVRNKIASFVNLIDSLASAY 482 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS--YNEEDED 527 Q A + + ++++SG+ +E + Q +++NL+E +++ +F Y ++ + Sbjct: 483 QHYAKLEEWIA--HILRESGIVAELTREDTVESQAKLDNLKEFISSASEFEARYRQDPLN 540 Query: 528 LMP--------LQAFLSHAALEAGEGQADT-------WQDAVQLMTLHSAKGLEFPQVFI 572 L L AF L + Q + QD +QLMT+H AKGLEFP V+I Sbjct: 541 LFAEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGVALQDRLQLMTIHVAKGLEFPYVYI 600 Query: 573 VGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRF 632 G+EE + PS SLD +EEERRL YVG+TRA + TL+Y R GK PSRF Sbjct: 601 AGVEENLLPSSRSLDTAEMIEEERRLLYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRF 660 Query: 633 IGELP-------EECVE---EVRLRATVSRPVSH----------------QRM---GTPM 663 I ELP EE VR A +P ++ Q+M +P+ Sbjct: 661 IAELPRAHYTLHEEAAPIGTSVRSYANSYQPTTNSQRPTATSPSASSATAQQMLAKSSPV 720 Query: 664 --VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +E+ GY +G RVRH + G+G I +E S +L + F + ++ Y L+ + Sbjct: 721 NALESLDGYHVGDRVRHPRHGDGEIQRIE-SAMGGKLTIHFDDGKTREVLIRYTHLDHI 778 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 252/641 (39%), Positives = 369/641 (57%), Gaps = 8/641 (1%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LLDSL D QR AV LL+LAG GSGKTRV+ HR+AW+++ I+A+TFT Sbjct: 20 SPLLDSLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVAWMLA-SGIPARQILALTFT 78 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ +L + +W+GTFH R+LR++ L ++F I D++D ++L Sbjct: 79 NKAADEMRGRLERL--APRQAVWMGTFHRFCARMLRSYAELVGLRENFSIYDTDDSRKIL 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACD 182 + + +D P I+ K+ + + G+ + +KVY YQ+ Sbjct: 137 QIALDEEGIDLTHTSPDAIAQAISWAKNNLVTADRYEPRRGHAIGGIVEKVYPTYQKLML 196 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 R+ VDF +LL+ L P + + ER+ I+VDE+QDTN QY +R L+ D Sbjct: 197 RSSAVDFDDLLVHVAILLKENPEVRRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHPN 256 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + + GD DQSIYGWRGA + NI F D+P + +RLEQNYRST +IL A+ LI +N Sbjct: 257 LAVTGDPDQSIYGWRGANLSNILEFEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIR 316 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA-ECAILYRSNAQSR 361 R K L+TD G + L + DEA + I G + AI YR+NA SR Sbjct: 317 RKEKDLFTDNPQGNRVRLATFPTQRDEAETIAEEIAHEVRTGKRRPRDFAIFYRTNALSR 376 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E AL + +PY+I G+ F++R+EIKD L+YL+L+ N DAA R++NTPTRGIG Sbjct: 377 QIEHALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTPTRGIGKS 436 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T+ +++ +RDR + L A R LA ++A A+ +F+ ++D + + A P+ Sbjct: 437 TIAKIQEVARDRAIPLLDAARMAGTISGLAKKSAVAVAKFVAMLDLIGTK-ATAPVEELV 495 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 V+ ++G R + E + E+ R+ NLEEL+TA +F + L+ FL ++L Sbjct: 496 GYVLTETGYREVLENSEAEEDHERLANLEELLTAASEFDLR--NPGGAGLEQFLEDSSLV 553 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 A ++ D V +MTLH+AKGLEFP V+IV EEG+ P + S + +LEEERRL +V Sbjct: 554 ADTDAFESDSDKVTMMTLHAAKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLLFV 613 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G+TRAMQ LTLT+A+ R G++ S F+ ELP +E Sbjct: 614 GITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMELPRHEME 654 >UniRef50_B7PH97 Uvrd / recb / pcra DNA helicase, putative n=1 Tax=Ixodes scapularis RepID=B7PH97_IXOSC Length = 761 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 220/467 (47%), Positives = 306/467 (65%), Gaps = 13/467 (2%) Query: 85 MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMW 144 MWVGTFHGL +RLLR H+ DA L Q FQILD+ DQL +KR++KA N+D++++PP++ Sbjct: 1 MWVGTFHGLCNRLLRMHYRDAGLVQTFQILDTADQLASIKRMVKANNVDDEKFPPKEIQK 60 Query: 145 YINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKP 204 +IN+ K++G RP ++++ +P + ++YQ YQE C+R G+VDF ELLLRA+EL Sbjct: 61 FINACKEDGQRPGDLEAH-DPHRRRLIELYQRYQEQCEREGVVDFGELLLRAYELLSRNA 119 Query: 205 HILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENI 264 I +HY+ RF +ILVDEFQDTN +QY W+RLLAGD + VGDDDQSIY +RGA V N+ Sbjct: 120 PIREHYQRRFKHILVDEFQDTNVLQYRWLRLLAGDQACMFAVGDDDQSIYAFRGANVGNM 179 Query: 265 QRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAF 324 F D+ IRLEQNYRS +IL +ANALIENN+GRLGK LWTD +GE + + Sbjct: 180 ADFERDYARGNVIRLEQNYRSCGHILDSANALIENNSGRLGKNLWTDSGEGELVRISELA 239 Query: 325 NELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFE 384 ++ EA+++V+ ++ G E AILYRSNAQSRV+E L +PY++YGG RFFE Sbjct: 240 SDALEAQWIVDEVRALIAEGKPRREIAILYRSNAQSRVIEHRLFSQGLPYKVYGGHRFFE 299 Query: 385 RQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACREL 444 RQEIK L+YLRL+ N +DD AF RVVN PTRGIG R+++ + +R+R +L +A Sbjct: 300 RQEIKHVLAYLRLMDNADDDTAFLRVVNFPTRGIGARSVEQLADLARERGTSLLRAI--- 356 Query: 445 LQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT 504 L GRAA++L RF LI +A + + L + V+ DS L Y+ ++ +G Sbjct: 357 ---PYLQGRAAASLMRFSNLIQDMASQAQILSLPELIEHVVHDSTLLAHYQADR--EGAE 411 Query: 505 RIENLEELVTATRQFSYNEEDEDLM----PLQAFLSHAALEAGEGQA 547 R+ENL+ELV A ++ + E + P+ + H +AG A Sbjct: 412 RLENLQELVNAATAYAQEQGKELFLTGAKPIACAVCHTLADAGSAGA 458 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 240/646 (37%), Positives = 368/646 (56%), Gaps = 22/646 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++QR+AV LL LAGAGSGKTRV+ RIA+L+ P I+AVTFTNKAAAE Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIK-HGVLPSQILAVTFTNKAAAE 63 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR RI +L+ + V TFH R+L+ +F I S D L++ +++ Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLIRNILRE 123 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 + ++ + WYI+ K+ ++P+ ++ + + +E+ ++VY+ YQ VDF Sbjct: 124 IKINTLNYDENLFAWYIDRFKNNLMKPYEVEPHDD-LEKIAKRVYEVYQSYLKGYNAVDF 182 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +L+ +L++ P +L Y+ERF I+VDE+QDTN QY LLA + +VGDD Sbjct: 183 NDLINLTIDLYVEFPEVLNKYQERFRYIMVDEYQDTNFAQYKLTTLLASKYRNIAVVGDD 242 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIY +RGA V NI F N++P A+ + L +NYRST IL AA+++I NN R KK+ Sbjct: 243 DQSIYAFRGADVSNILSFENEYPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVV 302 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE-CAILYRSNAQSRVLEEALL 368 +G +G P ++ +E +EA+FV + I + + E A+L+R NAQSR+ EEA Sbjct: 303 AEGEEGIPPTIMPCEDEREEAQFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFR 362 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 +PY + G +F+ER+EIKD L+YL L N D+ + RV+N P RGIG ++ + + Sbjct: 363 LRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNLNE 422 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID------ALAQETADMP-LHVQT 481 S ++L++ ++ +A + ++ F+E+ID + + + P L+ Sbjct: 423 ASIKNGVSLYETLLNYESMDDISPKAKAGIKDFLEVIDHYHNLFTVDKNALERPKLYENI 482 Query: 482 DRVIKDSGLRT--MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++ + + + E+G ++EN+E L+ ++ E+ L+ +L Sbjct: 483 NKFLDVIAYHNEILNSSDTKEQGAKKMENVESLMNGILEY---EKSNKNATLKNYLDRIL 539 Query: 540 LEAGEGQAD--TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + E Q D + + LM++H+AKGLEFP V+I GME+G+ P Q SLDE G LEEERR Sbjct: 540 LMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKSLDENG-LEEERR 598 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE----LPEE 639 L YV +TRA + LTLTY +R GK+V PS F+ E LPEE Sbjct: 599 LCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLPEE 644 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 298/786 (37%), Positives = 414/786 (52%), Gaps = 79/786 (10%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LND QR AV LLV+AGAGSGKTR L HRIA L+ P I+AVTFTNK Sbjct: 3 FLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFTNK 62 Query: 66 AAAEMRHR-------------IGQLMGTSQG----------------GMWVGTFHGLAHR 96 AA EM+ R GQ GT +W+GTFH L R Sbjct: 63 AAREMKERLQLLLAQKLAQSQFGQPWGTLPAVEQRQLRSRIEREVIKELWIGTFHALFSR 122 Query: 97 LLRAHHMDANLPQ------DFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYINSQ 149 LLR P+ F I D D L+K ++ + + LD K+ P++ W I++ Sbjct: 123 LLRFDIDKFKDPEGLCWTKQFSIYDEADAQSLVKEIVTQELQLDPKRVEPKKIRWAISNA 182 Query: 150 KDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHIL 207 K++G P ++ S G + T VY+ Y++A +DF +LLL +L + Sbjct: 183 KNQGWLPDQLEANSEGQRGKLT-ADVYRRYRKALAANNALDFDDLLLLPVQLLQQNEQVR 241 Query: 208 QHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG-------------KVMIVGDDDQSIY 254 ++ RF ++LVDE+QDTN QY I+LL TG V +VGD DQSIY Sbjct: 242 SYWHRRFRHVLVDEYQDTNRTQYDLIKLLV--TGGQDPQLYNEWNGRSVFVVGDADQSIY 299 Query: 255 GWRGAQVENIQRFLNDF-------PGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 +R A + F DF ++LE+NYRST+ IL AANALI NN+ R+ K Sbjct: 300 SFRAADFTILMGFQQDFGDQAADDATRTMVKLEENYRSTATILEAANALIANNSERIDKV 359 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA--ECAILYRSNAQSRVLEE 365 L +GE ISL +E+ EA VV+R++ L+ A+LYR+NAQSR +EE Sbjct: 360 LRPTRGEGELISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVLYRTNAQSRAIEE 419 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 +L++ +PY + GG+RF++R+EIKD L+YLRL+ N D + RV+N P RGIG T+ Sbjct: 420 SLVRWRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVPRRGIGKTTIQR 479 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + LW + ++L GR+A L +F ELI+ L ++ P +V+ Sbjct: 480 LNDAANQLAIPLWDVVSDGEAVRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVL 539 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 + SG E ++ + R NL+ELV A Q+ E+ D L+ FL+ AAL + Sbjct: 540 EKSGYLRELITEATDEAEERRRNLQELVNAALQYQEENEEGD---LEGFLASAALASDAD 596 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 DT D V LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TR Sbjct: 597 SKDTAADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITR 656 Query: 606 AMQKLTLTYAETRRLY-GKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM----- 659 A ++L L++A RRL+ G PS F+ ELPE V+ R+ + QR+ Sbjct: 657 AKERLFLSHASERRLWGGMREPAVPSIFLAELPEALVQGDIPRSGGAALRREQRLERLTR 716 Query: 660 -----GTPM--VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 P V + +G++V HA FGEG + + GSGE + V F G G K L Sbjct: 717 VDRAEAQPKARVSAARSWSVGEKVIHANFGEGEVTHTFGSGEKISIAVKFIGMGSKILDP 776 Query: 713 AYARLE 718 A +E Sbjct: 777 RLAPIE 782 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 255/666 (38%), Positives = 382/666 (57%), Gaps = 38/666 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L++LN +Q+ AV +L+LAGAGSGKTRVL R+A+L+ N SP +I+ +TFTNKA Sbjct: 5 LETLNPEQKHAVKLINGRVLILAGAGSGKTRVLTMRMAYLIRYLNVSPRAILGLTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAEMRHR+ + + + + TFHG ++LR F + D +D RL+ Sbjct: 65 AAEMRHRLANFVDSKLAKQVTLCTFHGFCMQILRQDIAKLGYTTKFSLYDEQDVQRLINM 124 Query: 126 LIKAMNLDEKQWPP-RQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQEACDR 183 +++ + E + P + I K++G+ P +I+ + ++ Q VY+ Q + Sbjct: 125 IVRDILQHEGELPSLTSTLNAIRHAKNKGISPENIEISESKWHNSFVQDVYRRLQASMRA 184 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF LL EL P +L+ Y+ERF +++DE+QDTN IQY LL + Sbjct: 185 YNAVDFDHLLSLTVELLERFPDVLEAYQERFRYMMIDEYQDTNPIQYRLASLLTSKYQNL 244 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIYGWRGA V+NI +F A I+LEQNYRST+ IL AANA+I++N R Sbjct: 245 CVVGDDDQSIYGWRGADVKNIL----EFEKATVIKLEQNYRSTNFILKAANAVIDHNQYR 300 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSRV 362 KKLW++ +G PI ++ NEL+EA+ VV RI +++ + AILYRSNA SR Sbjct: 301 HKKKLWSEKGEGHPIEVFHTPNELEEAQVVVKRIVKMKESLNLQWKDFAILYRSNALSRQ 360 Query: 363 LEEALLQ----------ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 E AL++ +PY I+GG F+ER+E+KD +YLRLI N D A R+VN Sbjct: 361 FETALMRQVWKFQNRWIQGIPYEIFGGTEFYERKEVKDLCAYLRLIINPADQEALLRIVN 420 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA------LAGRAASALQRFMELID 466 P RGIG+ +LD++ +R Q LW +E+ +K G+A + F LI Sbjct: 421 QPRRGIGEDSLDLLTTHNRQFQRPLWDVLKEVANQKGEGAKLIYHGKAFKGICEFTHLIS 480 Query: 467 ALAQETADMPLHVQTDRVIKDSGL-RTMYEQEKGEKGQT-RIENLEELVTATRQFSYNEE 524 + + L +I+ + + E+ K ++ + + EN++E V++ +F E+ Sbjct: 481 EAKKRFQEGNLAENLKWLIEQINYQKAIKEEVKSQQMRDFKWENIQEFVSSLAEF---EQ 537 Query: 525 DEDLMP-----LQAFLSHAALEAGEGQA---DTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 L P L+ FL + ++ Q+ + +D V L+T HSAKGLEFP F+VGME Sbjct: 538 QAQLNPDLESSLENFLGNMYVDNKFNQSTKNNRHEDRVSLLTFHSAKGLEFPVCFLVGME 597 Query: 577 EGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 + + P + S+ E G +EEERRL YV +TRA Q LT++ A+ R+ GK++ RPSRF+ E+ Sbjct: 598 DHIIPHEKSMKETG-IEEERRLMYVAITRAQQHLTISMAQQRKRMGKDMASRPSRFLFEI 656 Query: 637 PEECVE 642 P+E ++ Sbjct: 657 PKELLK 662 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 418 bits (1074), Expect = e-115, Method: Compositional matrix adjust. Identities = 285/731 (38%), Positives = 394/731 (53%), Gaps = 57/731 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q AV A L+LAGAGSGKTR ++HRI L+S +P+ I+AVTFTNKAAAE Sbjct: 4 LNPAQLAAVEAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKAAAE 63 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 ++ R+ +L+G GG+ GTFH ++ RLLR + P+ FQ++D++DQ L+KR++K Sbjct: 64 LKSRLSELIGDDGGGVVSGTFHAISLRLLRRYAEALAYPRSFQVIDADDQKALVKRILKQ 123 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT----WQKV-----YQAYQEA 180 N+ + P + +I H + G EQ W V Y YQ+ Sbjct: 124 ANIPADRLHPSFLLGWIE----------HCKHAGQTAEQAPACDWNGVDLRGLYSTYQQQ 173 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF++L+L L I + + RF +ILVDE+QDTN +Q+ W+ LL Sbjct: 174 LREHERMDFSDLILNCVLLMREHADIAEALQRRFDHILVDEYQDTNPVQHEWLTLLCAGH 233 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIYGWRGA + +I F + GA T RLE+NYRST IL ANA+I N Sbjct: 234 RNLTVVGDDDQSIYGWRGADIRHILEFERIWSGAGTHRLEENYRSTGAILDLANAVISKN 293 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K L G +E DEAR + +++ W+D G A E A+LYRSN QS Sbjct: 294 EDRHDKSLRATQEQGLLPQWQVCNDEYDEARQIGTQLQAWRDAGYAWQEMAVLYRSNRQS 353 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 LE+ L + +PYRI GG+ FFER EIKDAL+Y L+ D R+ N P RGIG Sbjct: 354 LALEQILREQGLPYRIVGGVGFFERLEIKDALAYWALLNGCGDALQLMRICNRPKRGIG- 412 Query: 421 RTLDVVRQTSRDRQLTLWQACREL-LQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 L Q + + +A L L + G A L LI +L + +P Sbjct: 413 --LKGQEQLAAQLSGSGLRAHEWLDLVAEGGVGGVAGKLAPLARLIASLRPQAGTLP--- 467 Query: 480 QTDR----VIKDSG----LRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 DR ++++SG L+ M E E +RI+N+ T R E E + P+ Sbjct: 468 --DRGLMALLQESGYLDSLQAMGELEAA----SRIDNIH---TLQRYIELTMEQE-ITPI 517 Query: 532 QAFLSHAALEAGE--GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 + A L++GE G+ D +++V LM+LH AKGLEF V + G+EEG+ P Q +LD+G Sbjct: 518 EFMDRAALLQSGEEAGRDDENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDG 577 Query: 590 -GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 + EERRL YVG+TRA + L LT A RRL+G+ Y PSRFI LP +++ A Sbjct: 578 EAGIAEERRLLYVGITRARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVA 637 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 T S M N +G V H FGEG I++ EGSG+ R+ V F+ GIK Sbjct: 638 TAS----------AMQNNSGDMGVGSNVLHPSFGEGVIIDFEGSGDAIRVTVQFRKAGIK 687 Query: 709 WLVAAYARLES 719 L+ YA L++ Sbjct: 688 RLMLKYAALQA 698 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust. Identities = 253/643 (39%), Positives = 362/643 (56%), Gaps = 17/643 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q++AV LVLAGAGSGKTRV++++IA L+ SP I AVTFTNKAA E Sbjct: 3 LNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAARE 62 Query: 70 MRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ +G Q G+ V TFH L +L+ + + + D DQ LLK L Sbjct: 63 MKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMTLFDEHDQFALLKELT- 121 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEACDRAGLV 187 A L E + R+ + I++ K++ + P + + QT+ K Y+ Y + Sbjct: 122 ADVLKEDKDLLRELISVISNWKNDLISPKQAFALARDAKYQTFAKCYERYATQIRTYNAL 181 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L++ L+ + ++ + +LVDE+QDTN QY I+LL GD +VG Sbjct: 182 DFDDLIMLPTLLFKQNEEVRSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTVVG 241 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA+ EN+ R +DFP I+LEQNYRST IL AN LI+NN KK Sbjct: 242 DDDQSIYSWRGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDKK 301 Query: 308 LWTDGADGEPISLYCAFNELDEA-RFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEA 366 L++ GE + + A NE EA R V I + AILYR N QSR+LE+ Sbjct: 302 LFSTIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSRKTKYKDYAILYRGNHQSRLLEKV 361 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L+Q +PY+I GG FF R EIKD ++YLRL+ N++DDAAF R+VNTP R IG TL + Sbjct: 362 LMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDAAFLRIVNTPKREIGTATLQKL 421 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRF----MELIDALAQETADMPLHVQTD 482 + ++++ ++L++A E + + +A +LQ+F +EL D + + + + Sbjct: 422 GELAQEKHISLFEAIFEFELIQRITPKAYDSLQKFGRWIVELNDEIQRSEPERAVRSMLS 481 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA--- 539 + + L K + Q++ N+ L +E + M L ++ Sbjct: 482 AIHYEEYLYEYATSPKAAEMQSK--NVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRD 539 Query: 540 -LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 LE GE D+ D VQLMTLH++KGLEFP V+++GMEEG+ P Q S+DE +EEERRL Sbjct: 540 MLERGEDDDDS--DQVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDEDN-VEEERRL 596 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 AYVG+TRA ++LT + RR YG+ V PSRF+ ELP + V Sbjct: 597 AYVGITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDV 639 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 266/754 (35%), Positives = 401/754 (53%), Gaps = 51/754 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 L Q AV+ + LLVLAG GSGKTRV+ HRIA L+ + + I+ +TFTNKAA E Sbjct: 7 LTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHA-HVPAHQILGITFTNKAADE 65 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+ QL+ S+ + + TFH ++LR + L +F I D+ DQ +L++ ++ Sbjct: 66 MGERVRQLIPDSR--VEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQQQLIRFVLNE 123 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQEACDRA 184 +++D + P I+ K++ + +S G+ ++ +VY YQ+ + Sbjct: 124 LDIDTVAYNPSTIASMISRAKNDLITVDRFVEIYQESVGDHLQAVAARVYPMYQKLLLES 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +LLL L P + ER+ ILVDE+QDTN QY I L+ +T + Sbjct: 184 NAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIIMGLSLNTRNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 + GD DQSIYGWRGA++ENI +F DFP +TIRLEQN+RST IL A+ LI +N R Sbjct: 244 VTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKEILRVADDLISHNQRRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQSRVL 363 K L+T+ +G P+ L C +E EA + RI+ D G + AI YR N+ SR L Sbjct: 304 VKSLFTENEEGSPVELLCFQDERHEADDIARRIRNAVDQGKQEYTDYAIFYRVNSLSREL 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E AL + +PY++ G + F+ER E+KD LSYL+L+ N +D AF R+VN P RGIG T Sbjct: 364 ELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKPLRGIGKTTQ 423 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + +R ++L +A + L+ RAA+ + RF ++I+ + + H+ + Sbjct: 424 NKLIRWADERGISLLEAAHQAADCPKLSKRAATMVARFAKMINGFSMADSGSVAHLM-EN 482 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS--YNEEDEDLMPLQAFLSHAALE 541 +I + + +++ E Q RI N+ EL++ +++ Y EE L+ FL + L Sbjct: 483 IIDSTRMVDSWKESPDEADQQRIANVNELLSTAKKYDDIYGEE----TTLEGFLEVSTLA 538 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLA 599 + Q DT V LMTLH+AKGLE+P VFIVG+E+ + P + L E R LEEERRL Sbjct: 539 SATDQLDTDAGRVTLMTLHAAKGLEYPVVFIVGVEQNLIPHERVLREEFRDGLEEERRLF 598 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP------------------EECV 641 +VG+TRA Q L LT R + G+ S F+ E+ +E V Sbjct: 599 FVGITRAEQNLYLTQTRERSMRGRPWRTITSDFLKEIDVEFNDQSTDELFESRSHFDEFV 658 Query: 642 EEVR---------LRATVSRPVSHQ-----RMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 E V+ A RP+ + E G+ +G RVRH ++G GT++ Sbjct: 659 ESVKRGEIDTAALKAANPERPLLMTGADLLKDAPQAAEIPQGFSVGMRVRHPRYGVGTVM 718 Query: 688 NMEGSGEHSRLQVAF-QGQGIKWLVAAYARLESV 720 + G + V F + VAA+ L+ + Sbjct: 719 GISGFARKRMVNVLFDDADEPQTFVAAHCPLQPL 752 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 278/788 (35%), Positives = 416/788 (52%), Gaps = 74/788 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN-CSPYSIMA 59 M + YLL SLN Q+EAV L++AGAG+GKT+ L RIA L +EN +P I+A Sbjct: 1 MSIDYLLQSLNPMQQEAVLHQNGPCLIIAGAGTGKTKTLTTRIAAL--IENGVNPNRILA 58 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 VTFTNKAAA+MR R+ L G +W+ TFH RLLR + L +DF I D +Q Sbjct: 59 VTFTNKAAAQMRERVEALAPGQSGRVWIHTFHSFGVRLLRQNAHLLKLTKDFAIYDESEQ 118 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVEQTWQ--KVYQ 175 +++ +++ M + + Q + I+ KD+ + P I + + ++ + +VY+ Sbjct: 119 KKIITLVLQEMGQKDAKKEINQYISLISRAKDDMIDPESFAISALASNIDFKIRAAEVYK 178 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ + AG +DF +LL++ EL N + ++Y+ F +ILVDE+QDTN+ QY R Sbjct: 179 RYQNKLNAAGALDFGDLLVKTAELLKNNEDVREYYQNIFQHILVDEYQDTNHTQYIITRT 238 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA + +VGD DQSIY WRGA + NI F DFP A+ I LEQNYRST IL ++N Sbjct: 239 LAYKHRNLCVVGDPDQSIYSWRGANIRNILEFEKDFPDAKIITLEQNYRSTQIILDSSNK 298 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI+ N R K L+++ GEPI + E +EAR+ I ++G +L + A+ YR Sbjct: 299 LIKKNKKRKDKSLYSNKTSGEPIEVRELLTEGEEARWTAQNIANLIEDGASLNDIAVFYR 358 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSR E+ + +PYR+ G +RF++R+EIKD L Y R++ N D + R++NTP Sbjct: 359 TNAQSRNFEDNFRKYQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSLLRILNTPK 418 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 RGIG + + + ++L+QA + + L A A Q F+ L+D L E Sbjct: 419 RGIGKTAEEKFLEYANLHNISLYQALQRSAFVEGLTPTARRAAQEFINLMDTLRLELKVT 478 Query: 476 PLHVQTDRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQ 532 ++++ SG E EK + R++NL+ELV A +++ E L Sbjct: 479 SPTDIVNKILTLSGYWKAVEDEVEKDLEAGARLDNLQELVNAVKEYEERMARTEREASLS 538 Query: 533 AFLSHAALEAG-EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 F+ +L G + + D+ AV LMT+H AKGLEFP VF+ G+EEG+FP +S + Sbjct: 539 DFVQEISLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLFP--LSSKDDDD 596 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI---GELPEECVEEVRLRA 648 LEEERRL YV +TRA +L +TY TRR++GK + PSRF+ G + EE + ++ Sbjct: 597 LEEERRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNLPSRFLFESGLITEEQEGPLNRQS 656 Query: 649 TV-------------------SRPVSHQRMGTPMVE---NDSGYKL-------------- 672 TV +RP P + ++ GY++ Sbjct: 657 TVMPNYGGYKTKYGSKYGETQNRPSFKPFFAAPKKQKKYDEHGYEIEEQEGDYGAPIGCA 716 Query: 673 ----------------------GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 GQRVRH FG+G ++ + GSGE +++ V F + Sbjct: 717 PLGIAGENEAPAVHVSAQGPRTGQRVRHGVFGDGKVIVIAGSGEAAKITVMFANGVKRTF 776 Query: 711 VAAYARLE 718 + YA L+ Sbjct: 777 MLKYAPLQ 784 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 251/674 (37%), Positives = 366/674 (54%), Gaps = 23/674 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSP-----YSIMAVT 61 L LN QREAV LLVLAGAGSGKTRV+ HRI L+ N P +I+AVT Sbjct: 3 LSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLL---NERPGLIMARNILAVT 59 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM+ R+ + G G+ V TFH +LR P+ F I D DQL Sbjct: 60 FTNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGDQLA 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEA 180 ++R ++ +D++ + R+ + I+ K+ G P + G+ + VY YQ + Sbjct: 120 NIRRAMREHKIDDRSFDARKVLNLISKAKNSGKAPEPKPEGIGDDYDLITHMVYPDYQLS 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 G VDF +LLL L P + + Y +RF +LVDEFQDTN Q ++LLAG + Sbjct: 180 LKAQGSVDFDDLLLLPARLLREHPDLYEKYTKRFRYLLVDEFQDTNTAQLELLKLLAGRS 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V VGDDDQ IY WRGA+V NI F FPG + +RLEQNYRS +L AANA+I N Sbjct: 240 RNVCAVGDDDQCIYSWRGAEVRNILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K++WTD G + + N+ +EARFV + I+ G + + A+LYR+N QS Sbjct: 300 PERKAKQMWTDRTGGTKVKVVTCPNDEEEARFVAHEIQKHMALGISADDIAVLYRTNGQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EE L + ++ Y + GG FF+R+E+KD ++Y ++I N+ D+ + R+VN P+RGIGD Sbjct: 360 RPIEETLREKNIGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVPSRGIGD 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T++ + +R +TLW ++ + L A + + F++L++ L Sbjct: 420 VTMERLNVHARGEGVTLWTVMKKATDYEDLPPGAGARVMDFVDLVERYRAAYEHGQLANV 479 Query: 481 TDRVIKDSGLR--TMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 T +++++ G R T +++ ++ ++ + F E + +P +L+ Sbjct: 480 TRKLLEEIGFREATRAHATSATAADKKLKGVDGVLNSLENFEKREGPKASLP--TYLNRL 537 Query: 539 ALEA--GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L+ E + V LMT+H++KGLE+ VF +GMEE + P E LEEER Sbjct: 538 SLDTRQEEEEVPGANRRVTLMTVHASKGLEYRLVFFIGMEEDLMPHGGMQGEAQNLEEER 597 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RL YVG+TRA + L LT A TR GKEV PSRF+ +LP E +E V L A Sbjct: 598 RLCYVGITRAKEVLYLTRAATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAP------- 650 Query: 657 QRMGTPMVENDSGY 670 R G P E + + Sbjct: 651 -RQGPPTTEEKNFF 663 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 259/644 (40%), Positives = 368/644 (57%), Gaps = 28/644 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L+SLN +QREAV+ + LLVLAGAGSGKTRVL ++AWL++ + P+ I+AVTFT Sbjct: 5 SPVLESLNPRQREAVSYEGTPLLVLAGAGSGKTRVLTSKLAWLVAERSVPPWRILAVTFT 64 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA----NLPQDFQILDSEDQ 119 NKAA EM+ R+ ++ + TFH ++L + DA ++F + D D Sbjct: 65 NKAAREMKDRVDAMLDGGYPYGQISTFHSFGLQML-FRNRDALEARGYRRNFVVFDRGDS 123 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L L+K+ +KAM LD Q P + I+ K G P + G +E ++Y Y + Sbjct: 124 LSLVKKSMKAMKLDTSQMEPSWVLECISKAK-TGSDPVSMD--GAILEGDMAELYSLYTK 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + G DF +L++ L IL+ R+R ILVDE+QD N Q+A +RLLAGD Sbjct: 181 SLKEQGAFDFDDLIVMPLHLMSTDRDILKKERDRLDWILVDEYQDVNRPQFALLRLLAGD 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + VM VGD DQSIYGWRGA + I F FPG++ I LEQNYRST IL AAN++I N Sbjct: 241 SPNVMAVGDPDQSIYGWRGADMSVILGFERHFPGSKVILLEQNYRSTETILDAANSVIGN 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R K+LWT + GEPI++ +E EAR+V + ++ G + A+LYR NA Sbjct: 301 NVNRPEKRLWTARSGGEPINVVTLGDERAEARYVSDVVEELLSLGYRYTDMAVLYRMNAL 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR E+ ++ +PYR+ G F++R+EIKDA+SYLRL N D +A RV N P RG+G Sbjct: 361 SRNFEQEFVKRGLPYRVVKGTAFYDRKEIKDAISYLRLAVNPRDASALARVANVPPRGLG 420 Query: 420 DRTLDVVR---QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 + L+ V T T W CR L G+ ++ + +L +D Sbjct: 421 AKGLESVESYLSTHASEARTTW--CRIADGGCGLRGKGDKGIRDLARHMISLIDIGSD-- 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 L+ + ++ G + E+ ++ + R EN+ EL + + +E ED++ A + Sbjct: 477 LNRAVEYIMDVIGYGSYLEKGYPDQFEERRENVMELTSISPG---SESLEDVLAEIALYT 533 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEE 594 + + D D + L +LH+AKGLEFP VFIVGME+G+FP SLD GGR LEE Sbjct: 534 -------DQEVDDIPDGISLSSLHAAKGLEFPVVFIVGMEDGIFPHGRSLD-GGRDELEE 585 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 ERRL YVG+TRA ++L LT + RRL+G + + SRFI E+PE Sbjct: 586 ERRLCYVGMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPE 629 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 261/671 (38%), Positives = 385/671 (57%), Gaps = 49/671 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LN QR AV +L+LAGAGSGKT+VL R+A+LMS++ SP SI+ +TFTNKA Sbjct: 9 LDALNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSILGLTFTNKA 68 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAH-HMDANLPQDFQILDSEDQLRLLK 124 AAEMRHRIG + + TFH ++LRA H PQ F + D +D RL+ Sbjct: 69 AAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILRAEIHKLGYTPQ-FSLYDEKDVQRLIG 127 Query: 125 RLIKAMNLDEKQWPPRQAMW-YINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAYQEACD 182 + + + E + P + IN +++GL I G+ + + +YQ Q + Sbjct: 128 LIARDVLEHEAELPSLASTTAVINQAQNKGLASEEICDTGSEWHDEFARTIYQRLQASLR 187 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 VDF LL +L+ N P +L+ Y+ER+ I++DE+QDTN +QY LL+ Sbjct: 188 AYNAVDFNNLLGLTVQLFENFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSRKYQN 247 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIYGWRGA+V+NI DF A TI+LEQNYRST+NIL AAN +I +N Sbjct: 248 LCVVGDDDQSIYGWRGAEVKNIL----DFSDATTIKLEQNYRSTNNILKAANGVISHNQT 303 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK--------TWQDNGGALAECAILY 354 R K LW++ +G+ I ++ A ++ +EA VV RI W+D AILY Sbjct: 304 RYQKVLWSNRGEGDLIEVFHAPSDKEEAEAVVYRIAHMREKYQLKWRD-------IAILY 356 Query: 355 RSNAQSRVLEEALLQAS----------MPYRIYGGMRFFERQEIKDALSYLRLIANRNDD 404 RSNA SR+ E AL+ + +PY I+GG F+ER+E++D +YLR+IAN D Sbjct: 357 RSNALSRLFELALMNYAWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLRVIANPLDQ 416 Query: 405 AAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACREL------LQEKA--LAGRAAS 456 A R++N P RGIG+ +LD +R QL LW + L +QE + + +A Sbjct: 417 EALLRIINQPRRGIGEASLDAATAYNRSHQLPLWNVLKSLANREPAVQEVSSHWSQKALD 476 Query: 457 ALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT-RIENLEELVTA 515 +LQ F+ +++ Q + T+ + + + + ++ K + + + EN++E V++ Sbjct: 477 SLQGFIGILENSKQRFEQDFSYALTELIEAVNYKKAINDEVKSAQMRDFKWENVQEFVSS 536 Query: 516 TRQF--SYNEEDEDLMPLQAFLSHAALEA--GEGQADTWQ-DAVQLMTLHSAKGLEFPQV 570 +F S+ +E L F++ L+ + Q +T Q D V LMT HS+KGLEF Sbjct: 537 LVEFNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKNTQQKDQVNLMTFHSSKGLEFKAC 596 Query: 571 FIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPS 630 F+VG+E+ + P + SL E G +EEERRL YVG+TRA Q LT++ A R+ GKE +PS Sbjct: 597 FLVGIEDHIIPHEKSLKEVG-VEEERRLMYVGITRARQFLTISMARKRKRMGKEYASKPS 655 Query: 631 RFIGELPEECV 641 RF+ E+P+E + Sbjct: 656 RFLHEIPKELL 666 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 255/672 (37%), Positives = 370/672 (55%), Gaps = 30/672 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN QREAV +LVLAGAGSGKTRV+ +RI L+ P +I A+TFTN+A Sbjct: 6 LAKLNTPQREAVLHGSGPVLVLAGAGSGKTRVITYRIVRLLR-SGIPPQAIAALTFTNRA 64 Query: 67 AAEMRHRIGQLMGTSQGG--MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 A EMR R+ L+G + + +GTFH L R+LR+ H P+ F I D+ DQL +++ Sbjct: 65 AEEMRERVAALLGDRKTASMLTMGTFHSLGLRILRSEHEAMGYPRGFVIYDTSDQLGVVR 124 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDR 183 L++ ++ +++ R + I+ K+ + P ++ + + ++ +VY YQEA Sbjct: 125 ELLRGIDAG-RRFDVRAILTRISLAKNAFVFPEEYVPNGDDEYDEITAEVYPRYQEALRA 183 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +LL ++ + + ++E+F ++VDE+QDTN Q +++ L + + Sbjct: 184 YAAVDFDDLLTATVRMFDQRDDVRARWQEKFRFVMVDEYQDTNRAQLKFVKTLVAEHENL 243 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA NI F FPGA I+LEQNYRST IL AANA+I NN R Sbjct: 244 CVVGDDDQSIYSWRGADPTNILHFDRMFPGARVIKLEQNYRSTPTILRAANAVIANNVNR 303 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK--TWQDNGGALAECAILYRSNAQSR 361 GK LW+D ADG I A + EARFV I DN + A+LYRSN QSR Sbjct: 304 HGKNLWSDIADGAKIVHASATDTESEARFVAREIGDIVGTDN-LRYRDVAVLYRSNIQSR 362 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 ++EE+L AS+PY +YGG +F+ER+E+KD ++YLRL N+ D+ A RV+N P RGIG Sbjct: 363 LIEESLRSASIPYVMYGGQQFYERKEVKDLIAYLRLALNQRDEIALRRVINYPARGIGAT 422 Query: 422 TLDVVRQTSRDRQLTLW---QACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 TL V +R + ++W + ++ + + A++ F+ +I+ Sbjct: 423 TLKRVEDHARASRTSMWRILEGASQMAESDKMRPSTVQAIENFVAIIERTRASLDGGARI 482 Query: 479 VQTDRVIKD-----SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + R + D LR Q RI+N+E L+ + + + E+ L L Sbjct: 483 IDVTRRLIDEIQLYDDLRNA--SPSAAAAQRRIDNVESLLRSLER--HQEKRPGLGALAE 538 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ---------- 583 +L +L + + V L TLH AKGLEFP VF++G+EE + P Sbjct: 539 YLRRLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPHARTLKPQATDV 598 Query: 584 MSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 M LD + EERRLAYVG+TRA +KL LT + R GK + PSRF+ E+P E +EE Sbjct: 599 MDLDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPAELLEE 658 Query: 644 VRLRATVSRPVS 655 ++A PVS Sbjct: 659 RDIQAEERAPVS 670 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 248/666 (37%), Positives = 378/666 (56%), Gaps = 25/666 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q EAV LLVLAGAGSGKT V+ +I +L+ P+++ A+TFTNKAAAE Sbjct: 23 LNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNVGYLPHTVAAITFTNKAAAE 82 Query: 70 MRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ +++ SQ G+ + TFH L ++LR ++F ILDS D +++ L+ Sbjct: 83 MQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGELLG 142 Query: 129 AMNLDEKQWPPRQ-AMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + Q ++W + + E + +Q+ N EQ +VY +YQE V Sbjct: 143 GTGKEAVFKAQHQISLWKNDLKTPEDV----VQTASNAWEQQTARVYASYQETLQSYQAV 198 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ L + ++ R +LVDE QDTN Q+ ++LL G G VG Sbjct: 199 DFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAVG 258 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA +EN+++ ++P + I+LEQNYRST+ IL AN +IENN KK Sbjct: 259 DDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTKK 318 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG---ALAECAILYRSNAQSRVLE 364 LW+ +GEP+ + NE EA +VV++I + GG A+ A+LYR Q+R+ E Sbjct: 319 LWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYRGKHQARIFE 378 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 EAL A +PYR+ GG FF++ EIKD LSY+RL+AN NDD AF R V TP RGIGD TL Sbjct: 379 EALRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTPKRGIGDVTLG 438 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + + + + +L++A + L LQ FM++ + + + + Sbjct: 439 KLNTYAHEHECSLYEAAQNEEALATLNNTNRQHLQAFMDMFGSYRAKAETGEAGEFINSL 498 Query: 485 IKDSGLRT-MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +++ + + E+G+ G+ + N+ +LV+ + E+ ++++ L ++ L G Sbjct: 499 LEEIDYENHLMQNEEGKAGEIKWRNVSDLVSWFARKG-GEDGKNIIELAQTVALMTLLEG 557 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + + +T DAV L TLH+AKGLE+P VF+VG EEG+ P S++EG +EEERRL YVG+ Sbjct: 558 KDEEET--DAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEEGN-VEEERRLMYVGI 614 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPM 663 TRA ++LTLT+ R+ G + PSRFI E+P+E ++ + ++ G P+ Sbjct: 615 TRAKRQLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDLK-----------ILGRKGGEPI 663 Query: 664 VENDSG 669 V + G Sbjct: 664 VSKEEG 669 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 239/644 (37%), Positives = 366/644 (56%), Gaps = 14/644 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN+ QREAV LV+AGAGSGKTRVL ++IA+L++ + P++I+A+TFTNK Sbjct: 10 ILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLLN-KGLKPWNILALTFTNK 68 Query: 66 AAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ RI Q+ +++GTFH + R+LR +F I D D L+K Sbjct: 69 AAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRSLIK 128 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQAY 177 ++KA++LDEK + P +I+ K+ + +E+ +Y+AY Sbjct: 129 SIVKALDLDEKTYKPASVHNFISMAKNHLITASEYAEDRAAIERDRSARMPAIHMIYKAY 188 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + C +A +DF ++LL L+ + I + Y ++F ILVDE+QDTN Q + I LA Sbjct: 189 EARCRQANAMDFDDILLYTFLLFRDNKEIREKYGQQFEYILVDEYQDTNYAQVSIISQLA 248 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 ++ +VGDD QSIY +RGA ++NI F + F A+ +LE+NYRST I+ AAN+L+ Sbjct: 249 ETHRRICVVGDDYQSIYSFRGANIDNILDFKHKFDDAKLFKLERNYRSTQLIVQAANSLM 308 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRS 356 ++N ++ K +++ A+G+ I +++ +EA V N +K + N AILYR+ Sbjct: 309 KHNERQIPKDVFSKEAEGDKILYKPCYSDREEAMVVANELKRIKRNDDCDYGNFAILYRT 368 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSR E+ + +PY+I GG+ F++R+EIKD ++Y RL++N ND+ AF R++N PTR Sbjct: 369 NAQSRSFEDEFRKQGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYPTR 428 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA-SALQRFMELIDALAQETADM 475 GIG+ T+ + ++ ++LW+ +Q + + L F LI + A Sbjct: 429 GIGNTTIQKIIDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNVALK 488 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEED-EDLMPLQ 532 + +I++SGL + R ENLEE ++A + F S EE E+ + L Sbjct: 489 DAYELGKEIIEESGLSADIRSGSEPEDLARRENLEEFMSAMQGFVDSGREEGREENVYLT 548 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 +L AL + D V LMT+H+AKGLEFP VF+VG+EE +FPS MS + Sbjct: 549 DYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEENIFPSPMSASSKREI 608 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 EEERRL YV +TRA + LT A+ R YG PSRF+ + Sbjct: 609 EEERRLLYVAITRAERHCILTNAKNRFRYGSMQVDNPSRFLNDF 652 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 33/52 (63%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 G +G + H +FG G ++N+EGSGE+++ V F+ G K L+ +A+ + + Sbjct: 799 GLSVGVTIEHQRFGIGKVLNLEGSGENAKATVEFRNAGTKQLLLKFAKFKII 850 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 257/652 (39%), Positives = 358/652 (54%), Gaps = 24/652 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + +LN +Q+EAV LVLAGAGSGKT V+ +IA+++ I AVTFTNKA Sbjct: 1 MTTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKA 60 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ +L+ G++ G+ V TFH L ++R H F I D ED L+K Sbjct: 61 AREMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKE 120 Query: 126 LIKA---MNLDEKQWPPRQAMWYINS--QKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 ++ N D Q + N + DE L QS G EQTW V++ Y +A Sbjct: 121 IMLKDGDTNTDMIDLVQSQISNWKNGLIEPDEAL--SKAQSEG---EQTWALVFERYNKA 175 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +L+ +L+ P +L +++R +LVDE+QDTN+ QY ++ L GD Sbjct: 176 LKAYNAVDFDDLIRLPSKLFSEHPEVLNRWQQRIRYLLVDEYQDTNSSQYKVVQQLIGDR 235 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 G + +VGDDDQSIY WRGA+ EN+ DFP I+LEQNYRST+ IL AAN LI NN Sbjct: 236 GTLTVVGDDDQSIYAWRGARPENMSLLKVDFPSLHVIKLEQNYRSTARILKAANVLIANN 295 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQ 359 K LW+D GE I + E EA V I T + + A+LYR N Q Sbjct: 296 PHEFDKTLWSDLGMGETIRVIKCPTEDAEAERVATEILTQRLRRQCKFKDFAVLYRGNHQ 355 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +R++E L +PY I GG FF R EIKD + YLRLIAN DD AF RVVNTP R IG Sbjct: 356 ARLMELKLQHHQIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTPRRQIG 415 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 TL+ + + S +R ++LW AC E+ + + + +++F ++++ + Sbjct: 416 TGTLEALGRYSTERDISLWAACDEMGLQALIPKQGLERIRKFSGWLNSVRSNCHNGDPVQ 475 Query: 480 QTDRVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDL-------MP 530 +I D Q + R EN+ LV + + +E+ED Sbjct: 476 AIREMIDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDADGEERINTA 535 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 + L LE E + +T D VQLMTLH++KGLEFP VF++G+EE + P + S++E Sbjct: 536 ISKLLLQDMLERQEEEDET--DRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEEDN 593 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 +EEERRLAYVG+TRA + LT+T A TR+ +G++ PSRF+ ELP E VE Sbjct: 594 -IEEERRLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDVE 644 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 246/657 (37%), Positives = 381/657 (57%), Gaps = 27/657 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LLD LND+QR+AV LL+LAGAG+GKT V+ RIA+++ P I+AVTF Sbjct: 1 MSVLLDRLNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R G+L+G + +WV TFH ++LR + A DF + + DQ+ Sbjct: 61 TNKAANEMKERAGRLIGQKAVKDLWVSTFHSFGMKILRKYAYQAGYAPDFTLAEYGDQVG 120 Query: 122 LLKRLIKAMNL--DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L+K+ + + L D P+ + I+ K + P ++ +P EQ +Y+ YQE Sbjct: 121 LIKQGLNELGLVEDGMSQDPKAILSLISMAKAKNQVPEDLEESSDPWEQRIGGIYRYYQE 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR-LLAG 238 ++DF +LL+ L + Q +++F ++VDEFQDTN+IQ + LL Sbjct: 181 YLHALNILDFDDLLMLTVRLLQKDEKVRQLLQDKFKYVMVDEFQDTNHIQMELLHALLPK 240 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY WRGA+V NI F FPG + I+LEQNYRS + IL+AAN +I Sbjct: 241 HEPNICVVGDDDQSIYSWRGAEVANILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVIS 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEAR----FVVNRIKTWQDNGGALAECAILY 354 N+ R K LW+ GE + + +E EA+ ++N++ Q+ G +CAILY Sbjct: 301 INSQRHVKNLWSAQEGGEKLKVVACGSEEREAKAIADTILNKVNGRQNTYG---DCAILY 357 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 RSN QSR LE+A+ + +PY+I G F+ER+E++DAL++L++I N DD +F RV++ P Sbjct: 358 RSNHQSRALEDAMRRGRIPYKIIGDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVP 417 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG RT+ +R+ + + + +++ R Q GR++ AL +F ++ Q+ + Sbjct: 418 PRGIGPRTIKTLREKAVENKTSVYDLLRN-PQFMENFGRSSDALMKFNNRVEEFRQKFQE 476 Query: 475 -MPLHVQTDRVIKD----SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM 529 +PL ++ + GL MY+ E + R +N+ E++ +ED+ + Sbjct: 477 KVPLAGLVEQYFEGVGYIEGLGRMYKPR--EDAEKRYQNVLEIIHTIE--GREKEDKRCI 532 Query: 530 PLQAFLSHAALEAG---EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 PLQ +L +L + D +AV L+T+H++KGLEFP VF+ GME+ +FP + S Sbjct: 533 PLQEYLESVSLMEEYRRRQEKDEDPNAVMLLTVHASKGLEFPSVFVTGMEKNLFPHEKSA 592 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR-PSRFIGELPEECVE 642 L EERRL YV +TRA L LT+++ R+ G+ + R PS+F+GELP++ V+ Sbjct: 593 GLKA-LAEERRLFYVALTRAKSDLILTWSKMRKA-GRRMSQRMPSQFLGELPKDLVD 647 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 255/649 (39%), Positives = 365/649 (56%), Gaps = 22/649 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q+EAV LLVLAGAGSGKT V+ +IA+L+ I+AVTFTNKA Sbjct: 38 MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGIRAQYIVAVTFTNKA 97 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+G L+ +G G+ V TFH L ++R H F I D D Sbjct: 98 AREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERLGYKPGFSIFDESD------- 150 Query: 126 LIKAMNLD--EKQWPPRQAM----WYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQ 178 IKA+ D +K++ + YI + K++ + P ++ NP EQT VY YQ Sbjct: 151 -IKALLTDIMQKEYSGDDGVDEIKNYIGAWKNDLILPEEALEKARNPREQTAAIVYLHYQ 209 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 VDF +L+L+ +L+ P ILQ ++ R +LVDE+QDTN QY ++LL Sbjct: 210 RTLRAYNAVDFDDLILQPVKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVK 269 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D + +VGDDDQSIY WRGA+ EN+ + DFP + + LEQNYRSTS IL AN LI Sbjct: 270 DRAQFTVVGDDDQSIYAWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIA 329 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN K+LW++ G+PI + NE EA + I T +E AILYR N Sbjct: 330 NNPHVFEKQLWSEMGHGDPIRVIRCRNEDAEAERIAMEILTLHLRTERPYSEFAILYRGN 389 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q++++E L +PYR+ GG FF RQE+KD +SY RL+ N +DD AF RV+N P R Sbjct: 390 HQAKLMELKLQHHQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVPRRE 449 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-P 476 IG TL+ + + R ++++ AC E+ + L R LQRF +D + ++ A+ P Sbjct: 450 IGSATLEKLGNYATQRNISMYAACDEMGLAEHLDSRFHERLQRFKRWMDGIRRQCAENEP 509 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEK-GQTRIENLEELVTATRQFSYNEEDEDLMPLQAF- 534 + V V+ + + +K + R+ N+ L+ A + +E+ D+ QA Sbjct: 510 IAVLRSMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIA 569 Query: 535 -LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 L + + + + + VQ+MTLH++KGLEFP VFI+GMEE + P + S+ E +E Sbjct: 570 KLVLRDMLERQQEEEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSI-EADTVE 628 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 EERRLAYVG+TRA Q L +T+A R+ YG+ + PSRF+ ELP E +E Sbjct: 629 EERRLAYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLE 677 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 261/659 (39%), Positives = 365/659 (55%), Gaps = 32/659 (4%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ +++ LN QR A LLV+AGAG+GKTR HR+A L++ P ++M +T Sbjct: 3 DLEAIVEGLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLA-RGVPPEAVMCIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMD---ANLPQDFQILDSED 118 FTNKAA EMR R L+G + + TFH A LLR + D + F + D Sbjct: 62 FTNKAAREMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTI 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDE--------GLRPHH-----------I 159 QL LLK I N D K P +W I K+E +P H I Sbjct: 122 QLALLKEAIAERNFDLKANRPESFLWRIGRYKNELADPESLLARQPSHDLMDWSRVLEMI 181 Query: 160 QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 +S V + ++++ Y+E R +VDF +L+ ++ KP I + RFT + V Sbjct: 182 RSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRADLQRRFTYLQV 241 Query: 220 DEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 DEFQDTN Q ++LLAG VM VGDD QSIY WR A + I F FPGA TI L Sbjct: 242 DEFQDTNVAQLHMVKLLAGKRQNVMAVGDDAQSIYSWRSADIRCILEFERHFPGARTILL 301 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 EQNYRST I+ AAN LI +N G+ K+L+T +G P+ + A E+DEA++VV RI+ Sbjct: 302 EQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAETEVDEAKWVVQRIRA 361 Query: 340 WQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 + G + AILYR+ AQ R EE L +AS+PY++ GG RF++R+E++D+L+YLRL+ Sbjct: 362 GAEAGRRWGDFAILYRTTAQGRPFEEELREASIPYQVVGGPRFYDRREVQDSLAYLRLVH 421 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N D + ERV+N P RGIG+R L + + R + L A R E L AA+ + Sbjct: 422 NPRDSVSLERVLNAPRRGIGERGLQRLLALAAQRGVDLIAALRVAADEGVLQDEAAAGAR 481 Query: 460 RFMELIDALAQETADMP--LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 + + + + P +R++++SG ++E K + R E +E L+ A Sbjct: 482 QLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRSEVVESLIAAMH 541 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQAD-TWQDAVQLMTLHSAKGLEFPQVFIVGME 576 +F D L A+L H AL EGQ D + D V+L T+HSAKGLE+P VF+VGME Sbjct: 542 EFERRSPDGG---LGAYLDHLALL--EGQEDESGGDVVKLQTIHSAKGLEYPVVFVVGME 596 Query: 577 EGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 +G+ P Q +L+EG LEEERRL YV +TRA ++L LT A R G+ V PS+F+ E Sbjct: 597 QGLLPYQRALEEGN-LEEERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 247/646 (38%), Positives = 364/646 (56%), Gaps = 15/646 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 L Q EAV LL++AG GSGKTRV+ HRIA+++ P+ I A+TFTNKAA E Sbjct: 8 LTAAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAYMLQ-SGIRPWQIAALTFTNKAADE 66 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R+ L+ +Q +W+GTFH + LR + L +++ I DS D +KR I A Sbjct: 67 MRSRVN-LLAPNQP-VWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSKSAMKRAITA 124 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 + P Q I++ K+ + P + Q G + KVY YQ+ A VD Sbjct: 125 AGVSTSHTSPEQIASAISNAKNRLITPEIMAQQTGRAGDTVAAKVYPVYQQQLLTANAVD 184 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +LL L P + + E+ I+VDE+QDTN QYA +R L+ D + + GD Sbjct: 185 FDDLLFHFARLLRENPEVRSNLDEKLKYIMVDEYQDTNLAQYAIVRALSVDHPNLAVTGD 244 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DQS+YGWRGA + NI F D+P +T+RLEQNYRST IL A+ LI +N R K L Sbjct: 245 PDQSVYGWRGADLNNILDFEKDYPAVKTVRLEQNYRSTPEILRVADQLIRHNRRRKQKNL 304 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA-ECAILYRSNAQSRVLEEAL 367 +TD GE ++L + EA + + I G A + AI+ R NA +R +E AL Sbjct: 305 FTDNPTGEAVTLRQYEDGYKEADGIADEIANQMIAGNAEPRDFAIMCRMNALTRSIEHAL 364 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 +PY+I G+ F++R+EIKD L+YL LI N D AF+RV+NTPTRGIG +TL+ ++ Sbjct: 365 RNRGIPYQIVNGLEFYQRKEIKDLLAYLHLINNPRHDVAFQRVINTPTRGIGAKTLERIQ 424 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL---AQETADMPLHVQTDRV 484 + + D ++ + +A R + + L+ RA + + F+ L D L A T + L + + Sbjct: 425 RFADDHRIPMLEAARRVDEIDTLSKRAKTLVTSFIRLYDRLCIKATATLEDLLRFLIEEI 484 Query: 485 IKDSGL-RTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 + L RT EQ+ I N++E ++A +F ++ L+AFL AL + Sbjct: 485 KFVAYLERTTPEQQDNNP----IANVDEFISAAVEFDQMHPEDG--SLEAFLEQVALVSD 538 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + + V LMTLH+AKGLEFP+VFI+ +E+ + P + S ++ +LEEERRL +VGV Sbjct: 539 TDAFEDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKEDETQLEEERRLLFVGV 598 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 TRA Q L ++YA+ R G+ PS F+GELP + ++ V ++ + Sbjct: 599 TRAEQWLQISYAKLRSFRGENQPAIPSMFLGELPRDEMQVVEVKGS 644 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 237/718 (33%), Positives = 397/718 (55%), Gaps = 29/718 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN QR+ + +LVLAGAGSGKTRV+ +RI ++ +P +I+A+TFT KAA Sbjct: 2 SLNSSQRKIIETINGPILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKAAK 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+HRI ++ + + +GTFH + LLR ++ I D D ++K+++ Sbjct: 62 EMKHRISNMIDQKKLNQITLGTFHSIFSILLRKESHLLGYKSNYTIYDQRDSENVIKKIL 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + +NLD ++ I+ K+ +I N + K+Y++Y + C +A + Sbjct: 122 EDINLDI-SLSTKEIRRIISEYKNNL----YINKKNNKQSECLIKIYKSYIKRCLQAEAL 176 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF ++LL + L+ + P++L+ Y+ +F IL+DE+QDTN Q I+ LA + +VG Sbjct: 177 DFDDILLHTNHLFSHFPNVLRKYQNKFKYILIDEYQDTNLSQNTIIKSLAFQHKNLFVVG 236 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD QSIY +RGA++ NI F D+ A+ RLEQNYRST +I+ A+N +I N ++ KK Sbjct: 237 DDAQSIYAFRGAKISNILNFHIDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKK 296 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEA 366 +WT+ GE + +Y A +E +EA +V + I + + AILYR+N QS ++E A Sbjct: 297 IWTNNEKGEKVKIYSASSEKEEALYVASSIFSIIKKTKYHYKDFAILYRANMQSNIIEYA 356 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + ++PY+IYG + F +R+EI+D L+YLR+I N ND+ + R++ + +T+ + Sbjct: 357 LKEKNIPYKIYGSISFEKRKEIRDLLAYLRIIVNSNDEESLLRILKKGNK----KTIKSI 412 Query: 427 RQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 S+ ++T+++ + + + L + + L+ + I+ + T Sbjct: 413 LDLSKKIRITVYEIIKNIENYQHLLILNQKTKNKLKNLISTIEKFRKNTEKKDAFAIAKE 472 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ + L+ + K E Q + N+ V+ ++ N E + L FL + LE Sbjct: 473 IV-NFLLKEDPKNYKNENFQYILNNIFCYVSEQKKLKDNGE----ISLSGFLQYFYLEID 527 Query: 544 E--GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 E + ++ V LMT+H +KGLEF VFI+G+EE +FPS+ SLD ++EEERRL YV Sbjct: 528 EDMNHDENEENKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSSLDNQFKIEEERRLFYV 587 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 +TRA +K LTYA +R L+G+ PSRFI EL + ++ R +S ++ Sbjct: 588 ALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFID--RENQNSISSLSEKKEIN 645 Query: 662 PMVENDS----GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 +V N + +K G +V H FG G I++++ + +R++ F G K ++ +A Sbjct: 646 SLVNNKNKHYENFKAGVKVFHKNFGTGIILDLQNENKIARIK--FIKSGEKKILLKFA 701 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust. Identities = 264/644 (40%), Positives = 368/644 (57%), Gaps = 11/644 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L LN QREAVA +LVLAGAGSGKTRV+ +I L+ P I AVTF Sbjct: 1 MSAALADLNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTF 60 Query: 63 TNKAAAEMRHRIGQ-LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R+ Q L G S G+ + TFH L +LR ++F ++D D L Sbjct: 61 TNKAAREMKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLT 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 L++ L++ M QA I+ K++G P + + +++ Q+VY+ YQ A Sbjct: 121 LVRNLLREMQGPSDLAESIQAR--ISKAKNDGHGPEDM-PIRDRLDELAQRVYRPYQRAL 177 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 VD +L+L EL + ++ER +LVDE+QD+N QY ++ L Sbjct: 178 KACNSVDLDDLILLPTELLSRFAEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQ 237 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDDDQSIY WRGA +N+QR DFP I+LEQNYRST IL AAN LI +N Sbjct: 238 NLTAVGDDDQSIYSWRGAAADNLQRLAQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNP 297 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 KKLW+ +G+ I + A +E DEA VVN I + G + AILYRSN QS Sbjct: 298 HLFEKKLWSSLGEGDRIQVIVARDETDEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E AL A +PY++ GG+ FFER EI+D L+Y RL+AN +DDAAF R VNTP RGIG Sbjct: 358 RPFETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLANPDDDAAFLRAVNTPRRGIGS 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 TL+ + + ++ RQ++L+ A E ++ LA R AL+ F + ++ A+ A L Sbjct: 418 ATLETLGEHAKARQMSLFAALWE--EDLDLAERPLLALRSFGDWLNRTAEACARSELMPT 475 Query: 481 TDRVIKDSGLRTMYEQEKGEK-GQTRIENLEELVT-ATRQFSYNEEDEDLMPLQAFLSHA 538 ++++ G R E E E+ + + ENLEEL+ R + ++L L LS Sbjct: 476 LRDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLLEQEDGPKNLAELLNRLSVI 535 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 + + D +D ++L TLH AKGLEF +VF+VG+EE + P + S + ++EEERRL Sbjct: 536 HI-LERDEDDEERDVLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNS-ETPAQIEEERRL 593 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 YVGVTRA KL+L+Y R+ YG+ PSRF+ ELP E ++ Sbjct: 594 FYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLD 637 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 257/653 (39%), Positives = 371/653 (56%), Gaps = 34/653 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q+EAV R LLVLAGAGSGKTRV+ R+A L+ P I+AVTFTNKAAAE Sbjct: 5 LNPEQQEAVDTLRGPLLVLAGAGSGKTRVVTFRMANLIK-HGTQPDRILAVTFTNKAAAE 63 Query: 70 MRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+HR+ L+ T S+ V TFH RLLR H P+ F I D DQ L + +++ Sbjct: 64 MQHRLSALLKTKSKIKPQVSTFHSHCVRLLRRHARVLGYPEKFAIYDRGDQESLARGVLR 123 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDRAGLV 187 + + P + I S K G+RP + + E Y+ YQ+A AG V Sbjct: 124 DIRVPSDLMRPGDLVTQIGSWKTLGIRPQEAERLASTDKEHLAASGYKKYQKALRHAGAV 183 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL+ EL+ P + Q +F ++LVDE+QDTN +QY IR LA + + +VG Sbjct: 184 DFDDLLMLTEELFKIAPQVRQQEARQFDHLLVDEYQDTNGLQYRIIRALADEHRNICVVG 243 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA+V++I +F ND+P A+ +RLE NYRSTS IL AN LI N R K Sbjct: 244 DDDQSIYGWRGAEVKHILQFKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDKV 303 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLEEA 366 L A GE + +E++EAR VV I +D + AIL+R+N Q R +E Sbjct: 304 LKAARAGGERPRIEQYPSEVEEARQVVADIAFRLKDGTRDPRDFAILFRTNEQPRAIETE 363 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L +A +PY + G FF+R+E++D L+YLR I + D+ + R++NTP RGIG+R+++ V Sbjct: 364 LRKAKLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPPRGIGERSVETV 423 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRA----------ASALQRFMELIDALAQETA-DM 475 + T+W L + L G A +A++ F LI ++ TA Sbjct: 424 LSEAVRSGKTVWDVVSNLSEGPTLFGDAEKTTTLSDKNVAAIRSFSNLIQRYSEATARGD 483 Query: 476 PLHVQTDRVIKDSGLRTMYEQE------KGEKGQTRIENLEELVTATRQFSYNEEDEDLM 529 L T ++I ++G YEQE E+ Q R+ +EE+V + + E +E+ Sbjct: 484 SLAELTRKLISETG----YEQEVRRIYPDPEEQQMRLAAVEEVVNSVAAY---EAEEEKP 536 Query: 530 PLQAFLSHAAL---EAGEGQADTW-QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 + +L L E G+ + ++A+ LMTLH++KGLEFP V+++G+E+G+ P S Sbjct: 537 SISGYLDQVTLGQREMGDDKEKQLARNAIALMTLHASKGLEFPHVYMIGLEDGILPHSRS 596 Query: 586 L--DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 + D +++EERRL YVG+TRA ++LTL+ A TR +GK PSRF+ E+ Sbjct: 597 VKADSQDQIDEERRLCYVGITRAQERLTLSLALTRMKWGKPRDTTPSRFLFEI 649 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 252/671 (37%), Positives = 360/671 (53%), Gaps = 29/671 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD S L LND Q+EAV L+LAGAGSGKTRVL +IAWL+ + P+ I+AV Sbjct: 19 MDESAWLKGLNDAQKEAVVYLGKRQLILAGAGSGKTRVLTRKIAWLIDAQRVKPWRILAV 78 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLL---RAHHMDANLPQDFQILDSE 117 TFTNKAA EM R+ +G + G+ V TFH ++L RA P + D Sbjct: 79 TFTNKAAREMLDRLTASLGENLAGLQVRTFHSFGLQMLFRSRAQLEQLGYPPQCVVYDRA 138 Query: 118 DQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQA 176 D L K +++A+NLD +Q+ P + I+ K+ G + ++ N P++ +Y+ Sbjct: 139 DSLSAAKAVLEALNLDPEQYTPAWVLETISKAKNSG---AGLGAFDNSPMKSIVGPLYER 195 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y G DF +L+ EL P + + ++ +LVDE+QD N QY +RLL Sbjct: 196 YDGLLKSRGAWDFDDLIALPLELLTRFPEVKEREQKALDWVLVDEYQDVNAAQYRLMRLL 255 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + VGD DQSIYGWRGA + I F DFPGA + LEQNYRST IL AAN+L Sbjct: 256 ASGGANLTAVGDPDQSIYGWRGADMSMIMNFERDFPGASVMLLEQNYRSTGGILEAANSL 315 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I +N R K LWTD G ++ DEA + I+ + +G ++ AILYR Sbjct: 316 ISHNFDRREKNLWTDREQGAKPQVWNCPTSDDEAELITTEIERFLSSGYRASDVAILYRM 375 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NA SR +EE+LL ++PY++ G FF+R+E++D LSYLRL N D A+ +RV N PTR Sbjct: 376 NALSRRIEESLLSHNLPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLDRVGNLPTR 435 Query: 417 GIGDRTLD-----VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 G+G R+LD ++ + D +W A + E L+G+ A+ ++ + + Sbjct: 436 GLGPRSLDKLDAYLLSHRTAD-PADVWAAVAQTGAE--LSGQGAAGARQLAGAMGEILGC 492 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 D L D ++ G T+ ++ + R +N+ E+++ D D +P Sbjct: 493 GGD--LKRALDVILMRIGYETVLQKIDPAGWEDRYDNVMEILSLA-------GDGDSLP- 542 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L+ AAL + D+ + L TLH AKGLEFP VF++G+EEG+FP S D+ Sbjct: 543 -ELLAQAALYT-DADRDSGGQGINLSTLHGAKGLEFPLVFMIGLEEGIFPHSRSSDDPAE 600 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 +EEERRL YVG+TRA ++L LT RRL+G RPSRF+ E+ + +E Sbjct: 601 IEEERRLCYVGMTRAQERLILTRVRERRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEV-- 658 Query: 652 RPVSHQRMGTP 662 RP R P Sbjct: 659 RPSVGYRFNRP 669 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 250/645 (38%), Positives = 354/645 (54%), Gaps = 20/645 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LLD L Q AV LLVLAG GSGKTRV+ RIA L+ P I+A+TF Sbjct: 1 MTQLLDDLTPSQAAAVEHFEGPLLVLAGPGSGKTRVVTRRIARLIE-RRVHPAEILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM R+ L+ + + V TFH R+LR + L +F ILD +DQ Sbjct: 60 TNKAAREMAERVEHLIPGRR--VAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAA 117 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAY 177 LK +K D + P + W I K+E + P + G ++ K Y Y Sbjct: 118 LKEAVKEEGFDPTHYSPSRIGWRIGQLKNECISPGMFAQQAGERVGTHLDSVVAKAYGRY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ A VDF +LLL + P++ Q ER+ ILVDE+QDTN QY + L+ Sbjct: 178 QQILLDANAVDFDDLLLHVVTILKENPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALS 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + GD DQSIYGWRGAQ+ENI RF DFP + +RLE N+RST IL+AA+ LI Sbjct: 238 QNEPNLCATGDPDQSIYGWRGAQIENILRFERDFPRVKMVRLEDNFRSTPEILAAADDLI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRS 356 +N R K L T G P+ + + EA + I+ +G ++ AI YR Sbjct: 298 RHNTQRKAKSLRTSNPSGLPVEIRQYADGFQEADSLAAEIRERVASGERQYSDFAIFYRV 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N+ SR +E AL +A +P+ I GG+ F+ER E+KD ++YLR+I N +D AF R+VNTP R Sbjct: 358 NSLSRSIETALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPVR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG + + + + + R L LW A ++ L +A +L+ F L+D LA+ + P Sbjct: 418 GIGKNSQEKLDRWASARNLNLWDAVHQIDASIGLPKKAEYSLKLFANLLDELARRSHG-P 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM---PLQA 533 + + +++ +G + E+ R N+EELV + RQF D+D + L Sbjct: 477 IAELLEVIVERTGYLQNLSGLEPEEYANRKANVEELVASARQF-----DQDHVEGGSLSE 531 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--R 591 FL +L D VQLMTLHSAKGLEFP V++VG+E G+ P + SL EG + Sbjct: 532 FLETCSLVQDADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLREGDPLQ 591 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 +EEERRL +VG+TRA ++L LT+ R +G+ + S+F+ EL Sbjct: 592 IEEERRLLFVGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTEL 636 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 242/642 (37%), Positives = 362/642 (56%), Gaps = 19/642 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN+ Q AV AP S +LVLAGAG+GKTRV+ RI L+ E +P I+AVTFTNKAA E Sbjct: 6 LNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIK-EGIAPREILAVTFTNKAAKE 64 Query: 70 MRHRIGQLMGTSQGG--MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 ++ RI G V TFH L +LR N +F I D D +LLK+ + Sbjct: 65 LKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQALNRENNFIIYDQSDTDKLLKQCL 124 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRAG 185 + NL K+ ++I+ K+ L P + + Y +PV +Y+ YQ+ Sbjct: 125 QKFNL--KKTLSSSIQYHISQAKNRLLYPEDLDPEEYVDPV----VSIYKEYQQRLKETN 178 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DF +LL +L+ + P + + Y E + +L+DE+QDTN+ QY + +AG + Sbjct: 179 ALDFDDLLFLTVKLFKDFPEVKKEYSELWKALLIDEYQDTNHAQYMMAQTIAGKHQNIFA 238 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGD DQSIY WRGA + NI F D+P A +RLE+NYRS NIL+AANALI+NN RL Sbjct: 239 VGDPDQSIYSWRGANIHNILNFEQDYPQARVLRLEENYRSYGNILNAANALIQNNASRLK 298 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLE 364 K L + GE I ++ + DEA FV + I + + + L + I YR+N QSR E Sbjct: 299 KNLRSVKGPGEKIRVFLGKTDKDEAEFVASEIYRLHKRSNIPLRDFCIFYRTNFQSRTFE 358 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +ALL+ +PY I GG+ F++R+EI+D L++LR+ + D AF+R VN P RG+G + Sbjct: 359 DALLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKCDVVAFDRTVNLPKRGLGPSAIS 418 Query: 425 VVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + L + +ACR L+ + L+ + L ++ + L + +PL+ Sbjct: 419 SLIDYALTNNLPILEACRNALETHSVKLSKKQQEGLWSYLSIFQQL-ERAYTLPLNEFVI 477 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 I+ +G + +E + + R NL+EL A++ F + +++ + L++FL AL++ Sbjct: 478 ATIRITGYLQVL-KEDPDTFEDRKSNLDEL--ASKTFEWEQQNTE-GTLESFLDDLALKS 533 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 + + D V LMT+H+ KGLEF F+VG+EE +FP S LEEERRL YVG Sbjct: 534 STDETELIADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANSKGNYENLEEERRLCYVG 593 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 +TRA L LT A+TR L+G +PSRF+ E+P + + +V Sbjct: 594 ITRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDYLIQV 635 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 255/681 (37%), Positives = 369/681 (54%), Gaps = 53/681 (7%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + L L +Q EA +AP + ++VLAGAG+GKT L + ++VE S I+AVTFT Sbjct: 63 TVLTQGLTPRQIEAASAPGA-VVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTFT 121 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA+EM RI + W+GTFHGL R LRA A L +F+ILD++D RL+ Sbjct: 122 NKAASEMSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRLI 181 Query: 124 KRLIKAMNLDEKQW-------PPRQAMWYINSQKDEGLRPHHIQSY-----------GNP 165 KR+++++NL+ + P ++ + I+ KD L P +Y G P Sbjct: 182 KRIMQSLNLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQKKIAEANAIGEP 241 Query: 166 VEQT----WQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDE 221 + ++Y YQ+ DF +LLL L + RF IL DE Sbjct: 242 IHPASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRDAAYRTRWARRFDCILADE 301 Query: 222 FQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 +QD N QY W+R LA + ++ VGDDDQ+IYGWRGA + I+RF DFP A IRLE+ Sbjct: 302 YQDVNYAQYQWLRALAFEHHRIFCVGDDDQAIYGWRGADITYIRRFTQDFPQASVIRLEE 361 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELD-EARFVVNRIKTW 340 N+RST IL++ANA+I + RLGK L+T+ G+PI + A+ D EA +V IK Sbjct: 362 NFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEV-VAYRYCDGEAHGIVEEIKKR 420 Query: 341 QDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA- 399 G AE AILYR+N SR EE L++A +PY I G + F++R EIKD L++LR+ Sbjct: 421 HAEGVDFAEMAILYRNNFFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTLAFLRIATT 480 Query: 400 --NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASA 457 +R D A RV+N P RG G + + ++ + + R L+L++A ++ L+ A Sbjct: 481 PDDRQSDEALRRVINEPRRGFGKKAMAILEEEANFRHLSLFRA----IETATLSSACRKA 536 Query: 458 LQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 F+ I+ +A++ + + L Q ++ +G R M + K E G+ R+EN+ EL+ Sbjct: 537 GLMFVAAIEKVAKDPS-LTLADQLSLLLDATGYRAMLQASKAEDGKARLENISELLHLAG 595 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEE 577 F E L HAAL A + + ++LMTLH +KGLEF VF+ G E+ Sbjct: 596 SFHDAHE---------LLDHAAL-ASSRPNENEEGRLKLMTLHKSKGLEFEHVFLPGWED 645 Query: 578 GMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 G+FP+ S L+EERRLAYV +TRA ++ +TY E RR PS FI ++P Sbjct: 646 GIFPAGNS-----DLDEERRLAYVAITRAKRRAAITYCEYRRGLAD-----PSSFIADIP 695 Query: 638 EECVEEVRLRATVSRPVSHQR 658 + E LR PV +R Sbjct: 696 PQHRIEGWLRDDGLPPVQRER 716 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust. Identities = 217/522 (41%), Positives = 310/522 (59%), Gaps = 8/522 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN +QREAVA S LL++AGAGSGKT VL RIA+ ++ P ++A+TFTNK Sbjct: 22 LLTGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFTNK 81 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ ++G + MWV TFH R+LR + +F I DS+D RL+ + Sbjct: 82 AAKEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLVSQ 141 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDRA 184 ++K + +D K++ PR + I++ K++ P I NP ++ V++ Y A Sbjct: 142 ILKELGIDTKKYTPRSMLHRISNLKNDLQTPDDFIPRANNPADEVLADVFKRYTSRLRLA 201 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG--- 241 DF +L+ L+ P + YR RF +ILVDE+QDTN QYA I+ LAGD Sbjct: 202 NAFDFDDLISETVHLFGAFPEVADFYRRRFRHILVDEYQDTNPAQYALIKALAGDGAGGA 261 Query: 242 ---KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 ++ +VGD DQSIY +RGA V NI F DFP AETI LEQNYRST NIL AANA+I Sbjct: 262 TGAELTVVGDSDQSIYAFRGATVRNIMEFEKDFPNAETILLEQNYRSTQNILDAANAVIS 321 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSN 357 NN R KKLWT GE I + A NE EARF+V+R+ DN + A+ YR+N Sbjct: 322 NNQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIVDRVDELIDNEKYTYGDFAVFYRTN 381 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR +E+AL+++ +PY++ GG RF+ER+EIKDAL+YLR++AN +DD R++N P R Sbjct: 382 AQSRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLRVVANPDDDVNLRRILNVPKRS 441 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGDRT +V + ++ + A L + L+ RA +++ +F +L+ LA PL Sbjct: 442 IGDRTEGIVADFADREGISFYTALGRLDEIVHLSARAKTSVAKFYDLMRDLAATAEAAPL 501 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF 519 + +++ SG ++ + ++R++NL ELV F Sbjct: 502 SRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAEDF 543 Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 76/113 (67%), Gaps = 1/113 (0%) Query: 531 LQAFLSHAALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 ++AFL AL + Q D V LMTLH+AKGLEFP VF+ G+E+G FP S + Sbjct: 611 IEAFLEQVALASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGGFPHARSFENP 670 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 L EERRLAYVG+TRA Q+L +T AETR ++G+ Y+ PSRF+ E+PE +E Sbjct: 671 SELSEERRLAYVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPESLIE 723 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 250/657 (38%), Positives = 370/657 (56%), Gaps = 12/657 (1%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q++AV LVLAGAGSGKTRV+ ++IA L+ V I AVTFTNKAA E Sbjct: 54 LNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRVCGYQARHIAAVTFTNKAARE 113 Query: 70 MRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ Q +G + G+ + TFH L +++ + + +F + D +DQL LL L + Sbjct: 114 MKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKSNFSLFDDQDQLALLTDLTE 173 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRAGLV 187 L++ + +Q + I++ K++ + P + E+ + Y Y ++ Sbjct: 174 RW-LEKDKTQLQQLIATISNWKNDLIDPAQAAAQARSARERLFADCYGLYDTQLKSCNVL 232 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+L L P + + +++R +LVDE+QDTN QY ++LL G + +VG Sbjct: 233 DFDDLILLPTLLLRRDPEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVG 292 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA+ +N+ DFP + ++LEQNYRS+ IL AAN LI NN K+ Sbjct: 293 DDDQSIYSWRGARPQNLVLLKEDFPALQVVKLEQNYRSSQRILKAANILIANNPHVFEKR 352 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEA 366 L+++ GEP+ + A NE EA VV + + A ++ AILYR N QSRV E+ Sbjct: 353 LFSELGYGEPLKVITANNEDHEAERVVGELIAHHFIHKTAYSDYAILYRGNHQSRVFEKM 412 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L+Q +PY+I GG FF R EIKD LSYLR++ N +DD+AF R+VNTP R IG TL + Sbjct: 413 LMQNRIPYKISGGTSFFSRAEIKDLLSYLRVLTNPDDDSAFLRIVNTPRREIGPSTLQKL 472 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 + R ++L++A ++ E+ L+GR ++LQ F +D L++ D + Sbjct: 473 GAWANQRGISLFRASFDVGLEQTLSGRGLASLQHFTRWMDELSRLCERDATAAVRDLIHG 532 Query: 487 DSGLRTMYEQEKGEK-GQTRIENLEELVT-ATRQFSYNEEDEDLMPLQA---FLSHAALE 541 + E + + R++N+ +L T ++ DE + Q F +E Sbjct: 533 IDYESWLCETSASPRAAEMRMKNVNQLFGWMTDMLQGSDLDEPMTLTQVVNRFTLRDMME 592 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 GE + + D VQLMTLH++KGLEFP V++VGMEEG+ P Q S+DE ++EERRLAYV Sbjct: 593 RGESEEEA--DQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDEDN-VDEERRLAYV 649 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 G+TRA + L T RR YG+ + PSRF+ ELP++ + R VS QR Sbjct: 650 GITRAQKALVFTLCRERRQYGELMRPEPSRFLLELPQDDLSWESARKVVSPQERMQR 706 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 235/638 (36%), Positives = 358/638 (56%), Gaps = 10/638 (1%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN Q+ AV L+LAGAGSGKT+V++++I +L++ P +I AVTFTNKAA Sbjct: 2 SLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAY 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ + + + + + TFH L +++ L +F +LD +DQ+ LLK++ Sbjct: 62 EMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALELNNNFTLLDEKDQILLLKKIC 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRAGL 186 K + Q ++ + I+ K++ L P +Q E+ + VY+ Y +A + Sbjct: 122 KKEIKNNIQLL-KKLNFMISYWKNKFLTPLQVQLLAKSSQEKDFAYVYEQYTNYLYKANI 180 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L+ L N I ++++ + +LVDE+QDTNN QY I++LA +V Sbjct: 181 LDFDDLICMPTLLLKNNKKIKIRWQKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTLV 240 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA +NI DFP + I++E NYRS+ IL AAN+LI NN L K Sbjct: 241 GDDDQSIYSWRGANPQNIFLLKKDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEK 300 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNAQSRVLEE 365 KL++ G I + NE +EA+ +V +I + + + AILYR N QSR+LE+ Sbjct: 301 KLFSQLKYGNLIKVLIGKNEENEAQKIVKKIISQYAKKKIKYRDFAILYRGNYQSRILEK 360 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 AL++ ++PY I FF R EIKD LSYLR++ NR+D+ AF R+VN P+R IG TL Sbjct: 361 ALIKENIPYNISEKSSFFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIPSRQIGKTTLKK 420 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + + ++L+QA + +K L ++ F+ I+ + P ++ D ++ Sbjct: 421 LEEWANKKHVSLFQASNNIEIKKFLNENTIKKIKNFISKIEKFTAWSCLKPSNI-IDDIV 479 Query: 486 KDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE-- 541 D + + K + I N+ L + ++ E M L ++ + Sbjct: 480 DDLEYEKWLSKFLKDPNKIKNSINNVHTLSQWFKNMIKGDDFEKPMTLFQIVTRMTIRDI 539 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + QD VQLMTLH++KGLEFP VFI+GM EG+ P+Q S+D +EEERRL YV Sbjct: 540 LDDNIIKEQQDRVQLMTLHASKGLEFPAVFIIGMCEGILPNQKSIDNDN-IEEERRLTYV 598 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 G+TRA ++L TY R YG+ + PSRF+ ELP+E Sbjct: 599 GITRAKKQLFFTYCYKRTQYGQILDMLPSRFLFELPQE 636 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 231/648 (35%), Positives = 376/648 (58%), Gaps = 26/648 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L+++++ QRE + S LL+LAGAGSGKT V+ +IA+L++ +P +IMAVTFTNK Sbjct: 3 ILENVSEVQREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAVTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+ L+ + +++ TFH R+L+ + +F ILD D+ ++K Sbjct: 63 AAHEMKERVCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDKASVIK 122 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQK---DEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 R++K + K + +I++ K D+G+ ++ VY+ Y E Sbjct: 123 RIMKEEEV-PKSIGQKIITRFISNVKNGMDDGIVFDR---------DIFENVYKKYTEYE 172 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT- 240 ++DF +L+L +L+ + +L +YR RF ILVDEFQDTN QY I+LL D Sbjct: 173 FNENVMDFDDLILNTIKLFEQENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQDAE 232 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY +RGA V NI F D+P + +RLE+NYR +I+ AA ++I+NN Sbjct: 233 NDLTVVGDDDQSIYAFRGADVLNILDFEKDYPNTKIVRLEENYRCPKDIVEAALSVIKNN 292 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + R K ++++ + I + +++L+EAR VVN I++ DNG + +L+R+N+QS Sbjct: 293 SNRHEKNVFSNKPNEFKIENWICYSDLEEARSVVNEIESLFDNGFEARDIVVLFRTNSQS 352 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ L S+ Y+I GG+ FFER EIKD++S+LRL+ D+ + R +N P RGIG+ Sbjct: 353 RAYEKELRLHSINYKIVGGVGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPPRGIGE 412 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD------ 474 ++ + + R+LTL+ A + + E L+ +A ++ + +I+ A + + Sbjct: 413 KSFNNFETFANSRKLTLYNAI-DYIDESGLSKKAILNIKAYKNIIEEYAVKIKEDIINED 471 Query: 475 -MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + + + +KD ++++ + E+ T EN++EL + E + L+ Sbjct: 472 GIHIELLFFEFLKDIDYFSIFKGDGNERVITAEENIKELFRGFYDYKSMEANATLI---T 528 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL L D +D V LMT+H+AKGLEF VF+ GME+G+FP SL+E ++ Sbjct: 529 FLEENTLYRDLNTNDEKEDYVTLMTIHNAKGLEFDVVFMTGMEQGVFPHYFSLEEEKGID 588 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 EERRL YVG+TRA +KL LTY++ RR+ + PS F+ E+P++ + Sbjct: 589 EERRLCYVGITRARRKLYLTYSKKRRVSTGIMEQIPSSFLLEIPKKLM 636 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 239/666 (35%), Positives = 372/666 (55%), Gaps = 37/666 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +QR A R +L+LAGAG+GKTRV+ RIA ++ +P SI+AVTFTNKA Sbjct: 4 LSTLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMIE-RGVAPGSILAVTFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGM--------WVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 A EM+ R+ +L+ + TFH L R+LR H ++F I D + Sbjct: 63 AREMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKLGYKKNFVIYDQTE 122 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 QL +K+++ ++ ++ P + ++ K+ G + ++ + + Y+ Sbjct: 123 QLGAIKKILSQVSAKGEKTDPAAILAMLSKYKNGGSQAAAFAD--ESIKAMAEHIRTRYE 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 A VDF +L+L L+ P L+ R RF I+VDE+QDTN Q++ + L Sbjct: 181 SALRACNAVDFDDLILLTLRLFEEHPDALEACRNRFRYIMVDEYQDTNASQFSLVHYLTK 240 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGDDDQSIYGWRGA++ N+ FP + ++LEQNYRST+ IL+AANA+I+ Sbjct: 241 EHRNLCVVGDDDQSIYGWRGAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVIK 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL--AECAILYRS 356 NN R GK+LW+D G I+L+ ++ EA+ +V +I+ ++ + ++ AIL+R+ Sbjct: 301 NNLRRRGKQLWSDKGQGTKITLHTFESDEAEAKAIVEQIE-FKRLASRIPWSQQAILFRT 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QSR LE AL Q + Y + GG +F+R+EIKD L+YL+L N NDD + R+ N P R Sbjct: 360 NIQSRALETALRQGQVRYHLIGGQSYFDRREIKDFLAYLKLFINPNDDISLLRIANVPAR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID---ALAQETA 473 G+ D T++ + S +R+ ++++A + + + R +++ F++ ++ A Sbjct: 420 GLSDVTMERLLAASHERKCSVYEAMKNPMVTTSFLTRTRESIEEFVKFVEETRAPLSSGQ 479 Query: 474 DMPLHVQTDRVIKDSG-LRTMYEQEK-GEKGQTRIENLEELV--------------TATR 517 M L V ++ + ++G L + EK E R+ NL++L T Sbjct: 480 SMSLKVWAEKFLTETGYLEELRRSEKTAEAADNRVRNLKDLTGILDEDNHTIVAGPDGTH 539 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGME 576 Q + D LQ FL L++ + Q +AV L+T+HS KGLEFP V+IVG+E Sbjct: 540 QPVLTNDPADR--LQTFLEELTLDSERKEEKEAQGEAVTLITMHSCKGLEFPHVYIVGLE 597 Query: 577 EGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 +G+ P S EG L+EERRL YV +TRAMQ LT++Y R+ YG+ + PS F+ EL Sbjct: 598 DGLLPHSRSKVEGT-LDEERRLFYVAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKEL 656 Query: 637 PEECVE 642 PEE VE Sbjct: 657 PEELVE 662 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 252/730 (34%), Positives = 392/730 (53%), Gaps = 48/730 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + +SLN+++ EA+ L ++AGAGSGKTRVL +IA+L++V SP I+AVTFTNK Sbjct: 14 IFESLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFTNK 73 Query: 66 AAAEMRHRIGQLMGT--SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 AA+EM R+ Q T ++G + TFH L R+LR NL DFQI+D D+ ++L Sbjct: 74 AASEMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKNDFQIIDDNDKKKIL 133 Query: 124 KRLIKAMNL------------------DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP 165 K + K +L ++ + + +INS + + YG+ Sbjct: 134 KDIYKEHDLVPTDSNFKNLTRFFSWLKNKLYASDEEIIDFINSDPES-------EFYGDG 186 Query: 166 VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDT 225 +T K+Y Y E +DF +LL++ +EL+ P I++ + +++ ILVDEFQDT Sbjct: 187 --ETVVKIYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKKWALKYSYILVDEFQDT 244 Query: 226 NNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 + IQY I+ L+ ++ IVGD DQ+IY WRGA V I F DF +TI L +NYRS Sbjct: 245 SAIQYEIIKYLSSQKAQLTIVGDPDQTIYRWRGADVNLILSFEKDFENTKTIILNKNYRS 304 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T IL+AAN LI+ N R K L TD +DG+ I AF+ E R+VV +I + Sbjct: 305 TKKILAAANNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPEAEVRWVVQKINDLKKQKI 364 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 L AI YRSN+ SR EE L+ + Y+I+GG +F++R+EIKDAL++LR+I + N D Sbjct: 365 QLKNIAIFYRSNSYSRNFEEQLMNEKINYKIFGGEKFYQRKEIKDALAFLRVIYDGN-DL 423 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC----RELLQEKALAGRAASALQRF 461 +R++N P R IG+ +L+ + + ++ L+L++ +EL K + + L Sbjct: 424 QLKRIINVPPRKIGEASLNKIISFANEKNLSLYKTLVNHYKELPVPKEVIINIIALLNCV 483 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + AL Q +HV +K+ G ++ G KG T EN+ L+ + + Sbjct: 484 NKYKAALRQGN---KIHVVLKSFLKEIGFLKYVNEDVGLKG-TGEENIRALLEGIKSWEI 539 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581 ++ L+ + + +L + ++ V LMT+H+AKGLEF VF+VGM E +FP Sbjct: 540 TNPNK---GLKEYFEYISLISASDSSNESMSYVSLMTVHAAKGLEFDNVFLVGMCENIFP 596 Query: 582 SQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 + + +EEERRLAYV +TRA +KL ++ + LY + +PSRF+ E+ + Sbjct: 597 NYRAYKVAEAMEEERRLAYVAITRAKEKLFVSDSRGLLLYS-QTEKKPSRFLKEMGIDIN 655 Query: 642 EEVRLRATVSRPVSHQRMGTPMV-ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQV 700 + + L+ S V + + + + G + H FGEG ++ + G + V Sbjct: 656 KHI-LQKDNSIFVDGELEDEEQIRKRNKKIIAGDVISHTFFGEGEVLEVNGDT----ITV 710 Query: 701 AFQGQGIKWL 710 F GIK L Sbjct: 711 HFATTGIKSL 720 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 247/739 (33%), Positives = 390/739 (52%), Gaps = 63/739 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 DSLN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ N SP I+A+TF+NKA Sbjct: 6 FDSLNEQQKSAVIFTDGALRIIAGAGSGKTRVLTYKIAYLIENRNVSPGDILALTFSNKA 65 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R + + V TFH L R+LR+ + + P DFQILD DQ ++LK + Sbjct: 66 ANEMRDRAYGALEKTNEYPTVSTFHSLCARILRSEIHNFDYPNDFQILDESDQKQVLKIV 125 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 + + + Q+ + +I +QK+ + P + + + + +Y++YQE + A Sbjct: 126 YTELGISQAQYTFGSIISFIQNQKNNLVAPEDLLADEDSAKDPRTLIYKSYQERLNNAHS 185 Query: 187 VDFAELLLRAHELWLNKP--HILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL+ + L+ + I + +RF +L+DEFQDT+ +QY +++LAG +G + Sbjct: 186 LDFDDLLVFVYRLFYDPKFEEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAG-SGNIT 244 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WR A + I F DFP A TI+LEQNYRST IL+AAN LI N RL Sbjct: 245 VVGDPDQTIYSWRNADINIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRL 304 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 KKL+TD +GE I YC F+E EAR + ++I + L AIL+R ++ SR +E Sbjct: 305 DKKLFTDNEEGEDIDFYCGFSEEAEARKIASKISELKRKRVQLKNIAILFRISSYSRAIE 364 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 EAL+ + Y+++G +F++R+E+KDAL+YLR+I + + + RV+N P R IG T+D Sbjct: 365 EALINENTIYKLFGSTKFYQREEVKDALAYLRVIHD-GSEISLLRVINKPARRIGTSTID 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM--------- 475 + + S++ L L++ E L ME + LA ++ Sbjct: 424 KLLKFSKENNLDLFKCLDTKFNE------IQKNLHIQMETLKNLASLINEIRWARRIIQG 477 Query: 476 -PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 +++ + ++ + E+ + R+EN L+ A + E + + Sbjct: 478 NQIYLTLKEFMINNIKYFEEYKSSEEEYENRMENFLNLIEAIHVW---ETKHPHGTIDEY 534 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--- 591 L L D V LMT+H+AKGLEF VF+VG+ E +FP + ++ + Sbjct: 535 LQEITLITDRDVEDDAASYVSLMTIHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKFDF 594 Query: 592 --------------------LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSR 631 LEEERRLAYV +TRA KL L+YA RR K PSR Sbjct: 595 TYLPFEKEEELQKQPENIEGLEEERRLAYVAMTRARTKLFLSYAVNRRGLNK-----PSR 649 Query: 632 FIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 F+ E + ++ ++ S+ + ++ + +G + H+ +G G I+N+ G Sbjct: 650 FLKEAGIKKTSSIQTASSFSQAMD--------IDENVNLIVGDEISHSTYGHGKILNIIG 701 Query: 692 SGEHSRLQVAFQGQGIKWL 710 ++V F + I+ L Sbjct: 702 KI----IEVQFDDKKIRKL 716 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 242/654 (37%), Positives = 373/654 (57%), Gaps = 18/654 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ +L LN +Q A +LVLAGAG+GKTRV+ RIA++++ P I+ + Sbjct: 1 MEKDEILKQLNPEQASAAGTVNGPVLVLAGAGTGKTRVITFRIAYMLAC-GIPPQMILGM 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+ QL+ + +GTFH ++LR F I D DQ Sbjct: 60 TFTNKAAREMRERLAQLVQPQIARKVTLGTFHSFCIKILRRDIAKLGYLPSFTIADESDQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQ 178 +LK+ + + + +P + I K++ P + + + E T ++Y+ YQ Sbjct: 120 QGVLKQAAGQLGCNYEGFPLGEVQSMIGRWKNKLFFPEDARRHADTTFEATAAQLYEEYQ 179 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF ++LL + L+ P +L+ YRE + +L+DE+QDTN Q+ ++LL G Sbjct: 180 TLLEMQNSLDFDDMLLLVYRLFTEHPDVLERYRETYQYLLIDEYQDTNAAQFTIVKLLTG 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D + +VGDDDQSIY WRGA + NI F + FPGA+ ++LEQNYRST++IL+AAN +I Sbjct: 240 DRCNLCVVGDDDQSIYSWRGADISNILGFPDHFPGAKVVKLEQNYRSTTSILNAANVVIG 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL--AECAILYRS 356 +N R K+LW++ DGEP+ + N EA F+ + I +++ L + AILYRS Sbjct: 300 SNANRHEKQLWSNLGDGEPVKIVTTENGESEAEFIGSMITQMKNDKPELRYQDFAILYRS 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N SR LE+ L + +PYR+ GG FF+R+EIKDA++YL+L+ N DD + R++ TP R Sbjct: 360 NHLSRQLEQTLRRQQIPYRLVGGQEFFKRREIKDAVAYLKLLVNPCDDQSLLRILGTPPR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM- 475 G+ + +D ++ R + +++ E +K L +AA+A + F E+ + A+ Sbjct: 420 GLAQKAVDSLKTGRRAKHKPMFELLAEEEFQKELTPKAAAAAREFAEVYAKYKERFAEPG 479 Query: 476 PLHVQTDRVIKD----SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 L + +K+ GL+ +Y+ K R EN++E +TA Q Y E + L Sbjct: 480 ALAWKITEFLKEIGYLDGLQRIYKDLK--DAMKRRENVDEFITAITQ--YEERQAEPPTL 535 Query: 532 QAFLSHAAL--EAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE 588 +A+L + AL E+ + + +T DAV LMT+H++KGLEFP VF+V ME +FP + +L+E Sbjct: 536 EAYLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEFPVVFVVAMERNIFPHERALEE 595 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G +EEE RL YV +TRA + L L A+ R G PS F+ L +E E Sbjct: 596 GS-VEEELRLFYVAITRARKYLYLLRAKERMQRGITRATLPSPFLHLLTDEVAE 648 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 246/655 (37%), Positives = 365/655 (55%), Gaps = 36/655 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q EAV LV+AGAGSGKTRVL +++A L+ E P+ +MA+TFTNKAA E Sbjct: 8 LNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLE-EGYDPHKLMALTFTNKAARE 66 Query: 70 MRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M R+ ++G+ M +GTFH + R LR + +F I D+ D L+KR++K Sbjct: 67 MLSRVESMVGSRDTFRMKLGTFHSVFSRYLRIYAPLLGFTPNFSIYDTSDSKSLVKRIVK 126 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VYQAYQEAC 181 M LD K + P+ + I+ K+ + P + G E +++ VY AY C Sbjct: 127 DMALDPKFYTPKLVLGRISHCKNNLITPEGYAAGGEYAEYDYRRGVPMLHSVYAAYVAQC 186 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +A +DF +LL + L + P + +L+DE+QDTN QY R L Sbjct: 187 RQANAMDFDDLLYYFNILLRDHPEVQAECAASVDYLLIDEYQDTNPSQYLIARRLVEAKQ 246 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 ++ VGDD QSIY +RGA ++NI F + FP A +LE+NYRS+ I++ AN+LIE+N Sbjct: 247 RIFAVGDDAQSIYSFRGASMQNILTFTHTFPSARLFKLEENYRSSQRIVALANSLIEHNV 306 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI--KTWQDNGGALAECAILYRSNAQ 359 R+ K ++++ A GE I LY + EA+ VV I + + + + AILYR+NAQ Sbjct: 307 HRIKKDVFSNRAKGEKIDLYEMESGYREAQHVVESIYKRYCKHSETSYGSFAILYRTNAQ 366 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+ E+ L QA +PYRIYGG+ F+ R EIK+ L+YL+LIAN +++ AFER P +GIG Sbjct: 367 SRLFEDQLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIANPHNNEAFERAAKYPRKGIG 426 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELL-QEKALAGRAASALQRFMELIDALAQETADMPLH 478 D+TL ++R + D + +L+ A L+ + L+ A + L ++ELI + L Sbjct: 427 DKTLSLIRTEAADNKTSLFAAAESLIARPDTLSSTARTKLTAYLELIRDITYNPEAKTLV 486 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE------------ 526 ++ S + + +G T++EN+ E V+ ++F EDE Sbjct: 487 EWVQSILLRSQILDTLRADTSIEGHTQLENVNEFVSGVQEF----EDETSADGLFFERGE 542 Query: 527 -----DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581 DL+ L FL L + DAV LMT+H+AKGLEF V+IVG+EEG+FP Sbjct: 543 TTSLHDLLVL--FLQGVTLITDNLETGENADAVHLMTIHAAKGLEFDHVYIVGLEEGLFP 600 Query: 582 SQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 S +S E +EEERRL YV +TRA + ++++A R + G Y PSRF+ +L Sbjct: 601 SMLSA-EEENIEEERRLLYVAITRAKEYCSISFARYRAINGMTEYMIPSRFLRDL 654 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/522 (39%), Positives = 318/522 (60%), Gaps = 3/522 (0%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L++LN +Q EAV LLVLAGAGSGKTRVL +RIA ++ +P+ I+A+TFTNKA Sbjct: 5 LETLNPEQHEAVMTTEGPLLVLAGAGSGKTRVLTYRIAHMIEDLGVAPWEILAITFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 AAEMR R+G L+G + GMWV TFH + R+LRA+ ++F I +D RL+K + Sbjct: 65 AAEMRERLGALVGPAARGMWVSTFHSMCVRILRANAEVIGFTKNFTIYADDDSKRLIKDI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAG 185 + +++D K++P I+S K+E + P Q +P+ +VY Q+ +A Sbjct: 125 MAQLDIDPKRFPVNALRNRISSAKNELILPDAFDQRASDPIALVAARVYHELQKRLHQAN 184 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL+ L+ + P++L+ Y+ERF +LVDE+QDTN+ QYA LLA +M+ Sbjct: 185 AFDFDDLLMYTWLLFKHHPNVLEAYQERFRYLLVDEYQDTNHAQYAITTLLAARHKNIMV 244 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA + NI F D+P T++LE+NYRST+ IL AANA+I +N R Sbjct: 245 VGDDDQSIYSWRGADIRNILEFEQDYPQTRTVKLEKNYRSTATILDAANAVIAHNVNRKS 304 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+L G G+ I +Y A +E DE R++ I+ G + + A+ YR+NAQSR+LE+ Sbjct: 305 KRLVPTGDTGDKIHVYMASDERDEGRWIAGEIERRHTQGTSYNQIALFYRTNAQSRMLED 364 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG T+++ Sbjct: 365 MLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDMAAKRVINVPRRGIGKTTIEL 424 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + T +A + + ++++ +AL +F L+ A T ++ V+ ++ Sbjct: 425 IDACAARNNCTFLEAAQLTIADESVRLSTRTALGQFTSLLSEAATWTGELRRIVEM--IL 482 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 + SG+ E ++ R+EN++E + +F+ + ++ Sbjct: 483 ERSGMVRALENSGTDEDLGRVENIKEFLGVVDEFTATHDADE 524 Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 3/95 (3%) Query: 548 DTWQD---AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 DT D AV LMT+H+AKGLEF VF+ GMEE +FP S+++ +EEERRLAYV +T Sbjct: 631 DTMSDDGTAVTLMTVHAAKGLEFDCVFVAGMEETIFPHMNSINDATGVEEERRLAYVAIT 690 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 RA ++L +T A R+L+G+ + SRF+ E+P E Sbjct: 691 RARKQLYITCASNRKLFGQTQANPTSRFLAEIPAE 725 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 255/724 (35%), Positives = 397/724 (54%), Gaps = 36/724 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q+EAV ++ V+AGAGSGKTRVL RI L++ P I A+TFTNKA Sbjct: 4 IQGLNKEQKEAVLTKAKHVRVIAGAGSGKTRVLTTRIVHLIADLGYYPSKICAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+ + M + T H L R++R + NL ++F ILD+ DQ +++ Sbjct: 64 ANEMKERM-EAMLPDAIRVHTSTIHSLCVRIIREEYEALNLVRNFTILDTSDQQAVMREA 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRA 184 K + D K R+A+ YI++ K G+ + N EQ +Y+ Y Sbjct: 123 YKQFDYDRKDISFREALTYISNNKFAGVDVAQAERMAGSNYHEQKKVNLYRFYVNRLHEL 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LLL + L+ + +R RF +LVDEFQD +++QY + L GD ++ Sbjct: 183 FALDFDDLLLEVNRLFKENLEVRDKWRRRFDVVLVDEFQDVDHVQYGIVDALVGDENQLY 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WRGA V+ I F +P +ETI L QNYRST +IL +AN LI+NN R Sbjct: 243 VVGDPDQTIYTWRGANVDFIIDFDKKYPESETITLNQNYRSTQHILDSANTLIKNNKDRP 302 Query: 305 GKKLWTDGADGEPISLYCAFNELD-EARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K L+ + P+ Y ++ D EA +V NR+ D G + + A+LYRSN SR L Sbjct: 303 DKALYANKESEFPVQ-YATLDDGDAEAYWVANRMLELHDEGHSYLDMAVLYRSNYLSRAL 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+ L+ +PY IYGG+RF+++ EIKD +SYLR+I + DD A R + P RGIG++TL Sbjct: 362 EKVLMARRIPYVIYGGLRFYDQAEIKDMMSYLRMITH-GDDLALRRSIAMPRRGIGEKTL 420 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 D + +R+R++T++++ + + +A ++ ++ +I+ + + + Sbjct: 421 DTIMLQAREREMTMYESMLYDVHHQ----QATPKIRNYVMMIEDFREMAQEASIETIMQY 476 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 V+K SGLR +E+ + + R+E+L+EL+ F N E+ L ++ +L G Sbjct: 477 VLKRSGLREHFEKIQELE---RVESLKELIGDALTFQENYENP---SLDEYIQMVSL-YG 529 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRLAYVG 602 + + V+LMT+H+AKGLEF VFI+G+ + +FP++ S+ EG G ++EERRL YV Sbjct: 530 DKSEVVEGEYVRLMTVHAAKGLEFENVFIMGLADNIFPNKNSIQEGSGGIQEERRLMYVA 589 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP-EECVEEVRLRATVSRPVSHQRMGT 661 +TRA ++L L+ Y R SRFI E+ +E E+ T+SR S + Sbjct: 590 ITRAKERLFLSNNIGYNFVAGG-YARASRFIKEMHLDEKTSEMEATPTISR--SEVQDAI 646 Query: 662 PMVENDSG---------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLV 711 E SG +K G +V H FGEG ++ ++ +++AF G K + Sbjct: 647 SSFEKASGLSKLKKKIKFKSGDQVVHDDFGEGIVIRVDDDT----IKIAFNFPHGTKVIS 702 Query: 712 AAYA 715 YA Sbjct: 703 RKYA 706 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust. Identities = 247/643 (38%), Positives = 349/643 (54%), Gaps = 31/643 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q AV LLVLAGAGSGKTRV+V +IA L+++ I A+TFTNK+ Sbjct: 1 MHGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKS 60 Query: 67 AAEMRHRIGQ-LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ + + G G+ + TFH L + L+ H A L + F I DS+D +K Sbjct: 61 AKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRA 184 L+ D + A I+ K+ G+ P + + E+ +Y+ YQ Sbjct: 121 LMHGAKPDAIE----DAKNLISRAKNAGMSPEQAMAAARSNREKEAASLYERYQARLTTF 176 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ ++ I+ +RER +LVDE QDTN+ QY +++LAG G Sbjct: 177 NAVDFDDLIRLPVQILEANEEIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFT 236 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY WRGA EN+Q+ D+P E I+LEQNYR ++ +L AANALI +N Sbjct: 237 CVGDDDQSIYAWRGANPENLQQMGRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEH 296 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIK--------TWQDNGGALAECAILYRS 356 K LW+D ADGE I ++ + EA V I W D IL+R Sbjct: 297 LKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSD-------FCILFRG 349 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QSR LE+AL +PY + GG F ERQE+KD LS+LRLI N DDAAF R V +P R Sbjct: 350 NFQSRPLEKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSPKR 409 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 +G +L + + + + + + +A + + L RAA+ L F +++ + + +A +P Sbjct: 410 EVGATSLARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSATLP 469 Query: 477 LHVQTDRVIKDSG-LRTMYEQEKGEKG-QTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + SG L + Q K E G Q R NL+EL DL A Sbjct: 470 AGELVRTLADKSGLLNDLRNQSKDEAGFQRRKRNLDELAEWFEGGPRGASASDLAAQLAL 529 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 LS + G Q V++MT+H++KGLEF VFIVG E+G+ P ++SL+EG L+E Sbjct: 530 LSRNDKDDGGNQ-------VRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEEGN-LQE 581 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 ERRL YVG+TRA Q+L ++Y++ R +G+ V +PSRF E+P Sbjct: 582 ERRLLYVGITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEIP 624 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 230/648 (35%), Positives = 355/648 (54%), Gaps = 33/648 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 N+ Q++A++ L+LAGAGSGKTRV++++I L+ + + P I A+TFTNKAA E Sbjct: 3 FNEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACE 62 Query: 70 MRHRIGQLMGTSQGGMW-VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ RI ++ + + + TFH L ++++ N+ +F I D +DQ+ +L+ ++ Sbjct: 63 MKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVS 122 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDRAGLV 187 E + RQ I++ K++ L P+ + N +E + + Y+ Y + ++ Sbjct: 123 K----EDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNIL 178 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ L + + + ++ +LVDE+QDTN IQY I+LL+ +VG Sbjct: 179 DFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVG 238 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA + N + +D+P TI ++ NYRS+ IL ANALI NN KK Sbjct: 239 DDDQSIYSWRGANIHNFESLKHDYPNLRTIIMQHNYRSSGRILKVANALISNNLHFFNKK 298 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVLEEA 366 L+++ G + + A NE DEAR ++ + + N A + AILYRSN Q ++ E+ Sbjct: 299 LFSNLDYGSIVEIISAKNEEDEARVILQTLMLHKSNYNAQYKDYAILYRSNYQVKIFEKF 358 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L++ +PY+I + FF R EIKD ++YLRLI N +D+AAF RVVN P RGIG TL + Sbjct: 359 LIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQKL 418 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 ++ S+ R + + A ++ E L +LQ F+ LI ++ + P+ V Sbjct: 419 KEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPIEV------- 471 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQ-------FSYNEEDEDLMPLQAF----- 534 L + K EK R +L A+ + + NE +M + F Sbjct: 472 ---LEKLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYL 528 Query: 535 ---LSHAALEAGEGQADTW-QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 +S L+ + D VQLMTLH++KGLEF VFIVG+EEG+ P + Sbjct: 529 IDIISEFILQNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTTMEN 588 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 ++EERRLAYVG+TRA +KL L+YA R YG + +PSRF+ ELP+ Sbjct: 589 NIDEERRLAYVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLRELPQ 636 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 247/647 (38%), Positives = 367/647 (56%), Gaps = 33/647 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD LN KQ EAV N L+LAGAGSGKTRVL +IA+L+S + SP I+AVTFTNK Sbjct: 9 VLDGLNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTNK 68 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH-----MDANLPQDFQILDSEDQL 120 AA EMR R+ +L+G S G+ + TFH LR + M P ++D DQ Sbjct: 69 AAGEMRQRVERLLGGSLHGIRICTFHSYGLNFLRRNEEIMRRMGYATP--LVVIDRSDQK 126 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RLLK L+K N+DE++ P M ++ K EG + + Q++++AY+ Sbjct: 127 RLLKLLLKENNVDERRVDPSWLMEAFSAAKGEGNGSAYFRGEA-------QRLFEAYEAK 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 G +DF +L+ ++ L+ + +LVDE+QD N QY ++ L+ Sbjct: 180 MRSQGALDFDDLIHLPLKILSTHREALERELDSIEWVLVDEYQDVNRSQYMLLKRLSSRG 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + ++VGD DQ+IYGWRGA V I F DF GA+ LEQNYRST +IL AN +I N Sbjct: 240 QRTVVVGDPDQAIYGWRGADVSMILNFDKDFQGAKVTVLEQNYRSTGHILEGANCVIARN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + R K LWT + GE I + A N+ +++R +V+ I Q G AL + AILYR NA S Sbjct: 300 SDRPKKNLWTAASRGEKIRILKARNDEEDSRCLVDWILELQGEGYALKDMAILYRVNALS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ E+ L++A +PYR+ G+ F++R+EIKD L+ +RL D +FER+VN P RGIG Sbjct: 360 RLYEQRLIEAGIPYRVIRGLGFYDRKEIKDVLALMRLAIQPRDLVSFERMVNVPQRGIGA 419 Query: 421 RTLDVV----RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 ++ + + Q W++ E + L GRA ++ + + ++ Sbjct: 420 KSTEALWAWMGQLEAQDPGEFWRSVLE--GDAPLKGRAREGIRALARGMLGILSLRGNIR 477 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 L V+ ++++ G E+E + R++N+EEL++ + S + D++ A S Sbjct: 478 LAVRY--ILEEYGYGEHLEREDQSTFEERLQNVEELMSVLPEGSID----DVLSEVALFS 531 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 A + +G+ D V L+TLH+AKGLEFP VF+VG+EEG+FP+ ++ LEEER Sbjct: 532 DADVASGD-------DRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCREDRSLLEEER 584 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 RL YVG+TRA ++L L+ A R L+G + + SRF+ E+P CV E Sbjct: 585 RLFYVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEIPSSCVVE 631 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 245/719 (34%), Positives = 396/719 (55%), Gaps = 46/719 (6%) Query: 6 LLDSLNDKQREAVAAPRS-NLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + DS N+KQ EA+ AP L+V+AGAGSGKT VL +R +L++ N I+ TFTN Sbjct: 5 IYDSFNEKQYEAITAPDDVPLMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTN 64 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQ---DFQILDSEDQLR 121 KAA EM+ RI +++ ++ ++GTFH + R+LR + N+ + +F I+D +DQ Sbjct: 65 KAANEMKDRITKVI-PNRSFKYIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNS 123 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI---------QSYGNPVEQ-TWQ 171 +LK + K N D++ + + +I+ K + + + +Y V++ + Sbjct: 124 ILKEIYKLNNFDKQILNYKVCLSWISKLKSDNIYDANDVYEWLSFLDNTYDGKVKKDIFA 183 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 VY+ Y L+DF +L+ A + L I ++ RF ILVDEFQDTN QY Sbjct: 184 AVYEGYINFLRDGNLLDFDDLIKYARRV-LEIEEIRTKWQNRFDYILVDEFQDTNYDQYQ 242 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I+LL+ + + VGD DQ IY WRGAQ + F DF + TI LE+NYRST NIL+ Sbjct: 243 IIKLLSKNFKNIFAVGDPDQMIYSWRGAQENIFEVFKKDFSDSLTIVLEKNYRSTKNILN 302 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAEC 350 AN+LI+ N R+ K L+TD + I + A ++ E++FV RIK D+ + Sbjct: 303 IANSLIQKNKNRIKKNLYTDSSTESEIIYFEADDQNLESKFVCTRIKDLVDSKKYNYKDI 362 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+N SR +EE L +PYRI+GG +F++R+E+KD ++Y++LI N +D+ + R+ Sbjct: 363 AILYRANYLSRNIEEFLSNYRIPYRIFGGFKFYQRKEVKDIIAYMKLIVN-SDEVSLTRI 421 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 NTP R I + T ++ + ++ + A + + + + + R +A++ F + + + + Sbjct: 422 YNTPRRQISEATYFKIKNYAVLNNISTFAAFKFVDEIEGIQTRTKNAVKAFYDSMIEIRE 481 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT-RIENLEELVTATRQFSYNEEDEDL- 528 + + +I D +T Y + E G+ R EN+ EL A++ F N ++ Sbjct: 482 KK-----YGSISEMIDDIVEKTKYYEMLKEDGEEHRTENIIELKNASKNFEQNNPGSNIN 536 Query: 529 MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE 588 LQ + + E Q + QD+V LMT+H++KGLEF VFI+ E +FPS SL+E Sbjct: 537 FYLQELALLTSNDEEENQKNK-QDSVSLMTVHASKGLEFKIVFIIQFNENIFPSIRSLEE 595 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVE----- 642 G L+EERR+AYV +TRA + L ++ +G +E+ PSRFI E+ + +E Sbjct: 596 GN-LDEERRIAYVAITRAKENLYISCCNGTSFFGNREMEREPSRFISEIGDALIEKRLIT 654 Query: 643 --EVRLRATVS-------RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGS 692 + + +A+ V H + E++ Y +G+ + H KFGEG ++N+ G+ Sbjct: 655 KNQTKFKASTQFNNSNNGSKVDHSKFH----ESEKTYYVGELIIHDKFGEGIVLNVSGN 709 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 249/667 (37%), Positives = 365/667 (54%), Gaps = 28/667 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + L LN +Q +AV LL+LAGAG+GKTRV+ R+A+L+S + P I+AVTFTN Sbjct: 4 FSLFDLNPEQEQAVRTTEGPLLILAGAGTGKTRVITMRVAFLIS-QGVDPSHILAVTFTN 62 Query: 65 KAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EMR R+ +++ SQ + + TFH L R+LR ++F I D DQ+ L+ Sbjct: 63 KAADEMRERLAKMIEPSQAKKVTMSTFHALCVRILRQDIEKLGWKKNFSIYDEGDQMGLI 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEACD 182 K++I +++ P A I+ K+ G R S G+ E+T V+ YQ Sbjct: 123 KKIITRTAAKDEKLDPNVAKNLISKAKNNGWRE---VSPGD--EKTLAGAVFARYQAELK 177 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA----- 237 VDF +LLL A ++ + + RF ++VDEFQDTN +Q + +LA Sbjct: 178 TLNAVDFDDLLLLAVKVLSEHADVRDRWHRRFRYLMVDEFQDTNRLQLELVSMLAKPAEG 237 Query: 238 -GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 G V +VGDDDQSIYGWRGA+V NI F FP ++LEQNYRST+ IL+ AN L Sbjct: 238 TGGRPNVAVVGDDDQSIYGWRGAEVSNILEFEAHFPDPVVVKLEQNYRSTNAILNTANFL 297 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL-AECAILYR 355 I+NN R KKLW+ DG+ + + ++ EA F+ N I A E AIL+R Sbjct: 298 IKNNPRRRPKKLWSSAGDGDKVRIVGMSDDRQEAEFIANEIAQRSVTESAPHEEFAILFR 357 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 NAQSR+LE L Q ++PYRI GG FF+R+E+KD L+Y + N +DD + R++NTP Sbjct: 358 MNAQSRLLETNLRQLNIPYRIIGGKSFFDRREVKDLLAYANCLVNTDDDVSLLRIINTPA 417 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 RGI T++ S ++ +++ L R +L RF+E++D + + Sbjct: 418 RGISSNTVEKATDFSAKQKCSVFDVLTNEAFRGTLTKRTVESLDRFVEMLDRF-ETKLNT 476 Query: 476 PL--HVQTDR-VIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 PL H R ++K++G ++ + ++ +R NL +L+ + + + Sbjct: 477 PLSDHAAVLREMMKETGYLDELKRTCKTPQEALSRETNLMDLLKSFEDYQGRSSE----G 532 Query: 531 LQAFLSHAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE 588 L+ FL +L E E D V L+TLH+AKGLE+P V+++G+EEG+ P S E Sbjct: 533 LRGFLDEMSLRQEREEDDDDARGTGVTLITLHAAKGLEYPHVYLIGLEEGLLPHDRSKLE 592 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 G ++EERRL YVG+TRA + L L++ R YG + PS FI ELP E + Sbjct: 593 GT-VDEERRLLYVGITRARRTLALSWCRHRIRYGSPMPCTPSSFIKELPPEWIIHRDATQ 651 Query: 649 TVSRPVS 655 + PVS Sbjct: 652 ILQAPVS 658 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 245/695 (35%), Positives = 374/695 (53%), Gaps = 24/695 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLDSLN Q+ AV S L ++AGAGSGKTRVLVH+IA+L+ N PY I+AVTFTNK Sbjct: 8 LLDSLNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQILAVTFTNK 67 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI L+ + + TFH L +LR P++F ILD DQ +LK Sbjct: 68 AANEMKERIKTLVDNHESEPLISTFHALCVYILRRDIDVLKYPKNFTILDVADQFDILKN 127 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEACDRA 184 + + ++++ + YI+ K +++ N + + K+Y Y E + Sbjct: 128 IYEKFDINKIDITLTSMINYISFHKINKTPIEVLETEDNSEDDRIKLKIYLEYNEILKKL 187 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 L+DF +LLL+ EL+ P I + RF ILVDEFQDT+ IQY I+ LA + + Sbjct: 188 ALLDFNDLLLKTQELFEKFPEIKLKWSRRFKYILVDEFQDTSPIQYEIIKTLAQNHN-LT 246 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 IVGD DQ+IY WRGA V I F DF A+TI L NYRST IL AN+LI N RL Sbjct: 247 IVGDPDQTIYSWRGANVNLILDFHKDFENAKTINLNLNYRSTEKILKHANSLIHFNKKRL 306 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQSRV 362 K L G+ + + A + EAR+VV++IK W L+E +I+YR+N S+ Sbjct: 307 EKDLVAYTKQGQEVIFHHALSPELEARWVVDKIK-WLISIEKAKLSEISIIYRANFYSKN 365 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 E+ALL+ S+ ++++GG +F+ER EIK+ALSY++L+ + + D AF+R++N P R IG+ Sbjct: 366 FEDALLRESIHHQVHGGEKFYERSEIKNALSYIKLLVS-DSDLAFQRILNIPQRSIGNIY 424 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + + L+++QA L++ ++ L + I+ + + + V D Sbjct: 425 RNKILDYCDESNLSIFQAINNHLEDLPVSSNIREKLFDLIFKINKYQKIINENNVQVSVD 484 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 D E K +++N++EL+ + N + Q + +L Sbjct: 485 EFFADIKYYDYLANEDTFKN-GKVDNVKELLIIISNWFRNNPKK---TFQDYFEEISLVP 540 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLEEERRLA 599 Q D ++ V LM +H+ KGLEF VF+VG+ E + PS+ +L+ + LEEERRLA Sbjct: 541 NASQEDD-KNTVSLMNIHNCKGLEFSYVFLVGLSEEILPSKKALENDFDDSNLEEERRLA 599 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL-------PEECVEEVRLRATVSR 652 YV +TRA + L LT ++ + + SRFIGE+ ++ +E+ +++ Sbjct: 600 YVAITRAKKMLFLTDSDGYLFGNFKTQKKTSRFIGEMGIVLENENQKTMEQYMNSVLLNK 659 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 V M ND + +G ++ H FGEG ++ Sbjct: 660 QVD--LMKDYQTNNDDIF-VGDKIVHKVFGEGIVL 691 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 211/467 (45%), Positives = 292/467 (62%), Gaps = 6/467 (1%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN +QR AV AP +L+LAGAG+GKT+ L RI L++ P I+AVTFTNKA Sbjct: 29 LDDLNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTFTNKA 88 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+G+++G +G W+GTFH ++ ++LR H L +F ILD++DQ+RLLK+L Sbjct: 89 AREMKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRLLKQL 148 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACDRAG 185 I A N+DEK+WP R I+S K+ P + S + ++YQ YQ+ Sbjct: 149 IVAENIDEKRWPARLLAGLIDSWKNRAWTPAKVPSSEASAYNNRGTELYQMYQDRLRALN 208 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LLL ++ P +L Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 209 ATDFGDLLLHVVTIFQTHPDVLAQYQRWFRYILVDEYQDTNVAQYLWLRLLAQAHRNICC 268 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+A+I N GRLG Sbjct: 269 VGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTPHILAAASAVIAANKGRLG 328 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-----LAECAILYRSNAQS 360 K LWT+ GE + L ++ +EAR++ + ++ Q A L + AIL R++ Q Sbjct: 329 KTLWTEREAGEKVRLIGHWDGEEEARWIGDELEALQRGTRAMDPHSLDDMAILVRASHQM 388 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ L +PYR+ GG RF+ER EI+DA++Y RL + DD AFERVVNTP RG+GD Sbjct: 389 RAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRLAVSPADDLAFERVVNTPKRGLGD 448 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDA 467 +++ +R ++L RELL + + G+ A+ L+ F+ DA Sbjct: 449 TAQQNIQRRARAAGVSLLGGARELLAQGGIGGKGANQLRTFVTSCDA 495 Score = 154 bits (389), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 105/281 (37%), Positives = 148/281 (52%), Gaps = 61/281 (21%) Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++++++SG M++ +K + R+ENL+ELV A QF LQ FL H +L Sbjct: 572 AEQILEESGYTAMWQADKTPEAPGRLENLKELVKALEQFEN---------LQGFLEHVSL 622 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRL 598 E +++ + V +MTLH+AKGLEFP VF+ G E+G+FPSQ S+DE G +EEERRL Sbjct: 623 -IMENESEEAAEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKGVEEERRL 681 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 AYVG+TRA T+++A RR+YG+ PSRFI ELPE VE Sbjct: 682 AYVGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPPGLYGGGYGAAG 741 Query: 643 ---------EVRLRATV-----------------SRPVSHQRMG-TPMVEND--SGYKLG 673 + RA +RP++ R +++ D S + L Sbjct: 742 MQAGFGGGSGIEQRAASADAYNSPGWKRMTERAPTRPMAQPREARNSVIDLDAISSFTLD 801 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 RV HAKFG GT+V +EG +L VAF G+K LVA + Sbjct: 802 DRVFHAKFGYGTVVGIEG----DKLDVAFDKAGVKKLVARF 838 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 236/644 (36%), Positives = 353/644 (54%), Gaps = 21/644 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +QR AV LL++AGAGSGKTRV+ RIA+++ I+A+TFTNK Sbjct: 1 MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLEC-GILQSRILALTFTNK 59 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM RI L G V TFH +LR H ++F I D D+ L++ Sbjct: 60 AAHEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIRE 119 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 K ++L + ++ K ++ +++ + W + Y A Sbjct: 120 AAKEVHLLPEVLDTNCVSTLFSAIK---MQRKNLKELQHKERALWHE----YHTALKLFN 172 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF +L++ +++ P IL Y+ R+ ILVDEFQDT+ QY +++LA T + + Sbjct: 173 AVDFDDLIVLPIQIFSEYPDILASYKSRYHYILVDEFQDTSAQQYRLMKMLA--TQNICV 230 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA +NI F DFP A I LEQNYRST IL+AAN +I +N R Sbjct: 231 VGDDDQSIYSWRGAHHDNILSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKE 290 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQSRVLE 364 K LW+ G+PI ++ E DEA F+ N I Q + + +L R+N+ R++E Sbjct: 291 KALWSGNDSGKPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIE 350 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 + LQ ++PYR+ GGM FF+R+EIKD LSYLR+I+N +DD R++NTP RGIG +TL Sbjct: 351 DVFLQENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLH 410 Query: 425 VVRQTSRDRQLTLWQACRELLQEKA---LAGRAASALQRFMELI-DALAQETADMPLHVQ 480 +V + +Q +++ A +++ + L +A++ F++LI A + L + Sbjct: 411 LVSDIANTQQCSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYK 470 Query: 481 TDRVIKDSGLRTMYEQE--KGEK-GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + ++D QE K E + + +E LV + + E+ + L +L+ Sbjct: 471 VRKFVEDIQYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHW---EQSSEHGSLYDYLNR 527 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L A + + AV LMT+H++KGLEFP VFI G+E G P + S++E +EEERR Sbjct: 528 VTLLARDNVQKETEGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSIEEERR 587 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 L YV +TRA +KL LT+ TR+ GK S F+ E+P+ V Sbjct: 588 LFYVAITRAKEKLYLTHCRTRKRGGKREERTASPFLDEIPKHLV 631 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust. Identities = 252/642 (39%), Positives = 348/642 (54%), Gaps = 13/642 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + D LN +QR AV S LLV+AGAGSGKT V+ +IA+L+ + ++ AVTFTNK Sbjct: 1 MFDQLNPQQRAAVLYLDSPLLVIAGAGSGKTGVITEKIAYLIESAHYDAPNVCAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R + G+ + TFH L +L AN + F I D D L LL+ Sbjct: 61 AAREMLARSRARLKKRAHGLTIATFHRLGLMMLERDFAKANRRRGFSIFDQHDSLTLLRE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ--KVYQAYQEACDR 183 L ++ R+ +I++ K+ + P S E Q K+Y AY E Sbjct: 121 LCH----NDDDAFLRRMQQHISAFKNANVLPEETASLMIDDETAAQAAKIYCAYCERLQA 176 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +LLL L + ++E+ + VDE+QDTNN QYA ++L+ G G + Sbjct: 177 YNAVDFDDLLLLPTRLLKTDAAVRGFWQEKIRYLFVDEYQDTNNCQYALMQLIVGAGGAL 236 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIY WRGAQV+N+Q D+P I+LEQNYR IL AAN LI +N Sbjct: 237 TAVGDDDQSIYAWRGAQVKNLQYLQEDYPQLHIIKLEQNYRCHHKILQAANTLIAHNPHL 296 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRV 362 + K+LW+ G+ + ++ A N+ EA + + I + A A+LYRSN Q+R Sbjct: 297 VEKRLWSQLERGDGVCVFAARNDEAEAERIASAIYQQKLRTQAAWQNFAVLYRSNFQARA 356 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E+AL S+PY+I GG F+E EI+D L+YLRLI N DDAAF R+ N P R IG +T Sbjct: 357 IEQALRDVSIPYQISGGTSFYEHSEIRDLLAYLRLINNPEDDAAFLRICNVPKREIGTKT 416 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L V+ + + RQ L+ A EL L+ RAA ++Q+F + I+ +E Sbjct: 417 LTVLGEYAAKRQCCLFYAATELGLATLLSARAAMSVQQFCQWIEEKQKEAETALPSALLQ 476 Query: 483 RVIKDSGLRTMYE-QEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 VI + R E E K + R +EEL+ + EE+E L + H L Sbjct: 477 TVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLVRL---EEEERYQSLAGLMRHVLLL 533 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 D +D VQLMTLH+AKGLEFP V+I G+EE + P + + EERRL YV Sbjct: 534 DILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEEDLLPHHHCGESEEAIAEERRLLYV 593 Query: 602 GVTRAMQKLTLTYAETRRLYGKE-VYHRPSRFIGELPEECVE 642 G+TRA +LTL+YA+ RR +GK SRF+ ELPEE ++ Sbjct: 594 GMTRAKFQLTLSYAKQRR-HGKNWEASTASRFLQELPEEGID 634 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 247/667 (37%), Positives = 365/667 (54%), Gaps = 42/667 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q++AV LL+LAGAGSGKT VLV R L+S I +TFTNKAA E Sbjct: 7 LNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICVLTFTNKAARE 66 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 ++HR+G +G+S GMW GTFH ++LR H A L F I+D D ++K LIK Sbjct: 67 LKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDCNAIVKDLIKD 126 Query: 130 M-NLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVEQTWQKVYQAYQEACDRAGL 186 + N + ++ + + IN ++ G+ P Y VE K + + + G+ Sbjct: 127 IKNSGKDKFDADKILNMINDRR-TGMAPQTEAFDEYHEMVEVLTPK----FTKRLEHLGV 181 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 VDF LL++ L+ P IL+ + FT ++VDEFQDTN +Q I + + +V Sbjct: 182 VDFEGLLIKPITLFKENPEILEKVQGMFTQVMVDEFQDTNRLQMDLIAQIVKSHNNIAVV 241 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA+V+NI F +F E I+LE+NYRS++ IL+ ANA I N R GK Sbjct: 242 GDDDQSIYGWRGAEVKNILNFPQEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHGK 301 Query: 307 KLWTDGAD--GEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 L A+ G+ L+ E DE FVV I +Q G + + A+LYRSN Q ++E Sbjct: 302 ILRPQVAEDTGQLPELFILDREEDECEFVVTEILNFQRQGYSYKDMAVLYRSNTQGGLIE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +L +A++PY I GG F+R+EIKD ++YL+ N + + R++N P+RGIGD +++ Sbjct: 362 SSLRRANVPYHISGGTSIFDRREIKDLMAYLKQALAPN-EVSLRRIINVPSRGIGDTSIE 420 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL----HVQ 480 + + + +++ ACR QE + +A +A+ M I+ L + D + + Sbjct: 421 KLSEFALKKRINFVDACR-FWQEAGVQDKAGAAIDDLMMFIENLPKNILDFQVGSSPGAK 479 Query: 481 TDRVIKDSGLR-----TMYEQEKGEKGQTRIENLEELVTA-TRQFSYNEED----EDLMP 530 ++ +D G R T + EK +E L ++ + + SY+ E+ D M Sbjct: 480 MVQIFQDIGYREYVYGTAADPTSAEKKWMVVEILGRILDSFLGRRSYDVENIKSFVDCML 539 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L+ LS LE + VQLMTLH++KGLEFP V + G+EE + P + + G Sbjct: 540 LRDDLSEEELE----------NKVQLMTLHASKGLEFPVVILAGLEEDLLPHK---NLGS 586 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 ++EERRL YVGVTRA ++L ++ + R+ G PSRF+ ELP+E E L A Sbjct: 587 DIDEERRLFYVGVTRAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGA-- 644 Query: 651 SRPVSHQ 657 RPV Q Sbjct: 645 -RPVVGQ 650 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 238/719 (33%), Positives = 388/719 (53%), Gaps = 43/719 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 ++ LND QREAV + V+AGAGSGKT+ L R +L+ S +I+ TFTNK Sbjct: 5 VISGLNDAQREAVTTTEGYIRVIAGAGSGKTKALTSRYIYLVHELGISTANILCATFTNK 64 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI ++G + G+ +GTFHG RLL+ N P +F ++D+ED +L+ Sbjct: 65 AAREMKKRIRTMIGDNDTGL-IGTFHGFCRRLLKEDIYTINYPDNFIVMDNEDMDLVLRI 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLR--PHHIQSYGNPVEQTW-------QKVYQA 176 + + N+ KQ+ +A I+ +K++ + + I++ N +++ + +++ Sbjct: 124 VYEDANISSKQFTFSKAKDMISKRKNKDFKYISYIIETDNNELKKKFLTSKNVEDRIFYG 183 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y + +DF +L++ + P + + ++++ I+VDEFQD N QY + +L Sbjct: 184 YLYQQKKNYNLDFNDLIIFTLHILETFPKVRKKWQQKLEYIMVDEFQDVNIKQYRLVSIL 243 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD DQ++Y WRGA V I F +F G +TI + QNYRS+SNI+ A+N+L Sbjct: 244 SEYHKNLFVVGDPDQTVYSWRGANVNLILNFDKEFKGTKTIMMNQNYRSSSNIIKASNSL 303 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I N R+ K+L P+ + N EA +++N+I+ G + AILYR+ Sbjct: 304 ISKNKQRIDKELIPIKHGNIPVVYKHSENIYKEANWIINQIEQIIKGGNSYKNIAILYRA 363 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + SR +EEALL+ +PY +Y G+ F++R+EIKD LSYLR++ DD +F R++N P R Sbjct: 364 HYVSRSIEEALLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVV-FEDDLSFIRIINEPKR 422 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G + ++++R+ + D +L+ + + L++K +A A +F++LI+ + +M Sbjct: 423 NFGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLIAKSKAD---KFVDLIERYKKIYKEMR 479 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + ++ +SG M +E GE R+ENL EL + + N ED L+ +L Sbjct: 480 ITDLLMELLNNSGYEAML-RESGE--DERLENLAELKNSISDYE-NSAGED-TTLEDYLQ 534 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L + +D + +MTLH+AKGLEFP VFI EG+FPS + + ++EEER Sbjct: 535 EISLFTNSDLKEN-KDTINMMTLHTAKGLEFPYVFICEFNEGIFPSART-NTKEKMEEER 592 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG-----------ELPEECVEEVR 645 RLAYVG TRA L L+ AE G Y PSRFI EL E +++ Sbjct: 593 RLAYVGYTRAKNALFLSDAEGVNYDGS--YRFPSRFIFNTGKTYLNYLVELKESLIDD-- 648 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 A S M N+ +K+G+R+ H G G I+ ++ ++S + F Sbjct: 649 --ANEFISDSENSMNKS---NNIKFKIGERIIHKLLGLGVIIGID--NDNSSYMIKFDN 700 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 242/715 (33%), Positives = 380/715 (53%), Gaps = 50/715 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN+KQREAV S+L ++AGAG+GKT+VL +I +L+ + P I+AVTFTNK Sbjct: 9 LLDDLNEKQREAVEYFDSHLRIIAGAGTGKTKVLTRKILYLILEKKVDPSKILAVTFTNK 68 Query: 66 AAAEMRHRIGQLMGTSQGGMW--VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 AA EM+ RI Q ++ V T H ++LR + ++F ILD D+ ++L Sbjct: 69 AAKEMKDRINSKYYDKQKVLFENVFTLHSFCAQVLRKYINLIGFSRNFPILDELDKKQVL 128 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI------QSYGNPVEQTWQKVYQAY 177 + L + + YI+ K+ L + Q G+ V +T VYQ Y Sbjct: 129 QDLYVKNKITNHEVSYSNMAKYISWAKNNLLDQKDLIAELEKQFSGDAVSKTIANVYQDY 188 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 G +DF +L+L L P++ F ILVDEFQDT+++Q+ + + Sbjct: 189 LNYMAEKGALDFDDLILHCKTLLEMHPNVAAKIARYFNYILVDEFQDTSDLQFDILEKII 248 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + ++ IVGD DQ+IY WRGA V+ I F N F ++TI L+ NYRST IL++AN LI Sbjct: 249 DKSSQLTIVGDPDQTIYNWRGASVDLILNFENIFENSKTIVLDTNYRSTKKILASANKLI 308 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 +NN R K L T+ +G I Y AFN EA++V+++IK + + ILYRSN Sbjct: 309 KNNKNRFSKDLITNNDEGNDIEFYHAFNTEAEAQWVISKIKLLKKQKHQIKNIVILYRSN 368 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 SR E+ALL + Y+I+ G +F++R EIKD L++L+ I N+ D A +R++N P RG Sbjct: 369 YYSRAFEDALLGEGINYKIFNGYKFYQRTEIKDVLAFLKTILNK-DSIALKRIINVPVRG 427 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA-SALQRFMELIDALAQETADMP 476 IG +T++ + + +++L+ A +E L + F++++ + P Sbjct: 428 IGPKTVEKIEAFAEKNKISLYDALFTHFKELPLGKEIILKKIYPFIKILRKYQLISEKYP 487 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L V T +++++ EQ KG + Q IEN++EL++ + + +Y E +++ + + Sbjct: 488 LPVITQKLLEELN---YLEQIKGNQNENQNAIENVKELISVSMK-NYFETNKEATAID-Y 542 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--- 591 L+ +L + G+ D V LMT+H++KGLEF VFIVG+ EG+FP+ L++ Sbjct: 543 LNQVSLLSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLTEGVFPNYKHLEDAKENKH 602 Query: 592 ---------LEEERRLAYVGVTRAMQKLTLT------YA------ETRRL-------YGK 623 +EEERRLAYV +TRA + L ++ YA +T R + Sbjct: 603 KTKTELNKGIEEERRLAYVAITRARKNLFVSDSRGSVYAPIIHEKQTSRFIREMGIDFES 662 Query: 624 EVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRH 678 + + S+F L EE E ++ V VSH R G +V+ + Y + + H Sbjct: 663 FLVDKTSKFSRYLSEE--ENKNIKIIVGDAVSHTRFGEGIVQEVNDYDIVVKFVH 715 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 260/724 (35%), Positives = 379/724 (52%), Gaps = 54/724 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D S L LN +Q A +L+LAGAGSGKTR + ++IA L+S ++AV Sbjct: 10 VDDSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHKIDSNRVLAV 69 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAH-------------RLLRAHHMDANL 107 TFTNKAA EM+ RI +L+ + W+GTFH + + L DAN Sbjct: 70 TFTNKAAREMKDRIQKLLNCRKPFTWMGTFHSVCLKLLKLCLAKESVIKALGGKWFDAN- 128 Query: 108 PQDFQILDSEDQLRLLKRLIKA-MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV 166 F I D +DQ R+LK ++K + D ++ I+ K+ L + P Sbjct: 129 ---FSIYDDDDQKRILKEILKDDLGDDYDVNELKKVHSAISRFKNTVLYKNDKAVLQTPD 185 Query: 167 ----------EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTN 216 E+ + Y AYQ+ + +DF +LL + P++ + RERF Sbjct: 186 VAALNAEFADEERKARYYAAYQKKLAESNAMDFDDLLFNTVRMLQMVPNLAEQLRERFQY 245 Query: 217 ILVDEFQDTNNIQYAWIRLLAG-DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAE 275 ++VDE+QDTN++QY ++LL DT V +VGDDDQSIYGWRGA ++ I+ F DF Sbjct: 246 VVVDEYQDTNDVQYELLKLLINRDTKNVTVVGDDDQSIYGWRGANIKIIRNFHRDFAPVT 305 Query: 276 TIRLEQNYRSTSNILSAANALIENN--NGRLGKKLWTDGADGEPISLYCAFNELDEARFV 333 ++LE+NYRST+NI+ A ++I +N + K +++ GE I + + E D A Sbjct: 306 IVKLERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELI--HVRYFEDDRAE-A 362 Query: 334 VNRIKTWQDNGGAL-AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL 392 N KT G A+ AI YR+NAQSRVLE+AL +P I+GG RF++R+EIKD L Sbjct: 363 SNIAKTVAQAGPDFYAKTAIFYRTNAQSRVLEKALNDLRIPSVIFGGTRFWDRKEIKDVL 422 Query: 393 SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAG 452 +YLR++AN DDAA+ RV+NTP R IG T++ V + + + W LL E G Sbjct: 423 AYLRVLANEKDDAAYLRVINTPPRAIGKTTVEGVLAKVKAGEGSFWD---NLLAEANGTG 479 Query: 453 RAASALQRFMELIDALAQ--ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLE 510 R A L+ F +L+ + + PL + + +I D+G + +E RI NL+ Sbjct: 480 RGAPKLKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKEDEVTADERIANLD 539 Query: 511 ELVTATRQFSYNEEDEDLMPLQAFLSHAA-LEAGEGQADTWQDAVQLMTLHSAKGLEFPQ 569 E++ A R+F +E+ L AFL + L G+ + DT + V LMT+H AKGLEF Sbjct: 540 EMINAIREF---DEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFNT 596 Query: 570 VFIVGMEEGMFP-----SQMSLDE-GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 V + G ++ +FP S +S+ E ++EEERRL YVG TRA +KL L +AE R G Sbjct: 597 VHLAGCDDEIFPLVRGTSMLSMAEINEQMEEERRLFYVGCTRAEKKLYLYHAERRFFQGN 656 Query: 624 EVYHRPSRFIGELPEECVE---EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAK 680 PSRF+ EL V+ + R +V V + R P + G R + Sbjct: 657 IRPFAPSRFLKELDPSVVDFTPCLNTRPSVPDFVGNTR-SKPSYGSYGSSNYGSRPSYGN 715 Query: 681 FGEG 684 G G Sbjct: 716 SGSG 719 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%) Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI-KWLVAAYARLESV 720 P +E D+ Y G RVRH+++G G I+ GSG+++R+ V F + + + ++ YA LE + Sbjct: 783 PTIEYDNPYHEGARVRHSRYGTGVIMKAYGSGDNARVDVRFDRENMNRTIILKYAALEVI 842 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 238/652 (36%), Positives = 369/652 (56%), Gaps = 12/652 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L LN Q EAV+ + LLV AGAGSGKTRV+ +RIA ++ I+A+ Sbjct: 1 MSLTGPLMKLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +FTNK+A EM R+ +++ + G+ + TFH L ++L+ H + F + + DQ Sbjct: 61 SFTNKSAKEMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 + L+K+ LD K+ PPR+ + I+ K+ + P G + +++ Y++ Sbjct: 121 EAFVSDLLKSKRLDPKKVPPREILRRISYAKNTQVHPKDNGLTGE-FDLVAAEIFPLYED 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +DF +L+L L P I +Y+ + LVDEFQDTN +QY ++ L G+ Sbjct: 180 GLKEKNAIDFDDLILLPKRLLAEFPEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGN 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + + +VGDDDQSIY +RG+ V+ I F +FP A+ +RL +NYRSTS I+ AAN+LI+N Sbjct: 240 SDNLCVVGDDDQSIYAFRGSNVQLILNFEREFPHAKVVRLLENYRSTSLIIQAANSLIQN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNA 358 N GR K L++ E + Y +E +EA FV RI+T N E AIL+R+N Sbjct: 300 NIGRKEKTLYSRIPSAERVEYYETADEREEAIFVAGRIQTLLIKNEFKGKEIAILFRTNF 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EE L S+PY++ GG FF+R+EI+D +SYLR +AN DD + R++N P RGI Sbjct: 360 QSRPFEEELRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYPKRGI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQE----KALAGRAASALQRFMELIDALAQETA- 473 G T+ +++ + +L+L++ ++++ + + + +F+E++DA ++ A Sbjct: 420 GPGTMQKLQEEAFTHKLSLYEIFHKMIESPDYLPEVKAKVRQEIYQFVEMVDAFKKKFAM 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKG--QTRIENLEELVTATRQFSYNEEDEDLMPL 531 L +I G E+ E+ + RI NL ELV F E E + Sbjct: 480 SQKLAPVLREMITQIGFEREISMEETEEKVVKARIYNLSELVNMLSFFEEEEGREGKATI 539 Query: 532 QAFLSH-AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP-SQMSLDEG 589 FL L E + D VQL+T+H +KGLE+ VF+VG+EEG+ P S++ +EG Sbjct: 540 FDFLQRLVLLMEDEPKEDEEDRRVQLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEG 599 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 ++EERRL YVG+TR +KL LT A TRR +G+++ PSRF+ EL ++ V Sbjct: 600 EVVDEERRLLYVGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAV 651 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 227/629 (36%), Positives = 353/629 (56%), Gaps = 24/629 (3%) Query: 3 VSYLLDSLNDKQREAVAAPR-SNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 V L LN +Q AV P + LL+LAGAG+GKT VL+ R+ L+ + P I+A+T Sbjct: 23 VPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMT 82 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTN+A EM++R+ +G + + TFH +LR H LP DF ILDS + Sbjct: 83 FTNQAIQEMKNRLACYLG--EKIPRIQTFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEA 180 ++K+L+K + +D+K + P + + I+ ++ G P I QS + + +Y Y Sbjct: 141 IIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAY 200 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL---- 236 + DF L+++ E+ L+ PH+L+ Y E+ I+VDE+QD N QY +RLL Sbjct: 201 LQKTKSCDFGGLIIKTIEV-LHHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKE 259 Query: 237 -AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + ++ VGD++Q IY WRGAQ +I F DF A I+LEQNYRST++IL+ AN Sbjct: 260 DSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANK 319 Query: 296 LIENNNGRLGKKLWT--DGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 LI +N R KKL+T D D +S++ + ++ E ++ I Q+ G +L AIL Sbjct: 320 LISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAIL 379 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 R++ Q+R E+A L+ +P+++ GG F++RQEI+DAL+Y RL+ + D F+R++N Sbjct: 380 VRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINC 438 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG +L ++ + ++L QA +L+ + +LQ F++ I + Sbjct: 439 PKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSK 498 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEK-GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 M + +++ SG M++ K EK Q R++NL EL++ + L+ Sbjct: 499 KMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHE---------TLE 549 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 F+ A L G + +Q+MTLH+AKGLEF VFI G E+G+ P Q+S++EG + Sbjct: 550 GFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINEGN-V 608 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLY 621 E ERRLAYVG+TRA +K L Y RR + Sbjct: 609 EGERRLAYVGITRAKKKCHLFYTINRRTH 637 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 241/653 (36%), Positives = 362/653 (55%), Gaps = 34/653 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD+LN +Q++AV + LLVLAGAGSGKT V++ +I++L+ SI+AVTFTNK Sbjct: 1 MLDNLNQQQQQAVKYIATPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSILAVTFTNK 60 Query: 66 AAAEMRHRI-GQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+ +L G+ + TFH L +L+ H + ++F + DS D L L Sbjct: 61 AAKEMQERVKSRLDKEKSKGLMISTFHSLGLSILKKHFNELGYKKNFTLFDSHDSLAL-- 118 Query: 125 RLIKAMNLDEKQWPPRQAMWY---INSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 I + DE Q P + A + I+ K L P ++ + +E+ +YQ YQ+ Sbjct: 119 --IYDIAYDEYQLPKQNASFIQAKISFWKSALLTPDQVKP-KDELEEQAAFIYQEYQKYL 175 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 DF +L+ + +L+ N +I + + ++F IL+DE+QDTN QY ++ L Sbjct: 176 KSYNSFDFDDLIFQPIQLFRNHSNIQKLWADKFRYILIDEYQDTNESQYQLLKYLTLGKN 235 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 K +VGDDDQSIY WRG++ EN++ DF + I+LEQNYRST IL+ AN LIENN+ Sbjct: 236 KFTVVGDDDQSIYAWRGSRPENLRHLQEDFADLKVIKLEQNYRSTGRILNVANKLIENNS 295 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFV-----VNRIKTWQDNGGALAECAILYRS 356 KKLW++ GE I + N+ DEA+F+ +R+KT N ++ A+L RS Sbjct: 296 HIFDKKLWSNKDYGEQIKVISLINDEDEAQFIASDIFFDRVKTKSKN----SDYAVLIRS 351 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N Q+ +LE + +PY I GG FF + EIKD +SYLRLI N +DD AF RV+NTP R Sbjct: 352 NYQAYLLERYMQMHKIPYTISGGSSFFSKAEIKDIISYLRLIVNPDDDRAFLRVINTPKR 411 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 +G T+ + + + + + L+ L L F +LI Q+ + Sbjct: 412 EVGSATVHKLGEYASQHHCSFFHTLYS-LENFELRDFTKRNLISFKDLI-LNTQQQINTS 469 Query: 477 LHVQTDRVIKDSGLRTM-YEQ------EKGEKGQTRIENLEE----LVTATRQFSYNEED 525 + VQ + I +S + + Y Q ++ + R N+ E +V SYN + Sbjct: 470 ISVQELKNIINSFIDNISYRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDESYNGLE 529 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 L L L+ D + VQ++T+H++KGLEF +V+I+GMEEG+ P Q S Sbjct: 530 SLATVLNKMLLIDILD--RDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQS 587 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 + E +E+ERRLAYV +TRA + LT+T + R+ +G++ PSRFI ELPE Sbjct: 588 I-EDDSIEDERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPSRFIDELPE 639 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 248/656 (37%), Positives = 349/656 (53%), Gaps = 29/656 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q AV S LLVLAGAGSGKTRV+ +I +L+ + + AVTFTNKAA E Sbjct: 9 LNAQQSAAVRHLESPLLVLAGAGSGKTRVITEKIVYLIEKQGIPARQVFAVTFTNKAAKE 68 Query: 70 MRHRIGQ-LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M R + L + G+ + TFH L +R + L F + DS+D L L K LI Sbjct: 69 MVARTAERLPPERRRGLNISTFHTLGLNFIRREYAALGLRAGFTVFDSDDSLALFKSLIG 128 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VYQAYQEAC 181 + P+ A W I+ K++ P Y + W + ++ YQ Sbjct: 129 HSEYKDV-IEPKAAQWQISQWKNDLRTPQ--SCYEQAKNEGWDEETRALAGLFDQYQRQL 185 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +L+ R EL + + + ++ R +LVDE+QDTN QY +RLL G G Sbjct: 186 TACNALDFDDLIGRPVELLQSDAAVRERWQARVRYLLVDEYQDTNTTQYELVRLLVGKIG 245 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDD QSIY WRGA+ EN+ R +DFP I+LEQNYRS +++L AAN LI + Sbjct: 246 ALTAVGDDHQSIYAWRGAKPENLNRLADDFPNLHRIKLEQNYRSVNSVLKAANHLIALDT 305 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQS 360 K+LW+D GEP + A DEA + I + A+L+R N Q+ Sbjct: 306 TTASKQLWSDIGMGEPHRVIVAATAEDEAERIATEILHRHFRAQTEYRDFAVLFRGNHQA 365 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R++E+AL + ++PY + GG FFER EIKDA+SYL+L+ N +DDAAF RVVNTP R IG Sbjct: 366 RLIEQALRKLNIPYSLTGGQSFFERAEIKDAMSYLKLLVNPDDDAAFLRVVNTPRREIGP 425 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLHV 479 T++ + +R+R+ +L+ A R + + RAA L RF + +D + AQ D + Sbjct: 426 TTIEKLGGFARERRSSLFAAARSIGIQSVFDNRAADRLNRFCDWLDGIRAQPDRDAIDVI 485 Query: 480 QT--DRVIKDSGLRTMYEQEKGEK-GQTRIENLEELV--------TATRQFSYNEEDEDL 528 Q D + + LR EQE K R +N+EE + T S E Sbjct: 486 QQVFDAIDYPAYLR---EQESTPKAADRRWQNVEEWLDWLAKISDTQVEAESEGGESATK 542 Query: 529 MPLQAFLSHAALEAGEGQADTWQD--AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 M L A L Q +D AV L+TLH+AKGLEF VF+ GMEE + P + + Sbjct: 543 MDLPALAQRMTLLGILDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCI 602 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 ++ RL EERRL +VG+TRA LT T + RR YG+ PSRF+ ++P + ++ Sbjct: 603 EDEARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDIPADLLQ 658 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 240/653 (36%), Positives = 363/653 (55%), Gaps = 28/653 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S+ ++SLN QR+AV + +L+LAGAG+GKTR + RIA ++ SP SI+AV Sbjct: 1 MAKSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVD-RGISPKSILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+GQ++ + V TFH L R+LR +F I +Q Sbjct: 60 TFTNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L++RLI ++ P+ + ++ K+ GL I+ + + +YQ Sbjct: 120 SGLIRRLIVRHGGITEKITPKDVLSSMSRMKNSGLGLDSIE------DNLTANIAASYQR 173 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +LL+ A +L + + +++RF I VDEFQDTN++Q + + L G Sbjct: 174 ELQAQNSVDFDDLLILADKLLKEHRDVREAWQQRFRYITVDEFQDTNSLQMSLLGHLVGP 233 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGDDDQSIYGWRGAQ+ NI F FP I+LE+NYR T+ IL ANALI + Sbjct: 234 EHNVCVVGDDDQSIYGWRGAQISNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRH 293 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNA 358 N GR K L GE + L + +EA F++ I+ + G + AIL+R+N Sbjct: 294 NLGRRDKTLRAHKGGGEAVRLISMPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANT 353 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR++E+ L + +PYR+ G FF+R+E+KD +SYL I N D R++NTP RGI Sbjct: 354 QSRIIEQTLREHKIPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPPRGI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 + T +V SR+ ++W A ++ AL+ RA +++Q F ELI + D+ Sbjct: 414 SELTSHLVIDWSREHGNSVWAALQDEEFLAALSTRARNSVQAFNELI----AKYIDLFQD 469 Query: 479 VQTD------RVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 +TD ++I+++G + + + Q R+ ++ ++ + R F + Sbjct: 470 KETDFGDILEQLIEETGFSEYVTRLCKTEAEIQKRLVSIGDVKASLRNFWQPGK-----T 524 Query: 531 LQAFLSHAALEAGEGQADTW-QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L+ +L+ L+ + D + V L+T+H+AKGLEFP V++VG+EEG+ P + SL E Sbjct: 525 LRDYLAQVTLDKEDNDDDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSL-ED 583 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G +EERRL YVG+TRA +KL LTY TR YG + + S F+ E+P +E Sbjct: 584 GNCDEERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLME 636 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 247/710 (34%), Positives = 386/710 (54%), Gaps = 35/710 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 V+ ++SLN QREAV + ++AGAGSGKTRV+ ++IA+L+ N P+ I AVTF Sbjct: 2 VNEFIESLNPNQREAVLRITGPVRIIAGAGSGKTRVITNKIAYLIKYANLQPWRICAVTF 61 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKA EMR RI +++G S + T+H L R+LR + N + F I+D DQ + Sbjct: 62 TNKATNEMRTRIVEMIGNSGQRCMIATYHALCVRILREDIIHLNYDRYFNIIDMADQDSI 121 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 ++ + K + + + +I+ K++ + P+ ++ N E W +VY Y++ Sbjct: 122 IRNIYKRLPMKYDAQEAKMVKNFISKLKNDFISPNSAKTSVNGDEMRWAEVYDTYEKRLR 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 VDF +L+L ++L+ N +L+ ++ RF LVDEFQDTN +Q+ I+ L GD Sbjct: 182 EINSVDFNDLILLTYKLFKNNGEVLKKWQNRFDYFLVDEFQDTNELQFDIIKWLVGDNSN 241 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRGA++ I F FP +TI L +NYRST +ILS AN LI +N Sbjct: 242 ITIVGDPDQTIYSWRGAKINLILNFDKYFPHTQTIVLNENYRSTQSILSLANNLIIHNKN 301 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSR 361 R+ K L+T A G+ LY N DE+ FV +IKT ++ + ILYR+N SR Sbjct: 302 RIEKNLFTIKASGQLPILYHGANSSDESDFVARKIKTLIKEENYDYNDILILYRANYLSR 361 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 LE AL + YRI+G +F+ER+EIKDAL++L++I N ND A ER++ + IG + Sbjct: 362 DLETALADYGISYRIFGAFKFYERKEIKDALAFLKIIMN-NDFLAIERILLLIPK-IGPK 419 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFME-LIDALAQETADMPLHVQ 480 T + + Q +D+Q+ + L +L + E ++ ALAQ +P Sbjct: 420 TFEQIMQILKDQQIMFTTLLEQHFD--LLPLNLQHSLNKVREAIVLALAQ----LPTVKS 473 Query: 481 TDRVIKDSGLRTMYEQE-KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + ++ +T Y Q + + R EN+ EL+ + +F ++++++L + + Sbjct: 474 IESLLVLLLDKTGYLQRLRDNYEEEREENILELIASIGKF--DQQNKELAGTELLSEYLQ 531 Query: 540 LEAGEGQADTWQD-AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERR 597 L + + +D D + LMT+H+AKGLE VFIVG+ EG+FP+ ++ G +LEEERR Sbjct: 532 LISLQTDSDNLTDNTISLMTIHNAKGLEKKVVFIVGLNEGIFPTTQAIKMGTEQLEEERR 591 Query: 598 LAYVGVTRAMQKLTLTYAE-TRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS- 655 YV +TR+ + L ++YA+ + G E + SRFI EL + E+V S+P S Sbjct: 592 ALYVAITRSEELLFISYADGYSYITGNERFE--SRFIKELDNDFYEKVNSERLFSKPKSI 649 Query: 656 ----------HQRMGTPMVENDSG------YKLGQRVRHAKFGEGTIVNM 689 R + +N +K+ V H FG G +V + Sbjct: 650 TISYNNKSEKQSRTVFNLNKNIESTFKTNLWKVNDTVSHELFGIGVVVKI 699 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 233/656 (35%), Positives = 373/656 (56%), Gaps = 44/656 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ +LN Q+ AV +LVLAGAGSGKT+VL RIA+L+ + P+ I+A+TFTNK Sbjct: 9 LMGTLNSSQQRAVLTTEGRVLVLAGAGSGKTKVLTTRIAYLLQ-QGVDPWRILAITFTNK 67 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA--HHMDANLPQDFQILDSEDQLRLL 123 +A EM+ R+ M + W+GTFH + +R+L HH+ ++ F ++D DQ L+ Sbjct: 68 SAKEMKERVTG-MDSRASKSWIGTFHSICNRILSTNIHHLGMDM---FTLMDDTDQKALV 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEAC 181 K + L+ + + I+ K+E + P QS G+ + +YQ Y++ Sbjct: 124 KTAAVQLGLEADKNIVYNLLSQISLWKNEAISPGQAQSNSTGDKEKLAVSHIYQKYEDLK 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 D+ +LLL+ L+ N P +L Y+ F +LVDEFQDTN IQ+ I +L+ G Sbjct: 184 AIHNYFDYDDLLLKTVHLFQNNPELLGRYQNLFRYVLVDEFQDTNKIQFDLIEMLSQKHG 243 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIY +R A++ENI + P + I L++NYRST NI++A+N+L+ NN Sbjct: 244 NIFLVGDADQSIYSFRSAKIENILSYQKIHPETQLILLQENYRSTQNIVNASNSLVGNNK 303 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDE-----ARFVVNRIKT----WQDNGGALAECAI 352 RL ++ ++ G+ I ++ FN+ AR +VN K W+D A+ Sbjct: 304 MRLEREAFSVSGVGDDIHVF-RFNDASREADFVARMIVNMKKATQCDWKD-------FAV 355 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR N QS+ LE AL ++PY+I G F++R+EIKD +SY+R N DD A ERV+N Sbjct: 356 LYRMNFQSKHLELALRDENIPYKIVGTTSFYDRKEIKDLVSYIRASHNLTDDYALERVIN 415 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P+R IG T++ + + +R++ + A + + + AL+ S + + E L QE Sbjct: 416 VPSRKIGKTTIEKIYAFAHERRIPFFVALQNIDEVAALSKINKSTVAKIKEFA-TLMQEL 474 Query: 473 ADMPL--------HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE 524 + + L +QT +IK + +++EK E+ +TRIEN+ L R ++ + Sbjct: 475 SQLALVGEFSATKFMQT--LIKKTDFMGQFDKEK-EEDETRIENVTHLRDYARH--WDAQ 529 Query: 525 DEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM 584 ++++ L F+S L+ + + D V L ++HSAKGLE+P+ F++G+E+ +FP Sbjct: 530 EKEINSLAQFVSEITLDGDSDEDEE--DFVTLTSVHSAKGLEWPETFVIGLEDDVFPHYR 587 Query: 585 SLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG--KEVYHRPSRFIGELPE 638 S + LEEERRL YV +TRA ++L LT++ + YG K + +PS F+GE+P+ Sbjct: 588 SKQKLSDLEEERRLMYVAMTRAGKRLYLTHSAFKYEYGSQKPIRQKPSPFLGEIPD 643 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 239/723 (33%), Positives = 380/723 (52%), Gaps = 55/723 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + + LN+ Q +AV +L+LAGAGSGKT +V R+A+L+ + + +TFTNK Sbjct: 4 IFEKLNNSQTDAVKQTEGPVLILAGAGSGKTTTIVSRLAYLIEGIGIPASNTLTLTFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R +M + TFH L+ + +F ++DS+D+ KR Sbjct: 64 AAKEMRERASNMMSNLAYPPLLCTFHKFGLLFLKFNIHLLGRQNNFVVIDSDDK----KR 119 Query: 126 LIKAMNLDEKQWP--PRQAMWYINS--QKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 +IK +N E P + Y NS D+ + +Y Q K+Y+ Y+ Sbjct: 120 IIKKIN-SELATPLIASEISRYKNSLLTPDDAYKQAEFFNY-----QQIAKIYEEYENYL 173 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 LVDF +L+ +L P + + +++ I+VDE+QDTN +Q ++ L Sbjct: 174 LENNLVDFDDLIALTFKLLDENPELARTTSDKYRYIMVDEYQDTNELQLKLLQKLCSTHN 233 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIYGWRGA + NI F DF G +LE+NYRS IL ANALIE+N Sbjct: 234 NICVVGDDDQSIYGWRGAHIRNIMEFDQDFIGTSVFKLEENYRSREPILKVANALIEHNR 293 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 RLGKKL GE I++ + +E +EAR + ++ D+G + A+LYR N SR Sbjct: 294 SRLGKKLIPTRGGGEDITILNSSDENEEARKIATKVNKLLDSGVKAEDIAVLYRVNVLSR 353 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E+ L +A + Y++ GG+RF++R EIKD +SYLR+I N +DD +F+R+VN P RG+G Sbjct: 354 SIEDGLNRAGIAYKLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKPKRGMGKA 413 Query: 422 TLDVVRQTSRDRQLTLWQACRELL---QEKALAGRAASALQRFMELIDALAQETADMPLH 478 ++D + + + ++++ ++ E + + A L++F++ I ++A + + Sbjct: 414 SVDKIELAAHANETSIFEYIEKIAITDLETLVKSKNAKTLKKFVKDIRSVANAAKESTYN 473 Query: 479 VQTDRVIKDS-GLRTMYEQEKGEKGQT-RIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 +++D+ L+ +Y KG + R+ N++E R F N L FL+ Sbjct: 474 FID--ILEDTFHLKDIY---KGLPDEVERVLNMDEFYGLFRDFIKNSPS---ASLDEFLN 525 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 L++ + Q + D++ +M++H++KGLEF +FI+G+EEG P + +G LEEER Sbjct: 526 ELTLQSEQDQVE--GDSIYMMSIHASKGLEFDHIFIIGLEEGFLP---LVGDGSDLEEER 580 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE--LPEECVEEVRLRATVSRPV 654 RL YV TRA LTL++ ++R G+ + SRF E L E Sbjct: 581 RLGYVSFTRAKDTLTLSHVDSRFYKGRRSDLQKSRFFNEAGLCE---------------- 624 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 G+ +VE ++ +K G VRH FG G + + SG +L + F G L + Sbjct: 625 -----GSLIVEKNTAFKKGDLVRHKIFGTGRVNGVSKSGREFKLNINFAGTKRDILASFV 679 Query: 715 ARL 717 RL Sbjct: 680 ERL 682 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 231/697 (33%), Positives = 384/697 (55%), Gaps = 35/697 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L++LN Q +AV + V+AGAGSGKT+ L R A+++ + +I+ VTFTNK Sbjct: 5 ILENLNPSQLQAVKTTEGYVRVIAGAGSGKTKALTSRFAYIVDRLGINSSNILCVTFTNK 64 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+G + ++ T+HG R LR + P++F ILD+EDQ +L+ Sbjct: 65 AAQEMKKRVKALIGDTYDLAFITTYHGFCVRFLREEINKIHFPKNFIILDAEDQKSILRD 124 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQK-----------DEGLRPHHIQSYGNPVEQTWQKVY 174 + + ++ K +Q + +I+ QK ++G P +P + +++ Sbjct: 125 IFNELQINSKHLTFKQVLRFISKQKSTSNYLGYILENKGFEP-------DPSDSLSSRIF 177 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 Q Y + R +DF +L+ + + P +L +++ I VDE QD++ Q+ + Sbjct: 178 QIYLDKLKRNYALDFDDLIHFTAFILDHNPDVLLKWQQNLHYIQVDEAQDSSENQFHLVE 237 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +L+ + +VGD DQ+IY WRGA+ E + F + FP +TI + +NYRST NIL N Sbjct: 238 ILSRVHQNLFLVGDPDQTIYEWRGAKPEYLVEFDSMFPDTQTIIMNRNYRSTPNILKIGN 297 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAIL 353 +I+NN R+ K + TD +G + + N+ +E++++ + IK Q A ++ IL Sbjct: 298 HIIKNNTVRVDKDMITDKPEGFEVVHFHGKNDFEESQWIASEIKEILQAEQAAYSDITIL 357 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YRSN SR +E+AL++ ++PY I+GG+RFFER+EIKD LS LRLI + D+ +F R+ N Sbjct: 358 YRSNHLSRNIEQALIKDNIPYSIFGGIRFFERKEIKDVLSLLRLIV-QGDNFSFLRMHNH 416 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RG+G + L+ + + ++ L+L QA + +K LA + A F+ELI L + Sbjct: 417 PARGLGKKFLERLSLLAGEQNLSLLQALERNITDKELAKKGAV---EFLELIAELRETAK 473 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + ++ SGL +Y ++ E R+EN++ELV + +E+ + + Sbjct: 474 TKSISDLVKIILDKSGLSELYRKDGDED---RLENIKELVNS--MLLLEKENNAPVDIIE 528 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGR 591 +L +L QD V+LMT+H +KGLEFP VF+ G EG+ PS +S+ E Sbjct: 529 YLQEISLYTDLNTDTENQDKVKLMTIHISKGLEFPYVFLCGFTEGVLPSALSVKERRARA 588 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC-VEEVRL-RAT 649 +EEERRL YV VTRA ++ +T +E + + PSRF+ E+ +E V + +L + Sbjct: 589 IEEERRLMYVAVTRAEKRFYMTDSEGFN-FTTGLNKYPSRFLFEIKDEFYVRKGKLSQQI 647 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTI 686 + +HQ G ++ ++ +K G V H + +G I Sbjct: 648 IENSRNHQSPG--QLQENTAFKEGDFVMHPVWNKGKI 682 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 247/717 (34%), Positives = 379/717 (52%), Gaps = 60/717 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L + LND Q++AV+ +L+LAGAGSGKT+ + R+A+L+ ++ + +TFTNK Sbjct: 3 LFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLIGEVGIPSHNTLTLTFTNK 62 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA MRHR + + + TFH L+ H F ++D++D +++K Sbjct: 63 AANVMRHRALNFLQGNHNPLLC-TFHKFGLLFLKLHFERLERKNSFIVIDTDDTKKIIKD 121 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEG------------LRPHHIQSYGNPVEQTWQKV 173 LI N D + YI+ K+EG L+ H+ + Y N E + Sbjct: 122 LIHDKNKDN----VYDIIQYISYCKNEGKRVSNVFEDLNLLKEHNFEKYQN--EYKFANY 175 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+AY+E + VDF +LLL ++ + N + + + I VDE+QDTN +QY + Sbjct: 176 YRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNYITVDEYQDTNTLQYKIL 235 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 + L + +VGDDDQSIY WRGA++ENI F NDF + ++LEQNYRS IL AA Sbjct: 236 KNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNVKLVKLEQNYRSVGTILQAA 295 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 N LI +N RLGK L GE I + NE DE ++ +K ++G E AIL Sbjct: 296 NNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVKKLLNSGVEAKEIAIL 355 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 +R NA SR +EEA ++ + Y++ GMRF+ER EIKD +SYLRLI N +DD +F+R++N Sbjct: 356 FRVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKDLISYLRLILNPSDDLSFKRIINR 415 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRE------LLQEKALAGRAASALQRFMELIDA 467 P R IG++ L + + ++ RQ++L+ A E +L K +A + F++ I Sbjct: 416 PKRSIGEKALKNLEEYAKKRQISLFDALCESDGGVGILTTK----KAQNEANIFIQNIHT 471 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 L + + + K ++ + ++ + G RI NL+E R+ E+ E Sbjct: 472 LKSYDNAKKVFDNIEELFK---IKDYFSEQ--DDGDERIRNLDEFYANLRE-KLKEDPE- 524 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L+ LS +L + + D ++ V LM++H++KGLEF VFI+G +EG FP Sbjct: 525 -ASLEDLLSEISLLSDQDNLD--EECVCLMSIHASKGLEFDYVFIIGFDEGFFPLNSE-- 579 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR 647 LEEERRLAYV +TRA + LT++ A +R +G PSRF+ EE +L Sbjct: 580 --ENLEEERRLAYVAITRAKKLLTISVANSRFYHGSRANINPSRFL--------EESKLI 629 Query: 648 ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 S+ + Q+ + + G V+H FG G +V + SG+ +L + F G Sbjct: 630 NEKSKNQNIQK---------TSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGG 677 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 238/701 (33%), Positives = 369/701 (52%), Gaps = 39/701 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN KQ EAV + + V+AGAGSGKTR L HR A+L++ P +I+ VTFTNK Sbjct: 32 LLCQLNQKQLEAVTSTEGFIRVIAGAGSGKTRALSHRFAFLVNEIGILPGNILCVTFTNK 91 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMRHRI L+ + G ++ TFHG +L+ P++F +LD++D +LK Sbjct: 92 AANEMRHRIHNLIADNDTG-YINTFHGFCVSILQEDSHAVQYPKNFLVLDNQDIDSMLKI 150 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK----------VYQ 175 + + L + +A I K E +++ ++ QK ++ Sbjct: 151 IYEERGLTLRHKTFSKARDMIEMYKLERYPNYYLDLITMSLDTLRQKYLGATDVNDIIFY 210 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y + +D+ +LL + ++ I +++R I++DEFQD + IQY +++ Sbjct: 211 GYLYQEKKCFGLDYNDLLKFSLYIFEKNKEIRLKWQKRLEYIMIDEFQDIDKIQYQLMKV 270 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L G + IVGD DQ+IY WRGA + + F FP +TI + +NYRST ILS N+ Sbjct: 271 LCGYHKNLFIVGDPDQTIYSWRGADINYLLNFDKAFPDVKTIMMNENYRSTPQILSVCNS 330 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI+ N R+ K L + Y +E+ ++ ++I + + ILYR Sbjct: 331 LIDKNKNRMKKDLLPMCHSKNSVLYYHGDTSEEESDWIADQIIKLHKKDISYKDITILYR 390 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 ++ +R LEE LL+ +PY IY G++FFER E+KDALSYLR+I + DD +F R+VN P Sbjct: 391 AHYVTRTLEETLLKKKIPYSIYSGIQFFERMEVKDALSYLRMITYK-DDLSFLRIVNVPK 449 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA----QE 471 R IG + ++ ++ + ++A +E +++ G A + F+ LIDA + Q Sbjct: 450 RNIGKKRMEFLQAYVNAHHCSFYEALKECVEDPIFKGTDA---KDFISLIDAFSVTYEQR 506 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 T L DR + LRT QE R++NL EL A + + +E L+P Sbjct: 507 TISEVLSDILDRSGYEEMLRTTGNQE-------RLDNLAELKQAVYDYEISCGEEALLP- 558 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS-QMSLDEGG 590 +L H AL D D V+LMT+H+AKGLEFP VF+ + EG+FPS + S EG Sbjct: 559 -DYLDHIALFTNSDVTDD-SDKVKLMTVHAAKGLEFPHVFLCALNEGIFPSKKTSTIEG- 615 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR----- 645 +EEERRLA+V ++RAM+ L L+ + + G Y PSRFI ++ ++ +E V+ Sbjct: 616 -MEEERRLAFVAMSRAMKSLFLSESHGKNFDGSTRY--PSRFILDIDQKFLEYVKKPEDT 672 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTI 686 L A + + + +++G ++ H FG+G I Sbjct: 673 LIAETKNYIHYSNRYLDGYVAEQTFQVGDKIIHNVFGQGRI 713 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 249/639 (38%), Positives = 360/639 (56%), Gaps = 33/639 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN+ Q +AV LLVLAGAGSGKTRV+ RIA L+ + ++I AVTFTNKAA E Sbjct: 9 LNEAQYQAVYYRNGPLLVLAGAGSGKTRVITERIAALVE-RDVPDHAITAVTFTNKAAKE 67 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R+ Q +G G+ + TFH L ++R H + + +Q +++ ++ Sbjct: 68 MRERLQQRLGDKANGLRICTFHALGLAMVREHADLVGRKANVSVFAGAEQKTVMRSVLSE 127 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 M L + + ++S K L H E + + Y ++ VDF Sbjct: 128 MKLAADADQVDRMLSRVSSLKSGLLEVH---------ENQLAAIRETYDALLEKMNAVDF 178 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +LL+ L ++ +RER LVDE+QD++ IQY +RLL D G + +VGDD Sbjct: 179 DDLLVLPLRLLSEHDNVRAIWRERARYFLVDEYQDSSRIQYQLVRLLVPDDGNLTVVGDD 238 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIYGWRGA+V+N+ + D+ +RLE+NYRST +IL A+N+LI NN+ RLGK L Sbjct: 239 DQSIYGWRGAEVKNLFQLERDYTNLHVVRLEENYRSTGSILQASNSLIANNSERLGKTLR 298 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALL 368 + G+PI ++ + N +EAR + IK+ +GG +LYR++ QSR +E AL Sbjct: 299 STLGQGKPIRVWGSPNPEEEARRLAGDIKSHHARSGGQWDAYCVLYRASFQSRSIELALR 358 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 +A +PY + GGM FF+R EI+D L+YLRLIAN +DD AF R + P RGIG + L + Sbjct: 359 EAGIPYHVSGGMSFFDRAEIQDILAYLRLIANFSDDLAFMRAIARPRRGIGSKALGDLGF 418 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE----TADMPLHVQTDRV 484 + +L +AC L+E+ L + A AL+ F ++I L + D D Sbjct: 419 FAMAEDCSLLEAC---LKEE-LDHKRAEALREFGDMIVGLEHQFRHGEPDDAFDAVLDLT 474 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDLMPLQAFLSHAALEA 542 ++ +R E + E + R+ N+ EL R++ + E DL FL H L A Sbjct: 475 RLEAAIRA--EADDQEVAERRMSNVLEL----RRWWVIHTERGGDLTE---FLQHIFLLA 525 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 E Q D V+LMT+H+AKGLEF QV+++GMEEG+FP + +LDE R+EEERRL YV Sbjct: 526 -EKQDDDPSGQVRLMTVHAAKGLEFDQVYVIGMEEGIFPHRNALDE-NRMEEERRLMYVA 583 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +TRA LTL+Y+ TRR +G PS F+ E P++ V Sbjct: 584 MTRARFLLTLSYSLTRRRFGTIEKCAPSPFLKE-PDQSV 621 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 235/730 (32%), Positives = 395/730 (54%), Gaps = 54/730 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN +Q+EAV A LV+AGAG+GKT VL RIA+L++ +N P I+ TFTNKAA E Sbjct: 10 LNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTNKAADE 69 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ R+G+ +G S ++ TFH + ++L+ N + +I+D++DQ LLK + Sbjct: 70 MKERVGKTIGVSIP--YLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEIFDQ 127 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVE----QTWQKVYQAYQEA 180 +N+++K ++ + I+ K++ + + Y V+ Q +Y+ Y + Sbjct: 128 LNIEKKSQVIKKIIKTISKVKNKFFDQNDMLNEKNHKYLELVDLNDAQRLVDIYKIYCDR 187 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C + VDF +L+ H+L++ P +L+ ++ +F ILVDEFQDTN IQY I LLA Sbjct: 188 CFKLNYVDFDDLINLTHKLFIEFPEVLEKWQNKFDYILVDEFQDTNKIQYDLISLLATKH 247 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQ IY +RGA+ I F +F + L+ NYRST IL+ AN LI+ N Sbjct: 248 QNLFVVGDPDQMIYSFRGAEQWIINNFSQNFKNTKVTILKTNYRSTQPILNTANRLIDAN 307 Query: 301 NGRLGKKLWTDGADGEPISLYC-AFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N K L + + +Y N +DEA ++ +I+ + G + A+L+RSN Sbjct: 308 NNNYKKNLTAFNTNDNNLPIYLRGQNPIDEANWIARKIRELLEEGTPANQIAVLFRSNHY 367 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR +E+++++ S+PY I G +F+ER EIKD ++YL+++ N D+ +F R++NTP R IG Sbjct: 368 SRTIEQSMMRESIPYTILGSKKFYERAEIKDMIAYLKVV-NDLDELSFLRIINTPRRAIG 426 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T + V+ + + L L++A E+ + + + F+ LI + E D+ +H Sbjct: 427 PTTFEHVKHYAINNNLFLFEALAEVEKNHLINNTQKKNILNFVNLIKEIRDEMEDLKIHE 486 Query: 480 QTDRVIKDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + + K + YE + EK + +I+N+ EL A + + D+ + +L+ Sbjct: 487 ILELIYK----KVNYEAYLLENEKAEDKIDNVYELKRAMKMYVDRHPDD---TINDYLNS 539 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--GRLEEE 595 AL + D+ ++ V LMT+H++KGLE+ VF+ GM EG+ PS ++++ +EEE Sbjct: 540 IALYLNKDGKDS-KENVLLMTVHNSKGLEYENVFVAGMNEGLLPSDRAINDDPIKGVEEE 598 Query: 596 RRLAYVGVTRAMQKLTLTYAETRR-LYGKEVYHRPSRFIGEL----------------PE 638 RR+AYV +TRA + L ++ A L ++V+ SRFI E+ PE Sbjct: 599 RRIAYVALTRAKKNLYISSACCYDPLARRQVFE--SRFINEIGFNNLKIINSSFKNNKPE 656 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVEND------SGYKLGQRVRHAKFGEGTIVNMEGS 692 + + L+ R + VE++ + +++G+R+ H FG+G I+ ++G Sbjct: 657 DMPLKSFLKQQEERSWFDSKQKQKEVEDNFYQTMKNDFEIGERIVHTSFGDGVIIGIDGD 716 Query: 693 GEHSRLQVAF 702 L +AF Sbjct: 717 I----LTIAF 722 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 234/652 (35%), Positives = 367/652 (56%), Gaps = 25/652 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L SLN QREAV LLVLAGAGSGKTRV+ HRIA LM + P I+A++FTNKA Sbjct: 3 LSSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLMEL-GTQPEEIVALSFTNKA 61 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++G ++ + +GTFH L R++R +P FQILD D +++ Sbjct: 62 AEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDVNGIVRA 121 Query: 126 LIKAMNLD----EKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQE 179 L++ +K+W + I+ K++ L ++ N ++ ++Y+AY + Sbjct: 122 LLREYGFHGGSAKKRWDINAIVQRISLWKNDFLSAAEVKRKVSSNDYDEIAAELYEAYDD 181 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +L+ R + + P + +R RF +LVDE+QDTN Q+ + L G+ Sbjct: 182 RLRALAAVDFDDLVCRIALMLQDNPLTKKRWRRRFRYLLVDEYQDTNTAQFQMLLELLGE 241 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQ+IYGWRGA+V NI F F A+ I+LE NYRS I + ANA+I + Sbjct: 242 DQNLCVVGDDDQAIYGWRGAKVANILGFDLYFRNAKVIKLEANYRSRPPITTCANAVIAH 301 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 N R K+L GE + L + EA++V ++I + + G CA+LYRS+ Sbjct: 302 NTSRHDKELVPQRTGGEKVQLVVTRDGPSEAKWVADKIYQLIHERGARPKHCAVLYRSSR 361 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q+R +E+ L + +P+R+ GG F++++ +KDA +YL+L+ +DD A R ++TP +GI Sbjct: 362 QARAVEQNLQEHGLPFRMLGGQPFYDKKTVKDATAYLKLLVMPSDDIAVRRALDTPAKGI 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELID----ALAQETAD 474 G +T++ + + Q L A + + + GR +L+RF + A ++ + Sbjct: 422 GRKTVERMSHWAEVHQKRLVDAIYHAKEIEGITGRPLESLERFHNQLRHAQIAASRGSVK 481 Query: 475 MPLHVQTDRV-IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 L D V ++DS L+ E GE + R ++++ L+ + +F ++ P + Sbjct: 482 DALRGFLDNVRLRDSVLK---ETGSGEATKVRWDSVQFLLDSVGRFEERAWNQKGKPRWS 538 Query: 534 -FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ------MSL 586 +L + L+ + + + DA+ L T HS+KGLE+ QVFI+G+EEG P + +S Sbjct: 539 DYLGNLDLKKKD-EDEAVPDAITLSTFHSSKGLEWSQVFIIGVEEGTLPHKRTDAPRLSD 597 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 G LEEERRL YVG+TRA +L +T A TR G+E+ +PSRF+ ELPE Sbjct: 598 AIAGDLEEERRLFYVGITRARDRLWMTRAATRVDRGRELEIKPSRFLDELPE 649 >UniRef50_Q5HY14 DNA helicase II UvrD n=2 Tax=Gluconobacter oxydans RepID=Q5HY14_GLUOX Length = 682 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 242/647 (37%), Positives = 350/647 (54%), Gaps = 64/647 (9%) Query: 25 LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGG 84 ++VLAGAG+GKT+ LV I + SP I+AVTFTNKAA EM+ RI + +Q Sbjct: 31 VVVLAGAGTGKTKTLVAGIVDRVVKRRMSPDRILAVTFTNKAAGEMKTRIAAALNIAQAP 90 Query: 85 MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK------AMNLDEKQ-- 136 WVGTFH R LR A L F + DSED ++++RL++ MN D+ + Sbjct: 91 YWVGTFHAHGRRQLRTDPDIAGLRPGFDVCDSEDSTKIVRRLLEKAIEAGVMNADDGETF 150 Query: 137 -------------------WPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK---VY 174 PP W EG + G+ + W+ +Y Sbjct: 151 RKRVKSVSSRIAMLKENMVLPPDAVAWV------EGRIATDAITEGDDI-MVWRDAAVLY 203 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 AYQ + DFA+LLL L + + +RF +L DEFQD N +Q+ W++ Sbjct: 204 PAYQAMLRESNRADFADLLLWPTVTMLRDERYRRDWADRFDCVLADEFQDVNRLQFLWLK 263 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 L+ D ++ +VGDD QSIYGWRGA V I+ FL +FP I LEQN+RST +ILSAAN Sbjct: 264 CLSKDHNELFVVGDDAQSIYGWRGANVRIIRSFLKEFPTGRMIALEQNFRSTGHILSAAN 323 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILY 354 A+I ++ RL K L+T DGEP+ + DEA + I G + A+LY Sbjct: 324 AVISHDTSRLEKTLYTASGDGEPVDILRHTGSQDEASGIAAEIGRRALEGVPYEDMAVLY 383 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA---NRNDDAAFERVV 411 R N SR+LEE+LL+A +PY + F++R +KDAL++LRL R D AF R+V Sbjct: 384 RFNHLSRLLEESLLRARIPYELVNDTAFWQRGVVKDALAFLRLTCFPYERQSDEAFRRIV 443 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 N P RGIG + + Q + + ++L++A +Q + G+AA L+ F+++I L Sbjct: 444 NQPARGIGAKAMATFEQVADEEAISLYEAAERTVQGR--TGKAADKLRGFLDVI--LKGA 499 Query: 472 TADMPLHVQTDRV-IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 +D P + RV +++SG M+ GE G+T +ENL EL++ +FS EE Sbjct: 500 RSDEPSLGERLRVLVEESGYLAMH-HAAGEDGRTALENLHELLSLANEFSSVEE------ 552 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 HAAL E + D V+LMT+H +KGLEF VF++G E+ +FPS+ ++D Sbjct: 553 ---LFDHAAL-GSESRDDDSVGRVKLMTIHGSKGLEFGHVFLIGWEDTLFPSRTNIDPA- 607 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 EERRLAYV +TR Q++++++ E RR G++ PS FI E+P Sbjct: 608 ---EERRLAYVALTRGRQRVSVSWCEFRR--GEQA--NPSCFIDEIP 647 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 212/497 (42%), Positives = 294/497 (59%), Gaps = 16/497 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN +QR V +L+LAGAGSGKTRV+ HRIA+L+ +P SI+AVTFTNK Sbjct: 4 LLDKLNPQQRAGVENVDGPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWV-GTFHGLAHRLLRAHHMDA------NLPQDFQILDSED 118 AA EM R+ L+G S V TFH R+LR ++A L + F I D D Sbjct: 64 AAKEMAERVDALIGHSTLAKPVLATFHSFCVRMLR-RDIEALRIGNEGLTKTFAIYDESD 122 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP--HHIQSYGNPVEQTWQKVYQA 176 Q L+K++++ M LD+KQ PR + I+ K+ + P +++QS +PV + +++A Sbjct: 123 QQSLVKQIMRRMGLDDKQLTPRVVLSKISWAKNHMIDPQEYYLQS-SDPVAERVAHIFEA 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y++ + +DF +LLL A L + + + Y R+ +L+DE+QDTN QY ++LL Sbjct: 182 YRKDLRKNNALDFDDLLLEAVRLLKSSAEVRERYNRRYQYLLIDEYQDTNRPQYELMKLL 241 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 AG V +VGD+DQSIY WRGA + NI F DFP A+TIRLEQNYRST IL AA A+ Sbjct: 242 AGSRHNVCVVGDEDQSIYSWRGADIRNILEFEKDFPNAQTIRLEQNYRSTQVILEAAGAV 301 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE---CAIL 353 + N R GK LWT G I Y A + +EA F+ + I+ + G AE A+L Sbjct: 302 VSRNEQRKGKSLWTSREGGSLIGFYEAPDGENEALFIADSIQKYLRKAGESAEQPRAAVL 361 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+N+QSR++EEAL + + Y + GG F+ER EIKD LSYL+L+ N ND A +R+VNT Sbjct: 362 YRTNSQSRLVEEALRRYGIRYTMVGGFSFYERAEIKDLLSYLKLVQNPNDSIALQRIVNT 421 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI-DALAQET 472 P RGIG T++ + + + + + W L+EK L RA AL F+ LI DA A Sbjct: 422 PARGIGKTTMETLERIALETGTSTWNGIVRALREKLLPSRALVALDTFVRLIEDARALLA 481 Query: 473 ADMPLHVQTDRVIKDSG 489 D + D V +SG Sbjct: 482 PDFAEKLAAD-VAAESG 497 Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 75/164 (45%), Positives = 96/164 (58%), Gaps = 10/164 (6%) Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I SG E+E + +RIENL+EL A + E L FL HAAL + Sbjct: 625 LIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQERGET-----LNEFLDHAALVSD 679 Query: 544 EGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 Q D DA V LMTLH+AKGLEFP V + GMEEG+FP +L + ++EEERRL YVG Sbjct: 680 TDQFDA--DARVTLMTLHAAKGLEFPMVVLAGMEEGLFPHSRTLTDPNQMEEERRLCYVG 737 Query: 603 VTRAMQKLTLTYAETRRLYGKEV--YHRPSRFIGELPEECVEEV 644 +TRAM L LT A RR YG ++ PSRF+ E+P +E + Sbjct: 738 LTRAMDSLILTRARYRRRYGNDMPEASTPSRFLEEIPAHLLENL 781 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 39/61 (63%) Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 R+ P ++G + GQRVRH K+GEG + +G GE++++ V F G+K LV +A+L Sbjct: 881 RLDVPAPSGNTGLRNGQRVRHPKYGEGIVFQRDGEGENAKITVQFAKFGVKKLVEKFAQL 940 Query: 718 E 718 E Sbjct: 941 E 941 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 367 bits (941), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 229/711 (32%), Positives = 378/711 (53%), Gaps = 52/711 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LND Q+EA+ +L+LAGAGSGKT+ + R+A+L+ + + +TFTNK Sbjct: 3 FFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLTLTFTNK 62 Query: 66 AAAEMRHR-IGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA M+ R + L + + TFH LR + N +F I+D++D+ ++LK Sbjct: 63 AANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKILK 122 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS----YGNPVEQTWQKV---YQAY 177 L + NL Q YI++ K++ I+ + + ++++ Y+ Y Sbjct: 123 DL-ASENL---QSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQY 178 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + + +DF +LL+ +++ L + +++T I VDE+QDTN +QY ++ L Sbjct: 179 EHFLIQNNFMDFDDLLMLTNKI-LEDEAFAKEQSQKYTYITVDEYQDTNALQYQILKKLC 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + +VGDDDQSIYGWRGA++ENI F F + ++LEQNYRSTS IL AAN LI Sbjct: 238 ASHENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 E+N RLGK L +GE I++ +E E+ V + ++G +E AILYR N Sbjct: 298 EHNRKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVN 357 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 A SR LEEA + +P+++ G+RF+ER EIKD +SYLRL++N NDD +F+R++N P R Sbjct: 358 ALSRALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRN 417 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 G+ +L+ + +++ L+L+++ L + + L++F+ + + ++ + + Sbjct: 418 FGNASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLAM 477 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR----QFSYNEEDEDLMPLQA 533 + + K ++ Y+ +G+ ++ N++EL + +YN D+ L + Sbjct: 478 ILALEEEFK---IKEFYKD--NPEGEDKLLNIDELYANLKDKISHGNYNGLDDILNEISL 532 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 L+ ++++ +M++H++KGLEF VFI+G+EEG FP E +E Sbjct: 533 LNEQDGLD---------KESICIMSIHASKGLEFDYVFIIGLEEGFFPLT---SESSNIE 580 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRLAYV +TRA +KL L+YA +R G SRF GE +E+ L Sbjct: 581 EERRLAYVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGE-SNVIKKELTL------- 632 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 HQ+ + YK G ++H FG G + + G +L + F G Sbjct: 633 -DHQK---------NCYKKGDLIKHKIFGIGRVTGVSKIGAEEKLTINFGG 673 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 223/726 (30%), Positives = 382/726 (52%), Gaps = 63/726 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ P I+A+TF+NKA Sbjct: 4 LKDLNEQQKSAVIYNEGPLRIIAGAGSGKTRVLTYKIAYLIQKLGVLPNRILALTFSNKA 63 Query: 67 AAEMRHRIGQLMGT---SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 A EM+ R+ L+ S ++ TFH + ++LR + DFQILD DQ +L Sbjct: 64 ANEMKQRVFNLLAEDNPSNLSPYISTFHAMCAKILRKEIYNFGYENDFQILDELDQKEIL 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDE--------GLRPHHI-------QSYGNPVEQ 168 K + +++ ++ + +I ++K+ H ++ ++ Sbjct: 124 KIVYSELDISPTEFTFSSIISFIQNKKNSIEYLNNSINDNNEHFNEDSDSQETQDEKIKA 183 Query: 169 TWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNK--PHILQHYRERFTNILVDEFQDTN 226 +K+Y+ YQ +R+ +DF +LL+ ++L+ + + +++RF IL+DEFQDT+ Sbjct: 184 IKEKIYERYQLHLERSHSLDFDDLLVFVYKLFYEPKFSFVAERWKKRFDYILIDEFQDTS 243 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST 286 +QY ++ LA + + IVGD DQ+IY WR A + I F D+P + T++LE+NYRST Sbjct: 244 ILQYRIMQKLANE--HLTIVGDPDQTIYSWRNADINIIMNFDKDYPNSVTVKLEENYRST 301 Query: 287 SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA 346 IL AAN LI +N RL KKL+T+ +GE I YC FN+ EAR++ +I + N Sbjct: 302 KTILRAANNLISHNKLRLEKKLFTENEEGENIEFYCGFNDEAEARWIATKISELKRNRVQ 361 Query: 347 LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAA 406 L AILYR+N+ SR +EEAL++ + Y+++G ++F++R+E+KDAL+YLR+I + + + Sbjct: 362 LKNIAILYRTNSCSRAIEEALIKENTIYKLFGSIKFYQREEVKDALAYLRVIHD-GSEIS 420 Query: 407 FERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC----RELLQEKALAGRAASALQRFM 462 R++N P+R IG+ T++ + S+ L L++ ++ +E ++G L F+ Sbjct: 421 LLRIINKPSRKIGNVTIEKLLSASKKYNLGLFEYLETHFNQIQKELHISGDTLKNLANFI 480 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 I + +H+ +I + + E+ + +I+N L+ A ++ Sbjct: 481 NEIRWARRAIQTNAIHLTIKELIVNKIKYFDEIKNSEEEYENKIDNFNSLIEAIAEW--- 537 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS 582 E+ + +L L D V LMT+H++KGLEF VF+ + E +FP Sbjct: 538 EKKNPQGSIDEYLQEITLITDRDVEDDAASFVSLMTVHNSKGLEFDYVFVACLAENIFPL 597 Query: 583 QMSLD-------------------EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 + ++ EG LEEERRLAYV +TRA ++L L+++ G+ Sbjct: 598 KRAISISPQDDFTFLNSKNFKENIEG--LEEERRLAYVAMTRAKKRLMLSFS-----VGR 650 Query: 624 EVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGE 683 +R SRF+ E + +++ S + ++ +G + H +G+ Sbjct: 651 NGINRKSRFLSEAGINEIRTIKIANNFSIAAEQETRNNDLI-------VGDYIIHNTYGK 703 Query: 684 GTIVNM 689 G I++M Sbjct: 704 GLIIDM 709 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 228/724 (31%), Positives = 395/724 (54%), Gaps = 41/724 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN KQ +AV + + ++AGAG+GKT+ L RIA+L+ N + I+A+TFTNKA Sbjct: 7 LKQLNSKQYQAVTSKDKAVYLVAGAGTGKTKTLTIRIAYLIKYLNINNEKILAITFTNKA 66 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA--HHMDANLPQDFQILDSEDQLRLLK 124 A+EM+ R+ M + TFH L +R+L+ H ++ N ++ ILD +D L+++K Sbjct: 67 ASEMKERLVA-MKVDIYKSTICTFHSLGNRILKKFIHVLNNNFDSNYSILDIKDSLKIIK 125 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 ++ K +N+D++++ P++ YI++ K++ + I +Y N + K+Y YQ+ + Sbjct: 126 KISKDLNIDKEKYKPKELNKYISNIKNKKEKKIFIDNYDNNI----LKIYNNYQQFLENN 181 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 L+DF +L++ ++L +I +++ +FT+IL+DEFQDT+ +QY ++LL + Sbjct: 182 NLLDFDDLIIYTYKLLKKHENIKNYFQNKFTHILIDEFQDTDFLQYQILKLLNTKNNYIF 241 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR- 303 VGD DQSIY +RGA++ N + FL DF A+T+ L++NYRST+NIL AN LI+NN+ Sbjct: 242 AVGDPDQSIYSFRGAEITNNKLFLKDFK-AKTLILDENYRSTNNILDKANLLIQNNSFYG 300 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRV 362 KKL + G + N+ E FV +IK + + AILYR N + Sbjct: 301 FTKKLQSFFGKGHKVFPKMFENDDQEVDFVAEKIKNLIKKEKCNYEDIAILYRLNGLEKK 360 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 E+ L+ ++PY ++G + FF R+EIKD L+Y++++ + D +R++N P+R IG +T Sbjct: 361 FEKIFLKKNIPYIVFGNINFFNRKEIKDILAYIKILIDPKQDFYLKRIINVPSRKIGKKT 420 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + S+++ ++L++ L +E+ + L F LI + ++ ++ + Sbjct: 421 ISNLEIISKEKNISLFETLILLCKEEK---KCNKNLLNFKNLILEMIKKINSNSF-LKLE 476 Query: 483 RVIKDSGLRTMYEQEKGEK-------GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 +I + Y + +K T IE+L+ T + ++ L L Sbjct: 477 NIIDYIDQKVNYSKSINKKKINPENDNLTYIEDLKSFFTKKKDQD--KKKTVKQELIDIL 534 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +L E + D ++ V L T+H KGLEF VF+V EE + P + + LEEE Sbjct: 535 DQISLN-NEVKKDN-KNKVTLSTIHKIKGLEFKIVFVVYFEENILPLKNN-KYNAPLEEE 591 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 RR+AYV +TRA ++L L A R ++G K + + S F E +++ + + Sbjct: 592 RRIAYVAITRAKERLFLLGAYERNIFGHKTINIKESDFF--------ENMKIFLPRKKSI 643 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAA 713 S + N + +K+G +++H FG G I+ + E++ L +AF+ Q GIK + Sbjct: 644 SESKY--QFNNNYNFFKIGDKIKHDIFGIGRII---TNIENNLLIIAFEPQFGIKKIAYD 698 Query: 714 YARL 717 YA++ Sbjct: 699 YAKI 702 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 227/704 (32%), Positives = 382/704 (54%), Gaps = 34/704 (4%) Query: 27 VLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMW 86 ++AGAGSGKTRV+ +IA+L+ +N P I+AVTFTNKAA EM+ R+ Q+ S + Sbjct: 27 IIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVLQITNNSFKSPF 86 Query: 87 VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNL----DEKQWPPRQA 142 + TFH ++LR L F I+DS+DQ R++K +K N+ ++K+ ++ Sbjct: 87 ISTFHSWCSKVLRIDGKHIGLEDKFLIIDSDDQKRIIKSALKESNIELSENDKKTFDKKI 146 Query: 143 MWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWL 201 ++ I K+E + P I + + +E+ + +Y+ YQ + +DF +L + + L+ Sbjct: 147 LYKIKEWKEELVDPSEAILNATSTLEKNFAVIYRLYQNTLLKNNSLDFDDLQIYVYRLFK 206 Query: 202 NKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQV 261 IL +R + +LVDEFQDTN +Q++ I+ L +T + +VGD DQ+IY WRGA++ Sbjct: 207 QNNEILNKWRNAYDYVLVDEFQDTNELQFSLIKFLTINTNHLTVVGDPDQTIYSWRGAKL 266 Query: 262 ENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLY 321 + I F + A +I L QNYRST IL +N+ I+NN R K+++T+ G+ + L Sbjct: 267 DIILNFNKTYSNAISIVLNQNYRSTKQILDISNSFIKNNKFREHKEIFTNNKSGKKVVLK 326 Query: 322 CAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMR 381 ++ EA +V ++IK G + ILYR NA S+ E+ L +P+++ GG++ Sbjct: 327 ECNSKTSEASYVSSKIKELVKQGYHYKDIFILYRMNAWSQEFEKELANKKIPFQLIGGIK 386 Query: 382 FFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC 441 F ER+ IKDA+++L++I+ + D+ + +RV+ + IG+ T++ + T+ L ++ Sbjct: 387 FRERKVIKDAMAFLKMISIK-DNLSSQRVLGLIPK-IGNITIEKIINTANLNHLNIFDLI 444 Query: 442 RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE-KGE 500 ++K L L +E+ Q D + + ++K +++ YE + K Sbjct: 445 TN--EDKTLLHSITKNLDELIEVFKTAHQLYLD---NTNIEEILKYLLIQSGYENKLKIR 499 Query: 501 KGQTRIENLEELVTATRQFSYNEEDEDLMP--------LQAFLSHAALEAGEGQADTWQD 552 K Q +EN+ L ++F DED P L AFL AL + +A+ D Sbjct: 500 KEQDDLENINALYDQLKRF-----DEDFDPKYYSEENKLIAFLQEEALTSDIDEAEQI-D 553 Query: 553 AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTL 612 V L+T+H+AKGLE VFI G+ +G+FPS++S LEEERR YV +TRA +L L Sbjct: 554 KVSLLTVHAAKGLENKVVFITGLNQGIFPSRISETSINELEEERRALYVALTRAKDELFL 613 Query: 613 TYAETRRLYGKEVYHRPSRFIGELPEECVE-EVRLRATVSRPVSHQRMGTPMV--ENDSG 669 TY + + + +PS+FI EL ++ E E + T+ + + + V + + Sbjct: 614 TYVKGDYSHIMQSELKPSKFIHELDKDLYEFETQFLNTLLYDSNDYKQSSFYVSPKQHNL 673 Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 Y +G V H FG+G +V + + +LQ++F ++ A Sbjct: 674 YNVGDHVEHKLFGKGVVVKI----INDQLQISFTNSSYGIMMIA 713 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 197/472 (41%), Positives = 285/472 (60%), Gaps = 13/472 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN +QREAV +L+LAGAGSGKTRV+ +RIA+L+ SP SI+A+TFTNK Sbjct: 3 FLEKLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTNK 62 Query: 66 AAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLR----AHHMDAN-LPQDFQILDSEDQ 119 AAAEM+ R+ L+G + + TFH R+LR A ++ +DF I D DQ Sbjct: 63 AAAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDESDQ 122 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH--HIQSYGNPVEQTWQKVYQAY 177 L+K +K + +D+KQ R + I+ K+ L P ++QS G+P + ++Y+ Y Sbjct: 123 QSLVKSAMKRLGIDDKQLTVRNVLSRISHAKNHLLDPQEVYLQS-GDPKVERIAQIYKVY 181 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + +A +DF +LLL ++L + + Y RF +L+DE+QDTN QY +R LA Sbjct: 182 ESELAKANALDFDDLLLMTNKLLKTSTEVRERYNRRFQYVLIDEYQDTNRPQYEIMRALA 241 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V VGD+DQSIY WRGA + NI F DFP A+ +RLEQNYRST NIL AA+A++ Sbjct: 242 GTLHNVCAVGDEDQSIYSWRGADIRNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVV 301 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW----QDNGGALAECAIL 353 +NN R GK LWT+ G + Y A + +E+ FV + I + D A+L Sbjct: 302 KNNLKRKGKNLWTERMGGAKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVL 361 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+N+QSR+ EEA+ + + Y + GG F+ER EIKD +SYL+LI N +D A R +NT Sbjct: 362 YRTNSQSRLFEEAMRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINT 421 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 PTRGIG T++ + + + + L LW A +++++ + RA +AL+ F ELI Sbjct: 422 PTRGIGKTTVEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELI 473 Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 135/289 (46%), Gaps = 60/289 (20%) Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I +G E E + RIENL ELV A E + FL HAAL A Sbjct: 565 LIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDSRDRGET-----IADFLDHAALVAD 619 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + V LMT+H+AKGLEFP VFIVGMEEG+FPS +L +EEERRL YVG+ Sbjct: 620 TDDIEAGAQ-VTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRTLMNPDEVEEERRLCYVGM 678 Query: 604 TRAMQKLTLTYAETRRLYGKEV--YHRPSRFIGELPEECVEEV----------------- 644 TRAM+ L L+ A RR YG ++ SRF+ E+P + E++ Sbjct: 679 TRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFEDIGSPQKKTPVFGDDSYST 738 Query: 645 --------------RLRATVS-------------------RPVSHQRMGTPMVE--NDSG 669 R + S R R PM E G Sbjct: 739 HYDYENEDQRPQYGRTKQKTSYGGGSTYNSIDNIAEFFASRGKKFNRPSVPMEEPHGKRG 798 Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 ++ GQ+V+H K+GEGT+ EG GE +++ V F G+K LV +A+LE Sbjct: 799 FRPGQKVKHPKYGEGTVYQREGEGEEAKITVQFPRFGLKKLVEKFAQLE 847 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 233/673 (34%), Positives = 343/673 (50%), Gaps = 52/673 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN+ QR+AV S LL+LAGAGSGKTRV+ +IA L+ P I+AVTFTNKA Sbjct: 5 LSALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R L +QG + TFH L +LR + + L F I D D LL ++ Sbjct: 65 AREMRTRACALESAAQGAT-ICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRALLPKI 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV------------EQTWQKVY 174 + + R I+ KD GL +S V ++ + Y Sbjct: 124 LPHCDHSRAGMLARG----ISQAKDYGLDCASFESVHARVSAPACAARAVLGDRQFAHAY 179 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 Y G VDF +L++ +L + + R+ ++VDE+QD+N Q+ +++ Sbjct: 180 ACYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQLHARWQVVMVDEYQDSNVAQFHFLQ 239 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +L G + +VGDDDQSIY +RGA+V+NI F F + IRLE NYRST IL A+ Sbjct: 240 VLTGAHTYLCVVGDDDQSIYRFRGAEVKNILTFPEFFQNTQIIRLEYNYRSTDAILRVAD 299 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILY 354 ++++ N RLGK L G L+ N+ +EA V+ I+ + G A+ AILY Sbjct: 300 SVVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDEEAALCVHLIQEARARGIPYADWAILY 359 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R NAQS E+ L+ +PYRI G ++F+ R E+KD L++L+LI N +D+ A RV+N P Sbjct: 360 RVNAQSLSFEQCFLRNRIPYRIVGTLKFYSRAEVKDVLAFLQLIVNGSDELALRRVLNKP 419 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG++T D + ++ +T + + AL RA + F+ L+ AL Sbjct: 420 PRGIGEKTQDALFVCAQQAAITDFTTLQS-THLTALGTRARQKVSSFLSLLRALRARMPQ 478 Query: 475 MPLHVQTDR-------------------------VIKDSGLRTMYEQEKGEKGQTRIENL 509 P + R V++ +GL Y Q+ E+G N+ Sbjct: 479 APAAGEEARTSAPPEEPVEERTHDAEGLARFVSVVMEHTGLEEWYRQKDEEEGTQCAVNV 538 Query: 510 EELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQ 569 +EL+ A ++ + E L +FL H L+ DAV L+T+H+ KGLEF + Sbjct: 539 QELMNAASLYACSHEG-----LVSFLEHIQLDQNMADEGGAADAVHLITIHNTKGLEFRR 593 Query: 570 VFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRP 629 V + G+E G+FP D+ ++EERRL YV TRAM L LT RR++G+ +P Sbjct: 594 VILTGLENGVFPR----DDEADIQEERRLMYVACTRAMDSLYLTACAYRRMWGRHTAMKP 649 Query: 630 SRFIGELPEECVE 642 SRF+ EL +E Sbjct: 650 SRFLTELDSALLE 662 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 361 bits (926), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 239/669 (35%), Positives = 349/669 (52%), Gaps = 50/669 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q EAV LVLAGAGSGKTRV+ +IA L+ + P I AVTFTNKAAAE Sbjct: 158 LNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEAKGFEPRHIAAVTFTNKAAAE 217 Query: 70 MRHRIGQLMG----TSQGG---------MWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 MR R+G+L+ T+ G + V TFH L ++LR L F I+DS Sbjct: 218 MRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGVQILRQEAEHVGLKPQFSIMDS 277 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQ 175 +D +++ I + + R+ I+ K+ + P + N E VY+ Sbjct: 278 DDCFGMIQEQIGTTD----KGLIRKIQTIISLWKNGLVTPEEAMTIAANEDEHQAALVYR 333 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y VDF +L+ EL+ + ++ R +L+DE+QDTN QY ++L Sbjct: 334 NYVATLHAYQAVDFDDLIRLPTELFAKNEPVRDRWQNRLRYLLIDEYQDTNACQYELLKL 393 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LAG VGDDDQ+IYGWRGA +EN+ + DFP I+LEQNYRST IL+AAN Sbjct: 394 LAGPRAAFTAVGDDDQAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILTAANN 453 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILY 354 +I NN KKLW++ G+ I++ +E EA VV R+ + + + AILY Sbjct: 454 VIANNPKLFEKKLWSEHGMGDSITVTPCNDEEHEAESVVFRLSAHKFERRTQFRDYAILY 513 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R N Q+R+ E+ L + +PY + GG FF++ EIKD +YLRLIAN +DD AF R V TP Sbjct: 514 RGNFQARIFEQVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRAVTTP 573 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG+ TL+ + + +++L++A E L+ R L+ F + I L Sbjct: 574 RRGIGNTTLEALGAFAGQAKVSLFEAVYMGGIEARLSARQIEPLRIFCDFIQRLTDRADK 633 Query: 475 MPLHVQTDRVIKDSGLRT-MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 P V D +++ +Y+ + QT+ +N+ E + ++ E ++ + +A Sbjct: 634 EPATVVLDDMMEAIHYEAYLYDAYDERQAQTKWQNVLEFLEWLKRKGTKPEPDEAVDGEA 693 Query: 534 FLSHAALEAGEGQADTWQ----------------------DAVQLMTLHSAKGLEFPQVF 571 H A +G ADT + DAV+L T+H++KGLE+P VF Sbjct: 694 EGFHNA----DGLADTGKNLLGLIQTVALMSMLEGKEEDPDAVRLSTVHASKGLEYPHVF 749 Query: 572 IVGMEEGMFPSQMSLDEGG----RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 +VG+EEG+ P D+G R+EEERRL YV +TRA + L L + + R+ + + Sbjct: 750 LVGVEEGIMPHSGGSDDGPIDDERIEEERRLMYVAITRAQRSLHLNWCKKRKRARETIVC 809 Query: 628 RPSRFIGEL 636 SRFI E+ Sbjct: 810 EQSRFIAEM 818 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 265/779 (34%), Positives = 392/779 (50%), Gaps = 74/779 (9%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 V + LN +QR AV LLVLA AGSGKTRV++ R+ +L+ S TF Sbjct: 14 VPLVDPGLNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATF 73 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 T KAA E+ RI + ++ +VGTFH L+ RLLR A LP DF + D+ DQ L Sbjct: 74 TRKAARELVERISHRLPDARL-PYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKAL 132 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS---YGNPVEQTWQKVYQAYQE 179 ++ +++ + E+ P++ + I+ K+ P + +G+ + Y+ Y+E Sbjct: 133 VREIMRRHKVSEEDVAPQEILRQISQWKNARQTPGPELARRLFGS--RRFMATCYEEYEE 190 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + +D+ +LL R L ++P + R+ F +ILVDE+QDTN +Q IRLL+ + Sbjct: 191 GLRKNRSLDYDDLLCRLVGLLSSQPDVATALRQEFHHILVDEYQDTNPLQEELIRLLSRE 250 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGDDDQSIY +RGA+V +IQRF + +PGA + L +NYRSTS I+ +A ++I Sbjct: 251 RRNVTVVGDDDQSIYRFRGAEVAHIQRFSDHYPGAGRVLLSRNYRSTSAIVDSATSVIRK 310 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N+GR K + G P+ L +E EAR V ++ W GG + A+L+R+NAQ Sbjct: 311 NDGRYMKTVTAVRGGGSPVLLMEFPDEEAEARGVAGILREWIAGGGRPSRAAVLFRTNAQ 370 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 S LE+A+ A +P+ GG E +E +D ++YLRL+ N D + R+ N P RG G Sbjct: 371 SLPLEKAMAAAGVPFFRPGGGGLLESREARDLVAYLRLLVNPFDRLSLARIFNVPPRGQG 430 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI--DALAQETADMPL 477 D + V + S + ELL+ A G L + L+ + A D+PL Sbjct: 431 D---EAVEELSALSEAHPELPVAELLERLAERGGRREPLGKLSALLREGSEAASRGDVPL 487 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKG-QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + DRV+ +G R +EK E+ + R+E LEE F E+ E PL AFL Sbjct: 488 SL-LDRVVAATGYREWLTREKDEETRRRRLETLEEFRGLAGDFVREEDREASGPLAAFLE 546 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR----L 592 L + EG ++ V LMT+H +KGLEF V + G+E+ + P + GGR + Sbjct: 547 DLTL-SREGPDAEGRERVGLMTIHQSKGLEFDCVVVAGLEDQLLPFRSF--AGGRSSTDI 603 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV---EEVRLRA- 648 EEERRL YV +TRA ++L LT+A TRR+YGK PS F+ ++P E V +RA Sbjct: 604 EEERRLFYVAMTRARERLHLTWARTRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAP 663 Query: 649 ------------------------------------TVSRPV------SHQRMGTPMVEN 666 +V RPV +R G P Sbjct: 664 SAPSSSGRLPGQSRDGGSGFSPSFGHPSRRDRLASPSVGRPVFRGASKVERRQGEPSPAE 723 Query: 667 D----SGYK----LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 SG + +G++VRH +FGEG +++ L V F + L+A A L Sbjct: 724 GPASISGGERKDWIGKKVRHPRFGEGVVLDARSPDPDLELVVRFSEGPPRTLLARLANL 782 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 227/672 (33%), Positives = 356/672 (52%), Gaps = 52/672 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L SLN +Q + V + + V+AGAG+GKT+VL RIA+L+ Y I+A+TFTNKA Sbjct: 7 LKSLNKQQYDVVTSDLIPIFVVAGAGTGKTKVLTSRIAYLIEHFKIPEYKILAITFTNKA 66 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQD-FQILDSEDQLRLLKR 125 A EM+HR+ +L+ + + TFHG ++LR + + D F ILD DQ +L++ Sbjct: 67 AKEMQHRLEKLLNKEKTQVSFRTFHGFCAQVLREEVNNVDRLNDRFNILDEVDQAKLIED 126 Query: 126 LIKAMNLDE-----KQWPPRQAMWYINSQK-------------------DEGLRPHHIQS 161 L+K+ + + + M IN K D L P+ +Q Sbjct: 127 LLKSQKYEYYYSQYTDFKKNKVMSIINDAKTYNLDVAEFLASDLNKLGEDHILTPNLVQP 186 Query: 162 YGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDE 221 N Y Y++A +DF +LL A+ L+LN P IL+ ++ R+ ILVDE Sbjct: 187 LSN--------FYHDYEKALKELNAIDFNDLLNIAYNLFLNDPIILKKWQNRYEAILVDE 238 Query: 222 FQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 FQD N IQY ++LL + VGD DQSIYGWRGA E DF L Q Sbjct: 239 FQDANEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGANSEIGDSIRFDFNDLVVKYLTQ 298 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWT-DGADGEPISLYCAFNELD-EARFVVNRIKT 339 NYRS +IL+ AN I+ NN R K L + D D P ++ F+ ++ + RFV+++IK Sbjct: 299 NYRSKQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPIWINFSNIEYQNRFVMDKIKE 358 Query: 340 W-QDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLI 398 + AILYR+N S LE + + +PY I+GG +FF R+EIKD + YL+L+ Sbjct: 359 LVASKQYTYGDFAILYRTNFSSVSLERLIKENRIPYEIFGGYKFFLRKEIKDLIGYLKLV 418 Query: 399 ANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASAL 458 + N+D AF+R++NTP R IGD +++++++ + + +T ++A + L E + + Sbjct: 419 -DTNNDIAFDRIINTPRRMIGDTSIEIIKELANKKSITEYEAL-DYLDESNIKANVKKSA 476 Query: 459 QRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 Q F ++I+ L + ++ + +IK R Y E T+ +++ E + + Sbjct: 477 QNFKKMIEDLRANQGNWSVYQTINEIIK----RINYYDYLNE--PTKHDSVNEFIDFLNK 530 Query: 519 FSYNEEDE--DLMPLQAFLSHAALEA--GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVG 574 + E++ + + F+ + ALE Q + ++A++LMT+HSAKGLEF VF++ Sbjct: 531 YEKEYENDFGTKLTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVIN 590 Query: 575 MEEGMFPSQMSL---DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSR 631 M E + PS S+ + +L EERR+ YV TRA L L + KE Y +PSR Sbjct: 591 MNENILPSSRSIAATNNKAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKEPY-QPSR 649 Query: 632 FIGELPEECVEE 643 F+ EL + +++ Sbjct: 650 FLYELSDLVLDK 661 >UniRef50_C6V4L3 DNA helicase II, UvrD/Rep family, N-terminal n=4 Tax=Alphaproteobacteria RepID=C6V4L3_NEORI Length = 481 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 201/498 (40%), Positives = 296/498 (59%), Gaps = 22/498 (4%) Query: 146 INSQKDEGLRPHHIQSYGNPVEQTWQK----VYQAYQEACDRAGLVDFAELLLRAHELWL 201 I++ KD+ P ++ + N ++K VY AYQE +DF +LL+ L+ Sbjct: 2 ISAWKDKAFTPSRVR-FNNAANTWFEKQALSVYDAYQEKLKENNSMDFGDLLMHNVTLFN 60 Query: 202 NKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQV 261 L+ Y+E+F I+VDE+QDTN QY W+RLLA + VGDDDQSIYGWRGA+V Sbjct: 61 KDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICCVGDDDQSIYGWRGAEV 120 Query: 262 ENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLY 321 NI RF DF GA+ I+LEQNYRST+ IL+AA+ +I+NN RL KKLWT GE I ++ Sbjct: 121 GNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNVIKNNQSRLTKKLWTAYPGGEEIQIF 180 Query: 322 CAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMR 381 + EAR ++ IK + ++ AIL R+ Q+R EEA + ++PYR+ GG++ Sbjct: 181 TYMDSEQEARAIIRMIKE-RKLVCRYSDTAILVRAGFQTRAFEEAAIHENVPYRVVGGLK 239 Query: 382 FFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC 441 F+ER+EI+D ++YLRL+ N ND+ AFER++NTP RG+G +L+ + S + ++++A Sbjct: 240 FYERKEIRDVIAYLRLVVNPNDNLAFERIINTPKRGLGQASLNKIYNYSLEEGCSMFEAA 299 Query: 442 RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 R+L + + L ++AL F++ + +E+ + LH ++ +SG Y E+ Sbjct: 300 RKLEENEKL---KSTALLTFVKQVRKWQEESLNHSLHDLLKKITLESG----YISALREQ 352 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHS 561 +TRIEN++EL ++F FL H +L DAV +MTLH+ Sbjct: 353 DETRIENVDELFRVIQEFD---------DATDFLQHVSLLTESDAQINNTDAVNVMTLHA 403 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 +KGLEF QVF+ G E+G FP SL ++EEERRLAYVG+TRA + LT+T A R + Sbjct: 404 SKGLEFEQVFLPGWEDGTFPHARSLFSTEQIEEERRLAYVGITRAKRFLTITSAHRRLIR 463 Query: 622 GKEVYHRPSRFIGELPEE 639 SRF+ EL E+ Sbjct: 464 NSWQNTVKSRFMLELAEK 481 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 258/753 (34%), Positives = 401/753 (53%), Gaps = 51/753 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L+ LN Q+EAV+ LLVLA AGSGKTRV++ R+ +L+ S ++ VTFT K Sbjct: 2 ILEELNPAQQEAVSHEGGPLLVLAPAGSGKTRVVIARLLYLLDRYGWSEDRLLVVTFTRK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA E+ HRI +L +S+ WVGTFH +A R+LR +LP++F I+D DQL++++ Sbjct: 62 AARELLHRISRLRPSSRPS-WVGTFHSVAARMLRQQAERLDLPREFTIVDGPDQLQMIRD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPVEQTWQKVYQAYQEACDRA 184 L+ + +K+ P++ I K G+ P I++ P + ++Y AYQ+ Sbjct: 121 LLGRQGVSDKEVDPKKLAGRIGKWKSAGVDPVEAIRTTFGPF-RVQAELYAAYQDNLALQ 179 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LLL P + + Y+ +F +ILVDE+QDTN +Q +RLL+ D V Sbjct: 180 KALDFDDLLLTLVRCLEQDPEVRETYQRQFEHILVDEYQDTNPLQERLLRLLSRDRQNVT 239 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA+V +I F ++PGA + L NYRST I++AA+++I + R Sbjct: 240 VVGDDDQSIYRFRGAEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSALARY 299 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K + + G GEP+ L +E EARFV I+ + G + +L+R N Q++ Sbjct: 300 RKDMVSTGRPGEPVFLKKLDSEWAEARFVARTIQEKVERGAMFRDQVVLFRMNVQAQPFI 359 Query: 365 EALLQASMPYRIYGGMR-FFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 A +A +P++ G ++ FF R+EI+D L+YLR+ AN D + R++N P RG+G++ Sbjct: 360 RAFAEAGIPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPPRGMGEKAR 419 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET--ADMPLHVQT 481 + + Q + + L+ W+ L+G+A + + F ++ ++ D P Sbjct: 420 ERLDQQAGNPGLSSWELL--ERLSLELSGKARESARAFANDLEEASRRVRRGDGPFS--- 474 Query: 482 DRVIKDSGLRTMYEQ-----EKGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQAFL 535 +++ RT YEQ E GE+G R ENL+EL+ + +F E D P FL Sbjct: 475 --LLQFWLSRTGYEQWVSEGESGEEGPGREENLKELLRMSERFGDGIGELTDRTPTGVFL 532 Query: 536 SHAAL-EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 AL + G+A D V L+T+H AKGLEFP V++ G EE + P M + +EE Sbjct: 533 EELALSQEDPGEAGESPDRVSLLTIHQAKGLEFPHVYLAGAEEDILP--MKSRDKVDVEE 590 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRL YV +TRA L +T+ TR+L+G+ RPSRF+ ++P E V+ R PV Sbjct: 591 ERRLFYVAMTRARDSLAITWCLTRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPV 650 Query: 655 SHQ-----------------------------RMGTPMVENDSGYKLGQRVRHAKFGEGT 685 S Q + +P E +G+ V H +FG G Sbjct: 651 SRQTSELPPRKVFPPPSLAPSRPATSLRSVPEKRTSPPTEVLRPEWIGKTVVHPRFGRGR 710 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 + G G L + F+ G++ L+ +A L+ Sbjct: 711 VEEAHGEGGDLELSIRFESSGVRRLLERFANLQ 743 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 243/764 (31%), Positives = 375/764 (49%), Gaps = 100/764 (13%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 L+ +Q EAV + V+AGAGSGKTR L HR +L+ SP +I+ VTFTNKAAAE Sbjct: 21 LDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKEMGISPANILCVTFTNKAAAE 80 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ RI ++G G ++ TFHG + LR N P++F ILD +DQ LL++ Sbjct: 81 MKKRIRSILGGDDSG-YISTFHGFCVQFLREEIHVLNYPKEFMILDEDDQKSLLRKAYAD 139 Query: 130 MNLDEKQWPPRQAMWYINSQKD----------------------------EGLRPHHIQS 161 + K + ++ +K E + H+ Sbjct: 140 LGFSLKDLKISSVLDFVGGRKANDIGYVSLFAEHLADEVGASAAENAPAVENEKREHLVE 199 Query: 162 YGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDE 221 + W VY Y + +DF +L+L + N P L +R+R ++VDE Sbjct: 200 LADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILENFPEKLDKWRKRMMYVMVDE 259 Query: 222 FQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 +QD + QY LL+ + +VGD DQ+IYGWRGA + I F G +TI L+ Sbjct: 260 YQDIDGQQYCLADLLSSYHKNLFVVGDPDQTIYGWRGADINRILEFDQFHKGTKTILLQN 319 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ 341 NYRST +IL +A+I+NN R+ K L A G+ Y A N +EA+++V RI+ Sbjct: 320 NYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTREEAKWIVERIQNAV 379 Query: 342 DN-------GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSY 394 N G + A+LYR ++QSR +EEAL+ S+PY++Y G+ F++R+EIKD + Y Sbjct: 380 QNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYKVYSGVGFYQRKEIKDIICY 439 Query: 395 LRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGR- 453 LR++ DD +F R VNTP R G + + +++ + R++ L++A E++ E AGR Sbjct: 440 LRMLV-YADDLSFIRTVNTPKRQFGPKKMAILQAFADTRKVGLYEALLEIVYE---AGRL 495 Query: 454 -------------------------------AASALQRFMELIDALAQETADMPLHVQTD 482 + S + +++LI+ DM + Sbjct: 496 NDVAPDVTTQAELSSVGNDHRKIDFDCKEFLSRSNVVEYVKLIEKYRSRYKDMRVSELLS 555 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF-SYNEEDEDLMPLQAFLSHAALE 541 ++++++ M + E R++NL EL +F +Y EED L +L + L Sbjct: 556 KMLRETKYEEMLRLDGDE---DRLDNLAELKQGILEFENYYEED---ASLDEYLQNIVLF 609 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + +D VQLMT+H+AKGLEFP VF+ G+ EG FP + + +LEEERRLAYV Sbjct: 610 TNADEDSQEKDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVK-RVQNKMQLEEERRLAYV 668 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR---------LRATVSR 652 TRA L L+ AE + G+ PSRF+ E+ + ++ R RA ++ Sbjct: 669 AFTRAENVLCLSDAED-GVAGESGSRYPSRFLLEMNMDELDVARGFSDDLLLAARAFIAE 727 Query: 653 PVSHQRMGTPMVENDS----------GYKLGQRVRHAKFGEGTI 686 ++ + E++S + +G RV H FG GT+ Sbjct: 728 SDRNRDLMNDFDEDESLGAVKKAPTAEFAVGDRVVHKIFGIGTV 771 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 353 bits (907), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 178/444 (40%), Positives = 267/444 (60%), Gaps = 11/444 (2%) Query: 29 AGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVG 88 AGAG+GKT+VL R+ L++ P I+AVTFT EM+ + + G M +G Sbjct: 409 AGAGTGKTKVLTSRVIHLINKGFAFPSQILAVTFT--IGNEMKQEFEKFLNNISGSMNIG 466 Query: 89 TFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINS 148 TFH +A ++LR H DF I++ +DQ+RL+K+LIK LD+K + ++YIN Sbjct: 467 TFHSMAAKILRRHAELIGYNTDFTIINQDDQIRLIKQLIKDFGLDDKNTSAKVLLYYINR 526 Query: 149 QKDEGLRPHHIQS-----YGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNK 203 KD + P ++ S Y N ++Y YQ + +DF +LLL L+ Sbjct: 527 FKDRAIMPKNLSSQEVEHYANG---KLNEIYCEYQNRLENFNAMDFGDLLLNNIRLFNEN 583 Query: 204 PHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVEN 263 I ++Y+ +F ILVDE+QDTN QY W+R L+ + VGDDDQSIY WRGA++ N Sbjct: 584 LDICEYYQNKFKYILVDEYQDTNIAQYLWVRTLSQKHNNICCVGDDDQSIYAWRGAEITN 643 Query: 264 IQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCA 323 I RF D+P A+ IRLE+NYRST +ILS A+ LI NN R K LWTD DG + + Sbjct: 644 ILRFDKDYPDAKVIRLEKNYRSTQHILSLASNLISNNKNRHSKVLWTDQKDGNKVKIINY 703 Query: 324 FNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRF 382 +++ +EAR + + I + L++ AIL R+ Q+R EE+L +PYRI G +F Sbjct: 704 YDDKEEARAIADEIDMVERLKKTKLSDIAILVRAGYQTRNFEESLNFLGIPYRIVGSTKF 763 Query: 383 FERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR 442 ++R EIKD + Y+RL+ N+ D+ AFERVVNTP RGIG+ T+ + T+++ L++++ + Sbjct: 764 YDRLEIKDCIGYIRLLVNKEDNLAFERVVNTPKRGIGNSTIMNILNTAKNSNLSMFEVSK 823 Query: 443 ELLQEKALAGRAASALQRFMELID 466 ++ EK + G+AA +L F+ +I+ Sbjct: 824 IMINEKKIKGKAADSLNNFINIIE 847 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 234/654 (35%), Positives = 352/654 (53%), Gaps = 32/654 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LN++Q AV++ LV+AGAGSGKTR L +R+AWL+ P++I+ +TFTNKAA Sbjct: 25 ALNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLD-HGTDPWNILLLTFTNKAAR 83 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ L+ +W GTFH +A+R+LR H F I+DS+D+ ++K ++K Sbjct: 84 EMTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSDDRKSMIKSVVK 143 Query: 129 AMNLDEK--QWPPRQAMWYINSQKD-EGLRPHHIQSYGNPVEQT----WQKVYQAYQEAC 181 ++ LDEK ++P + + + S D EG Q P +V+ Y Sbjct: 144 SLKLDEKSTRFPKPEVLSSLFSLADNEGANIRETQENAYPYLSNHLDAILEVHDQYVARK 203 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +LLL L+ + H+ Y RF +ILVDE+QDTN +Q I +LA + G Sbjct: 204 QETNSMDFDDLLLNVVRLFQEQEHLRALYGSRFQHILVDEYQDTNYLQSRLIDMLAREHG 263 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 ++M+VGDD QSIY WRGA +ENI F +P A+T ++E NYRS IL +NA I N Sbjct: 264 QLMVVGDDAQSIYSWRGADMENILSFTTRYPAAKTFKIETNYRSVPEILELSNAAIAANE 323 Query: 302 GRLGKKLWTDGADGE-PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 ++ K+L + GE P +L ++ +A+FVV RI+ + G +E A+LYR++ S Sbjct: 324 VQIEKQLRSVRPTGEMPPALVPLNDDRMQAKFVVQRIRDLIEEGTDPSEIAVLYRAHFHS 383 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN-TPTRGIG 419 L+ L + +P+RI G+RFFE+ IKD ++++R + N D+ +F R+V P G G Sbjct: 384 MELQMELTRGEIPFRITSGIRFFEQAHIKDVVAFMRFVVNPRDELSFRRMVMLLPGIGPG 443 Query: 420 DRTLDVVRQTS--RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-----T 472 +R T+ RQ T ++ L+ + + ++ +A + +D LA Sbjct: 444 MAQKLWIRWTACPESRQETPPESFSALMLDFPVPAKSRTAWTQLCYTLDELAPAGKLAGP 503 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 A M L + + + Y Q E R ++L L + +F E ED + Sbjct: 504 ASMLLSI-------NEAVYDEYMQAAFENYDQRRQDLLHLAGFSERF---ESTEDFLSQL 553 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--G 590 + L + E+ AD +V L T+H AKGLE+ VF++G+ +GMFP Q +D+G Sbjct: 554 SLLGNTDDES--AAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFPHQRVIDDGDLA 611 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAE-TRRLYGKEVYHRPSRFIGELPEECVEE 643 LEEERRL YVG+TRA +L LTY R G PSRF+ E P VEE Sbjct: 612 GLEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSRFLDEFPAGLVEE 665 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 352 bits (904), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 230/649 (35%), Positives = 344/649 (53%), Gaps = 22/649 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D+S+L N Q+EAV R LLVLAGAG+GKTRV+ +R+A L++ P I++V Sbjct: 2 LDISHL----NRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAA-GVDPERILSV 56 Query: 61 TFTNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EM R L+G T + + TFH +LR P+ F I D DQ Sbjct: 57 TFTNKAAREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQ 116 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQ 178 ++ ++ + + + P + I+ K +G+ P Q + EQ Y+ YQ Sbjct: 117 ESAARKALQVLKMTDTALKPGDLLAQISRWKMQGVMPDLAQEIADSDHEQLAGMAYRRYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 A AG VDF +LL +L+ + P L+ + RF + +DE+QDTN +Q+ I + Sbjct: 177 LALKAAGGVDFDDLLFLTFQLFKHHPEALERQQNRFDFVQIDEYQDTNELQFRLIESIVR 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYGWRGA+V++I F FP A+ +RLE NYR T +I+ AN L+ Sbjct: 237 RHQNLCVVGDDDQSIYGWRGAEVKHILGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVA 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSN 357 +N GR K+L G + +E EA VV I E AIL+R+N Sbjct: 297 HNRGRHEKRLIAHRG-GTSVVFREYPDEQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTN 355 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q R+ E L + + YRI GG FF+R+EIKD +YL+++ N DD + R++N P RG Sbjct: 356 EQPRIFEHELRRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPPRG 415 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL--AQETADM 475 IGD T + + + + W + + +A + L++F + + L A + + Sbjct: 416 IGDATCERLLARAVKEKRRFWDVIPDAAAAGEITSKALNNLRQFEKQMSGLREAFKQPGV 475 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN--LEELVTATRQFSYNEEDEDLMPLQA 533 L R+++ +G E+ Q + N L E A Q+ L+ Sbjct: 476 KLSETFLRMVETTGYAREIERTYKSAEQQEMRNLILGEFANAVSQYEAQSRSPS---LEG 532 Query: 534 FLSHAALEAGEGQADTWQD--AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--- 588 +L +L + A D A+ LMTLHSAKGLEF +V++VG+EEG+ P + S+DE Sbjct: 533 YLDEISLGGSDFAAPERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEEFE 592 Query: 589 -GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 +EEERRL YVG+TRA LT+T +++R +GK+ +PSRF+ E+ Sbjct: 593 NPSSVEEERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEM 641 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 237/656 (36%), Positives = 347/656 (52%), Gaps = 34/656 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q +AV + LVLAGAGSGKTRV+ H+IA ++ + P I A+TFTNKAAAE Sbjct: 92 LNLAQLQAVHYTQGACLVLAGAGSGKTRVITHKIAHMIE-QGLEPRRIAAITFTNKAAAE 150 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R L+G + V TFH L R++R L F I+D++D +LK A Sbjct: 151 MRERAKGLIGRRAKDVLVCTFHALGVRMVREDGAVLGLKPQFSIMDADDVAGILK---DA 207 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 RQ W I+ K+ GL + + E++ V Y+E VD Sbjct: 208 AGGTTDLATARQWQWTISKWKNMGLSSEQALAQAADDNERSIAVVMARYEERLAAYQSVD 267 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +L+ L + P + ++ ++LVDE+QDTN QY ++LL G+ G VGD Sbjct: 268 FDDLISMPLRLLRDHPEVRAKWQALLGHVLVDEYQDTNATQYELLKLLVGERGHFTAVGD 327 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DDQSIYGWRGA ++N+++ DFP + I+LEQNYRSTS IL AAN +I N K L Sbjct: 328 DDQSIYGWRGATLDNLKKLPQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFPKTL 387 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE---CAILYRSNAQSRVLEE 365 +++ +GEP+ + A E EA V RI++ + + AILYR+N Q++ E+ Sbjct: 388 FSELGEGEPVRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAKPFEK 447 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 AL +A++PY++ GG FF+R EIKD ++ RL N +DD AF R + P RGIG TL Sbjct: 448 ALRRANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNPKRGIGHTTLAA 507 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV- 484 + + + +++ A + A+ RA L F I+ L + A + R Sbjct: 508 LGAFATQHKQSMFGALFNGMLPAAVPKRALDGLHEFGRYINDL-EHRARHTHGAEDARAF 566 Query: 485 ----IKDSGL-RTMYEQEKGEK-GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +K+ G + +Y+ E EK R N+ E Q + + D+ + A + + Sbjct: 567 LADWLKEIGYEQHLYDGEDSEKVAAARWSNVMEFCDWMAQRAGGQIDDTAGAVVARETKS 626 Query: 539 ALEAGEGQA--------DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG- 589 LE + A + QD V L TLH++KGLE+P V +VG+ EGM P ++ DEG Sbjct: 627 LLEVSQTIALLSTISEREKEQDMVTLSTLHASKGLEWPHVVLVGVTEGMLPFKLDDDEGR 686 Query: 590 ---------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 RL+EERRL YVG+TRA + L +++ + R+ + V +PSRFI E+ Sbjct: 687 QQKVTDDTLQRLQEERRLMYVGITRAQRTLAVSWTKKRKKGREMVAAQPSRFIAEM 742 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 237/669 (35%), Positives = 347/669 (51%), Gaps = 58/669 (8%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q+EAV LVLAGAGSGKTRV+ H+I L+ I A+TFTNKAAAE Sbjct: 25 LNLAQQEAVNYLHGPCLVLAGAGSGKTRVITHKIGRLIQ-SGLKAEQIAAITFTNKAAAE 83 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR R L+G G+ + TFH L R+LR L Q F ILDS+D +LK + Sbjct: 84 MRERAKSLIGKQAKGVLICTFHALGVRMLRQDGQALGLKQQFSILDSDDVTSILKDAGGS 143 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACDRAGLVD 188 ++ RQ W I++ K +GL + N E+ +V Y+E VD Sbjct: 144 TDVA----TARQWQWTISAWKGQGLNAAQAAAQASNDEERLVARVMAHYEERLTAYQSVD 199 Query: 189 FAEL------LLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 F +L LLR HE NK +++ ++LVDE+QDTN QY ++LL G G+ Sbjct: 200 FDDLIGLPLKLLREHEAVRNK------WQQSLGHVLVDEYQDTNATQYEVLKLLVGTRGR 253 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 VGDDDQSIYGWRGA ++N+++ D+P + ++LEQNYRSTS IL AAN +I N Sbjct: 254 FTAVGDDDQSIYGWRGATLDNLKKLPEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPK 313 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA---------ECAIL 353 K L+++ +GEP+ + +E EA VV RI++ + G A + +L Sbjct: 314 LFPKTLFSELGEGEPVRVVDCDSEEHEAERVVARIQSLRAGGELQAVGSQYKEWKDFCVL 373 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+N Q++ LE+A +A +PY++ GG FF+R EIKD S++ L+ N +++ AF R V T Sbjct: 374 YRANHQAKPLEKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTT 433 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG TL + + +L+L++A L +A +LQ F ++ L + A Sbjct: 434 PKRGIGHTTLGTLGTFADQYKLSLFEALFSNSLSSVLPAKAVGSLQEFGRYLNEL-EYRA 492 Query: 474 DMPLHVQTDRVIKDSGLRT------MYEQEKGEK-GQTRIENLEELV------------T 514 + + R + L+ +Y+ E EK R N+ + Sbjct: 493 RRTVGAEDARTFLNDWLKEIDYEKHLYDGEDSEKVAAARWSNVMDFCDWMALRCGGQIDD 552 Query: 515 ATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVG 574 + +E+ L +Q + + EG Q+ V L TLH++KGLE+P V + G Sbjct: 553 TSGAVVESEKKTMLEVVQTIALLSTISEREGD----QNVVTLSTLHASKGLEWPHVMLAG 608 Query: 575 MEEGMFPSQMSLDEGG-------RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 EG+ P ++ D+G RL+EERRL YVG+TRA + L + + R+ + Sbjct: 609 CNEGLLPFKLEEDDGSNTDNIALRLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAG 668 Query: 628 RPSRFIGEL 636 PSRFI E+ Sbjct: 669 IPSRFIAEM 677 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 246/732 (33%), Positives = 379/732 (51%), Gaps = 46/732 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN QREAV A + V+AGAG+GKT L HR A+L++ P +++ TFTNKAA E Sbjct: 43 LNAAQREAVTATEGYVRVIAGAGTGKTLALAHRFAYLVNELGIMPGNVLCATFTNKAAGE 102 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI-- 127 MR RI +L G + G ++ TFHG +L+ P+ F +LD+ D +L+ + Sbjct: 103 MRRRIRRLTGDNDTG-YINTFHGFCVSVLQEDGHALQYPKSFLVLDNADIDAMLQVIYEE 161 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQA---------- 176 + + L + + + M I K+ RP + + P+E QK A Sbjct: 162 RGLTLRDMTFSKARDMIEIMKLKE---RPGYYRDMLAMPLEGLRQKYLDATDARDIIFYG 218 Query: 177 --YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 YQE + +D+ +L++ L+ P I +++R I+VDEFQD + +Q+ + Sbjct: 219 YLYQEK--KCFGLDYNDLIVFVLYLFEQNPDIRLKWQKRLEYIMVDEFQDIDGLQHELME 276 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +LAG + +VGD DQ+IY WRGA V + F FPG T+ + +NYRS +++ AN Sbjct: 277 VLAGYHKNLFVVGDPDQTIYTWRGADVRYLLDFDKRFPGTRTVMMLENYRSAPRVVAVAN 336 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILY 354 +LIE N R+ K+L + P A + EA ++ G A + A+LY Sbjct: 337 SLIEKNRERVPKRLAAMRSVHGPTVWRHAKSPDGEAAWIAQGALALHGEGVAYRDMAVLY 396 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R++ SR +EEALL+A +P+ +Y G+ FF R+EIKDALSYLRL+A + DD F RV N P Sbjct: 397 RAHYASRPVEEALLRAEVPHAVYSGVPFFGRREIKDALSYLRLVAYQ-DDLDFARVANAP 455 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 R +G R + +R+ + + +L++A + + A L ++L+D Sbjct: 456 KRNLGARRMAFLREKADELGCSLFEALERFVDDDLFKRTKARQL---LQLVDRFRSSYEG 512 Query: 475 MPLHVQTDRVIKDSGLRTMYEQE-KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 P+ V+ +SG YE+ + E Q R++NL EL + +F +E + L+ Sbjct: 513 RPVSEVLAAVLSESG----YERALRTEGSQERLDNLAELKQSVYEFETTCGEE--VTLEH 566 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 +L+H AL D QD V+LMT+H+AKGLEF VF+ M EG+ PS+ + D +E Sbjct: 567 YLAHTALLTNADAMDDAQDKVRLMTVHAAKGLEFAHVFLCSMTEGVLPSRKT-DTPQGME 625 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRLA+V +TRA L LT AE R G Y PSRF+ ++ +E A R Sbjct: 626 EERRLAFVAMTRARDGLYLTEAEGRGHEGAPRY--PSRFLLDIDPAALEFSNKPA--ERE 681 Query: 654 VSHQRMGTPMVE-------NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 + R + + D+ + +G RV HA FG G ++ ++ + +VAF Sbjct: 682 LDDARAAYALADRWIADLVRDARFAVGDRVTHAAFGSGRVLAVD--SQKRAYEVAFDDLD 739 Query: 707 IKWLVAAYARLE 718 ++ A+LE Sbjct: 740 TPRTISFKAKLE 751 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 230/643 (35%), Positives = 360/643 (55%), Gaps = 42/643 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SL+ Q EAV+ + +V AGAGSGKTR L ++IA+L++ + P I+A+TFTNKA Sbjct: 3 MQSLSPVQMEAVSHVETPAIVTAGAGSGKTRTLTNKIAYLVNNLHYDPERILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ ++ G S G WV TFH ++L+ H + I D+ Q LK+ Sbjct: 63 ADEMKSRLEKITGRSAGDFPWVRTFHSACFKILKVHCELLGYRKPLLIHDASQQKAHLKK 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 ++ +NLD A I+ K+ ++ S G + ++ Y+ Y E ++ Sbjct: 123 VLAELNLDRHYL--FAAASLISKAKNSADPVLYLASNGRVPRR--KEAYRIYNEMLAQSN 178 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF ++LL +L P I + YR RF ILVDEFQD+N IQ I LL D G++ + Sbjct: 179 SVDFDDILLLTRDLLQKYPEIRKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKD-GRLTV 237 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDD QSIY +RGA + F + A RLE+N+RST I++A++ LI +N R+ Sbjct: 238 VGDDYQSIYQFRGANPFHFINFPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIE 297 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLE 364 K+ ++ DG+P+++ +NE EA +V +R + D E AILYR+ S E Sbjct: 298 KQCFS-RRDGQPVTVETFYNEQMEAEWVADRCRELLNDENIPYREIAILYRTKFTSLPFE 356 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 AL A +PY + G FF+R+E++D +YL N +DD +FER+VN P RGIG L Sbjct: 357 RALRSAGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDISFERIVNVPRRGIGPGALK 416 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + ++R ++L A R+ + + + +AA+ L + + L++++A+E D +H RV Sbjct: 417 KIF-GCKERNMSLRDAARKAIDGRLIPKKAAAELDKLLSLLESIAEEKPDAAMH----RV 471 Query: 485 IKDSG----LRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +K++ L T+ + G+ +TR+EN++ ++ Y+ + +P +L AAL Sbjct: 472 MKETDYFAHLSTL--SDDGDDLETRLENIKSMI-------YDAAGKASIP--EYLEDAAL 520 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP--------SQMSLDEGGRL 592 + + V+L T+H+AKGLEF VF+V +EEG+ P S++ L+ G + Sbjct: 521 IRDDQDETDNGNGVRLSTIHAAKGLEFKAVFVVAVEEGILPHRKSIETESEIELERG--M 578 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 EEERRL YV +TRA + L+L+ A TRR G+ RPS F+ E Sbjct: 579 EEERRLMYVAMTRASELLSLSAAATRR--GE--LARPSPFLAE 617 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 347 bits (890), Expect = 8e-94, Method: Compositional matrix adjust. Identities = 226/661 (34%), Positives = 351/661 (53%), Gaps = 60/661 (9%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++Q++AV AP +LV+AGAGSGKTR L +R+A+L+ + +P I+ TFTNKAA E Sbjct: 8 LNEEQKKAVTAPLGPILVIAGAGSGKTRTLTYRVAYLIE-KGINPGRILLATFTNKAARE 66 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M +R+ +L+ T +W GTFH L H++LR H Q+F I+D ED ++LL I+ Sbjct: 67 MLNRVDRLVNTDTSQIWGGTFHHLCHKILRNHAKTIGFEQNFTIIDREDSIQLLTGCIEE 126 Query: 130 MNLD--EKQWPPRQAMWYINSQKDEGLRP---------HHIQSYGNPVEQTWQKVYQAYQ 178 +NL K +P +A+ + S ++P H+ + + + K+ Y+ Sbjct: 127 LNLKRGNKLFPSPEALLEVFSLVVNKVKPIWKTLEESFSHLAIFSDEI----TKLEYFYR 182 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + + D+ +LL +L+ K +IL+ Y+ F ILVDE+QDT+ IQ +I LL Sbjct: 183 ERKKKLLVFDYDDLLFYTVKLFQEKENILKFYQSYFEYILVDEYQDTSRIQADFIDLLGQ 242 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VM+VGDD QSIY WRGA++EN+ F +P I ++ NYRST IL+ ANA IE Sbjct: 243 SSQRVMVVGDDAQSIYSWRGAEIENMLNFPKRYPSTVVINIKTNYRSTPEILALANAAIE 302 Query: 299 NNNGRLGKKLWTDGADGEPIS--LYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 N + K+L + I L ++ +++ + I+ ++ G E AILYR+ Sbjct: 303 GNQFQFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDFRKQGIEAKEMAILYRA 362 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + + ++ L + +P+ I G+RFFE+ IKD ++LR N D+ AF+R+V Sbjct: 363 HFHALEMQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFFINPYDETAFKRIVKM-FN 421 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDALAQE 471 GIG +TL LW E L EK +AA + +M +D + Sbjct: 422 GIGPKTLS-----------QLWA---EYLASSGSIEKLRPPKAAE--KSWMSWLDIHKEL 465 Query: 472 TADMPLH---VQTDRV---IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED 525 ++ H Q +R+ + L+ +YE Q R+E++EEL+ ++ E+ Sbjct: 466 SSPGYAHQPSKQLERILHGVYADHLKMLYEC-----YQRRLEDIEELINFASLYNSTED- 519 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 FL+ +L G + V+L T+H AKGLE+ VFI+ + EG+FPS S Sbjct: 520 --------FLAQISLLTGVDTVQEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYS 571 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 L+ LEEERRL YV TRA +L L Y R ++ + PSRF+ ELP+ V + + Sbjct: 572 LNHPTLLEEERRLFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHLVIKTK 631 Query: 646 L 646 Sbjct: 632 F 632 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 233/753 (30%), Positives = 385/753 (51%), Gaps = 59/753 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +Q+EAV + L ++AGAGSGKTRV+ +IA+L+ E +P+ I+ +TFTNK Sbjct: 1 MLSNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R +++G + + TFH L + +L+ P++F+I+D D+ ++LK Sbjct: 61 AAREMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFEIVDESDKKQILKG 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT-------WQKVYQAYQ 178 + + + K A YI K + + S ++ + +Y+ Y Sbjct: 121 IYLELAITTKDVSIWDAFDYIAKMK----KNKYFSSIEEELDNENEEDLALLKNIYKGYV 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + L+DF +L++ +EL+ + Q + ++ +LVDEFQDT+ IQY +++LA Sbjct: 177 SYLKKQSLLDFDDLIILTYELFSSSDLTRQKWASKYDYVLVDEFQDTSFIQYEIVKVLAS 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + IVGD DQ+IY WRG+ + F DF +TI EQNYRST NIL AN LI+ Sbjct: 237 NKN-ITIVGDPDQNIYSWRGSDFRIMLNFDKDFENTKTINFEQNYRSTPNILEIANKLIK 295 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN R+ K L++ A G +N EA+++V +I ++ AI R+ Sbjct: 296 NNKNRMEKNLFSTSARGADPLFLTKYNNKLEAKWIVEKIIELSQQT-KYSQIAIFTRTAK 354 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR LEE L Q S+PY IYGG RFFER+ +KD L+YLRLI N + + +F RV+NTP R I Sbjct: 355 YSRDLEEELFQNSIPYVIYGGTRFFEREIVKDLLAYLRLI-NNSSEVSFIRVINTPRRSI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASA-----LQRFME-LIDALAQET 472 G +TL+ + + ++ ++ E L+ + S L++F++ +++A Sbjct: 414 GPKTLEKIITLASEKG---YEKSFEFLENLYINKNLQSFFSLKDLEKFIQAILEARESLK 470 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 D + +++++ ++ ++ ++ ++++L + ++ EE+ + L Sbjct: 471 NDQKIAYVLEKLVEKIDYKSFCIFDRNKRKDQVDFDIDQLYESI---AFWEEENPELLLD 527 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL---DEG 589 +L+ +L G + D V +MT HSAKGLEF VFI G+ E FP +SL D Sbjct: 528 DYLNEISLLTS-GDQNENSDQVSIMTAHSAKGLEFDYVFITGLAEKHFPHFLSLKSNDYD 586 Query: 590 GRLEEERRLAYVGVTRAMQKL------TLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 +EEERRL YV VTRA ++L TL +A R E+ SRFI E+ + Sbjct: 587 DEIEEERRLCYVAVTRAKKQLFLTAPLTLYWARDREKEELEI----SRFIEEMGLASSQN 642 Query: 644 VRLRAT----------------VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 R + VS + + +++ K+G ++H FG G +V Sbjct: 643 YEKRFSHKSLNDTDSYYQNSDYVSFDWKEKFVEQNYAKDNQEIKVGDLIKHDHFGVGKVV 702 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 E H ++ +GIK + + + + Sbjct: 703 KEEDEIIHVKMN---DHKGIKTFIKNHKSISKL 732 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 344 bits (882), Expect = 9e-93, Method: Compositional matrix adjust. Identities = 226/688 (32%), Positives = 363/688 (52%), Gaps = 48/688 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN Q+ A + + LL+LAGAGSGKT+ L R+A+L+ V + + +TFTNK Sbjct: 8 ILGNLNGVQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTLTLTFTNK 67 Query: 66 AAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 A+ EM+ R +L+ + + TFH LR H DF +LDS D+++ L Sbjct: 68 ASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDS-DEVKTLC 126 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 + +K N + M ++ Q E K Y+ YQ A + Sbjct: 127 KQLKISNFRASISQIKNGMMDLSMQDSE-----------------CYKAYELYQNALKKD 169 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 LVDF +LL + ++ + I + E + I+VDE+QDTN +Q +++ L+ + Sbjct: 170 NLVDFDDLLFLSLKILQDNETIAKETSEHYHYIMVDEYQDTNALQLEFLKKLSFTHHNLC 229 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYG+RGA + NI F F GA+ ++LE NYRS++ IL+ AN+LI +N R Sbjct: 230 VVGDDDQSIYGFRGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRH 289 Query: 305 GKKLWTDGADGEPISLYCA--FNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 K L + G S+ C + +E+ V +IK G L AILYR N SR Sbjct: 290 VKTLQS--FKGSHKSVICKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRS 347 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +EE+L ++PYR+ G + F+ER E+KDAL+++ ++A ++D +RV+N P RG+G T Sbjct: 348 IEESLNALNIPYRLIGAVSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNKPPRGLGKIT 407 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + D L L +A + + L + AL++FM +I L +E ++ + Sbjct: 408 QEWIFSLLDDEGLNLEEALKLGAFKDKLNPKNEYALKKFMAMIGRL-REAFEISVEEFCA 466 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 R ++++ L YE+E + + R ++EL+T ++ L+ FL+ + L+ Sbjct: 467 RFLEETNLLKSYEKE--DNYEEREGFVKELLTLLKEHFKTNPTHSLLD---FLNESVLDV 521 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 A+ Q V M++H +KGLEF VF++G+EEG FP + ++ LEEERRLAYV Sbjct: 522 --HNAENAQ-KVSCMSVHMSKGLEFKHVFVIGLEEGFFPHR-GFNQESDLEEERRLAYVA 577 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 +TRA + L L+Y + R +G+++ PS F+ EE +L P + TP Sbjct: 578 ITRAKEGLQLSYVKERSYFGRKISCSPSVFL--------EEAQLLQQDKPPKQDHKKDTP 629 Query: 663 MVENDSGYKLGQRVRHAKFGEGTIVNME 690 + K+G ++H FG G ++ +E Sbjct: 630 I-------KVGDLIKHKIFGTGRVLGVE 650 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 343 bits (880), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 222/639 (34%), Positives = 348/639 (54%), Gaps = 30/639 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 L+++Q+ AV S LV+AGAGSGKTR L +I L+ + P I+A+TFTNKAA E Sbjct: 3 LSEQQQTAVLHTGSPALVVAGAGSGKTRTLTAKIMHLIG-QGFDPTRILAITFTNKAAQE 61 Query: 70 MRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ +L G WV T+H + + H + QI Q +++ ++ Sbjct: 62 MKSRLYKLSGLGYAKFPWVRTYHSACLVIFKTHSHEIGYSSPIQICSIYQQKKIVTEILV 121 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 NL++K + I+ K+ + + +Y+AY++ A LVD Sbjct: 122 NNNLEKKH--AGNLISIISRAKNSANPDRYFDEHPRMGIIRVVDLYKAYEQRLFEANLVD 179 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +LL+ ++ + P I Q Y+++FT+ILVDE+QDTNN+Q RLL GD G + VGD Sbjct: 180 FDNILLKTRDILRDFPEIQQRYKQQFTHILVDEYQDTNNLQDELTRLLLGDHGNLFCVGD 239 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 D Q++YG+RG+ V + +F N + A RLE+NYRS I+ AAN LI+ N ++ KK Sbjct: 240 DWQAVYGFRGSNVNHFLQFSNRYDNARIFRLEENYRSADEIVQAANGLIDFNADKMDKKC 299 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL--AECAILYRSNAQSRVLEEA 366 ++ G + ++ F+E +EA +V R+K G + + A++YR+ S E+ Sbjct: 300 FSQKKGG-VVEIHEFFSEGEEAEWVAKRLKALNCKGEGIDFDKIAVVYRTKFCSLAFEKI 358 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 +PYR+ G FFER EI D SYL NDD +FER++NTP RGIG + + Sbjct: 359 FRMFKIPYRLMGAQGFFERMEILDINSYLSAAQFPNDDVSFERIINTPKRGIGPAMVKKI 418 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 T ++ ++L A R+++QE+ L + L + +EL+D+L D+P + +RV+ Sbjct: 419 -GTMKEEGMSLSGAARKMVQERVLTPKIHGELSKLLELLDSL----WDLPPNQAMERVLD 473 Query: 487 DSGLRTMYEQEKGEKGQ--TRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL-EAG 543 + +++ + + ++ EN+E+LV R+ S + +L AAL Sbjct: 474 GTAYFDYLKKKVKTEAEFISKKENIEQLVYTAREKS---------TILEYLEEAALIRED 524 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRLAYVG 602 D + V L+T+HSAKGLEF VF+VG EE +FP S+D G + ++EERRL YV Sbjct: 525 TKDEDDDGEGVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSIDAGEQAIQEERRLMYVA 584 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +TRA + L L++A Y K + SRFI ++ EEC+ Sbjct: 585 MTRAERFLYLSHAN----YRKGQFAMRSRFIDQI-EECM 618 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 242/668 (36%), Positives = 347/668 (51%), Gaps = 45/668 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L SLN +QR AVAAP +LV AGAGSGKTRVL RIA+L+ SP +I+A+TFTNK Sbjct: 8 LFASLNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNK 67 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMD--ANLPQDFQILDSEDQLRLL 123 AA EMR R+ + G S G+ GTFH + +LR H + DF I ++Q+ L Sbjct: 68 AAREMRQRLRDMPGVSIRGLTAGTFHSVCASVLREHIAGRIGSYTADFTIYAEDEQVHLA 127 Query: 124 KRLIKAMNLDEKQWP----PRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQ 178 A++ ++ P P + + +I+ K L P + + + + YQ YQ Sbjct: 128 S---AALDAARERPPALLEPEELLRHISRAKSRLLTPRLAARFARDDLARFVAGCYQRYQ 184 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA- 237 + +RA +DF +L+L H L+ P +L + R+ ++L+DE+QDT+ Q+A + LL Sbjct: 185 RSLERANALDFDDLILLTHRLFSEHPDVLDACQSRWRHVLIDEYQDTDPAQHALVELLTR 244 Query: 238 -----GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 G + VGD Q+IYG+R A I RF DFP A I L NYRS IL A Sbjct: 245 PSPANGGVRSLFAVGDGMQAIYGFRNADHTIISRFERDFPDARVIELATNYRSRQPILDA 304 Query: 293 ANALIENNNG------RLGKKLWTDGAD-GEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 A A+I ++ R K G P+ + A + DEA V I G Sbjct: 305 AYAVIRHSRTVQPMALRATKPETPRGVGYTSPLQIVDAKDARDEAERVARSIADLLRQGR 364 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+LYRS SR E AL A +PY + G FF+R ++DAL+YLR+I N D Sbjct: 365 RPQEIAVLYRSRHMSRAFESALRHARIPYALRGATGFFDRAVVRDALAYLRVINNPADTL 424 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 + R+ N P RG+G +L + + R LTL A L+ +ALA + A + +L Sbjct: 425 SLNRIANVPPRGLGANSLVTLSAFAGQRGLTLADA---LIHPEALALLPSKAAEGARQLA 481 Query: 466 DALAQ-----ETADMPLHVQTDRVIKDSGLRTMYEQE-KGEKGQTRIENLEELVTATRQF 519 L + E+A P H+ D V++ +G + EQ + E +L+EL A Sbjct: 482 ALLTRWRRLAESALSPDHLLAD-VLERTGYQAWLEQRLEPENVPDARAHLQELANAA--- 537 Query: 520 SYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGM 579 D L AFL AL D +D VQL T+H+AKGLE+P VF+VG+EEG+ Sbjct: 538 ------ADHTALNAFLQEVALLTSADDNDEERDRVQLSTIHAAKGLEWPIVFVVGLEEGV 591 Query: 580 FPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 P + SL ++EERRL YV +TRA ++L L++A + R+ GK +PSRF+ ++ Sbjct: 592 LPHEHSLVTPEGVDEERRLCYVALTRAGEQLYLSWAAS-RVRGK--LAKPSRFLNDIEAY 648 Query: 640 CVEEVRLR 647 E R++ Sbjct: 649 GRERARVK 656 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 341 bits (874), Expect = 7e-92, Method: Compositional matrix adjust. Identities = 234/663 (35%), Positives = 356/663 (53%), Gaps = 53/663 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND QR AV AP VLAG GSGKT VL+ R+A L+ E P I+ +TFTNKAA E Sbjct: 73 LNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREILCITFTNKAAKE 132 Query: 70 MRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQ-----DFQILDSEDQLRLL 123 +R R+ +G + + GTFH +A R+LR H +P +F I D++D +++ Sbjct: 133 LRERLRDKIGEVAAKEITAGTFHSVAARMLRRHG--ERIPGIGRTGEFTIYDADDSKQIV 190 Query: 124 KR-LIKAMNLDEKQWPPRQAMWYINSQKD-----EGLRPHH----IQSYGNPV----EQT 169 + L+ +K P +I++ K GLR ++ P+ +Q Sbjct: 191 QSVLVNKFGESKKTAQPGPMRNWISTAKSCVKHSVGLRGSQMLRALEDAKKPIPPMSQQR 250 Query: 170 WQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQ 229 + ++Y Y++ +A DF +LL + P + +Y R++ +LVDEFQDT+ Q Sbjct: 251 FVELYDEYEDGLRQANAFDFDDLLSATVAMLEMCPDVRAYYERRWSQVLVDEFQDTSTTQ 310 Query: 230 YAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSN 288 Y IR L+ G V +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRSTS Sbjct: 311 YELIRKLSQPQGSVFVVGDADQAIYGWRGAEVANIRTQFDQDFKEVQTHMLTTNYRSTST 370 Query: 289 ILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFV-VNRIKTWQDNGGAL 347 I+ AA A+I+ ++ L G +++ A ++ +EA F+ + K QD+ Sbjct: 371 IVEAAQAVIKESSFPSPLDLVAHTPGGRDVAIVEANDDREEAEFIALEARKLVQDSDLRY 430 Query: 348 AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 ++ A+LYR+N+Q+RVLEEA ++A +P+ + G F+ R+EIKD ++YLR+++N +D + Sbjct: 431 SDVAVLYRTNSQARVLEEAFIRAGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSSDTVSL 490 Query: 408 ERVVNTPTRGIGDRTL-------------DVVRQTSRDRQLT-LWQAC----RELL---Q 446 R++NTPTRGIG+ T+ D + + D L W+ ELL Sbjct: 491 NRIINTPTRGIGNSTIEKLNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGEQSELLPSAD 550 Query: 447 EKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 E L RA +A+ F+EL+ A Q + + VIK +G TM + G R Sbjct: 551 EMGLTARARTAVLNFVELMRACQQTAMNATPGELLEDVIKRTGYETMVLD--ADDGVDRW 608 Query: 507 ENLEELVTATRQFS--YNEEDED---LMPLQAFLSHAAL-EAGEGQADTWQDAVQLMTLH 560 ++EL+ ++ +E +D L L AFL +L + E T D +LMT+H Sbjct: 609 AFVQELINLAKEPPRDVDETIQDRVGLEALGAFLEGVSLLTSAETDDVTGGDKAKLMTMH 668 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 ++KGLEF VFI G+E+G+ P + D +EE RL YVG+TRA +KL L +A RR Sbjct: 669 ASKGLEFDTVFIAGVEDGLIPFIRNGDSDDDQDEEVRLFYVGITRAKRKLMLCHARERRR 728 Query: 621 YGK 623 +G+ Sbjct: 729 FGQ 731 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 233/716 (32%), Positives = 366/716 (51%), Gaps = 52/716 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q AV + + + AGAG+GKT L +IA+L+ + I+A+TFTNKA + Sbjct: 26 LNQTQLAAVTSNAKSFYLAAGAGTGKTTTLTAKIAYLIEQKKLPSNQILALTFTNKAVKQ 85 Query: 70 MRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAH--HMDANLPQDFQILDSEDQLRLLKRL 126 M+ ++ Q++G + G+ + TFH L ++LR + + +F+ILD D ++LK + Sbjct: 86 MKEKLDQMIGKEKTKGITICTFHSLGTQILRKFIPFLPFSYRNNFKILDDNDCKKILKDI 145 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-----YGNPVEQTWQ--KVYQ---- 175 +K MN+D P R + + + R H Q+ + E+ +Q K Y+ Sbjct: 146 LKEMNID----PKRVKISELKKSISDIKRKHEPQNEDTLQHSTQKEKNYQREKKYEFEMP 201 Query: 176 ---AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 YQ LVDF +L+L H+L ++ Y+++F +LVDEFQDT+ QY Sbjct: 202 IKVKYQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQQKFQYLLVDEFQDTDFFQYQI 261 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 + LLA + + +VGD DQ+IY +RGA+ EN Q FLN F + LE+NYRS+ NIL Sbjct: 262 LTLLAKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKF-KPKIAFLEENYRSSKNILDK 320 Query: 293 ANALIENNNGRLGKK-LWTDGADGEPISLYCAF--NELDEARFVVNRIKTWQDNG-GALA 348 AN LI+ N L KK L + + GEP+ C F + +E R++ I+ G + Sbjct: 321 ANLLIKYNKAHLFKKNLKSTKSGGEPV--ICKFFADYKEETRYIAKTIQNLVLQGVYSYQ 378 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 + ILYR+N R LEE L ++PY+++GG F++ + +KD L+YL IAN + D F+ Sbjct: 379 DFTILYRTNILGRPLEEKFLANNIPYQVFGGASFYQSKLVKDFLAYLNFIANPSQDFNFK 438 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL 468 R++NTP RGIG +L + + ++++++TL+ + L + + A + L +LI L Sbjct: 439 RIINTPKRGIGTTSLLHLEKLAQEKKITLFDTLK-YLDQTPIQPNAKTKLNELKKLITNL 497 Query: 469 AQETADMPLHVQTDRVIK-DSGLRTMYEQEKGEKGQTRIEN------LEELVTATRQFSY 521 Q+ + +D + D + + ++ K Q+ ++ +EEL + Q Sbjct: 498 RQKLINDSFDCLSDIITYIDEKIEYCRKNDETCKMQSIKDSDSDLYYIEELKSVFMQAEK 557 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDA--------VQLMTLHSAKGLEFPQVFIV 573 N E L L +L E T QD+ V+L T+H KGLEF VFI Sbjct: 558 NLEGSIFEKLTQLLDQISL-YNETNEQTEQDSKNPSKNDRVKLSTIHKVKGLEFRVVFIT 616 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 E+ F E LEE RRLAYV VTRA +KL LT A R YGK++ +PSRF+ Sbjct: 617 AFEDIFFDCNQK--EKSDLEESRRLAYVAVTRAEEKLFLTGAYQRFSYGKQIDSQPSRFL 674 Query: 634 GEL---PEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTI 686 E+ +E + +P +Q + ++ G +V+H G G + Sbjct: 675 QEMGIFQKETPRSNYFSPHLFQP--NQSNQASFTNGNGFFQKGDKVKHKTLGLGVV 728 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 223/647 (34%), Positives = 350/647 (54%), Gaps = 48/647 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND QR AV AP VLAG GSGKT VL+ R+A L+ P I+ +TFTNKAA E Sbjct: 1 LNDDQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHELKTPPREILCITFTNKAARE 60 Query: 70 MRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQ-----DFQILDSEDQLRLL 123 +R R+ +G + + GTFH +A R+LR H +P +F I D++D +++ Sbjct: 61 LRERLRDKIGDAAAREITAGTFHSVAARMLRRHG--DRIPGIGRTGEFTIYDADDSKQIV 118 Query: 124 KR-LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 + L+ +K P +I++ K + P + + + Y Y+ Sbjct: 119 QGVLVNKFGETKKTAQPGPMRNWISTSKSCPIPPMS--------HERFVECYDEYELGLR 170 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +A DF +LL + P + +Y R++ +LVDEFQDT+ QY IR L+ G Sbjct: 171 QANAFDFDDLLSATVAMLEMCPDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQPQGS 230 Query: 243 VMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRST+ I+ AA A+I+ + Sbjct: 231 VFVVGDADQAIYGWRGAEVANIRTQFDEDFKDVQTHMLTTNYRSTATIVEAAQAVIKESA 290 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVV--NRIKTWQDNGGALAECAILYRSNAQ 359 L + G +++ A ++ +EA F+ R +D +E A+LYR+N+Q Sbjct: 291 FPSPLDLVANTPGGRDVAIVEANDDREEAEFIALEARKSVKEDPDLRYSEIAVLYRTNSQ 350 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +RVLEEA ++A +P+++ G F+ R+EIKD ++YLR+++N D + R++NTPTRGIG Sbjct: 351 ARVLEEAFIRAGVPHKVIGDTSFYGRKEIKDMIAYLRVVSNSADTVSLNRIINTPTRGIG 410 Query: 420 DRTLDVVRQTSRDRQLTLW------QACRELL---QEKALAGRAASALQRFMELIDALAQ 470 + T++ +L+ W ELL +E L RA SA+ +F +L+ + Sbjct: 411 NSTIE---------KLSAWIDTLPKTDGTELLPSAEEMGLTTRARSAVLKFSQLMAETRE 461 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDL 528 + + +IK +G T+ + + G R ++EL+ ++ +E +D Sbjct: 462 KAKSSTPGELLEAIIKCTGYDTLVQD--ADDGNERWAFVQELINLAKEPPQDIDETIQDR 519 Query: 529 MPLQAFLSH----AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM 584 + L+A S + L + E + + D V+LMT+H++KGLEF VFI G+EEG+ P Sbjct: 520 VGLEALGSFLEGISLLTSAESKEEEGGDTVKLMTMHASKGLEFNSVFISGVEEGLIPFVR 579 Query: 585 SLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSR 631 + D +EE RL YVG+TRA +KL L +A RR +G+ +P+R Sbjct: 580 NGDSEDDQDEEVRLFYVGITRAKRKLMLCHARERRRFGQSA--QPAR 624 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 339 bits (869), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 229/726 (31%), Positives = 374/726 (51%), Gaps = 45/726 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL LN Q++AV L ++AGAG+GKT+VL ++++L+ VE +P+ I+AVTFTNK Sbjct: 20 LLADLNIAQKQAVLVMPKTLQIVAGAGTGKTKVLTRKMSYLIEVEQVNPFKILAVTFTNK 79 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLR--AHHMDANLPQDFQILDSEDQLRLL 123 AA EMR R + + + + TF+ L + +L+ HH+ + F ILD +D +L Sbjct: 80 AAKEMRERASAHINENTKNLQIYTFYNLCNLILKEDIHHL--GYSKTFSILDVKDIDNIL 137 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQK-DEGLRPHHIQSYGNPVEQTWQK---VYQAYQE 179 L +LD R Y +K + + I E +K VYQ+Y E Sbjct: 138 SLLYAKHDLDNLDLAYRTMRAYFKKRKLSDFVTNWEIFDRKEIDEDIMEKMDLVYQSYIE 197 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +LLL + L+ P + + + +F +LVDEFQDT+ +QY ++++A + Sbjct: 198 YTKENNFVDFEDLLLLVNHLFETNPKVRKKWESKFEYVLVDEFQDTSPLQYEILKVIAKN 257 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + IVGD DQ+I+ W GA + F DFP + I+LEQNYRST IL AAN LI Sbjct: 258 -AYLTIVGDPDQTIFWWHGADINIFLNFEKDFPESMKIKLEQNYRSTKKILDAANKLIAK 316 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N RL K L+T+ +GE I AFN EAR+VV +I + L ILYRS+ Sbjct: 317 NKRRLTKNLFTEKEEGEAIEFNHAFNIDAEARWVVTKINMLKKQKVQLKNIVILYRSSHV 376 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE+ L++ ++ ++I G +FFE++EIK+ + +L+ I + N AF + R + Sbjct: 377 SRALEQQLVKENINHQIVNGTKFFEKKEIKNLIYFLKTIYSAN-TLAFYNTLLFFVRSLA 435 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA------SALQRFMELIDALAQETA 473 + LD V + +L+L++ ++ + L A S L+ ++ L E Sbjct: 436 KKDLDEVLHQAAAAKLSLYKYIITRIKTENLGLSAKTRKETISLLKTIVKFKKLLKNEKH 495 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + D +K+ + ++ ++ + +N+ E +T +++ +E+ L Sbjct: 496 EANYSWIFDAFLKEVKFYDLINYDRDDENAIQ-DNVYEFLTLLQKW---QEENPSSELSK 551 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGG- 590 F AL + + + LMT+H+AKGLEF VFI+G+ E + PS +L +G Sbjct: 552 FFEDIALYSNRIDESAGNNFISLMTIHNAKGLEFDYVFIIGLNENILPSAKALYSKDGSI 611 Query: 591 ---RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL---PEECVEEV 644 +LEEERR+AYV +TRA K+ ++ A Y KE + SRF+ E+ E+ V+E+ Sbjct: 612 NYDKLEEERRIAYVALTRAKTKVFISDARGIDPYSKEP-KKTSRFLTEMGISLEDHVQEI 670 Query: 645 RLRATVSRPVSHQRMGTPMVENDSGYK---LGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 +++ + SG+ +G + H+ FGEG ++ ++ + S + V Sbjct: 671 NSITNITQEIQ------------SGHHSLIVGDFISHSSFGEGELLEIQDNDFESSIVVR 718 Query: 702 FQGQGI 707 F+ + + Sbjct: 719 FKNKVV 724 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 232/720 (32%), Positives = 376/720 (52%), Gaps = 45/720 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L+SLN Q+EA + LL+LAGAGSGKT+ L R+A+L+S+ + + +TFTNK Sbjct: 3 ILESLNAAQKEAAIHVDNALLILAGAGSGKTKTLTTRLAYLLSI-GIPAQNTLTLTFTNK 61 Query: 66 AAAEMRHRIGQLMGTSQGGM----WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 AA EMR R +L+ + M + TFH L+ + + F ++D +D+ + Sbjct: 62 AAREMRERALKLIESMSIPMINTPLLCTFHKFGLLFLQRYIHLLSRNSMFNVIDEDDKRK 121 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 +++ + K K+ P I+ K+ + P + + ++ +YQ Y++ Sbjct: 122 IIRNIKKNSKNIAKELTPATLSSAISDYKNNAILPDIAKQSPSMIDAQVAMIYQKYEDYL 181 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 LVDF +LLL + + + ++ I+VDE+QDTNN+Q + ++LL Sbjct: 182 YANNLVDFDDLLLLPYRILYENETLRTQISNKYQYIMVDEYQDTNNLQASLLKLLCATHE 241 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIY WRGA +ENI F F + ++LEQNYRST IL+ AN LI +N Sbjct: 242 NLCVVGDDDQSIYSWRGANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNLISHNT 301 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K L +G+ + + ++ E + ++ I+T G + + AIL+R N +R Sbjct: 302 TRYDKILKATRHNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGESYNDIAILFRLNTFAR 361 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +EE + + +++ G +RF++RQEIKD L+YLRL N +D+ + ER++N P R IG++ Sbjct: 362 HVEECFNRTKISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPKRSIGEK 421 Query: 422 TL-DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ----ETADMP 476 T D+V + +++ A + Q + + + L F LI++L + +++P Sbjct: 422 TFGDIVAASM--HYTSIYAAWK---QGGLSSLKCHAKLSEFFTLIESLRECLQLNPSEIP 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP----LQ 532 +T + + T + E + R +N++EL F E D +Q Sbjct: 477 HFFKTKIKLYADDIPT----KDSESNEDRRKNMDELFATLLDFIECERGGDYASNEEIIQ 532 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP----SQMSLDE 588 AFL+ AL + D+ + V M++H++KGLEF VF++GME+G+FP +MS+D Sbjct: 533 AFLNDIALSSSSDIEDS--NHVLCMSVHNSKGLEFKHVFVIGMEQGLFPLMNFYEMSIDS 590 Query: 589 GGR----LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 + L+EERRLAYV TRA LTL+YA+ R +G+ PS+F+ E + Sbjct: 591 VDKNTQNLDEERRLAYVAFTRAKDTLTLSYAKKRMHHGRYREFEPSQFLVESGVVSKQNA 650 Query: 645 RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 RLR S +G K G V+H FG G I ++ G G++S V F G Sbjct: 651 RLRDEESDKCV------------AGLKRGDCVQHKIFGFGRIESVRGLGDNSTAMVNFGG 698 >UniRef50_B4U5U9 UvrD/REP helicase n=1 Tax=Hydrogenobaculum sp. Y04AAS1 RepID=B4U5U9_HYDS0 Length = 715 Score = 334 bits (856), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 218/709 (30%), Positives = 375/709 (52%), Gaps = 31/709 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVE--NCSPYSIMAVTFT 63 LL+ LN++QR V + +LV+AGAGSGKT+ ++H+ +L+ + ++ +TFT Sbjct: 9 LLEGLNEEQRRVVLSNGKPILVVAGAGSGKTKTIIHKALYLIFNQEYKIRGSRLLMITFT 68 Query: 64 NKAAAEMRHRI---GQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 NKAA E++ RI ++G + W+GTFH +A R++R HH L DF++LD ED + Sbjct: 69 NKAANEIKERIQKYASVLGKNINIEWIGTFHSVASRIIRKHHAIFGLSNDFRVLDEEDSV 128 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL K ++K ++ + + + ++ +Q EG+R N ++ ++ + A Sbjct: 129 RLFKSILKDQDIKKDEA---KKLYIAVNQAIEGIR---FLDEDNKFDRKVLELKDIFLNA 182 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 V F+ L+ ++ +Y+ F I+VDEFQDTN QY I+ ++ Sbjct: 183 MIETSAVTFSYLMGAFKDMLQKDGAFRNYYQNFFDYIIVDEFQDTNTAQYEIIKHISKKD 242 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + ++GD +Q IY WR A +NI F+ D+ E I+L NYRS+S ILS AN +++N+ Sbjct: 243 N-ICVIGDPNQCIYEWRMAHPDNIISFIEDY-NPEIIKLNINYRSSSEILSLANDVLKNS 300 Query: 301 NGR-------LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 + L + +P+ + NE EA ++ +I+ L E AIL Sbjct: 301 KAKWKELVPILKSHKKENQTYPKPVITFHP-NEEKEAEWIAKKIEELS-KSVPLEEIAIL 358 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 R N + LE+AL++A +P++I G +RFF+R+EIKD L+YL L N D +F+R + Sbjct: 359 VRVNYITNFLEQALVKAKIPHKIIGALRFFQRKEIKDILAYLHLAINPKDSISFQRAITN 418 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL-AGRAASALQRFMELIDALAQET 472 P RGIG++T++ + S+ + + L QA + +L K A++R + ++ + Sbjct: 419 PKRGIGEKTVEKIINLSKQKSIDLIQATKYVLGNKLFEENDFIKAMERLVYNLEKGQAKD 478 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 ++ +V+ ++I D EQE E Q RI+N++EL+ + ++ L+ Sbjct: 479 RNISFYVE--KLINDIRYFEYLEQEYKEDYQERIDNVKELLRFFEIEAQKHQENQKERLK 536 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 L +L E + D + AV++MT+H AKGLEF VF+ +E G+ P + + + Sbjct: 537 ELLQEISL-MEEDEKDNSK-AVKIMTVHKAKGLEFEAVFMPRLENGILPHSSAFSDVLDM 594 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRA-TV 650 EEERRL YVG+TRA + L L+Y ++ + + LP++ +++ ++R T Sbjct: 595 EEERRLLYVGITRAKKYLFLSYTAAGKVSDFINIMDKTLLDTSFLPKDTLKDQKVRTLTH 654 Query: 651 SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 P+S++ + + D K+G V H FGEG ++N+ + R + Sbjct: 655 YEPISYKSSKNKVSKVD--IKVGDSVFHEVFGEGVVLNISNGVANVRFK 701 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 244/686 (35%), Positives = 361/686 (52%), Gaps = 57/686 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENC-SPYSIMA 59 MD+ +L+ LN QR AV +P S L VLA GSGKT+ L R+A+L+S ++ P ++ Sbjct: 1 MDIDPILNGLNAAQRTAVTSPSSILQVLAPPGSGKTKTLTARVAYLLSSKHAFRPQDVIC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFT KA+ EMR R+ L+G + +GTFH + R L A+ L + F I DS D Sbjct: 61 CTFTIKASREMRERLTHLIGDQVVSKLVLGTFHSICRRYLVAYGHLIGLKKGFGIADSND 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV---EQTWQKVYQ 175 L ++KR++K +NL+ + P R I+SQK +G+ + +P +Q + +VY+ Sbjct: 121 GLAIIKRIVKRLNLNIQPNPARS---RISSQKAQGISWQDLIDARHPKSVDQQEFVQVYR 177 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+ A + L+D+ +LLLR +L PH + + + +LVDEFQDTN IQY + L Sbjct: 178 EYEAALASSNLLDYDDLLLRCVDLLRQHPHCVSNVQ----TVLVDEFQDTNVIQYELMNL 233 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 A ++ IVGD DQSIYG+R A+++N++R +P + LE NYRS+ +IL +A Sbjct: 234 FAAQNKRITIVGDPDQSIYGFRSAEIKNLERMQRRYPNTSVVLLEDNYRSSGSILGSAEQ 293 Query: 296 LIENNNGRLGKKLW-TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL---AECA 351 +IE + R KKL T G P+ L EA+++V IK G L ++ A Sbjct: 294 VIEQDTARPVKKLHPTHGVGTMPV-LRKLPTAAAEAQWMVMEIKRCITLTGQLLKSSDFA 352 Query: 352 ILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV 411 IL RS A SR +E L + +PYR+ GG RFF+R EI+ L YLR+I++ ++ A R++ Sbjct: 353 ILLRSAALSRQIESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVISHPENNDALARII 412 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELID 466 N PTR IGD TL + + L LW +++ Q +K L+ A L + LI+ Sbjct: 413 NVPTRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGLSKAANIGLSVLVGLIE 472 Query: 467 ALAQETADM----PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV--TATRQFS 520 A Q+ D V + VI G R + R N+EEL+ S Sbjct: 473 ASRQKLHDCIDESSPRVLLEFVISKLGFREYLTATYPLDEENRWANVEELLAQAGDSSTS 532 Query: 521 YNEEDEDLMP----------------LQAFLSHAAL--EAGEGQADTWQDAVQLMTLHSA 562 Y+++D D++P L FL++ AL E + D Q+ V + T+H+A Sbjct: 533 YSQQD-DILPEIEGLEQHQGHIGEEALSRFLANVALSTEVTTEEGDQPQEKVTISTIHAA 591 Query: 563 KGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG 622 KGLE+P VF+ + EG+ P + D +EERRL YV +TRA L L+ G Sbjct: 592 KGLEWPVVFVAAVYEGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSLPRRDSKNG 647 Query: 623 KEVYHRPSRFIGELPEECVEEVRLRA 648 +E R S F LP V E + RA Sbjct: 648 EET--RTSSF---LPPSIV-EAKFRA 667 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 327 bits (839), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 214/650 (32%), Positives = 350/650 (53%), Gaps = 34/650 (5%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN Q EAV LL++AGAGSGKTRV+ HRIA+L+ ++ + I+A+TFTNKAA Sbjct: 9 SLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLL-LKGIAQKEILALTFTNKAAN 67 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM+ RI +++ + + V TFH L+ ++ ++F I D D++ LLK ++ Sbjct: 68 EMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDNDRISLLKEIL- 126 Query: 129 AMNLDEKQWPPRQAMWYINSQKDE-GLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 LDE + ++ NS + L + I + + E+ +++ Y+E Sbjct: 127 ---LDEGLLNKKVSL---NSLSNVISLFKNGILTLNDLKEEDIN-IFRLYEERLRLYNSF 179 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+L+ EL N I Y +R+ +L+DEFQDT+ IQY +IRLL + + VG Sbjct: 180 DFDDLILKPKELLSNNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLINHSN-LCCVG 238 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA N+ +F D+ A+ I+LEQNYRS NIL AN++I NN R K Sbjct: 239 DDDQSIYSWRGASYNNMLQFEKDY-NAKEIKLEQNYRSAKNILDVANSVILNNKNRKEKT 297 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLEEA 366 LW+ + I + +E+ E+ FV ++I + + G + +L R+NA + +E Sbjct: 298 LWSSKMCSKVIDFFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTNALFKNVEMI 357 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 + + Y++ GG FF+R+EIKD +SYL +I N D R++N P RGIG L + Sbjct: 358 FKRQGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIPRRGIGKEYLKKI 417 Query: 427 RQTSRDRQLTLWQACRELL--------QEKALAGRAASALQRFMELIDALAQETADMPLH 478 R + + ++ A ++ +K L + +++ F+ I+ Q + + Sbjct: 418 RDMADKKGCCIYDALCDIAFSFASISSYDKVLNKQVIESIEDFVSFIEE-YQYKFSIKKN 476 Query: 479 VQTDRVIKDS-------GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 ++ +IK+ G + + + +N+E ++ + + + E L L Sbjct: 477 TYSN-IIKEMIESIEYWGFLVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQLGE-LRDL 534 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP-SQMSLDEGG 590 +FL++ L++ E ++ + LMT+HSAKGLEF VF + +E+ + P ++ D Sbjct: 535 SSFLNYIVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRIIEDSEL 594 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR-PSRFIGELPEE 639 LEEERR+ YV +TRA L +T A R+ ++++ + PSRFI E+P+E Sbjct: 595 DLEEERRVFYVALTRAKDSLVITMANKRK-KDRQIFEQLPSRFISEIPKE 643 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 214/643 (33%), Positives = 342/643 (53%), Gaps = 46/643 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL+ LN+ Q+ AV +P + + VLA GSGKT+ L R+A+ ++ E P++I+ TFT K Sbjct: 4 LLEGLNEAQKSAVTSPANVVQVLAPPGSGKTKTLTARVAYHINHERLQPWNIIVCTFTIK 63 Query: 66 AAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ RI +G + + +GTFH +A R L + + + ++F I D+ D +LK Sbjct: 64 AAREMKERIKGFVGDKLEAKLILGTFHSVARRFLYRYGQEIGIDKNFGIADTSDSTSILK 123 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDR 183 R+I + P A I+ K +G+ + ++ N E + VY +YQE Sbjct: 124 RIITRYQYTVE---PGHARSRISKLKAKGITADDNTRTAKNVNENEFAMVYSSYQEHLAA 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 + L+D+ +LL+R +L P + + +L+DE+QDTNNIQY + LLA T ++ Sbjct: 181 SNLLDYDDLLMRCVDLLKKSPSCVSTIQA----VLIDEYQDTNNIQYELMSLLAQKTKRI 236 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 IVGD DQSIY +R A+++N+ R D+P + I LE NYRS+ ILS+A A+IE + R Sbjct: 237 TIVGDPDQSIYSFRSAEIKNLLRMRTDYPESVVINLENNYRSSGCILSSAMAVIEQDESR 296 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVV---NRIKTWQDNGGALAECAILYRSNAQS 360 K L GE +L + EAR++V +R KT + + AIL RS+ + Sbjct: 297 PQKALVATHGIGEQPTLRHLISANVEARWIVEEIHRTKTLTAGLLSFNDYAILVRSSPLT 356 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 +E AL QA +PYR+ G +FF+R EIK L YLR+I+ + + A RV+N P+R +GD Sbjct: 357 LQIERALGQAGIPYRMVAGTKFFDRAEIKIILDYLRVISQPDHNDAVARVINVPSRKVGD 416 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEK-----ALAGRAASALQRFMELI-----DALAQ 470 T+ + + + R++TLW+ ++ Q + ++ +A + +F+ +I L Sbjct: 417 VTVKALLEEAEVRKVTLWKLVLDVAQGRRKPQCKVSAQANIGISQFVNVILTSREKLLPA 476 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY-----NEED 525 ++ + L V+ ++ +Q E Q R N+EEL+ Q + E Sbjct: 477 KSDECDLFGLIMHVLNKIAFQSYLKQAHKENWQDRWANVEELINQATQMATAVANGEEIS 536 Query: 526 EDLMP---------------LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQV 570 +D +P L FL++ L + Q + D V + T+H+AKGLE+P V Sbjct: 537 DDALPEVEGLEQRSDTAADLLSKFLANVTLSSAADQDGSELDQVTISTIHAAKGLEWPVV 596 Query: 571 FIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLT 613 F+ + +G P + D+ +EERRL YVG+TRA L L+ Sbjct: 597 FMPAVYDGSIPHSRAEDQ----DEERRLLYVGMTRAQGLLYLS 635 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 227/645 (35%), Positives = 329/645 (51%), Gaps = 39/645 (6%) Query: 25 LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG- 83 +LVLAGAGSGKTRV+ RIA L+ S++A+TFTNKAAAEM R+G+L+G+ Sbjct: 1 MLVLAGAGSGKTRVVTTRIARLLD-RGIPARSMLAMTFTNKAAAEMHERVGKLVGSKVAR 59 Query: 84 GMWVGTFHGLAHRLLRAHHMDANL-PQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQA 142 + V TFH +L A L F I D D L +++ +++ + K + Sbjct: 60 ELKVCTFHRFGLDVLGAETRALGLRGGSFAIFDQSDALGVIREILRELRAG-KSYDVSAI 118 Query: 143 MWYINSQKDEGLRPH---HIQSYGNPVEQ---TWQKVYQAYQEACDRAGLVDFAELLLRA 196 + I++ K+ L Q G +++ VY Y A DF +L+ Sbjct: 119 LSRISNAKNAFLDAESWAEAQRQGKGIDEYDEISMLVYPRYMAALRSFQAFDFDDLICEV 178 Query: 197 HELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 LW + +L+ +R R+ ++VDE+QDTN Q +RLL G+ V++VGDDDQSIY W Sbjct: 179 VRLWQTRADVLERWRMRYRFVIVDEYQDTNRAQLELLRLLCGEHRNVVVVGDDDQSIYAW 238 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK-LWTDGADG 315 RGA V NI F F GA+ ++LE NYRS IL ANA++ + R KK L +G Sbjct: 239 RGADVRNILDFEEHFSGAKVVKLEHNYRSRKPILDVANAVLAKSGARRHKKSLIATRVEG 298 Query: 316 EPI-SLYCAFNELDEARFVVNRIKTWQDNGGALA-ECAILYRSNAQSRVLEEALLQASMP 373 + + S+ C ++ EA FV + + A + A+LYRSN Q+ +E AL + +P Sbjct: 299 DKVRSIICVDPDV-EASFVATEAQRLLEREAARPKDIAVLYRSNLQAAAIESALKERQIP 357 Query: 374 YRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDR 433 R+ GG +FFER+E+KD ++YLR+ N D+ R++N P RGIGD + + + Sbjct: 358 IRMIGGQQFFERKEVKDLIAYLRVALNPGDEMCLRRILNYPARGIGDAAVAKLGAYATAH 417 Query: 434 QLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLHVQTDRVIKDSGLR- 491 +LW A L A ++ + +I+A A+ P ++ D+G + Sbjct: 418 DASLWTAVSRPHAVHELTSAAIEGCRQLLRIIEATRARFERGEPSAEVARALLADAGFKE 477 Query: 492 -TMYEQEKGEKGQTRIENLEELVTATRQFSYNEE--DEDLMPLQAFLSHAALEAGEGQAD 548 M R N+E L+ F+ +E D FL AL + + + Sbjct: 478 DIMAGSSTANAAARRWGNIEGLLNV---FARRDEKGKGDRASFAEFLRLLALRQ-DSEEE 533 Query: 549 TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE----------------GGRL 592 D V L T+H AKGLEFP VF++G+EEG+ P Q SLDE G + Sbjct: 534 EATDRVTLTTMHGAKGLEFPYVFVIGLEEGLMPHQRSLDERATDAAPSGAEGGDTGGHSI 593 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 EEERRL YV VTRA +L LT A+ R GK V PSRF+ E+P Sbjct: 594 EEERRLFYVAVTRARDRLYLTRAKHRGSRGKMVPRTPSRFMLEIP 638 >UniRef50_B6IP09 UvrD n=8 Tax=cellular organisms RepID=B6IP09_RHOCS Length = 1178 Score = 322 bits (824), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 178/394 (45%), Positives = 244/394 (61%), Gaps = 12/394 (3%) Query: 251 QSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWT 310 SIYGWRGA+V NI RF +DF GA IRLEQNYRST++IL AA+ +I NN GRLGK+LWT Sbjct: 675 NSIYGWRGAEVGNILRFDHDFTGARVIRLEQNYRSTAHILGAAHGIIANNQGRLGKQLWT 734 Query: 311 DGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQA 370 + GE + + ++ +EAR+V + I+ Q G +L + A+L R+ Q+R EE + Sbjct: 735 EVDGGEKVRVRGLWDAEEEARWVGDEIEALQRKGLSLGQMAVLVRAGFQTREFEERFITL 794 Query: 371 SMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTS 430 +PYR+ GG RF+ERQEI+DAL+YLR++A +DD AFER++N P RGIGD TL + + Sbjct: 795 GLPYRVIGGPRFYERQEIRDALAYLRIVAQPDDDLAFERIINVPKRGIGDATLRQLYVAA 854 Query: 431 RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGL 490 R ++L +A L + L G+ S L+ ME I + P ++ +SG Sbjct: 855 RTLGVSLAEATWRLTETDELRGKVRSTLRALMEDIARWRGQIDRTPHTDLAQAILDESGY 914 Query: 491 RTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTW 550 M++Q+K + R+ENL+EL+ A +F L FL H AL +A Sbjct: 915 TRMWQQDKSPEAPGRLENLKELINAMGEFEN---------LTGFLEHVALVMDNAEASGL 965 Query: 551 QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVGVTRAMQ 608 + V LMTLH AKGLEF VF+ G EEG+FPSQ +LDE G LEEERRLAYVG+TR Sbjct: 966 EQ-VSLMTLHGAKGLEFDVVFLPGWEEGLFPSQRTLDENGIAGLEEERRLAYVGITRGRI 1024 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 ++ +++A RR++G PSRF+ ELP E VE Sbjct: 1025 RVHVSHAANRRIHGSWATSLPSRFVDELPAEHVE 1058 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 113/249 (45%), Positives = 150/249 (60%), Gaps = 2/249 (0%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN QREAV A +LVLAGAG+GKTRVL R+A L+ P++I+ VTFTNKA Sbjct: 39 LAGLNPAQREAVEALDGPVLVLAGAGTGKTRVLTTRLAHLLVTRRAGPWNILTVTFTNKA 98 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+ L+G G W+GTFH LA R+LR H L F ILD++DQ+RLLK+L Sbjct: 99 AREMRERVEALVGVPTEGWWMGTFHALAARILRRHAELVGLKPSFTILDTDDQIRLLKQL 158 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRA 184 ++A N+D K+WP R + I KD+ L P + + G+ +Y+ YQ+ Sbjct: 159 MEAENIDSKKWPARVLLGAIERWKDKALTPDRLKREDAGDMAGGRLIDLYRQYQDRLLSL 218 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LLL L+ +L+ Y++RF ILVDE+QDTN QY W+RLLA + Sbjct: 219 NACDFGDLLLHNIALFQKHNDVLREYQDRFRYILVDEYQDTNVAQYLWLRLLAQAHRNIC 278 Query: 245 IVGDDDQSI 253 VGDDDQ + Sbjct: 279 CVGDDDQCL 287 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 320 bits (821), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 231/675 (34%), Positives = 350/675 (51%), Gaps = 49/675 (7%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++Q AV AP LV+AGAGSGKTR L R+ +L+ + I+ +TFTNKAA E Sbjct: 24 LNEQQHAAVTAPPGPSLVIAGAGSGKTRTLTFRVGFLLE-QGIPADRILLLTFTNKAARE 82 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+ L+G +W GTFH + +R+LR H +DF I+D ED L+ + Sbjct: 83 MMRRVSDLLGQDLPSLWGGTFHSIGNRILRQHAPLLGYQRDFSIMDREDAKDLVDACVAE 142 Query: 130 MNLDEK--QWPPRQAMWYI-----NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +D K ++P + I N+Q+ Y + + + Y Sbjct: 143 AEIDVKATRFPKADVLADIFSLGLNTQRSIPEVLAQEYDYFENLAPQIADIKERYILRKK 202 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL +L P + +HY+ RF ILVDE+QDTN +Q I LLA Sbjct: 203 STNAMDFDDLLELWLKLLKEHPEVREHYQRRFQFILVDEYQDTNALQSELIDLLAARHHN 262 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 VM+VGDD QSIY WRGA +NI +F + A ++E NYRST IL+ ANA I N Sbjct: 263 VMVVGDDAQSIYAWRGANFQNIIKFPERYSEARVYKIETNYRSTPEILNLANAAISANVK 322 Query: 303 RLGKKLWTDGADG-EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 + K+L G +P+ + C ++A FV R+ ++ G + + A+LYRS+ + Sbjct: 323 QFEKQLTPARKSGLKPVLVPC-MTASEQASFVAQRMLELREEGVNMNQMAVLYRSHFHAL 381 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 L+ L + ++P+ I G+RFFE+ IKD +Y++L+ N D+ AF+R+V G+G + Sbjct: 382 ELQLELTRRNIPFSITSGIRFFEQAHIKDVAAYIKLVNNPRDELAFKRLVQL-LPGVGGK 440 Query: 422 TLDV---------------VRQTSRDRQL---TLWQACRELL------QEKALAGRAASA 457 D ++ +RD L T +A R + A+ + A A Sbjct: 441 GADKLWARFQSAFKVIPENLQADARDTLLPSETSTKADRNPVATALQASASAVPKKTAVA 500 Query: 458 LQRFMELIDALAQETADMPLHVQTDRVIK---DSGLRTMYEQEKGEKGQTRIENLEELVT 514 +F+ I L E P+ +TD++I+ ++G + QE + R++++E+L Sbjct: 501 WAQFVATISQLETE----PVRGKTDKMIRLIVEAGYDE-HLQENYANYRNRLDDIEQLAL 555 Query: 515 ATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVG 574 +QFS EE + A LS+ E E A+ + V+L T+H AKGLEF VFI+ Sbjct: 556 FAQQFSTTEE---FLAQLALLSNLEAETDEP-ANNDNEQVKLSTIHQAKGLEFDVVFIIM 611 Query: 575 MEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG--KEVYHRPSRF 632 + +G+FPS SLD EEERRL YV +TRA +L L+Y R + G + +PSRF Sbjct: 612 LCDGLFPSARSLDTAEGEEEERRLLYVAITRARNELYLSYPLIRMMPGGSGDAMQQPSRF 671 Query: 633 IGELPEECVEEVRLR 647 + ELP+E ++E L+ Sbjct: 672 LSELPKESLDEWNLK 686 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 230/667 (34%), Positives = 344/667 (51%), Gaps = 54/667 (8%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND+Q AV A LLVLAGAGSGKTR L +R+A+L+S P I+ +TFTNKAA E Sbjct: 22 LNDEQFAAVTAEPGPLLVLAGAGSGKTRTLTYRVAYLLS-RGVKPGEILLLTFTNKAAKE 80 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK- 128 M HR+ L G W GTFH L HR LR + LP++F ILD+++ LLK+ ++ Sbjct: 81 MLHRVQDLTGIEPQRFWGGTFHSLGHRALRIYGDAIGLPKNFTILDADESESLLKQAVEH 140 Query: 129 --AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR--- 183 + +K P ++ + S ++ P+ T K + Y E R Sbjct: 141 EDKLFFKDKTNPRPGPLFDVLSLA---------RNTQQPLADTVAKNFPQYTEIAHRFPA 191 Query: 184 -----------AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 +VD+ +LL EL + P + Q++ RF ++LVDE+QDTN +Q Sbjct: 192 FATAYATRKREQNVVDYDDLLEFWLELLIKAPEVAQYFAHRFRHVLVDEYQDTNTLQAQI 251 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 + LA VM VGDD Q IY WRGA ENI F + PG R+E NYRST IL+ Sbjct: 252 VDRLAAHHC-VMAVGDDAQCIYSWRGANFENIMTFPDRHPGTAIHRIETNYRSTPEILNF 310 Query: 293 AN-ALIENNNGR-LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAE 349 AN L+ GR K+L + + A ++ ++A F++ RI+ +D G +L E Sbjct: 311 ANGVLLAQPKGRHFDKELRAARGHAQKPFVVQAMDDREQAEFILKRIRALVEDEGVSLNE 370 Query: 350 CAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFER 409 AILYRS+ + ++ AL +A +PY+I G++FFERQ I+D ++ LR + N D A++R Sbjct: 371 VAILYRSHFLALEVQLALSRAGVPYQITSGVKFFERQHIRDLVALLRFVYNGADTQAWQR 430 Query: 410 V-VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL 468 + V P IG++ + + D + ++L + + A + A Sbjct: 431 IAVLLPK--IGEKGAQKIYAAAVDHARLTQKNLLDVLNTDDVRSKVAKDARDDWASFCAS 488 Query: 469 AQETADMPLHVQTDRVIKDSGLRTMYEQEKGE--KGQ-----TRIENLEELVTATRQFSY 521 E A+ H + + T E G+ KGQ R++ L+ LV ++F Sbjct: 489 LSEVAEKMQHARPADAVA-----TAIEGWYGDYLKGQYADYLDRLDELKALVGFAQRF-- 541 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581 EE +D + L+ E + D +AV+L T+H AKGLE+ VF++G+ +G FP Sbjct: 542 -EETQDFLAQIVLLNS---ETSDRHVDPEAEAVRLTTVHQAKGLEYDVVFVIGLADGQFP 597 Query: 582 SQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK-EVYHRPSRFIGELPEEC 640 + S+ E G +EEERRL YV VTRA +L L+Y + G + PSRF+ E+P + Sbjct: 598 GRRSI-ESGDVEEERRLFYVAVTRARNELYLSYPKVATRGGPGGMLLTPSRFLLEVPTDL 656 Query: 641 VEEVRLR 647 E +R++ Sbjct: 657 YEPLRIK 663 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 229/684 (33%), Positives = 354/684 (51%), Gaps = 66/684 (9%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD LN Q AVA+P L VLA GSGKT+ L R+A+L++ P ++ TFT K Sbjct: 4 ILDGLNSAQTAAVASPAPILQVLAPPGSGKTKTLTARVAYLLAHHGYRPQDVICCTFTIK 63 Query: 66 AAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 A+ EMR R+ +L+G Q + +GTFH + R L + L + F I DS D L ++K Sbjct: 64 ASREMRERLAKLIGDELQKKLILGTFHSICRRYLVTYGYLIGLKKGFGIADSGDSLAIIK 123 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-----VYQAYQE 179 R++K + + + P A I+ QK G+ P + + N + ++ VY+ Y+ Sbjct: 124 RIVKRLQVGIQ---PNAARARISHQKAHGVSPDELAAKLNKNSKVLEQREFVQVYREYEA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + L+D+ +LL+R EL P + + + +LVDEFQDTN+IQY + L A Sbjct: 181 NLAASNLLDYDDLLVRCVELLRKHPQCVSNVQA----VLVDEFQDTNHIQYELMNLFASQ 236 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 ++ +VGD DQSIYG+R A+++N+ R + + LE NYRS+ ILS+A +IE Sbjct: 237 NQRITVVGDPDQSIYGFRSAEIKNLGRMQQLYKDTSIVLLEDNYRSSGCILSSAQDVIEQ 296 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL---AECAILYRS 356 ++ R KKL + G L N EA ++V IK G L ++ AIL RS Sbjct: 297 DSSRPAKKLQPTHSLGTMPVLRKLPNSESEALWIVLEIKRCIALTGKLVNYSDFAILLRS 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 A SR +E + + +PYR+ GG+RFF+R EIK L YLR+I+ + A R++N P+R Sbjct: 357 AALSRQIEAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDALLRIINVPSR 416 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDALAQE 471 +GD +++++ + + + LW +++ Q EK+L+ A + L + LI++ Q+ Sbjct: 417 KLGDESVNLLTKGAEKAKKPLWDFIKDVAQGRSSTEKSLSKPADNGLCTLVGLIESARQK 476 Query: 472 TADM-----PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF----SYN 522 + P + D +IK R + G + R N+EEL+T + Sbjct: 477 LCECTDGSSPRKL-LDFLIKKLSFREYLKALHGSNEENRWANVEELLTQADDTPGPENEA 535 Query: 523 EEDEDLMPLQA---------------FLSHAAL-------EAGEG-QADTWQDAVQLMTL 559 E DE+L +Q FL++ AL E EG Q+D + V + T+ Sbjct: 536 ENDENLPEIQGLEQQQAHPGEEALSRFLANVALSTEVLPQEGEEGEQSD---EKVTISTI 592 Query: 560 HSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRR 619 H+AKGLE+P VF+ + G+ P + D +EERRL YV +TRA L L+Y + Sbjct: 593 HAAKGLEWPVVFVPAVLNGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSYPLRQS 648 Query: 620 LYGKEVYHRPSRFIGELPEECVEE 643 G+E S F LP + VEE Sbjct: 649 RDGEEATL--SSF---LPSKLVEE 667 >UniRef50_B5RLS9 DNA helicase n=24 Tax=Borrelia RepID=B5RLS9_BORDL Length = 698 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 211/625 (33%), Positives = 339/625 (54%), Gaps = 46/625 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSN-LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 ++ L SLN Q++ V +N +LVLAG GSGKTRV+ + A L++ P I+A+ Sbjct: 4 EIQKFLFSLNFDQKQIVFDDTTNPILVLAGPGSGKTRVITAKFAHLINEGKVKPEEILAL 63 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH--MDANLPQDFQILDSED 118 TFTNKAA EM R+ L + + + TFH LLR + D N +F I D D Sbjct: 64 TFTNKAAREMNFRLNSLFNFDRS-LHIQTFHSFGAWLLRLYFKEYDENYDSNFTIWDVND 122 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 ++ +K++ A N++ ++ + Y E H+ + + + + ++ + Y+ Sbjct: 123 VVKFVKQIGLASNIECAKYVTSSILKY-----KENYSLHNNCGFDDKI---YSEI-EFYE 173 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + ++ DFA+L+L++ + N +I ++RF I VDE+QDTN Q+ ++R L Sbjct: 174 QEKSKSNAFDFADLILKSVLMLQNCENIRMRVQKRFKAIFVDEYQDTNYSQFLFLRELYY 233 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 M+VGD+DQSIY +RGA+VENI F F L QNYRS+ +I++ AN +I Sbjct: 234 KDAYFMVVGDEDQSIYSFRGARVENILEFERTFDNVSKYYLVQNYRSSLSIVNVANNIIS 293 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N R K + T+ G+ I ++ N +EA + N + + E A+LYR N Sbjct: 294 KNQNRYDKVIATENKIGKKIKIFIFQNPTEEAEYFANFLIENK------LETAVLYRFNH 347 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QS E+A + ++ ++I G +RF+ER+EIKD +S LRL N+ D +F R++N P RG+ Sbjct: 348 QSLQFEKAFFKNNIAHKILGSIRFYEREEIKDVISLLRLFVNKKDKVSFLRIINKPARGL 407 Query: 419 GDRTLDVVRQT--SRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G T+D + T D L L A R+++ K L G+A +L F+ L D L +E Sbjct: 408 GKTTIDKIIATLNDTDVNLDLMLASRKVV--KNLKGKARDSLDIFLSLYDEL-KENIQKG 464 Query: 477 LHVQTDRVIKDS----GLRTMYEQ-EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 ++V IKD G+ Y++ +K EK + N++EL+++ ++S + E L Sbjct: 465 IYVNLSEFIKDVTMGFGIWNYYQKFDKDEKSK----NIDELISSGVEYSGSFE-----GL 515 Query: 532 QAFLSHAALEA---GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE 588 FL +++L G+ + +V L ++H KGLEF +V I G+E+G+ P+++ Sbjct: 516 VIFLENSSLSPLVHGD-----FASSVLLSSIHGVKGLEFDRVIISGLEKGLLPAEIEELT 570 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLT 613 RLEEERRL YV +TRA +L +T Sbjct: 571 ADRLEEERRLFYVAITRAKFELFIT 595 >UniRef50_B6K032 ATP-dependent DNA helicase srs2 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K032_SCHJY Length = 819 Score = 314 bits (805), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 219/656 (33%), Positives = 342/656 (52%), Gaps = 57/656 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L +LN +Q+++ +P +LAG GSGKTRVL R+ L++VE P I+ Sbjct: 1 MDAKQYLAALNPQQKQSAESPHKYTQILAGPGSGKTRVLAARVVHLLNVEQFHPNDIVIA 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWV-GTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA E++ RIG+L+ + V GTFH +A L H LP+++ ++D + Sbjct: 61 TFTNKAANEIKQRIGKLVKDNHANSLVSGTFHSIAFHYLLRHGKKVGLPKNWTVIDRTEA 120 Query: 120 L----RLLKRLIKAMN-----LDEKQWPPRQAMWYINSQKDEGL--RPHHIQSYGNP--- 165 +LL+RL KA N + ++ P A+ ++ K GL +PH Q P Sbjct: 121 TNIMKQLLERLRKAKNPTADGIRGQELTPNVALSRVSRMKSSGLIAKPHCEQLSCLPGLT 180 Query: 166 --VEQTWQ--KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDE 221 Q++Q ++Y+ YQ + G VDF +LL+ L++ H + + +ILVDE Sbjct: 181 VNTNQSFQSTELYKLYQAVLRKNGYVDFDDLLI----LFIQLVHDHTYCIDNIKHILVDE 236 Query: 222 FQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 FQDT+ IQY I+LLA DT + IVGD DQSIYG+R A++ N+ DFP LE Sbjct: 237 FQDTSKIQYLLIKLLARDTSGITIVGDPDQSIYGFRSAELGNLVMMTTDFPDTRVFHLET 296 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELD----EARFVVNRI 337 NYRS +IL A A+I + R K L T +S+ F E D E+ +V I Sbjct: 297 NYRSADSILETAMAIINQDKARPQKTLRT----SHRLSIKPYFKEFDSNDQESAWVACEI 352 Query: 338 KTWQDNGGAL---AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSY 394 K + L ++ AIL RS++ +R +E AL + + Y++ G +FF+R+E++D ++Y Sbjct: 353 KRMVKSCPGLFSYSDIAILVRSSSLTRAIEHALAEQGIAYKMVGVHKFFDREEVRDVVAY 412 Query: 395 LRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQA-CRELLQEKALAGR 453 R++A R D+ A R++N P+R IG ++ + Q + R ++W C +L+ R Sbjct: 413 ARVVAFR-DEQALMRIINVPSRNIGKVKVERILQETERRHTSMWNTLCLLNNGSFSLSQR 471 Query: 454 AASALQR----FMELIDAL-AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN 508 QR FM +I+ A + P + + I ++ YE K + T E Sbjct: 472 VDKQFQRELGKFMHVINTTEASCDSSAPFSISSMLEILLRKVK-YYEYLKKKHPSTYEEK 530 Query: 509 LEELVTATRQFS--------YNEED---EDLMPLQAFLSHAALEAGEGQADTWQDAVQLM 557 E ++ RQ +++ED E+ + L FL++AA+ + + V + Sbjct: 531 WENVMELIRQSDVLGEQGVLFDDEDDISENRLALHRFLANAAIVGSTDNNEETRHQVTIS 590 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLT 613 TLH+AKGLE+P VF+ + + + P S D ++EERRL YVG+TRA L ++ Sbjct: 591 TLHAAKGLEWPVVFLPCLCDTILPHSRSTD----VDEERRLLYVGITRAQAMLYMS 642 >UniRef50_Q600N7 ATP-dependent DNA helicase n=6 Tax=Mycoplasma RepID=Q600N7_MYCH2 Length = 769 Score = 314 bits (804), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 236/782 (30%), Positives = 392/782 (50%), Gaps = 92/782 (11%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M +L LN+KQ+ AV + S+L ++AGAG+GKT VL +IA++++ P I+A+ Sbjct: 17 MSSQNILLQLNEKQKIAVISNSSHLRIVAGAGTGKTSVLTKKIAYIINESLAYPSRILAL 76 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMD----ANLPQD---FQI 113 TFTNKAA EMR+R+ +L+G + + TFH L + +LR + + +P F I Sbjct: 77 TFTNKAAEEMRNRVEKLVGEKSKDIQILTFHSLCNLILRLEAKNIVELSEIPLSDYRFNI 136 Query: 114 LDSEDQLRLLKRLIKAM-----NLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVE 167 +D +DQ +++++L+ + DE + A+ +I++ K+ P + +S N ++ Sbjct: 137 IDEQDQKKIVEKLLGKYLKANDDRDETKISAFDAIKFISNAKNWEKSPEDLLKSINNELD 196 Query: 168 QTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNN 227 Q +VYQ Y E ++DF +LLL + P I ++ +F +LVDEFQDT+ Sbjct: 197 QIKVQVYQKYLEKTKENNIIDFDDLLLYTKIAFEKSPEIRSRWQRKFDFVLVDEFQDTSL 256 Query: 228 IQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 +QY +++ D ++++VGD DQ+IY WRGA I DFP +T+ L++NYRST Sbjct: 257 VQYLILKIFIKDKTRLVVVGDPDQTIYSWRGADPSLILNLEQDFPDLQTVILDKNYRSTQ 316 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELD-EARFVVNRIKTW-QDNGG 345 NIL AAN LIENN R+ KKL + I NE E ++ +I+ N Sbjct: 317 NILDAANNLIENNQNRIKKKLVASSKEKIEIHFEDLANERGAEVEWIYRKIQELITKNKV 376 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 + AIL RSN + +E ++PY +G ++EI++AL +L++I N +D Sbjct: 377 TYRDIAILARSNFYFKQIETKFDGHNIPYFRHGASPLVTKKEIREALYFLKVIDN-SDPY 435 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACREL--------------------- 444 AFE+++N P + IG T++ + + + L L + Sbjct: 436 AFEQIINVPPKKIGIATINKLNELAAQFGLNLHDFLFKYYSGKINFKGKQGKIPLGHDNQ 495 Query: 445 LQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTM--YEQEKGEKG 502 L+ K L R ++A +RF I+ P Q + DS L+ + ++ K K Sbjct: 496 LKIKVLLERISAA-KRFKSQIE------EKKPCIFQFYSQVLDSFLKKIDYFDAIKDAKQ 548 Query: 503 QTRIENLEELVTATRQFSYNEEDEDLMP---LQAFLSHAALEAGEGQADTWQDAVQLMTL 559 + NL E + + + + P L +L +AA+ E Q ++ Q+ + L+T+ Sbjct: 549 ASDTRNLLE-----KYYKIMDNWQKANPEKKLSDYLDYAAISHFE-QTES-QNKINLLTV 601 Query: 560 HSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--GRLEEERRLAYVGVTRAMQKLTLTYAET 617 HS+KGLEF VF+VGM +G+FP+Q LD+ EEERRLA+V VTRA Sbjct: 602 HSSKGLEFEYVFLVGMNQGVFPAQKVLDQNSTSEYEEERRLAFVAVTRA----------K 651 Query: 618 RRLYGKEVYHRPSRFIGELPEE----------CVEEVRLRA---------TVSRPVSHQR 658 R LY Y PS F LP++ V+E++++A + +++ + Sbjct: 652 RVLYITNGYRAPS-FARGLPQKFKTNQNIVSAFVKEMKIKAERFAQFRKLDETGKLNYTK 710 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 + +VE + G ++ H KFG G ++ + + +GIK L+ + ++ Sbjct: 711 DKSEIVE----FVAGDQINHLKFGRGIVLEVRIDSILVKFFEIPGDKGIKTLIKTHKSID 766 Query: 719 SV 720 + Sbjct: 767 KI 768 >UniRef50_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=2 Tax=Filobasidiella neoformans RepID=Q5KJH7_CRYNE Length = 982 Score = 310 bits (795), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 200/540 (37%), Positives = 294/540 (54%), Gaps = 38/540 (7%) Query: 7 LDSLNDKQREAV-AAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L SLN Q +AV A+P L +LAG GSGKTRVL R+A+L+ SP I+AVTFTNK Sbjct: 14 LASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFTNK 73 Query: 66 AAAEMRHRIGQLMGTSQGGMWV-GTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 +A EMR R+ +L+G Q V GTFH + LR + NL +F I D+ED +++ Sbjct: 74 SANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLINLSNNFVIADAEDCKKIMS 133 Query: 125 RLIKAMN--LDEKQWPPRQAMWY--INSQKDEGLRPHHI--------QSYGNPVEQTWQK 172 ++K+ LDE ++ + I+ K +G P + ++ N + Sbjct: 134 GILKSRKAALDEASMSLKEGVVLSEISKAKAKGEPPEAMAIRAAQNKNAFTNTL-AVIAD 192 Query: 173 VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 +Y+ YQ A A +DF +LLL A L+ P ++++ R +ILVDEFQDTN QY Sbjct: 193 LYEEYQLALTEANSLDFDDLLLYALRLFKEAPRVVENIR----HILVDEFQDTNTTQYEL 248 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 ++ A V +VGD DQSIYGWR A++EN+ + DFPG E I LE+NYRST +IL A Sbjct: 249 LKRFAKAHKGVSVVGDPDQSIYGWRSAEIENLNKMTKDFPGVEAIYLEENYRSTGSILDA 308 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALA---E 349 A+A++ + R+ K L+T P++L + EA F+ IK G L + Sbjct: 309 AHAIVSQDRQRIQKSLFTSHPKSAPVTLKVFSTPVIEASFISTEIKRLIAYSGGLLRYDD 368 Query: 350 CAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFER 409 AIL R NA SRV+E +L + S+P RI GG +FFER EIKD L+YL+L N + AF R Sbjct: 369 FAILLRYNALSRVIESSLQKDSIPNRIVGGHKFFERMEIKDLLAYLQLADNPGFNPAFVR 428 Query: 410 VVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR----FMELI 465 VVN P R IGD+TL + T++ +++ Q C + + + +++ F+ +I Sbjct: 429 VVNVPKRSIGDKTLTDILSTAKSMKISPMQLCERVTDGEGIPANIKPGVKKSLANFVGVI 488 Query: 466 DAL------AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF 519 L AD+ + + ++V + LRT +R EN++ELV++ F Sbjct: 489 RKLRRAAEGGASVADL-IKMVIEKVNYEDYLRTSQPD-----WDSRWENVKELVSSPPTF 542 Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Query: 526 EDLMPLQAFLSHAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ 583 ++L PL FL + L + GQ D V +MT+H+AKGLE+P VFI +E+G FPS Sbjct: 689 DNLTPLAYFLQTSMLSTDTESGQDDASTPKVTIMTVHAAKGLEWPVVFIPAVEQGTFPS- 747 Query: 584 MSLDEGGRLEEERRLAYVGVTRA 606 E + EERRL YV +TRA Sbjct: 748 YRCTEPHEIAEERRLLYVAMTRA 770 >UniRef50_A8ZYJ7 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZYJ7_DESOH Length = 621 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 207/645 (32%), Positives = 341/645 (52%), Gaps = 50/645 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q++A +V+A GSGKTR ++ RI L++ P +I+ +TFT A Sbjct: 1 MSDLNPEQQKASEFTDGVCVVIAVPGSGKTRTMMERIGILVNKHGIPPENILGLTFTRNA 60 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMRHR+ ++G +++ T H + LLR+ + F+IL +Q+ +K + Sbjct: 61 ADEMRHRLVPVLGEMSSRVFLTTIHSFCYTLLRSEGIV------FEILSGREQMIFIKEV 114 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDE--GLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 IK + + ++ + I+ K+ G + G+ +Y+AY Sbjct: 115 IKKLKI--REVSAGMVLGEISLAKNNLIGCEEFRVMHAGDRTMVRIADIYEAYDREKSAR 172 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT--GK 242 L+DF +LL+R H++ N+ I + Y+E F ++LVDEFQDTN Q ++LL + G Sbjct: 173 MLMDFDDLLVRTHDMLNNRIDIREKYQEVFCHLLVDEFQDTNPAQMEILKLLIPENRQGS 232 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 GDD Q+I+ + GA V NI F + FP ++ + L NYRST IL+A LI +N Sbjct: 233 FWCTGDDHQAIFSFTGASVGNIIHFKSIFPDSQQMILHVNYRSTPQILAACQNLIRHNEK 292 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSR 361 ++ K L TD DGE + + + +E EA +V+ I+T +++ + A+LYR N QSR Sbjct: 293 QIHKTLKTDNPDGEEVIVLESSSEETEAINLVHEIQTLKESTDYDYQDMAVLYRCNFQSR 352 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND---DAAFERVVNTPTRGI 418 ++EE Q +PY I G+ F++R+E+K L YLR+I++ D A ++N P R I Sbjct: 353 IIEEVFSQHKIPYHIENGLCFYDRREVKILLDYLRVISSPETDEGDEALAGILNVPNRYI 412 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G + + +R + ++Q L++A +EL + AL F+ D L E H Sbjct: 413 GRKFIGELRSFAAEKQFHLYRALKELPVTLPYIRKNIQALTGFL---DPLISEAG----H 465 Query: 479 VQTDRVIKDSGLRT-------MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 ++ I S +RT + E++ +I+N+++L+ + ++ + Sbjct: 466 IRPAEAI--SLVRTSLDIDRYVSEEDMPSPDDVKIQNMDQLLLSAARYD---------DI 514 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 +AFL +AA E +D ++ V LMT+H AKGLEFP VF+VGM EG+ P++ Sbjct: 515 RAFLDYAAGFQNESVSDN-REGVSLMTIHKAKGLEFPVVFLVGMVEGILPTR----RNEN 569 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 +EEERR+ +V ++RAM L L++ T G+ R SRF+ E+ Sbjct: 570 IEEERRICFVAISRAMHLLYLSHYMT--CLGQAA--RTSRFLCEI 610 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 232/709 (32%), Positives = 350/709 (49%), Gaps = 85/709 (11%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ +ND+Q A+ AP + + VLAG GSGKTRVLV R+ L++ P I+ +TFTNKA Sbjct: 56 LEGMNDEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKA 115 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAH-HM--DANLPQDFQILDSEDQLRL 122 A EMR R+ +G + GTFH +A R+LR H H+ DF I D D + Sbjct: 116 AREMRERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSI 175 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKD--------EGLRPHHIQSYGNP-------V 166 +++++ + + D+K+ P A I++ K +G R P + Sbjct: 176 IRKIMVDVFMEDKKKADPALAKSRISAAKSAVDACVGMDGRRMARALCDTRPSLKRDPYI 235 Query: 167 EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN 226 + ++Y Y+ + +DF +LL A L YR+R+ ++LVDEFQDT+ Sbjct: 236 RDQFPRLYDEYEANLRSSNALDFDDLLSAAVALLRTSEEARLFYRQRWRHVLVDEFQDTS 295 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRS 285 QY IR LA +T +V +VGD DQ+IY WRGA+V NI+ +F +DF GA T+ L +NYRS Sbjct: 296 LSQYELIRALAAETARVFVVGDVDQAIYSWRGAEVANIRTKFDSDFAGAGTVLLTKNYRS 355 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T+ I+ AA A+I + R +L G+ +++ +E++EA F +G Sbjct: 356 TATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVVATEDEIEEADFAAREAARAARSGV 415 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 L + A+LYR+++QSR LEEA ++A +P+ + G F+ R+EIKD ++YLR++ N D Sbjct: 416 PLKDIAVLYRTHSQSRPLEEAFIRAGVPHVVVGDTAFYTRKEIKDLVAYLRVLFNSRDTV 475 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC------------------------ 441 + +R++NTP R IG TL+ +L W A Sbjct: 476 SLQRIINTPPRKIGPGTLE---------KLEAWAAGLPWVDGMPQPLGMALLDRTWSTPD 526 Query: 442 -RELLQEKA---LAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE 497 +LL A LA A A+ F+ ++ L + T+ V++ G Sbjct: 527 QDDLLPPAADMGLAAGAYKAVSGFVSVMRELGEAVEVSDPGALTEEVVRRIGFEEYVADM 586 Query: 498 KGEKGQTRIENLEELVTATRQFSYNE---------------------EDEDLMPLQAFLS 536 E G R+ ++ELV+ S E + L FL Sbjct: 587 --ENGDERVGYVKELVSIASDPSAVESLDGVDGGGAAGGGDNGATKRKSTGHAGLGEFLE 644 Query: 537 HAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM--SLDEGGRL 592 +L A D DAV+LMTLH+AKGLEF V I G E+ + P + + + Sbjct: 645 GISLLMSAETRSEDEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDASSDAAEH 704 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +EE RL YVG+TRA +KL L A R+ +G+ VY PS F+ + E V Sbjct: 705 DEEVRLFYVGLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLV 753 >UniRef50_A6RX56 Putative uncharacterized protein n=2 Tax=Sclerotiniaceae RepID=A6RX56_BOTFB Length = 999 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 215/650 (33%), Positives = 346/650 (53%), Gaps = 50/650 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + LL LN Q+ AV++ + L +LAG GSGKT L R AWL+ + P +I+ Sbjct: 1 MTIDSLLRGLNASQKAAVSSQANTLAILAGPGSGKTHTLTSRTAWLLQ-QGLQPCNIIVA 59 Query: 61 TFTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFT KAA EM+ RIG+L+G + + +GTFH +A L + + + F I DS D Sbjct: 60 TFTVKAAREMKERIGKLIGNGLESKLILGTFHRIARIYLAQYGHLIGIRKGFGIADSNDS 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVE-QTWQKVYQA 176 L ++KR++K +L+ P+ A I+S K +G ++ V+ Q ++ V+ Sbjct: 120 LAIIKRIVKRKDLN---IDPKVARSRISSLKAKGSASASKVPEAKKKTVDTQEFEIVHAE 176 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ + + L+D+ +LL+R EL P + + +L+DEFQDTN +Q+ +RL Sbjct: 177 YQATLELSNLLDYDDLLVRCVELLRLYPSCVANIEA----VLIDEFQDTNLVQFDLMRLF 232 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A ++ IVGD DQSIY +R A+++N +R + +P TI LE+NYRS+ IL A + Sbjct: 233 AVSQKRITIVGDPDQSIYSFRAAEIKNYKRMITQYPDTVTISLEENYRSSGAILLTALNV 292 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAEC---AIL 353 IE ++ R+ K L G L EA +++ I+ G L + AIL Sbjct: 293 IEQDSSRIAKSLLPTHVVGTRPVLRKLATAQKEADWIIQEIQRIMGMTGDLLDLNDFAIL 352 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 RS+A SR++E +L +A + YR+ GG+RF++R EIK L YLR+I + + A R++NT Sbjct: 353 IRSSALSRIIESSLGKAGIAYRMVGGLRFYDRIEIKTLLDYLRVINLPDHNDALARIINT 412 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-EKALAGRAASALQR----FMELIDAL 468 P+R IG+ T+ + + + +LTLW + +Q +A + ++++R F+++I Sbjct: 413 PSRRIGEVTIKALLEEAEQSKLTLWSLILKSVQGRRATKTKLTASVERNLSVFVDIILTG 472 Query: 469 AQETADMPLHVQT------DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--- 519 ++ AD P + + + +I+ + T E+ +G+ + + +N++EL+T F Sbjct: 473 MKKVAD-PSNTENSIVKIMEFIIEKTSYETWLEEHRGDITKAQWDNVKELMTQATDFQEL 531 Query: 520 -SYNEEDEDLM------------PLQAFLSHAALEA---GEGQADTWQDAVQLMTLHSAK 563 S EDE L L FL++ AL + E V + T+H+AK Sbjct: 532 ISNGYEDESLPQIDGLKQEDASDSLSRFLANVALASEVTKEEDKTNNTPQVTISTIHAAK 591 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLT 613 GLE+P VFI G +G P + D +EERRL YV +TRA L ++ Sbjct: 592 GLEWPIVFIPGAYQGSIPHSRAEDT----DEERRLLYVAMTRAKALLNMS 637 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 1097 0.0 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 912 0.0 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 906 0.0 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 902 0.0 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 899 0.0 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 894 0.0 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 889 0.0 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 888 0.0 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 884 0.0 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 883 0.0 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 879 0.0 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 873 0.0 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 870 0.0 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 869 0.0 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 868 0.0 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 867 0.0 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 867 0.0 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 862 0.0 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 861 0.0 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 859 0.0 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 857 0.0 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 852 0.0 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 851 0.0 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 851 0.0 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 849 0.0 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 849 0.0 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 848 0.0 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 847 0.0 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 846 0.0 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 846 0.0 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 845 0.0 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 842 0.0 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 841 0.0 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 840 0.0 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 838 0.0 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 838 0.0 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 838 0.0 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 837 0.0 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 837 0.0 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 836 0.0 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 835 0.0 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 833 0.0 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 831 0.0 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 830 0.0 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 830 0.0 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 829 0.0 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 828 0.0 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 827 0.0 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 827 0.0 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 826 0.0 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 824 0.0 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 823 0.0 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 822 0.0 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 821 0.0 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 819 0.0 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 817 0.0 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 815 0.0 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 815 0.0 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 815 0.0 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 815 0.0 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 815 0.0 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 813 0.0 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 813 0.0 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 813 0.0 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 810 0.0 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 810 0.0 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 810 0.0 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 809 0.0 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 808 0.0 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 805 0.0 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 805 0.0 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 805 0.0 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 803 0.0 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 803 0.0 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 803 0.0 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 802 0.0 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 801 0.0 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 800 0.0 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 800 0.0 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 799 0.0 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 798 0.0 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 798 0.0 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 797 0.0 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 797 0.0 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 797 0.0 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 794 0.0 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 792 0.0 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 792 0.0 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 792 0.0 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 791 0.0 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 791 0.0 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 790 0.0 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 790 0.0 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 789 0.0 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 789 0.0 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 787 0.0 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 787 0.0 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 787 0.0 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 785 0.0 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 783 0.0 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 783 0.0 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 781 0.0 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 777 0.0 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 777 0.0 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 775 0.0 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 775 0.0 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 775 0.0 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 775 0.0 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 771 0.0 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 771 0.0 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 767 0.0 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 766 0.0 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 766 0.0 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 765 0.0 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 762 0.0 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 759 0.0 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 759 0.0 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 758 0.0 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 758 0.0 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 757 0.0 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 756 0.0 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 755 0.0 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 755 0.0 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 753 0.0 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 751 0.0 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 749 0.0 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 748 0.0 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 745 0.0 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 745 0.0 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 744 0.0 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 743 0.0 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 743 0.0 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 743 0.0 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 742 0.0 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 741 0.0 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 738 0.0 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 738 0.0 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 737 0.0 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 735 0.0 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 734 0.0 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 733 0.0 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 733 0.0 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 730 0.0 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 730 0.0 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 729 0.0 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 728 0.0 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 726 0.0 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 725 0.0 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 724 0.0 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 723 0.0 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 721 0.0 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 720 0.0 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 718 0.0 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 718 0.0 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 717 0.0 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 715 0.0 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 714 0.0 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 713 0.0 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 712 0.0 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 711 0.0 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 710 0.0 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 710 0.0 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 708 0.0 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 705 0.0 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 704 0.0 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 703 0.0 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 703 0.0 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 702 0.0 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 698 0.0 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 697 0.0 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 696 0.0 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 696 0.0 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 695 0.0 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 694 0.0 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 693 0.0 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 693 0.0 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 692 0.0 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 692 0.0 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 690 0.0 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 690 0.0 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 689 0.0 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 688 0.0 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 688 0.0 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 686 0.0 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 684 0.0 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 683 0.0 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 683 0.0 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 683 0.0 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 680 0.0 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 677 0.0 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 676 0.0 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 676 0.0 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 675 0.0 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 675 0.0 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 674 0.0 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 674 0.0 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 673 0.0 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 672 0.0 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 671 0.0 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 671 0.0 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 669 0.0 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 668 0.0 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 667 0.0 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 666 0.0 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 665 0.0 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 664 0.0 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 664 0.0 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 664 0.0 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 663 0.0 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 663 0.0 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 661 0.0 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 659 0.0 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 657 0.0 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 654 0.0 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 653 0.0 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 653 0.0 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 649 0.0 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 648 0.0 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 647 0.0 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 646 0.0 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 646 0.0 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 645 0.0 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 643 0.0 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 640 0.0 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 637 0.0 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 633 e-180 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 633 e-179 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 632 e-179 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 630 e-179 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 630 e-179 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 628 e-178 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 628 e-178 UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=So... 628 e-178 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 627 e-178 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 627 e-178 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 625 e-177 UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase Pcr... 625 e-177 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 624 e-177 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 619 e-175 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 619 e-175 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 619 e-175 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 618 e-175 UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria Re... 615 e-174 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 614 e-174 UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung)... 613 e-174 UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificac... 612 e-173 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 607 e-172 UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophi... 605 e-171 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 604 e-171 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 604 e-171 Sequences not found previously or not previously below threshold: >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 1097 bits (2837), Expect = 0.0, Method: Composition-based stats. Identities = 720/720 (100%), Positives = 720/720 (100%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV Sbjct: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL Sbjct: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA Sbjct: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT Sbjct: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN Sbjct: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS Sbjct: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ Sbjct: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL Sbjct: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY Sbjct: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG Sbjct: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV Sbjct: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 912 bits (2357), Expect = 0.0, Method: Composition-based stats. Identities = 406/741 (54%), Positives = 545/741 (73%), Gaps = 23/741 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+S++L+ LND QR+AV + L+LAGAGSGKTRVLVHRIAWL V S Y+I+AV Sbjct: 1 MDISHILNDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA+EMR R+ L+G GM +GTFHG+A+RLLR H+ + LPQ FQILDS+DQ Sbjct: 61 TFTNKAASEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQK 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KRL+KA+ LD+ QWP +Q +IN +K+EG RPHHI NP + ++YQAY+E Sbjct: 121 RVIKRLLKALELDDAQWPHKQVQAFINGEKEEGRRPHHIDPGHNPYVRQMVQIYQAYEEQ 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C RAGLVDFAELLLRAHELWL P +L HY+ RF +ILVDEFQDTN++QYAW+R+LAG + Sbjct: 181 CKRAGLVDFAELLLRAHELWLKNPQVLAHYQARFRHILVDEFQDTNSLQYAWLRVLAGAS 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 G++ IVGDDDQSIYGWRGA++ENI+RF DF +T+RLEQNYRST IL AAN LI N Sbjct: 241 GRLFIVGDDDQSIYGWRGAKIENIRRFDEDFSDVKTVRLEQNYRSTGTILKAANGLIAFN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R+GK LW+ G +G+PI +Y AFNELDEAR+V N++++W + GG+ +E A+LYRSNAQS Sbjct: 301 QDRMGKNLWSAGEEGDPIRIYEAFNELDEARYVCNQVESWCEQGGSRSEVAVLYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+E+ALLQA +PYR+YGG+RF++R EIKD L+YLRL+ N DDAAFERV N P RGIG+ Sbjct: 361 RVMEQALLQAQIPYRVYGGLRFYDRAEIKDVLAYLRLLVNTEDDAAFERVYNHPPRGIGN 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +T D +R+ +R ++++LWQA ++ Q+ L RA +A+ F+ LI++L TA++ L Q Sbjct: 421 KTADQIREVARMQEISLWQAATQMAQD-GLTARAKTAVNGFLSLIESLKDSTAELTLQDQ 479 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM----------- 529 +VI SGL+ +E++ E+GQ+R+ENL+EL+ A F ++++ + Sbjct: 480 VIQVISRSGLQLHFEKDTSEQGQSRLENLDELINAVSVFKPVQDNDTVEGVVPEEAAMTE 539 Query: 530 ---------PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 PL FL+ AALEAGE QAD W+ +VQLMTLH+AKGLEFP VF++G+EEG+F Sbjct: 540 AFDQPNFENPLAEFLAQAALEAGEQQADQWESSVQLMTLHAAKGLEFPLVFMIGLEEGLF 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 PSQ S ++ RLEEERRLAYVG+TRA ++L +++A RR++G E Y PSRFI E+P++C Sbjct: 600 PSQQSQEDPYRLEEERRLAYVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDC 659 Query: 641 VEEVRLRATVSRPVSHQRMGTPMV--ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 V+ VRL +V N+SG+++G+ V H KFGEGT++ EG+G+H+R+ Sbjct: 660 VQMVRLSGSVKHYGETASHANKGFALPNESGFRVGENVFHQKFGEGTVLGTEGAGDHARI 719 Query: 699 QVAFQGQGIKWLVAAYARLES 719 QV F G KWLVAA+A+LE Sbjct: 720 QVNFTHAGTKWLVAAFAKLEK 740 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 906 bits (2342), Expect = 0.0, Method: Composition-based stats. Identities = 417/727 (57%), Positives = 531/727 (73%), Gaps = 13/727 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L LND QREAV P LVLAGAGSGKTRVL R A+L+ VE SP++I+AV Sbjct: 1 MPIDALTADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RIG+L+G + GMWVGTFHG+AHRLLR H A LP+ FQILD++DQL Sbjct: 61 TFTNKAAGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQILDADDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KR+++A DE ++PPRQ +I+++K+EG RP + G +Q VY Y++A Sbjct: 121 RVVKRVLRARGNDESRFPPRQVRGFISARKEEGERPSDVTEAGGDYQQELLAVYHDYEQA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C R GLVDF+ELLLRA+EL + P +L HY+ RF +ILVDEFQDTN +QY W++LL G+ Sbjct: 181 CRRGGLVDFSELLLRAYELLRDDPELLGHYQRRFAHILVDEFQDTNALQYRWLKLLGGEQ 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGA+VENI+ F + +RLEQNYRST IL AAN LIE+N Sbjct: 241 SELFVVGDDDQSIYGWRGARVENIEHFRREMGDVRVVRLEQNYRSTGTILDAANRLIEHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQ 359 +GRLGK+LWTDG GEPI+LY AFNE+DEAR+VV+RI+ + GG A+ AILYRSNAQ Sbjct: 301 SGRLGKQLWTDGWSGEPITLYAAFNEVDEARWVVDRIRQLSEEGGYGHADFAILYRSNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE L A +P+R+YGG+RFFER E+KDAL+YLRL+ANR+DDA+FERVVNTP RGIG Sbjct: 361 SRALEHELHAARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDDASFERVVNTPPRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 +T+D VR +R+ +++W+A REL +ALA RA +AL F+E IDAL E D PLH Sbjct: 421 AKTVDAVRYAAREADVSMWRAARELTGSRALAARARNALASFLERIDALDSELTDRPLHD 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMPLQAFLSHA 538 Q ++VI + LR +E++ + R+ENL+ELVTA R F+ +E ++DL PL AFL+HA Sbjct: 481 QVEQVIARTDLRRHHERD-----EARLENLDELVTAARTFAQRDEPEDDLDPLAAFLTHA 535 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 ALEAGEGQAD W+ +VQLMTLHSAKGLEFP VF+VGMEEG+FP +MS++E GRLEEERRL Sbjct: 536 ALEAGEGQADDWEHSVQLMTLHSAKGLEFPVVFLVGMEEGLFPHRMSVEEPGRLEEERRL 595 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR------ 652 YVG+TRA Q+L LT+AE RRL+G + RPSRF+ E+P E +EEVR R +V R Sbjct: 596 CYVGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRPRMSVRRGPPSVP 655 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 P G LG RV H +FG+G +++ EGSG ++RLQV F G KWL+A Sbjct: 656 ASGGSGSSLPADAPPEGLSLGSRVHHPRFGDGVLLHCEGSGPNARLQVRFDSAGTKWLIA 715 Query: 713 AYARLES 719 A LE Sbjct: 716 GRAGLEP 722 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 295/730 (40%), Positives = 422/730 (57%), Gaps = 15/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + +L LN Q EAV LL+LAGAGSGKTRVL HRIA L+ E SP++I+A+TF Sbjct: 10 LDEILAGLNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITF 69 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ ++ +WV TFH ++LR QDF + D D+ L Sbjct: 70 TNKAALEMRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTL 129 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEAC 181 +K IK +N+D+K + P+ I+ K++ + + + Q +Y+ YQ+ Sbjct: 130 IKDCIKELNIDDKTFSPQYVSSIISKAKNKLIDEDKYDREADNILTQKAAGIYKLYQKKL 189 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 VDF +LL L+ P++L+ Y+ +F ILVDE+QDTN +QY +++LA + Sbjct: 190 KTYNAVDFDDLLFLVVRLFKEHPNVLERYQHKFRYILVDEYQDTNYVQYLLVKMLAQKSR 249 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQ IYGWRGA ++NI F D+P A + LEQNYRST NIL AAN +I N Sbjct: 250 NLCVVGDPDQGIYGWRGADIQNILSFERDYPEACVVTLEQNYRSTQNILDAANHIISYNQ 309 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQS 360 GR K+LWTD G PI + + +E EAR VV +IK G + +ECA+LYR++AQS Sbjct: 310 GRKEKRLWTDAGKGSPIIVCKSRDEFAEARHVVEQIKHLHLVEGVSYSECAVLYRTHAQS 369 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEE +L+ +PY I GG+RF+ER+EIKD ++YLR+I N D+ + R++N P RGIGD Sbjct: 370 RVLEEIMLRYGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVPRRGIGD 429 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +L + + + + A Q L G+A L+ ++ +P+ Sbjct: 430 VSLTKIFAFAAEAGIPAGLAMEMAEQIPGLNGKARKQAALLGSLLQVWRRQQEFLPVTDL 489 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T +++ +G R E E + +TR+ENLEE ++ TR + + L FLS +L Sbjct: 490 TVDILERTGYRQELEYEGTVEARTRLENLEEFLSVTRLYDLETVEG---TLGEFLSELSL 546 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + + + V +MTLH+AKGLEFP VF+V MEEG+FP +L + G LEEERRLAY Sbjct: 547 VTDADRDNGEAERVNMMTLHTAKGLEFPFVFLVAMEEGIFPHNRALSDAGELEEERRLAY 606 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV-------EEVRLRATVSRP 653 VG+TRA QKL L+Y+ R +YG Y RPSRF+ E+P + V E ++ V + Sbjct: 607 VGMTRARQKLYLSYSFQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEERQKINTQVKKQ 666 Query: 654 VSHQRMGTPMVENDS---GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 + V+ + + LG +V HAK+G G IV + G G ++ LQVAF G+K L Sbjct: 667 QETSKRNQTTVKKPAAGQNFVLGDKVHHAKWGTGVIVGVSGLGSNAVLQVAFPDMGVKSL 726 Query: 711 VAAYARLESV 720 A YA LE + Sbjct: 727 SAGYAPLEKI 736 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 899 bits (2325), Expect = 0.0, Method: Composition-based stats. Identities = 292/730 (40%), Positives = 431/730 (59%), Gaps = 18/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ + LN Q+EAV + LLVLAGAGSGKTRVL +R+A L+ P +I+AVTF Sbjct: 4 LADFMALLNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQE-GVRPENILAVTF 62 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ L+G + G+WV TFH R+LR +F I D++DQ Sbjct: 63 TNKAAQEMKERLEGLVGEAARGLWVSTFHSACVRILRREAHLLGYRPNFVIYDTDDQQAA 122 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEAC 181 LK ++K ++LD+K++PPR I+ K++ P EQ ++Y+ YQE Sbjct: 123 LKEVLKELDLDDKKYPPRSLAQVISMAKNDLKTPERFLDGAATFREQQQGQIYRRYQEKL 182 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +L+++ LW P +L++Y++R+ +ILVDE+QDTN+ QY +RLLAG Sbjct: 183 RELNAMDFDDLIMQTVFLWQQNPLVLRYYQQRWQHILVDEYQDTNHAQYILVRLLAGKGD 242 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQ IYGWRGA + NI F DFP A I LE+NYRST IL AANA+I++N Sbjct: 243 NLCVVGDPDQGIYGWRGADIGNILAFEEDFPRARVILLEENYRSTRPILQAANAVIQHNE 302 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 GR K+LWT +GE + LY A +E DE RF+ + + Q G ++ A+LYR++AQS Sbjct: 303 GRREKRLWTRRREGELLHLYRATDERDEGRFIAGEVYRRHQQEGRPFSDFAVLYRTHAQS 362 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEA +QA +PY I GG++F++R+EIKD L+YLR+IAN +D + R++N P RGIG+ Sbjct: 363 RALEEAFIQAGVPYEIVGGLKFYQRKEIKDILAYLRVIANPDDSLSLLRIINVPRRGIGE 422 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 TL + + +L++ + + R AL+ +E++D L Q+ + + Sbjct: 423 ATLARLEAAATSEGESLYRVLERVDTIPGIPARGRQALRELVEMLDNLRQQQEKITVTDL 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +++++G + E E+ + Q R+ENL+E T TR + + L FL+ AL Sbjct: 483 VATILQETGYQAELEAERTPEAQARLENLKEFQTVTRSYDQGAPES---SLGDFLTQVAL 539 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + AV LMT+H+AKGLEFP VF+ G+EEG+FP SLD+ +EEERRL Y Sbjct: 540 VAESDTY-SGNAAVALMTMHTAKGLEFPVVFLAGLEEGVFPHFRSLDDPAEMEEERRLCY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-----------EVRLRAT 649 VG+TRA + L LT+A TR LYG + + PSRF+ E+P + ++ Sbjct: 599 VGMTRAREVLYLTHAWTRNLYGSTMSNPPSRFLDEIPADLIQGEGTGLRSGVLSRTSEER 658 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 R S +R P + +++G +V+H +G G IV + G G+ + + VAF G+GIK Sbjct: 659 DDRGRSTRRQPAPARSTRASWQVGDKVQHDAWGLGVIVKISGEGDDAIISVAFPGRGIKQ 718 Query: 710 LVAAYARLES 719 L YA + Sbjct: 719 LALRYAPIRK 728 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 894 bits (2311), Expect = 0.0, Method: Composition-based stats. Identities = 287/728 (39%), Positives = 443/728 (60%), Gaps = 14/728 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ L+ ++N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+I+A+TF Sbjct: 1 MNALVKNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ L+G +W+ TFH + R+LR + ++F I+D DQ + Sbjct: 61 TNKAAKEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEAC 181 +K ++K+ N+D K++ PR + I++ K+E P Q N Q VY+ YQ Sbjct: 121 IKDVLKSENIDSKRFEPRMFIGAISNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R +DF +L++ L+ P L++Y+ +F I VDE+QDTN QY ++LLA Sbjct: 181 SRNEALDFDDLIMTTINLFERVPETLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLANKFK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIYGWRGA ++NI F D+P A+TI LEQNYRST NIL+AAN +I++N+ Sbjct: 241 NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKHNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT + G+ I Y A E DEA +VV I Q +G +E AILYR+NAQSR Sbjct: 301 ERKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMKHQRSGKKYSEMAILYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEE +++++PY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RGIG Sbjct: 361 VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVPKRGIGPS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 +++ ++ + ++++ A E+ L+ + F E+I L +E + + Sbjct: 421 SVEKIQTYALQNNISMFDALAEVDFI-GLSKKVTQECISFYEMIQNLIKEQEFLEISEIV 479 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D V++ SG R M ++E+ + ++R+ENL+E ++ + + N E+ L FL+ +L Sbjct: 480 DEVLQKSGYRDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEE-QSLINFLTDLSLV 538 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLA 599 A +ADT Q+ V LMT+HSAKGLEFP VFI+GMEE +FP ++ ++ +EEERR+ Sbjct: 539 ADIDEADT-QNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMEEERRIC 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------VRLRATVS 651 YV +TRA + L +T A TR L+G+ + PSRF+ E+PE+ ++ + ++ Sbjct: 598 YVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPK 657 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R S + T + S +K+G +V H +GEG + N+ L + F+ +G K L+ Sbjct: 658 RGFSKRTTSTKKQVSSSDWKVGDKVMHKAWGEGMVSNVNEKNGSVELDIIFKSEGPKRLL 717 Query: 712 AAYARLES 719 A +A + Sbjct: 718 AQFAPITK 725 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 889 bits (2297), Expect = 0.0, Method: Composition-based stats. Identities = 290/730 (39%), Positives = 439/730 (60%), Gaps = 16/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LL+ +N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+++A+TF Sbjct: 1 MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ +L+G +W+ TFH + R+LR + ++F I+D DQ + Sbjct: 61 TNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 +K ++K N+D K++ PR + I++ K+E P Q + Q VY YQ Sbjct: 121 IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R +DF +L++ L+ P +L++Y+ +F I VDE+QDTN QY ++LLA Sbjct: 181 SRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIYGWRGA ++NI F D+P A TI LEQNYRST IL+AAN +I+NN+ Sbjct: 241 NLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT +GE I Y A E DEA FV+ I Q NG + AILYR+NAQSR Sbjct: 301 ERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEE ++++MPY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RG+G Sbjct: 361 VLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 +++ V+ + ++++ A E L+ + F ELI +L +E + +H Sbjct: 421 SVEKVQNYALQNNISMFDALGEADFI-GLSKKVTQECLNFYELIQSLIKEQEFLEIHEIV 479 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D V++ SG R M E+E + ++R+EN++E ++ + + N E+ L FL+ +L Sbjct: 480 DEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEE-QSLINFLTDLSLV 538 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLA 599 A +ADT ++ V LMT+HSAKGLEFP VFI+GMEE +FP ++ G ++EERR+ Sbjct: 539 ADIDEADT-ENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEGDHEMQEERRIC 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------EVRLRAT 649 YV +TRA + L +T+A +R L+G+ + PSRF+ E+PE +E + + + Sbjct: 598 YVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPF 657 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 R S + T + S + +G +V H +GEG + N+ L + F+ QG K Sbjct: 658 AKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKR 717 Query: 710 LVAAYARLES 719 L+A +A +E Sbjct: 718 LLAQFAPIEK 727 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 888 bits (2296), Expect = 0.0, Method: Composition-based stats. Identities = 293/716 (40%), Positives = 413/716 (57%), Gaps = 11/716 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN Q EAV P LLVLAGAGSGKTRVL RIA+L+ V P+ I+A+TFTN+ Sbjct: 9 FLTELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTNR 68 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+ + +WV TFH R+LR ++F I D DQ ++K Sbjct: 69 AAREMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIKD 128 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRA 184 +K +NL+ +Q PP I+ QK+ + P + ++ +VY AYQ +R Sbjct: 129 CLKELNLEPRQHPPAMFSAAISWQKNALVGPAEFAGAAYDQHQELTARVYAAYQARLERN 188 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL A L+ P +L+ YR RF ++LVDE+QDTN+ QY + LLA + Sbjct: 189 NALDFDDLLFLAVRLFREFPPVLEQYRRRFLHLLVDEYQDTNHAQYVLVNLLAQTHRNLT 248 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ IYGWRGA + NI F D+P A ++LEQNYRST IL AAN +I N R Sbjct: 249 VVGDPDQCIYGWRGADLRNILNFERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHRK 308 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+LWT GE L+ A +E EARFV I+ + G + + A+ YR++AQSRVLE Sbjct: 309 EKELWTARGAGEAPVLHQARDERAEARFVAREIRRLRAQGRSYRDFAVFYRTHAQSRVLE 368 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 + LL+ +PY I GG++F++R+EIKD L+YL+LI N +DD A R++N P RG+G +L Sbjct: 369 DELLRHGVPYTIIGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVPRRGVGKASLV 428 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 R+ + A RE + + L+ A+ E + + + + T++V Sbjct: 429 KFFAYVRESSVACADALREADRIRGLSAGVREAMGALGEQLARWRER--EGGVTGLTEQV 486 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 +++SG T E E+ + +TR+ENL E ++ TR+F L FL+ AL Sbjct: 487 LEESGYLTALEAERTVEARTRMENLSEFLSVTREFDLQRGG----TLAEFLNDLALYTDL 542 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + D V LMTLHSAKGLEFP VF+ GMEEG+FP + E +EEERRL YVG+T Sbjct: 543 DRFDGESSQVTLMTLHSAKGLEFPVVFLTGMEEGVFPHTRAFSEPVEMEEERRLCYVGIT 602 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RA ++L LT AE+R LYG Y PSRF+ E+P E A + + +R T Sbjct: 603 RARERLFLTLAESRLLYGNVYYGVPSRFLREIPPELFAGGEPEAGAAAEQAAERPETGRA 662 Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 E ++ G RV H K+GEG +V +G+G ++++VAF QG+K L+ YA LE + Sbjct: 663 E----FRPGDRVWHGKWGEGMVVQTDGTGLDAQVKVAFPDQGVKTLMVRYAPLELL 714 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 295/759 (38%), Positives = 419/759 (55%), Gaps = 44/759 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN +QR AV LL++AGAGSGKTRVL HRIA+L++ + P I+A+TFTNK Sbjct: 10 LLDGLNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAITFTNK 69 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ L+G G MWV TFH R+LR P +F I D+ D RL+ Sbjct: 70 AAGEMRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQRLMAL 129 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRA 184 + + ++LD +++PP+ +++ K+E + ++ + +EQ + Y+ YQ +A Sbjct: 130 VCRELDLDPRRYPPKSFSAQVSNLKNELIDYEAFKARASTHLEQKLAEAYEMYQARLQQA 189 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG--- 241 G +DF +L++ L P +HYR RF +ILVDE+QDTN+ QY +RLL G Sbjct: 190 GAMDFDDLIMTTVHLLQAFPEAAEHYRRRFRHILVDEYQDTNHAQYELVRLLTESPGEDV 249 Query: 242 ---KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 ++ +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST ILSAANA+IE Sbjct: 250 GPAELCVVGDADQSIYAFRGATIRNILEFERDFPDATTILLEQNYRSTQTILSAANAVIE 309 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSN 357 N R K+LW+D +GE I Y A NE DEA FV + D G A + A+ YR+N Sbjct: 310 RNAHRKPKRLWSDQGEGEKIVGYVADNEHDEAAFVAAEVDRLTDAGLARPGDVAVFYRTN 369 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV EE ++ +PY++ GG+RF+ER+E++D L+YLR++AN D + R++N P RG Sbjct: 370 AQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNVPRRG 429 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGDR V + ++T W+A R Q +A R+A A++ F+ L+D L + A Sbjct: 430 IGDRAEACVEAHAARERITFWEALRTPEQVPGMAPRSAKAVREFVALMDDLRERAATATP 489 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP------- 530 + V+ ++G + + + +TRIENL EL R+F + Sbjct: 490 AELIEAVLTETGYLAELQNSRDPQDETRIENLRELEAVAREFEDRLAERVPAAEEEEEEA 549 Query: 531 -------LQAFLSHAALEAGEG---------------QADTWQDAVQLMTLHSAKGLEFP 568 L FL +L A + Q V LMTLH+AKGLEFP Sbjct: 550 PSGAAGRLVDFLEQISLVADADAIPGTKGAPIPPGERAPEDEQGVVTLMTLHTAKGLEFP 609 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VF+ GME+G+FP ++ LEEERRLAYVG+TRA Q+L LT A R +G + Sbjct: 610 VVFLTGMEDGVFPHLRAMSNPQELEEERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNP 669 Query: 629 PSRFIGELPEECVEEVRLRA------TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG 682 SRF+ E+P V+ R A + + + G +V H FG Sbjct: 670 ASRFLSEVPSSLVKWEREAAMPAPGSLTAMAAARPAARSASARAVPALSPGDKVTHDSFG 729 Query: 683 EGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYARLESV 720 GT+++++G+G+ + + F G G+K LV YA LE + Sbjct: 730 LGTVISVDGTGDKTAASIDFGGTHGVKRLVLRYAPLEKL 768 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 883 bits (2282), Expect = 0.0, Method: Composition-based stats. Identities = 305/725 (42%), Positives = 431/725 (59%), Gaps = 24/725 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LN Q+ AV +LVLAGAGSGKTRVL HRIA+L+ + SPY I+A+TFTNKAA Sbjct: 21 TLNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITFTNKAAK 80 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM+ R+ L+G +WV TFH R+LR ++F I D+ DQ L+K +K Sbjct: 81 EMKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIYDTTDQQVLMKDCLK 140 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPV-EQTWQKVYQAYQEACDRAGL 186 NLDEK + PR + I KD + P +++ +GN Q ++Y+ YQ+ Sbjct: 141 KFNLDEKLFQPRMILNEIGRAKDLLIGPNEYLEEFGNDFRNQKIAEIYRLYQDRMKSNNA 200 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L+++ +L+ P +L++Y+ +F ILVDEFQDTN QY I LLA G + +V Sbjct: 201 LDFDDLIMKTVQLFQTHPTVLRYYQNKFKYILVDEFQDTNMAQYTLISLLAKSHGNLCVV 260 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA + NI F DFP + ++LEQNYRST +IL AAN ++ NN R K Sbjct: 261 GDDDQSIYGWRGADIRNILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSK 320 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEE 365 KLWTD DGE I Y A NE DEA F+ I+ + +E AILYR+NAQSR LEE Sbjct: 321 KLWTDNQDGEIIQYYRANNEYDEASFISGTIEKLNEEENRPYSEFAILYRTNAQSRALEE 380 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L++ ++PY+IY G RF++R+EIKD L+YLR I N DD + +R++N P RGIG +++D Sbjct: 381 MLMKRAIPYKIYSGTRFYDRKEIKDILAYLRTIENPVDDVSVKRIINVPKRGIGIKSIDR 440 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + + + A + Q + R +F ELI +L +M + + Sbjct: 441 FDEYAEGKNESFFGALLHVDQMPDQSTRVKVQTNKFTELIQSLRDRQDEMSVTDIVKEIY 500 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 + +G E + ++RIENL+E ++ T+ F N E + L+ FL+ +LE Sbjct: 501 EKTGYIDALMAEDKIEAESRIENLQEFLSVTKDFDENSE---VKTLEEFLARTSLETTLD 557 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 + D ++ V LMTLHSAKGLEFP VFI GMEE +FPS MSL E LEEERRL YVG+TR Sbjct: 558 ENDE-ENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQE-NNLEEERRLCYVGITR 615 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------------EVRLRATVSRP 653 A +KL +++A TR LYG+ + SRF+GE+PEE ++ E++ + Sbjct: 616 AREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRKRDLKEMQTSPLFTGA 675 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + HQ+ G N K G +V+H KFG GT+V++ G L +AF GIK + + Sbjct: 676 MMHQKKGNANSINSDAIKAGNKVKHPKFGVGTVVSVAGE----MLTIAFPNSGIKKIAST 731 Query: 714 YARLE 718 + +LE Sbjct: 732 FIQLE 736 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 879 bits (2273), Expect = 0.0, Method: Composition-based stats. Identities = 303/753 (40%), Positives = 456/753 (60%), Gaps = 43/753 (5%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 +ND+Q+EAV + LL++AGAGSGKTRVL HR+A++++ E P++I+A+TFTNKAA E Sbjct: 1 MNDRQKEAVQHTQGPLLIMAGAGSGKTRVLTHRMAYILAEEEVHPWNILAITFTNKAARE 60 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ R+ QL+G MWV TFH + R+LR + F I D +Q +KR++K Sbjct: 61 MKERVSQLVGPQAEDMWVSTFHSMCVRILRRDIELLGYQRSFTICDPSEQQTAMKRILKK 120 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 +++D +++ R + I+ K++ + Y VEQ K Y+ YQ+ ++ +D Sbjct: 121 LDIDSEKYDYRMILNRISQAKNDLEDVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLD 180 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +L++ +L+ P LQ+Y+++F I VDE+QDTN+ QY + +LA + +VGD Sbjct: 181 FDDLIMLTVQLFQKHPETLQYYQQKFQYIHVDEYQDTNHAQYRLVTMLAKKFKNICVVGD 240 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DQSIYGWRGA + NI F D+ A+ + LEQNYRST IL AAN +IENN R KKL Sbjct: 241 ADQSIYGWRGADMSNILEFEKDYQNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKL 300 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALL 368 WT+ +G+PI+ Y A +E DE R+V+++I++ +G + AILYR+NAQSRV+EE LL Sbjct: 301 WTENEEGQPITYYRAQSEQDEGRYVLSQIQSLLRDGYHYDDFAILYRTNAQSRVMEENLL 360 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 ++++P+R+ GG RFFER EIKD L+YLRLI N DD +F R+VN+P RGIG +LD + Sbjct: 361 KSNIPFRLVGGQRFFERLEIKDLLAYLRLIVNPQDDLSFRRIVNSPKRGIGATSLDKLND 420 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDS 488 + Q +L +A ++ L+G+AA AL++F E+I+ L + + + ++VI+ + Sbjct: 421 FASMHQFSLLEASSQI-AISPLSGKAAKALEKFAEMIEDLRKMQEFLSISEFVEQVIEKT 479 Query: 489 GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN--EEDEDLMPLQAFLSHAALEAGEGQ 546 G EQ+ + RIEN++E ++ +QF + EE+ + PL FL+ +L + Sbjct: 480 GYLAALEQQHTMEADARIENIQEFISVAKQFEQDRLEEESEDSPLLQFLTDLSLVSDADS 539 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-DEGGRLEEERRLAYVGVTR 605 D V LMTLH+AKGLEFP VFI+G+EEG+FPS S+ + G +EEERRLAYVG+TR Sbjct: 540 DDGDGRMVTLMTLHAAKGLEFPVVFIIGLEEGIFPSLRSIMENGDDVEEERRLAYVGITR 599 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------------------- 642 A QKL LT A +R LYG+ +RPSRF+ E+ E+ + Sbjct: 600 AEQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGEDLFDSKQQQSYSYTSRESSSFTSKTSS 659 Query: 643 --------EVRLRATVSRPVSHQRMG-------TPMVENDSGYKLGQRVRHAKFGEGTIV 687 + +AT +P + Q T + + +K+G +V H K+ GT+V Sbjct: 660 SGSLFDKYRAKSQATAYQPKAVQPSSIQPVRKQTVTANDGAVWKVGDKVMHKKWNVGTVV 719 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G + + VAF G GIK L+A++A +E + Sbjct: 720 KVTGEGTNQEIDVAFAGMGIKRLLASFAPIERI 752 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 317/748 (42%), Positives = 441/748 (58%), Gaps = 32/748 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L LN+KQREAV A +LV+AGAGSGKT VL RIA+L++ P++I+A+TFT Sbjct: 8 SDILKGLNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFT 67 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM RI +L+G +W TFH + R+LR F +LD+ DQ+ L+ Sbjct: 68 NKAAREMEERIERLVGPVASDIWTSTFHAMCARILRRDIHHLGYTSAFTVLDAADQVSLV 127 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACD 182 +RL++ MN+D +++ PR + I+ K+E + G+P ++ VY AY+ Sbjct: 128 RRLMQEMNIDVRKFEPRAVLHAISQHKNELRSAEKALDLAGSPYDKMVGDVYLAYERRLR 187 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL++ EL+ P +L +Y+ RF++I VDE+QDTN+ QY ++LLA Sbjct: 188 ENQALDFDDLLVKTVELFRKVPDVLAYYQHRFSHIHVDEYQDTNHAQYVLVKLLAERRRN 247 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGD DQSIYGWRGA + NI F D+P A IRLEQNYRST IL AN +I++N Sbjct: 248 LCVVGDSDQSIYGWRGADIRNILEFQRDYPDARVIRLEQNYRSTGRILRIANQVIQHNQM 307 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RL K LWTD +GE L+ A +E EA +V + I NG + AILYR+NAQSRV Sbjct: 308 RLEKNLWTDRGEGEKAKLFVAPDERVEADWVADEIARMVANGREYRDVAILYRTNAQSRV 367 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEEA LQ +PYRIYGG+RF+ER+E+KD ++YLRLIAN NDD +F RVVN P RGIGD T Sbjct: 368 LEEAFLQRGIPYRIYGGLRFYERREVKDVIAYLRLIANPNDDVSFLRVVNVPKRGIGDTT 427 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L+ + + +R R +L++A L E ++ +AASALQ F+ELI L + A +PL TD Sbjct: 428 LEKLAEYARHRGTSLFEAALHAL-EAGISKKAASALQSFVELIQTLQLQRAFLPLTDLTD 486 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE-EDEDLMPLQAFLSHAALE 541 ++ SG R E+ + + R+ENL+E ++ TR+F + D ++ L+ FL+H AL Sbjct: 487 ELLDRSGYREALRAERSLEAENRLENLDEFLSLTREFDEDGVPDGEMGALEQFLTHVALV 546 Query: 542 AGEG------QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + D V +MTLH+AKGLEFP VF+VG+EEG+FP + +LD G LEEE Sbjct: 547 SDADLPGGRPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGVFPHRRALDGGEELEEE 606 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP-- 653 RRL YVG+TRAM++L LT +R L+G+ PSRF+ E+P +E + Sbjct: 607 RRLCYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDIERAGEEDAMFGWGW 666 Query: 654 --------------------VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 + + Y+ G V H K+G G IV G G Sbjct: 667 RDARAGVRAPAHAVADAASGPRMSVPRSFGADLSVPYEPGDLVEHRKWGRGVIVAKSGEG 726 Query: 694 EHSRLQVAFQG-QGIKWLVAAYARLESV 720 E L V F+ G K L A +A + V Sbjct: 727 ESLELVVRFEDPIGEKRLFAKFAPIHKV 754 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 870 bits (2248), Expect = 0.0, Method: Composition-based stats. Identities = 302/754 (40%), Positives = 432/754 (57%), Gaps = 42/754 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ LN QR+AV LL+LAGAGSGKTRVL +RIA L++ + P+ I+A+TFTNKA Sbjct: 4 LEDLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIA-QGVEPWHILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLRLLKR 125 A EMR R+ L+G+ G+WV TFH R+LR+ + F I DS DQL L+K Sbjct: 63 AQEMRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSRSFVIYDSGDQLALIKS 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRA 184 +K +NLDEK++ PR I+ K++ L P + + EQ ++VY+ Y + Sbjct: 123 CMKELNLDEKKFAPRAIEAVISDAKNKLLTPEDFSRRAKDYFEQKAERVYELYLKKLLAN 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF ++++ L+ P +L Y+++F ILVDE+QDTN+ QYA + LLA + Sbjct: 183 NALDFDDIIMLTVRLFRENPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLLAKKYRNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA V+NI F D+P A+T++LEQNYRST +IL AAN++++NN R Sbjct: 243 VVGDDDQSIYMFRGADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERK 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVL 363 K LWT+ DG+PI Y A NE DEAR++ RI+ + G E A+LYR+NAQSRV+ Sbjct: 303 EKSLWTENEDGQPIVYYVADNEHDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQSRVI 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE ++ +PYRI+ G++F+ER EIKD L+YLR++ N D +F RV+N P RG+G+ TL Sbjct: 363 EERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVPKRGLGESTL 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ-ETADMPLHVQTD 482 + + + ++++ + A E L RA L F L+ L A+ + + Sbjct: 423 EKILDYANEQEMPVLDAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKLVE 482 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE------------EDEDLMP 530 V+K +G +K + + R+ENL E ++ T ++ ED + Sbjct: 483 EVLKRTGYWDNLVSDKSPEAEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDALVPG 542 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L FL +L A D DAV +MT+HSAKGLEFP VF+ GMEEG+FPS S+ + Sbjct: 543 LTGFLEQVSLVAQIDSLDQADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSMLDPV 602 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE-CVEEVRLRAT 649 L EERRL YV +TRA ++L L YA+ R LYG+ Y+RPS F E+P V+ + Sbjct: 603 LLAEERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHVLVDRDPIDPP 662 Query: 650 VSRPVSHQRMGTPMVENDS-----------------------GYKLGQRVRHAKFGEGTI 686 +R S YK+G++V HAKFG+G I Sbjct: 663 PTRAQKAHSAAARPAATPSGGPSPWRTGERTIGNPVQDAPGVDYKVGEKVEHAKFGKGVI 722 Query: 687 VNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 V ++G G + L V F G+ IK L+A YARL + Sbjct: 723 VAIKGEGSSAELSVVFGGE-IKKLMAEYARLVKL 755 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 291/764 (38%), Positives = 427/764 (55%), Gaps = 54/764 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QREAV LL+LAGAGSGKTRVL +R A+L+ +PY+IMA+TFTNKA Sbjct: 3 LDMLNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR RI ++G +WV TFH R+LR + +F I D++DQ L+K + Sbjct: 63 AGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMKDI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDRA 184 K + +D K + + + I+S KDE + P ++ G+ V++ VY+ YQ A + Sbjct: 123 CKRLEIDTKMYKEKMFLNVISSAKDEMIDPIEFENRFTGDFVKRKQALVYKEYQNALKQN 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL++ EL+ +L +Y+ERF I+VDE+QDTN +Q+ IRLLA + Sbjct: 183 NALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYKNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA + NI F F A+ I+LEQNYRST NIL AAN++I NN GR Sbjct: 243 VVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRK 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSRVL 363 K+LWTD G+ I+ + +EA +V I G +CA+LYR+NAQSR+ Sbjct: 303 DKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSRLF 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE + A++PY+I GG+ F+ R+EIKD L+YL+ I N +DD A +R++N P RGIG ++ Sbjct: 363 EEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVPKRGIGATSI 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + V + ++ + + A R + + +A R+A ++ F+ I +L + Sbjct: 423 NKVTDYAIEKGIDFYTALRYVDEVPGMA-RSAGKIKPFVMFIQSLRARAEMDSVSQLIQA 481 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I ++G + E ++ + RIEN++EL+ + EE+ L FL AL A Sbjct: 482 IIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEEN---PTLSGFLEEVALVAD 538 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL---DEGGRLEEERRLAY 600 D D V LMTLHSAKGLEFP V++ GME+G+FPS MS+ D +EEERRLAY Sbjct: 539 IDGLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDDATSEIEEERRLAY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV------------------- 641 VG+TRA + LT+T A R + G+ +++ SRF+ E+P E + Sbjct: 599 VGITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRDDDIERNSQ 658 Query: 642 ------------------------EEVRLRATVSRPVSHQR-MGTPMVENDSGYKLGQRV 676 R R V PVS+Q+ + YK+G RV Sbjct: 659 STYRKAKEAFKKTPTYGTEYATTFNTQRTRTPVYTPVSNQKSFASANTTGGLSYKVGDRV 718 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 H KFG G ++ + G + V F G K + A++A+L+ + Sbjct: 719 SHIKFGAGEVMAIVEGGRDYEVTVDFDKAGTKKMFASFAKLKKI 762 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 868 bits (2243), Expect = 0.0, Method: Composition-based stats. Identities = 383/723 (52%), Positives = 484/723 (66%), Gaps = 25/723 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LND+QREAV P LVLAGAGSGKTRVL+ RIA L+ P I+AVTFTNKAA Sbjct: 20 QLNDQQREAVLLPPGPALVLAGAGSGKTRVLISRIAHLLEE-GVRPAEILAVTFTNKAAR 78 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 MR R+ L+ +W+GTFHG+AHRLLR H LP DFQ+LDS+D RL++R ++ Sbjct: 79 SMRERLAALVQVDLAPLWMGTFHGIAHRLLRRHAEALGLPADFQVLDSDDSQRLVRRALR 138 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 + LDEKQW PR I KDEG P + + +VY+ Y+ +R GLVD Sbjct: 139 ELGLDEKQWTPRALAAQIGRWKDEGWTPAQVPAREVGRWTIPVQVYERYERIKERGGLVD 198 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 FA+LLL A LW IL+HYRERF ++LVDEFQDTN +QY W+R LA G++ +VGD Sbjct: 199 FADLLLYALRLWDQD-GILEHYRERFQHVLVDEFQDTNAVQYTWLRRLAA-HGRLFVVGD 256 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DDQSIY WRGA+VEN+ RF DFPGA +RLEQNYRS++ IL+AANA+I +N RLGK L Sbjct: 257 DDQSIYAWRGARVENLLRFAEDFPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTL 316 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALL 368 WT GEP+ LY A+NE DEARFVV +I+ W GG +CAILYRSNAQSRV EE L+ Sbjct: 317 WTAQDGGEPLELYAAYNEEDEARFVVAQIQQWVAQGGRREDCAILYRSNAQSRVFEEILV 376 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 + +PYR+YGG+RFFER EIKD L+YLRL NR+DDA+FERVVN PTRGIG+ TL+ +R Sbjct: 377 REGVPYRVYGGLRFFERAEIKDVLAYLRLCRNRHDDASFERVVNLPTRGIGNVTLERLRL 436 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDS 488 +R++ L+LWQA + K L F+ L+D LA E A L RVI+ + Sbjct: 437 QAREQGLSLWQAAGQAASPK---------LNAFLTLVDGLAAEIAGDELDAAVQRVIEVT 487 Query: 489 GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP--------LQAFLSHAAL 540 GLR Y ++ G++ + R+ENL+EL+ A R +++ EE E L L FL+HAAL Sbjct: 488 GLRDWYARD-GDRNEGRLENLDELINAARAYAFVEEREALRELNPDPGNRLSEFLTHAAL 546 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 EAGEG +D W+DAVQLM+LHSAKGLEFP VF+VG+EEG+FP Q SL++ L EERRL Y Sbjct: 547 EAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGLEEGLFPHQRSLEDADGLAEERRLCY 606 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRAM++L L YAE+RRL+G E PSRF+ +LP + V E+R RA + RPV Sbjct: 607 VGMTRAMRRLVLCYAESRRLHGSERASLPSRFLRDLPSDLVRELRPRARIRRPVVPTATL 666 Query: 661 TPM---VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 +P D Y LG R+RH FGEGT+++ E SG R+QV F G KWL L Sbjct: 667 SPRQGSAARDLPYPLGSRIRHPVFGEGTVLDYEASGRQGRIQVRFAS-GAKWLALGVVAL 725 Query: 718 ESV 720 E + Sbjct: 726 EHL 728 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 867 bits (2242), Expect = 0.0, Method: Composition-based stats. Identities = 288/751 (38%), Positives = 417/751 (55%), Gaps = 36/751 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L+ LN+ Q+ AVA + LL++AGAGSGKTRVL RIA L+ PY I+A+ Sbjct: 1 MD---LMQGLNEPQQRAVACLQGPLLIVAGAGSGKTRVLTFRIANLLE-HGVPPYRILAI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN-LPQDFQILDSEDQ 119 TFTNKAA EMR R+ L+G + +W+ TFH RLLR ++F I D+ D Sbjct: 57 TFTNKAAREMRERVDTLIGDAAQDVWLSTFHSFCARLLRMELEHYGRYAKNFVIYDAADS 116 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQ 178 L++ +K +N+DEK P +I+ K+ L + + + K+Y YQ Sbjct: 117 KGLIRECLKELNIDEKHTAPGAVQAHISDAKNRLLDVAAFTAQATDFFAEQVAKIYALYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LL+ EL + Y+++F ILVDE+QDTN QYA +LLA Sbjct: 177 SKLQENNALDFDDLLMLTVELLTKNEELRMKYQKKFQYILVDEYQDTNGAQYAITKLLAA 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGD DQSIYGWRGA + NI F D+P A I LEQNYRST NIL+AANA+IE Sbjct: 237 EHRNICVVGDADQSIYGWRGADMRNIMNFEQDYPEATVILLEQNYRSTKNILAAANAVIE 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSN 357 NN R K+LWTD G+ I++Y E +EA ++V ++ + A+LYR+N Sbjct: 297 NNLTRKKKELWTDNPTGDRITIYEGATEKNEASYIVREVERLHTMFHVKYGDIAVLYRTN 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR +EEA +PY + G +RF++R+EIKD ++YLR+I N D + R++N P RG Sbjct: 357 AQSRNIEEAFYATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVPRRG 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRE---LLQEKALAGRAASALQRFMELIDALAQETAD 474 +G ++ + +T+ + +++L++ + L L+ + AL+ F ++ + Sbjct: 417 LGPTSIARMMETAEEYRISLFEVITDAQLLSMIPKLSAKVKVALEEFAAMVFTFMGQLGT 476 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 P+H + VI+ SG E+EK E + R+ENL E ++ + F E+ + L F Sbjct: 477 RPIHEIVEDVIETSGYAAALEEEKKEDNRDRLENLREFISVAKNFDDGAEEGE-NGLADF 535 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L+ AL + Q + V LMT H+AKGLEFP VF+ GMEEG+FP +L + +EE Sbjct: 536 LAQIALISDVDQTEQSDGTVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRTLLDDTEIEE 595 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL-------- 646 ERR YVG+TRA ++L LTYA R +YG+ RPSRF+ E+PEE VE Sbjct: 596 ERRTCYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEADFFGGADL 655 Query: 647 ---------------RATVSRPVSHQRMGTPMVEND--SGYKLGQRVRHAKFGEGTIVNM 689 R P H ++ D + +K G VRH+K+G+G IV + Sbjct: 656 RAPSNIWSERSTRTQRKRYIAPPQHTAADGSVIRPDVSAAFKAGDAVRHSKWGDGRIVAI 715 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 GSGE + L +AF G+GIK V YA + + Sbjct: 716 SGSGEDAELSIAFPGEGIKKFVQKYAPILKL 746 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 867 bits (2241), Expect = 0.0, Method: Composition-based stats. Identities = 298/772 (38%), Positives = 424/772 (54%), Gaps = 63/772 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 +DSLN+ QREAV LLVLAGAGSGKTRVL +RIA ++ N P+ IMA+TFTNKA Sbjct: 4 IDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+G+L+G S GMWV TFH + R+LR + F I D +D RLLK + Sbjct: 64 ANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLLKDV 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRAG 185 + ++LD K+WP I+ K+E P +PV + +VY YQE A Sbjct: 124 MAGLDLDPKRWPVNSIRGKISQAKNELKAPGVYADEARDPVSKVTARVYAVYQERLKMAN 183 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL+ + L+ N P +L+ Y++RF +LVDE+QDTN+ QYA +LLA +M+ Sbjct: 184 AFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKHQNIMV 243 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA + NI F D+P A +I+LEQNYRS+ NIL+AANA++ +N R Sbjct: 244 VGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTKRKQ 303 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+L+T+ DGE I +Y A +E DE R++ I + G + E A+ YR+NAQSR LE+ Sbjct: 304 KRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRSLED 363 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 LL+A +PYRI GG +FF+R EI+D ++YL L N DD A +RV+N P RGIG T++ Sbjct: 364 MLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKRVINQPRRGIGKTTIEH 423 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + +R+ LT QA L ++ L R +A+ F+ LI+ + L + VI Sbjct: 424 IENVARNSNLTFMQAAEWCLADETLQMRTRNAIGGFVGLINDAQSYGGE--LRKVIEAVI 481 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM---------------- 529 S L EQE+ ++ ++RIEN++E ++ ++ + E ++ Sbjct: 482 DRSQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLS 541 Query: 530 --PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L+ FL L A V LMT+HS+KGLEF VF+ GMEE +FP S Sbjct: 542 PDSLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR 601 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV--- 644 + LEEERRLAYV +TRA ++L LT A R+++G+ + SRF+GE+P E + Sbjct: 602 DPQGLEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGLG 661 Query: 645 --------------------------------RLRATVSRPVSHQRMGTPMVENDS---- 668 + A +RP S+ +P E S Sbjct: 662 SSGFAGTGWEKRGSRRGISGSGKEAGGGRVFGQSSAGGTRPRSYTGRTSPNAEKKSAARV 721 Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +G V H FG G + ++G H + +G K L+ YA + + Sbjct: 722 TFAVGDIVDHKTFGRGRVTKVDGDTLHIKFS---KGNVTKKLLKDYAPIVKI 770 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 862 bits (2228), Expect = 0.0, Method: Composition-based stats. Identities = 297/794 (37%), Positives = 417/794 (52%), Gaps = 78/794 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LL+ LN +QR AV S LLV+AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 62 LDPDELLEGLNPQQRAAVVHAGSPLLVVAGAGSGKTRVLTHRIAYLLAARGARPGEILAI 121 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++G MWV TFH R+LR+ F I D+ D Sbjct: 122 TFTNKAAGEMKERVEAIVGGRARAMWVSTFHSACVRILRSEASRLGFGSSFSIYDAADAQ 181 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 RL+ + + ++LD K+ R I++ K+E + + N +E+T +VY AYQ+ Sbjct: 182 RLITLVTRDLDLDPKRHTARGLAAAISALKNELVDWETARDRATNHIERTVAEVYAAYQQ 241 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG- 238 +A +DF +L++ L P + +HYR RF ++LVDE+QDTN+ QY IR L G Sbjct: 242 RLTQANALDFDDLIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYVLIRELVGR 301 Query: 239 ----------------------------------------DTGKVMIVGDDDQSIYGWRG 258 + ++ +VGD DQSIY +RG Sbjct: 302 SASSADEPAAGSGEAVYSGGSAEPDGAGWPAKAVPPSGAVPSAELCVVGDADQSIYAFRG 361 Query: 259 AQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPI 318 A + NI F DFP A I LEQNYRST ILSAANA+I N R K+LW+D DGE I Sbjct: 362 ANIRNIVEFEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDGERI 421 Query: 319 SLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIY 377 + A NE DEA FV I D A A+ A+ YR+NAQSRV EE ++ +PYR+ Sbjct: 422 VGFVADNEHDEAAFVAEEIDRLGDENLARPADVAVFYRTNAQSRVFEEIFIRVGLPYRVV 481 Query: 378 GGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTL 437 GG+RF+ER+EI+D L+YLR++ N D R++N P RGIGDR +V + ++ Sbjct: 482 GGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVPRRGIGDRAEAMVSAFAERERIAF 541 Query: 438 WQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE 497 +A + + +A R+A +++ F+ L++ L ++ PL V + ++ +G + E Sbjct: 542 SEALSRVDEVPGVATRSARSIRDFVALLEGLREQLPAGPLAV-IEATLERTGYLSELVAE 600 Query: 498 KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ---ADTWQDAV 554 + Q R+ENL ELV ++F+ D L FL AL A Q D V Sbjct: 601 DTIEAQGRVENLRELVGVVQEFTERRPDG---TLAEFLEQVALVADADQIPDDDGSDGVV 657 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+ G+E+G+FP +L + LEEERRLAYVGVTRA +L LT Sbjct: 658 TLMTLHSAKGLEFPVVFLTGLEDGVFPHMRTLGDPTGLEEERRLAYVGVTRARARLYLTR 717 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT------------------------- 649 ++ R +G+ Y+ PSRF+GE+P+ VE RL Sbjct: 718 SQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAPAAGGGRFSGGGSAGAGNGSGGSG 777 Query: 650 --VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-G 706 + + P G RV H FG G +V G G+ + +V F + G Sbjct: 778 GKLPSSPFGAKPSRPAARPIIELTPGDRVTHDTFGLGVVVTTSGVGDSRQAKVDFGAETG 837 Query: 707 IKWLVAAYARLESV 720 K L+ YA +E + Sbjct: 838 TKDLLLRYAPVEKL 851 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 861 bits (2226), Expect = 0.0, Method: Composition-based stats. Identities = 309/790 (39%), Positives = 425/790 (53%), Gaps = 75/790 (9%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 L+ LN+ QR AV + LL++AGAGSGKTRVL HRIA L++ I+A+T Sbjct: 32 SPEQLVAGLNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAIT 91 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI +L+G S MW+ TFH L R+LR L +F I DS D LR Sbjct: 92 FTNKAAAEMRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLR 151 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG---NPVEQTWQKVYQAYQ 178 L+ ++ K LD K++ P+ I++ K+E + + +P E +VY+ Y Sbjct: 152 LITQVAKQHELDPKRFAPKAIQHRISALKNELVDDETCLARASSTDPFESAVAQVYRGYT 211 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + A +DF +L+ ++ P +L++YR RF ++LVDE+QDTN+ QYA +R L G Sbjct: 212 QRLRAANAMDFDDLIGETVHMFRAFPQVLEYYRRRFRHVLVDEYQDTNHAQYALVRELVG 271 Query: 239 ------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST 286 ++ +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST Sbjct: 272 GDSPGHTDESGIPPAELTVVGDSDQSIYAFRGADIRNITDFERDFPAARTIMLEQNYRST 331 Query: 287 SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GG 345 NILSAANA+I N R KKLWT DG PI Y A NE +EARF+ I QD G Sbjct: 332 QNILSAANAVISQNADRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEIDRLQDEHGI 391 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 + A+ YR+NAQSR LEE L++ +PY++ GG RF+ER+EIKDA+SYLR IAN DD Sbjct: 392 RPGDVAVFYRTNAQSRSLEEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDI 451 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 R+VN P RGIGDR + + ++ +A L + LA R+A+A++ F +L+ Sbjct: 452 TVRRIVNEPKRGIGDRAQGSIAALADREGISFSEAMHRLDEAPGLATRSANAIRTFAQLM 511 Query: 466 DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED 525 D L + + + V++ SG + ++R+ENL ELV R+F E+D Sbjct: 512 DDLGELAQGASVTAVLEAVLEQSGYLEALRTSTDPQDESRVENLAELVAVVREF---EKD 568 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDA-----------------------VQLMTLHSA 562 L FL H AL A Q + D V LMTLH+A Sbjct: 569 RPEAGLGEFLEHVALVADADQIPSRPDTAAEGTASAQQIAQEVEEARDQGVVTLMTLHTA 628 Query: 563 KGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG 622 KGLEFP VF+ GME G+FP Q S + +EEERRLAYVG+TRA Q+L +T AE+R L+G Sbjct: 629 KGLEFPVVFLTGMEHGIFPHQRSFADPSSMEEERRLAYVGITRARQRLYITRAESRSLWG 688 Query: 623 KEVYHRPSRFIGELPEECVEEVRLRATVSRPV---------------------------- 654 + ++ S F+ E+P ++ R A S Sbjct: 689 QSQFNPASPFLDEIPAHLIDWKREGAAASGGWGSPVHAGSGGGTRDPLRGSSWGAGAGSG 748 Query: 655 -SHQRMGTPMVEND---SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 + +R+ VE + +G V H FG G++V +EGSG+ + +V F G K L Sbjct: 749 ATFRRLSPSRVEPNREIPSLSVGDAVEHKAFGRGSVVALEGSGDKTVAKVRF-GAEEKRL 807 Query: 711 VAAYARLESV 720 + YA + V Sbjct: 808 LLRYAPMTKV 817 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 859 bits (2219), Expect = 0.0, Method: Composition-based stats. Identities = 281/742 (37%), Positives = 421/742 (56%), Gaps = 28/742 (3%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 + L +N +Q EAV LL+LAGAGSGKT VL++RIA+++ P+ I+A+T Sbjct: 3 TMQEKLKKMNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILAIT 62 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA E++ R+ ++G + G +W TFH R+LR F + D++D R Sbjct: 63 FTNKAAGELKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDSKR 122 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQE 179 L+K KA+N+D+K + + I+ KD L P Q+ + VY+ YQ+ Sbjct: 123 LVKDCQKALNIDDKMISHKSILSEISHAKDSMLSPADYQAAAGSDFRLAKIGAVYELYQK 182 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +LL EL+ P +L++Y+ RF I+VDE+QDTN +QY ++RLLA Sbjct: 183 RLREADAMDFDDLLGNTVELFRQCPDVLEYYQNRFRYIMVDEYQDTNQVQYEFVRLLAEK 242 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + + +VGDDDQSIY +RGA +ENI F +P A+ IRLEQNYRST NIL+AANA+I N Sbjct: 243 SKNLCVVGDDDQSIYKFRGATIENIMSFEKSYPNAKVIRLEQNYRSTKNILNAANAVISN 302 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R GK LWT+ +G+ I ++ + NE DEA FV I G ++ A+LYR N+Q Sbjct: 303 NEERKGKTLWTENPEGDKIQIHTSSNEQDEAGFVATTILEQVAKGRKYSDFAVLYRMNSQ 362 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 S +LE+ +++ +PYRI GG RF+ER+EI+D ++YL +I N +D+ R+VN P R IG Sbjct: 363 SNILEKVFVKSGIPYRIIGGHRFYERREIRDMIAYLSVINNPSDEIRLRRIVNQPKRSIG 422 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--MPL 477 D+T+ + + +L + + +L RA+ L+ F +++ L D + L Sbjct: 423 DKTIATASEIAGALGESLLEVLGRADEFDSLR-RASVKLKAFYDMMQELIDANDDESVSL 481 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 H + +++ +G EK E+ +TRIEN+ EL + +F EE+ + L AFL Sbjct: 482 HELYELILEKTGYIEALRGEK-EEAETRIENINELASNLLKF--QEENGEEATLSAFLEE 538 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 +L D D V +MT+HSAKGLEFP VF+ G EEG+FP ++ + ++EERR Sbjct: 539 VSLMTDIDNYDETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFPGLQAIYDPNEIQEERR 598 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------------ 645 L YV +TRA + L L A++R L+G +RPSRF E+P + + + R Sbjct: 599 LCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIPLDLINKTREQDWRKPDLGTK 658 Query: 646 -------LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 LR + H TP + + +K G V+H FG+G +++ G L Sbjct: 659 MPVAETELRRKSATAAMHFGQVTPPARSGNVFKTGDMVQHKTFGKGLVISATPMGNDVLL 718 Query: 699 QVAFQGQGIKWLVAAYARLESV 720 ++AF+ QG K L+A +ARL V Sbjct: 719 EIAFE-QGTKKLMANFARLAKV 739 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 366/753 (48%), Positives = 474/753 (62%), Gaps = 40/753 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LL LN +Q EAV P + L+LAGAGSGKTRVL RIA+L+ P +++AVTF Sbjct: 1 MTALLTDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM RI ++ + GMW+GTFHGL HR+LRAH+ DA LPQ FQILD DQL + Sbjct: 61 TNKAAREMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +KR++K +LDEK PRQ W+IN+ K+EGLR + + G+ +T + YQ Y+ Sbjct: 121 IKRILKERSLDEKVLAPRQLQWFINNAKEEGLRASQVDTRGS-FNRTLAECYQVYEAVSM 179 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---- 238 R G VDFAELLLR +EL + HYR RF +ILVDEFQDTN +QY WI+LLAG Sbjct: 180 RGGTVDFAELLLRCYELLSRNEILRDHYRGRFEHILVDEFQDTNRLQYQWIKLLAGSGSQ 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGDDDQSIY +RGA V N++ DF + IRLEQNYRS NIL AANALIE Sbjct: 240 QHAAIFAVGDDDQSIYAFRGAHVGNMRDLEKDFSVPKIIRLEQNYRSQGNILDAANALIE 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN GRLGK LWT GE + +Y A ++DE F+V+ IK G +L+E A+LYRSNA Sbjct: 300 NNKGRLGKNLWTAAGKGESVRIYYAATDVDETSFIVDEIKALHAEGLSLSEIALLYRSNA 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRVLE L AS+ YR+YGGMRFF+RQE+K AL+YLRL+A+ +DD A RV+N P RGI Sbjct: 360 QSRVLEHGLFNASISYRVYGGMRFFDRQEVKHALAYLRLVASPDDDNALLRVINFPPRGI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQ-EKALAGR---AASALQRFMELIDALAQETAD 474 G RTL+ ++ + +LWQA ++ + KA+ R + F+ L+ ++ Q Sbjct: 420 GARTLEQLQDQAEILGTSLWQAALKVCEGRKAVTTRGDQPGRGIAGFVNLVLSMQQACEG 479 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 PL RV+ SGL Y+ E+ E R+ENL+ELV A F + ED+ L AF Sbjct: 480 QPLPEIIRRVVDQSGLVAHYQAER-EGNNERLENLKELVNAATSFVHEAEDD---SLTAF 535 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L+HA+LE GE QA+ +QDAVQLMT+H+AKGLEF VFI G+EEG+FP + S +E LEE Sbjct: 536 LAHASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRNEPNGLEE 595 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR------- 647 ERRL YV +TRA Q+L L+YAE+R L+G+ + PSRF+ E+PEE ++ +R Sbjct: 596 ERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKRLRSSGFSGAGY 655 Query: 648 --------------------ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 PVS P N +G +GQ+V H KFG GTIV Sbjct: 656 RQGLSGTGQNTVSTAYSRQGRGKHTPVSAAVRVAPQGLNTAGLHIGQQVSHTKFGTGTIV 715 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 N EG+G R+QV F G KWL YA+L + Sbjct: 716 NYEGNGSDMRVQVNFHQTGTKWLSLTYAKLVPL 748 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 292/764 (38%), Positives = 437/764 (57%), Gaps = 46/764 (6%) Query: 1 MDV-SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MDV ++ +LN Q++AV LL+LAGAGSGKTRVL HR+A ++ + I+ Sbjct: 1 MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQG----GMWVGTFHGLAHRLLRAHHMDANLPQDFQILD 115 VTFTNKAA EM HRI +++ +W+ TFH R+LR H + F I D Sbjct: 61 VTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYD 120 Query: 116 SEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVY 174 S DQL +K+++ A+++++K +P + I+S K GL P ++ S ++Q +VY Sbjct: 121 SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY 180 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 +AY+ +A +DF +LLL+ ++L+ P +LQ Y+++F I+VDE+QDTN+IQY ++ Sbjct: 181 KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ 240 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +LA + +VGD+DQSIY WRGA ++NI F DF A+ I+LE+NYRS++NI++ A Sbjct: 241 MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT 300 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAIL 353 A+I+NN+ R K L+T G+ I + NE +E RFV I++ + G G+ + AI Sbjct: 301 AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIF 360 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRVLEE L +PYR+ GG+RF+ER EIKD +SYL+L N DD A +R++N Sbjct: 361 YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALKRIINV 420 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG T++ + + + + L++++A + +E+ ++RF++L+ L Q Sbjct: 421 PARGIGKTTIEKIEEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQ 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + L V+ + ++++ + Q RIENLEEL A QF +E + L + Sbjct: 481 HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFV--QERGEESTLIS 538 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGR 591 FL AL D Q++V +MTLH +KGLE+P VF+VG+EE +FPS S D Sbjct: 539 FLEEMALVNDVDSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQD 598 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV---------- 641 +EEERRLAYVG+TRA QKL LTYA+ RR++G+E ++ PSRFI E+P+ + Sbjct: 599 VEEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPR 658 Query: 642 -------------------------EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRV 676 + R R + + G RV Sbjct: 659 FMARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYENDGAGSAPFSKGMRV 718 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RH FG GT+ EG+GE+ ++ V F +K V YARLE V Sbjct: 719 RHPTFGVGTVYATEGTGENFKVSVMFTDNTVKKFVVKYARLERV 762 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 851 bits (2200), Expect = 0.0, Method: Composition-based stats. Identities = 291/770 (37%), Positives = 422/770 (54%), Gaps = 51/770 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN QREAV S LL++AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 27 LDPQALLDGLNGPQREAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAARQVHPGEIIAI 86 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ QL+G MWV TFH R+LRA H A L F I D++D Sbjct: 87 TFTNKAAGEMKERVAQLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSR 146 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQE 179 RL++ + + ++LD K++P R +++ K+E + P + P E+ + Y YQ Sbjct: 147 RLMQLVARELDLDPKRYPARGLAAQVSNLKNELVDPEEFAARAKGPNERALAEAYTLYQR 206 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +L++ L + PH+ + YR RF ++LVDE+QDTN+ QY I+ L Sbjct: 207 RLREAHALDFDDLIMTTVHLLQSHPHVAETYRRRFRHVLVDEYQDTNHAQYVLIKELVSG 266 Query: 240 T-----GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 T ++ +VGD DQSIY +RGA + NI F DF A TI LEQNYRST IL+AAN Sbjct: 267 TDGLDPAELCVVGDADQSIYAFRGATIRNILEFERDFTDARTILLEQNYRSTQTILNAAN 326 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAIL 353 A+I+ N R K+LW++ G+PI Y A E EA +V I D+G + A+ Sbjct: 327 AVIDRNTSRKPKRLWSEAGTGDPIVGYVADTEHTEADWVAREIDRLVDDGDTRPGDVAVF 386 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRV EE ++ +PY++ GG+RF+ER+E++DAL+YLR + N +D + RV+NT Sbjct: 387 YRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRVLNT 446 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIGDR V + +++ A R ++ RAA+ + F+ L+D + + Sbjct: 447 PRRGIGDRAEACVEALASRDRISFGAALRRARDAPGISTRAANGIAEFVALLDGVREVAE 506 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN----EEDEDLM 529 + ++ SG T E+ + R++NL+ELV+ R+++ E+ + Sbjct: 507 TSAPEEVLEALLNRSGYLTELEESLDPQDAGRVDNLQELVSVAREYTERVEGLGEEGERA 566 Query: 530 PLQAFLSHAALEAGEGQ----ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 + FL AL A Q Q V LMTLH+AKGLEFP VF+ GME+G+FP + Sbjct: 567 TVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHART 626 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 + LEEERRLAYVG+TRA Q+L L+ A TR +G+ Y+ PSRF+ ELP E V R Sbjct: 627 FGDNHELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPAYNAPSRFLEELPAELVRWER 686 Query: 646 LRATVSRPV-----------------------------------SHQRMGTPMVENDSGY 670 + + S + + Sbjct: 687 TEGSYTSWAGGGGGVGGRADRGQGGFTGGTPKAAQLARRLGVDGSRLATASELPSAPPRV 746 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G RV H ++G G ++ +EG G +R Q+ F Q + WLV +A ++ + Sbjct: 747 AVGDRVNHQRYGLGRVLTVEGHGPGARAQIDFGDQTL-WLVLRHAPIDRL 795 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 851 bits (2198), Expect = 0.0, Method: Composition-based stats. Identities = 283/680 (41%), Positives = 395/680 (58%), Gaps = 18/680 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD LL+ LN +Q+EAV LL+LAGAGSGKTRVL HRIA+L+ P +I+A+ Sbjct: 1 MD---LLNGLNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G MWVGTFH + R+LR + F I D++DQ Sbjct: 58 TFTNKAAREMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQ 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQ 178 ++K IK ++++EK +PP+ + I QKDE + H + + K+Y+ Y+ Sbjct: 118 VVIKECIKELSINEKNFPPKSVLETIGKQKDELIDAVHYEKLYASDFRMGKIAKIYKLYE 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF ++++ +L+ P +L +Y+ RF ILVDE+QDTN QY +R L+ Sbjct: 178 KKLKANNALDFDDIIMNTIKLFDKYPEVLDYYQRRFRYILVDEYQDTNTAQYTLVRKLSE 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYGWRGA + NI F DF TI+LEQNYRST NIL AAN +I Sbjct: 238 AQENLCVVGDDDQSIYGWRGANIRNILDFEKDFKKCCTIKLEQNYRSTQNILDAANHVIG 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN GR K LWTD G I + NE +EA + I+ D + A+LYR N Sbjct: 298 NNTGRKCKSLWTDNKGGSKIVICENDNEHEEALYAAREIQRLIFDEDRKYKDFAVLYRIN 357 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRVLEE ++ +PY+I GG +F++R+EIKD ++Y+RL+ N D+ + +RV+N P RG Sbjct: 358 AQSRVLEEMFMREGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGDNVSLKRVINVPKRG 417 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGD T++ + ++L+ + +L RAA L F +I+ M + Sbjct: 418 IGDTTVENAEILAYQGDVSLFTVISNAEEFPSL-KRAAQKLGNFSLMINKFRTMKEHMTI 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 D V++DSG+ YE E + Q+RIEN++EL + +F ED L+ FL+H Sbjct: 477 SQMLDMVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSEDN---SLEEFLAH 533 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEER 596 +L + QD V LMT+HSAKGLEFP VFI GMEEG+FP ++ EG +LEEER Sbjct: 534 ISLVSDIDSLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAITEGPEQLEEER 593 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RL YVG+TRA +KL L+ A R L+G Y+RPSRF+ E+PEE VE + Sbjct: 594 RLCYVGITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEIPEELVE-------YPFKSTS 646 Query: 657 QRMGTPMVENDSGYKLGQRV 676 T + + G R+ Sbjct: 647 HTRNTSQNSGSAFKQSGDRI 666 Score = 67.1 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 30/51 (58%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +G +V H KFG+GTI + L++ F+G G+K L+A+ A L + Sbjct: 735 FSVGDKVEHKKFGKGTISKVTADSNDQILEIQFEGAGMKRLMASMANLVRL 785 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 849 bits (2195), Expect = 0.0, Method: Composition-based stats. Identities = 310/745 (41%), Positives = 431/745 (57%), Gaps = 37/745 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLND QR+AV LL+LAGAGSGKTR L HRIA+L+ + P+ ++AVTF Sbjct: 1 MSDLLTSLNDCQRQAVLHEDGPLLILAGAGSGKTRTLTHRIAYLIQQQQVEPWQVLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAAAEMR R+ L+G + G+W+ TFH R+LR +DF I D +DQ RL Sbjct: 61 TNKAAAEMRERLQSLVG-NIDGLWISTFHAACARILRRDGEVLGYGRDFTIYDDQDQQRL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +K + + + EK PR I+ K+ GL P G+ + +VY+ YQ+ Sbjct: 120 IKDCLAQLRITEKDLKPRAVATAIDQAKNRGLLPEEYIP-GDHRGEQVARVYELYQKRLQ 178 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +A +DF +LLL+ L+ HI YR RF ++LVDEFQDTN +QYA ++ LA D Sbjct: 179 QANALDFGDLLLQTVRLFREYSHIRDAYRRRFAHLLVDEFQDTNQVQYAMVKALADDGRH 238 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIY WRGA++ NI F DFPGA IRLEQ+YRS++ IL AA ++ N G Sbjct: 239 LCVVGDDDQSIYAWRGAEIGNILNFERDFPGASVIRLEQHYRSSATILEAAGEVVACNIG 298 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R GK LWTD GEP++L ++L+EARFV I +D G L + A+ YR+NAQSRV Sbjct: 299 RKGKTLWTDNPAGEPLTLEPLPDDLEEARFVAAEIARLRDAGRHLRDVAVFYRTNAQSRV 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE L++ +PY + GG++F+ R EIKD L+YLR +AN D + R+VN P+RGIG T Sbjct: 359 LEETLVREGLPYVMVGGVKFYARMEIKDVLAYLRALANPADSLSARRIVNVPSRGIGAVT 418 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + + ACR L+ L G AA + F ++ AQ ++P T Sbjct: 419 TGRIAEHEEEAG-GFLAACRLCLERGVLKGAAAKKVAAFSAFMERFAQRMTEVPFPQLTA 477 Query: 483 RVIKDSGLRTMYEQEKG--------EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 ++++SG +E ++ + R+ENLE+L+ + E LQ + Sbjct: 478 DLLEESGYAPNLREEAQSAMTEGERKEAKGRLENLEQLLAGMEEHQATES-----SLQEY 532 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L AL DT D V LMTLH+AKGLEFP VF+ GMEEG+FP + E +EE Sbjct: 533 LEQVALVTDLDSYDTRLDRVTLMTLHAAKGLEFPVVFMTGMEEGIFPHGRAAGERDDVEE 592 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRL YVG+TRAMQKL LT+A RR+YG Y+ PSRF+ E+P + + + + +P Sbjct: 593 ERRLCYVGMTRAMQKLYLTHARRRRIYGDYQYNAPSRFLAEIPPHLMGD-KPAPALQKPA 651 Query: 655 SH-------QRMGTPMVENDSGY-------------KLGQRVRHAKFGEGTIVNMEGSGE 694 +H Q TP E++ + ++G VRH KFG G + +EG+G+ Sbjct: 652 THNLASVFEQIEPTPFEESEDFFEDVQVVPEAEEGLRVGLHVRHVKFGVGVVRRLEGNGD 711 Query: 695 HSRLQVAFQGQGIKWLVAAYARLES 719 ++ V F G G+K L+ +A LE Sbjct: 712 QQKVIVQFPGVGLKKLLVKFAGLEP 736 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 849 bits (2193), Expect = 0.0, Method: Composition-based stats. Identities = 295/751 (39%), Positives = 416/751 (55%), Gaps = 40/751 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN+ QREAV LL++AGAGSGKTRVL HRIA+L+ + P SI+A+TFTNK Sbjct: 60 LLDGLNEPQREAVLHAGGPLLIIAGAGSGKTRVLAHRIAYLVGERHAHPGSILAITFTNK 119 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R+ +L+G MWV TFH R+LRA A LP +F I D+ D RL+ Sbjct: 120 AAAEMRQRVEELVGPRARLMWVSTFHSACVRILRAQAKTAGLPSNFSIYDTADSQRLMTM 179 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRA 184 +++ + +D K+ PR + I+ K+E + S E+ +VY+ Y + A Sbjct: 180 VLRDLEIDPKKTTPRSMLGQISKLKNELVDHDTFSSRAQTEAERQLAQVYRLYADRLTAA 239 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK-- 242 +DF ++++ L P I +HYR RF NILVDE+QDTN QY ++ L G K Sbjct: 240 KALDFDDIIMTTVHLLQAFPMIAEHYRRRFRNILVDEYQDTNTAQYQLVKELVGQHEKRT 299 Query: 243 -------------------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNY 283 + +VGD DQSIY +RGA + NI F D+P A+ I+LEQNY Sbjct: 300 VDGDLVRPGLNTEDLPPAELCVVGDADQSIYAFRGATIRNIIEFERDYPDAKVIKLEQNY 359 Query: 284 RSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN 343 RST IL+AANA+IENN GR K LWTD DG+ I+ Y A +E EA+FV I D Sbjct: 360 RSTQTILTAANAVIENNKGRRAKNLWTDSGDGKLITGYVADDEHSEAQFVAEEIDRLSDA 419 Query: 344 G-GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN 402 A+ YR+NAQSRV EE ++ +PYR+ GG+RF+ER+E++DAL+YLR +AN + Sbjct: 420 KETTYGGVAVFYRTNAQSRVFEEVFVRVGLPYRVVGGVRFYERKEVRDALAYLRALANED 479 Query: 403 DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM 462 D + RV+NTP RGIG++ + + + S ++T A R + LA R+ A+Q F Sbjct: 480 DIVSVRRVLNTPKRGIGEKAEESLERLSARERITFGDALRRADEAPGLAARSVKAVQGFT 539 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 +++D L + A+ + +++ +GL + + +TRIENL EL+ +F Sbjct: 540 QMMDELREMAAEYGPAHVLEAILERTGLLQELQDSDDPQDETRIENLRELLAVALEFEQG 599 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDA---VQLMTLHSAKGLEFPQVFIVGMEEGM 579 + + L FL AL A Q +D V LMTLHSAKGLEFP VF+ GME+G+ Sbjct: 600 QPEGR---LPEFLERVALVADSDQIPDGEDHEGMVTLMTLHSAKGLEFPVVFLTGMEDGV 656 Query: 580 FPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 FP S+ + +EEERRLAYVG+TRA ++L ++ + R +G Y+ PS+F+GE+PE Sbjct: 657 FPHMRSMGDKKEMEEERRLAYVGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPEP 716 Query: 640 CVEEVRLRATV----------SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNM 689 VE R R S G RV H FG GT+V + Sbjct: 717 LVEWERTAPEPKTGERSPFGDRRGTSRGFQQRKGAVKVISLDPGDRVIHDSFGMGTVVAV 776 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 G + F G++ L+ A ++ + Sbjct: 777 SGRERD-EATIDFGSSGVRTLLLTMAPVQKL 806 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 279/757 (36%), Positives = 430/757 (56%), Gaps = 43/757 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ L LN +Q EA +L+LAGAGSGKTRVL HRIA+++ + PY+I+A+ Sbjct: 1 MDLKSL---LNKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIEN-DIKPYNILAI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G MW+ TFH R+LR +DF I DS DQ Sbjct: 57 TFTNKAAGEMRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQK 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQ 178 L+K ++K +N++EK+ + + I KD ++ N + Y YQ Sbjct: 117 TLIKLVMKELNINEKEITDLEILGTIGKAKDNIQSAQSFKKENEDNFRKNKIADAYLLYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF +L+++ EL+ +L+ Y+ +F I++DE+QDTN QY + +LLA Sbjct: 177 KKLKENNALDFDDLIVKTVELFRKHNDVLEFYQNKFKYIMIDEYQDTNKAQYEFAKLLAA 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA + NI F D+P A+ ++LEQNYRS NIL AAN +I+ Sbjct: 237 KHKNICVVGDDDQCIYAWRGADIRNILDFEKDYPEAKVVKLEQNYRSKGNILEAANKVIK 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN R K L T+ +GE IS++ A+++ EA FVV+ I+ + DNG + A+LYR+N Sbjct: 297 NNAERKFKILRTEQVEGEKISIHRAYSDKMEAAFVVSEIEKLKNDNGYKYKDFAVLYRTN 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR EEAL +A +PYRI+GG++F++R+EIKD L+YL++I N D + R++N P R Sbjct: 357 AQSRNFEEALRRAGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVPKRS 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGD T++ ++ + + TL+ ++ L R+ + +++F ++++ + + + + Sbjct: 417 IGDTTVEKLQNHATEIDDTLYNVLLDVDYVPGLTARSINPIKKFTDMMEEIMVMSEQLSV 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + V++ +G + K + Q+RIENLEELV+ +F + E++ L A+L Sbjct: 477 SQLIEYVLEKTGYLKSLKDSKLIEDQSRIENLEELVSDAVEFEKSNEED--KSLSAYLEK 534 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + + V LMT+HS+KGLEFP VF+VGME G+FP+ + ++EE RR Sbjct: 535 VALVQDMDDLEAEDNYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDNQMEEARR 594 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL----------- 646 L YVG+TRA +KL +T AETR ++GK V + S FI E+P + V + Sbjct: 595 LCYVGITRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVNINGKSSSNSFKN 654 Query: 647 -------RATVSRPVSHQRMGTPMVENDSGYK----------------LGQRVRHAKFGE 683 P S + + N+S K +G++V+H KFG Sbjct: 655 SSQTYGETRKTYNPHSIRGGMSASKANESLNKTLSGKSSGNAGIDELTMGRKVKHPKFGV 714 Query: 684 GTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 GT++ G+ +L +AF QG+K L+ ++A LE + Sbjct: 715 GTLITKSKVGDDYKLTIAFDSQGVKHLMFSFAPLELL 751 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 266/766 (34%), Positives = 412/766 (53%), Gaps = 52/766 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ L LN +Q EA A +LVLAGAGSGKTRVL +RIA ++ Y+I+A+ Sbjct: 1 MDLKKL---LNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI +L+ + MWV TFH R+LR ++F I DS DQ Sbjct: 58 TFTNKAAGEMKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQ 178 L+K+ +K +N+ +K ++ + I QKD + + + + VY YQ Sbjct: 118 NLVKQCMKELNISDKDINEKEIISKIGKQKDNLITAEEYKKRNEKDFRKNRIADVYLLYQ 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + +DF +L+ + EL+ P +L+ Y+ +F I+VDE+QDTN QY +++LA Sbjct: 178 KKLKNSNALDFDDLIFKTVELFKKHPEVLEFYQNKFKYIMVDEYQDTNKTQYQLVKMLAA 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA ++NI F D+P A+ ++LE+NYRS +NIL+AAN +I+ Sbjct: 238 AHRNIFVVGDDDQCIYQWRGADIKNILDFEKDYPEAKVVKLEENYRSKANILNAANTVIK 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSN 357 +N+ R K L T +GE I +Y A++++DE F+ N IK + + + AILYR+N Sbjct: 298 HNSQRKNKVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIKKENRSYKDFAILYRTN 357 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV E+ ++ +PYRI GG++F++R+EIKD +YL+ I N DD + +R++N P R Sbjct: 358 AQSRVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVPKRA 417 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ ++ + ++ ++ L+ R+ S++ +F LI+ + + + Sbjct: 418 IGAATVSKIQDFANYMDECMYSVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDKVSV 477 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ +G + + +RIEN++ELV+A +F ED+ L AFL Sbjct: 478 SNLIQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVEFENTSEDK---SLSAFLEK 534 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + D D +MTLHSAKGLEFP VF+VGME G+FP SL+ +EE RR Sbjct: 535 ITLVSDVDNYDEDTDTTVMMTLHSAKGLEFPVVFMVGMENGIFPGAQSLENFAEMEESRR 594 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------------ 645 L YVG+TRA ++L +T A TR+++G+ V + S FI E+ E VR Sbjct: 595 LCYVGITRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESAVKSST 654 Query: 646 -------------------------------LRATVSRPVSHQRMGTPMVENDSGYKLGQ 674 + + G N +G+ Sbjct: 655 VRLNSVANGATISSHSLSSFGVKKAEKTINSILSNSYTSQGSNEKGNKKDLNLDEITVGR 714 Query: 675 RVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +V H KFG GTIV+ + ++ +AF GIK L+ + A ++ + Sbjct: 715 KVSHDKFGVGTIVSATKTNNDVKVTIAFDNMGIKQLMFSMAPIKLI 760 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 350/796 (43%), Positives = 480/796 (60%), Gaps = 90/796 (11%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL +LND+Q AV P + L+LAGAGSGKTRVL RIAWL+ SP SI+AVTFTNK Sbjct: 31 LLQNLNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNK 90 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ ++ + GMW+GTFHGL +RLLRAHH A LP FQILD++DQL +KR Sbjct: 91 AAKEMTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQILDTQDQLSAVKR 150 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 L K N+DE+++PP+Q ++I+ K+EGLRP + + + ++YQ Y+E C R G Sbjct: 151 LCKQFNIDEERFPPKQMAYFISGCKEEGLRPGDVDARDADGRKKV-ELYQLYEEQCQREG 209 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD------ 239 +VDF EL+LR++EL + I HY+ RF +ILVDEFQDTN +QYAW++ +AGD Sbjct: 210 VVDFGELMLRSYELLRDNDPIRAHYQRRFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRL 269 Query: 240 --TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V+ VGDDDQSIY +RGA+V N+Q F+ +F I+LEQNYRS SNIL +ANALI Sbjct: 270 VTHGSVLAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRSYSNILDSANALI 329 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRS 356 +N+ RLGK L T GEP+ +Y A +L EA+++V+ I+ +++G E A+LYRS Sbjct: 330 SHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWMVDEIRQLARNDGFERREIAVLYRS 389 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSRV+E AL A++PYR+YGG+RFFER EIK AL+YLRL+ N +DD +F RVVN P R Sbjct: 390 NAQSRVIESALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFMRVVNFPPR 449 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG RT++V++ +R +L A A+ G+A + L F+ ++D + ++T Sbjct: 450 GIGARTVEVLQDAARQAGCSLHDAV------SAVPGKAGANLGAFVAMVDVMREQTQGQT 503 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE------------- 523 L ++++ SGL Y EK +G R+ENL+EL+ A F E Sbjct: 504 LRGIIGQMLESSGLVEHYRAEK--EGADRLENLDELINAAESFVTQEGFGRDAVALPVDE 561 Query: 524 --------------------------------EDEDLMPLQAFLSHAALEAGEGQADTWQ 551 E L PL AFL+HAALEAG+ QA Q Sbjct: 562 HGASLRQSPASQGIDPSLPVVDEPLPGGVDADTGETLSPLAAFLTHAALEAGDNQAQAGQ 621 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLT 611 DAVQLMT+H++KGLEF VFI GMEEG+FP + S+ + LEEERRL YV +TRA ++L Sbjct: 622 DAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLY 681 Query: 612 LTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ-------------- 657 L++++TR L+G+ Y+ SRF ELPE ++ + + + Q Sbjct: 682 LSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQGFGSFAPQSGGRGGSAGTPWGG 741 Query: 658 -------------RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 + G ++G V H KFGEG ++++EGSG+ +R QV F Sbjct: 742 FGSGGKSETFASPPVPAQKAPPAHGLRVGLAVFHTKFGEGKVLSLEGSGDDARAQVNFPR 801 Query: 705 QGIKWLVAAYARLESV 720 G KWL + A+L V Sbjct: 802 HGTKWLALSVAKLTVV 817 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 846 bits (2185), Expect = 0.0, Method: Composition-based stats. Identities = 288/775 (37%), Positives = 416/775 (53%), Gaps = 64/775 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 ++ LND Q++A LL+LAGAGSGKTRV+ HR+A+LM E +P +I+A+TFTNK Sbjct: 16 IMAGLNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNK 75 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ ++G +WV TFH L R+LR + ++F I DS+DQ +K Sbjct: 76 AAREMRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFDIYDSDDQKSTVKS 135 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDR 183 ++K +D K++P + M I+ K++ + P ++ + +VY YQ + Sbjct: 136 ILKDFQIDPKRYPEKMFMSEISKAKEKYMSPDEFARRNAADYAATKVAEVYTEYQGRLKK 195 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +L+ + EL+ + P +L Y+ RF I+VDE+QDTN+IQ+ +++LA + Sbjct: 196 NNAMDFDDLIYKTVELFEHNPDVLDTYQNRFRYIMVDEYQDTNHIQFLMVKMLARKYRNL 255 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA + NI F ++ A+ I+LEQNYRS NIL+AANA+I++N GR Sbjct: 256 CVVGDDDQSIYKFRGANITNILNFEKEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGR 315 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K LWTD GE IS E E V +RIKT G + AILYR+NAQSRVL Sbjct: 316 KDKALWTDQDAGEKISFDQCDTEYAEGDLVASRIKTLVRQGVGYRDIAILYRTNAQSRVL 375 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E ++ A++PYR+YGG F+ R+EIKD L+YL++I N D+ F RVVN P RGIG+ +L Sbjct: 376 GEKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNTTDNLYFRRVVNVPKRGIGEASL 435 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPLHVQTD 482 V + L++ A + +A + + +++F LI + D L D Sbjct: 436 SKVESFADAYGLSMMDAAARADEIPGMAVKTSGKIKQFATLIQSFRDMLQDGESLDAVYD 495 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 R+++D+G + E E+ TR+EN++EL +F E+ L FL AL + Sbjct: 496 RILEDTGYESELIAEHTEESMTRLENIDELRNKVVEFVDENEE---AGLSEFLEEIALVS 552 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLAY 600 + V+LMTLHSAKGLEFP VFI GME+ +FPS M+L D+ LEEERRL Y Sbjct: 553 DLDSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNSDDPDALEEERRLCY 612 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---------VRLRATVS 651 VG+TRAM+KL L+ A R ++G + SRFI E+P E R +V Sbjct: 613 VGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIPPLLFEHEADMRNMAKRRETESVD 672 Query: 652 R----------------------PVSHQRMGTPMVENDSGYKLG---------------- 673 R P P G Sbjct: 673 RYNRGDLYSDSSYGSSYNYKPRTPGKEYGQKNPYSSYARQKSYGQPSTQPAFGKAFVVSA 732 Query: 674 ---------QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 RVRH KFG GT+ N+E + + V F G++ + A++A+L+ Sbjct: 733 SGKPDYEVGDRVRHIKFGVGTVENLEKGDKDYEVTVNFDRCGVRKMFASFAKLKK 787 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 845 bits (2184), Expect = 0.0, Method: Composition-based stats. Identities = 298/775 (38%), Positives = 416/775 (53%), Gaps = 61/775 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LL LN +Q AV S LL++AGAGSGKTRVL HRIA+L++ P I+A+T Sbjct: 26 DAKELLHGLNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAIT 85 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI L+G + MW+ TFH R+LR L F I DS D LR Sbjct: 86 FTNKAAAEMRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLR 145 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+ + + ++LD K++ P+ I++ K+E + + +P EQ +VY+ Y + Sbjct: 146 LITLIARGLDLDPKRFAPKAMQHKISALKNELIDDDAFAATATDPFEQGVAEVYRGYTQR 205 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +A +DF +L+ + L+ P + +YR RF +++VDE+QDTN+ QYA ++ + G Sbjct: 206 LRQANALDFDDLIAQTVWLFRAFPGVADYYRRRFRHVMVDEYQDTNHAQYALVKEIVGPA 265 Query: 241 -------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 ++ +VGD DQSIY +RGA + NI F D+P A TI+LEQNYRST ILSAA Sbjct: 266 EGSGDEPAELTVVGDSDQSIYAFRGADIRNIVEFEKDYPNARTIKLEQNYRSTQTILSAA 325 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAI 352 NA+IE N R K+LWT DGE I Y A NE +EARF+ I QD + AI Sbjct: 326 NAVIEKNPDRPVKRLWTAEGDGEKIIGYVAENEHEEARFIAEEIDRLQDEADFRPGDVAI 385 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 YR+NAQSR +EE L++ +PYR+ GG RF+ER+EIKDAL+YLR++ N DD R++N Sbjct: 386 FYRTNAQSRSIEEILMRVGLPYRVVGGTRFYERKEIKDALAYLRVLVNPEDDVNLRRILN 445 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P RGIGDR V + + + A R A+A R+ +A+ F++LID L + Sbjct: 446 EPKRGIGDRAEGAVAALAERERSSFMAALRHAEDAPAIATRSLNAVNGFVKLIDDLTEVA 505 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + + V++ +G + ++R+ENL ELV R++ E D+ L Sbjct: 506 STSGAATALEAVLEQTGYLETLRASSDPQDESRVENLAELVAVVREY---ERDKPEGSLT 562 Query: 533 AFLSHAALEAGEGQADTWQDA--------------VQLMTLHSAKGLEFPQVFIVGMEEG 578 FL AL A Q + V LMTLH+AKGLEFP VF+ GME G Sbjct: 563 DFLEGVALVADADQIPDAPGSDTEAAVAEARRLGVVTLMTLHTAKGLEFPAVFLTGMEHG 622 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +FP S + L EERRLAYVG+TRA ++L LT AE R L+G+ Y+ S FI E+P Sbjct: 623 IFPQARSATDAKELAEERRLAYVGLTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEVPA 682 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVENDSGY---------------------------- 670 +E R + + P + S + Sbjct: 683 NLIEWKREGMSRAIPSIGSSGFGRDRYSGSHWGAGSAVGGRDAGQLPPSLATRSARVQPQ 742 Query: 671 ------KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +G +V H FG GT+V +EGSG+ + +V F + K L+ YA L Sbjct: 743 KEIPQLSVGDKVEHTSFGAGTVVALEGSGDKTVAKVRFAAE-EKRLLLRYAPLTK 796 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 842 bits (2175), Expect = 0.0, Method: Composition-based stats. Identities = 279/754 (37%), Positives = 420/754 (55%), Gaps = 48/754 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LN QREAV +L+LAGAGSGKT+VL RIA+L+ + +I+A+TFTNKA Sbjct: 11 LDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITFTNKA 70 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+ Q +G MW+ TFH R+LR + F I DS DQ+ L+K Sbjct: 71 ANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTLVKDC 130 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ--TWQKVYQAYQEACDRA 184 +K +NL +K + P+ + I+ KD+ P + + +Y YQ+ R Sbjct: 131 LKELNLSDKVFEPKAVISAISGAKDKLYTPKQFKDINMADNRMVKIADIYALYQDRLKRN 190 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L+ EL+ +L +YR RF I+VDE+QDT+ QY I+LLA + + Sbjct: 191 SALDFDDLILKTVELFKANDEVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQNIC 250 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA + NI F D+ ++LEQNYRST IL AAN +I NN R Sbjct: 251 VVGDDDQSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERK 310 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 KKLW++ +GE I + +E++EA F+ + I + + A+LYR+NAQ+R + Sbjct: 311 RKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQARPV 370 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+AL ++ +PY IYGG +F+ER+EIKD L+YLR+I N DD + +R++N P RGIG RT+ Sbjct: 371 EDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVPRRGIGLRTI 430 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + +Q +++ ++ ++ +A +++ F+++I L P+ ++ Sbjct: 431 EKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIEK 490 Query: 484 VIKDSGLRTMYEQE----------KGEKGQTRIENLEELVTATRQFSYNEEDEDL-MPLQ 532 V+ +G + KGE+ Q RI+NL E ++ +F + +D L+ Sbjct: 491 VLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDLE 550 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD--EGG 590 FL+ AL E + D V LMT+H++KGLEFP VF+ GMEEG+FP ++ Sbjct: 551 TFLTSIAL-TSESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSDS 609 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL---- 646 ++EEERRL YVG+TRA ++L ++ E R LYGK SRF+ ELPEEC+E + Sbjct: 610 QIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKKE 669 Query: 647 -----------------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGE 683 ++ V+ V+ + N KLG +V H KFG Sbjct: 670 LSYSKASYNMLDKYTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGSKVHHPKFGV 729 Query: 684 GTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 GT+V++ G+ + +AF QGIK + Y L Sbjct: 730 GTVVSIIGTD----VTIAFDQQGIKKINKEYTTL 759 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 298/784 (38%), Positives = 437/784 (55%), Gaps = 69/784 (8%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 ++ + LN QR+AV A LL++AGAGSGKTRVL HRIA+L+ + +P+SI+A+T Sbjct: 6 NIDQAVQKLNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAIT 65 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM+ R+ L+G + +WV TFH + R+LR +F ILDS DQL Sbjct: 66 FTNKAAREMQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFSILDSADQLS 125 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEA 180 +++ +K +N+D K++ P+ I+ K+E + P + G+ KV++ YQ+ Sbjct: 126 VIRNCMKELNIDVKKFEPKAVQAEISGAKNELITPERYEQKTGDYFTDIVAKVFKMYQKR 185 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF +L++ +L+ P +L+ Y+ +F I VDE+QDTN QY R+LA Sbjct: 186 LKSNNSLDFDDLIMTTIQLFKEMPEVLEFYQNKFRYIHVDEYQDTNRAQYMLCRMLADKH 245 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQSIY WRGA + NI F +D+P A TI LEQNYRS++NIL AANA+I+ N Sbjct: 246 HNICVVGDSDQSIYRWRGADITNILNFEDDYPEARTIMLEQNYRSSANILEAANAVIKLN 305 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 GR KKLWTD +G+ I+LY A +E DE FV I +G + AILYR+NAQS Sbjct: 306 TGRKPKKLWTDQGEGDMITLYQADSEHDEGYFVTGTISKNVKSGRRYDDHAILYRTNAQS 365 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+EE L+++ +PY+I GG++F++R+EIKD L+YLRLI+N +DD + +R++N P RGIGD Sbjct: 366 RVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQRIINVPKRGIGD 425 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T+ + + + + +++ L Q L RA L F ++ID L Q + + Sbjct: 426 TTVAKLAEEAVRQGTSIFSVLGNL-QGIDLNARAQGLLHEFRDMIDNLTQMVDYLSVTEL 484 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T++V++ S R ++EK + R+EN++E ++ T F ED+ L AFL+ AL Sbjct: 485 TEKVLEMSQYRIELQREKTLESTARLENIDEFLSVTMDFEKRNEDK---TLVAFLTDLAL 541 Query: 541 EAGEGQA-------DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 A ++V LMT+HSAKGLEFP VFI+GMEE +FP +L++ LE Sbjct: 542 IADIDSMDKDDDGKPADNNSVVLMTMHSAKGLEFPVVFIIGMEESIFPHSRALNDNEELE 601 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRLAYVG+TRA ++L LT A +R L+G+ + PSRF+ E+P+ T+ R Sbjct: 602 EERRLAYVGITRAEKQLYLTCARSRTLFGRISANLPSRFLQEVPDNVKTLASPGGTIGRS 661 Query: 654 VSHQ------------------------RMGTPMVENDSGYKLGQRVR------------ 677 S G RV Sbjct: 662 GSFAGGASRASYGSSSGSSFGGGRAPSFGASGAGARTAGPSGAGVRVSTPLDAAAKAATN 721 Query: 678 --------------------HAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYAR 716 H K+GEG IV+++G+G LQ+AF G+K L+A +A Sbjct: 722 AGAAAGNAADRNFVAGDKVAHGKWGEGVIVSVKGTGNDMELQIAFPAPVGVKRLLAGFAP 781 Query: 717 LESV 720 + V Sbjct: 782 ITKV 785 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 840 bits (2171), Expect = 0.0, Method: Composition-based stats. Identities = 306/798 (38%), Positives = 418/798 (52%), Gaps = 82/798 (10%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 L++ LN +Q AV + LL++AGAGSGKTRVL HRIAWL++ P+ I+A+T Sbjct: 62 TPDSLVEGLNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAIT 121 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR R+ L+G + MW+ TFH A RLLR + L F I DS D LR Sbjct: 122 FTNKAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLR 181 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS---YGNPVEQTWQKVYQAYQ 178 L+ + K LD K++ P+ + I+S K+E + + G+P + VY+ Y Sbjct: 182 LVTTVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYT 241 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A +DF +L+ ++ P +L +YR RF ++LVDE+QDTN+ QY IRLLAG Sbjct: 242 ARLRQANALDFDDLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAG 301 Query: 239 D----------TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSN 288 G++ +VGD DQSIY +RGA + NI F DF A TI+LEQNYRST Sbjct: 302 PAGDPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQT 361 Query: 289 ILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGAL 347 IL AANA+IE N R K+LWT +G I Y A NE EA ++ I QD G Sbjct: 362 ILDAANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIAATIDRLQDEDGIRP 421 Query: 348 AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 ++ A+ YR+NAQSR LEE L+ +PYR+ GG RF++R+EIKDAL+YLR+I N +DD Sbjct: 422 SDVAVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNV 481 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDA 467 R++N P RGIGDR V ++ + T A R+ LA R+ A+ F++++D Sbjct: 482 RRILNEPKRGIGDRAEGAVAAWAQRNRSTFSAALRDAEHAPGLAARSLKAVNGFVQMMDD 541 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 LAQ + V++ SG+ + + + ++R +NL ELV R F D Sbjct: 542 LAQVAETAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFEKTTPDG- 600 Query: 528 LMPLQAFLSHAALEAGEGQADTWQD-----------AVQLMTLHSAKGLEFPQVFIVGME 576 L FL AL A Q T D V LMTLH+AKGLEFP VF+ GME Sbjct: 601 --TLSDFLEQVALVADADQLPTAPDVEGEALAEAQGQVTLMTLHTAKGLEFPVVFLTGME 658 Query: 577 EGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 G+FP S+ + L EERRLAYVG+TRA ++L LT AE R L+G+ ++ PS+F+GE+ Sbjct: 659 HGVFPHARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEI 718 Query: 637 PEECVE----------------------------------EVRLRATVSRPVSHQRMGTP 662 PE ++ R +RP R P Sbjct: 719 PEALIDWEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDDGARPQRLTRGDEP 778 Query: 663 -------------------MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 + G RV HA FGEG + + G+G+ + V F Sbjct: 779 ADLTVPSAVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFD 838 Query: 704 GQG-IKWLVAAYARLESV 720 G K L+ YA L V Sbjct: 839 ATGAQKRLLLRYAPLTKV 856 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 295/752 (39%), Positives = 431/752 (57%), Gaps = 36/752 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN++Q EAV +L+LAGAGSGKT+ L +IA+L+ + P++I+A+TF Sbjct: 1 MRDLLASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLLE-KGVKPWNILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLR 121 TNKAA EMR R+ L+G S +W+ TFHG ++LLR F I D D Sbjct: 60 TNKAAKEMRQRVDALVGPSAKDVWLYTFHGFCNQLLRRDINALPGYTTSFSIYDPSDCKN 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEA 180 +LK +K +NLDEK +P + I++ K+ + + ++Y YQ+ Sbjct: 120 VLKEALKKLNLDEKFYPLPGLLATISNAKNAQVDAAAFARQAEDYHAKKVAEIYAEYQKH 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 ++ VDF +LLL +L P + + Y+ +F +L+DE+QDTN++QY +LL+ Sbjct: 180 LVQSNAVDFDDLLLLTVKLLQTVPEVREKYQNKFHYVLIDEYQDTNHVQYLLAKLLSAPE 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGD DQSIYGWRGA + NI F D+P A +LEQNYRST IL AAN +I++N Sbjct: 240 NNLCAVGDIDQSIYGWRGADISNILDFEKDYPQARIFKLEQNYRSTQVILDAANEVIKHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K LWT+ +G+PI+ Y A ++ +EA FVV +I+ Q G L + AILYR+NAQS Sbjct: 300 AARRPKNLWTENGNGQPIAYYQARDDREEAEFVVGQIRKLQREGTKLGDMAILYRTNAQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EE L+ +PY + G ++F++R+E+KD LSYLR ++N D ER++N P RGIG Sbjct: 360 RMFEENLINNGVPYVMVGSLKFYDRKEVKDTLSYLRFLSNERDIQGLERIINEPKRGIGA 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T+ VR D +TL + + +Q + L GRA +Q F ++I LA+ +P+ Sbjct: 420 ATVAKVRTLLEDSGMTLPEVL-QTVQARELLGRAFPKIQAFSDMIQELARVKDTLPVKDL 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++V++ SG E ++ ++R++NL E + +F+ + +E+ L+ FL+H AL Sbjct: 479 MEQVLEKSGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDPGEENNKTLEDFLNHVAL 538 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A A QD+V LMTLHSAKGLEFP VFI GME+G+FPSQ SL++ +LEEERRL Y Sbjct: 539 VADIDDAKLTQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEERRLCY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR------------- 647 VG+TRA ++L LT +R +YG V + PSRF+ E+P +E V +R Sbjct: 599 VGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLIENVAVRRSTYGGYGGQRGH 658 Query: 648 ----------ATVSRPVSHQRMGTPMVEND--------SGYKLGQRVRHAKFGEGTIVNM 689 T++R + TP + ++ G + RH KFG GTI+ Sbjct: 659 QGSTGTHASLRTIARSRGGSILDTPAPRSRFVPEGGAVPEFRPGDKCRHKKFGTGTIIEA 718 Query: 690 EGSG-EHSRLQVAFQGQGIKWLVAAYARLESV 720 G E + VAF G GIK L Y LE + Sbjct: 719 RPDGSEGQLVTVAFPGSGIKQLATKYKILEKI 750 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 838 bits (2166), Expect = 0.0, Method: Composition-based stats. Identities = 284/779 (36%), Positives = 428/779 (54%), Gaps = 67/779 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN----------- 51 + +ND Q+EAV +LVLAGAGSGKT V+V+RIA ++ N Sbjct: 14 LKKYFSRMNDMQQEAVFTVNGPVLVLAGAGSGKTTVIVNRIANMIKFGNAFYDETRSGSE 73 Query: 52 ----------------------------CSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG 83 P++I+A+TFTNKAA E++ R+ ++G + Sbjct: 74 EDIAFLKDYAAGKTDDADTLRDIVAADPIKPWNILAITFTNKAAGELKERLAAMLGEEEA 133 Query: 84 -GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQA 142 + TFH R+LR+ DF I DS+D R++K ++ +++ EKQ P+ Sbjct: 134 VKINASTFHSACVRILRSEITALGYGSDFTIYDSDDSQRMIKSVMAELDISEKQLAPKAV 193 Query: 143 MWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELW 200 + I+ KD+ + P +++ + ++ K+Y YQE A +DF ++L EL+ Sbjct: 194 LGEISRAKDQMITPEQLRADAGQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELF 253 Query: 201 LNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQ 260 P +L+ YR R+ I+VDE+QDTN++Q+ + LL+ + +VGDDDQSIY +RGA Sbjct: 254 EQFPEVLEKYRTRYKYIMVDEYQDTNHVQFRLVSLLSDSHKNLCVVGDDDQSIYKFRGAN 313 Query: 261 VENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISL 320 +ENI F + F GA+ IRLEQNYRST IL+AAN++I NN GR K LWT G G+ + Sbjct: 314 IENILGFEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYW 373 Query: 321 YCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGM 380 Y A +E DEA FV IK + G A+ A+LYR NAQS +E L++ +PYR+YGGM Sbjct: 374 YKAVDETDEANFVAETIKKYHKETGRYADNAVLYRMNAQSNAIERMLMKCGIPYRVYGGM 433 Query: 381 RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQA 440 RFF+R+EIKD SYL I N ND F+R++N P RGIGD TL ++ SRD +L+ + Sbjct: 434 RFFDRKEIKDVTSYLAFINNHNDMLRFKRIINEPKRGIGDSTLALIEDISRDLKLSPFDV 493 Query: 441 CRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGE 500 + + LA + ++L+ E+ + L Q++ ++PL D V++ +G + E Sbjct: 494 LKTCEEYAPLAKK-VTSLRNAYEMFEDLTQKSEELPLDEFLDEVMEKTGYLDYLK--TLE 550 Query: 501 KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLH 560 T+IEN++EL ++ Q+ E+ L FL AL + D V LMT+H Sbjct: 551 NADTKIENVQELRSSVVQYMNESEE---PTLGGFLEEVALYTEADRDPETDDKVTLMTVH 607 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 SAKGLE+ +F+VG+++G+FPS S D +EEERRLAYV +TRA + L LT A R L Sbjct: 608 SAKGLEYDNIFVVGLDDGIFPSSRSFDSEDDMEEERRLAYVAITRAKKHLYLTNASQRML 667 Query: 621 YGKEVYHRPSRFIGELPEECVEEVRL-------------------RATVSRPVSHQRMGT 661 +G+ + SRF+ E+ E +E+ AT+ + ++ + Sbjct: 668 FGQTQRNVTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTEVHSATLQQQLARNKTKP 727 Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + Y G+RV H FGEGT+V++ S L+VAF+ G K ++A YA+L+ + Sbjct: 728 AAPKEAVTYTAGERVAHNIFGEGTVVSVTPMANDSMLEVAFEKVGTKKIMANYAKLKKL 786 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 838 bits (2165), Expect = 0.0, Method: Composition-based stats. Identities = 292/764 (38%), Positives = 426/764 (55%), Gaps = 52/764 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD LNDKQREAV ++++AG GSGKTR L HRIA+L++ P I+A+TFTNK Sbjct: 25 ILDGLNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTFTNK 84 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+ L+G GMWVGTFH RLLR +DF I D+ D RL+++ Sbjct: 85 AANEMQERVEALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLIRQ 144 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRA 184 +K NLD PR I+S K+E + P ++ +VY AY+ A +A Sbjct: 145 QMKGRNLDTDVVKPRSVQRMISSAKNEMIDPQEYAELARGDQQEIVAEVYPAYERALKQA 204 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LLL+ EL+ +L+ Y+ R+ + +DE+QDTN QY R L+ + Sbjct: 205 NALDFDDLLLKPIELFEQHEDVLEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHKNLC 264 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDD QSIY +RGA + NI F ND+P A TIRLE+NYRST NI+ A+++IE N+ ++ Sbjct: 265 VVGDDAQSIYAFRGADITNILNFDNDYPDATTIRLERNYRSTENIIRLADSIIEENDDQI 324 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVL 363 K LWTD A+GE ++L A +E DEA+ + R++ +G + A+LYR+NAQSR + Sbjct: 325 EKSLWTDNAEGEYVALMEALSEKDEAQKIERRVRDLHLRDGMEYGDFAVLYRTNAQSRAI 384 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEAL + ++PYR+ GG F+ER+EIKD L+YL+L+ N ND A+ +RV+N PTRGIGD+T Sbjct: 385 EEALRKENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYPTRGIGDKTQ 444 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--MPLHVQT 481 +++ ++ L+LWQA + + + L RA A+ +F LI A + +P Sbjct: 445 ARLQRYAQQHSLSLWQAVERVEEIETLGTRAERAVGKFRRLIARYASKAGTGSVPADELA 504 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 +I+D+GL + +E + R EN++EL++A ++ + ED + FL AL Sbjct: 505 RDLIQDAGLLSELRKEHTRENLQRWENVQELISALAEYVESTED---ATISTFLQEVALM 561 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + +A+ D V LMTLH+AKG EFP VF+ G+EEG+FP + + E LEEERRL YV Sbjct: 562 TDQDEAEEGDDKVTLMTLHAAKGTEFPVVFVAGLEEGLFPLEQATQEKAELEEERRLFYV 621 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---VRLRATVSRPVSHQR 658 GVTRA ++L L++A +R YG++ + SRF+ E+ + V L R + + Sbjct: 622 GVTRAEERLYLSWARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAEEG 681 Query: 659 MGTPMVENDSGY-----------------------------------------KLGQRVR 677 E D Y G +V Sbjct: 682 PSADYDEMDPHYYRQDLSGDGGATGSSDGLRRIESTDGGGGRRVVYDEGHGEIVPGAQVE 741 Query: 678 HAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLESV 720 H KFG G + ++EG G+ + V F G K L YA L + Sbjct: 742 HQKFGRGKVQSLEGEGDKATAVVFFGSDVGNKKLKLKYANLRVI 785 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 288/769 (37%), Positives = 419/769 (54%), Gaps = 58/769 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD + LN Q+ AV LL+LAGAGSGKTRV+ HRIA L+ P++I+AV Sbjct: 1 MD---FVKHLNQPQKSAVLHGEGPLLILAGAGSGKTRVITHRIAHLIHNHGVRPWNILAV 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM R+ +L+G + + TFH R+LR F I D D Sbjct: 58 TFTNKAAREMSERVSRLLGGGDAPL-IATFHAACGRILRREIHHLGFDSSFAIYDERDCE 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQ 178 RLLK L+K M+LD+K++ PR I+ K+ GL PH + + G+ ++Y AYQ Sbjct: 117 RLLKDLLKDMDLDDKKFSPRIVAARIDDYKNRGLFPHDLDPVATGDIFNAKVVQIYAAYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + +DF ++L++ L P + Q +ERF I+VDE+QDTN +QY IRLLAG Sbjct: 177 ERLRKCNALDFGDMLIQTVRLLEQFPEVRQRCQERFQWIMVDEYQDTNPVQYRLIRLLAG 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGDDDQSIY WRGA + NI F DFP +RLEQNYRST+ IL AA A++ Sbjct: 237 ERRNLCVVGDDDQSIYSWRGADIRNILEFEKDFPDVAVVRLEQNYRSTTTILKAAGAVVS 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N GR GK LWT+ +GE I + ++ +EAR V I + + G L E A+ YR+NA Sbjct: 297 RNIGRRGKTLWTENPEGEKIRYHRVESDREEARLVAREIVSLRSRGIPLEEMAVFYRTNA 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR++EEAL+ ++PY I GG+RF+ R E+KD L+YLR++ N D+ + +R++N P+RGI Sbjct: 357 QSRLVEEALVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVPSRGI 416 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T+D + Q + + A E L + + F+++++ + A L Sbjct: 417 GGATIDRISQRVASSGASFYAAMAECAGSGLLGSGPRARVASFVDMMERFREMVALRGLP 476 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+++SG + + ++ R+ENLE+L+ A +F E E L AFL Sbjct: 477 ELCQTVMEESGYLARLRESRDQEDSERLENLEQLLAAMEEF---CEKEPQAGLSAFLEQV 533 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + Q + +V LMTLH+AKGLEF VF++GMEE +FP +LD+ +EEERRL Sbjct: 534 SLVSDLEQGGQGKPSVTLMTLHAAKGLEFRAVFMIGMEERLFPHVRALDDLDGMEEERRL 593 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------------- 643 YVG+TRA ++L L R L+G+E + PSRF+ ++P +++ Sbjct: 594 CYVGMTRARERLYLLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGFRSAA 653 Query: 644 ---------------------VRLRATVSRPVSH------------QRMGTPMVENDSGY 670 R + H + + P E+D + Sbjct: 654 EQAGRNGQEPSTGIIAMGHSGRREKTVARHDGGHNLAQVVSACDEIEVIPEPPEEHDGVF 713 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +G +VRH FG+GTI +EGSGE ++ V F G K L+ +A LE Sbjct: 714 -IGMKVRHGTFGQGTIRKLEGSGESQKVIVWFNSVGPKKLMLRFAGLER 761 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 289/746 (38%), Positives = 427/746 (57%), Gaps = 32/746 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD LL LN+KQ+EAV LL+LAGAGSGKTR ++HRIA+++ P+ I+A+ Sbjct: 1 MD---LLSMLNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILAL 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RI + +W+GTFH + R+LR + +F I D +D Sbjct: 58 TFTNKAAGEMRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-----QTWQKVYQ 175 R++K ++K +++ +K++P I+ K+ + E ++Y Sbjct: 118 RVVKSILKDLDISDKEFPVEGVKSQISLLKNNLETSDDYLEEHDDFEGGYTEARIAQIYA 177 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + +DF +LLL + L+ P +L Y+ RF ILVDE+QDTN QYA + Sbjct: 178 EYQKRLLSSNAMDFDDLLLNMNILFAKCPEVLNKYKNRFKYILVDEYQDTNLSQYAIVSK 237 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA D + + GDDDQSIYGWRGA + NI F DF A IRLEQNYR T NIL+AAN Sbjct: 238 LAEDHRNICVCGDDDQSIYGWRGASIRNILEFEEDFEDAAVIRLEQNYRCTKNILNAANG 297 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILY 354 +IE+N R+GK L+TD +GE I A ++L+E+ + I + +G ++ AILY Sbjct: 298 VIEHNQRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIFCLNEYHGIPYSDIAILY 357 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR+LEE L++ ++PY+I G +F++R EIKD L+YL+LI N DD A RV+NTP Sbjct: 358 RTNAQSRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDILAYLKLIVNPQDDLALIRVINTP 417 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG +++ ++ + + ++++ + + G L F + I+ + + + Sbjct: 418 KRGIGPASVEKIKDYAFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIRRLPEN 477 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L I SG M ++ K E R+ENL+ELV A F NEE+ L+AF Sbjct: 478 NGLMDIVINTIHLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEEN---TLEAF 534 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L +AAL AG D V LMTLH+AKGLEF VF+ GMEE +FP+ +++E +EE Sbjct: 535 LENAALVAGVDSYDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFPTYRAVNEDSEMEE 594 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR--------- 645 ERRL YVG+TRA ++L ++ AE+RR+YG+ Y PSRF+ E+P+E +E Sbjct: 595 ERRLCYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIEGTNVIKESNKEK 654 Query: 646 --LRATVSRPVSHQRMGTPMVEN---------DSGYKLGQRVRHAKFGEGTIVNMEGSGE 694 L++++ R + EN D G ++ H+ +G GT+V ++GSGE Sbjct: 655 ELLKSSIKRIYDPYKQSPKKTENLFKQNNSFSDVDLNPGDKIDHSAWGVGTVVGVDGSGE 714 Query: 695 HSRLQVAFQGQGIKWLVAAYARLESV 720 +++ AF GIK +A A+ + V Sbjct: 715 DAKVTAAFPEIGIKKFMAGIAKFKKV 740 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 836 bits (2160), Expect = 0.0, Method: Composition-based stats. Identities = 291/735 (39%), Positives = 416/735 (56%), Gaps = 28/735 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+Q++AV LL+LAGAGSGKTRVL RIA L+ P+ I+A+TFTNKAAA Sbjct: 2 NLNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAA 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ +G MW+ TFH + R+LR + F I DS +Q +K ++ Sbjct: 62 EMRERMTNDVGEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVM 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRAG 185 K MN++EK++ +I+S+K++ + P +S GN E K+Y AYQ+ Sbjct: 122 KEMNINEKEFQVGAVFSHISSKKNQFILPRQALKESEGNFREHIIAKIYDAYQDKLYENN 181 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 ++DF +LL+ L+ N P +L Y+ +F ILVDE+QDTN +QY IR LA + + Sbjct: 182 VMDFDDLLVNVCILFNNHPDVLSFYQNKFKYILVDEYQDTNCVQYELIRQLADKHKNLCV 241 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA + NI F DF I+LEQNYRST NIL AANA+++NN R Sbjct: 242 VGDDDQSIYGWRGADISNILEFEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKP 301 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLE 364 K L+TD GE I LY NE EA + +I K + + AILYR+NAQSRVLE Sbjct: 302 KVLFTDNETGEQIELYVVKNEYREADVIAAQISKDLSEYRRDYKDFAILYRTNAQSRVLE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E ++Q+S+PYR+ GG+RF+ER+EIKD +SYL++I N DD A R++N P RGIG ++D Sbjct: 362 EKMIQSSIPYRMLGGVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINIPKRGIGAASID 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 ++Q + D Q+ ++ + + Q L A + F LI+ L + + + + Sbjct: 422 KIQQAANDYQVNFYEVAKNIRQFGILGKTATEKVSVFANLIEELKELAQEENILALLQAI 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I + ++ + E RI N+ E V+ + + E+ + L FL L A Sbjct: 482 IVKTDYNNFLKETEPEDAADRILNVREFVSKAAAYVQSNEEAN---LNNFLEEITLVADV 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVG 602 D +AV LMTLHS+KGLEFP VF+ G+EEG+FPS MS + +LEEERRL YVG Sbjct: 539 DNYDQNSNAVVLMTLHSSKGLEFPVVFMPGLEEGLFPSHMSASDEDKTKLEEERRLCYVG 598 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 +TRA +KL + AE R YG+ PSRFI ELP E + ++ A+ + + + P Sbjct: 599 ITRAREKLYILQAEERMTYGQIKAVEPSRFIAELPAEVIRINKVFAS--KKYAKKNNYEP 656 Query: 663 MVENDSGYKL-----------------GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 ++D +K+ G V H FG+GT++ E + + F+ Sbjct: 657 TKKSDIEFKIWNPHKKMESTIIEDFVTGDIVMHRMFGKGTVIEKMKKKEDIFVTIKFESG 716 Query: 706 GIKWLVAAYARLESV 720 K L +A+L+ V Sbjct: 717 EFKKLNTKFAKLQKV 731 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 835 bits (2157), Expect = 0.0, Method: Composition-based stats. Identities = 289/776 (37%), Positives = 425/776 (54%), Gaps = 64/776 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L+ LNDKQ EAV AP +LVLAG GSGKTRVL HRIA+L+S + SP++I+AVTFT Sbjct: 9 SSILEGLNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLLS-QGVSPFNILAVTFT 67 Query: 64 NKAAAEMRHRIGQLMGT-----SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 NKAA EMR RI +L+G + +GTFH + R+LR + +F I D +D Sbjct: 68 NKAAREMRERIERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGISPNFVIYDDDD 127 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQA 176 Q+RL+K+ + + LDEKQ+ PR I+S K L P S G + ++ +VY+ Sbjct: 128 QIRLIKQALNEIGLDEKQYAPRSIQARISSAKSALLDPEDYSSQGVSSYFDEIAARVYRR 187 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ+ + VDF +LL++ LW + P ILQ YR+R+ +LVDE+QDTN QY I LL Sbjct: 188 YQQLLEINQAVDFDDLLMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQYMLINLL 247 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD+DQ IY WR A + NI F D+P A+ I LEQNYRS IL A+ + Sbjct: 248 TQEHRNIFVVGDEDQGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHI 307 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYR 355 I +N R KKLWT+ + G + + A++E DEA ++ I G ++ A++YR Sbjct: 308 ISSNRLRRPKKLWTNKSGGALVRVREAYDEQDEASYIAREISRLTSLGEYTYSDFAVMYR 367 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV-NTP 414 +N+QSR +EEA + +PY+I GG RF+ER+E+KD L+YLRLI N +D A+ R++ NTP Sbjct: 368 TNSQSRPVEEAFSRYRIPYQIIGGTRFYERREVKDVLAYLRLIHNPHDAASLRRIIENTP 427 Query: 415 T-RGIGDRTLDVVRQTSRDRQLTLWQACR---------------ELLQEKALAGRAASAL 458 + RGIG T+ + + ++LW A L+ L +A +L Sbjct: 428 SGRGIGKGTMKTLEDLASRAHISLWDAIEIALGIKSLEEVGAFLPNLEIPKLQSKAKESL 487 Query: 459 QRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 ++ + LI L ++ + L D ++ SG + E+ R+EN +L++ + Sbjct: 488 KQLVGLIYELREQRDILTLPHLIDTLLIKSGYASFL-SSGAEEDLERLENARDLISIAQD 546 Query: 519 FSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEG 578 ++ + E L FL AL++ + V L+TLH+AKGLE+ VFI+G EEG Sbjct: 547 YAAIDTSE---ALVEFLQEVALQSDVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGFEEG 603 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 + P S+D +EEE RLAYVGVTRAM+KL ++YA R ++G + PSRF+ +P Sbjct: 604 LLPHARSMDRESDIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVPSRFLANIPP 663 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVENDS------------------------------ 668 + ++ P +P + S Sbjct: 664 DLLDGSLPSLGRRGPGRLTSTTSPRTPSGSTYPGGARNYSGQSYRPFPSNSNFVSSSNLE 723 Query: 669 ----GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 YK G RVRH KFGEG ++ +E GE + ++V F K L+A+ ARL+ + Sbjct: 724 RIIQEYKPGDRVRHPKFGEGVVLKVEIQGEDAEVEVRFAAGSTKKLLASMARLQKI 779 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 283/735 (38%), Positives = 406/735 (55%), Gaps = 32/735 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L+ LN +QR+AV S LL++AGAGSGKT VL RIA L+ + P+ I+A+ Sbjct: 1 MAPTDLVSDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQ 119 TFTNKAA EM+ R+ L+G M V TFH R+LR + L +F I DS+D Sbjct: 61 TFTNKAAKEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLNSNFTIYDSDDS 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 RLL+++ K M+LD K++ PR I+ K+E + + +VY YQE Sbjct: 121 KRLLQQIAKDMDLDIKKFSPRVLGNKISGWKNELIGVDD----AVKEHKVIGQVYGFYQE 176 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 RA +DF +L+ ++ P + +YR RF ++LVDE+QDTN+ QY +I L G Sbjct: 177 RLRRANALDFDDLIGEVVRIFREHPDVTAYYRRRFRHVLVDEYQDTNHAQYEFISALVGK 236 Query: 240 TGK-VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 G + +VGD DQSIY +RGA + NI+ F DFP A TI LEQNYRST NILSAANA+I Sbjct: 237 DGTGLCVVGDADQSIYAFRGATIRNIREFERDFPNATTILLEQNYRSTQNILSAANAVIS 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 +N R K LWTD G I Y A E DEARF+ + I D E A++YR+NA Sbjct: 297 HNEHRGKKNLWTDQGAGPKIIGYVADREEDEARFIASTID---DRNLPYNEVAVMYRTNA 353 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SRV+E+ ++ +PYR+ GG RF+ER+E++D ++YLR++ N +D+ + R+VNTP RGI Sbjct: 354 ASRVIEDVFIRTGIPYRVVGGTRFYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTPRRGI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD+ L V + ++L++A R + + L R +A+ +F+ +++ L T + + Sbjct: 414 GDKALAFVTAFASRENISLYEAMRHVDEVDYLGARGRNAIAKFVAMMEELRAGTQE--VG 471 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL-MPLQAFLSH 537 + + SG R E+ K + + R++NL ELV R F+ D +QAFL Sbjct: 472 DLINLITDVSGYRDELEKSKDPRDEARLDNLNELVAYARDFAQQARANDEDDSVQAFLER 531 Query: 538 AALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L A Q D Q V LMTLH+AKGLEFP VF+ G EEG FP SL +EEER Sbjct: 532 VSLVADADQIPDAGQGVVTLMTLHTAKGLEFPYVFLPGWEEGQFPHMRSLGNTEEIEEER 591 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA-------- 648 RLAYVG+TRA ++L ++ A R +G + SRF+G++P +E R Sbjct: 592 RLAYVGITRARKQLFISRALLRIAWGNPQTNPESRFLGDIPSSLIEWEREEPAYGVGGGY 651 Query: 649 -----------TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 R + + +G V H K+G GT+ + G G+H+ Sbjct: 652 SSYGGNDGWIGGPRRVKKKPASSQSVPASSLKLAVGDMVNHEKYGVGTVREVSGIGKHTT 711 Query: 698 LQVAFQGQGIKWLVA 712 + + F G L+ Sbjct: 712 VTIDFGSHGTIRLML 726 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 285/758 (37%), Positives = 408/758 (53%), Gaps = 42/758 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D S +LD LN QR+AV A +LVLAG GSGKTRVL R+A+L+ V P+ I+AVT Sbjct: 3 DASTILDGLNPAQRQAVTAAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVT 62 Query: 62 FTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAA EMR R+ +L+G + VGTFH + R LR + +DF I D++DQL Sbjct: 63 FTNKAAREMRDRLEKLLGPGEAAALTVGTFHSICARFLRRDSIHLGRERDFAIYDTDDQL 122 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 R++KR+++ +NLDEK+ PR I+ K+E + P + + E+ + + YQE Sbjct: 123 RVMKRVLRDLNLDEKKHAPRAIHAAISRAKNELIDPDAYSRHAHSYFEEVVARCFARYQE 182 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +LL+ L+ P +L+ Y+ER+ +L DE+QDTN QY ++ LA Sbjct: 183 LLRGANALDFDDLLVETVRLFEEHPAVLERYQERYGFLLADEYQDTNRAQYVLLKQLASR 242 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD+DQS+Y +RGA + NI F D+P A+ I LEQNYRST IL A A+I Sbjct: 243 HHNIFVVGDEDQSVYAFRGADIRNILSFERDYPEAQVILLEQNYRSTQAILDVAQAVINR 302 Query: 300 -NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSN 357 R K+LWT +G + + +++ +EA+ V I G + AI+YR+N Sbjct: 303 SAQRRRDKRLWTRNGEGVLVQVIEGYDQDEEAQLVAGEIARLIAGGAYQPGDIAIMYRTN 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR +EEAL+ PY I GG RF+ER+EIKDAL+YLRL N DD + RV+N P RG Sbjct: 363 AQSRAIEEALIARQAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNWPARG 422 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEK----------------ALAGRAASALQRF 461 IG RT + + + + + L+ L + RA +AL F Sbjct: 423 IGQRTQEDLERRAGAAAVPLYVMLHTLAANAEAAADQTTSPAPARTGEMPSRARNALLGF 482 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKG-EKGQTRIENLEELVTATRQFS 520 + LID + L D + + G R +E G E+G R N+ EL Q++ Sbjct: 483 LTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEEGDDRWNNVMELRNVAEQYA 542 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 L FL AL + ++AV +TLH AKGLEFP VF+VG+EEG+ Sbjct: 543 DLPL---ASQLSTFLEEVALVSDIDTLQEERNAVTCITLHQAKGLEFPVVFLVGLEEGLL 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 P S D+ L+EERRL YVG TRA ++L L +A R YG+ PSRF+ ++P + Sbjct: 600 PHARSADDRDALDEERRLFYVGATRAKERLYLLHAFRRATYGRTEIATPSRFLHDIPPDL 659 Query: 641 VEEVRLR------------ATVSRPVSHQ------RMGTPMVENDSGYKLGQRVRHAKFG 682 ++ R A + P +Q P + GQ+V HA+FG Sbjct: 660 LQRAPKRGYAAAQMVTGRAAALRNPRRNQAAPVSPHSAAPDGPRAISFFAGQKVHHAQFG 719 Query: 683 EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 EG +V+ + + VAF G+G+K L+A++A L+ V Sbjct: 720 EGIVVSSKLVEGDEEVTVAFVGKGVKRLLASFANLQHV 757 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 267/715 (37%), Positives = 404/715 (56%), Gaps = 24/715 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +DV+ +L LN +QR+AV LLV+AGAGSGKT VL RIA+L++ + + I+A+ Sbjct: 2 LDVTDILRGLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAI 61 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G +W+GTFH + R+LR +F ILDSEDQ Sbjct: 62 TFTNKAAREMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQE 121 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 L+++ + + D K R I+ K+EG + + NP + +V + Y + Sbjct: 122 ALVQQCLLDLGYDLKTHDARSIKHRISQWKNEGAT--RVVNESNPSDLIADRVMELYNKR 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +L+ L + Y+E+F ++LVDE+QDTN IQ+ +RLL Sbjct: 180 LFAANAMDFDDLIGHTVRLLEQNDDLRDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKH 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGD DQ+IY WRGA E++ RF DFP A+ + L +NYRST IL AAN++I +N Sbjct: 240 RNLCAVGDADQAIYAWRGADSEHMLRFERDFPDAKIVVLTRNYRSTQEILDAANSVIAHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+L + G+ + + EA +V I+ NGG +CA+LYR+NAQS Sbjct: 300 PRRRPKELRSTRGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRNGGRYEDCAVLYRANAQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EE LL+ ++PY + GGM F++R+E+KD L+YLR++ N D+ + R++N P RG+GD Sbjct: 360 RAIEEKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRPKRGLGD 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +D + + + ++L++A +E L+ R A A ++F + LA M + Sbjct: 420 TAVDRLLEFAHAEGMSLYEALAH-GEEAGLSERTAEAARQFHASLQELALWMEGMAVSEF 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 V+ + R MY + ++ R+EN++EL + TR F + FL+ +L Sbjct: 479 LAEVLHATRYREMYLESGKKEDLARVENIDELFSVTRSFDERRGG----TVAEFLAEVSL 534 Query: 541 EAGEG-QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 + + D + +V+LMTLH++KGLEFP VF+VGMEEG+FP S+D+ R+EEER L Sbjct: 535 LSDIDKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMDDPLRIEEERNLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRAM +L LT+A R LYG+ V PSRF+ E+ E+ V V L + V Sbjct: 595 YVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAEALEPEV----- 649 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QGQGIKWLVAA 713 + G RV H + G+G ++++E R+QV F G+KW+ Sbjct: 650 ----------LRPGDRVVHPQHGQGIVLSVESHAGEERVQVMFHPSIGMKWVSKK 694 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 830 bits (2145), Expect = 0.0, Method: Composition-based stats. Identities = 257/732 (35%), Positives = 431/732 (58%), Gaps = 23/732 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LNDKQ+EAV + LLV+AGAGSGKTRVL IA+L+ +N +P +I+A+TFTNKA Sbjct: 3 LSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI L+ +W+GTFH + R+LR + +F I D+ DQ L+K + Sbjct: 63 ANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVKEI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--EQTWQKVYQAYQEACDRA 184 I +N + P++A+ I+ K++ + P + ++ + +Y+ Y++ Sbjct: 123 INDLNYKD-DISPKEALNLISYCKNKSISPKEFLNINTFYAKQEEYYNIYKNYEKKKFEY 181 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L+ EL+ + L++Y+++F + VDE+QDTN QY I+ + V Sbjct: 182 NSLDFDDLILKTLELFAEDSNTLKYYQDKFEYLFVDEYQDTNKSQYELIKFIGKGHNNVR 241 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIY +RGA + NI F DF A+TI+LE+NYRSTSNI++ AN LI+NN+ R Sbjct: 242 VVGDADQSIYSFRGADINNILDFEKDFKDAKTIKLEENYRSTSNIINVANKLIKNNSERK 301 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT DG + + E +E +FV++ I + ++G L + AILYR NAQSR+ E Sbjct: 302 EKNLWTSKNDGSEVLYKKSSVESEEGKFVIDEINSLLNDGYRLKDMAILYRMNAQSRIFE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P +GIGD+T++ Sbjct: 362 EYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKILVNPKDDISLKRIINEPKKGIGDKTVE 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + + + +L + + L + S+ ++F + + D + + + Sbjct: 422 KLEKEANKLGFSLTELVCDPSLFSNLPSKLKSSCEKFYNPLAEIFDNYKDYDIVELIEEI 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + SG E+ + ++RI+NL E +++ ++ N +++ + +L + +L + Sbjct: 482 LDKSGYIRALEESYSVENRSRIDNLNEFISSAAEYQSNNPEDN---IHDYLENLSLLSDL 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + + D++ LMT+HSAKGLEF F+VGM+EG+FPS+ S+DE G +EEERR+ YV +T Sbjct: 539 DKTEDKDDSISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSIDE-GNIEEERRICYVAIT 597 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RAM+KL L+ AE RR +G+ VY++PSRF+ E+ + + + P + + Sbjct: 598 RAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQDKTPAYSPYVKMKSNEAYM 657 Query: 665 ENDSG----------------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 + + +++G ++ H K+GEG IV ++ S + + L VAF +G+K Sbjct: 658 RDKARESVLKKNTVKESSKEDFQIGDKIIHTKWGEGMIVQVKKSDDGNELVVAFDKKGLK 717 Query: 709 WLVAAYARLESV 720 L YA ++ + Sbjct: 718 KLNQDYAPIKRI 729 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 829 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 265/734 (36%), Positives = 424/734 (57%), Gaps = 25/734 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN QR+AV LLVLAGAGSGKTRVL IA+L+ +N P +I+A+TFTNKA Sbjct: 3 LDGLNKMQRKAVLHDEGPLLVLAGAGSGKTRVLTTSIAYLIEEKNIDPRNIIAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI +L+G +W+GTFH + R+LR + ++F I D+ DQ L+K + Sbjct: 63 ANEMKERISKLLGMDVSHLWIGTFHSICARILRMNIDKIGYDRNFTIYDTSDQKTLIKEI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ--TWQKVYQAYQEACDRA 184 I + + PR A+ I+S K++ L P + + ++Y+ Y+E Sbjct: 123 INELGYKD-DIAPRDALNVISSAKNKSLDPDEFLKLNTYYSKGDIYYEIYKKYEEKKFYY 181 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+ + L++ L Y+++F + VDE+QDTNN QY I+ AG V Sbjct: 182 NALDFDDLIDKVLYLFVRSKETLDFYQKKFEYVFVDEYQDTNNSQYELIKYFAGFHNNVT 241 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIY +RGA + NI F DF AETI+LEQNYRST NIL AN LIENN+ R Sbjct: 242 VVGDADQSIYSFRGANISNILNFEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERK 301 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+LWT+ G+ + E +EA+FV++ IK+ G + AILYR+NAQSR E Sbjct: 302 DKELWTENKGGDRVIYKANSVESEEAKFVLDNIKSLMQEGYDAKDFAILYRTNAQSRPFE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P RGIG+++++ Sbjct: 362 EILMKNLLDYKVVGGLKFYDRKEIKDLVSYLKILVNPKDDLSLKRIINEPKRGIGNKSIE 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 +++ + + + + ++ R + ++F + + + + + V Sbjct: 422 ELQRVANLHNIAILDLITDDSFNTLISDRIKKSTEKFYLPLREIFDNVDNYKIVDLIEDV 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + SG E + + RI+N+ E +++ ++ N +++ + +L + +L + Sbjct: 482 LDKSGYMKSLESSYSVEDRARIDNINEFISSASEYQENNPEDN---IYDYLENLSLLSDL 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + ++ +++ LMT+H+AKGLEFP VF+VG++EG+FP + S+DE G +EEERRL YV +T Sbjct: 539 DKTESTDNSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRSIDE-GNIEEERRLFYVAIT 597 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG---- 660 RA +KL L+ AE RR YGK V+++PSRFI E+ + E ++ + +++ Sbjct: 598 RAQEKLFLSSAEARRNYGKPVFYKPSRFIDEIIDNIKVEEKISSYGYSSREYEKTMAEDY 657 Query: 661 --------------TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 +D YK+G R+ HAK+G G +V ++ + + L VAF +G Sbjct: 658 MREKTRQSVLGKKLNKTSASDDEYKVGDRIVHAKWGSGMVVQIKKQDKGNELVVAFDEKG 717 Query: 707 IKWLVAAYARLESV 720 +K L YA +E V Sbjct: 718 LKKLNQDYAPIEKV 731 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 828 bits (2140), Expect = 0.0, Method: Composition-based stats. Identities = 270/750 (36%), Positives = 426/750 (56%), Gaps = 37/750 (4%) Query: 1 MDVSYL-------LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCS 53 M S++ LD+LN++QR+AV +L++AGAGSGKT+ L RIA+++ + Sbjct: 1 MSFSFIRGVWMSYLDTLNERQRQAVEQIEGPVLIMAGAGSGKTKALTCRIAYMLE-QGIR 59 Query: 54 PYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN-LPQDFQ 112 P +I+A+TFTNKAA EMR R+ L+G +W+ TFH R LR + F Sbjct: 60 PQNILAITFTNKAAQEMRERVHHLVGAEADKLWMYTFHSFGARFLRREINNHPPFTDKFT 119 Query: 113 ILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTW 170 I DS+D +++K ++K +NLD+KQ+PPR I++ K+ P ++ GN + Sbjct: 120 IYDSDDSKQMIKNILKELNLDDKQYPPRNIQARISAAKNALQGPESFRAEASGNFYNEKI 179 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 VY Y + + +DF +LL +L I + +++ F IL+DE+QDTN+ QY Sbjct: 180 ADVYDLYDKYMKQNNALDFDDLLFATTKLL-ADETIRRRWQDHFHYILIDEYQDTNHAQY 238 Query: 231 AWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNIL 290 + +AG + + VGD DQSIY WRGA + NI F D+P A+ I+LEQNYRST IL Sbjct: 239 LMAKYIAGKSQNICAVGDADQSIYSWRGADLRNIMDFREDYPSAQIIKLEQNYRSTQTIL 298 Query: 291 SAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAE 349 +AANA+I+NN RL K+LWT+ G + Y A +E +EA F+V +K +N + Sbjct: 299 NAANAVIKNNVERLEKRLWTENNPGVHLQKYAASDEHNEADFIVESMMKEHGENHVPYGK 358 Query: 350 CAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFER 409 A+LYR NAQSRV+EE++++ + Y + GG RF++R EI+D L+YL+L+AN DD + R Sbjct: 359 MAVLYRMNAQSRVIEESMVKRGIAYTMVGGTRFYDRAEIRDMLAYLKLVANFRDDISLMR 418 Query: 410 VVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA 469 ++N P RGIG T+ + + S+ +++++ L +E + A + LQ+F LI + Sbjct: 419 IINVPRRGIGQTTMQKLSEFSKQGNMSMFEGIMSL-EESDIPVPARTKLQKFSALIFSFL 477 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM 529 + + + +++ D+ ++ +Q + Q+R ENL EL+ + F+ + + Sbjct: 478 NASTEGDVFTLIQKIMTDTEYLSVLQQSSDPQAQSREENLGELLNVAKDFTQEQPEG--- 534 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L FL AL + D V LMT+HSAKGLEFP V++ GM+EG+FP SL + Sbjct: 535 GLPEFLEKVALVNDVDSFEEQDDKVTLMTIHSAKGLEFPIVYMAGMDEGIFPGVRSLMDE 594 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR---- 645 LEEERRL YV +TRA +KL LT + R +YG+ + SRF+ E+P + ++E+R Sbjct: 595 TALEEERRLCYVAITRAKEKLYLTTSAVRTMYGQVKPYVESRFLKEIPVDLLDEIRGNSS 654 Query: 646 --LRATVSRPVSHQ--------------RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNM 689 R T+ R + Q + V+ +++G +V H +G+G + + Sbjct: 655 EAKRRTLIRSNNEQKSKWALSSAGIMNKPVAKKSVKARFDWQVGDKVSHRMWGKGQVAEV 714 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 GSG+H L++ F I+ ++ A+A +E Sbjct: 715 TGSGKHMMLKLIFPNDQIRQVMVAFAPIEK 744 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 827 bits (2138), Expect = 0.0, Method: Composition-based stats. Identities = 274/720 (38%), Positives = 412/720 (57%), Gaps = 12/720 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LN +Q EAV + LLVLAGAGSGKTRV+ +RIA+++++ P +I+A+TFTN Sbjct: 2 EWLKELNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RI +L+ MWV TFH ++LR + +F I D +D+ +LL Sbjct: 62 KAADEMKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 K +N+DE++ + I++ K+ + P + GN V+ +VY+ Y + Sbjct: 122 KECFTKLNIDEEKLELKFVSRLISNFKNMLVGPSDVYKEGN-VDPRVVEVYRLYNKLLKE 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +LL L+ P IL+ Y+ +F ILVDE+QDTN+ Q+ I LL+ + Sbjct: 181 YNAFDFDDLLYYTIMLFKTNPDILEKYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNI 240 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA V NI F N FP A+ I+LE+NYRST ILSAAN +I+NN R Sbjct: 241 CVVGDDDQSIYSFRGADVRNILEFENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNR 300 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LWTD +GE I LY AF+E+DEA FV IK G +E ILYR+NAQS Sbjct: 301 KPKRLWTDNNEGEKIYLYPAFDEVDEANFVSMSIKNLIQGGIKPSEIGILYRTNAQSLNF 360 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E AL S+PY++ G +RF+ER+EIKD ++YLRLI N +D+ + RV+N P RGIG T+ Sbjct: 361 ENALSSHSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVPKRGIGPSTV 420 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + ++ S + ++ ++ +E + R + L F+ L++++ E + + Sbjct: 421 EKIKVLSDEYGISAYRLLKERGDFE-FDRRTYAKLYDFILLLESMRTEAESKSVVEVIEL 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 V+ + K E+ R +N+E+L++A F ED+ LQ FL+ L Sbjct: 480 VLDKTKYMESLLSSKNEEDFQRAKNIEQLISAAAMFEEENEDK---SLQNFLNSITLSFE 536 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE---GGRLEEERRLAY 600 E +D V LMT+H+AKGLEF VF+ G+EEG+FP S E LEEERRL Y Sbjct: 537 EDDGQ-KEDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLLRSEGEIELQNELEEERRLCY 595 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V +TRA + L LTYA RR++G+ + S FI E+P + ++++ ++++ Q + Sbjct: 596 VAITRAKRFLVLTYANNRRVFGRFSSRQKSSFIDEIPIKYIQQIYTPLSITKSSGAQSIS 655 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G ++H KFG G ++++ S + + + + F+ G K L+ +YA L + Sbjct: 656 NTEDGIKKALAVGDIIQHKKFGIGKVLSV--SEDMNEVLIDFEKFGQKRLLLSYANLIKI 713 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 302/726 (41%), Positives = 413/726 (56%), Gaps = 29/726 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLN Q+EAV LV+AGAGSGKTR +VHRIA+L+ P I+AVTF Sbjct: 1 MSDLLSSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ +++G +WV TFH A R+LR + L F I D +DQ L Sbjct: 61 TNKAAGEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKVYQAY 177 LK ++K + L+ K P R + I K+ G + +VY+ Y Sbjct: 121 LKEVLKELELEAKPGPFRAMIDRI---KNRGAGLAEYMREAPDFIGGVPKDAAAEVYRKY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q G +DF +LLL EL+ P +L ++R I VDE+QDTN +QY RLLA Sbjct: 178 QSGLRMQGALDFNDLLLLTIELFEQHPEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLA 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G+ +M+VGD DQSIYG+R A + NI F D+PGA IRLE+NYRS+S+IL ANA+I Sbjct: 238 GERPNLMVVGDPDQSIYGFRSADINNILDFTKDYPGARVIRLEENYRSSSSILRVANAVI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 E N RL K L GEP+ LY A N +EA FV I G + A+LYR+N Sbjct: 298 EKNALRLEKVLRPTRPGGEPVRLYRAPNAREEAAFVAREIVKL----GNFQQIAVLYRTN 353 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+LEE L +A++P R+ G + FFER+EIKD L+Y R+ N D R+VNTP RG Sbjct: 354 AQSRLLEEHLRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPPRG 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ + + ++ T+++A R Q +Q F+ L+D L + + Sbjct: 414 IGATTVSRLVEHAQKTGTTVFEAFRVAEQV----ISRPQQVQAFVRLLDELIEAAFESGP 469 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 RV++ +G R +QE G+ R++N+EEL+ A + + E+E+ L FL Sbjct: 470 TAFFQRVLEQTGFREALKQE--PDGEDRLQNVEELLRAAQDW----EEEEGGSLSDFLDS 523 Query: 538 AAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 AL +A E Q D +AV LMTLH+AKGLEFP VF+VG+EE + P + SL LEEE Sbjct: 524 VALTAKAEEPQGDAPAEAVTLMTLHNAKGLEFPTVFLVGLEENLLPHRNSLHRLEDLEEE 583 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA ++L L+YAE R YGK Y RPSRF+ ++P++ ++EV V Sbjct: 584 RRLFYVGITRAQERLYLSYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVL 643 Query: 656 HQRMGTPMVEND-SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 Q P + +K G++VRH KFG GT+V G + V F G G+K L + Sbjct: 644 PQARPEPKPRTQLAEFKGGEKVRHPKFGSGTVVAAMGG----EVTVMFPGVGLKRLAVKF 699 Query: 715 ARLESV 720 A LE + Sbjct: 700 AGLERL 705 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 826 bits (2135), Expect = 0.0, Method: Composition-based stats. Identities = 293/735 (39%), Positives = 419/735 (57%), Gaps = 29/735 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ + DKQREA+ LL++AGAGSGKTRV+ RI +LMS SPY+I+A+TFTNK Sbjct: 3 FLEDVTDKQREAITHIDGPLLIVAGAGSGKTRVITRRIGYLMSE-GISPYNILAITFTNK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ + +S GMWV TFH + R+LR +DF I D+ DQL +K Sbjct: 62 AANEMAERVKKF--SSHKGMWVSTFHKMCSRILRKDIELLGYSKDFTIYDTVDQLNRIKS 119 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRA 184 ++ + +D W PR + I++ K++ + + + + Q K+Y+ Y Sbjct: 120 IMADLEIDTAHWKPRSIISSISNAKNKLIDHERFAATASDIYHQMVAKIYKKYDTMLKSG 179 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL++ EL +P +L Y+ERF IL+DE+QDTN +QYA RLLA + Sbjct: 180 NALDFDDLLIKTVELLKIRPDVLSSYQERFKYILIDEYQDTNFVQYAISRLLAQKYKNIC 239 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 + GD DQSIYGWRGA + NI F D+P A + LEQNYRST NIL AA+++I+ N R Sbjct: 240 VTGDPDQSIYGWRGADLRNIMDFEKDYPDARVVLLEQNYRSTKNILLAASSVIQKNKYRK 299 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K++WT+ GE I NE EA + I+ + NG E A+ YR+NAQSR LE Sbjct: 300 QKEIWTENEHGEKIKTIHCENEHSEAEEIAKTIRALRGNGIKYTEIALFYRTNAQSRTLE 359 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 AL A +PY I GG+ F+ R+EIKD L+Y+RL N DD+A ER +NTP RGIG T+ Sbjct: 360 IALRNAGIPYVIVGGVEFYRRKEIKDILAYIRLCVNPCDDSALERAINTPARGIGTTTVK 419 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 +++ + R+ TL+ A + + G++A+A++RF ELI L + + + Sbjct: 420 KIKEWAESRESTLFNAIGIVDAIHEVTGKSAAAIKRFYELIMVLRHM-PETSVEKTLKSI 478 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I +G + + ++ + RI N+EELV A ++ N D LQ FL AL + Sbjct: 479 IDKTGYIHFLRKSEEKESEDRIANVEELVNAAHEYDANHTDG---SLQGFLEEVALISDL 535 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + +AV LMTLH+AKGLEFP VFI GMEEG+ P S +EEERRL YVG+T Sbjct: 536 DTVEDLAEAVTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERRLCYVGIT 595 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RAM++L LTY + R YG+ + SRF+ E+ +C++ RL T + + + Sbjct: 596 RAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIHADCMD--RLDKTENHFSYEYQGKSNSW 653 Query: 665 ENDS-------------------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 END+ + G+ VRH FG G ++ M+GS E + ++V+F Sbjct: 654 ENDAVEACDVLSESDVFLSGNVRTFLNGEVVRHPVFGIGRVLEMQGSNEKASVKVSFNIG 713 Query: 706 GIKWLVAAYARLESV 720 G K L+ AYA+LE V Sbjct: 714 GTKNLMLAYAKLEKV 728 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 296/793 (37%), Positives = 415/793 (52%), Gaps = 84/793 (10%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL+ LN +QREAV S LL++AGAGSGKT VL RIA+L++ +P I+A+TFT Sbjct: 29 DALLEGLNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITFT 88 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLRL 122 NKAAAEMR R+ L+G MWV TFH R+LRA L +F I DS+D RL Sbjct: 89 NKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRRL 148 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH--IQSYGNPVE--QTWQKVYQAYQ 178 L + K + LD K++ R +I++ K+E + P + + +P E + KVY YQ Sbjct: 149 LTMISKDLELDTKRFSARLLATHISNLKNELVGPEEAVVAADQDPAELPRLIAKVYGHYQ 208 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + A +DF +L+ L P I ++YR RF ++LVDE+QDTN+ QY +R L G Sbjct: 209 QRLRAANALDFDDLIGETVALLQAFPQIAEYYRRRFRHVLVDEYQDTNHAQYMLVRELVG 268 Query: 239 DTG---------KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNI 289 G ++ +VGD DQSIY +RGA + NI+ F D+P A TI LEQNYRST NI Sbjct: 269 GAGESDHAVAPAELCVVGDADQSIYAFRGATIRNIEEFERDYPDARTILLEQNYRSTQNI 328 Query: 290 LSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALA 348 LSAAN++I N GR K+LWTD +GE I Y A NE DEA FV + I D G A Sbjct: 329 LSAANSVISKNTGRREKRLWTDSGEGELIVGYVADNEHDEASFVASEIDRLVDQGETKFA 388 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 + A+ YR+N SR LEE ++ +PY++ GG+RF+ER+E++D ++YLR++AN +D + Sbjct: 389 DIAVFYRTNNSSRALEEIFIRLGVPYKVVGGVRFYERKEVRDIVAYLRVLANEDDTVSLR 448 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK--ALAGRAASALQRFMELID 466 R++NTP RGIGDR V S R ++ A R+ + K L R+ A+ F+E++D Sbjct: 449 RILNTPRRGIGDRAEACVAVHSEHRNISFAAALRDGAEGKVALLNTRSQKAIASFLEMMD 508 Query: 467 ALAQET------ADMP-----LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTA 515 L D P + + V++ +G R + R++NL ELV+ Sbjct: 509 GLRALLPTPAADEDEPFELGDIGEVAEAVLERTGYRAELAASSDPQDGARLDNLNELVSV 568 Query: 516 TRQFSYN-------------------EEDEDLMPLQAFLSHAALEAGEGQADTWQDA-VQ 555 R+FS + E + D L AFL +L A Q D V Sbjct: 569 AREFSSDARNAAGLIDPDDEETAAMREGEPDPGSLAAFLERVSLVADADQLPDSDDGVVT 628 Query: 556 LMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYA 615 +MTLH+AKGLEFP VF+ G E+G FP +L + L EERRLAYVG+TRA Q+L LT A Sbjct: 629 MMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARQRLYLTRA 688 Query: 616 ETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR----------------------- 652 R +G+ + + SRFI E+PE+ + R Sbjct: 689 IMRSAWGQPIQNPASRFIQEIPEDLINWRREDPGTGGGFGSGRPGYGSGSRYGSQGGQGY 748 Query: 653 -------------PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 + N G RV H K+G GT++ +G+G + + Sbjct: 749 GGGQNYGGGSGKAASTPSFGAARGRNNVLVLATGDRVSHDKYGLGTVLETKGTGPTATVT 808 Query: 700 VAFQGQGIKWLVA 712 + F G L+ Sbjct: 809 IDFGSAGKVRLML 821 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 305/816 (37%), Positives = 422/816 (51%), Gaps = 100/816 (12%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L++ LN QREAV S LL++AGAGSGKTRVL RIA L+ P I+A+TFTN Sbjct: 117 ELVEGLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTN 176 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAAAEMR R+G+L+G MWV TFH R+LR A L F I DS D LRL+ Sbjct: 177 KAAAEMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLIT 236 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP----HHIQSYGNPVEQTWQKVYQAYQEA 180 + K + LD K+ PR I+S K++ + P +S NP E+T ++Y Y E Sbjct: 237 TIAKDLQLDTKKHAPRALASRISSLKNDLVDPIDFADQAESAKNPFERTLAQIYTNYTER 296 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD- 239 +A VDF +L+ L P I + YR RF ++LVDE+QDTN QY +R L GD Sbjct: 297 LRQANAVDFDDLIGLTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDD 356 Query: 240 -TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST NIL+AAN++IE Sbjct: 357 PHASLTVVGDSDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQNILAAANSVIE 416 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N GR K LWTD +GE I+LY A +E EAR++ +I D+G + AI YR+NA Sbjct: 417 ENEGRRKKNLWTDQGEGEQITLYVADDEQAEARYIGRQIDALVDDGRRAGDIAIFYRANA 476 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LE+ L++ +PYR+ GG RF+ER+EIKDA++YL+++AN D+ R++N P RGI Sbjct: 477 QSRALEDQLIRIGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVPKRGI 536 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPL 477 GDR V + ++ +A R + +A R+ +A++ F+ +++ L Q AD Sbjct: 537 GDRAEAAVAMLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGP 596 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV------------------------ 513 + +++ SG + + ++R+ENL ELV Sbjct: 597 AELLEAILQRSGYYAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEA 656 Query: 514 -----------------------TATRQFSYNEEDEDLMPLQA-FLSHAALEAGEGQADT 549 + D+ L FL +L A Q Sbjct: 657 DAPATDTPGTEAPETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPG 716 Query: 550 WQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 +D V LMTLH+AKGLEFP VF+ GME+G FP +L + LEEERRLAYVG+TRA + Sbjct: 717 EEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRLAYVGITRARE 776 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL---------------------- 646 KL LT A+ R L+G+ + SRF+ E+PE ++ R Sbjct: 777 KLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARAGSTLSGAGFGGGYGSGGYGGGS 836 Query: 647 ---------------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 R+ + RP E +G R+ H FG GT Sbjct: 837 YGGQGSGSRRGPSFSGGIGGGRSDIKRPSLGSGRKATPAEKLPQLVVGDRITHDSFGMGT 896 Query: 686 IVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLESV 720 + + G GE ++++V F+ G K LV YA + + Sbjct: 897 VTEVAGQGEKTQIEVQFKAPHGTKRLVLRYAAVTKL 932 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 822 bits (2124), Expect = 0.0, Method: Composition-based stats. Identities = 289/727 (39%), Positives = 401/727 (55%), Gaps = 56/727 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVE--------------- 50 LL LN++QREAV + LL+LAGAGSGKTRV+ HRIA L+ Sbjct: 5 LLSGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPPGLTA 64 Query: 51 ---------------------------NCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG 83 P+ I+A+TFTNKAAAEMR R+ QL+G Sbjct: 65 DDLEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVGPRAR 124 Query: 84 GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAM 143 +W TFH R+LR ++F ILD+EDQ +++ +K + L E+Q+ P + Sbjct: 125 EVWAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQPGAVL 184 Query: 144 WYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN 202 I++ K+ L P G+ Q KVY YQE +DF +LLL+A EL Sbjct: 185 GTISNAKNAMLDPRRFADRAGDYWRQQVAKVYALYQEQLRSGNALDFDDLLLKAVELLER 244 Query: 203 KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVE 262 + ++Y+ +F ILVDE+QDTN++Q W+ LLAG+ + +VGDDDQ IY WRGA + Sbjct: 245 FDDVREYYQRKFEYILVDEYQDTNHVQNRWVFLLAGEKQNLAVVGDDDQGIYSWRGADIS 304 Query: 263 NIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYC 322 NI F FPG TI+LEQNYRST NILSAA A++ +N GR K+LWT G+P+ + Sbjct: 305 NILEFEAQFPGCRTIKLEQNYRSTQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPVYHFT 364 Query: 323 AFNELDEARFVVNRIKTWQDNGGA------LAECAILYRSNAQSRVLEEALLQASMPYRI 376 A +E DEA FV ++ G + A+LYR++AQSR LEEA+++ S+PY I Sbjct: 365 AADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVLYRTHAQSRALEEAMVRRSIPYGI 424 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 YGG+RFFER+EIKD L+YLR+IAN D +F R V P RGIG T+D + + Q+ Sbjct: 425 YGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVPKRGIGPATVDKLVDYAEQWQVP 484 Query: 437 LWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQ 496 + A + L+G ++ F LI+ L +A + D V++ +G+ Sbjct: 485 VALAALDCSMVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLERTGILEELRA 544 Query: 497 EKGEKGQTRIENLEELVTATRQFS--YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAV 554 + + R+EN++EL + +F EE + L L +FL+ AL Q Q+ V Sbjct: 545 DTSLEAAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEGQNKV 604 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+VG+EEG+FP +L + ++EEERRL YVG+TRA +L LT Sbjct: 605 TLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALTDEVQMEEERRLCYVGMTRARLRLYLTN 664 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQ 674 A +R L+G+ Y+ PSRF+ E+P E VEEV A S P E+ G Sbjct: 665 AVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGPRRSAWDDGAAWED-----AGA 719 Query: 675 RVRHAKF 681 VR + Sbjct: 720 AVRRPAW 726 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 5/59 (8%) Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAY 714 Q+ P E ++ G RVRH +FGEG + + G + V F G G + LVA+Y Sbjct: 762 QKALEPPSEETPQFQPGDRVRHERFGEGVVKAVIGD----TVTVQFAGAAGQRVLVASY 816 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 341/724 (47%), Positives = 487/724 (67%), Gaps = 10/724 (1%) Query: 1 MDVSYLLDSLNDKQREAVA-APRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M++S + + LNDKQ ++V N L+LAGAGSGKTRVL HRIA+L++ ++ +I+A Sbjct: 1 MNLSEITNDLNDKQCQSVTFNNEKNALILAGAGSGKTRVLTHRIAYLITQKDIRIDAILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 VTFTNKAA EMR R+ L+ MW+GTFH LAHRLLR H+ + L FQILD++DQ Sbjct: 61 VTFTNKAATEMRERLSTLLRRPIQSMWMGTFHSLAHRLLRTHYEKSKLTSGFQILDAQDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 R++KRL+K ++DE ++P ++ W+IN+QK+E +R I N + +V++ Y+ Sbjct: 121 FRIVKRLMKENSIDESKFPIKKVQWFINNQKNEDIRAQDIDPDYNYFIKKNLEVFELYEA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C L+DFAELL+R++EL N +L HY+ RF +ILVDEFQDTN +QY WI+LL Sbjct: 181 YCQENDLIDFAELLIRSYELLKNNTDLLNHYQARFEHILVDEFQDTNTVQYKWIKLLFNG 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 K+ VGDDDQSIYGWRGA++ENI + DF ETIRL+QNYRST NIL+A+NALI + Sbjct: 241 HNKIFCVGDDDQSIYGWRGAKIENITKLCTDFTPIETIRLKQNYRSTGNILNASNALITH 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R+GK LWTD +GE I +Y A E DEA +V++ I+ NG + ++C+ILYR NAQ Sbjct: 301 NVNRMGKSLWTDAGNGELIDVYEARTETDEANYVISNIQKLITNGASPSDCSILYRFNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+ EEAL++ ++PY IYGG++FFE EIKDALSYLRLI N D+ AFERVVN PTRGIG Sbjct: 361 SRIFEEALIKYNIPYIIYGGLKFFEYTEIKDALSYLRLIENSADNVAFERVVNFPTRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + T+ +R ++D +L+QA ++ L RAA+AL F+ LI + +T + L Sbjct: 421 NVTVKKIRTFAQDNHTSLFQAAIQISSI--LPTRAANALSSFINLIKQITDDTKHLNLSE 478 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + ++ SGL Y +K ++ ENL++L+T T+Q+++ E+D + + F+S + Sbjct: 479 KVTNLLNTSGLIMHY---SNDKIGSKKENLKKLITITKQYNH-EQDNKMSEVMGFISLTS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L++ + VQLMT+HSAKGLEFP VF+VGMEE +FPS+ S +E +EERRL Sbjct: 535 LDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEEDLFPSRQSKNEPHLTDEERRLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR--ATVSRPVSHQ 657 YVG+TRAM+KL+L+YA R LYG+ +Y PSRF+ E+P + + +++ + AT+ Sbjct: 595 YVGMTRAMKKLSLSYAIKRFLYGQSLYAYPSRFLNEIPSKYLNKIKAKFGATIQNYNDDN 654 Query: 658 RMGTPMV-ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 + ++D +G V+HAKFG GT++N EG G+ +R+Q+ F+ G KWL+ +YA Sbjct: 655 TFNKNITPKSDDQISIGALVKHAKFGLGTVLNFEGQGDSTRVQIKFKQVGTKWLINSYAN 714 Query: 717 LESV 720 LE + Sbjct: 715 LEFI 718 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 303/766 (39%), Positives = 425/766 (55%), Gaps = 66/766 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L LN +Q+E V LLVLAGAG+GKT L R+A+L+ P I+AVTFT Sbjct: 17 PDYLARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQILAVTFT 76 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ R+G L+G+ M W+GTFH +A ++LR H L DF ILD++DQ+RL Sbjct: 77 NKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDFIILDTDDQIRL 136 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEA 180 LK+LI+ +DEKQWP +Q I+ K+ GL P I + + + +Y AYQ+ Sbjct: 137 LKQLIQGQGIDEKQWPAKQLAGIIDRWKNRGLTPDKIAGKEEDSFADGQGAALYLAYQKR 196 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +LLL + +L Y +RF I+VDE+QDTN QY W+RLLA Sbjct: 197 LLSLNACDFGDLLLHMLVILTQHREVLDSYHDRFRYIMVDEYQDTNQAQYLWLRLLAQKN 256 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIY WRGA+V NI RF DFPGA+ IRLE NYRST IL AA+ LI +N Sbjct: 257 RNICCVGDDDQSIYSWRGAEVANILRFEEDFPGAKIIRLEHNYRSTPQILGAASGLITHN 316 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 N RLGK LWT+ GE + + ++ +EAR +V ++ + L + AIL R+ QS Sbjct: 317 NARLGKTLWTERDQGEKVKIIGVWDGAEEARQLVADVQNLRRANIPLNKMAILIRAQFQS 376 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + ++PYRI GG RF+ER EI+DAL+YLR+IA DD AFER+VN P RGIG Sbjct: 377 REFEDIFIAKNLPYRIIGGFRFYERAEIRDALAYLRVIAQPTDDLAFERIVNVPKRGIGK 436 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + ++ + Q + ++ L +A +L+ EK L + +L + M + + + Sbjct: 437 KAMEKLYQAAFLDRIPLAEAAEKLVSEKTLGSKITQSLGQLMNDFSEWRKSLSVVSHADV 496 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T +++ +SG + M + R+ENL EL A ++ L +FL H +L Sbjct: 497 TRKMLDESGYKAMLRAVNDVQSAGRLENLTELARAMEEYD---------DLGSFLEHVSL 547 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRL 598 D D + LMT+H+AKGLEF VF+ G EEG+FPSQ SLDEGG LEEERRL Sbjct: 548 VMDHEN-DPIDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLNSLEEERRL 606 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---VRLRATVSRPVS 655 AYVG+TRA + T+ +A RR+YG+ + PSRFI ELP++ +EE +R +A + R + Sbjct: 607 AYVGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDDHIEEKSLLRKKAPIWRDIW 666 Query: 656 HQRMGTPMVENDS------------------------------------------GYKLG 673 + N + YK+G Sbjct: 667 AEDRSKNPAYNSAKEAITPPWQLASRRGAGWQRAQKAAASPSPAVSHPLKKKDSPQYKIG 726 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ--GIKWLVAAYARL 717 V+HAKFG+G + ++G ++ V F + GIK L++ + L Sbjct: 727 DTVKHAKFGQGVVNEVDGD----KVTVEFHDKDVGIKKLLSQFVSL 768 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 325/745 (43%), Positives = 474/745 (63%), Gaps = 28/745 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L LN +Q++A N L+LAGAGSGKT+VL RIA+L + S +I+AV Sbjct: 1 MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++HR+ +++G S GMW+GTFHG+AHRLLR H + L ++F+ILD ++Q Sbjct: 61 TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +L+K++IK+++LD+K++PP+ +IN QKD+ +R + + + + +Y AY+E Sbjct: 121 QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQ---YDINYTHIYTAYEER 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DFA+LLL +EL+ + ++Y+ F IL+DEFQDTN +QY W++LL D Sbjct: 178 LLLDNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDN 237 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 +M VGDDDQSIYGWRGA V+NI +++ D E I+LEQNYRST NIL AN++I+NN Sbjct: 238 NYMMAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNN 297 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + R+ K+LW+ DGE + +YCA NE DEA++++++I+ D G ++ AILYRSN S Sbjct: 298 DNRMSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEE+ + S+PYRIYGG RFF+R E+KDAL+YLRL ND+ AFER++NTPTRGIG+ Sbjct: 358 RVLEESCIYTSIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGN 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +TLD +R S+ ++ WQA +++Q++ + R AS L +F+E+I+A++ + D+ L Sbjct: 418 KTLDTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKL 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE--DEDLMPLQAFLSHA 538 + VI +SGL Y+++ EK + +I+NL+EL++A + F E D++ LQ FLS A Sbjct: 478 LETVINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFA 537 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP------------SQMSL 586 LEAGE QAD D+VQLMT+H++KGLEF VF+V EEG+FP S S Sbjct: 538 VLEAGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESK 597 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV-- 644 +L EERRL YV VTRAM+ LT++YA+ R ++G+ + SRF+ E+ E + E Sbjct: 598 KIQEKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKL 657 Query: 645 --------RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 +L+ + VS + +K G +V H FG+G V + G Sbjct: 658 TVGSQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKE 717 Query: 697 RLQVAFQ-GQGIKWLVAAYARLESV 720 V F G K L+A A L V Sbjct: 718 FYTVDFGVDVGQKILLADIANLVKV 742 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 815 bits (2107), Expect = 0.0, Method: Composition-based stats. Identities = 298/741 (40%), Positives = 417/741 (56%), Gaps = 27/741 (3%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ LL LN+ QREAV LL+LAGAGSGKTRVL HRIA+L+ P I+A+T Sbjct: 9 DLDALLAGLNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAIT 68 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EMR R+ L+G MWV TFH R+LRA + F I D D R Sbjct: 69 FTNKAAQEMRERVEMLVGRRTRAMWVMTFHSACARMLRADAHRLGYTRQFTIYDQSDARR 128 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEA 180 L+KR I+ +++D K++ P I+ K++ G+ EQT VY+ Y+ Sbjct: 129 LVKRAIEELDVDPKRFTPGAIHHEISDAKNKLRDAEAYAQMVGSFFEQTVADVYKLYESE 188 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 R +DF +LL+RA + P + + Y + F ++LVDE+QDTN++QY W++L+AG+ Sbjct: 189 LHRMNAMDFDDLLVRAVNVLELFPEVRRRYADNFRHVLVDEYQDTNHVQYRWLQLIAGEH 248 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIYG+RGA + NI F +DFP A+ ++LEQNYRST IL AANA+I NN Sbjct: 249 RNLAVVGDDSQSIYGFRGADIRNILDFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRNN 308 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 G+ K+LWTD G+PI + +E EARFV I+ D G + E A+ YR+NAQS Sbjct: 309 RGQREKELWTDLGIGDPIKVRELDDEHAEARFVAGEIERIVDEGVSRNEIAVFYRTNAQS 368 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLE+ L++A + Y++ GG +F+ER EIKDA++YL ++ N D +F R+ N+P RGIG Sbjct: 369 RVLEDTLVRAQIGYQVIGGTKFYERAEIKDAIAYLTMLVNPQDVVSFTRIANSPRRGIGQ 428 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHV 479 +L V + +T+W+A E L A + RFM + L + A+ P+ Sbjct: 429 TSLSRVISWANTAGITIWEAALEPDSVPGLGTAARKSFHRFMGAMRILGERAAANPPVSE 488 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQAFLSHA 538 V+ +SG E ++ + Q RIENLEELV ++ + + E+ L FL Sbjct: 489 LLKEVLSESGYLEALEADRTIESQGRIENLEELVNVAAEYDGSVDLREEAPSLAGFLQQI 548 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + V LMTLH+AKGLE+P VF++G EEG+FP Q +++EGG EE R L Sbjct: 549 ALVADADGRRDDEGLVTLMTLHNAKGLEYPIVFLLGCEEGVFPHQRAIEEGGLEEERR-L 607 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE----------VRLRA 648 AYVG+TRAM+ L +TYA TR ++G Y SRF+ E+P + R RA Sbjct: 608 AYVGLTRAMRDLYMTYARTRAVFGSRSYGARSRFVDEVPIGLTDRNERPSLGVGSARERA 667 Query: 649 TVSRPVSHQ---------RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 T G Y++G V HA FGEG ++ +E G + Sbjct: 668 TSWSTPLGSGPIPGGGWDSGGGGGGGGGEAYRMGDDVVHAAFGEGVVIAVESGG---IVV 724 Query: 700 VAFQGQG-IKWLVAAYARLES 719 + F G + LVA A +E Sbjct: 725 IRFARDGSERKLVADLAPIEK 745 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 308/789 (39%), Positives = 428/789 (54%), Gaps = 94/789 (11%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +D LN Q AV +L+LAGAG+GKTR L RIA LMS P I+AVTFTNK Sbjct: 30 YMDGLNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTFTNK 89 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+G L+G GM W+GTFH + +LLR H A L +F ILD++DQ RL+K Sbjct: 90 AAREMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTRLMK 149 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDR 183 +LI A +D+K+WP R I+ K+ L P + S + K+Y YQ Sbjct: 150 QLIIAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSADHGAFNHQGVKLYAQYQARLKA 209 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +LLL +++ + +LQ Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 210 LNACDFGDLLLHVIQIFQDNDDLLQQYQRWFRYILVDEYQDTNVAQYLWLRLLAAGHKNI 269 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+ +I N GR Sbjct: 270 CCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTGHILAAASGVIAGNTGR 329 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-----NGGALAECAILYRSNA 358 LGK LWTDG DGE + L ++ +EAR++ I+ AIL R++ Sbjct: 330 LGKTLWTDGEDGEKVRLIGHWDGDEEARWIGEEIEAMGKGTRGMEPIGPNSIAILVRASH 389 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q R E+ L +PYR+ GG RF+ER EI+DA++Y R++ + +DD AFER+VNTP RG+ Sbjct: 390 QMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPDDDLAFERIVNTPKRGL 449 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFME--------------- 463 GD+ +++ +R ++L + R ++ +A+ G+ L+ ++ Sbjct: 450 GDKAQQTIQRMARSNGVSLLEGARLCVETQAIGGKGGRELRTLVDGLARWRIQLTGALRA 509 Query: 464 --LIDALAQETAD------MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTA 515 D L +E AD + + ++ +SG + ++ +K +G R+ENL+ELV A Sbjct: 510 AGPSDDLIEEDADPSEVPKISHIELAEIILDESGYTSHWQNDKTPEGPGRLENLKELVKA 569 Query: 516 TRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGM 575 F LQ FL H +L + D + V LMTLH+AKGLEFP VF+ G Sbjct: 570 LENFEN---------LQGFLEHVSLIMD-NEQDDQEPKVTLMTLHAAKGLEFPAVFLPGW 619 Query: 576 EEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 E+G+FPSQ S+DE G+ LEEERRLAYVG+TRA + T+++A RR+YG+ PSRFI Sbjct: 620 EDGLFPSQRSMDESGQAGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPSRFI 679 Query: 634 GELPEECVE------------------------------------------------EVR 645 ELPE+ VE + R Sbjct: 680 DELPEDHVEVLTPPGLYGHQGSVSATASPVEREMAGSNLHEKAASADVYNSPGWRRLQAR 739 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 +R S + T E S + +G RV H KFG G +V++EG +L + F Sbjct: 740 QGQYGTRQPSEAKAMTIDAEAISAFTVGDRVFHQKFGYGEVVSVEGD----KLGIEFDKA 795 Query: 706 GIKWLVAAY 714 G K +V + Sbjct: 796 GSKHVVGRF 804 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 285/767 (37%), Positives = 406/767 (52%), Gaps = 49/767 (6%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 +V LLD LN +QR+AV S LL++AGAGSGKT VL RIA+L++ + I+A+T Sbjct: 13 EVDRLLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAIT 72 Query: 62 FTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDAN-LPQDFQILDSEDQ 119 FTNKAAAEMR R+ +L+G G MWV TFH R+LR L +F I D +D Sbjct: 73 FTNKAAAEMRERVARLVGDHTGPSMWVSTFHSTCVRILRNQASLIGGLNSNFSIYDVDDS 132 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH----HIQSYGNPVEQTWQKVYQ 175 LL+ + + M LD K++ PR I++ K+E + ++ S + + +T VY Sbjct: 133 RSLLQMIGQDMGLDIKRYSPRLMANAISNLKNELIDAESAVANLSSDTDDLARTVATVYG 192 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ A +DF +L+ + P I +HYR RF ++LVDE+QDTN+ QY +R Sbjct: 193 EYQRRLRTANALDFDDLIGETVGILQAFPQIAEHYRRRFRHVLVDEYQDTNHAQYVLVRE 252 Query: 236 LAGDTGK----------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 L G + + +VGD DQSIY +RG+ + NI+ F D+P TI LEQNYRS Sbjct: 253 LVGHGARNSPDDMPPGELCVVGDADQSIYAFRGSTISNIEDFERDYPDTTTILLEQNYRS 312 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG- 344 T NILSAAN++I N GR K+LWTD GE I Y + NE DEA+F+ + I G Sbjct: 313 TQNILSAANSVIARNFGRRDKRLWTDAGKGELIVGYVSDNEHDEAKFIADEIDALVGGGE 372 Query: 345 GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDD 404 + A+LYR+N SR LEE + +PY++ GG F+E +EI+D ++YLR++ N D Sbjct: 373 ITYDDVAVLYRANNLSRSLEEVFIPTGIPYKVVGGFCFYESKEIRDLIAYLRVLDNPGDA 432 Query: 405 AAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFM 462 + R++NTP RGIGDR V + + + A + + + K L R+ A+ F+ Sbjct: 433 VSMRRILNTPRRGIGDRAEACVSVYAENTGTSFADALQAVAEGKVPMLNTRSVKAIAGFV 492 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 L+D L D L + V++ SG E + R++NL ELV+ +FS Sbjct: 493 ALLDDLRCRVDDD-LGELVESVLERSGYLRELESSTDPQELARLDNLNELVSFAHEFSTE 551 Query: 523 E-------------EDEDLMP---LQAFLSHAALEAGEGQADTWQDA-VQLMTLHSAKGL 565 + EDED+ L AFL +L + Q V LMTLH+AKGL Sbjct: 552 QANAAALAKSLHTPEDEDVPDTGALAAFLEKVSLMSDTDQIPENNSGVVTLMTLHAAKGL 611 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 EFP VF+ G E+GM P +L + L EERRLAYVG+TRA Q+L L+ A TR +G+ + Sbjct: 612 EFPVVFVTGWEDGMLPHMRTLGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWGQPI 671 Query: 626 YHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYK------------LG 673 + SRF+ E+P E ++ R T S S + G Sbjct: 672 LNPESRFLREIPPELIDWRRSILTDSYSTPASGASRFGRVRPSSIRSGASKRALLVLAPG 731 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RV H K+G G + + G GE + + F G L+ +A + + Sbjct: 732 DRVTHDKYGLGRVEEVSGVGESAISLIDFGSSGRIKLMHNHAPVTKL 778 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 273/690 (39%), Positives = 388/690 (56%), Gaps = 40/690 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN +Q +AV LL+ AGAGSGKTRVL RIAW++S + P I+A+ Sbjct: 135 VDAQKLLDGLNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRIAWILSQKGAWPSQILAI 194 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ +L+G+ MWV TFH ++LR L F I D+ D Sbjct: 195 TFTNKAAAEMRERLSKLIGSEANTMWVSTFHSACVKILRRSGQYIGLKSGFSIYDTSDCE 254 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPV------------- 166 RL+K + +N+D K++ PR + I+ K+ + + Y N Sbjct: 255 RLVKIIATELNVDIKRFTPRSILGKISDCKNSLITWREQLDMYANDYKPGVAGQQIAHAG 314 Query: 167 --EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQD 224 E + +Y YQ +A VDF +L++R +L P Q+YR +F ILVDE+QD Sbjct: 315 NSEAVYATIYAEYQHRLSQANAVDFDDLIMRTVQLMREVPEAAQYYRHKFRYILVDEYQD 374 Query: 225 TNNIQYAWIRLLAG-----------DTGK----VMIVGDDDQSIYGWRGAQVENIQRFLN 269 TN+ QY IR LAG + +VGD DQSIY +RGA + NIQ F Sbjct: 375 TNHAQYELIRELAGVDVKQNSANPSQQNNTPASITVVGDSDQSIYAFRGADIRNIQDFEK 434 Query: 270 DFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDE 329 DFP A TI LEQNYRST IL AANA+I +N GR KKLWT G PI+ Y A + E Sbjct: 435 DFPNATTIMLEQNYRSTQTILDAANAVISHNQGRKPKKLWTALGKGTPITGYAADSAQQE 494 Query: 330 ARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEI 388 A +V I + G A ++ AI+YR+NAQSR LE+AL++A +PY++ GG +F+ER+E+ Sbjct: 495 AAWVAQEIARLAGEEGVAYSDMAIMYRANAQSRSLEDALVKAGLPYQLVGGTKFYERREV 554 Query: 389 KDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK 448 KDAL+YL+ +AN +DD R++N P RG+G R ++ ++ + ++ WQA L + Sbjct: 555 KDALAYLQSMANPDDDVNMRRILNVPKRGLGARAEALLTLYAQTQGVSFWQALEHLESIE 614 Query: 449 ALAGRAASALQRFMELIDALAQ--ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 + R A+ L+ F EL+ L + D D ++ DSGL ++ + + R+ Sbjct: 615 GMPTRTATKLKEFRELMHNLITCMQNDDSKPSKVIDSILNDSGLLEDLQRSEDPQDAARV 674 Query: 507 ENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ---ADTWQDAVQLMTLHSAK 563 +NL +L + ++ N D + FL AL A Q + V LMTLH+AK Sbjct: 675 DNLSQLQSVAAEYEQNTPD---ASVAGFLETTALVADSDQLPDENEDTGKVTLMTLHTAK 731 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+P VF+ GME+G FP +L++ G L EERRLAYVG+TRA Q+L +T A R +G+ Sbjct: 732 GLEYPVVFLTGMEQGTFPHSRALEDDGELCEERRLAYVGITRAKQRLYVTRAAVRAQWGQ 791 Query: 624 EVYHRPSRFIGELPEECVEEVRLRATVSRP 653 PS+F+ E+P+ ++ R + V R Sbjct: 792 AQDMLPSQFLDEIPDNLIDWKRRESDVERW 821 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%) Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 N +++G ++ H +G GT++ + G +S + V F G+K L+ A +E + Sbjct: 969 NIQDFQVGDKITHDTYGLGTVLATQDKGRNSIITVDFGSDGVKRLMLRVAPIEKL 1023 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 283/753 (37%), Positives = 428/753 (56%), Gaps = 38/753 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN +Q EAV +L+LAGAGSGKT+ L RIA+L+ + PYSI+A+TF Sbjct: 1 MEDLLSSLNTQQAEAVKHVAGPILILAGAGSGKTKALTTRIAYLLE-KGVPPYSILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQ 119 TNKAA EMR R+ +L+G +W+ TFHG ++LLR F I D+ D Sbjct: 60 TNKAAKEMRERVDKLVGPLAKDVWLYTFHGFCNQLLRREIKHLSHYGYGTGFSIYDTTDC 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQ 178 +LK ++K + +DEK +P M I++ K+ L + + ++Y Y+ Sbjct: 120 KNVLKGILKDLKMDEKFYPLSAVMSVISNAKNAQLSSAAFARKADDFHAKKVAEIYLEYE 179 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + VDF +LLL + +L + + + Y+ +F +++DE+QDTN++QY +L++ Sbjct: 180 KRMRQNNAVDFDDLLLLSVDLLQHDRDVREKYQHKFQYVMIDEYQDTNHVQYLLAKLISA 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGD DQSIYGWRGA + NI F D+P A+ +LEQNYRST IL AANA+IE Sbjct: 240 PENNLCAVGDIDQSIYGWRGADISNILDFEKDYPDAKIYKLEQNYRSTQVILDAANAVIE 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSN 357 +N+ R K LWT+ +G+PI+ + AFN+ +EA F V+ ++ +D L + A+LYR+N Sbjct: 300 HNSARRPKNLWTENGNGKPITYFQAFNDRNEAEFTVHNMRRLRDEAHFHLGDMAVLYRTN 359 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+ EE L++ +PY + G ++F++R+E+KD L+YLRL+ N D+ A ERV+N P RG Sbjct: 360 AQSRMFEETLIKNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEPKRG 419 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T++ ++ + L+L +A + L GR+ + F L+++L +ET +P+ Sbjct: 420 IGSATVEKLKMLLNETGLSLHEALK-APSAGELLGRSLLKVTAFSTLLESLRKETDTVPV 478 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ +G E E+ + R++NL+EL +E+E+ L+ FL+H Sbjct: 479 EQLMTDILEKTGYWDALLLEGSEQARGRMDNLDELKRIA-MEFQEDENEEEKTLEDFLNH 537 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + A +DAV LMTLHSAKGLEFP VF+ GMEEG+FPSQ SLD+ +LEEERR Sbjct: 538 VALVSDIDDAKLSRDAVTLMTLHSAKGLEFPVVFMAGMEEGLFPSQRSLDDTDKLEEERR 597 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA +KL LT +R +YG+ V PSRF+ E+P +E + Sbjct: 598 LCYVGITRAKKKLFLTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETALVGQQDGSGAQRA 657 Query: 658 RMGTPMVENDS------------------------------GYKLGQRVRHAKFGEGTIV 687 E S +K G +VRH +G GT++ Sbjct: 658 AWENRPQEEGSGLRSIARRRGASILDRRDRRSEYVPDGKLEVFKAGDKVRHKAWGVGTVI 717 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + + + ++VAF G GIK L Y ++ V Sbjct: 718 SAQPDADGQIVKVAFPGTGIKALSTKYKVIQKV 750 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 280/792 (35%), Positives = 430/792 (54%), Gaps = 73/792 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-VENCSPYSIMA 59 M+ +Y+ D LN+ Q AV LV+AGAGSGKTRVL ++IA+L+ +P++I+A Sbjct: 1 MNTNYI-DELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILA 59 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKAA EM+ RI + +G + +W+GTFH + R+LRA F I D+ D Sbjct: 60 LTFTNKAAREMKERIARQVGMERARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTAD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ------- 171 LL+ +IK M LDEK + P I++ K+ + P + E Sbjct: 120 SKSLLRSIIKEMGLDEKTYKPGVVQARISNAKNHLVTPTGYAANKEAYEGDMAAKMPAIR 179 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 +Y Y + C +AG +DF +LL+ + L+ + P +L Y+++F +LVDE+QDTN Q++ Sbjct: 180 DIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTRYQDQFHYVLVDEYQDTNYAQHS 239 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I L + ++ +VGDD QSIY +RGA ++NI F +P + +LEQNYRST I+ Sbjct: 240 IILQLTKENQRICVVGDDAQSIYSFRGADIDNILYFTKIYPNTKVFKLEQNYRSTQTIVC 299 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAEC 350 AAN+LIE N ++ K ++++ GEPI ++ A+++++E V N+I + AE Sbjct: 300 AANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDVEEGDIVANKIAELRREYHYGYAEF 359 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+NAQSR+ EEAL + SMPY+IYGG+ F++R+EIKD ++Y RL+ N ND+ AF+R+ Sbjct: 360 AILYRTNAQSRIFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRI 419 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALA 469 +N P RGIGD T+ + + + ++LW A E L + + LQ F ELI+ Sbjct: 420 INYPARGIGDTTVGKIISAATNHGVSLWAAVCEPLSYGLDINKGTHAKLQGFRELIEGFI 479 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDED 527 + AD + +I+ SG+ Q+ + +R EN+EELV F EE Sbjct: 480 ADQADKNAYEIGTDIIRQSGIINDVCQDTSPENLSRKENIEELVNGMNDFCALRQEEGNP 539 Query: 528 LMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 + L FLS AL + + V LMT+HSAKGLEF VF+VG+EE +FPS M Sbjct: 540 NVSLTDFLSEIALLTDQDSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENLFPSGMVG 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV----- 641 D LEEERRL YV +TRA + L++A+TR YGK + PSRF+ ++ + + Sbjct: 600 DSPRALEEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRFLRDIDVDYLRLPHE 659 Query: 642 ---------------------------------------EEVRLRATVSRP--------- 653 + R +A + P Sbjct: 660 AGVSRAVDEGAGRFRREIEGGFARSTSPSRAPFGSNSSEQRERPKAQIIAPSVPRNLKKV 719 Query: 654 -----VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 S +M + + +G ++GQ + H +FG G ++ +EG+G++++ + F+ G K Sbjct: 720 SAVGGSSSAQMASSGSASVAGVQVGQMIEHERFGLGEVLKVEGTGDNAKATIHFKNAGDK 779 Query: 709 WLVAAYARLESV 720 L+ +AR + V Sbjct: 780 QLLLRFARFKVV 791 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 294/822 (35%), Positives = 416/822 (50%), Gaps = 114/822 (13%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN QREAV + LLV+AGAGSGKTRVL RIA+L++V P I+A+TFTN Sbjct: 34 ELLDGLNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTN 93 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ R+ L+G MWV TFH + R+LRA L F I D D RL + Sbjct: 94 KAAREMKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGLKTTFTIYDQADSQRLAQ 153 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDR 183 + +N+D K++P R I++ K+E + P ++ + KVYQ YQE Sbjct: 154 LVAGGLNIDTKKYPARMLAASISNLKNELIDPETALERADSDQATLVAKVYQGYQERLRA 213 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK- 242 A +DF +L+++ L P + +HYR RF ++LVDE+QDTN+ QY ++ L G T Sbjct: 214 ASALDFDDLIMQTVFLLQRHPAVAEHYRRRFRHVLVDEYQDTNHAQYLLVKALVGGTADE 273 Query: 243 ----------------------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLE 280 +++VGD DQSIY +RGA + NI F D+P A+TI LE Sbjct: 274 QEVRTADGELVRAAASEVPPAELVVVGDADQSIYAFRGATIRNIVEFERDYPNAQTIMLE 333 Query: 281 QNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW 340 QNYRST ILSAAN++I N R K LWT G I+ Y NE DEA+FV I Sbjct: 334 QNYRSTQTILSAANSVIARNPQRRAKNLWTAQGGGTRITGYVGDNEHDEAQFVGKEIDAL 393 Query: 341 QDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 D G A + A+ YR+N+ SR LE+ ++ MPYRI GG+RF+ER+E+KDAL+YLR +A Sbjct: 394 VDAGEAVFGDVAVFYRTNSASRSLEDVFIRNGMPYRIVGGVRFYERKEVKDALAYLRAVA 453 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N +D+ R++NTP RGIGDR V + ++ +A + + LA R+A++L Sbjct: 454 NPDDEINLRRILNTPRRGIGDRAEACVSVFAERERIGFGEALQRTGEIPGLAARSANSLS 513 Query: 460 RFMELIDALAQETA-DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 F EL+ L E M V++ +G R E + + +R+ENL++LV+ R+ Sbjct: 514 SFAELLAGLRSEVGFGMEPADLLTAVLERTGYRAELENSEDPQDGSRLENLDQLVSVLRE 573 Query: 519 FSYNEE--------------------------------DEDLMP-----LQAFLSHAALE 541 + DED+ P L A L +L Sbjct: 574 TTETLLAGGGLAALGLAADAGPEPGDGADAPAEPGPSADEDVPPDAGDLLLAVLEQLSLV 633 Query: 542 AGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A D+ + V LMTLH+AKGLEFP VF+ G E+G+FP Q +L + L EERRLAY Sbjct: 634 ADADSVPDSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPHQRALGDDSELAEERRLAY 693 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS--------- 651 VG+TRAM++L +T A R +G+ + SRF+ ++P E +E R A Sbjct: 694 VGITRAMKRLYVTRAMMRSAWGQPAANPASRFLDDIPAELIEWRRTDADARAGGFIGDSD 753 Query: 652 ----------------------------RPVSHQRMGTPMVENDS-------------GY 670 PV+ R G+ Sbjct: 754 FEGDYGYGRFGGRSGSRFGSGSGFGGRSAPVTASRFGSNSPSRAGARRGPTLGARPALEL 813 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 +G RV H K+G G ++ ++G+G+ + + F G L+ Sbjct: 814 AVGDRVSHDKYGLGKVLAVDGAGQRATATIDFGAAGKVRLML 855 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 813 bits (2100), Expect = 0.0, Method: Composition-based stats. Identities = 277/750 (36%), Positives = 409/750 (54%), Gaps = 39/750 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QR+A +++AGAG+GKT+VL RIA+L+ + P+ I+A+TFTNKA Sbjct: 5 LDMLNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI Q++G + +W+GTFH +LLR P F I D+ D LLK + Sbjct: 65 ANEMKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSLLKSI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-------QSYGNPVEQTWQKVYQAYQE 179 IK MNLD+K + P + I+S K+ + Q ++ ++Y Y + Sbjct: 125 IKEMNLDDKTYTPNTVLSRISSAKNRLITAQEYINNPIYQQDDEEAMKPKVGEIYVQYAK 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C +AG +DF ++LL + L IL Y+ERF IL+DEFQDTN QYA ++ LAG Sbjct: 185 RCLQAGAMDFDDILLNTYLLLNQHLDILYKYQERFQYILIDEFQDTNLAQYAIVKDLAGI 244 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDD QSIY +RGA + NI F D+P I+LEQNYRST NI+ AAN +I N Sbjct: 245 HKNICVVGDDAQSIYAFRGANIRNILNFEKDYPNLTIIKLEQNYRSTQNIVEAANGIIRN 304 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNA 358 N +L K +WT GE I L A + +E R V I + N + AILYR+N+ Sbjct: 305 NQLQLKKNVWTANEKGEVIGLIRATTDAEEGRLVAASIFEIKMQNQLRNEDFAILYRTNS 364 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR +EEAL + ++PYR+ GG F++R+E+KD L+YLR I N ND+ A +R++N P RGI Sbjct: 365 QSRAIEEALRKINLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEPKRGI 424 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G ++ + + D + LW+ L+GR A A++ F +I A+A + + Sbjct: 425 GPSNIEKMVVAASDHGIPLWEVMCNAKNF--LSGRVAEAVEEFAHMIQAMALDLTKKDAY 482 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + K SGL ++K +G R EN++EL++ + F+ N E D L FL Sbjct: 483 EIASEIAKRSGLLKSLYEDKTVEGLARYENVQELLSGIKAFTANPEQVD-TSLATFLQDV 541 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL + +D + LMT+H+AKGLEF V+IVG+EE +FPS M L LEEERRL Sbjct: 542 ALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIVGIEEDLFPSSMMLGSREDLEEERRL 601 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 YV +TRA +K+ L+Y +R +GK SRFIGE+ + Sbjct: 602 FYVALTRAQKKVFLSYTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTNY 661 Query: 643 ------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNME 690 + + + + + S K G +V H FG G ++++E Sbjct: 662 TKQFISSMRITPQQKSVKVKFQAYAQSSKPAFQPSDTSQLKSGMQVEHPTFGIGMVISVE 721 Query: 691 GSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G H + ++AF G K L+ ++A+L+ + Sbjct: 722 LTGTHKKARIAFSESGEKTLLLSFAKLKIL 751 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 348/795 (43%), Positives = 479/795 (60%), Gaps = 88/795 (11%) Query: 4 SYLLDSLNDKQREAVAAPRSN-------LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYS 56 S LL +LN +QREAV P N L+LAGAG GKTRVL RIAWL+ SP Sbjct: 3 SDLLANLNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSPIG 62 Query: 57 IMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 ++AVTFTNKAA EM R+ ++ + GMW+GTFHGL +RLLRAHH +A LP FQILD+ Sbjct: 63 VLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQILDT 122 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQA 176 +DQL +KRL+K + +D++++P +Q ++I K+ G R + S G+ + ++Y A Sbjct: 123 QDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRAKDL-SVGDDFQAKMAQLYAA 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E C R G+VDFAELLLR++EL + I HY+ERF +IL+DEFQDTN +QYAW++LL Sbjct: 182 YDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKLL 241 Query: 237 AGD-----------TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 +G + V VGDDDQSIY +RGA VEN++ + + ++LEQNYRS Sbjct: 242 SGHDASSINVSGMGSSSVFAVGDDDQSIYAFRGADVENMRLYEKQYHPL-MVKLEQNYRS 300 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 +IL AN LI NN+ RLGK L TD GEP+ +Y A ++ EA ++V+ IK ++G Sbjct: 301 HGHILDTANHLIANNSERLGKNLRTDADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGI 360 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+LYRSNAQSR++E AL A +PYR+YGG+RFFER EIK AL+Y RL+ N NDD Sbjct: 361 KRTEVALLYRSNAQSRIIEHALFSAGIPYRVYGGLRFFERAEIKHALAYSRLLENPNDDT 420 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 +F RVVN PTRGIG R+++V++ +R +Q +L+ A L G+A +AL F+ L+ Sbjct: 421 SFSRVVNFPTRGIGARSIEVLQDAARAQQCSLYLAA------STLEGKAGAALGGFVRLV 474 Query: 466 DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED 525 D + + T L + VI+ SGL Y E+ +GQ R+ENL+EL+ A F E Sbjct: 475 DHMREATRHNTLPETVEFVIQHSGLIQHYLSER--EGQDRVENLQELINAATAFIAEEGY 532 Query: 526 E-----------------DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFP 568 ++ PL AFLSHA+LEAG+ QA QDAVQLMT+HSAKGLEF Sbjct: 533 GQDAAAAMLSGENAPGVAEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFT 592 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VFI G+EEG+FP + S++E LEEERRL YV +TRA ++L L++ ++R L+G+ Y+ Sbjct: 593 SVFITGLEEGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNM 652 Query: 629 PSRFIGELPEECVEEVRLRATVSRP------------------------------VSHQR 658 PSRF+ ELP + ++ + +A +R HQR Sbjct: 653 PSRFLEELPSDSLKWLTPKARDARWGGGNLRSGSTRQDGYTRQREYESNDFFDSGSDHQR 712 Query: 659 MGT-------------PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 + + +GQ V H KFGEG + +EG +R QV F+ Sbjct: 713 PAKRVGSASMEVKRLISPPRGNYPFTIGQNVFHTKFGEGHVTGLEGVDADARAQVNFKRH 772 Query: 706 GIKWLVAAYARLESV 720 GIKWL + A+L ++ Sbjct: 773 GIKWLQLSIAKLVAI 787 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 284/747 (38%), Positives = 409/747 (54%), Gaps = 34/747 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L SLND Q++ LLVLAGAGSGKT+++ HR+A+L+ +N P +I+AVTFT Sbjct: 11 SEILKSLNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVDPQNILAVTFT 70 Query: 64 NKAAAEMRHRIGQLM---GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 NKAA EM+ R L+ G S G+W+ TFH +L+ H ++F I + DQ Sbjct: 71 NKAANEMKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGENFLIYTASDQK 130 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQ 178 +KR IK + K++P + +I+ K + + P + Y + Q Q+VY+AYQ Sbjct: 131 AAVKRAIKECEISPKEYPVKMFTSFISKCKSQKIVPDEVFDYFDDSFKTQISQQVYEAYQ 190 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LLL L+ P IL+ Y ERF I+VDE+QDT+++Q+ I LA Sbjct: 191 NVLKANNAMDFDDLLLNTVILFSKYPDILKIYAERFKYIMVDEYQDTSSLQFELINKLAH 250 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA +ENI F + G + I+LE+NYRST NIL AA+A+I Sbjct: 251 VHKNICVVGDDDQCIYEWRGATIENILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVIS 310 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN+ R KKLWT +GE IS+ N EA F+V++I+ + G + AILYR+N Sbjct: 311 NNSKRKEKKLWTGSVEGEKISIEVYENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYRNN 370 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +QSR+ EEAL + +PYRI G+RF+ER EI D L+YLR+ N DD AF R +N P RG Sbjct: 371 SQSRLFEEALKRWDVPYRILSGIRFYERSEIVDMLAYLRVTENPFDDIAFLRCINEPARG 430 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 +G + L+ V +R+R ++L+ L+ A + F+++I D Sbjct: 431 LGKKALEKVASFARERGISLFAGLLMDECLAELSAAARRGAEEFIKMIKHAQDMLLDENT 490 Query: 478 HV--QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV-TATRQFSYNEEDEDLMPLQAF 534 + +I+ SG + + ++EN+ ELV + + + D++ + L AF Sbjct: 491 RISNVLKYIIETSGYERKLKLADTLESDAKLENIYELVASVADREGSSAGDDEKLTLSAF 550 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L AL + D DAV LMTLHS+KGLEF VFI GMEEG+FPS D G++EE Sbjct: 551 LEEIALISDVDNHDETADAVVLMTLHSSKGLEFNVVFIPGMEEGIFPSGQGDDNPGKIEE 610 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRL YVG TRA ++L L+ A+ RR Y +++Y +PSRF+ E+PEE V+ + A+ Sbjct: 611 ERRLCYVGFTRAKEELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEASSRDRY 670 Query: 655 SHQRMGTPMVE---------------------NDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 + G P+ ++ + G V H KFG G I+ Sbjct: 671 TDGYAGDPIASPFKKIKPVNTVKEKMLTAKPVSEKEFSDGDTVEHDKFGRGLIIAQT--- 727 Query: 694 EHSRLQVAFQGQGIKWLVAAYARLESV 720 +AF GIK L A + V Sbjct: 728 -EKVWVIAFDDGGIKKLAKGIADIRKV 753 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 279/675 (41%), Positives = 376/675 (55%), Gaps = 46/675 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D + L LN++Q EAV S LL++AGAGSGKTRVL HRIA+L++ +P I+A+ Sbjct: 134 VDPASLTAGLNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAI 193 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR RI L+G MW+ TFH R+LR L F I DS D Sbjct: 194 TFTNKAAAEMRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQ 253 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY---GNPVEQTWQKVYQAY 177 RLL +IK +NLD K++ + I++ K+E + S NP E+T ++Y Y Sbjct: 254 RLLSLIIKELNLDTKKFTAKAVGNRISALKNELVSAEAYASRVASDNPYEKTIAQIYTVY 313 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + A +DF +L+ R L P I +YR +F +ILVDE+QDTN+ QY +R L Sbjct: 314 TQRLRAANSLDFDDLIGRTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYQLVRELV 373 Query: 238 GDT----------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQ 281 G ++ +VGD DQSIY +RGA + NI F D+P A TI LEQ Sbjct: 374 GAHVKAPADRGPYPDAVPPAELTVVGDSDQSIYAFRGADIRNITDFEKDYPNAHTILLEQ 433 Query: 282 NYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ 341 NYRST NILSAANA+IE N R KKLWT G I Y A +E EARF+ I Sbjct: 434 NYRSTQNILSAANAVIERNPDRRPKKLWTASGAGAKIIGYVAESEHAEARFITREIDRLA 493 Query: 342 DN-GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 D G + AI YR+NAQSR LE+ L++A +PYR+ GG RF+ER+EIKDAL+YLR ++N Sbjct: 494 DEHGVQPGDVAIFYRTNAQSRTLEDMLMRAGLPYRVVGGTRFYERKEIKDALAYLRALSN 553 Query: 401 RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 +DD R++N P RGIG ++ VV + +++ + A R+ L A Sbjct: 554 PDDDVNVRRILNEPKRGIGAKSESVVADYATAHRISFFAAARQAADVPGLGAAAVKKYAE 613 Query: 461 FMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 F+ L+D LAQ P + V++ +G K + ++R+ENL EL+ A +F Sbjct: 614 FVRLMDDLAQIARTEPAATCLEAVLEQTGYLAALRASKDIQDESRVENLSELLDAMVEFE 673 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA-----------------------VQLM 557 D L+ FL H AL A + V LM Sbjct: 674 TENPGAD---LEQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLM 730 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAET 617 TLH+AKGLEFP VF+ GME G+FP Q +L + + EERRLAYVG+TRAM++L LT +ET Sbjct: 731 TLHTAKGLEFPVVFLTGMEHGLFPHQRALTDEKEMSEERRLAYVGLTRAMERLYLTRSET 790 Query: 618 RRLYGKEVYHRPSRF 632 R ++GK ++ PS F Sbjct: 791 RTMWGKSQFNPPSPF 805 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +G VRH KFGEG ++ +EGSG+ + +V F G K L+ YA LE V Sbjct: 930 KEIPTLAVGDTVRHTKFGEGRVLAVEGSGDKTVAKVRF-GSEEKRLLLRYAPLEKV 984 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 809 bits (2090), Expect = 0.0, Method: Composition-based stats. Identities = 278/789 (35%), Positives = 404/789 (51%), Gaps = 76/789 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL+ LN +QREAV LL++AGAGSGKTRVL HRIA L+ P I+A+TFT Sbjct: 32 DPLLEGLNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFT 91 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEMR R+ L+G + GMW+ TFH R+LR Q+F I DS D L+ Sbjct: 92 NKAAAEMRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLI 151 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQEA 180 KR+IK ++ D + I+ K+E ++ +P E + ++++ Y + Sbjct: 152 KRIIKQLDADTLGFTVSSVSGRISKLKNELSDADTFARTANFNDPAEAMFVEIFRQYTRS 211 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 A DF +L+ + L+ P + Y+ RF ++LVDE+QDTN+ QY+ IR L Sbjct: 212 LASANAFDFDDLIGQTVYLFRAFPKVAALYQRRFRHVLVDEYQDTNHAQYSLIRELTRAV 271 Query: 239 -------------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 D + +VGD DQSIY +RGA + NI F DFP ++ + L Sbjct: 272 APEDVPVDTRMSTNGMGGIDGASLTVVGDSDQSIYAFRGADIRNITEFERDFPQSKVVLL 331 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 EQNYRST NIL+AANA+I NN R KKLWT DG+ I + ++ DEA+FV + I+ Sbjct: 332 EQNYRSTQNILTAANAVISNNFDRKDKKLWTSIGDGDKIVGFTGYSGHDEAQFVADEIQK 391 Query: 340 WQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 + G A +E A+ YR+NAQ+R LEE L+++++PYRI GG +F+ER EIKDA++YL +A Sbjct: 392 LHEEGTAYSEIAVFYRTNAQTRALEEILIRSAVPYRIMGGTKFYERAEIKDAMAYLVAVA 451 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N D A R++NTP RGIG T + + +T +A R E L + A+ Sbjct: 452 NPADVLALRRILNTPKRGIGPATETALANFAESHGVTFREAMRRA-SELGLGPKVTQAIL 510 Query: 460 RFMELIDALA------QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV 513 ++D +A + + +++ SGL K + + R EN+EELV Sbjct: 511 ALSRMLDEVALLLDPDRPEGRTSVGDLVTTLLEKSGLVQALRASKDAQDEARAENVEELV 570 Query: 514 TATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIV 573 T++FS N + L FL+ +L A + D V LMTLH+AKGLE+ VF+ Sbjct: 571 AVTKEFSRNNPEG---QLVDFLTEVSLVAAADELDDSSGTVSLMTLHTAKGLEYDSVFLT 627 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 G+EE + P +MS +E G EERRL YVG+TRA ++L ++ A TR +G+ PSR++ Sbjct: 628 GVEEDLLPHRMSANEPGGPAEERRLFYVGITRARRRLFISLAMTRAQFGEVNVAMPSRYL 687 Query: 634 GELPEECVEEVR-----------------------------------------LRATVSR 652 E+P E ++ + Sbjct: 688 QEIPAELIDWKQSPGMATSRGGTQPRALNARREGGGYGGRSRSSSGFEDPALPPPPRPKT 747 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLV 711 ++ G D G R+RH FG+G + + G G +V F G G K L+ Sbjct: 748 QWANTVTGQVRDNGDLELAFGDRIRHTDFGDGRVTGVTGEGRKRIAEVQFDGPAGRKRLL 807 Query: 712 AAYARLESV 720 A +E + Sbjct: 808 IKIAPIEKL 816 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 260/732 (35%), Positives = 407/732 (55%), Gaps = 25/732 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ DSLNDKQ+EA+ LL+LAGAGSGKT+V+ +IA+L+ E + I+A+ Sbjct: 1 MDI----DSLNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYLIENE-VPSWRILAI 55 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+ MW+GTFH + R+LR + + ++ I D DQ Sbjct: 56 TFTNKAAREMRERVAMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQN 115 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQ 178 ++K K +N++++ + R + I+S K+E L P + + K+Y+ YQ Sbjct: 116 TIIKESYKELNINKEIYNSRTILSKISSWKNEELTPSEVLDGNKEDIFNFNAGKIYEFYQ 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LL++ EL P + + Y+ +F I VDE+QDTN+IQY I+L G Sbjct: 176 NKLKENNALDFDDLLIKTVELLREFPDVREFYQNKFKYIFVDEYQDTNSIQYKLIKLFCG 235 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD+DQSIY WRGA + NI F DFPGA+ I+LEQNYRST NIL AN++I+ Sbjct: 236 KAPNLTVVGDNDQSIYKWRGADISNILNFQKDFPGAKIIKLEQNYRSTQNILDVANSVIK 295 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN L K LWT GE + +E V N+I G + + AILYR+NA Sbjct: 296 NNPQELSKSLWTKRQGGEKVYYKEFSVSNEEEFAVTNKILGLNYKGYSFEDMAILYRTNA 355 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EE+L + + Y+I GG+RF++R E+KD ++YL++I N D+ A R++N P RGI Sbjct: 356 QSRGFEESLSREGINYKIVGGLRFYDRAEVKDIMAYLKVINNPLDEIALLRIINKPKRGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD +++ +R + + L++++ + + + L RA ++ F LI+ L + + + Sbjct: 416 GDSSVEKIRDYAINNNLSMFEVIKNIENYEDLNVRAKKNIKSFANLINLLIERKDLLNVG 475 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + V+ +S + + + +T+I N++EL++ + L +LS+ Sbjct: 476 ELAELVVDESQYVEDLKNQNTLEARTKISNIDELISNIMSYDKE------TSLSDYLSNM 529 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + V LMT+H+AKGLEF VF+VGMEEG+FP ++ E ERRL Sbjct: 530 SLLTDIDKTSDAK-GVNLMTVHAAKGLEFKIVFLVGMEEGLFPIIRQDEDEDIEE-ERRL 587 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE--ECVEEVRLR--------A 648 YV +TRA L ++ ++TR LYGK SRFI E+ + E VEE R Sbjct: 588 CYVAITRAEDLLFISSSKTRYLYGKMTPKIKSRFINEMQDTIEIVEEKNQRLIDVIDYSG 647 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 + ++ + ++ +G +V+H FG+G IV + + V+F+ +G+K Sbjct: 648 KIDERITTYKKVQTPKKSIKSVNVGDKVKHKIFGQGMIVQKKEKNGDIEVVVSFENKGLK 707 Query: 709 WLVAAYARLESV 720 L+ + A +E + Sbjct: 708 KLLLSVAPIEVI 719 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 291/672 (43%), Positives = 400/672 (59%), Gaps = 15/672 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LD LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I+AVTFT Sbjct: 66 PSYLDGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFT 125 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ RI ++G + GM W+GTFH + R+LR HH L F ILD++DQLRL Sbjct: 126 NKAAREMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRL 185 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEA 180 LK+LI A +DEK+WP R I+ K+ GL P + + Q +Y AYQ Sbjct: 186 LKQLIAAEEIDEKRWPARMLASAIDGWKNRGLTPEQVPAGEGAAFANGRGQMLYAAYQAR 245 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +LLL L+ P +L Y +F ILVDE+QDTN QY W+RLLA + Sbjct: 246 LKALNAVDFGDLLLEGIRLFRENPDVLAEYHRKFKYILVDEYQDTNVAQYLWLRLLAQGS 305 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V VGDDDQSIYGWRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI N Sbjct: 306 RNVCCVGDDDQSIYGWRGAEVDNILRFESDFPGAKVIRLERNYRSTGHILAAASHLIAFN 365 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 GRLGK L+++G GE +++ A++ +EAR + + I+ Q G AL++ AIL R++ Q Sbjct: 366 EGRLGKTLFSEGEKGEKVTVTGAWDSGEEARAIGDEIEALQRAGHALSQIAILVRASFQM 425 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + + YR+ GG RF+ER EI+DAL+YLR + + DD AFER+VN P RG+GD Sbjct: 426 REFEDRFVTLGLNYRVIGGPRFYERAEIRDALAYLRCVISPADDLAFERIVNVPKRGVGD 485 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + +R +R + L +A R L + + L + S L+ F++ + ++ +M Sbjct: 486 AAIKQIRDVARAAGVPLMEATRLLTESEELKPKLRSTLRGFVQSFERWREQAENMKHTEL 545 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG M+++++ + R+ENL+ELV + F L FL H +L Sbjct: 546 AEVVLDESGYTEMWQKDRSAEAAGRLENLKELVRSMEGFEN---------LSGFLEHISL 596 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRL 598 DAVQ+MTLHSAKGLEF VF+ G EEG+FP Q +LDE G+ LEEERRL Sbjct: 597 VMDVDSG-AGDDAVQIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEQGKAGLEEERRL 655 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 AYVG+TRA + +A RR++G PSRF+ ELP+ V+ + + Sbjct: 656 AYVGITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVDVQESKGGFGWGGTTGG 715 Query: 659 MGTPMVENDSGY 670 G S + Sbjct: 716 YGGGNSYGASRF 727 Score = 51.7 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%) Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 PV + S + G+RV H KFG G I ++G+ +L V F+ G K ++ Sbjct: 774 PVIEGTLIAASTGAPSAFSAGERVFHIKFGYGEITAIDGN----KLTVLFEKAGEKRVLE 829 Query: 713 AYARLESV 720 ++ +E V Sbjct: 830 SF--VEKV 835 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 279/744 (37%), Positives = 400/744 (53%), Gaps = 32/744 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 + S LL LN Q +A LV+AGAGSGKTR LV+RIA L+ P I+AV Sbjct: 4 LPASSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILAV 63 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R L+ +W+ TFH R+LRA+ L + F I D +DQL Sbjct: 64 TFTNKAAAEMRERARHLV-EGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDDQL 122 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKVYQ 175 +LK ++ ++ + PR ++ K L P + + P + + Y+ Sbjct: 123 DILKEIMGSIPGIGAETHPRVLRGILDRAKSNLLTPADLARHPEPFISGLPREVAAEAYR 182 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+ +DF +L+ L+ P +L+ ++R I VDE+QDTN QY RL Sbjct: 183 RYEARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDRARFIHVDEYQDTNKAQYELTRL 242 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA +++VGD DQSIY +RGA ++NI F D+ A+ LEQNYRS++ +L+ AN Sbjct: 243 LASRDRNLLVVGDPDQSIYRFRGADIQNILDFQKDYLDAKVYMLEQNYRSSARVLTIANK 302 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LIENN RL K L DG P+ + A ++ E FV + G ++ A+LYR Sbjct: 303 LIENNAERLEKTLRPVKEDGHPVLFHRATDQRAEGDFVAEWLTRLHAEGMRFSDMAVLYR 362 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSRV+EE+L + +P +I GG+ F++R+EIKD L+Y RL N +DD A R++ P Sbjct: 363 TNAQSRVIEESLRRVQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGRPK 422 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 RGIGD L+ + + +R ++ AC QE + R A F L+ A+++ + Sbjct: 423 RGIGDTALERLMEWARVNGTSILTACAHA-QELNILERGAQKAVEFAGLMHAMSEAADND 481 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 VI+ SG + QE G++GQ R+ENLEELV+A ++S E + FL Sbjct: 482 EPGPFLRYVIETSGYLDLLRQE-GQEGQVRLENLEELVSAAEEWSRENEG----TIGDFL 536 Query: 536 SHAALEAGEGQA-------DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE 588 AAL + D +DAV LMTLH+AKGLEFP VFIVG EEG+ PS+ +L E Sbjct: 537 DDAALLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKNALLE 596 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP------EECVE 642 G +EEERRL YVG+TRAM++L LT A+ R YGK + SRF+ E+ + + Sbjct: 597 PGGIEEERRLFYVGITRAMERLFLTAAQNRMQYGKTLATEDSRFLEEIKGGFDTVDAYGQ 656 Query: 643 EVRLRATVSRPVSHQRMGTPMVENDSG-------YKLGQRVRHAKFGEGTIVNMEGSGEH 695 + R + P ++ Y+ G++VRH KFGEG ++ + G G+ Sbjct: 657 VIDDRPKSWKEYRPTESARPGAVKNTSPLTEGMAYRGGEKVRHPKFGEGQVLAVAGLGDR 716 Query: 696 SRLQVAFQGQGIKWLVAAYARLES 719 + V F G K L+ +A L Sbjct: 717 QEVTVHFPSAGTKKLLVKFANLTR 740 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 805 bits (2080), Expect = 0.0, Method: Composition-based stats. Identities = 270/741 (36%), Positives = 405/741 (54%), Gaps = 37/741 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M VS L LN +Q AV A +LVLAGAGSGKT+VL +RIA+L+ + P I+A+ Sbjct: 1 MVVSSQLAELNQEQTAAVTAGDGPVLVLAGAGSGKTKVLTYRIAYLLETKGIHPEQILAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++ WV TFH R+LR +DF I D+ D+ Sbjct: 61 TFTNKAAGEMKERVQTIVEGDAPS-WVSTFHAACVRILRREIDLLGYGKDFLIYDTRDKT 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +++K L+ NLD+K++P + I+ K+ P + + +V++AYQ+ Sbjct: 120 KIVKDLLADFNLDKKKYPHQAVAKKISGVKNNLQDPRELFYPYD-------EVFEAYQKR 172 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LLL L+ P LQ+Y+ +F ILVDEFQDTN Q I LL+ Sbjct: 173 LKKENALDFDDLLLLTLRLFEQYPDRLQYYQNKFQYILVDEFQDTNPAQNRLISLLSPPQ 232 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V +VGDDDQSIY +RGA V+NI F +P A+ +LE+NYRS+ IL AAN ++ NN Sbjct: 233 DNVFVVGDDDQSIYLFRGADVKNILEFEKTYPNAQVYKLEKNYRSSKTILEAANQVVTNN 292 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+LWTD +G P+ Y A +E DEA F+ I+ N L A+LYR+NAQS Sbjct: 293 PSRKSKELWTDNDEGYPLQYYEADDERDEAYFIAEEIR---ANRYQLPLIAVLYRTNAQS 349 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLE+ + + Y + GG F++R+E+KD ++YL ++ D+ ER++N P RGIG Sbjct: 350 RVLEDIFRKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCPQSDSQLERIINEPKRGIGK 409 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++D ++ + +TL+ A E+ ++ R +++++F ++I + + + Sbjct: 410 TSVDKLKDYANRNNITLFDALLEV-DYTDISKRGKNSVKKFTDMIGNFRKMREYLTVREL 468 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V + SG + ++ +TR+EN+ E+ + ++F E E LQ FL+H+ L Sbjct: 469 IEEVAEKSGYLEALRSQNTKEAETRMENVREIYSMAKEF----EAEGGETLQEFLTHSTL 524 Query: 541 EAGEG-QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 D Q V +MTLHSAKGLEFP VF+ G+EEG+FP + D +EEERRL Sbjct: 525 MGDIDTWEDEEQAQVVMMTLHSAKGLEFPGVFLTGLEEGVFPHIRTYDSEASMEEERRLC 584 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------EVRLRAT 649 YVG+TRA Q L LT+A R L G +PSRF+ E+ E+ + +V Sbjct: 585 YVGITRAEQVLYLTWARERTLNGMTRMLQPSRFVSEIGEDLKDTQHQTLSGQGQVTSTQN 644 Query: 650 VSRPVSHQRMGTPMVENDS----------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 P Q + S Y+ G + H K+GEG ++ + +G L Sbjct: 645 SHEPPQTQISSFSDKTSPSGKRNVNLAEESYQEGDLISHKKWGEGKVLQAQQAGSDWVLT 704 Query: 700 VAFQGQGIKWLVAAYARLESV 720 V+F G GIK L A+ A ++ + Sbjct: 705 VSFDGAGIKKLAASVAPIKKL 725 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 270/736 (36%), Positives = 404/736 (54%), Gaps = 27/736 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S L LN++Q++AV +L+LAGAGSGKTRV+ HRIA L+ I A+TFT Sbjct: 3 SSFLIGLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVNHGID--RICALTFT 60 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEM R+ L+ + + TFH L +LR F + D+ Q LL Sbjct: 61 NKAAAEMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQESLL 120 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGN-PVEQTWQKVYQAYQEAC 181 K+++K ++LD K + P YI+ KD+ L P +++ G +T +Y+ Y++ Sbjct: 121 KQVVKDLSLDPKFYKPSMLGNYISGLKDKMLSPETYLEKEGRTDFSKTVSAIYKEYEKRK 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 D DF +L+ + +L+ P + YR ++ ++VDE+QDTN +QY + LLAG+ Sbjct: 181 DANRAFDFGDLIWKTVQLFQKSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKR 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIY WRGA + NI F DFP + I+LE+NYRS+SNI+ AA+ +I NN Sbjct: 241 NLCVVGDDDQSIYSWRGADIGNILNFEKDFPESTVIKLEENYRSSSNIILAASKVISNNT 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K+++T+ G P+ L NE +EA V+ RI++ G AI YR+N+QSR Sbjct: 301 QRKQKEIFTNNPKGSPVVLNEFENESEEAHGVITRIRSAYSYGTEYKNIAIFYRTNSQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 EEAL +PY+I+GG RFF+R EIKD ++YL +++N D + R+VN P RGIGD Sbjct: 361 YFEEALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPPRGIGDS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPLHVQ 480 + +R+ S ++ ++L +A + ++ L A S + L L ++ Sbjct: 421 GIGKIREFSLEKGISLLEALGQ--EDIPLKKAAKSKGKELYSLFSDLIEKVEKSSSPSEI 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++ SGL + E E+ R+ENL+ELV + ++ N D L+ +L+ +L Sbjct: 479 ALELLNRSGLVSHLRDEGTEESIARLENLQELVNSIEEYEKN---SDSPSLEEYLNQISL 535 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLA 599 E ++ D V LMT+H+AKGLEF VF+ G+EEG FP MSL++ EEERRL Sbjct: 536 ITSEEESKELTDYVNLMTVHNAKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGDEEERRLF 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA ++L L+Y T R +GK PSRF+ E+PEEC E R +R + Sbjct: 596 YVALTRAREQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSPQGAPL 655 Query: 660 GTPMVENDSGY---------------KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 + + + K G RVRH +FG GTI + G +++++ + F Sbjct: 656 ASKTRRIEEKFNSGFSSTPDPTNLYLKPGDRVRHKQFGIGTIQTISGKEKNTKVSIRFGN 715 Query: 705 QGIKWLVAAYARLESV 720 K AY LE + Sbjct: 716 V-EKNFFVAYTPLEKL 730 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 259/720 (35%), Positives = 392/720 (54%), Gaps = 26/720 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + L LN Q+EAV LLVLAGAGSGKTRV+ ++ A+L + P SI VTFT Sbjct: 3 DFPLRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVTFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ RI ++ + W+GTFH L R+LRAH + +DF I D +DQ L+ Sbjct: 63 NKAADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAGLI 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEAC 181 KR++K +N+ E + + I++ K + P S G E+ ++Y YQ Sbjct: 123 KRILKDLNMHEA--LCKCVVTKISNLKSNLITPEDYISNIEGYEFEERLGRIYMRYQNEL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R +DF +L+L +L+ +L+ Y E+F ILVDEFQDTN QY ++LL Sbjct: 181 KRYNALDFDDLILCVIKLFNENEDLLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDDDQSIY +RGA + NI F DFP + ++LEQNYRST +I+ A++A+I N Sbjct: 241 NICAVGDDDQSIYKFRGANIHNILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNT 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQS 360 R K LWT+ GE I NE +EA+++ IK G + AILYR Q+ Sbjct: 301 MRKPKILWTERDWGEKIFYCQLNNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQA 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEAL +PY++ G+ F+ R+EIKD L+Y+R I N+ D+ + R++NTP RGIG Sbjct: 361 RALEEALRMEGIPYQVISGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPPRGIGA 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + + ++ ++ ++A + +++E ++ L F+ LID L+++ + Sbjct: 421 SAISKIESEAKKYMISTFEAIKRIIKEDTVSATLKEKLVSFVTLIDELSEKDYKDAASMI 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 D ++ +G E + RI+N+ E +++ + MP++ FL AL Sbjct: 481 KD-ILNFTGYLEEIE-------EDRIQNVLEFLSSAEK----------MPVREFLDKVAL 522 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + + ++ V L+TLH+AKGLEFP VFI G EEG+ P +L++ L+EERRL Y Sbjct: 523 FSNVDTWENKKNYVSLLTLHAAKGLEFPVVFIAGCEEGILPYFKALEDPFELQEERRLFY 582 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRA L +T + R+LY K S FI ++P E +R + P + Sbjct: 583 VGMTRAKNLLFITSVKQRKLYSKVQKQETSSFIKDIPPEYCICIRKDYSTFAPNKKEPET 642 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + + + +G +V+H +G G + + G G+ ++ V F G GIK L LE V Sbjct: 643 SKI---KPPFVIGCKVKHPTWGVGVVRDCYGEGDDLKVIVNFPGIGIKKLAPKIVNLERV 699 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 325/722 (45%), Positives = 457/722 (63%), Gaps = 19/722 (2%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN KQ+EAV + L+LAGAGSGKT+VL R AWL+ + SP I+AVTFTNKAA Sbjct: 14 QELNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASPGGILAVTFTNKAA 73 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM RI + + GMWVGTFHGL +R L+ H+ DA+LPQ FQILDS DQ +KR++ Sbjct: 74 KEMLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQIFQILDSADQKSAIKRVM 133 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 K MN+DE P ++ +++IN K+EG+R + +++ + E+ +Y+AY++ C + G+V Sbjct: 134 KKMNIDEDFLPSKEVLYFINGNKEEGVRSNAYKAFDDISEKKNA-IYKAYEDQCLKEGVV 192 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DFAELLLR EL+ NKP I +HY+ F +ILVDEFQDT+ +QY W++LL + VG Sbjct: 193 DFAELLLRCLELFQNKPMIREHYQSIFKHILVDEFQDTSKLQYEWLKLLTAKNSFIFAVG 252 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYG+RGA+ N++ DF I+LEQNYRS +NIL+AANA+IENN RLGK Sbjct: 253 DDDQSIYGFRGARPGNMKDLQKDFKINNIIKLEQNYRSKNNILNAANAIIENNADRLGKN 312 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 LW++ DG+ I Y A ++ E ++++ IK +G + AILYR+NAQSRV+E A+ Sbjct: 313 LWSEAGDGDLIRQYNALDDRFETSYILDEIKGLHRSGSRYDQIAILYRNNAQSRVIEMAM 372 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 + ++PYR+YGG+RFFER EIK +L+YLRLI N+ DD AF R++N P RGIG + L++++ Sbjct: 373 VSNNIPYRVYGGLRFFERAEIKSSLAYLRLITNKKDDTAFLRIINFPPRGIGAKALELIQ 432 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 + +++LWQ+ + E + + F+ LI + + + D + Sbjct: 433 DVANAEKISLWQSAERIESENK-----NTKISFFVHLIRHIEDQIEGNNIDESIDFINSY 487 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDLMP-------LQAFLSHA 538 S L+ Y ++K G +RIENL+ELV+A + + + EE+ + L FL Sbjct: 488 STLKDHYGKDK--DGSSRIENLDELVSAAKAYINEFREENTENESGDSKASILSDFLDFT 545 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +LE+GE QA DA+QLMT+HS+KGLEF VFI G+EEG+ P + SL E LEEERRL Sbjct: 546 SLESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPHERSLSENNGLEEERRL 605 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV VTRA QKL LT A++R YG+ +Y+ PSRF+ E+P E V+ R+ A Sbjct: 606 MYVAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEIPNELVK--RINAPKKSFAISTA 663 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 E +K+G V HAKFG G + EG+ R+Q+ F G+KWL YA+L Sbjct: 664 KIATHSETKHAWKIGAAVEHAKFGVGIVTGYEGNENDLRVQINFHSYGVKWLAMEYAKLA 723 Query: 719 SV 720 + Sbjct: 724 EI 725 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 286/721 (39%), Positives = 394/721 (54%), Gaps = 34/721 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL SLN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFT Sbjct: 9 EALLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTFT 68 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ ++ G +WV TFH A R+LR + L F + D +DQ LL Sbjct: 69 NKAAEEMKARLKAMV-RGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALL 127 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQ 178 K ++K + L K P + + + K++G+ P H+ + Y Q V YQ Sbjct: 128 KEVLKELGLAAKPGPIKSLL---DRAKNQGVPPEHLLLELPEFYAGLSRGRLQDVLHRYQ 184 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 EA G +DF ++LL A +L +L+ R+R I VDE+QDTN +QY + RLLAG Sbjct: 185 EALRAQGALDFGDILLYALKLLEEDGEVLKRVRKRARFIHVDEYQDTNPVQYRFTRLLAG 244 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +M VGD DQ IY +R A + NI F D+P A RLE NYRST IL ANA+I Sbjct: 245 EEANLMAVGDPDQGIYSFRAADIRNILDFTQDYPKARVYRLEDNYRSTEAILRFANAVIV 304 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N RL K L GEP+ L+ A + DEARFV I G A+LYR+NA Sbjct: 305 KNALRLEKTLRPVKKGGEPVRLFRAESARDEARFVAEEIARL---GPPFDRVAVLYRTNA 361 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGI Sbjct: 362 QSRLLEQALASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPLDAVSLKRVLNTPPRGI 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T++ V+ +R+R L L++A + AL L+ F+ L++ L A P Sbjct: 422 GPATVEKVQAIARERGLPLFEALK----VAALTLPRPEPLRAFLALMEELMD-LAFGPAE 476 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 ++ + ++ E + R+EN+EEL+ A ++ L FL Sbjct: 477 AFFRHLLLATDYPAYLKEAYPEDAEDRLENVEELLRAAKEAE---------SLMDFLDKV 527 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + SL LEEERRL Sbjct: 528 ALTARAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSSLSTQEGLEEERRL 587 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YVGVTRA ++L L+YA+ R +YG+ RPSRF+ E+ E E R S + Sbjct: 588 FYVGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEVY----DPYRQSSRKP 643 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 P ++ G++V H +FG GT+V G + V F+G G+K L YA L Sbjct: 644 TPPPHRALPGAFRGGEKVVHPRFGPGTVVAAAGD----EVTVHFEGVGLKRLSLKYADLR 699 Query: 719 S 719 Sbjct: 700 P 700 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 801 bits (2070), Expect = 0.0, Method: Composition-based stats. Identities = 299/804 (37%), Positives = 418/804 (51%), Gaps = 109/804 (13%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LN QR+AV +L+LAGAG+GKT+ L RIA LM+ P I+AVTFTNK Sbjct: 36 YFEGLNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGGARPDEILAVTFTNK 95 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM +RIG L + GM W+GTFH + +LLR H L +F ILD++DQLRLLK Sbjct: 96 AAREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSNFTILDTDDQLRLLK 155 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACDR 183 +LI+A ++DEK+WPPR I+ K++ P + + + +Y AYQ Sbjct: 156 QLIRASSIDEKRWPPRMLAGIIDGWKNKAWTPAQVPVGESSAYDDKGIDLYAAYQHRLKE 215 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +LLL ++ IL Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 216 LNACDFGDLLLHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQGHKNI 275 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIYGWRGA+V NI F DFPGA +RLEQNYRST +IL AA +I+ N R Sbjct: 276 CCVGDDDQSIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKDR 335 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-----NGGALAECAILYRSNA 358 LGK L+TDG DGE + L ++ +EAR++ I++ Q + L AIL R++ Sbjct: 336 LGKTLFTDGEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRGLDAMPLNSMAILVRASH 395 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q R E+ L +PYR+ GG RF+ER EI+DA++Y RL +++DD AFER+VNTP RG+ Sbjct: 396 QMRSFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSQDDDLAFERIVNTPKRGL 455 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE------- 471 GD+ + ++ T+R + L + R + + GR +AL+ ++ +D Sbjct: 456 GDKAVQTIQITARTNGVNLIEGARLCVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQS 515 Query: 472 -----------------------------TADMPLHVQTDRVIKDSGLRTMYEQEKGEKG 502 +++ + ++ + G ++ EK + Sbjct: 516 QSNGVTRGDMADDDESVIDDGPTVEVFDGASNVNHVELAEVILDECGYTAHWQNEKTPEA 575 Query: 503 QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSA 562 R+ENL+ELV A F LQ FL H +L + D D V +MTLH A Sbjct: 576 PGRLENLKELVKALENFD---------SLQGFLEHISLIMDNAK-DEEDDKVTIMTLHGA 625 Query: 563 KGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 KGLEFP V++ G E+G+FPSQ S+DE G LEEERRLAYVG+TRA + T+++ +R + Sbjct: 626 KGLEFPSVYLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEKHCTISFTSSRLV 685 Query: 621 YGKEVYHRPSRFIGELPEECVE-------------------------------------- 642 YG+ PSRFI ELPEE VE Sbjct: 686 YGQWQSQMPSRFIDELPEENVEVLTPPGLYGGGFGAAGMSARANPVSEGIASTLHEKMAK 745 Query: 643 ------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNME 690 + R + R ++ S + G+RV H KFG G ++ +E Sbjct: 746 ADVYNSPGWRRLQSRSQQRSMSQPKESRNSVIDMKATSSFTTGERVFHQKFGYGEVMEIE 805 Query: 691 GSGEHSRLQVAFQGQGIKWLVAAY 714 G +L + F G K +VA + Sbjct: 806 GD----KLLIEFDKAGEKKVVAKF 825 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 272/767 (35%), Positives = 422/767 (55%), Gaps = 52/767 (6%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LD+LN +Q++AV LL+LAGAGSGKTRVL RIA+L+ SP++I+A+TFTN Sbjct: 2 NILDNLNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EMR R+ +L+ +WV TFH ++LR + F I D++D ++K Sbjct: 62 KAAREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAVVK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACD 182 +++KA+N+D K++P + + I++ K++ + S + +VY Y++ Sbjct: 122 QVLKALNIDNKEFPEKTCLNVISNAKNDFIDAEEFAVNSKFGVDNNVYARVYSEYEKRMK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA----- 237 +DF ++L++ EL+ L++Y+ RF ILVDE+QDTN +Q+ ++LLA Sbjct: 182 NNNALDFDDILVKTVELFQTDKDTLEYYQRRFRYILVDEYQDTNIVQFKLLKLLANYVNE 241 Query: 238 --GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + +VGDDDQSIY +RGA + NI F +P A I+LE+NYRST NIL AAN Sbjct: 242 DGEIENNLCVVGDDDQSIYKFRGADIRNILNFEKIYPNALVIKLEENYRSTGNILEAANG 301 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILY 354 +I NN R K+LWT G IS EA V N + + G ++ A+LY Sbjct: 302 VISNNKERKDKRLWTSKEGGASISYKTYDTGEREANGVANTVLRTVNEGKAKYSDIAVLY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR +EE + +++PY++YGG F+ R+EIKD L+YL+ I N DD R++N P Sbjct: 362 RTNAQSRAIEEKFIYSNIPYKLYGGTNFYSRKEIKDILAYLKTINNPKDDTQVRRILNVP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFME-LIDALAQETA 473 RGIG T D + + +++++ ++AC + L+ RA + +++F+ + + + Sbjct: 422 KRGIGSATEDKIADYALEKEISFFEACMRVQSIPGLS-RAVAKVEKFVAFIGAKIREFKD 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + + + + +I++ G + E ++ Q RIEN+EEL+ F +D + L Sbjct: 481 TVCMKAEVEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGN 540 Query: 534 FLSHAALEAGEGQADTW---QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DE 588 FL+ +L D+ D V LMTLHSAKGLEF VFIVGMEEG+FPS+M L + Sbjct: 541 FLADVSLATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGLFPSRMCLFAMD 600 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC------VE 642 LEEERRL YVG+TRAM+KL L+ A +R L G ++ PSRFIGE+PE ++ Sbjct: 601 ESELEEERRLCYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPEHLLSVGGSID 660 Query: 643 EVRLRAT----------VSRPVSHQRMGTPMVEND-------------------SGYKLG 673 +R + S+ +Q G + + +G Sbjct: 661 NIRQKRNENLYAGDRNAFSKSAGYQTGGASSDKRNIFSGNPYISKGFGGGIGVSDSVNIG 720 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RVRHAKFG G ++++ + ++ + GI+ + A L+ + Sbjct: 721 DRVRHAKFGAGEVIDLVRENDAVSIKFDNETFGIRKMKLGMAGLKKI 767 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 800 bits (2066), Expect = 0.0, Method: Composition-based stats. Identities = 277/728 (38%), Positives = 384/728 (52%), Gaps = 61/728 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ + LN Q +AV P LLV+AGAGSGKTRVL RIAWL++ P+ I+A+TF Sbjct: 51 ITAITKGLNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITF 110 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ L+G + MWV TFH R+LRA + + F I D+ D L Sbjct: 111 TNKAAGEMRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKAL 170 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEA 180 L R+IK LD K++ P+ I++ K+E + P + + Q ++Y YQ+ Sbjct: 171 LTRIIKGRGLDPKRFTPKSFAARISNAKNELVEPATFAEMAAPDKISQLTAEIYAEYQQL 230 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD- 239 RA DF +L+ LW P IL YR++F +LVDE+QDTN QY +RLLA D Sbjct: 231 LRRANAFDFDDLIAEVVYLWRRHPEILAKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDP 290 Query: 240 --------------TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 + +VGD DQSIY +RGA + NI+ F DFPGA T+ LEQNYRS Sbjct: 291 LGDPRLDGALGAHPGAGLTVVGDSDQSIYAFRGATIRNIEEFEQDFPGATTVYLEQNYRS 350 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T ILS ANA+I N+GR K LWT+ DG ++ A E DEA F++ I+ G Sbjct: 351 TGTILSVANAIISENSGRHKKNLWTEAGDGPKAIMFAADTERDEAAFIIREIRDAHTAGT 410 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+ YR+N+QSR LEE L + ++PYR+ GG +F++R+EIKDA++YL AN DD Sbjct: 411 PWDEFAVFYRTNSQSRALEEMLTRENVPYRVVGGTKFYDRKEIKDAIAYLTAAANPADDG 470 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELL----QEKALAGRAASALQRF 461 R++N P RG+GD +R+ +R + QA R + E L+ +A +AL Sbjct: 471 NLLRILNEPKRGLGDVAQTKIREAARLSGTSFGQAMRGFITGGVHEGQLSAKATTALASL 530 Query: 462 MELIDALAQ-ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 + L+D L + A PL ++DSG + RIENL EL +FS Sbjct: 531 VNLLDNLRGLDEAGAPLDEILGTALEDSGYLPKLRASNNPQDDARIENLLELHAVAEEFS 590 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQ---------------------------------A 547 +E D L FL +L A Q A Sbjct: 591 LSEPDSR---LADFLERISLVADTDQLPDQGSKEVAAKEMAPREPETNVSEASGDHPNPA 647 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 + V LMT+H+AKGLEF VF+ GME+G+FP SLD+ +EEERRLAYV VTRA Sbjct: 648 PETKPEVTLMTVHTAKGLEFNTVFVTGMEDGLFPHSRSLDDPEAIEEERRLAYVAVTRAR 707 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVEND 667 ++L LT A R ++G + SRF+ ++P + V+ R + + + + V + Sbjct: 708 RQLYLTRAAARTVFGDTMNMPASRFLNDIPAQYVDNRRELTDMD---LYGGLASRGVAAE 764 Query: 668 SGYKLGQR 675 Y G R Sbjct: 765 DSYGYGSR 772 Score = 59.8 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 31/74 (41%) Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 LR + + +GQ+V H +G+G ++ +EG G + +V F+ Sbjct: 826 LRESGESSQPKKSAKPKAAAEIPALHVGQQVHHDIYGDGKVLGLEGEGTGAIARVKFKTG 885 Query: 706 GIKWLVAAYARLES 719 K L+ +A L Sbjct: 886 ATKRLLLKFAPLTP 899 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 290/820 (35%), Positives = 418/820 (50%), Gaps = 108/820 (13%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + +DSLN QREAV LLVLAGAGSGKTRVL +RIA L+ + +P+ I+A+ Sbjct: 1 MSID--IDSLNGPQREAVVTVDGPLLVLAGAGSGKTRVLTYRIANLIENHDVAPWEILAI 58 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ L+G GMWV TFH + R+LR+ ++F I D++DQ Sbjct: 59 TFTNKAAAEMRERLNGLVGPRCRGMWVSTFHSMCVRMLRSDAEKLGFTRNFTIYDTDDQK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQE 179 RL K ++ +++D K++P M I++ K+E + P + G+PV + +VY QE Sbjct: 119 RLYKEIMAELDIDPKRFPVNALMNRISTAKNELVVPSAFEKEAGDPVGKVASRVYSRLQE 178 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A DF +LLL A+ L N + Y++RF I+VDE+QDTN+ QY+ LLA Sbjct: 179 RLKAANAFDFDDLLLYAYLLLKNHEDVRSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEG 238 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +M+VGDDDQSIY WRGA + NI F D+P A T++LEQNYRS N+L+AANA+I N Sbjct: 239 HKNIMVVGDDDQSIYSWRGADLRNILEFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIAN 298 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R KKL+T DG+ I +Y A +E DE R++ I+ + G + + A+ YR+NAQ Sbjct: 299 NQHRKAKKLFTSAEDGDKIQVYMAADERDEGRWIAGEIEKQRAAGLSYNQVAVFYRTNAQ 358 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+LE+ LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG Sbjct: 359 SRMLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINVPRRGIG 418 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T++ + Q +R+ +T + + + L A A+ F+ L++ D L Sbjct: 419 KTTIERIEQFAREMGMTFMEGAELAIVDPELRASARQAIGEFVGLVNEARTYGGD--LRK 476 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM---------- 529 + +I SGL + E ++ + RIEN++E + +F+ EDED + Sbjct: 477 VIETIIDKSGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHEDEDALYEAPTAEPAD 536 Query: 530 ------------------------------------------PLQAFLSHAALEAGEGQA 547 L F+ L Sbjct: 537 APALAPVPSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFIEWVRLRTDLDTV 596 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 AV +MT+HS+KGLEF VF+ GMEE +FP S+ + +EEERRLAYV +TRA Sbjct: 597 AEDGHAVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNSVGDAAGIEEERRLAYVAITRAR 656 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT------ 661 +KL LT A R+++G+ + SRFI E+P E + L + ++ G+ Sbjct: 657 KKLFLTCAYARQIFGQTSSNPISRFIQEIPSELRQTTGLGSAGFSGTGWEKRGSRKGIAG 716 Query: 662 ----------------------------------------PMVENDSGYKLGQRVRHAKF 681 + G V H F Sbjct: 717 SGTEAGGGRVFGRSSASGSSGRSDERAARVGGSYVRPGAEKKAAAKMTFSTGDTVDHKTF 776 Query: 682 GEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVAAYARLESV 720 G G + ++G L V F G K L+ YA + + Sbjct: 777 GRGKVTKVDGD----TLFVKFSKTGQTKKLLKDYAPIVKI 812 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 252/736 (34%), Positives = 411/736 (55%), Gaps = 33/736 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ ++ND Q +A+ ++V+AGAGSGKTRVL +RIA+L+S +N +I+A+TFTN Sbjct: 2 NLVQNMNDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ RI L+G + +W+ TFH + R+LR H ++F ILD+ +Q ++K Sbjct: 62 KAAKEMKERIYALVGETSKYIWINTFHSMCVRILRQHIELLGYNKNFTILDTSEQKSIIK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDR 183 ++++++L E + P + I++ K+ + ++ + ++Y YQ + Sbjct: 122 NIVRSLDLSEDAYQPANVLKIISNAKNSLVSVKKMREQSRFGFMKNVAEIYAHYQSYLKK 181 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 ++DF +L+L+ L+ P +L Y+ +F I VDE+QDTN IQY I++L+ V Sbjct: 182 NSVLDFDDLMLKTIVLFKKFPEVLAIYQNQFQYIHVDEYQDTNVIQYRLIKMLSAVHKNV 241 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA +NI F DF E + L+QNYRS S IL AANA+I+NN R Sbjct: 242 CVVGDDDQSIYSWRGACSDNIINFEKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDR 301 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LW++ G IS+Y A N+ DE + +I + G + AILYR+N SR + Sbjct: 302 KEKELWSENKGGGKISVYAASNDKDETDDIAKKILELKKEGIDYKDIAILYRANYLSRQM 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E + L +PY++ G ++F +RQE++D L+YL +I NR D+ + R++N P RG+G ++ Sbjct: 362 ENSCLSFGIPYKLIGSLKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVPKRGVGASSM 421 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 D + + + ++L++A + + ++ + + ++ LI+ E + Sbjct: 422 DKIDKYAEQYGISLFEALKNIEAI-GVSKKIVTNIKLLTNLIEKY-SEVERYAIDELIIG 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 + KDSG TM ++ ++RIEN+ ELV++ +QFS + L F+S +L + Sbjct: 480 IYKDSGYETMLKESNDPYAESRIENISELVSSAKQFSSMND-----SLIDFISEMSLTSD 534 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM----SLDEGGRLEEERRLA 599 + +DAV L T+H++KGLE+ VFI+G+EE +FPS S DE ++EEERRLA Sbjct: 535 SD-DENQEDAVVLSTVHASKGLEYKVVFIMGLEENLFPSIRDAESSADEKNKMEEERRLA 593 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------------E 643 YV +TRA ++L ++YA R +G ++ SRF+ E+P + + E Sbjct: 594 YVAITRAKERLFMSYANRRMQFGSIKMNKRSRFLDEVPNKLMHFESSFGGSFESTDSNIE 653 Query: 644 VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 + + P + Y +G V H KFG+G ++N+ ++V F Sbjct: 654 QANKFISKLSPKIKISEKPKSSVSTNYSVGDTVLHKKFGDGKVLNIS----KDSVKVEFS 709 Query: 704 GQGIKWLVAAYARLES 719 G+K L+ YA L Sbjct: 710 EVGVKTLLIEYANLTR 725 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 798 bits (2061), Expect = 0.0, Method: Composition-based stats. Identities = 262/731 (35%), Positives = 406/731 (55%), Gaps = 27/731 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LND+QREAV +L+LAGAGSGKT+VL +IA+ + CS Y I+A+TFTNKA Sbjct: 4 LDNLNDRQREAVENTDGPMLILAGAGSGKTKVLTTKIAYCLEKGLCSKYEILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+ ++ + MW+GTFH + R+LR ++F + D DQ+ L+K Sbjct: 64 AKEMKERVENILQENVDSMWIGTFHAICSRILRVEIERIGFERNFTVYDRADQISLVKEC 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRA 184 +K M +D K + + I+ K+ G +I + + + +++Q Y+ R Sbjct: 124 LKDMGVDPKNVEIKNEINTISRLKNAGATEKNIDKEDFDISLSTFTMELFQKYEHKLKRY 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+++ + L+ P + + Y +RF + VDE+QDTN+ QY I+ L + Sbjct: 184 NSLDFDDLIVKTNLLFEENPDLREKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKNDNIC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGD DQSIYGWRGA ++NIQ F DF A+ I LEQNYRST IL AN +I+NN+ R Sbjct: 244 CVGDSDQSIYGWRGANIQNIQNFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT +G+ ++++DEA VV I+ + E AILYR+NAQSR+ E Sbjct: 304 DKNLWTAKNEGDMPIYRRMYSDIDEADQVVQWIEQERYRENPYEEMAILYRTNAQSRLFE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L + +P R+ GG++F++R+EIKD +SYLR++ N ND+ A R++N P RGIG T+D Sbjct: 364 ERLNRLGIPNRVVGGLKFYDRKEIKDCVSYLRIVENLNDNMALNRIINEPKRGIGKTTMD 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + Q S++R +++ Q + + A LQ F LI + ++ M + + + Sbjct: 424 KLLQCSQNRSISMMQYIID-TDLPDFSNATAKKLQEFYYLIKSFPKDQ--MNVAELMEYI 480 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + +G R E+ +TR+EN++E V++ QF + D++ L+ +L ++L Sbjct: 481 LDKTGYRANLEKSTNRDDKTRLENIDEYVSSLYQFVQDNPDKN---LREYLETSSLMTDL 537 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + D V +MT+H+AKGLEF VF G+EEG PS++ D +EEERRL YV +T Sbjct: 538 DKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTIPSRVDED----VEEERRLCYVAIT 593 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR------------ 652 RA +KL +T ++RR + + SRFI E+ + +E + R Sbjct: 594 RARKKLYITSVQSRRRFNEFQTKAESRFIEEMENKYKDESPNKEVSFRESFNTKVVDDYR 653 Query: 653 ---PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 S + + +N+ Y+ G +V H KFG G IV + L + F +G+K Sbjct: 654 TEASASITKKQNNVTKNNEKYRAGDKVSHKKFGTGVIVGIVEKENGDELTINFDKKGLKK 713 Query: 710 LVAAYARLESV 720 L ++ A L V Sbjct: 714 LNSSLAPLTRV 724 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 277/729 (37%), Positives = 400/729 (54%), Gaps = 17/729 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + +L L+ Q AV +LV+AG GSGKTRVL HR+A+L+ P+ I+AVTF Sbjct: 42 MERILIGLDADQCVAVTTTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVAVTF 101 Query: 63 TNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA E+R R+G L+GT + GTFH L R+LR L F I D EDQL Sbjct: 102 TNKAAREIRERLGGLLGTESAQLVQAGTFHSLCVRILRRDGYRIGLEPAFTIYDEEDQLA 161 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+K+ ++ + LD +++ PR + ++ K++ P +QS + ++ +VY+ Y + Sbjct: 162 LVKQALRDLGLDPQRFSPRMLLGRLSRAKNDQHSPSDLQSMAQSYWDEVAARVYERYAQY 221 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 RA VDF +LLLR EL+ P +L HY++R+ + VDE+QDTN +QY +R LA Sbjct: 222 LQRAQAVDFDDLLLRTVELFTEYPDVLAHYQDRWRYLQVDEYQDTNRLQYQLVRQLASGH 281 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQSIY WR A + NI F DFP A IRL +NYRST I++AA+A+I N Sbjct: 282 RNLCVVGDPDQSIYSWRQADIRNILEFQRDFPDATVIRLGRNYRSTPQIVAAADAVIRVN 341 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQ 359 R+ + LWT+ G PI L ++E EA VV+ I G A + A+LYR NAQ Sbjct: 342 RQRIERPLWTENPPGPPIRLLACWDEQQEAEMVVSEIDRLVRTGNARYRDIAVLYRINAQ 401 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT--RG 417 SR +EEAL++ +PY++ GG+RF+ER+EIKDAL+ LR++ N D + RV++ RG Sbjct: 402 SRSVEEALVRRQIPYQVIGGVRFYERKEIKDALALLRVLVNPRDWLSLRRVLSETAFGRG 461 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQE----KALAGRAASALQRFMELIDALAQETA 473 IG++TL + Q + +Q + L++E ALA L+ + L Sbjct: 462 IGEKTLLQLEQWGQRQQCSPADVLLLLVEEREEAPALAAATVRRLRELGGELVRLRAAMV 521 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + P D ++ SGL Y + R ENL +L + ++ E L Sbjct: 522 EHPASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYDTVPAAE---GLPL 578 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL AAL A +A+ D V L+TLH+AKGLEFP VF++G+EEG+ P +L+ LE Sbjct: 579 FLEEAALVAAIDEAEMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEAELE 638 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-----EVRLRA 648 EERRL YVG+TRA ++L L+Y +R +G PS F+ +LP + VE R+ Sbjct: 639 EERRLFYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDLPPDVVEAGSRASERVPR 698 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 H + GQRV H FG+G +V + + V F+ G K Sbjct: 699 VAPPAGGHAGPVESSAPVVPRLRAGQRVFHPAFGDGFVVAVREQAGDQEVTVQFKRHGTK 758 Query: 709 WLVAAYARL 717 L+A+ A+L Sbjct: 759 TLLASLAKL 767 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 797 bits (2059), Expect = 0.0, Method: Composition-based stats. Identities = 280/772 (36%), Positives = 407/772 (52%), Gaps = 61/772 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L +LN Q EAV L++ AGAG+GKTRV+ HRIA+L+S S++AVTFTNK Sbjct: 5 LTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLLS-LGVVSQSVLAVTFTNK 63 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA+EM+ RI L+ +WV TFH LRA +L F I D DQ ++K Sbjct: 64 AASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISLNPYFLIYDFIDQKSVVKD 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRP----HHIQSYGNPVEQTWQKVYQAYQEAC 181 +K +N+DEK++ I+ KD P +S G+ T K+Y+ YQ+ Sbjct: 124 CVKELNIDEKKFKLSIIADKISRAKDNLKFPSDMAAEAESAGDFFGITVAKIYELYQKKL 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +RA +DF +L++R +L++YRE++ I+VDE+QDTN+ QY +I+LLAG Sbjct: 184 ERADAMDFGDLIMRTVSALQRHSELLEYYREKYKYIMVDEYQDTNHAQYIFIKLLAGKYH 243 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V +VGDDDQS+Y WRGA + NI F D+P A++++LEQNYRST ILS AN +++ NN Sbjct: 244 NVCVVGDDDQSVYSWRGADINNILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVVKYNN 303 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 R+ K+LWT D +++ A NE DEA + I DN ++ A+ YR+NAQS Sbjct: 304 ARISKRLWTQNPDNGSVTVLKAVNENDEAVKIAELIYSNAYDNKCKFSDYAVFYRTNAQS 363 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + +PY I G +RF++R EIKD ++YL+LI N ND+ +F+RV+N P RGIG Sbjct: 364 RTFEDTFRLSRIPYAIVGTLRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIPRRGIGK 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +++ + ++ + +++WQ+ QE L A AL F + I + + + Sbjct: 424 TSIETLENFAQLKNMSIWQSV-PFAQEAGLTKGPAEALNSFAQFIKDFSTLKNSGSVKLI 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++VI DS E E + + +IEN++EL++A F N + L +L+ AL Sbjct: 483 VEKVITDSEYLKELEAENTPESKIKIENIQELISAVDDFEKNRSLD--KSLAGYLTQIAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 D + V LMTLH AKGLEF VFI G+EEG+FP S LEEERRL Y Sbjct: 541 MNDADSPDESKGKVTLMTLHLAKGLEFDNVFICGLEEGLFPMGESAFNDKELEEERRLMY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE--LPEECVEEVRLRATVSRPVSHQR 658 VG+TRA + L L ++ R++YGK +++ PSRFI E +E E + R + Q Sbjct: 601 VGMTRARKCLYLCWSTERKVYGKIIWNMPSRFIAEAGFKDESAEMEQNRKQNFQNRLSQG 660 Query: 659 MGTPMVEND--------------------------------------------------S 668 ++ +D S Sbjct: 661 FNRTIIHSDSFGREQNFRSFNKKSFKAEIVYTNAGSYGYMSSGGEITKAERFDNPAEDLS 720 Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 YK+G V H FG G I+ G G +L V F+ K L+A A L + Sbjct: 721 PYKIGTAVSHPVFGRGKIIEKSGVGNDLKLVVLFETGQWKKLLARIANLTLI 772 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 797 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 275/776 (35%), Positives = 423/776 (54%), Gaps = 63/776 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+SLN QR AV ++V+AGAGSGKTRVL +RIA LM ++I+A+TFTNKA Sbjct: 8 LESLNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMRE-GVDAFNILALTFTNKA 66 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ RI L+G ++ +W+GTFH + ++LR PQ+F I D++D RL+ Sbjct: 67 ANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQDSQRLING 126 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLR-------PHHIQSYGNPVEQTWQKVYQAYQ 178 +IK M LD+ + ++ I+S K+ + P +++ + ++YQ Y Sbjct: 127 IIKEMELDKDIYKYKRIQSRISSFKNSLITVRAYFNNPELMEADAMARQPRLGEIYQEYV 186 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY ++ LA Sbjct: 187 DRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYLIVKALAD 246 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDD QSIY +RGA + NI F ND+P A+ +LEQNYRST NI+ AAN++IE Sbjct: 247 RFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVEAANSVIE 306 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSN 357 +N RL K ++T+ GEPI ++ + + DE RFV + I + + A+LYR+N Sbjct: 307 HNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQHQLPNGNFAVLYRTN 366 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +QSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N ND+ A R++N P RG Sbjct: 367 SQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRIINFPARG 426 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACREL--LQEKALAGRAASALQRFMELIDALAQETADM 475 IG+ T++ + + + ++++ + L E + L F+ +I Sbjct: 427 IGETTMEKLTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNFQALNQKA 486 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--EDLMPLQA 533 ++V K +GL ++++ +G ++EN+EE++ + F +ED + L Sbjct: 487 NAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVADSRASLSE 546 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 +L AL + D V LMT+H AKGLEFP V++VGMEE +FPS MS+ LE Sbjct: 547 YLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSIQSRNDLE 606 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV------------ 641 EERRL YV +TRA ++ LTYAE R +GK PSRFI E+ E + Sbjct: 607 EERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTPSISNPNY 666 Query: 642 -------------------------------------EEVRLRATVSRPVSHQRMGTPMV 664 EE + + + + Sbjct: 667 RYKPLVDRDIFGEVDKSKLRLQKPISGIPPHKNAPIGEEQQKLRKLKPVNALYNSNSNNK 726 Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G +G V H +FG G ++++EG+G + Q+ F+ G+K ++ +A+L + Sbjct: 727 NTYNGLDIGTVVYHERFGRGKVISLEGTGNDKKAQINFETGGLKNILLRFAKLTII 782 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 263/704 (37%), Positives = 383/704 (54%), Gaps = 56/704 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 + LL+ LN +Q +AV LL+ AGAGSGKTRVL RIAW+++ P I+A+T Sbjct: 96 NPQSLLEGLNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANRKAWPSQILAIT 155 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR R+ L+G S MWV TFH ++LRAH L F I DS D R Sbjct: 156 FTNKAAAEMRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSGFSIYDSSDCER 215 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLR-PHHIQSYGNPV-------------- 166 L+K + +N+D K++ P+ + I+ K+ + ++++Y Sbjct: 216 LVKIIASELNIDIKKFTPKLLLSKISDFKNNLVTWQENLKNYAPDYKPGASVSGASSFNA 275 Query: 167 ----EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEF 222 + + VY YQ + VDF +L++ +L P + +Y+ +F ILVDE+ Sbjct: 276 AGNADALYAAVYAEYQNRLSVSNAVDFDDLIMLTVKLLRQNPQVSAYYKRKFRYILVDEY 335 Query: 223 QDTNNIQYAWIRLLAG-------------------------DTGKVMIVGDDDQSIYGWR 257 QDTN+ QY IR LAG + +VGD DQSIY +R Sbjct: 336 QDTNHAQYVLIRELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQSSITVVGDSDQSIYAFR 395 Query: 258 GAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEP 317 GA + NIQ F DFP A TI LEQNYRST IL AANA+I NN R KKLWT G P Sbjct: 396 GADIRNIQDFEQDFPSATTIMLEQNYRSTQTILDAANAVISNNANRKPKKLWTSLGKGSP 455 Query: 318 ISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 I Y A N EA +V I ++G ++ AI+YR+N+QSR LE+AL+++ +PY++ Sbjct: 456 IVGYVADNAQGEASWVAQEIARLAGEDGVNYSDIAIMYRANSQSRSLEDALIKSGLPYQL 515 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 GG +F+ER+E+KDAL+YL+ IAN +DD R++N P RG+G R + +++ ++ Sbjct: 516 VGGTKFYERREVKDALAYLQSIANPDDDVNMRRILNVPKRGLGARAESQITSYAKENSIS 575 Query: 437 LWQAC---RELLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQTDRVIKDSGLR 491 W A ++ ++ ++ R +AL+ F +L+ +L + D + V+ +SGL Sbjct: 576 FWSALSQIDKIAEQIGISSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLNESGLL 635 Query: 492 TMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ 551 + K + + R++NL +L + ++ N D ++ FL AL A Q Sbjct: 636 QDLRESKDPQDEFRVDNLSQLQSVAAEYEQNTPDANVA---GFLETTALVADSDQLPDQG 692 Query: 552 D---AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 + V LMTLH+AKGLE+P VF+ GME+G FP +D L EERRLAYVG+TRA + Sbjct: 693 EDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRCVDNQKELCEERRLAYVGITRAKK 752 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 L +T+A R +GK S+F+ E+P + + R A V R Sbjct: 753 ILYVTWAAERSQWGKSAEMIQSQFLDEIPADLISWKRKEADVMR 796 Score = 67.9 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%) Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 N + + G ++ H +G GT++ + G +S + V F G+K L+ A +E + Sbjct: 910 NINDFHEGDKISHDTYGLGTVLKTQDKGRNSIITVDFGSDGVKRLMLRVAPIEKL 964 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 274/736 (37%), Positives = 380/736 (51%), Gaps = 61/736 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN +QR AV S LL++AGAGSGKTRVL HRIA+L++ I+A+ Sbjct: 71 LDPEALLDGLNPQQRAAVEHHGSPLLIVAGAGSGKTRVLTHRIAYLLATGRARAGEILAI 130 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ L+G + MWV TFH R+LR + L F I D+ D Sbjct: 131 TFTNKAAAEMRERVEHLVGPAASRMWVSTFHSACVRILRREYKVLGLRSSFSIYDAADSQ 190 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL+ + + +NLD K++P R I+ K+E + P G + VY YQ Sbjct: 191 RLVTLVTRELNLDPKKYPARGLSNRISDLKNELVTPEDYAEQGEK-DPVLADVYTRYQAR 249 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 +A +DF ++++ L P++ +HYR RF ++LVDE+QDTN+ QY ++ L G Sbjct: 250 LQQASALDFDDIIMTTVHLLQAFPNVAEHYRRRFRHVLVDEYQDTNHAQYVLVKELVGGV 309 Query: 239 -----------------------------------DTGKVMIVGDDDQSIYGWRGAQVEN 263 + G++ +VGD DQSIY +RGA + N Sbjct: 310 VSTGSTTGGGSTTGGGSTTGGGSTAGGGSTAGGDLEPGELTVVGDADQSIYAFRGATIRN 369 Query: 264 IQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCA 323 IQ F D+ A TI LEQNYRST ILSAANA+I N R K+LWT G I Y A Sbjct: 370 IQEFEQDYRDATTILLEQNYRSTQTILSAANAVISRNADRKPKRLWTAAGAGARIVGYVA 429 Query: 324 FNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRF 382 +E EARFV I D +G + AI YR+NAQSR LEE L++ +PY++ GG RF Sbjct: 430 DDEHQEARFVAEEIDRLGDSDGVRPGDVAIFYRTNAQSRSLEEVLVRVGLPYKVVGGTRF 489 Query: 383 FERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR 442 +ER+EIKDA++YLR +AN +DD RV+N P RG+G+R +V + +++ A Sbjct: 490 YERREIKDAIAYLRALANPDDDVNLRRVLNVPKRGLGERAEALVAGLAERERISFGAALD 549 Query: 443 ELLQEKALAGRAASALQRFMELIDALAQET-ADMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 ++ R + L+ F +L+ L A P V+ +G + Sbjct: 550 RAEDVPGMSTRTLNPLRGFRDLMRGLRALVEAGEPPAAILGAVLDRTGYLAELRASDDPQ 609 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTW----------- 550 +R+ENL EL +FS + + L FL +L A Q Sbjct: 610 DASRVENLAELHAVATEFSQTDPEG---SLVDFLERVSLVADSDQIPDEDVADGEAEQEP 666 Query: 551 ---QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 Q V LMTLH+AKGLEFP VF+ GME+G FP SL + L EERRLAYVG+TRA Sbjct: 667 KVDQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPHMRSLHDDAELAEERRLAYVGITRAR 726 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVEND 667 ++L L+ A R +G PSRF+ ++PE+ + R ++ + R G Sbjct: 727 ERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDLWDWRRKESS----TQYLRGGGSAWGAR 782 Query: 668 SGYKLGQRVRHAKFGE 683 G R + +GE Sbjct: 783 GSGAYGSGARGSSWGE 798 Score = 64.8 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%) Query: 668 SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G RV H +G G +V++EG+G ++ ++ F G K L+ Y+ + + Sbjct: 844 PSLAVGDRVTHDAYGLGKVVSVEGTGPNAVAKIDFGTDGTKRLLLRYSPVTKL 896 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 792 bits (2047), Expect = 0.0, Method: Composition-based stats. Identities = 263/753 (34%), Positives = 401/753 (53%), Gaps = 41/753 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D + LL L QR AV LL+LAGAGSGKTRV+ R+A+L+ ++I+A+T Sbjct: 3 DDADLLADLTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLLRA-GVRAHNILAIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM++R+ +L + +WV TFH L RLLR + ++F I D++D+ + Sbjct: 62 FTNKAAGEMKNRVEKLAPGN--RVWVSTFHSLGARLLRQYAERLGFDRNFTIYDTDDRNK 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+K ++A +D ++ P + I+ K++ + P + + ++T VY Y++ Sbjct: 120 LVKDALEAAGIDNVKFTPERIAGAISKAKNQLVTPPQYERTATDFFQKTVAAVYPRYEKR 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +LL + RF I++DE+QDTN+ QY ++ L+ + Sbjct: 180 LRSANAMDFDDLLYLPAMALKQNEELRAELDSRFRYIMIDEYQDTNSAQYQIVKQLSINN 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V +VGD DQSIY WRG+ ++ I F DFP A TI L QNYRST +I+ AA+ LI++N Sbjct: 240 PNVCVVGDPDQSIYKWRGSDIKIILDFERDFPNARTITLAQNYRSTKSIIRAASVLIDHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQ 359 R K L TD GEP+++ N LDEA VV RIK G + AI R NA Sbjct: 300 KQRKKKDLVTDNPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAGTFKYRDHAIFMRINAL 359 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +R LE A ++ +P++I G+ FFER+E +D L+YLRL+ N +D +F RVVN P RGIG Sbjct: 360 TRSLESAFVKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVVNAPARGIG 419 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 +LD ++ + +++ L A ++ + + G+AA+ L+ F L+ L + D P H Sbjct: 420 KVSLDKLQSFAASQEIGLLAAAGQIAKITEIKGKAATGLRDFHRLMTDLRSKM-DQPPHE 478 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 V+ SG M E+ R+ N+ ELVTA +QF + + FL Sbjct: 479 LVRLVLDKSGYEAMLRDSTDEEDADRLANVSELVTAAKQFWDEDNSR---TITDFLEQIT 535 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + D D V +MTLH++KGLEFP V+I+ +E+G+ P + SL +EEERRL Sbjct: 536 LASDTDGWDEQADHVSVMTLHASKGLEFPAVYILAVEQGLLPHERSLANDEEIEEERRLC 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV---------------EEV 644 +VG+TRAM++L L +A R G+ Y S+FI ELP + +E Sbjct: 596 FVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPRDVRFIDPSMARNVARTAADEW 655 Query: 645 RLRATV-----------------SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 R++++ SR + T D+G +G V+H +FG G + Sbjct: 656 RVKSSAAAKDWADTGLRPLIPPASRKPNPGLKPTIPDAPDTGLAVGVLVQHEEFGIGNVA 715 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G +++V F G+K V +L+ + Sbjct: 716 EVSGFGALRKVRVRFAAHGVKLFVGDKIKLKVI 748 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 333/722 (46%), Positives = 460/722 (63%), Gaps = 12/722 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ +L LN QR+AV + V+AGAGSGKTRVLV R+ WLM+V C PY ++A+ Sbjct: 1 MNIDTILSGLNAAQRDAVTTKERIVRVIAGAGSGKTRVLVQRMQWLMTVAGCMPYQLLAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ Q S +W+GTFH + R+LR + + F ++DS+DQL Sbjct: 61 TFTNKAAQEMRQRLEQSAACSLNQLWMGTFHSICLRILRQYAELVGWEKSFIVIDSDDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL+KRL++ N +E+ + IN+ K+ GLR + + P+E YQ Y+ Sbjct: 121 RLIKRLLQKNNWNEEILSAKAVQAQINAYKENGLRAADLPTSAPPLEIAVHHFYQEYEHI 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + G +DFAELLL EL + Q + +RF IL+DEFQDTN +Q+ + L Sbjct: 181 TRQQGTMDFAELLLLTTELLAQHETVQQRFHQRFQAILIDEFQDTNTLQFKLVTQLCAPE 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGAQ+++I +P TIRLEQNYRST IL+AANA+I +N Sbjct: 241 TQLFVVGDDDQSIYGWRGAQIDHIVHLERYYPTVHTIRLEQNYRSTKTILAAANAVIAHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RLGK LW+DG GE I+LY A NE DEAR++V I + +GGA +CAILYRSNA S Sbjct: 301 QTRLGKTLWSDGKHGEAIALYAAVNEYDEARYLVENIAQFHQHGGAYDQCAILYRSNALS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EEAL+Q ++PYRIYGG+RFFER EIKDAL+YLRL+ +DDAA ER++N P RGIG Sbjct: 361 RIYEEALIQKNIPYRIYGGLRFFERAEIKDALAYLRLLHYPDDDAALERIINQPPRGIGA 420 Query: 421 RTLDVVRQTSRDRQLTLWQAC-RELLQEKALAGRAASALQRFMELIDALAQETA-DMPLH 478 +T++ VR ++ Q +LW+ + L E+ + RA +AL++F LI + L Sbjct: 421 KTMEDVRLLAQRVQCSLWRVITDDALLEQKCSARAQNALRQFRALIIKMTAFAERSDSLR 480 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+ +SGL E+ + R ENL EL+ A + ++ D D + FL+ A Sbjct: 481 DILKMVVDESGLYAALTNNNQEETENRRENLHELI-AAGDYQSDQNDADHDKIADFLAMA 539 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L+AG+ +T VQLMTLHSAKGLEF +V++V +EEG+FP+ SL+ +LEEERRL Sbjct: 540 SLDAGDK--ETNAHGVQLMTLHSAKGLEFNRVYMVALEEGLFPNARSLENSAQLEEERRL 597 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 AYVG+TRA ++LT+++AE RR YG++ Y RPSRF+ E+P E + + RPV R Sbjct: 598 AYVGITRAREQLTMSFAERRRYYGQDNYARPSRFLNEIPPELL-------NMVRPVLFNR 650 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 ++ D+ +K G V+HA+FG G I +EGSGEH R V F G KWLV AYA+L+ Sbjct: 651 TQPNDIQEDNPWKTGVCVQHAQFGTGVIQAVEGSGEHQRALVKFTTVGEKWLVLAYAKLK 710 Query: 719 SV 720 + Sbjct: 711 IL 712 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 275/774 (35%), Positives = 424/774 (54%), Gaps = 56/774 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 ++ L LND QR V ++V+AGAGSGKTRVL +RIA+LM+ + ++I+++T Sbjct: 14 NLEAYLAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLMN-QGVDAFNILSLT 72 Query: 62 FTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAA EM+ RI +++G+ +W+GTFH + ++LR P +F I D++D Sbjct: 73 FTNKAAREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSH 132 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLR-------PHHIQSYGNPVEQTWQKV 173 +++ +IK M LD+ + +Q I+S K+ + P ++ + ++ Sbjct: 133 SVIRAIIKEMRLDKDVYKYKQVYNRISSYKNSLITVKAYFQNPELQEADAMSKKPRLGEI 192 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+AY + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY + Sbjct: 193 YKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQSRFKYILVDEYQDTNHSQYLIV 252 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 R L+ + +VGDD QSIY +RGA + NI F D+ + RLEQNYRS+ NI+ AA Sbjct: 253 RALSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAA 312 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAI 352 N++I+ N +L K +WT DG I + + +E R+V + I + N + AI Sbjct: 313 NSIIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQMDNGDFAI 372 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NAQSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N D+ A +RV+N Sbjct: 373 LYRTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEALKRVIN 432 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-EKALAGRAASALQRFMELIDALAQE 471 P+RGIG T+D + + ++++++ + + + E + + L F+ +I + A Sbjct: 433 YPSRGIGQTTMDRLAIAANQHKISMFEVIKNIDKLELKINRGTQTKLVNFVNMIRSFAIM 492 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--EDLM 529 + V K +GL +++ +G RIEN+EEL+ R F +++ + Sbjct: 493 NETSDAFQIAETVTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDFVEGQKELADATG 552 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L FL AL D V LMT+H AKGLEFP V+IVGMEE +FPS MS++ Sbjct: 553 SLSEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTR 612 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE----------- 638 LEEERRL YV +TRA ++ LTY +R +GK V PSRFI E+ + Sbjct: 613 SELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMVPQDD 672 Query: 639 -------------ECVEEVRLRATVSRPVSHQRMGTPMVE-------------------N 666 + V++ +LR T + + P E N Sbjct: 673 YKYKPLIDTDIFGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKLKPAATEPSKARN 732 Query: 667 DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 G V H +FG GT++ +EG G+ + ++ F GIK L+ +A+L+ + Sbjct: 733 TLDLAEGNEVEHMRFGRGTVMKLEGVGQDRKAEIEFDQGGIKKLLLRFAKLKVL 786 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 267/755 (35%), Positives = 415/755 (54%), Gaps = 42/755 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN +Q++AV + ++++AGAGSGKTRV+ RIA++++ ENC+P I+A+TF Sbjct: 15 LETLLKSLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTF 74 Query: 63 TNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EMR R+ +++GT S G+W+GTFH RLLR H D+ I D++D Sbjct: 75 TNKAANEMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSDYTIYDADDSKN 134 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEA 180 L+K++I + + P I+ K+ + P + Q+ + + + +V+ Y E Sbjct: 135 LIKQIITELGIATDVLAPNAVQGKISMAKNRLVTPEQMSQNASDFISEKTAEVFYKYNER 194 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LL++ +L+ P IL HY+ERF I++DE+QDTN QY ++LAG Sbjct: 195 LQKNNALDFDDLLIKPIKLFNEHPEILAHYQERFQYIMIDEYQDTNRAQYIVAKMLAGQH 254 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIY WRGA + NI F ND+ A RLE+NYR T IL AN +I NN Sbjct: 255 RNICVVGDDAQSIYSWRGADIANILGFQNDYKEATICRLEENYRCTKTILKVANTVISNN 314 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQ 359 +L K L+T GEP++L+ A +E EA V I+ + +G ++ AI YR+NAQ Sbjct: 315 KEQLEKTLYTSNETGEPVTLFEATDERREAEKVAMAIRERKLSSGNQNSDFAIFYRTNAQ 374 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE+AL + YR++GG+ F++R+EIKD ++YLR I N D+ + R++N P RG+G Sbjct: 375 SRALEDALRFNGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLLRIINFPARGVG 434 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + +L ++ + + +L++A L R SAL F LI+ L + + Sbjct: 435 ETSLKRLKDIAIEEGFSLYEAICRATHY-DLQNRLISALNDFRMLIEDLREIAQQHTAYE 493 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +++ + L + + E + R +NL+E + RQF ++ L AFL A+ Sbjct: 494 VVAELLRKTRLLEILKNENTAEANARYDNLQEFLNFARQFCDKSAEDP--SLNAFLQSAS 551 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + AD + V LMT+H+AKGLEFP VF+ G+EE +FP E Sbjct: 552 LATDQDNADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFPLNPDEPRELEEERRL--F 609 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP--------EECVEEVRLR---- 647 YV +TRA +KL +++A++R +G+ + SRFI EL + ++E+RL+ Sbjct: 610 YVALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEELDGGSVVTEGGKLLDEIRLQDAEK 669 Query: 648 ----------------------ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 V+ S Q T S +G +V+H FG G Sbjct: 670 SRYHYDDSEYTSRSNFSDRAQSRRVAPAASRQTSLTSSSAKKSAIAVGMKVQHKIFGTGK 729 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 ++ ++GSG+ ++++V F+G G K LV YA L V Sbjct: 730 VMAVQGSGDDTKIKVFFRGAGEKTLVLKYANLTVV 764 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 265/739 (35%), Positives = 413/739 (55%), Gaps = 26/739 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ L LND QR+AV A ++VLAGAGSGKTRV+ +RIAWL+ S +I+A+TF Sbjct: 1 MTDFLLDLNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTF 60 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EMRHR+ L+ S GG+W+GTFH + RLLR ++F I D++D Sbjct: 61 TNKAAGEMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKS 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEA 180 L+++ + +N+ P I+ K+ + P + S G+ +Q KVY Y Sbjct: 121 LIRQSMGELNISPDSVPLNTLQGIISRAKNSFILPEEFRRSAGDYNQQIAAKVYDLYTRK 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF +LL++ EL+ P +L+ ++ F +L+DE+QDTN QY ++L+ Sbjct: 181 LRENNALDFDDLLIKPLELFREHPMVLEALQDTFRYLLIDEYQDTNKAQYLAAKMLSAKH 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIY WRGA + NI F +D+ A T +L +NYRST IL AAN++I NN Sbjct: 241 RNIFVVGDDAQSIYSWRGADISNILNFQDDYTDALTFKLVENYRSTGTILQAANSVIRNN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQ 359 ++ K+L + + G+P++L A NE EA + I + + + G A+ YR+NAQ Sbjct: 301 LRQIKKELVSHRSAGDPLTLIEARNERHEAEKIGEYIHSIRIEKGYEFRSFAVFYRTNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRVLE+ + Q +PY+I+G + F++R+EIKDA++YLR + N D + R++N P R IG Sbjct: 361 SRVLEDLMRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPPRKIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + ++ +R+ + +TL++A E R ++L+ F LI+AL ++ Sbjct: 421 ETSIGKLREFAEAEGITLYEAITRA-DEGQFQSRLVNSLKGFSSLIEALRLLAETGTVYA 479 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + + + + ++E + R ENL+EL++ R FS N D+ L FL + Sbjct: 480 VLTELFSLTSIPLLLKEENTAESLARHENLQELLSMARDFSDNNPDQG--SLGDFLETIS 537 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + ++ + V LMT+H++KGLEFP VFI G+EE +FP ++ E +LEEERRL Sbjct: 538 LASNYDESQDSDNYVSLMTVHASKGLEFPVVFITGLEERLFP--LNCYEPEQLEEERRLF 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV------------EEVRLR 647 YV +TRA +K+ L++A+TR LYG+ Y S FI E+ V E R Sbjct: 596 YVAMTRAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTESGTVLADRKERQGTR 655 Query: 648 ATVSRPVSHQRMGTPMVE------NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 V +++ V +SG + G V HA FG+GT+++++G G + + Sbjct: 656 NAVPESGGYRQRPAGAVSAPSQKPRESGLREGSTVHHAVFGQGTVLDVQGRGAGQKALIR 715 Query: 702 FQGQGIKWLVAAYARLESV 720 F+ G K L+ YA L + Sbjct: 716 FRNAGEKTLMVQYANLRVL 734 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 268/689 (38%), Positives = 383/689 (55%), Gaps = 44/689 (6%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L+ LN++Q +AV LL+ AGAGSGKTRVL RIAW+++ P ++A+TFT Sbjct: 45 QELIGDLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFGAWPSQVLAITFT 104 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEMR R+G L+G MWV TFH R+LR L F I D+ D RL+ Sbjct: 105 NKAAAEMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGFTIYDTADCERLI 164 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDE-----------------GLRPHHIQSYGNPV 166 K + N+D K++ PR + I+ K++ G+R + G+P Sbjct: 165 KLVCADFNIDIKRFTPRSILARISDYKNQLTDASTALAQYAPDFKPGMRHYSFGQIGDP- 223 Query: 167 EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN 226 E + VY YQ A VDF +L++R EL +PH+ ++YR +F ILVDE+QDTN Sbjct: 224 EPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVAEYYRHKFRYILVDEYQDTN 283 Query: 227 NIQYAWIRLLAGDTGK-----------------VMIVGDDDQSIYGWRGAQVENIQRFLN 269 + QY +R LAG V +VGD DQSIY +RGA + NIQ F Sbjct: 284 HAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSDQSIYAFRGADIRNIQDFEK 343 Query: 270 DFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDE 329 DFP A TI LEQNYRST IL AANA+I +N+ R KKLWT +G+ I Y A E Sbjct: 344 DFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKIIGYAADTAQLE 403 Query: 330 ARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEI 388 A ++ +I + G ++ AI+YR+NAQSR LEE L+QA +PY++ GG +F+ER+E+ Sbjct: 404 AHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQAHIPYQLIGGTKFYERREV 463 Query: 389 KDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK 448 KDA++YL+ I N DD R++N P RG+G R + + + T W A +L + Sbjct: 464 KDAIAYLQAIVNPADDINMRRILNVPKRGLGTRAESQLTLFANEHNQTFWWAIEQLEDIE 523 Query: 449 ALAGRAASALQRFMELIDALAQETA--DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 ++ R A+A++ F EL+ +L D +V++ S + + + + + ++R+ Sbjct: 524 GMSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQVLEQSHMLELLRKSEDPQDESRV 583 Query: 507 ENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTW---QDAVQLMTLHSAK 563 ENL +L + +F N D L FL AL A Q V LMTLH+AK Sbjct: 584 ENLSQLQSVAAEFEQNTPD---TTLAGFLETTALVADSDQLPGEGHDSGKVTLMTLHTAK 640 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+P VF+ GME+G FP +++ L EERRLAYVG+TRA ++L LT A R +G+ Sbjct: 641 GLEYPIVFLTGMEQGTFPHSRAMENMDELSEERRLAYVGITRAKRRLYLTRAAVRAQWGR 700 Query: 624 EVYHRPSRFIGELPEECVEEVRLRATVSR 652 + PS+F+ E+P+ ++ R A + R Sbjct: 701 QSEMMPSQFLDEIPDSLIDWKRREAGMER 729 Score = 69.8 bits (170), Expect = 4e-10, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 N + + +G R+ H +FG G +V + G++S + V F G+K L+ A +E + Sbjct: 885 NIADFHVGDRITHDRFGLGKVVQTQDKGKNSVITVDFGSTGVKRLMLRLAPIEKL 939 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 284/795 (35%), Positives = 413/795 (51%), Gaps = 90/795 (11%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN---------------- 51 +LN +QR+A A LL+LAGAGSGKT VL+HRIA LM Sbjct: 34 QNLNPEQRKAALATEGPLLLLAGAGSGKTTVLIHRIANLMKYGRGSDCDEVPEWVTAEDL 93 Query: 52 --------------------------CSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGM 85 P+SI+A+TFTNKAA E++ R+ +++G S + Sbjct: 94 AFLEGYVAHPDPEKKAEQERLCRVDPAVPWSIIAITFTNKAAGELKERLERMLGPSANDI 153 Query: 86 WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWY 145 W TFH R+LR + F I D+ D R++K +IK NLD+K +P + + Y Sbjct: 154 WASTFHSACVRILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDFNLDDKAFPAKSIVGY 213 Query: 146 INSQKDEGL----RPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWL 201 I+ KD + G+ KVY Y++ A +DF +++L L Sbjct: 214 ISRAKDAMKLGADYLAECEKSGDYRLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLK 273 Query: 202 NKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQV 261 + ++Y+ +F +L+DE+QDTNN+QY LAG + +VGDDDQSIY +RGA + Sbjct: 274 EFDEVREYYQRKFRYVLIDEYQDTNNLQYLLASTLAGGYENICVVGDDDQSIYRFRGATI 333 Query: 262 ENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLY 321 ENI F + + GA IRLEQNYRST NIL A+NA+I NN GR GK+LWTD +G+ + Y Sbjct: 334 ENILSFESQYKGARVIRLEQNYRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQCY 393 Query: 322 CAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMR 381 A NE DEA++V +I G + A+LYR NAQS +E+A + +PYRI GG+R Sbjct: 394 TAMNEHDEAQYVAAQILGSFSAGRHWKDHAVLYRMNAQSNQIEQAFKRNGVPYRIIGGIR 453 Query: 382 FFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC 441 FF+R EIKD L+YL +I N DD +R++N P RGIG T++ + + +LW+ Sbjct: 454 FFDRAEIKDMLAYLCVINNPGDDLRLQRIINNPPRGIGATTIERAQTIAAQEGRSLWEII 513 Query: 442 RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 L +AA+ L F ++I L + + +M L + ++ +G M EQ+ + Sbjct: 514 SNARVYPELQ-KAAAKLASFTDMIAELRKLSGEMELPAFYEELVARTGYAVMLEQKNTIE 572 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHS 561 +TR+EN++EL+T+ + N + L FL AL D +D V +MT+HS Sbjct: 573 DRTRLENVQELLTSINGYLENAVE---PSLAGFLDEIALYTDLDSHDPEEDCVVMMTMHS 629 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 AKGLEFP VF+VG+EEG+FP ++ E +EEERRL YV +TRA +KL +T A R L+ Sbjct: 630 AKGLEFPVVFVVGVEEGIFPGIRAIGEAEEMEEERRLCYVAMTRAKEKLYMTCASQRMLF 689 Query: 622 GKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDS------------- 668 G+ +RPSRF+GE+PEE VE+ R Q P + + Sbjct: 690 GRTNNNRPSRFLGEIPEEYVEKSGRLPRSERTEEKQDGEQPKKKAPAWRKPAERGYSLGG 749 Query: 669 ---------------------------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 ++ G V+H FG+G +VN+ G + +++A Sbjct: 750 GYTTYPKGTAVEPKIGGGGAKSAAGLADFRKGDMVQHKAFGKGMVVNLMPMGGDALIEIA 809 Query: 702 FQGQGIKWLVAAYAR 716 F G K L+ A Sbjct: 810 FDNVGTKKLMLKSAS 824 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 262/651 (40%), Positives = 371/651 (56%), Gaps = 4/651 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D+ + LN Q EAV LVLAGAGSGKTRVL RIA L+ N +P+ I+AV Sbjct: 20 LDLDAITRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTTRIARLIGTMNVAPHEILAV 79 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RI + +G GMW GTFH L R+LR Q+F I D +D + Sbjct: 80 TFTNKAAGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGVAPLVGREQNFTIYDEDDAI 139 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQE 179 +KR+++ NL K++ P+ + I+S K+ + P ++ + VY + Sbjct: 140 GAVKRVMERRNLSPKEFAPKAILSAISSAKNALISPSEFARNARDTFATAVAGVYTDLEV 199 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +A V F +LL+ + HY+ RF +LVDE+QDTN QY +++L+ G Sbjct: 200 ALQQANAVTFDDLLVLPVRALETDEALRAHYQRRFRYLLVDEYQDTNAAQYRFVQLMGGG 259 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 VM+VGDDDQSIYGWRGA + NI F DFPGA +RLE+NYRST N+L+ ANA+I Sbjct: 260 YRNVMVVGDDDQSIYGWRGADIRNILDFERDFPGARIVRLEENYRSTPNVLALANAVIAE 319 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNA 358 N R GK L GE ++L A +E DEA F+ I + A +CAILYR+NA Sbjct: 320 NTERRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTRMSRSDLARRDCAILYRTNA 379 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR +E+A + ++PYR+ G +RF++R+EI+D ++YL+L+AN DD AF R VN P RG+ Sbjct: 380 QSRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNVPKRGL 439 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD T+ ++ + + + + + A +AL+ F L+ L D + Sbjct: 440 GDATIALLAEQAIAEGKPMLEMATRFDVLSGMRPAARAALEDFGNLVQRLRTMAVDAAVD 499 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE-DLMPLQAFLSH 537 +++ E G +G RIEN+ E++ + +E E L PL FL Sbjct: 500 ELLRELVQVIKYADHLRAE-GPEGLERIENVREMIAGAAEVVADEGGEVGLTPLDHFLQS 558 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 + L AG + D DAV MT+H+AKGLEFP VF+ G+E+G+FP + ++ +LEEERR Sbjct: 559 STLVAGVDKLDPNADAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARAAEDPAQLEEERR 618 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 L YVG+TRA +KL LT AE RR G+ +Y PSRF+ + E + Sbjct: 619 LFYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAERGKTAR 669 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 4/79 (5%) Query: 645 RLRATVSRPVSHQRMGTPMVENDS--GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 + S P +R P E+ ++ G+RV+HAKFG GTI + GSG +++++ F Sbjct: 739 KAPGGFSTPARRERAPEPEDESQDAPMFRPGERVKHAKFGTGTIAELSGSGRDTKVRIDF 798 Query: 703 QGQ--GIKWLVAAYARLES 719 + G K LV A A+LE Sbjct: 799 DDEEIGRKTLVLAQAKLER 817 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 274/723 (37%), Positives = 399/723 (55%), Gaps = 33/723 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + LN++Q+EAVA +VLAGAGSGKTRVL RI L+ + P+ IMA+TF Sbjct: 1 MQNIFADLNEQQKEAVAHVDGPCMVLAGAGSGKTRVLTRRIVHLVK-QGIPPHRIMAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ ++ W+ TFH +R+LR + + F I+D + L Sbjct: 60 TNKAAQEMRSRVISMLP-DFNSQWIQTFHSTCNRILRMDIQELGFDKYFSIIDDTEAKSL 118 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQE 179 +K L++ N + + + ++ K+ +P + + +++ +V+ Y Sbjct: 119 IKTLLREEN--DYETKAEELLYIFKQAKNSLEKPEKYFYSFAVPDFIKERNCRVFSLYNS 176 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 ++DF +L++ L+ P +L+ Y+ F I+VDE+QDTN QY W RLLA Sbjct: 177 RLKNLNVLDFEDLIVLCIRLFQQNPDVLEKYQGWFQYIMVDEYQDTNYSQYFWARLLASR 236 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQSIY WRGA+ NI+RFL D+P + I+LE NYRS+ NILSAANA+I N Sbjct: 237 HHNIFVVGDPDQSIYSWRGAEPYNIKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICN 296 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N R K+L+T GE + +CA + EARF+ + I + + A+ YR++A Sbjct: 297 NEEREEKQLYTQKGQGEKLVHFCAGDSFQEARFIADEINQLLRSENRHFQDFAVFYRTHA 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LEEALL ++PY I G +F+ER+EIKD L+YLRL++N ND +FERV+N P RGI Sbjct: 357 QSRALEEALLYRNIPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVPRRGI 416 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPL 477 G++TL ++ S +R ++L E + + +A++ F ++ L T+ L Sbjct: 417 GEKTLGRIKAYSEERGISLLDVLAEAESIPGIGRKMLTAMEDFYGMLKYLTDLVTSGASL 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 ++VI+ +G ++ K + RIENL+EL + +F E E L+ FLS Sbjct: 477 MELLEQVIEVTGYIEELKKSKATDAEARIENLQELRSLVVEF----EREGGQGLEEFLSQ 532 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + D D V LMTLH AKGLEFP VFI G+EEG+FPS S +EEERR Sbjct: 533 TALVQESDELDN-SDHVLLMTLHGAKGLEFPVVFITGLEEGVFPSYRS-QTAEEMEEERR 590 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA ++L L++A +R LYG E + PSRF+ E+PEE + Sbjct: 591 LCYVGITRAQERLYLSHALSRLLYGYERSNPPSRFLYEIPEELL---------------- 634 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 ++ G RV HAKFG G I + + E V F G + L A L Sbjct: 635 LSPQQKKVAKPVFQAGDRVLHAKFGMGIISEL--NEEEQIAVVEFVQAGTRMLRLDIAPL 692 Query: 718 ESV 720 E + Sbjct: 693 EKI 695 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 263/680 (38%), Positives = 389/680 (57%), Gaps = 47/680 (6%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-------------------- 48 LN QR+AV LL+LAGAGSGKT VLV+RIA ++ Sbjct: 22 RLNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFGSAHGSKELPRTVTQQDLE 81 Query: 49 --------------------VENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGG-MWV 87 V P++++A+TFTNKAA E++ R+ ++G + GG + Sbjct: 82 DLRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGELKERLRAMLGETMGGDVNA 141 Query: 88 GTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYIN 147 TFH R+LR P+ F I DS+DQ R+LK++ K +D+K P + A+ I+ Sbjct: 142 STFHSACVRILRRDAERIGFPKSFTIYDSDDQQRVLKQIYKDKMIDDKFLPIKSAVSQIS 201 Query: 148 SQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPH 205 S KD+ + P + + + K+Y Y AG +DF +L+ L Sbjct: 202 SYKDKLMSPEDVAAETPRDTKAALISKIYTTYAGRLKTAGAMDFDDLIYHTVRLLQTDAE 261 Query: 206 ILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ 265 ++Y+ +F ++VDE+QDT+ Q+ +RLLAG T V +VGDDDQSIY +RGA +ENI Sbjct: 262 AREYYQNKFRYVVVDEYQDTSIAQFHLVRLLAGGTNNVCVVGDDDQSIYKFRGATIENIL 321 Query: 266 RFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFN 325 F F GA+TIRLEQNYRSTSNIL+AAN++I+NN GR GK LWT+ DG+ + Y A + Sbjct: 322 NFEQVFTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVHHYTAAS 381 Query: 326 ELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFER 385 E DEA + + I G L + A+LYR NAQS +E +A +PYRI GG RFF+R Sbjct: 382 EQDEASHIADVIGEHLREGAHLRDHAVLYRMNAQSNPIETYFARAGIPYRIVGGQRFFDR 441 Query: 386 QEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELL 445 +E+KD SYL +I N DD R++N P R IG T+D V + + + + + Q ++ Sbjct: 442 KEVKDINSYLAVIVNPRDDVRLRRIINEPARKIGASTVDKVGELAARQGVPMLQIIADVR 501 Query: 446 QEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTR 505 Q L RAA++L++F E+ L + +PL VIK +G M + +K E+G+TR Sbjct: 502 QYPELT-RAAASLEKFYEMYRELCDLSVTIPLDEFAGEVIKKTGYEAMLKAQK-EEGETR 559 Query: 506 IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGL 565 +ENL +LV++ + ++ +++ + L FL AL + D D+V +MT+HSAKGL Sbjct: 560 LENLGQLVSSVKTYA--DQNGEDATLSGFLEEVALISDLDSYDQDADSVTMMTIHSAKGL 617 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 EFP VF+VGME+G+FP M+ +EEERRL YV +TRA ++L L+ + +R ++G+ Sbjct: 618 EFPYVFVVGMEDGIFPGDMARYNEEDMEEERRLCYVAITRAKKELYLSTSRSRLIFGQTR 677 Query: 626 YHRPSRFIGELPEECVEEVR 645 + PS F+ E+ +EE + Sbjct: 678 RNLPSCFLSEIDPGLMEETQ 697 Score = 66.4 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 24/63 (38%) Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + Y G V H FG G ++ +++ F G+K +A YA L Sbjct: 805 MQNATPKKQAVQYAAGDLVEHRVFGRGKVLKATPIAGDCIVEIQFDRVGVKKTMANYAPL 864 Query: 718 ESV 720 + + Sbjct: 865 KKI 867 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 288/761 (37%), Positives = 418/761 (54%), Gaps = 47/761 (6%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L SLND Q+ AV LV+AGAGSGKTRVLV+++ L+ P +MA+TFT Sbjct: 3 EDYLSSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIRS-GYDPARLMALTFT 61 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ +G + + +GTFH + R+LR + + +DF I D+ D LL Sbjct: 62 NKAAKEMKERVASEIGPTAYRIQMGTFHSVFSRILRENAIHLGYTRDFSIYDTNDTKSLL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQA 176 + ++K MN+D+K + I+ K++ + P + + ++Y Sbjct: 122 RHVMKRMNIDDKVYRLNAVQHRISMAKNQLISPESYAANKDLSRYDIDCRMPRMAEIYSL 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y C + +DF +LL + + L+ + P +LQ YR+R +L+DE+QDTN QY R L Sbjct: 182 YTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTYRDRIDYLLIDEYQDTNFAQYLIARQL 241 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 G+ GKV +VGDD QSIY +RGA+VENI F FPG++ +LE+NYRST +I++AAN+L Sbjct: 242 MGEKGKVFVVGDDAQSIYSFRGAKVENILGFSKSFPGSKLFKLEENYRSTQSIVNAANSL 301 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYR 355 I N GR+ K+++++ GE I L + EA V + I + ++ AILYR Sbjct: 302 IAYNEGRIPKQVFSNKQVGERIRLTGCLSGYLEAYTVADSIVERRMQEYCPYSDFAILYR 361 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSRV EEAL + ++P+RIYGG+ F+ R+EIKD L+Y RLI N NDD A RV+N P Sbjct: 362 TNAQSRVFEEALRKHNIPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVINYPK 421 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQE-KALAGRAASALQRFMELIDALAQETAD 474 RGIGD TL + + + +LW E + L+ A L F+ LI L QE+ Sbjct: 422 RGIGDTTLSRLNEIATASSRSLWDVLSESQKGFPDLSATARRRLGEFVSLIREL-QESEY 480 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDLMPLQ 532 L+ Q V+K SG+ +K +G +R ENL+EL+ ++ SY EE + L Sbjct: 481 ESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLKELLNGIEEYGTSYAEERGEKPSLG 540 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 FL+ L + D V LMT+H+AKGLEF +FIVGMEE +FPS M+ E G L Sbjct: 541 TFLNEVVLLTDQDTEGVVGDYVTLMTVHAAKGLEFKHIFIVGMEENLFPSMMNATEQG-L 599 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV-------- 644 EEERRL YV +TRA + +++A R G+ RPSRF+ EL + VE Sbjct: 600 EEERRLFYVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVERRVPQEMLGG 659 Query: 645 -----RLRATVSRPVSHQRMGTPMVENDSGYKLG--------------------QRVRHA 679 L SR + +R+ P ++G V HA Sbjct: 660 HSQGDELPIHFSRSDAFERLPQPEPIRRRLVRVGSSPVHEERMVHQQIGDLCVDDTVAHA 719 Query: 680 KFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +FG G I ++EG G++++ +V+FQ G K L+ +A+L V Sbjct: 720 RFGIGIIESLEGEGDNAKAEVSFQQVGRKRLLLRFAKLSKV 760 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 255/723 (35%), Positives = 394/723 (54%), Gaps = 30/723 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + D LN Q++AV LL+LAGAGSGKT+ L HRIA+++S P I+AVTFTNK Sbjct: 1 MSDKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGG----MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 AA EMR R+G ++ W+GTFHG+ ++LR N+P +F I D D+ Sbjct: 61 AAREMRERLGSMLNQDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDESDKKG 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEA 180 ++K+ +K++N+ +KQ A I+++K++ P + + P +Q ++Y+ Y++ Sbjct: 121 VVKQAMKSLNITDKQIKASAASGIISAEKNKMNTPEIVIANARFPYQQQIGEIYKMYEKL 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LLL L N P + + +++ F I++DE+QDTN QY + LL D Sbjct: 181 KRESNALDFDDLLLETVNLLKNHPEVRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLTNDK 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIY WRGA NI F DF GA+ I+LEQNYR+T IL AA +I N Sbjct: 241 KNICVVGDDWQSIYSWRGADFRNILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQ 359 N R KK+WT G G+P+ +Y A ++ EA ++ N I ++G + AILYR+N+Q Sbjct: 301 NQRTDKKIWTAGNQGDPVEVYSALDDKSEAAWIANVISNKVESGEYNFDDFAILYRTNSQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 S +E+AL Q S+P I GG RFF+R IKD ++Y+RL ND ++F R+ N P+RG+G Sbjct: 361 SYTIEQALNQRSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANVPSRGVG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-PLH 478 +L ++ + A ++ + + RA +ALQ + + E + Sbjct: 421 PTSLAKFISWQGQTEMDIISALKQSGEATTITARARNALQELGCKLQIIRSEILNNTAPS 480 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 ++VI +G R Y + + + E L L+ +R ++ ++ +L Sbjct: 481 DILEKVIDKTGYR-DYILDGSPQAEDNNEYLNTLIDESRPYA---------DIETYLEEV 530 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD-EGGRLEEERR 597 +L + + + V LMTLH+AKGLEFP VF+ GMEEG+ P +LD LEEERR Sbjct: 531 SLMSSSD-LQSEKGYVTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLDGNPDDLEEERR 589 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA ++L L+++ +R + + Y+ PSRF+ + V Sbjct: 590 LCYVGMTRARERLYLSHSASRYQFNQRKYNDPSRFLCDAGLFIVNNESQEEAYVESYD-- 647 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 +D ++G RV+ A FG GT+ +++G +QV F K L YA+L Sbjct: 648 -----TFYDDINLEIGTRVKSAVFGVGTVEDIDGMA----VQVGFDSGQSKKLNIEYAQL 698 Query: 718 ESV 720 E + Sbjct: 699 EII 701 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 276/686 (40%), Positives = 392/686 (57%), Gaps = 19/686 (2%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + DSLN +QR AV R +L+LAGAGSGKTRVL HRIA+L+ N +PY IMA+TFTN Sbjct: 2 SIYDSLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EMR R+ +++G +WV TFH R+LR ++F I D++DQ L++ Sbjct: 62 KAAKEMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLIR 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACD 182 ++K + +D KQ R + I+S KDEG+ P + + G+ + VY+ YQ Sbjct: 122 EVLKFLQIDTKQTKERVFLSAISSAKDEGISPEEFELSALGDYNKMKISNVYKEYQRRLK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA----- 237 +DF +L+++ EL+ + L +YR RF I+VDE+QDTN IQ+ IRLLA Sbjct: 182 TNNALDFDDLIMKTVELFQSNTEALNYYRNRFRYIMVDEYQDTNTIQFKLIRLLAHSLNE 241 Query: 238 --GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + +VGDDDQSIY +RGA + NI F +FP A I+LEQNYRST NIL+AAN Sbjct: 242 YNEVEHNLCVVGDDDQSIYKFRGANIRNILDFEKEFPDAVVIKLEQNYRSTKNILNAANE 301 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILY 354 +I NN GR K LWTD DGE +S + EA VV+ IKT D G + AILY Sbjct: 302 VIHNNLGRKDKSLWTDNEDGEQVSFCQYDTDFAEATQVVDSIKTLNDQDGISFNNFAILY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSRV EE ++Q S+PY+I G + F++R+EIKD L+YL+ I N D A +R++N P Sbjct: 362 RTNAQSRVFEEKMIQRSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINVP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE--T 472 RGIG TLD V + S ++ + A R L GR+ S + F+ I+ + + + Sbjct: 422 KRGIGLTTLDRVEEFSVKNNMSFYDALRHAENIPGL-GRSTSKITSFVSFIETIKSKLSS 480 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 L + +++ +G E+ E + RI N+ EL+ + E + L Sbjct: 481 DTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNINELINKIVTYEV--EATEPPTLS 538 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EG 589 FL AL A + + V LMTLHSAKGLEFP V++ GME+G+FPS MS++ Sbjct: 539 GFLEEVALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGIFPSYMSINAENPE 598 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 +EEERRL YVG+TRAM+++ L+ A R + G+ ++RPSRFI E+P + ++ Sbjct: 599 LEIEEERRLCYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEIPRYLL-TIQSAQN 657 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQR 675 +P+ + R Sbjct: 658 KGYLAKDSYGESPIRNASPNFSTQSR 683 Score = 70.6 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y +G V+H KFG+G + N+ G + V F QGIK +++++A+LE + Sbjct: 755 YGVGDTVKHIKFGQGVVTNLTKGGRDYEVTVDFGEQGIKKMLSSFAKLEKI 805 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 302/784 (38%), Positives = 403/784 (51%), Gaps = 74/784 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL LND QREAV LLVLAGAGSGKTRV+VHRIA L+ P+ ++AVTFT Sbjct: 10 EDLLQDLNDAQREAVLHDDGPLLVLAGAGSGKTRVIVHRIARLVRDRGVVPWHVLAVTFT 69 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ +L+G +WV TFH R LR A L F I D +DQLRL+ Sbjct: 70 NKAAGEMRERLERLLGPLARELWVQTFHAFGARFLRREAARAGLSPSFAIYDDDDQLRLV 129 Query: 124 KRLIKAMNLDEKQ-WPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 K L+ + LDE + PRQ + I+ K++ LR ++ G +P ++VY Y++A Sbjct: 130 KGLLSELGLDEGEGLTPRQVLSQIDRWKNQALRAAEVKVAGLDPETARAKEVYHRYEQAL 189 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 RAG VDF +LLLR L + + RF +LVDEFQDTN +QY ++LL G Sbjct: 190 ARAGAVDFGDLLLRPVRLLEEDAALRARWAGRFRYLLVDEFQDTNPVQYRLLQLLTGPRR 249 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V +VGDDDQ+IY WRGA V NI F DFPG + ++LEQNYRST IL AA+A+I Sbjct: 250 NVCVVGDDDQAIYRWRGADVSNILGFDGDFPGTKVVKLEQNYRSTRTILDAAHAVISRAR 309 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K+LWT+ G P++L +E EA + + + G + E A+LYR+NAQSR Sbjct: 310 RRREKRLWTESGAGAPLALLVGEDEHAEAERIARAVAAERGRGTSGDEIAVLYRTNAQSR 369 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 LE A+ A +PY I G F+ER E++DA +YLRL + D ERVVN P RGIG + Sbjct: 370 PLEAAMRAARIPYVIVRGTSFYERAEVRDAAAYLRLALSPASDLDLERVVNRPPRGIGGK 429 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ +R + R L L +A E L A AL F L+ LA + + V Sbjct: 430 TVERLRAHAAARGLPLVEAVAERDAVAELKPAARRALAEFHALVTGLAADVPALDAGVAV 489 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY---------NEEDEDLMPLQ 532 V+K SG+ + E+E ++ R ENL ELV A R+F + E+ PL Sbjct: 490 QEVLKRSGMLSRLEEEHTDEAVERAENLAELVAAAREFDESIAGEPPPGDPEEVRPPPLA 549 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM------SL 586 FL AL GE A T + V LMTLH+AKGLEF VF+ GME+G P + S Sbjct: 550 RFLEQIALL-GEADAATPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLPYERPWADQTSS 608 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE----VYHRPSRFIGELPEECV- 641 + L+EERRL YVG+TRA ++LT++ A R YG+ PSRF+ +LP E Sbjct: 609 ERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYRNMEPSRFLRDLPPELFG 668 Query: 642 ----EEVRLRATVS---------------------------------------------- 651 EVR R Sbjct: 669 DAVAREVRAREAAQAAPVARPPTIRRLPGALEGEPHIELDGDDLPQPPAPAPRARAAAPR 728 Query: 652 -RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 P + + G+RV HA GEG ++ + G ++ V F G K + Sbjct: 729 GEPTVDYSFDQRGDAGAAAFSRGERVAHASLGEGVVLACDAGGADAKATVRFASAGDKRV 788 Query: 711 VAAY 714 +A + Sbjct: 789 LARF 792 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 293/774 (37%), Positives = 429/774 (55%), Gaps = 66/774 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LL+ LN QREAV LLVL+GAGSGKTRV+ R+A+L+ V N P+ I+AVTFT Sbjct: 9 SALLEDLNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTFT 68 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ QL+G + V TFH A ++LR L + F I D DQL ++ Sbjct: 69 NKAAREMRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLTRSFVIYDDSDQLNVV 128 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACD 182 KR ++ ++ Q PR+ + I+ +K+ P H+Q + G+ Q +KVY AYQE Sbjct: 129 KRAMREAGIESMQ--PREILHRIDQEKNAARLPEHMQVAPGDERGQLVRKVYAAYQERLR 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA-GDTG 241 A VDF +LLL L+ +P +L++YR RF ++LVDEFQDTN +QYA ++ LA + Sbjct: 187 AANAVDFGDLLLLLVTLFRTRPDVLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPPPSA 246 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 +++VGDDDQSIY WRGA V+NI F +PGA+ ++LEQNYRS NIL AA+ +I N Sbjct: 247 NLVVVGDDDQSIYRWRGADVDNILGFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNT 306 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQS 360 R+ KKLW++ G+ ++L +E E + V +I Q G L+ A+ YR+NAQS Sbjct: 307 RRMEKKLWSERQRGQTLNLMLNRDERAEGQEVARQILALQREGFIKLSSMAVFYRANAQS 366 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEAL A +PY + G F++R E++DA +YLRL+ N DA R++N P RGIGD Sbjct: 367 RVLEEALRLARVPYTLVSGRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPARGIGD 426 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLHV 479 T++ V + R ++L++ + Q AL G A L+ F L+++L A + Sbjct: 427 TTVERVTDFANARGVSLYEVLSQPEQIPALNGAAVKRLKGFRNLLESLTAFAQTNEEAAG 486 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE------------- 526 D++++++ L + E ++ QTR ENL E + A ++F N Sbjct: 487 AVDQMLRETKLVETLQAEGSDESQTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSDVP 546 Query: 527 ----------DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 D+ LQAFL +L GE A+ V LMTLH+AKGLEF VF+ GME Sbjct: 547 PEVDAAPLTADVPALQAFLEQISLV-GEADAEVGDGRVALMTLHAAKGLEFDAVFLTGME 605 Query: 577 EGMFPSQMSLDEG---------------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 E +FP ++ + EERRL YVG TRA ++L ++ A+ R L+ Sbjct: 606 ENVFPHSRAVKSESTFLNEVASADGEPSEEMAEERRLCYVGFTRARKRLFVSLAQCRSLF 665 Query: 622 GKEVYHRPSRFIGELPEECV-EEVRLRATVSRPVSHQRMGTPMVENDSGYKL-------- 672 G+ Y+ PSRF+ ++P + RP+ + D G ++ Sbjct: 666 GELRYNAPSRFLRDVPPALFGISEQEVPEAPRPMVPSTQRRRTWDEDDGPRIDRSYSQAS 725 Query: 673 -----------GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAY 714 G RVRH +FG G +V+ +G+G ++++ V F G G+K ++A + Sbjct: 726 SDMDGVGGDVRGMRVRHEQFGVGRVVSADGNGPNAKVTVEFGGGVGLKRIIARF 779 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 295/721 (40%), Positives = 409/721 (56%), Gaps = 66/721 (9%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L+ LN +QR AV +LVLAGAG+GKTRVL RIA +++ P I+AVTFTNK Sbjct: 41 YLEGLNPEQRLAVETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNK 100 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ RIG L+G + GM W+GTFH + +LLR H A L F ILD++DQ+RLLK Sbjct: 101 AAREMKTRIGVLVGQAIEGMPWLGTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRLLK 160 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--EQTWQKVYQAYQEACD 182 +LI+A LD+K+WP RQ I+ K++GL P I + +Y AYQ+ Sbjct: 161 QLIQAEALDDKRWPARQLAMMIDGWKNKGLGPADIPEGDARAFGNGKGRALYAAYQQRLK 220 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG- 241 DF +LLL ++ P +L+ Y +F ILVDE+QDTN QY W+RLLA G Sbjct: 221 TLNATDFGDLLLHPIRIFREHPDVLREYHAKFKYILVDEYQDTNTAQYMWLRLLAQRPGS 280 Query: 242 ---------------------------------------------KVMIVGDDDQSIYGW 256 + VGDDDQSIYGW Sbjct: 281 PGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNICCVGDDDQSIYGW 340 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDG--AD 314 RGA+V+NI RF DFPGA IRLE+NYRST++IL AA+ LI +N GRLGK L+T+ D Sbjct: 341 RGAEVDNILRFEKDFPGATVIRLERNYRSTAHILGAASHLIAHNEGRLGKTLFTEHSDPD 400 Query: 315 GEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPY 374 + ++ A++ +EAR + I+ Q G AL + AIL R++ Q R E+ + + Y Sbjct: 401 APRVKVHAAWDSEEEARALGEEIEALQAKGHALNDMAILVRASFQMREFEDRFVTLGLSY 460 Query: 375 RIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQ 434 R+ GG RF+ERQEI+DAL+Y R++A DD AFER+VN P RG+G+ + + +R R Sbjct: 461 RVIGGPRFYERQEIRDALAYFRVVAQGADDLAFERIVNVPKRGLGESAVRQIHDVARMRG 520 Query: 435 LTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMY 494 + L QA R+L+ + L + ++L+ +E + + ++++SG M+ Sbjct: 521 VPLLQAARDLVGTEELKPKPRASLRNLVESFERWQGLLDRTRHIELAETILEESGYTDMW 580 Query: 495 EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAV 554 + ++ + R+ENL+EL+ + ++ L+AFL H AL + D DAV Sbjct: 581 KNDRSAEAPGRLENLKELIRSMEEYE---------SLRAFLEHVALVMDA-ERDEELDAV 630 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTL 612 LMTLHSAKGLEF VF+ G EEG+FP Q SLDEGGR LEEERRLAYVGVTRA + L + Sbjct: 631 SLMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGVTRAKKNLHI 690 Query: 613 TYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV---SRPVSHQRMGTPMVENDSG 669 + RR++G PSRF+ ELPE+ VE + RP++ ++ G P S Sbjct: 691 WFTSNRRIHGLWQSTIPSRFLDELPEKHVEVTDDGGSFGGYGRPIADRQPGRPNPYGSSR 750 Query: 670 Y 670 + Sbjct: 751 F 751 Score = 53.3 bits (127), Expect = 4e-05, Method: Composition-based stats. Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Query: 648 ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 + R + + + + + S +K+G RV H KFG G + ++G+ +L V F G Sbjct: 808 SVKGRTIEGELVAKSVSDGPSAFKVGDRVFHLKFGNGNVAAVDGN----KLTVDFDKAGQ 863 Query: 708 KWLVAAY 714 K ++ + Sbjct: 864 KRVLDGF 870 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 273/749 (36%), Positives = 432/749 (57%), Gaps = 51/749 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L+SLN++Q+ AV+ L VLAGAGSGKT+VL RIA+L+ + C I+ VTF Sbjct: 1 MSSYLNSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTF 60 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA+EMR R+ +L+ S W+GTFH + +++LR + L +F I+D+ DQ++ Sbjct: 61 TNKAASEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLDQIK 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEA 180 L+K ++ A N+D K+ PP+Q +YI+ K++ L P ++ KVY+ YQ+ Sbjct: 121 LIKNILSAENIDIKKNPPKQIAFYIDQWKNKALLPEQVKLKNQEFNLVNALKVYKIYQKK 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +L+L + I + Y+ F ILVDEFQDTN +Q W++LL + Sbjct: 181 LLVMNCVDFGDLILHVVTILKKFEDIKKIYQRNFKYILVDEFQDTNYVQNFWLQLLTSEK 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY WRGA+V+NI F N++ +TI+LEQNYRST NIL++A +LI NN Sbjct: 241 KNICVVGDDDQSIYSWRGAEVKNILEFKNNYQNTQTIKLEQNYRSTENILNSATSLISNN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RL K +W++ DGE + + F+ + EA V + I+ L E +IL R+ Q+ Sbjct: 301 EDRLEKNIWSELGDGEKVKIKSYFDGISEATGVSDIIEQNLSKKFKLNEISILVRAAFQT 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R EE ++ +PYRI GG++F+ER EIKDAL YLRLI +DD +FER++N P R IGD Sbjct: 361 REFEERFIKIGLPYRIIGGLKFYERSEIKDALGYLRLINQSSDDISFERIINNPKRSIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++ + +R++ L+L+ A +E+L+E L + L+ F+ + + Q+ D+ Sbjct: 421 SSIKKIHDFAREKDLSLFDASKEILKENILKPKTIQNLKSFLVNMISWKQKCKDIDHISL 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG +M + E+ + R+ENL+EL ++ + +S L FL + +L Sbjct: 481 LEIVLDESGYSSMLKNERTPEADARLENLKELKSSMKNYS---------SLNEFLENISL 531 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRL 598 + + + + + +MT+HSAKGLEF VF+ G EEG+FP Q S+DE G +EEERRL Sbjct: 532 QTAIDE-EWDGEKINIMTIHSAKGLEFDAVFLPGWEEGLFPHQKSIDEKGADGIEEERRL 590 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHR------PSRFIGELPEECVE---------- 642 AYV +TRA ++L +++A R+ YG++ + SRFI E+ ++ + Sbjct: 591 AYVAITRAKKELFISFANQRKFYGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTEDE 650 Query: 643 -----------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 RL+++ + EN + + +G+ V+H FG G Sbjct: 651 FIFDQDFNIEGKKNSPGWNRLKSSFANKNEENIKTISYTENFTDFTVGETVKHEGFGLGK 710 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 I++++G+ +L + F QG K ++ + Sbjct: 711 IIHIDGN----KLLINFNEQGEKKVIDKF 735 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 253/720 (35%), Positives = 417/720 (57%), Gaps = 7/720 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ ++ LN++Q E V + +LVLAGAGSGKTR L++R A+L+ + P++I+ V Sbjct: 8 MNNNFYASQLNERQLEVVTDTENPVLVLAGAGSGKTRSLIYRTAYLIKEKQVHPWNILIV 67 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++ R+ +L+ +WVGTFH + R+LR +F I D + Q Sbjct: 68 TFTNKAARELQERLEKLLNIPVRSLWVGTFHAICCRILRFESAHLPFNANFSIYDEDTQK 127 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ---KVYQAY 177 LLK++ K D++ +P + I+ K++ + P I+ G + + +Y+ Y Sbjct: 128 SLLKKIYKEYGFDKQSFPINNILTRISRYKNKLMLPEDIKFQGEDKDSEFATFLNIYRLY 187 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ +DF ++LL +L LN + + YR +F +++DE+QDTN Q+ + +A Sbjct: 188 QQQLLLNQALDFDDILLWTAKLLLNNNTVREKYRAQFQYVMIDEYQDTNKAQFEIVHQIA 247 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G +V +VGDDDQ+IY +RGA + NI F D+ +IRLEQNYRST NIL+ ANA+I Sbjct: 248 GGHQRVCVVGDDDQAIYSFRGASLRNILEFEKDYNSVHSIRLEQNYRSTGNILALANAVI 307 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN R K+LW++ G+ L NE++EA + + I Q G L E A+LYR+N Sbjct: 308 ANNRRRHSKELWSELPVGDKPVLAVYENEIEEANRITDAILKLQRKGIPLREIAVLYRTN 367 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV E AL+QA +PY I GG++F++R+EIKD L+YL +++N ND+ + R++N P RG Sbjct: 368 AQSRVFESALIQAEIPYSIVGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPARG 427 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG +++ + + +++L+ A + + + L A + F +++ Q + P Sbjct: 428 IGQTSINRLIGFANKTRISLFSAIQNVEAIEELGNPAKKRISEFCLMLERWQQSVSRKPA 487 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS--YNEEDEDLMPLQAFL 535 ++++ L + Y+ + R ENL E VT+ +FS + +E+E + +L Sbjct: 488 LEMVKTIVEELELISHYQNSNDPQDIARAENLVEFVTSVSEFSEHFYQENEREPLIADYL 547 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + AL+ + D+++LMTLH+AKGLEF VFI G+E+ + P +M ++ +EEE Sbjct: 548 PYVALQTDLDRVKENMDSIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQDSIEEE 607 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA L L+Y ++RRLY + PS+F+ E+ +++P Sbjct: 608 RRLFYVGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPPK 667 Query: 656 H-QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 ++ + E+ YK+GQ+V H ++G G I++++G GE +RL ++F + + ++ Y Sbjct: 668 RIKKTNKVITESQKYYKIGQKVFHPEYGLGVILSVDGEGEDARLTISFGNR-LAKIIGRY 726 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 271/789 (34%), Positives = 412/789 (52%), Gaps = 78/789 (9%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-------------- 48 ++ ND Q++AV +L++AGAGSGKT VL +RIA ++ Sbjct: 11 LNKYFSRTNDMQKKAVFRINGAVLIVAGAGSGKTTVLCNRIANMLLFGNAYNSNTVRELS 70 Query: 49 -----------------------------VENCSPYSIMAVTFTNKAAAEMRHRIGQLMG 79 + P++I+AVTFTNKAAAE++ R+ + G Sbjct: 71 DDDVAFAQSFLAGEIDNFDAAERLSEIFGEDRVKPWNILAVTFTNKAAAELKERLENM-G 129 Query: 80 TSQGGMWVGTFHGLAHRLLRAHHMDAN--LPQDFQILDSEDQLRLLKRLIKAMNLDEKQW 137 G+W TFH R+LR + +F I D++DQL+++K ++K N+ +K Sbjct: 130 ADVDGIWAATFHSACVRILRQDIEELGMGYKSNFTIYDTDDQLKVIKTVMKEHNISDKAV 189 Query: 138 PPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-----KVYQAYQEACDRAGLVDFAEL 192 P+ I+ KD+ + P + G +Q +Y YQ + A +DF ++ Sbjct: 190 TPKAVQNLISRSKDKLITPDKFSTKGKNGSDDYQLSTAKTIYTDYQARLEAANALDFDDI 249 Query: 193 LLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQS 252 ++ +L+ + P +L H++ RF I+VDE+QDTN QY + LLA +G + +VGD+DQS Sbjct: 250 IMLTVKLFAHCPDVLSHWQNRFRYIMVDEYQDTNAAQYKLVSLLAEGSGNLCVVGDEDQS 309 Query: 253 IYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDG 312 IY +RGA +ENI F F GAE I+LEQNYRST+ IL AANA+I NN K LW+D Sbjct: 310 IYRFRGATIENILSFEEQF-GAEVIKLEQNYRSTATILKAANAVIANNTQHKDKNLWSDL 368 Query: 313 ADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASM 372 DG+ I + E +EA F+ RI G A+ ILYR+NAQSR +E L ++ + Sbjct: 369 GDGDKIRMDRFSTEQEEAMFITERILDGVKQGKKYADHVILYRNNAQSRTVETTLAKSGI 428 Query: 373 PYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRD 432 PY+I GG+RF+ER+EIKD ++YL ++ N D+ F R+VN P RGIG TLD + + Sbjct: 429 PYKIIGGVRFYERKEIKDIIAYLCVLNNNYDEVRFGRIVNEPVRGIGAATLDELNRVVSG 488 Query: 433 RQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRT 492 ++ QA E +L+ R A L E L+Q T D+ D ++ G R Sbjct: 489 MGISYVQAMCESDSLPSLS-RKAKVLVPLGETFSELSQHTDDISDGSLIDDILDRFGYRE 547 Query: 493 MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQD 552 +++ G +G+ R+EN+ EL + F+ E L FL AL + + D Sbjct: 548 AMQRQ-GLEGEVRLENINELKSNMITFAKENEG---AGLSEFLEQVALVSDMDSFEADDD 603 Query: 553 AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTL 612 LMT+HSAKGLEF VF+VG EE +FP S + +EEERRLAYV +TRA + L Sbjct: 604 KAVLMTMHSAKGLEFDTVFVVGAEENIFPGYRSQFDPMEIEEERRLAYVAITRAKRHLYF 663 Query: 613 TYAETRRLYGKEVYHRPSRFIGELPEECV-----------------EEVRLRATV----S 651 T A+ R LYG+ + ++ SRF+ E+P + + E+++ R + Sbjct: 664 TCAKQRMLYGQTMRNKVSRFVVEIPSQYMAYDDHTAVTASAAARSAEQMKPRTSYLQQQQ 723 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R ++ + Y G+RV H FG+GT+++ + G L++AF +G K + Sbjct: 724 RSYHAEQREMEKRVENVSYAPGERVHHGVFGDGTVLSAKAMGGDWLLEIAFDDKGTKKVA 783 Query: 712 AAYARLESV 720 A +A++ + Sbjct: 784 AKFAKMTKI 792 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 258/653 (39%), Positives = 383/653 (58%), Gaps = 14/653 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +Q AV LLVLAGAGSGKT V+ +RIA L+ + +I+AVTFTNKA Sbjct: 4 LSTLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ L+G G+ + TFH L R+LR + ++F I + DQ+ L+K+ Sbjct: 64 AKEMRERVDSLVGRQACKGIIISTFHSLGVRILRRNIELLGYKRNFSIYSTSDQIGLVKQ 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRA 184 +++ +N+D K++ +W I++ K++ + P +G+ E +VY YQ A Sbjct: 124 IMREVNIDGKKYDADSIIWKISAAKNKLIPPDRFTPRFGDEYELMAAEVYPRYQSALKAF 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF ++++ +L N P +LQH++ERF ++VDE+QDTN QY + LLAG G + Sbjct: 184 NAIDFDDIIMLTADLLQNHPEVLQHWQERFRYVMVDEYQDTNASQYLLVNLLAGGYGNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA V NI F DF ++LEQNYRST NIL AAN +I +N R Sbjct: 244 VVGDDDQSIYGWRGADVGNILDFEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVL 363 K+LWT G P+ L ++ +EA VV R++ + A ++ AILYR+NAQSR Sbjct: 304 EKRLWTASGSGRPLDLIVMQDDEEEATTVVERMQMERFKHNLAYSDFAILYRTNAQSRPF 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE L +PY + GGM+F+ER+E+KDA+SYL++I N ND+ A R+VN P RGIGD T+ Sbjct: 364 EEQLRFEDIPYVLIGGMQFYERKEVKDAISYLKVIGNSNDEIALLRIVNFPRRGIGDSTV 423 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHVQTD 482 + Q S ++ L +A + + + + + +Q F L+ +E + + L + Sbjct: 424 VKINQWSMEQGCPLLEAFGRVNEIEGIVEATRNRVQDFYRLLQGAVEEFSGEGDLAEKGR 483 Query: 483 RVIKDSGLRTMYEQEKGEKGQTR--IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 R+ K GL + + R +EN+E+++ + + EE L FL +L Sbjct: 484 RLFKQLGLEDELYRTIDDPALARRKVENVEQIINSMAAY---EERIPKPTLSGFLEKVSL 540 Query: 541 E-----AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +G+ + + +DAV LM+LHS+KGLEFP VF+VGMEE + P + S+ E ++EE Sbjct: 541 MDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRSIYEDFTVDEE 600 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 RRL YVG+TRA + L +T R+ YGK PSRF+ E+P + E + A Sbjct: 601 RRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEIPGHLLNEQKGAA 653 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 280/721 (38%), Positives = 390/721 (54%), Gaps = 37/721 (5%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL LN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFT Sbjct: 3 DALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ L+ G +WV TFH A R+LR + L F + D +DQ LL Sbjct: 63 NKAAEEMRERLRGLVP-GAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTALL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQ 178 K ++K + L + P + + + K+ G+ + + Y V YQ Sbjct: 122 KEVLKELALSARPGPIKALL---DRAKNRGVGLKALLGELPEYYAGLSRGRLGDVLVRYQ 178 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 EA G +DF ++LL A L +L+ R+R I VDE+QDT+ +QY + RLLAG Sbjct: 179 EALKAQGALDFGDILLYALRLLEEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAG 238 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +M VGD DQ IY +R A ++NI F D+P A RLE+NYRST IL ANA+I Sbjct: 239 EEANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRFANAVIV 298 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N RL K L GEP+ LY A + +EARFV I G A+LYR+NA Sbjct: 299 KNALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARL---GPPWDRYAVLYRTNA 355 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGI Sbjct: 356 QSRLLEQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T V+ ++++ L W+A +E A L+ F+ L++ L Q+ P Sbjct: 416 GPATWARVQLLAQEKGLPPWEALKEA----ARTFPRPEPLRHFVALVEEL-QDLVFGPAE 470 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +++ + + E + R+EN+EEL+ A ++ LQ FL Sbjct: 471 AFFRHLLEATDYPAYLREAYPEDAEDRLENVEELLRAAKEAE---------DLQDFLDRV 521 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + S+ LEEERRL Sbjct: 522 ALTAKAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRNSVSTLEGLEEERRL 581 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YVG+TRA ++L L++AE R +YG+ RPSRF+ E+ E E V P Sbjct: 582 FYVGITRAQERLYLSHAEEREVYGRREPARPSRFLEEVEEGLYE-------VYDPYRRPP 634 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 P ++ G+RV H +FG GT+V +G + V F+G G+K L YA L+ Sbjct: 635 SPPPHRPRPGAFRGGERVVHPRFGPGTVVAAQGD----EVTVHFEGFGLKRLSLKYAELK 690 Query: 719 S 719 Sbjct: 691 P 691 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 277/714 (38%), Positives = 401/714 (56%), Gaps = 13/714 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + D LN Q EAV LLVLAGAG+GKTRV+ +RIA L++ +I+AVTF Sbjct: 1 MPDYKDELNKAQYEAVTTTEGPLLVLAGAGTGKTRVITYRIAHLINNMRVPSRNILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ RI +L+ +W+GTFH + RLLR A L F ILD +D+L Sbjct: 61 TNKAAGEMKERILKLVDYEDADIWIGTFHSICLRLLRRDPEKAGLEPGFGILDQDDRLAT 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 ++ +IK +N+D K++PP++ M I++ K+ RP+ + + V+ AYQ+ Sbjct: 121 IRDIIKNLNIDHKKYPPKKYMNTISTYKNT--RPYVDGKKPEELLHMFADVFAAYQQRLK 178 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 LVDF ++L ++ N P + +Y+E F ILVDE+QDTN+IQ+ ++ LLAG G Sbjct: 179 DQKLVDFDDMLALTIRMFKNHPDTVGYYKELFRYILVDEYQDTNDIQFLFLHLLAGLDGN 238 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIYGWRGA + NI F F G + IRL +NYRS IL AAN LI NN Sbjct: 239 LCVVGDDDQSIYGWRGADIRNILEFDTIFKGTKIIRLLENYRSRPQILQAANKLIRNNKL 298 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R GK L +G + + E DEA FV++++ + + G +E AILYR+N QSR Sbjct: 299 RKGKDLVAARDEGGLVQVLPVSRETDEAEFVIDQVNKYLEEGVKGSEIAILYRTNGQSRN 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 E L + + Y++ G + F++R+EIKD LSYLRL N D +F R V P RGIGD T Sbjct: 359 FEVLLNRQGVAYKVIGSVGFYQRREIKDILSYLRLFDNPYDSVSFRRSVKAPPRGIGDTT 418 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ + + +++ +A + + L G + + ++++ + LA + Sbjct: 419 INKITDYASGNGISILEAVYAMNDQ--LRGAQKESFRGYLKIFNELAACLKVSEMVKTVM 476 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + SG YE E ++ + RI N+EEL A F + D + FL+ A+ Sbjct: 477 DMTDYSGYVKRYEDE--QEAERRISNIEELYNAAVSFENSNSD---AMITDFLAATAIAT 531 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 + VQLMT+HSAKGLEF VF+ G+E G+FP SL+E LEEERRL YVG Sbjct: 532 SSD--EPADSCVQLMTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEERRLCYVG 589 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 VTRA Q L +TYA TR +YGK + S F+ E+ V R R+ + P + + Sbjct: 590 VTRAKQNLHMTYASTRMVYGKYMPQSRSVFLDEMG--IVGFSRSRSDMPLPKASRPTYQK 647 Query: 663 MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 V +G K G +V H KFGEG +V + G+G+ + V F+ G+K + + + Sbjct: 648 KVVEVNGIKNGSKVSHDKFGEGMVVAISGTGDSANADVFFKTSGLKKIRVTFLK 701 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 288/689 (41%), Positives = 402/689 (58%), Gaps = 62/689 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I++VTFTNK Sbjct: 34 YLSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTFTNK 93 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+GQ++G + GM W+GTFH + R+LR H L +F +LD++DQ+RLLK Sbjct: 94 AAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQIRLLK 153 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACD 182 +L+ A N+D+K+WP R I+ K+ GL P + + K+Y YQE Sbjct: 154 QLLAADNIDDKRWPARMLAGLIDGWKNRGLTPSQVPAGEAAMFGNGRGGKLYAQYQERLK 213 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---- 238 DF +LLL L+ P +L+ Y+ RF ILVDE+QDTN QY W+RLL+ Sbjct: 214 ILNAADFGDLLLENIRLFREHPDVLRSYQNRFKFILVDEYQDTNVAQYMWLRLLSQTPSS 273 Query: 239 -------------------------------------------DTGKVMIVGDDDQSIYG 255 + VGDDDQSIYG Sbjct: 274 SSLPGSTRQSISSQEDGSPGLAASRRPGDDVETSGNVVASTSAPPKNICCVGDDDQSIYG 333 Query: 256 WRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG 315 WRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI +N GRLGK L T+ DG Sbjct: 334 WRGAEVDNILRFDHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDG 393 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYR 375 E +++ A++ +EAR + I+ Q G AL E AIL R++ Q R E+ + +PYR Sbjct: 394 EMVTVTGAWDSEEEARAIGEEIEQLQRQGHALNEIAILVRASFQMREFEDRFVTLGLPYR 453 Query: 376 IYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQL 435 + GG RF+ER EI+DAL+YLR+I + DD AFER+VN P RG+GD T+ ++ +R R++ Sbjct: 454 VIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNVPKRGLGDATVQMLHDHARKRRI 513 Query: 436 TLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYE 495 L++A R ++ L +A S+L+ +E + + + + V+ +SG M++ Sbjct: 514 PLFEAARMVIDTDELKPKARSSLRGLIENFERWQVQRDALAHTELAEIVLDESGYTEMWQ 573 Query: 496 QEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQ 555 +++ R+ENL+ELV + +F LQ FL H +L + +DAV Sbjct: 574 KDRSADAAGRLENLKELVRSMEEFEN---------LQGFLEHISLVMDR-EGGADEDAVS 623 Query: 556 LMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTLT 613 +MTLHSAKGLEF VF+ G EEG+FP Q +LDE GR LEEERRLA+VG+TRA ++ L Sbjct: 624 VMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEQGRAGLEEERRLAHVGITRARKRAKLY 683 Query: 614 YAETRRLYGKEVYHRPSRFIGELPEECVE 642 +A RR++G PSRF+ ELP VE Sbjct: 684 FATNRRIHGTWNTTIPSRFLDELPAANVE 712 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 +S + L RV H KFG G + ++G+ +L + F G K +V ++ Sbjct: 796 KSTGTESAFSLKDRVFHQKFGYGHVTKIDGN----KLTIVFDKAGEKKVVDSF 844 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 767 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 273/750 (36%), Positives = 396/750 (52%), Gaps = 41/750 (5%) Query: 1 MDVSY-LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M + LL LN +Q E V LL+ AGAGSGKT+VL HRIA ++ S I+A Sbjct: 1 MTIPADLLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +TFTNKAA+EMRHR G L+G S M + TFH + R+LR ++F I D+ DQ Sbjct: 61 ITFTNKAASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH--------------HIQSYGNP 165 ++K++ ++ D I K++ P + S Sbjct: 121 RAIIKQICQST--DTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNSTNGNSVTSITLQ 178 Query: 166 VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDT 225 EQ V++ YQE A DF +L+ L P I YR R+ +LVDE+QDT Sbjct: 179 REQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNRWKYLLVDEYQDT 238 Query: 226 NNIQYAWIRLLAGDTGK---VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQN 282 N+ QY I L + VGD DQSIY +RGA + NI F NDFP TI LEQN Sbjct: 239 NHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNFENDFPDCHTILLEQN 298 Query: 283 YRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD 342 YRS NIL AANALI NN R K LW++ GE + YCA + +E RFV +R++ D Sbjct: 299 YRSCQNILLAANALISNNQNRKDKNLWSELGAGEKVIAYCASSAEEEGRFVADRVRHLVD 358 Query: 343 NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN 402 G +L++ A+ YRSN QSRV+EE+L++ S+PYR+ GG +F+ER EIKD L+YL +I N + Sbjct: 359 QGESLSDIAVFYRSNTQSRVIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPD 418 Query: 403 DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM 462 D A R++N P RG+G + + + + + R +TL QA + + + A SAL+ Sbjct: 419 DTLALRRILNVPKRGVGTVSENRLVEFASARGITLMQALSRIDEI-NIQPSAKSALRDLF 477 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 L++ A + MP + D ++K + L + + + + R N+ + V + F+ Sbjct: 478 YLLNRFA--GSSMPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFVDSVEDFAKE 535 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS 582 L F+++ AL Q+D + LMTLH AKGLEF VF+ G+EEG+ P Sbjct: 536 NPGG---TLSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPH 592 Query: 583 QMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 +MSL E +EEERRLAYVG+TRA + L L+++ R+ Y V PSRF E+P+ + Sbjct: 593 EMSLKEKNGIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGV-RLPSRFWDEIPQHLLR 651 Query: 643 E------VRLRATVS----RPVSHQRMGTPMVEN---DSGYKLGQRVRHAKFGEGTIVNM 689 R + RP R +++N + + V+H+ FG GT+V++ Sbjct: 652 WHSRFTHKRFTGPLYGFTARPAGESRQSVHVLKNRYPRESFSISDSVKHSVFGVGTVVDV 711 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 G G + V F + + L+A+ A + Sbjct: 712 LGLGPKQIIVVEFADK-RRSLLASIAPIVK 740 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 284/830 (34%), Positives = 405/830 (48%), Gaps = 113/830 (13%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + LL LN +QREAVA S LL++AGAGSGKT VL RIA+ ++ P ++A+TFT Sbjct: 20 AELLTGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFT 79 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM R+ ++G + MWV TFH R+LR + +F I DS+D RL+ Sbjct: 80 NKAAKEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLV 139 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACD 182 +++K + +D K++ PR + I++ K++ P I NP ++ V++ Y Sbjct: 140 SQILKELGIDTKKYTPRSMLHRISNLKNDLQTPDDFIPRANNPADEVLADVFKRYTSRLR 199 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG- 241 A DF +L+ L+ P + YR RF +ILVDE+QDTN QYA I+ LAGD Sbjct: 200 LANAFDFDDLISETVHLFGAFPEVADFYRRRFRHILVDEYQDTNPAQYALIKALAGDGAG 259 Query: 242 -----KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 ++ +VGD DQSIY +RGA V NI F DFP AETI LEQNYRST NIL AANA+ Sbjct: 260 GATGAELTVVGDSDQSIYAFRGATVRNIMEFEKDFPNAETILLEQNYRSTQNILDAANAV 319 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYR 355 I NN R KKLWT GE I + A NE EARF+V+R+ DN + A+ YR Sbjct: 320 ISNNQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIVDRVDELIDNEKYTYGDFAVFYR 379 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +NAQSR +E+AL+++ +PY++ GG RF+ER+EIKDAL+YLR++AN +DD R++N P Sbjct: 380 TNAQSRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLRVVANPDDDVNLRRILNVPK 439 Query: 416 R-------GIGDRTLDV-----------------VRQTSRDRQLTLWQACRELLQ--EKA 449 R GI D + ++ + R+L E A Sbjct: 440 RSIGDRTEGIVADFADREGISFYTALGRLDEIVHLSARAKTSVAKFYDLMRDLAATAEAA 499 Query: 450 LAGRAASALQRFMELIDALAQET--ADMPLHVQTDRVIK--------------------- 486 R A+ +++L + T D ++ Sbjct: 500 PLSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAEDFVATRALADATDDEDAD 559 Query: 487 -------DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++G T ++ + ++ ++ + ++AFL A Sbjct: 560 DADAEAAETGSSTAVDEGSSAEDGDAGDSTDDAGADAADEGRDAPSAGGSSIEAFLEQVA 619 Query: 540 LEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L + Q D V LMTLH+AKGLEFP VF+ G+E+G FP S + L EERRL Sbjct: 620 LASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGGFPHARSFENPSELSEERRL 679 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------------- 645 AYVG+TRA Q+L +T AETR ++G+ Y+ PSRF+ E+PE +E Sbjct: 680 AYVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPESLIEWENTGTFSSSMGGGFT 739 Query: 646 -----------------------------------LRATVSRPVSHQRMGTPMVENDSGY 670 A S PV+ Sbjct: 740 SGGYGGGSLGGGYASSRSGGFGSSRGSSRSSGSRSGSANSSSPVAGFPNRIRPNREVITV 799 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G++V H FG GT+ + G G+ + V F G K L+ YA +E + Sbjct: 800 SVGEKVSHESFGLGTVTEVNGVGDKTVAVVDFGSLGTKRLLLRYAPIEKL 849 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 287/798 (35%), Positives = 412/798 (51%), Gaps = 90/798 (11%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L LN +QREAV LL+LAGAGSGKTRV+ HRIA +++ + P +++AV Sbjct: 1 MD---FLKGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAV 57 Query: 61 TFTNKAAAEMRHRIGQLMG--TSQGGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQI 113 TFTNKAA EMR R+ L+ V TFH RLLR + F I Sbjct: 58 TFTNKAAKEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRPGFTRRFTI 117 Query: 114 LDSEDQLRLLKRLIKAMNLDEKQW-PPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQ 171 D EDQL+++K + + DEK++ R A+ I+ K+ + P + N + Sbjct: 118 YDDEDQLQIIKAAYRTLGFDEKEFMQYRAALSRISHAKNTKVTPQEMFRDAVNKESEAVA 177 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 +Y+ Y++A A +DF +LLL A L + + R + +++DE+QDTN QY Sbjct: 178 ALYEEYEKALRNANALDFDDLLLEAVRLLRTDDATRESWNRRLSYVMIDEYQDTNRSQYE 237 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 +RLL V +VGD+DQSIY WRGA ++NI F D+P A+TIRLEQNYRST NIL+ Sbjct: 238 LMRLLTEQHQNVCVVGDEDQSIYSWRGADIKNILDFEKDYPRAKTIRLEQNYRSTKNILA 297 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE-C 350 AA A++ENN R GKKLWT+ GE + LY ++ +EA F+ + + + + + Sbjct: 298 AAGAVVENNKARKGKKLWTESDSGELLGLYAGYDSENEALFIADTTEKYLAS--NPGDHV 355 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+N+QSR +EEAL + Y + GG F++R EIKD ++YL+L ++ D + RV Sbjct: 356 AILYRTNSQSRQIEEALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRV 415 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 +NTP RGIG T++ + + RD L LW++ ++ ++ L+ R+ S+L F LI L+ Sbjct: 416 INTPARGIGRTTVEQIERYGRDHGLNLWESIERIIDDQQLSTRSQSSLVVFRNLIQELSL 475 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + L +++ +G R M +QEK + +TR+ENL+EL+ A E Sbjct: 476 VASTSSLPDLIRHILERTGYRKMLQQEKTPESETRLENLDELINAAADAHERGE-----T 530 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L FL +AAL A D Q V LMTLH+AKGLEFP VF+ GME G+FP S++ Sbjct: 531 LGDFLDNAALVADVDSYDE-QSPVTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEE 589 Query: 591 RLEEERRLAYVGVTRAMQKLTLTY------------------------------------ 614 LEEERRL YVG+TRA +KL LT+ Sbjct: 590 ALEEERRLCYVGMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENLIFNLGPRD 649 Query: 615 ----------------AETRRLYGKEVYHR---PSRFIGE--LP------------EECV 641 + R Y + Y+ S+F GE LP + Sbjct: 650 EPGEVDLYSERYDVRQSARRNTYTGKTYNSLDNISQFFGERGLPFKPGQSAPAPPKPDLR 709 Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 + + + P G + G V H K+G GT+V EG G+ +++ V Sbjct: 710 TPPQYPRPIGSAPMPMKQVPPPPPPRKGARAGMTVEHPKYGTGTVVRREGEGDDAKITVN 769 Query: 702 FQGQGIKWLVAAYARLES 719 F G+K LV YA L+ Sbjct: 770 FPRYGLKKLVEKYAGLKR 787 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 765 bits (1977), Expect = 0.0, Method: Composition-based stats. Identities = 277/724 (38%), Positives = 403/724 (55%), Gaps = 18/724 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL+ LN QREAV+AP +LVLAGAGSGKTRVL R+AWL++ P SI+A+TF Sbjct: 2 LEELLEDLNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAA-GERPSSILAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM R+ L+G + G+WV TFH R+LR H L + I D +D RL Sbjct: 61 TNKAAGEMAERVRSLVGPNADGLWVSTFHAACARMLRLHPELGGLRSGWSIYDQDDARRL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEAC 181 L+R I+ ++LD K++PPR ++ K + P E+ VY++YQ A Sbjct: 121 LERTIRRLDLDTKRFPPRAIAQQVSLAKARLVDPERFTDEAEGLYERQVAMVYRSYQAAL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 A DF +L+ E +P + +H+R RF ++L+DE+QD N Q+A++ L G +G Sbjct: 181 AEANAADFDDLIGLVVEGLATRPELAEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSG 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V VGD DQSIY +RGA + F F GA+ + LEQNYRST+ IL ANA+I N Sbjct: 241 SVFAVGDVDQSIYAFRGADPSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNR 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNAQS 360 R K L+++ +G P Y A +E DEAR+V ++ Q G +E A+++R+NAQS Sbjct: 301 RRYAKHLFSELGEGTPARRYQATDERDEARWVAATVREFLQRGGVDPSEIAVIFRTNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEA +A +P+R+ GG+RF+ER+E++D L+YLR++AN +DD A R++N P RGIG Sbjct: 361 RPLEEAFSEAGIPFRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVPRRGIGR 420 Query: 421 RTLDVVRQTSRDRQLTLWQACR-ELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T + ++ + R ++ R E ++ L R AL+ F+ELID L + Sbjct: 421 GTEEALQAAAALRGRSMLSLLRAEGVEVLGLTSRQERALRGFVELIDRLGALASLHRPSE 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 D V+ ++ +E + R+EN+ EL + + L++FL AA Sbjct: 481 LIDAVVAETSYLEHLNEEDPITLEGRLENIAELRASAAE---------ADDLESFLERAA 531 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + + V L+T H+AKGLEF V +VG+EEG+FP ++ + +EEERRL Sbjct: 532 LVSAVDEV-MGASGVTLLTAHAAKGLEFDVVVVVGLEEGVFPHVRAIVDAEAVEEERRLF 590 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA L LT A R +G+ +Y+ PSRF+ ELP + V V + Sbjct: 591 YVAMTRARTTLVLTSARRRASWGEPLYNPPSRFLDELPADLVATTAAPVAVGTACAESIQ 650 Query: 660 GTPMVEN----DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 V S + +G RV HA++GEGTI + G L +AF G G + A+ Sbjct: 651 RASAVVEARAARSEWVVGDRVFHARYGEGTIRRVVPRGVDDELVIAFHGAGERRFFASMV 710 Query: 716 RLES 719 +L Sbjct: 711 KLRR 714 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 249/663 (37%), Positives = 380/663 (57%), Gaps = 12/663 (1%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 D LN+ QR+AV L++AGAGSGKTRVL +++A+L+ P+ I+A+TFTNKAA Sbjct: 4 DFLNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQN-GYQPWEILALTFTNKAA 62 Query: 68 AEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EMR RI QL+ + M W GTFH + R+LR H LP F I D+ D L+K + Sbjct: 63 REMRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYDAADAKSLVKSI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQAYQE 179 I+ + LD+K + P I+ K+ + P + + + + ++Y Y E Sbjct: 123 IRELKLDDKIYRPGTVAARISDAKNHLMLPDEYAADVDRMNRDKRDGLTELVRIYNIYIE 182 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C +A +DF +LLLR + L+ ++P I + Y +F +LVDE+QDTN +QY IR L Sbjct: 183 RCRQANALDFDDLLLRTYLLFHDRPDICEKYVRKFRYVLVDEYQDTNAVQYRIIRYLCPG 242 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 ++ +VGDD QSIY +RGA + NI F +P A+ I+LE+NYRST NI+ AAN++I Sbjct: 243 EARLCVVGDDAQSIYAFRGADIGNILNFQTHYPSAKLIKLERNYRSTENIVQAANSIISR 302 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 N R+ K ++++ G+ + + A+ + DE+ VV I K + + +L + AILYR+NA Sbjct: 303 NKNRIPKTIYSENGAGDKVCIISAYTDKDESAKVVKEIFKLRRQHHISLDQVAILYRTNA 362 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR E+AL A++PYR+YGG+ F++R+EIKD ++Y R++ N D+ A R+VN PTRGI Sbjct: 363 QSRAFEDALRNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCNPQDEEALLRIVNYPTRGI 422 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETADMPL 477 G T+ + +R LW + AL R L F ELI + M + Sbjct: 423 GQTTMSKLIAAARGNGEPLWSVLLAPDKFGVALNRRTLEKLYAFAELIRSFQARADVMGV 482 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + +++ SG+ + ++ +G ++ EN++EL+ + + F +E++ ++ L +L Sbjct: 483 YDLVSELLEASGITQELQGDRTPEGLSKWENIQELLNSIKGFE-SEQETGVVLLADYLPQ 541 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + Q D + V LMT+H+AKGLEF VF+ G+E+G+FP + LEEERR Sbjct: 542 VVLLTDQDQQDDDEPKVTLMTVHAAKGLEFEAVFVTGLEDGLFPGTAAKYSARELEEERR 601 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YV VTRA +TYA+TR +YG+ + PS F+ E+ + VE A H Sbjct: 602 LFYVAVTRAKAHCFITYAKTRYIYGRLEFCEPSLFLQEIDPQYVETDSSSARDFSSFGHL 661 Query: 658 RMG 660 G Sbjct: 662 NNG 664 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 272/659 (41%), Positives = 382/659 (57%), Gaps = 16/659 (2%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN QR+AV L+VLAGAG+GKTRVLV+RIA ++ P I+AVTFTNKAA Sbjct: 5 AQLNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVD-RGVPPRDILAVTFTNKAA 63 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ +L+G + MW+GTFH +LLR H L +DF I DS+DQ RLL LI Sbjct: 64 KEMRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDFTIFDSDDQKRLLNALI 123 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 K L E Q + I+ K P + +G + +++Y YQ + G V Sbjct: 124 KEHGL-EDQVSAKTLAVQIDRCKSRDEDP--MDRHGGWGDDLLREIYPLYQAGMAQQGAV 180 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LLL+ EL P + RF ++LVDEFQDTN +Q+ +R A + + +VG Sbjct: 181 DFNDLLLKVLELAR-DPTVGPVLSARFDHVLVDEFQDTNRVQFRLVRHFADVSRNLTVVG 239 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA+ N+ F D+P AE ++LEQNYRSTS IL AANA+I N R K Sbjct: 240 DDDQSIYSWRGAEPRNLLEFKRDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKA 299 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEA 366 LWT GE I ++ +EA F+ I+ ++ AILYR+ AQSR LEE Sbjct: 300 LWTASDGGESILWEPCPSDREEATFIARAIRGLVSAENRDFSDMAILYRTRAQSRQLEEQ 359 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + + Y I G + FF+R+E+KD +SYLRL+ N D AFER+VN P RGIG T++ V Sbjct: 360 LRRFDIHYEIIGDVSFFQRREVKDIISYLRLLVQPNADLAFERIVNVPARGIGKTTVERV 419 Query: 427 RQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQ-ETADMPLHVQTDR 483 R +R +L L++A R LA RA + L+ F++++D L A + + Sbjct: 420 RDYARRAELPLFEAARACADGSGGSLAARARNKLRAFLDIVDGLRDVMAAGASVAEIVIQ 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ SG +E + + R++NL ELV+ F +EE+ + L FL++ AL++ Sbjct: 480 TVERSGYSAALTKEGTLEAEERLKNLSELVSWGSSF--DEEEGEDASLVEFLANVALQSS 537 Query: 544 EGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLEEERRLA 599 +A++ V++MT+H+AKGLEFP VF+ G+EEG+FPS D +G LEEE RLA Sbjct: 538 GDKAESGDRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPSLRERDDQNDGDTLEEEYRLA 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV +TRA ++L LTYA R ++G+ RPSRF+ +P++C+ VR +H Sbjct: 598 YVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCL-AVRAEPPPPATTTHYD 655 Score = 49.0 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 23/47 (48%) Query: 668 SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 + G V HA FG G ++ G G+ +L + F G+K ++ + Sbjct: 736 GEIRAGSLVTHATFGRGRVIEARGRGQTRKLLIDFSEVGLKTVLERF 782 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 280/804 (34%), Positives = 416/804 (51%), Gaps = 90/804 (11%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + LD LN++Q AV LLV+AGAGSGKTR L HRIA L++ P I+AVTFT Sbjct: 6 NSFLDGLNNEQSNAVNHFEGPLLVVAGAGSGKTRALTHRIAHLITEYKVDPSEILAVTFT 65 Query: 64 NKAAAEMRHRIGQLMGTSQG-----------------------------GMWVGTFHGLA 94 NKAA EM+ R+ L+ +W+GTFH L Sbjct: 66 NKAAREMKERLELLLAKRIAKYQLDQPWSSVSLVEQNQFRTRIYREVTKDLWIGTFHALF 125 Query: 95 HRLLRAHHMD------ANLPQDFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYIN 147 +LLR + F I D D L+K +I + MNLD K++ P++ W I+ Sbjct: 126 SKLLRFDIEKFVDKEGLKWTKYFSIYDETDAQSLIKEIIIQDMNLDPKRFEPKKVRWAIS 185 Query: 148 SQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHI 206 + K++G+ P QS + +VY Y++A +DF +LLL +L + Sbjct: 186 NAKNQGILPDQFTQSAEGQRGKLIAQVYSLYRKALAANNALDFDDLLLLPVQLLKQNEQV 245 Query: 207 LQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK-----------VMIVGDDDQSIYG 255 ++ RF ++LVDE+QDTN QY I+LL + V +VGD DQSIY Sbjct: 246 RSYWHNRFKHLLVDEYQDTNWTQYELIKLLVTNGINPSFFSSWSKRSVFVVGDADQSIYS 305 Query: 256 WRGAQVENIQRFLNDFPG-------AETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 +R A + F DF + ++LE+NYRSTS IL AAN+LI NN RL K L Sbjct: 306 FRAADFRILMGFQEDFKNKNSLQGLSNVVKLEENYRSTSTILDAANSLISNNKERLDKVL 365 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQSRVLEEA 366 +GE I L +E+ EA VV+R++ + + AILYR+NAQSRV+EE+ Sbjct: 366 KATRGEGELIKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAILYRTNAQSRVIEES 425 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L++ ++PY + GG+RF++R+E+KD L+YLRL+ N +D + R++N P RGIG T+ Sbjct: 426 LVRWNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNVPKRGIGKTTVQRF 485 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 S + LW+ + ++L GR+A L +F ELID L + V++ Sbjct: 486 SDASSQLGIPLWEVVSDPEAIRSLGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVME 545 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 SG + ++ + R NL+ELV A+ Q+ +E+ + L+ FL+ AAL + + Sbjct: 546 KSGYISELIATATDEAEERRRNLQELVNASLQY---QEENEAADLEGFLATAALASDADK 602 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRA 606 DT D + LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TRA Sbjct: 603 KDTAHDRITLMTLHSSKGLEFPIVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGLTRA 662 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSR-FIGELPEECVE-------------EVRLRATVSR 652 ++L L +A RR++G S F+ E+P E +E E R+ Sbjct: 663 KERLFLFHATERRIWGGMREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERRMDRLTRV 722 Query: 653 PVSHQRMGTPMVEND----------------SGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 ++ + + + +++G +V H+ FGEG + ++ GSGE Sbjct: 723 DRREDQLNSSGISKNLPTNAVRRKYSGPAPGVSWEVGNKVLHSAFGEGEVTHIFGSGEKI 782 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 + + F G G K L A ++ + Sbjct: 783 SIAIKFVGMGPKILDPRLAPIQPI 806 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 254/648 (39%), Positives = 389/648 (60%), Gaps = 14/648 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ + LN +Q EA LL+LAGAGSGKTRVL HRIA+L+ + SPY I+A+ Sbjct: 1 MELKNI---LNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ QL+ QG +WV TFH + R+LR + DF I D++DQ Sbjct: 58 TFTNKAAQEMRDRVNQLLPERQGEIWVSTFHSMCLRILRREIGNLGYDSDFSIYDTDDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEG--LRPHHIQSYGNPVEQTWQKVYQAYQ 178 +++++ K + +D K R + ++ K++G + + ++ + ++ + + Y+ Sbjct: 118 TVMRQVFKELQIDSKMLKERLVLSALSQVKNQGRSVSDYLLEDPEDFLDGKIRACIRLYE 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + +DF +LLLR EL+ P +L+ Y+ERF ILVDE+QDTN++Q+ + LLA Sbjct: 178 EKLKQNNALDFDDLLLRCKELFEKFPAVLEKYQERFRYILVDEYQDTNDVQFHLVYLLAK 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY +RGA VENI F + FP + ++LEQNYRST+ IL AN +I Sbjct: 238 KYQNICVVGDDDQSIYRFRGANVENILSFESHFPNCKVVKLEQNYRSTAPILDLANVVIA 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N R KKLWT +G +S + +EA V I+ +D G + + A+LYR+NA Sbjct: 298 ENQHRKQKKLWTAEKEGLKVSFQEYESAKEEAAAV---IRGIRDAGWSYKDQAVLYRTNA 354 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LEE + ++PY+I GG+ F++R+EIKD LSY++++ N+ DD A R++N P RGI Sbjct: 355 QSRLLEEQCIHWNIPYQIVGGVNFYQRKEIKDILSYMKILVNKKDDVALRRIINVPKRGI 414 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G+ +L ++Q + L+G+A S + F E++++ D+ L Sbjct: 415 GEASLLKLQQYGESLGGFSLVESLPFAKAAGLSGKALSMVGSFQEMLESWK----DVELS 470 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 DR+++D+ + E + ++R+EN++EL + SY EE+ D L AFL Sbjct: 471 ALIDRILQDTEYEKDLQAEGAIEAESRMENIQELQGKLQ--SYIEENGDEGSLSAFLEEV 528 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + ++D +D + LMTLH AKGLEFP V++VG+ EG+FPS S+ EEERRL Sbjct: 529 SLLSDLDRSDLTEDKITLMTLHGAKGLEFPVVYLVGLNEGLFPSAQSMFTPEEREEERRL 588 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 YVG+TRA ++L LT R ++G+ S F+ ++PEE +E+ L Sbjct: 589 FYVGITRAEKELYLTAGRDRVVHGQYQSMLVSSFVDDVPEEHLEKKYL 636 Score = 69.5 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 31/52 (59%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y++G RV H KFGEG ++ +E + + V F G K ++A +A+L+ + Sbjct: 742 DYQVGDRVSHTKFGEGEVLAIEEDKKDKLVTVLFDTAGQKKMLAGFAKLKKL 793 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 259/735 (35%), Positives = 402/735 (54%), Gaps = 32/735 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + +LD+LN+ QR A ++ ++AGAGSGKTRVL+ RI +L+ P I+A+TFT Sbjct: 3 NSILDTLNENQRTAATTINEHVRIIAGAGSGKTRVLMARIVYLVQDCGILPNRILAITFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ +G+ + + T H L R+LR P+ F I+D EDQ +L Sbjct: 63 NKAANEMKTRLTAQLGSMTSVVRISTIHSLCVRMLREDADLIGYPKTFAIMDPEDQKAIL 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACD 182 K + K + +D+ +A+ I++ K + P + + V T K+Y Y+ + Sbjct: 123 KPIYKTLEVDKTTISYNRALGAISAYKTNYIDPQMAANMAMDDVSITLAKIYAGYEARRN 182 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LLL H L + + + ++ R I VDEFQD + IQY I+LL G Sbjct: 183 EMKAMDFDDLLLEGHRLLNSVSSVKEKWQNRLDYIHVDEFQDVDPIQYGIIKLLTGKNTH 242 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGD DQ+IY WRGA V+ I +F DF +T+ L +NYRST IL A+NA+I+ N Sbjct: 243 LCVVGDPDQTIYTWRGASVDIILKFNKDFEPCKTVILNENYRSTQPILDASNAVIKYNKE 302 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R+ K L+T E I+++ + +E FV +I G + AILYRSN SR Sbjct: 303 RIDKDLYTKLPGDEKITMFEGKEDSEEPIFVARQINEKHKKGLEYKDMAILYRSNYSSRA 362 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND--------DAAFERVVNTP 414 E +PY IYGG+RF+ERQEIKDAL YLRL NRN+ D A RV+N P Sbjct: 363 FERIFKSVGIPYVIYGGIRFYERQEIKDALCYLRLCTNRNEEDPDQMALDLAVLRVINVP 422 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG RT++ +++ + +R + L+ ++ + L+ + F++LI+ L + Sbjct: 423 RRGIGARTIENLQKQAAERHMNLYDVMKDPI---GLSTAVTKKCEMFVDLIEDLRENREH 479 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L D V+ +G +M ++++ E GQ RI+NL+EL + + ++ M L+++ Sbjct: 480 YALEDFLDYVLDTTGYISMLKEDR-ESGQDRIDNLKELK---EDIAQSMIEDPEMTLESY 535 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RL 592 L AL + Q +T ++ V LMT+H+AKGLEF VF+V +G+FPS + DEGG L Sbjct: 536 LQDIALFTDKTQ-ETSENTVSLMTVHAAKGLEFDTVFLVNFNDGVFPSSRACDEGGMKAL 594 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE-------VR 645 EEERRL YV +TRA + L +T+ T Y ++ + PSRF E+P E + + + Sbjct: 595 EEERRLLYVAMTRAKKTLYITW-NTGFSYMQDAFKTPSRFRAEIPMEYIVQEEKEEAPKQ 653 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QG 704 +A VS+ ++ + + + G V H +G+G ++ + G +AF Sbjct: 654 PKAVVSQSLTGRPSKLGANKKKVRLRKGDAVEHTIYGQGVVLEIRGD----VATIAFGHT 709 Query: 705 QGIKWLVAAYARLES 719 G+K L AA+ ++ Sbjct: 710 IGVKKLNAAHPSIKK 724 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 757 bits (1956), Expect = 0.0, Method: Composition-based stats. Identities = 255/724 (35%), Positives = 401/724 (55%), Gaps = 28/724 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M +L LN++Q+EAV S LLVLAGAGSGKT+V+ H+I +L+ I+A+ Sbjct: 1 MLNDPILSGLNERQKEAVLHFDSPLLVLAGAGSGKTKVITHKIMYLVKHYGIPLNRILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI + +G WV TFH A + LR + ++F I D ED Sbjct: 61 TFTNKAAEEMKERIEKAIGE--KPQWVMTFHSFAAKFLRMEAENIGYDRNFVIYDEEDSK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +L+K+++K +NL+E+++ P + I+ K + ++ Y + + V++ Y+E Sbjct: 119 KLIKKVLKDLNLNEEKFKPDKIKDIISKIKQDDNPEDQLEIY-SISNSYIKTVFEKYEEE 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + DF +LL++ ++ N P +L+ +R +F ILVDE+QDTN IQ+ ++LL GD Sbjct: 178 LKNSNAFDFDDLLIKTVKILSNHPEVLERWRNKFDYILVDEYQDTNRIQHKLLKLLVGDK 237 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD Q IY WRGA ENI F DFPG + ++LE+NYRST IL ANA+I + Sbjct: 238 HTITVVGDPAQCIYTWRGAHPENILDFEKDFPGTKIVKLERNYRSTKKILDCANAVISKS 297 Query: 301 NGRLGK---KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 G+ LWTD +GE I L NE +EARF+ N+IK +G + + A+L R Sbjct: 298 KGKWKGKVLTLWTDKEEGEDIFLVPLENEKEEARFIANKIKQLAQDG-SYGDFAVLVRMT 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +R +EEA + +PY++ GG++FFER E+KD L+YL+L N D A+FER + P RG Sbjct: 357 FLTRNIEEAFISNGIPYQVIGGLKFFERAEVKDILAYLKLAVNPKDYASFERSLTVPPRG 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 +GD+ L+ ++ + QA ++ + LQ ++EL++ + + P Sbjct: 417 VGDKGLEYIKSNFK---TDWIQALKDSYER--FNKSVKIKLQEYLELMEYVLENAKFSP- 470 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ G + ++E + + R+EN+ EL+ + E +++ L F Sbjct: 471 SKTAKEIVERIGYQEYLQKEYEKDWEDRVENINELI-----IALEEAEKEGKTLDQFFEE 525 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 +AL + D Q+ ++MT+H AKGLEF VF+ G+EEG+FPS + D+ +LEEERR Sbjct: 526 SALMQAQDTIDN-QNKAKIMTVHGAKGLEFDTVFVAGLEEGIFPSGRAFDDPTQLEEERR 584 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 L YV +TRA KL LTYA+ R+ YG K V + S+FI ++ E V+ + + H Sbjct: 585 LFYVAITRAKNKLYLTYAKERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQKTQPNVSNRH 644 Query: 657 QRMGTPMVEN----DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 ++ DS ++G V+H FG+G + + G V F+ G K + Sbjct: 645 NLTIKSQSKSYFDFDSDIRVGMLVKHDVFGKGVVKKIVGKN----ATVLFEKVGEKTISV 700 Query: 713 AYAR 716 + + Sbjct: 701 DFLK 704 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 286/666 (42%), Positives = 399/666 (59%), Gaps = 22/666 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN QR+AV L+VLAGAGSGKTRVL R+AW++ + SP ++AVTFTNKA Sbjct: 6 LHHLNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVTFTNKA 65 Query: 67 AAEMRHRIGQLMGTSQ----GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 A EMR+R+ L+G W+GTFHG++ R+LR + +DF ILDS DQ RL Sbjct: 66 AKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDSSDQERL 125 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI---QSYGNPVEQTWQKVYQAYQE 179 KRL + + + W P++ I KD+G+RP + + Q++Y+ YQ+ Sbjct: 126 FKRLCEELGFADAYWTPKRLTHTIGRWKDDGIRPQDLTDREIRKAWERARIQQMYERYQQ 185 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A ++ +DF +LLL +LW +P IL +++RF +LVDE+QDTN++QY WI L+G Sbjct: 186 ALLQSNAMDFGDLLLHCLQLWQQEPAILAAFQQRFRYLLVDEYQDTNHVQYRWICALSGL 245 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQSIY WRGA++ENI +F DFP + IRLEQNYRS+ NIL AA+ LI + Sbjct: 246 HQNLCVVGDDDQSIYSWRGARIENILKFEEDFPQTKIIRLEQNYRSSGNILKAASGLINH 305 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N GR+ K+LWT+ A G+ I Y A N+ DEARFV + I T G + AIL R+ Q Sbjct: 306 NKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVASEILTLCPAG-DYQQAAILVRTARQ 364 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +R LEE L++A +PY++ GG+RF +R E++DAL+YLR++A+ DD AFERV+N P RGIG Sbjct: 365 TRSLEEGLMRAGIPYQVVGGLRFLDRAEVRDALAYLRVVASNRDDVAFERVINLPKRGIG 424 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA-DMPLH 478 L +R+ + + +L A R ++ + G AA L F++LI+ A D+ Sbjct: 425 PGALQSLREIASQERCSLLHAARFAVESNTMKGAAAKGLAAFIQLIEHARSMLADDITPA 484 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +++ SG R EKG RI+NL+EL A + LQ FL Sbjct: 485 EMLTKLLALSGYRDYVR--DLEKGNDRIDNLDELRNALARTE---------SLQLFLEEV 533 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL--EEER 596 AL + V + TLH+AKGLEFP VF+VG+EE + P +++L E + EEER Sbjct: 534 ALATDLQDGGPVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHKLALTEQPEIGLEEER 593 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RLAYVG+TRA Q+L LT A R L+ K V SRF+ ELP+E +E+ R + R + Sbjct: 594 RLAYVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLKELPQEILEDRGFRVSSRRGATG 653 Query: 657 QRMGTP 662 G P Sbjct: 654 SLAGLP 659 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 304/816 (37%), Positives = 425/816 (52%), Gaps = 112/816 (13%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LD LN +QR AV AP +L+LAGAG+GKT+ L RI L++ P I+AVTFTNK Sbjct: 28 YLDDLNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTFTNK 87 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R+G+++G +G W+GTFH ++ ++LR H L +F ILD++DQ+RLLK+ Sbjct: 88 AAREMKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRLLKQ 147 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDRA 184 LI A N+DEK+WP R I+S K+ P + S + ++YQ YQ+ Sbjct: 148 LIVAENIDEKRWPARLLAGLIDSWKNRAWTPAKVPSSEASAYNNRGTELYQMYQDRLRAL 207 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LLL ++ P +L Y+ F ILVDE+QDTN QY W+RLLA + Sbjct: 208 NATDFGDLLLHVVTIFQTHPDVLAQYQRWFRYILVDEYQDTNVAQYLWLRLLAQAHRNIC 267 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+A+I N GRL Sbjct: 268 CVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTPHILAAASAVIAANKGRL 327 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-----ALAECAILYRSNAQ 359 GK LWT+ GE + L ++ +EAR++ + ++ Q +L + AIL R++ Q Sbjct: 328 GKTLWTEREAGEKVRLIGHWDGEEEARWIGDELEALQRGTRAMDPHSLDDMAILVRASHQ 387 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 R E+ L +PYR+ GG RF+ER EI+DA++Y RL + DD AFERVVNTP RG+G Sbjct: 388 MRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRLAVSPADDLAFERVVNTPKRGLG 447 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 D +++ +R ++L RELL + + G+ A+ L+ F+ DA A+ + Sbjct: 448 DTAQQNIQRRARAAGVSLLGGARELLAQGGIGGKGANQLRTFVTSCDAWHYFVANRGNEL 507 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY------------------ 521 + R + + + EN E + R+ Sbjct: 508 EIKRYADQLFVLREERSRLLRELELLDENDEARESVEREIVICGARIGRCERDIAILDGN 567 Query: 522 ------------------------------NEEDEDLMPLQAF------LSHAALEAGEG 545 E + L+ F L H +L E Sbjct: 568 HVLLAEQILEESGYTAMWQADKTPEAPGRLENLKELVKALEQFENLQGFLEHVSLIM-EN 626 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVGV 603 +++ + V +MTLH+AKGLEFP VF+ G E+G+FPSQ S+DE G +EEERRLAYVG+ Sbjct: 627 ESEEAAEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKGVEEERRLAYVGI 686 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE--------------------- 642 TRA T+++A RR+YG+ PSRFI ELPE VE Sbjct: 687 TRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPPGLYGGGYGAAGMQAGF 746 Query: 643 ----------------------EVRLRATVSRPVSHQRMGTPMVEND--SGYKLGQRVRH 678 + RA + +++ D S + L RV H Sbjct: 747 GGGSGIEQRAASADAYNSPGWKRMTERAPTRPMAQPREARNSVIDLDAISSFTLDDRVFH 806 Query: 679 AKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 AKFG GT+V +EG +L VAF G+K LVA + Sbjct: 807 AKFGYGTVVGIEGD----KLDVAFDKAGVKKLVARF 838 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 755 bits (1950), Expect = 0.0, Method: Composition-based stats. Identities = 261/761 (34%), Positives = 394/761 (51%), Gaps = 50/761 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD + L Q AV+ + LLVLAG GSGKTRV+ HRIA L+ + I+ + Sbjct: 1 MDFQQV---LTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHAH-VPAHQILGI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM R+ QL+ + + TFH ++LR + L +F I D+ DQ Sbjct: 57 TFTNKAADEMGERVRQLIPD--SRVEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQQ 114 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQ 175 +L++ ++ +++D + P I+ K++ + +S G+ ++ +VY Sbjct: 115 QLIRFVLNELDIDTVAYNPSTIASMISRAKNDLITVDRFVEIYQESVGDHLQAVAARVYP 174 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + VDF +LLL L P + ER+ ILVDE+QDTN QY I Sbjct: 175 MYQKLLLESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIIMG 234 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L+ +T + + GD DQSIYGWRGA++ENI +F DFP +TIRLEQN+RST IL A+ Sbjct: 235 LSLNTRNLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKEILRVADD 294 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILY 354 LI +N R K L+T+ +G P+ L C +E EA + RI+ D G + AI Y Sbjct: 295 LISHNQRRKVKSLFTENEEGSPVELLCFQDERHEADDIARRIRNAVDQGKQEYTDYAIFY 354 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R N+ SR LE AL + +PY++ G + F+ER E+KD LSYL+L+ N +D AF R+VN P Sbjct: 355 RVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKP 414 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG T + + + + +R ++L +A + L+ RAA+ + RF ++I+ Sbjct: 415 LRGIGKTTQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMVARFAKMINGF-SMADS 473 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + + +I + + +++ E Q RI N+ EL++ +++ +E L+ F Sbjct: 474 GSVAHLMENIIDSTRMVDSWKESPDEADQQRIANVNELLSTAKKYDDIYGEE--TTLEGF 531 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--GRL 592 L + L + Q DT V LMTLH+AKGLE+P VFIVG+E+ + P + L E L Sbjct: 532 LEVSTLASATDQLDTDAGRVTLMTLHAAKGLEYPVVFIVGVEQNLIPHERVLREEFRDGL 591 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP--------------- 637 EEERRL +VG+TRA Q L LT R + G+ S F+ E+ Sbjct: 592 EEERRLFFVGITRAEQNLYLTQTRERSMRGRPWRTITSDFLKEIDVEFNDQSTDELFESR 651 Query: 638 ---EECVEEVRL--------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAK 680 +E VE V+ R + + E G+ +G RVRH + Sbjct: 652 SHFDEFVESVKRGEIDTAALKAANPERPLLMTGADLLKDAPQAAEIPQGFSVGMRVRHPR 711 Query: 681 FGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAYARLESV 720 +G GT++ + G + V F + VAA+ L+ + Sbjct: 712 YGVGTVMGISGFARKRMVNVLFDDADEPQTFVAAHCPLQPL 752 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 753 bits (1945), Expect = 0.0, Method: Composition-based stats. Identities = 285/785 (36%), Positives = 405/785 (51%), Gaps = 73/785 (9%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LND QR AV LLV+AGAGSGKTR L HRIA L+ P I+AVTFTN Sbjct: 2 SFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFTN 61 Query: 65 KAAAEMRHR----------------------------IGQLMGTSQ-GGMWVGTFHGLAH 95 KAA EM+ R + + +W+GTFH L Sbjct: 62 KAAREMKERLQLLLAQKLAQSQFGQPWGTLPAVEQRQLRSRIEREVIKELWIGTFHALFS 121 Query: 96 RLLR------AHHMDANLPQDFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYINS 148 RLLR + F I D D L+K ++ + + LD K+ P++ W I++ Sbjct: 122 RLLRFDIDKFKDPEGLCWTKQFSIYDEADAQSLVKEIVTQELQLDPKRVEPKKIRWAISN 181 Query: 149 QKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHIL 207 K++G P +++ VY+ Y++A +DF +LLL +L + Sbjct: 182 AKNQGWLPDQLEANSEGQRGKLTADVYRRYRKALAANNALDFDDLLLLPVQLLQQNEQVR 241 Query: 208 QHYRERFTNILVDEFQDTNNIQYAWIRLLAG-----------DTGKVMIVGDDDQSIYGW 256 ++ RF ++LVDE+QDTN QY I+LL + V +VGD DQSIY + Sbjct: 242 SYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTGGQDPQLYNEWNGRSVFVVGDADQSIYSF 301 Query: 257 RGAQVENIQRFLNDFPG-------AETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 R A + F DF ++LE+NYRST+ IL AANALI NN+ R+ K L Sbjct: 302 RAADFTILMGFQQDFGDQAADDATRTMVKLEENYRSTATILEAANALIANNSERIDKVLR 361 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRSNAQSRVLEEAL 367 +GE ISL +E+ EA VV+R++ + A+LYR+NAQSR +EE+L Sbjct: 362 PTRGEGELISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVLYRTNAQSRAIEESL 421 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 ++ +PY + GG+RF++R+EIKD L+YLRL+ N D + RV+N P RGIG T+ + Sbjct: 422 VRWRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVPRRGIGKTTIQRLN 481 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 + + LW + ++L GR+A L +F ELI+ L ++ P +V++ Sbjct: 482 DAANQLAIPLWDVVSDGEAVRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVLEK 541 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA 547 SG E ++ + R NL+ELV A Q+ E+ D L+ FL+ AAL + Sbjct: 542 SGYLRELITEATDEAEERRRNLQELVNAALQYQEENEEGD---LEGFLASAALASDADSK 598 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 DT D V LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TRA Sbjct: 599 DTAADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAK 658 Query: 608 QKLTLTYAETRRLYGKEV-YHRPSRFIGELPEECVEEVRLRAT------------VSRPV 654 ++L L++A RRL+G PS F+ ELPE V+ R+ ++R Sbjct: 659 ERLFLSHASERRLWGGMREPAVPSIFLAELPEALVQGDIPRSGGAALRREQRLERLTRVD 718 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 + V + +G++V HA FGEG + + GSGE + V F G G K L Sbjct: 719 RAEAQPKARVSAARSWSVGEKVIHANFGEGEVTHTFGSGEKISIAVKFIGMGSKILDPRL 778 Query: 715 ARLES 719 A +E Sbjct: 779 APIEP 783 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 241/678 (35%), Positives = 374/678 (55%), Gaps = 17/678 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +L +LN+ QREAV LV+AGAGSGKTRVL ++IA+L++ + P++I+A+TFT Sbjct: 8 EAILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLLN-KGLKPWNILALTFT 66 Query: 64 NKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ RI Q+ +++GTFH + R+LR +F I D D L Sbjct: 67 NKAAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRSL 126 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQ 175 +K ++KA++LDEK + P +I+ K+ + +E+ +Y+ Sbjct: 127 IKSIVKALDLDEKTYKPASVHNFISMAKNHLITASEYAEDRAAIERDRSARMPAIHMIYK 186 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 AY+ C +A +DF ++LL L+ + I + Y ++F ILVDE+QDTN Q + I Sbjct: 187 AYEARCRQANAMDFDDILLYTFLLFRDNKEIREKYGQQFEYILVDEYQDTNYAQVSIISQ 246 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA ++ +VGDD QSIY +RGA ++NI F + F A+ +LE+NYRST I+ AAN+ Sbjct: 247 LAETHRRICVVGDDYQSIYSFRGANIDNILDFKHKFDDAKLFKLERNYRSTQLIVQAANS 306 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILY 354 L+++N ++ K +++ A+G+ I +++ +EA V N +K + N AILY Sbjct: 307 LMKHNERQIPKDVFSKEAEGDKILYKPCYSDREEAMVVANELKRIKRNDDCDYGNFAILY 366 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR E+ + +PY+I GG+ F++R+EIKD ++Y RL++N ND+ AF R++N P Sbjct: 367 RTNAQSRSFEDEFRKQGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYP 426 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETA 473 TRGIG+ T+ + ++ ++LW+ +Q + + L F LI + A Sbjct: 427 TRGIGNTTIQKIIDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNVA 486 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS---YNEEDEDLMP 530 + +I++SGL + R ENLEE ++A + F E E+ + Sbjct: 487 LKDAYELGKEIIEESGLSADIRSGSEPEDLARRENLEEFMSAMQGFVDSGREEGREENVY 546 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L +L AL + D V LMT+H+AKGLEFP VF+VG+EE +FPS MS Sbjct: 547 LTDYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEENIFPSPMSASSKR 606 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEERRL YV +TRA + LT A+ R YG PSRF+ + + + Sbjct: 607 EIEEERRLLYVAITRAERHCILTNAKNRFRYGSMQVDNPSRFLNDFDPALIH---VEDEA 663 Query: 651 SRPVSHQRMGTPMVENDS 668 + +R P E++S Sbjct: 664 NSAFGGERRKMPWDEDNS 681 Score = 62.5 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 32/51 (62%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G + H +FG G ++N+EGSGE+++ V F+ G K L+ +A+ + + Sbjct: 800 LSVGVTIEHQRFGIGKVLNLEGSGENAKATVEFRNAGTKQLLLKFAKFKII 850 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 257/730 (35%), Positives = 415/730 (56%), Gaps = 28/730 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ L LN Q+EA S+L ++AGAGSGKTRV+ +RIA+L+ P I+A+ Sbjct: 1 MELDEL---LNKNQKEAATYLDSHLRIIAGAGSGKTRVVTYRIAYLIDEIGVDPRKILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G G V T H L R+LR H N P +F I+D EDQ Sbjct: 58 TFTNKAANEMKERITSLLGPHALGSLVCTIHSLCVRILRRHINVINYPSNFMIMDEEDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW--QKVYQAYQ 178 L+K++ +++D K + + I++ K + P + KVY+ Y Sbjct: 118 ALIKKIYNNLDIDAKTISIKSMIASISNYKMANIDPERAMELAGQFQGEIKKAKVYKEYL 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + ++DF +LLL+A ++ N P +L+ ++ +F I VDEFQD NI+Y ++L++ Sbjct: 178 EYQENHFMLDFDDLLLKAVYIFENYPDVLEKWQHKFQYIHVDEFQDVGNIEYRLVKLMSQ 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D +VGD DQ+IY +RGA V I F DF +T+ L+QNYRST NIL+ +N+LI Sbjct: 238 D-AITCVVGDPDQTIYSFRGANVNYILDFDKDFKPCKTVILDQNYRSTGNILNISNSLIR 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN--GGALAECAILYRS 356 N RL K L+T+ G + Y +E +EA ++ ++I+ G + AILYR+ Sbjct: 297 KNRNRLEKDLYTEATGGSEVIHYMGKSEQEEADYICSQIEKIISEVDGVNYRDFAILYRA 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N SR +E++++ + YRI+GG++FF R+E+KDALSYL+L+ N ++D AFER++N P R Sbjct: 357 NYLSRTIEQSMISHGIDYRIFGGLKFFSRKEVKDALSYLQLVCN-DEDLAFERIINVPAR 415 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG +TL+ ++ + + Q++L++A + L+ +A + ++ ++ Q + +P Sbjct: 416 GIGKKTLENIQLVALNNQVSLYEALTLFSDQIKLSSKAKKEIITLVKAVETAKQSS--LP 473 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 LH + ++ D G M +++ + RI+N+ EL + + + ++ D+ ++ +L Sbjct: 474 LHEMFENLMNDVGYIDMLKKDLEDN---RIDNIHELQRSI--YEFQNQNPDIATIENYLQ 528 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEE 595 +L D Q V LM++H AKGLEF VF++G+ EG+FPS +L E LEEE Sbjct: 529 EISLYTDNDNLDDGQ-YVSLMSIHMAKGLEFDYVFVLGLSEGIFPSFRALSESDEGLEEE 587 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV--RLRATVSRP 653 RRLAYV TRA ++L LT +E + + SRFI E+ E ++ V + R + Sbjct: 588 RRLAYVAFTRARKQLFLTDSEG-FSFVTDSPKISSRFIDEIGSEGIKHVGTKPRFKTANF 646 Query: 654 VSHQRMGTPMVEND--SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 ++ +V N+ + + G V H FG+G +V + G+ L +AF+ G+K L Sbjct: 647 INTAPTKEELVGNNEVTDWSNGDFVLHDTFGKGVVVKVNGN----TLDIAFELPAGLKTL 702 Query: 711 VAAYARLESV 720 +A + L+ + Sbjct: 703 MANHKALKKL 712 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 748 bits (1932), Expect = 0.0, Method: Composition-based stats. Identities = 272/749 (36%), Positives = 426/749 (56%), Gaps = 46/749 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S +LD LN++QR+A +L+LAGAGSGKTR + +RIA ++ SP +I+A+TF Sbjct: 1 MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R L+G + V TFH + RLL+ + ++F I D +DQ + Sbjct: 61 TNKAAREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI 120 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN---PVEQTWQKVYQAYQ 178 + ++ K M + D P + I+ K++G+ ++ + P + + ++YQ Y Sbjct: 121 ITKIKKEMGIKDNDNVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFGEIYQKYD 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E +DF++LLL A +L + +L+ +ER+ I+VDE+QDTN+IQY I ++A Sbjct: 181 EVLKANNAMDFSDLLLNARKLL-DDTFVLERIQERYKYIVVDEYQDTNDIQYEMINMIAA 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD+DQSIY +RGA + NI F D+ A T++LE+NYRST IL AN LI+ Sbjct: 240 KYRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIK 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN GK LWTDG+DGE I +Y A DEA F+V +K + +G + ILYR+NA Sbjct: 300 NNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNA 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRVLEE LL A++PY+IYGGM+FF+R+EIKD L+YL L+ N+ND+ F R++N P R + Sbjct: 360 QSRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSV 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TL+ +++ + ++ +++ +A + E + AL+ F L+ + +M + Sbjct: 420 GEKTLEKIQEVANEKNISMLEAL-HYIDEIPVRAATKLALKEFYNLMQGIYSSLEEMSIK 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 D ++ +RT Y + + R++N+EEL+ + + + M L +L Sbjct: 479 EIFDEIL----IRTRYIDSIEDNKEDRVKNIEELLNSIIELEKQNPN---MSLNEYLDMI 531 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + + ++ V+LMT+HS+KGLEF VF+ GME+G+FPS LEEERRL Sbjct: 532 SLSSSTDEMEDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSISFDSPEEELEEERRL 591 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVY-HRPSRFIGELPEECVEEVRLR-ATVSRPVSH 656 YV +TRA ++L ++Y+ +R+++GK+ RPSRFI E+ ++ +E V + A++ S Sbjct: 592 CYVAITRAKKELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYVGGKYASLKGQSSA 651 Query: 657 QRMGTPMVEN------------------------DSGYKLGQRVRHAKFGEGTIVNMEGS 692 R TP +EN +S YK+G V H KFG G I ++ Sbjct: 652 PRSFTPKIENFNPFSKDKLGTFGKKSGSQTTSNVNSKYKVGDVVNHKKFGRGKIKKVDMK 711 Query: 693 GEHSRLQVAFQGQGIKWLVAAYAR--LES 719 V G K + A LE Sbjct: 712 SMIVEFMV-----GEKKIALVLADKILEK 735 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 268/716 (37%), Positives = 387/716 (54%), Gaps = 23/716 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q AV A L+LAGAGSGKTR ++HRI L+S +P+ I+AVTFTNKA Sbjct: 1 MADLNPAQLAAVEAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKA 60 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 AAE++ R+ +L+G GG+ GTFH ++ RLLR + P+ FQ++D++DQ L+KR+ Sbjct: 61 AAELKSRLSELIGDDGGGVVSGTFHAISLRLLRRYAEALAYPRSFQVIDADDQKALVKRI 120 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 +K N+ + P + +I K G + + + +Y YQ+ Sbjct: 121 LKQANIPADRLHPSFLLGWIEHCKHAGQTAEQAPA-CDWNGVDLRGLYSTYQQQLREHER 179 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF++L+L L I + + RF +ILVDE+QDTN +Q+ W+ LL + +V Sbjct: 180 MDFSDLILNCVLLMREHADIAEALQRRFDHILVDEYQDTNPVQHEWLTLLCAGHRNLTVV 239 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA + +I F + GA T RLE+NYRST IL ANA+I N R K Sbjct: 240 GDDDQSIYGWRGADIRHILEFERIWSGAGTHRLEENYRSTGAILDLANAVISKNEDRHDK 299 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEA 366 L G +E DEAR + +++ W+D G A E A+LYRSN QS LE+ Sbjct: 300 SLRATQEQGLLPQWQVCNDEYDEARQIGTQLQAWRDAGYAWQEMAVLYRSNRQSLALEQI 359 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + +PYRI GG+ FFER EIKDAL+Y L+ D R+ N P RGIG + + + Sbjct: 360 LREQGLPYRIVGGVGFFERLEIKDALAYWALLNGCGDALQLMRICNRPKRGIGLKGQEQL 419 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 L + L + G A L LI +L + +P +++ Sbjct: 420 AAQLSGSGLRAHEWLD--LVAEGGVGGVAGKLAPLARLIASLRPQAGTLPDRGLM-ALLQ 476 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE---AG 543 +SG + + +RI+N+ L +++ ++++ P+ F+ AAL Sbjct: 477 ESGYLDSLQAMGELEAASRIDNIHTL----QRYIELTMEQEITPI-EFMDRAALLQSGEE 531 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLAYVG 602 G+ D +++V LM+LH AKGLEF V + G+EEG+ P Q +LD+G + EERRL YVG Sbjct: 532 AGRDDENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDGEAGIAEERRLLYVG 591 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 +TRA + L LT A RRL+G+ Y PSRFI LP +++ AT + Sbjct: 592 ITRARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVAT----------ASA 641 Query: 663 MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 M N +G V H FGEG I++ EGSG+ R+ V F+ GIK L+ YA L+ Sbjct: 642 MQNNSGDMGVGSNVLHPSFGEGVIIDFEGSGDAIRVTVQFRKAGIKRLMLKYAALQ 697 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 745 bits (1923), Expect = 0.0, Method: Composition-based stats. Identities = 258/660 (39%), Positives = 372/660 (56%), Gaps = 18/660 (2%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 + LN+ Q A + LL+ AGAGSGKTRV+V+RIA L+ PY I+AVTFTNKAA Sbjct: 22 EELNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTNKAA 81 Query: 68 AEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EM+ R+ L+G +WVGTFH + RLLR HH A L ++F I D +DQ ++ R+ Sbjct: 82 TEMKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHEAAGLDKNFIIYDDDDQRAVMNRV 141 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 +K +NLD++++PPRQ + I+++K EG P + G + + ++AY+ A Sbjct: 142 LKELNLDDRRYPPRQVLSRIHAEKQEGRGPAEFERKG-YFDDAIARCFEAYERHLKAASA 200 Query: 187 VDFAELLLRAHELWLN-KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF +LLL + + + + R RF ++LVDEFQD N +QY +R + + Sbjct: 201 VDFDDLLLAVLRIAEDPTSYAGEDLRGRFRHVLVDEFQDVNQVQYRLVRAFCKSHDNLCV 260 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA V ++ F DFP A ++LEQNYRS +++ A +I + + R Sbjct: 261 VGDDDQSIYRWRGADVRIVRGFRRDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDREP 320 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+LWT DG PI + A +E DEA +VV ++ G + E A+ YR +AQSRVLEE Sbjct: 321 KELWTANQDGAPIDVVAADSEHDEAAWVVECVRELIAEGVSPNEIAVFYRIHAQSRVLEE 380 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L +A +PY+I GG RFFER E+K+ LSYLR+IAN D R++N P R IG T+D Sbjct: 381 VLREARIPYQIIGGTRFFERAEVKNLLSYLRVIANPKSDVDLNRIINVPARKIGQSTVDK 440 Query: 426 VRQTSRDRQLTLWQACRELLQE------------KALAGRAASALQRFMELIDALAQETA 473 + Q + ++L++A LL+ LA A +L F +LI L E Sbjct: 441 LIQAADLLGVSLFEAIDPLLEGRVPPSAMPGGQLPPLASAAKRSLLGFRDLIHGLMTEAK 500 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMPLQ 532 + V+ SG EQE + + R++NL ELV + + D L Sbjct: 501 SASPSALAEEVLARSGYAKALEQEDSVESEARLQNLRELVQSLVDYEQEATAAGDEATLA 560 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS-QMSLDEGGR 591 +L +L + V +MT+H+AKGLEF VF+ GMEE +FP + G Sbjct: 561 GYLERVSLVSDVDALADVP-KVAMMTIHAAKGLEFHAVFLTGMEEDLFPFRSQDPNRKGD 619 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 +EEERRLAYV +TRA ++L +T+A R ++G+ Y PSRF+ +LP V + A++ Sbjct: 620 IEEERRLAYVAITRARERLWITHAARRAIFGQTRYGLPSRFLADLPPASVRPIATPASMM 679 Score = 43.7 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 + G RV H +FG G + +++ G V F G G K + A+ Sbjct: 772 LRRGMRVYHERFGPGVVESVDP-GADPIATVKFSGWGKKRIKVAF 815 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 253/730 (34%), Positives = 405/730 (55%), Gaps = 42/730 (5%) Query: 17 AVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQ 76 AV +L ++AGAGSGKTRV+ RIA+L+ + P I+A+TFTNKAA EM+ R+ Sbjct: 14 AVTCVDRHLRIIAGAGSGKTRVVTTRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEG 73 Query: 77 LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQ 136 +G + + + T H RLLR + P++F ILD++DQ +L+ K + +D K Sbjct: 74 FLGDTAQAVMISTIHSFCVRLLREDILVHGYPRNFTILDADDQRSILRDAYKQLQVDVKT 133 Query: 137 WPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRAGLVDFAELLLR 195 + + + YI++ K + + + N E+ VY Y++ +DF +LL+ Sbjct: 134 YSYHRVLSYISNNKTNFIDANSALARANYEGERIMANVYAFYEKRLAEMFGLDFDDLLIF 193 Query: 196 AHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYG 255 + + + + ++ RFT + VDEFQD + +QY I++L + + +VGD DQ+IY Sbjct: 194 TYHILKEHVEVRKKWQRRFTYLHVDEFQDVDMLQYQIIKMLVKEDSYLCVVGDPDQTIYT 253 Query: 256 WRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG 315 WRGAQV+ I F DFP + T+ L +NYRST IL A+N LI+NN R+ K+L+T Sbjct: 254 WRGAQVDIIMNFEKDFPHSHTVILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESD 313 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYR 375 E I + A ++ +E +V +I + NG + A+LYRSN SR LE+ALL +PYR Sbjct: 314 ERIVHFTAMDDYNEPIWVAGKILSLHHNGVKYRDIAVLYRSNYLSRGLEKALLDQHIPYR 373 Query: 376 IYGGMRFFERQEIKDALSYLRLIANR--NDD------AAFERVVNTPTRGIGDRTLDVVR 427 IYGG+RF++R EIKDALSYLRL+A + DD A +R++N P RGIG +TL+ + Sbjct: 374 IYGGVRFYDRAEIKDALSYLRLLAPKVEGDDKELFKNLAVKRIINLPKRGIGAKTLETLE 433 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 Q + + +++ ++ K G+A ++ +F+E+I+A + + +V++D Sbjct: 434 QEAAAKDTNMYEILKQGGFGK---GKAKESIAKFVEVIEACRSCVDTISIDQLLSKVLED 490 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA 547 SG M + + R+ENL+EL++ + N D L +L +L + + Sbjct: 491 SGYMEMLRNDAEIE---RLENLKELISDIANYVENNPDG---SLLDYLQEISLYSDKEDL 544 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTR 605 D + VQLMT+H+AKGLEF +VF+ + +G+FP++ S++EGG+ LEEERRLAYV TR Sbjct: 545 DNGE-FVQLMTIHAAKGLEFDRVFVYSLCDGIFPNERSINEGGQQALEEERRLAYVAFTR 603 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV--RLRATVSRPVSHQRMG--- 660 A ++L L+ + Y + SRF+ E+P++C++EV + R + + V + Sbjct: 604 AKKQLFLSDSYGYS-YVLDKLKTTSRFVKEIPQDCLQEVGAKPRNSFASDVDTYQGSGFS 662 Query: 661 ----------TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKW 709 + + G V H FGEG ++ +EG +AF GI+ Sbjct: 663 SLGNTTDEAIEHTSKKKGKIRKGDLVVHDVFGEGIVIKLEGE----LAVIAFDKKYGIRK 718 Query: 710 LVAAYARLES 719 ++A +A L Sbjct: 719 ILATHASLHK 728 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 743 bits (1920), Expect = 0.0, Method: Composition-based stats. Identities = 261/729 (35%), Positives = 394/729 (54%), Gaps = 37/729 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L+ LN +Q++A L V+AGAG+GKTR L RIA+L+ +P SI+AV Sbjct: 1 MKMTNWLEQLNPQQKKAATHISGPLFVVAGAGTGKTRTLTTRIAYLIEELGVAPDSILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQILDSED 118 TFTNKAA EM+ RI ++ G W+ TFH ++LR +F I+D +D Sbjct: 61 TFTNKAAREMKERIVEMAGPYATNTWIYTFHAFGVKVLRRDIEHLKMGYTVNFNIIDEDD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 +++++IK +NLD K + I+ K +I + N E+ V + Y Sbjct: 121 AKAMVRKIIKDLNLDTKSYKANAIRHKISLFK-----HLNIDYFDNANERL---VLEKYT 172 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 L+DF +L + ++L+ HIL++Y+ +F ILVDEFQDT+++QY ++LLAG Sbjct: 173 HELITNNLLDFDDLQILTYKLFDEHQHILEYYQNKFNFILVDEFQDTDHLQYKMMKLLAG 232 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPG----AETIRLEQNYRSTSNILSAAN 294 + +VGD DQSIY +RGA +N + FLNDF I L+ NYRST IL AN Sbjct: 233 KQKNLFVVGDPDQSIYAFRGANYDNAKFFLNDFKNEDGSKAEIVLDLNYRSTKEILKFAN 292 Query: 295 ALIENNNGR-LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAI 352 LI +N R K L TD +G ++ A ++L+EA+ + N I+T +D G ++ AI Sbjct: 293 KLITSNKNRPFSKSLETDLGNGLKPFIWSAQSDLNEAQMIANEIETLIKDGGYKYSDIAI 352 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NA SR E+ ++ ++PY +YGG+ F++R+EIKD L+Y+RL+ + N D R++N Sbjct: 353 LYRNNALSRSFEDVFMKYNIPYVLYGGISFYQRKEIKDILAYIRLVVDPNLDFYLMRIIN 412 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP R IG TL+ ++ +++ ++++ A ++G+ +L F LI + + Sbjct: 413 TPRRAIGPTTLNKLQSYAKEHNMSMFDAIDSF----DISGKTKQSLLEFKTLILEMKFDF 468 Query: 473 ADMP-LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + L D V +G M E +K E + RIE ++EL Q E L L Sbjct: 469 QNFTELGKVVDYVAYKTGYNQMLETDKDEYSEERIEYIKELKNPFVQAEAYYEGTFLEKL 528 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L AL + + DAV L T H KGLEF VF+ MEE +FPS S + Sbjct: 529 MQLLDQIALYSDLD-RNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQIFPSSQSFMDLNE 587 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 LEEERR+AYVGVTRA ++L LT +E R LYG +Y RPSRF+ E+ E +EV + Sbjct: 588 LEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKEMMPE--QEVFTKKGNY 645 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 P + + K G V H FG+G +V++ + +AF GIK L Sbjct: 646 TPQQST--------SSNYLKPGDSVTHQVFGKGIVVSV----DKDIATIAFSMPHGIKQL 693 Query: 711 VAAYARLES 719 + ++ ++ Sbjct: 694 LESHPSIKK 702 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 257/679 (37%), Positives = 385/679 (56%), Gaps = 16/679 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S L++LN+ Q+EAV LL++AGAGSGKT+VL RIA +++ + P I++V Sbjct: 1 MINSEYLNNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EM++R+ ++ + G+ W+GTFH + +LLR H A L +F I+D++DQ Sbjct: 61 TFTNKAAKEMQNRVSSILNSEAIGLSWLGTFHSICAKLLRKHAPAAGLTSNFTIIDTDDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQ 178 +RL+K + KA N+D KQ P+ + I+ K++G P + + + E+T + +Y+ YQ Sbjct: 121 VRLIKNICKAENIDIKQLAPKFILSIIDRWKNKGFHPDEVVINKNDIFERTIRPLYKIYQ 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + DF +L+L ++ I Y F ILVDE+QDTN IQ W+ LL+ Sbjct: 181 QKLLDLNACDFGDLILHVVKILEKNHDIRNIYSNNFKYILVDEYQDTNYIQSRWLNLLSE 240 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGDDDQSIY WRGA+++N F + ++ IRLE+NYRS+ NILS A+ LI Sbjct: 241 KHKNLCCVGDDDQSIYSWRGAEIKNFLEFDQVYKNSKVIRLEENYRSSQNILSVASNLIA 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN R+GK L T +G+ + L C N DEA V + I+ + AIL R+ Sbjct: 301 NNQNRVGKTLKTTMEEGDLVKLNCFKNGKDEAIGVSDEIEKKLKKKYSFNNIAILVRAIF 360 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q+R EE L+ +PYRI GG +F+ER EIKD ++YLRLI DD AF+R+VN P R I Sbjct: 361 QTREFEERFLKIGLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNNPKRAI 420 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ--ETADMP 476 G+ T+ ++ + S+ ++L A ++L++E + + L F+ L+D + Sbjct: 421 GESTIKLIHEFSKTNAVSLEIASKKLIEENLIKPKTKIGLSSFLFLMDKWRNDINIKKIN 480 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 V+ +SG +M + +K + + R+EN++EL++A + F L+ FL Sbjct: 481 HVKLLQLVLDESGYSSMLKNKKDLENENRLENIKELLSAMKDFDN---------LENFLE 531 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEE 594 H AL Q D + V +MT+H +KGLEF VF+ G EEG+FP Q S++E G+ LEE Sbjct: 532 HVALATSVDQ-DWDGEKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKSIEEKGQNGLEE 590 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRLAYVG+TRA +K +++A R G + SRFI ELPE+ +E+ Sbjct: 591 ERRLAYVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEKFLEKNSFFDDSKDNE 650 Query: 655 SHQRMGTPMVENDSGYKLG 673 + G Sbjct: 651 EDFEFNQDFEIEEGTRSPG 669 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 743 bits (1919), Expect = 0.0, Method: Composition-based stats. Identities = 255/661 (38%), Positives = 382/661 (57%), Gaps = 23/661 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L LN QR+AV S L++AGAGSGKTRVL RIA+++ + +PY+I+A+TFT Sbjct: 3 SQILKGLNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMIE-QGVAPYNILALTFT 61 Query: 64 NKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA +MR RI Q++ + + +GTFH + R+LR + PQ F I + D L Sbjct: 62 NKAAEQMRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGFPQSFTIYEPSDCKNL 121 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQ 175 LK ++K +NLD+ ++ P I+ K+ + P + + + +Y Sbjct: 122 LKTIVKELNLDDTKYKPAMLASRISYAKNCLVTPGAYLANAGAAAEDRRMQIPEFGNIYN 181 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y C R G +DF +LLL+ + L + P + Y+E+F ILVDE+QDTN QY IR Sbjct: 182 IYCARCKRNGAMDFDDLLLQTNILLRDCPDVTARYQEQFKYILVDEYQDTNYAQYVIIRR 241 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L+ KV +VGDD QSIY +RGA++ENI F DFP A +LEQNYRST I+ AAN+ Sbjct: 242 LSQLHSKVCVVGDDAQSIYSFRGAKIENILSFKKDFPNAMIFKLEQNYRSTRTIVEAANS 301 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILY 354 +IE N+ R+ KK +++G GE I + A+ + +EA VV+ ++ + G AE AILY Sbjct: 302 VIERNSKRMEKKCFSEGDMGEKIRVLRAYTDREEAEMVVSDLRDKVRAAGDEWAEAAILY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+N QS+ LE+AL + +PYRIY G F++ +EIKD L+Y+RL+ N DD AF+R+VN P Sbjct: 362 RTNNQSQALEDALRRKGIPYRIYKGNSFYDHKEIKDLLAYIRLVINPRDDEAFKRIVNYP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDALAQE 471 RGIGD T++ + ++ R L++W+A L E + + F+ L+ L+ Sbjct: 422 ARGIGDTTVERIALLAKARNLSMWEAVDALTAEPVTDPVQKTIVRKVAEFVALVRGLSLA 481 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE------- 524 A+ L+ + SG+ Y E + + ++N+EEL+ + + F+ E Sbjct: 482 RAEKGLYDLGLEIATRSGIIGAYRAENTPEATSALDNIEELLNSMQLFNEQREAEIRAGE 541 Query: 525 --DEDLMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFP 581 E+ ++ +L L + D + V LMT+HSAKGLE+ V+IVG+EE +FP Sbjct: 542 RQQEERATIEEWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGLEYKFVYIVGLEENLFP 601 Query: 582 SQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 SQ +++ EEERRL YV +TRA + TL+YAE R +G + RPS F+ E+ + Sbjct: 602 SQRAVESPDGFEEERRLFYVALTRAKELATLSYAEMRFKWGNMEFSRPSCFLREIDSRYL 661 Query: 642 E 642 E Sbjct: 662 E 662 Score = 64.1 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 33/74 (44%) Query: 647 RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 R+ R + + Y +G RV H KFG G I +E +L V F G G Sbjct: 740 RSVGVRQGESSLVEGAAPVSCGDYAVGDRVSHLKFGAGVIRRIETLASDHKLVVEFSGYG 799 Query: 707 IKWLVAAYARLESV 720 K L+A +A+L + Sbjct: 800 EKTLLAKFAKLTKL 813 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 248/744 (33%), Positives = 401/744 (53%), Gaps = 44/744 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+++ LL+ LNDKQREA + ++L+LAGAGSGKTR + +RIA ++ SPYSI+AV Sbjct: 1 MNLN-LLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G + TFH RLLR + + +F I D++DQ Sbjct: 60 TFTNKAAKEMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQK 119 Query: 121 RLLKRLIKAMNL--DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 R++K ++K N+ + + R + I+ K+E P + + + +VY Y Sbjct: 120 RIVKAILKGQNISFNGVKLTERDIVSIISKIKEEIKTPDEY----SVINKQIIEVYDKYN 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A + +DF+++LL ++L P IL+ + ++ I++DE+QDTNN+QY I L+A Sbjct: 176 KALLESNAMDFSDILLNTYKLLQK-PEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIAR 234 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGD++QSIYG+RGA + NI F N++ A+ ++LE+NYRST+ IL AAN LI+ Sbjct: 235 KSSNLCVVGDENQSIYGFRGANILNILNFENNYNNAKIVKLEENYRSTTTILDAANELIK 294 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN KKLWT G+ I + N DE ++ I+ NG + ILYR+NA Sbjct: 295 NNKSSKDKKLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRENHQNGVPYRDMTILYRTNA 354 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+ EE LL+ ++P++++GG+ F+ R EIKD ++YL +I N D+ +R++N P R + Sbjct: 355 QSRIFEEGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKV 414 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++ ++ + +R+ L L +A + + L L ++I L Sbjct: 415 GEKGIEKIIAYARENDLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKELKDLAYTETAS 474 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +I Y E + + RIEN++E + + E + L +L + Sbjct: 475 YIVQTLIDKIHYI-DYINENYDDAEARIENIDEFKNSILEL---ENVVGELRLNEYLENV 530 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + D V+LMT+H++KGLEFP VF+VG E +FP ++ + +EEERRL Sbjct: 531 SLISATDDLEEKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRAMLDEKEMEEERRL 590 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 YV +TRA +KL L++A R +YG++ PS F+ E+PE+ ++ Sbjct: 591 CYVALTRAEKKLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYSD 650 Query: 643 -----------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 E + ++ T V ++ G+K+G +VRH KFG G I +++ Sbjct: 651 EINTYGNNKKFEKKKTEINTKNTIKLDENTKKVIDNLGFKVGDKVRHKKFGLGVIKSIDA 710 Query: 692 SGEHSRLQVAFQGQGIKWLVAAYA 715 + + G K + A Sbjct: 711 KKIYVQYV-----DGTKEMALILA 729 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 269/789 (34%), Positives = 402/789 (50%), Gaps = 72/789 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + YLL SLN Q+EAV L++AGAG+GKT+ L RIA L+ +P I+AV Sbjct: 1 MSIDYLLQSLNPMQQEAVLHQNGPCLIIAGAGTGKTKTLTTRIAALIEN-GVNPNRILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAA+MR R+ L G +W+ TFH RLLR + L +DF I D +Q Sbjct: 60 TFTNKAAAQMRERVEALAPGQSGRVWIHTFHSFGVRLLRQNAHLLKLTKDFAIYDESEQK 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ----SYGNPVEQTWQKVYQA 176 +++ +++ M + + Q + I+ KD+ + P + + +VY+ Sbjct: 120 KIITLVLQEMGQKDAKKEINQYISLISRAKDDMIDPESFAISALASNIDFKIRAAEVYKR 179 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ + AG +DF +LL++ EL N + ++Y+ F +ILVDE+QDTN+ QY R L Sbjct: 180 YQNKLNAAGALDFGDLLVKTAELLKNNEDVREYYQNIFQHILVDEYQDTNHTQYIITRTL 239 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + +VGD DQSIY WRGA + NI F DFP A+ I LEQNYRST IL ++N L Sbjct: 240 AYKHRNLCVVGDPDQSIYSWRGANIRNILEFEKDFPDAKIITLEQNYRSTQIILDSSNKL 299 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I+ N R K L+++ GEPI + E +EAR+ I ++G +L + A+ YR+ Sbjct: 300 IKKNKKRKDKSLYSNKTSGEPIEVRELLTEGEEARWTAQNIANLIEDGASLNDIAVFYRT 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSR E+ + +PYR+ G +RF++R+EIKD L Y R++ N D + R++NTP R Sbjct: 360 NAQSRNFEDNFRKYQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSLLRILNTPKR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG + + + ++L+QA + + L A A Q F+ L+D L E Sbjct: 420 GIGKTAEEKFLEYANLHNISLYQALQRSAFVEGLTPTARRAAQEFINLMDTLRLELKVTS 479 Query: 477 LHVQTDRVIKDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQA 533 ++++ SG E E K + R++NL+ELV A +++ E L Sbjct: 480 PTDIVNKILTLSGYWKAVEDEVEKDLEAGARLDNLQELVNAVKEYEERMARTEREASLSD 539 Query: 534 FLSHAALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 F+ +L G + D+ AV LMT+H AKGLEFP VF+ G+EEG+FP +S + L Sbjct: 540 FVQEISLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLFP--LSSKDDDDL 597 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGK----------------------------- 623 EEERRL YV +TRA +L +TY TRR++GK Sbjct: 598 EEERRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNLPSRFLFESGLITEEQEGPLNRQST 657 Query: 624 -----------------EVYHRPS--RFIG-------------ELPEECVEEVRLRATVS 651 E +RPS F E+ E+ + Sbjct: 658 VMPNYGGYKTKYGSKYGETQNRPSFKPFFAAPKKQKKYDEHGYEIEEQEGDYGAPIGCAP 717 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 ++ + + + G + GQRVRH FG+G ++ + GSGE +++ V F + + Sbjct: 718 LGIAGENEAPAVHVSAQGPRTGQRVRHGVFGDGKVIVIAGSGEAAKITVMFANGVKRTFM 777 Query: 712 AAYARLESV 720 YA L+ + Sbjct: 778 LKYAPLQLL 786 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 259/752 (34%), Positives = 388/752 (51%), Gaps = 49/752 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD LL LN+KQ EAV S LLVLAGAGSGKT+VL +IA+ + +N S Y I+A+ Sbjct: 1 MD---LLKGLNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKA EM+ RI + MW+GTFH + ++LR + +F I D +DQ Sbjct: 58 TFTNKAGKEMKERIENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQK 117 Query: 121 RLLKRLIKAMNLDEKQWP---PRQAMWYINSQKDEGLRPHHIQSYGNPVE--QTWQKVYQ 175 +LK + K NL + + I+ K + ++ Y + +K+Y+ Sbjct: 118 LVLKEIFKQ-NLTWESVLGEFKNAIIGIISDAKGKNVKSSEFSKYFSFGNNTDVVEKIYK 176 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+E + +DF +L+ + EL+ P +L +Y E+F I VDE+QDTN+ QY I+L Sbjct: 177 KYEEILIKNNALDFDDLIFKTIELFKKCPEVLDYYSEKFKYIYVDEYQDTNDAQYEIIKL 236 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA V VGD DQSIYGWRGA + NI F NDFP ++ I LE+NYRST IL AN Sbjct: 237 LASKYKNVCAVGDIDQSIYGWRGANISNILNFENDFPNSKIILLEENYRSTQKILDCANE 296 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI+NN R K LWT G+ I NE EA V + G L++ A+LYR Sbjct: 297 LIKNNVNRKEKNLWTKKEGGDEIIYKSYQNENYEAIEVAQNVSNLIFEGYNLSDIAVLYR 356 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 +N QS +E AL + S+ YR+ GG++F++R+EIKD L+YL+LIAN DD AF R++N P Sbjct: 357 ANFQSFAIENALRKNSIAYRMVGGLKFYDRKEIKDILAYLKLIANPKDDNAFRRIINYPK 416 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 R IG+ +L + + ++L+ +++ + + + F ++I D Sbjct: 417 RSIGNVSLQKLEEYCYSENISLFDGLFRNEFLDSVSKKLRTEFENFRDMIFGFITCVEDT 476 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 + + ++ + + ++ + + EN+ + + L +L Sbjct: 477 EVEILIKELLDSIKFVDYLRENEKKEFEKKAENINLFLEEISN------SYKGIKLLEYL 530 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE-GGRLEE 594 +L + + + D V L T+HSAKGLE+ VFI+GM+EG+FPS+ S+ E LEE Sbjct: 531 ETNSLLSDIDKTEDSDDTVTLTTIHSAKGLEYKVVFIIGMDEGIFPSERSIKERDDGLEE 590 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL---------------PEE 639 ERRL YV +TRA +KL ++ ++ +YGK +R S F+ E+ EE Sbjct: 591 ERRLFYVAITRAKEKLFISSTKSMTMYGKLNLYRVSSFVDEIINYVDDKSINLEFNFDEE 650 Query: 640 CVEEVRLRATVSRPVSHQRMGTP------------------MVENDSGYKLGQRVRHAKF 681 V ++R S + + YK+G+++ H K+ Sbjct: 651 RVTTSKIRNDAYTDYSRTYVPNADLGRTKLDKPLNHYQKPNKTSSKDVYKVGEKIIHEKY 710 Query: 682 GEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 GEGT++ E +G L VAF G+GIK Sbjct: 711 GEGTVIKCEKAGTKVMLMVAFDGEGIKLFDIK 742 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 738 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 248/642 (38%), Positives = 351/642 (54%), Gaps = 14/642 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LLD L Q AV LLVLAG GSGKTRV+ RIA L+ P I+A+TF Sbjct: 1 MTQLLDDLTPSQAAAVEHFEGPLLVLAGPGSGKTRVVTRRIARLIE-RRVHPAEILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM R+ L+ + V TFH R+LR + L +F ILD +DQ Sbjct: 60 TNKAAREMAERVEHLIPG--RRVAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAA 117 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAY 177 LK +K D + P + W I K+E + P + G ++ K Y Y Sbjct: 118 LKEAVKEEGFDPTHYSPSRIGWRIGQLKNECISPGMFAQQAGERVGTHLDSVVAKAYGRY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ A VDF +LLL + P++ Q ER+ ILVDE+QDTN QY + L+ Sbjct: 178 QQILLDANAVDFDDLLLHVVTILKENPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALS 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + GD DQSIYGWRGAQ+ENI RF DFP + +RLE N+RST IL+AA+ LI Sbjct: 238 QNEPNLCATGDPDQSIYGWRGAQIENILRFERDFPRVKMVRLEDNFRSTPEILAAADDLI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRS 356 +N R K L T G P+ + + EA + I+ +G ++ AI YR Sbjct: 298 RHNTQRKAKSLRTSNPSGLPVEIRQYADGFQEADSLAAEIRERVASGERQYSDFAIFYRV 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N+ SR +E AL +A +P+ I GG+ F+ER E+KD ++YLR+I N +D AF R+VNTP R Sbjct: 358 NSLSRSIETALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPVR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG + + + + + R L LW A ++ L +A +L+ F L+D LA+ + P Sbjct: 418 GIGKNSQEKLDRWASARNLNLWDAVHQIDASIGLPKKAEYSLKLFANLLDELARRSHG-P 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + + +++ +G + E+ R N+EELV + RQF + + L FL Sbjct: 477 IAELLEVIVERTGYLQNLSGLEPEEYANRKANVEELVASARQFDQDHVEGG--SLSEFLE 534 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEE 594 +L D VQLMTLHSAKGLEFP V++VG+E G+ P + SL EG ++EE Sbjct: 535 TCSLVQDADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLREGDPLQIEE 594 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 ERRL +VG+TRA ++L LT+ R +G+ + S+F+ EL Sbjct: 595 ERRLLFVGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTEL 636 Score = 48.3 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLESV 720 ++LG +VRH ++G G +V + + ++V F+ K + ++A L+ + Sbjct: 792 RFQLGMQVRHPEYGRGLVVGLSLANNRPTVRVEFESSHEEKDFIISHAPLQPL 844 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 737 bits (1902), Expect = 0.0, Method: Composition-based stats. Identities = 272/853 (31%), Positives = 395/853 (46%), Gaps = 144/853 (16%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ LN +QREAV +L+LAGAGSGKTRV+ +RIA+L+ SP SI+A+TFTN Sbjct: 2 QFLEKLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQILDSED 118 KAAAEM+ R+ L+G + TFH R+LR +DF I D D Sbjct: 62 KAAAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDESD 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAY 177 Q L+K +K + +D+KQ R + I+ K+ L P + G+P + ++Y+ Y Sbjct: 122 QQSLVKSAMKRLGIDDKQLTVRNVLSRISHAKNHLLDPQEVYLQSGDPKVERIAQIYKVY 181 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + +A +DF +LLL ++L + + Y RF +L+DE+QDTN QY +R LA Sbjct: 182 ESELAKANALDFDDLLLMTNKLLKTSTEVRERYNRRFQYVLIDEYQDTNRPQYEIMRALA 241 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V VGD+DQSIY WRGA + NI F DFP A+ +RLEQNYRST NIL AA+A++ Sbjct: 242 GTLHNVCAVGDEDQSIYSWRGADIRNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVV 301 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW----QDNGGALAECAIL 353 +NN R GK LWT+ G + Y A + +E+ FV + I + D A+L Sbjct: 302 KNNLKRKGKNLWTERMGGAKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVL 361 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSY-------------LRLIAN 400 YR+N+QSR+ EEA+ + + Y + GG F+ER EIKD +SY LR I Sbjct: 362 YRTNSQSRLFEEAMRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINT 421 Query: 401 RNDDAA-----------------------------------------FERVVNTPTRGIG 419 F ++ + Sbjct: 422 PTRGIGKTTVEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAMLY 481 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALA-------GRAASALQRFM---------- 462 + + + +T++ + A + ++ L G + F Sbjct: 482 GKFEERLVETAQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEA 541 Query: 463 --ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 E ++ + + +I +G E E + RIENL ELV A Sbjct: 542 APEKVEGFRSPGENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAA---- 597 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 + + + FL HAAL A + V LMT+H+AKGLEFP VFIVGMEEG+F Sbjct: 598 -MDSRDRGETIADFLDHAALVADTDDIEAGA-QVTLMTMHAAKGLEFPLVFIVGMEEGLF 655 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY--HRPSRFIGELPE 638 PS +L +EEERRL YVG+TRAM+ L L+ A RR YG ++ SRF+ E+P Sbjct: 656 PSSRTLMNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPP 715 Query: 639 ECVEEV---RLRATVSRPVSHQRMGTPMVENDSG-------------------------- 669 + E++ + + V S+ E+ Sbjct: 716 QLFEDIGSPQKKTPVFGDDSYSTHYDYENEDQRPQYGRTKQKTSYGGGSTYNSIDNIAEF 775 Query: 670 -----------------------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 ++ GQ+V+H K+GEGT+ EG GE +++ V F G Sbjct: 776 FASRGKKFNRPSVPMEEPHGKRGFRPGQKVKHPKYGEGTVYQREGEGEEAKITVQFPRFG 835 Query: 707 IKWLVAAYARLES 719 +K LV +A+LE Sbjct: 836 LKKLVEKFAQLEK 848 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 735 bits (1897), Expect = 0.0, Method: Composition-based stats. Identities = 266/720 (36%), Positives = 391/720 (54%), Gaps = 24/720 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SLN +Q+EAV L V+AGAGSGKTRVL RIA+LM + P I+A+TFTNKA Sbjct: 4 IQSLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM R+ LM V T H L R+LR P+ F ILD EDQ +LK Sbjct: 64 AREMETRVLSLMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKAILKEY 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN--PVEQTWQKVYQAYQEACDRA 184 K ++D+ + A+ YI++ K E + + +E+ K+Y+ Y Sbjct: 124 YKEHSVDKNEISFASALSYISNNKTENVSVEEANKIADFSSLEKKKVKIYEYYLHRQKEL 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L L+ +LQ +++ F ILVDEFQD + IQY I+ L G ++ Sbjct: 184 FALDFDDLILWTVRLFDRFEVVLQKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDNSLL 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WRGA V I F DF +TI L QNYRSTS+IL AN++I+NN R+ Sbjct: 244 VVGDPDQTIYTWRGADVRIIVNFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRV 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+L+TD E I + A ++ +A ++ +K+ + G +E A+LYR+N SR LE Sbjct: 304 DKELFTDNQSKEKIYHFSAGSDEYQAAWIAQEMKSIRLKTGTYSEMAVLYRANYLSRALE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +AL+ +PY IYGG+RFFERQ +KDALSYLRLI DD + RV+N P RG+G +T++ Sbjct: 364 KALMDERIPYIIYGGLRFFERQVVKDALSYLRLIVV-GDDLSLTRVLNRPKRGLGLKTVE 422 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA--QETADMPLHVQTD 482 ++ +R+ + ++ ++ E+ G+ +++F++ ++ Q+ + L + Sbjct: 423 MIAHRARELNCSQFELLQK---EELFKGKTQDTIRQFVQRVERWRSLQQKGGLELFDFFE 479 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 V+ +SG R E EK + +L+ L+ R FS + L+ +L AL Sbjct: 480 LVMDESGYRAFLEAEKDTDN---LGHLKSLMEDIRDFSRYHPE---ATLEEYLQSVALYG 533 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRLAYV 601 + + D VQLMT+H++KGLEF VF+ + EG+FPS+ SL EG +EEERRLAYV Sbjct: 534 DKEEL-VENDFVQLMTVHASKGLEFDTVFVSDLNEGIFPSERSLQEGYHGVEEERRLAYV 592 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL--RATVSRPVSHQRM 659 TRA + L LT A + V PSRFI E+ + +E + + + Sbjct: 593 AFTRARKHLYLTDAGGYSFMLQRVK-TPSRFIDEIEDLYIEHRGVVKSQEKQESSFYSQF 651 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLE 718 V +K G + H KFGEG ++ EG + VAF G K L A++ L Sbjct: 652 MEKPVREVKKWKKGDIIEHVKFGEGVVILQEGE----FVTVAFAYPFGTKRLQASHPSLT 707 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 734 bits (1895), Expect = 0.0, Method: Composition-based stats. Identities = 238/675 (35%), Positives = 371/675 (54%), Gaps = 15/675 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ +L LN +Q A +LVLAGAG+GKTRV+ RIA++++ P I+ + Sbjct: 1 MEKDEILKQLNPEQASAAGTVNGPVLVLAGAGTGKTRVITFRIAYMLAC-GIPPQMILGM 59 Query: 61 TFTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+ QL+ + +GTFH ++LR F I D DQ Sbjct: 60 TFTNKAAREMRERLAQLVQPQIARKVTLGTFHSFCIKILRRDIAKLGYLPSFTIADESDQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQ 178 +LK+ + + + +P + I K++ P + + + E T ++Y+ YQ Sbjct: 120 QGVLKQAAGQLGCNYEGFPLGEVQSMIGRWKNKLFFPEDARRHADTTFEATAAQLYEEYQ 179 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF ++LL + L+ P +L+ YRE + +L+DE+QDTN Q+ ++LL G Sbjct: 180 TLLEMQNSLDFDDMLLLVYRLFTEHPDVLERYRETYQYLLIDEYQDTNAAQFTIVKLLTG 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D + +VGDDDQSIY WRGA + NI F + FPGA+ ++LEQNYRST++IL+AAN +I Sbjct: 240 DRCNLCVVGDDDQSIYSWRGADISNILGFPDHFPGAKVVKLEQNYRSTTSILNAANVVIG 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRS 356 +N R K+LW++ DGEP+ + N EA F+ + I +++ + AILYRS Sbjct: 300 SNANRHEKQLWSNLGDGEPVKIVTTENGESEAEFIGSMITQMKNDKPELRYQDFAILYRS 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N SR LE+ L + +PYR+ GG FF+R+EIKDA++YL+L+ N DD + R++ TP R Sbjct: 360 NHLSRQLEQTLRRQQIPYRLVGGQEFFKRREIKDAVAYLKLLVNPCDDQSLLRILGTPPR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-M 475 G+ + +D ++ R + +++ E +K L +AA+A + F E+ + A+ Sbjct: 420 GLAQKAVDSLKTGRRAKHKPMFELLAEEEFQKELTPKAAAAAREFAEVYAKYKERFAEPG 479 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 L + +K+ G ++ + R EN++E +TA Q+ + + L+A Sbjct: 480 ALAWKITEFLKEIGYLDGLQRIYKDLKDAMKRRENVDEFITAITQYEERQAEPP--TLEA 537 Query: 534 FLSHAALEAGEGQADTWQ---DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 +L + AL + + DAV LMT+H++KGLEFP VF+V ME +FP + +L+EG Sbjct: 538 YLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEFPVVFVVAMERNIFPHERALEEGS 597 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEE RL YV +TRA + L L A+ R G PS F+ L +E V E + Sbjct: 598 -VEEELRLFYVAITRARKYLYLLRAKERMQRGITRATLPSPFLHLLTDE-VAERTTPEEL 655 Query: 651 SRPVSHQRMGTPMVE 665 RP S + Sbjct: 656 LRPASEDEVRQAFAN 670 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 235/647 (36%), Positives = 363/647 (56%), Gaps = 18/647 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++QR+AV LL LAGAGSGKTRV+ RIA+L+ P I+AVTFTNKAAAE Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIK-HGVLPSQILAVTFTNKAAAE 63 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR RI +L+ + V TFH R+L+ +F I S D L++ +++ Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLIRNILRE 123 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 + ++ + WYI+ K+ ++P+ ++ + + +E+ ++VY+ YQ VDF Sbjct: 124 IKINTLNYDENLFAWYIDRFKNNLMKPYEVEPHDD-LEKIAKRVYEVYQSYLKGYNAVDF 182 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +L+ +L++ P +L Y+ERF I+VDE+QDTN QY LLA + +VGDD Sbjct: 183 NDLINLTIDLYVEFPEVLNKYQERFRYIMVDEYQDTNFAQYKLTTLLASKYRNIAVVGDD 242 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIY +RGA V NI F N++P A+ + L +NYRST IL AA+++I NN R KK+ Sbjct: 243 DQSIYAFRGADVSNILSFENEYPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVV 302 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVLEEALL 368 +G +G P ++ +E +EA+FV + I + + A+L+R NAQSR+ EEA Sbjct: 303 AEGEEGIPPTIMPCEDEREEAQFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFR 362 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 +PY + G +F+ER+EIKD L+YL L N D+ + RV+N P RGIG ++ + + Sbjct: 363 LRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNLNE 422 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-------AQETADMPLHVQT 481 S ++L++ ++ +A + ++ F+E+ID L+ Sbjct: 423 ASIKNGVSLYETLLNYESMDDISPKAKAGIKDFLEVIDHYHNLFTVDKNALERPKLYENI 482 Query: 482 DRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++ + + E+G ++EN+E L+ ++ + ++ L+ +L Sbjct: 483 NKFLDVIAYHNEILNSSDTKEQGAKKMENVESLMNGILEYEKSNKN---ATLKNYLDRIL 539 Query: 540 LEAGEGQADTW--QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + E Q D + + LM++H+AKGLEFP V+I GME+G+ P Q SLDE G LEEERR Sbjct: 540 LMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKSLDENG-LEEERR 598 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 L YV +TRA + LTLTY +R GK+V PS F+ E+ EE+ Sbjct: 599 LCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLPEEM 645 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 244/663 (36%), Positives = 361/663 (54%), Gaps = 9/663 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + L Q EAV LL++AG GSGKTRV+ HRIA+++ P+ I A+TF Sbjct: 1 MDAITKDLTAAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAYML-QSGIRPWQIAALTF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ L +W+GTFH + LR + L +++ I DS D Sbjct: 60 TNKAADEMRSRVNLLAPN--QPVWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSKSA 117 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEAC 181 +KR I A + P Q I++ K+ + P Q G + KVY YQ+ Sbjct: 118 MKRAITAAGVSTSHTSPEQIASAISNAKNRLITPEIMAQQTGRAGDTVAAKVYPVYQQQL 177 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 A VDF +LL L P + + E+ I+VDE+QDTN QYA +R L+ D Sbjct: 178 LTANAVDFDDLLFHFARLLRENPEVRSNLDEKLKYIMVDEYQDTNLAQYAIVRALSVDHP 237 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + + GD DQS+YGWRGA + NI F D+P +T+RLEQNYRST IL A+ LI +N Sbjct: 238 NLAVTGDPDQSVYGWRGADLNNILDFEKDYPAVKTVRLEQNYRSTPEILRVADQLIRHNR 297 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQS 360 R K L+TD GE ++L + EA + + I G A + AI+ R NA + Sbjct: 298 RRKQKNLFTDNPTGEAVTLRQYEDGYKEADGIADEIANQMIAGNAEPRDFAIMCRMNALT 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +E AL +PY+I G+ F++R+EIKD L+YL LI N D AF+RV+NTPTRGIG Sbjct: 358 RSIEHALRNRGIPYQIVNGLEFYQRKEIKDLLAYLHLINNPRHDVAFQRVINTPTRGIGA 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +TL+ +++ + D ++ + +A R + + L+ RA + + F+ L D L A L Sbjct: 418 KTLERIQRFADDHRIPMLEAARRVDEIDTLSKRAKTLVTSFIRLYDRLC-IKATATLEDL 476 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTR-IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +I++ E+ E+ I N++E ++A +F ++ L+AFL A Sbjct: 477 LRFLIEEIKFVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPEDG--SLEAFLEQVA 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + + + V LMTLH+AKGLEFP+VFI+ +E+ + P + S ++ +LEEERRL Sbjct: 535 LVSDTDAFEDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKEDETQLEEERRLL 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 +VGVTRA Q L ++YA+ R G+ PS F+GELP + ++ V ++ + + Sbjct: 595 FVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGELPRDEMQVVEVKGSRNFFDDAYDD 654 Query: 660 GTP 662 P Sbjct: 655 EYP 657 Score = 49.4 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y+ G VRH+++GEGTIV + G G ++ F+ A+A++E V Sbjct: 736 YREGSTVRHSEYGEGTIVALTGKGPKRTAKIQFEETEE-TFRLAFAKIELV 785 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 730 bits (1886), Expect = 0.0, Method: Composition-based stats. Identities = 252/634 (39%), Positives = 376/634 (59%), Gaps = 21/634 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+QR AV +L+LAGAG+GKT+ LVHRIA L+ P IMAVTF NKAA Sbjct: 15 NLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMAVTFANKAAN 74 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ +++G + W+GTFH A ++LR DF ILD +DQ+R+L+++ + Sbjct: 75 EMIQRVNEIVGEMKFH-WIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQVRMLQKVAQ 133 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQEACDRAG 185 ++ + ++ + I++ KD+ P ++ + E+ VY YQ+ Sbjct: 134 EKKIEADKALLKKYLSVISAWKDKAFTPSRVRFNNAANTWFEKQALSVYDTYQKKLKENN 193 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DF +LL+ L+ L+ Y+E+F I+VDE+QDTN QY W+RLLA + Sbjct: 194 SMDFGDLLMHNVTLFNKDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICC 253 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA+V NI RF DF GA+ I+LEQNYRST+ IL+AA+ +I+NN RL Sbjct: 254 VGDDDQSIYGWRGAEVGNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLT 313 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 KKLWT GE I ++ + EAR ++ IK + ++ AIL R+ Q+R EE Sbjct: 314 KKLWTAYPGGEEIQIFTYMDSEQEARAIIRMIKE-RKLLCRYSDTAILVRAGFQTRAFEE 372 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 A + ++PYR+ GG++F+ER+EI+D ++YLRL+ N ND+ AFER++NTP RG+G +L+ Sbjct: 373 AAIHENVPYRVVGGLKFYERKEIRDIIAYLRLVVNPNDNLAFERIINTPKRGLGQASLNK 432 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + S + ++++A R+L + + L +AL F++ + +E+ + LH ++ Sbjct: 433 IYNYSLEEGCSMFEAVRKLEENEKLKS---TALLTFVKQVRKWQEESLNHSLHDLLKKIT 489 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 +SG + + E+ +TRIEN++EL ++F FL H +L Sbjct: 490 LESGYISALK----EQDETRIENVDELFRVIQEFDDAT---------DFLQHVSLLTESD 536 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 DAV +MTLH++KGLEF QVF+ G E+G FP SL ++EEERRLAYVG+TR Sbjct: 537 AQINNSDAVNMMTLHASKGLEFEQVFLPGWEDGTFPHVRSLCSTEQIEEERRLAYVGITR 596 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 A + LT+T A R + SRF+ EL E+ Sbjct: 597 AKRFLTITSAHRRLIRNSWQNTVKSRFMLELAEK 630 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 245/661 (37%), Positives = 359/661 (54%), Gaps = 9/661 (1%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN--CSPYSIMAVTFTN 64 L LN QREAV LLVLAGAGSGKTRV+ HRI L++ +I+AVTFTN Sbjct: 3 LSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLLNERPGLIMARNILAVTFTN 62 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ R+ + G G+ V TFH +LR P+ F I D DQL ++ Sbjct: 63 KAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGDQLANIR 122 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDR 183 R ++ +D++ + R+ + I+ K+ G P + G+ + VY YQ + Sbjct: 123 RAMREHKIDDRSFDARKVLNLISKAKNSGKAPEPKPEGIGDDYDLITHMVYPDYQLSLKA 182 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 G VDF +LLL L P + + Y +RF +LVDEFQDTN Q ++LLAG + V Sbjct: 183 QGSVDFDDLLLLPARLLREHPDLYEKYTKRFRYLLVDEFQDTNTAQLELLKLLAGRSRNV 242 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQ IY WRGA+V NI F FPG + +RLEQNYRS +L AANA+I N R Sbjct: 243 CAVGDDDQCIYSWRGAEVRNILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVIAKNPER 302 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K++WTD G + + N+ +EARFV + I+ G + + A+LYR+N QSR + Sbjct: 303 KAKQMWTDRTGGTKVKVVTCPNDEEEARFVAHEIQKHMALGISADDIAVLYRTNGQSRPI 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE L + ++ Y + GG FF+R+E+KD ++Y ++I N+ D+ + R+VN P+RGIGD T+ Sbjct: 363 EETLREKNIGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVPSRGIGDVTM 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + +R +TLW ++ + L A + + F++L++ L T + Sbjct: 423 ERLNVHARGEGVTLWTVMKKATDYEDLPPGAGARVMDFVDLVERYRAAYEHGQLANVTRK 482 Query: 484 VIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 ++++ G R +++ ++ ++ + F E L +L+ +L+ Sbjct: 483 LLEEIGFREATRAHATSATAADKKLKGVDGVLNSLENFEKRE--GPKASLPTYLNRLSLD 540 Query: 542 A--GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 E + V LMT+H++KGLE+ VF +GMEE + P E LEEERRL Sbjct: 541 TRQEEEEVPGANRRVTLMTVHASKGLEYRLVFFIGMEEDLMPHGGMQGEAQNLEEERRLC 600 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRA + L LT A TR GKEV PSRF+ +LP E +E V L A P + + Sbjct: 601 YVGITRAKEVLYLTRAATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAPRQGPPTTEEK 660 Query: 660 G 660 Sbjct: 661 N 661 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 729 bits (1883), Expect = 0.0, Method: Composition-based stats. Identities = 260/648 (40%), Positives = 399/648 (61%), Gaps = 20/648 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + +LN +Q++A LL+LAGAG+GKT+VL RIA ++ P++I+AV Sbjct: 5 MQNQNFMHTLNSEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIQQNLALPHNILAV 64 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQILDSED 118 TFTNKAA EM R+ L+ + G+ +GTFH +A ++LR + L F I+ +D Sbjct: 65 TFTNKAAKEMSERVHNLI--NCYGVNIGTFHSMAAKILRDQIENLNLGLNNKFTIISHDD 122 Query: 119 QLRLLKRLIK-AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN--PVEQTWQKVYQ 175 QL L+K ++K ++D K++ P+ I+ KD+GL P + + P+++ + +Y+ Sbjct: 123 QLTLVKDIVKLKKDIDTKKYTPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLIYE 182 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + ++DF +LLL +EL++ P IL++Y+E++ IL+DE+QDTN QY W R+ Sbjct: 183 EYQKNLLISNVLDFGDLLLYNNELFIKNPEILKYYQEKYRYILIDEYQDTNIAQYLWARM 242 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA + VGDDDQSIYGWRGA+V NI RF DF GA I+LEQNYRST IL+AA+ Sbjct: 243 LASLYRNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASN 302 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILY 354 +I NN R K LWTD A GE I + ++ +EAR++ I ++ AIL Sbjct: 303 VINNNKNRHSKTLWTDSASGEKIKIISCLSDKEEARYIACEIDKLVREERYHAGNIAILV 362 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+ Q+R EEA + ++MPY+I GG+RF+ER EI+D L+Y+R+ N+ND+ A ER++N P Sbjct: 363 RAGFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVP 422 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 R IG +L+ +R + +R ++ + A +E+L+ ++ +L+ + ID ++ Sbjct: 423 KRAIGAASLNKIRSYALERNISNFVAIKEILETGIFKAKSYESLKDLLTKIDNWYEKFIT 482 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 ++ DSG +M ++EK E+ RIEN+ E++ A +F + F Sbjct: 483 DTPINVVKTILDDSGYLSMLQEEKTEEAFGRIENINEMLRAIAEF---------NDIHDF 533 Query: 535 LSHAALEAGEGQADTW-QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-- 591 + H++L +T +V +MTLH+AKGLEF VF+ G EEG+FPSQ SLDE G Sbjct: 534 IEHSSLVMENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKG 593 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 LEEERR+AYVG+TRA + L +T+AE+R+++ + V+ PSRFI E+P+E Sbjct: 594 LEEERRIAYVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPDE 641 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 237/646 (36%), Positives = 388/646 (60%), Gaps = 13/646 (2%) Query: 6 LLDSLNDKQREAV-AAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN Q+EAV ++ LV+AGAGSGKTRVL R+ +++ P I+ VTFTN Sbjct: 18 LLDGLNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILEN-GIDPRRILTVTFTN 76 Query: 65 KAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RIG +G ++ + +GTFH LA R L ++ +A L +++ I DSED +++ Sbjct: 77 KAATEMKERIGNEVGEARAKKIMIGTFHSLAVRWLHQYYSEAGLKKNWTIFDSEDTNKVI 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 K L+K+ N+D+ + I++ K++ + P + P ++++ ++Y+ YQ+ R Sbjct: 137 KELLKSNNMDDSKQNVYATQSRISNLKNDMILPKDFRKQMEPQDKSFARIYERYQDRMAR 196 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +L+++ L + + + ++ R+ I+ DE+QDTN QY I+ + GD + Sbjct: 197 NNAVDFDDLIMKMVILLESNTEVRRKFQRRYKYIMCDEYQDTNECQYRMIKNIVGDKNNI 256 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDD Q IYGWRGA +E I F D+PG + ++LEQNYRST+ I++A NA++++N + Sbjct: 257 FVVGDDYQGIYGWRGANIEKILNFQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQ 316 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRV 362 + K +TD GE I Y A ++ EARF+ I+ +G + A+LYR+N QSR+ Sbjct: 317 MNKTCFTDKGMGEKIRKYEAPDDEQEARFIAQEIQNLCTFDGYKYEDIALLYRTNVQSRL 376 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE+ ++ ++PY + G F+ER+EIKD +S+++L N ++D A +R++N G+G T Sbjct: 377 LEDQFIRHNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIACDRILNMQA-GVGKTT 435 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL---AQETADMPLHV 479 + ++ + ++ ++++ + A A A L + ++AL + +D P+ Sbjct: 436 IKQIKDKANEKNKSIYEVVEYFNPKTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITD 495 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + + K + ++ E+ RI+N++EL + + +D LQ FL A Sbjct: 496 MLELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAKGYEQENKDPH---LQDFLDQIA 552 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L++ + + QD VQLMTLH++KGLE+P VF++GMEEG+FP SL + +LEEERRLA Sbjct: 553 LQSQQDKV-VNQDKVQLMTLHTSKGLEYPVVFMIGMEEGLFPHSRSLSDTVQLEEERRLA 611 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKE-VYHRPSRFIGELPEECVEEV 644 YVG+TRA + L T+AE R Y + + PSRF+ ELP+E ++EV Sbjct: 612 YVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEELPDELIQEV 657 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 726 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 253/641 (39%), Positives = 366/641 (57%), Gaps = 8/641 (1%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LLDSL D QR AV LL+LAG GSGKTRV+ HR+AW+++ I+A+TFT Sbjct: 20 SPLLDSLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVAWMLAS-GIPARQILALTFT 78 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ +L +W+GTFH R+LR++ L ++F I D++D ++L Sbjct: 79 NKAADEMRGRLERLAPRQA--VWMGTFHRFCARMLRSYAELVGLRENFSIYDTDDSRKIL 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACD 182 + + +D P I+ K+ + + G+ + +KVY YQ+ Sbjct: 137 QIALDEEGIDLTHTSPDAIAQAISWAKNNLVTADRYEPRRGHAIGGIVEKVYPTYQKLML 196 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 R+ VDF +LL+ L P + + ER+ I+VDE+QDTN QY +R L+ D Sbjct: 197 RSSAVDFDDLLVHVAILLKENPEVRRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHPN 256 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + + GD DQSIYGWRGA + NI F D+P + +RLEQNYRST +IL A+ LI +N Sbjct: 257 LAVTGDPDQSIYGWRGANLSNILEFEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIR 316 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSR 361 R K L+TD G + L + DEA + I G + AI YR+NA SR Sbjct: 317 RKEKDLFTDNPQGNRVRLATFPTQRDEAETIAEEIAHEVRTGKRRPRDFAIFYRTNALSR 376 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E AL + +PY+I G+ F++R+EIKD L+YL+L+ N DAA R++NTPTRGIG Sbjct: 377 QIEHALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTPTRGIGKS 436 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T+ +++ +RDR + L A R LA ++A A+ +F+ ++D L A P+ Sbjct: 437 TIAKIQEVARDRAIPLLDAARMAGTISGLAKKSAVAVAKFVAMLD-LIGTKATAPVEELV 495 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 V+ ++G R + E + E+ R+ NLEEL+TA +F L+ FL ++L Sbjct: 496 GYVLTETGYREVLENSEAEEDHERLANLEELLTAASEFDLRNPGG--AGLEQFLEDSSLV 553 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 A ++ D V +MTLH+AKGLEFP V+IV EEG+ P + S + +LEEERRL +V Sbjct: 554 ADTDAFESDSDKVTMMTLHAAKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLLFV 613 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G+TRAMQ LTLT+A+ R G++ S F+ ELP +E Sbjct: 614 GITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMELPRHEME 654 Score = 44.4 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QGQGIKWLVAAYARLESV 720 + +K G V+H ++G G IV + G+G V F +G + V +++L + Sbjct: 743 SPYAFKHGMMVQHPEYGPGQIVALSGNGAKRVANVRFMEGGEERKFVIVHSKLTPL 798 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 725 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 267/777 (34%), Positives = 406/777 (52%), Gaps = 65/777 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN+ QR AV LV+AGAGSGKTRV+ +++A L+ + +P + A+TFTNKA Sbjct: 4 LTALNEAQRVAVVYNEGPALVIAGAGSGKTRVITYKLAHLVD-QGWNPQRLYALTFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++G + +GTFH + R+LR + QD+ I D+ D L++ Sbjct: 63 AGEMRSRVSEMLGEGIAYRLRMGTFHSICGRILRRYAPLLGYSQDYSIYDTSDTKALIRN 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH------HIQSYGNP-VEQTWQKVYQAYQ 178 IK ++L +K + P + + I+ K+ + P I+ Y E K+Y Y Sbjct: 123 CIKELDLSDKSYTPTRVLKRISDAKNMLISPQAYAANQEIRKYDTMNQEGELYKLYSLYT 182 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C + +DF +LL + L + P Q + +L+DE+QDTN Q+ R L Sbjct: 183 QRCKESNSMDFDDLLFLLNVLIRDFPEAHQEIKSGIDFLLIDEYQDTNTSQFELARHLVA 242 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D ++ VGDD QSIY +RGA++ NI F F GA+ +LEQNYRST +I+S+ANALIE Sbjct: 243 DHNRIFAVGDDAQSIYSFRGARIANILSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIE 302 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSN 357 +N R+ K+++TD +GE + LY + +EA +++ I D L++ ILYR+N Sbjct: 303 HNQQRIPKEVYTDLGEGEKLQLYHYTSSDEEATRLIDIITQRHDEEQIPLSDQTILYRTN 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR EE LL +PY IYGGM F+ R EIKDA++YL+LI N +++ A R + P +G Sbjct: 363 AQSRKFEEVLLSEGIPYVIYGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYPRKG 422 Query: 418 IGDRTLDVVRQTSRDR--QLTLWQACRELLQEK---ALAGRAASALQRFMELIDALAQET 472 IGD+T++ V ++ QL+L+ A + L+ + + F+ LID+LA Sbjct: 423 IGDKTIEKVALYAQQHSPQLSLYDALCAAIDSADPVGLSRGVRNKIASFVNLIDSLASAY 482 Query: 473 ADMP-LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL--- 528 L ++++SG+ +E + Q +++NL+E +++ +F + L Sbjct: 483 QHYAKLEEWIAHILRESGIVAELTREDTVESQAKLDNLKEFISSASEFEARYRQDPLNLF 542 Query: 529 -------MPLQAFLSHAALEAGEGQADTW-------QDAVQLMTLHSAKGLEFPQVFIVG 574 L AF L + Q + QD +QLMT+H AKGLEFP V+I G Sbjct: 543 AEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGVALQDRLQLMTIHVAKGLEFPYVYIAG 602 Query: 575 MEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG 634 +EE + PS SLD +EEERRL YVG+TRA + TL+Y R GK PSRFI Sbjct: 603 VEENLLPSSRSLDTAEMIEEERRLLYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIA 662 Query: 635 ELPEECV----------EEVRLRATVSRPVSHQRMGTPM--------------------- 663 ELP VR A +P ++ + T Sbjct: 663 ELPRAHYTLHEEAAPIGTSVRSYANSYQPTTNSQRPTATSPSASSATAQQMLAKSSPVNA 722 Query: 664 VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +E+ GY +G RVRH + G+G I +E S +L + F + ++ Y L+ + Sbjct: 723 LESLDGYHVGDRVRHPRHGDGEIQRIE-SAMGGKLTIHFDDGKTREVLIRYTHLDHI 778 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 724 bits (1870), Expect = 0.0, Method: Composition-based stats. Identities = 250/645 (38%), Positives = 371/645 (57%), Gaps = 17/645 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L SLN++Q+EAV +L+LAGAG+GKTR + R+ +++ P I+AVTFT Sbjct: 31 ESFLLSLNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFT 90 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM R+ +++ G+W+GTFH +A R+LR++ L +DF ++ +DQL+L+ Sbjct: 91 NKAAREMLVRVSEIV--DTTGIWLGTFHAIAARILRSNAERVGLRRDFTVIGPDDQLQLI 148 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACD 182 K ++ ++ M I K++GL P + + + VY YQE Sbjct: 149 KAIVNDTQPGHPAEECKKMMHAIQRWKEKGLLPAGVTDTELQKCPNIVRDVYYEYQERLK 208 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 DF +LLL ++ +L HY+E+F ++VDE+QD N +QY W+RL+ Sbjct: 209 ALNCADFGDLLLYNVSMFSAHADVLSHYQEQFKYVMVDEYQDINTVQYLWLRLIVQKRKN 268 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDDDQSIY WRGA+V NI RF +DFP A+ +RLE NYRSTSNIL AA+A+I NN Sbjct: 269 ICCVGDDDQSIYSWRGAEVGNILRFADDFPEAKIVRLECNYRSTSNILCAASAIINNNKS 328 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RLGKKLWT G+ + L ++ EA+F+ IK + E AIL R+ Q+RV Sbjct: 329 RLGKKLWTTNHAGQKVGLMKFWDGRMEAQFISEYIKGSSE--YRFDETAILVRAGFQTRV 386 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 EE L++ +PY+I G +F++RQEIKD ++YLR++ N +D AFER+VN P R +G T Sbjct: 387 FEEYLVRCGIPYKIIGSTKFYDRQEIKDLVAYLRVVTNPKNDIAFERIVNKPKRQLGAST 446 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + +R +RD +L+L ++ +++ L R ++ LQ ++ + L Sbjct: 447 VAKMRAYARDNRLSLLESGESMIRFGLLPERTSNTLQNLLDKFKCWRETLDTTSLTTVMQ 506 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + + SG M + E G+ G ++IEN+ EL A F + FL H +L Sbjct: 507 AIAEGSGYMNMLKDE-GDAGASKIENIRELFAAVGNFENATK---------FLEHISLVT 556 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLEEERRLAY 600 + + V LMTLH+AKGLEFP VF+ G EEG+FP + S+ + G LEEERRLAY Sbjct: 557 EVDSPEQANNHVYLMTLHAAKGLEFPLVFLPGWEEGVFPHEKSIHDSTGNALEEERRLAY 616 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 VG+TRA ++L ++ R + + SRFI ELP E V+ ++ Sbjct: 617 VGMTRAREQLFISCVAVREVNNWRQPMKISRFIKELPAEHVQVLK 661 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 252/669 (37%), Positives = 368/669 (55%), Gaps = 24/669 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN QREAV +LVLAGAGSGKTRV+ +RI L+ P +I A+TFTN+A Sbjct: 6 LAKLNTPQREAVLHGSGPVLVLAGAGSGKTRVITYRIVRLLRS-GIPPQAIAALTFTNRA 64 Query: 67 AAEMRHRIGQLMGTSQGG--MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 A EMR R+ L+G + + +GTFH L R+LR+ H P+ F I D+ DQL +++ Sbjct: 65 AEEMRERVAALLGDRKTASMLTMGTFHSLGLRILRSEHEAMGYPRGFVIYDTSDQLGVVR 124 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDR 183 L++ ++ +++ R + I+ K+ + P + + ++ +VY YQEA Sbjct: 125 ELLRGIDAG-RRFDVRAILTRISLAKNAFVFPEEYVPNGDDEYDEITAEVYPRYQEALRA 183 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +LL ++ + + ++E+F ++VDE+QDTN Q +++ L + + Sbjct: 184 YAAVDFDDLLTATVRMFDQRDDVRARWQEKFRFVMVDEYQDTNRAQLKFVKTLVAEHENL 243 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA NI F FPGA I+LEQNYRST IL AANA+I NN R Sbjct: 244 CVVGDDDQSIYSWRGADPTNILHFDRMFPGARVIKLEQNYRSTPTILRAANAVIANNVNR 303 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRV 362 GK LW+D ADG I A + EARFV I + + A+LYRSN QSR+ Sbjct: 304 HGKNLWSDIADGAKIVHASATDTESEARFVAREIGDIVGTDNLRYRDVAVLYRSNIQSRL 363 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +EE+L AS+PY +YGG +F+ER+E+KD ++YLRL N+ D+ A RV+N P RGIG T Sbjct: 364 IEESLRSASIPYVMYGGQQFYERKEVKDLIAYLRLALNQRDEIALRRVINYPARGIGATT 423 Query: 423 LDVVRQTSRDRQLTLWQACR---ELLQEKALAGRAASALQRFMELIDALAQETADMP-LH 478 L V +R + ++W+ ++ + + A++ F+ +I+ + Sbjct: 424 LKRVEDHARASRTSMWRILEGASQMAESDKMRPSTVQAIENFVAIIERTRASLDGGARII 483 Query: 479 VQTDRVIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 T R+I + L Q RI+N+E L+ + + + E+ L L +L Sbjct: 484 DVTRRLIDEIQLYDDLRNASPSAAAAQRRIDNVESLLRSLER--HQEKRPGLGALAEYLR 541 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS----------L 586 +L + + V L TLH AKGLEFP VF++G+EE + P + L Sbjct: 542 RLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPHARTLKPQATDVMDL 601 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 D + EERRLAYVG+TRA +KL LT + R GK + PSRF+ E+P E +EE + Sbjct: 602 DHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPAELLEERDI 661 Query: 647 RATVSRPVS 655 +A PVS Sbjct: 662 QAEERAPVS 670 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 721 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 237/652 (36%), Positives = 369/652 (56%), Gaps = 15/652 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LLD LND+QR+AV LL+LAGAG+GKT V+ RIA+++ P I+AVTF Sbjct: 1 MSVLLDRLNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R G+L+G +WV TFH ++LR + A DF + + DQ+ Sbjct: 61 TNKAANEMKERAGRLIGQKAVKDLWVSTFHSFGMKILRKYAYQAGYAPDFTLAEYGDQVG 120 Query: 122 LLKRLIKAMNL--DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L+K+ + + L D P+ + I+ K + P ++ +P EQ +Y+ YQE Sbjct: 121 LIKQGLNELGLVEDGMSQDPKAILSLISMAKAKNQVPEDLEESSDPWEQRIGGIYRYYQE 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 ++DF +LL+ L + Q +++F ++VDEFQDTN+IQ + L Sbjct: 181 YLHALNILDFDDLLMLTVRLLQKDEKVRQLLQDKFKYVMVDEFQDTNHIQMELLHALLPK 240 Query: 240 T-GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY WRGA+V NI F FPG + I+LEQNYRS + IL+AAN +I Sbjct: 241 HEPNICVVGDDDQSIYSWRGAEVANILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVIS 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSN 357 N+ R K LW+ GE + + +E EA+ + + I + +CAILYRSN Sbjct: 301 INSQRHVKNLWSAQEGGEKLKVVACGSEEREAKAIADTILNKVNGRQNTYGDCAILYRSN 360 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 QSR LE+A+ + +PY+I G F+ER+E++DAL++L++I N DD +F RV++ P RG Sbjct: 361 HQSRALEDAMRRGRIPYKIIGDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVPPRG 420 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MP 476 IG RT+ +R+ + + + +++ R + GR++ AL +F ++ Q+ + +P Sbjct: 421 IGPRTIKTLREKAVENKTSVYDLLRNPQFMENF-GRSSDALMKFNNRVEEFRQKFQEKVP 479 Query: 477 LHVQTDRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L ++ + G + E + R +N+ E++ +ED+ +PLQ + Sbjct: 480 LAGLVEQYFEGVGYIEGLGRMYKPREDAEKRYQNVLEIIHTIE--GREKEDKRCIPLQEY 537 Query: 535 LSHAALEAG---EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L +L + D +AV L+T+H++KGLEFP VF+ GME+ +FP + S Sbjct: 538 LESVSLMEEYRRRQEKDEDPNAVMLLTVHASKGLEFPSVFVTGMEKNLFPHEKSAGLKA- 596 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 L EERRL YV +TRA L LT+++ R+ + PS+F+GELP++ V+ Sbjct: 597 LAEERRLFYVALTRAKSDLILTWSKMRKAGRRMSQRMPSQFLGELPKDLVDH 648 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 242/672 (36%), Positives = 359/672 (53%), Gaps = 26/672 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN +Q +AV LL+LAGAG+GKTRV+ R+A+L+S + P I+AVTFTNKA Sbjct: 6 LFDLNPEQEQAVRTTEGPLLILAGAGTGKTRVITMRVAFLIS-QGVDPSHILAVTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++ SQ + + TFH L R+LR ++F I D DQ+ L+K+ Sbjct: 65 ADEMRERLAKMIEPSQAKKVTMSTFHALCVRILRQDIEKLGWKKNFSIYDEGDQMGLIKK 124 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 +I +++ P A I+ K+ G R + + V+ YQ Sbjct: 125 IITRTAAKDEKLDPNVAKNLISKAKNNGWR----EVSPGDEKTLAGAVFARYQAELKTLN 180 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA------GD 239 VDF +LLL A ++ + + RF ++VDEFQDTN +Q + +LA G Sbjct: 181 AVDFDDLLLLAVKVLSEHADVRDRWHRRFRYLMVDEFQDTNRLQLELVSMLAKPAEGTGG 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGDDDQSIYGWRGA+V NI F FP ++LEQNYRST+ IL+ AN LI+N Sbjct: 241 RPNVAVVGDDDQSIYGWRGAEVSNILEFEAHFPDPVVVKLEQNYRSTNAILNTANFLIKN 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 N R KKLW+ DG+ + + ++ EA F+ N I + E AIL+R NA Sbjct: 301 NPRRRPKKLWSSAGDGDKVRIVGMSDDRQEAEFIANEIAQRSVTESAPHEEFAILFRMNA 360 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LE L Q ++PYRI GG FF+R+E+KD L+Y + N +DD + R++NTP RGI Sbjct: 361 QSRLLETNLRQLNIPYRIIGGKSFFDRREVKDLLAYANCLVNTDDDVSLLRIINTPARGI 420 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 T++ S ++ +++ L R +L RF+E++D + + PL Sbjct: 421 SSNTVEKATDFSAKQKCSVFDVLTNEAFRGTLTKRTVESLDRFVEMLDRF-ETKLNTPLS 479 Query: 479 ---VQTDRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 ++K++G ++ + ++ +R NL +L+ + + + L+ Sbjct: 480 DHAAVLREMMKETGYLDELKRTCKTPQEALSRETNLMDLLKSFEDYQGRSSEG----LRG 535 Query: 534 FLSHAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 FL +L E E D V L+TLH+AKGLE+P V+++G+EEG+ P S EG Sbjct: 536 FLDEMSLRQEREEDDDDARGTGVTLITLHAAKGLEYPHVYLIGLEEGLLPHDRSKLEGT- 594 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 ++EERRL YVG+TRA + L L++ R YG + PS FI ELP E + + Sbjct: 595 VDEERRLLYVGITRARRTLALSWCRHRIRYGSPMPCTPSSFIKELPPEWIIHRDATQILQ 654 Query: 652 RPVSHQRMGTPM 663 PVS + Sbjct: 655 APVSEAAAKSKF 666 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 233/671 (34%), Positives = 371/671 (55%), Gaps = 33/671 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +QR A R +L+LAGAG+GKTRV+ RIA ++ +P SI+AVTFTNKA Sbjct: 4 LSTLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMIE-RGVAPGSILAVTFTNKA 62 Query: 67 AAEMRHRIGQLMG--------TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 A EM+ R+ +L+ + TFH L R+LR H ++F I D + Sbjct: 63 AREMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKLGYKKNFVIYDQTE 122 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAY 177 QL +K+++ ++ ++ P + ++ K+ G ++ + + + + Y Sbjct: 123 QLGAIKKILSQVSAKGEKTDPAAILAMLSKYKNGG---SQAAAFADESIKAMAEHIRTRY 179 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + A VDF +L+L L+ P L+ R RF I+VDE+QDTN Q++ + L Sbjct: 180 ESALRACNAVDFDDLILLTLRLFEEHPDALEACRNRFRYIMVDEYQDTNASQFSLVHYLT 239 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + +VGDDDQSIYGWRGA++ N+ FP + ++LEQNYRST+ IL+AANA+I Sbjct: 240 KEHRNLCVVGDDDQSIYGWRGAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVI 299 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRS 356 +NN R GK+LW+D G I+L+ ++ EA+ +V +I+ + ++ AIL+R+ Sbjct: 300 KNNLRRRGKQLWSDKGQGTKITLHTFESDEAEAKAIVEQIEFKRLASRIPWSQQAILFRT 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QSR LE AL Q + Y + GG +F+R+EIKD L+YL+L N NDD + R+ N P R Sbjct: 360 NIQSRALETALRQGQVRYHLIGGQSYFDRREIKDFLAYLKLFINPNDDISLLRIANVPAR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA---QETA 473 G+ D T++ + S +R+ ++++A + + + R +++ F++ ++ Sbjct: 420 GLSDVTMERLLAASHERKCSVYEAMKNPMVTTSFLTRTRESIEEFVKFVEETRAPLSSGQ 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYE--QEKGEKGQTRIENLEELVTATRQFSYNE-------- 523 M L V ++ + ++G ++ E R+ NL++L + ++ Sbjct: 480 SMSLKVWAEKFLTETGYLEELRRSEKTAEAADNRVRNLKDLTGILDEDNHTIVAGPDGTH 539 Query: 524 ----EDEDLMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEG 578 ++ LQ FL L++ + Q +AV L+T+HS KGLEFP V+IVG+E+G Sbjct: 540 QPVLTNDPADRLQTFLEELTLDSERKEEKEAQGEAVTLITMHSCKGLEFPHVYIVGLEDG 599 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 + P S EG L+EERRL YV +TRAMQ LT++Y R+ YG+ + PS F+ ELPE Sbjct: 600 LLPHSRSKVEGT-LDEERRLFYVAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKELPE 658 Query: 639 ECVEEVRLRAT 649 E VE +A Sbjct: 659 ELVELGDEKAK 669 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 718 bits (1854), Expect = 0.0, Method: Composition-based stats. Identities = 252/645 (39%), Positives = 358/645 (55%), Gaps = 12/645 (1%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q+EAV LLVLAGAGSGKT V+ +IA+L+ I+AVTFTNKA Sbjct: 38 MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGIRAQYIVAVTFTNKA 97 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+G L+ G G+ V TFH L ++R H F I D D LL Sbjct: 98 AREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERLGYKPGFSIFDESDIKALLTD 157 Query: 126 LI-KAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDR 183 ++ K + D+ + YI + K++ + P ++ NP EQT VY YQ Sbjct: 158 IMQKEYSGDDG---VDEIKNYIGAWKNDLILPEEALEKARNPREQTAAIVYLHYQRTLRA 214 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +L+L+ +L+ P ILQ ++ R +LVDE+QDTN QY ++LL D + Sbjct: 215 YNAVDFDDLILQPVKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQF 274 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA+ EN+ + DFP + + LEQNYRSTS IL AN LI NN Sbjct: 275 TVVGDDDQSIYAWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHV 334 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRV 362 K+LW++ G+PI + NE EA + I T +E AILYR N Q+++ Sbjct: 335 FEKQLWSEMGHGDPIRVIRCRNEDAEAERIAMEILTLHLRTERPYSEFAILYRGNHQAKL 394 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E L +PYR+ GG FF RQE+KD +SY RL+ N +DD AF RV+N P R IG T Sbjct: 395 MELKLQHHQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVPRREIGSAT 454 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L+ + + R ++++ AC E+ + L R LQRF +D + ++ A+ Sbjct: 455 LEKLGNYATQRNISMYAACDEMGLAEHLDSRFHERLQRFKRWMDGIRRQCAENEPIAVLR 514 Query: 483 RVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDLMPLQAF--LSHA 538 ++ D Q + R+ N+ L+ A + +E+ D+ QA L Sbjct: 515 SMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLR 574 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 + + + + + VQ+MTLH++KGLEFP VFI+GMEE + P + S+ E +EEERRL Sbjct: 575 DMLERQQEEEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSI-EADTVEEERRL 633 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 AYVG+TRA Q L +T+A R+ YG+ + PSRF+ ELP E +E Sbjct: 634 AYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLEW 678 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 717 bits (1852), Expect = 0.0, Method: Composition-based stats. Identities = 249/670 (37%), Positives = 353/670 (52%), Gaps = 25/670 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD S L LND Q+EAV L+LAGAGSGKTRVL +IAWL+ + P+ I+AV Sbjct: 19 MDESAWLKGLNDAQKEAVVYLGKRQLILAGAGSGKTRVLTRKIAWLIDAQRVKPWRILAV 78 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLL---RAHHMDANLPQDFQILDSE 117 TFTNKAA EM R+ +G + G+ V TFH ++L RA P + D Sbjct: 79 TFTNKAAREMLDRLTASLGENLAGLQVRTFHSFGLQMLFRSRAQLEQLGYPPQCVVYDRA 138 Query: 118 DQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAY 177 D L K +++A+NLD +Q+ P + I+ K+ G + +P++ +Y+ Y Sbjct: 139 DSLSAAKAVLEALNLDPEQYTPAWVLETISKAKNSGAGLGAFDN--SPMKSIVGPLYERY 196 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 G DF +L+ EL P + + ++ +LVDE+QD N QY +RLLA Sbjct: 197 DGLLKSRGAWDFDDLIALPLELLTRFPEVKEREQKALDWVLVDEYQDVNAAQYRLMRLLA 256 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + VGD DQSIYGWRGA + I F DFPGA + LEQNYRST IL AAN+LI Sbjct: 257 SGGANLTAVGDPDQSIYGWRGADMSMIMNFERDFPGASVMLLEQNYRSTGGILEAANSLI 316 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 +N R K LWTD G ++ DEA + I+ + +G ++ AILYR N Sbjct: 317 SHNFDRREKNLWTDREQGAKPQVWNCPTSDDEAELITTEIERFLSSGYRASDVAILYRMN 376 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 A SR +EE+LL ++PY++ G FF+R+E++D LSYLRL N D A+ +RV N PTRG Sbjct: 377 ALSRRIEESLLSHNLPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLDRVGNLPTRG 436 Query: 418 IGDRTLDVVRQTSRDRQL----TLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 +G R+LD + + +W A + E L+G+ A+ ++ + + Sbjct: 437 LGPRSLDKLDAYLLSHRTADPADVWAAVAQTGAE--LSGQGAAGARQLAGAMGEILGCGG 494 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 D L D ++ G T+ ++ + R +N+ E+++ D L Sbjct: 495 D--LKRALDVILMRIGYETVLQKIDPAGWEDRYDNVMEILSLA---------GDGDSLPE 543 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 L+ AAL D+ + L TLH AKGLEFP VF++G+EEG+FP S D+ +E Sbjct: 544 LLAQAALYTDAD-RDSGGQGINLSTLHGAKGLEFPLVFMIGLEEGIFPHSRSSDDPAEIE 602 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YVG+TRA ++L LT RRL+G RPSRF+ E+ + +E RP Sbjct: 603 EERRLCYVGMTRAQERLILTRVRERRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEV--RP 660 Query: 654 VSHQRMGTPM 663 R P Sbjct: 661 SVGYRFNRPS 670 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 715 bits (1845), Expect = 0.0, Method: Composition-based stats. Identities = 249/638 (39%), Positives = 362/638 (56%), Gaps = 23/638 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L LN +Q EAV +L+LAGAGSGKTRV+ ++IA+L+ P +I+A+ Sbjct: 1 MD---FLKELNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVAL 57 Query: 61 TFTNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EM+ RI ++G +W GTFHG LL+ +L F I D DQ Sbjct: 58 TFTNKAAEEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDENDQ 117 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQ 178 L+K ++K +N K + R I+ KD+ + P S N ++ +VY+ Y+ Sbjct: 118 EDLIKDILKDLNR-AKDYNARDIKEKISRLKDQLITPQEFSSLISNSFDEIVLEVYKRYE 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + R +DFA+LLL + L KP I +++ +LVDE+QDTN QY +++ Sbjct: 177 KELRRNNALDFADLLLYSIRLLQEKPAICGFLQDKIEYVLVDEYQDTNKAQYELFKIIVL 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D K +VGDDDQSIY +RGA +NI R DF I L +NYRST IL AN LI Sbjct: 237 DKQKFSVVGDDDQSIYSFRGADYQNIFRLEKDFKNLRVIFLTKNYRSTQQILEIANVLIA 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN+ R K+LW+D DG L+ A NE DEA FV +IK G +E A+LYR+N Sbjct: 297 NNDKRYPKELWSDKKDGTYPVLFRALNEEDEANFVARQIKLEVAKGRRWSEIAVLYRTNR 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EEAL++ ++PY++ GGM FF+R+E+KD ++YL +I N ND + +R++N P RGI Sbjct: 357 QSRSFEEALIRNNIPYKVIGGMSFFDRKEVKDIVAYLNVIYNPNDIVSMKRIINVPRRGI 416 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD T +++R+ ++ +L +A +E+ + ++ F EL L + L Sbjct: 417 GDATFNMIREY-YNKGYSLLEAVKEV-------SKIKKEVKSFYELWTYLLVLKDSLTLR 468 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +I + + +E ++ ++ + R+ENL EL+ FS +D L FL+H Sbjct: 469 DLISTIINKTNYLSEFENQEKKELENRMENLMELMDFADNFSGKAQD----TLGEFLTHL 524 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + ++ + V L+TLHS KGLEF VF+VGMEEG+ P + ++EERRL Sbjct: 525 SLTNSKLESTLEEGKVSLITLHSVKGLEFEVVFLVGMEEGILPHYNA-TTKEEIQEERRL 583 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 YVG+TRA +KL L+YA R Y PSRF+ E+ Sbjct: 584 CYVGITRAKEKLYLSYAAKRY----SRYQEPSRFLEEI 617 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 253/667 (37%), Positives = 360/667 (53%), Gaps = 16/667 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + +LN +Q+EAV LVLAGAGSGKT V+ +IA+++ I AVTFTNKA Sbjct: 1 MTTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKA 60 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ +L+ G++ G+ V TFH L ++R H F I D ED L+K Sbjct: 61 AREMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRA 184 ++ D I++ K+ + P S + EQTW V++ Y +A Sbjct: 121 IMLKDG-DTNTDMIDLVQSQISNWKNGLIEPDEALSKAQSEGEQTWALVFERYNKALKAY 179 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ +L+ P +L +++R +LVDE+QDTN+ QY ++ L GD G + Sbjct: 180 NAVDFDDLIRLPSKLFSEHPEVLNRWQQRIRYLLVDEYQDTNSSQYKVVQQLIGDRGTLT 239 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY WRGA+ EN+ DFP I+LEQNYRST+ IL AAN LI NN Sbjct: 240 VVGDDDQSIYAWRGARPENMSLLKVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEF 299 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVL 363 K LW+D GE I + E EA V I T + + A+LYR N Q+R++ Sbjct: 300 DKTLWSDLGMGETIRVIKCPTEDAEAERVATEILTQRLRRQCKFKDFAVLYRGNHQARLM 359 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E L +PY I GG FF R EIKD + YLRLIAN DD AF RVVNTP R IG TL Sbjct: 360 ELKLQHHQIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTPRRQIGTGTL 419 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + S +R ++LW AC E+ + + + +++F ++++ + Sbjct: 420 EALGRYSTERDISLWAACDEMGLQALIPKQGLERIRKFSGWLNSVRSNCHNGDPVQAIRE 479 Query: 484 VIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDL-------MPLQAF 534 +I D Q + + R EN+ LV + + +E+ED + Sbjct: 480 MIDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDADGEERINTAISKL 539 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L LE E + +T D VQLMTLH++KGLEFP VF++G+EE + P + S++E +EE Sbjct: 540 LLQDMLERQEEEDET--DRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEE-DNIEE 596 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRLAYVG+TRA + LT+T A TR+ +G++ PSRF+ ELP E VE + Sbjct: 597 ERRLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDVEREGFSEATPEQI 656 Query: 655 SHQRMGT 661 + T Sbjct: 657 EKKGKET 663 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 713 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 237/668 (35%), Positives = 365/668 (54%), Gaps = 20/668 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S+ ++SLN QR+AV + +L+LAGAG+GKTR + RIA ++ SP SI+AV Sbjct: 1 MAKSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVD-RGISPKSILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+GQ++ + V TFH L R+LR +F I +Q Sbjct: 60 TFTNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L++RLI ++ P+ + ++ K+ GL I+ + + +YQ Sbjct: 120 SGLIRRLIVRHGGITEKITPKDVLSSMSRMKNSGLGLDSIE------DNLTANIAASYQR 173 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +LL+ A +L + + +++RF I VDEFQDTN++Q + + L G Sbjct: 174 ELQAQNSVDFDDLLILADKLLKEHRDVREAWQQRFRYITVDEFQDTNSLQMSLLGHLVGP 233 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGDDDQSIYGWRGAQ+ NI F FP I+LE+NYR T+ IL ANALI + Sbjct: 234 EHNVCVVGDDDQSIYGWRGAQISNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRH 293 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N GR K L GE + L + +EA F++ I+ + G + AIL+R+N Sbjct: 294 NLGRRDKTLRAHKGGGEAVRLISMPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANT 353 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR++E+ L + +PYR+ G FF+R+E+KD +SYL I N D R++NTP RGI Sbjct: 354 QSRIIEQTLREHKIPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPPRGI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 + T +V SR+ ++W A ++ AL+ RA +++Q F ELI D Sbjct: 414 SELTSHLVIDWSREHGNSVWAALQDEEFLAALSTRARNSVQAFNELIAKYIDLFQDKETD 473 Query: 479 --VQTDRVIKDSGLRTMYEQEKGEKGQT--RIENLEELVTATRQFSYNEEDEDLMPLQAF 534 +++I+++G + + + R+ ++ ++ + R F + L+ + Sbjct: 474 FGDILEQLIEETGFSEYVTRLCKTEAEIQKRLVSIGDVKASLRNF-----WQPGKTLRDY 528 Query: 535 LSHAALEAGEGQAD-TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 L+ L+ + D + V L+T+H+AKGLEFP V++VG+EEG+ P + SL++ G + Sbjct: 529 LAQVTLDKEDNDDDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLED-GNCD 587 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YVG+TRA +KL LTY TR YG + + S F+ E+P +E + ++ Sbjct: 588 EERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLMEYYKWEDLMNAE 647 Query: 654 VSHQRMGT 661 + + G Sbjct: 648 ATEEESGN 655 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 236/640 (36%), Positives = 348/640 (54%), Gaps = 15/640 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN+ Q AV AP S +LVLAGAG+GKTRV+ RI L+ +P I+AVTFTNKAA E Sbjct: 6 LNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIKE-GIAPREILAVTFTNKAAKE 64 Query: 70 MRHRIGQLMGT--SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 ++ RI V TFH L +LR N +F I D D +LLK+ + Sbjct: 65 LKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQALNRENNFIIYDQSDTDKLLKQCL 124 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + NL K+ ++I+ K+ L P + +Y+ YQ+ + Sbjct: 125 QKFNL--KKTLSSSIQYHISQAKNRLLYPEDLDP--EEYVDPVVSIYKEYQQRLKETNAL 180 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL +L+ + P + + Y E + +L+DE+QDTN+ QY + +AG + VG Sbjct: 181 DFDDLLFLTVKLFKDFPEVKKEYSELWKALLIDEYQDTNHAQYMMAQTIAGKHQNIFAVG 240 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 D DQSIY WRGA + NI F D+P A +RLE+NYRS NIL+AANALI+NN RL K Sbjct: 241 DPDQSIYSWRGANIHNILNFEQDYPQARVLRLEENYRSYGNILNAANALIQNNASRLKKN 300 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEA 366 L + GE I ++ + DEA FV + I + L + I YR+N QSR E+A Sbjct: 301 LRSVKGPGEKIRVFLGKTDKDEAEFVASEIYRLHKRSNIPLRDFCIFYRTNFQSRTFEDA 360 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 LL+ +PY I GG+ F++R+EI+D L++LR+ + D AF+R VN P RG+G + + Sbjct: 361 LLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKCDVVAFDRTVNLPKRGLGPSAISSL 420 Query: 427 RQTSRDRQLTLWQACRELLQEK--ALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + L + +ACR L+ L+ + L ++ + L + +PL+ Sbjct: 421 IDYALTNNLPILEACRNALETHSVKLSKKQQEGLWSYLSIFQQL-ERAYTLPLNEFVIAT 479 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I+ +G + +E + + R NL+EL + T ++ + L++FL AL++ Sbjct: 480 IRITGYLQVL-KEDPDTFEDRKSNLDELASKTFEWEQQNTEG---TLESFLDDLALKSST 535 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + + D V LMT+H+ KGLEF F+VG+EE +FP S LEEERRL YVG+T Sbjct: 536 DETELIADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANSKGNYENLEEERRLCYVGIT 595 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 RA L LT A+TR L+G +PSRF+ E+P + + +V Sbjct: 596 RAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDYLIQV 635 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 250/642 (38%), Positives = 358/642 (55%), Gaps = 20/642 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L+SLN +QREAV+ + LLVLAGAGSGKTRVL ++AWL++ + P+ I+AVTFT Sbjct: 5 SPVLESLNPRQREAVSYEGTPLLVLAGAGSGKTRVLTSKLAWLVAERSVPPWRILAVTFT 64 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQL 120 NKAA EM+ R+ ++ + TFH ++L + ++F + D D L Sbjct: 65 NKAAREMKDRVDAMLDGGYPYGQISTFHSFGLQMLFRNRDALEARGYRRNFVVFDRGDSL 124 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 L+K+ +KAM LD Q P + I+ K G P + G +E ++Y Y ++ Sbjct: 125 SLVKKSMKAMKLDTSQMEPSWVLECISKAK-TGSDPVSMD--GAILEGDMAELYSLYTKS 181 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 G DF +L++ L IL+ R+R ILVDE+QD N Q+A +RLLAGD+ Sbjct: 182 LKEQGAFDFDDLIVMPLHLMSTDRDILKKERDRLDWILVDEYQDVNRPQFALLRLLAGDS 241 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 VM VGD DQSIYGWRGA + I F FPG++ I LEQNYRST IL AAN++I NN Sbjct: 242 PNVMAVGDPDQSIYGWRGADMSVILGFERHFPGSKVILLEQNYRSTETILDAANSVIGNN 301 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+LWT + GEPI++ +E EAR+V + ++ G + A+LYR NA S Sbjct: 302 VNRPEKRLWTARSGGEPINVVTLGDERAEARYVSDVVEELLSLGYRYTDMAVLYRMNALS 361 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ ++ +PYR+ G F++R+EIKDA+SYLRL N D +A RV N P RG+G Sbjct: 362 RNFEQEFVKRGLPYRVVKGTAFYDRKEIKDAISYLRLAVNPRDASALARVANVPPRGLGA 421 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETADMPLHV 479 + L+ V + L G+ ++ + +L +D L+ Sbjct: 422 KGLESVESYLSTHASEARTTWCRIADGGCGLRGKGDKGIRDLARHMISLIDIGSD--LNR 479 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + ++ G + E+ ++ + R EN+ EL + + L+ L+ A Sbjct: 480 AVEYIMDVIGYGSYLEKGYPDQFEERRENVMELTSIS---------PGSESLEDVLAEIA 530 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRL 598 L + + D D + L +LH+AKGLEFP VFIVGME+G+FP SLD G LEEERRL Sbjct: 531 LYTDQ-EVDDIPDGISLSSLHAAKGLEFPVVFIVGMEDGIFPHGRSLDGGRDELEEERRL 589 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 YVG+TRA ++L LT + RRL+G + + SRFI E+PE Sbjct: 590 CYVGMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPENY 631 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 246/641 (38%), Positives = 363/641 (56%), Gaps = 16/641 (2%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q EAV LLVLAGAGSGKT V+ +I +L+ P+++ A+TFTNKAAA Sbjct: 22 KLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNVGYLPHTVAAITFTNKAAA 81 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ +++ SQ G+ + TFH L ++LR ++F ILDS D +++ L+ Sbjct: 82 EMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGELL 141 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGL 186 + +A I+ K++ P + Q+ N EQ +VY +YQE Sbjct: 142 GGTG----KEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQQTARVYASYQETLQSYQA 197 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 VDF +L+ L + ++ R +LVDE QDTN Q+ ++LL G G V Sbjct: 198 VDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFTAV 257 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA +EN+++ ++P + I+LEQNYRST+ IL AN +IENN K Sbjct: 258 GDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLFTK 317 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA---LAECAILYRSNAQSRVL 363 KLW+ +GEP+ + NE EA +VV++I + GG A+ A+LYR Q+R+ Sbjct: 318 KLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYRGKHQARIF 377 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEAL A +PYR+ GG FF++ EIKD LSY+RL+AN NDD AF R V TP RGIGD TL Sbjct: 378 EEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTPKRGIGDVTL 437 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + +L++A + L LQ FM++ + + + Sbjct: 438 GKLNTYAHEHECSLYEAAQNEEALATLNNTNRQHLQAFMDMFGSYRAKAETGEAGEFINS 497 Query: 484 VIKDSGLRTMY-EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 ++++ + E+G+ G+ + N+ +LV+ + + ED + AL Sbjct: 498 LLEEIDYENHLMQNEEGKAGEIKWRNVSDLVSWFAR----KGGEDGKNIIELAQTVALMT 553 Query: 543 -GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 EG+ + DAV L TLH+AKGLE+P VF+VG EEG+ P S++E G +EEERRL YV Sbjct: 554 LLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEE-GNVEEERRLMYV 612 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G+TRA ++LTLT+ R+ G + PSRFI E+P+E ++ Sbjct: 613 GITRAKRQLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDLK 653 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 261/693 (37%), Positives = 377/693 (54%), Gaps = 68/693 (9%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN QR V LL+LAGAG+GKTRV+ R+A L+ + I+AVTFTNKAA E Sbjct: 7 LNPAQRAGVEYRGGPLLLLAGAGTGKTRVITQRVAALIDE-GVPAWRILAVTFTNKAAGE 65 Query: 70 MRHRIGQLMGTS-----QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 MR RI L+ + G W+GTFH + R+LR H L ++F I D++DQ L++ Sbjct: 66 MRERIAGLLEMELDELRRDGPWIGTFHSICARILRRHGQGVGLTRNFSIYDADDQKTLMR 125 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACD 182 R++K +++D K + A+ I++ K+ G H + + Y PV +K + Y+ Sbjct: 126 RVLKDLDIDPKAFSASAALGKIDAAKNLGYARHQLDAMNYSEPVASWTRKAWTLYEGRLR 185 Query: 183 RAGLVDFAELLLRAHELWLN------KPHILQH--------------------------- 209 A VDF +LL A EL +P Sbjct: 186 AADAVDFNDLLALAVELLRKAKPAQPQPGARSFGSGSGSGSGSGARRMALRTTRGPGSGA 245 Query: 210 -------------YRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 R RF +++VDEFQDTN +Q + LL G + ++ +VGDDDQ+IYGW Sbjct: 246 PTASGGAVNPVLGLRRRFFHVVVDEFQDTNPVQAELVELLCGPSAQLCVVGDDDQAIYGW 305 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGE 316 RGA V+ I F + PG E IRLEQNYRST++IL ANA+I R K+LW+D GE Sbjct: 306 RGADVKQILNFPDRHPGCEVIRLEQNYRSTTHILDCANAVIRGGARRHSKRLWSDLGPGE 365 Query: 317 PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 L+ +E DEA++V R++ D G + E A+ YR++AQSR LEEA+ A + YR+ Sbjct: 366 RAELHGFADERDEAQYVARRVRRAIDEGESPGEIAVFYRTHAQSRPLEEAMRLAGVRYRM 425 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 GG+RFF+R+EIKD ++YLRL+ N D RV+N P R IG RT++ + + ++ + Sbjct: 426 LGGIRFFDRREIKDLIAYLRLLTNPGSDLDCLRVINVPARRIGARTIERLSAWAISKESS 485 Query: 437 LWQAC---RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTM 493 L+ AC + +E L A A++ F EL++ L ++ ++ H V+ + Sbjct: 486 LYDACGPASKHGEEAGLGRAAVKAVKGFWELVEGLRDDSEELSHHETASLVLGRTNYLES 545 Query: 494 YEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA 553 + E + +TR ENL E A +F + D + L +L +L AG +A T A Sbjct: 546 FAAE--QDAETRTENLYEFRGALEEFGEEQPD---VSLAEYLEQISLAAGGDEA-TVDAA 599 Query: 554 VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-----GRLEEERRLAYVGVTRAMQ 608 + LMT+HSAKGLEF +V + GMEE +FP SLD LEEERRLAYV ++RA + Sbjct: 600 ITLMTIHSAKGLEFDRVMLTGMEERVFPHVRSLDPENPKGREALEEERRLAYVAISRARR 659 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 L+L++ E R L+G + PSRF+ LPEE + Sbjct: 660 WLSLSFVERRFLWGSTQLNEPSRFLRALPEEGI 692 Score = 51.4 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%) Query: 644 VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 P + D+ G RVRH K+G G ++ GSG ++L + F Sbjct: 772 AEPETGPYEPAEPETTVEYEAHADAEIFQGMRVRHKKYGVGIVIGWTGSGPTAKLTIGFG 831 Query: 704 GQGIKWLVAAY 714 G + +VA + Sbjct: 832 GT-RRTIVARF 841 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 248/650 (38%), Positives = 362/650 (55%), Gaps = 26/650 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q+EAV R LLVLAGAGSGKTRV+ R+A L+ P I+AVTFTNKAAA Sbjct: 4 GLNPEQQEAVDTLRGPLLVLAGAGSGKTRVVTFRMANLIK-HGTQPDRILAVTFTNKAAA 62 Query: 69 EMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+HR+ L+ T V TFH RLLR H P+ F I D DQ L + ++ Sbjct: 63 EMQHRLSALLKTKSKIKPQVSTFHSHCVRLLRRHARVLGYPEKFAIYDRGDQESLARGVL 122 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRAGL 186 + + + P + I S K G+RP + + E Y+ YQ+A AG Sbjct: 123 RDIRVPSDLMRPGDLVTQIGSWKTLGIRPQEAERLASTDKEHLAASGYKKYQKALRHAGA 182 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 VDF +LL+ EL+ P + Q +F ++LVDE+QDTN +QY IR LA + + +V Sbjct: 183 VDFDDLLMLTEELFKIAPQVRQQEARQFDHLLVDEYQDTNGLQYRIIRALADEHRNICVV 242 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA+V++I +F ND+P A+ +RLE NYRSTS IL AN LI N R K Sbjct: 243 GDDDQSIYGWRGAEVKHILQFKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDK 302 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLEE 365 L A GE + +E++EAR VV I +D + AIL+R+N Q R +E Sbjct: 303 VLKAARAGGERPRIEQYPSEVEEARQVVADIAFRLKDGTRDPRDFAILFRTNEQPRAIET 362 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L +A +PY + G FF+R+E++D L+YLR I + D+ + R++NTP RGIG+R+++ Sbjct: 363 ELRKAKLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPPRGIGERSVET 422 Query: 426 VRQTSRDRQLTLWQACRELLQEK----------ALAGRAASALQRFMELIDALAQETA-D 474 V + T+W L + L+ + +A++ F LI ++ TA Sbjct: 423 VLSEAVRSGKTVWDVVSNLSEGPTLFGDAEKTTTLSDKNVAAIRSFSNLIQRYSEATARG 482 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEK--GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 L T ++I ++G + E+ Q R+ +EE+V + + EE + Sbjct: 483 DSLAELTRKLISETGYEQEVRRIYPDPEEQQMRLAAVEEVVNSVAAYEAEEEK---PSIS 539 Query: 533 AFLSHAAL----EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-- 586 +L L + + ++A+ LMTLH++KGLEFP V+++G+E+G+ P S+ Sbjct: 540 GYLDQVTLGQREMGDDKEKQLARNAIALMTLHASKGLEFPHVYMIGLEDGILPHSRSVKA 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 D +++EERRL YVG+TRA ++LTL+ A TR +GK PSRF+ E+ Sbjct: 600 DSQDQIDEERRLCYVGITRAQERLTLSLALTRMKWGKPRDTTPSRFLFEI 649 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 247/660 (37%), Positives = 360/660 (54%), Gaps = 9/660 (1%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q++AV LVLAGAGSGKTRV++++IA L+ SP I AVTFTNKAA Sbjct: 2 KLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAAR 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ +G Q G+ V TFH L +L+ + + + D DQ LLK L Sbjct: 62 EMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMTLFDEHDQFALLKELT 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEACDRAGL 186 + L E + R+ + I++ K++ + P + + QT+ K Y+ Y Sbjct: 122 ADV-LKEDKDLLRELISVISNWKNDLISPKQAFALARDAKYQTFAKCYERYATQIRTYNA 180 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L++ L+ + ++ + +LVDE+QDTN QY I+LL GD +V Sbjct: 181 LDFDDLIMLPTLLFKQNEEVRSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTVV 240 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA+ EN+ R +DFP I+LEQNYRST IL AN LI+NN K Sbjct: 241 GDDDQSIYSWRGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDK 300 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSRVLEE 365 KL++ GE + + A NE EA +V I + AILYR N QSR+LE+ Sbjct: 301 KLFSTIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSRKTKYKDYAILYRGNHQSRLLEK 360 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L+Q +PY+I GG FF R EIKD ++YLRL+ N++DDAAF R+VNTP R IG TL Sbjct: 361 VLMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDAAFLRIVNTPKREIGTATLQK 420 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + ++++ ++L++A E + + +A +LQ+F I L E ++ Sbjct: 421 LGELAQEKHISLFEAIFEFELIQRITPKAYDSLQKFGRWIVELNDEIQRSEPERAVRSML 480 Query: 486 KDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE-- 541 + + + + +N+ L +E + M L ++ L Sbjct: 481 SAIHYEEYLYEYATSPKAAEMQSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDM 540 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 G+ D D VQLMTLH++KGLEFP V+++GMEEG+ P Q S+DE +EEERRLAYV Sbjct: 541 LERGEDDDDSDQVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDE-DNVEEERRLAYV 599 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA ++LT + RR YG+ V PSRF+ ELP + V R + ++ ++ Sbjct: 600 GITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDVLWERDKPKLTTEQKQEKTQN 659 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 257/658 (39%), Positives = 362/658 (55%), Gaps = 30/658 (4%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ +++ LN QR A LLV+AGAG+GKTR HR+A L++ P ++M +T Sbjct: 3 DLEAIVEGLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLA-RGVPPEAVMCIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSED 118 FTNKAA EMR R L+G + + TFH A LLR + D F + D Sbjct: 62 FTNKAAREMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTI 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-------------------HI 159 QL LLK I N D K P +W I K+E P I Sbjct: 122 QLALLKEAIAERNFDLKANRPESFLWRIGRYKNELADPESLLARQPSHDLMDWSRVLEMI 181 Query: 160 QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 +S V + ++++ Y+E R +VDF +L+ ++ KP I + RFT + V Sbjct: 182 RSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRADLQRRFTYLQV 241 Query: 220 DEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 DEFQDTN Q ++LLAG VM VGDD QSIY WR A + I F FPGA TI L Sbjct: 242 DEFQDTNVAQLHMVKLLAGKRQNVMAVGDDAQSIYSWRSADIRCILEFERHFPGARTILL 301 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 EQNYRST I+ AAN LI +N G+ K+L+T +G P+ + A E+DEA++VV RI+ Sbjct: 302 EQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAETEVDEAKWVVQRIRA 361 Query: 340 WQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 + G + AILYR+ AQ R EE L +AS+PY++ GG RF++R+E++D+L+YLRL+ Sbjct: 362 GAEAGRRWGDFAILYRTTAQGRPFEEELREASIPYQVVGGPRFYDRREVQDSLAYLRLVH 421 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N D + ERV+N P RGIG+R L + + R + L A R E L AA+ + Sbjct: 422 NPRDSVSLERVLNAPRRGIGERGLQRLLALAAQRGVDLIAALRVAADEGVLQDEAAAGAR 481 Query: 460 RFMELIDALAQETADMP--LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 + + + + P +R++++SG ++E K + R E +E L+ A Sbjct: 482 QLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRSEVVESLIAAMH 541 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEE 577 +F D L A+L H AL G+ + ++ D V+L T+HSAKGLE+P VF+VGME+ Sbjct: 542 EFERRSPDG---GLGAYLDHLALLEGQ-EDESGGDVVKLQTIHSAKGLEYPVVFVVGMEQ 597 Query: 578 GMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 G+ P Q +L+E G LEEERRL YV +TRA ++L LT A R G+ V PS+F+ E Sbjct: 598 GLLPYQRALEE-GNLEEERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 703 bits (1816), Expect = 0.0, Method: Composition-based stats. Identities = 247/668 (36%), Positives = 371/668 (55%), Gaps = 10/668 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 ++ LN Q++AV LVLAGAGSGKTRV+ ++IA L+ V I AVTFTN Sbjct: 49 NIVMRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRVCGYQARHIAAVTFTN 108 Query: 65 KAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ R+ Q +G G+ + TFH L +++ + + +F + D +DQL LL Sbjct: 109 KAAREMKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKSNFSLFDDQDQLALL 168 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACD 182 L + L++ + +Q + I++ K++ + P + E+ + Y Y Sbjct: 169 TDLTERW-LEKDKTQLQQLIATISNWKNDLIDPAQAAAQARSARERLFADCYGLYDTQLK 227 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 ++DF +L+L L P + + +++R +LVDE+QDTN QY ++LL G + Sbjct: 228 SCNVLDFDDLILLPTLLLRRDPEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGSRAR 287 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 +VGDDDQSIY WRGA+ +N+ DFP + ++LEQNYRS+ IL AAN LI NN Sbjct: 288 FTVVGDDDQSIYSWRGARPQNLVLLKEDFPALQVVKLEQNYRSSQRILKAANILIANNPH 347 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSR 361 K+L+++ GEP+ + A NE EA VV I + A ++ AILYR N QSR Sbjct: 348 VFEKRLFSELGYGEPLKVITANNEDHEAERVVGELIAHHFIHKTAYSDYAILYRGNHQSR 407 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 V E+ L+Q +PY+I GG FF R EIKD LSYLR++ N +DD+AF R+VNTP R IG Sbjct: 408 VFEKMLMQNRIPYKISGGTSFFSRAEIKDLLSYLRVLTNPDDDSAFLRIVNTPRREIGPS 467 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 TL + + R ++L++A ++ E+ L+GR ++LQ F +D L++ Sbjct: 468 TLQKLGAWANQRGISLFRASFDVGLEQTLSGRGLASLQHFTRWMDELSRLCERDATAAVR 527 Query: 482 DRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 D +I + + + R++N+ +L + ++ M L ++ Sbjct: 528 D-LIHGIDYESWLCETSASPRAAEMRMKNVNQLFGWMTDMLQGSDLDEPMTLTQVVNRFT 586 Query: 540 LE--AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L G+++ D VQLMTLH++KGLEFP V++VGMEEG+ P Q S+DE ++EERR Sbjct: 587 LRDMMERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDE-DNVDEERR 645 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 LAYVG+TRA + L T RR YG+ + PSRF+ ELP++ + R VS Q Sbjct: 646 LAYVGITRAQKALVFTLCRERRQYGELMRPEPSRFLLELPQDDLSWESARKVVSPQERMQ 705 Query: 658 RMGTPMVE 665 R + + Sbjct: 706 RGQSHLAN 713 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 251/667 (37%), Positives = 377/667 (56%), Gaps = 32/667 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + L++LN +Q+ AV +L+LAGAGSGKTRVL R+A+L+ N SP +I+ +TF Sbjct: 1 MEKELETLNPEQKHAVKLINGRVLILAGAGSGKTRVLTMRMAYLIRYLNVSPRAILGLTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAAAEMRHR+ + + + + TFHG ++LR F + D +D R Sbjct: 61 TNKAAAEMRHRLANFVDSKLAKQVTLCTFHGFCMQILRQDIAKLGYTTKFSLYDEQDVQR 120 Query: 122 LLKRLIKAMNLDEKQWPP-RQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQE 179 L+ +++ + E + P + I K++G+ P +I+ + ++ Q VY+ Q Sbjct: 121 LINMIVRDILQHEGELPSLTSTLNAIRHAKNKGISPENIEISESKWHNSFVQDVYRRLQA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + VDF LL EL P +L+ Y+ERF +++DE+QDTN IQY LL Sbjct: 181 SMRAYNAVDFDHLLSLTVELLERFPDVLEAYQERFRYMMIDEYQDTNPIQYRLASLLTSK 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQSIYGWRGA V+NI F A I+LEQNYRST+ IL AANA+I++ Sbjct: 241 YQNLCVVGDDDQSIYGWRGADVKNILEFEK----ATVIKLEQNYRSTNFILKAANAVIDH 296 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNA 358 N R KKLW++ +G PI ++ NEL+EA+ VV RI +++ + AILYRSNA Sbjct: 297 NQYRHKKKLWSEKGEGHPIEVFHTPNELEEAQVVVKRIVKMKESLNLQWKDFAILYRSNA 356 Query: 359 QSRVLEEALLQ----------ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 SR E AL++ +PY I+GG F+ER+E+KD +YLRLI N D A Sbjct: 357 LSRQFETALMRQVWKFQNRWIQGIPYEIFGGTEFYERKEVKDLCAYLRLIINPADQEALL 416 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA------LAGRAASALQRFM 462 R+VN P RGIG+ +LD++ +R Q LW +E+ +K G+A + F Sbjct: 417 RIVNQPRRGIGEDSLDLLTTHNRQFQRPLWDVLKEVANQKGEGAKLIYHGKAFKGICEFT 476 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFS 520 LI + + L +I+ + ++E + + EN++E V++ +F Sbjct: 477 HLISEAKKRFQEGNLAENLKWLIEQINYQKAIKEEVKSQQMRDFKWENIQEFVSSLAEFE 536 Query: 521 YNEEDEDLM--PLQAFLSHAALEAGEGQA---DTWQDAVQLMTLHSAKGLEFPQVFIVGM 575 + + L+ FL + ++ Q+ + +D V L+T HSAKGLEFP F+VGM Sbjct: 537 QQAQLNPDLESSLENFLGNMYVDNKFNQSTKNNRHEDRVSLLTFHSAKGLEFPVCFLVGM 596 Query: 576 EEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 E+ + P + S+ E G +EEERRL YV +TRA Q LT++ A+ R+ GK++ RPSRF+ E Sbjct: 597 EDHIIPHEKSMKETG-IEEERRLMYVAITRAQQHLTISMAQQRKRMGKDMASRPSRFLFE 655 Query: 636 LPEECVE 642 +P+E ++ Sbjct: 656 IPKELLK 662 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 702 bits (1812), Expect = 0.0, Method: Composition-based stats. Identities = 253/668 (37%), Positives = 376/668 (56%), Gaps = 33/668 (4%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LD+LN QR AV +L+LAGAGSGKT+VL R+A+LMS++ SP SI+ +T Sbjct: 4 DFKEELDALNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSILGLT 63 Query: 62 FTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAAAEMRHRIG + + TFH ++LRA F + D +D Sbjct: 64 FTNKAAAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILRAEIHKLGYTPQFSLYDEKDVQ 123 Query: 121 RLLKRLIKAMNLDEKQWPP-RQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAYQ 178 RL+ + + + E + P IN +++GL I G+ + + +YQ Q Sbjct: 124 RLIGLIARDVLEHEAELPSLASTTAVINQAQNKGLASEEICDTGSEWHDEFARTIYQRLQ 183 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + VDF LL +L+ N P +L+ Y+ER+ I++DE+QDTN +QY LL+ Sbjct: 184 ASLRAYNAVDFNNLLGLTVQLFENFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSR 243 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYGWRGA+V+NI DF A TI+LEQNYRST+NIL AAN +I Sbjct: 244 KYQNLCVVGDDDQSIYGWRGAEVKNIL----DFSDATTIKLEQNYRSTNNILKAANGVIS 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSN 357 +N R K LW++ +G+ I ++ A ++ +EA VV RI ++ + AILYRSN Sbjct: 300 HNQTRYQKVLWSNRGEGDLIEVFHAPSDKEEAEAVVYRIAHMREKYQLKWRDIAILYRSN 359 Query: 358 AQSRVLEEALLQA----------SMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 A SR+ E AL+ +PY I+GG F+ER+E++D +YLR+IAN D A Sbjct: 360 ALSRLFELALMNYAWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLRVIANPLDQEAL 419 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--------LAGRAASALQ 459 R++N P RGIG+ +LD +R QL LW + L + + +A +LQ Sbjct: 420 LRIINQPRRGIGEASLDAATAYNRSHQLPLWNVLKSLANREPAVQEVSSHWSQKALDSLQ 479 Query: 460 RFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT-RIENLEELVTATRQ 518 F+ +++ Q + T+ + + + + ++ K + + + EN++E V++ + Sbjct: 480 GFIGILENSKQRFEQDFSYALTELIEAVNYKKAINDEVKSAQMRDFKWENVQEFVSSLVE 539 Query: 519 F--SYNEEDEDLMPLQAFLSHAALEAGEGQAD---TWQDAVQLMTLHSAKGLEFPQVFIV 573 F S+ +E L F++ L+ Q+ +D V LMT HS+KGLEF F+V Sbjct: 540 FNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKNTQQKDQVNLMTFHSSKGLEFKACFLV 599 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 G+E+ + P + SL E G +EEERRL YVG+TRA Q LT++ A R+ GKE +PSRF+ Sbjct: 600 GIEDHIIPHEKSLKEVG-VEEERRLMYVGITRARQFLTISMARKRKRMGKEYASKPSRFL 658 Query: 634 GELPEECV 641 E+P+E + Sbjct: 659 HEIPKELL 666 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 236/721 (32%), Positives = 396/721 (54%), Gaps = 26/721 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN QR+ + +LVLAGAGSGKTRV+ +RI ++ +P +I+A+TFT KAA Sbjct: 2 SLNSSQRKIIETINGPILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKAAK 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+HRI ++ + + +GTFH + LLR ++ I D D ++K+++ Sbjct: 62 EMKHRISNMIDQKKLNQITLGTFHSIFSILLRKESHLLGYKSNYTIYDQRDSENVIKKIL 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + +NLD ++ I+ K+ +I N + K+Y++Y + C +A + Sbjct: 122 EDINLDI-SLSTKEIRRIISEYKNNL----YINKKNNKQSECLIKIYKSYIKRCLQAEAL 176 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF ++LL + L+ + P++L+ Y+ +F IL+DE+QDTN Q I+ LA + +VG Sbjct: 177 DFDDILLHTNHLFSHFPNVLRKYQNKFKYILIDEYQDTNLSQNTIIKSLAFQHKNLFVVG 236 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD QSIY +RGA++ NI F D+ A+ RLEQNYRST +I+ A+N +I N ++ KK Sbjct: 237 DDAQSIYAFRGAKISNILNFHIDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKK 296 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEA 366 +WT+ GE + +Y A +E +EA +V + I + + AILYR+N QS ++E A Sbjct: 297 IWTNNEKGEKVKIYSASSEKEEALYVASSIFSIIKKTKYHYKDFAILYRANMQSNIIEYA 356 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + ++PY+IYG + F +R+EI+D L+YLR+I N ND+ + R++ +T+ + Sbjct: 357 LKEKNIPYKIYGSISFEKRKEIRDLLAYLRIIVNSNDEESLLRILKKGN----KKTIKSI 412 Query: 427 RQTSRDRQLTLWQACRELLQEKA---LAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 S+ ++T+++ + + + L + + L+ + I+ + T Sbjct: 413 LDLSKKIRITVYEIIKNIENYQHLLILNQKTKNKLKNLISTIEKFRKNTEKKDAFAIAKE 472 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ + L+ + K E Q + N+ V+ ++ N E + L FL + LE Sbjct: 473 IV-NFLLKEDPKNYKNENFQYILNNIFCYVSEQKKLKDNGE----ISLSGFLQYFYLEID 527 Query: 544 EG--QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 E + ++ V LMT+H +KGLEF VFI+G+EE +FPS+ SLD ++EEERRL YV Sbjct: 528 EDMNHDENEENKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSSLDNQFKIEEERRLFYV 587 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV--EEVRLRATVSRPVSHQRM 659 +TRA +K LTYA +R L+G+ PSRFI EL + + E +++S + Sbjct: 588 ALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFIDRENQNSISSLSEKKEINSL 647 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 ++ +K G +V H FG G I++++ E+ ++ F G K ++ +A L+ Sbjct: 648 VNNKNKHYENFKAGVKVFHKNFGTGIILDLQ--NENKIARIKFIKSGEKKILLKFA-LDK 704 Query: 720 V 720 + Sbjct: 705 L 705 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 250/729 (34%), Positives = 395/729 (54%), Gaps = 33/729 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD + LN +Q+EAV ++ V+AGAGSGKTRVL RI L++ P I A+ Sbjct: 1 MD---YIQGLNKEQKEAVLTKAKHVRVIAGAGSGKTRVLTTRIVHLIADLGYYPSKICAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++ + + T H L R++R + NL ++F ILD+ DQ Sbjct: 58 TFTNKAANEMKERMEAMLPDAI-RVHTSTIHSLCVRIIREEYEALNLVRNFTILDTSDQQ 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQ 178 +++ K + D K R+A+ YI++ K G+ + N EQ +Y+ Y Sbjct: 117 AVMREAYKQFDYDRKDISFREALTYISNNKFAGVDVAQAERMAGSNYHEQKKVNLYRFYV 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LLL + L+ + +R RF +LVDEFQD +++QY + L G Sbjct: 177 NRLHELFALDFDDLLLEVNRLFKENLEVRDKWRRRFDVVLVDEFQDVDHVQYGIVDALVG 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D ++ +VGD DQ+IY WRGA V+ I F +P +ETI L QNYRST +IL +AN LI+ Sbjct: 237 DENQLYVVGDPDQTIYTWRGANVDFIIDFDKKYPESETITLNQNYRSTQHILDSANTLIK 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN R K L+ + P+ + EA +V NR+ D G + + A+LYRSN Sbjct: 297 NNKDRPDKALYANKESEFPVQYATLDDGDAEAYWVANRMLELHDEGHSYLDMAVLYRSNY 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR LE+ L+ +PY IYGG+RF+++ EIKD +SYLR+I DD A R + P RGI Sbjct: 357 LSRALEKVLMARRIPYVIYGGLRFYDQAEIKDMMSYLRMIT-HGDDLALRRSIAMPRRGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TLD + +R+R++T++++ + +A ++ ++ +I+ + + + Sbjct: 416 GEKTLDTIMLQAREREMTMYESMLYDVHH----QQATPKIRNYVMMIEDFREMAQEASIE 471 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+K SGLR +E+ + R+E+L+EL+ F N E+ L ++ Sbjct: 472 TIMQYVLKRSGLREHFEK---IQELERVESLKELIGDALTFQENYEN---PSLDEYIQMV 525 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERR 597 +L + + + V+LMT+H+AKGLEF VFI+G+ + +FP++ S+ EG G ++EERR Sbjct: 526 SLYGDKSEV-VEGEYVRLMTVHAAKGLEFENVFIMGLADNIFPNKNSIQEGSGGIQEERR 584 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP-EECVEEVRLRATVSR---- 652 L YV +TRA ++L L+ + Y R SRFI E+ +E E+ T+SR Sbjct: 585 LMYVAITRAKERLFLSNNIGYN-FVAGGYARASRFIKEMHLDEKTSEMEATPTISRSEVQ 643 Query: 653 ---PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIK 708 + G ++ +K G +V H FGEG ++ + + +++AF G K Sbjct: 644 DAISSFEKASGLSKLKKKIKFKSGDQVVHDDFGEGIVIRV----DDDTIKIAFNFPHGTK 699 Query: 709 WLVAAYARL 717 + YA + Sbjct: 700 VISRKYAGI 708 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 260/646 (40%), Positives = 364/646 (56%), Gaps = 11/646 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L LN QREAVA +LVLAGAGSGKTRV+ +I L+ P I AVTF Sbjct: 1 MSAALADLNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTF 60 Query: 63 TNKAAAEMRHRIGQ-LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R+ Q L G S G+ + TFH L +LR ++F ++D D L Sbjct: 61 TNKAAREMKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLT 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 L++ L++ M I+ K++G P + + +++ Q+VY+ YQ A Sbjct: 121 LVRNLLREMQGPSD--LAESIQARISKAKNDGHGPEDM-PIRDRLDELAQRVYRPYQRAL 177 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 VD +L+L EL + ++ER +LVDE+QD+N QY ++ L Sbjct: 178 KACNSVDLDDLILLPTELLSRFAEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQ 237 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDDDQSIY WRGA +N+QR DFP I+LEQNYRST IL AAN LI +N Sbjct: 238 NLTAVGDDDQSIYSWRGAAADNLQRLAQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNP 297 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQS 360 KKLW+ +G+ I + A +E DEA VVN I + G + AILYRSN QS Sbjct: 298 HLFEKKLWSSLGEGDRIQVIVARDETDEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E AL A +PY++ GG+ FFER EI+D L+Y RL+AN +DDAAF R VNTP RGIG Sbjct: 358 RPFETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLANPDDDAAFLRAVNTPRRGIGS 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 TL+ + + ++ RQ++L+ A E ++ LA R AL+ F + ++ A+ A L Sbjct: 418 ATLETLGEHAKARQMSLFAALWE--EDLDLAERPLLALRSFGDWLNRTAEACARSELMPT 475 Query: 481 TDRVIKDSGLRTMYEQEKGE-KGQTRIENLEELVTA-TRQFSYNEEDEDLMPLQAFLSHA 538 ++++ G R E E E + + + ENLEEL+ R + ++L L LS Sbjct: 476 LRDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLLEQEDGPKNLAELLNRLSVI 535 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 + + + ++L TLH AKGLEF +VF+VG+EE + P + S + ++EEERRL Sbjct: 536 HILERDEDDEERD-VLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNS-ETPAQIEEERRL 593 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 YVGVTRA KL+L+Y R+ YG+ PSRF+ ELP E ++ Sbjct: 594 FYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLDWA 639 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 229/642 (35%), Positives = 343/642 (53%), Gaps = 15/642 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +QR AV LL++AGAGSGKTRV+ RIA+++ I+A+TFTNK Sbjct: 1 MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYMLEC-GILQSRILALTFTNK 59 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM RI L G V TFH +LR H ++F I D D+ L++ Sbjct: 60 AAHEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIRE 119 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 K ++L + ++ K + +Q + ++ Y A Sbjct: 120 AAKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQ-------HKERALWHEYHTALKLFN 172 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF +L++ +++ P IL Y+ R+ ILVDEFQDT+ QY +++LA T + + Sbjct: 173 AVDFDDLIVLPIQIFSEYPDILASYKSRYHYILVDEFQDTSAQQYRLMKMLA--TQNICV 230 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA +NI F DFP A I LEQNYRST IL+AAN +I +N R Sbjct: 231 VGDDDQSIYSWRGAHHDNILSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKE 290 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLE 364 K LW+ G+PI ++ E DEA F+ N I + + +L R+N+ R++E Sbjct: 291 KALWSGNDSGKPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIE 350 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 + LQ ++PYR+ GGM FF+R+EIKD LSYLR+I+N +DD R++NTP RGIG +TL Sbjct: 351 DVFLQENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLH 410 Query: 425 VVRQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDALA-QETADMPLHVQ 480 +V + +Q +++ A +++ + L +A++ F++LI + L + Sbjct: 411 LVSDIANTQQCSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYK 470 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + ++D QE + ++ + E+ + L +L+ L Sbjct: 471 VRKFVEDIQYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTL 530 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + + AV LMT+H++KGLEFP VFI G+E G P + S++E +EEERRL Y Sbjct: 531 LARDNVQKETEGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSIEEERRLFY 590 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 V +TRA +KL LT+ TR+ GK S F+ E+P+ V Sbjct: 591 VAITRAKEKLYLTHCRTRKRGGKREERTASPFLDEIPKHLVR 632 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 242/723 (33%), Positives = 383/723 (52%), Gaps = 22/723 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + + +SLN+++ EA+ L ++AGAGSGKTRVL +IA+L++V SP I+AVTFT Sbjct: 12 AKIFESLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFT 71 Query: 64 NKAAAEMRHRIGQLMGT--SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 NKAA+EM R+ Q T ++G + TFH L R+LR NL DFQI+D D+ + Sbjct: 72 NKAASEMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKNDFQIIDDNDKKK 131 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGL-RPHHIQSYGNPVEQ--------TWQK 172 +LK + K +L + + + K++ I + N + T K Sbjct: 132 ILKDIYKEHDLVPTDSNFKNLTRFFSWLKNKLYASDEEIIDFINSDPESEFYGDGETVVK 191 Query: 173 VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 +Y Y E +DF +LL++ +EL+ P I++ + +++ ILVDEFQDT+ IQY Sbjct: 192 IYNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKKWALKYSYILVDEFQDTSAIQYEI 251 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 I+ L+ ++ IVGD DQ+IY WRGA V I F DF +TI L +NYRST IL+A Sbjct: 252 IKYLSSQKAQLTIVGDPDQTIYRWRGADVNLILSFEKDFENTKTIILNKNYRSTKKILAA 311 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAI 352 AN LI+ N R K L TD +DG+ I AF+ E R+VV +I + L AI Sbjct: 312 ANNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPEAEVRWVVQKINDLKKQKIQLKNIAI 371 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 YRSN+ SR EE L+ + Y+I+GG +F++R+EIKDAL++LR+I + ND +R++N Sbjct: 372 FYRSNSYSRNFEEQLMNEKINYKIFGGEKFYQRKEIKDALAFLRVIYDGND-LQLKRIIN 430 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQE 471 P R IG+ +L+ + + ++ L+L++ +E + + + ++ A Sbjct: 431 VPPRKIGEASLNKIISFANEKNLSLYKTLVNHYKELPVPKEVIINIIALLNCVNKYKAAL 490 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 +HV +K+ G ++ G KG T EN+ L+ + + ++ L Sbjct: 491 RQGNKIHVVLKSFLKEIGFLKYVNEDVGLKG-TGEENIRALLEGIKSWEITNPNK---GL 546 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 + + + +L + ++ V LMT+H+AKGLEF VF+VGM E +FP+ + Sbjct: 547 KEYFEYISLISASDSSNESMSYVSLMTVHAAKGLEFDNVFLVGMCENIFPNYRAYKVAEA 606 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 +EEERRLAYV +TRA +KL ++ + LY + +PSRF+ E+ + + + + Sbjct: 607 MEEERRLAYVAITRAKEKLFVSDSRGLLLYSQT-EKKPSRFLKEMGIDINKHILQKDNSI 665 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 + + + G + H FGEG ++ + G + V F GIK L Sbjct: 666 FVDGELEDEEQIRKRNKKIIAGDVISHTFFGEGEVLEVNGD----TITVHFATTGIKSLA 721 Query: 712 AAY 714 + Sbjct: 722 KNH 724 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 694 bits (1791), Expect = 0.0, Method: Composition-based stats. Identities = 325/723 (44%), Positives = 484/723 (66%), Gaps = 11/723 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++L +LNDKQ+E + + N+LVLAGAGSGKT+VL ++IAWL+ V+ SIMAV Sbjct: 1 MKNNFLTKNLNDKQKEIITSSYKNILVLAGAGSGKTKVLTNKIAWLIDVKKYHSSSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNK A E+ +R+ L+ + +W+GTFHGL+++LL H+ ++ L ++FQI+DSEDQL Sbjct: 61 TFTNKGAKEIINRMKFLI-KNLKDIWIGTFHGLSYKLLCMHYTESKLFKNFQIIDSEDQL 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQE 179 +L+ ++ +M L+ + YI + KD+G+RP + + N + K+Y+ YQ Sbjct: 120 KLIHQINLSMKLNFNNKSYHNILEYIRNYKDKGIRPSFCEININNKKNILYNKIYKEYQT 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 CD+ GL+DF+ELLLR +EL++N I + Y+++F ILVDEFQDTN+IQY+WI+ + Sbjct: 180 TCDKLGLLDFSELLLRINELFINNKSISKFYKKKFKYILVDEFQDTNDIQYSWIKNFSSK 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +MIVGDDDQSIYGWRGA+ EN++ F+NDF + I+L+QNYRST+NIL AAN+LI N Sbjct: 240 ECFIMIVGDDDQSIYGWRGAKSENMKNFINDFSRTKIIKLQQNYRSTNNILQAANSLIMN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 NN R+GKKLWT+ G+ I++Y A+NE DE+ F++ I + E AILYR N+ Sbjct: 300 NNLRIGKKLWTEKKSGDLITIYQAYNEKDESNFIIKYILNNQKKLNNKKKEYAILYRKNS 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LEE LL+ ++ Y IYGG++FF RQEIK+ L+Y RLI N+ DD ++ER++N P R I Sbjct: 360 QSRSLEENLLKNNLKYDIYGGLKFFSRQEIKNTLAYFRLIVNKKDDLSYERIINFPKRKI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TL ++ S++++L+LW++ + L + +L+ F LID L + ++ LH Sbjct: 420 GEKTLKKIKNISKNKKLSLWES-TNFFIKNNLNDAKSFSLKNFFYLIDYLKENIKNLSLH 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + + VIK SGL YE+EK +RI+N +ELV + +QF + E +++ L+ FL+ + Sbjct: 479 EKFNFVIKKSGLLNFYEKEKKNINNSRIDNWQELVNSAKQF-FIENNKEKNILEKFLAFS 537 Query: 539 ALEAGEG-QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 LE+ D ++LMTLHS+KGLEFP VFI+GMEEG+FP+ + + +LEEERR Sbjct: 538 TLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIGMEEGLFPNIIYSNNKEKLEEERR 597 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 LAYVG+TRAM+KL +TY + R +YGK + PSRFI E+P + + T + + Sbjct: 598 LAYVGMTRAMKKLVITYVKYRNIYGKIIKREPSRFIEEIPSHYKKIIYENKTNTSKNEIK 657 Query: 658 RMGTPMVEND--SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 + N+ + Y++G++V H KFG G I+++E ++ L++ F+ GIK LVA YA Sbjct: 658 KDNYYYTTNNTKNNYEIGKKVFHPKFGFGLIIHIE---KNKILEIKFKKIGIKKLVAKYA 714 Query: 716 RLE 718 RLE Sbjct: 715 RLE 717 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 249/769 (32%), Positives = 368/769 (47%), Gaps = 62/769 (8%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +QR AV LLVLA AGSGKTRV++ R+ +L+ S TFT KAA Sbjct: 20 GLNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATFTRKAAR 79 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 E+ RI + +VGTFH L+ RLLR A LP DF + D+ DQ L++ +++ Sbjct: 80 ELVERISHRLP-DARLPYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKALVREIMR 138 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + E+ P++ + I+ K+ P + + Y+ Y+E + + Sbjct: 139 RHKVSEEDVAPQEILRQISQWKNARQTPGPELARRLFGSRRFMATCYEEYEEGLRKNRSL 198 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 D+ +LL R L ++P + R+ F +ILVDE+QDTN +Q IRLL+ + V +VG Sbjct: 199 DYDDLLCRLVGLLSSQPDVATALRQEFHHILVDEYQDTNPLQEELIRLLSRERRNVTVVG 258 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY +RGA+V +IQRF + +PGA + L +NYRSTS I+ +A ++I N+GR K Sbjct: 259 DDDQSIYRFRGAEVAHIQRFSDHYPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKT 318 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 + G P+ L +E EAR V ++ W GG + A+L+R+NAQS LE+A+ Sbjct: 319 VTAVRGGGSPVLLMEFPDEEAEARGVAGILREWIAGGGRPSRAAVLFRTNAQSLPLEKAM 378 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 A +P+ GG E +E +D ++YLRL+ N D + R+ N P RG GD ++ + Sbjct: 379 AAAGVPFFRPGGGGLLESREARDLVAYLRLLVNPFDRLSLARIFNVPPRGQGDEAVEELS 438 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 S E L E+ L + A D+PL DRV+ Sbjct: 439 ALSEAHPELPVAELLERLAERGGRREPLGKLSALLREGSE-AASRGDVPLS-LLDRVVAA 496 Query: 488 SGLRTMYEQEKGEK-GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 +G R +EK E+ + R+E LEE F E+ E PL AFL L + EG Sbjct: 497 TGYREWLTREKDEETRRRRLETLEEFRGLAGDFVREEDREASGPLAAFLEDLTL-SREGP 555 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM--SLDEGGRLEEERRLAYVGVT 604 ++ V LMT+H +KGLEF V + G+E+ + P + +EEERRL YV +T Sbjct: 556 DAEGRERVGLMTIHQSKGLEFDCVVVAGLEDQLLPFRSFAGGRSSTDIEEERRLFYVAMT 615 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR------------------- 645 RA ++L LT+A TRR+YGK PS F+ ++P E R Sbjct: 616 RARERLHLTWARTRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAPSAPSSSGRLPGQ 675 Query: 646 -------LRATVSRPVSHQRMGTPMVEN----------------------------DSGY 670 + P R+ +P V + Sbjct: 676 SRDGGSGFSPSFGHPSRRDRLASPSVGRPVFRGASKVERRQGEPSPAEGPASISGGERKD 735 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +G++VRH +FGEG +++ L V F + L+A A L Sbjct: 736 WIGKKVRHPRFGEGVVLDARSPDPDLELVVRFSEGPPRTLLARLANLTP 784 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 224/643 (34%), Positives = 339/643 (52%), Gaps = 18/643 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q+EAV R LLVLAGAG+GKTRV+ +R+A L++ P I++VTFTNKA Sbjct: 4 ISHLNRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAA-GVDPERILSVTFTNKA 62 Query: 67 AAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM R L+G + + + TFH +LR P+ F I D DQ ++ Sbjct: 63 AREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQESAARK 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEACDRA 184 ++ + + + P + I+ K +G+ P Q + + Y+ YQ A A Sbjct: 123 ALQVLKMTDTALKPGDLLAQISRWKMQGVMPDLAQEIADSDHEQLAGMAYRRYQLALKAA 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 G VDF +LL +L+ + P L+ + RF + +DE+QDTN +Q+ I + + Sbjct: 183 GGVDFDDLLFLTFQLFKHHPEALERQQNRFDFVQIDEYQDTNELQFRLIESIVRRHQNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA+V++I F FP A+ +RLE NYR T +I+ AN L+ +N GR Sbjct: 243 VVGDDDQSIYGWRGAEVKHILGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRH 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 K+L G + +E EA VV I E AIL+R+N Q R+ Sbjct: 303 EKRLIAHRG-GTSVVFREYPDEQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTNEQPRIF 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E L + + YRI GG FF+R+EIKD +YL+++ N DD + R++N P RGIGD T Sbjct: 362 EHELRRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPPRGIGDATC 421 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQT 481 + + + + W + + +A + L++F + + L + + + L Sbjct: 422 ERLLARAVKEKRRFWDVIPDAAAAGEITSKALNNLRQFEKQMSGLREAFKQPGVKLSETF 481 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLE--ELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 R+++ +G E+ Q + NL E A Q+ L+ +L + Sbjct: 482 LRMVETTGYAREIERTYKSAEQQEMRNLILGEFANAVSQYEAQSRS---PSLEGYLDEIS 538 Query: 540 LEAGEGQADTWQD--AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE----GGRLE 593 L + A D A+ LMTLHSAKGLEF +V++VG+EEG+ P + S+DE +E Sbjct: 539 LGGSDFAAPERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEEFENPSSVE 598 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 EERRL YVG+TRA LT+T +++R +GK+ +PSRF+ E+ Sbjct: 599 EERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEM 641 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 231/723 (31%), Positives = 382/723 (52%), Gaps = 20/723 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +L++LN Q +AV + V+AGAGSGKT+ L R A+++ + +I+ VTFT Sbjct: 3 DPILENLNPSQLQAVKTTEGYVRVIAGAGSGKTKALTSRFAYIVDRLGINSSNILCVTFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ L+G + ++ T+HG R LR + P++F ILD+EDQ +L Sbjct: 63 NKAAQEMKKRVKALIGDTYDLAFITTYHGFCVRFLREEINKIHFPKNFIILDAEDQKSIL 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDE----GLRPHHIQSYGNPVEQTWQKVYQAYQE 179 + + + ++ K +Q + +I+ QK G + +P + +++Q Y + Sbjct: 123 RDIFNELQINSKHLTFKQVLRFISKQKSTSNYLGYILENKGFEPDPSDSLSSRIFQIYLD 182 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 R +DF +L+ + + P +L +++ I VDE QD++ Q+ + +L+ Sbjct: 183 KLKRNYALDFDDLIHFTAFILDHNPDVLLKWQQNLHYIQVDEAQDSSENQFHLVEILSRV 242 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQ+IY WRGA+ E + F + FP +TI + +NYRST NIL N +I+N Sbjct: 243 HQNLFLVGDPDQTIYEWRGAKPEYLVEFDSMFPDTQTIIMNRNYRSTPNILKIGNHIIKN 302 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N R+ K + TD +G + + N+ +E++++ + IK Q A ++ ILYRSN Sbjct: 303 NTVRVDKDMITDKPEGFEVVHFHGKNDFEESQWIASEIKEILQAEQAAYSDITILYRSNH 362 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR +E+AL++ ++PY I+GG+RFFER+EIKD LS LRLI D+ +F R+ N P RG+ Sbjct: 363 LSRNIEQALIKDNIPYSIFGGIRFFERKEIKDVLSLLRLIVQ-GDNFSFLRMHNHPARGL 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G + L+ + + ++ L+L QA + +K LA + A F+ELI L + + Sbjct: 422 GKKFLERLSLLAGEQNLSLLQALERNITDKELAKKGAV---EFLELIAELRETAKTKSIS 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 ++ SGL +Y ++ E R+EN++ELV + E+ + + +L Sbjct: 479 DLVKIILDKSGLSELYRKDGDED---RLENIKELVNSMLLLEK--ENNAPVDIIEYLQEI 533 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLEEER 596 +L QD V+LMT+H +KGLEFP VF+ G EG+ PS +S+ E +EEER Sbjct: 534 SLYTDLNTDTENQDKVKLMTIHISKGLEFPYVFLCGFTEGVLPSALSVKERRARAIEEER 593 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RL YV VTRA ++ +T +E + + PSRF+ E+ +E + S Sbjct: 594 RLMYVAVTRAEKRFYMTDSEG-FNFTTGLNKYPSRFLFEIKDEFYVRKGKLSQQIIENSR 652 Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVAAYA 715 ++ ++ +K G V H + +G I ++ V F G +K + + Sbjct: 653 NHQSPGQLQENTAFKEGDFVMHPVWNKGKIQTVDLE--KKEYLVDFFDMGKVKPIDFGFK 710 Query: 716 RLE 718 L Sbjct: 711 HLT 713 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 241/669 (36%), Positives = 351/669 (52%), Gaps = 17/669 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q AV LLVLAGAGSGKTRV+V +IA L+++ I A+TFTNK+ Sbjct: 1 MHGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKS 60 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ + + G G+ + TFH L + L+ H A L + F I DS+D +K Sbjct: 61 AKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDRA 184 L+ D A I+ K+ G+ P + E+ +Y+ YQ Sbjct: 121 LMHGAKPD----AIEDAKNLISRAKNAGMSPEQAMAAARSNREKEAASLYERYQARLTTF 176 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ ++ I+ +RER +LVDE QDTN+ QY +++LAG G Sbjct: 177 NAVDFDDLIRLPVQILEANEEIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFT 236 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY WRGA EN+Q+ D+P E I+LEQNYR ++ +L AANALI +N Sbjct: 237 CVGDDDQSIYAWRGANPENLQQMGRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEH 296 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 K LW+D ADGE I ++ + EA V I ++ IL+R N QSR L Sbjct: 297 LKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPL 356 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+AL +PY + GG F ERQE+KD LS+LRLI N DDAAF R V +P R +G +L Sbjct: 357 EKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSPKREVGATSL 416 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + + + +A + + L RAA+ L F +++ + + +A +P Sbjct: 417 ARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSATLPAGELVRT 476 Query: 484 VIKDSGLRTMYEQEKGEKG--QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 + SGL + ++ Q R NL+EL DL A LS Sbjct: 477 LADKSGLLNDLRNQSKDEAGFQRRKRNLDELAEWFEGGPRGASASDLAAQLALLSR---- 532 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 D + V++MT+H++KGLEF VFIVG E+G+ P ++SL+E G L+EERRL YV Sbjct: 533 ---NDKDDGGNQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEE-GNLQEERRLLYV 588 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA Q+L ++Y++ R +G+ V +PSRF E+P ++ +R Sbjct: 589 GITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEIPAAELQRDGADPVADAERKKERANA 648 Query: 662 PMVENDSGY 670 + + + Sbjct: 649 GLAAIQALF 657 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 244/743 (32%), Positives = 391/743 (52%), Gaps = 51/743 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 DSLN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ N SP I+A+TF+NKA Sbjct: 6 FDSLNEQQKSAVIFTDGALRIIAGAGSGKTRVLTYKIAYLIENRNVSPGDILALTFSNKA 65 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R + + V TFH L R+LR+ + + P DFQILD DQ ++LK + Sbjct: 66 ANEMRDRAYGALEKTNEYPTVSTFHSLCARILRSEIHNFDYPNDFQILDESDQKQVLKIV 125 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 + + + Q+ + +I +QK+ + P + + + + +Y++YQE + A Sbjct: 126 YTELGISQAQYTFGSIISFIQNQKNNLVAPEDLLADEDSAKDPRTLIYKSYQERLNNAHS 185 Query: 187 VDFAELLLRAHELWLN--KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL+ + L+ + I + +RF +L+DEFQDT+ +QY +++LAG +G + Sbjct: 186 LDFDDLLVFVYRLFYDPKFEEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAG-SGNIT 244 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WR A + I F DFP A TI+LEQNYRST IL+AAN LI N RL Sbjct: 245 VVGDPDQTIYSWRNADINIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRL 304 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 KKL+TD +GE I YC F+E EAR + ++I + L AIL+R ++ SR +E Sbjct: 305 DKKLFTDNEEGEDIDFYCGFSEEAEARKIASKISELKRKRVQLKNIAILFRISSYSRAIE 364 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 EAL+ + Y+++G +F++R+E+KDAL+YLR+I + + + RV+N P R IG T+D Sbjct: 365 EALINENTIYKLFGSTKFYQREEVKDALAYLRVIHD-GSEISLLRVINKPARRIGTSTID 423 Query: 425 VVRQTSRDRQLTLWQACR----ELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + + S++ L L++ E+ + + L + I + +++ Sbjct: 424 KLLKFSKENNLDLFKCLDTKFNEIQKNLHIQMETLKNLASLINEIRWARRIIQGNQIYLT 483 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + ++ + E+ + R+EN L+ A + E + +L L Sbjct: 484 LKEFMINNIKYFEEYKSSEEEYENRMENFLNLIEAIHVW---ETKHPHGTIDEYLQEITL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-------------- 586 D V LMT+H+AKGLEF VF+VG+ E +FP + ++ Sbjct: 541 ITDRDVEDDAASYVSLMTIHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKFDFTYLPFE 600 Query: 587 ---------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 + LEEERRLAYV +TRA KL L+YA RR ++PSRF+ E Sbjct: 601 KEEELQKQPENIEGLEEERRLAYVAMTRARTKLFLSYAVNRRG-----LNKPSRFLKE-- 653 Query: 638 EECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 ++ T S + ++ + +G + H+ +G G I+N+ G Sbjct: 654 ------AGIKKTSSIQTASSFSQAMDIDENVNLIVGDEISHSTYGHGKILNIIGK----I 703 Query: 698 LQVAFQGQGIKWLVAAYARLESV 720 ++V F + I+ L + ++ + Sbjct: 704 IEVQFDDKKIRKLDKTHIAIKKL 726 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 221/647 (34%), Positives = 360/647 (55%), Gaps = 18/647 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + L+ +LN Q+ AV +LVLAGAGSGKT+VL RIA+L+ + P+ I+A+TFT Sbjct: 7 NPLMGTLNSSQQRAVLTTEGRVLVLAGAGSGKTKVLTTRIAYLL-QQGVDPWRILAITFT 65 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NK+A EM+ R+ + + W+GTFH + +R+L + + F ++D DQ L+ Sbjct: 66 NKSAKEMKERVTGM-DSRASKSWIGTFHSICNRILSTNIHHLGMDM-FTLMDDTDQKALV 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ--KVYQAYQEAC 181 K + L+ + + I+ K+E + P QS ++ +YQ Y++ Sbjct: 124 KTAAVQLGLEADKNIVYNLLSQISLWKNEAISPGQAQSNSTGDKEKLAVSHIYQKYEDLK 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 D+ +LLL+ L+ N P +L Y+ F +LVDEFQDTN IQ+ I +L+ G Sbjct: 184 AIHNYFDYDDLLLKTVHLFQNNPELLGRYQNLFRYVLVDEFQDTNKIQFDLIEMLSQKHG 243 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIY +R A++ENI + P + I L++NYRST NI++A+N+L+ NN Sbjct: 244 NIFLVGDADQSIYSFRSAKIENILSYQKIHPETQLILLQENYRSTQNIVNASNSLVGNNK 303 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQS 360 RL ++ ++ G+ I ++ + EA FV I + + A+LYR N QS Sbjct: 304 MRLEREAFSVSGVGDDIHVFRFNDASREADFVARMIVNMKKATQCDWKDFAVLYRMNFQS 363 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 + LE AL ++PY+I G F++R+EIKD +SY+R N DD A ERV+N P+R IG Sbjct: 364 KHLELALRDENIPYKIVGTTSFYDRKEIKDLVSYIRASHNLTDDYALERVINVPSRKIGK 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALA---GRAASALQRFMELIDALAQET--ADM 475 T++ + + +R++ + A + + + AL+ + ++ F L+ L+Q + Sbjct: 424 TTIEKIYAFAHERRIPFFVALQNIDEVAALSKINKSTVAKIKEFATLMQELSQLALVGEF 483 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 +IK + +++EK E+ +TRIEN+ L R + E +++ L F+ Sbjct: 484 SATKFMQTLIKKTDFMGQFDKEK-EEDETRIENVTHLRDYARHWDAQE--KEINSLAQFV 540 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 S L+ + + V L ++HSAKGLE+P+ F++G+E+ +FP S + LEEE Sbjct: 541 SEITLDGDSDEDEED--FVTLTSVHSAKGLEWPETFVIGLEDDVFPHYRSKQKLSDLEEE 598 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYG--KEVYHRPSRFIGELPEEC 640 RRL YV +TRA ++L LT++ + YG K + +PS F+GE+P+ Sbjct: 599 RRLMYVAMTRAGKRLYLTHSAFKYEYGSQKPIRQKPSPFLGEIPDNY 645 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 231/747 (30%), Positives = 388/747 (51%), Gaps = 49/747 (6%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN +Q+EAV A LV+AGAG+GKT VL RIA+L++ +N P I+ TFTNKAA Sbjct: 8 SRLNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTNKAA 67 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+G+ +G S ++ TFH + ++L+ N + +I+D++DQ LLK + Sbjct: 68 DEMKERVGKTIGVSI--PYLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEIF 125 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP---------VEQTWQKVYQAYQ 178 +N+++K ++ + I+ K++ + + + N Q +Y+ Y Sbjct: 126 DQLNIEKKSQVIKKIIKTISKVKNKFFDQNDMLNEKNHKYLELVDLNDAQRLVDIYKIYC 185 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C + VDF +L+ H+L++ P +L+ ++ +F ILVDEFQDTN IQY I LLA Sbjct: 186 DRCFKLNYVDFDDLINLTHKLFIEFPEVLEKWQNKFDYILVDEFQDTNKIQYDLISLLAT 245 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQ IY +RGA+ I F +F + L+ NYRST IL+ AN LI+ Sbjct: 246 KHQNLFVVGDPDQMIYSFRGAEQWIINNFSQNFKNTKVTILKTNYRSTQPILNTANRLID 305 Query: 299 NNNGRLGKKLWTDGA-DGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN K L D N +DEA ++ +I+ + G + A+L+RSN Sbjct: 306 ANNNNYKKNLTAFNTNDNNLPIYLRGQNPIDEANWIARKIRELLEEGTPANQIAVLFRSN 365 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 SR +E+++++ S+PY I G +F+ER EIKD ++YL+++ N D+ +F R++NTP R Sbjct: 366 HYSRTIEQSMMRESIPYTILGSKKFYERAEIKDMIAYLKVV-NDLDELSFLRIINTPRRA 424 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T + V+ + + L L++A E+ + + + F+ LI + E D+ + Sbjct: 425 IGPTTFEHVKHYAINNNLFLFEALAEVEKNHLINNTQKKNILNFVNLIKEIRDEMEDLKI 484 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 H + + K + EK + +I+N+ EL A + + D+ + +L+ Sbjct: 485 HEILELIYKKVNYEAYLLE--NEKAEDKIDNVYELKRAMKMYVDRHPDD---TINDYLNS 539 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEE 595 AL + D+ ++ V LMT+H++KGLE+ VF+ GM EG+ PS ++++ +EEE Sbjct: 540 IALYLNKDGKDSKEN-VLLMTVHNSKGLEYENVFVAGMNEGLLPSDRAINDDPIKGVEEE 598 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL----------------PEE 639 RR+AYV +TRA + L ++ A + SRFI E+ PE+ Sbjct: 599 RRIAYVALTRAKKNLYISSACCYDPLARRQVFE-SRFINEIGFNNLKIINSSFKNNKPED 657 Query: 640 CVEEVRLRATVSRPVSHQRMGTPMVEND------SGYKLGQRVRHAKFGEGTIVNMEGSG 693 + L+ R + VE++ + +++G+R+ H FG+G I+ ++G Sbjct: 658 MPLKSFLKQQEERSWFDSKQKQKEVEDNFYQTMKNDFEIGERIVHTSFGDGVIIGIDGD- 716 Query: 694 EHSRLQVAFQGQ-GIKWLVAAYARLES 719 L +AF K + + + Sbjct: 717 ---ILTIAFSKYRQPKQINFNHKTIVR 740 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 234/688 (34%), Positives = 342/688 (49%), Gaps = 42/688 (6%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LN Q EAV LVLAGAGSGKTRV+ +IA L+ + P I AVTFTNK Sbjct: 154 MSAGLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEAKGFEPRHIAAVTFTNK 213 Query: 66 AAAEMRHRIGQLMGTS-------------QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQ 112 AAAEMR R+G+L+ + V TFH L ++LR L F Sbjct: 214 AAAEMRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGVQILRQEAEHVGLKPQFS 273 Query: 113 ILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQ 171 I+DS+D +++ I + R+ I+ K+ + P + N E Sbjct: 274 IMDSDDCFGMIQEQIGT----TDKGLIRKIQTIISLWKNGLVTPEEAMTIAANEDEHQAA 329 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 VY+ Y VDF +L+ EL+ + ++ R +L+DE+QDTN QY Sbjct: 330 LVYRNYVATLHAYQAVDFDDLIRLPTELFAKNEPVRDRWQNRLRYLLIDEYQDTNACQYE 389 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 ++LLAG VGDDDQ+IYGWRGA +EN+ + DFP I+LEQNYRST IL+ Sbjct: 390 LLKLLAGPRAAFTAVGDDDQAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILT 449 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAEC 350 AAN +I NN KKLW++ G+ I++ +E EA VV R+ + + + Sbjct: 450 AANNVIANNPKLFEKKLWSEHGMGDSITVTPCNDEEHEAESVVFRLSAHKFERRTQFRDY 509 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR N Q+R+ E+ L + +PY + GG FF++ EIKD +YLRLIAN +DD AF R Sbjct: 510 AILYRGNFQARIFEQVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRA 569 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 V TP RGIG+ TL+ + + +++L++A E L+ R L+ F + I L Sbjct: 570 VTTPRRGIGNTTLEALGAFAGQAKVSLFEAVYMGGIEARLSARQIEPLRIFCDFIQRLTD 629 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGE-KGQTRIENLEELVTATRQFSYNEEDEDLM 529 P V D +++ E + QT+ +N+ E + ++ E ++ + Sbjct: 630 RADKEPATVVLDDMMEAIHYEAYLYDAYDERQAQTKWQNVLEFLEWLKRKGTKPEPDEAV 689 Query: 530 P------------------LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVF 571 L + AL + + DAV+L T+H++KGLE+P VF Sbjct: 690 DGEAEGFHNADGLADTGKNLLGLIQTVALMSMLEGKEEDPDAVRLSTVHASKGLEYPHVF 749 Query: 572 IVGMEEGMFPSQMSLDEG----GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 +VG+EEG+ P D+G R+EEERRL YV +TRA + L L + + R+ + + Sbjct: 750 LVGVEEGIMPHSGGSDDGPIDDERIEEERRLMYVAITRAQRSLHLNWCKKRKRARETIVC 809 Query: 628 RPSRFIGELPEECVEEVRLRATVSRPVS 655 SRFI E+ + P Sbjct: 810 EQSRFIAEMGLDEAPPPTPEEAPMTPKD 837 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 240/656 (36%), Positives = 359/656 (54%), Gaps = 24/656 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN Q EAV LV+AGAGSGKTRVL +++A L+ P+ +MA+TFTNKAA Sbjct: 6 KELNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLEE-GYDPHKLMALTFTNKAA 64 Query: 68 AEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EM R+ ++G+ M +GTFH + R LR + +F I D+ D L+KR+ Sbjct: 65 REMLSRVESMVGSRDTFRMKLGTFHSVFSRYLRIYAPLLGFTPNFSIYDTSDSKSLVKRI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VYQAYQE 179 +K M LD K + P+ + I+ K+ + P + G E +++ VY AY Sbjct: 125 VKDMALDPKFYTPKLVLGRISHCKNNLITPEGYAAGGEYAEYDYRRGVPMLHSVYAAYVA 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C +A +DF +LL + L + P + +L+DE+QDTN QY R L Sbjct: 185 QCRQANAMDFDDLLYYFNILLRDHPEVQAECAASVDYLLIDEYQDTNPSQYLIARRLVEA 244 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 ++ VGDD QSIY +RGA ++NI F + FP A +LE+NYRS+ I++ AN+LIE+ Sbjct: 245 KQRIFAVGDDAQSIYSFRGASMQNILTFTHTFPSARLFKLEENYRSSQRIVALANSLIEH 304 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI--KTWQDNGGALAECAILYRSN 357 N R+ K ++++ A GE I LY + EA+ VV I + + + + AILYR+N Sbjct: 305 NVHRIKKDVFSNRAKGEKIDLYEMESGYREAQHVVESIYKRYCKHSETSYGSFAILYRTN 364 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+ E+ L QA +PYRIYGG+ F+ R EIK+ L+YL+LIAN +++ AFER P +G Sbjct: 365 AQSRLFEDQLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIANPHNNEAFERAAKYPRKG 424 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKA-LAGRAASALQRFMELIDALAQETADMP 476 IGD+TL ++R + D + +L+ A L+ L+ A + L ++ELI + Sbjct: 425 IGDKTLSLIRTEAADNKTSLFAAAESLIARPDTLSSTARTKLTAYLELIRDITYNPEAKT 484 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE-------EDEDLM 529 L ++ S + + +G T++EN+ E V+ ++F E + Sbjct: 485 LVEWVQSILLRSQILDTLRADTSIEGHTQLENVNEFVSGVQEFEDETSADGLFFERGETT 544 Query: 530 PLQA----FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 L FL L + DAV LMT+H+AKGLEF V+IVG+EEG+FPS +S Sbjct: 545 SLHDLLVLFLQGVTLITDNLETGENADAVHLMTIHAAKGLEFDHVYIVGLEEGLFPSMLS 604 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +E E ERRL YV +TRA + ++++A R + G Y PSRF+ +L + Sbjct: 605 AEEENIEE-ERRLLYVAITRAKEYCSISFARYRAINGMTEYMIPSRFLRDLDMRYL 659 Score = 73.3 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 38/74 (51%) Query: 647 RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 + + P S ++ + + + +G V+H FG G + ++ GE+S++QV F G Sbjct: 734 KRAIPIPYSQRKAPKGAPKGVTKFSIGDIVQHPTFGRGVVTSVLDKGENSKIQVNFDTAG 793 Query: 707 IKWLVAAYARLESV 720 K ++ +A L+ + Sbjct: 794 EKTILIRFASLKKL 807 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 686 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 229/659 (34%), Positives = 335/659 (50%), Gaps = 32/659 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + LN Q +AV + LVLAGAGSGKTRV+ H+IA ++ + P I A+TFTNK Sbjct: 88 MSAGLNLAQLQAVHYTQGACLVLAGAGSGKTRVITHKIAHMIE-QGLEPRRIAAITFTNK 146 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAAEMR R L+G + V TFH L R++R L F I+D++D +LK Sbjct: 147 AAAEMRERAKGLIGRRAKDVLVCTFHALGVRMVREDGAVLGLKPQFSIMDADDVAGILKD 206 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRA 184 RQ W I+ K+ GL + + E++ V Y+E Sbjct: 207 A---AGGTTDLATARQWQWTISKWKNMGLSSEQALAQAADDNERSIAVVMARYEERLAAY 263 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ L + P + ++ ++LVDE+QDTN QY ++LL G+ G Sbjct: 264 QSVDFDDLISMPLRLLRDHPEVRAKWQALLGHVLVDEYQDTNATQYELLKLLVGERGHFT 323 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIYGWRGA ++N+++ DFP + I+LEQNYRSTS IL AAN +I N Sbjct: 324 AVGDDDQSIYGWRGATLDNLKKLPQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLF 383 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE---CAILYRSNAQSR 361 K L+++ +GEP+ + A E EA V RI++ + + AILYR+N Q++ Sbjct: 384 PKTLFSELGEGEPVRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAK 443 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 E+AL +A++PY++ GG FF+R EIKD ++ RL N +DD AF R + P RGIG Sbjct: 444 PFEKALRRANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNPKRGIGHT 503 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD----MPL 477 TL + + + +++ A + A+ RA L F I+ L Sbjct: 504 TLAALGAFATQHKQSMFGALFNGMLPAAVPKRALDGLHEFGRYINDLEHRARHTHGAEDA 563 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDL------- 528 +K+ G + + R N+ E Q + + D+ Sbjct: 564 RAFLADWLKEIGYEQHLYDGEDSEKVAAARWSNVMEFCDWMAQRAGGQIDDTAGAVVARE 623 Query: 529 -MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L AL + + + QD V L TLH++KGLE+P V +VG+ EGM P ++ D Sbjct: 624 TKSLLEVSQTIALLSTISEREKEQDMVTLSTLHASKGLEWPHVVLVGVTEGMLPFKLDDD 683 Query: 588 EG----------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 EG RL+EERRL YVG+TRA + L +++ + R+ + V +PSRFI E+ Sbjct: 684 EGRQQKVTDDTLQRLQEERRLMYVGITRAQRTLAVSWTKKRKKGREMVAAQPSRFIAEM 742 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 230/717 (32%), Positives = 373/717 (52%), Gaps = 44/717 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + + LN+ Q +AV +L+LAGAGSGKT +V R+A+L+ + + +TF Sbjct: 1 MEKIFEKLNNSQTDAVKQTEGPVLILAGAGSGKTTTIVSRLAYLIEGIGIPASNTLTLTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R +M + TFH L+ + +F ++DS+D+ R+ Sbjct: 61 TNKAAKEMRERASNMMSNLAYPPLLCTFHKFGLLFLKFNIHLLGRQNNFVVIDSDDKKRI 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEAC 181 +K++ + I+ K+ L P Q K+Y+ Y+ Sbjct: 121 IKKI-------NSELATPLIASEISRYKNSLLTPDDAYKQAEFFNYQQIAKIYEEYENYL 173 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 LVDF +L+ +L P + + +++ I+VDE+QDTN +Q ++ L Sbjct: 174 LENNLVDFDDLIALTFKLLDENPELARTTSDKYRYIMVDEYQDTNELQLKLLQKLCSTHN 233 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIYGWRGA + NI F DF G +LE+NYRS IL ANALIE+N Sbjct: 234 NICVVGDDDQSIYGWRGAHIRNIMEFDQDFIGTSVFKLEENYRSREPILKVANALIEHNR 293 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 RLGKKL GE I++ + +E +EAR + ++ D+G + A+LYR N SR Sbjct: 294 SRLGKKLIPTRGGGEDITILNSSDENEEARKIATKVNKLLDSGVKAEDIAVLYRVNVLSR 353 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E+ L +A + Y++ GG+RF++R EIKD +SYLR+I N +DD +F+R+VN P RG+G Sbjct: 354 SIEDGLNRAGIAYKLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKPKRGMGKA 413 Query: 422 TLDVVRQTSRDRQLTLWQACRELL---QEKALAGRAASALQRFMELIDALAQETADMPLH 478 ++D + + + ++++ ++ E + + A L++F++ I ++A A + Sbjct: 414 SVDKIELAAHANETSIFEYIEKIAITDLETLVKSKNAKTLKKFVKDIRSVA-NAAKESTY 472 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 D + L+ +Y+ E R+ N++E R F N L FL+ Sbjct: 473 NFIDILEDTFHLKDIYKGLPDEV--ERVLNMDEFYGLFRDFIKNSPS---ASLDEFLNEL 527 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L++ + Q + D++ +M++H++KGLEF +FI+G+EEG P + +G LEEERRL Sbjct: 528 TLQSEQDQVE--GDSIYMMSIHASKGLEFDHIFIIGLEEGFLPL---VGDGSDLEEERRL 582 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV TRA LTL++ ++R G+ + SRF E + Sbjct: 583 GYVSFTRAKDTLTLSHVDSRFYKGRRSDLQKSRFFNE-------------------AGLC 623 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW-LVAAY 714 G+ +VE ++ +K G VRH FG G + + SG +L + F G K ++A++ Sbjct: 624 EGSLIVEKNTAFKKGDLVRHKIFGTGRVNGVSKSGREFKLNINF--AGTKRDILASF 678 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 683 bits (1764), Expect = 0.0, Method: Composition-based stats. Identities = 241/746 (32%), Positives = 399/746 (53%), Gaps = 46/746 (6%) Query: 6 LLDSLNDKQREAVAAPRS-NLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + DS N+KQ EA+ AP L+V+AGAGSGKT VL +R +L++ N I+ TFTN Sbjct: 5 IYDSFNEKQYEAITAPDDVPLMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTN 64 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQ---DFQILDSEDQLR 121 KAA EM+ RI +++ ++GTFH + R+LR + N+ + +F I+D +DQ Sbjct: 65 KAANEMKDRITKVIPNRSFK-YIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNS 123 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGL-RPHHIQSY---------GNPVEQTWQ 171 +LK + K N D++ + + +I+ K + + + + + G + + Sbjct: 124 ILKEIYKLNNFDKQILNYKVCLSWISKLKSDNIYDANDVYEWLSFLDNTYDGKVKKDIFA 183 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 VY+ Y L+DF +L+ A + I ++ RF ILVDEFQDTN QY Sbjct: 184 AVYEGYINFLRDGNLLDFDDLIKYARRVL-EIEEIRTKWQNRFDYILVDEFQDTNYDQYQ 242 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I+LL+ + + VGD DQ IY WRGAQ + F DF + TI LE+NYRST NIL+ Sbjct: 243 IIKLLSKNFKNIFAVGDPDQMIYSWRGAQENIFEVFKKDFSDSLTIVLEKNYRSTKNILN 302 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAEC 350 AN+LI+ N R+ K L+TD + I + A ++ E++FV RIK D + Sbjct: 303 IANSLIQKNKNRIKKNLYTDSSTESEIIYFEADDQNLESKFVCTRIKDLVDSKKYNYKDI 362 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+N SR +EE L +PYRI+GG +F++R+E+KD ++Y++LI N +D+ + R+ Sbjct: 363 AILYRANYLSRNIEEFLSNYRIPYRIFGGFKFYQRKEVKDIIAYMKLIVN-SDEVSLTRI 421 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 NTP R I + T ++ + ++ + A + + + + + R +A++ F + + + + Sbjct: 422 YNTPRRQISEATYFKIKNYAVLNNISTFAAFKFVDEIEGIQTRTKNAVKAFYDSMIEIRE 481 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + + D +++ + M +++ E R EN+ EL A++ F N + Sbjct: 482 K-KYGSISEMIDDIVEKTKYYEMLKEDGEEH---RTENIIELKNASKNFEQNNPGSN--- 534 Query: 531 LQAFLSHAALEAGEGQADTW---QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 + +L AL + + QD+V LMT+H++KGLEF VFI+ E +FPS SL+ Sbjct: 535 INFYLQELALLTSNDEEENQKNKQDSVSLMTVHASKGLEFKIVFIIQFNENIFPSIRSLE 594 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRL 646 E G L+EERR+AYV +TRA + L ++ +G +E+ PSRFI E+ + +E+ + Sbjct: 595 E-GNLDEERRIAYVAITRAKENLYISCCNGTSFFGNREMEREPSRFISEIGDALIEKRLI 653 Query: 647 RATVSRPVSHQRMGTP----------MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 ++ + + E++ Y +G+ + H KFGEG ++N+ G+ Sbjct: 654 TKNQTKFKASTQFNNSNNGSKVDHSKFHESEKTYYVGELIIHDKFGEGIVLNVSGN---- 709 Query: 697 RLQVAF--QGQGIKWLVAAYARLESV 720 + V+F G K + + + S+ Sbjct: 710 IIDVSFKNPQYGKKSFLKQHVSIRSL 735 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 683 bits (1763), Expect = 0.0, Method: Composition-based stats. Identities = 248/732 (33%), Positives = 380/732 (51%), Gaps = 23/732 (3%) Query: 1 MDVSY--LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIM 58 M+ S LLDSLN Q+ AV S L ++AGAGSGKTRVLVH+IA+L+ N PY I+ Sbjct: 1 MEKSEKNLLDSLNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQIL 60 Query: 59 AVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 AVTFTNKAA EM+ RI L+ + + TFH L +LR P++F ILD D Sbjct: 61 AVTFTNKAANEMKERIKTLVDNHESEPLISTFHALCVYILRRDIDVLKYPKNFTILDVAD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAY 177 Q +LK + + ++++ + YI+ K +++ N + + K+Y Y Sbjct: 121 QFDILKNIYEKFDINKIDITLTSMINYISFHKINKTPIEVLETEDNSEDDRIKLKIYLEY 180 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 E + L+DF +LLL+ EL+ P I + RF ILVDEFQDT+ IQY I+ LA Sbjct: 181 NEILKKLALLDFNDLLLKTQELFEKFPEIKLKWSRRFKYILVDEFQDTSPIQYEIIKTLA 240 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + IVGD DQ+IY WRGA V I F DF A+TI L NYRST IL AN+LI Sbjct: 241 QNH-NLTIVGDPDQTIYSWRGANVNLILDFHKDFENAKTINLNLNYRSTEKILKHANSLI 299 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRS 356 N RL K L G+ + + A + EAR+VV++IK L+E +I+YR+ Sbjct: 300 HFNKKRLEKDLVAYTKQGQEVIFHHALSPELEARWVVDKIKWLISIEKAKLSEISIIYRA 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N S+ E+ALL+ S+ ++++GG +F+ER EIK+ALSY++L+ + +D AF+R++N P R Sbjct: 360 NFYSKNFEDALLRESIHHQVHGGEKFYERSEIKNALSYIKLLVSDSD-LAFQRILNIPQR 418 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 IG+ + + + L+++QA L++ ++ L + I+ + + Sbjct: 419 SIGNIYRNKILDYCDESNLSIFQAINNHLEDLPVSSNIREKLFDLIFKINKYQKIINENN 478 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + V D D E K +++N++EL+ + N + Q + Sbjct: 479 VQVSVDEFFADIKYYDYLANEDTFKN-GKVDNVKELLIIISNWFRNNPKK---TFQDYFE 534 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLE 593 +L Q D ++ V LM +H+ KGLEF VF+VG+ E + PS+ +L+ + LE Sbjct: 535 EISLVPNASQEDD-KNTVSLMNIHNCKGLEFSYVFLVGLSEEILPSKKALENDFDDSNLE 593 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRLAYV +TRA + L LT ++ + + SRFIGE+ E + Sbjct: 594 EERRLAYVAITRAKKMLFLTDSDGYLFGNFKTQKKTSRFIGEMGIVLENENQKTMEQYMN 653 Query: 654 V----SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIK 708 + N+ +G ++ H FGEG ++ ++ V F + K Sbjct: 654 SVLLNKQVDLMKDYQTNNDDIFVGDKIVHKVFGEGIVL----EESLGQITVLFTNKKQPK 709 Query: 709 WLVAAYARLESV 720 L+ +A + + Sbjct: 710 TLLKNHASISKI 721 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 248/741 (33%), Positives = 385/741 (51%), Gaps = 38/741 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 V+ ++SLN QREAV + ++AGAGSGKTRV+ ++IA+L+ N P+ I AVTF Sbjct: 2 VNEFIESLNPNQREAVLRITGPVRIIAGAGSGKTRVITNKIAYLIKYANLQPWRICAVTF 61 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKA EMR RI +++G S + T+H L R+LR + N + F I+D DQ + Sbjct: 62 TNKATNEMRTRIVEMIGNSGQRCMIATYHALCVRILREDIIHLNYDRYFNIIDMADQDSI 121 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 ++ + K + + + +I+ K++ + P+ ++ N E W +VY Y++ Sbjct: 122 IRNIYKRLPMKYDAQEAKMVKNFISKLKNDFISPNSAKTSVNGDEMRWAEVYDTYEKRLR 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 VDF +L+L ++L+ N +L+ ++ RF LVDEFQDTN +Q+ I+ L GD Sbjct: 182 EINSVDFNDLILLTYKLFKNNGEVLKKWQNRFDYFLVDEFQDTNELQFDIIKWLVGDNSN 241 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRGA++ I F FP +TI L +NYRST +ILS AN LI +N Sbjct: 242 ITIVGDPDQTIYSWRGAKINLILNFDKYFPHTQTIVLNENYRSTQSILSLANNLIIHNKN 301 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSR 361 R+ K L+T A G+ LY N DE+ FV +IKT ++ + ILYR+N SR Sbjct: 302 RIEKNLFTIKASGQLPILYHGANSSDESDFVARKIKTLIKEENYDYNDILILYRANYLSR 361 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 LE AL + YRI+G +F+ER+EIKDAL++L++I N ND A ER++ + IG + Sbjct: 362 DLETALADYGISYRIFGAFKFYERKEIKDALAFLKIIMN-NDFLAIERILLLIPK-IGPK 419 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFME-LIDALAQETADMPLHVQ 480 T + + Q +D+Q+ + L +L + E ++ ALAQ + Sbjct: 420 TFEQIMQILKDQQIMFTTLLEQHFD--LLPLNLQHSLNKVREAIVLALAQLPTVKSIESL 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS-YNEEDEDLMPLQAFLSHAA 539 ++ +G E+ + N+ EL+ + +F N+E L +L + Sbjct: 478 LVLLLDKTGYLQRLRDNYEEEREE---NILELIASIGKFDQQNKELAGTELLSEYLQLIS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRL 598 L+ + + + LMT+H+AKGLE VFIVG+ EG+FP+ ++ G +LEEERR Sbjct: 535 LQTDSD--NLTDNTISLMTIHNAKGLEKKVVFIVGLNEGIFPTTQAIKMGTEQLEEERRA 592 Query: 599 AYVGVTRAMQKLTLTYAETR-RLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 YV +TR+ + L ++YA+ + G E + SRFI EL + E+V S+P S Sbjct: 593 LYVAITRSEELLFISYADGYSYITGNERFE--SRFIKELDNDFYEKVNSERLFSKPKSIT 650 Query: 658 RMGTPMVENDSG-----------------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQV 700 E S +K+ V H FG G +V + +Q+ Sbjct: 651 ISYNNKSEKQSRTVFNLNKNIESTFKTNLWKVNDTVSHELFGIGVVVKIIAQN----VQI 706 Query: 701 AFQG-QGIKWLVAAYARLESV 720 F +K + ++ V Sbjct: 707 VFPHPYNVKIISVDSQAIKKV 727 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 680 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 236/652 (36%), Positives = 365/652 (55%), Gaps = 12/652 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L LN Q EAV+ + LLV AGAGSGKTRV+ +RIA ++ I+A+ Sbjct: 1 MSLTGPLMKLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +FTNK+A EM R+ +++ + G+ + TFH L ++L+ H + F + + DQ Sbjct: 61 SFTNKSAKEMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 + L+K+ LD K+ PPR+ + I+ K+ + P + +++ Y++ Sbjct: 121 EAFVSDLLKSKRLDPKKVPPREILRRISYAKNTQVHPKD-NGLTGEFDLVAAEIFPLYED 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +DF +L+L L P I +Y+ + LVDEFQDTN +QY ++ L G+ Sbjct: 180 GLKEKNAIDFDDLILLPKRLLAEFPEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGN 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + + +VGDDDQSIY +RG+ V+ I F +FP A+ +RL +NYRSTS I+ AAN+LI+N Sbjct: 240 SDNLCVVGDDDQSIYAFRGSNVQLILNFEREFPHAKVVRLLENYRSTSLIIQAANSLIQN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N GR K L++ E + Y +E +EA FV RI+T N E AIL+R+N Sbjct: 300 NIGRKEKTLYSRIPSAERVEYYETADEREEAIFVAGRIQTLLIKNEFKGKEIAILFRTNF 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EE L S+PY++ GG FF+R+EI+D +SYLR +AN DD + R++N P RGI Sbjct: 360 QSRPFEEELRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYPKRGI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKAL----AGRAASALQRFMELIDALAQETA- 473 G T+ +++ + +L+L++ ++++ + + +F+E++DA ++ A Sbjct: 420 GPGTMQKLQEEAFTHKLSLYEIFHKMIESPDYLPEVKAKVRQEIYQFVEMVDAFKKKFAM 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKG--QTRIENLEELVTATRQFSYNEEDEDLMPL 531 L +I G E+ E+ + RI NL ELV F E E + Sbjct: 480 SQKLAPVLREMITQIGFEREISMEETEEKVVKARIYNLSELVNMLSFFEEEEGREGKATI 539 Query: 532 QAFLSH-AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM-SLDEG 589 FL L E + D VQL+T+H +KGLE+ VF+VG+EEG+ P+ +EG Sbjct: 540 FDFLQRLVLLMEDEPKEDEEDRRVQLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEG 599 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 ++EERRL YVG+TR +KL LT A TRR +G+++ PSRF+ EL ++ V Sbjct: 600 EVVDEERRLLYVGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAV 651 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 207/522 (39%), Positives = 317/522 (60%), Gaps = 3/522 (0%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L++LN +Q EAV LLVLAGAGSGKTRVL +RIA ++ +P+ I+A+TFTNKA Sbjct: 5 LETLNPEQHEAVMTTEGPLLVLAGAGSGKTRVLTYRIAHMIEDLGVAPWEILAITFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 AAEMR R+G L+G + GMWV TFH + R+LRA+ ++F I +D RL+K + Sbjct: 65 AAEMRERLGALVGPAARGMWVSTFHSMCVRILRANAEVIGFTKNFTIYADDDSKRLIKDI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAG 185 + +++D K++P I+S K+E + P Q +P+ +VY Q+ +A Sbjct: 125 MAQLDIDPKRFPVNALRNRISSAKNELILPDAFDQRASDPIALVAARVYHELQKRLHQAN 184 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL+ L+ + P++L+ Y+ERF +LVDE+QDTN+ QYA LLA +M+ Sbjct: 185 AFDFDDLLMYTWLLFKHHPNVLEAYQERFRYLLVDEYQDTNHAQYAITTLLAARHKNIMV 244 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA + NI F D+P T++LE+NYRST+ IL AANA+I +N R Sbjct: 245 VGDDDQSIYSWRGADIRNILEFEQDYPQTRTVKLEKNYRSTATILDAANAVIAHNVNRKS 304 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+L G G+ I +Y A +E DE R++ I+ G + + A+ YR+NAQSR+LE+ Sbjct: 305 KRLVPTGDTGDKIHVYMASDERDEGRWIAGEIERRHTQGTSYNQIALFYRTNAQSRMLED 364 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG T+++ Sbjct: 365 MLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDMAAKRVINVPRRGIGKTTIEL 424 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + T +A + + ++++ +AL +F L+ A T + L + ++ Sbjct: 425 IDACAARNNCTFLEAAQLTIADESVRLSTRTALGQFTSLLSEAATWTGE--LRRIVEMIL 482 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 + SG+ E ++ R+EN++E + +F+ + ++ Sbjct: 483 ERSGMVRALENSGTDEDLGRVENIKEFLGVVDEFTATHDADE 524 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 42/229 (18%) Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L F+ AL AV LMT+H+AKGLEF VF+ GMEE +FP S+++ Sbjct: 616 SLADFIEWVALRTDLDTMSDDGTAVTLMTVHAAKGLEFDCVFVAGMEETIFPHMNSINDA 675 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 +EEERRLAYV +TRA ++L +T A R+L+G+ + SRF+ E+P E L + Sbjct: 676 TGVEEERRLAYVAITRARKQLYITCASNRKLFGQTQANPTSRFLAEIPAELRHTSGLGSA 735 Query: 650 VSRPVSHQRMGTPMVENDS-------------------------------------GYKL 672 ++ G+ + S + Sbjct: 736 GFSGTGWEKRGSRRGISGSGAEAGHGRVFGTSSASGSSSRKRTPTAAAHRKEAAGMSFAK 795 Query: 673 GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVAAYARLESV 720 G V H FG G ++ ++G L + F G +K L+ YA + + Sbjct: 796 GDTVDHKVFGRGKVIKVDGD----TLSIRFAKTGSVKKLLKDYAPIVKI 840 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 242/646 (37%), Positives = 358/646 (55%), Gaps = 29/646 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LD LN KQ EAV N L+LAGAGSGKTRVL +IA+L+S + SP I+AVTFTN Sbjct: 8 NVLDGLNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTN 67 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHM---DANLPQDFQILDSEDQLR 121 KAA EMR R+ +L+G S G+ + TFH LR + ++D DQ R Sbjct: 68 KAAGEMRQRVERLLGGSLHGIRICTFHSYGLNFLRRNEEIMRRMGYATPLVVIDRSDQKR 127 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 LLK L+K N+DE++ P M ++ K EG + + Q++++AY+ Sbjct: 128 LLKLLLKENNVDERRVDPSWLMEAFSAAKGEGNGSAYFRGEA-------QRLFEAYEAKM 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 G +DF +L+ ++ L+ + +LVDE+QD N QY ++ L+ Sbjct: 181 RSQGALDFDDLIHLPLKILSTHREALERELDSIEWVLVDEYQDVNRSQYMLLKRLSSRGQ 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + ++VGD DQ+IYGWRGA V I F DF GA+ LEQNYRST +IL AN +I N+ Sbjct: 241 RTVVVGDPDQAIYGWRGADVSMILNFDKDFQGAKVTVLEQNYRSTGHILEGANCVIARNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT + GE I + A N+ +++R +V+ I Q G AL + AILYR NA SR Sbjct: 301 DRPKKNLWTAASRGEKIRILKARNDEEDSRCLVDWILELQGEGYALKDMAILYRVNALSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 + E+ L++A +PYR+ G+ F++R+EIKD L+ +RL D +FER+VN P RGIG + Sbjct: 361 LYEQRLIEAGIPYRVIRGLGFYDRKEIKDVLALMRLAIQPRDLVSFERMVNVPQRGIGAK 420 Query: 422 TLDVVRQTSRDRQLT----LWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 + + + + W++ E + L GRA ++ L + + Sbjct: 421 STEALWAWMGQLEAQDPGEFWRSVLE--GDAPLKGRAREGIRALAR--GMLGILSLRGNI 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + ++++ G E+E + R++N+EEL++ + + LS Sbjct: 477 RLAVRYILEEYGYGEHLEREDQSTFEERLQNVEELMSVLPE----------GSIDDVLSE 526 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + A + D V L+TLH+AKGLEFP VF+VG+EEG+FP+ ++ LEEERR Sbjct: 527 VALFSDADVA-SGDDRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCREDRSLLEEERR 585 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 L YVG+TRA ++L L+ A R L+G + + SRF+ E+P CV E Sbjct: 586 LFYVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEIPSSCVVE 631 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 676 bits (1746), Expect = 0.0, Method: Composition-based stats. Identities = 230/742 (30%), Positives = 376/742 (50%), Gaps = 37/742 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +Q+EAV + L ++AGAGSGKTRV+ +IA+L+ E +P+ I+ +TFTNK Sbjct: 1 MLSNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R +++G + + TFH L + +L+ P++F+I+D D+ ++LK Sbjct: 61 AAREMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFEIVDESDKKQILKG 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLR---PHHIQSYGNPVEQTWQKVYQAYQEACD 182 + + + K A YI K + + + +Y+ Y Sbjct: 121 IYLELAITTKDVSIWDAFDYIAKMKKNKYFSSIEEELDNENEEDLALLKNIYKGYVSYLK 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + L+DF +L++ +EL+ + Q + ++ +LVDEFQDT+ IQY +++LA Sbjct: 181 KQSLLDFDDLIILTYELFSSSDLTRQKWASKYDYVLVDEFQDTSFIQYEIVKVLAS-NKN 239 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRG+ + F DF +TI EQNYRST NIL AN LI+NN Sbjct: 240 ITIVGDPDQNIYSWRGSDFRIMLNFDKDFENTKTINFEQNYRSTPNILEIANKLIKNNKN 299 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R+ K L++ A G +N EA+++V +I ++ AI R+ SR Sbjct: 300 RMEKNLFSTSARGADPLFLTKYNNKLEAKWIVEKIIELSQQ-TKYSQIAIFTRTAKYSRD 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE L Q S+PY IYGG RFFER+ +KD L+YLRLI N + + +F RV+NTP R IG +T Sbjct: 359 LEEELFQNSIPYVIYGGTRFFEREIVKDLLAYLRLINN-SSEVSFIRVINTPRRSIGPKT 417 Query: 423 LDVVRQTSRDRQLTL-WQACRELLQEKALAG-RAASALQRFMELIDALAQETA-DMPLHV 479 L+ + + ++ ++ L K L + L++F++ I + D + Sbjct: 418 LEKIITLASEKGYEKSFEFLENLYINKNLQSFFSLKDLEKFIQAILEARESLKNDQKIAY 477 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +++++ ++ ++ ++ ++++L + ++ EE+ + L +L+ + Sbjct: 478 VLEKLVEKIDYKSFCIFDRNKRKDQVDFDIDQLYES---IAFWEEENPELLLDDYLNEIS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL---DEGGRLEEER 596 L Q + D V +MT HSAKGLEF VFI G+ E FP +SL D +EEER Sbjct: 535 LLTSGDQ-NENSDQVSIMTAHSAKGLEFDYVFITGLAEKHFPHFLSLKSNDYDDEIEEER 593 Query: 597 RLAYVGVTRAMQKLTLTYAETRRL--YGKEVYHRPSRFIGELPEECVEEVRLRAT----- 649 RL YV VTRA ++L LT T ++ SRFI E+ + R + Sbjct: 594 RLCYVAVTRAKKQLFLTAPLTLYWARDREKEELEISRFIEEMGLASSQNYEKRFSHKSLN 653 Query: 650 -----------VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 VS + + +++ K+G ++H FG G +V E H ++ Sbjct: 654 DTDSYYQNSDYVSFDWKEKFVEQNYAKDNQEIKVGDLIKHDHFGVGKVVKEEDEIIHVKM 713 Query: 699 QVAFQGQGIKWLVAAYARLESV 720 +GIK + + + + Sbjct: 714 N---DHKGIKTFIKNHKSISKL 732 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 251/721 (34%), Positives = 374/721 (51%), Gaps = 48/721 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D S L LN +Q A +L+LAGAGSGKTR + ++IA L+S ++AV Sbjct: 10 VDDSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHKIDSNRVLAV 69 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAH----------RLLRAHHMDANLPQD 110 TFTNKAA EM+ RI +L+ + W+GTFH + +++A + Sbjct: 70 TFTNKAAREMKDRIQKLLNCRKPFTWMGTFHSVCLKLLKLCLAKESVIKALGGKW-FDAN 128 Query: 111 FQILDSEDQLRLLKRLIK-AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP---- 165 F I D +DQ R+LK ++K + D ++ I+ K+ L + P Sbjct: 129 FSIYDDDDQKRILKEILKDDLGDDYDVNELKKVHSAISRFKNTVLYKNDKAVLQTPDVAA 188 Query: 166 ------VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 E+ + Y AYQ+ + +DF +LL + P++ + RERF ++V Sbjct: 189 LNAEFADEERKARYYAAYQKKLAESNAMDFDDLLFNTVRMLQMVPNLAEQLRERFQYVVV 248 Query: 220 DEFQDTNNIQYAWIRLL-AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIR 278 DE+QDTN++QY ++LL DT V +VGDDDQSIYGWRGA ++ I+ F DF ++ Sbjct: 249 DEYQDTNDVQYELLKLLINRDTKNVTVVGDDDQSIYGWRGANIKIIRNFHRDFAPVTIVK 308 Query: 279 LEQNYRSTSNILSAANALIENN--NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNR 336 LE+NYRST+NI+ A ++I +N + K +++ GE I + ++ EA + Sbjct: 309 LERNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELIHVRYFEDDRAEASNIAKT 368 Query: 337 IKTWQDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYL 395 + G A+ AI YR+NAQSRVLE+AL +P I+GG RF++R+EIKD L+YL Sbjct: 369 VA---QAGPDFYAKTAIFYRTNAQSRVLEKALNDLRIPSVIFGGTRFWDRKEIKDVLAYL 425 Query: 396 RLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA 455 R++AN DDAA+ RV+NTP R IG T++ V + + + W LL E GR A Sbjct: 426 RVLANEKDDAAYLRVINTPPRAIGKTTVEGVLAKVKAGEGSFWD---NLLAEANGTGRGA 482 Query: 456 SALQRFMELIDALAQE--TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV 513 L+ F +L+ + + PL + + +I D+G + +E RI NL+E++ Sbjct: 483 PKLKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKEDEVTADERIANLDEMI 542 Query: 514 TATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFI 572 A R+F +E+ L AFL +L + DT + V LMT+H AKGLEF V + Sbjct: 543 NAIREF---DEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFNTVHL 599 Query: 573 VGMEEGMFPSQM-----SLDE-GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY 626 G ++ +FP S+ E ++EEERRL YVG TRA +KL L +AE R G Sbjct: 600 AGCDDEIFPLVRGTSMLSMAEINEQMEEERRLFYVGCTRAEKKLYLYHAERRFFQGNIRP 659 Query: 627 HRPSRFIGELPEECVE---EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGE 683 PSRF+ EL V+ + R +V V + R P + G R + G Sbjct: 660 FAPSRFLKELDPSVVDFTPCLNTRPSVPDFVGNTR-SKPSYGSYGSSNYGSRPSYGNSGS 718 Query: 684 G 684 G Sbjct: 719 G 719 Score = 66.0 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 648 ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 + V P +E D+ Y G RVRH+++G G I+ GSG+++R+ V F + + Sbjct: 769 RNPVKVVKAPAPSGPTIEYDNPYHEGARVRHSRYGTGVIMKAYGSGDNARVDVRFDRENM 828 Query: 708 -KWLVAAYARLESV 720 + ++ YA LE + Sbjct: 829 NRTIILKYAALEVI 842 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 234/654 (35%), Positives = 343/654 (52%), Gaps = 21/654 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q AV S LLVLAGAGSGKTRV+ +I +L+ + + AVTFTNKAA Sbjct: 8 GLNAQQSAAVRHLESPLLVLAGAGSGKTRVITEKIVYLIEKQGIPARQVFAVTFTNKAAK 67 Query: 69 EMRHR-IGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM R +L + G+ + TFH L +R + L F + DS+D L L K LI Sbjct: 68 EMVARTAERLPPERRRGLNISTFHTLGLNFIRREYAALGLRAGFTVFDSDDSLALFKSLI 127 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-----NPVEQTWQKVYQAYQEACD 182 + P+ A W I+ K++ P + + ++ YQ Sbjct: 128 GHSEYKDV-IEPKAAQWQISQWKNDLRTPQSCYEQAKNEGWDEETRALAGLFDQYQRQLT 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +L+ R EL + + + ++ R +LVDE+QDTN QY +RLL G G Sbjct: 187 ACNALDFDDLIGRPVELLQSDAAVRERWQARVRYLLVDEYQDTNTTQYELVRLLVGKIGA 246 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDD QSIY WRGA+ EN+ R +DFP I+LEQNYRS +++L AAN LI + Sbjct: 247 LTAVGDDHQSIYAWRGAKPENLNRLADDFPNLHRIKLEQNYRSVNSVLKAANHLIALDTT 306 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 K+LW+D GEP + A DEA + I + A+L+R N Q+R Sbjct: 307 TASKQLWSDIGMGEPHRVIVAATAEDEAERIATEILHRHFRAQTEYRDFAVLFRGNHQAR 366 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 ++E+AL + ++PY + GG FFER EIKDA+SYL+L+ N +DDAAF RVVNTP R IG Sbjct: 367 LIEQALRKLNIPYSLTGGQSFFERAEIKDAMSYLKLLVNPDDDAAFLRVVNTPRREIGPT 426 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + +R+R+ +L+ A R + + RAA L RF + +D + + + V Sbjct: 427 TIEKLGGFARERRSSLFAAARSIGIQSVFDNRAADRLNRFCDWLDGIRAQPDRDAIDV-I 485 Query: 482 DRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNE--------EDEDLMPL 531 +V +++ + R +N+EE + + S + E M L Sbjct: 486 QQVFDAIDYPAYLREQESTPKAADRRWQNVEEWLDWLAKISDTQVEAESEGGESATKMDL 545 Query: 532 QAFLSHAALE--AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 A L + + +AV L+TLH+AKGLEF VF+ GMEE + P + +++ Sbjct: 546 PALAQRMTLLGILDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCIEDE 605 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 RL EERRL +VG+TRA LT T + RR YG+ PSRF+ ++P + ++ Sbjct: 606 ARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDIPADLLQW 659 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 228/649 (35%), Positives = 357/649 (55%), Gaps = 19/649 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L SLN QREAV LLVLAGAGSGKTRV+ HRIA LM P I+A++FTNKA Sbjct: 3 LSSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLME-LGTQPEEIVALSFTNKA 61 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++G ++ + +GTFH L R++R +P FQILD D +++ Sbjct: 62 AEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDVNGIVRA 121 Query: 126 LIKAMNLD----EKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQE 179 L++ +K+W + I+ K++ L ++ N ++ ++Y+AY + Sbjct: 122 LLREYGFHGGSAKKRWDINAIVQRISLWKNDFLSAAEVKRKVSSNDYDEIAAELYEAYDD 181 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +L+ R + + P + +R RF +LVDE+QDTN Q+ + L G+ Sbjct: 182 RLRALAAVDFDDLVCRIALMLQDNPLTKKRWRRRFRYLLVDEYQDTNTAQFQMLLELLGE 241 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQ+IYGWRGA+V NI F F A+ I+LE NYRS I + ANA+I + Sbjct: 242 DQNLCVVGDDDQAIYGWRGAKVANILGFDLYFRNAKVIKLEANYRSRPPITTCANAVIAH 301 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNA 358 N R K+L GE + L + EA++V ++I + G CA+LYRS+ Sbjct: 302 NTSRHDKELVPQRTGGEKVQLVVTRDGPSEAKWVADKIYQLIHERGARPKHCAVLYRSSR 361 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q+R +E+ L + +P+R+ GG F++++ +KDA +YL+L+ +DD A R ++TP +GI Sbjct: 362 QARAVEQNLQEHGLPFRMLGGQPFYDKKTVKDATAYLKLLVMPSDDIAVRRALDTPAKGI 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G +T++ + + Q L A + + + GR +L+RF + + + Sbjct: 422 GRKTVERMSHWAEVHQKRLVDAIYHAKEIEGITGRPLESLERFHNQLRHAQIAASRGSVK 481 Query: 479 VQTDRVIKDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYNEEDEDLMP-LQAFL 535 + + LR +E GE + R ++++ L+ + +F ++ P +L Sbjct: 482 DALRGFLDNVRLRDSVLKETGSGEATKVRWDSVQFLLDSVGRFEERAWNQKGKPRWSDYL 541 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE------G 589 + L+ + + + DA+ L T HS+KGLE+ QVFI+G+EEG P + + Sbjct: 542 GNLDLK-KKDEDEAVPDAITLSTFHSSKGLEWSQVFIIGVEEGTLPHKRTDAPRLSDAIA 600 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 G LEEERRL YVG+TRA +L +T A TR G+E+ +PSRF+ ELPE Sbjct: 601 GDLEEERRLFYVGITRARDRLWMTRAATRVDRGRELEIKPSRFLDELPE 649 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 253/748 (33%), Positives = 390/748 (52%), Gaps = 39/748 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L+ LN Q+EAV+ LLVLA AGSGKTRV++ R+ +L+ S ++ VTFT K Sbjct: 2 ILEELNPAQQEAVSHEGGPLLVLAPAGSGKTRVVIARLLYLLDRYGWSEDRLLVVTFTRK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA E+ HRI +L +S+ WVGTFH +A R+LR +LP++F I+D DQL++++ Sbjct: 62 AARELLHRISRLRPSSRPS-WVGTFHSVAARMLRQQAERLDLPREFTIVDGPDQLQMIRD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 L+ + +K+ P++ I K G+ P + ++Y AYQ+ Sbjct: 121 LLGRQGVSDKEVDPKKLAGRIGKWKSAGVDPVEAIRTTFGPFRVQAELYAAYQDNLALQK 180 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DF +LLL P + + Y+ +F +ILVDE+QDTN +Q +RLL+ D V + Sbjct: 181 ALDFDDLLLTLVRCLEQDPEVRETYQRQFEHILVDEYQDTNPLQERLLRLLSRDRQNVTV 240 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY +RGA+V +I F ++PGA + L NYRST I++AA+++I + R Sbjct: 241 VGDDDQSIYRFRGAEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSALARYR 300 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K + + G GEP+ L +E EARFV I+ + G + +L+R N Q++ Sbjct: 301 KDMVSTGRPGEPVFLKKLDSEWAEARFVARTIQEKVERGAMFRDQVVLFRMNVQAQPFIR 360 Query: 366 ALLQASMPYRIYGGM-RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 A +A +P++ G + FF R+EI+D L+YLR+ AN D + R++N P RG+G++ + Sbjct: 361 AFAEAGIPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPPRGMGEKARE 420 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM-ELIDALAQETADMPLHVQTDR 483 + Q + + L+ W+ L+G+A + + F +L +A + Sbjct: 421 RLDQQAGNPGLSSWE--LLERLSLELSGKARESARAFANDLEEASRRVRRGDGPFSLLQF 478 Query: 484 VIKDSGLRTMY-EQEKGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQAFLSHAALE 541 + +G E E GE+G R ENL+EL+ + +F E D P FL AL Sbjct: 479 WLSRTGYEQWVSEGESGEEGPGREENLKELLRMSERFGDGIGELTDRTPTGVFLEELALS 538 Query: 542 AGE-GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + G+A D V L+T+H AKGLEFP V++ G EE + P M + +EEERRL Y Sbjct: 539 QEDPGEAGESPDRVSLLTIHQAKGLEFPHVYLAGAEEDILP--MKSRDKVDVEEERRLFY 596 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V +TRA L +T+ TR+L+G+ RPSRF+ ++P E V+ R PVS Q Sbjct: 597 VAMTRARDSLAITWCLTRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPVSRQTSE 656 Query: 661 -----------------------------TPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 +P E +G+ V H +FG G + G Sbjct: 657 LPPRKVFPPPSLAPSRPATSLRSVPEKRTSPPTEVLRPEWIGKTVVHPRFGRGRVEEAHG 716 Query: 692 SGEHSRLQVAFQGQGIKWLVAAYARLES 719 G L + F+ G++ L+ +A L+ Sbjct: 717 EGGDLELSIRFESSGVRRLLERFANLQV 744 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 223/724 (30%), Positives = 376/724 (51%), Gaps = 47/724 (6%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + LND Q+EA+ +L+LAGAGSGKT+ + R+A+L+ + + +TFTN Sbjct: 2 SFFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLTLTFTN 61 Query: 65 KAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA M+ R L+ + + TFH LR + N +F I+D++D+ ++L Sbjct: 62 KAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKIL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-------QSYGNPVEQTWQKVYQA 176 K L Q YI++ K++ I + N + +Y+ Sbjct: 122 KDLASE----NLQSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQ 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y+ + +DF +LL+ +++ + +++T I VDE+QDTN +QY ++ L Sbjct: 178 YEHFLIQNNFMDFDDLLMLTNKIL-EDEAFAKEQSQKYTYITVDEYQDTNALQYQILKKL 236 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + +VGDDDQSIYGWRGA++ENI F F + ++LEQNYRSTS IL AAN L Sbjct: 237 CASHENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANEL 296 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 IE+N RLGK L +GE I++ +E E+ V + ++G +E AILYR Sbjct: 297 IEHNRKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRV 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NA SR LEEA + +P+++ G+RF+ER EIKD +SYLRL++N NDD +F+R++N P R Sbjct: 357 NALSRALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKR 416 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G+ +L+ + +++ L+L+++ L + + L++F+ + + ++ + Sbjct: 417 NFGNASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLA 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + + + ++ ++ Y+ +G+ ++ N++EL + + L L+ Sbjct: 477 MILALE---EEFKIKEFYK--DNPEGEDKLLNIDELYANLKD---KISHGNYNGLDDILN 528 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L + D ++++ +M++H++KGLEF VFI+G+EEG FP E +EEER Sbjct: 529 EISLLNEQDGLD--KESICIMSIHASKGLEFDYVFIIGLEEGFFPLT---SESSNIEEER 583 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RLAYV +TRA +KL L+YA +R G SRF GE + Sbjct: 584 RLAYVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGE------------------SNV 625 Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 + + + YK G ++H FG G + + G +L + F G + +++++ Sbjct: 626 IKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSKIGAEEKLTINFGGI-ERMIMSSF-- 682 Query: 717 LESV 720 +E V Sbjct: 683 VEKV 686 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 232/650 (35%), Positives = 376/650 (57%), Gaps = 23/650 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD +L+++++ QRE + S LL+LAGAGSGKT V+ +IA+L++ +P +IMAV Sbjct: 1 MD---ILENVSEVQREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAV 57 Query: 61 TFTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EM+ R+ L+ +++ TFH R+L+ + +F ILD D+ Sbjct: 58 TFTNKAAHEMKERVCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDK 117 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 ++KR++K + K + +I++ K+ G+ + ++ VY+ Y E Sbjct: 118 ASVIKRIMKEEEV-PKSIGQKIITRFISNVKN-GMDDGIVFDR-----DIFENVYKKYTE 170 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 ++DF +L+L +L+ + +L +YR RF ILVDEFQDTN QY I+LL D Sbjct: 171 YEFNENVMDFDDLILNTIKLFEQENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQD 230 Query: 240 TGK-VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY +RGA V NI F D+P + +RLE+NYR +I+ AA ++I+ Sbjct: 231 AENDLTVVGDDDQSIYAFRGADVLNILDFEKDYPNTKIVRLEENYRCPKDIVEAALSVIK 290 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN+ R K ++++ + I + +++L+EAR VVN I++ DNG + +L+R+N+ Sbjct: 291 NNSNRHEKNVFSNKPNEFKIENWICYSDLEEARSVVNEIESLFDNGFEARDIVVLFRTNS 350 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR E+ L S+ Y+I GG+ FFER EIKD++S+LRL+ D+ + R +N P RGI Sbjct: 351 QSRAYEKELRLHSINYKIVGGVGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPPRGI 410 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD---- 474 G+++ + + R+LTL+ A + + E L+ +A ++ + +I+ A + + Sbjct: 411 GEKSFNNFETFANSRKLTLYNAI-DYIDESGLSKKAILNIKAYKNIIEEYAVKIKEDIIN 469 Query: 475 ---MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + + + +KD ++++ + E+ T EN++EL + E + L Sbjct: 470 EDGIHIELLFFEFLKDIDYFSIFKGDGNERVITAEENIKELFRGFYDYKSMEAN---ATL 526 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 FL L D +D V LMT+H+AKGLEF VF+ GME+G+FP SL+E Sbjct: 527 ITFLEENTLYRDLNTNDEKEDYVTLMTIHNAKGLEFDVVFMTGMEQGVFPHYFSLEEEKG 586 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 ++EERRL YVG+TRA +KL LTY++ RR+ + PS F+ E+P++ + Sbjct: 587 IDEERRLCYVGITRARRKLYLTYSKKRRVSTGIMEQIPSSFLLEIPKKLM 636 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 222/755 (29%), Positives = 390/755 (51%), Gaps = 64/755 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ P I+A+TF+NKA Sbjct: 4 LKDLNEQQKSAVIYNEGPLRIIAGAGSGKTRVLTYKIAYLIQKLGVLPNRILALTFSNKA 63 Query: 67 AAEMRHRIGQLMGTSQGG---MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 A EM+ R+ L+ ++ TFH + ++LR + DFQILD DQ +L Sbjct: 64 ANEMKQRVFNLLAEDNPSNLSPYISTFHAMCAKILRKEIYNFGYENDFQILDELDQKEIL 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDE---------------GLRPHHIQSYGNPVEQ 168 K + +++ ++ + +I ++K+ ++ ++ Sbjct: 124 KIVYSELDISPTEFTFSSIISFIQNKKNSIEYLNNSINDNNEHFNEDSDSQETQDEKIKA 183 Query: 169 TWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN--KPHILQHYRERFTNILVDEFQDTN 226 +K+Y+ YQ +R+ +DF +LL+ ++L+ + + +++RF IL+DEFQDT+ Sbjct: 184 IKEKIYERYQLHLERSHSLDFDDLLVFVYKLFYEPKFSFVAERWKKRFDYILIDEFQDTS 243 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST 286 +QY ++ LA + + IVGD DQ+IY WR A + I F D+P + T++LE+NYRST Sbjct: 244 ILQYRIMQKLANEH--LTIVGDPDQTIYSWRNADINIIMNFDKDYPNSVTVKLEENYRST 301 Query: 287 SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA 346 IL AAN LI +N RL KKL+T+ +GE I YC FN+ EAR++ +I + N Sbjct: 302 KTILRAANNLISHNKLRLEKKLFTENEEGENIEFYCGFNDEAEARWIATKISELKRNRVQ 361 Query: 347 LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAA 406 L AILYR+N+ SR +EEAL++ + Y+++G ++F++R+E+KDAL+YLR+I + + + Sbjct: 362 LKNIAILYRTNSCSRAIEEALIKENTIYKLFGSIKFYQREEVKDALAYLRVIHD-GSEIS 420 Query: 407 FERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR----ELLQEKALAGRAASALQRFM 462 R++N P+R IG+ T++ + S+ L L++ ++ +E ++G L F+ Sbjct: 421 LLRIINKPSRKIGNVTIEKLLSASKKYNLGLFEYLETHFNQIQKELHISGDTLKNLANFI 480 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 I + +H+ +I + + E+ + +I+N L+ A ++ Sbjct: 481 NEIRWARRAIQTNAIHLTIKELIVNKIKYFDEIKNSEEEYENKIDNFNSLIEAIAEWEKK 540 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS 582 + +L L D V LMT+H++KGLEF VF+ + E +FP Sbjct: 541 NPQG---SIDEYLQEITLITDRDVEDDAASFVSLMTVHNSKGLEFDYVFVACLAENIFPL 597 Query: 583 QMSL-----------------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 + ++ + LEEERRLAYV +TRA ++L L+++ G+ Sbjct: 598 KRAISISPQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLMLSFSV-----GRNG 652 Query: 626 YHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 +R SRF+ E + +++ S + ++ +G + H +G+G Sbjct: 653 INRKSRFLSEAGINEIRTIKIANNFSIAAEQETRNNDLI-------VGDYIIHNTYGKGL 705 Query: 686 IVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLES 719 I++M + ++V F+ + I+ L + ++ Sbjct: 706 IIDM----VDNVIEVKFENDKKIRKLSKTHHSIKK 736 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 237/780 (30%), Positives = 374/780 (47%), Gaps = 94/780 (12%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 L+ +Q EAV + V+AGAGSGKTR L HR +L+ SP +I+ VTFTNKAA Sbjct: 19 SRLDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKEMGISPANILCVTFTNKAA 78 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 AEM+ RI ++G G ++ TFHG + LR N P++F ILD +DQ LL++ Sbjct: 79 AEMKKRIRSILGGDDSG-YISTFHGFCVQFLREEIHVLNYPKEFMILDEDDQKSLLRKAY 137 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGL----------------------------RPHHI 159 + K + ++ +K + + H+ Sbjct: 138 ADLGFSLKDLKISSVLDFVGGRKANDIGYVSLFAEHLADEVGASAAENAPAVENEKREHL 197 Query: 160 QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 + W VY Y + +DF +L+L + N P L +R+R ++V Sbjct: 198 VELADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILENFPEKLDKWRKRMMYVMV 257 Query: 220 DEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 DE+QD + QY LL+ + +VGD DQ+IYGWRGA + I F G +TI L Sbjct: 258 DEYQDIDGQQYCLADLLSSYHKNLFVVGDPDQTIYGWRGADINRILEFDQFHKGTKTILL 317 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 + NYRST +IL +A+I+NN R+ K L A G+ Y A N +EA+++V RI+ Sbjct: 318 QNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTREEAKWIVERIQN 377 Query: 340 WQDN-------GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL 392 N G + A+LYR ++QSR +EEAL+ S+PY++Y G+ F++R+EIKD + Sbjct: 378 AVQNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYKVYSGVGFYQRKEIKDII 437 Query: 393 SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAG 452 YLR++ DD +F R VNTP R G + + +++ + R++ L++A E++ E Sbjct: 438 CYLRMLV-YADDLSFIRTVNTPKRQFGPKKMAILQAFADTRKVGLYEALLEIVYEAGRLN 496 Query: 453 R-----------------------------AASALQRFMELIDALAQETADMPLHVQTDR 483 + S + +++LI+ DM + + Sbjct: 497 DVAPDVTTQAELSSVGNDHRKIDFDCKEFLSRSNVVEYVKLIEKYRSRYKDMRVSELLSK 556 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +++++ M + E R++NL EL +F E++ L +L + L Sbjct: 557 MLRETKYEEMLRLDGDED---RLDNLAELKQGILEFENYYEED--ASLDEYLQNIVLFTN 611 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + +D VQLMT+H+AKGLEFP VF+ G+ EG FP + + +LEEERRLAYV Sbjct: 612 ADEDSQEKDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVKR-VQNKMQLEEERRLAYVAF 670 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR---------LRATVSRPV 654 TRA L L+ AE + G+ PSRF+ E+ + ++ R RA ++ Sbjct: 671 TRAENVLCLSDAED-GVAGESGSRYPSRFLLEMNMDELDVARGFSDDLLLAARAFIAESD 729 Query: 655 SHQRMGTPMVENDS----------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 ++ + E++S + +G RV H FG GT+ ++ + F Sbjct: 730 RNRDLMNDFDEDESLGAVKKAPTAEFAVGDRVVHKIFGIGTVSGVDKKNFCYEIT--FDK 787 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 669 bits (1726), Expect = 0.0, Method: Composition-based stats. Identities = 227/719 (31%), Positives = 380/719 (52%), Gaps = 26/719 (3%) Query: 16 EAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIG 75 AV + ++AGAGSGKTRV+ +IA+L+ +N P I+AVTFTNKAA EM+ R+ Sbjct: 16 AAVLNIDKPVRIIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVL 75 Query: 76 QLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLD-- 133 Q+ S ++ TFH ++LR L F I+DS+DQ R++K +K N++ Sbjct: 76 QITNNSFKSPFISTFHSWCSKVLRIDGKHIGLEDKFLIIDSDDQKRIIKSALKESNIELS 135 Query: 134 --EKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRAGLVDFA 190 +K+ ++ ++ I K+E + P I + + +E+ + +Y+ YQ + +DF Sbjct: 136 ENDKKTFDKKILYKIKEWKEELVDPSEAILNATSTLEKNFAVIYRLYQNTLLKNNSLDFD 195 Query: 191 ELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDD 250 +L + + L+ IL +R + +LVDEFQDTN +Q++ I+ L +T + +VGD D Sbjct: 196 DLQIYVYRLFKQNNEILNKWRNAYDYVLVDEFQDTNELQFSLIKFLTINTNHLTVVGDPD 255 Query: 251 QSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWT 310 Q+IY WRGA+++ I F + A +I L QNYRST IL +N+ I+NN R K+++T Sbjct: 256 QTIYSWRGAKLDIILNFNKTYSNAISIVLNQNYRSTKQILDISNSFIKNNKFREHKEIFT 315 Query: 311 DGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQA 370 + G+ + L ++ EA +V ++IK G + ILYR NA S+ E+ L Sbjct: 316 NNKSGKKVVLKECNSKTSEASYVSSKIKELVKQGYHYKDIFILYRMNAWSQEFEKELANK 375 Query: 371 SMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTS 430 +P+++ GG++F ER+ IKDA+++L++I+ D+ + +RV+ + IG+ T++ + T+ Sbjct: 376 KIPFQLIGGIKFRERKVIKDAMAFLKMIS-IKDNLSSQRVLGLIPK-IGNITIEKIINTA 433 Query: 431 RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP-LHVQTDRVIKDSG 489 L ++ ++K L L +E+ Q D + ++ SG Sbjct: 434 NLNHLNIFDLITN--EDKTLLHSITKNLDELIEVFKTAHQLYLDNTNIEEILKYLLIQSG 491 Query: 490 LRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP---LQAFLSHAALEAGEGQ 546 K K Q +EN+ L ++F + + + L AFL AL + + Sbjct: 492 YENKL---KIRKEQDDLENINALYDQLKRFDEDFDPKYYSEENKLIAFLQEEALTSDIDE 548 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRA 606 A+ D V L+T+H+AKGLE VFI G+ +G+FPS++S LEEERR YV +TRA Sbjct: 549 AEQI-DKVSLLTVHAAKGLENKVVFITGLNQGIFPSRISETSINELEEERRALYVALTRA 607 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-EVRLRATVSRPVSHQRMGTPMV- 664 +L LTY + + + +PS+FI EL ++ E E + T+ + + + V Sbjct: 608 KDELFLTYVKGDYSHIMQSELKPSKFIHELDKDLYEFETQFLNTLLYDSNDYKQSSFYVS 667 Query: 665 -ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ--GIKWLVAAYARLESV 720 + + Y +G V H FG+G +V + + +LQ++F GI + + L V Sbjct: 668 PKQHNLYNVGDHVEHKLFGKGVVVKI----INDQLQISFTNSSYGIMMIATNNSALSKV 722 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 668 bits (1723), Expect = 0.0, Method: Composition-based stats. Identities = 235/720 (32%), Positives = 367/720 (50%), Gaps = 34/720 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LLD LN+KQREAV S+L ++AGAG+GKT+VL +I +L+ + P I+AVTFT Sbjct: 7 KDLLDDLNEKQREAVEYFDSHLRIIAGAGTGKTKVLTRKILYLILEKKVDPSKILAVTFT 66 Query: 64 NKAAAEMRHRIGQLMGTSQGGMW--VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 NKAA EM+ RI Q ++ V T H ++LR + ++F ILD D+ + Sbjct: 67 NKAAKEMKDRINSKYYDKQKVLFENVFTLHSFCAQVLRKYINLIGFSRNFPILDELDKKQ 126 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI------QSYGNPVEQTWQKVYQ 175 +L+ L + + YI+ K+ L + Q G+ V +T VYQ Sbjct: 127 VLQDLYVKNKITNHEVSYSNMAKYISWAKNNLLDQKDLIAELEKQFSGDAVSKTIANVYQ 186 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y G +DF +L+L L P++ F ILVDEFQDT+++Q+ + Sbjct: 187 DYLNYMAEKGALDFDDLILHCKTLLEMHPNVAAKIARYFNYILVDEFQDTSDLQFDILEK 246 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + + ++ IVGD DQ+IY WRGA V+ I F N F ++TI L+ NYRST IL++AN Sbjct: 247 IIDKSSQLTIVGDPDQTIYNWRGASVDLILNFENIFENSKTIVLDTNYRSTKKILASANK 306 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI+NN R K L T+ +G I Y AFN EA++V+++IK + + ILYR Sbjct: 307 LIKNNKNRFSKDLITNNDEGNDIEFYHAFNTEAEAQWVISKIKLLKKQKHQIKNIVILYR 366 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 SN SR E+ALL + Y+I+ G +F++R EIKD L++L+ I N D A +R++N P Sbjct: 367 SNYYSRAFEDALLGEGINYKIFNGYKFYQRTEIKDVLAFLKTILN-KDSIALKRIINVPV 425 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA-SALQRFMELIDALAQETAD 474 RGIG +T++ + + +++L+ A +E L + F++++ + Sbjct: 426 RGIGPKTVEKIEAFAEKNKISLYDALFTHFKELPLGKEIILKKIYPFIKILRKYQLISEK 485 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 PL V T +++++ + + E Q IEN++EL++ + E + Sbjct: 486 YPLPVITQKLLEELNYLEQIKGNQNE-NQNAIENVKELISVS--MKNYFETNKEATAIDY 542 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--- 591 L+ +L + G+ D V LMT+H++KGLEF VFIVG+ EG+FP+ L++ Sbjct: 543 LNQVSLLSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLTEGVFPNYKHLEDAKENKH 602 Query: 592 ---------LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 +EEERRLAYV +TRA + L ++ + + SRFI E+ + Sbjct: 603 KTKTELNKGIEEERRLAYVAITRARKNLFVSDSRGSVYAPIIHEKQTSRFIREMGIDF-- 660 Query: 643 EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 V + R + + +G V H +FGEG + + + V F Sbjct: 661 ---ESFLVDKTSKFSRYLSEEENKNIKIIVGDAVSHTRFGEGIVQEV----NDYDIVVKF 713 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 234/645 (36%), Positives = 359/645 (55%), Gaps = 10/645 (1%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN Q+ AV L+LAGAGSGKT+V++++I +L++ P +I AVTFTNKAA Sbjct: 2 SLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAY 61 Query: 69 EMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ + + + + TFH L +++ L +F +LD +DQ+ LLK++ Sbjct: 62 EMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALELNNNFTLLDEKDQILLLKKIC 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRAGL 186 K + ++ + I+ K++ L P +Q + E+ + VY+ Y +A + Sbjct: 122 KK-EIKNNIQLLKKLNFMISYWKNKFLTPLQVQLLAKSSQEKDFAYVYEQYTNYLYKANI 180 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L+ L N I ++++ + +LVDE+QDTNN QY I++LA +V Sbjct: 181 LDFDDLICMPTLLLKNNKKIKIRWQKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTLV 240 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA +NI DFP + I++E NYRS+ IL AAN+LI NN L K Sbjct: 241 GDDDQSIYSWRGANPQNIFLLKKDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEK 300 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSRVLEE 365 KL++ G I + NE +EA+ +V + I + + AILYR N QSR+LE+ Sbjct: 301 KLFSQLKYGNLIKVLIGKNEENEAQKIVKKIISQYAKKKIKYRDFAILYRGNYQSRILEK 360 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 AL++ ++PY I FF R EIKD LSYLR++ NR+D+ AF R+VN P+R IG TL Sbjct: 361 ALIKENIPYNISEKSSFFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIPSRQIGKTTLKK 420 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + + ++L+QA + +K L ++ F+ I+ + P ++ D ++ Sbjct: 421 LEEWANKKHVSLFQASNNIEIKKFLNENTIKKIKNFISKIEKFTAWSCLKPSNI-IDDIV 479 Query: 486 KDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE-- 541 D + + K + I N+ L + ++ E M L ++ + Sbjct: 480 DDLEYEKWLSKFLKDPNKIKNSINNVHTLSQWFKNMIKGDDFEKPMTLFQIVTRMTIRDI 539 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + QD VQLMTLH++KGLEFP VFI+GM EG+ P+Q S+D +EEERRL YV Sbjct: 540 LDDNIIKEQQDRVQLMTLHASKGLEFPAVFIIGMCEGILPNQKSIDN-DNIEEERRLTYV 598 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 G+TRA ++L TY R YG+ + PSRF+ ELP+E ++ + Sbjct: 599 GITRAKKQLFFTYCYKRTQYGQILDMLPSRFLFELPQEDLKWEKK 643 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 227/659 (34%), Positives = 337/659 (51%), Gaps = 36/659 (5%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN Q+EAV LVLAGAGSGKTRV+ H+I L+ I A+TFTNKAAA Sbjct: 24 GLNLAQQEAVNYLHGPCLVLAGAGSGKTRVITHKIGRLI-QSGLKAEQIAAITFTNKAAA 82 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EMR R L+G G+ + TFH L R+LR L Q F ILDS+D +LK Sbjct: 83 EMRERAKSLIGKQAKGVLICTFHALGVRMLRQDGQALGLKQQFSILDSDDVTSILKDA-- 140 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACDRAGLV 187 RQ W I++ K +GL + N E+ +V Y+E V Sbjct: 141 --GGSTDVATARQWQWTISAWKGQGLNAAQAAAQASNDEERLVARVMAHYEERLTAYQSV 198 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ +L + +++ ++LVDE+QDTN QY ++LL G G+ VG Sbjct: 199 DFDDLIGLPLKLLREHEAVRNKWQQSLGHVLVDEYQDTNATQYEVLKLLVGTRGRFTAVG 258 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA ++N+++ D+P + ++LEQNYRSTS IL AAN +I N K Sbjct: 259 DDDQSIYGWRGATLDNLKKLPEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPKLFPKT 318 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG---------GALAECAILYRSNA 358 L+++ +GEP+ + +E EA VV RI++ + G + +LYR+N Sbjct: 319 LFSELGEGEPVRVVDCDSEEHEAERVVARIQSLRAGGELQAVGSQYKEWKDFCVLYRANH 378 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q++ LE+A +A +PY++ GG FF+R EIKD S++ L+ N +++ AF R V TP RGI Sbjct: 379 QAKPLEKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTTPKRGI 438 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET-----A 473 G TL + + +L+L++A L +A +LQ F ++ L A Sbjct: 439 GHTTLGTLGTFADQYKLSLFEALFSNSLSSVLPAKAVGSLQEFGRYLNELEYRARRTVGA 498 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEK-GQTRIENLEELVTA--------TRQFSYNEE 524 + D + + + +Y+ E EK R N+ + S Sbjct: 499 EDARTFLNDWLKEIDYEKHLYDGEDSEKVAAARWSNVMDFCDWMALRCGGQIDDTSGAVV 558 Query: 525 DEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM 584 + + + + AL + + + Q+ V L TLH++KGLE+P V + G EG+ P ++ Sbjct: 559 ESEKKTMLEVVQTIALLSTISEREGDQNVVTLSTLHASKGLEWPHVMLAGCNEGLLPFKL 618 Query: 585 SLDEGG-------RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 D+G RL+EERRL YVG+TRA + L + + R+ + PSRFI E+ Sbjct: 619 EEDDGSNTDNIALRLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEM 677 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 233/682 (34%), Positives = 345/682 (50%), Gaps = 52/682 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + L +LN+ QR+AV S LL+LAGAGSGKTRV+ +IA L+ P I+AVTF Sbjct: 1 MESYLSALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R L ++ G + TFH L +LR + + L F I D D L Sbjct: 61 TNKAAREMRTRACAL-ESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRAL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV------------EQTW 170 L +++ + R I+ KD GL +S V ++ + Sbjct: 120 LPKILPHCDHSRAGMLARG----ISQAKDYGLDCASFESVHARVSAPACAARAVLGDRQF 175 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 Y Y G VDF +L++ +L + + R+ ++VDE+QD+N Q+ Sbjct: 176 AHAYACYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQLHARWQVVMVDEYQDSNVAQF 235 Query: 231 AWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNIL 290 ++++L G + +VGDDDQSIY +RGA+V+NI F F + IRLE NYRST IL Sbjct: 236 HFLQVLTGAHTYLCVVGDDDQSIYRFRGAEVKNILTFPEFFQNTQIIRLEYNYRSTDAIL 295 Query: 291 SAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAEC 350 A+++++ N RLGK L G L+ N+ +EA V+ I+ + G A+ Sbjct: 296 RVADSVVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDEEAALCVHLIQEARARGIPYADW 355 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR NAQS E+ L+ +PYRI G ++F+ R E+KD L++L+LI N +D+ A RV Sbjct: 356 AILYRVNAQSLSFEQCFLRNRIPYRIVGTLKFYSRAEVKDVLAFLQLIVNGSDELALRRV 415 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 +N P RGIG++T D + ++ +T + + AL RA + F+ L+ AL Sbjct: 416 LNKPPRGIGEKTQDALFVCAQQAAITDFTTL-QSTHLTALGTRARQKVSSFLSLLRALRA 474 Query: 471 ETADMPLHVQTDR-------------------------VIKDSGLRTMYEQEKGEKGQTR 505 P + R V++ +GL Y Q+ E+G Sbjct: 475 RMPQAPAAGEEARTSAPPEEPVEERTHDAEGLARFVSVVMEHTGLEEWYRQKDEEEGTQC 534 Query: 506 IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGL 565 N++EL+ A ++ + E L +FL H L+ DAV L+T+H+ KGL Sbjct: 535 AVNVQELMNAASLYACSHEG-----LVSFLEHIQLDQNMADEGGAADAVHLITIHNTKGL 589 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 EF +V + G+E G+FP D+ ++EERRL YV TRAM L LT RR++G+ Sbjct: 590 EFRRVILTGLENGVFP----RDDEADIQEERRLMYVACTRAMDSLYLTACAYRRMWGRHT 645 Query: 626 YHRPSRFIGELPEECVEEVRLR 647 +PSRF+ EL +E R Sbjct: 646 AMKPSRFLTELDSALLEITDPR 667 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 664 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 226/661 (34%), Positives = 347/661 (52%), Gaps = 38/661 (5%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LN++Q AV++ LV+AGAGSGKTR L +R+AWL+ P++I+ +TFTNKAA Sbjct: 25 ALNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLD-HGTDPWNILLLTFTNKAAR 83 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ L+ +W GTFH +A+R+LR H F I+DS+D+ ++K ++K Sbjct: 84 EMTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSDDRKSMIKSVVK 143 Query: 129 AMNLDEK--QWPPRQAMWYI-NSQKDEG----LRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 ++ LDEK ++P + + + + +EG + Y + +V+ Y Sbjct: 144 SLKLDEKSTRFPKPEVLSSLFSLADNEGANIRETQENAYPYLSNHLDAILEVHDQYVARK 203 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +LLL L+ + H+ Y RF +ILVDE+QDTN +Q I +LA + G Sbjct: 204 QETNSMDFDDLLLNVVRLFQEQEHLRALYGSRFQHILVDEYQDTNYLQSRLIDMLAREHG 263 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 ++M+VGDD QSIY WRGA +ENI F +P A+T ++E NYRS IL +NA I N Sbjct: 264 QLMVVGDDAQSIYSWRGADMENILSFTTRYPAAKTFKIETNYRSVPEILELSNAAIAANE 323 Query: 302 GRLGKKLWTDGADGE-PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 ++ K+L + GE P +L ++ +A+FVV RI+ + G +E A+LYR++ S Sbjct: 324 VQIEKQLRSVRPTGEMPPALVPLNDDRMQAKFVVQRIRDLIEEGTDPSEIAVLYRAHFHS 383 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 L+ L + +P+RI G+RFFE+ IKD ++++R + N D+ +F R+V GIG Sbjct: 384 MELQMELTRGEIPFRITSGIRFFEQAHIKDVVAFMRFVVNPRDELSFRRMVMLLP-GIGP 442 Query: 421 RTLDVV----RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA---QETA 473 + RQ T ++ L+ + + ++ +A + +D LA + Sbjct: 443 GMAQKLWIRWTACPESRQETPPESFSALMLDFPVPAKSRTAWTQLCYTLDELAPAGKLAG 502 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + + + + D Y Q E R ++L L + +F E Sbjct: 503 PASMLLSINEAVYD-----EYMQAAFENYDQRRQDLLHLAGFSERFESTE---------D 548 Query: 534 FLSHAALEAGEGQADTWQD----AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 FLS +L D +V L T+H AKGLE+ VF++G+ +GMFP Q +D+G Sbjct: 549 FLSQLSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFPHQRVIDDG 608 Query: 590 G--RLEEERRLAYVGVTRAMQKLTLTYAETR-RLYGKEVYHRPSRFIGELPEECVEEVRL 646 LEEERRL YVG+TRA +L LTY R G PSRF+ E P VEE + Sbjct: 609 DLAGLEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSRFLDEFPAGLVEEWEV 668 Query: 647 R 647 Sbjct: 669 E 669 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 228/661 (34%), Positives = 330/661 (49%), Gaps = 31/661 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L SLN +QR AVAAP +LV AGAGSGKTRVL RIA+L+ SP +I+A+TFTNK Sbjct: 8 LFASLNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNK 67 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAH--HMDANLPQDFQILDSEDQLRLL 123 AA EMR R+ + G S G+ GTFH + +LR H + DF I ++Q+ L Sbjct: 68 AAREMRQRLRDMPGVSIRGLTAGTFHSVCASVLREHIAGRIGSYTADFTIYAEDEQVHLA 127 Query: 124 KRLIKAM-NLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 + A P + + +I+ K L P + + + + YQ YQ + Sbjct: 128 SAALDAARERPPALLEPEELLRHISRAKSRLLTPRLAARFARDDLARFVAGCYQRYQRSL 187 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT- 240 +RA +DF +L+L H L+ P +L + R+ ++L+DE+QDT+ Q+A + LL + Sbjct: 188 ERANALDFDDLILLTHRLFSEHPDVLDACQSRWRHVLIDEYQDTDPAQHALVELLTRPSP 247 Query: 241 -----GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + VGD Q+IYG+R A I RF DFP A I L NYRS IL AA A Sbjct: 248 ANGGVRSLFAVGDGMQAIYGFRNADHTIISRFERDFPDARVIELATNYRSRQPILDAAYA 307 Query: 296 LIENNNGRLGKKLWTDGADGE-------PISLYCAFNELDEARFVVNRIKTWQDNGGALA 348 +I ++ L + P+ + A + DEA V I G Sbjct: 308 VIRHSRTVQPMALRATKPETPRGVGYTSPLQIVDAKDARDEAERVARSIADLLRQGRRPQ 367 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 E A+LYRS SR E AL A +PY + G FF+R ++DAL+YLR+I N D + Sbjct: 368 EIAVLYRSRHMSRAFESALRHARIPYALRGATGFFDRAVVRDALAYLRVINNPADTLSLN 427 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL 468 R+ N P RG+G +L + + R LTL A L +AA ++ L+ Sbjct: 428 RIANVPPRGLGANSLVTLSAFAGQRGLTLADALIHPEALALLPSKAAEGARQLAALLTRW 487 Query: 469 AQETAD-MPLHVQTDRVIKDSGLRTMYEQE-KGEKGQTRIENLEELVTATRQFSYNEEDE 526 + + V++ +G + EQ + E +L+EL A Sbjct: 488 RRLAESALSPDHLLADVLERTGYQAWLEQRLEPENVPDARAHLQELANAAA--------- 538 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 D L AFL AL D +D VQL T+H+AKGLE+P VF+VG+EEG+ P + SL Sbjct: 539 DHTALNAFLQEVALLTSADDNDEERDRVQLSTIHAAKGLEWPIVFVVGLEEGVLPHEHSL 598 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 ++EERRL YV +TRA ++L L++A +R + +PSRF+ ++ E R+ Sbjct: 599 VTPEGVDEERRLCYVALTRAGEQLYLSWAASRV---RGKLAKPSRFLNDIEAYGRERARV 655 Query: 647 R 647 + Sbjct: 656 K 656 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 365/722 (50%), Gaps = 47/722 (6%) Query: 1 MDVS-YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD +L +LN Q+ A + + LL+LAGAGSGKT+ L R+A+L+ V + + Sbjct: 2 MDFEKSILGNLNGVQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTLT 61 Query: 60 VTFTNKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKA+ EM+ R +L+ + + TFH LR H DF +LDS++ Sbjct: 62 LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 L K+L I+ K+ + + + K Y+ YQ Sbjct: 122 VKTLCKQL-----------KISNFRASISQIKNGMMDL-------SMQDSECYKAYELYQ 163 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 A + LVDF +LL + ++ + I + E + I+VDE+QDTN +Q +++ L+ Sbjct: 164 NALKKDNLVDFDDLLFLSLKILQDNETIAKETSEHYHYIMVDEYQDTNALQLEFLKKLSF 223 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYG+RGA + NI F F GA+ ++LE NYRS++ IL+ AN+LI Sbjct: 224 THHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLIS 283 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 +N R K L + + + + +E+ V +IK G L AILYR N Sbjct: 284 HNQHRHVKTLQSFKGSHKSVICKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNG 343 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR +EE+L ++PYR+ G + F+ER E+KDAL+++ ++A ++D +RV+N P RG+ Sbjct: 344 LSRSIEESLNALNIPYRLIGAVSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNKPPRGL 403 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T + + D L L +A + + L + AL++FM +I L + ++ + Sbjct: 404 GKITQEWIFSLLDDEGLNLEEALKLGAFKDKLNPKNEYALKKFMAMIGRLRE-AFEISVE 462 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 R ++++ L YE+E + + R ++EL+T ++ L FL+ + Sbjct: 463 EFCARFLEETNLLKSYEKE--DNYEEREGFVKELLTLLKEHFKTNPTH---SLLDFLNES 517 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L+ V M++H +KGLEF VF++G+EEG FP ++ LEEERRL Sbjct: 518 VLDV---HNAENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPH-RGFNQESDLEEERRL 573 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 AYV +TRA + L L+Y + R +G+++ PS F+ E + +++ + Sbjct: 574 AYVAITRAKEGLQLSYVKERSYFGRKISCSPSVFLEE--AQLLQQDKPPKQDH------- 624 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 + D+ K+G ++H FG G ++ +E L++ G + A + +E Sbjct: 625 ------KKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISAKF--VE 676 Query: 719 SV 720 V Sbjct: 677 KV 678 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 249/660 (37%), Positives = 349/660 (52%), Gaps = 11/660 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + D LN +QR AV S LLV+AGAGSGKT V+ +IA+L+ + ++ AVTFTNK Sbjct: 1 MFDQLNPQQRAAVLYLDSPLLVIAGAGSGKTGVITEKIAYLIESAHYDAPNVCAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R + G+ + TFH L +L AN + F I D D L LL+ Sbjct: 61 AAREMLARSRARLKKRAHGLTIATFHRLGLMMLERDFAKANRRRGFSIFDQHDSLTLLRE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDR 183 L ++ R+ +I++ K+ + P S + K+Y AY E Sbjct: 121 LCH----NDDDAFLRRMQQHISAFKNANVLPEETASLMIDDETAAQAAKIYCAYCERLQA 176 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +LLL L + ++E+ + VDE+QDTNN QYA ++L+ G G + Sbjct: 177 YNAVDFDDLLLLPTRLLKTDAAVRGFWQEKIRYLFVDEYQDTNNCQYALMQLIVGAGGAL 236 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIY WRGAQV+N+Q D+P I+LEQNYR IL AAN LI +N Sbjct: 237 TAVGDDDQSIYAWRGAQVKNLQYLQEDYPQLHIIKLEQNYRCHHKILQAANTLIAHNPHL 296 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRV 362 + K+LW+ G+ + ++ A N+ EA + + I + A A+LYRSN Q+R Sbjct: 297 VEKRLWSQLERGDGVCVFAARNDEAEAERIASAIYQQKLRTQAAWQNFAVLYRSNFQARA 356 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E+AL S+PY+I GG F+E EI+D L+YLRLI N DDAAF R+ N P R IG +T Sbjct: 357 IEQALRDVSIPYQISGGTSFYEHSEIRDLLAYLRLINNPEDDAAFLRICNVPKREIGTKT 416 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L V+ + + RQ L+ A EL L+ RAA ++Q+F + I+ +E Sbjct: 417 LTVLGEYAAKRQCCLFYAATELGLATLLSARAAMSVQQFCQWIEEKQKEAETALPSALLQ 476 Query: 483 RVIKDSGLRTMYE-QEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 VI + R E E K + R +EEL+ + EE+E L + H L Sbjct: 477 TVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLVRL---EEEERYQSLAGLMRHVLLL 533 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 D +D VQLMTLH+AKGLEFP V+I G+EE + P + + EERRL YV Sbjct: 534 DILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEEDLLPHHHCGESEEAIAEERRLLYV 593 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA +LTL+YA+ RR SRF+ ELPEE ++ R + +++ Sbjct: 594 GMTRAKFQLTLSYAKQRRHGKNWEASTASRFLQELPEEGIDWQDGRRAIDEQALNEKREE 653 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 230/732 (31%), Positives = 376/732 (51%), Gaps = 31/732 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL LN KQ EAV + + V+AGAGSGKTR L HR A+L++ P +I+ VTF Sbjct: 29 LDQLLCQLNQKQLEAVTSTEGFIRVIAGAGSGKTRALSHRFAFLVNEIGILPGNILCVTF 88 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMRHRI L+ + G ++ TFHG +L+ P++F +LD++D + Sbjct: 89 TNKAANEMRHRIHNLIADNDTG-YINTFHGFCVSILQEDSHAVQYPKNFLVLDNQDIDSM 147 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK---------- 172 LK + + L + +A I K E +++ ++ QK Sbjct: 148 LKIIYEERGLTLRHKTFSKARDMIEMYKLERYPNYYLDLITMSLDTLRQKYLGATDVNDI 207 Query: 173 VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 ++ Y + +D+ +LL + ++ I +++R I++DEFQD + IQY Sbjct: 208 IFYGYLYQEKKCFGLDYNDLLKFSLYIFEKNKEIRLKWQKRLEYIMIDEFQDIDKIQYQL 267 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 +++L G + IVGD DQ+IY WRGA + + F FP +TI + +NYRST ILS Sbjct: 268 MKVLCGYHKNLFIVGDPDQTIYSWRGADINYLLNFDKAFPDVKTIMMNENYRSTPQILSV 327 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAI 352 N+LI+ N R+ K L + Y +E+ ++ ++I + + I Sbjct: 328 CNSLIDKNKNRMKKDLLPMCHSKNSVLYYHGDTSEEESDWIADQIIKLHKKDISYKDITI 387 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR++ +R LEE LL+ +PY IY G++FFER E+KDALSYLR+I DD +F R+VN Sbjct: 388 LYRAHYVTRTLEETLLKKKIPYSIYSGIQFFERMEVKDALSYLRMIT-YKDDLSFLRIVN 446 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P R IG + ++ ++ + ++A +E +++ G A + F+ LIDA + Sbjct: 447 VPKRNIGKKRMEFLQAYVNAHHCSFYEALKECVEDPIFKGTDA---KDFISLIDAFSVTY 503 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + ++ SG M + Q R++NL EL A + + +E L+P Sbjct: 504 EQRTISEVLSDILDRSGYEEML---RTTGNQERLDNLAELKQAVYDYEISCGEEALLP-- 558 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 +L H AL D D V+LMT+H+AKGLEFP VF+ + EG+FPS+ + + Sbjct: 559 DYLDHIALFTNSDVTDD-SDKVKLMTVHAAKGLEFPHVFLCALNEGIFPSKKT-STIEGM 616 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR-----LR 647 EEERRLA+V ++RAM+ L L+ + + G Y PSRFI ++ ++ +E V+ L Sbjct: 617 EEERRLAFVAMSRAMKSLFLSESHGKNFDGSTRY--PSRFILDIDQKFLEYVKKPEDTLI 674 Query: 648 ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 A + + + +++G ++ H FG+G I ++ + + + F+ Sbjct: 675 AETKNYIHYSNRYLDGYVAEQTFQVGDKIIHNVFGQGRIKSI--LSDRNAYMIKFEQIET 732 Query: 708 KWLVAAYARLES 719 +++ ++ Sbjct: 733 PRIISFRVPIKR 744 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 252/686 (36%), Positives = 364/686 (53%), Gaps = 51/686 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + L L +Q EA +AP ++VLAGAG+GKT L + ++VE S I+AVTF Sbjct: 62 FTVLTQGLTPRQIEAASAP-GAVVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTF 120 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA+EM RI + W+GTFHGL R LRA A L +F+ILD++D RL Sbjct: 121 TNKAASEMSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRL 180 Query: 123 LKRLIKAMNLDEKQ-------WPPRQAMWYINSQKDEGLRPHHIQSY-----------GN 164 +KR+++++NL+ + P ++ + I+ KD L P +Y G Sbjct: 181 IKRIMQSLNLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQKKIAEANAIGE 240 Query: 165 PVEQT----WQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVD 220 P+ ++Y YQ+ DF +LLL L + RF IL D Sbjct: 241 PIHPASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRDAAYRTRWARRFDCILAD 300 Query: 221 EFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLE 280 E+QD N QY W+R LA + ++ VGDDDQ+IYGWRGA + I+RF DFP A IRLE Sbjct: 301 EYQDVNYAQYQWLRALAFEHHRIFCVGDDDQAIYGWRGADITYIRRFTQDFPQASVIRLE 360 Query: 281 QNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW 340 +N+RST IL++ANA+I + RLGK L+T+ G+PI + EA +V IK Sbjct: 361 ENFRSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVVAYRYCDGEAHGIVEEIKKR 420 Query: 341 QDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 G AE AILYR+N SR EE L++A +PY I G + F++R EIKD L++LR+ Sbjct: 421 HAEGVDFAEMAILYRNNFFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTLAFLRIATT 480 Query: 401 RND---DAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASA 457 +D D A RV+N P RG G + + ++ + + R L+L++A + L+ A Sbjct: 481 PDDRQSDEALRRVINEPRRGFGKKAMAILEEEANFRHLSLFRAI----ETATLSSACRKA 536 Query: 458 LQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 F+ I+ +A++ + + L Q ++ +G R M + K E G+ R+EN+ EL+ Sbjct: 537 GLMFVAAIEKVAKDPS-LTLADQLSLLLDATGYRAMLQASKAEDGKARLENISELLHLAG 595 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEE 577 F E L HAAL + + + ++LMTLH +KGLEF VF+ G E+ Sbjct: 596 SFHDAHE---------LLDHAALASSRPNENE-EGRLKLMTLHKSKGLEFEHVFLPGWED 645 Query: 578 GMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 G+FP+ S L+EERRLAYV +TRA ++ +TY E RR PS FI ++P Sbjct: 646 GIFPAGNS-----DLDEERRLAYVAITRAKRRAAITYCEYRRG-----LADPSSFIADIP 695 Query: 638 EECVEEVRLRATVSRPVSHQRMGTPM 663 + E LR PV +R Sbjct: 696 PQHRIEGWLRDDGLPPVQRERKANAW 721 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 234/684 (34%), Positives = 362/684 (52%), Gaps = 21/684 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD LN +Q++AV LL+LAGAGSGKT VLV R L+S I + Sbjct: 1 MD---WFKGLNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICVL 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++HR+G +G+S GMW GTFH ++LR H A L F I+D D Sbjct: 58 TFTNKAARELKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDCN 117 Query: 121 RLLKRLIKAM-NLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 ++K LIK + N + ++ + + IN ++ G+ P + + + + + + Sbjct: 118 AIVKDLIKDIKNSGKDKFDADKILNMINDRR-TGMAPQ--TEAFDEYHEMVEVLTPKFTK 174 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + G+VDF LL++ L+ P IL+ + FT ++VDEFQDTN +Q I + Sbjct: 175 RLEHLGVVDFEGLLIKPITLFKENPEILEKVQGMFTQVMVDEFQDTNRLQMDLIAQIVKS 234 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQSIYGWRGA+V+NI F +F E I+LE+NYRS++ IL+ ANA I Sbjct: 235 HNNIAVVGDDDQSIYGWRGAEVKNILNFPQEFTPCEVIKLERNYRSSAEILAVANAAISK 294 Query: 300 NNGRLGKKLWTDGAD--GEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 N R GK L A+ G+ L+ E DE FVV I +Q G + + A+LYRSN Sbjct: 295 NKNRHGKILRPQVAEDTGQLPELFILDREEDECEFVVTEILNFQRQGYSYKDMAVLYRSN 354 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q ++E +L +A++PY I GG F+R+EIKD ++YL+ N + + R++N P+RG Sbjct: 355 TQGGLIESSLRRANVPYHISGGTSIFDRREIKDLMAYLKQALAPN-EVSLRRIINVPSRG 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-- 475 IGD +++ + + + +++ ACR QE + +A +A+ M I+ L + D Sbjct: 414 IGDTSIEKLSEFALKKRINFVDACR-FWQEAGVQDKAGAAIDDLMMFIENLPKNILDFQV 472 Query: 476 --PLHVQTDRVIKDSGLRTM-YEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + ++ +D G R Y + + E++ D+ ++ Sbjct: 473 GSSPGAKMVQIFQDIGYREYVYGTAADPTSAEKKWMVVEILGRILDSFLGRRSYDVENIK 532 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 +F+ L + + ++ VQLMTLH++KGLEFP V + G+EE + P + G + Sbjct: 533 SFVD-CMLLRDDLSEEELENKVQLMTLHASKGLEFPVVILAGLEEDLLPHKNL---GSDI 588 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 +EERRL YVGVTRA ++L ++ + R+ G PSRF+ ELP+E E L A Sbjct: 589 DEERRLFYVGVTRAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARPVV 648 Query: 653 PVSHQRMGTPMVEN-DSGYKLGQR 675 + + + DS G++ Sbjct: 649 GQEREDLVASFLSKLDSKLGTGKK 672 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 657 bits (1696), Expect = 0.0, Method: Composition-based stats. Identities = 235/725 (32%), Positives = 365/725 (50%), Gaps = 30/725 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN QREAV A + V+AGAG+GKT L HR A+L++ P +++ TFTNKAA Sbjct: 42 RLNAAQREAVTATEGYVRVIAGAGTGKTLALAHRFAYLVNELGIMPGNVLCATFTNKAAG 101 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EMR RI +L G + G ++ TFHG +L+ P+ F +LD+ D +L+ + + Sbjct: 102 EMRRRIRRLTGDNDTG-YINTFHGFCVSVLQEDGHALQYPKSFLVLDNADIDAMLQVIYE 160 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK----------VYQAYQ 178 L + +A I K + ++ P+E QK ++ Y Sbjct: 161 ERGLTLRDMTFSKARDMIEIMKLKERPGYYRDMLAMPLEGLRQKYLDATDARDIIFYGYL 220 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +D+ +L++ L+ P I +++R I+VDEFQD + +Q+ + +LAG Sbjct: 221 YQEKKCFGLDYNDLIVFVLYLFEQNPDIRLKWQKRLEYIMVDEFQDIDGLQHELMEVLAG 280 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQ+IY WRGA V + F FPG T+ + +NYRS +++ AN+LIE Sbjct: 281 YHKNLFVVGDPDQTIYTWRGADVRYLLDFDKRFPGTRTVMMLENYRSAPRVVAVANSLIE 340 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N R+ K+L + P A + EA ++ G A + A+LYR++ Sbjct: 341 KNRERVPKRLAAMRSVHGPTVWRHAKSPDGEAAWIAQGALALHGEGVAYRDMAVLYRAHY 400 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR +EEALL+A +P+ +Y G+ FF R+EIKDALSYLRL+A DD F RV N P R + Sbjct: 401 ASRPVEEALLRAEVPHAVYSGVPFFGRREIKDALSYLRLVA-YQDDLDFARVANAPKRNL 459 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G R + +R+ + + +L++A + + + ++ ++L+D P+ Sbjct: 460 GARRMAFLREKADELGCSLFEALERFVDDDLFK---RTKARQLLQLVDRFRSSYEGRPVS 516 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+ +SG + E Q R++NL EL + +F +E + L+ +L+H Sbjct: 517 EVLAAVLSESGYERAL---RTEGSQERLDNLAELKQSVYEFETTCGEE--VTLEHYLAHT 571 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL D QD V+LMT+H+AKGLEF VF+ M EG+ PS D +EEERRL Sbjct: 572 ALLTNADAMDDAQDKVRLMTVHAAKGLEFAHVFLCSMTEGVLPS-RKTDTPQGMEEERRL 630 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 A+V +TRA L LT AE R G Y PSRF+ ++ +E A + Sbjct: 631 AFVAMTRARDGLYLTEAEGRGHEGAPRY--PSRFLLDIDPAALEFSNKPAERELDDARAA 688 Query: 659 MG-----TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + D+ + +G RV HA FG G ++ ++ +VAF ++ Sbjct: 689 YALADRWIADLVRDARFAVGDRVTHAAFGSGRVLAVDSQ--KRAYEVAFDDLDTPRTISF 746 Query: 714 YARLE 718 A+LE Sbjct: 747 KAKLE 751 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 216/683 (31%), Positives = 342/683 (50%), Gaps = 58/683 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ +LD LN Q AVA+P L VLA GSGKT+ L R+A+L++ P ++ TF Sbjct: 1 MAPILDGLNSAQTAAVASPAPILQVLAPPGSGKTKTLTARVAYLLAHHGYRPQDVICCTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 T KA+ EMR R+ +L+G Q + +GTFH + R L + L + F I DS D L Sbjct: 61 TIKASREMRERLAKLIGDELQKKLILGTFHSICRRYLVTYGYLIGLKKGFGIADSGDSLA 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-----VEQTWQKVYQA 176 ++KR++K + + P A I+ QK G+ P + + N ++ + +VY+ Sbjct: 121 IIKRIVKRLQVG---IQPNAARARISHQKAHGVSPDELAAKLNKNSKVLEQREFVQVYRE 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y+ + L+D+ +LL+R EL P + + + +LVDEFQDTN+IQY + L Sbjct: 178 YEANLAASNLLDYDDLLVRCVELLRKHPQCVSNVQA----VLVDEFQDTNHIQYELMNLF 233 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A ++ +VGD DQSIYG+R A+++N+ R + + LE NYRS+ ILS+A + Sbjct: 234 ASQNQRITVVGDPDQSIYGFRSAEIKNLGRMQQLYKDTSIVLLEDNYRSSGCILSSAQDV 293 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD---NGGALAECAIL 353 IE ++ R KKL + G L N EA ++V IK ++ AIL Sbjct: 294 IEQDSSRPAKKLQPTHSLGTMPVLRKLPNSESEALWIVLEIKRCIALTGKLVNYSDFAIL 353 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 RS A SR +E + + +PYR+ GG+RFF+R EIK L YLR+I+ + A R++N Sbjct: 354 LRSAALSRQIEAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDALLRIINV 413 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDAL 468 P+R +GD +++++ + + + LW +++ Q EK+L+ A + L + LI++ Sbjct: 414 PSRKLGDESVNLLTKGAEKAKKPLWDFIKDVAQGRSSTEKSLSKPADNGLCTLVGLIESA 473 Query: 469 AQETAD----MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ------ 518 Q+ + D +IK R + G + R N+EEL+T Sbjct: 474 RQKLCECTDGSSPRKLLDFLIKKLSFREYLKALHGSNEENRWANVEELLTQADDTPGPEN 533 Query: 519 -------------FSYNEEDEDLMPLQAFLSHAALEAGE-----GQADTWQDAVQLMTLH 560 + L FL++ AL + + + V + T+H Sbjct: 534 EAENDENLPEIQGLEQQQAHPGEEALSRFLANVALSTEVLPQEGEEGEQSDEKVTISTIH 593 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 +AKGLE+P VF+ + G+ P + D +EERRL YV +TRA L L+Y + Sbjct: 594 AAKGLEWPVVFVPAVLNGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSYPLRQSR 649 Query: 621 YGKEVYHRPSRFIGELPEECVEE 643 G+E S F+ P + VEE Sbjct: 650 DGEEATL--SSFL---PSKLVEE 667 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 653 bits (1686), Expect = 0.0, Method: Composition-based stats. Identities = 218/667 (32%), Positives = 347/667 (52%), Gaps = 25/667 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND QR AV AP VLAG GSGKT VL+ R+A L+ P I+ +TFTNKAA E Sbjct: 1 LNDDQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHELKTPPREILCITFTNKAARE 60 Query: 70 MRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRLLKR 125 +R R+ +G + + GTFH +A R+LR H +F I D++D ++++ Sbjct: 61 LRERLRDKIGDAAAREITAGTFHSVAARMLRRHGDRIPGIGRTGEFTIYDADDSKQIVQG 120 Query: 126 LI-KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 ++ +K P +I++ K + P + + + Y Y+ +A Sbjct: 121 VLVNKFGETKKTAQPGPMRNWISTSKSCPIPP--------MSHERFVECYDEYELGLRQA 172 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LL + P + +Y R++ +LVDEFQDT+ QY IR L+ G V Sbjct: 173 NAFDFDDLLSATVAMLEMCPDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVF 232 Query: 245 IVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRST+ I+ AA A+I+ + Sbjct: 233 VVGDADQAIYGWRGAEVANIRTQFDEDFKDVQTHMLTTNYRSTATIVEAAQAVIKESAFP 292 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRSNAQSR 361 L + G +++ A ++ +EA F+ + +E A+LYR+N+Q+R Sbjct: 293 SPLDLVANTPGGRDVAIVEANDDREEAEFIALEARKSVKEDPDLRYSEIAVLYRTNSQAR 352 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEEA ++A +P+++ G F+ R+EIKD ++YLR+++N D + R++NTPTRGIG+ Sbjct: 353 VLEEAFIRAGVPHKVIGDTSFYGRKEIKDMIAYLRVVSNSADTVSLNRIINTPTRGIGNS 412 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + T +E L RA SA+ +F +L+ ++ Sbjct: 413 TIEKLSAWIDTLPKTDGTELLPSAEEMGLTTRARSAVLKFSQLMAETREKAKSSTPGELL 472 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE-----DLMPLQAFLS 536 + +IK +G T+ + + G R ++EL+ ++ + ++ L L +FL Sbjct: 473 EAIIKCTGYDTLVQ--DADDGNERWAFVQELINLAKEPPQDIDETIQDRVGLEALGSFLE 530 Query: 537 HAALEAG-EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +L E + + D V+LMT+H++KGLEF VFI G+EEG+ P + D +EE Sbjct: 531 GISLLTSAESKEEEGGDTVKLMTMHASKGLEFNSVFISGVEEGLIPFVRNGDSEDDQDEE 590 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKE-VYHRPSRFIGELPEECVEEVRLRATVSRPV 654 RL YVG+TRA +KL L +A RR +G+ R S + + + +VS P Sbjct: 591 VRLFYVGITRAKRKLMLCHARERRRFGQSAQPARRSFLLDSISAMLTGSKKPERSVSIPS 650 Query: 655 SHQRMGT 661 + + T Sbjct: 651 TSRGKAT 657 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 228/726 (31%), Positives = 367/726 (50%), Gaps = 42/726 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD +L+SLN Q+EA + LL+LAGAGSGKT+ L R+A+L+S+ + + + Sbjct: 1 MD---ILESLNAAQKEAAIHVDNALLILAGAGSGKTKTLTTRLAYLLSI-GIPAQNTLTL 56 Query: 61 TFTNKAAAEMRHRIGQLMG----TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 TFTNKAA EMR R +L+ + TFH L+ + + F ++D Sbjct: 57 TFTNKAAREMRERALKLIESMSIPMINTPLLCTFHKFGLLFLQRYIHLLSRNSMFNVIDE 116 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQA 176 +D+ ++++ + K K+ P I+ K+ + P + + ++ +YQ Sbjct: 117 DDKRKIIRNIKKNSKNIAKELTPATLSSAISDYKNNAILPDIAKQSPSMIDAQVAMIYQK 176 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y++ LVDF +LLL + + + ++ I+VDE+QDTNN+Q + ++LL Sbjct: 177 YEDYLYANNLVDFDDLLLLPYRILYENETLRTQISNKYQYIMVDEYQDTNNLQASLLKLL 236 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + +VGDDDQSIY WRGA +ENI F F + ++LEQNYRST IL+ AN L Sbjct: 237 CATHENLCVVGDDDQSIYSWRGANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNL 296 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I +N R K L +G+ + + ++ E + ++ I+T G + + AIL+R Sbjct: 297 ISHNTTRYDKILKATRHNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGESYNDIAILFRL 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N +R +EE + + +++ G +RF++RQEIKD L+YLRL N +D+ + ER++N P R Sbjct: 357 NTFARHVEECFNRTKISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPKR 416 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAG-RAASALQRFMELIDALAQETADM 475 IG++T + S + + ++ L+ + + L F LI++L + Sbjct: 417 SIGEKTFGDIVAAS-----MHYTSIYAAWKQGGLSSLKCHAKLSEFFTLIESLRECLQLN 471 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP----L 531 P + K + E + R +N++EL F E D + Sbjct: 472 PSEIPHFFKTKIKLYADDIPTKDSESNEDRRKNMDELFATLLDFIECERGGDYASNEEII 531 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP----SQMSLD 587 QAFL+ AL + D+ + V M++H++KGLEF VF++GME+G+FP +MS+D Sbjct: 532 QAFLNDIALSSSSDIEDS--NHVLCMSVHNSKGLEFKHVFVIGMEQGLFPLMNFYEMSID 589 Query: 588 ----EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 L+EERRLAYV TRA LTL+YA+ R +G+ PS+F+ E Sbjct: 590 SVDKNTQNLDEERRLAYVAFTRAKDTLTLSYAKKRMHHGRYREFEPSQFLVE-------- 641 Query: 644 VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 + V + + + +G K G V+H FG G I ++ G G++S V F Sbjct: 642 ----SGVVSKQNARLRDEESDKCVAGLKRGDCVQHKIFGFGRIESVRGLGDNSTAMVNF- 696 Query: 704 GQGIKW 709 G K Sbjct: 697 -GGTKR 701 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 223/674 (33%), Positives = 346/674 (51%), Gaps = 49/674 (7%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LND QR AV AP VLAG GSGKT VL+ R+A L+ E P I+ +TFTNKAA Sbjct: 72 GLNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREILCITFTNKAAK 131 Query: 69 EMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRLLK 124 E+R R+ +G + + GTFH +A R+LR H +F I D++D ++++ Sbjct: 132 ELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIGRTGEFTIYDADDSKQIVQ 191 Query: 125 RLI-KAMNLDEKQWPPRQAMWYINSQKD-----------EGLRPHHIQSYGNP--VEQTW 170 ++ +K P +I++ K + LR P +Q + Sbjct: 192 SVLVNKFGESKKTAQPGPMRNWISTAKSCVKHSVGLRGSQMLRALEDAKKPIPPMSQQRF 251 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 ++Y Y++ +A DF +LL + P + +Y R++ +LVDEFQDT+ QY Sbjct: 252 VELYDEYEDGLRQANAFDFDDLLSATVAMLEMCPDVRAYYERRWSQVLVDEFQDTSTTQY 311 Query: 231 AWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSNI 289 IR L+ G V +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRSTS I Sbjct: 312 ELIRKLSQPQGSVFVVGDADQAIYGWRGAEVANIRTQFDQDFKEVQTHMLTTNYRSTSTI 371 Query: 290 LSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALA 348 + AA A+I+ ++ L G +++ A ++ +EA F+ + QD+ + Sbjct: 372 VEAAQAVIKESSFPSPLDLVAHTPGGRDVAIVEANDDREEAEFIALEARKLVQDSDLRYS 431 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 + A+LYR+N+Q+RVLEEA ++A +P+ + G F+ R+EIKD ++YLR+++N +D + Sbjct: 432 DVAVLYRTNSQARVLEEAFIRAGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSSDTVSLN 491 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLT--------------LWQA-------CRELLQE 447 R++NTPTRGIG+ T++ + + W+ E Sbjct: 492 RIINTPTRGIGNSTIEKLNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGEQSELLPSADE 551 Query: 448 KALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIE 507 L RA +A+ F+EL+ A Q + + VIK +G TM + G R Sbjct: 552 MGLTARARTAVLNFVELMRACQQTAMNATPGELLEDVIKRTGYETMVL--DADDGVDRWA 609 Query: 508 NLEELVTATRQFSYNEEDE-----DLMPLQAFLSHAALEAGEGQAD-TWQDAVQLMTLHS 561 ++EL+ ++ + ++ L L AFL +L D T D +LMT+H+ Sbjct: 610 FVQELINLAKEPPRDVDETIQDRVGLEALGAFLEGVSLLTSAETDDVTGGDKAKLMTMHA 669 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 +KGLEF VFI G+E+G+ P + D +EE RL YVG+TRA +KL L +A RR + Sbjct: 670 SKGLEFDTVFIAGVEDGLIPFIRNGDSDDDQDEEVRLFYVGITRAKRKLMLCHARERRRF 729 Query: 622 GKEVYHRPSRFIGE 635 G+ F+ + Sbjct: 730 GQSPQAARRSFLLD 743 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 245/648 (37%), Positives = 353/648 (54%), Gaps = 24/648 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN+ Q +AV LLVLAGAGSGKTRV+ RIA L+ + ++I AVTFTNKAA Sbjct: 7 SGLNEAQYQAVYYRNGPLLVLAGAGSGKTRVITERIAALVE-RDVPDHAITAVTFTNKAA 65 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ Q +G G+ + TFH L ++R H + + +Q +++ ++ Sbjct: 66 KEMRERLQQRLGDKANGLRICTFHALGLAMVREHADLVGRKANVSVFAGAEQKTVMRSVL 125 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 M L + + ++S K L H E + + Y ++ V Sbjct: 126 SEMKLAADADQVDRMLSRVSSLKSGLLEVH---------ENQLAAIRETYDALLEKMNAV 176 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL+ L ++ +RER LVDE+QD++ IQY +RLL D G + +VG Sbjct: 177 DFDDLLVLPLRLLSEHDNVRAIWRERARYFLVDEYQDSSRIQYQLVRLLVPDDGNLTVVG 236 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA+V+N+ + D+ +RLE+NYRST +IL A+N+LI NN+ RLGK Sbjct: 237 DDDQSIYGWRGAEVKNLFQLERDYTNLHVVRLEENYRSTGSILQASNSLIANNSERLGKT 296 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEA 366 L + G+PI ++ + N +EAR + IK+ +GG +LYR++ QSR +E A Sbjct: 297 LRSTLGQGKPIRVWGSPNPEEEARRLAGDIKSHHARSGGQWDAYCVLYRASFQSRSIELA 356 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L +A +PY + GGM FF+R EI+D L+YLRLIAN +DD AF R + P RGIG + L + Sbjct: 357 LREAGIPYHVSGGMSFFDRAEIQDILAYLRLIANFSDDLAFMRAIARPRRGIGSKALGDL 416 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 + +L +AC + + L + A AL+ F ++I L + D V+ Sbjct: 417 GFFAMAEDCSLLEACLK----EELDHKRAEALREFGDMIVGLEHQFRHGEPDDAFDAVLD 472 Query: 487 DSGLRTMY--EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + L E + E + R+ N+ EL + D L FL H L A E Sbjct: 473 LTRLEAAIRAEADDQEVAERRMSNVLELRRWWVIHTERGGD-----LTEFLQHIFLLA-E 526 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 Q D V+LMT+H+AKGLEF QV+++GMEEG+FP + +LDE R+EEERRL YV +T Sbjct: 527 KQDDDPSGQVRLMTVHAAKGLEFDQVYVIGMEEGIFPHRNALDE-NRMEEERRLMYVAMT 585 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 RA LTL+Y+ TRR +G PS F+ E + + V A Sbjct: 586 RARFLLTLSYSLTRRRFGTIEKCAPSPFLKEPDQSVLRWVDKDADSEE 633 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 223/648 (34%), Positives = 356/648 (54%), Gaps = 15/648 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 N+ Q++A++ L+LAGAGSGKTRV++++I L+ + + P I A+TFTNKAA E Sbjct: 3 FNEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACE 62 Query: 70 MRHRIGQLMGTSQGGMW-VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ RI ++ + + + TFH L ++++ N+ +F I D +DQ+ +L+ ++ Sbjct: 63 MKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVS 122 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDRAGLV 187 E + RQ I++ K++ L P+ + N +E + + Y+ Y + ++ Sbjct: 123 K----EDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNIL 178 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ L + + + ++ +LVDE+QDTN IQY I+LL+ +VG Sbjct: 179 DFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVG 238 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA + N + +D+P TI ++ NYRS+ IL ANALI NN KK Sbjct: 239 DDDQSIYSWRGANIHNFESLKHDYPNLRTIIMQHNYRSSGRILKVANALISNNLHFFNKK 298 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEA 366 L+++ G + + A NE DEAR ++ + + N + AILYRSN Q ++ E+ Sbjct: 299 LFSNLDYGSIVEIISAKNEEDEARVILQTLMLHKSNYNAQYKDYAILYRSNYQVKIFEKF 358 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L++ +PY+I + FF R EIKD ++YLRLI N +D+AAF RVVN P RGIG TL + Sbjct: 359 LIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQKL 418 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 ++ S+ R + + A ++ E L +LQ F+ LI ++ + P+ V ++++ Sbjct: 419 KEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPIEVL-EKLVA 477 Query: 487 DSGLRTMYEQEK--GEKGQTRIEN----LEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + + I+N L ++ + N + + L +S L Sbjct: 478 TIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFIL 537 Query: 541 EAGEGQADT-WQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 + + D VQLMTLH++KGLEF VFIVG+EEG+ P + ++EERRLA Sbjct: 538 QNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTTMENNIDEERRLA 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR 647 YVG+TRA +KL L+YA R YG + +PSRF+ ELP+ + + + Sbjct: 598 YVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLRELPQSDILWQKSK 645 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 235/724 (32%), Positives = 373/724 (51%), Gaps = 53/724 (7%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L + LND Q++AV+ +L+LAGAGSGKT+ + R+A+L+ ++ + +TFTN Sbjct: 2 NLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLIGEVGIPSHNTLTLTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA MRHR + + + + TFH L+ H F ++D++D +++K Sbjct: 62 KAANVMRHRALNFLQGNHNPL-LCTFHKFGLLFLKLHFERLERKNSFIVIDTDDTKKIIK 120 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEG------------LRPHHIQSYGNPVEQTWQK 172 LI N D + YI+ K+EG L+ H+ + Y N E + Sbjct: 121 DLIHDKNKDN----VYDIIQYISYCKNEGKRVSNVFEDLNLLKEHNFEKYQN--EYKFAN 174 Query: 173 VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 Y+AY+E + VDF +LLL ++ + N + + + I VDE+QDTN +QY Sbjct: 175 YYRAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNYITVDEYQDTNTLQYKI 234 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 ++ L + +VGDDDQSIY WRGA++ENI F NDF + ++LEQNYRS IL A Sbjct: 235 LKNLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNVKLVKLEQNYRSVGTILQA 294 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAI 352 AN LI +N RLGK L GE I + NE DE ++ +K ++G E AI Sbjct: 295 ANNLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVKKLLNSGVEAKEIAI 354 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 L+R NA SR +EEA ++ + Y++ GMRF+ER EIKD +SYLRLI N +DD +F+R++N Sbjct: 355 LFRVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKDLISYLRLILNPSDDLSFKRIIN 414 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL--AGRAASALQRFMELIDALAQ 470 P R IG++ L + + ++ RQ++L+ A E + +A + F++ I L Sbjct: 415 RPKRSIGEKALKNLEEYAKKRQISLFDALCESDGGVGILTTKKAQNEANIFIQNIHTLKS 474 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + + + K + + G RI NL+E R+ +++ Sbjct: 475 YDNAKKVFDNIEELFKIKDYFSE-----QDDGDERIRNLDEFYANLRE---KLKEDPEAS 526 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L+ LS +L + + D ++ V LM++H++KGLEF VFI+G +EG FP + Sbjct: 527 LEDLLSEISLLSDQDNLD--EECVCLMSIHASKGLEFDYVFIIGFDEGFFPLNSEENLEE 584 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 LAYV +TRA + LT++ A +R +G PSRF+ E + + E + Sbjct: 585 ERR----LAYVAITRAKKLLTISVANSRFYHGSRANINPSRFLEE--SKLINEKSKNQNI 638 Query: 651 SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 + + + G V+H FG G +V + SG+ +L + F G ++ + Sbjct: 639 QK---------------TSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGI-MRVI 682 Query: 711 VAAY 714 +A++ Sbjct: 683 MASF 686 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 223/639 (34%), Positives = 348/639 (54%), Gaps = 34/639 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SL+ Q EAV+ + +V AGAGSGKTR L ++IA+L++ + P I+A+TFTNKA Sbjct: 3 MQSLSPVQMEAVSHVETPAIVTAGAGSGKTRTLTNKIAYLVNNLHYDPERILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ ++ G S G WV TFH ++L+ H + I D+ Q LK+ Sbjct: 63 ADEMKSRLEKITGRSAGDFPWVRTFHSACFKILKVHCELLGYRKPLLIHDASQQKAHLKK 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 ++ +NLD A I+ K+ ++ S G + + Y+ Y E ++ Sbjct: 123 VLAELNLDRHYLF--AAASLISKAKNSADPVLYLASNGRVPRRK--EAYRIYNEMLAQSN 178 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF ++LL +L P I + YR RF ILVDEFQD+N IQ I LL D G++ + Sbjct: 179 SVDFDDILLLTRDLLQKYPEIRKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKD-GRLTV 237 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDD QSIY +RGA + F + A RLE+N+RST I++A++ LI +N R+ Sbjct: 238 VGDDYQSIYQFRGANPFHFINFPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIE 297 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLE 364 K+ ++ DG+P+++ +NE EA +V +R + D E AILYR+ S E Sbjct: 298 KQCFS-RRDGQPVTVETFYNEQMEAEWVADRCRELLNDENIPYREIAILYRTKFTSLPFE 356 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 AL A +PY + G FF+R+E++D +YL N +DD +FER+VN P RGIG L Sbjct: 357 RALRSAGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDISFERIVNVPRRGIGPGALK 416 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + ++R ++L A R+ + + + +AA+ L + + L++++A+E D +H RV Sbjct: 417 KIFGC-KERNMSLRDAARKAIDGRLIPKKAAAELDKLLSLLESIAEEKPDAAMH----RV 471 Query: 485 IKDSGLRTMY--EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 +K++ + G+ +TR+EN++ ++ + +L AAL Sbjct: 472 MKETDYFAHLSTLSDDGDDLETRLENIKSMIYDAA---------GKASIPEYLEDAALIR 522 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL------EEER 596 + + V+L T+H+AKGLEF VF+V +EEG+ P + S++ + EEER Sbjct: 523 DDQDETDNGNGVRLSTIHAAKGLEFKAVFVVAVEEGILPHRKSIETESEIELERGMEEER 582 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 RL YV +TRA + L+L+ A TRR RPS F+ E Sbjct: 583 RLMYVAMTRASELLSLSAAATRRG----ELARPSPFLAE 617 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 228/715 (31%), Positives = 387/715 (54%), Gaps = 29/715 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 ++ LND QREAV + V+AGAGSGKT+ L R +L+ S +I+ TFTNK Sbjct: 5 VISGLNDAQREAVTTTEGYIRVIAGAGSGKTKALTSRYIYLVHELGISTANILCATFTNK 64 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ RI ++G + G+ +GTFHG RLL+ N P +F ++D+ED +L+ Sbjct: 65 AAREMKKRIRTMIGDNDTGL-IGTFHGFCRRLLKEDIYTINYPDNFIVMDNEDMDLVLRI 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLR--PHHIQSYGNPVEQTW-------QKVYQA 176 + + N+ KQ+ +A I+ +K++ + + I++ N +++ + +++ Sbjct: 124 VYEDANISSKQFTFSKAKDMISKRKNKDFKYISYIIETDNNELKKKFLTSKNVEDRIFYG 183 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y + +DF +L++ + P + + ++++ I+VDEFQD N QY + +L Sbjct: 184 YLYQQKKNYNLDFNDLIIFTLHILETFPKVRKKWQQKLEYIMVDEFQDVNIKQYRLVSIL 243 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD DQ++Y WRGA V I F +F G +TI + QNYRS+SNI+ A+N+L Sbjct: 244 SEYHKNLFVVGDPDQTVYSWRGANVNLILNFDKEFKGTKTIMMNQNYRSSSNIIKASNSL 303 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I N R+ K+L P+ + N EA +++N+I+ G + AILYR+ Sbjct: 304 ISKNKQRIDKELIPIKHGNIPVVYKHSENIYKEANWIINQIEQIIKGGNSYKNIAILYRA 363 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + SR +EEALL+ +PY +Y G+ F++R+EIKD LSYLR++ DD +F R++N P R Sbjct: 364 HYVSRSIEEALLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVV-FEDDLSFIRIINEPKR 422 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G + ++++R+ + D +L+ + + L++K + A S +F++LI+ + +M Sbjct: 423 NFGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLI---AKSKADKFVDLIERYKKIYKEMR 479 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + ++ +SG M + ++ R+ENL EL + + + ++ L+ +L Sbjct: 480 ITDLLMELLNNSGYEAMLRESGEDE---RLENLAELKNSISDYENSAGED--TTLEDYLQ 534 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L + +D + +MTLH+AKGLEFP VFI EG+FPS + + ++EEER Sbjct: 535 EISLFTNSDLKEN-KDTINMMTLHTAKGLEFPYVFICEFNEGIFPSART-NTKEKMEEER 592 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE-VRLRATVSRPVS 655 RLAYVG TRA L L+ AE G Y PSRFI + + V L+ ++ + Sbjct: 593 RLAYVGYTRAKNALFLSDAEGVNYDG--SYRFPSRFIFNTGKTYLNYLVELKESLIDDAN 650 Query: 656 HQRMGTP---MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 + N+ +K+G+R+ H G G I+ ++ ++S + F Sbjct: 651 EFISDSENSMNKSNNIKFKIGERIIHKLLGLGVIIGID--NDNSSYMIKFDNAET 703 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 230/652 (35%), Positives = 349/652 (53%), Gaps = 20/652 (3%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD+LN +Q++AV + LLVLAGAGSGKT V++ +I++L+ SI+AVTFTNK Sbjct: 1 MLDNLNQQQQQAVKYIATPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSILAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+ + + G+ + TFH L +L+ H + ++F + DS D L L+ Sbjct: 61 AAKEMQERVKSRLDKEKSKGLMISTFHSLGLSILKKHFNELGYKKNFTLFDSHDSLALIY 120 Query: 125 RLIKAMNLDEKQWPPRQ---AMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 + DE Q P + I+ K L P ++ + +E+ +YQ YQ+ Sbjct: 121 DIA----YDEYQLPKQNASFIQAKISFWKSALLTPDQVKPK-DELEEQAAFIYQEYQKYL 175 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 DF +L+ + +L+ N +I + + ++F IL+DE+QDTN QY ++ L Sbjct: 176 KSYNSFDFDDLIFQPIQLFRNHSNIQKLWADKFRYILIDEYQDTNESQYQLLKYLTLGKN 235 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 K +VGDDDQSIY WRG++ EN++ DF + I+LEQNYRST IL+ AN LIENN+ Sbjct: 236 KFTVVGDDDQSIYAWRGSRPENLRHLQEDFADLKVIKLEQNYRSTGRILNVANKLIENNS 295 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 KKLW++ GE I + N+ DEA+F+ + I ++ A+L RSN Q+ Sbjct: 296 HIFDKKLWSNKDYGEQIKVISLINDEDEAQFIASDIFFDRVKTKSKNSDYAVLIRSNYQA 355 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 +LE + +PY I GG FF + EIKD +SYLRLI N +DD AF RV+NTP R +G Sbjct: 356 YLLERYMQMHKIPYTISGGSSFFSKAEIKDIISYLRLIVNPDDDRAFLRVINTPKREVGS 415 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM----P 476 T+ + + + + + L + L L F +LI Q+ Sbjct: 416 ATVHKLGEYASQHHCSFFHTLYSL-ENFELRDFTKRNLISFKDLILNTQQQINTSISVQE 474 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L + I + R + + R N+ E+ +E L L Sbjct: 475 LKNIINSFIDNISYRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDESYNGLESLATV 534 Query: 535 LSHAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 L+ L D + VQ++T+H++KGLEF +V+I+GMEEG+ P Q S+++ + Sbjct: 535 LNKMLLIDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQSIED-DSI 593 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 E+ERRLAYV +TRA + LT+T + R+ +G++ PSRFI ELPE + V Sbjct: 594 EDERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPSRFIDELPETDLYWV 645 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 640 bits (1651), Expect = 0.0, Method: Composition-based stats. Identities = 217/643 (33%), Positives = 314/643 (48%), Gaps = 33/643 (5%) Query: 25 LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGG 84 +LVLAGAGSGKTRV+ RIA L+ S++A+TFTNKAAAEM R+G+L+G+ Sbjct: 1 MLVLAGAGSGKTRVVTTRIARLLD-RGIPARSMLAMTFTNKAAAEMHERVGKLVGSKVAR 59 Query: 85 -MWVGTFHGLAHRLLRAHHMDANLPQD-FQILDSEDQLRLLKRLIKAMNLDEKQWPPRQA 142 + V TFH +L A L F I D D L +++ +++ + K + Sbjct: 60 ELKVCTFHRFGLDVLGAETRALGLRGGSFAIFDQSDALGVIREILRELRAG-KSYDVSAI 118 Query: 143 MWYINSQKDEGLRPHHIQSYG------NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRA 196 + I++ K+ L + ++ VY Y A DF +L+ Sbjct: 119 LSRISNAKNAFLDAESWAEAQRQGKGIDEYDEISMLVYPRYMAALRSFQAFDFDDLICEV 178 Query: 197 HELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 LW + +L+ +R R+ ++VDE+QDTN Q +RLL G+ V++VGDDDQSIY W Sbjct: 179 VRLWQTRADVLERWRMRYRFVIVDEYQDTNRAQLELLRLLCGEHRNVVVVGDDDQSIYAW 238 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN-NGRLGKKLWTDGADG 315 RGA V NI F F GA+ ++LE NYRS IL ANA++ + R K L +G Sbjct: 239 RGADVRNILDFEEHFSGAKVVKLEHNYRSRKPILDVANAVLAKSGARRHKKSLIATRVEG 298 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALLQASMPY 374 + + + EA FV + + + A+LYRSN Q+ +E AL + +P Sbjct: 299 DKVRSIICVDPDVEASFVATEAQRLLEREAARPKDIAVLYRSNLQAAAIESALKERQIPI 358 Query: 375 RIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQ 434 R+ GG +FFER+E+KD ++YLR+ N D+ R++N P RGIGD + + + Sbjct: 359 RMIGGQQFFERKEVKDLIAYLRVALNPGDEMCLRRILNYPARGIGDAAVAKLGAYATAHD 418 Query: 435 LTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA-DMPLHVQTDRVIKDSGLRTM 493 +LW A L A ++ + +I+A P ++ D+G + Sbjct: 419 ASLWTAVSRPHAVHELTSAAIEGCRQLLRIIEATRARFERGEPSAEVARALLADAGFKED 478 Query: 494 YEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ 551 R N+E L+ + D FL AL + + Sbjct: 479 IMAGSSTANAAARRWGNIEGLLNVFARRDEK-GKGDRASFAEFLRLLALRQDS-EEEEAT 536 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE----------------GGRLEEE 595 D V L T+H AKGLEFP VF++G+EEG+ P Q SLDE G +EEE Sbjct: 537 DRVTLTTMHGAKGLEFPYVFVIGLEEGLMPHQRSLDERATDAAPSGAEGGDTGGHSIEEE 596 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 RRL YV VTRA +L LT A+ R GK V PSRF+ E+P Sbjct: 597 RRLFYVAVTRARDRLYLTRAKHRGSRGKMVPRTPSRFMLEIPP 639 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 637 bits (1643), Expect = 0.0, Method: Composition-based stats. Identities = 229/649 (35%), Positives = 357/649 (55%), Gaps = 29/649 (4%) Query: 3 VSYLLDSLNDKQREAVAAPR-SNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 V L LN +Q AV P + LL+LAGAG+GKT VL+ R+ L+ + P I+A+T Sbjct: 23 VPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMT 82 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTN+A EM++R+ +G + TFH +LR H LP DF ILDS + Sbjct: 83 FTNQAIQEMKNRLACYLGEKIPRIQ--TFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEA 180 ++K+L+K + +D+K + P + + I+ ++ G P I QS + + +Y Y Sbjct: 141 IIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAY 200 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD- 239 + DF L+++ E+ + PH+L+ Y E+ I+VDE+QD N QY +RLL Sbjct: 201 LQKTKSCDFGGLIIKTIEVL-HHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKE 259 Query: 240 ----TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 ++ VGD++Q IY WRGAQ +I F DF A I+LEQNYRST++IL+ AN Sbjct: 260 DSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANK 319 Query: 296 LIENNNGRLGKKLWTDG--ADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 LI +N R KKL+T D +S++ + ++ E ++ I Q+ G +L AIL Sbjct: 320 LISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAIL 379 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 R++ Q+R E+A L+ +P+++ GG F++RQEI+DAL+Y RL+ + D F+R++N Sbjct: 380 VRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINC 438 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG +L ++ + ++L QA +L+ + +LQ F++ I + Sbjct: 439 PKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSK 498 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEK-GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 M + +++ SG M++ K EK Q R++NL EL++ + L+ Sbjct: 499 KMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHE---------TLE 549 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 F+ A L G + +Q+MTLH+AKGLEF VFI G E+G+ P Q+S++E G + Sbjct: 550 GFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINE-GNV 608 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYG-----KEVYHRPSRFIGEL 636 E ERRLAYVG+TRA +K L Y RR + + + S+F+ EL Sbjct: 609 EGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLEL 657 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 210/656 (32%), Positives = 336/656 (51%), Gaps = 26/656 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + SLN Q EAV LL++AGAGSGKTRV+ HRIA+L+ ++ + I+A+ Sbjct: 1 MPDDFFKKSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLL-LKGIAQKEILAL 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI +++ + + V TFH L+ ++ ++F I D D++ Sbjct: 60 TFTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDNDRI 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 LLK ++ L K+ I+ K+ L + ++ +++ Y+E Sbjct: 120 SLLKEILLDEGLLNKKVSLNSLSNVISLFKNGILTLNDLKEED-------INIFRLYEER 172 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +L+L+ EL N I Y +R+ +L+DEFQDT+ IQY +IRLL + Sbjct: 173 LRLYNSFDFDDLILKPKELLSNNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLI-NH 231 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIY WRGA N+ +F D+ A+ I+LEQNYRS NIL AN++I NN Sbjct: 232 SNLCCVGDDDQSIYSWRGASYNNMLQFEKDY-NAKEIKLEQNYRSAKNILDVANSVILNN 290 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQ 359 R K LW+ + I + +E+ E+ FV ++I G + +L R+NA Sbjct: 291 KNRKEKTLWSSKMCSKVIDFFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTNAL 350 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 + +E + + Y++ GG FF+R+EIKD +SYL +I N D R++N P RGIG Sbjct: 351 FKNVEMIFKRQGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIPRRGIG 410 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQ--------EKALAGRAASALQRFMELIDALAQE 471 L +R + + ++ A ++ +K L + +++ F+ I+ + Sbjct: 411 KEYLKKIRDMADKKGCCIYDALCDIAFSFASISSYDKVLNKQVIESIEDFVSFIEEYQYK 470 Query: 472 --TADMPLHVQTDRVIKDSGLRTMYEQEKG---EKGQTRIENLEELVTATRQFSYNEEDE 526 +I+ E + + + +N+E ++ + + + E Sbjct: 471 FSIKKNTYSNIIKEMIESIEYWGFLVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQLGE 530 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L L +FL++ L++ E ++ + LMT+HSAKGLEF VF + +E+ + P + Sbjct: 531 -LRDLSSFLNYIVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRII 589 Query: 587 -DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 D LEEERR+ YV +TRA L +T A R+ + PSRFI E+P+E + Sbjct: 590 EDSELDLEEERRVFYVALTRAKDSLVITMANKRKKDRQIFEQLPSRFISEIPKEFL 645 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 236/744 (31%), Positives = 357/744 (47%), Gaps = 58/744 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN Q AV +LV+AGAGSGKTR L++R+A L+ + +P SI+ +TFT KA Sbjct: 18 LSGLNPAQHLAVTTTEGPVLVIAGAGSGKTRTLIYRVAHLLD-KGVAPESILLLTFTRKA 76 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 + EM R G+L+G + + GTFHG+A+ LLR + + F I+D D ++ L Sbjct: 77 SQEMVWRAGELLGENCSRVMGGTFHGVANMLLRQYGSHMGWGKGFTIIDRADAEGII-NL 135 Query: 127 IK---AMNLDEKQWPPRQAMWYI------NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAY 177 +K M +K++P ++ + I S E L + ++ + Y Sbjct: 136 LKSSLEMGKGDKRFPGKRIIINIISGSINKSTPMEELIHDQYGHLADHCADIL-RLGRHY 194 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 L+D+ +LL+ L P + RF ++VDE+QDTN IQ IRLLA Sbjct: 195 HTFKRDNVLMDYDDLLVNWKLLLQESPEVRSMMSHRFRYVMVDEYQDTNLIQADIIRLLA 254 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + VM+VGDD QSIY +RGA NI RF +FPGA+ I+LE+NYRST ILS N LI Sbjct: 255 SEHSNVMVVGDDSQSIYSFRGADFYNIMRFPKEFPGAKLIKLEENYRSTQPILSLTNDLI 314 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 N + + K L ++ + +Y A +E EA F++ R++ +G +E A+L+RS Sbjct: 315 ANASEKYTKSLHSNIKGEQRPIVYGARDEQAEATFILARVQQHIRDGIDPSEIAVLFRSG 374 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 S LE L A + + GG++ E +KD LS+LRL+ N D+ ++ RV+ R Sbjct: 375 FHSYKLEIGLGAAGIEFEKRGGLKLTEAAHMKDVLSFLRLLVNPRDNLSWNRVLLQLDR- 433 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG +T + T + L+ + A + +++I LA ++ + Sbjct: 434 IGPKTAQKITTTIV------------PTFDPFLSLKNYPASKASVDIIAGLADLFRELRV 481 Query: 478 HVQTDRVIKDS---GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 +T + + ++E+ + R ++LE + LQ F Sbjct: 482 TERTPAALYELVLNYYTPLFERLYSDDYPKREKDLEHFKGVIAGYD---------DLQKF 532 Query: 535 LSHAALEAGEGQADTWQDA--VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 + L+ AD D + L T+HS+KGLEF VF++G+ EG FP ++ G + Sbjct: 533 IDDTTLDPPAPTADKTPDGKRMVLSTIHSSKGLEFDAVFVMGLAEGRFPHANTVGFGPQW 592 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR-PSRFIGELPEECVEEVR------ 645 EEERRL YV TRA + L LTY ++ S ++ EL + E V Sbjct: 593 EEERRLLYVAATRARKHLYLTYPRQMMTPDRQFKRVGMSPYLVELKDMLYERVEGSSTSS 652 Query: 646 -------LRATVSRPV--SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 + RPV R P + LG RV+H FGEGT+ M G Sbjct: 653 LSRPSRFAESNSPRPVGIPAGRRSRPAGLKRADLSLGTRVKHPFFGEGTVKKMPGG---P 709 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 ++V F+ G K L YA+LE V Sbjct: 710 AIEVEFEQYGTKALHLDYAKLELV 733 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 228/729 (31%), Positives = 360/729 (49%), Gaps = 44/729 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q AV + + + AGAG+GKT L +IA+L+ + I+A+TFTNKA + Sbjct: 26 LNQTQLAAVTSNAKSFYLAAGAGTGKTTTLTAKIAYLIEQKKLPSNQILALTFTNKAVKQ 85 Query: 70 MRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQILDSEDQLRLLKRL 126 M+ ++ Q++G + G+ + TFH L ++LR + +F+ILD D ++LK + Sbjct: 86 MKEKLDQMIGKEKTKGITICTFHSLGTQILRKFIPFLPFSYRNNFKILDDNDCKKILKDI 145 Query: 127 IKAMNLDEKQWPPRQAMWYINSQK------DEGLRPHHIQSYGNPVEQTWQK----VYQA 176 +K MN+D K+ + I+ K +E H Q N + + + Sbjct: 146 LKEMNIDPKRVKISELKKSISDIKRKHEPQNEDTLQHSTQKEKNYQREKKYEFEMPIKVK 205 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ LVDF +L+L H+L ++ Y+++F +LVDEFQDT+ QY + LL Sbjct: 206 YQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQQKFQYLLVDEFQDTDFFQYQILTLL 265 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + + +VGD DQ+IY +RGA+ EN Q FLN F + LE+NYRS+ NIL AN L Sbjct: 266 AKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKFK-PKIAFLEENYRSSKNILDKANLL 324 Query: 297 IENNN-GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILY 354 I+ N K L + + GEP+ + +E R++ I+ G + + ILY Sbjct: 325 IKYNKAHLFKKNLKSTKSGGEPVICKFFADYKEETRYIAKTIQNLVLQGVYSYQDFTILY 384 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+N R LEE L ++PY+++GG F++ + +KD L+YL IAN + D F+R++NTP Sbjct: 385 RTNILGRPLEEKFLANNIPYQVFGGASFYQSKLVKDFLAYLNFIANPSQDFNFKRIINTP 444 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG +L + + ++++++TL+ + L Q + A + L +LI L Q+ + Sbjct: 445 KRGIGTTSLLHLEKLAQEKKITLFDTLKYLDQTP-IQPNAKTKLNELKKLITNLRQKLIN 503 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGE--------KGQTRIENLEELVTATRQFSYNEEDE 526 +D +I + Y ++ E + + +EEL + Q N E Sbjct: 504 DSFDCLSD-IITYIDEKIEYCRKNDETCKMQSIKDSDSDLYYIEELKSVFMQAEKNLEGS 562 Query: 527 DLMPLQAFLSHAALEAGEGQA-------DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGM 579 L L +L + + D V+L T+H KGLEF VFI E+ Sbjct: 563 IFEKLTQLLDQISLYNETNEQTEQDSKNPSKNDRVKLSTIHKVKGLEFRVVFITAFEDIF 622 Query: 580 FPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 F + E LEE RRLAYV VTRA +KL LT A R YGK++ +PSRF+ E+ Sbjct: 623 F--DCNQKEKSDLEESRRLAYVAVTRAEEKLFLTGAYQRFSYGKQIDSQPSRFLQEMG-- 678 Query: 640 CVEEVRLRATVSRP---VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 ++ R+ P +Q + ++ G +V+H G G + + Sbjct: 679 IFQKETPRSNYFSPHLFQPNQSNQASFTNGNGFFQKGDKVKHKTLGLGVVEAIM----QD 734 Query: 697 RLQVAFQGQ 705 +QV F Sbjct: 735 LIQVRFINY 743 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 210/633 (33%), Positives = 322/633 (50%), Gaps = 21/633 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 L+ +Q AV S LV AGAGSGKTR L +IA L+S P I+A+TFTNKAA Sbjct: 4 KLSPQQEAAVLHMGSPALVTAGAGSGKTRTLTAKIAHLIS-LGYPPERILAITFTNKAAD 62 Query: 69 EMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ L G + G WV T+H +++L H QI D+ Q + + ++ Sbjct: 63 EMKRRLVALTGIPETGFPWVRTYHSACYKILCVHCGLLGYTTPLQIYDTYHQRKTITDVL 122 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 MN D+K P + +I+ K+ G ++ +Y Y+ Y+ V Sbjct: 123 IRMNHDKKFVP--TILNHISKAKNSGNPGAYLDAYPFISYVRLADAYELYERMLKEKNAV 180 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL ++ + + + Y+ERF ILVDE+QDTNN+Q LL + VG Sbjct: 181 DFDNILLCVRDILRDHDDVRRRYQERFEFILVDEYQDTNNLQEDLTGLLC-RGDNLFCVG 239 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD Q+IY +RG+ + + F + A +LEQNYRS I+ AN +I+ N+ ++ K Sbjct: 240 DDWQAIYSFRGSNMRHFLSFEQRYADARVFKLEQNYRSADTIVRVANDIIDYNHDKMDKT 299 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 +++ G + +Y +E++EAR+V + + ++G A+LYR+ S E A Sbjct: 300 CFSE-ESGGTVEIYEFDDEVEEARWVARKAEELNEDGVPYDAMAVLYRTKFTSLYFEHAF 358 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 +A +PY + G F++R+E+ D SYL DD AFER++N P RG+G +TL + Sbjct: 359 RRAGIPYHLLGDRGFYDRKEVMDINSYLMAAVFEKDDTAFERIINIPRRGVGAKTLASIN 418 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 R ++L A L E+ L+ + AL M L+D + D + +R+ Sbjct: 419 D-MRTGAMSLQAAVHLALAERRLSDKVYQALSDLMALLDDIRDMRPDAAIREVIERIGYL 477 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA 547 + L+ Y ++EN+++L++A + L A+L AAL + Sbjct: 478 NYLKQ-YADAGSMDFTEKVENIDQLISAAARME---------SLTAYLEEAALIREDKDD 527 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 + V L T+H+AKGLEF VF+VG EE + P SL+E L+EERRL YV TRA Sbjct: 528 EEGGFGVNLATIHAAKGLEFHTVFVVGCEENLLPHWKSLEEEDDLQEERRLMYVAATRAA 587 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 + L LT A R K ++R SRF+ E+ Sbjct: 588 RCLFLTAAGFR----KGQFNRRSRFLFEIERSL 616 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 220/636 (34%), Positives = 345/636 (54%), Gaps = 29/636 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 L+++Q+ AV S LV+AGAGSGKTR L +I L+ + P I+A+TFTNKAA E Sbjct: 3 LSEQQQTAVLHTGSPALVVAGAGSGKTRTLTAKIMHLIG-QGFDPTRILAITFTNKAAQE 61 Query: 70 MRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ R+ +L G WV T+H + + H + QI Q +++ ++ Sbjct: 62 MKSRLYKLSGLGYAKFPWVRTYHSACLVIFKTHSHEIGYSSPIQICSIYQQKKIVTEILV 121 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 NL++K + I+ K+ + + +Y+AY++ A LVD Sbjct: 122 NNNLEKKH--AGNLISIISRAKNSANPDRYFDEHPRMGIIRVVDLYKAYEQRLFEANLVD 179 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F +LL+ ++ + P I Q Y+++FT+ILVDE+QDTNN+Q RLL GD G + VGD Sbjct: 180 FDNILLKTRDILRDFPEIQQRYKQQFTHILVDEYQDTNNLQDELTRLLLGDHGNLFCVGD 239 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 D Q++YG+RG+ V + +F N + A RLE+NYRS I+ AAN LI+ N ++ KK Sbjct: 240 DWQAVYGFRGSNVNHFLQFSNRYDNARIFRLEENYRSADEIVQAANGLIDFNADKMDKKC 299 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQSRVLEEA 366 ++ G + ++ F+E +EA +V R+K + G + A++YR+ S E+ Sbjct: 300 FSQKKGG-VVEIHEFFSEGEEAEWVAKRLKALNCKGEGIDFDKIAVVYRTKFCSLAFEKI 358 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 +PYR+ G FFER EI D SYL NDD +FER++NTP RGIG + + Sbjct: 359 FRMFKIPYRLMGAQGFFERMEILDINSYLSAAQFPNDDVSFERIINTPKRGIGPAMVKKI 418 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 T ++ ++L A R+++QE+ L + L + +EL+D+L D+P + +RV+ Sbjct: 419 G-TMKEEGMSLSGAARKMVQERVLTPKIHGELSKLLELLDSL----WDLPPNQAMERVLD 473 Query: 487 DSGLRTMYEQEKGEKGQ--TRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL-EAG 543 + +++ + + ++ EN+E+LV R+ S + +L AAL Sbjct: 474 GTAYFDYLKKKVKTEAEFISKKENIEQLVYTAREKS---------TILEYLEEAALIRED 524 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRLAYVG 602 D + V L+T+HSAKGLEF VF+VG EE +FP S+D G + ++EERRL YV Sbjct: 525 TKDEDDDGEGVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSIDAGEQAIQEERRLMYVA 584 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +TRA + L L++A R K + SRFI ++ E Sbjct: 585 MTRAERFLYLSHANYR----KGQFAMRSRFIDQIEE 616 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 224/700 (32%), Positives = 344/700 (49%), Gaps = 67/700 (9%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ +ND+Q A+ AP + + VLAG GSGKTRVLV R+ L++ P I+ +TFTNKA Sbjct: 56 LEGMNDEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKA 115 Query: 67 AAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRL 122 A EMR R+ +G + + GTFH +A R+LR H DF I D D + Sbjct: 116 AREMRERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSI 175 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKDE-----GLRPHHIQ----------SYGNPV 166 +++++ + + D+K+ P A I++ K G+ + + Sbjct: 176 IRKIMVDVFMEDKKKADPALAKSRISAAKSAVDACVGMDGRRMARALCDTRPSLKRDPYI 235 Query: 167 EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN 226 + ++Y Y+ + +DF +LL A L YR+R+ ++LVDEFQDT+ Sbjct: 236 RDQFPRLYDEYEANLRSSNALDFDDLLSAAVALLRTSEEARLFYRQRWRHVLVDEFQDTS 295 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRS 285 QY IR LA +T +V +VGD DQ+IY WRGA+V NI+ +F +DF GA T+ L +NYRS Sbjct: 296 LSQYELIRALAAETARVFVVGDVDQAIYSWRGAEVANIRTKFDSDFAGAGTVLLTKNYRS 355 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T+ I+ AA A+I + R +L G+ +++ +E++EA F +G Sbjct: 356 TATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVVATEDEIEEADFAAREAARAARSGV 415 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 L + A+LYR+++QSR LEEA ++A +P+ + G F+ R+EIKD ++YLR++ N D Sbjct: 416 PLKDIAVLYRTHSQSRPLEEAFIRAGVPHVVVGDTAFYTRKEIKDLVAYLRVLFNSRDTV 475 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTS-------------------RDRQLTLWQACRELLQ 446 + +R++NTP R IG TL+ + + R Sbjct: 476 SLQRIINTPPRKIGPGTLEKLEAWAAGLPWVDGMPQPLGMALLDRTWSTPDQDDLLPPAA 535 Query: 447 EKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 + LA A A+ F+ ++ L + T+ V++ G E G R+ Sbjct: 536 DMGLAAGAYKAVSGFVSVMRELGEAVEVSDPGALTEEVVRRIGFEEYV--ADMENGDERV 593 Query: 507 ENLEELVTATRQFSYNE---------------------EDEDLMPLQAFLSHAAL--EAG 543 ++ELV+ S E + L FL +L A Sbjct: 594 GYVKELVSIASDPSAVESLDGVDGGGAAGGGDNGATKRKSTGHAGLGEFLEGISLLMSAE 653 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM--SLDEGGRLEEERRLAYV 601 D DAV+LMTLH+AKGLEF V I G E+ + P + + + +EE RL YV Sbjct: 654 TRSEDEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDASSDAAEHDEEVRLFYV 713 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 G+TRA +KL L A R+ +G+ VY PS F+ + E V Sbjct: 714 GLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLV 753 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 628 bits (1621), Expect = e-178, Method: Composition-based stats. Identities = 235/678 (34%), Positives = 348/678 (51%), Gaps = 52/678 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENC-SPYSIMA 59 MD+ +L+ LN QR AV +P S L VLA GSGKT+ L R+A+L+S ++ P ++ Sbjct: 1 MDIDPILNGLNAAQRTAVTSPSSILQVLAPPGSGKTKTLTARVAYLLSSKHAFRPQDVIC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFT KA+ EMR R+ L+G + +GTFH + R L A+ L + F I DS D Sbjct: 61 CTFTIKASREMRERLTHLIGDQVVSKLVLGTFHSICRRYLVAYGHLIGLKKGFGIADSND 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP---VEQTWQKVYQ 175 L ++KR++K +NL+ + P R I+SQK +G+ + +P +Q + +VY+ Sbjct: 121 GLAIIKRIVKRLNLNIQPNPAR---SRISSQKAQGISWQDLIDARHPKSVDQQEFVQVYR 177 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+ A + L+D+ +LLLR +L PH + + + +LVDEFQDTN IQY + L Sbjct: 178 EYEAALASSNLLDYDDLLLRCVDLLRQHPHCVSNVQT----VLVDEFQDTNVIQYELMNL 233 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 A ++ IVGD DQSIYG+R A+++N++R +P + LE NYRS+ +IL +A Sbjct: 234 FAAQNKRITIVGDPDQSIYGFRSAEIKNLERMQRRYPNTSVVLLEDNYRSSGSILGSAEQ 293 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL---AECAI 352 +IE + R KKL G L EA+++V IK G L ++ AI Sbjct: 294 VIEQDTARPVKKLHPTHGVGTMPVLRKLPTAAAEAQWMVMEIKRCITLTGQLLKSSDFAI 353 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 L RS A SR +E L + +PYR+ GG RFF+R EI+ L YLR+I++ ++ A R++N Sbjct: 354 LLRSAALSRQIESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVISHPENNDALARIIN 413 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDA 467 PTR IGD TL + + L LW +++ Q +K L+ A L + LI+A Sbjct: 414 VPTRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGLSKAANIGLSVLVGLIEA 473 Query: 468 LAQETAD----MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE 523 Q+ D V + VI G R + R N+EEL+ S + Sbjct: 474 SRQKLHDCIDESSPRVLLEFVISKLGFREYLTATYPLDEENRWANVEELLAQAGDSSTSY 533 Query: 524 EDED-----------------LMPLQAFLSHAALEAG--EGQADTWQDAVQLMTLHSAKG 564 +D L FL++ AL + D Q+ V + T+H+AKG Sbjct: 534 SQQDDILPEIEGLEQHQGHIGEEALSRFLANVALSTEVTTEEGDQPQEKVTISTIHAAKG 593 Query: 565 LEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE 624 LE+P VF+ + EG+ P + D +EERRL YV +TRA L L+ G+E Sbjct: 594 LEWPVVFVAAVYEGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSLPRRDSKNGEE 649 Query: 625 VYHRPSRFIGELPEECVE 642 R S F+ P VE Sbjct: 650 --TRTSSFL---PPSIVE 662 >UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=Sordariomycetes RepID=Q6MFN4_NEUCR Length = 1105 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 204/671 (30%), Positives = 328/671 (48%), Gaps = 53/671 (7%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LDSLN+ Q AV + + + +LAG GSGKT L R+ WL+ P ++ TFT Sbjct: 10 SILDSLNNAQARAVTSDAATVAILAGPGSGKTHTLTSRVVWLVDHVGYQPQDVVVATFTV 69 Query: 65 KAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RIG+ +G + + +GTFH +A R L A+ L + F I D D ++ Sbjct: 70 KAAREMKERIGKALGNGRENKIILGTFHSIARRYLAAYGRHIGLSEKFSIADDNDSRSII 129 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VYQA 176 R+ K + L P A +I+ +K +G+ P P +Q Q+ Y Sbjct: 130 TRICKRLQLG---LDPPMAKAWISKKKAKGMEPSPSSLPQPPKKQPVQRGQRDLEVCYTE 186 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ +R+ L+D+ +LL+R EL P + + + +L+DE+QDTN +QY +RLL Sbjct: 187 YQTHLERSNLLDYDDLLVRCVELLRKFPSCVSNIQT----VLIDEYQDTNGVQYELMRLL 242 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A ++ IVGD DQSIYGWR A+++N+ R L D+P + I LE+NYRS+ IL + + Sbjct: 243 AQKHQRITIVGDPDQSIYGWRSAEIKNLWRLLRDYPKTDEISLEENYRSSQAILDLSLLV 302 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL---AECAIL 353 I+ + R K L G L N EA ++V I+ G++ + A+L Sbjct: 303 IQQDKKRYQKVLKPVHDRGSRPVLRKLKNASTEAEWIVAEIRRALLMSGSMLTHNDVAVL 362 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 RS + SR +E AL +A +PYR+ GG +F+ER EIK L YLR+I +++ AF R++N Sbjct: 363 LRSASLSRHVESALGKAGIPYRMVGGFKFYERSEIKTILDYLRVIHQPDNNDAFGRIMNV 422 Query: 414 PTRGIGDRTLDVVRQTSRD----------RQLTLWQACRELLQEKALAGRAASALQRFME 463 P RGIGD T+ + + + + + + + + A + ++ Sbjct: 423 PKRGIGDGTIKNLIEEAEKSSLSLYSLLVKHCRGDRTAKTKITKHAEQKISGELIRMLNG 482 Query: 464 LIDALAQETADMP--LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + + + P L + ++ + + + + R N++E ++ F Sbjct: 483 IRKKMEEAAESNPFGLVDLIEHLLTALNFQNYLQVTYPDDHEQRWANVQEFISLANDFVR 542 Query: 522 N---------------EEDEDLMPLQAFLSHAALEAGEGQADTWQDA---VQLMTLHSAK 563 + E+ ++ L FL++ +L + + + Q+ V + T+H+AK Sbjct: 543 DLHVSGEDALPEIEGLEQSKEEEVLPQFLANVSLASDAQKGEEGQENKPLVTISTIHAAK 602 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+P VFI + G P S D +EERRL YV +TRA L L+Y G Sbjct: 603 GLEWPIVFIPAVYNGSIPHMRSEDG----DEERRLLYVAMTRAQSLLYLSYP-VYHSPGS 657 Query: 624 EVYHRPSRFIG 634 S F+ Sbjct: 658 SERTEMSSFVS 668 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 204/497 (41%), Positives = 284/497 (57%), Gaps = 10/497 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LLD LN +QR V +L+LAGAGSGKTRV+ HRIA+L+ +P SI+AVTF Sbjct: 1 MQQLLDKLNPQQRAGVENVDGPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQILDS 116 TNKAA EM R+ L+G S + TFH R+LR L + F I D Sbjct: 61 TNKAAKEMAERVDALIGHSTLAKPVLATFHSFCVRMLRRDIEALRIGNEGLTKTFAIYDE 120 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPVEQTWQKVYQ 175 DQ L+K++++ M LD+KQ PR + I+ K+ + P + +PV + +++ Sbjct: 121 SDQQSLVKQIMRRMGLDDKQLTPRVVLSKISWAKNHMIDPQEYYLQSSDPVAERVAHIFE 180 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 AY++ + +DF +LLL A L + + + Y R+ +L+DE+QDTN QY ++L Sbjct: 181 AYRKDLRKNNALDFDDLLLEAVRLLKSSAEVRERYNRRYQYLLIDEYQDTNRPQYELMKL 240 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LAG V +VGD+DQSIY WRGA + NI F DFP A+TIRLEQNYRST IL AA A Sbjct: 241 LAGSRHNVCVVGDEDQSIYSWRGADIRNILEFEKDFPNAQTIRLEQNYRSTQVILEAAGA 300 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAEC---AI 352 ++ N R GK LWT G I Y A + +EA F+ + I+ + G AE A+ Sbjct: 301 VVSRNEQRKGKSLWTSREGGSLIGFYEAPDGENEALFIADSIQKYLRKAGESAEQPRAAV 360 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+N+QSR++EEAL + + Y + GG F+ER EIKD LSYL+L+ N ND A +R+VN Sbjct: 361 LYRTNSQSRLVEEALRRYGIRYTMVGGFSFYERAEIKDLLSYLKLVQNPNDSIALQRIVN 420 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP RGIG T++ + + + + + W L+EK L RA AL F+ LI+ Sbjct: 421 TPARGIGKTTMETLERIALETGTSTWNGIVRALREKLLPSRALVALDTFVRLIEDARALL 480 Query: 473 ADMPLHVQTDRVIKDSG 489 A V +SG Sbjct: 481 APDFAEKLAADVAAESG 497 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 74/179 (41%), Positives = 96/179 (53%), Gaps = 8/179 (4%) Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 + L +I SG E+E + +RIENL+EL A + E Sbjct: 609 FRKPGDPATLPELIKFLIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQERGE--- 665 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L FL HAAL + Q D V LMTLH+AKGLEFP V + GMEEG+FP +L Sbjct: 666 --TLNEFLDHAALVSDTDQFD-ADARVTLMTLHAAKGLEFPMVVLAGMEEGLFPHSRTLT 722 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY--HRPSRFIGELPEECVEEV 644 + ++EEERRL YVG+TRAM L LT A RR YG ++ PSRF+ E+P +E + Sbjct: 723 DPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTPSRFLEEIPAHLLENL 781 Score = 72.9 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 26/72 (36%), Positives = 43/72 (59%) Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 T + + R+ P ++G + GQRVRH K+GEG + +G GE++++ V F G+K Sbjct: 872 TPAGKSARPRLDVPAPSGNTGLRNGQRVRHPKYGEGIVFQRDGEGENAKITVQFAKFGVK 931 Query: 709 WLVAAYARLESV 720 LV +A+LE + Sbjct: 932 KLVEKFAQLERL 943 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 627 bits (1618), Expect = e-178, Method: Composition-based stats. Identities = 205/669 (30%), Positives = 331/669 (49%), Gaps = 52/669 (7%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +L SLN+ QR AV + S + +LAG GSGKT L R+ WL+ P ++ TFT Sbjct: 7 DAILQSLNEAQRRAVTSTASTVAILAGPGSGKTHTLTSRVVWLIQRVGYRPSDVIVATFT 66 Query: 64 NKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 KAA EM+ RIG+ +G + + +GTFH +A R L + L F I D D + Sbjct: 67 VKAAREMKERIGKTLGEECEKKIVLGTFHSIARRYLSIYGNRIGLDSKFGIADDGDSRAI 126 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS----YGNPVEQTWQKVYQAYQ 178 ++R+ K + L+ P+QA +I+ +K +G P + G + Y+ YQ Sbjct: 127 IQRICKRLKLN---IEPQQAKSWISKEKAKG--PDAMAPPPTQKGRKENPELRTCYEEYQ 181 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 R+ L+D+ +LL++ EL + P + + + +L+DE+QDTN IQY ++L A Sbjct: 182 AQLTRSNLLDYDDLLVKCVELLRDHPACVSNVQT----VLIDEYQDTNGIQYELMKLFAQ 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 ++ IVGD DQSIYGWR A+V+N+ R L ++P + I LE+NYRS+ +IL + +I+ Sbjct: 238 AKQRITIVGDPDQSIYGWRSAEVKNLFRLLREYPNTDEISLEENYRSSQSILDVSLTVIQ 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG---ALAECAILYR 355 + R K L G L + E ++V+ IK G + AIL R Sbjct: 298 QDTKRYKKVLLPVHTKGARPVLRSLKSSSAEGEWIVSEIKRAVMMFGDMLKFEDVAILLR 357 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 S A SR +E AL +A + YR+ GG +F+ER+EIK + YLR+++ +++ A R++N P Sbjct: 358 SAALSRHIESALGKAGVAYRMIGGHKFYERKEIKVLIDYLRVVSQPDNNDALARIINVPR 417 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELL-----QEKALAGRAASALQ-RFMELIDALA 469 RGIG+ T+ + + + ++LW + + + + L + I +L Sbjct: 418 RGIGEATVKALIEEAEQSDMSLWTLILKHCRGNRKAKANIRPKMEQKLNTELIRTITSLQ 477 Query: 470 QETADMP------LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SY 521 ++ +++ L ++++ + E+E E+ + R N++E V F + Sbjct: 478 KQASEISQSSPVTLVNLIEQLLTHLDFKKYLEEEYTEEHEQRWANVQEFVNLVSDFMKDF 537 Query: 522 NEEDEDLMP-------------LQAFLSHAALEAGEGQADTWQDA---VQLMTLHSAKGL 565 DED +P L FL++ AL + + V + T+H+AKGL Sbjct: 538 GAPDEDALPEIDNLDQVKVDDMLGRFLANVALASDAQNKGDTTEQKSLVTISTIHAAKGL 597 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 E+P VF+ + G P S D +EERRL YV +TRA L L+ G Sbjct: 598 EWPVVFVPSVYTGSIPHSRSEDT----DEERRLLYVAMTRAKALLYLSCPL-YGSQGLSS 652 Query: 626 YHRPSRFIG 634 S F+ Sbjct: 653 KVELSPFVA 661 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 216/646 (33%), Positives = 341/646 (52%), Gaps = 30/646 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++Q++AV AP +LV+AGAGSGKTR L +R+A+L+ + +P I+ TFTNKAA E Sbjct: 8 LNEEQKKAVTAPLGPILVIAGAGSGKTRTLTYRVAYLIE-KGINPGRILLATFTNKAARE 66 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M +R+ +L+ T +W GTFH L H++LR H Q+F I+D ED ++LL I+ Sbjct: 67 MLNRVDRLVNTDTSQIWGGTFHHLCHKILRNHAKTIGFEQNFTIIDREDSIQLLTGCIEE 126 Query: 130 MNLDE--KQWPPRQAMWYINSQKDEGLRP-----HHIQSYGNPVEQTWQKVYQAYQEACD 182 +NL K +P +A+ + S ++P S+ K+ Y+E Sbjct: 127 LNLKRGNKLFPSPEALLEVFSLVVNKVKPIWKTLEESFSHLAIFSDEITKLEYFYRERKK 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + + D+ +LL +L+ K +IL+ Y+ F ILVDE+QDT+ IQ +I LL + + Sbjct: 187 KLLVFDYDDLLFYTVKLFQEKENILKFYQSYFEYILVDEYQDTSRIQADFIDLLGQSSQR 246 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 VM+VGDD QSIY WRGA++EN+ F +P I ++ NYRST IL+ ANA IE N Sbjct: 247 VMVVGDDAQSIYSWRGAEIENMLNFPKRYPSTVVINIKTNYRSTPEILALANAAIEGNQF 306 Query: 303 RLGKKLWTDGAD--GEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + K+L L ++ +++ + I+ ++ G E AILYR++ + Sbjct: 307 QFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDFRKQGIEAKEMAILYRAHFHA 366 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 ++ L + +P+ I G+RFFE+ IKD ++LR N D+ AF+R+V GIG Sbjct: 367 LEMQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFFINPYDETAFKRIVKMFN-GIGP 425 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +TL + + A +++ A + ++++ L+ Q Sbjct: 426 KTLSQLWAE--------YLASSGSIEKLRPPKAAEKSWMSWLDIHKELSSPGYAHQPSKQ 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +R++ G+ + + E Q R+E++EEL+ ++ E FL+ +L Sbjct: 478 LERILH--GVYADHLKMLYECYQRRLEDIEELINFASLYNSTE---------DFLAQISL 526 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 G + V+L T+H AKGLE+ VFI+ + EG+FPS SL+ LEEERRL Y Sbjct: 527 LTGVDTVQEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYSLNHPTLLEEERRLFY 586 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 V TRA +L L Y R ++ + PSRF+ ELP+ V + + Sbjct: 587 VAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHLVIKTKF 632 >UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7Y1_EUBE2 Length = 717 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 205/714 (28%), Positives = 364/714 (50%), Gaps = 37/714 (5%) Query: 11 NDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEM 70 +Q EA+ N+ V + GSGKT VL +RIA+L++ P SI+A+TFTNKAA++M Sbjct: 24 TKEQTEAITQTEGNIRVASVPGSGKTFVLTYRIAYLITELFVEPSSIVALTFTNKAASQM 83 Query: 71 RHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAM 130 +HR+ ++G + + GTFHG + L+ P+ F ILD + +L ++K + + M Sbjct: 84 KHRLRNIVGDN-ANCFTGTFHGYCNMFLKEEIHRLTFPKTFTILDKKAELEMIKDVAEDM 142 Query: 131 NLDEKQWPPRQAMWYINSQKDE--------GLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 + K ++ M I+ K + G+ ++ + + +KV+ Y + Sbjct: 143 GISLKDNTAKKIMSDIDITKQDMSYVELMAGVDKTELKRRASSEKNVDKKVFYNYLKRQC 202 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +L+ + + ++E+ +L DE+QD N Q + +L+G Sbjct: 203 DNYALDFEDLINFTLYILNRNEDVRIRWQEKCQYVLCDEYQDVNMKQDMLLHILSGLYQN 262 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQ+IY WRG+ E + F + L +N+RST I++AA +LI N Sbjct: 263 LFVVGDDDQNIYTWRGSDPEYMINFDKTHENLQDYSLTENFRSTPQIVNAAKSLISANQN 322 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RL K++ ++ DG A E E+ ++ + I ++ IL R+ +Q+R Sbjct: 323 RLEKQMISNRPDGNKPVFNAADTEEKESLWIADTILDNVAKNMKYSDHTILVRAASQTRS 382 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEEA ++ +PY+I G +F+E +EI+ LSY+R++ + D ++ P RG G ++ Sbjct: 383 LEEAFIKRKVPYKILSGAKFYESEEIRTVLSYMRMVYSLTD-MDLLYTISRPRRGFGKKS 441 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ ++ + +L++A + +++ + + +E +A+++ + TD Sbjct: 442 VEKLKNAAAQNNCSLFKALGKQIEDGDITQK------NVIEYYNAISELHDTYVTYTCTD 495 Query: 483 RVIK--DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 V K D G R EQ+ QTR++N+ EL+ + E++++ + L LSH AL Sbjct: 496 IVNKCLDMGYRKALEQDID---QTRLDNVSELIRTIT--ALEEDNQEKVELADLLSHFAL 550 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + + + D + V++MT+H+AKGLEF VF+ G+ EG FPS L EEERRL Y Sbjct: 551 FSAQDE-DGEYNVVKVMTIHTAKGLEFDTVFVPGLVEGQFPSSR-LRNEDEYEEERRLLY 608 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V +TRA L L+ R+ G+ RPS F+ ++ ++ + + R V+ Q + Sbjct: 609 VAMTRAKNMLYLS--TYRKKDGR-FAARPSAFLSDIDTNLLDCINNSRVLIRGVTEQMLP 665 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAA 713 + +++G +VRH FG G IV ++ ++ F+ G + L+ Sbjct: 666 KAV------FEVGDKVRHKVFGTGEIVKVDKVT--QTYEIQFENIRGTRRLMFR 711 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 216/668 (32%), Positives = 343/668 (51%), Gaps = 49/668 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL+ LN+ Q+ AV +P + + VLA GSGKT+ L R+A+ ++ E P++I+ TF Sbjct: 1 MEALLEGLNEAQKSAVTSPANVVQVLAPPGSGKTKTLTARVAYHINHERLQPWNIIVCTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 T KAA EM+ RI +G + + +GTFH +A R L + + + ++F I D+ D Sbjct: 61 TIKAAREMKERIKGFVGDKLEAKLILGTFHSVARRFLYRYGQEIGIDKNFGIADTSDSTS 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEA 180 +LKR+I P A I+ K +G+ ++ N E + VY +YQE Sbjct: 121 ILKRIITRYQY---TVEPGHARSRISKLKAKGITADDNTRTAKNVNENEFAMVYSSYQEH 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + L+D+ +LL+R +L P + + +L+DE+QDTNNIQY + LLA T Sbjct: 178 LAASNLLDYDDLLMRCVDLLKKSPSCVSTIQA----VLIDEYQDTNNIQYELMSLLAQKT 233 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ IVGD DQSIY +R A+++N+ R D+P + I LE NYRS+ ILS+A A+IE + Sbjct: 234 KRITIVGDPDQSIYSFRSAEIKNLLRMRTDYPESVVINLENNYRSSGCILSSAMAVIEQD 293 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI---KTWQDNGGALAECAILYRSN 357 R K L GE +L + EAR++V I KT + + AIL RS+ Sbjct: 294 ESRPQKALVATHGIGEQPTLRHLISANVEARWIVEEIHRTKTLTAGLLSFNDYAILVRSS 353 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 + +E AL QA +PYR+ G +FF+R EIK L YLR+I+ + + A RV+N P+R Sbjct: 354 PLTLQIERALGQAGIPYRMVAGTKFFDRAEIKIILDYLRVISQPDHNDAVARVINVPSRK 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEK-----ALAGRAASALQRFMELI-----DA 467 +GD T+ + + + R++TLW+ ++ Q + ++ +A + +F+ +I Sbjct: 414 VGDVTVKALLEEAEVRKVTLWKLVLDVAQGRRKPQCKVSAQANIGISQFVNVILTSREKL 473 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS------- 520 L ++ + L V+ ++ +Q E Q R N+EEL+ Q + Sbjct: 474 LPAKSDECDLFGLIMHVLNKIAFQSYLKQAHKENWQDRWANVEELINQATQMATAVANGE 533 Query: 521 -------------YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEF 567 D L FL++ L + Q + D V + T+H+AKGLE+ Sbjct: 534 EISDDALPEVEGLEQRSDTAADLLSKFLANVTLSSAADQDGSELDQVTISTIHAAKGLEW 593 Query: 568 PQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 P VF+ + +G P + D+ +EERRL YVG+TRA L L+ + + Sbjct: 594 PVVFMPAVYDGSIPHSRAEDQ----DEERRLLYVGMTRAQGLLYLSCPVKQSGQEQTTL- 648 Query: 628 RPSRFIGE 635 SRFI + Sbjct: 649 --SRFISD 654 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 235/759 (30%), Positives = 377/759 (49%), Gaps = 58/759 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L SLN +Q + V + + V+AGAG+GKT+VL RIA+L+ Y I+A+ Sbjct: 1 MIMQDYLKSLNKQQYDVVTSDLIPIFVVAGAGTGKTKVLTSRIAYLIEHFKIPEYKILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQD-FQILDSEDQ 119 TFTNKAA EM+HR+ +L+ + + TFHG ++LR + + D F ILD DQ Sbjct: 61 TFTNKAAKEMQHRLEKLLNKEKTQVSFRTFHGFCAQVLREEVNNVDRLNDRFNILDEVDQ 120 Query: 120 LRLLKRLIKAMNLDEK-----QWPPRQAMWYINSQKDEGLR-----PHHIQSYGNPVE-- 167 +L++ L+K+ + + + M IN K L + G Sbjct: 121 AKLIEDLLKSQKYEYYYSQYTDFKKNKVMSIINDAKTYNLDVAEFLASDLNKLGEDHILT 180 Query: 168 ----QTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQ 223 Q Y Y++A +DF +LL A+ L+LN P IL+ ++ R+ ILVDEFQ Sbjct: 181 PNLVQPLSNFYHDYEKALKELNAIDFNDLLNIAYNLFLNDPIILKKWQNRYEAILVDEFQ 240 Query: 224 DTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNY 283 D N IQY ++LL + VGD DQSIYGWRGA E DF L QNY Sbjct: 241 DANEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGANSEIGDSIRFDFNDLVVKYLTQNY 300 Query: 284 RSTSNILSAANALIENNNGRLGKKLWTD--GADGEPISLYCAFNELDEARFVVNRIKTWQ 341 RS +IL+ AN I+ NN R K L + G N + RFV+++IK Sbjct: 301 RSKQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPIWINFSNIEYQNRFVMDKIKELV 360 Query: 342 DNG-GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 + + AILYR+N S LE + + +PY I+GG +FF R+EIKD + YL+L+ + Sbjct: 361 ASKQYTYGDFAILYRTNFSSVSLERLIKENRIPYEIFGGYKFFLRKEIKDLIGYLKLV-D 419 Query: 401 RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 N+D AF+R++NTP R IGD +++++++ + + +T ++A + L E + + Q Sbjct: 420 TNNDIAFDRIINTPRRMIGDTSIEIIKELANKKSITEYEAL-DYLDESNIKANVKKSAQN 478 Query: 461 FMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 F ++I+ L + ++ + +IK + T+ +++ E + ++ Sbjct: 479 FKKMIEDLRANQGNWSVYQTINEIIKRINYYDYLNE------PTKHDSVNEFIDFLNKYE 532 Query: 521 YNEEDE--DLMPLQAFLSHAALEAGEG--QADTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 E++ + + F+ + ALE Q + ++A++LMT+HSAKGLEF VF++ M Sbjct: 533 KEYENDFGTKLTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVINMN 592 Query: 577 EGMFPSQMSL---DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 E + PS S+ + +L EERR+ YV TRA L L + KE Y +PSRF+ Sbjct: 593 ENILPSSRSIAATNNKAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKEPY-QPSRFL 651 Query: 634 GELPEECVEEVRLRATVS----------------RPVSHQRMGTPMVENDSGYKLGQRVR 677 EL + +++ T + S E + Y +G+ + Sbjct: 652 YELSDLVLDKQDQAKTYFDKHNFLTDDDGWFNSKKSPSKLDAWNSTNEVEHNYFVGEIIY 711 Query: 678 HAKFGEGTIVNMEGSGEHSRLQVAFQGQ--GIKWLVAAY 714 H +GEG + + + ++V+F+ + G K L+ + Sbjct: 712 HQLYGEGIVREI----DDLTIKVSFKDKKAGTKDLIKNH 746 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 226/707 (31%), Positives = 341/707 (48%), Gaps = 87/707 (12%) Query: 1 MDVSYLLDSLNDKQRE-------------------AVAA-PRSNLLVLAGAGSGKTRVLV 40 M+V++ L+SLND Q AV P + L +LAG GSGKT+VL Sbjct: 1 MEVNF-LNSLNDAQLRGQTRPSISVIILLTRTTLVAVKYWPETPLQILAGPGSGKTKVLT 59 Query: 41 HRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLR 99 RIA L+ + P+SI AVTFTNKAA EMR R+ +L+G + + +GTFH L R LR Sbjct: 60 SRIAHLILNHHLPPFSICAVTFTNKAANEMRERLTKLIGKERTSQLRMGTFHALCARFLR 119 Query: 100 AHHMDANLPQDFQILDSEDQLRLLKRLIK-------AMNLDEKQWPPRQAMWYINSQKD- 151 + L ++F + D+E+ ++++ L+K + NLD P + + I+ K Sbjct: 120 KYAHLVKLAENFTVCDAEESKKIIQALLKPYTAYLASENLD---LQPGRVVSSISKAKSK 176 Query: 152 ---------------------EGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFA 190 GL +++ +++ Y++ R +DF Sbjct: 177 EQSGSVFLEEVIKAERRIRQRNGLPLGDDVEEKKTIDRIIGEIFLEYEKTLKRNNALDFD 236 Query: 191 ELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDD 250 +LL +L+ + R +ILVDEFQDTN QY +R LA V IVGD D Sbjct: 237 DLLTYGVKLFTKNDETVIWCR----HILVDEFQDTNITQYKLMRALAIA-RCVTIVGDPD 291 Query: 251 QSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWT 310 QSIYGWR A+V N+ + DFP E + LE+NYRST+ IL A+ A+I + R+ K L T Sbjct: 292 QSIYGWRSAEVGNLSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHT 351 Query: 311 DGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGA--LAECAILYRSNAQSRVLEEAL 367 +G LY E +EA F+ +K + GGA + IL R NA SRV+E AL Sbjct: 352 SHPNGFTPVLYQVQTEHEEAAFIAIEMKRLVAHMGGALNWGDFVILLRFNALSRVIETAL 411 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 + +P R+ GG +FFER E+KD L+YL+++ N N AF+R VN P RGIG++T+ + Sbjct: 412 QKEGIPSRVLGGHKFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVPGRGIGEKTVAELI 471 Query: 428 QTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQETAD-MPLHVQTDRV 484 + + + KA + + F+ I +L + + ++ Sbjct: 472 GRAEKSNQSPLAIVEAICDNKAPDIKPAVKRKVAPFVTAIRSLRAQAHNSSSPADLVRKL 531 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL---------------M 529 + ++ + + ++R EN++EL+T + + E+ Sbjct: 532 VDLIKYEDHLKKTQSD-WESRWENVKELITFASEMEAQNQAEEAADAVAGGDNSIEMSTT 590 Query: 530 PLQAFLSHAALEAGEGQ--ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 PL+ FL + L + + +D V + T HSAKGLE+P V I +++ FP S D Sbjct: 591 PLRQFLQASMLSSEGDNQSEEGNKDKVTISTCHSAKGLEWPVVMIPSVDQNTFPFYRSED 650 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG 634 EERRL YV TRA L ++ A TR + G+ S FI Sbjct: 651 TA----EERRLLYVACTRAQSLLYVSRATTRMVAGETKSKELSEFIS 693 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 619 bits (1596), Expect = e-175, Method: Composition-based stats. Identities = 220/672 (32%), Positives = 334/672 (49%), Gaps = 41/672 (6%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++Q AV AP LV+AGAGSGKTR L R+ +L+ + I+ +TFTNKAA E Sbjct: 24 LNEQQHAAVTAPPGPSLVIAGAGSGKTRTLTFRVGFLLE-QGIPADRILLLTFTNKAARE 82 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+ L+G +W GTFH + +R+LR H +DF I+D ED L+ + Sbjct: 83 MMRRVSDLLGQDLPSLWGGTFHSIGNRILRQHAPLLGYQRDFSIMDREDAKDLVDACVAE 142 Query: 130 MNLDEK--QWPPRQAMWYI-----NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +D K ++P + I N+Q+ Y + + + Y Sbjct: 143 AEIDVKATRFPKADVLADIFSLGLNTQRSIPEVLAQEYDYFENLAPQIADIKERYILRKK 202 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL +L P + +HY+ RF ILVDE+QDTN +Q I LLA Sbjct: 203 STNAMDFDDLLELWLKLLKEHPEVREHYQRRFQFILVDEYQDTNALQSELIDLLAARHHN 262 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 VM+VGDD QSIY WRGA +NI +F + A ++E NYRST IL+ ANA I N Sbjct: 263 VMVVGDDAQSIYAWRGANFQNIIKFPERYSEARVYKIETNYRSTPEILNLANAAISANVK 322 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 + K+L G L ++A FV R+ ++ G + + A+LYRS+ + Sbjct: 323 QFEKQLTPARKSGLKPVLVPCMTASEQASFVAQRMLELREEGVNMNQMAVLYRSHFHALE 382 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 L+ L + ++P+ I G+RFFE+ IKD +Y++L+ N D+ AF+R+V G+G + Sbjct: 383 LQLELTRRNIPFSITSGIRFFEQAHIKDVAAYIKLVNNPRDELAFKRLVQLLP-GVGGKG 441 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKAL------------------------AGRAASAL 458 D + + + + + ++ L + A A Sbjct: 442 ADKLWARFQSAFKVIPENLQADARDTLLPSETSTKADRNPVATALQASASAVPKKTAVAW 501 Query: 459 QRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 +F+ I L E R+I ++G ++ + R++++E+L +Q Sbjct: 502 AQFVATISQLETEPVRGKTDKMI-RLIVEAGYDEHLQENYA-NYRNRLDDIEQLALFAQQ 559 Query: 519 FSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEG 578 FS EE + A LS+ E E A+ + V+L T+H AKGLEF VFI+ + +G Sbjct: 560 FSTTEE---FLAQLALLSNLEAETDEP-ANNDNEQVKLSTIHQAKGLEFDVVFIIMLCDG 615 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG--KEVYHRPSRFIGEL 636 +FPS SLD EEERRL YV +TRA +L L+Y R + G + +PSRF+ EL Sbjct: 616 LFPSARSLDTAEGEEEERRLLYVAITRARNELYLSYPLIRMMPGGSGDAMQQPSRFLSEL 675 Query: 637 PEECVEEVRLRA 648 P+E ++E L+ Sbjct: 676 PKESLDEWNLKT 687 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 618 bits (1594), Expect = e-175, Method: Composition-based stats. Identities = 215/696 (30%), Positives = 329/696 (47%), Gaps = 71/696 (10%) Query: 6 LLDSLNDKQREAVAAP-RSNLLVLAGAGSGKTRVLVHRIAWLM----SVENCSPYSIMAV 60 +L L+D QR AV + L +LAG GSGKTRVL R+AWL+ + P + V Sbjct: 2 MLSGLSDAQRTAVTSDASRPLQILAGPGSGKTRVLTTRVAWLVQGAPDRKPIPPSQCVVV 61 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWV-GTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAAAEMR R+ L+G + M + GTFH R LR L + F I D++D Sbjct: 62 TFTNKAAAEMRSRLQALIGEERTRMLILGTFHATCARFLRRWGERIGLSRQFTIADADDA 121 Query: 120 LRLLKRLIKAMNLD----EKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT------ 169 R++K + + D + + P A+ I+ K + +S T Sbjct: 122 KRIIKDICADFDADMASDDVRVKPETAIAAISRAKSRCMNAVQWRSMSKYPPGTAMHEEH 181 Query: 170 --WQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNN 227 ++Y Y+ +DF +LL+ +L+ P + + ++LVDEFQDTN Sbjct: 182 TYVCRIYAEYESRLASHNALDFDDLLMYGVKLFREHPFLSL---DHIEHVLVDEFQDTNA 238 Query: 228 IQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 +QY + ++ V IVGD DQSIY WR A V +++R DFPG + + LEQN+RST Sbjct: 239 VQYELMCHMSAGNKCVSIVGDPDQSIYSWRHADVSHLERMRTDFPGVQRVLLEQNFRSTP 298 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-- 345 +IL AA ++++ + R+ K L+T A G P+ L + +EAR++ I G Sbjct: 299 SILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRAFHDADEEARYIALEILRHVQCTGGL 358 Query: 346 -ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDD 404 A+ +IL R NAQSR LE AL + +PYRI GG+RFF+R EIKD L+YL + N Sbjct: 359 LTFADISILLRFNAQSRPLEAALQRHGIPYRILGGLRFFDRAEIKDLLAYLVVTENPAYT 418 Query: 405 AAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACREL--LQEKALAGRAASALQRFM 462 R++N P RGIG +++ + ++ Q+ L + + ++ +F+ Sbjct: 419 PGVLRILNVPKRGIGTKSVQALLAAAQAEQVPLLTYLERVSPAAAYGMRPAVVKSVSQFV 478 Query: 463 ELIDALAQETAD-MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS- 520 + I L + + V+K + + +R EN++ELV+ Sbjct: 479 QTIQELRNAAENGSSVADLLHLVLKLTRYEEHLRPD--PDFDSRWENVQELVSFASSIDL 536 Query: 521 ---------------------------------------YNEEDEDLMPLQAFLSHAALE 541 + +E+ PL AFL +AL Sbjct: 537 PPQSPPSHHGEPVRKRARVSENRPEDANEFSVHNIVDNVHADEEVATTPLSAFLESSALA 596 Query: 542 AGEGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + G + A V + T H+AKGLE+P VF+ E+G++P S R EE R L Y Sbjct: 597 SDLGVQEGSPPAMVTISTCHAAKGLEWPVVFLPASEDGIYPFYRSTTPEERREERR-LYY 655 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 V +TRA L L+++ R + + + S F+ L Sbjct: 656 VAMTRAQTNLILSWSHRRLVMSEWSSRQLSPFLAPL 691 >UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria RepID=Q1NRJ1_9DELT Length = 775 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 233/760 (30%), Positives = 351/760 (46%), Gaps = 67/760 (8%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 + LN QREAV AP +LV+AGAGSGKTR LVHR+AWL+ + P ++ +TFT KAA Sbjct: 32 EQLNSAQREAVCAPPGPILVIAGAGSGKTRTLVHRLAWLVE-QGTPPEQLLLLTFTRKAA 90 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM R G L+ S + GTFH A+ LLR + +F I+D D ++ L Sbjct: 91 QEMTARAGWLLDGSCRRVTGGTFHATANLLLRRYATRIGYQANFSIIDQSDAEGIINLLK 150 Query: 128 KAMNLDE--KQWPPRQAMWYI-NSQKD------EGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 ++ L +++P R+ + I + + + + H + ++ + Q YQ Sbjct: 151 SSLGLGGAGRRFPSRRLILGILSKAVNVGSSVSDLVEAEH-EHLAEFLDDILA-INQHYQ 208 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + GL+D+ +LLL L + + + +RF ILVDE+QDTN IQ +RLLA Sbjct: 209 QFKLDHGLMDYDDLLLNWRRLLRDDREVREELAQRFQAILVDEYQDTNPIQAEIVRLLAA 268 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 VM VGDD QSIY +RGA NI F + FPG +RLE+NYRS IL NA+I Sbjct: 269 QRRNVMAVGDDAQSIYSFRGADFRNIMEFPDHFPGTRVVRLEENYRSIPQILEVGNAIIA 328 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 + KKL++ G + A NE ++ARFVV +IK + ++ A+L+RS Sbjct: 329 PAPVKYPKKLFSRLEGGSRPLFHAARNESEQARFVVEKIKELRRE-LDASQIAVLFRSGF 387 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 S LE L + + GG++ E IKD L++ R++ N D ++ R++ + I Sbjct: 388 HSYKLELELTANGIDFEKRGGLKLTESAHIKDVLAHFRVLCNPADRLSWHRLLLLLDK-I 446 Query: 419 GDRTLDVVRQ-TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--- 474 G +T + Q+ + L A +A A + + E + L Q AD Sbjct: 447 GPKTAARIIDRLPLLEQVAGPGDGQRPLDGSLAALKAFPAGKAWGEGMQKLLQLLADIND 506 Query: 475 --MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + ++V+ + + + + R +LE+L + + Sbjct: 507 PGLAPAELLEQVL--IYYQPLLRRLYPDDYPRRQRDLEQLRPLLAGYESMD--------- 555 Query: 533 AFLSHAALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 FL+ AL+ + D + L T+HSAKGLE+ VF++ + EG FP+ ++ + Sbjct: 556 DFLAELALDPSSPEVDDDGGGRLVLSTVHSAKGLEWEAVFVIHLAEGKFPANQAVG-AAQ 614 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECV--------- 641 EEERRL YV TRA + L L Y + ++ PS F+ LP E + Sbjct: 615 YEEERRLLYVAATRAKRWLYLVYPRQSTGADRRPLFCEPSPFLAPLPPELLRGSGSGGEA 674 Query: 642 ---------------------EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAK 680 E R+ + + M + +G RVRH Sbjct: 675 AGRPDWPSAPPAGDDPWELAAENSRVGPGPPAGLPGSGQRSAMAGESAALTVGSRVRHPF 734 Query: 681 FGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 FG G IV G G ++V F G K L YARL SV Sbjct: 735 FGPGVIVKQRGGG---IVEVNFDRHGRKTLHLDYARLVSV 771 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 222/732 (30%), Positives = 389/732 (53%), Gaps = 37/732 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L LN KQ +AV + + ++AGAG+GKT+ L RIA+L+ N + I+A+ Sbjct: 1 MFSDEYLKQLNSKQYQAVTSKDKAVYLVAGAGTGKTKTLTIRIAYLIKYLNINNEKILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN--LPQDFQILDSED 118 TFTNKAA+EM+ R+ + + TFH L +R+L+ N ++ ILD +D Sbjct: 61 TFTNKAASEMKERLVAM-KVDIYKSTICTFHSLGNRILKKFIHVLNNNFDSNYSILDIKD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 L+++K++ K +N+D++++ P++ YI++ K++ + I +Y N K+Y YQ Sbjct: 120 SLKIIKKISKDLNIDKEKYKPKELNKYISNIKNKKEKKIFIDNYDN----NILKIYNNYQ 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + L+DF +L++ ++L +I +++ +FT+IL+DEFQDT+ +QY ++LL Sbjct: 176 QFLENNNLLDFDDLIIYTYKLLKKHENIKNYFQNKFTHILIDEFQDTDFLQYQILKLLNT 235 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGD DQSIY +RGA++ N + FL DF A+T+ L++NYRST+NIL AN LI+ Sbjct: 236 KNNYIFAVGDPDQSIYSFRGAEITNNKLFLKDFK-AKTLILDENYRSTNNILDKANLLIQ 294 Query: 299 NNNG-RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRS 356 NN+ KKL + G + N+ E FV +IK + + AILYR Sbjct: 295 NNSFYGFTKKLQSFFGKGHKVFPKMFENDDQEVDFVAEKIKNLIKKEKCNYEDIAILYRL 354 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N + E+ L+ ++PY ++G + FF R+EIKD L+Y++++ + D +R++N P+R Sbjct: 355 NGLEKKFEKIFLKKNIPYIVFGNINFFNRKEIKDILAYIKILIDPKQDFYLKRIINVPSR 414 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET---A 473 IG +T+ + S+++ ++L++ L +E+ + L F LI + ++ + Sbjct: 415 KIGKKTISNLEIISKEKNISLFETLILLCKEE---KKCNKNLLNFKNLILEMIKKINSNS 471 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTAT-RQFSYNEEDEDLMPLQ 532 + L D + + ++K + +E+L + ++ +++ L Sbjct: 472 FLKLENIIDYIDQKVNYSKSINKKKINPENDNLTYIEDLKSFFTKKKDQDKKKTVKQELI 531 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 L +L + + ++ V L T+H KGLEF VF+V EE + P + + L Sbjct: 532 DILDQISLNNEVKKDN--KNKVTLSTIHKIKGLEFKIVFVVYFEENILPLKNNKYNAP-L 588 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATVS 651 EEERR+AYV +TRA ++L L A R ++G K + + S F + + + Sbjct: 589 EEERRIAYVAITRAKERLFLLGAYERNIFGHKTINIKESDFFENM----------KIFLP 638 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 R S N + +K+G +++H FG G I+ + E++ L +AF+ GIK + Sbjct: 639 RKKSISESKYQFNNNYNFFKIGDKIKHDIFGIGRIIT---NIENNLLIIAFEPQFGIKKI 695 Query: 711 VAAYAR--LESV 720 YA+ L+ + Sbjct: 696 AYDYAKINLKKI 707 >UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=3 Tax=Trichocomaceae RepID=C8V6U5_EMENI Length = 997 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 221/684 (32%), Positives = 339/684 (49%), Gaps = 59/684 (8%) Query: 1 MD-VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD + +LD LN QR AV + L VLA GSGKT+ L R+A+L++ + P ++ Sbjct: 1 MDPLDPILDGLNSAQRTAVTSSAPILQVLAPPGSGKTKTLTSRVAYLLAHDGYRPQDVIC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFT KA+ EMR R+ +L+G Q + +GTFH + R L + L + F I DS D Sbjct: 61 CTFTIKASREMRERLAKLVGDHVQSRLILGTFHSICRRYLVRYGHLIGLQKGFGIADSGD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKV 173 L +++R++K + L P A I+ QK G+ P + + N + + + +V Sbjct: 121 SLAIIRRIVKRLQLG---IQPNTARARISHQKAHGVSPDDVAAKQNKISKLLEHREFVQV 177 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+ Y+ + L+D+ +LLLR EL P + + + +LVDEFQDTN IQY + Sbjct: 178 YREYESELATSNLLDYDDLLLRCAELLRKHPKCVSNVQ----VVLVDEFQDTNQIQYDLM 233 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 LLA ++ +VGD DQSIYG+R A++EN++R + E + LE NYRS+ +IL +A Sbjct: 234 NLLASWNRRITVVGDPDQSIYGFRSAEIENLKRMQRLYRNTEVVLLEDNYRSSGSILKSA 293 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT---WQDNGGALAEC 350 +IE + R KKL G L + DEA+++V IK ++ Sbjct: 294 QDVIEQDLSRPAKKLQPTHTFGTLPVLRKLPSAEDEAQWLVLEIKRCIVLTGKLLKYSDF 353 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AIL RS + SR +E A+ + +PYR+ GG RFF+R E+K L YLR+I++ + A R+ Sbjct: 354 AILLRSASLSRQIESAMGKHGVPYRMVGGQRFFDRVEVKLLLDYLRVISHPENSEALLRI 413 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELI 465 +N P+R IG+ T+ ++ + LW +++ Q EKA++ L + LI Sbjct: 414 INVPSRKIGEETVKMLLNGAEKAGKPLWDYIKDVAQGRRSTEKAMSKPTNQGLSSLVGLI 473 Query: 466 DA----LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + L Q + V+K R G + R N+EEL++ + Sbjct: 474 EYSREKLRQCVDRSAPRRLLEIVMKRLSFREFITATYGSNDENRWANVEELMSQADDATA 533 Query: 522 NEEDE------------------DLMPLQAFLSHAALEA------GEGQADTWQDAVQLM 557 +E E L FL++ AL D Q+ V + Sbjct: 534 ADESEQDENLPEIAGLTQQESHPGEEALSRFLANVALSTEVQPKEETEGEDQAQEKVTIS 593 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAET 617 T+H+AKGLE+P VFI EG+ P + D +EERRL YV +TRA L L+Y Sbjct: 594 TIHAAKGLEWPVVFIPAAYEGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSYPL- 648 Query: 618 RRLYGKEVYHRPSRFIGELPEECV 641 R+ + S F+ P+E + Sbjct: 649 RQARENAETNVTS-FL---PQELI 668 >UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificaceae RepID=O66983_AQUAE Length = 669 Score = 612 bits (1578), Expect = e-173, Method: Composition-based stats. Identities = 219/715 (30%), Positives = 364/715 (50%), Gaps = 57/715 (7%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q EAV S LLV+AGAGSGKT+ L H++ +L+ + PY I+ +TFTNKAA Sbjct: 2 KLNTQQEEAVRHFGSPLLVVAGAGSGKTKTLTHKVEYLIKEKGLKPYEILCITFTNKAAK 61 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 E++ RI G W GTFH +A ++L+ +P+DF I D +D ++K ++K Sbjct: 62 EIKERIKNTFGLELE--WSGTFHSVALKILKKDGEKIGIPKDFSIADEKDTTLIVKEILK 119 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 L + P + I+ K+ P E + + YQ L+D Sbjct: 120 KYGL---KKEPEEVKEKISKVKENFEEP----------EAWLGVLLEEYQRVLRENKLLD 166 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F++L+ + L L + + YR F I+VDE+QDTNNIQY ++LLA + +GD Sbjct: 167 FSDLMRELYNLLLVD-EVREKYRNTFKYIMVDEYQDTNNIQYEILKLLA--NKNICAIGD 223 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG--- 305 +Q IY WR A+ +NI RF+ DF + I+LE NYRS IL ANA++E + Sbjct: 224 PNQCIYEWRDARPDNILRFIEDF-NPKIIKLELNYRSREPILRVANAVLEASTLEWKDLI 282 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 KL +G+ + +E +EA ++ +IK L + A+L R + V E Sbjct: 283 PKLRGVRGEGQKPYVRRFQDEEEEALWISRKIKELAGE-YELKDIAVLVRVGYITDVFER 341 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 +A +PY++ G ++F+ER EIK+ ++ LRLI N +D+ AF+R+ +G GD++ +V Sbjct: 342 TFFKAGIPYKVVGTIKFYERIEIKNLIALLRLIYNPSDEVAFKRLTEFFVKGFGDKSFEV 401 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 V++ + ++A +E L K L AA + F++ + L + H + + Sbjct: 402 VKKNFKGN---WFKALKESL--KKLPKNAAISAYEFLKAVVPLYKNPEKY--HEGLEAFV 454 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 + + +++ + + RIEN++E +++ + F L+ L+ L + Sbjct: 455 EKIDYYELLKEKFKKDYEERIENVKEFLSSLKDF-----YAKAYTLEDLLAEITLTS--- 506 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 + + ++AV+++T+HSAKGLEFP VF+ +EEG+ P S + LEEERRL YV +TR Sbjct: 507 EEEEEENAVKILTIHSAKGLEFPVVFLPRLEEGILPHHRSQESERELEEERRLFYVAITR 566 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVE 665 A L ++Y K+ +PSRF+ ++P+ ++ + Sbjct: 567 AKDLLFMSYT-------KKENRKPSRFLSDIPKHLLDLSAFKKKKKVAYEENLRP----- 614 Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + K G +V H FG+G ++ +E R +V F+ K + ++ LE + Sbjct: 615 -NRLIKKGDKVIHRVFGKGVVLRIEEE----RAKVRFENGEEKVIHTSF--LEPL 662 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 607 bits (1566), Expect = e-172, Method: Composition-based stats. Identities = 226/741 (30%), Positives = 371/741 (50%), Gaps = 37/741 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M LL LN Q++AV L ++AGAG+GKT+VL ++++L+ VE +P+ I+AV Sbjct: 15 MIEHKLLADLNIAQKQAVLVMPKTLQIVAGAGTGKTKVLTRKMSYLIEVEQVNPFKILAV 74 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R + + + + TF+ L + +L+ + F ILD +D Sbjct: 75 TFTNKAAKEMRERASAHINENTKNLQIYTFYNLCNLILKEDIHHLGYSKTFSILDVKDID 134 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQK-DEGLRPHHIQSYGNPVEQTWQK---VYQA 176 +L L +LD R Y +K + + I E +K VYQ+ Sbjct: 135 NILSLLYAKHDLDNLDLAYRTMRAYFKKRKLSDFVTNWEIFDRKEIDEDIMEKMDLVYQS 194 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E VDF +LLL + L+ P + + + +F +LVDEFQDT+ +QY ++++ Sbjct: 195 YIEYTKENNFVDFEDLLLLVNHLFETNPKVRKKWESKFEYVLVDEFQDTSPLQYEILKVI 254 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + IVGD DQ+I+ W GA + F DFP + I+LEQNYRST IL AAN L Sbjct: 255 A-KNAYLTIVGDPDQTIFWWHGADINIFLNFEKDFPESMKIKLEQNYRSTKKILDAANKL 313 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I N RL K L+T+ +GE I AFN EAR+VV +I + L ILYRS Sbjct: 314 IAKNKRRLTKNLFTEKEEGEAIEFNHAFNIDAEARWVVTKINMLKKQKVQLKNIVILYRS 373 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + SR LE+ L++ ++ ++I G +FFE++EIK+ + +L+ I + N AF + R Sbjct: 374 SHVSRALEQQLVKENINHQIVNGTKFFEKKEIKNLIYFLKTIYSAN-TLAFYNTLLFFVR 432 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQAC--RELLQEKALAGRAASA----LQRFMELIDALAQ 470 + + LD V + +L+L++ R + L+ + L+ ++ L Sbjct: 433 SLAKKDLDEVLHQAAAAKLSLYKYIITRIKTENLGLSAKTRKETISLLKTIVKFKKLLKN 492 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 E + D +K+ + ++ ++ + +N+ E +T +++ +E+ Sbjct: 493 EKHEANYSWIFDAFLKEVKFYDLINYDRDDENAIQ-DNVYEFLTLLQKW---QEENPSSE 548 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG- 589 L F AL + + + LMT+H+AKGLEF VFI+G+ E + PS +L Sbjct: 549 LSKFFEDIALYSNRIDESAGNNFISLMTIHNAKGLEFDYVFIIGLNENILPSAKALYSKD 608 Query: 590 -----GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP---EECV 641 +LEEERR+AYV +TRA K+ ++ A Y KE + SRF+ E+ E+ V Sbjct: 609 GSINYDKLEEERRIAYVALTRAKTKVFISDARGIDPYSKE-PKKTSRFLTEMGISLEDHV 667 Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 +E+ +++ + +G + H+ FGEG ++ ++ + S + V Sbjct: 668 QEINSITNITQEIQ---------SGHHSLIVGDFISHSSFGEGELLEIQDNDFESSIVVR 718 Query: 702 FQGQ--GIKWLVAAYARLESV 720 F+ + GI+ + + + + Sbjct: 719 FKNKVVGIRTISKTHESIRRI 739 >UniRef50_Q2LTE2 UvrD/rep helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTE2_SYNAS Length = 657 Score = 605 bits (1561), Expect = e-171, Method: Composition-based stats. Identities = 226/645 (35%), Positives = 317/645 (49%), Gaps = 29/645 (4%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN++Q V +LVLAGAGSGKTR L +R+A L+ P I+ TFTNKAA Sbjct: 6 KELNEEQCHVVLEAGGPMLVLAGAGSGKTRTLTYRVARLVET-GIKPERILLATFTNKAA 64 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 M +R+ +L+ + GTFH H +LRAH + F ILD+ED +L+ + Sbjct: 65 RSMLNRVRELVPVDLSRLSGGTFHHNGHFMLRAHAERLGYTRSFSILDTEDARQLISTCV 124 Query: 128 KAMNLDEK--QWPPRQAMWYI-----NSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +D K +P ++ I N+ D + + + +KV Y Sbjct: 125 VEAGIDTKGATFPKANVLYGILSLAVNTAADLSTTVAERYPFFSHRLEDIRKVAALYDLR 184 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 ++ +DF +LLL L L P +LQHY ERF +ILVDE+QDTN IQ + LLA Sbjct: 185 KRQSDFMDFDDLLLNWRRLLLECPDVLQHYAERFEHILVDEYQDTNRIQAEIMDLLASRH 244 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 +M+VGDD QSIY +RGA NI F +P +LE NYRST IL AN IENN Sbjct: 245 RNIMVVGDDSQSIYAFRGANFANIMSFPEKYPDCRIFKLETNYRSTPEILHLANLSIENN 304 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + K L G + A N L +A FV RI +G L E AILYR++ + Sbjct: 305 ENQFAKSLRAVREAGLRPVVVPARNALQQAEFVAQRILELHRDGIPLHEMAILYRAHFHA 364 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 ++ L + +PY I G+RFFE+ IKD +YLR++ N D+ A++R+ + IG Sbjct: 365 MDVQMELTRRGIPYEIRSGIRFFEQAHIKDVTAYLRILGNPLDELAWKRIFGLCPK-IGK 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +T + + Q + L A RE K ++ A L F E++ L +E Sbjct: 424 KTAEKLWQFLSESGEPLEAALRE-DFLKVVSKTARGGLAFFQEVLIKLREEAVHASTLPD 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +I + G R + + +R E+LE+L + +FS L+ FLS +L Sbjct: 483 LISLIIERGYRKYLRETYTDTA-SREEDLEQLAEFSGKFS---------SLEDFLSELSL 532 Query: 541 EAGEGQ--------ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 D ++ V L T+H AKGLE+ V +VG EGM P + ++ E G Sbjct: 533 MTNMDADGRDKAAGDDLQENKVILSTVHQAKGLEWSVVLLVGCAEGMIPLERAVQEAGGE 592 Query: 593 EEERRLAYVGVTRAMQKLTLTYAET-RRLYGKEVYHRPSRFIGEL 636 EEERRL YV TRA L L Y +T + PSRFI EL Sbjct: 593 EEERRLFYVAATRAKDYLYLCYPQTDYSRWAGFANLSPSRFIREL 637 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 208/650 (32%), Positives = 319/650 (49%), Gaps = 21/650 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND+Q V A +LV+AGAGSGKTR L R+A L++ SP SI+ +TFTNKAA E Sbjct: 36 LNDQQIAVVEAGDGPILVVAGAGSGKTRTLTWRVARLLAE-GASPESILLLTFTNKAAQE 94 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+G++ + GTFH +AH+LLR H + + + ILD ED ++ I Sbjct: 95 MLRRVGEVCRLDTRQITGGTFHHVAHQLLREHGGELGYRKGYSILDREDSSDVMSAAIAD 154 Query: 130 MNL--DEKQWPPRQAMWYINSQKDEGLRP-----HHIQSYGNPVEQTWQKVYQAYQEACD 182 L +++P + + S P + P+ +V + Y E Sbjct: 155 CGLAVGARRFPKADVLIDLVSMAVNTQTPLADVLADRRPQFVPLTDDVLRVARRYAERKH 214 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LLL L + + + R+ ++LVDE+QDTN +Q + L+AG+ Sbjct: 215 ELNAMDFDDLLLNWKILLAEREAVRRAVAGRYRHVLVDEYQDTNRLQGDVVDLVAGEHRN 274 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY +RGA NI F +P A L NYRST IL ANA I N Sbjct: 275 LCVVGDDAQSIYAFRGAHFANILEFEKRYPDARRYDLTVNYRSTPQILGLANASIAANVR 334 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 + K+L + DG ++ +A FV R+ +D G L E A+LYR++ + Sbjct: 335 QFEKELTSVRPDGTLPAVVPCREVQQQAAFVAQRVLELRDEGIPLPEIAVLYRAHHHAME 394 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 ++ L + +P+ + G+RFFE +KD L++LR + N D+ A +R + T G+G T Sbjct: 395 IQFELARRGIPFVVRSGVRFFEAAHVKDVLAHLRFVRNPGDELALKRCL-KITPGVGTAT 453 Query: 423 LDVVRQTSRDRQLTLWQACRELLQ---EKALAGRAASALQRFMELIDALAQETADMPLHV 479 + V R+ ELL + + + ++ EL+ AL+++ Sbjct: 454 AEGVWNAFLARRQRGAGTVDELLAPDVASHVPPKGRAGYRKLAELLRALSRKPTAELPGE 513 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++VI+ G Y + + +R+E+L +L R + E+ E + + L+ Sbjct: 514 AIEKVIE--GGYEDYLRAEFLNADSRVEDLRQLAEYARGY---EDTETFLAEISLLTELT 568 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 E D + V L ++H AKGLE+ VF+V + +G FPS +L + EEERRL Sbjct: 569 AETVSEGGDPDEKMV-LSSVHQAKGLEWRAVFVVWLSDGRFPSAQALKDRDGEEEERRLF 627 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEV-YHRPSRFIGELP--EECVEEVRL 646 YV TRA +L LTY +E + SRF+ ELP E E +L Sbjct: 628 YVACTRAKDELYLTYPILAAPRDRERVVMKASRFVEELPGEPELFERWQL 677 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 604 bits (1559), Expect = e-171, Method: Composition-based stats. Identities = 220/660 (33%), Positives = 334/660 (50%), Gaps = 30/660 (4%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LND+Q AV A LLVLAGAGSGKTR L +R+A+L+S P I+ +TFTNKAA Sbjct: 20 AQLNDEQFAAVTAEPGPLLVLAGAGSGKTRTLTYRVAYLLS-RGVKPGEILLLTFTNKAA 78 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM HR+ L G W GTFH L HR LR + LP++F ILD+++ LLK+ + Sbjct: 79 KEMLHRVQDLTGIEPQRFWGGTFHSLGHRALRIYGDAIGLPKNFTILDADESESLLKQAV 138 Query: 128 K---AMNLDEKQWP-PRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQ----AYQE 179 + + +K P P ++ ++ + P + AY Sbjct: 139 EHEDKLFFKDKTNPRPGPLFDVLSLARNTQQPLADTVAKNFPQYTEIAHRFPAFATAYAT 198 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +VD+ +LL EL + P + Q++ RF ++LVDE+QDTN +Q + LA Sbjct: 199 RKREQNVVDYDDLLEFWLELLIKAPEVAQYFAHRFRHVLVDEYQDTNTLQAQIVDRLAA- 257 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL-IE 298 VM VGDD Q IY WRGA ENI F + PG R+E NYRST IL+ AN + + Sbjct: 258 HHCVMAVGDDAQCIYSWRGANFENIMTFPDRHPGTAIHRIETNYRSTPEILNFANGVLLA 317 Query: 299 NNNGRL-GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRS 356 GR K+L + + A ++ ++A F++ RI+ D G +L E AILYRS Sbjct: 318 QPKGRHFDKELRAARGHAQKPFVVQAMDDREQAEFILKRIRALVEDEGVSLNEVAILYRS 377 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + + ++ AL +A +PY+I G++FFERQ I+D ++ LR + N D A++R+ Sbjct: 378 HFLALEVQLALSRAGVPYQITSGVKFFERQHIRDLVALLRFVYNGADTQAWQRI-AVLLP 436 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ-RFMELIDALAQETADM 475 IG++ + + D + ++L + + A + + +L++ M Sbjct: 437 KIGEKGAQKIYAAAVDHARLTQKNLLDVLNTDDVRSKVAKDARDDWASFCASLSEVAEKM 496 Query: 476 PLHVQTDRVIKDS-GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 D V G Y + + R++ L+ LV ++F Q F Sbjct: 497 QHARPADAVATAIEGWYGDYLKGQYADYLDRLDELKALVGFAQRFEET---------QDF 547 Query: 535 LSHAAL---EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L+ L E + D +AV+L T+H AKGLE+ VF++G+ +G FP + S+ E G Sbjct: 548 LAQIVLLNSETSDRHVDPEAEAVRLTTVHQAKGLEYDVVFVIGLADGQFPGRRSI-ESGD 606 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEERRL YV VTRA +L L+Y + G + PSRF+ E+P + E +R++ + Sbjct: 607 VEEERRLFYVAVTRARNELYLSYPKVATRGGPGGMLLTPSRFLLEVPTDLYEPLRIKRSY 666 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms Rep... 979 0.0 UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 942 0.0 UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 942 0.0 UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellul... 936 0.0 UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 932 0.0 UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomy... 930 0.0 UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellula... 928 0.0 UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicut... 922 0.0 UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicut... 917 0.0 UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicu... 915 0.0 UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicu... 915 0.0 UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclo... 911 0.0 UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas f... 908 0.0 UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria... 903 0.0 UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actino... 902 0.0 UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia ... 902 0.0 UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 T... 902 0.0 UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 900 0.0 UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostri... 900 0.0 UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinom... 899 0.0 UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicu... 897 0.0 UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria... 896 0.0 UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostri... 892 0.0 UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostri... 892 0.0 UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 891 0.0 UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammapro... 890 0.0 UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM 885 0.0 UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomy... 885 0.0 UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium R... 884 0.0 UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacteri... 882 0.0 UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothe... 882 0.0 UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerof... 880 0.0 UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 879 0.0 UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostrid... 877 0.0 UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfu... 877 0.0 UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobact... 876 0.0 UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acido... 876 0.0 UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=E... 876 0.0 UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum... 875 0.0 UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7N... 874 0.0 UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillone... 873 0.0 UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=R... 872 0.0 UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacter... 871 0.0 UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaeroco... 870 0.0 UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7R... 870 0.0 UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gam... 869 0.0 UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 866 0.0 UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinom... 866 0.0 UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialiste... 865 0.0 UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteri... 861 0.0 UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betapro... 861 0.0 UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomy... 860 0.0 UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n... 860 0.0 UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellula... 860 0.0 UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter wo... 859 0.0 UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidamin... 857 0.0 UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 857 0.0 UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3... 855 0.0 UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicu... 855 0.0 UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax... 853 0.0 UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptonip... 852 0.0 UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira Re... 852 0.0 UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J01... 851 0.0 UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bact... 851 0.0 UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacter... 848 0.0 UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7... 847 0.0 UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomy... 847 0.0 UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidale... 846 0.0 UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria Re... 844 0.0 UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotro... 844 0.0 UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermode... 843 0.0 UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haem... 842 0.0 UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermop... 842 0.0 UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=... 842 0.0 UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia ma... 841 0.0 UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomi... 840 0.0 UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51M... 839 0.0 UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6... 837 0.0 UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus Re... 837 0.0 UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepI... 837 0.0 UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobi... 836 0.0 UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA heli... 835 0.0 UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria Re... 834 0.0 UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3... 833 0.0 UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifi... 833 0.0 UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifi... 833 0.0 UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY... 832 0.0 UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmat... 831 0.0 UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntroph... 830 0.0 UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes... 830 0.0 UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas ... 827 0.0 UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 ... 827 0.0 UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66... 827 0.0 UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=... 827 0.0 UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=... 826 0.0 UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcace... 825 0.0 UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bactero... 823 0.0 UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=c... 820 0.0 UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Cand... 819 0.0 UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales Re... 817 0.0 UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04... 816 0.0 UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobac... 815 0.0 UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales... 815 0.0 UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus R... 814 0.0 UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrov... 814 0.0 UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID... 811 0.0 UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=B... 811 0.0 UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostri... 810 0.0 UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotel... 810 0.0 UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bactero... 808 0.0 UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VC... 807 0.0 UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma wh... 806 0.0 UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=... 806 0.0 UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacte... 805 0.0 UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces ... 804 0.0 UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha pr... 803 0.0 UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=C... 802 0.0 UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 801 0.0 UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF... 798 0.0 UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferroox... 796 0.0 UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A... 791 0.0 UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimo... 791 0.0 UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7... 791 0.0 UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A... 791 0.0 UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fu... 791 0.0 UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacte... 791 0.0 UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepI... 790 0.0 UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID... 790 0.0 UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum... 789 0.0 UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB 787 0.0 UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bactero... 785 0.0 UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipe... 785 0.0 UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxyda... 784 0.0 UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=M... 783 0.0 UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 783 0.0 UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii P... 779 0.0 UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cel... 777 0.0 UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 Re... 777 0.0 UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis A... 776 0.0 UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomyceta... 775 0.0 UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira R... 773 0.0 UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM ... 772 0.0 UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bul... 771 0.0 UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 ... 770 0.0 UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyro... 770 0.0 UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 Rep... 770 0.0 UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum D... 766 0.0 UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus ... 764 0.0 UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD... 764 0.0 UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia ... 763 0.0 UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5P... 762 0.0 UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae Re... 760 0.0 UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergis... 760 0.0 UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36... 759 0.0 UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa ... 758 0.0 UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteob... 755 0.0 UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammapro... 753 0.0 UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyogl... 751 0.0 UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosu... 750 0.0 UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteob... 750 0.0 UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPa... 748 0.0 UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepI... 748 0.0 UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q25... 746 0.0 UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteoba... 746 0.0 UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Ta... 742 0.0 UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=... 742 0.0 UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipel... 742 0.0 UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacteri... 739 0.0 UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacteri... 738 0.0 UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax... 738 0.0 UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachl... 738 0.0 UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocy... 735 0.0 UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctom... 735 0.0 UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithio... 734 0.0 UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria... 733 0.0 UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=F... 732 0.0 UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mo... 731 0.0 UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus... 731 0.0 UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma ar... 731 0.0 UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria... 730 0.0 UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria ... 727 0.0 UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria Rep... 726 0.0 UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureapla... 724 0.0 UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma pe... 722 0.0 UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms Rep... 722 0.0 UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP fa... 722 0.0 UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 721 0.0 UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobac... 719 0.0 UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma R... 718 0.0 UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter... 718 0.0 UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synovi... 715 0.0 UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma homini... 714 0.0 UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_T... 713 0.0 UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospi... 712 0.0 UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapo... 711 0.0 UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira R... 709 0.0 UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=C... 709 0.0 UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica ... 708 0.0 UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acid... 708 0.0 UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 706 0.0 UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=... 705 0.0 UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogen... 705 0.0 UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CR... 704 0.0 UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP fa... 704 0.0 UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicu... 702 0.0 UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera ... 702 0.0 UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms Re... 701 0.0 UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteri... 699 0.0 UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia ... 696 0.0 UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica su... 696 0.0 UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus ... 696 0.0 UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcu... 695 0.0 UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter ... 694 0.0 UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Tricho... 693 0.0 UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio ... 693 0.0 UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreoc... 691 0.0 UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_... 687 0.0 UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofu... 686 0.0 UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=2... 684 0.0 UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales... 682 0.0 UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cel... 682 0.0 UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPa... 681 0.0 UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP fa... 680 0.0 UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=S... 678 0.0 UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30... 677 0.0 UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera ... 676 0.0 UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gi... 675 0.0 UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter ... 674 0.0 UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 ... 673 0.0 UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N... 671 0.0 UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=So... 670 0.0 UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malasse... 668 0.0 UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB... 667 0.0 UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma ast... 666 0.0 UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Pen... 666 0.0 UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas Re... 664 0.0 UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleospor... 662 0.0 UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Met... 662 0.0 UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase Pcr... 659 0.0 UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovora... 658 0.0 UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung)... 655 0.0 UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Ph... 655 0.0 UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM... 654 0.0 UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales Rep... 654 0.0 UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria Re... 650 0.0 UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=... 649 0.0 UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID... 647 0.0 UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma p... 644 0.0 UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax... 643 0.0 UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificac... 642 0.0 Sequences not found previously or not previously below threshold: >UniRef50_P03018 DNA helicase II n=409 Tax=cellular organisms RepID=UVRD_ECOLI Length = 720 Score = 979 bits (2532), Expect = 0.0, Method: Composition-based stats. Identities = 720/720 (100%), Positives = 720/720 (100%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV Sbjct: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL Sbjct: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA Sbjct: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT Sbjct: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN Sbjct: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS Sbjct: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD Sbjct: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ Sbjct: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL Sbjct: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY Sbjct: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG Sbjct: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV Sbjct: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 >UniRef50_Q2RGX9 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=Q2RGX9_MOOTA Length = 729 Score = 942 bits (2437), Expect = 0.0, Method: Composition-based stats. Identities = 292/730 (40%), Positives = 430/730 (58%), Gaps = 18/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ + LN Q+EAV + LLVLAGAGSGKTRVL +R+A L+ P +I+AVTF Sbjct: 4 LADFMALLNGPQQEAVKHRGTPLLVLAGAGSGKTRVLTYRVAALIQE-GVRPENILAVTF 62 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ L+G + G+WV TFH R+LR +F I D++DQ Sbjct: 63 TNKAAQEMKERLEGLVGEAARGLWVSTFHSACVRILRREAHLLGYRPNFVIYDTDDQQAA 122 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEAC 181 LK ++K ++LD+K++PPR I+ K++ P EQ ++Y+ YQE Sbjct: 123 LKEVLKELDLDDKKYPPRSLAQVISMAKNDLKTPERFLDGAATFREQQQGQIYRRYQEKL 182 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +L+++ LW P +L++Y++R+ +ILVDE+QDTN+ QY +RLLAG Sbjct: 183 RELNAMDFDDLIMQTVFLWQQNPLVLRYYQQRWQHILVDEYQDTNHAQYILVRLLAGKGD 242 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQ IYGWRGA + NI F DFP A I LE+NYRST IL AANA+I++N Sbjct: 243 NLCVVGDPDQGIYGWRGADIGNILAFEEDFPRARVILLEENYRSTRPILQAANAVIQHNE 302 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 GR K+LWT +GE + LY A +E DE RF+ + + Q G ++ A+LYR++AQS Sbjct: 303 GRREKRLWTRRREGELLHLYRATDERDEGRFIAGEVYRRHQQEGRPFSDFAVLYRTHAQS 362 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEA +QA +PY I GG++F++R+EIKD L+YLR+IAN +D + R++N P RGIG+ Sbjct: 363 RALEEAFIQAGVPYEIVGGLKFYQRKEIKDILAYLRVIANPDDSLSLLRIINVPRRGIGE 422 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 TL + + +L++ + + R AL+ +E++D L Q+ + + Sbjct: 423 ATLARLEAAATSEGESLYRVLERVDTIPGIPARGRQALRELVEMLDNLRQQQEKITVTDL 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +++++G + E E+ + Q R+ENL+E T TR + + L FL+ AL Sbjct: 483 VATILQETGYQAELEAERTPEAQARLENLKEFQTVTRSYDQGAPES---SLGDFLTQVAL 539 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A AV LMT+H+AKGLEFP VF+ G+EEG+FP SLD+ +EEERRL Y Sbjct: 540 VAESDTYSGNA-AVALMTMHTAKGLEFPVVFLAGLEEGVFPHFRSLDDPAEMEEERRLCY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-----------EVRLRAT 649 VG+TRA + L LT+A TR LYG + + PSRF+ E+P + ++ Sbjct: 599 VGMTRAREVLYLTHAWTRNLYGSTMSNPPSRFLDEIPADLIQGEGTGLRSGVLSRTSEER 658 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 R S +R P + +++G +V+H +G G IV + G G+ + + VAF G+GIK Sbjct: 659 DDRGRSTRRQPAPARSTRASWQVGDKVQHDAWGLGVIVKISGEGDDAIISVAFPGRGIKQ 718 Query: 710 LVAAYARLES 719 L YA + Sbjct: 719 LALRYAPIRK 728 >UniRef50_C8W206 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=C8W206_DESAS Length = 737 Score = 942 bits (2437), Expect = 0.0, Method: Composition-based stats. Identities = 295/730 (40%), Positives = 421/730 (57%), Gaps = 15/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + +L LN Q EAV LL+LAGAGSGKTRVL HRIA L+ E SP++I+A+TF Sbjct: 10 LDEILAGLNPVQAEAVRHVDGPLLILAGAGSGKTRVLTHRIAHLLLSEKVSPFNILAITF 69 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ ++ +WV TFH ++LR QDF + D D+ L Sbjct: 70 TNKAALEMRERVAAILPGVARDLWVATFHSTCLKILRRDGQLLGYGQDFSVYDEGDRHTL 129 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEAC 181 +K IK +N+D+K + P+ I+ K++ + + + Q +Y+ YQ+ Sbjct: 130 IKDCIKELNIDDKTFSPQYVSSIISKAKNKLIDEDKYDREADNILTQKAAGIYKLYQKKL 189 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 VDF +LL L+ P++L+ Y+ +F ILVDE+QDTN +QY +++LA + Sbjct: 190 KTYNAVDFDDLLFLVVRLFKEHPNVLERYQHKFRYILVDEYQDTNYVQYLLVKMLAQKSR 249 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQ IYGWRGA ++NI F D+P A + LEQNYRST NIL AAN +I N Sbjct: 250 NLCVVGDPDQGIYGWRGADIQNILSFERDYPEACVVTLEQNYRSTQNILDAANHIISYNQ 309 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQS 360 GR K+LWTD G PI + + +E EAR VV +IK G + +ECA+LYR++AQS Sbjct: 310 GRKEKRLWTDAGKGSPIIVCKSRDEFAEARHVVEQIKHLHLVEGVSYSECAVLYRTHAQS 369 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEE +L+ +PY I GG+RF+ER+EIKD ++YLR+I N D+ + R++N P RGIGD Sbjct: 370 RVLEEIMLRYGLPYNIIGGLRFYERKEIKDVIAYLRVIVNPADEVSLSRIINVPRRGIGD 429 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +L + + + + A Q L G+A L+ ++ +P+ Sbjct: 430 VSLTKIFAFAAEAGIPAGLAMEMAEQIPGLNGKARKQAALLGSLLQVWRRQQEFLPVTDL 489 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T +++ +G R E E + +TR+ENLEE ++ TR + + L FLS +L Sbjct: 490 TVDILERTGYRQELEYEGTVEARTRLENLEEFLSVTRLYDLETVEGT---LGEFLSELSL 546 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + + + V +MTLH+AKGLEFP VF+V MEEG+FP +L + G LEEERRLAY Sbjct: 547 VTDADRDNGEAERVNMMTLHTAKGLEFPFVFLVAMEEGIFPHNRALSDAGELEEERRLAY 606 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV-------EEVRLRATVSRP 653 VG+TRA QKL L+Y+ R +YG Y RPSRF+ E+P + V E ++ V + Sbjct: 607 VGMTRARQKLYLSYSFQRTIYGNTNYCRPSRFLEEIPVDLVSGAHPYEERQKINTQVKKQ 666 Query: 654 VSHQRMGTPMVEND---SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 + V+ + LG +V HAK+G G IV + G G ++ LQVAF G+K L Sbjct: 667 QETSKRNQTTVKKPAAGQNFVLGDKVHHAKWGTGVIVGVSGLGSNAVLQVAFPDMGVKSL 726 Query: 711 VAAYARLESV 720 A YA LE + Sbjct: 727 SAGYAPLEKI 736 >UniRef50_Q8CRT9 ATP-dependent DNA helicase pcrA n=245 Tax=cellular organisms RepID=PCRA_STAES Length = 729 Score = 936 bits (2420), Expect = 0.0, Method: Composition-based stats. Identities = 287/728 (39%), Positives = 440/728 (60%), Gaps = 14/728 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ L+ ++N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+I+A+TF Sbjct: 1 MNALVKNMNSEQSEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNILAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ L+G +W+ TFH + R+LR + ++F I+D DQ + Sbjct: 61 TNKAAKEMKARVEHLVGEEAQVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEAC 181 +K ++K+ N+D K++ PR + I++ K+E P Q N Q VY+ YQ Sbjct: 121 IKDVLKSENIDSKRFEPRMFIGAISNLKNELKTPEDAQKEANDFHSQMVATVYKGYQRQL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R +DF +L++ L+ P L++Y+ +F I VDE+QDTN QY ++LLA Sbjct: 181 SRNEALDFDDLIMTTINLFERVPETLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLANKFK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIYGWRGA ++NI F D+P A+TI LEQNYRST NIL+AAN +I++N+ Sbjct: 241 NLCVVGDSDQSIYGWRGADIQNILSFEEDYPEAKTIFLEQNYRSTKNILNAANEVIKHNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT + G+ I Y A E DEA +VV I Q +G +E AILYR+NAQSR Sbjct: 301 ERKPKGLWTANSGGDKIQYYEAMTERDEAEYVVKEIMKHQRSGKKYSEMAILYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEE +++++PY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RGIG Sbjct: 361 VLEETFMKSNIPYTMVGGQKFYDRKEIKDLLSYLRVIANSNDDISLQRIINVPKRGIGPS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 +++ ++ + ++++ A E+ L+ + F E+I L +E + + Sbjct: 421 SVEKIQTYALQNNISMFDALAEV-DFIGLSKKVTQECISFYEMIQNLIKEQEFLEISEIV 479 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D V++ SG R M ++E+ + ++R+ENL+E ++ + + N E+ L FL+ +L Sbjct: 480 DEVLQKSGYRDMLDREQSIESRSRLENLDEFMSVPKDYEENTPLEE-QSLINFLTDLSLV 538 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLA 599 A +ADT Q+ V LMT+HSAKGLEFP VFI+GMEE +FP ++ +EEERR+ Sbjct: 539 ADIDEADT-QNGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMEEERRIC 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR--------LRATVS 651 YV +TRA + L +T A TR L+G+ + PSRF+ E+PE+ ++ ++ Sbjct: 598 YVAITRAEELLYITNATTRMLFGRSQSNMPSRFLKEIPEDLLDSHTGQKRQTISPKSQPK 657 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R S + T + S +K+G +V H +GEG + N+ L + F+ +G K L+ Sbjct: 658 RGFSKRTTSTKKQVSSSDWKVGDKVMHKAWGEGMVSNVNEKNGSVELDIIFKSEGPKRLL 717 Query: 712 AAYARLES 719 A +A + Sbjct: 718 AQFAPITK 725 >UniRef50_B1I553 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=B1I553_DESAP Length = 718 Score = 932 bits (2410), Expect = 0.0, Method: Composition-based stats. Identities = 294/717 (41%), Positives = 411/717 (57%), Gaps = 11/717 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LN Q EAV P LLVLAGAGSGKTRVL RIA+L+ V P+ I+A+TFTN Sbjct: 8 DFLTELNPAQAEAVCHPGGPLLVLAGAGSGKTRVLTSRIAYLVRVHRVEPHRILAITFTN 67 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 +AA EM+ R+ L+ + +WV TFH R+LR ++F I D DQ ++K Sbjct: 68 RAAREMKERVASLVPHAVDDLWVMTFHAACLRILRREIEKLGYSKNFVIYDEADQQTVIK 127 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQEACDR 183 +K +NL+ +Q PP I+ QK+ + P Q +VY AYQ +R Sbjct: 128 DCLKELNLEPRQHPPAMFSAAISWQKNALVGPAEFAGAAYDQHQELTARVYAAYQARLER 187 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +LL A L+ P +L+ YR RF ++LVDE+QDTN+ QY + LLA + Sbjct: 188 NNALDFDDLLFLAVRLFREFPPVLEQYRRRFLHLLVDEYQDTNHAQYVLVNLLAQTHRNL 247 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQ IYGWRGA + NI F D+P A ++LEQNYRST IL AAN +I N R Sbjct: 248 TVVGDPDQCIYGWRGADLRNILNFERDYPDARVVKLEQNYRSTGRILEAANHVIRFNRHR 307 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LWT GE L+ A +E EARFV I+ + G + + A+ YR++AQSRVL Sbjct: 308 KEKELWTARGAGEAPVLHQARDERAEARFVAREIRRLRAQGRSYRDFAVFYRTHAQSRVL 367 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+ LL+ +PY I GG++F++R+EIKD L+YL+LI N +DD A R++N P RG+G +L Sbjct: 368 EDELLRHGVPYTIIGGVKFYDRKEIKDLLAYLKLIVNPDDDVALTRIINVPRRGVGKASL 427 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 R+ + A RE + + L+ A+ E + + + + T++ Sbjct: 428 VKFFAYVRESSVACADALREADRIRGLSAGVREAMGALGEQLARWRER--EGGVTGLTEQ 485 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 V+++SG T E E+ + +TR+ENL E ++ TR+F L FL+ AL Sbjct: 486 VLEESGYLTALEAERTVEARTRMENLSEFLSVTREFDLQRGGT----LAEFLNDLALYTD 541 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + D V LMTLHSAKGLEFP VF+ GMEEG+FP + E +EEERRL YVG+ Sbjct: 542 LDRFDGESSQVTLMTLHSAKGLEFPVVFLTGMEEGVFPHTRAFSEPVEMEEERRLCYVGI 601 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPM 663 TRA ++L LT AE+R LYG Y PSRF+ E+P E A + + +R T Sbjct: 602 TRARERLFLTLAESRLLYGNVYYGVPSRFLREIPPELFAGGEPEAGAAAEQAAERPETGR 661 Query: 664 VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 E ++ G RV H K+GEG +V +G+G ++++VAF QG+K L+ YA LE + Sbjct: 662 AE----FRPGDRVWHGKWGEGMVVQTDGTGLDAQVKVAFPDQGVKTLMVRYAPLELL 714 >UniRef50_D1A297 ATP-dependent DNA helicase PcrA n=3 Tax=Actinomycetales RepID=D1A297_THECD Length = 768 Score = 930 bits (2405), Expect = 0.0, Method: Composition-based stats. Identities = 294/759 (38%), Positives = 417/759 (54%), Gaps = 44/759 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LLD LN +QR AV LL++AGAGSGKTRVL HRIA+L++ + P I+A+TFTNK Sbjct: 10 LLDGLNPQQRAAVLHTGGPLLIVAGAGSGKTRVLTHRIAYLLAERDVHPAQILAITFTNK 69 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ L+G G MWV TFH R+LR P +F I D+ D RL+ Sbjct: 70 AAGEMRERVQALVGPRSGAMWVMTFHSACVRILRREARRLGFPSNFSIYDAADAQRLMAL 129 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDRA 184 + + ++LD +++PP+ +++ K+E + ++ + +EQ + Y+ YQ +A Sbjct: 130 VCRELDLDPRRYPPKSFSAQVSNLKNELIDYEAFKARASTHLEQKLAEAYEMYQARLQQA 189 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG------ 238 G +DF +L++ L P +HYR RF +ILVDE+QDTN+ QY +RLL Sbjct: 190 GAMDFDDLIMTTVHLLQAFPEAAEHYRRRFRHILVDEYQDTNHAQYELVRLLTESPGEDV 249 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 ++ +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST ILSAANA+IE Sbjct: 250 GPAELCVVGDADQSIYAFRGATIRNILEFERDFPDATTILLEQNYRSTQTILSAANAVIE 309 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSN 357 N R K+LW+D +GE I Y A NE DEA FV + D G A + A+ YR+N Sbjct: 310 RNAHRKPKRLWSDQGEGEKIVGYVADNEHDEAAFVAAEVDRLTDAGLARPGDVAVFYRTN 369 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV EE ++ +PY++ GG+RF+ER+E++D L+YLR++AN D + R++N P RG Sbjct: 370 AQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDLLAYLRVLANPADTVSLRRILNVPRRG 429 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGDR V + ++T W+A R Q +A R+A A++ F+ L+D L + A Sbjct: 430 IGDRAEACVEAHAARERITFWEALRTPEQVPGMAPRSAKAVREFVALMDDLRERAATATP 489 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN--------------E 523 + V+ ++G + + + +TRIENL EL R+F Sbjct: 490 AELIEAVLTETGYLAELQNSRDPQDETRIENLRELEAVAREFEDRLAERVPAAEEEEEEA 549 Query: 524 EDEDLMPLQAFLSHAALEAGEGQADTWQDA---------------VQLMTLHSAKGLEFP 568 L FL +L A + A V LMTLH+AKGLEFP Sbjct: 550 PSGAAGRLVDFLEQISLVADADAIPGTKGAPIPPGERAPEDEQGVVTLMTLHTAKGLEFP 609 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VF+ GME+G+FP ++ LEEERRLAYVG+TRA Q+L LT A R +G + Sbjct: 610 VVFLTGMEDGVFPHLRAMSNPQELEEERRLAYVGITRARQRLYLTRAVMRSAWGAPQVNP 669 Query: 629 PSRFIGELPEECVEEVRLRATVSRPV------SHQRMGTPMVENDSGYKLGQRVRHAKFG 682 SRF+ E+P V+ R A + + + G +V H FG Sbjct: 670 ASRFLSEVPSSLVKWEREAAMPAPGSLTAMAAARPAARSASARAVPALSPGDKVTHDSFG 729 Query: 683 EGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYARLESV 720 GT+++++G+G+ + + F G G+K LV YA LE + Sbjct: 730 LGTVISVDGTGDKTAASIDFGGTHGVKRLVLRYAPLEKL 768 >UniRef50_Q6GFF2 ATP-dependent DNA helicase pcrA n=81 Tax=cellular organisms RepID=PCRA_STAAR Length = 730 Score = 928 bits (2399), Expect = 0.0, Method: Composition-based stats. Identities = 291/730 (39%), Positives = 437/730 (59%), Gaps = 16/730 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LL+ +N +Q EAV LL++AGAGSGKTRVL HRIA+L+ ++ SPY+++A+TF Sbjct: 1 MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ +L+G +W+ TFH + R+LR + ++F I+D DQ + Sbjct: 61 TNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 +K ++K N+D K++ PR + I++ K+E P Q + Q VY YQ Sbjct: 121 IKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 R +DF +L++ L+ P +L++Y+ +F I VDE+QDTN QY ++LLA Sbjct: 181 SRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFK 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIYGWRGA ++NI F D+P A TI LEQNYRST IL+AAN +I+NN+ Sbjct: 241 NLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT +GE I Y A E DEA FV+ I Q NG + AILYR+NAQSR Sbjct: 301 ERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEE ++++MPY + GG +F++R+EIKD LSYLR+IAN NDD + +R++N P RG+G Sbjct: 361 VLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 +++ V+ + ++++ A E L+ + F ELI +L +E + +H Sbjct: 421 SVEKVQNYALQNNISMFDALGEA-DFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIV 479 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D V++ SG R M E+E + ++R+EN++E ++ + + N E+ L FL+ +L Sbjct: 480 DEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEE-QSLINFLTDLSLV 538 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE--EERRLA 599 A +ADT ++ V LMT+HSAKGLEFP VFI+GMEE +FP ++ G E EERR+ Sbjct: 539 ADIDEADT-ENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEGDHEMQEERRIC 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV----------RLRAT 649 YV +TRA + L +T+A +R L+G+ + PSRF+ E+PE +E + + Sbjct: 598 YVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPF 657 Query: 650 VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 R S + T + S + +G +V H +GEG + N+ L + F+ QG K Sbjct: 658 AKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKR 717 Query: 710 LVAAYARLES 719 L+A +A +E Sbjct: 718 LLAQFAPIEK 727 >UniRef50_A8MLJ7 ATP-dependent DNA helicase PcrA n=3 Tax=Firmicutes RepID=A8MLJ7_ALKOO Length = 739 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 303/724 (41%), Positives = 426/724 (58%), Gaps = 24/724 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN Q+ AV +LVLAGAGSGKTRVL HRIA+L+ + SPY I+A+TFTNKAA E Sbjct: 22 LNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVEEKGVSPYHILAITFTNKAAKE 81 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M+ R+ L+G +WV TFH R+LR ++F I D+ DQ L+K +K Sbjct: 82 MKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYEKNFVIYDTTDQQVLMKDCLKK 141 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDRAGLV 187 NLDEK + PR + I KD + P+ + Q ++Y+ YQ+ + Sbjct: 142 FNLDEKLFQPRMILNEIGRAKDLLIGPNEYLEEFGNDFRNQKIAEIYRLYQDRMKSNNAL 201 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+++ +L+ P +L++Y+ +F ILVDEFQDTN QY I LLA G + +VG Sbjct: 202 DFDDLIMKTVQLFQTHPTVLRYYQNKFKYILVDEFQDTNMAQYTLISLLAKSHGNLCVVG 261 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA + NI F DFP + ++LEQNYRST +IL AAN ++ NN R KK Sbjct: 262 DDDQSIYGWRGADIRNILGFEKDFPNTQVVKLEQNYRSTKSILDAANMVVANNTDRKSKK 321 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEA 366 LWTD DGE I Y A NE DEA F+ I+ + +E AILYR+NAQSR LEE Sbjct: 322 LWTDNQDGEIIQYYRANNEYDEASFISGTIEKLNEEENRPYSEFAILYRTNAQSRALEEM 381 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L++ ++PY+IY G RF++R+EIKD L+YLR I N DD + +R++N P RGIG +++D Sbjct: 382 LMKRAIPYKIYSGTRFYDRKEIKDILAYLRTIENPVDDVSVKRIINVPKRGIGIKSIDRF 441 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 + + + + + A + Q + R +F ELI +L +M + + + Sbjct: 442 DEYAEGKNESFFGALLHVDQMPDQSTRVKVQTNKFTELIQSLRDRQDEMSVTDIVKEIYE 501 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 +G E + ++RIENL+E ++ T+ F N E + L+ FL+ +LE + Sbjct: 502 KTGYIDALMAEDKIEAESRIENLQEFLSVTKDFDENSEVKT---LEEFLARTSLETTLDE 558 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRA 606 D ++ V LMTLHSAKGLEFP VFI GMEE +FPS MSL E LEEERRL YVG+TRA Sbjct: 559 NDE-ENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQE-NNLEEERRLCYVGITRA 616 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------------EVRLRATVSRPV 654 +KL +++A TR LYG+ + SRF+GE+PEE ++ E++ + + Sbjct: 617 REKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRKRDLKEMQTSPLFTGAM 676 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 HQ+ G N K G +V+H KFG GT+V++ G L +AF GIK + + + Sbjct: 677 MHQKKGNANSINSDAIKAGNKVKHPKFGVGTVVSVAGE----MLTIAFPNSGIKKIASTF 732 Query: 715 ARLE 718 +LE Sbjct: 733 IQLE 736 >UniRef50_D0BN23 ATP-dependent DNA helicase PcrA n=5 Tax=Firmicutes RepID=D0BN23_9LACT Length = 755 Score = 917 bits (2371), Expect = 0.0, Method: Composition-based stats. Identities = 301/752 (40%), Positives = 452/752 (60%), Gaps = 43/752 (5%) Query: 11 NDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEM 70 ND+Q+EAV + LL++AGAGSGKTRVL HR+A++++ E P++I+A+TFTNKAA EM Sbjct: 2 NDRQKEAVQHTQGPLLIMAGAGSGKTRVLTHRMAYILAEEEVHPWNILAITFTNKAAREM 61 Query: 71 RHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAM 130 + R+ QL+G MWV TFH + R+LR + F I D +Q +KR++K + Sbjct: 62 KERVSQLVGPQAEDMWVSTFHSMCVRILRRDIELLGYQRSFTICDPSEQQTAMKRILKKL 121 Query: 131 NLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 ++D +++ R + I+ K++ + Y VEQ K Y+ YQ+ ++ +DF Sbjct: 122 DIDSEKYDYRMILNRISQAKNDLEDVEEFSKKYTGYVEQIIAKCYREYQKELAKSMTLDF 181 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +L++ +L+ P LQ+Y+++F I VDE+QDTN+ QY + +LA + +VGD Sbjct: 182 DDLIMLTVQLFQKHPETLQYYQQKFQYIHVDEYQDTNHAQYRLVTMLAKKFKNICVVGDA 241 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIYGWRGA + NI F D+ A+ + LEQNYRST IL AAN +IENN R KKLW Sbjct: 242 DQSIYGWRGADMSNILEFEKDYQNAKVVLLEQNYRSTKTILQAANHVIENNFNRKVKKLW 301 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQ 369 T+ +G+PI+ Y A +E DE R+V+++I++ +G + AILYR+NAQSRV+EE LL+ Sbjct: 302 TENEEGQPITYYRAQSEQDEGRYVLSQIQSLLRDGYHYDDFAILYRTNAQSRVMEENLLK 361 Query: 370 ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQT 429 +++P+R+ GG RFFER EIKD L+YLRLI N DD +F R+VN+P RGIG +LD + Sbjct: 362 SNIPFRLVGGQRFFERLEIKDLLAYLRLIVNPQDDLSFRRIVNSPKRGIGATSLDKLNDF 421 Query: 430 SRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSG 489 + Q +L +A ++ L+G+AA AL++F E+I+ L + + + ++VI+ +G Sbjct: 422 ASMHQFSLLEASSQIA-ISPLSGKAAKALEKFAEMIEDLRKMQEFLSISEFVEQVIEKTG 480 Query: 490 LRTMYEQEKGEKGQTRIENLEELVTATRQFSYN--EEDEDLMPLQAFLSHAALEAGEGQA 547 EQ+ + RIEN++E ++ +QF + EE+ + PL FL+ +L + Sbjct: 481 YLAALEQQHTMEADARIENIQEFISVAKQFEQDRLEEESEDSPLLQFLTDLSLVSDADSD 540 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-DEGGRLEEERRLAYVGVTRA 606 D V LMTLH+AKGLEFP VFI+G+EEG+FPS S+ + G +EEERRLAYVG+TRA Sbjct: 541 DGDGRMVTLMTLHAAKGLEFPVVFIIGLEEGIFPSLRSIMENGDDVEEERRLAYVGITRA 600 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE----------------------- 643 QKL LT A +R LYG+ +RPSRF+ E+ E+ + Sbjct: 601 EQKLFLTNAYSRLLYGRTQTNRPSRFLLEIGEDLFDSKQQQSYSYTSRESSSFTSKTSSS 660 Query: 644 ---------------VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVN 688 + +A + R T + + +K+G +V H K+ GT+V Sbjct: 661 GSLFDKYRAKSQATAYQPKAVQPSSIQPVRKQTVTANDGAVWKVGDKVMHKKWNVGTVVK 720 Query: 689 MEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G + + VAF G GIK L+A++A +E + Sbjct: 721 VTGEGTNQEIDVAFAGMGIKRLLASFAPIERI 752 >UniRef50_C4Z8S4 ATP-dependent DNA helicase PcrA n=17 Tax=Firmicutes RepID=C4Z8S4_EUBR3 Length = 763 Score = 915 bits (2366), Expect = 0.0, Method: Composition-based stats. Identities = 285/764 (37%), Positives = 422/764 (55%), Gaps = 54/764 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QREAV LL+LAGAGSGKTRVL +R A+L+ +PY+IMA+TFTNKA Sbjct: 3 LDMLNEQQREAVLTTEGPLLILAGAGSGKTRVLTYRTAYLIDECGVNPYNIMAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR RI ++G +WV TFH R+LR + +F I D++DQ L+K + Sbjct: 63 AGEMRERIDDMVGYGSESIWVSTFHSTCVRILRRYIDRLGYDTNFTIYDADDQKALMKDI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDRA 184 K + +D K + + + I+S KDE + P ++ G+ V++ VY+ YQ A + Sbjct: 123 CKRLEIDTKMYKEKMFLNVISSAKDEMIDPIEFENRFTGDFVKRKQALVYKEYQNALKQN 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL++ EL+ +L +Y+ERF I+VDE+QDTN +Q+ IRLLA + Sbjct: 183 NALDFDDLLVKTVELFKLDKEVLDYYQERFRYIMVDEYQDTNTVQFELIRLLAMKYKNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA + NI F F A+ I+LEQNYRST NIL AAN++I NN GR Sbjct: 243 VVGDDDQSIYKFRGANIYNILNFEKHFEDAKVIKLEQNYRSTQNILDAANSVISNNVGRK 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSRVL 363 K+LWTD G+ I+ + +EA +V I G +CA+LYR+NAQSR+ Sbjct: 303 DKRLWTDNGAGDRITFEQLESGFEEADYVARSIARLVRKGEARYKDCAVLYRTNAQSRLF 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE + A++PY+I GG+ F+ R+EIKD L+YL+ I N +DD A +R++N P RGIG ++ Sbjct: 363 EEKFIAANIPYKIVGGVNFYARKEIKDILAYLKTIDNGHDDLAVKRIINVPKRGIGATSI 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + V + ++ + + A R + + + R+A ++ F+ I +L + Sbjct: 423 NKVTDYAIEKGIDFYTALRYVDEVPGM-ARSAGKIKPFVMFIQSLRARAEMDSVSQLIQA 481 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I ++G + E ++ + RIEN++EL+ + EE+ L FL AL A Sbjct: 482 IIDETGYVDELKAEGTDEAEQRIENIDELINKAVDYEQGEENPT---LSGFLEEVALVAD 538 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG---RLEEERRLAY 600 D D V LMTLHSAKGLEFP V++ GME+G+FPS MS+ +EEERRLAY Sbjct: 539 IDGLDENSDYVVLMTLHSAKGLEFPNVYLAGMEDGLFPSYMSITSDDATSEIEEERRLAY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC--------------VEEVRL 646 VG+TRA + LT+T A R + G+ +++ SRF+ E+P E +E Sbjct: 599 VGITRAKEHLTITSARMRMVRGETQFNKVSRFVKEIPRELMSGEVYEPKRRDDDIERNSQ 658 Query: 647 RATVSRPVSHQRMGTPMVENDS------------------------------GYKLGQRV 676 + ++ T E + YK+G RV Sbjct: 659 STYRKAKEAFKKTPTYGTEYATTFNTQRTRTPVYTPVSNQKSFASANTTGGLSYKVGDRV 718 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 H KFG G ++ + G + V F G K + A++A+L+ + Sbjct: 719 SHIKFGAGEVMAIVEGGRDYEVTVDFDKAGTKKMFASFAKLKKI 762 >UniRef50_B8FP41 ATP-dependent DNA helicase PcrA n=10 Tax=Firmicutes RepID=B8FP41_DESHD Length = 755 Score = 915 bits (2365), Expect = 0.0, Method: Composition-based stats. Identities = 301/754 (39%), Positives = 431/754 (57%), Gaps = 42/754 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ LN QR+AV LL+LAGAGSGKTRVL +RIA L++ + P+ I+A+TFTNKA Sbjct: 4 LEDLNPVQRQAVEHREGPLLILAGAGSGKTRVLTYRIAHLIA-QGVEPWHILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLRLLKR 125 A EMR R+ L+G+ G+WV TFH R+LR+ + F I DS DQL L+K Sbjct: 63 AQEMRDRVYSLVGSEGRGLWVATFHSACVRILRSEIGYLPGYSRSFVIYDSGDQLALIKS 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRA 184 +K +NLDEK++ PR I+ K++ L P + + EQ ++VY+ Y + Sbjct: 123 CMKELNLDEKKFAPRAIEAVISDAKNKLLTPEDFSRRAKDYFEQKAERVYELYLKKLLAN 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF ++++ L+ P +L Y+++F ILVDE+QDTN+ QYA + LLA + Sbjct: 183 NALDFDDIIMLTVRLFRENPEVLSQYQDKFRYILVDEYQDTNHAQYALVNLLAKKYRNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY +RGA V+NI F D+P A+T++LEQNYRST +IL AAN++++NN R Sbjct: 243 VVGDDDQSIYMFRGADVQNILDFERDYPEAKTLKLEQNYRSTKSILQAANSVVQNNTERK 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVL 363 K LWT+ DG+PI Y A NE DEAR++ RI+ + G E A+LYR+NAQSRV+ Sbjct: 303 EKSLWTENEDGQPIVYYVADNEHDEARYMGERIQRLLNVEGRKFNEFAVLYRTNAQSRVI 362 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE ++ +PYRI+ G++F+ER EIKD L+YLR++ N D +F RV+N P RG+G+ TL Sbjct: 363 EERFMKEGIPYRIFSGLKFYERMEIKDILAYLRILHNPADQVSFSRVLNVPKRGLGESTL 422 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHVQTD 482 + + + ++++ + A E L RA L F L+ L A+ + + Sbjct: 423 EKILDYANEQEMPVLDAIMEADYIPELQSRAKKPLLAFAHLMQELRALAAAESSVTKLVE 482 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE------------EDEDLMP 530 V+K +G +K + + R+ENL E ++ T ++ ED + Sbjct: 483 EVLKRTGYWDNLVSDKSPEAEARLENLREFLSVTAEYDEKADNYETAVVQEGIEDALVPG 542 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L FL +L A D DAV +MT+HSAKGLEFP VF+ GMEEG+FPS S+ + Sbjct: 543 LTGFLEQVSLVAQIDSLDQADDAVVMMTIHSAKGLEFPVVFLGGMEEGIFPSSRSMLDPV 602 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE-CVEEVRLRAT 649 L EERRL YV +TRA ++L L YA+ R LYG+ Y+RPS F E+P V+ + Sbjct: 603 LLAEERRLCYVAITRARERLYLAYAQQRMLYGRTQYNRPSEFFQEIPTHVLVDRDPIDPP 662 Query: 650 VSRPVS-----------------------HQRMGTPMVENDSGYKLGQRVRHAKFGEGTI 686 +R YK+G++V HAKFG+G I Sbjct: 663 PTRAQKAHSAAARPAATPSGGPSPWRTGERTIGNPVQDAPGVDYKVGEKVEHAKFGKGVI 722 Query: 687 VNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 V ++G G + L V F G+ IK L+A YARL + Sbjct: 723 VAIKGEGSSAELSVVFGGE-IKKLMAEYARLVKL 755 >UniRef50_C8WTI7 ATP-dependent DNA helicase PcrA n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WTI7_ALIAD Length = 756 Score = 911 bits (2355), Expect = 0.0, Method: Composition-based stats. Identities = 317/748 (42%), Positives = 442/748 (59%), Gaps = 32/748 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L LN+KQREAV A +LV+AGAGSGKT VL RIA+L++ P++I+A+TFT Sbjct: 8 SDILKGLNEKQREAVTATDGPVLVIAGAGSGKTSVLTRRIAYLIAERRVPPWAILAITFT 67 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM RI +L+G +W TFH + R+LR F +LD+ DQ+ L+ Sbjct: 68 NKAAREMEERIERLVGPVASDIWTSTFHAMCARILRRDIHHLGYTSAFTVLDAADQVSLV 127 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACD 182 +RL++ MN+D +++ PR + I+ K+E + G+P ++ VY AY+ Sbjct: 128 RRLMQEMNIDVRKFEPRAVLHAISQHKNELRSAEKALDLAGSPYDKMVGDVYLAYERRLR 187 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL++ EL+ P +L +Y+ RF++I VDE+QDTN+ QY ++LLA Sbjct: 188 ENQALDFDDLLVKTVELFRKVPDVLAYYQHRFSHIHVDEYQDTNHAQYVLVKLLAERRRN 247 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGD DQSIYGWRGA + NI F D+P A IRLEQNYRST IL AN +I++N Sbjct: 248 LCVVGDSDQSIYGWRGADIRNILEFQRDYPDARVIRLEQNYRSTGRILRIANQVIQHNQM 307 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RL K LWTD +GE L+ A +E EA +V + I NG + AILYR+NAQSRV Sbjct: 308 RLEKNLWTDRGEGEKAKLFVAPDERVEADWVADEIARMVANGREYRDVAILYRTNAQSRV 367 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEEA LQ +PYRIYGG+RF+ER+E+KD ++YLRLIAN NDD +F RVVN P RGIGD T Sbjct: 368 LEEAFLQRGIPYRIYGGLRFYERREVKDVIAYLRLIANPNDDVSFLRVVNVPKRGIGDTT 427 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L+ + + +R R +L++A L+ ++ +AASALQ F+ELI L + A +PL TD Sbjct: 428 LEKLAEYARHRGTSLFEAALHALE-AGISKKAASALQSFVELIQTLQLQRAFLPLTDLTD 486 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE-EDEDLMPLQAFLSHAALE 541 ++ SG R E+ + + R+ENL+E ++ TR+F + D ++ L+ FL+H AL Sbjct: 487 ELLDRSGYREALRAERSLEAENRLENLDEFLSLTREFDEDGVPDGEMGALEQFLTHVALV 546 Query: 542 AGEGQADTWQ------DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + D V +MTLH+AKGLEFP VF+VG+EEG+FP + +LD G LEEE Sbjct: 547 SDADLPGGRPGRREDLDEVSMMTLHAAKGLEFPVVFLVGLEEGVFPHRRALDGGEELEEE 606 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE------------ 643 RRL YVG+TRAM++L LT +R L+G+ PSRF+ E+P +E Sbjct: 607 RRLCYVGITRAMERLYLTTCRSRMLFGERRSFTPSRFLSEMPASDIERAGEEDAMFGWGW 666 Query: 644 ----------VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 A + + + Y+ G V H K+G G IV G G Sbjct: 667 RDARAGVRAPAHAVADAASGPRMSVPRSFGADLSVPYEPGDLVEHRKWGRGVIVAKSGEG 726 Query: 694 EHSRLQVAFQG-QGIKWLVAAYARLESV 720 E L V F+ G K L A +A + V Sbjct: 727 ESLELVVRFEDPIGEKRLFAKFAPIHKV 754 >UniRef50_C4V2E0 ATP-dependent DNA helicase n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2E0_9FIRM Length = 746 Score = 908 bits (2348), Expect = 0.0, Method: Composition-based stats. Identities = 284/747 (38%), Positives = 413/747 (55%), Gaps = 33/747 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ LN+ Q+ AVA + LL++AGAGSGKTRVL RIA L+ PY I+A+TFTN Sbjct: 2 DLMQGLNEPQQRAVACLQGPLLIVAGAGSGKTRVLTFRIANLL-EHGVPPYRILAITFTN 60 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN-LPQDFQILDSEDQLRLL 123 KAA EMR R+ L+G + +W+ TFH RLLR ++F I D+ D L+ Sbjct: 61 KAAREMRERVDTLIGDAAQDVWLSTFHSFCARLLRMELEHYGRYAKNFVIYDAADSKGLI 120 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACD 182 + +K +N+DEK P +I+ K+ L + + + K+Y YQ Sbjct: 121 RECLKELNIDEKHTAPGAVQAHISDAKNRLLDVAAFTAQATDFFAEQVAKIYALYQSKLQ 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LL+ EL + Y+++F ILVDE+QDTN QYA +LLA + Sbjct: 181 ENNALDFDDLLMLTVELLTKNEELRMKYQKKFQYILVDEYQDTNGAQYAITKLLAAEHRN 240 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGD DQSIYGWRGA + NI F D+P A I LEQNYRST NIL+AANA+IENN Sbjct: 241 ICVVGDADQSIYGWRGADMRNIMNFEQDYPEATVILLEQNYRSTKNILAAANAVIENNLT 300 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSR 361 R K+LWTD G+ I++Y E +EA ++V ++ + A+LYR+NAQSR Sbjct: 301 RKKKELWTDNPTGDRITIYEGATEKNEASYIVREVERLHTMFHVKYGDIAVLYRTNAQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +EEA +PY + G +RF++R+EIKD ++YLR+I N D + R++N P RG+G Sbjct: 361 NIEEAFYATGVPYAMVGSVRFYDRREIKDIIAYLRVIYNPRDTLSLLRIINVPRRGLGPT 420 Query: 422 TLDVVRQTSRDRQLTLWQACRE---LLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 ++ + +T+ + +++L++ + L L+ + AL+ F ++ + P+H Sbjct: 421 SIARMMETAEEYRISLFEVITDAQLLSMIPKLSAKVKVALEEFAAMVFTFMGQLGTRPIH 480 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + VI+ SG E+EK E + R+ENL E ++ + F E+ + L FL+ Sbjct: 481 EIVEDVIETSGYAAALEEEKKEDNRDRLENLREFISVAKNFDDGAEEGE-NGLADFLAQI 539 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL + Q + V LMT H+AKGLEFP VF+ GMEEG+FP +L + +EEERR Sbjct: 540 ALISDVDQTEQSDGTVTLMTFHAAKGLEFPAVFMAGMEEGLFPHSRTLLDDTEIEEERRT 599 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------------- 643 YVG+TRA ++L LTYA R +YG+ RPSRF+ E+PEE VE Sbjct: 600 CYVGITRAERRLYLTYARQRTIYGRTEMSRPSRFLAEIPEELVEHKEADFFGGADLRAPS 659 Query: 644 ----------VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 R R + + + +K G VRH+K+G+G IV + GSG Sbjct: 660 NIWSERSTRTQRKRYIAPPQHTAADGSVIRPDVSAAFKAGDAVRHSKWGDGRIVAISGSG 719 Query: 694 EHSRLQVAFQGQGIKWLVAAYARLESV 720 E + L +AF G+GIK V YA + + Sbjct: 720 EDAELSIAFPGEGIKKFVQKYAPILKL 746 >UniRef50_A8LAX0 ATP-dependent DNA helicase PcrA n=6 Tax=Bacteria RepID=A8LAX0_FRASN Length = 851 Score = 903 bits (2334), Expect = 0.0, Method: Composition-based stats. Identities = 296/794 (37%), Positives = 413/794 (52%), Gaps = 78/794 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LL+ LN +QR AV S LLV+AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 62 LDPDELLEGLNPQQRAAVVHAGSPLLVVAGAGSGKTRVLTHRIAYLLAARGARPGEILAI 121 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++G MWV TFH R+LR+ F I D+ D Sbjct: 122 TFTNKAAGEMKERVEAIVGGRARAMWVSTFHSACVRILRSEASRLGFGSSFSIYDAADAQ 181 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 RL+ + + ++LD K+ R I++ K+E + + N +E+T +VY AYQ+ Sbjct: 182 RLITLVTRDLDLDPKRHTARGLAAAISALKNELVDWETARDRATNHIERTVAEVYAAYQQ 241 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +A +DF +L++ L P + +HYR RF ++LVDE+QDTN+ QY IR L G Sbjct: 242 RLTQANALDFDDLIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYVLIRELVGR 301 Query: 240 TGK-----------------------------------------VMIVGDDDQSIYGWRG 258 + + +VGD DQSIY +RG Sbjct: 302 SASSADEPAAGSGEAVYSGGSAEPDGAGWPAKAVPPSGAVPSAELCVVGDADQSIYAFRG 361 Query: 259 AQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPI 318 A + NI F DFP A I LEQNYRST ILSAANA+I N R K+LW+D DGE I Sbjct: 362 ANIRNIVEFEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDGERI 421 Query: 319 SLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIY 377 + A NE DEA FV I D A A+ A+ YR+NAQSRV EE ++ +PYR+ Sbjct: 422 VGFVADNEHDEAAFVAEEIDRLGDENLARPADVAVFYRTNAQSRVFEEIFIRVGLPYRVV 481 Query: 378 GGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTL 437 GG+RF+ER+EI+D L+YLR++ N D R++N P RGIGDR +V + ++ Sbjct: 482 GGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVPRRGIGDRAEAMVSAFAERERIAF 541 Query: 438 WQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQE 497 +A + + +A R+A +++ F+ L++ L ++ PL + ++ +G + E Sbjct: 542 SEALSRVDEVPGVATRSARSIRDFVALLEGLREQLPAGPLA-VIEATLERTGYLSELVAE 600 Query: 498 KGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ---ADTWQDAV 554 + Q R+ENL ELV ++F+ D L FL AL A Q D V Sbjct: 601 DTIEAQGRVENLRELVGVVQEFTERRPDGT---LAEFLEQVALVADADQIPDDDGSDGVV 657 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+ G+E+G+FP +L + LEEERRLAYVGVTRA +L LT Sbjct: 658 TLMTLHSAKGLEFPVVFLTGLEDGVFPHMRTLGDPTGLEEERRLAYVGVTRARARLYLTR 717 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV------------------------ 650 ++ R +G+ Y+ PSRF+GE+P+ VE RL Sbjct: 718 SQVRSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAPAAGGGRFSGGGSAGAGNGSGGSG 777 Query: 651 ---SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQG 706 + P G RV H FG G +V G G+ + +V F G Sbjct: 778 GKLPSSPFGAKPSRPAARPIIELTPGDRVTHDTFGLGVVVTTSGVGDSRQAKVDFGAETG 837 Query: 707 IKWLVAAYARLESV 720 K L+ YA +E + Sbjct: 838 TKDLLLRYAPVEKL 851 >UniRef50_B2GM51 ATP-dependent DNA helicase UvrD1 n=10 Tax=Actinomycetales RepID=B2GM51_KOCRD Length = 818 Score = 902 bits (2333), Expect = 0.0, Method: Composition-based stats. Identities = 304/790 (38%), Positives = 417/790 (52%), Gaps = 75/790 (9%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 L+ LN+ QR AV + LL++AGAGSGKTRVL HRIA L++ I+A+T Sbjct: 32 SPEQLVAGLNEPQRAAVEHSGAPLLIVAGAGSGKTRVLTHRIAHLLATGRARRGEILAIT 91 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI +L+G S MW+ TFH L R+LR L +F I DS D LR Sbjct: 92 FTNKAAAEMRERIAELVGDSARTMWISTFHSLCVRILRREAKTLGLNTNFSIYDSADSLR 151 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG---NPVEQTWQKVYQAYQ 178 L+ ++ K LD K++ P+ I++ K+E + + +P E +VY+ Y Sbjct: 152 LITQVAKQHELDPKRFAPKAIQHRISALKNELVDDETCLARASSTDPFESAVAQVYRGYT 211 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + A +DF +L+ ++ P +L++YR RF ++LVDE+QDTN+ QYA +R L G Sbjct: 212 QRLRAANAMDFDDLIGETVHMFRAFPQVLEYYRRRFRHVLVDEYQDTNHAQYALVRELVG 271 Query: 239 DT------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST 286 ++ +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST Sbjct: 272 GDSPGHTDESGIPPAELTVVGDSDQSIYAFRGADIRNITDFERDFPAARTIMLEQNYRST 331 Query: 287 SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GG 345 NILSAANA+I N R KKLWT DG PI Y A NE +EARF+ I QD G Sbjct: 332 QNILSAANAVISQNADRRDKKLWTAEGDGAPIVGYAAENEHEEARFIAEEIDRLQDEHGI 391 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 + A+ YR+NAQSR LEE L++ +PY++ GG RF+ER+EIKDA+SYLR IAN DD Sbjct: 392 RPGDVAVFYRTNAQSRSLEEILMRVGLPYKVVGGTRFYERKEIKDAMSYLRAIANPADDI 451 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 R+VN P RGIGDR + + ++ +A L + LA R+A+A++ F +L+ Sbjct: 452 TVRRIVNEPKRGIGDRAQGSIAALADREGISFSEAMHRLDEAPGLATRSANAIRTFAQLM 511 Query: 466 DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED 525 D L + + + V++ SG + ++R+ENL ELV R+F + + Sbjct: 512 DDLGELAQGASVTAVLEAVLEQSGYLEALRTSTDPQDESRVENLAELVAVVREFEKDRPE 571 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDA-----------------------VQLMTLHSA 562 L FL H AL A Q + D V LMTLH+A Sbjct: 572 ---AGLGEFLEHVALVADADQIPSRPDTAAEGTASAQQIAQEVEEARDQGVVTLMTLHTA 628 Query: 563 KGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG 622 KGLEFP VF+ GME G+FP Q S + +EEERRLAYVG+TRA Q+L +T AE+R L+G Sbjct: 629 KGLEFPVVFLTGMEHGIFPHQRSFADPSSMEEERRLAYVGITRARQRLYITRAESRSLWG 688 Query: 623 KEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH-------------------------- 656 + ++ S F+ E+P ++ R A S Sbjct: 689 QSQFNPASPFLDEIPAHLIDWKREGAAASGGWGSPVHAGSGGGTRDPLRGSSWGAGAGSG 748 Query: 657 ------QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 +G V H FG G++V +EGSG+ + +V F G K L Sbjct: 749 ATFRRLSPSRVEPNREIPSLSVGDAVEHKAFGRGSVVALEGSGDKTVAKVRF-GAEEKRL 807 Query: 711 VAAYARLESV 720 + YA + V Sbjct: 808 LLRYAPMTKV 817 >UniRef50_C7N6W8 DNA/RNA helicase, superfamily I n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6W8_SLAHD Length = 772 Score = 902 bits (2332), Expect = 0.0, Method: Composition-based stats. Identities = 294/773 (38%), Positives = 421/773 (54%), Gaps = 65/773 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 +DSLN+ QREAV LLVLAGAGSGKTRVL +RIA ++ N P+ IMA+TFTNKA Sbjct: 4 IDSLNEPQREAVLCTEGPLLVLAGAGSGKTRVLTYRIAHMVQDLNVPPWQIMAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+G+L+G S GMWV TFH + R+LR + F I D +D RLLK + Sbjct: 64 ANEMRERLGRLVGPSARGMWVSTFHSMCVRILRVDCELLGFSKSFTIYDDDDTKRLLKDV 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRAG 185 + ++LD K+WP I+ K+E P +PV + +VY YQE A Sbjct: 124 MAGLDLDPKRWPVNSIRGKISQAKNELKAPGVYADEARDPVSKVTARVYAVYQERLKMAN 183 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 DF +LL+ + L+ N P +L+ Y++RF +LVDE+QDTN+ QYA +LLA +M+ Sbjct: 184 AFDFDDLLMYTYLLFKNHPDVLEAYQDRFRYLLVDEYQDTNHAQYAITKLLAAKHQNIMV 243 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA + NI F D+P A +I+LEQNYRS+ NIL+AANA++ +N R Sbjct: 244 VGDDDQSIYSWRGADIRNILEFEQDYPQARSIKLEQNYRSSGNILNAANAVVAHNTKRKQ 303 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K+L+T+ DGE I +Y A +E DE R++ I + G + E A+ YR+NAQSR LE+ Sbjct: 304 KRLFTESGDGEKILVYMASDERDEGRWIAGEIDKLHNEGVSYEEMAVFYRTNAQSRSLED 363 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 LL+A +PYRI GG +FF+R EI+D ++YL L N DD A +RV+N P RGIG T++ Sbjct: 364 MLLRAGVPYRIVGGTKFFDRAEIRDVIAYLTLCINPADDMAAKRVINQPRRGIGKTTIEH 423 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + +R+ LT QA L ++ L R +A+ F+ LI+ + L + VI Sbjct: 424 IENVARNSNLTFMQAAEWCLADETLQMRTRNAIGGFVGLINDAQSYGGE--LRKVIEAVI 481 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED------------------ 527 S L EQE+ ++ ++RIEN++E ++ ++ + E ++ Sbjct: 482 DRSQLIQALEQERTDEAESRIENIKEFLSVVDEYVESHEIDESALPPEGINLLADTRQLS 541 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L+ FL L A V LMT+HS+KGLEF VF+ GMEE +FP S Sbjct: 542 PDSLEDFLEWVRLRTDLDAATDDDQFVTLMTVHSSKGLEFDCVFVAGMEETLFPHSNSSR 601 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR 647 + LEEERRLAYV +TRA ++L LT A R+++G+ + SRF+GE+P E + L Sbjct: 602 DPQGLEEERRLAYVAITRARKRLYLTCAYARQIFGETHANPVSRFVGEIPSELRKSAGLG 661 Query: 648 ATVSRPVSHQRMGTP---------------------------------------MVENDS 668 ++ ++ G+ Sbjct: 662 SSGFAGTGWEKRGSRRGISGSGKEAGGGRVFGQSSAGGTRPRSYTGRTSPNAEKKSAARV 721 Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QGQGIKWLVAAYARLESV 720 + +G V H FG G + ++G L + F +G K L+ YA + + Sbjct: 722 TFAVGDIVDHKTFGRGRVTKVDGD----TLHIKFSKGNVTKKLLKDYAPIVKI 770 >UniRef50_A0Q2Q4 ATP-dependent DNA helicase PcrA, putative n=23 Tax=Clostridium RepID=A0Q2Q4_CLONN Length = 760 Score = 902 bits (2331), Expect = 0.0, Method: Composition-based stats. Identities = 266/766 (34%), Positives = 409/766 (53%), Gaps = 52/766 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ L LN +Q EA A +LVLAGAGSGKTRVL +RIA ++ Y+I+A+ Sbjct: 1 MDLKKL---LNKEQYEAATAIEGPVLVLAGAGSGKTRVLTYRIAHMIEDLGIPQYNILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI +L+ + MWV TFH R+LR ++F I DS DQ Sbjct: 58 TFTNKAAGEMKDRIKKLVSNNIDSMWVSTFHSSCVRILRREIDKLGYNKNFAIYDSTDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQ 178 L+K+ +K +N+ +K ++ + I QKD + + + + VY YQ Sbjct: 118 NLVKQCMKELNISDKDINEKEIISKIGKQKDNLITAEEYKKRNEKDFRKNRIADVYLLYQ 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + +DF +L+ + EL+ P +L+ Y+ +F I+VDE+QDTN QY +++LA Sbjct: 178 KKLKNSNALDFDDLIFKTVELFKKHPEVLEFYQNKFKYIMVDEYQDTNKTQYQLVKMLAA 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA ++NI F D+P A+ ++LE+NYRS +NIL+AAN +I+ Sbjct: 238 AHRNIFVVGDDDQCIYQWRGADIKNILDFEKDYPEAKVVKLEENYRSKANILNAANTVIK 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 +N+ R K L T +GE I +Y A++++DE F+ N IK + + AILYR+N Sbjct: 298 HNSQRKNKVLRTQNENGEKIKIYRAYSDMDEGLFISNEIKRLIKKENRSYKDFAILYRTN 357 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV E+ ++ +PYRI GG++F++R+EIKD +YL+ I N DD + +R++N P R Sbjct: 358 AQSRVFEDVFMKRDIPYRIIGGLKFYDRKEIKDITAYLKFINNLQDDISLKRIINVPKRA 417 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ ++ + ++ ++ L+ R+ S++ +F LI+ + + + Sbjct: 418 IGAATVSKIQDFANYMDECMYSVLLDVENIPGLSKRSISSINKFTSLINGFTRTKDKVSV 477 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ +G + + +RIEN++ELV+A +F ED+ L AFL Sbjct: 478 SNLIQEILESTGYMKELKDSNEIEDISRIENIKELVSAAVEFENTSEDK---SLSAFLEK 534 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + D D +MTLHSAKGLEFP VF+VGME G+FP SL+ +EE RR Sbjct: 535 ITLVSDVDNYDEDTDTTVMMTLHSAKGLEFPVVFMVGMENGIFPGAQSLENFAEMEESRR 594 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA--------- 648 L YVG+TRA ++L +T A TR+++G+ V + S FI E+ E VR Sbjct: 595 LCYVGITRAKEQLYMTSASTRKVFGRSVAYSESDFINEISPNLKEMVREGRTESAVKSST 654 Query: 649 ----------------------------------TVSRPVSHQRMGTPMVENDSGYKLGQ 674 G N +G+ Sbjct: 655 VRLNSVANGATISSHSLSSFGVKKAEKTINSILSNSYTSQGSNEKGNKKDLNLDEITVGR 714 Query: 675 RVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +V H KFG GTIV+ + ++ +AF GIK L+ + A ++ + Sbjct: 715 KVSHDKFGVGTIVSATKTNNDVKVTIAFDNMGIKQLMFSMAPIKLI 760 >UniRef50_Q31JE9 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=Q31JE9_THICR Length = 741 Score = 900 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 406/741 (54%), Positives = 542/741 (73%), Gaps = 23/741 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+S++L+ LND QR+AV + L+LAGAGSGKTRVLVHRIAWL V S Y+I+AV Sbjct: 1 MDISHILNDLNDAQRDAVTVEDQHALILAGAGSGKTRVLVHRIAWLTQVMGFSAYNILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA+EMR R+ L+G GM +GTFHG+A+RLLR H+ + LPQ FQILDS+DQ Sbjct: 61 TFTNKAASEMRARVEALIGNQSQGMTMGTFHGIAYRLLRTHYKEVGLPQSFQILDSDDQK 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KRL+KA+ LD+ QWP +Q +IN +K+EG RPHHI NP + ++YQAY+E Sbjct: 121 RVIKRLLKALELDDAQWPHKQVQAFINGEKEEGRRPHHIDPGHNPYVRQMVQIYQAYEEQ 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C RAGLVDFAELLLRAHELWL P +L HY+ RF +ILVDEFQDTN++QYAW+R+LAG + Sbjct: 181 CKRAGLVDFAELLLRAHELWLKNPQVLAHYQARFRHILVDEFQDTNSLQYAWLRVLAGAS 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 G++ IVGDDDQSIYGWRGA++ENI+RF DF +T+RLEQNYRST IL AAN LI N Sbjct: 241 GRLFIVGDDDQSIYGWRGAKIENIRRFDEDFSDVKTVRLEQNYRSTGTILKAANGLIAFN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R+GK LW+ G +G+PI +Y AFNELDEAR+V N++++W + GG+ +E A+LYRSNAQS Sbjct: 301 QDRMGKNLWSAGEEGDPIRIYEAFNELDEARYVCNQVESWCEQGGSRSEVAVLYRSNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+E+ALLQA +PYR+YGG+RF++R EIKD L+YLRL+ N DDAAFERV N P RGIG+ Sbjct: 361 RVMEQALLQAQIPYRVYGGLRFYDRAEIKDVLAYLRLLVNTEDDAAFERVYNHPPRGIGN 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +T D +R+ +R ++++LWQA ++ Q+ L RA +A+ F+ LI++L TA++ L Q Sbjct: 421 KTADQIREVARMQEISLWQAATQMAQD-GLTARAKTAVNGFLSLIESLKDSTAELTLQDQ 479 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--------------------S 520 +VI SGL+ +E++ E+GQ+R+ENL+EL+ A F Sbjct: 480 VIQVISRSGLQLHFEKDTSEQGQSRLENLDELINAVSVFKPVQDNDTVEGVVPEEAAMTE 539 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 ++ PL FL+ AALEAGE QAD W+ +VQLMTLH+AKGLEFP VF++G+EEG+F Sbjct: 540 AFDQPNFENPLAEFLAQAALEAGEQQADQWESSVQLMTLHAAKGLEFPLVFMIGLEEGLF 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 PSQ S ++ RLEEERRLAYVG+TRA ++L +++A RR++G E Y PSRFI E+P++C Sbjct: 600 PSQQSQEDPYRLEEERRLAYVGITRAEKQLMISFANRRRMHGSEFYPLPSRFIKEIPDDC 659 Query: 641 VEEVRLRATVSRPVSHQRMGTPMV--ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 V+ VRL +V N+SG+++G+ V H KFGEGT++ EG+G+H+R+ Sbjct: 660 VQMVRLSGSVKHYGETASHANKGFALPNESGFRVGENVFHQKFGEGTVLGTEGAGDHARI 719 Query: 699 QVAFQGQGIKWLVAAYARLES 719 QV F G KWLVAA+A+LE Sbjct: 720 QVNFTHAGTKWLVAAFAKLEK 740 >UniRef50_A8SUE8 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=A8SUE8_9FIRM Length = 789 Score = 900 bits (2328), Expect = 0.0, Method: Composition-based stats. Identities = 285/775 (36%), Positives = 413/775 (53%), Gaps = 64/775 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 ++ LND Q++A LL+LAGAGSGKTRV+ HR+A+LM E +P +I+A+TFTNK Sbjct: 16 IMAGLNDMQQQACEHVDGPLLILAGAGSGKTRVITHRVAYLMDHEGVNPLNILAITFTNK 75 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EMR R+ ++G +WV TFH L R+LR + ++F I DS+DQ +K Sbjct: 76 AAREMRDRVDLIVGEGADRVWVSTFHSLCVRILRRYADKIGYEKNFDIYDSDDQKSTVKS 135 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACDR 183 ++K +D K++P + M I+ K++ + P + +VY YQ + Sbjct: 136 ILKDFQIDPKRYPEKMFMSEISKAKEKYMSPDEFARRNAADYAATKVAEVYTEYQGRLKK 195 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +L+ + EL+ + P +L Y+ RF I+VDE+QDTN+IQ+ +++LA + Sbjct: 196 NNAMDFDDLIYKTVELFEHNPDVLDTYQNRFRYIMVDEYQDTNHIQFLMVKMLARKYRNL 255 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA + NI F ++ A+ I+LEQNYRS NIL+AANA+I++N GR Sbjct: 256 CVVGDDDQSIYKFRGANITNILNFEKEYEDAKVIKLEQNYRSCGNILAAANAVIQHNEGR 315 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K LWTD GE IS E E V +RIKT G + AILYR+NAQSRVL Sbjct: 316 KDKALWTDQDAGEKISFDQCDTEYAEGDLVASRIKTLVRQGVGYRDIAILYRTNAQSRVL 375 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E ++ A++PYR+YGG F+ R+EIKD L+YL++I N D+ F RVVN P RGIG+ +L Sbjct: 376 GEKMVYANIPYRVYGGTNFYARKEIKDVLAYLKVINNTTDNLYFRRVVNVPKRGIGEASL 435 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPLHVQTD 482 V + L++ A + +A + + +++F LI + D L D Sbjct: 436 SKVESFADAYGLSMMDAAARADEIPGMAVKTSGKIKQFATLIQSFRDMLQDGESLDAVYD 495 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 R+++D+G + E E+ TR+EN++EL +F E+ L FL AL + Sbjct: 496 RILEDTGYESELIAEHTEESMTRLENIDELRNKVVEFVDENEE---AGLSEFLEEIALVS 552 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DEGGRLEEERRLAY 600 + V+LMTLHSAKGLEFP VFI GME+ +FPS M+L D+ LEEERRL Y Sbjct: 553 DLDSMSEDDNQVKLMTLHSAKGLEFPYVFICGMEDRVFPSGMALNSDDPDALEEERRLCY 612 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR-------- 652 VG+TRAM+KL L+ A R ++G + SRFI E+P E +++ Sbjct: 613 VGITRAMKKLYLSAARERMMHGNRISSDVSRFIREIPPLLFEHEADMRNMAKRRETESVD 672 Query: 653 -----------------------PVSHQRMGTPMVENDSGYKLG---------------- 673 P P G Sbjct: 673 RYNRGDLYSDSSYGSSYNYKPRTPGKEYGQKNPYSSYARQKSYGQPSTQPAFGKAFVVSA 732 Query: 674 ---------QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 RVRH KFG GT+ N+E + + V F G++ + A++A+L+ Sbjct: 733 SGKPDYEVGDRVRHIKFGVGTVENLEKGDKDYEVTVNFDRCGVRKMFASFAKLKK 787 >UniRef50_A4XBE9 ATP-dependent DNA helicase PcrA n=18 Tax=Actinomycetales RepID=A4XBE9_SALTO Length = 795 Score = 899 bits (2324), Expect = 0.0, Method: Composition-based stats. Identities = 291/770 (37%), Positives = 422/770 (54%), Gaps = 51/770 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN QREAV S LL++AGAGSGKTRVL HRIA+L++ P I+A+ Sbjct: 27 LDPQALLDGLNGPQREAVTHAGSPLLIVAGAGSGKTRVLTHRIAYLLAARQVHPGEIIAI 86 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ QL+G MWV TFH R+LRA H A L F I D++D Sbjct: 87 TFTNKAAGEMKERVAQLVGPRARLMWVSTFHSACVRILRAEHEHAGLKSTFSIYDADDSR 146 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQE 179 RL++ + + ++LD K++P R +++ K+E + P + P E+ + Y YQ Sbjct: 147 RLMQLVARELDLDPKRYPARGLAAQVSNLKNELVDPEEFAARAKGPNERALAEAYTLYQR 206 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +L++ L + PH+ + YR RF ++LVDE+QDTN+ QY I+ L Sbjct: 207 RLREAHALDFDDLIMTTVHLLQSHPHVAETYRRRFRHVLVDEYQDTNHAQYVLIKELVSG 266 Query: 240 T-----GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 T ++ +VGD DQSIY +RGA + NI F DF A TI LEQNYRST IL+AAN Sbjct: 267 TDGLDPAELCVVGDADQSIYAFRGATIRNILEFERDFTDARTILLEQNYRSTQTILNAAN 326 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAIL 353 A+I+ N R K+LW++ G+PI Y A E EA +V I D+G + A+ Sbjct: 327 AVIDRNTSRKPKRLWSEAGTGDPIVGYVADTEHTEADWVAREIDRLVDDGDTRPGDVAVF 386 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRV EE ++ +PY++ GG+RF+ER+E++DAL+YLR + N +D + RV+NT Sbjct: 387 YRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDALAYLRALVNEDDTVSLRRVLNT 446 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIGDR V + +++ A R ++ RAA+ + F+ L+D + + Sbjct: 447 PRRGIGDRAEACVEALASRDRISFGAALRRARDAPGISTRAANGIAEFVALLDGVREVAE 506 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN----EEDEDLM 529 + ++ SG T E+ + R++NL+ELV+ R+++ E+ + Sbjct: 507 TSAPEEVLEALLNRSGYLTELEESLDPQDAGRVDNLQELVSVAREYTERVEGLGEEGERA 566 Query: 530 PLQAFLSHAALEAGEGQ----ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 + FL AL A Q Q V LMTLH+AKGLEFP VF+ GME+G+FP + Sbjct: 567 TVAGFLEQVALVADADQLPADDPEHQGVVTLMTLHTAKGLEFPVVFLTGMEDGVFPHART 626 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 + LEEERRLAYVG+TRA Q+L L+ A TR +G+ Y+ PSRF+ ELP E V R Sbjct: 627 FGDNHELEEERRLAYVGITRARQRLYLSRAVTRSAWGQPAYNAPSRFLEELPAELVRWER 686 Query: 646 LRATVSRPV-----------------------------------SHQRMGTPMVENDSGY 670 + + S + + Sbjct: 687 TEGSYTSWAGGGGGVGGRADRGQGGFTGGTPKAAQLARRLGVDGSRLATASELPSAPPRV 746 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G RV H ++G G ++ +EG G +R Q+ F Q + WLV +A ++ + Sbjct: 747 AVGDRVNHQRYGLGRVLTVEGHGPGARAQIDFGDQTL-WLVLRHAPIDRL 795 >UniRef50_B8I5U1 ATP-dependent DNA helicase PcrA n=14 Tax=Firmicutes RepID=B8I5U1_CLOCE Length = 785 Score = 897 bits (2318), Expect = 0.0, Method: Composition-based stats. Identities = 286/706 (40%), Positives = 402/706 (56%), Gaps = 12/706 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LL+ LN +Q+EAV LL+LAGAGSGKTRVL HRIA+L+ P +I+A+TFTN Sbjct: 2 DLLNGLNKEQKEAVLHNEGPLLILAGAGSGKTRVLTHRIAYLIEQHGIYPSNILAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ RI L+G MWVGTFH + R+LR + F I D++DQ ++K Sbjct: 62 KAAREMKERIAGLIGDLSNDMWVGTFHSICIRILRRDIEKLGYDRSFVIYDTQDQQVVIK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACD 182 IK ++++EK +PP+ + I QKDE + H + + K+Y+ Y++ Sbjct: 122 ECIKELSINEKNFPPKSVLETIGKQKDELIDAVHYEKLYASDFRMGKIAKIYKLYEKKLK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF ++++ +L+ P +L +Y+ RF ILVDE+QDTN QY +R L+ Sbjct: 182 ANNALDFDDIIMNTIKLFDKYPEVLDYYQRRFRYILVDEYQDTNTAQYTLVRKLSEAQEN 241 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIYGWRGA + NI F DF TI+LEQNYRST NIL AAN +I NN G Sbjct: 242 LCVVGDDDQSIYGWRGANIRNILDFEKDFKKCCTIKLEQNYRSTQNILDAANHVIGNNTG 301 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 R K LWTD G I + NE +EA + I+ D + A+LYR NAQSR Sbjct: 302 RKCKSLWTDNKGGSKIVICENDNEHEEALYAAREIQRLIFDEDRKYKDFAVLYRINAQSR 361 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEE ++ +PY+I GG +F++R+EIKD ++Y+RL+ N D+ + +RV+N P RGIGD Sbjct: 362 VLEEMFMREGIPYKIVGGQKFYDRKEIKDIIAYMRLVQNPGDNVSLKRVINVPKRGIGDT 421 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + ++L+ + +L RAA L F +I+ M + Sbjct: 422 TVENAEILAYQGDVSLFTVISNAEEFPSL-KRAAQKLGNFSLMINKFRTMKEHMTISQML 480 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D V++DSG+ YE E + Q+RIEN++EL + +F ED L+ FL+H +L Sbjct: 481 DMVVEDSGILREYELENTVEAQSRIENIKELKSVAIEFEKQSED---NSLEEFLAHISLV 537 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE-GGRLEEERRLAY 600 + QD V LMT+HSAKGLEFP VFI GMEEG+FP ++ E +LEEERRL Y Sbjct: 538 SDIDSLQEDQDYVVLMTMHSAKGLEFPVVFIPGMEEGVFPGYRAITEGPEQLEEERRLCY 597 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRA +KL L+ A R L+G Y+RPSRF+ E+PEE VE + +R S Sbjct: 598 VGITRAREKLYLSNARFRTLFGNSSYNRPSRFLAEIPEELVEYPFKSTSHTRNTSQNSGS 657 Query: 661 TPMVENDSGYKLGQRVRHAKF-GEGTIVNMEGSGEHSRLQVAFQGQ 705 D + V G G++ ++ S + F G Sbjct: 658 AFKQSGDRIPRTNPAVASGTPTGSGSLKDLLNSN---LVTRGFGGS 700 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 39/79 (49%) Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 + + + S + + + ++ + +G +V H KFG+GTI + L++ Sbjct: 707 KNPSGQQSNSFGRTPMKSSSGASDSSVAFSVGDKVEHKKFGKGTISKVTADSNDQILEIQ 766 Query: 702 FQGQGIKWLVAAYARLESV 720 F+G G+K L+A+ A L + Sbjct: 767 FEGAGMKRLMASMANLVRL 785 >UniRef50_C7QGW9 ATP-dependent DNA helicase PcrA n=8 Tax=Bacteria RepID=C7QGW9_CATAD Length = 806 Score = 896 bits (2316), Expect = 0.0, Method: Composition-based stats. Identities = 294/752 (39%), Positives = 416/752 (55%), Gaps = 40/752 (5%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN+ QREAV LL++AGAGSGKTRVL HRIA+L+ + P SI+A+TFTN Sbjct: 59 KLLDGLNEPQREAVLHAGGPLLIIAGAGSGKTRVLAHRIAYLVGERHAHPGSILAITFTN 118 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAAAEMR R+ +L+G MWV TFH R+LRA A LP +F I D+ D RL+ Sbjct: 119 KAAAEMRQRVEELVGPRARLMWVSTFHSACVRILRAQAKTAGLPSNFSIYDTADSQRLMT 178 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDR 183 +++ + +D K+ PR + I+ K+E + S E+ +VY+ Y + Sbjct: 179 MVLRDLEIDPKKTTPRSMLGQISKLKNELVDHDTFSSRAQTEAERQLAQVYRLYADRLTA 238 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT--- 240 A +DF ++++ L P I +HYR RF NILVDE+QDTN QY ++ L G Sbjct: 239 AKALDFDDIIMTTVHLLQAFPMIAEHYRRRFRNILVDEYQDTNTAQYQLVKELVGQHEKR 298 Query: 241 ------------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQN 282 ++ +VGD DQSIY +RGA + NI F D+P A+ I+LEQN Sbjct: 299 TVDGDLVRPGLNTEDLPPAELCVVGDADQSIYAFRGATIRNIIEFERDYPDAKVIKLEQN 358 Query: 283 YRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD 342 YRST IL+AANA+IENN GR K LWTD DG+ I+ Y A +E EA+FV I D Sbjct: 359 YRSTQTILTAANAVIENNKGRRAKNLWTDSGDGKLITGYVADDEHSEAQFVAEEIDRLSD 418 Query: 343 NG-GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANR 401 A+ YR+NAQSRV EE ++ +PYR+ GG+RF+ER+E++DAL+YLR +AN Sbjct: 419 AKETTYGGVAVFYRTNAQSRVFEEVFVRVGLPYRVVGGVRFYERKEVRDALAYLRALANE 478 Query: 402 NDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRF 461 +D + RV+NTP RGIG++ + + + S ++T A R + LA R+ A+Q F Sbjct: 479 DDIVSVRRVLNTPKRGIGEKAEESLERLSARERITFGDALRRADEAPGLAARSVKAVQGF 538 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 +++D L + A+ + +++ +GL + + +TRIENL EL+ +F Sbjct: 539 TQMMDELREMAAEYGPAHVLEAILERTGLLQELQDSDDPQDETRIENLRELLAVALEFEQ 598 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDA---VQLMTLHSAKGLEFPQVFIVGMEEG 578 + + L FL AL A Q +D V LMTLHSAKGLEFP VF+ GME+G Sbjct: 599 GQPEG---RLPEFLERVALVADSDQIPDGEDHEGMVTLMTLHSAKGLEFPVVFLTGMEDG 655 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +FP S+ + +EEERRLAYVG+TRA ++L ++ + R +G Y+ PS+F+GE+PE Sbjct: 656 VFPHMRSMGDKKEMEEERRLAYVGITRAREQLYVSRSVYRSAWGAPQYNPPSKFLGEIPE 715 Query: 639 ECVEEVRLRATVS----------RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVN 688 VE R R S G RV H FG GT+V Sbjct: 716 PLVEWERTAPEPKTGERSPFGDRRGTSRGFQQRKGAVKVISLDPGDRVIHDSFGMGTVVA 775 Query: 689 MEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G + F G++ L+ A ++ + Sbjct: 776 VSGRERD-EATIDFGSSGVRTLLLTMAPVQKL 806 >UniRef50_A7VTM6 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTM6_9CLOT Length = 740 Score = 892 bits (2306), Expect = 0.0, Method: Composition-based stats. Identities = 278/744 (37%), Positives = 417/744 (56%), Gaps = 29/744 (3%) Query: 1 MD-VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M + L +N +Q EAV LL+LAGAGSGKT VL++RIA+++ P+ I+A Sbjct: 1 MSTMQEKLKKMNPRQLEAVLHTEGPLLILAGAGSGKTTVLINRIAYIIDQSLAKPWQILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +TFTNKAA E++ R+ ++G + G +W TFH R+LR F + D++D Sbjct: 61 ITFTNKAAGELKERLTAMLGDTGGDVWAATFHSTCARILRRDGDRIGYSSHFTVYDTDDS 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAY 177 RL+K KA+N+D+K + + I+ KD L P Q+ + VY+ Y Sbjct: 121 KRLVKDCQKALNIDDKMISHKSILSEISHAKDSMLSPADYQAAAGSDFRLAKIGAVYELY 180 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ A +DF +LL EL+ P +L++Y+ RF I+VDE+QDTN +QY ++RLLA Sbjct: 181 QKRLREADAMDFDDLLGNTVELFRQCPDVLEYYQNRFRYIMVDEYQDTNQVQYEFVRLLA 240 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + +VGDDDQSIY +RGA +ENI F +P A+ IRLEQNYRST NIL+AANA+I Sbjct: 241 EKSKNLCVVGDDDQSIYKFRGATIENIMSFEKSYPNAKVIRLEQNYRSTKNILNAANAVI 300 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN R GK LWT+ +G+ I ++ + NE DEA FV I G ++ A+LYR N Sbjct: 301 SNNEERKGKTLWTENPEGDKIQIHTSSNEQDEAGFVATTILEQVAKGRKYSDFAVLYRMN 360 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +QS +LE+ +++ +PYRI GG RF+ER+EI+D ++YL +I N +D+ R+VN P R Sbjct: 361 SQSNILEKVFVKSGIPYRIIGGHRFYERREIRDMIAYLSVINNPSDEIRLRRIVNQPKRS 420 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-- 475 IGD+T+ + + +L + + +L RA+ L+ F +++ L D Sbjct: 421 IGDKTIATASEIAGALGESLLEVLGRADEFDSLR-RASVKLKAFYDMMQELIDANDDESV 479 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 LH + +++ +G E E+ +TRIEN+ EL + +F EE+ + L AFL Sbjct: 480 SLHELYELILEKTGYIEALRGE-KEEAETRIENINELASNLLKF--QEENGEEATLSAFL 536 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +L D D V +MT+HSAKGLEFP VF+ G EEG+FP ++ + ++EE Sbjct: 537 EEVSLMTDIDNYDETADTVVMMTMHSAKGLEFPVVFLPGFEEGIFPGLQAIYDPNEIQEE 596 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP-- 653 RRL YV +TRA + L L A++R L+G +RPSRF E+P + + + R + Sbjct: 597 RRLCYVAITRAKESLYLLNADSRMLFGSTSRNRPSRFSLEIPLDLINKTREQDWRKPDLG 656 Query: 654 -----------------VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 H TP + + +K G V+H FG+G +++ G Sbjct: 657 TKMPVAETELRRKSATAAMHFGQVTPPARSGNVFKTGDMVQHKTFGKGLVISATPMGNDV 716 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 L++AF+ G K L+A +ARL V Sbjct: 717 LLEIAFEQ-GTKKLMANFARLAKV 739 >UniRef50_Q0TN58 ATP-dependent DNA helicase PcrA n=12 Tax=Clostridium RepID=Q0TN58_CLOP1 Length = 751 Score = 892 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 275/757 (36%), Positives = 423/757 (55%), Gaps = 43/757 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ L LN +Q EA +L+LAGAGSGKTRVL HRIA+++ + PY+I+A+ Sbjct: 1 MDLKSL---LNKEQYEAATTIDGQVLILAGAGSGKTRVLTHRIAYMIEN-DIKPYNILAI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G MW+ TFH R+LR +DF I DS DQ Sbjct: 57 TFTNKAAGEMRERVKSLVGEVANNMWISTFHSSCVRILRREIDKLGYSKDFTIYDSSDQK 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQ 178 L+K ++K +N++EK+ + + I KD + + Y YQ Sbjct: 117 TLIKLVMKELNINEKEITDLEILGTIGKAKDNIQSAQSFKKENEDNFRKNKIADAYLLYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF +L+++ EL+ +L+ Y+ +F I++DE+QDTN QY + +LLA Sbjct: 177 KKLKENNALDFDDLIVKTVELFRKHNDVLEFYQNKFKYIMIDEYQDTNKAQYEFAKLLAA 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA + NI F D+P A+ ++LEQNYRS NIL AAN +I+ Sbjct: 237 KHKNICVVGDDDQCIYAWRGADIRNILDFEKDYPEAKVVKLEQNYRSKGNILEAANKVIK 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN R K L T+ +GE IS++ A+++ EA FVV+ I+ + DNG + A+LYR+N Sbjct: 297 NNAERKFKILRTEQVEGEKISIHRAYSDKMEAAFVVSEIEKLKNDNGYKYKDFAVLYRTN 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR EEAL +A +PYRI+GG++F++R+EIKD L+YL++I N D + R++N P R Sbjct: 357 AQSRNFEEALRRAGIPYRIFGGLKFYDRKEIKDILAYLKIIVNPKDSISLRRIINVPKRS 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGD T++ ++ + + TL+ ++ L R+ + +++F ++++ + + + + Sbjct: 417 IGDTTVEKLQNHATEIDDTLYNVLLDVDYVPGLTARSINPIKKFTDMMEEIMVMSEQLSV 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + V++ +G + K + Q+RIENLEELV+ +F + E++ L A+L Sbjct: 477 SQLIEYVLEKTGYLKSLKDSKLIEDQSRIENLEELVSDAVEFEKSNEEDK--SLSAYLEK 534 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + + V LMT+HS+KGLEFP VF+VGME G+FP+ + ++EE RR Sbjct: 535 VALVQDMDDLEAEDNYVMLMTVHSSKGLEFPTVFLVGMENGIFPNAACFEHDNQMEEARR 594 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA +KL +T AETR ++GK V + S FI E+P + V + S Sbjct: 595 LCYVGITRAEEKLYMTSAETRMIFGKTVAYGQSDFISEIPANIKDYVNINGKSSSNSFKN 654 Query: 658 RMGTPMVENDSGY----------------------------------KLGQRVRHAKFGE 683 T + +G++V+H KFG Sbjct: 655 SSQTYGETRKTYNPHSIRGGMSASKANESLNKTLSGKSSGNAGIDELTMGRKVKHPKFGV 714 Query: 684 GTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 GT++ G+ +L +AF QG+K L+ ++A LE + Sbjct: 715 GTLITKSKVGDDYKLTIAFDSQGVKHLMFSFAPLELL 751 >UniRef50_Q6MI36 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MI36_BDEBA Length = 762 Score = 891 bits (2303), Expect = 0.0, Method: Composition-based stats. Identities = 290/764 (37%), Positives = 436/764 (57%), Gaps = 46/764 (6%) Query: 1 MD-VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD + ++ +LN Q++AV LL+LAGAGSGKTRVL HR+A ++ + I+ Sbjct: 1 MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQGVAASDEILC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQG----GMWVGTFHGLAHRLLRAHHMDANLPQDFQILD 115 VTFTNKAA EM HRI +++ +W+ TFH R+LR H + F I D Sbjct: 61 VTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCVRVLRQHITLLDYKPFFGIYD 120 Query: 116 SEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVY 174 S DQL +K+++ A+++++K +P + I+S K GL P ++ + +Q +VY Sbjct: 121 SSDQLSQIKKVMTALDINDKMYPAKNFQSRISSAKMMGLSPEGLEKSSKRLMDQKTVEVY 180 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 +AY+ +A +DF +LLL+ ++L+ P +LQ Y+++F I+VDE+QDTN+IQY ++ Sbjct: 181 KAYEREMKKANSLDFDDLLLKTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQ 240 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 +LA + +VGD+DQSIY WRGA ++NI F DF A+ I+LE+NYRS++NI++ A Sbjct: 241 MLASAHRNLCVVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT 300 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAIL 353 A+I+NN+ R K L+T G+ I + NE +E RFV I++ + G G+ + AI Sbjct: 301 AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEGEGSYNDYAIF 360 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+NAQSRVLEE L +PYR+ GG+RF+ER EIKD +SYL+L N DD A +R++N Sbjct: 361 YRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMISYLKLSINPADDIALKRIINV 420 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG T++ + + + + L++++A + +E+ ++RF++L+ L Q Sbjct: 421 PARGIGKTTIEKIEEYAAHKNLSMFEAAEKACEERLFNAGTTGKIRRFIDLMKDLQQNAQ 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + L V+ + ++++ + Q RIENLEEL A QF +E + L + Sbjct: 481 HLKLLEFFAVVLDRTEYLAALKKDESPESQARIENLEELDNAIAQFV--QERGEESTLIS 538 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS--LDEGGR 591 FL AL D Q++V +MTLH +KGLE+P VF+VG+EE +FPS S D Sbjct: 539 FLEEMALVNDVDSLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQD 598 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV---------- 641 +EEERRLAYVG+TRA QKL LTYA+ RR++G+E ++ PSRFI E+P+ + Sbjct: 599 VEEERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDFKTSAEAPR 658 Query: 642 -------------------------EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRV 676 + R R + + G RV Sbjct: 659 FMARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFPDYENDGAGSAPFSKGMRV 718 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RH FG GT+ EG+GE+ ++ V F +K V YARLE V Sbjct: 719 RHPTFGVGTVYATEGTGENFKVSVMFTDNTVKKFVVKYARLERV 762 >UniRef50_A1WZS5 ATP-dependent DNA helicase UvrD n=3 Tax=Gammaproteobacteria RepID=A1WZS5_HALHL Length = 725 Score = 890 bits (2302), Expect = 0.0, Method: Composition-based stats. Identities = 416/727 (57%), Positives = 530/727 (72%), Gaps = 13/727 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L LND QREAV P LVLAGAGSGKTRVL R A+L+ VE SP++I+AV Sbjct: 1 MPIDALTADLNDAQREAVCLPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RIG+L+G + GMWVGTFHG+AHRLLR H A LP+ FQILD++DQL Sbjct: 61 TFTNKAAGEMRGRIGELLGIATAGMWVGTFHGIAHRLLRQHAQRAGLPEGFQILDADDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 R++KR+++A DE ++PPRQ +I+++K+EG RP + G +Q VY Y++A Sbjct: 121 RVVKRVLRARGNDESRFPPRQVRGFISARKEEGERPSDVTEAGGDYQQELLAVYHDYEQA 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 C R GLVDF+ELLLRA+EL + P +L HY+ RF +ILVDEFQDTN +QY W++LL G+ Sbjct: 181 CRRGGLVDFSELLLRAYELLRDDPELLGHYQRRFAHILVDEFQDTNALQYRWLKLLGGEQ 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGA+VENI+ F + +RLEQNYRST IL AAN LIE+N Sbjct: 241 SELFVVGDDDQSIYGWRGARVENIEHFRREMGDVRVVRLEQNYRSTGTILDAANRLIEHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQ 359 +GRLGK+LWTDG GEPI+LY AFNE+DEAR+VV+RI+ + G A+ AILYRSNAQ Sbjct: 301 SGRLGKQLWTDGWSGEPITLYAAFNEVDEARWVVDRIRQLSEEGGYGHADFAILYRSNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE L A +P+R+YGG+RFFER E+KDAL+YLRL+ANR+DDA+FERVVNTP RGIG Sbjct: 361 SRALEHELHAARLPFRVYGGLRFFERAEVKDALAYLRLVANRHDDASFERVVNTPPRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 +T+D VR +R+ +++W+A REL +ALA RA +AL F+E IDAL E D PLH Sbjct: 421 AKTVDAVRYAAREADVSMWRAARELTGSRALAARARNALASFLERIDALDSELTDRPLHD 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMPLQAFLSHA 538 Q ++VI + LR +E+++ R+ENL+ELVTA R F+ +E ++DL PL AFL+HA Sbjct: 481 QVEQVIARTDLRRHHERDE-----ARLENLDELVTAARTFAQRDEPEDDLDPLAAFLTHA 535 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 ALEAGEGQAD W+ +VQLMTLHSAKGLEFP VF+VGMEEG+FP +MS++E GRLEEERRL Sbjct: 536 ALEAGEGQADDWEHSVQLMTLHSAKGLEFPVVFLVGMEEGLFPHRMSVEEPGRLEEERRL 595 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS--- 655 YVG+TRA Q+L LT+AE RRL+G + RPSRF+ E+P E +EEVR R +V R Sbjct: 596 CYVGMTRARQRLILTHAEKRRLHGMDQLARPSRFLTEIPGEHLEEVRPRMSVRRGPPSVP 655 Query: 656 ---HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 P G LG RV H +FG+G +++ EGSG ++RLQV F G KWL+A Sbjct: 656 ASGGSGSSLPADAPPEGLSLGSRVHHPRFGDGVLLHCEGSGPNARLQVRFDSAGTKWLIA 715 Query: 713 AYARLES 719 A LE Sbjct: 716 GRAGLEP 722 >UniRef50_A9WKU6 DNA helicase II n=2 Tax=Bacteria RepID=A9WKU6_RENSM Length = 797 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 296/775 (38%), Positives = 415/775 (53%), Gaps = 61/775 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LL LN +Q AV S LL++AGAGSGKTRVL HRIA+L++ P I+A+T Sbjct: 26 DAKELLHGLNPEQEAAVTHAGSPLLIVAGAGSGKTRVLSHRIAYLLATGRAHPGQILAIT 85 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI L+G + MW+ TFH R+LR L F I DS D LR Sbjct: 86 FTNKAAAEMRERIAALIGDAAKNMWISTFHSSCVRILRREASTVGLNSSFSIYDSADSLR 145 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+ + + ++LD K++ P+ I++ K+E + + +P EQ +VY+ Y + Sbjct: 146 LITLIARGLDLDPKRFAPKAMQHKISALKNELIDDDAFAATATDPFEQGVAEVYRGYTQR 205 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +A +DF +L+ + L+ P + +YR RF +++VDE+QDTN+ QYA ++ + G Sbjct: 206 LRQANALDFDDLIAQTVWLFRAFPGVADYYRRRFRHVMVDEYQDTNHAQYALVKEIVGPA 265 Query: 241 -------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 ++ +VGD DQSIY +RGA + NI F D+P A TI+LEQNYRST ILSAA Sbjct: 266 EGSGDEPAELTVVGDSDQSIYAFRGADIRNIVEFEKDYPNARTIKLEQNYRSTQTILSAA 325 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAI 352 NA+IE N R K+LWT DGE I Y A NE +EARF+ I QD + AI Sbjct: 326 NAVIEKNPDRPVKRLWTAEGDGEKIIGYVAENEHEEARFIAEEIDRLQDEADFRPGDVAI 385 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 YR+NAQSR +EE L++ +PYR+ GG RF+ER+EIKDAL+YLR++ N DD R++N Sbjct: 386 FYRTNAQSRSIEEILMRVGLPYRVVGGTRFYERKEIKDALAYLRVLVNPEDDVNLRRILN 445 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 P RGIGDR V + + + A R A+A R+ +A+ F++LID L + Sbjct: 446 EPKRGIGDRAEGAVAALAERERSSFMAALRHAEDAPAIATRSLNAVNGFVKLIDDLTEVA 505 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + + V++ +G + ++R+ENL ELV R++ ++ + L Sbjct: 506 STSGAATALEAVLEQTGYLETLRASSDPQDESRVENLAELVAVVREYERDKPEG---SLT 562 Query: 533 AFLSHAALEAGEGQADTWQDA--------------VQLMTLHSAKGLEFPQVFIVGMEEG 578 FL AL A Q + V LMTLH+AKGLEFP VF+ GME G Sbjct: 563 DFLEGVALVADADQIPDAPGSDTEAAVAEARRLGVVTLMTLHTAKGLEFPAVFLTGMEHG 622 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +FP S + L EERRLAYVG+TRA ++L LT AE R L+G+ Y+ S FI E+P Sbjct: 623 IFPQARSATDAKELAEERRLAYVGLTRARKRLYLTRAEVRSLWGQSQYNPASPFIDEVPA 682 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVENDSGY---------------------------- 670 +E R + + P + S + Sbjct: 683 NLIEWKREGMSRAIPSIGSSGFGRDRYSGSHWGAGSAVGGRDAGQLPPSLATRSARVQPQ 742 Query: 671 ------KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +G +V H FG GT+V +EGSG+ + +V F K L+ YA L Sbjct: 743 KEIPQLSVGDKVEHTSFGAGTVVALEGSGDKTVAKVRFA-AEEKRLLLRYAPLTK 796 >UniRef50_C5C915 ATP-dependent DNA helicase PcrA n=7 Tax=Actinomycetales RepID=C5C915_MICLC Length = 858 Score = 885 bits (2287), Expect = 0.0, Method: Composition-based stats. Identities = 306/798 (38%), Positives = 417/798 (52%), Gaps = 82/798 (10%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 L++ LN +Q AV + LL++AGAGSGKTRVL HRIAWL++ P+ I+A+T Sbjct: 62 TPDSLVEGLNPQQSAAVTHTGAPLLIVAGAGSGKTRVLTHRIAWLLATGRARPHEILAIT 121 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR R+ L+G + MW+ TFH A RLLR + L F I DS D LR Sbjct: 122 FTNKAAAEMRERVAGLIGPTAQRMWISTFHSSAVRLLRNEAANIGLKSTFTIYDSADSLR 181 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQ 178 L+ + K LD K++ P+ + I+S K+E + + G+P + VY+ Y Sbjct: 182 LVTTVAKQHELDPKRFAPKALLNRISSLKNELVEADDYAATVAEGDPWGRAVAAVYRDYT 241 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A +DF +L+ ++ P +L +YR RF ++LVDE+QDTN+ QY IRLLAG Sbjct: 242 ARLRQANALDFDDLIGMTVHMFEAFPRVLDNYRRRFRHVLVDEYQDTNHAQYRLIRLLAG 301 Query: 239 ----------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSN 288 G++ +VGD DQSIY +RGA + NI F DF A TI+LEQNYRST Sbjct: 302 PAGDPEGVETPGGELTVVGDSDQSIYAFRGADIRNIVEFEQDFTDAVTIKLEQNYRSTQT 361 Query: 289 ILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGAL 347 IL AANA+IE N R K+LWT +G I Y A NE EA ++ I QD G Sbjct: 362 ILDAANAVIERNPDRRPKRLWTAEGEGPAIVGYAAENESAEAEWIAATIDRLQDEDGIRP 421 Query: 348 AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 ++ A+ YR+NAQSR LEE L+ +PYR+ GG RF++R+EIKDAL+YLR+I N +DD Sbjct: 422 SDVAVFYRTNAQSRALEERLVTRGIPYRVIGGTRFYDRKEIKDALAYLRVIVNPDDDVNV 481 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDA 467 R++N P RGIGDR V ++ + T A R+ LA R+ A+ F++++D Sbjct: 482 RRILNEPKRGIGDRAEGAVAAWAQRNRSTFSAALRDAEHAPGLAARSLKAVNGFVQMMDD 541 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 LAQ + V++ SG+ + + + ++R +NL ELV R F D Sbjct: 542 LAQVAETAGPATVLEAVLEQSGMLAALRESEDLQDESRADNLGELVAVVRSFEKTTPDGT 601 Query: 528 LMPLQAFLSHAALEAGEGQADTWQD-----------AVQLMTLHSAKGLEFPQVFIVGME 576 L FL AL A Q T D V LMTLH+AKGLEFP VF+ GME Sbjct: 602 ---LSDFLEQVALVADADQLPTAPDVEGEALAEAQGQVTLMTLHTAKGLEFPVVFLTGME 658 Query: 577 EGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 G+FP S+ + L EERRLAYVG+TRA ++L LT AE R L+G+ ++ PS+F+GE+ Sbjct: 659 HGVFPHARSMTDEKELAEERRLAYVGLTRARRRLFLTRAEARSLWGQHQFNPPSQFLGEI 718 Query: 637 PEECVEEVRL---------------------------RATVSRPVSHQRMGTPMVENDSG 669 PE ++ R A SR + D Sbjct: 719 PEALIDWEREGTTRSAGSLSLTGAGTSRYAGRFGGGRPAWRSRDDDDGARPQRLTRGDEP 778 Query: 670 Y--------------------------KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 G RV HA FGEG + + G+G+ + V F Sbjct: 779 ADLTVPSAVVRGKAPSRVQPQKEIVALSPGDRVSHATFGEGRVDAVAGAGDKTVATVTFD 838 Query: 704 GQG-IKWLVAAYARLESV 720 G K L+ YA L V Sbjct: 839 ATGAQKRLLLRYAPLTKV 856 >UniRef50_C9XK50 ATP-dependent DNA helicase n=5 Tax=Clostridium RepID=C9XK50_CLODC Length = 762 Score = 884 bits (2285), Expect = 0.0, Method: Composition-based stats. Identities = 277/754 (36%), Positives = 414/754 (54%), Gaps = 48/754 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LN QREAV +L+LAGAGSGKT+VL RIA+L+ + +I+A+TFTNKA Sbjct: 11 LDTLNPAQREAVEKTEGPVLILAGAGSGKTKVLTTRIAYLIEDKGVQAPNILAITFTNKA 70 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R+ Q +G MW+ TFH R+LR + F I DS DQ+ L+K Sbjct: 71 ANEMRERVEQNIGPETKDMWISTFHSCCVRILRKDINKIGYNRSFVIYDSADQVTLVKDC 130 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ--TWQKVYQAYQEACDRA 184 +K +NL +K + P+ + I+ KD+ P + + +Y YQ+ R Sbjct: 131 LKELNLSDKVFEPKAVISAISGAKDKLYTPKQFKDINMADNRMVKIADIYALYQDRLKRN 190 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L+ EL+ +L +YR RF I+VDE+QDT+ QY I+LLA + + Sbjct: 191 SALDFDDLILKTVELFKANDEVLAYYRSRFRYIMVDEYQDTSKAQYELIKLLAREHQNIC 250 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA + NI F D+ ++LEQNYRST IL AAN +I NN R Sbjct: 251 VVGDDDQSIYGWRGADIRNILEFEKDYDNVHVVKLEQNYRSTQVILDAANKVISNNIERK 310 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 KKLW++ +GE I + +E++EA F+ + I + + A+LYR+NAQ+R + Sbjct: 311 RKKLWSEKKEGELIKIQLTGSEIEEADFIADSIAQIARKENRPYKDFAVLYRANAQARPV 370 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+AL ++ +PY IYGG +F+ER+EIKD L+YLR+I N DD + +R++N P RGIG RT+ Sbjct: 371 EDALNRSQIPYNIYGGTKFYERKEIKDLLAYLRVIQNPQDDISIKRIINVPRRGIGLRTI 430 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + +Q +++ ++ ++ +A +++ F+++I L P+ ++ Sbjct: 431 EKIEDRANLKQESIYSVLIDIETNSDISTKARASISGFVDIIGTLRTIKEVYPVSKLIEK 490 Query: 484 VIKDSGLRTMYEQ----------EKGEKGQTRIENLEELVTATRQFSYNEEDEDLM-PLQ 532 V+ +G + KGE+ Q RI+NL E ++ +F + +D L+ Sbjct: 491 VLDTTGYMDELVEIRNKNEKDLTGKGEEAQDRIDNLREFISIALEFESSNDDTYENKDLE 550 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD--EGG 590 FL+ AL E + D V LMT+H++KGLEFP VF+ GMEEG+FP ++ Sbjct: 551 TFLTSIAL-TSESNDEEDNDRVSLMTIHTSKGLEFPVVFLTGMEEGLFPISRAIKSMSDS 609 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 ++EEERRL YVG+TRA ++L ++ E R LYGK SRF+ ELPEEC+E + Sbjct: 610 QIEEERRLCYVGITRAKEELYMSLTEKRTLYGKTNVAIASRFMEELPEECIERLYKVKKE 669 Query: 651 SRPVSHQR---------------------------MGTPMVENDSGYKLGQRVRHAKFGE 683 + N KLG +V H KFG Sbjct: 670 LSYSKASYNMLDKYTKKYMSTISKSKVADKVNATIKDSNKETNPDDIKLGSKVHHPKFGV 729 Query: 684 GTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 GT+V++ G+ + +AF QGIK + Y L Sbjct: 730 GTVVSIIGTD----VTIAFDQQGIKKINKEYTTL 759 >UniRef50_C0VSX9 ATP-dependent DNA helicase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VSX9_9CORY Length = 735 Score = 882 bits (2280), Expect = 0.0, Method: Composition-based stats. Identities = 283/744 (38%), Positives = 411/744 (55%), Gaps = 33/744 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L+ LN +QR+AV S LL++AGAGSGKT VL RIA L+ + P+ I+A+ Sbjct: 1 MAPTDLVSDLNPQQRDAVLHDDSPLLIVAGAGSGKTAVLTRRIAHLLRFKGVQPWQILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQ 119 TFTNKAA EM+ R+ L+G M V TFH R+LR + L +F I DS+D Sbjct: 61 TFTNKAAKEMQERVIGLIGPEAQNMAVATFHSTCVRILRRNAQLVPGLNSNFTIYDSDDS 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 RLL+++ K M+LD K++ PR I+ K+E + + +VY YQE Sbjct: 121 KRLLQQIAKDMDLDIKKFSPRVLGNKISGWKNELIGVDD----AVKEHKVIGQVYGFYQE 176 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 RA +DF +L+ ++ P + +YR RF ++LVDE+QDTN+ QY +I L G Sbjct: 177 RLRRANALDFDDLIGEVVRIFREHPDVTAYYRRRFRHVLVDEYQDTNHAQYEFISALVGK 236 Query: 240 TGK-VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 G + +VGD DQSIY +RGA + NI+ F DFP A TI LEQNYRST NILSAANA+I Sbjct: 237 DGTGLCVVGDADQSIYAFRGATIRNIREFERDFPNATTILLEQNYRSTQNILSAANAVIS 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 +N R K LWTD G I Y A E DEARF+ + I D E A++YR+NA Sbjct: 297 HNEHRGKKNLWTDQGAGPKIIGYVADREEDEARFIASTID---DRNLPYNEVAVMYRTNA 353 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SRV+E+ ++ +PYR+ GG RF+ER+E++D ++YLR++ N +D+ + R+VNTP RGI Sbjct: 354 ASRVIEDVFIRTGIPYRVVGGTRFYERKEVRDIIAYLRVVDNPDDEVSLRRIVNTPRRGI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD+ L V + ++L++A R + + L R +A+ +F+ +++ L T + + Sbjct: 414 GDKALAFVTAFASRENISLYEAMRHVDEVDYLGARGRNAIAKFVAMMEELRAGTQE--VG 471 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMPLQAFLSH 537 + + SG R E+ K + + R++NL ELV R F+ +++ +QAFL Sbjct: 472 DLINLITDVSGYRDELEKSKDPRDEARLDNLNELVAYARDFAQQARANDEDDSVQAFLER 531 Query: 538 AALEAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L A Q D Q V LMTLH+AKGLEFP VF+ G EEG FP SL +EEER Sbjct: 532 VSLVADADQIPDAGQGVVTLMTLHTAKGLEFPYVFLPGWEEGQFPHMRSLGNTEEIEEER 591 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT------- 649 RLAYVG+TRA ++L ++ A R +G + SRF+G++P +E R Sbjct: 592 RLAYVGITRARKQLFISRALLRIAWGNPQTNPESRFLGDIPSSLIEWEREEPAYGVGGGY 651 Query: 650 ------------VSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 R + + +G V H K+G GT+ + G G+H+ Sbjct: 652 SSYGGNDGWIGGPRRVKKKPASSQSVPASSLKLAVGDMVNHEKYGVGTVREVSGIGKHTT 711 Query: 698 LQVAFQGQGIKWLVA-AYARLESV 720 + + F G L+ +E + Sbjct: 712 VTIDFGSHGTIRLMLIGNIPMEKL 735 >UniRef50_Q2S550 ATP-dependent DNA helicase pcrA n=2 Tax=Rhodothermaceae RepID=Q2S550_SALRD Length = 786 Score = 882 bits (2279), Expect = 0.0, Method: Composition-based stats. Identities = 287/766 (37%), Positives = 421/766 (54%), Gaps = 52/766 (6%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +LD LNDKQREAV ++++AG GSGKTR L HRIA+L++ P I+A+TFT Sbjct: 23 QRILDGLNDKQREAVTTTEGPVMIIAGPGSGKTRALTHRIAYLLAAGKAQPRDILALTFT 82 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ L+G GMWVGTFH RLLR +DF I D+ D RL+ Sbjct: 83 NKAANEMQERVEALVGDDARGMWVGTFHSSFARLLRMEGDKIGYSEDFSIYDTADSKRLI 142 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACD 182 ++ +K NLD PR I+S K+E + P ++ +VY AY+ A Sbjct: 143 RQQMKGRNLDTDVVKPRSVQRMISSAKNEMIDPQEYAELARGDQQEIVAEVYPAYERALK 202 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +A +DF +LLL+ EL+ +L+ Y+ R+ + +DE+QDTN QY R L+ Sbjct: 203 QANALDFDDLLLKPIELFEQHEDVLEKYQTRWQYVHIDEYQDTNQAQYVLARKLSARHKN 262 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY +RGA + NI F ND+P A TIRLE+NYRST NI+ A+++IE N+ Sbjct: 263 LCVVGDDAQSIYAFRGADITNILNFDNDYPDATTIRLERNYRSTENIIRLADSIIEENDD 322 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 ++ K LWTD A+GE ++L A +E DEA+ + R++ +G + A+LYR+NAQSR Sbjct: 323 QIEKSLWTDNAEGEYVALMEALSEKDEAQKIERRVRDLHLRDGMEYGDFAVLYRTNAQSR 382 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +EEAL + ++PYR+ GG F+ER+EIKD L+YL+L+ N ND A+ +RV+N PTRGIGD+ Sbjct: 383 AIEEALRKENVPYRVIGGTSFYERKEIKDVLAYLKLLVNPNDTASLQRVINYPTRGIGDK 442 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL--HV 479 T +++ ++ L+LWQA + + + L RA A+ +F LI A + + Sbjct: 443 TQARLQRYAQQHSLSLWQAVERVEEIETLGTRAERAVGKFRRLIARYASKAGTGSVPADE 502 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +I+D+GL + +E + R EN++EL++A ++ + ED + FL A Sbjct: 503 LARDLIQDAGLLSELRKEHTRENLQRWENVQELISALAEYVESTED---ATISTFLQEVA 559 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + +A+ D V LMTLH+AKG EFP VF+ G+EEG+FP + + E LEEERRL Sbjct: 560 LMTDQDEAEEGDDKVTLMTLHAAKGTEFPVVFVAGLEEGLFPLEQATQEKAELEEERRLF 619 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-------EVRLRATVSR 652 YVGVTRA ++L L++A +R YG++ + SRF+ E+ + V E + + Sbjct: 620 YVGVTRAEERLYLSWARSRYRYGEQTSNTRSRFLEEVDSDVVRTEAGGELEQQTDRFSAE 679 Query: 653 PVSHQRMGTPMVENDSGYKLGQ-------------------------------------R 675 G + Sbjct: 680 EGPSADYDEMDPHYYRQDLSGDGGATGSSDGLRRIESTDGGGGRRVVYDEGHGEIVPGAQ 739 Query: 676 VRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLESV 720 V H KFG G + ++EG G+ + V F G K L YA L + Sbjct: 740 VEHQKFGRGKVQSLEGEGDKATAVVFFGSDVGNKKLKLKYANLRVI 785 >UniRef50_B1C8W2 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C8W2_9FIRM Length = 741 Score = 880 bits (2275), Expect = 0.0, Method: Composition-based stats. Identities = 284/742 (38%), Positives = 420/742 (56%), Gaps = 29/742 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LL LN+KQ+EAV LL+LAGAGSGKTR ++HRIA+++ P+ I+A+TFTN Sbjct: 2 DLLSMLNEKQQEAVTCVDGPLLILAGAGSGKTRTIIHRIAYIIENGYAKPWEILALTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EMR RI + +W+GTFH + R+LR + +F I D +D R++K Sbjct: 62 KAAGEMRERIDSMGIPFTSDIWMGTFHSICARILRIEGHNLGFTSNFSIYDDDDTKRVVK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-----QTWQKVYQAYQE 179 ++K +++ +K++P I+ K+ + E ++Y YQ+ Sbjct: 122 SILKDLDISDKEFPVEGVKSQISLLKNNLETSDDYLEEHDDFEGGYTEARIAQIYAEYQK 181 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + +DF +LLL + L+ P +L Y+ RF ILVDE+QDTN QYA + LA D Sbjct: 182 RLLSSNAMDFDDLLLNMNILFAKCPEVLNKYKNRFKYILVDEYQDTNLSQYAIVSKLAED 241 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + + GDDDQSIYGWRGA + NI F DF A IRLEQNYR T NIL+AAN +IE+ Sbjct: 242 HRNICVCGDDDQSIYGWRGASIRNILEFEEDFEDAAVIRLEQNYRCTKNILNAANGVIEH 301 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNA 358 N R+GK L+TD +GE I A ++L+E+ + I + +G ++ AILYR+NA Sbjct: 302 NQRRMGKTLFTDNDEGEKIKYLNANSDLEESSLISREIFCLNEYHGIPYSDIAILYRTNA 361 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LEE L++ ++PY+I G +F++R EIKD L+YL+LI N DD A RV+NTP RGI Sbjct: 362 QSRMLEEGLMRRNIPYQIVAGTKFYDRMEIKDILAYLKLIVNPQDDLALIRVINTPKRGI 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G +++ ++ + + ++++ + + G L F + I+ + + + L Sbjct: 422 GPASVEKIKDYAFMKGTSMYEVIKHIDSSPLFKGAIKEKLMNFRDTIEEIRRLPENNGLM 481 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 I SG M ++ K E R+ENL+ELV A F NEE+ L+AFL +A Sbjct: 482 DIVINTIHLSGYEEMLKEGKVENASNRLENLDELVNAAGDFESNEEENT---LEAFLENA 538 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL AG D V LMTLH+AKGLEF VF+ GMEE +FP+ +++E +EEERRL Sbjct: 539 ALVAGVDSYDEDSSKVLLMTLHNAKGLEFNIVFMPGMEENLFPTYRAVNEDSEMEEERRL 598 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 YVG+TRA ++L ++ AE+RR+YG+ Y PSRF+ E+P+E +E Sbjct: 599 CYVGITRARKQLYMSSAESRRVYGRNEYRNPSRFLLEVPDELIEGTNVIKESNKEKELLK 658 Query: 643 ----EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 + S + +D G ++ H+ +G GT+V ++GSGE +++ Sbjct: 659 SSIKRIYDPYKQSPKKTENLFKQNNSFSDVDLNPGDKIDHSAWGVGTVVGVDGSGEDAKV 718 Query: 699 QVAFQGQGIKWLVAAYARLESV 720 AF GIK +A A+ + V Sbjct: 719 TAAFPEIGIKKFMAGIAKFKKV 740 >UniRef50_Q67KI7 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67KI7_SYMTH Length = 825 Score = 879 bits (2272), Expect = 0.0, Method: Composition-based stats. Identities = 304/816 (37%), Positives = 423/816 (51%), Gaps = 111/816 (13%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS----------------- 48 LL LN++QREAV + LL+LAGAGSGKTRV+ HRIA L+ Sbjct: 5 LLSGLNEQQREAVLHGQGPLLILAGAGSGKTRVIAHRIAHLILFGPEYDPDAPPPPGLTA 64 Query: 49 -------------------------VENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG 83 P+ I+A+TFTNKAAAEMR R+ QL+G Sbjct: 65 DDLEALRLAVEGPGPIDTGAIAHLLGGGIDPWRILAITFTNKAAAEMRERVEQLVGPRAR 124 Query: 84 GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAM 143 +W TFH R+LR ++F ILD+EDQ +++ +K + L E+Q+ P + Sbjct: 125 EVWAATFHSTCVRMLRRDIERLGYGRNFVILDAEDQQAVIRDCLKRLGLSERQFQPGAVL 184 Query: 144 WYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN 202 I++ K+ L P G+ Q KVY YQE +DF +LLL+A EL Sbjct: 185 GTISNAKNAMLDPRRFADRAGDYWRQQVAKVYALYQEQLRSGNALDFDDLLLKAVELLER 244 Query: 203 KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVE 262 + ++Y+ +F ILVDE+QDTN++Q W+ LLAG+ + +VGDDDQ IY WRGA + Sbjct: 245 FDDVREYYQRKFEYILVDEYQDTNHVQNRWVFLLAGEKQNLAVVGDDDQGIYSWRGADIS 304 Query: 263 NIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYC 322 NI F FPG TI+LEQNYRST NILSAA A++ +N GR K+LWT G+P+ + Sbjct: 305 NILEFEAQFPGCRTIKLEQNYRSTQNILSAAYAVVRHNTGRKEKRLWTAAGPGDPVYHFT 364 Query: 323 AFNELDEARFVVNRIKTWQDNGGA------LAECAILYRSNAQSRVLEEALLQASMPYRI 376 A +E DEA FV ++ G + A+LYR++AQSR LEEA+++ S+PY I Sbjct: 365 AADERDEAAFVAREVERLVAEGLPDGTRLDYQDFAVLYRTHAQSRALEEAMVRRSIPYGI 424 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 YGG+RFFER+EIKD L+YLR+IAN D +F R V P RGIG T+D + + Q+ Sbjct: 425 YGGLRFFERKEIKDVLAYLRIIANPADIVSFRRAVGVPKRGIGPATVDKLVDYAEQWQVP 484 Query: 437 LWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQ 496 + A + L+G ++ F LI+ L +A + D V++ +G+ Sbjct: 485 VALAALDCSMVPGLSGTYQKRMEEFGALIEELTNLSAHCTVGQLIDAVLERTGILEELRA 544 Query: 497 EKGEKGQTRIENLEELVTATRQFS--YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAV 554 + + R+EN++EL + +F EE + L L +FL+ AL Q Q+ V Sbjct: 545 DTSLEAAARLENVQELRSMAAEFEPPAGEELDGLRDLDSFLATVALLTDADQVGEGQNKV 604 Query: 555 QLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTY 614 LMTLHSAKGLEFP VF+VG+EEG+FP +L + ++EEERRL YVG+TRA +L LT Sbjct: 605 TLMTLHSAKGLEFPVVFLVGLEEGVFPHNRALTDEVQMEEERRLCYVGMTRARLRLYLTN 664 Query: 615 AETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT------------- 661 A +R L+G+ Y+ PSRF+ E+P E VEEV A S P Sbjct: 665 AVSRNLWGQSNYNAPSRFLLEIPAELVEEVTPAAGASGPRRSAWDDGAAWEDAGAAVRRP 724 Query: 662 ------------PMVENDSGYKLG------------------------------QRVRHA 679 ++D +G RVRH Sbjct: 725 AWDGGARAARRREWEDDDFSPAIGAAGWGRTAQARRLQKALEPPSEETPQFQPGDRVRHE 784 Query: 680 KFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAY 714 +FGEG + + G + V F G G + LVA+Y Sbjct: 785 RFGEGVVKAVIGD----TVTVQFAGAAGQRVLVASY 816 >UniRef50_A4XKK0 ATP-dependent DNA helicase PcrA n=2 Tax=Clostridia RepID=A4XKK0_CALS8 Length = 714 Score = 877 bits (2268), Expect = 0.0, Method: Composition-based stats. Identities = 275/720 (38%), Positives = 413/720 (57%), Gaps = 12/720 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LN +Q EAV + LLVLAGAGSGKTRV+ +RIA+++++ P +I+A+TFTN Sbjct: 2 EWLKELNKEQLEAVLSTEGPLLVLAGAGSGKTRVITYRIAYILNMGLAKPSNILAITFTN 61 Query: 65 KAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RI +L+ S MWV TFH ++LR + +F I D +D+ +LL Sbjct: 62 KAADEMKERIKKLVSVESFAEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDRNQLL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 K +N+DE++ + I++ K+ + P + GN V+ +VY+ Y + Sbjct: 122 KECFTKLNIDEEKLELKFVSRLISNFKNMLVGPSDVYKEGN-VDPRVVEVYRLYNKLLKE 180 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +LL L+ P IL+ Y+ +F ILVDE+QDTN+ Q+ I LL+ + Sbjct: 181 YNAFDFDDLLYYTIMLFKTNPDILEKYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNI 240 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY +RGA V NI F N FP A+ I+LE+NYRST ILSAAN +I+NN R Sbjct: 241 CVVGDDDQSIYSFRGADVRNILEFENVFPDAKVIKLEKNYRSTKTILSAANEVIKNNRNR 300 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LWTD +GE I LY AF+E+DEA FV IK G +E ILYR+NAQS Sbjct: 301 KPKRLWTDNNEGEKIYLYPAFDEVDEANFVSMSIKNLIQGGIKPSEIGILYRTNAQSLNF 360 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E AL S+PY++ G +RF+ER+EIKD ++YLRLI N +D+ + RV+N P RGIG T+ Sbjct: 361 ENALSSHSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVPKRGIGPSTV 420 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + ++ S + ++ ++ +E + R + L F+ L++++ E + + Sbjct: 421 EKIKVLSDEYGISAYRLLKERGDFE-FDRRTYAKLYDFILLLESMRTEAESKSVVEVIEL 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 V+ + K E+ R +N+E+L++A F ED+ LQ FL+ L Sbjct: 480 VLDKTKYMESLLSSKNEEDFQRAKNIEQLISAAAMFEEENEDK---SLQNFLNSITLSFE 536 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE---GGRLEEERRLAY 600 E +D V LMT+H+AKGLEF VF+ G+EEG+FP S E LEEERRL Y Sbjct: 537 EDDGQ-KEDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLLRSEGEIELQNELEEERRLCY 595 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V +TRA + L LTYA RR++G+ + S FI E+P + ++++ ++++ Q + Sbjct: 596 VAITRAKRFLVLTYANNRRVFGRFSSRQKSSFIDEIPIKYIQQIYTPLSITKSSGAQSIS 655 Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G ++H KFG G ++++ S + + + + F+ G K L+ +YA L + Sbjct: 656 NTEDGIKKALAVGDIIQHKKFGIGKVLSV--SEDMNEVLIDFEKFGQKRLLLSYANLIKI 713 >UniRef50_A1AUN0 ATP-dependent DNA helicase PcrA n=10 Tax=Desulfuromonadales RepID=A1AUN0_PELPD Length = 762 Score = 877 bits (2267), Expect = 0.0, Method: Composition-based stats. Identities = 288/768 (37%), Positives = 413/768 (53%), Gaps = 56/768 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD + LN Q+ AV LL+LAGAGSGKTRV+ HRIA L+ P++I+AV Sbjct: 1 MDF---VKHLNQPQKSAVLHGEGPLLILAGAGSGKTRVITHRIAHLIHNHGVRPWNILAV 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM R+ +L+G + TFH R+LR F I D D Sbjct: 58 TFTNKAAREMSERVSRLLGGG-DAPLIATFHAACGRILRREIHHLGFDSSFAIYDERDCE 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQ 178 RLLK L+K M+LD+K++ PR I+ K+ GL PH + + G+ ++Y AYQ Sbjct: 117 RLLKDLLKDMDLDDKKFSPRIVAARIDDYKNRGLFPHDLDPVATGDIFNAKVVQIYAAYQ 176 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + +DF ++L++ L P + Q +ERF I+VDE+QDTN +QY IRLLAG Sbjct: 177 ERLRKCNALDFGDMLIQTVRLLEQFPEVRQRCQERFQWIMVDEYQDTNPVQYRLIRLLAG 236 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGDDDQSIY WRGA + NI F DFP +RLEQNYRST+ IL AA A++ Sbjct: 237 ERRNLCVVGDDDQSIYSWRGADIRNILEFEKDFPDVAVVRLEQNYRSTTTILKAAGAVVS 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N GR GK LWT+ +GE I + ++ +EAR V I + + G L E A+ YR+NA Sbjct: 297 RNIGRRGKTLWTENPEGEKIRYHRVESDREEARLVAREIVSLRSRGIPLEEMAVFYRTNA 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR++EEAL+ ++PY I GG+RF+ R E+KD L+YLR++ N D+ + +R++N P+RGI Sbjct: 357 QSRLVEEALVSEALPYHIVGGVRFYARMEVKDILAYLRILDNPADEISLKRIINVPSRGI 416 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T+D + Q + + A E L + + F+++++ + A L Sbjct: 417 GGATIDRISQRVASSGASFYAAMAECAGSGLLGSGPRARVASFVDMMERFREMVALRGLP 476 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+++SG + + ++ R+ENLE+L+ A +F E E L AFL Sbjct: 477 ELCQTVMEESGYLARLRESRDQEDSERLENLEQLLAAMEEF---CEKEPQAGLSAFLEQV 533 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + Q + +V LMTLH+AKGLEF VF++GMEE +FP +LD+ +EEERRL Sbjct: 534 SLVSDLEQGGQGKPSVTLMTLHAAKGLEFRAVFMIGMEERLFPHVRALDDLDGMEEERRL 593 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---EVRLRATVSRPVS 655 YVG+TRA ++L L R L+G+E + PSRF+ ++P ++ E R + Sbjct: 594 CYVGMTRARERLYLLNTRRRYLFGQEQCNPPSRFLKDIPAGLLDDGGEPSQPGLGFRSAA 653 Query: 656 HQRMGT--------------------------------------------PMVENDSGYK 671 Q E G Sbjct: 654 EQAGRNGQEPSTGIIAMGHSGRREKTVARHDGGHNLAQVVSACDEIEVIPEPPEEHDGVF 713 Query: 672 LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +G +VRH FG+GTI +EGSGE ++ V F G K L+ +A LE Sbjct: 714 IGMKVRHGTFGQGTIRKLEGSGESQKVIVWFNSVGPKKLMLRFAGLER 761 >UniRef50_Q3A0S9 ATP-dependent DNA helicase PcrA n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A0S9_PELCD Length = 737 Score = 876 bits (2265), Expect = 0.0, Method: Composition-based stats. Identities = 307/744 (41%), Positives = 422/744 (56%), Gaps = 35/744 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLND QR+AV LL+LAGAGSGKTR L HRIA+L+ + P+ ++AVTF Sbjct: 1 MSDLLTSLNDCQRQAVLHEDGPLLILAGAGSGKTRTLTHRIAYLIQQQQVEPWQVLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAAAEMR R+ L+G + G+W+ TFH R+LR +DF I D +DQ RL Sbjct: 61 TNKAAAEMRERLQSLVG-NIDGLWISTFHAACARILRRDGEVLGYGRDFTIYDDQDQQRL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +K + + + EK PR I+ K+ GL P G+ + +VY+ YQ+ Sbjct: 120 IKDCLAQLRITEKDLKPRAVATAIDQAKNRGLLPEEYIP-GDHRGEQVARVYELYQKRLQ 178 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +A +DF +LLL+ L+ HI YR RF ++LVDEFQDTN +QYA ++ LA D Sbjct: 179 QANALDFGDLLLQTVRLFREYSHIRDAYRRRFAHLLVDEFQDTNQVQYAMVKALADDGRH 238 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIY WRGA++ NI F DFPGA IRLEQ+YRS++ IL AA ++ N G Sbjct: 239 LCVVGDDDQSIYAWRGAEIGNILNFERDFPGASVIRLEQHYRSSATILEAAGEVVACNIG 298 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R GK LWTD GEP++L ++L+EARFV I +D G L + A+ YR+NAQSRV Sbjct: 299 RKGKTLWTDNPAGEPLTLEPLPDDLEEARFVAAEIARLRDAGRHLRDVAVFYRTNAQSRV 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE L++ +PY + GG++F+ R EIKD L+YLR +AN D + R+VN P+RGIG T Sbjct: 359 LEETLVREGLPYVMVGGVKFYARMEIKDVLAYLRALANPADSLSARRIVNVPSRGIGAVT 418 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + + + ACR L+ L G AA + F ++ AQ ++P T Sbjct: 419 TGRIAEH-EEEAGGFLAACRLCLERGVLKGAAAKKVAAFSAFMERFAQRMTEVPFPQLTA 477 Query: 483 RVIKDSGLRTMYEQEKG--------EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 ++++SG +E ++ + R+ENLE+L+ + E LQ + Sbjct: 478 DLLEESGYAPNLREEAQSAMTEGERKEAKGRLENLEQLLAGMEEHQATE-----SSLQEY 532 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L AL DT D V LMTLH+AKGLEFP VF+ GMEEG+FP + E +EE Sbjct: 533 LEQVALVTDLDSYDTRLDRVTLMTLHAAKGLEFPVVFMTGMEEGIFPHGRAAGERDDVEE 592 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------------ 642 ERRL YVG+TRAMQKL LT+A RR+YG Y+ PSRF+ E+P + Sbjct: 593 ERRLCYVGMTRAMQKLYLTHARRRRIYGDYQYNAPSRFLAEIPPHLMGDKPAPALQKPAT 652 Query: 643 -------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEH 695 E + E + G ++G VRH KFG G + +EG+G+ Sbjct: 653 HNLASVFEQIEPTPFEESEDFFEDVQVVPEAEEGLRVGLHVRHVKFGVGVVRRLEGNGDQ 712 Query: 696 SRLQVAFQGQGIKWLVAAYARLES 719 ++ V F G G+K L+ +A LE Sbjct: 713 QKVIVQFPGVGLKKLLVKFAGLEP 736 >UniRef50_C8WV10 UvrD/REP helicase n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV10_ALIAD Length = 705 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 266/715 (37%), Positives = 402/715 (56%), Gaps = 24/715 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +DV+ +L LN +QR+AV LLV+AGAGSGKT VL RIA+L++ + + I+A+ Sbjct: 2 LDVTDILRGLNPEQRDAVTTTSGPLLVVAGAGSGKTSVLTRRIAYLIAHAGVAVHEILAI 61 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G +W+GTFH + R+LR +F ILDSEDQ Sbjct: 62 TFTNKAAREMKTRIRDLIGPRADDLWMGTFHSICVRILRREADRLGYQPNFTILDSEDQE 121 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 L+++ + + D K R I+ K+EG + + NP + +V + Y + Sbjct: 122 ALVQQCLLDLGYDLKTHDARSIKHRISQWKNEGAT--RVVNESNPSDLIADRVMELYNKR 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +L+ L + Y+E+F ++LVDE+QDTN IQ+ +RLL Sbjct: 180 LFAANAMDFDDLIGHTVRLLEQNDDLRDKYQEKFRHVLVDEYQDTNGIQFRLLRLLCAKH 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGD DQ+IY WRGA E++ RF DFP A+ + L +NYRST IL AAN++I +N Sbjct: 240 RNLCAVGDADQAIYAWRGADSEHMLRFERDFPDAKIVVLTRNYRSTQEILDAANSVIAHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+L + G+ + + EA +V I+ NGG +CA+LYR+NAQS Sbjct: 300 PRRRPKELRSTRGHGDKPLVVRLPDGAAEAHYVAEAIEEHVRNGGRYEDCAVLYRANAQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EE LL+ ++PY + GGM F++R+E+KD L+YLR++ N D+ + R++N P RG+GD Sbjct: 360 RAIEEKLLERAIPYTVVGGMTFYDRREVKDVLAYLRVLVNPQDEISLLRIINRPKRGLGD 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +D + + + ++L++A +E L+ R A A ++F + LA M + Sbjct: 420 TAVDRLLEFAHAEGMSLYEALAH-GEEAGLSERTAEAARQFHASLQELALWMEGMAVSEF 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 V+ + R MY + ++ R+EN++EL + TR F + FL+ +L Sbjct: 479 LAEVLHATRYREMYLESGKKEDLARVENIDELFSVTRSFDERRGGT----VAEFLAEVSL 534 Query: 541 EAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 + + D + +V+LMTLH++KGLEFP VF+VGMEEG+FP S+D+ R+EEER L Sbjct: 535 LSDIDKERDRGKGSVRLMTLHASKGLEFPVVFLVGMEEGLFPHARSMDDPLRIEEERNLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRAM +L LT+A R LYG+ V PSRF+ E+ E+ V V L Sbjct: 595 YVGLTRAMDRLVLTHAAWRTLYGQTVAREPSRFLAEIREDLVVRVDLAE----------- 643 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QGQGIKWLVAA 713 + G RV H + G+G ++++E R+QV F G+KW+ Sbjct: 644 ----ALEPEVLRPGDRVVHPQHGQGIVLSVESHAGEERVQVMFHPSIGMKWVSKK 694 >UniRef50_UPI00016C0C66 ATP-dependent DNA helicase PcrA n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0C66 Length = 731 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 289/733 (39%), Positives = 409/733 (55%), Gaps = 24/733 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+Q++AV LL+LAGAGSGKTRVL RIA L+ P+ I+A+TFTNKAAA Sbjct: 2 NLNDRQKKAVQHVNGPLLILAGAGSGKTRVLTQRIANLIENHQVQPWEILAITFTNKAAA 61 Query: 69 EMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ +G MW+ TFH + R+LR + F I DS +Q +K ++ Sbjct: 62 EMRERMTNDVGEDVLKNMWISTFHSMCVRILRRFGESIGYTKYFTIYDSAEQKITIKDVM 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEACDRAG 185 K MN++EK++ +I+S+K++ + P +S GN E K+Y AYQ+ Sbjct: 122 KEMNINEKEFQVGAVFSHISSKKNQFILPRQALKESEGNFREHIIAKIYDAYQDKLYENN 181 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 ++DF +LL+ L+ N P +L Y+ +F ILVDE+QDTN +QY IR LA + + Sbjct: 182 VMDFDDLLVNVCILFNNHPDVLSFYQNKFKYILVDEYQDTNCVQYELIRQLADKHKNLCV 241 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA + NI F DF I+LEQNYRST NIL AANA+++NN R Sbjct: 242 VGDDDQSIYGWRGADISNILEFEKDFENTTIIKLEQNYRSTKNILEAANAVVKNNENRKP 301 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRVLE 364 K L+TD GE I LY NE EA + +I K + + AILYR+NAQSRVLE Sbjct: 302 KVLFTDNETGEQIELYVVKNEYREADVIAAQISKDLSEYRRDYKDFAILYRTNAQSRVLE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E ++Q+S+PYR+ GG+RF+ER+EIKD +SYL++I N DD A R++N P RGIG ++D Sbjct: 362 EKMIQSSIPYRMLGGVRFYERKEIKDLVSYLKIIVNVQDDVAARRIINIPKRGIGAASID 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 ++Q + D Q+ ++ + + Q L A + F LI+ L + + + + Sbjct: 422 KIQQAANDYQVNFYEVAKNIRQFGILGKTATEKVSVFANLIEELKELAQEENILALLQAI 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 I + ++ + E RI N+ E V+ + + E+ L FL L A Sbjct: 482 IVKTDYNNFLKETEPEDAADRILNVREFVSKAAAYVQSNEE---ANLNNFLEEITLVADV 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVG 602 D +AV LMTLHS+KGLEFP VF+ G+EEG+FPS MS + +LEEERRL YVG Sbjct: 539 DNYDQNSNAVVLMTLHSSKGLEFPVVFMPGLEEGLFPSHMSASDEDKTKLEEERRLCYVG 598 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 +TRA +KL + AE R YG+ PSRFI ELP E + ++ A+ + T Sbjct: 599 ITRAREKLYILQAEERMTYGQIKAVEPSRFIAELPAEVIRINKVFASKKYAKKNNYEPTK 658 Query: 663 MVENDSGYK---------------LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 + + G V H FG+GT++ E + + F+ Sbjct: 659 KSDIEFKIWNPHKKMESTIIEDFVTGDIVMHRMFGKGTVIEKMKKKEDIFVTIKFESGEF 718 Query: 708 KWLVAAYARLESV 720 K L +A+L+ V Sbjct: 719 KKLNTKFAKLQKV 731 >UniRef50_D1CD72 UvrD/REP helicase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CD72_THET1 Length = 779 Score = 875 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 286/776 (36%), Positives = 421/776 (54%), Gaps = 64/776 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L+ LNDKQ EAV AP +LVLAG GSGKTRVL HRIA+L+ + SP++I+AVTFT Sbjct: 9 SSILEGLNDKQLEAVTAPDGPVLVLAGPGSGKTRVLTHRIAFLL-SQGVSPFNILAVTFT 67 Query: 64 NKAAAEMRHRIGQLMGT-----SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 NKAA EMR RI +L+G + +GTFH + R+LR + +F I D +D Sbjct: 68 NKAAREMRERIERLVGGAFGSYEARNITMGTFHSICSRVLRRDGGAIGISPNFVIYDDDD 127 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQA 176 Q+RL+K+ + + LDEKQ+ PR I+S K L P S G + ++ +VY+ Sbjct: 128 QIRLIKQALNEIGLDEKQYAPRSIQARISSAKSALLDPEDYSSQGVSSYFDEIAARVYRR 187 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ+ + VDF +LL++ LW + P ILQ YR+R+ +LVDE+QDTN QY I LL Sbjct: 188 YQQLLEINQAVDFDDLLMKVVLLWKSYPDILQQYRDRWQYVLVDEYQDTNRAQYMLINLL 247 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD+DQ IY WR A + NI F D+P A+ I LEQNYRS IL A+ + Sbjct: 248 TQEHRNIFVVGDEDQGIYSWRAADIRNILNFERDYPEAKVILLEQNYRSYQEILDVASHI 307 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYR 355 I +N R KKLWT+ + G + + A++E DEA ++ I G ++ A++YR Sbjct: 308 ISSNRLRRPKKLWTNKSGGALVRVREAYDEQDEASYIAREISRLTSLGEYTYSDFAVMYR 367 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV-NTP 414 +N+QSR +EEA + +PY+I GG RF+ER+E+KD L+YLRLI N +D A+ R++ NTP Sbjct: 368 TNSQSRPVEEAFSRYRIPYQIIGGTRFYERREVKDVLAYLRLIHNPHDAASLRRIIENTP 427 Query: 415 T-RGIGDRTLDVVRQTSRDRQLTLWQACREL---------------LQEKALAGRAASAL 458 + RGIG T+ + + ++LW A L+ L +A +L Sbjct: 428 SGRGIGKGTMKTLEDLASRAHISLWDAIEIALGIKSLEEVGAFLPNLEIPKLQSKAKESL 487 Query: 459 QRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 ++ + LI L ++ + L D ++ SG + E+ R+EN +L++ + Sbjct: 488 KQLVGLIYELREQRDILTLPHLIDTLLIKSGYASFL-SSGAEEDLERLENARDLISIAQD 546 Query: 519 FSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEG 578 ++ + L FL AL++ + V L+TLH+AKGLE+ VFI+G EEG Sbjct: 547 YAAID---TSEALVEFLQEVALQSDVDTMQNNGNQVTLITLHAAKGLEYKVVFIIGFEEG 603 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 + P S+D +EEE RLAYVGVTRAM+KL ++YA R ++G + PSRF+ +P Sbjct: 604 LLPHARSMDRESDIEEECRLAYVGVTRAMEKLYISYAFHRNVFGATQTNVPSRFLANIPP 663 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVE--------------------------------- 665 + ++ P +P Sbjct: 664 DLLDGSLPSLGRRGPGRLTSTTSPRTPSGSTYPGGARNYSGQSYRPFPSNSNFVSSSNLE 723 Query: 666 -NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 YK G RVRH KFGEG ++ +E GE + ++V F K L+A+ ARL+ + Sbjct: 724 RIIQEYKPGDRVRHPKFGEGVVLKVEIQGEDAEVEVRFAAGSTKKLLASMARLQKI 779 >UniRef50_A7NGD4 UvrD/REP helicase n=11 Tax=Chloroflexi RepID=A7NGD4_ROSCS Length = 759 Score = 874 bits (2259), Expect = 0.0, Method: Composition-based stats. Identities = 281/758 (37%), Positives = 404/758 (53%), Gaps = 42/758 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D S +LD LN QR+AV A +LVLAG GSGKTRVL R+A+L+ V P+ I+AVT Sbjct: 3 DASTILDGLNPAQRQAVTAAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVT 62 Query: 62 FTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAA EMR R+ +L+G + VGTFH + R LR + +DF I D++DQL Sbjct: 63 FTNKAAREMRDRLEKLLGPGEAAALTVGTFHSICARFLRRDSIHLGRERDFAIYDTDDQL 122 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 R++KR+++ +NLDEK+ PR I+ K+E + P + + E+ + + YQE Sbjct: 123 RVMKRVLRDLNLDEKKHAPRAIHAAISRAKNELIDPDAYSRHAHSYFEEVVARCFARYQE 182 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +DF +LL+ L+ P +L+ Y+ER+ +L DE+QDTN QY ++ LA Sbjct: 183 LLRGANALDFDDLLVETVRLFEEHPAVLERYQERYGFLLADEYQDTNRAQYVLLKQLASR 242 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD+DQS+Y +RGA + NI F D+P A+ I LEQNYRST IL A A+I Sbjct: 243 HHNIFVVGDEDQSVYAFRGADIRNILSFERDYPEAQVILLEQNYRSTQAILDVAQAVINR 302 Query: 300 N-NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSN 357 + R K+LWT +G + + +++ +EA+ V I G + AI+YR+N Sbjct: 303 SAQRRRDKRLWTRNGEGVLVQVIEGYDQDEEAQLVAGEIARLIAGGAYQPGDIAIMYRTN 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR +EEAL+ PY I GG RF+ER+EIKDAL+YLRL N DD + RV+N P RG Sbjct: 363 AQSRAIEEALIARQAPYIIVGGTRFYERKEIKDALAYLRLALNPFDDISLSRVLNWPARG 422 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEK----------------ALAGRAASALQRF 461 IG RT + + + + + L+ L + RA +AL F Sbjct: 423 IGQRTQEDLERRAGAAAVPLYVMLHTLAANAEAAADQTTSPAPARTGEMPSRARNALLGF 482 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEK-GEKGQTRIENLEELVTATRQFS 520 + LID + L D + + G R +E E+G R N+ EL Q++ Sbjct: 483 LTLIDESLDRRQTLSLGALMDWLFERVGFREALRREYGDEEGDDRWNNVMELRNVAEQYA 542 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 + L FL AL + ++AV +TLH AKGLEFP VF+VG+EEG+ Sbjct: 543 ---DLPLASQLSTFLEEVALVSDIDTLQEERNAVTCITLHQAKGLEFPVVFLVGLEEGLL 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 P S D+ L+EERRL YVG TRA ++L L +A R YG+ PSRF+ ++P + Sbjct: 600 PHARSADDRDALDEERRLFYVGATRAKERLYLLHAFRRATYGRTEIATPSRFLHDIPPDL 659 Query: 641 VEEV------------------RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG 682 ++ R P + GQ+V HA+FG Sbjct: 660 LQRAPKRGYAAAQMVTGRAAALRNPRRNQAAPVSPHSAAPDGPRAISFFAGQKVHHAQFG 719 Query: 683 EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 EG +V+ + + VAF G+G+K L+A++A L+ V Sbjct: 720 EGIVVSSKLVEGDEEVTVAFVGKGVKRLLASFANLQHV 757 >UniRef50_D2RIV6 ATP-dependent DNA helicase PcrA n=6 Tax=Veillonellaceae RepID=D2RIV6_ACIFE Length = 750 Score = 873 bits (2256), Expect = 0.0, Method: Composition-based stats. Identities = 292/752 (38%), Positives = 426/752 (56%), Gaps = 36/752 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN++Q EAV +L+LAGAGSGKT+ L +IA+L+ + P++I+A+TF Sbjct: 1 MRDLLASLNEQQAEAVRQIAGPILILAGAGSGKTKALTTKIAYLL-EKGVKPWNILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLR 121 TNKAA EMR R+ L+G S +W+ TFHG ++LLR F I D D Sbjct: 60 TNKAAKEMRQRVDALVGPSAKDVWLYTFHGFCNQLLRRDINALPGYTTSFSIYDPSDCKN 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 +LK +K +NLDEK +P + I++ K+ + + + ++Y YQ+ Sbjct: 120 VLKEALKKLNLDEKFYPLPGLLATISNAKNAQVDAAAFARQAEDYHAKKVAEIYAEYQKH 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 ++ VDF +LLL +L P + + Y+ +F +L+DE+QDTN++QY +LL+ Sbjct: 180 LVQSNAVDFDDLLLLTVKLLQTVPEVREKYQNKFHYVLIDEYQDTNHVQYLLAKLLSAPE 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGD DQSIYGWRGA + NI F D+P A +LEQNYRST IL AAN +I++N Sbjct: 240 NNLCAVGDIDQSIYGWRGADISNILDFEKDYPQARIFKLEQNYRSTQVILDAANEVIKHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K LWT+ +G+PI+ Y A ++ +EA FVV +I+ Q G L + AILYR+NAQS Sbjct: 300 AARRPKNLWTENGNGQPIAYYQARDDREEAEFVVGQIRKLQREGTKLGDMAILYRTNAQS 359 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EE L+ +PY + G ++F++R+E+KD LSYLR ++N D ER++N P RGIG Sbjct: 360 RMFEENLINNGVPYVMVGSLKFYDRKEVKDTLSYLRFLSNERDIQGLERIINEPKRGIGA 419 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T+ VR D +TL + + + + L GRA +Q F ++I LA+ +P+ Sbjct: 420 ATVAKVRTLLEDSGMTLPEVLQTVQARELL-GRAFPKIQAFSDMIQELARVKDTLPVKDL 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++V++ SG E ++ ++R++NL E + +F+ + +E+ L+ FL+H AL Sbjct: 479 MEQVLEKSGYLEALRLEGSDQSKSRLDNLNEFLRIADEFAKDPGEENNKTLEDFLNHVAL 538 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A A QD+V LMTLHSAKGLEFP VFI GME+G+FPSQ SL++ +LEEERRL Y Sbjct: 539 VADIDDAKLTQDSVTLMTLHSAKGLEFPVVFIGGMEDGLFPSQRSLEDEDKLEEERRLCY 598 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRA ++L LT +R +YG V + PSRF+ E+P +E V +R + QR Sbjct: 599 VGITRAKKRLYLTNCRSRMVYGHVVMYPPSRFLEEIPRNLIENVAVRRSTYGGYGGQRGH 658 Query: 661 TPMVEND-------------------------------SGYKLGQRVRHAKFGEGTIVNM 689 ++ G + RH KFG GTI+ Sbjct: 659 QGSTGTHASLRTIARSRGGSILDTPAPRSRFVPEGGAVPEFRPGDKCRHKKFGTGTIIEA 718 Query: 690 EGSG-EHSRLQVAFQGQGIKWLVAAYARLESV 720 G E + VAF G GIK L Y LE + Sbjct: 719 RPDGSEGQLVTVAFPGSGIKQLATKYKILEKI 750 >UniRef50_UPI0001C37867 ATP-dependent DNA helicase PcrA n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37867 Length = 786 Score = 872 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 284/779 (36%), Positives = 428/779 (54%), Gaps = 67/779 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN----------- 51 + +ND Q+EAV +LVLAGAGSGKT V+V+RIA ++ N Sbjct: 14 LKKYFSRMNDMQQEAVFTVNGPVLVLAGAGSGKTTVIVNRIANMIKFGNAFYDETRSGSE 73 Query: 52 ----------------------------CSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQG 83 P++I+A+TFTNKAA E++ R+ ++G + Sbjct: 74 EDIAFLKDYAAGKTDDADTLRDIVAADPIKPWNILAITFTNKAAGELKERLAAMLGEEEA 133 Query: 84 -GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQA 142 + TFH R+LR+ DF I DS+D R++K ++ +++ EKQ P+ Sbjct: 134 VKINASTFHSACVRILRSEITALGYGSDFTIYDSDDSQRMIKSVMAELDISEKQLAPKAV 193 Query: 143 MWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELW 200 + I+ KD+ + P +++ + ++ K+Y YQE A +DF ++L EL+ Sbjct: 194 LGEISRAKDQMITPEQLRADAGQDYRKKMVAKIYARYQEGMRTANALDFDDILTLTVELF 253 Query: 201 LNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQ 260 P +L+ YR R+ I+VDE+QDTN++Q+ + LL+ + +VGDDDQSIY +RGA Sbjct: 254 EQFPEVLEKYRTRYKYIMVDEYQDTNHVQFRLVSLLSDSHKNLCVVGDDDQSIYKFRGAN 313 Query: 261 VENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISL 320 +ENI F + F GA+ IRLEQNYRST IL+AAN++I NN GR K LWT G G+ + Sbjct: 314 IENILGFEDQFAGAKVIRLEQNYRSTQTILNAANSVIGNNVGRKAKTLWTAGEQGDKVYW 373 Query: 321 YCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGM 380 Y A +E DEA FV IK + G A+ A+LYR NAQS +E L++ +PYR+YGGM Sbjct: 374 YKAVDETDEANFVAETIKKYHKETGRYADNAVLYRMNAQSNAIERMLMKCGIPYRVYGGM 433 Query: 381 RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQA 440 RFF+R+EIKD SYL I N ND F+R++N P RGIGD TL ++ SRD +L+ + Sbjct: 434 RFFDRKEIKDVTSYLAFINNHNDMLRFKRIINEPKRGIGDSTLALIEDISRDLKLSPFDV 493 Query: 441 CRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGE 500 + + LA + ++L+ E+ + L Q++ ++PL D V++ +G + E Sbjct: 494 LKTCEEYAPLAKKV-TSLRNAYEMFEDLTQKSEELPLDEFLDEVMEKTGYLDYLK--TLE 550 Query: 501 KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLH 560 T+IEN++EL ++ Q+ E+ L FL AL + D V LMT+H Sbjct: 551 NADTKIENVQELRSSVVQYMNESEEPT---LGGFLEEVALYTEADRDPETDDKVTLMTVH 607 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 SAKGLE+ +F+VG+++G+FPS S D +EEERRLAYV +TRA + L LT A R L Sbjct: 608 SAKGLEYDNIFVVGLDDGIFPSSRSFDSEDDMEEERRLAYVAITRAKKHLYLTNASQRML 667 Query: 621 YGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDS------------ 668 +G+ + SRF+ E+ E +E+ A + ++ + V + + Sbjct: 668 FGQTQRNVTSRFMREIGSELIEKHDNAAAMRSKLAEEDKSMTEVHSATLQQQLARNKTKP 727 Query: 669 -------GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y G+RV H FGEGT+V++ S L+VAF+ G K ++A YA+L+ + Sbjct: 728 AAPKEAVTYTAGERVAHNIFGEGTVVSVTPMANDSMLEVAFEKVGTKKIMANYAKLKKL 786 >UniRef50_C1A3F5 ATP-dependent DNA helicase UvrD1 n=31 Tax=Bacteria RepID=C1A3F5_RHOE4 Length = 830 Score = 871 bits (2252), Expect = 0.0, Method: Composition-based stats. Identities = 292/793 (36%), Positives = 411/793 (51%), Gaps = 84/793 (10%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL+ LN +QREAV S LL++AGAGSGKT VL RIA+L++ +P I+A+TFT Sbjct: 29 DALLEGLNPQQREAVVHAGSPLLIVAGAGSGKTAVLTRRIAYLLAERGVTPGQILAITFT 88 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA-NLPQDFQILDSEDQLRL 122 NKAAAEMR R+ L+G MWV TFH R+LRA L +F I DS+D RL Sbjct: 89 NKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAALLPGLNSNFSIYDSDDSRRL 148 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN----PVEQTWQKVYQAYQ 178 L + K + LD K++ R +I++ K+E + P + + + KVY YQ Sbjct: 149 LTMISKDLELDTKRFSARLLATHISNLKNELVGPEEAVVAADQDPAELPRLIAKVYGHYQ 208 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + A +DF +L+ L P I ++YR RF ++LVDE+QDTN+ QY +R L G Sbjct: 209 QRLRAANALDFDDLIGETVALLQAFPQIAEYYRRRFRHVLVDEYQDTNHAQYMLVRELVG 268 Query: 239 DTG---------KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNI 289 G ++ +VGD DQSIY +RGA + NI+ F D+P A TI LEQNYRST NI Sbjct: 269 GAGESDHAVAPAELCVVGDADQSIYAFRGATIRNIEEFERDYPDARTILLEQNYRSTQNI 328 Query: 290 LSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALA 348 LSAAN++I N GR K+LWTD +GE I Y A NE DEA FV + I D G A Sbjct: 329 LSAANSVISKNTGRREKRLWTDSGEGELIVGYVADNEHDEASFVASEIDRLVDQGETKFA 388 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 + A+ YR+N SR LEE ++ +PY++ GG+RF+ER+E++D ++YLR++AN +D + Sbjct: 389 DIAVFYRTNNSSRALEEIFIRLGVPYKVVGGVRFYERKEVRDIVAYLRVLANEDDTVSLR 448 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK--ALAGRAASALQRFMELID 466 R++NTP RGIGDR V S R ++ A R+ + K L R+ A+ F+E++D Sbjct: 449 RILNTPRRGIGDRAEACVAVHSEHRNISFAAALRDGAEGKVALLNTRSQKAIASFLEMMD 508 Query: 467 ALAQETAD-----------MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTA 515 L + + V++ +G R + R++NL ELV+ Sbjct: 509 GLRALLPTPAADEDEPFELGDIGEVAEAVLERTGYRAELAASSDPQDGARLDNLNELVSV 568 Query: 516 TRQFSYN-------------------EEDEDLMPLQAFLSHAALEAGEGQADTWQDA-VQ 555 R+FS + E + D L AFL +L A Q D V Sbjct: 569 AREFSSDARNAAGLIDPDDEETAAMREGEPDPGSLAAFLERVSLVADADQLPDSDDGVVT 628 Query: 556 LMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYA 615 +MTLH+AKGLEFP VF+ G E+G FP +L + L EERRLAYVG+TRA Q+L LT A Sbjct: 629 MMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARQRLYLTRA 688 Query: 616 ETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA--------------------------- 648 R +G+ + + SRFI E+PE+ + R Sbjct: 689 IMRSAWGQPIQNPASRFIQEIPEDLINWRREDPGTGGGFGSGRPGYGSGSRYGSQGGQGY 748 Query: 649 ---------TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 + + N G RV H K+G GT++ +G+G + + Sbjct: 749 GGGQNYGGGSGKAASTPSFGAARGRNNVLVLATGDRVSHDKYGLGTVLETKGTGPTATVT 808 Query: 700 VAFQGQGIKWLVA 712 + F G L+ Sbjct: 809 IDFGSAGKVRLML 821 >UniRef50_C7HU69 ATP-dependent DNA helicase PcrA n=2 Tax=Anaerococcus RepID=C7HU69_9FIRM Length = 729 Score = 870 bits (2250), Expect = 0.0, Method: Composition-based stats. Identities = 259/738 (35%), Positives = 432/738 (58%), Gaps = 27/738 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L +LNDKQ+EAV + LLV+AGAGSGKTRVL IA+L+ +N +P +I+A+ Sbjct: 1 MD----LSNLNDKQKEAVLHDKGPLLVVAGAGSGKTRVLTTSIAYLIKEKNVNPVNILAI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+ +W+GTFH + R+LR + +F I D+ DQ Sbjct: 57 TFTNKAANEMKERISDLLDEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQK 116 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--EQTWQKVYQAYQ 178 L+K +I +N + P++A+ I+ K++ + P + ++ + +Y+ Y+ Sbjct: 117 TLVKEIINDLNYKD-DISPKEALNLISYCKNKSISPKEFLNINTFYAKQEEYYNIYKNYE 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF +L+L+ EL+ + L++Y+++F + VDE+QDTN QY I+ + Sbjct: 176 KKKFEYNSLDFDDLILKTLELFAEDSNTLKYYQDKFEYLFVDEYQDTNKSQYELIKFIGK 235 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 V +VGD DQSIY +RGA + NI F DF A+TI+LE+NYRSTSNI++ AN LI+ Sbjct: 236 GHNNVRVVGDADQSIYSFRGADINNILDFEKDFKDAKTIKLEENYRSTSNIINVANKLIK 295 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN+ R K LWT DG + + E +E +FV++ I + ++G L + AILYR NA Sbjct: 296 NNSERKEKNLWTSKNDGSEVLYKKSSVESEEGKFVIDEINSLLNDGYRLKDMAILYRMNA 355 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+ EE L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P +GI Sbjct: 356 QSRIFEEYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKILVNPKDDISLKRIINEPKKGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD+T++ + + + +L + + L + S+ ++F + + D + Sbjct: 416 GDKTVEKLEKEANKLGFSLTELVCDPSLFSNLPSKLKSSCEKFYNPLAEIFDNYKDYDIV 475 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + ++ SG E+ + ++RI+NL E +++ ++ N +++ + +L + Sbjct: 476 ELIEEILDKSGYIRALEESYSVENRSRIDNLNEFISSAAEYQSNNPEDN---IHDYLENL 532 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + + D++ LMT+HSAKGLEF F+VGM+EG+FPS+ S+DE G +EEERR+ Sbjct: 533 SLLSDLDKTEDKDDSISLMTIHSAKGLEFKVCFVVGMDEGLFPSKRSIDE-GNIEEERRI 591 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV +TRAM+KL L+ AE RR +G+ VY++PSRF+ E+ + + + P + Sbjct: 592 CYVAITRAMEKLYLSSAEIRRQFGQPVYYKPSRFLNEVESSIKKIDQDKTPAYSPYVKMK 651 Query: 659 MGTPMVEN----------------DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 + + +++G ++ H K+GEG IV ++ S + + L VAF Sbjct: 652 SNEAYMRDKARESVLKKNTVKESSKEDFQIGDKIIHTKWGEGMIVQVKKSDDGNELVVAF 711 Query: 703 QGQGIKWLVAAYARLESV 720 +G+K L YA ++ + Sbjct: 712 DKKGLKKLNQDYAPIKRI 729 >UniRef50_C7RHP9 UvrD/REP helicase n=3 Tax=Anaerococcus RepID=C7RHP9_ANAPD Length = 731 Score = 870 bits (2249), Expect = 0.0, Method: Composition-based stats. Identities = 265/734 (36%), Positives = 423/734 (57%), Gaps = 25/734 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN QR+AV LLVLAGAGSGKTRVL IA+L+ +N P +I+A+TFTNKA Sbjct: 3 LDGLNKMQRKAVLHDEGPLLVLAGAGSGKTRVLTTSIAYLIEEKNIDPRNIIAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI +L+G +W+GTFH + R+LR + ++F I D+ DQ L+K + Sbjct: 63 ANEMKERISKLLGMDVSHLWIGTFHSICARILRMNIDKIGYDRNFTIYDTSDQKTLIKEI 122 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE--QTWQKVYQAYQEACDRA 184 I + + PR A+ I+S K++ L P + ++Y+ Y+E Sbjct: 123 INELGYKD-DIAPRDALNVISSAKNKSLDPDEFLKLNTYYSKGDIYYEIYKKYEEKKFYY 181 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+ + L++ L Y+++F + VDE+QDTNN QY I+ AG V Sbjct: 182 NALDFDDLIDKVLYLFVRSKETLDFYQKKFEYVFVDEYQDTNNSQYELIKYFAGFHNNVT 241 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQSIY +RGA + NI F DF AETI+LEQNYRST NIL AN LIENN+ R Sbjct: 242 VVGDADQSIYSFRGANISNILNFEKDFKDAETIKLEQNYRSTKNILETANLLIENNSERK 301 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+LWT+ G+ + E +EA+FV++ IK+ G + AILYR+NAQSR E Sbjct: 302 DKELWTENKGGDRVIYKANSVESEEAKFVLDNIKSLMQEGYDAKDFAILYRTNAQSRPFE 361 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L++ + Y++ GG++F++R+EIKD +SYL+++ N DD + +R++N P RGIG+++++ Sbjct: 362 EILMKNLLDYKVVGGLKFYDRKEIKDLVSYLKILVNPKDDLSLKRIINEPKRGIGNKSIE 421 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 +++ + + + + ++ R + ++F + + + + + V Sbjct: 422 ELQRVANLHNIAILDLITDDSFNTLISDRIKKSTEKFYLPLREIFDNVDNYKIVDLIEDV 481 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + SG E + + RI+N+ E +++ ++ N +++ + +L + +L + Sbjct: 482 LDKSGYMKSLESSYSVEDRARIDNINEFISSASEYQENNPEDN---IYDYLENLSLLSDL 538 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + ++ +++ LMT+H+AKGLEFP VF+VG++EG+FP + S+DE G +EEERRL YV +T Sbjct: 539 DKTESTDNSISLMTMHAAKGLEFPVVFVVGLDEGLFPGKRSIDE-GNIEEERRLFYVAIT 597 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG---- 660 RA +KL L+ AE RR YGK V+++PSRFI E+ + E ++ + +++ Sbjct: 598 RAQEKLFLSSAEARRNYGKPVFYKPSRFIDEIIDNIKVEEKISSYGYSSREYEKTMAEDY 657 Query: 661 --------------TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 +D YK+G R+ HAK+G G +V ++ + + L VAF +G Sbjct: 658 MREKTRQSVLGKKLNKTSASDDEYKVGDRIVHAKWGSGMVVQIKKQDKGNELVVAFDEKG 717 Query: 707 IKWLVAAYARLESV 720 +K L YA +E V Sbjct: 718 LKKLNQDYAPIEKV 731 >UniRef50_C6NTI8 ATP-dependent DNA helicase UvrD/PcrA n=2 Tax=Gammaproteobacteria RepID=C6NTI8_9GAMM Length = 729 Score = 869 bits (2245), Expect = 0.0, Method: Composition-based stats. Identities = 381/723 (52%), Positives = 484/723 (66%), Gaps = 25/723 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LND+QREAV P LVLAGAGSGKTRVL+ RIA L+ P I+AVTFTNKAA Sbjct: 20 QLNDQQREAVLLPPGPALVLAGAGSGKTRVLISRIAHLLEE-GVRPAEILAVTFTNKAAR 78 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 MR R+ L+ +W+GTFHG+AHRLLR H LP DFQ+LDS+D RL++R ++ Sbjct: 79 SMRERLAALVQVDLAPLWMGTFHGIAHRLLRRHAEALGLPADFQVLDSDDSQRLVRRALR 138 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 + LDEKQW PR I KDEG P + + +VY+ Y+ +R GLVD Sbjct: 139 ELGLDEKQWTPRALAAQIGRWKDEGWTPAQVPAREVGRWTIPVQVYERYERIKERGGLVD 198 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 FA+LLL A LW IL+HYRERF ++LVDEFQDTN +QY W+R LA G++ +VGD Sbjct: 199 FADLLLYALRLWDQD-GILEHYRERFQHVLVDEFQDTNAVQYTWLRRLAA-HGRLFVVGD 256 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 DDQSIY WRGA+VEN+ RF DFPGA +RLEQNYRS++ IL+AANA+I +N RLGK L Sbjct: 257 DDQSIYAWRGARVENLLRFAEDFPGAALVRLEQNYRSSAPILAAANAVIAHNAERLGKTL 316 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALL 368 WT GEP+ LY A+NE DEARFVV +I+ W GG +CAILYRSNAQSRV EE L+ Sbjct: 317 WTAQDGGEPLELYAAYNEEDEARFVVAQIQQWVAQGGRREDCAILYRSNAQSRVFEEILV 376 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 + +PYR+YGG+RFFER EIKD L+YLRL NR+DDA+FERVVN PTRGIG+ TL+ +R Sbjct: 377 REGVPYRVYGGLRFFERAEIKDVLAYLRLCRNRHDDASFERVVNLPTRGIGNVTLERLRL 436 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDS 488 +R++ L+LWQA + A+ L F+ L+D LA E A L RVI+ + Sbjct: 437 QAREQGLSLWQAAGQA---------ASPKLNAFLTLVDGLAAEIAGDELDAAVQRVIEVT 487 Query: 489 GLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--------EDLMPLQAFLSHAAL 540 GLR Y ++ G++ + R+ENL+EL+ A R +++ EE + L FL+HAAL Sbjct: 488 GLRDWYARD-GDRNEGRLENLDELINAARAYAFVEEREALRELNPDPGNRLSEFLTHAAL 546 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 EAGEG +D W+DAVQLM+LHSAKGLEFP VF+VG+EEG+FP Q SL++ L EERRL Y Sbjct: 547 EAGEGASDAWEDAVQLMSLHSAKGLEFPVVFLVGLEEGLFPHQRSLEDADGLAEERRLCY 606 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 VG+TRAM++L L YAE+RRL+G E PSRF+ +LP + V E+R RA + RPV Sbjct: 607 VGMTRAMRRLVLCYAESRRLHGSERASLPSRFLRDLPSDLVRELRPRARIRRPVVPTATL 666 Query: 661 TPM---VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 +P D Y LG R+RH FGEGT+++ E SG R+QV F G KWL L Sbjct: 667 SPRQGSAARDLPYPLGSRIRHPVFGEGTVLDYEASGRQGRIQVRFA-SGAKWLALGVVAL 725 Query: 718 ESV 720 E + Sbjct: 726 EHL 728 >UniRef50_C1XMD9 ATP-dependent DNA helicase, Rep family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XMD9_MEIRU Length = 706 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 300/726 (41%), Positives = 410/726 (56%), Gaps = 29/726 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LL SLN Q+EAV LV+AGAGSGKTR +VHRIA+L+ P I+AVTF Sbjct: 1 MSDLLSSLNPSQQEAVLHFEGPALVVAGAGSGKTRTVVHRIAYLLRERRVYPAEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+ +++G +WV TFH A R+LR + L F I D +DQ L Sbjct: 61 TNKAAGEMKERLEKMVGRPARDLWVSTFHAAAVRILRTYGEYVGLRPGFVIYDEDDQNTL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKVYQAY 177 LK ++K + L+ K P I+ K+ G + +VY+ Y Sbjct: 121 LKEVLKELELEAK---PGPFRAMIDRIKNRGAGLAEYMREAPDFIGGVPKDAAAEVYRKY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q G +DF +LLL EL+ P +L ++R I VDE+QDTN +QY RLLA Sbjct: 178 QSGLRMQGALDFNDLLLLTIELFEQHPEVLHKVQQRARFIHVDEYQDTNPVQYKLTRLLA 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G+ +M+VGD DQSIYG+R A + NI F D+PGA IRLE+NYRS+S+IL ANA+I Sbjct: 238 GERPNLMVVGDPDQSIYGFRSADINNILDFTKDYPGARVIRLEENYRSSSSILRVANAVI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 E N RL K L GEP+ LY A N +EA FV I G + A+LYR+N Sbjct: 298 EKNALRLEKVLRPTRPGGEPVRLYRAPNAREEAAFVAREIVKL----GNFQQIAVLYRTN 353 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+LEE L +A++P R+ G + FFER+EIKD L+Y R+ N D R+VNTP RG Sbjct: 354 AQSRLLEEHLRRANVPVRLVGAVGFFERREIKDLLAYGRVAVNPADSINLRRIVNTPPRG 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T+ + + ++ T+++A R Q + +Q F+ L+D L + + Sbjct: 414 IGATTVSRLVEHAQKTGTTVFEAFRVAEQVISRP----QQVQAFVRLLDELIEAAFESGP 469 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 RV++ +G R +QE G+ R++N+EEL+ A + + E L FL Sbjct: 470 TAFFQRVLEQTGFREALKQE--PDGEDRLQNVEELLRAAQDWEEEEGGS----LSDFLDS 523 Query: 538 AAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 AL +A E Q D +AV LMTLH+AKGLEFP VF+VG+EE + P + SL LEEE Sbjct: 524 VALTAKAEEPQGDAPAEAVTLMTLHNAKGLEFPTVFLVGLEENLLPHRNSLHRLEDLEEE 583 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA ++L L+YAE R YGK Y RPSRF+ ++P++ ++EV V Sbjct: 584 RRLFYVGITRAQERLYLSYAEERETYGKREYTRPSRFLEDIPQDLLKEVGAFGDSEVRVL 643 Query: 656 HQRMGTPMVEND-SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 Q P + +K G++VRH KFG GT+V G + V F G G+K L + Sbjct: 644 PQARPEPKPRTQLAEFKGGEKVRHPKFGSGTVVAAMGG----EVTVMFPGVGLKRLAVKF 699 Query: 715 ARLESV 720 A LE + Sbjct: 700 AGLERL 705 >UniRef50_Q9CD72 ATP-dependent DNA helicase pcrA n=26 Tax=Actinomycetales RepID=PCRA_MYCLE Length = 778 Score = 866 bits (2238), Expect = 0.0, Method: Composition-based stats. Identities = 283/767 (36%), Positives = 404/767 (52%), Gaps = 49/767 (6%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 +V LLD LN +QR+AV S LL++AGAGSGKT VL RIA+L++ + I+A+T Sbjct: 13 EVDRLLDGLNPQQRQAVVHEGSPLLIVAGAGSGKTTVLARRIAYLIAARSVGVSQILAIT 72 Query: 62 FTNKAAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDAN-LPQDFQILDSEDQ 119 FTNKAAAEMR R+ +L+G G MWV TFH R+LR L +F I D +D Sbjct: 73 FTNKAAAEMRERVARLVGDHTGPSMWVSTFHSTCVRILRNQASLIGGLNSNFSIYDVDDS 132 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH----HIQSYGNPVEQTWQKVYQ 175 LL+ + + M LD K++ PR I++ K+E + ++ S + + +T VY Sbjct: 133 RSLLQMIGQDMGLDIKRYSPRLMANAISNLKNELIDAESAVANLSSDTDDLARTVATVYG 192 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ A +DF +L+ + P I +HYR RF ++LVDE+QDTN+ QY +R Sbjct: 193 EYQRRLRTANALDFDDLIGETVGILQAFPQIAEHYRRRFRHVLVDEYQDTNHAQYVLVRE 252 Query: 236 LAGDTGK----------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 L G + + +VGD DQSIY +RG+ + NI+ F D+P TI LEQNYRS Sbjct: 253 LVGHGARNSPDDMPPGELCVVGDADQSIYAFRGSTISNIEDFERDYPDTTTILLEQNYRS 312 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG- 344 T NILSAAN++I N GR K+LWTD GE I Y + NE DEA+F+ + I G Sbjct: 313 TQNILSAANSVIARNFGRRDKRLWTDAGKGELIVGYVSDNEHDEAKFIADEIDALVGGGE 372 Query: 345 GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDD 404 + A+LYR+N SR LEE + +PY++ GG F+E +EI+D ++YLR++ N D Sbjct: 373 ITYDDVAVLYRANNLSRSLEEVFIPTGIPYKVVGGFCFYESKEIRDLIAYLRVLDNPGDA 432 Query: 405 AAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFM 462 + R++NTP RGIGDR V + + + A + + + K L R+ A+ F+ Sbjct: 433 VSMRRILNTPRRGIGDRAEACVSVYAENTGTSFADALQAVAEGKVPMLNTRSVKAIAGFV 492 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS-- 520 L+D L D L + V++ SG E + R++NL ELV+ +FS Sbjct: 493 ALLDDLRCRVDDD-LGELVESVLERSGYLRELESSTDPQELARLDNLNELVSFAHEFSTE 551 Query: 521 --------------YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA-VQLMTLHSAKGL 565 +E+ D L AFL +L + Q V LMTLH+AKGL Sbjct: 552 QANAAALAKSLHTPEDEDVPDTGALAAFLEKVSLMSDTDQIPENNSGVVTLMTLHAAKGL 611 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 EFP VF+ G E+GM P +L + L EERRLAYVG+TRA Q+L L+ A TR +G+ + Sbjct: 612 EFPVVFVTGWEDGMLPHMRTLGDPTELSEERRLAYVGITRARQRLYLSRAITRSSWGQPI 671 Query: 626 YHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYK------------LG 673 + SRF+ E+P E ++ R T S S + G Sbjct: 672 LNPESRFLREIPPELIDWRRSILTDSYSTPASGASRFGRVRPSSIRSGASKRALLVLAPG 731 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RV H K+G G + + G GE + + F G L+ +A + + Sbjct: 732 DRVTHDKYGLGRVEEVSGVGESAISLIDFGSSGRIKLMHNHAPVTKL 778 >UniRef50_C9LR66 ATP-dependent DNA helicase PcrA n=1 Tax=Dialister invisus DSM 15470 RepID=C9LR66_9FIRM Length = 746 Score = 865 bits (2236), Expect = 0.0, Method: Composition-based stats. Identities = 263/739 (35%), Positives = 422/739 (57%), Gaps = 30/739 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LD+LN++QR+AV +L++AGAGSGKT+ L RIA+++ + P +I+A+TFTN Sbjct: 12 SYLDTLNERQRQAVEQIEGPVLIMAGAGSGKTKALTCRIAYML-EQGIRPQNILAITFTN 70 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN-LPQDFQILDSEDQLRLL 123 KAA EMR R+ L+G +W+ TFH R LR + F I DS+D +++ Sbjct: 71 KAAQEMRERVHHLVGAEADKLWMYTFHSFGARFLRREINNHPPFTDKFTIYDSDDSKQMI 130 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEAC 181 K ++K +NLD+KQ+PPR I++ K+ P ++ N + VY Y + Sbjct: 131 KNILKELNLDDKQYPPRNIQARISAAKNALQGPESFRAEASGNFYNEKIADVYDLYDKYM 190 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 + +DF +LL +L I + +++ F IL+DE+QDTN+ QY + +AG + Sbjct: 191 KQNNALDFDDLLFATTKLL-ADETIRRRWQDHFHYILIDEYQDTNHAQYLMAKYIAGKSQ 249 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGD DQSIY WRGA + NI F D+P A+ I+LEQNYRST IL+AANA+I+NN Sbjct: 250 NICAVGDADQSIYSWRGADLRNIMDFREDYPSAQIIKLEQNYRSTQTILNAANAVIKNNV 309 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQS 360 RL K+LWT+ G + Y A +E +EA F+V +K +N + A+LYR NAQS Sbjct: 310 ERLEKRLWTENNPGVHLQKYAASDEHNEADFIVESMMKEHGENHVPYGKMAVLYRMNAQS 369 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+EE++++ + Y + GG RF++R EI+D L+YL+L+AN DD + R++N P RGIG Sbjct: 370 RVIEESMVKRGIAYTMVGGTRFYDRAEIRDMLAYLKLVANFRDDISLMRIINVPRRGIGQ 429 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T+ + + S+ +++++ L +E + A + LQ+F LI + + + + Sbjct: 430 TTMQKLSEFSKQGNMSMFEGIMSL-EESDIPVPARTKLQKFSALIFSFLNASTEGDVFTL 488 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 +++ D+ ++ +Q + Q+R ENL EL+ + F+ + + L FL AL Sbjct: 489 IQKIMTDTEYLSVLQQSSDPQAQSREENLGELLNVAKDFTQEQPEGG---LPEFLEKVAL 545 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + D V LMT+HSAKGLEFP V++ GM+EG+FP SL + LEEERRL Y Sbjct: 546 VNDVDSFEEQDDKVTLMTIHSAKGLEFPIVYMAGMDEGIFPGVRSLMDETALEEERRLCY 605 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS----- 655 V +TRA +KL LT + R +YG+ + SRF+ E+P + ++E+R ++ ++ + Sbjct: 606 VAITRAKEKLYLTTSAVRTMYGQVKPYVESRFLKEIPVDLLDEIRGNSSEAKRRTLIRSN 665 Query: 656 ---------------HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQV 700 ++ + V+ +++G +V H +G+G + + GSG+H L++ Sbjct: 666 NEQKSKWALSSAGIMNKPVAKKSVKARFDWQVGDKVSHRMWGKGQVAEVTGSGKHMMLKL 725 Query: 701 AFQGQGIKWLVAAYARLES 719 F I+ ++ A+A +E Sbjct: 726 IFPNDQIRQVMVAFAPIEK 744 >UniRef50_A5CU47 ATP-dependent DNA helicase n=4 Tax=Actinobacteria (class) RepID=A5CU47_CLAM3 Length = 816 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 278/789 (35%), Positives = 401/789 (50%), Gaps = 76/789 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL+ LN +QREAV LL++AGAGSGKTRVL HRIA L+ P I+A+TFT Sbjct: 32 DPLLEGLNPEQREAVVYRGPALLIVAGAGSGKTRVLTHRIASLIESREAWPSQILAITFT 91 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEMR R+ L+G + GMW+ TFH R+LR Q+F I DS D L+ Sbjct: 92 NKAAAEMRERVESLLGQASEGMWISTFHSACVRILRREAEAFGFTQNFTIYDSADSRVLI 151 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG---NPVEQTWQKVYQAYQEA 180 KR+IK ++ D + I+ K+E +P E + ++++ Y + Sbjct: 152 KRIIKQLDADTLGFTVSSVSGRISKLKNELSDADTFARTANFNDPAEAMFVEIFRQYTRS 211 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 A DF +L+ + L+ P + Y+ RF ++LVDE+QDTN+ QY+ IR L Sbjct: 212 LASANAFDFDDLIGQTVYLFRAFPKVAALYQRRFRHVLVDEYQDTNHAQYSLIRELTRAV 271 Query: 239 -------------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 D + +VGD DQSIY +RGA + NI F DFP ++ + L Sbjct: 272 APEDVPVDTRMSTNGMGGIDGASLTVVGDSDQSIYAFRGADIRNITEFERDFPQSKVVLL 331 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 EQNYRST NIL+AANA+I NN R KKLWT DG+ I + ++ DEA+FV + I+ Sbjct: 332 EQNYRSTQNILTAANAVISNNFDRKDKKLWTSIGDGDKIVGFTGYSGHDEAQFVADEIQK 391 Query: 340 WQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 + G A +E A+ YR+NAQ+R LEE L+++++PYRI GG +F+ER EIKDA++YL +A Sbjct: 392 LHEEGTAYSEIAVFYRTNAQTRALEEILIRSAVPYRIMGGTKFYERAEIKDAMAYLVAVA 451 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N D A R++NTP RGIG T + + +T +A R E L + A+ Sbjct: 452 NPADVLALRRILNTPKRGIGPATETALANFAESHGVTFREAMRRA-SELGLGPKVTQAIL 510 Query: 460 RFMELIDALAQETA------DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV 513 ++D +A + +++ SGL K + + R EN+EELV Sbjct: 511 ALSRMLDEVALLLDPDRPEGRTSVGDLVTTLLEKSGLVQALRASKDAQDEARAENVEELV 570 Query: 514 TATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIV 573 T++FS N + L FL+ +L A + D V LMTLH+AKGLE+ VF+ Sbjct: 571 AVTKEFSRNNPEG---QLVDFLTEVSLVAAADELDDSSGTVSLMTLHTAKGLEYDSVFLT 627 Query: 574 GMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 G+EE + P +MS +E G EERRL YVG+TRA ++L ++ A TR +G+ PSR++ Sbjct: 628 GVEEDLLPHRMSANEPGGPAEERRLFYVGITRARRRLFISLAMTRAQFGEVNVAMPSRYL 687 Query: 634 GELPEECVEEVRLRATV-----------------------------------------SR 652 E+P E ++ + Sbjct: 688 QEIPAELIDWKQSPGMATSRGGTQPRALNARREGGGYGGRSRSSSGFEDPALPPPPRPKT 747 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLV 711 ++ G D G R+RH FG+G + + G G +V F G G K L+ Sbjct: 748 QWANTVTGQVRDNGDLELAFGDRIRHTDFGDGRVTGVTGEGRKRIAEVQFDGPAGRKRLL 807 Query: 712 AAYARLESV 720 A +E + Sbjct: 808 IKIAPIEKL 816 >UniRef50_Q0AHY9 ATP-dependent DNA helicase UvrD n=16 Tax=Betaproteobacteria RepID=Q0AHY9_NITEC Length = 748 Score = 861 bits (2225), Expect = 0.0, Method: Composition-based stats. Identities = 363/753 (48%), Positives = 472/753 (62%), Gaps = 40/753 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LL LN +Q EAV P + L+LAGAGSGKTRVL RIA+L+ P +++AVTF Sbjct: 1 MTALLTDLNPEQLEAVTWPHQSALILAGAGSGKTRVLTTRIAYLLQSGLTQPQNLLAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM RI ++ + GMW+GTFHGL HR+LRAH+ DA LPQ FQILD DQL + Sbjct: 61 TNKAAREMVARISTMLPINIRGMWIGTFHGLCHRMLRAHYEDAGLPQAFQILDMADQLAV 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 +KR++K +LDEK PRQ W+IN+ K+EGLR + + G+ +T + YQ Y+ Sbjct: 121 IKRILKERSLDEKVLAPRQLQWFINNAKEEGLRASQVDTRGS-FNRTLAECYQVYEAVSM 179 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---- 238 R G VDFAELLLR +EL + HYR RF +ILVDEFQDTN +QY WI+LLAG Sbjct: 180 RGGTVDFAELLLRCYELLSRNEILRDHYRGRFEHILVDEFQDTNRLQYQWIKLLAGSGSQ 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGDDDQSIY +RGA V N++ DF + IRLEQNYRS NIL AANALIE Sbjct: 240 QHAAIFAVGDDDQSIYAFRGAHVGNMRDLEKDFSVPKIIRLEQNYRSQGNILDAANALIE 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN GRLGK LWT GE + +Y A ++DE F+V+ IK G +L+E A+LYRSNA Sbjct: 300 NNKGRLGKNLWTAAGKGESVRIYYAATDVDETSFIVDEIKALHAEGLSLSEIALLYRSNA 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRVLE L AS+ YR+YGGMRFF+RQE+K AL+YLRL+A+ +DD A RV+N P RGI Sbjct: 360 QSRVLEHGLFNASISYRVYGGMRFFDRQEVKHALAYLRLVASPDDDNALLRVINFPPRGI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKA----LAGRAASALQRFMELIDALAQETAD 474 G RTL+ ++ + +LWQA ++ + + + + F+ L+ ++ Q Sbjct: 420 GARTLEQLQDQAEILGTSLWQAALKVCEGRKAVTTRGDQPGRGIAGFVNLVLSMQQACEG 479 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 PL RV+ SGL Y+ E+ E R+ENL+ELV A F + ED+ L AF Sbjct: 480 QPLPEIIRRVVDQSGLVAHYQAER-EGNNERLENLKELVNAATSFVHEAEDD---SLTAF 535 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L+HA+LE GE QA+ +QDAVQLMT+H+AKGLEF VFI G+EEG+FP + S +E LEE Sbjct: 536 LAHASLEGGEHQAEGYQDAVQLMTVHAAKGLEFHSVFISGLEEGLFPHENSRNEPNGLEE 595 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV---- 650 ERRL YV +TRA Q+L L+YAE+R L+G+ + PSRF+ E+PEE ++ +R Sbjct: 596 ERRLMYVAMTRARQRLYLSYAESRMLHGQVRVNVPSRFVDEIPEELLKRLRSSGFSGAGY 655 Query: 651 -----------------------SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 PVS P N +G +GQ+V H KFG GTIV Sbjct: 656 RQGLSGTGQNTVSTAYSRQGRGKHTPVSAAVRVAPQGLNTAGLHIGQQVSHTKFGTGTIV 715 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 N EG+G R+QV F G KWL YA+L + Sbjct: 716 NYEGNGSDMRVQVNFHQTGTKWLSLTYAKLVPL 748 >UniRef50_C8XDJ8 ATP-dependent DNA helicase PcrA n=2 Tax=Actinomycetales RepID=C8XDJ8_NAKMY Length = 864 Score = 860 bits (2224), Expect = 0.0, Method: Composition-based stats. Identities = 287/822 (34%), Positives = 407/822 (49%), Gaps = 114/822 (13%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN QREAV + LLV+AGAGSGKTRVL RIA+L++V P I+A+TFTN Sbjct: 34 ELLDGLNPPQREAVEHRGAPLLVVAGAGSGKTRVLTRRIAYLLAVGGAQPGEILAITFTN 93 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ R+ L+G MWV TFH + R+LRA L F I D D RL + Sbjct: 94 KAAREMKDRVTDLVGGRGRSMWVSTFHSMCVRILRAEATQIGLKTTFTIYDQADSQRLAQ 153 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDR 183 + +N+D K++P R I++ K+E + P ++ + KVYQ YQE Sbjct: 154 LVAGGLNIDTKKYPARMLAASISNLKNELIDPETALERADSDQATLVAKVYQGYQERLRA 213 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK- 242 A +DF +L+++ L P + +HYR RF ++LVDE+QDTN+ QY ++ L G T Sbjct: 214 ASALDFDDLIMQTVFLLQRHPAVAEHYRRRFRHVLVDEYQDTNHAQYLLVKALVGGTADE 273 Query: 243 ----------------------VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLE 280 +++VGD DQSIY +RGA + NI F D+P A+TI LE Sbjct: 274 QEVRTADGELVRAAASEVPPAELVVVGDADQSIYAFRGATIRNIVEFERDYPNAQTIMLE 333 Query: 281 QNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW 340 QNYRST ILSAAN++I N R K LWT G I+ Y NE DEA+FV I Sbjct: 334 QNYRSTQTILSAANSVIARNPQRRAKNLWTAQGGGTRITGYVGDNEHDEAQFVGKEIDAL 393 Query: 341 QDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 D G A + A+ YR+N+ SR LE+ ++ MPYRI GG+RF+ER+E+KDAL+YLR +A Sbjct: 394 VDAGEAVFGDVAVFYRTNSASRSLEDVFIRNGMPYRIVGGVRFYERKEVKDALAYLRAVA 453 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N +D+ R++NTP RGIGDR V + ++ +A + + LA R+A++L Sbjct: 454 NPDDEINLRRILNTPRRGIGDRAEACVSVFAERERIGFGEALQRTGEIPGLAARSANSLS 513 Query: 460 RFMELIDALAQETA-DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ 518 F EL+ L E M V++ +G R E + + +R+ENL++LV+ R+ Sbjct: 514 SFAELLAGLRSEVGFGMEPADLLTAVLERTGYRAELENSEDPQDGSRLENLDQLVSVLRE 573 Query: 519 F-------------------------------------SYNEEDEDLMPLQAFLSHAALE 541 + + L A L +L Sbjct: 574 TTETLLAGGGLAALGLAADAGPEPGDGADAPAEPGPSADEDVPPDAGDLLLAVLEQLSLV 633 Query: 542 AGEGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + V LMTLH+AKGLEFP VF+ G E+G+FP Q +L + L EERRLAY Sbjct: 634 ADADSVPDSAEGMVTLMTLHTAKGLEFPVVFVTGWEDGIFPHQRALGDDSELAEERRLAY 693 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA------------ 648 VG+TRAM++L +T A R +G+ + SRF+ ++P E +E R A Sbjct: 694 VGITRAMKRLYVTRAMMRSAWGQPAANPASRFLDDIPAELIEWRRTDADARAGGFIGDSD 753 Query: 649 --------------------------------------TVSRPVSHQRMGTPMVENDSGY 670 +R T Sbjct: 754 FEGDYGYGRFGGRSGSRFGSGSGFGGRSAPVTASRFGSNSPSRAGARRGPTLGARPALEL 813 Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 +G RV H K+G G ++ ++G+G+ + + F G L+ Sbjct: 814 AVGDRVSHDKYGLGKVLAVDGAGQRATATIDFGAAGKVRLML 855 >UniRef50_Q1PY53 Strongly similar to ATP-dependent DNA helicase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY53_9BACT Length = 729 Score = 860 bits (2223), Expect = 0.0, Method: Composition-based stats. Identities = 288/734 (39%), Positives = 413/734 (56%), Gaps = 25/734 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ + DKQREA+ LL++AGAGSGKTRV+ RI +LMS SPY+I+A+TFTN Sbjct: 2 KFLEDVTDKQREAITHIDGPLLIVAGAGSGKTRVITRRIGYLMSE-GISPYNILAITFTN 60 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM R+ + +S GMWV TFH + R+LR +DF I D+ DQL +K Sbjct: 61 KAANEMAERVKKF--SSHKGMWVSTFHKMCSRILRKDIELLGYSKDFTIYDTVDQLNRIK 118 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEACDR 183 ++ + +D W PR + I++ K++ + + + Q K+Y+ Y Sbjct: 119 SIMADLEIDTAHWKPRSIISSISNAKNKLIDHERFAATASDIYHQMVAKIYKKYDTMLKS 178 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 +DF +LL++ EL +P +L Y+ERF IL+DE+QDTN +QYA RLLA + Sbjct: 179 GNALDFDDLLIKTVELLKIRPDVLSSYQERFKYILIDEYQDTNFVQYAISRLLAQKYKNI 238 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 + GD DQSIYGWRGA + NI F D+P A + LEQNYRST NIL AA+++I+ N R Sbjct: 239 CVTGDPDQSIYGWRGADLRNIMDFEKDYPDARVVLLEQNYRSTKNILLAASSVIQKNKYR 298 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K++WT+ GE I NE EA + I+ + NG E A+ YR+NAQSR L Sbjct: 299 KQKEIWTENEHGEKIKTIHCENEHSEAEEIAKTIRALRGNGIKYTEIALFYRTNAQSRTL 358 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E AL A +PY I GG+ F+ R+EIKD L+Y+RL N DD+A ER +NTP RGIG T+ Sbjct: 359 EIALRNAGIPYVIVGGVEFYRRKEIKDILAYIRLCVNPCDDSALERAINTPARGIGTTTV 418 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 +++ + R+ TL+ A + + G++A+A++RF ELI L + + Sbjct: 419 KKIKEWAESRESTLFNAIGIVDAIHEVTGKSAAAIKRFYELIMVLRHM-PETSVEKTLKS 477 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +I +G + + ++ + RI N+EELV A ++ N D LQ FL AL + Sbjct: 478 IIDKTGYIHFLRKSEEKESEDRIANVEELVNAAHEYDANHTDG---SLQGFLEEVALISD 534 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + +AV LMTLH+AKGLEFP VFI GMEEG+ P S +EEERRL YVG+ Sbjct: 535 LDTVEDLAEAVTLMTLHTAKGLEFPVVFISGMEEGLLPHSESRISEEEIEEERRLCYVGI 594 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT-- 661 TRAM++L LTY + R YG+ + SRF+ E+ +C++ + + + Sbjct: 595 TRAMKRLFLTYTKRRMRYGQLIPCVASRFLDEIHADCMDRLDKTENHFSYEYQGKSNSWE 654 Query: 662 ---------------PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 + N + G+ VRH FG G ++ M+GS E + ++V+F G Sbjct: 655 NDAVEACDVLSESDVFLSGNVRTFLNGEVVRHPVFGIGRVLEMQGSNEKASVKVSFNIGG 714 Query: 707 IKWLVAAYARLESV 720 K L+ AYA+LE V Sbjct: 715 TKNLMLAYAKLEKV 728 >UniRef50_A1TNG2 ATP-dependent DNA helicase UvrD n=11 Tax=cellular organisms RepID=A1TNG2_ACIAC Length = 818 Score = 860 bits (2222), Expect = 0.0, Method: Composition-based stats. Identities = 349/796 (43%), Positives = 480/796 (60%), Gaps = 90/796 (11%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 LL +LND+Q AV P + L+LAGAGSGKTRVL RIAWL+ SP SI+AVTFTNK Sbjct: 31 LLQNLNDEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAWLLQNGYASPGSILAVTFTNK 90 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R+ ++ + GMW+GTFHGL +RLLRAHH A LP FQILD++DQL +KR Sbjct: 91 AAKEMTARLSAMLPVNVRGMWIGTFHGLCNRLLRAHHKSAGLPATFQILDTQDQLSAVKR 150 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 L K N+DE+++PP+Q ++I+ K+EGLRP + + + ++YQ Y+E C R G Sbjct: 151 LCKQFNIDEERFPPKQMAYFISGCKEEGLRPGDVDARDADGRKKV-ELYQLYEEQCQREG 209 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD------ 239 +VDF EL+LR++EL + I HY+ RF +ILVDEFQDTN +QYAW++ +AGD Sbjct: 210 VVDFGELMLRSYELLRDNDPIRAHYQRRFQHILVDEFQDTNKLQYAWLKQIAGDVVDGRL 269 Query: 240 --TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V+ VGDDDQSIY +RGA+V N+Q F+ +F I+LEQNYRS SNIL +ANALI Sbjct: 270 VTHGSVLAVGDDDQSIYAFRGARVGNMQDFVREFDVRHQIKLEQNYRSYSNILDSANALI 329 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRS 356 +N+ RLGK L T GEP+ +Y A +L EA+++V+ I+ +++G E A+LYRS Sbjct: 330 SHNSRRLGKNLRTTQGPGEPVRVYEAPTDLAEAQWMVDEIRQLARNDGFERREIAVLYRS 389 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSRV+E AL A++PYR+YGG+RFFER EIK AL+YLRL+ N +DD +F RVVN P R Sbjct: 390 NAQSRVIESALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENPHDDTSFMRVVNFPPR 449 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG RT++V++ +R +L A A+ G+A + L F+ ++D + ++T Sbjct: 450 GIGARTVEVLQDAARQAGCSLHDAV------SAVPGKAGANLGAFVAMVDVMREQTQGQT 503 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE------------ 524 L ++++ SGL Y E ++G R+ENL+EL+ A F E Sbjct: 504 LRGIIGQMLESSGLVEHYRAE--KEGADRLENLDELINAAESFVTQEGFGRDAVALPVDE 561 Query: 525 ---------------------------------DEDLMPLQAFLSHAALEAGEGQADTWQ 551 E L PL AFL+HAALEAG+ QA Q Sbjct: 562 HGASLRQSPASQGIDPSLPVVDEPLPGGVDADTGETLSPLAAFLTHAALEAGDNQAQAGQ 621 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLT 611 DAVQLMT+H++KGLEF VFI GMEEG+FP + S+ + LEEERRL YV +TRA ++L Sbjct: 622 DAVQLMTVHASKGLEFDAVFIGGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARKRLY 681 Query: 612 LTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ-------------- 657 L++++TR L+G+ Y+ SRF ELPE ++ + + + Q Sbjct: 682 LSHSQTRLLHGQTRYNIKSRFFDELPEAALKWITPKQQGFGSFAPQSGGRGGSAGTPWGG 741 Query: 658 -------------RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 + G ++G V H KFGEG ++++EGSG+ +R QV F Sbjct: 742 FGSGGKSETFASPPVPAQKAPPAHGLRVGLAVFHTKFGEGKVLSLEGSGDDARAQVNFPR 801 Query: 705 QGIKWLVAAYARLESV 720 G KWL + A+L V Sbjct: 802 HGTKWLALSVAKLTVV 817 >UniRef50_UPI0001C3187F UvrD/REP helicase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3187F Length = 746 Score = 859 bits (2221), Expect = 0.0, Method: Composition-based stats. Identities = 294/741 (39%), Positives = 412/741 (55%), Gaps = 27/741 (3%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ LL LN+ QREAV LL+LAGAGSGKTRVL HRIA+L+ P I+A+T Sbjct: 9 DLDALLAGLNEPQREAVVHGEGPLLILAGAGSGKTRVLTHRIAYLVGTGQARPDEILAIT 68 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EMR R+ L+G MWV TFH R+LRA + F I D D R Sbjct: 69 FTNKAAQEMRERVEMLVGRRTRAMWVMTFHSACARMLRADAHRLGYTRQFTIYDQSDARR 128 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEA 180 L+KR I+ +++D K++ P I+ K++ G+ EQT VY+ Y+ Sbjct: 129 LVKRAIEELDVDPKRFTPGAIHHEISDAKNKLRDAEAYAQMVGSFFEQTVADVYKLYESE 188 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 R +DF +LL+RA + P + + Y + F ++LVDE+QDTN++QY W++L+AG+ Sbjct: 189 LHRMNAMDFDDLLVRAVNVLELFPEVRRRYADNFRHVLVDEYQDTNHVQYRWLQLIAGEH 248 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIYG+RGA + NI F +DFP A+ ++LEQNYRST IL AANA+I NN Sbjct: 249 RNLAVVGDDSQSIYGFRGADIRNILDFEDDFPDAKVVKLEQNYRSTQTILDAANAVIRNN 308 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 G+ K+LWTD G+PI + +E EARFV I+ D G + E A+ YR+NAQS Sbjct: 309 RGQREKELWTDLGIGDPIKVRELDDEHAEARFVAGEIERIVDEGVSRNEIAVFYRTNAQS 368 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLE+ L++A + Y++ GG +F+ER EIKDA++YL ++ N D +F R+ N+P RGIG Sbjct: 369 RVLEDTLVRAQIGYQVIGGTKFYERAEIKDAIAYLTMLVNPQDVVSFTRIANSPRRGIGQ 428 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL-HV 479 +L V + +T+W+A E L A + RFM + L + A P Sbjct: 429 TSLSRVISWANTAGITIWEAALEPDSVPGLGTAARKSFHRFMGAMRILGERAAANPPVSE 488 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS-YNEEDEDLMPLQAFLSHA 538 V+ +SG E ++ + Q RIENLEELV ++ + E+ L FL Sbjct: 489 LLKEVLSESGYLEALEADRTIESQGRIENLEELVNVAAEYDGSVDLREEAPSLAGFLQQI 548 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + V LMTLH+AKGLE+P VF++G EEG+FP Q +++EGG EE R L Sbjct: 549 ALVADADGRRDDEGLVTLMTLHNAKGLEYPIVFLLGCEEGVFPHQRAIEEGGLEEERR-L 607 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ- 657 AYVG+TRAM+ L +TYA TR ++G Y SRF+ E+P + + + Sbjct: 608 AYVGLTRAMRDLYMTYARTRAVFGSRSYGARSRFVDEVPIGLTDRNERPSLGVGSARERA 667 Query: 658 ------------------RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 G Y++G V HA FGEG ++ +E G + Sbjct: 668 TSWSTPLGSGPIPGGGWDSGGGGGGGGGEAYRMGDDVVHAAFGEGVVIAVESGG---IVV 724 Query: 700 VAFQGQG-IKWLVAAYARLES 719 + F G + LVA A +E Sbjct: 725 IRFARDGSERKLVADLAPIEK 745 >UniRef50_C0WAB3 ATP-dependent DNA helicase pcrA n=1 Tax=Acidaminococcus sp. D21 RepID=C0WAB3_9FIRM Length = 750 Score = 857 bits (2215), Expect = 0.0, Method: Composition-based stats. Identities = 284/753 (37%), Positives = 431/753 (57%), Gaps = 38/753 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN +Q EAV +L+LAGAGSGKT+ L RIA+L+ + PYSI+A+TF Sbjct: 1 MEDLLSSLNTQQAEAVKHVAGPILILAGAGSGKTKALTTRIAYLL-EKGVPPYSILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQ 119 TNKAA EMR R+ +L+G +W+ TFHG ++LLR F I D+ D Sbjct: 60 TNKAAKEMRERVDKLVGPLAKDVWLYTFHGFCNQLLRREIKHLSHYGYGTGFSIYDTTDC 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQ 178 +LK ++K + +DEK +P M I++ K+ L + + ++Y Y+ Sbjct: 120 KNVLKGILKDLKMDEKFYPLSAVMSVISNAKNAQLSSAAFARKADDFHAKKVAEIYLEYE 179 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + VDF +LLL + +L + + + Y+ +F +++DE+QDTN++QY +L++ Sbjct: 180 KRMRQNNAVDFDDLLLLSVDLLQHDRDVREKYQHKFQYVMIDEYQDTNHVQYLLAKLISA 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGD DQSIYGWRGA + NI F D+P A+ +LEQNYRST IL AANA+IE Sbjct: 240 PENNLCAVGDIDQSIYGWRGADISNILDFEKDYPDAKIYKLEQNYRSTQVILDAANAVIE 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSN 357 +N+ R K LWT+ +G+PI+ + AFN+ +EA F V+ ++ +D L + A+LYR+N Sbjct: 300 HNSARRPKNLWTENGNGKPITYFQAFNDRNEAEFTVHNMRRLRDEAHFHLGDMAVLYRTN 359 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR+ EE L++ +PY + G ++F++R+E+KD L+YLRL+ N D+ A ERV+N P RG Sbjct: 360 AQSRMFEETLIKNGLPYIMVGSLKFYDRKEVKDLLAYLRLLVNGRDEQALERVINEPKRG 419 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T++ ++ + L+L +A + + L GR+ + F L+++L +ET +P+ Sbjct: 420 IGSATVEKLKMLLNETGLSLHEALKAPSAGELL-GRSLLKVTAFSTLLESLRKETDTVPV 478 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ +G E E+ + R++NL+EL + +E+E+ L+ FL+H Sbjct: 479 EQLMTDILEKTGYWDALLLEGSEQARGRMDNLDELKRIAME-FQEDENEEEKTLEDFLNH 537 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + A +DAV LMTLHSAKGLEFP VF+ GMEEG+FPSQ SLD+ +LEEERR Sbjct: 538 VALVSDIDDAKLSRDAVTLMTLHSAKGLEFPVVFMAGMEEGLFPSQRSLDDTDKLEEERR 597 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA +KL LT +R +YG+ V PSRF+ E+P +E + Sbjct: 598 LCYVGITRAKKKLFLTSCRSRMMYGRTVMFPPSRFLEEIPRHLIETALVGQQDGSGAQRA 657 Query: 658 RMGTPMVENDSG------------------------------YKLGQRVRHAKFGEGTIV 687 E SG +K G +VRH +G GT++ Sbjct: 658 AWENRPQEEGSGLRSIARRRGASILDRRDRRSEYVPDGKLEVFKAGDKVRHKAWGVGTVI 717 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + + + ++VAF G GIK L Y ++ V Sbjct: 718 SAQPDADGQIVKVAFPGTGIKALSTKYKVIQKV 750 >UniRef50_C7MAK0 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C7MAK0_BRAFD Length = 932 Score = 857 bits (2214), Expect = 0.0, Method: Composition-based stats. Identities = 304/816 (37%), Positives = 422/816 (51%), Gaps = 100/816 (12%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L++ LN QREAV S LL++AGAGSGKTRVL RIA L+ P I+A+TFTN Sbjct: 117 ELVEGLNPAQREAVEHRGSPLLIVAGAGSGKTRVLTRRIAHLLHSREALPGEILAITFTN 176 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAAAEMR R+G+L+G MWV TFH R+LR A L F I DS D LRL+ Sbjct: 177 KAAAEMRERVGELVGPVARSMWVSTFHSACVRILRRDAAAAGLKSSFTIYDSADSLRLIT 236 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP----HHIQSYGNPVEQTWQKVYQAYQEA 180 + K + LD K+ PR I+S K++ + P +S NP E+T ++Y Y E Sbjct: 237 TIAKDLQLDTKKHAPRALASRISSLKNDLVDPIDFADQAESAKNPFERTLAQIYTNYTER 296 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 +A VDF +L+ L P I + YR RF ++LVDE+QDTN QY +R L G Sbjct: 297 LRQANAVDFDDLIGLTVTLLRENPAIREGYRRRFRHLLVDEYQDTNTAQYQLVRELVGDD 356 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQSIY +RGA + NI F DFP A TI LEQNYRST NIL+AAN++IE Sbjct: 357 PHASLTVVGDSDQSIYAFRGATIRNIIEFEQDFPSARTIVLEQNYRSTQNILAAANSVIE 416 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N GR K LWTD +GE I+LY A +E EAR++ +I D+G + AI YR+NA Sbjct: 417 ENEGRRKKNLWTDQGEGEQITLYVADDEQAEARYIGRQIDALVDDGRRAGDIAIFYRANA 476 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LE+ L++ +PYR+ GG RF+ER+EIKDA++YL+++AN D+ R++N P RGI Sbjct: 477 QSRALEDQLIRIGLPYRVVGGTRFYERREIKDAIAYLQVLANPADEINLRRILNVPKRGI 536 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPL 477 GDR V + ++ +A R + +A R+ +A++ F+ +++ L Q AD Sbjct: 537 GDRAEAAVAMLAERERIGFGEALRRAEEAPGIATRSLNAVRTFVAMLEDLQQMAADGDGP 596 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVT----------------------- 514 + +++ SG + + ++R+ENL ELV+ Sbjct: 597 AELLEAILQRSGYYAELQGSDDPQDESRLENLAELVSVAAEFEAQAEEEDALASEYEDEA 656 Query: 515 ------------------------ATRQFSYNEEDEDLMPLQA-FLSHAALEAGEGQADT 549 + D+ L FL +L A Q Sbjct: 657 DAPATDTPGTEAPETEAPGAPGADIAPDAALTAPDDPEASLVDRFLEKVSLVADADQIPG 716 Query: 550 WQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 +D V LMTLH+AKGLEFP VF+ GME+G FP +L + LEEERRLAYVG+TRA + Sbjct: 717 EEDQFVTLMTLHTAKGLEFPVVFLTGMEDGTFPHNRTLSDPEELEEERRLAYVGITRARE 776 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL---------------------- 646 KL LT A+ R L+G+ + SRF+ E+PE ++ R Sbjct: 777 KLFLTRAQMRALWGQTQFMPASRFLDEVPESVLDVARAGSTLSGAGFGGGYGSGGYGGGS 836 Query: 647 ---------------------RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 R+ + RP E +G R+ H FG GT Sbjct: 837 YGGQGSGSRRGPSFSGGIGGGRSDIKRPSLGSGRKATPAEKLPQLVVGDRITHDSFGMGT 896 Query: 686 IVNMEGSGEHSRLQVAFQG-QGIKWLVAAYARLESV 720 + + G GE ++++V F+ G K LV YA + + Sbjct: 897 VTEVAGQGEKTQIEVQFKAPHGTKRLVLRYAAVTKL 932 >UniRef50_B3EU74 UvrD/REP helicase n=4 Tax=Bacteroidetes RepID=B3EU74_AMOA5 Length = 757 Score = 855 bits (2210), Expect = 0.0, Method: Composition-based stats. Identities = 277/750 (36%), Positives = 409/750 (54%), Gaps = 39/750 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD LN++QR+A +++AGAG+GKT+VL RIA+L+ + P+ I+A+TFTNKA Sbjct: 5 LDMLNEQQRQAAVNTEGPCMIIAGAGAGKTKVLTTRIAYLIQEKKVDPFKILALTFTNKA 64 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI Q++G + +W+GTFH +LLR P F I D+ D LLK + Sbjct: 65 ANEMKKRIEQVIGPAAKNVWLGTFHSCFAKLLRIEADKIGYPSSFSIYDTTDSKSLLKSI 124 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-------QSYGNPVEQTWQKVYQAYQE 179 IK MNLD+K + P + I+S K+ + Q ++ ++Y Y + Sbjct: 125 IKEMNLDDKTYTPNTVLSRISSAKNRLITAQEYINNPIYQQDDEEAMKPKVGEIYVQYAK 184 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C +AG +DF ++LL + L IL Y+ERF IL+DEFQDTN QYA ++ LAG Sbjct: 185 RCLQAGAMDFDDILLNTYLLLNQHLDILYKYQERFQYILIDEFQDTNLAQYAIVKDLAGI 244 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDD QSIY +RGA + NI F D+P I+LEQNYRST NI+ AAN +I N Sbjct: 245 HKNICVVGDDAQSIYAFRGANIRNILNFEKDYPNLTIIKLEQNYRSTQNIVEAANGIIRN 304 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNA 358 N +L K +WT GE I L A + +E R V I + N + AILYR+N+ Sbjct: 305 NQLQLKKNVWTANEKGEVIGLIRATTDAEEGRLVAASIFEIKMQNQLRNEDFAILYRTNS 364 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR +EEAL + ++PYR+ GG F++R+E+KD L+YLR I N ND+ A +R++N P RGI Sbjct: 365 QSRAIEEALRKINLPYRMLGGTSFYQRKEVKDLLAYLRFIVNHNDEEALKRIINEPKRGI 424 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G ++ + + D + LW+ L+GR A A++ F +I A+A + + Sbjct: 425 GPSNIEKMVVAASDHGIPLWEVMCNAKNF--LSGRVAEAVEEFAHMIQAMALDLTKKDAY 482 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + K SGL ++K +G R EN++EL++ + F+ N E D L FL Sbjct: 483 EIASEIAKRSGLLKSLYEDKTVEGLARYENVQELLSGIKAFTANPEQVD-TSLATFLQDV 541 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL + +D + LMT+H+AKGLEF V+IVG+EE +FPS M L LEEERRL Sbjct: 542 ALATNNENEEDGEDKISLMTIHAAKGLEFKYVYIVGIEEDLFPSSMMLGSREDLEEERRL 601 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 YV +TRA +K+ L+Y +R +GK SRFIGE+ + Sbjct: 602 FYVALTRAQKKVFLSYTISRYRFGKLKQCEVSRFIGEIDPVYLHMAHVTNSYTEKSNTNY 661 Query: 643 ------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNME 690 + + + + + S K G +V H FG G ++++E Sbjct: 662 TKQFISSMRITPQQKSVKVKFQAYAQSSKPAFQPSDTSQLKSGMQVEHPTFGIGMVISVE 721 Query: 691 GSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G H + ++AF G K L+ ++A+L+ + Sbjct: 722 LTGTHKKARIAFSESGEKTLLLSFAKLKIL 751 >UniRef50_C6D4S8 ATP-dependent DNA helicase PcrA n=46 Tax=Firmicutes RepID=C6D4S8_PAESJ Length = 785 Score = 855 bits (2210), Expect = 0.0, Method: Composition-based stats. Identities = 273/646 (42%), Positives = 401/646 (62%), Gaps = 12/646 (1%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 ++ + LN QR+AV A LL++AGAGSGKTRVL HRIA+L+ + +P+SI+A+T Sbjct: 6 NIDQAVQKLNPPQRDAVQATDGPLLIMAGAGSGKTRVLTHRIAYLIEKKRVAPWSILAIT 65 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM+ R+ L+G + +WV TFH + R+LR +F ILDS DQL Sbjct: 66 FTNKAAREMQARVAALIGPTGQDIWVSTFHSMCVRILRRDIDRIGFTSNFSILDSADQLS 125 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEA 180 +++ +K +N+D K++ P+ I+ K+E + P + G+ KV++ YQ+ Sbjct: 126 VIRNCMKELNIDVKKFEPKAVQAEISGAKNELITPERYEQKTGDYFTDIVAKVFKMYQKR 185 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF +L++ +L+ P +L+ Y+ +F I VDE+QDTN QY R+LA Sbjct: 186 LKSNNSLDFDDLIMTTIQLFKEMPEVLEFYQNKFRYIHVDEYQDTNRAQYMLCRMLADKH 245 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQSIY WRGA + NI F +D+P A TI LEQNYRS++NIL AANA+I+ N Sbjct: 246 HNICVVGDSDQSIYRWRGADITNILNFEDDYPEARTIMLEQNYRSSANILEAANAVIKLN 305 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 GR KKLWTD +G+ I+LY A +E DE FV I +G + AILYR+NAQS Sbjct: 306 TGRKPKKLWTDQGEGDMITLYQADSEHDEGYFVTGTISKNVKSGRRYDDHAILYRTNAQS 365 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RV+EE L+++ +PY+I GG++F++R+EIKD L+YLRLI+N +DD + +R++N P RGIGD Sbjct: 366 RVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLAYLRLISNPDDDISLQRIINVPKRGIGD 425 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 T+ + + + + +++ L Q L RA L F ++ID L Q + + Sbjct: 426 TTVAKLAEEAVRQGTSIFSVLGNL-QGIDLNARAQGLLHEFRDMIDNLTQMVDYLSVTEL 484 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T++V++ S R ++EK + R+EN++E ++ T F ED+ L AFL+ AL Sbjct: 485 TEKVLEMSQYRIELQREKTLESTARLENIDEFLSVTMDFEKRNEDKT---LVAFLTDLAL 541 Query: 541 EAGEGQ-------ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 A ++V LMT+HSAKGLEFP VFI+GMEE +FP +L++ LE Sbjct: 542 IADIDSMDKDDDGKPADNNSVVLMTMHSAKGLEFPVVFIIGMEESIFPHSRALNDNEELE 601 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 EERRLAYVG+TRA ++L LT A +R L+G+ + PSRF+ E+P+ Sbjct: 602 EERRLAYVGITRAEKQLYLTCARSRTLFGRISANLPSRFLQEVPDN 647 Score = 65.9 bits (160), Expect = 6e-09, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%) Query: 667 DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAAYARLESV 720 D + G +V H K+GEG IV+++G+G LQ+AF G+K L+A +A + V Sbjct: 731 DRNFVAGDKVAHGKWGEGVIVSVKGTGNDMELQIAFPAPVGVKRLLAGFAPITKV 785 >UniRef50_D2R9Y0 Putative ATP-dependent DNA helicase PcrA n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2R9Y0_GARVA Length = 1023 Score = 853 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 274/695 (39%), Positives = 388/695 (55%), Gaps = 40/695 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LLD LN +Q +AV LL+ AGAGSGKTRVL RIAW++S + P I+A+T Sbjct: 136 DAQKLLDGLNPQQSQAVQYDGPALLIGAGAGSGKTRVLTRRIAWILSQKGAWPSQILAIT 195 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR R+ +L+G+ MWV TFH ++LR L F I D+ D R Sbjct: 196 FTNKAAAEMRERLSKLIGSEANTMWVSTFHSACVKILRRSGQYIGLKSGFSIYDTSDCER 255 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPV-------------- 166 L+K + +N+D K++ PR + I+ K+ + + Y N Sbjct: 256 LVKIIATELNVDIKRFTPRSILGKISDCKNSLITWREQLDMYANDYKPGVAGQQIAHAGN 315 Query: 167 -EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDT 225 E + +Y YQ +A VDF +L++R +L P Q+YR +F ILVDE+QDT Sbjct: 316 SEAVYATIYAEYQHRLSQANAVDFDDLIMRTVQLMREVPEAAQYYRHKFRYILVDEYQDT 375 Query: 226 NNIQYAWIRLLAGDT---------------GKVMIVGDDDQSIYGWRGAQVENIQRFLND 270 N+ QY IR LAG + +VGD DQSIY +RGA + NIQ F D Sbjct: 376 NHAQYELIRELAGVDVKQNSANPSQQNNTPASITVVGDSDQSIYAFRGADIRNIQDFEKD 435 Query: 271 FPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEA 330 FP A TI LEQNYRST IL AANA+I +N GR KKLWT G PI+ Y A + EA Sbjct: 436 FPNATTIMLEQNYRSTQTILDAANAVISHNQGRKPKKLWTALGKGTPITGYAADSAQQEA 495 Query: 331 RFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIK 389 +V I + G A ++ AI+YR+NAQSR LE+AL++A +PY++ GG +F+ER+E+K Sbjct: 496 AWVAQEIARLAGEEGVAYSDMAIMYRANAQSRSLEDALVKAGLPYQLVGGTKFYERREVK 555 Query: 390 DALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA 449 DAL+YL+ +AN +DD R++N P RG+G R ++ ++ + ++ WQA L + Sbjct: 556 DALAYLQSMANPDDDVNMRRILNVPKRGLGARAEALLTLYAQTQGVSFWQALEHLESIEG 615 Query: 450 LAGRAASALQRFMELIDALAQETA--DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIE 507 + R A+ L+ F EL+ L D D ++ DSGL ++ + + R++ Sbjct: 616 MPTRTATKLKEFRELMHNLITCMQNDDSKPSKVIDSILNDSGLLEDLQRSEDPQDAARVD 675 Query: 508 NLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQD---AVQLMTLHSAKG 564 NL +L + ++ N D + FL AL A Q + V LMTLH+AKG Sbjct: 676 NLSQLQSVAAEYEQNTPD---ASVAGFLETTALVADSDQLPDENEDTGKVTLMTLHTAKG 732 Query: 565 LEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE 624 LE+P VF+ GME+G FP +L++ G L EERRLAYVG+TRA Q+L +T A R +G+ Sbjct: 733 LEYPVVFLTGMEQGTFPHSRALEDDGELCEERRLAYVGITRAKQRLYVTRAAVRAQWGQA 792 Query: 625 VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 PS+F+ E+P+ ++ R + V R + R Sbjct: 793 QDMLPSQFLDEIPDNLIDWKRRESDVERWGASSRR 827 Score = 66.7 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 32/68 (47%) Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 + M N +++G ++ H +G GT++ + G +S + V F G+K L+ Sbjct: 956 GSTSAVMNKDNHLNIQDFQVGDKITHDTYGLGTVLATQDKGRNSIITVDFGSDGVKRLML 1015 Query: 713 AYARLESV 720 A +E + Sbjct: 1016 RVAPIEKL 1023 >UniRef50_D1VUE5 ATP-dependent DNA helicase PcrA n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUE5_9FIRM Length = 720 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 253/732 (34%), Positives = 403/732 (55%), Gaps = 25/732 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD+ LNDKQ+EA+ LL+LAGAGSGKT+V+ +IA+L+ E + I+A+ Sbjct: 1 MDIDS----LNDKQKEALLYNEGPLLILAGAGSGKTKVVTSKIAYLIENE-VPSWRILAI 55 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+ MW+GTFH + R+LR + + ++ I D DQ Sbjct: 56 TFTNKAAREMRERVAMLIDEDVSPMWIGTFHAICVRILRKNIENLGYGSNYNIYDRADQN 115 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQ 178 ++K K +N++++ + R + I+S K+E L P + + K+Y+ YQ Sbjct: 116 TIIKESYKELNINKEIYNSRTILSKISSWKNEELTPSEVLDGNKEDIFNFNAGKIYEFYQ 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LL++ EL P + + Y+ +F I VDE+QDTN+IQY I+L G Sbjct: 176 NKLKENNALDFDDLLIKTVELLREFPDVREFYQNKFKYIFVDEYQDTNSIQYKLIKLFCG 235 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD+DQSIY WRGA + NI F DFPGA+ I+LEQNYRST NIL AN++I+ Sbjct: 236 KAPNLTVVGDNDQSIYKWRGADISNILNFQKDFPGAKIIKLEQNYRSTQNILDVANSVIK 295 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN L K LWT GE + +E V N+I G + + AILYR+NA Sbjct: 296 NNPQELSKSLWTKRQGGEKVYYKEFSVSNEEEFAVTNKILGLNYKGYSFEDMAILYRTNA 355 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EE+L + + Y+I GG+RF++R E+KD ++YL++I N D+ A R++N P RGI Sbjct: 356 QSRGFEESLSREGINYKIVGGLRFYDRAEVKDIMAYLKVINNPLDEIALLRIINKPKRGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD +++ +R + + L++++ + + + L RA ++ F LI+ L + + + Sbjct: 416 GDSSVEKIRDYAINNNLSMFEVIKNIENYEDLNVRAKKNIKSFANLINLLIERKDLLNVG 475 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + V+ +S + + + +T+I N++EL++ + L +LS+ Sbjct: 476 ELAELVVDESQYVEDLKNQNTLEARTKISNIDELISNIMSYDKE------TSLSDYLSNM 529 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + V LMT+H+AKGLEF VF+VGMEEG+FP ++ EE RRL Sbjct: 530 SLLTDIDKTSDAK-GVNLMTVHAAKGLEFKIVFLVGMEEGLFPIIRQDEDEDIEEE-RRL 587 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE----------CVEEVRLRA 648 YV +TRA L ++ ++TR LYGK SRFI E+ + ++ + Sbjct: 588 CYVAITRAEDLLFISSSKTRYLYGKMTPKIKSRFINEMQDTIEIVEEKNQRLIDVIDYSG 647 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 + ++ + ++ +G +V+H FG+G IV + + V+F+ +G+K Sbjct: 648 KIDERITTYKKVQTPKKSIKSVNVGDKVKHKIFGQGMIVQKKEKNGDIEVVVSFENKGLK 707 Query: 709 WLVAAYARLESV 720 L+ + A +E + Sbjct: 708 KLLLSVAPIEVI 719 >UniRef50_Q04T79 ATP-dependent DNA helicase n=6 Tax=Leptospira RepID=Q04T79_LEPBJ Length = 730 Score = 852 bits (2203), Expect = 0.0, Method: Composition-based stats. Identities = 269/736 (36%), Positives = 399/736 (54%), Gaps = 27/736 (3%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S L LN++Q++AV +L+LAGAGSGKTRV+ HRIA L+ I A+TFT Sbjct: 3 SSFLIGLNEEQKKAVLQITGPVLILAGAGSGKTRVITHRIANLLVNHGID--RICALTFT 60 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEM R+ L+ + + TFH L +LR F + D+ Q LL Sbjct: 61 NKAAAEMVERVKNLVPFLPTNLQIKTFHSLCLYILRREAFFFGFDSAFTVYDTTLQESLL 120 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEAC 181 K+++K ++LD K + P YI+ KD+ L P +T +Y+ Y++ Sbjct: 121 KQVVKDLSLDPKFYKPSMLGNYISGLKDKMLSPETYLEKEGRTDFSKTVSAIYKEYEKRK 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 D DF +L+ + +L+ P + YR ++ ++VDE+QDTN +QY + LLAG+ Sbjct: 181 DANRAFDFGDLIWKTVQLFQKSPDAIAKYRHKWEYVMVDEYQDTNKVQYQLVLLLAGEKR 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIY WRGA + NI F DFP + I+LE+NYRS+SNI+ AA+ +I NN Sbjct: 241 NLCVVGDDDQSIYSWRGADIGNILNFEKDFPESTVIKLEENYRSSSNIILAASKVISNNT 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K+++T+ G P+ L NE +EA V+ RI++ G AI YR+N+QSR Sbjct: 301 QRKQKEIFTNNPKGSPVVLNEFENESEEAHGVITRIRSAYSYGTEYKNIAIFYRTNSQSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 EEAL +PY+I+GG RFF+R EIKD ++YL +++N D + R+VN P RGIGD Sbjct: 361 YFEEALRNLGIPYKIFGGFRFFDRAEIKDFIAYLSVVSNPLDSVSLLRIVNYPPRGIGDS 420 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-MPLHVQ 480 + +R+ S ++ ++L +A + ++ L A S + L L ++ Sbjct: 421 GIGKIREFSLEKGISLLEALGQ--EDIPLKKAAKSKGKELYSLFSDLIEKVEKSSSPSEI 478 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++ SGL + E E+ R+ENL+ELV + ++ N D L+ +L+ +L Sbjct: 479 ALELLNRSGLVSHLRDEGTEESIARLENLQELVNSIEEYEKN---SDSPSLEEYLNQISL 535 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLA 599 E ++ D V LMT+H+AKGLEF VF+ G+EEG FP MSL++ EEERRL Sbjct: 536 ITSEEESKELTDYVNLMTVHNAKGLEFKIVFLSGLEEGTFPHSMSLEDSHFGDEEERRLF 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS---- 655 YV +TRA ++L L+Y T R +GK PSRF+ E+PEEC E R +R Sbjct: 596 YVALTRAREQLFLSYCRTSRKFGKVEDRIPSRFLSEIPEECFVERVSREHTARSPQGAPL 655 Query: 656 -----------HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 + + + K G RVRH +FG GTI + G +++++ + F Sbjct: 656 ASKTRRIEEKFNSGFSSTPDPTNLYLKPGDRVRHKQFGIGTIQTISGKEKNTKVSIRFGN 715 Query: 705 QGIKWLVAAYARLESV 720 K AY LE + Sbjct: 716 V-EKNFFVAYTPLEKL 730 >UniRef50_Q1J014 UvrD/REP helicase n=4 Tax=Deinococci RepID=Q1J014_DEIGD Length = 741 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 277/741 (37%), Positives = 396/741 (53%), Gaps = 32/741 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LL LN Q +A LV+AGAGSGKTR LV+RIA L+ P I+AVTFT Sbjct: 7 SSLLAQLNPNQAQAANHYTGPALVIAGAGSGKTRTLVYRIAHLIGHYGVDPGEILAVTFT 66 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAAAEMR R L+ +W+ TFH R+LRA+ L + F I D +DQL +L Sbjct: 67 NKAAAEMRERARHLV-EGADRLWMSTFHSAGVRILRAYGEHIGLKRGFVIYDDDDQLDIL 125 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-----EQTWQKVYQAYQ 178 K ++ ++ + PR ++ K L P + + P + + Y+ Y+ Sbjct: 126 KEIMGSIPGIGAETHPRVLRGILDRAKSNLLTPADLARHPEPFISGLPREVAAEAYRRYE 185 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +L+ L+ P +L+ ++R I VDE+QDTN QY RLLA Sbjct: 186 ARKKGQNAIDFGDLITETVRLFQEVPAVLERVQDRARFIHVDEYQDTNKAQYELTRLLAS 245 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 +++VGD DQSIY +RGA ++NI F D+ A+ LEQNYRS++ +L+ AN LIE Sbjct: 246 RDRNLLVVGDPDQSIYRFRGADIQNILDFQKDYLDAKVYMLEQNYRSSARVLTIANKLIE 305 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN RL K L DG P+ + A ++ E FV + G ++ A+LYR+NA Sbjct: 306 NNAERLEKTLRPVKEDGHPVLFHRATDQRAEGDFVAEWLTRLHAEGMRFSDMAVLYRTNA 365 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRV+EE+L + +P +I GG+ F++R+EIKD L+Y RL N +DD A R++ P RGI Sbjct: 366 QSRVIEESLRRVQIPAKIVGGVGFYDRREIKDVLAYARLAINPDDDVALRRIIGRPKRGI 425 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD L+ + + +R ++ AC + L R A F L+ A+++ + Sbjct: 426 GDTALERLMEWARVNGTSILTACAHAQELNIL-ERGAQKAVEFAGLMHAMSEAADNDEPG 484 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 VI+ SG + QE G++GQ R+ENLEELV+A ++S E + FL A Sbjct: 485 PFLRYVIETSGYLDLLRQE-GQEGQVRLENLEELVSAAEEWSRENEGT----IGDFLDDA 539 Query: 539 ALEAGEG-------QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 AL + D +DAV LMTLH+AKGLEFP VFIVG EEG+ PS+ +L E G Sbjct: 540 ALLSSVDDMRTKQENKDVPEDAVTLMTLHNAKGLEFPVVFIVGTEEGLLPSKNALLEPGG 599 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP-------------E 638 +EEERRL YVG+TRAM++L LT A+ R YGK + SRF+ E+ + Sbjct: 600 IEEERRLFYVGITRAMERLFLTAAQNRMQYGKTLATEDSRFLEEIKGGFDTVDAYGQVID 659 Query: 639 ECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 + + + T + Y+ G++VRH KFGEG ++ + G G+ + Sbjct: 660 DRPKSWKEYRPTESARPGAVKNTSPLTEGMAYRGGEKVRHPKFGEGQVLAVAGLGDRQEV 719 Query: 699 QVAFQGQGIKWLVAAYARLES 719 V F G K L+ +A L Sbjct: 720 TVHFPSAGTKKLLVKFANLTR 740 >UniRef50_D2NR24 Superfamily I DNA and RNA helicase n=17 Tax=Bacteria RepID=D2NR24_9MICC Length = 985 Score = 851 bits (2199), Expect = 0.0, Method: Composition-based stats. Identities = 278/674 (41%), Positives = 375/674 (55%), Gaps = 46/674 (6%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D + L LN++Q EAV S LL++AGAGSGKTRVL HRIA+L++ +P I+A+T Sbjct: 135 DPASLTAGLNERQEEAVLHSGSPLLIVAGAGSGKTRVLTHRIAYLLATHRATPGQILAIT 194 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR RI L+G MW+ TFH R+LR L F I DS D R Sbjct: 195 FTNKAAAEMRERIEALVGPRAKHMWISTFHSFCVRVLRREAAALGLKSTFTIYDSTDSQR 254 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQ 178 LL +IK +NLD K++ + I++ K+E + + NP E+T ++Y Y Sbjct: 255 LLSLIIKELNLDTKKFTAKAVGNRISALKNELVSAEAYASRVASDNPYEKTIAQIYTVYT 314 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + A +DF +L+ R L P I +YR +F +ILVDE+QDTN+ QY +R L G Sbjct: 315 QRLRAANSLDFDDLIGRTVFLLKKFPEIANYYRRKFRHILVDEYQDTNHAQYQLVRELVG 374 Query: 239 DT----------------GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQN 282 ++ +VGD DQSIY +RGA + NI F D+P A TI LEQN Sbjct: 375 AHVKAPADRGPYPDAVPPAELTVVGDSDQSIYAFRGADIRNITDFEKDYPNAHTILLEQN 434 Query: 283 YRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD 342 YRST NILSAANA+IE N R KKLWT G I Y A +E EARF+ I D Sbjct: 435 YRSTQNILSAANAVIERNPDRRPKKLWTASGAGAKIIGYVAESEHAEARFITREIDRLAD 494 Query: 343 N-GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANR 401 G + AI YR+NAQSR LE+ L++A +PYR+ GG RF+ER+EIKDAL+YLR ++N Sbjct: 495 EHGVQPGDVAIFYRTNAQSRTLEDMLMRAGLPYRVVGGTRFYERKEIKDALAYLRALSNP 554 Query: 402 NDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRF 461 +DD R++N P RGIG ++ VV + +++ + A R+ L A F Sbjct: 555 DDDVNVRRILNEPKRGIGAKSESVVADYATAHRISFFAAARQAADVPGLGAAAVKKYAEF 614 Query: 462 MELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + L+D LAQ P + V++ +G K + ++R+ENL EL+ A +F Sbjct: 615 VRLMDDLAQIARTEPAATCLEAVLEQTGYLAALRASKDIQDESRVENLSELLDAMVEFET 674 Query: 522 NEEDEDLMPLQAFLSHAALEAGEGQADTWQDA-----------------------VQLMT 558 D L+ FL H AL A + V LMT Sbjct: 675 ENPGAD---LEQFLEHVALVADADSIPNRPASAEGESASAAQIAAEAAEAKAQGMVTLMT 731 Query: 559 LHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETR 618 LH+AKGLEFP VF+ GME G+FP Q +L + + EERRLAYVG+TRAM++L LT +ETR Sbjct: 732 LHTAKGLEFPVVFLTGMEHGLFPHQRALTDEKEMSEERRLAYVGLTRAMERLYLTRSETR 791 Query: 619 RLYGKEVYHRPSRF 632 ++GK ++ PS F Sbjct: 792 TMWGKSQFNPPSPF 805 Score = 69.7 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + +G VRH KFGEG ++ +EGSG+ + +V F + K L+ YA LE V Sbjct: 927 HQSKEIPTLAVGDTVRHTKFGEGRVLAVEGSGDKTVAKVRFGSE-EKRLLLRYAPLEKV 984 >UniRef50_C7H111 ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H111_9FIRM Length = 753 Score = 848 bits (2192), Expect = 0.0, Method: Composition-based stats. Identities = 284/747 (38%), Positives = 407/747 (54%), Gaps = 34/747 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S +L SLND Q++ LLVLAGAGSGKT+++ HR+A+L+ +N P +I+AVTFT Sbjct: 11 SEILKSLNDMQKQGAVTTEGPLLVLAGAGSGKTKMMTHRMAYLILEKNVDPQNILAVTFT 70 Query: 64 NKAAAEMRHRIGQLM---GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 NKAA EM+ R L+ G S G+W+ TFH +L+ H ++F I + DQ Sbjct: 71 NKAANEMKQRAEFLIHSRGRSLKGLWIKTFHATCLAILKNHAGALGYGENFLIYTASDQK 130 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQ 178 +KR IK + K++P + +I+ K + + P + Y + Q Q+VY+AYQ Sbjct: 131 AAVKRAIKECEISPKEYPVKMFTSFISKCKSQKIVPDEVFDYFDDSFKTQISQQVYEAYQ 190 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +DF +LLL L+ P IL+ Y ERF I+VDE+QDT+++Q+ I LA Sbjct: 191 NVLKANNAMDFDDLLLNTVILFSKYPDILKIYAERFKYIMVDEYQDTSSLQFELINKLAH 250 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQ IY WRGA +ENI F + G + I+LE+NYRST NIL AA+A+I Sbjct: 251 VHKNICVVGDDDQCIYEWRGATIENILSFEKVYKGTKIIKLERNYRSTKNILDAAHAVIS 310 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 NN+ R KKLWT +GE IS+ N EA F+V++I+ + G + AILYR+N Sbjct: 311 NNSKRKEKKLWTGSVEGEKISIEVYENAHAEAEFIVDKIRQAVAEEGKTYKDIAILYRNN 370 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +QSR+ EEAL + +PYRI G+RF+ER EI D L+YLR+ N DD AF R +N P RG Sbjct: 371 SQSRLFEEALKRWDVPYRILSGIRFYERSEIVDMLAYLRVTENPFDDIAFLRCINEPARG 430 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET--ADM 475 +G + L+ V +R+R ++L+ L+ A + F+++I + Sbjct: 431 LGKKALEKVASFARERGISLFAGLLMDECLAELSAAARRGAEEFIKMIKHAQDMLLDENT 490 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELV-TATRQFSYNEEDEDLMPLQAF 534 + +I+ SG + + ++EN+ ELV + + + D++ + L AF Sbjct: 491 RISNVLKYIIETSGYERKLKLADTLESDAKLENIYELVASVADREGSSAGDDEKLTLSAF 550 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L AL + D DAV LMTLHS+KGLEF VFI GMEEG+FPS D G++EE Sbjct: 551 LEEIALISDVDNHDETADAVVLMTLHSSKGLEFNVVFIPGMEEGIFPSGQGDDNPGKIEE 610 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRL YVG TRA ++L L+ A+ RR Y +++Y +PSRF+ E+PEE V+ + A+ Sbjct: 611 ERRLCYVGFTRAKEELFLSAAKWRRHYYEDMYMQPSRFLDEVPEELVKTNVVEASSRDRY 670 Query: 655 SHQRMGTPMVENDSGYKL---------------------GQRVRHAKFGEGTIVNMEGSG 693 + G P+ K G V H KFG G I+ Sbjct: 671 TDGYAGDPIASPFKKIKPVNTVKEKMLTAKPVSEKEFSDGDTVEHDKFGRGLIIAQT--- 727 Query: 694 EHSRLQVAFQGQGIKWLVAAYARLESV 720 +AF GIK L A + V Sbjct: 728 -EKVWVIAFDDGGIKKLAKGIADIRKV 753 >UniRef50_C7M3I8 UvrD/REP helicase n=3 Tax=Bacteroidetes RepID=C7M3I8_CAPOD Length = 789 Score = 847 bits (2190), Expect = 0.0, Method: Composition-based stats. Identities = 276/783 (35%), Positives = 422/783 (53%), Gaps = 64/783 (8%) Query: 1 MD-VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD L+SLN QR AV ++V+AGAGSGKTRVL +RIA LM ++I+A Sbjct: 1 MDTFLKELESLNAPQRAAVLQKDGPIIVIAGAGSGKTRVLTYRIANLMRE-GVDAFNILA 59 Query: 60 VTFTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKAA EM+ RI L+G +W+GTFH + ++LR PQ+F I D++D Sbjct: 60 LTFTNKAANEMKKRIASLVGNNEAKNLWMGTFHSVFAKILRIEADKLGYPQNFTIYDTQD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLR-------PHHIQSYGNPVEQTWQ 171 RL+ +IK M LD+ + ++ I+S K+ + P +++ + Sbjct: 120 SQRLINGIIKEMELDKDIYKYKRIQSRISSFKNSLITVRAYFNNPELMEADAMARQPRLG 179 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 ++YQ Y + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY Sbjct: 180 EIYQEYVDRCFKAGAMDFDDLLLKTNELLNLYPDVLAKYQNRFRYILVDEYQDTNHSQYL 239 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 ++ LA + +VGDD QSIY +RGA + NI F ND+P A+ +LEQNYRST NI+ Sbjct: 240 IVKALADRFHNICVVGDDAQSIYAFRGANINNILNFKNDYPEAKEYKLEQNYRSTKNIVE 299 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAEC 350 AAN++IE+N RL K ++T+ GEPI ++ + + DE RFV + I + + Sbjct: 300 AANSVIEHNKIRLEKVVFTENELGEPIKVHRSPTDADEGRFVASSIFENKMQHQLPNGNF 359 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 A+LYR+N+QSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N ND+ A R+ Sbjct: 360 AVLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDMLAYLRLIINPNDEEALVRI 419 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL--AGRAASALQRFMELIDAL 468 +N P RGIG+ T++ + + + ++++ + + L L F+ +I Sbjct: 420 INFPARGIGETTMEKLTLAANHYKKSIFEIMYNINKLPELHINTTTKQKLTDFVVMILNF 479 Query: 469 AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--E 526 ++V K +GL ++++ +G ++EN+EE++ + F +ED + Sbjct: 480 QALNQKANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGMKDFVEGQEDVAD 539 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L +L AL + D V LMT+H AKGLEFP V++VGMEE +FPS MS+ Sbjct: 540 SRASLSEYLEDVALATDMDKEIGDDDRVALMTIHLAKGLEFPYVYVVGMEEDLFPSAMSI 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV----- 641 LEEERRL YV +TRA ++ LTYAE R +GK PSRFI E+ E + Sbjct: 600 QSRNDLEEERRLFYVALTRAEKQAYLTYAENRYRWGKLSDAEPSRFIEEIDERYLQYLTP 659 Query: 642 --------------------------------------------EEVRLRATVSRPVSHQ 657 EE + + + Sbjct: 660 SISNPNYRYKPLVDRDIFGEVDKSKLRLQKPISGIPPHKNAPIGEEQQKLRKLKPVNALY 719 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + +G +G V H +FG G ++++EG+G + Q+ F+ G+K ++ +A+L Sbjct: 720 NSNSNNKNTYNGLDIGTVVYHERFGRGKVISLEGTGNDKKAQINFETGGLKNILLRFAKL 779 Query: 718 ESV 720 + Sbjct: 780 TII 782 >UniRef50_D1BXF2 ATP-dependent DNA helicase PcrA n=5 Tax=Actinomycetales RepID=D1BXF2_XYLCX Length = 896 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 273/736 (37%), Positives = 377/736 (51%), Gaps = 61/736 (8%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D LLD LN +QR AV S LL++AGAGSGKTRVL HRIA+L++ I+A+ Sbjct: 71 LDPEALLDGLNPQQRAAVEHHGSPLLIVAGAGSGKTRVLTHRIAYLLATGRARAGEILAI 130 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ L+G + MWV TFH R+LR + L F I D+ D Sbjct: 131 TFTNKAAAEMRERVEHLVGPAASRMWVSTFHSACVRILRREYKVLGLRSSFSIYDAADSQ 190 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL+ + + +NLD K++P R I+ K+E + P G + VY YQ Sbjct: 191 RLVTLVTRELNLDPKKYPARGLSNRISDLKNELVTPEDYAEQGEK-DPVLADVYTRYQAR 249 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 +A +DF ++++ L P++ +HYR RF ++LVDE+QDTN+ QY ++ L G Sbjct: 250 LQQASALDFDDIIMTTVHLLQAFPNVAEHYRRRFRHVLVDEYQDTNHAQYVLVKELVGGV 309 Query: 239 -----------------------------------DTGKVMIVGDDDQSIYGWRGAQVEN 263 + G++ +VGD DQSIY +RGA + N Sbjct: 310 VSTGSTTGGGSTTGGGSTTGGGSTAGGGSTAGGDLEPGELTVVGDADQSIYAFRGATIRN 369 Query: 264 IQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCA 323 IQ F D+ A TI LEQNYRST ILSAANA+I N R K+LWT G I Y A Sbjct: 370 IQEFEQDYRDATTILLEQNYRSTQTILSAANAVISRNADRKPKRLWTAAGAGARIVGYVA 429 Query: 324 FNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRF 382 +E EARFV I D+ G + AI YR+NAQSR LEE L++ +PY++ GG RF Sbjct: 430 DDEHQEARFVAEEIDRLGDSDGVRPGDVAIFYRTNAQSRSLEEVLVRVGLPYKVVGGTRF 489 Query: 383 FERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR 442 +ER+EIKDA++YLR +AN +DD RV+N P RG+G+R +V + +++ A Sbjct: 490 YERREIKDAIAYLRALANPDDDVNLRRVLNVPKRGLGERAEALVAGLAERERISFGAALD 549 Query: 443 ELLQEKALAGRAASALQRFMELIDALAQETA-DMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 ++ R + L+ F +L+ L P V+ +G + Sbjct: 550 RAEDVPGMSTRTLNPLRGFRDLMRGLRALVEAGEPPAAILGAVLDRTGYLAELRASDDPQ 609 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA-------- 553 +R+ENL EL +FS + + L FL +L A Q A Sbjct: 610 DASRVENLAELHAVATEFSQTDPEG---SLVDFLERVSLVADSDQIPDEDVADGEAEQEP 666 Query: 554 ------VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 V LMTLH+AKGLEFP VF+ GME+G FP SL + L EERRLAYVG+TRA Sbjct: 667 KVDQGVVTLMTLHTAKGLEFPVVFLTGMEDGTFPHMRSLHDDAELAEERRLAYVGITRAR 726 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVEND 667 ++L L+ A R +G PSRF+ ++PE+ + R + R G Sbjct: 727 ERLYLSRAGMRSAWGMSNEMPPSRFLTDVPEDLWDWRRKE----SSTQYLRGGGSAWGAR 782 Query: 668 SGYKLGQRVRHAKFGE 683 G R + +GE Sbjct: 783 GSGAYGSGARGSSWGE 798 Score = 69.3 bits (169), Expect = 5e-10, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 34/80 (42%) Query: 641 VEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQV 700 + + +T S +G RV H +G G +V++EG+G ++ ++ Sbjct: 817 IGRPKNASTESTGARFGSATPRTDAEIPSLAVGDRVTHDAYGLGKVVSVEGTGPNAVAKI 876 Query: 701 AFQGQGIKWLVAAYARLESV 720 F G K L+ Y+ + + Sbjct: 877 DFGTDGTKRLLLRYSPVTKL 896 >UniRef50_C3QGR5 ATP-dependent DNA helicase n=23 Tax=Bacteroidales RepID=C3QGR5_9BACE Length = 792 Score = 846 bits (2186), Expect = 0.0, Method: Composition-based stats. Identities = 275/792 (34%), Positives = 419/792 (52%), Gaps = 73/792 (9%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-VENCSPYSIMA 59 M+ + +D LN+ Q AV LV+AGAGSGKTRVL ++IA+L+ +P++I+A Sbjct: 1 MN-TNYIDELNESQCAAVTYNDGPSLVIAGAGSGKTRVLTYKIAYLLEQENGYNPWNILA 59 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKAA EM+ RI + +G + +W+GTFH + R+LRA F I D+ D Sbjct: 60 LTFTNKAAREMKERIARQVGMERARYLWMGTFHSIFSRILRAEAQYIGFTSQFTIYDTAD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ------- 171 LL+ +IK M LDEK + P I++ K+ + P + E Sbjct: 120 SKSLLRSIIKEMGLDEKTYKPGVVQARISNAKNHLVTPTGYAANKEAYEGDMAAKMPAIR 179 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 +Y Y + C +AG +DF +LL+ + L+ + P +L Y+++F +LVDE+QDTN Q++ Sbjct: 180 DIYTRYWDRCRQAGAMDFDDLLVYTYILFRDFPDVLTRYQDQFHYVLVDEYQDTNYAQHS 239 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I L + ++ +VGDD QSIY +RGA ++NI F +P + +LEQNYRST I+ Sbjct: 240 IILQLTKENQRICVVGDDAQSIYSFRGADIDNILYFTKIYPNTKVFKLEQNYRSTQTIVC 299 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAEC 350 AAN+LIE N ++ K ++++ GEPI ++ A+++++E V N+I + AE Sbjct: 300 AANSLIEKNERQIRKAVFSEKEKGEPIGVFQAYSDVEEGDIVANKIAELRREYHYGYAEF 359 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+NAQSR+ EEAL + SMPY+IYGG+ F++R+EIKD ++Y RL+ N ND+ AF+R+ Sbjct: 360 AILYRTNAQSRIFEEALRKRSMPYKIYGGLSFYQRKEIKDVIAYFRLVVNPNDEEAFKRI 419 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALA 469 +N P RGIGD T+ + + + ++LW A E L + + LQ F ELI+ Sbjct: 420 INYPARGIGDTTVGKIISAATNHGVSLWAAVCEPLSYGLDINKGTHAKLQGFRELIEGFI 479 Query: 470 QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDED 527 + AD + +I+ SG+ Q+ + +R EN+EELV F EE Sbjct: 480 ADQADKNAYEIGTDIIRQSGIINDVCQDTSPENLSRKENIEELVNGMNDFCALRQEEGNP 539 Query: 528 LMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 + L FLS AL + + V LMT+HSAKGLEF VF+VG+EE +FPS M Sbjct: 540 NVSLTDFLSEIALLTDQDSDKADDGEKVTLMTVHSAKGLEFKNVFVVGLEENLFPSGMVG 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---- 642 D LEEERRL YV +TRA + L++A+TR YGK + PSRF+ ++ + + Sbjct: 600 DSPRALEEERRLFYVAITRAEEHCYLSFAKTRFRYGKMEFGSPSRFLRDIDVDYLRLPHE 659 Query: 643 ---------------------------------EVRLRATVSRPVSHQRMGTPMVENDSG 669 RP + + Sbjct: 660 AGVSRAVDEGAGRFRREIEGGFARSTSPSRAPFGSNSSEQRERPKAQIIAPSVPRNLKKV 719 Query: 670 YKLG---------------------QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 +G Q + H +FG G ++ +EG+G++++ + F+ G K Sbjct: 720 SAVGGSSSAQMASSGSASVAGVQVGQMIEHERFGLGEVLKVEGTGDNAKATIHFKNAGDK 779 Query: 709 WLVAAYARLESV 720 L+ +AR + V Sbjct: 780 QLLLRFARFKVV 791 >UniRef50_C8WBZ1 UvrD/REP helicase n=7 Tax=Alphaproteobacteria RepID=C8WBZ1_ZYMMN Length = 768 Score = 844 bits (2182), Expect = 0.0, Method: Composition-based stats. Identities = 300/766 (39%), Positives = 421/766 (54%), Gaps = 66/766 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L LN +Q+E V LLVLAGAG+GKT L R+A+L+ P I+AVTFT Sbjct: 17 PDYLARLNPEQKEVVRTTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQILAVTFT 76 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ R+G L+G+ M W+GTFH +A ++LR H L DF ILD++DQ+RL Sbjct: 77 NKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELVGLKSDFIILDTDDQIRL 136 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQEA 180 LK+LI+ +DEKQWP +Q I+ K+ GL P I + + + +Y AYQ+ Sbjct: 137 LKQLIQGQGIDEKQWPAKQLAGIIDRWKNRGLTPDKIAGKEEDSFADGQGAALYLAYQKR 196 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +LLL + +L Y +RF I+VDE+QDTN QY W+RLLA Sbjct: 197 LLSLNACDFGDLLLHMLVILTQHREVLDSYHDRFRYIMVDEYQDTNQAQYLWLRLLAQKN 256 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIY WRGA+V NI RF DFPGA+ IRLE NYRST IL AA+ LI +N Sbjct: 257 RNICCVGDDDQSIYSWRGAEVANILRFEEDFPGAKIIRLEHNYRSTPQILGAASGLITHN 316 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 N RLGK LWT+ GE + + ++ +EAR +V ++ + L + AIL R+ QS Sbjct: 317 NARLGKTLWTERDQGEKVKIIGVWDGAEEARQLVADVQNLRRANIPLNKMAILIRAQFQS 376 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + ++PYRI GG RF+ER EI+DAL+YLR+IA DD AFER+VN P RGIG Sbjct: 377 REFEDIFIAKNLPYRIIGGFRFYERAEIRDALAYLRVIAQPTDDLAFERIVNVPKRGIGK 436 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + ++ + Q + ++ L +A +L+ EK L + +L + M + + + Sbjct: 437 KAMEKLYQAAFLDRIPLAEAAEKLVSEKTLGSKITQSLGQLMNDFSEWRKSLSVVSHADV 496 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 T +++ +SG + M + R+ENL EL A ++ L +FL H +L Sbjct: 497 TRKMLDESGYKAMLRAVNDVQSAGRLENLTELARAMEEYDD---------LGSFLEHVSL 547 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRL 598 + D D + LMT+H+AKGLEF VF+ G EEG+FPSQ SLDEGG LEEERRL Sbjct: 548 VMDH-ENDPIDDKITLMTMHAAKGLEFDHVFLPGWEEGVFPSQRSLDEGGLNSLEEERRL 606 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE--------------- 643 AYVG+TRA + T+ +A RR+YG+ + PSRFI ELP++ +EE Sbjct: 607 AYVGITRAKKCCTIFHAANRRVYGQWIASTPSRFISELPDDHIEEKSLLRKKAPIWRDIW 666 Query: 644 ------------------------------VRLRATVSRPVSHQRMGTPMVENDSGYKLG 673 + + S ++ YK+G Sbjct: 667 AEDRSKNPAYNSAKEAITPPWQLASRRGAGWQRAQKAAASPSPAVSHPLKKKDSPQYKIG 726 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAF--QGQGIKWLVAAYARL 717 V+HAKFG+G + ++G ++ V F + GIK L++ + L Sbjct: 727 DTVKHAKFGQGVVNEVDGD----KVTVEFHDKDVGIKKLLSQFVSL 768 >UniRef50_C4G2S8 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2S8_ABIDE Length = 768 Score = 844 bits (2181), Expect = 0.0, Method: Composition-based stats. Identities = 269/767 (35%), Positives = 415/767 (54%), Gaps = 52/767 (6%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LD+LN +Q++AV LL+LAGAGSGKTRVL RIA+L+ SP++I+A+TFTN Sbjct: 2 NILDNLNPEQKKAVVHENGPLLILAGAGSGKTRVLTRRIAYLIKEYGVSPWNILALTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EMR R+ +L+ +WV TFH ++LR + F I D++D ++K Sbjct: 62 KAAREMRERVDELIEEGAENIWVSTFHSACVKMLRRFIDKIGYDRSFNIYDTDDTKAVVK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACD 182 +++KA+N+D K++P + + I++ K++ + S + +VY Y++ Sbjct: 122 QVLKALNIDNKEFPEKTCLNVISNAKNDFIDAEEFAVNSKFGVDNNVYARVYSEYEKRMK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA----- 237 +DF ++L++ EL+ L++Y+ RF ILVDE+QDTN +Q+ ++LLA Sbjct: 182 NNNALDFDDILVKTVELFQTDKDTLEYYQRRFRYILVDEYQDTNIVQFKLLKLLANYVNE 241 Query: 238 --GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + +VGDDDQSIY +RGA + NI F +P A I+LE+NYRST NIL AAN Sbjct: 242 DGEIENNLCVVGDDDQSIYKFRGADIRNILNFEKIYPNALVIKLEENYRSTGNILEAANG 301 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILY 354 +I NN R K+LWT G IS EA V N + + G ++ A+LY Sbjct: 302 VISNNKERKDKRLWTSKEGGASISYKTYDTGEREANGVANTVLRTVNEGKAKYSDIAVLY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR +EE + +++PY++YGG F+ R+EIKD L+YL+ I N DD R++N P Sbjct: 362 RTNAQSRAIEEKFIYSNIPYKLYGGTNFYSRKEIKDILAYLKTINNPKDDTQVRRILNVP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI-DALAQETA 473 RGIG T D + + +++++ ++AC + L+ RA + +++F+ I + + Sbjct: 422 KRGIGSATEDKIADYALEKEISFFEACMRVQSIPGLS-RAVAKVEKFVAFIGAKIREFKD 480 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + + + + +I++ G + E ++ Q RIEN+EEL+ F +D + L Sbjct: 481 TVCMKAEVEALIEEIGYIEELKLEGTDEAQGRIENIEELINKVAIFELGNQDAGDIKLGN 540 Query: 534 FLSHAALEAGEGQADT---WQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL--DE 588 FL+ +L D+ D V LMTLHSAKGLEF VFIVGMEEG+FPS+M L + Sbjct: 541 FLADVSLATDADNKDSENKDADKVTLMTLHSAKGLEFKIVFIVGMEEGLFPSRMCLFAMD 600 Query: 589 GGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 LEEERRL YVG+TRAM+KL L+ A +R L G ++ PSRFIGE+PE + Sbjct: 601 ESELEEERRLCYVGITRAMEKLYLSNAASRMLRGDVQWNAPSRFIGEIPEHLLSVGGSID 660 Query: 649 TVSRPVSHQRMGTPM-----------------------------------VENDSGYKLG 673 + + + + +G Sbjct: 661 NIRQKRNENLYAGDRNAFSKSAGYQTGGASSDKRNIFSGNPYISKGFGGGIGVSDSVNIG 720 Query: 674 QRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 RVRHAKFG G ++++ + ++ + GI+ + A L+ + Sbjct: 721 DRVRHAKFGAGEVIDLVRENDAVSIKFDNETFGIRKMKLGMAGLKKI 767 >UniRef50_B5YHS6 ATP-dependent DNA helicase PcrA n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YHS6_THEYD Length = 699 Score = 843 bits (2180), Expect = 0.0, Method: Composition-based stats. Identities = 257/717 (35%), Positives = 390/717 (54%), Gaps = 26/717 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN Q+EAV LLVLAGAGSGKTRV+ ++ A+L + P SI VTFTNKA Sbjct: 6 LRDLNPAQQEAVVYCEGPLLVLAGAGSGKTRVITYKYAYLTKSKGLLPSSIFTVTFTNKA 65 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ RI ++ + W+GTFH L R+LRAH + +DF I D +DQ L+KR+ Sbjct: 66 ADEMKERIFKMCNGNWKNTWIGTFHSLCVRILRAHIDNIGYKRDFIIYDDDDQAGLIKRI 125 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACDRA 184 +K +N+ + + + I++ K + P S G E+ ++Y YQ R Sbjct: 126 LKDLNM--HEALCKCVVTKISNLKSNLITPEDYISNIEGYEFEERLGRIYMRYQNELKRY 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L +L+ +L+ Y E+F ILVDEFQDTN QY ++LL + Sbjct: 184 NALDFDDLILCVIKLFNENEDLLRRYSEQFKYILVDEFQDTNKSQYMLLQLLCRYHKNIC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY +RGA + NI F DFP + ++LEQNYRST +I+ A++A+I N R Sbjct: 244 AVGDDDQSIYKFRGANIHNILNFEKDFPDTKIVKLEQNYRSTKHIILASSAMISRNTMRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSRVL 363 K LWT+ GE I NE +EA+++ IK G + AILYR Q+R L Sbjct: 304 PKILWTERDWGEKIFYCQLNNEEEEAKYIAKNIKELYLKGDYEYKDFAILYRLVLQARAL 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EEAL +PY++ G+ F+ R+EIKD L+Y+R I N+ D+ + R++NTP RGIG + Sbjct: 364 EEALRMEGIPYQVISGVSFYHRKEIKDVLAYMRFILNKEDNVSLMRIINTPPRGIGASAI 423 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + ++ ++ ++A + +++E ++ L F+ LID L+++ Sbjct: 424 SKIESEAKKYMISTFEAIKRIIKEDTVSATLKEKLVSFVTLIDELSEKDYKDAAS-MIKD 482 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ +G E++ RI+N+ E +++ + MP++ FL AL + Sbjct: 483 ILNFTGYLEEIEED-------RIQNVLEFLSSAEK----------MPVREFLDKVALFSN 525 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + ++ V L+TLH+AKGLEFP VFI G EEG+ P +L++ L+EERRL YVG+ Sbjct: 526 VDTWENKKNYVSLLTLHAAKGLEFPVVFIAGCEEGILPYFKALEDPFELQEERRLFYVGM 585 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPM 663 TRA L +T + R+LY K S FI ++P E +R + P + + Sbjct: 586 TRAKNLLFITSVKQRKLYSKVQKQETSSFIKDIPPEYCICIRKDYSTFAPNKKEPETS-- 643 Query: 664 VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + + +G +V+H +G G + + G G+ ++ V F G GIK L LE V Sbjct: 644 -KIKPPFVIGCKVKHPTWGVGVVRDCYGEGDDLKVIVNFPGIGIKKLAPKIVNLERV 699 >UniRef50_C5NYN7 ATP-dependent helicase PcrA n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYN7_9BACL Length = 727 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 251/736 (34%), Positives = 412/736 (55%), Gaps = 33/736 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ ++ND Q +A+ ++V+AGAGSGKTRVL +RIA+L+S +N +I+A+TFTN Sbjct: 2 NLVQNMNDNQLKAILKTEGAVMVIAGAGSGKTRVLTNRIAYLISEKNILENNILAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ RI L+G + +W+ TFH + R+LR H ++F ILD+ +Q ++K Sbjct: 62 KAAKEMKERIYALVGETSKYIWINTFHSMCVRILRQHIELLGYNKNFTILDTSEQKSIIK 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQEACDR 183 ++++++L E + P + I++ K+ + ++ + ++Y YQ + Sbjct: 122 NIVRSLDLSEDAYQPANVLKIISNAKNSLVSVKKMREQSRFGFMKNVAEIYAHYQSYLKK 181 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 ++DF +L+L+ L+ P +L Y+ +F I VDE+QDTN IQY I++L+ V Sbjct: 182 NSVLDFDDLMLKTIVLFKKFPEVLAIYQNQFQYIHVDEYQDTNVIQYRLIKMLSAVHKNV 241 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA +NI F DF E + L+QNYRS S IL AANA+I+NN R Sbjct: 242 CVVGDDDQSIYSWRGACSDNIINFEKDFDDVELVFLDQNYRSNSTILDAANAVIKNNTDR 301 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVL 363 K+LW++ G IS+Y A N+ DE + +I + G + AILYR+N SR + Sbjct: 302 KEKELWSENKGGGKISVYAASNDKDETDDIAKKILELKKEGIDYKDIAILYRANYLSRQM 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E + L +PY++ G ++F +RQE++D L+YL +I NR D+ + R++N P RG+G ++ Sbjct: 362 ENSCLSFGIPYKLIGSLKFLQRQEVRDLLAYLNVIVNRADEFSLRRIINVPKRGVGASSM 421 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 D + + + ++L++A + + + ++ + + ++ LI+ ++ + Sbjct: 422 DKIDKYAEQYGISLFEALKNI-EAIGVSKKIVTNIKLLTNLIEKYSE-VERYAIDELIIG 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 + KDSG TM ++ ++RIEN+ ELV++ +QFS L F+S +L + Sbjct: 480 IYKDSGYETMLKESNDPYAESRIENISELVSSAKQFSSMN-----DSLIDFISEMSLTSD 534 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM----SLDEGGRLEEERRLA 599 + +DAV L T+H++KGLE+ VFI+G+EE +FPS S DE ++EEERRLA Sbjct: 535 SD-DENQEDAVVLSTVHASKGLEYKVVFIMGLEENLFPSIRDAESSADEKNKMEEERRLA 593 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE----------------E 643 YV +TRA ++L ++YA R +G ++ SRF+ E+P + + E Sbjct: 594 YVAITRAKERLFMSYANRRMQFGSIKMNKRSRFLDEVPNKLMHFESSFGGSFESTDSNIE 653 Query: 644 VRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ 703 + + P + Y +G V H KFG+G ++N+ ++V F Sbjct: 654 QANKFISKLSPKIKISEKPKSSVSTNYSVGDTVLHKKFGDGKVLNISKDS----VKVEFS 709 Query: 704 GQGIKWLVAAYARLES 719 G+K L+ YA L Sbjct: 710 EVGVKTLLIEYANLTR 725 >UniRef50_B2A5W4 UvrD/REP helicase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A5W4_NATTJ Length = 726 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 265/741 (35%), Positives = 404/741 (54%), Gaps = 37/741 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M VS L LN +Q AV A +LVLAGAGSGKT+VL +RIA+L+ + P I+A+ Sbjct: 1 MVVSSQLAELNQEQTAAVTAGDGPVLVLAGAGSGKTKVLTYRIAYLLETKGIHPEQILAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ ++ WV TFH R+LR +DF I D+ D+ Sbjct: 61 TFTNKAAGEMKERVQTIVEGDAPS-WVSTFHAACVRILRREIDLLGYGKDFLIYDTRDKT 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +++K L+ NLD+K++P + I+ K+ P + + +V++AYQ+ Sbjct: 120 KIVKDLLADFNLDKKKYPHQAVAKKISGVKNNLQDPRELFYPYD-------EVFEAYQKR 172 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LLL L+ P LQ+Y+ +F ILVDEFQDTN Q I LL+ Sbjct: 173 LKKENALDFDDLLLLTLRLFEQYPDRLQYYQNKFQYILVDEFQDTNPAQNRLISLLSPPQ 232 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V +VGDDDQSIY +RGA V+NI F +P A+ +LE+NYRS+ IL AAN ++ NN Sbjct: 233 DNVFVVGDDDQSIYLFRGADVKNILEFEKTYPNAQVYKLEKNYRSSKTILEAANQVVTNN 292 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K+LWTD +G P+ Y A +E DEA F+ I + N L A+LYR+NAQS Sbjct: 293 PSRKSKELWTDNDEGYPLQYYEADDERDEAYFIAEEI---RANRYQLPLIAVLYRTNAQS 349 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLE+ + + Y + GG F++R+E+KD ++YL ++ D+ ER++N P RGIG Sbjct: 350 RVLEDIFRKMGISYEVVGGTGFYDRKEVKDIMAYLMVVQCPQSDSQLERIINEPKRGIGK 409 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++D ++ + +TL+ A E+ ++ R +++++F ++I + + + Sbjct: 410 TSVDKLKDYANRNNITLFDALLEV-DYTDISKRGKNSVKKFTDMIGNFRKMREYLTVREL 468 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V + SG + ++ +TR+EN+ E+ + ++F + LQ FL+H+ L Sbjct: 469 IEEVAEKSGYLEALRSQNTKEAETRMENVREIYSMAKEFEAEGGET----LQEFLTHSTL 524 Query: 541 EAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 D Q V +MTLHSAKGLEFP VF+ G+EEG+FP + D +EEERRL Sbjct: 525 MGDIDTWEDEEQAQVVMMTLHSAKGLEFPGVFLTGLEEGVFPHIRTYDSEASMEEERRLC 584 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC------------------- 640 YVG+TRA Q L LT+A R L G +PSRF+ E+ E+ Sbjct: 585 YVGITRAEQVLYLTWARERTLNGMTRMLQPSRFVSEIGEDLKDTQHQTLSGQGQVTSTQN 644 Query: 641 -VEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 E + + + + + + Y+ G + H K+GEG ++ + +G L Sbjct: 645 SHEPPQTQISSFSDKTSPSGKRNVNLAEESYQEGDLISHKKWGEGKVLQAQQAGSDWVLT 704 Query: 700 VAFQGQGIKWLVAAYARLESV 720 V+F G GIK L A+ A ++ + Sbjct: 705 VSFDGAGIKKLAASVAPIKKL 725 >UniRef50_Q28NL8 ATP-dependent DNA helicase, Rep family n=11 Tax=Rhodobacteraceae RepID=Q28NL8_JANSC Length = 817 Score = 842 bits (2176), Expect = 0.0, Method: Composition-based stats. Identities = 305/792 (38%), Positives = 423/792 (53%), Gaps = 94/792 (11%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +D LN Q AV +L+LAGAG+GKTR L RIA LMS P I+AVTF Sbjct: 27 PQPYMDGLNPAQIAAVNQLDGPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVTF 86 Query: 63 TNKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R+G L+G GM W+GTFH + +LLR H A L +F ILD++DQ R Sbjct: 87 TNKAAREMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRHAELAGLKSNFTILDTDDQTR 146 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEA 180 L+K+LI A +D+K+WP R I+ K+ L P + S + K+Y YQ Sbjct: 147 LMKQLIIAEEIDDKRWPARALGSIIDGWKNRALTPDKVPSADHGAFNHQGVKLYAQYQAR 206 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +LLL +++ + +LQ Y+ F ILVDE+QDTN QY W+RLLA Sbjct: 207 LKALNACDFGDLLLHVIQIFQDNDDLLQQYQRWFRYILVDEYQDTNVAQYLWLRLLAAGH 266 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+ +I N Sbjct: 267 KNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTGHILAAASGVIAGN 326 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-----NGGALAECAILYR 355 GRLGK LWTDG DGE + L ++ +EAR++ I+ AIL R Sbjct: 327 TGRLGKTLWTDGEDGEKVRLIGHWDGDEEARWIGEEIEAMGKGTRGMEPIGPNSIAILVR 386 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 ++ Q R E+ L +PYR+ GG RF+ER EI+DA++Y R++ + +DD AFER+VNTP Sbjct: 387 ASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRVVVSPDDDLAFERIVNTPK 446 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA------ 469 RG+GD+ +++ +R ++L + R ++ +A+ G+ L+ ++ + Sbjct: 447 RGLGDKAQQTIQRMARSNGVSLLEGARLCVETQAIGGKGGRELRTLVDGLARWRIQLTGA 506 Query: 470 -----------------QETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEEL 512 E + + ++ +SG + ++ +K +G R+ENL+EL Sbjct: 507 LRAAGPSDDLIEEDADPSEVPKISHIELAEIILDESGYTSHWQNDKTPEGPGRLENLKEL 566 Query: 513 VTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFI 572 V A F LQ FL H +L Q D V LMTLH+AKGLEFP VF+ Sbjct: 567 VKALENFE---------NLQGFLEHVSLIMDNEQDDQEP-KVTLMTLHAAKGLEFPAVFL 616 Query: 573 VGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPS 630 G E+G+FPSQ S+DE G+ LEEERRLAYVG+TRA + T+++A RR+YG+ PS Sbjct: 617 PGWEDGLFPSQRSMDESGQAGLEEERRLAYVGITRAEEVCTISFAGNRRVYGQWQSQMPS 676 Query: 631 RFIGELPEECVE------------------------------------------------ 642 RFI ELPE+ VE Sbjct: 677 RFIDELPEDHVEVLTPPGLYGHQGSVSATASPVEREMAGSNLHEKAASADVYNSPGWRRL 736 Query: 643 EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 + R +R S + T E S + +G RV H KFG G +V++EG +L + F Sbjct: 737 QARQGQYGTRQPSEAKAMTIDAEAISAFTVGDRVFHQKFGYGEVVSVEGD----KLGIEF 792 Query: 703 QGQGIKWLVAAY 714 G K +V + Sbjct: 793 DKAGSKHVVGRF 804 >UniRef50_B0RZV9 ATP-dependent DNA helicase n=2 Tax=Finegoldia magna RepID=B0RZV9_FINM2 Length = 725 Score = 841 bits (2174), Expect = 0.0, Method: Composition-based stats. Identities = 261/731 (35%), Positives = 402/731 (54%), Gaps = 27/731 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 LD+LND+QREAV +L+LAGAGSGKT+VL +IA+ + CS Y I+A+TFTNKA Sbjct: 4 LDNLNDRQREAVENTDGPMLILAGAGSGKTKVLTTKIAYCLEKGLCSKYEILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM+ R+ ++ + MW+GTFH + R+LR ++F + D DQ+ L+K Sbjct: 64 AKEMKERVENILQENVDSMWIGTFHAICSRILRVEIERIGFERNFTVYDRADQISLVKEC 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQEACDRA 184 +K M +D K + + I+ K+ G +I + +++Q Y+ R Sbjct: 124 LKDMGVDPKNVEIKNEINTISRLKNAGATEKNIDKEDFDISLSTFTMELFQKYEHKLKRY 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+++ + L+ P + + Y +RF + VDE+QDTN+ QY I+ L + Sbjct: 184 NSLDFDDLIVKTNLLFEENPDLREKYSDRFKYVFVDEYQDTNDTQYKLIKNLVSKNDNIC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGD DQSIYGWRGA ++NIQ F DF A+ I LEQNYRST IL AN +I+NN+ R Sbjct: 244 CVGDSDQSIYGWRGANIQNIQNFEKDFKNAKVILLEQNYRSTQPILDLANTVIKNNSLRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K LWT +G+ ++++DEA VV I+ + E AILYR+NAQSR+ E Sbjct: 304 DKNLWTAKNEGDMPIYRRMYSDIDEADQVVQWIEQERYRENPYEEMAILYRTNAQSRLFE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L + +P R+ GG++F++R+EIKD +SYLR++ N ND+ A R++N P RGIG T+D Sbjct: 364 ERLNRLGIPNRVVGGLKFYDRKEIKDCVSYLRIVENLNDNMALNRIINEPKRGIGKTTMD 423 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + Q S++R +++ Q + + A LQ F LI + + M + + + Sbjct: 424 KLLQCSQNRSISMMQYIID-TDLPDFSNATAKKLQEFYYLIKSFPK--DQMNVAELMEYI 480 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + +G R E+ +TR+EN++E V++ QF + D++ L+ +L ++L Sbjct: 481 LDKTGYRANLEKSTNRDDKTRLENIDEYVSSLYQFVQDNPDKN---LREYLETSSLMTDL 537 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + D V +MT+H+AKGLEF VF G+EEG PS++ +EEERRL YV +T Sbjct: 538 DKTDDNTKGVSMMTIHAAKGLEFDVVFFTGLEEGTIPSRV----DEDVEEERRLCYVAIT 593 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR------------ 652 RA +KL +T ++RR + + SRFI E+ + +E + R Sbjct: 594 RARKKLYITSVQSRRRFNEFQTKAESRFIEEMENKYKDESPNKEVSFRESFNTKVVDDYR 653 Query: 653 ---PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW 709 S + + +N+ Y+ G +V H KFG G IV + L + F +G+K Sbjct: 654 TEASASITKKQNNVTKNNEKYRAGDKVSHKKFGTGVIVGIVEKENGDELTINFDKKGLKK 713 Query: 710 LVAAYARLESV 720 L ++ A L V Sbjct: 714 LNSSLAPLTRV 724 >UniRef50_B9KXW3 ATP-dependent DNA helicase pcrA n=2 Tax=Thermomicrobia (class) RepID=B9KXW3_THERP Length = 771 Score = 840 bits (2170), Expect = 0.0, Method: Composition-based stats. Identities = 275/731 (37%), Positives = 397/731 (54%), Gaps = 17/731 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + +L L+ Q AV +LV+AG GSGKTRVL HR+A+L+ P+ I+AVTF Sbjct: 42 MERILIGLDADQCVAVTTTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVAVTF 101 Query: 63 TNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA E+R R+G L+GT + GTFH L R+LR L F I D EDQL Sbjct: 102 TNKAAREIRERLGGLLGTESAQLVQAGTFHSLCVRILRRDGYRIGLEPAFTIYDEEDQLA 161 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+K+ ++ + LD +++ PR + ++ K++ P +QS + ++ +VY+ Y + Sbjct: 162 LVKQALRDLGLDPQRFSPRMLLGRLSRAKNDQHSPSDLQSMAQSYWDEVAARVYERYAQY 221 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 RA VDF +LLLR EL+ P +L HY++R+ + VDE+QDTN +QY +R LA Sbjct: 222 LQRAQAVDFDDLLLRTVELFTEYPDVLAHYQDRWRYLQVDEYQDTNRLQYQLVRQLASGH 281 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD DQSIY WR A + NI F DFP A IRL +NYRST I++AA+A+I N Sbjct: 282 RNLCVVGDPDQSIYSWRQADIRNILEFQRDFPDATVIRLGRNYRSTPQIVAAADAVIRVN 341 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQ 359 R+ + LWT+ G PI L ++E EA VV+ I G + A+LYR NAQ Sbjct: 342 RQRIERPLWTENPPGPPIRLLACWDEQQEAEMVVSEIDRLVRTGNARYRDIAVLYRINAQ 401 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV--NTPTRG 417 SR +EEAL++ +PY++ GG+RF+ER+EIKDAL+ LR++ N D + RV+ RG Sbjct: 402 SRSVEEALVRRQIPYQVIGGVRFYERKEIKDALALLRVLVNPRDWLSLRRVLSETAFGRG 461 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQE----KALAGRAASALQRFMELIDALAQETA 473 IG++TL + Q + +Q + L++E ALA L+ + L Sbjct: 462 IGEKTLLQLEQWGQRQQCSPADVLLLLVEEREEAPALAAATVRRLRELGGELVRLRAAMV 521 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 + P D ++ SGL Y + R ENL +L + ++ L Sbjct: 522 EHPASQLFDLALERSGLAARYRDASDPTERERWENLVQLRSVLERYDTV---PAAEGLPL 578 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL AAL A +A+ D V L+TLH+AKGLEFP VF++G+EEG+ P +L+ LE Sbjct: 579 FLEEAALVAAIDEAEMSGDQVTLLTLHAAKGLEFPVVFLIGVEEGLLPHARALESEAELE 638 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-----EVRLRA 648 EERRL YVG+TRA ++L L+Y +R +G PS F+ +LP + VE R+ Sbjct: 639 EERRLFYVGITRAKERLYLSYCSSRNRFGLRERCLPSHFLDDLPPDVVEAGSRASERVPR 698 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 H + GQRV H FG+G +V + + V F+ G K Sbjct: 699 VAPPAGGHAGPVESSAPVVPRLRAGQRVFHPAFGDGFVVAVREQAGDQEVTVQFKRHGTK 758 Query: 709 WLVAAYARLES 719 L+A+ A+L Sbjct: 759 TLLASLAKLVV 769 >UniRef50_B7AA42 UvrD/REP helicase n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AA42_THEAQ Length = 701 Score = 839 bits (2169), Expect = 0.0, Method: Composition-based stats. Identities = 285/721 (39%), Positives = 393/721 (54%), Gaps = 34/721 (4%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL SLN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFT Sbjct: 9 EALLSSLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLIARRGVFPSEILAVTFT 68 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ R+ ++ G +WV TFH A R+LR + L F + D +DQ LL Sbjct: 69 NKAAEEMKARLKAMV-RGAGELWVSTFHAAALRILRVYGERVGLKPGFVVYDEDDQTALL 127 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQ 178 K ++K + L K P + + + K++G+ P H+ + Y Q V YQ Sbjct: 128 KEVLKELGLAAKPGPIKSLL---DRAKNQGVPPEHLLLELPEFYAGLSRGRLQDVLHRYQ 184 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 EA G +DF ++LL A +L +L+ R+R I VDE+QDTN +QY + RLLAG Sbjct: 185 EALRAQGALDFGDILLYALKLLEEDGEVLKRVRKRARFIHVDEYQDTNPVQYRFTRLLAG 244 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +M VGD DQ IY +R A + NI F D+P A RLE NYRST IL ANA+I Sbjct: 245 EEANLMAVGDPDQGIYSFRAADIRNILDFTQDYPKARVYRLEDNYRSTEAILRFANAVIV 304 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N RL K L GEP+ L+ A + DEARFV I G A+LYR+NA Sbjct: 305 KNALRLEKTLRPVKKGGEPVRLFRAESARDEARFVAEEIARL---GPPFDRVAVLYRTNA 361 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGI Sbjct: 362 QSRLLEQALASRGIPARVVGGVGFFERAEVKDLLAYARLSLNPLDAVSLKRVLNTPPRGI 421 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T++ V+ +R+R L L++A + AL L+ F+ L++ L P Sbjct: 422 GPATVEKVQAIARERGLPLFEALK----VAALTLPRPEPLRAFLALMEELMDLA-FGPAE 476 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 ++ + ++ E + R+EN+EEL+ A ++ L FL Sbjct: 477 AFFRHLLLATDYPAYLKEAYPEDAEDRLENVEELLRAAKEAES---------LMDFLDKV 527 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + SL LEEERRL Sbjct: 528 ALTARAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRSSLSTQEGLEEERRL 587 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YVGVTRA ++L L+YA+ R +YG+ RPSRF+ E+ E E R S + Sbjct: 588 FYVGVTRAQERLYLSYAQEREIYGRLEPVRPSRFLEEVDEGLYEVYDP----YRQSSRKP 643 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 P ++ G++V H +FG GT+V G + V F+G G+K L YA L Sbjct: 644 TPPPHRALPGAFRGGEKVVHPRFGPGTVVAAAGD----EVTVHFEGVGLKRLSLKYADLR 699 Query: 719 S 719 Sbjct: 700 P 700 >UniRef50_A8HYL6 DNA helicase II n=8 Tax=Rhizobiales RepID=A8HYL6_AZOC5 Length = 835 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 289/644 (44%), Positives = 394/644 (61%), Gaps = 15/644 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LD LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I+AVTFT Sbjct: 66 PSYLDGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQILAVTFT 125 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ RI ++G + GM W+GTFH + R+LR HH L F ILD++DQLRL Sbjct: 126 NKAAREMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELVGLKSGFTILDTDDQLRL 185 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEA 180 LK+LI A +DEK+WP R I+ K+ GL P + Q +Y AYQ Sbjct: 186 LKQLIAAEEIDEKRWPARMLASAIDGWKNRGLTPEQVPAGEGAAFANGRGQMLYAAYQAR 245 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +LLL L+ P +L Y +F ILVDE+QDTN QY W+RLLA + Sbjct: 246 LKALNAVDFGDLLLEGIRLFRENPDVLAEYHRKFKYILVDEYQDTNVAQYLWLRLLAQGS 305 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V VGDDDQSIYGWRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI N Sbjct: 306 RNVCCVGDDDQSIYGWRGAEVDNILRFESDFPGAKVIRLERNYRSTGHILAAASHLIAFN 365 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 GRLGK L+++G GE +++ A++ +EAR + + I+ Q G AL++ AIL R++ Q Sbjct: 366 EGRLGKTLFSEGEKGEKVTVTGAWDSGEEARAIGDEIEALQRAGHALSQIAILVRASFQM 425 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+ + + YR+ GG RF+ER EI+DAL+YLR + + DD AFER+VN P RG+GD Sbjct: 426 REFEDRFVTLGLNYRVIGGPRFYERAEIRDALAYLRCVISPADDLAFERIVNVPKRGVGD 485 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + +R +R + L +A R L + + L + S L+ F++ + ++ +M Sbjct: 486 AAIKQIRDVARAAGVPLMEATRLLTESEELKPKLRSTLRGFVQSFERWREQAENMKHTEL 545 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG M+++++ + R+ENL+ELV + F L FL H +L Sbjct: 546 AEVVLDESGYTEMWQKDRSAEAAGRLENLKELVRSMEGFE---------NLSGFLEHISL 596 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRL 598 DAVQ+MTLHSAKGLEF VF+ G EEG+FP Q +LDE G+ LEEERRL Sbjct: 597 VMDVDSG-AGDDAVQIMTLHSAKGLEFDTVFLPGWEEGLFPHQRALDEQGKAGLEEERRL 655 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 AYVG+TRA + +A RR++G PSRF+ ELP+ V+ Sbjct: 656 AYVGITRARASARVYFASNRRIHGMWNSTVPSRFLDELPDTHVD 699 Score = 49.3 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Query: 667 DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 S + G+RV H KFG G I ++G+ +L V F+ G K ++ ++ +E V Sbjct: 788 PSAFSAGERVFHIKFGYGEITAIDGN----KLTVLFEKAGEKRVLESF--VEKV 835 >UniRef50_C2KR35 ATP-dependent DNA helicase n=3 Tax=Mobiluncus RepID=C2KR35_9ACTO Length = 900 Score = 837 bits (2164), Expect = 0.0, Method: Composition-based stats. Identities = 271/703 (38%), Positives = 371/703 (52%), Gaps = 58/703 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ + LN Q +AV P LLV+AGAGSGKTRVL RIAWL++ P+ I+A+TF Sbjct: 51 ITAITKGLNPAQYQAVTHPGGALLVMAGAGSGKTRVLTRRIAWLLATGRVRPWEILAITF 110 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ L+G + MWV TFH R+LRA + + F I D+ D L Sbjct: 111 TNKAAGEMRERVETLVGNAAKYMWVSTFHSSCVRILRAEAETLGITRSFSIYDTADTKAL 170 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE--QTWQKVYQAYQEA 180 L R+IK LD K++ P+ I++ K+E + P P + Q ++Y YQ+ Sbjct: 171 LTRIIKGRGLDPKRFTPKSFAARISNAKNELVEPATFAEMAAPDKISQLTAEIYAEYQQL 230 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG-- 238 RA DF +L+ LW P IL YR++F +LVDE+QDTN QY +RLLA Sbjct: 231 LRRANAFDFDDLIAEVVYLWRRHPEILAKYRDKFRYVLVDEYQDTNPAQYQLVRLLARDP 290 Query: 239 -------------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 + +VGD DQSIY +RGA + NI+ F DFPGA T+ LEQNYRS Sbjct: 291 LGDPRLDGALGAHPGAGLTVVGDSDQSIYAFRGATIRNIEEFEQDFPGATTVYLEQNYRS 350 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T ILS ANA+I N+GR K LWT+ DG ++ A E DEA F++ I+ G Sbjct: 351 TGTILSVANAIISENSGRHKKNLWTEAGDGPKAIMFAADTERDEAAFIIREIRDAHTAGT 410 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+ YR+N+QSR LEE L + ++PYR+ GG +F++R+EIKDA++YL AN DD Sbjct: 411 PWDEFAVFYRTNSQSRALEEMLTRENVPYRVVGGTKFYDRKEIKDAIAYLTAAANPADDG 470 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELL----QEKALAGRAASALQRF 461 R++N P RG+GD +R+ +R + QA R + E L+ +A +AL Sbjct: 471 NLLRILNEPKRGLGDVAQTKIREAARLSGTSFGQAMRGFITGGVHEGQLSAKATTALASL 530 Query: 462 MELIDALAQETA-DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 + L+D L PL ++DSG + RIENL EL +FS Sbjct: 531 VNLLDNLRGLDEAGAPLDEILGTALEDSGYLPKLRASNNPQDDARIENLLELHAVAEEFS 590 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA--------------------------- 553 +E D L FL +L A Q Sbjct: 591 LSEPDS---RLADFLERISLVADTDQLPDQGSKEVAAKEMAPREPETNVSEASGDHPNPA 647 Query: 554 ------VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 V LMT+H+AKGLEF VF+ GME+G+FP SLD+ +EEERRLAYV VTRA Sbjct: 648 PETKPEVTLMTVHTAKGLEFNTVFVTGMEDGLFPHSRSLDDPEAIEEERRLAYVAVTRAR 707 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 ++L LT A R ++G + SRF+ ++P + V+ R + Sbjct: 708 RQLYLTRAAARTVFGDTMNMPASRFLNDIPAQYVDNRRELTDM 750 Score = 60.1 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%) Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +GQ+V H +G+G ++ +EG G + +V F+ K L+ +A L Sbjct: 851 HVGQQVHHDIYGDGKVLGLEGEGTGAIARVKFKTGATKRLLLKFAPLTP 899 >UniRef50_C8WP33 UvrD/REP helicase n=3 Tax=Coriobacteriaceae RepID=C8WP33_EGGLE Length = 813 Score = 837 bits (2163), Expect = 0.0, Method: Composition-based stats. Identities = 289/820 (35%), Positives = 416/820 (50%), Gaps = 108/820 (13%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + +DSLN QREAV LLVLAGAGSGKTRVL +RIA L+ + +P+ I+A+ Sbjct: 1 MSID--IDSLNGPQREAVVTVDGPLLVLAGAGSGKTRVLTYRIANLIENHDVAPWEILAI 58 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+ L+G GMWV TFH + R+LR+ ++F I D++DQ Sbjct: 59 TFTNKAAAEMRERLNGLVGPRCRGMWVSTFHSMCVRMLRSDAEKLGFTRNFTIYDTDDQK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 RL K ++ +++D K++P M I++ K+E + P + +PV + +VY QE Sbjct: 119 RLYKEIMAELDIDPKRFPVNALMNRISTAKNELVVPSAFEKEAGDPVGKVASRVYSRLQE 178 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A DF +LLL A+ L N + Y++RF I+VDE+QDTN+ QY+ LLA Sbjct: 179 RLKAANAFDFDDLLLYAYLLLKNHEDVRSAYQQRFRYIMVDEYQDTNHAQYSITGLLAEG 238 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +M+VGDDDQSIY WRGA + NI F D+P A T++LEQNYRS N+L+AANA+I N Sbjct: 239 HKNIMVVGDDDQSIYSWRGADLRNILEFEQDYPTAHTVKLEQNYRSVGNVLAAANAVIAN 298 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R KKL+T DG+ I +Y A +E DE R++ I+ + G + + A+ YR+NAQ Sbjct: 299 NQHRKAKKLFTSAEDGDKIQVYMAADERDEGRWIAGEIEKQRAAGLSYNQVAVFYRTNAQ 358 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+LE+ LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG Sbjct: 359 SRMLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDIAAKRVINVPRRGIG 418 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T++ + Q +R+ +T + + + L A A+ F+ L++ D L Sbjct: 419 KTTIERIEQFAREMGMTFMEGAELAIVDPELRASARQAIGEFVGLVNEARTYGGD--LRK 476 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL----------- 528 + +I SGL + E ++ + RIEN++E + +F+ EDED Sbjct: 477 VIETIIDKSGLIGALQAENTDEARGRIENIQEFLGVVDEFTETHEDEDALYEAPTAEPAD 536 Query: 529 -----------------------------------------MPLQAFLSHAALEAGEGQA 547 L F+ L Sbjct: 537 APALAPVPSSADALAGSFYAFAGANELAAPAEESPVRVLRGDSLADFIEWVRLRTDLDTV 596 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 AV +MT+HS+KGLEF VF+ GMEE +FP S+ + +EEERRLAYV +TRA Sbjct: 597 AEDGHAVTMMTVHSSKGLEFDCVFVAGMEETLFPHMNSVGDAAGIEEERRLAYVAITRAR 656 Query: 608 QKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP----- 662 +KL LT A R+++G+ + SRFI E+P E + L + ++ G+ Sbjct: 657 KKLFLTCAYARQIFGQTSSNPISRFIQEIPSELRQTTGLGSAGFSGTGWEKRGSRKGIAG 716 Query: 663 -----------------------------------------MVENDSGYKLGQRVRHAKF 681 + G V H F Sbjct: 717 SGTEAGGGRVFGRSSASGSSGRSDERAARVGGSYVRPGAEKKAAAKMTFSTGDTVDHKTF 776 Query: 682 GEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVAAYARLESV 720 G G + ++G L V F G K L+ YA + + Sbjct: 777 GRGKVTKVDGD----TLFVKFSKTGQTKKLLKDYAPIVKI 812 >UniRef50_A1BEA2 ATP-dependent DNA helicase PcrA n=2 Tax=Chlorobium RepID=A1BEA2_CHLPD Length = 734 Score = 836 bits (2161), Expect = 0.0, Method: Composition-based stats. Identities = 260/739 (35%), Positives = 405/739 (54%), Gaps = 26/739 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ L LND QR+AV A ++VLAGAGSGKTRV+ +RIAWL+ S +I+A+TF Sbjct: 1 MTDFLLDLNDVQRQAVRATEGPVMVLAGAGSGKTRVITYRIAWLIKNGYASAKNILALTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EMRHR+ L+ GG+W+GTFH + RLLR ++F I D++D Sbjct: 61 TNKAAGEMRHRVDVLLQQGSAGGLWIGTFHSIFARLLRNDIHLLGYDRNFSIFDADDSKS 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEA 180 L+++ + +N+ P I+ K+ + P + G+ +Q KVY Y Sbjct: 121 LIRQSMGELNISPDSVPLNTLQGIISRAKNSFILPEEFRRSAGDYNQQIAAKVYDLYTRK 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DF +LL++ EL+ P +L+ ++ F +L+DE+QDTN QY ++L+ Sbjct: 181 LRENNALDFDDLLIKPLELFREHPMVLEALQDTFRYLLIDEYQDTNKAQYLAAKMLSAKH 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIY WRGA + NI F +D+ A T +L +NYRST IL AAN++I NN Sbjct: 241 RNIFVVGDDAQSIYSWRGADISNILNFQDDYTDALTFKLVENYRSTGTILQAANSVIRNN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQ 359 ++ K+L + + G+P++L A NE EA + I + + + G A+ YR+NAQ Sbjct: 301 LRQIKKELVSHRSAGDPLTLIEARNERHEAEKIGEYIHSIRIEKGYEFRSFAVFYRTNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SRVLE+ + Q +PY+I+G + F++R+EIKDA++YLR + N D + R++N P R IG Sbjct: 361 SRVLEDLMRQNRIPYKIFGSVSFYKRKEIKDAVAYLRFLLNDRDSESLLRIINFPPRKIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + ++ +R+ + +TL++A E R ++L+ F LI+AL ++ Sbjct: 421 ETSIGKLREFAEAEGITLYEAITRA-DEGQFQSRLVNSLKGFSSLIEALRLLAETGTVYA 479 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + + + + ++E + R ENL+EL++ R FS N D+ L FL + Sbjct: 480 VLTELFSLTSIPLLLKEENTAESLARHENLQELLSMARDFSDNNPDQG--SLGDFLETIS 537 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + ++ + V LMT+H++KGLEFP VFI G+EE +FP + E +LEEERRL Sbjct: 538 LASNYDESQDSDNYVSLMTVHASKGLEFPVVFITGLEERLFPL--NCYEPEQLEEERRLF 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA +K+ L++A+TR LYG+ Y S FI E+ V+ R Sbjct: 596 YVAMTRAQEKIFLSWAQTRYLYGQPQYCLKSMFISEIDSSIVKTESGTVLADRKERQGTR 655 Query: 660 GTPM------------------VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 +SG + G V HA FG+GT+++++G G + + Sbjct: 656 NAVPESGGYRQRPAGAVSAPSQKPRESGLREGSTVHHAVFGQGTVLDVQGRGAGQKALIR 715 Query: 702 FQGQGIKWLVAAYARLESV 720 F+ G K L+ YA L + Sbjct: 716 FRNAGEKTLMVQYANLRVL 734 >UniRef50_A0M3U3 PcrA-like UvrD/Rep family ATP-dependent DNA helicase n=28 Tax=Bacteroidetes RepID=A0M3U3_GRAFK Length = 787 Score = 835 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 271/774 (35%), Positives = 420/774 (54%), Gaps = 56/774 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 ++ L LND QR V ++V+AGAGSGKTRVL +RIA+LM + ++I+++T Sbjct: 14 NLEAYLAELNDAQRAPVLQKDGPMIVIAGAGSGKTRVLTYRIAYLM-NQGVDAFNILSLT 72 Query: 62 FTNKAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAA EM+ RI +++G+ +W+GTFH + ++LR P +F I D++D Sbjct: 73 FTNKAAREMKQRISKIVGSSEAKNLWMGTFHSVFAKILRFEADKMGYPSNFTIYDTQDSH 132 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLR-------PHHIQSYGNPVEQTWQKV 173 +++ +IK M LD+ + +Q I+S K+ + P ++ + ++ Sbjct: 133 SVIRAIIKEMRLDKDVYKYKQVYNRISSYKNSLITVKAYFQNPELQEADAMSKKPRLGEI 192 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+AY + C +AG +DF +LLL+ +EL P +L Y+ RF ILVDE+QDTN+ QY + Sbjct: 193 YKAYVDRCFKAGAMDFDDLLLKTNELLNRFPEVLHKYQSRFKYILVDEYQDTNHSQYLIV 252 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 R L+ + +VGDD QSIY +RGA + NI F D+ + RLEQNYRS+ NI+ AA Sbjct: 253 RALSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDNVQMYRLEQNYRSSKNIVEAA 312 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAI 352 N++I+ N +L K +WT DG I + + +E R+V + I + N + AI Sbjct: 313 NSIIDKNQTKLDKIVWTANEDGPKIIVNRLLTDGEEGRYVASSIFENKMQNQMDNGDFAI 372 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NAQSR +E+AL + +PYRIYGG+ F++R+EIKD L+YLRLI N D+ A +RV+N Sbjct: 373 LYRTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLAYLRLILNPKDEEALKRVIN 432 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-EKALAGRAASALQRFMELIDALAQE 471 P+RGIG T+D + + ++++++ + + + E + + L F+ +I + A Sbjct: 433 YPSRGIGQTTMDRLAIAANQHKISMFEVIKNIDKLELKINRGTQTKLVNFVNMIRSFAIM 492 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED--EDLM 529 + V K +GL +++ +G RIEN+EEL+ R F +++ + Sbjct: 493 NETSDAFQIAETVTKKTGLVQELKKDGTPEGIARIENIEELLNGMRDFVEGQKELADATG 552 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L FL AL D V LMT+H AKGLEFP V+IVGMEE +FPS MS++ Sbjct: 553 SLSEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSGMSMNTR 612 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------- 642 LEEERRL YV +TRA ++ LTY +R +GK V PSRFI E+ ++ ++ Sbjct: 613 SELEEERRLFYVAITRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQYLDLMVPQDD 672 Query: 643 ---------------------EVRLRATVSRPVSHQRMGTP---------------MVEN 666 + + P +H+ N Sbjct: 673 YKYKPLIDTDIFGDAVDKSKLRQTKPKSGTPPPAHKPSEEQLRKLRKLKPAATEPSKARN 732 Query: 667 DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 G V H +FG GT++ +EG G+ + ++ F GIK L+ +A+L+ + Sbjct: 733 TLDLAEGNEVEHMRFGRGTVMKLEGVGQDRKAEIEFDQGGIKKLLLRFAKLKVL 786 >UniRef50_A1AVZ1 UvrD/REP helicase n=3 Tax=Gammaproteobacteria RepID=A1AVZ1_RUTMC Length = 718 Score = 834 bits (2156), Expect = 0.0, Method: Composition-based stats. Identities = 339/724 (46%), Positives = 485/724 (66%), Gaps = 10/724 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAP-RSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M++S + + LNDKQ ++V N L+LAGAGSGKTRVL HRIA+L++ ++ +I+A Sbjct: 1 MNLSEITNDLNDKQCQSVTFNNEKNALILAGAGSGKTRVLTHRIAYLITQKDIRIDAILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 VTFTNKAA EMR R+ L+ MW+GTFH LAHRLLR H+ + L FQILD++DQ Sbjct: 61 VTFTNKAATEMRERLSTLLRRPIQSMWMGTFHSLAHRLLRTHYEKSKLTSGFQILDAQDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 R++KRL+K ++DE ++P ++ W+IN+QK+E +R I N + +V++ Y+ Sbjct: 121 FRIVKRLMKENSIDESKFPIKKVQWFINNQKNEDIRAQDIDPDYNYFIKKNLEVFELYEA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 C L+DFAELL+R++EL N +L HY+ RF +ILVDEFQDTN +QY WI+LL Sbjct: 181 YCQENDLIDFAELLIRSYELLKNNTDLLNHYQARFEHILVDEFQDTNTVQYKWIKLLFNG 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 K+ VGDDDQSIYGWRGA++ENI + DF ETIRL+QNYRST NIL+A+NALI + Sbjct: 241 HNKIFCVGDDDQSIYGWRGAKIENITKLCTDFTPIETIRLKQNYRSTGNILNASNALITH 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R+GK LWTD +GE I +Y A E DEA +V++ I+ NG + ++C+ILYR NAQ Sbjct: 301 NVNRMGKSLWTDAGNGELIDVYEARTETDEANYVISNIQKLITNGASPSDCSILYRFNAQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+ EEAL++ ++PY IYGG++FFE EIKDALSYLRLI N D+ AFERVVN PTRGIG Sbjct: 361 SRIFEEALIKYNIPYIIYGGLKFFEYTEIKDALSYLRLIENSADNVAFERVVNFPTRGIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + T+ +R ++D +L+QA ++ L RAA+AL F+ LI + +T + L Sbjct: 421 NVTVKKIRTFAQDNHTSLFQAAIQISSI--LPTRAANALSSFINLIKQITDDTKHLNLSE 478 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + ++ SGL Y +K ++ ENL++L+T T+Q+++ E+D + + F+S + Sbjct: 479 KVTNLLNTSGLIMHY---SNDKIGSKKENLKKLITITKQYNH-EQDNKMSEVMGFISLTS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L++ + VQLMT+HSAKGLEFP VF+VGMEE +FPS+ S +E +EERRL Sbjct: 535 LDSSGNTNASINQNVQLMTIHSAKGLEFPCVFLVGMEEDLFPSRQSKNEPHLTDEERRLC 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV---SH 656 YVG+TRAM+KL+L+YA R LYG+ +Y PSRF+ E+P + + +++ + + + Sbjct: 595 YVGMTRAMKKLSLSYAIKRFLYGQSLYAYPSRFLNEIPSKYLNKIKAKFGATIQNYNDDN 654 Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 ++D +G V+HAKFG GT++N EG G+ +R+Q+ F+ G KWL+ +YA Sbjct: 655 TFNKNITPKSDDQISIGALVKHAKFGLGTVLNFEGQGDSTRVQIKFKQVGTKWLINSYAN 714 Query: 717 LESV 720 LE + Sbjct: 715 LEFI 718 >UniRef50_B3QYS3 UvrD/REP helicase n=9 Tax=Chlorobiaceae RepID=B3QYS3_CHLT3 Length = 765 Score = 833 bits (2154), Expect = 0.0, Method: Composition-based stats. Identities = 266/755 (35%), Positives = 414/755 (54%), Gaps = 42/755 (5%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL SLN +Q++AV + ++++AGAGSGKTRV+ RIA++++ ENC+P I+A+TF Sbjct: 15 LETLLKSLNTEQKKAVETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTF 74 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EMR R+ +++G S G+W+GTFH RLLR H D+ I D++D Sbjct: 75 TNKAANEMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQHADRLGFTSDYTIYDADDSKN 134 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEA 180 L+K++I + + P I+ K+ + P + Q+ + + + +V+ Y E Sbjct: 135 LIKQIITELGIATDVLAPNAVQGKISMAKNRLVTPEQMSQNASDFISEKTAEVFYKYNER 194 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + +DF +LL++ +L+ P IL HY+ERF I++DE+QDTN QY ++LAG Sbjct: 195 LQKNNALDFDDLLIKPIKLFNEHPEILAHYQERFQYIMIDEYQDTNRAQYIVAKMLAGQH 254 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDD QSIY WRGA + NI F ND+ A RLE+NYR T IL AN +I NN Sbjct: 255 RNICVVGDDAQSIYSWRGADIANILGFQNDYKEATICRLEENYRCTKTILKVANTVISNN 314 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQ 359 +L K L+T GEP++L+ A +E EA V I+ + +G ++ AI YR+NAQ Sbjct: 315 KEQLEKTLYTSNETGEPVTLFEATDERREAEKVAMAIRERKLSSGNQNSDFAIFYRTNAQ 374 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR LE+AL + YR++GG+ F++R+EIKD ++YLR I N D+ + R++N P RG+G Sbjct: 375 SRALEDALRFNGIAYRVFGGVSFYKRKEIKDIVAYLRFILNSRDEESLLRIINFPARGVG 434 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + +L ++ + + +L++A L R SAL F LI+ L + + Sbjct: 435 ETSLKRLKDIAIEEGFSLYEAICRATHY-DLQNRLISALNDFRMLIEDLREIAQQHTAYE 493 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +++ + L + + E + R +NL+E + RQF ++ L AFL A+ Sbjct: 494 VVAELLRKTRLLEILKNENTAEANARYDNLQEFLNFARQFCDKSAEDP--SLNAFLQSAS 551 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + AD + V LMT+H+AKGLEFP VF+ G+EE +FP E Sbjct: 552 LATDQDNADANGNQVTLMTIHAAKGLEFPVVFVTGLEERLFPLNPDEPRELEEERRL--F 609 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP--------EECVEEVRLR---- 647 YV +TRA +KL +++A++R +G+ + SRFI EL + ++E+RL+ Sbjct: 610 YVALTRAEKKLYVSFAKSRYKFGQSFPAKRSRFIEELDGGSVVTEGGKLLDEIRLQDAEK 669 Query: 648 ----------------------ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 V+ S Q T S +G +V+H FG G Sbjct: 670 SRYHYDDSEYTSRSNFSDRAQSRRVAPAASRQTSLTSSSAKKSAIAVGMKVQHKIFGTGK 729 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 ++ ++GSG+ ++++V F+G G K LV YA L V Sbjct: 730 VMAVQGSGDDTKIKVFFRGAGEKTLVLKYANLTVV 764 >UniRef50_C2CV85 Possible ATP-dependent DNA helicase n=2 Tax=Bifidobacteriaceae RepID=C2CV85_GARVA Length = 964 Score = 833 bits (2153), Expect = 0.0, Method: Composition-based stats. Identities = 263/704 (37%), Positives = 378/704 (53%), Gaps = 56/704 (7%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 + LL+ LN +Q +AV LL+ AGAGSGKTRVL RIAW+++ P I+A+T Sbjct: 96 NPQSLLEGLNPQQSKAVQYTGPALLIGAGAGSGKTRVLTRRIAWILANRKAWPSQILAIT 155 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAAAEMR R+ L+G S MWV TFH ++LRAH L F I DS D R Sbjct: 156 FTNKAAAEMRERLASLIGNSANSMWVSTFHSACVKILRAHGDSIGLKSGFSIYDSSDCER 215 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV--------------- 166 L+K + +N+D K++ P+ + I+ K+ + P Sbjct: 216 LVKIIASELNIDIKKFTPKLLLSKISDFKNNLVTWQENLKNYAPDYKPGASVSGASSFNA 275 Query: 167 ----EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEF 222 + + VY YQ + VDF +L++ +L P + +Y+ +F ILVDE+ Sbjct: 276 AGNADALYAAVYAEYQNRLSVSNAVDFDDLIMLTVKLLRQNPQVSAYYKRKFRYILVDEY 335 Query: 223 QDTNNIQYAWIRLLAG-------------------------DTGKVMIVGDDDQSIYGWR 257 QDTN+ QY IR LAG + +VGD DQSIY +R Sbjct: 336 QDTNHAQYVLIRELAGVDDAGVDDYSTDSTVSSVSPDSTQLPQSSITVVGDSDQSIYAFR 395 Query: 258 GAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEP 317 GA + NIQ F DFP A TI LEQNYRST IL AANA+I NN R KKLWT G P Sbjct: 396 GADIRNIQDFEQDFPSATTIMLEQNYRSTQTILDAANAVISNNANRKPKKLWTSLGKGSP 455 Query: 318 ISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 I Y A N EA +V I ++G ++ AI+YR+N+QSR LE+AL+++ +PY++ Sbjct: 456 IVGYVADNAQGEASWVAQEIARLAGEDGVNYSDIAIMYRANSQSRSLEDALIKSGLPYQL 515 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 GG +F+ER+E+KDAL+YL+ IAN +DD R++N P RG+G R + +++ ++ Sbjct: 516 VGGTKFYERREVKDALAYLQSIANPDDDVNMRRILNVPKRGLGARAESQITSYAKENSIS 575 Query: 437 LWQAC---RELLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQTDRVIKDSGLR 491 W A ++ ++ ++ R +AL+ F +L+ +L + D + V+ +SGL Sbjct: 576 FWSALSQIDKIAEQIGISSRTFNALKSFRDLMTSLIDFMKANDSKPSKVVENVLNESGLL 635 Query: 492 TMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ 551 + K + + R++NL +L + ++ N D + FL AL A Q Sbjct: 636 QDLRESKDPQDEFRVDNLSQLQSVAAEYEQNTPD---ANVAGFLETTALVADSDQLPDQG 692 Query: 552 D---AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQ 608 + V LMTLH+AKGLE+P VF+ GME+G FP +D L EERRLAYVG+TRA + Sbjct: 693 EDTGKVTLMTLHTAKGLEYPVVFLTGMEQGTFPHSRCVDNQKELCEERRLAYVGITRAKK 752 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 L +T+A R +GK S+F+ E+P + + R A V R Sbjct: 753 ILYVTWAAERSQWGKSAEMIQSQFLDEIPADLISWKRKEADVMR 796 Score = 66.3 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 29/62 (46%) Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 N + + G ++ H +G GT++ + G +S + V F G+K L+ A +E Sbjct: 903 QEKDNHLNINDFHEGDKISHDTYGLGTVLKTQDKGRNSIITVDFGSDGVKRLMLRVAPIE 962 Query: 719 SV 720 + Sbjct: 963 KL 964 >UniRef50_C6A858 Superfamily I DNA and RNA helicase n=18 Tax=Bifidobacterium RepID=C6A858_BIFLB Length = 939 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 266/693 (38%), Positives = 379/693 (54%), Gaps = 42/693 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 L+ LN++Q +AV LL+ AGAGSGKTRVL RIAW+++ P ++A+TF Sbjct: 44 PQELIGDLNEQQAQAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFGAWPSQVLAITF 103 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAAAEMR R+G L+G MWV TFH R+LR L F I D+ D RL Sbjct: 104 TNKAAAEMRERLGALIGGVADRMWVSTFHSACVRILRRDGEQIGLKSGFTIYDTADCERL 163 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV---------------- 166 +K + N+D K++ PR + I+ K++ + P Sbjct: 164 IKLVCADFNIDIKRFTPRSILARISDYKNQLTDASTALAQYAPDFKPGMRHYSFGQIGDP 223 Query: 167 EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN 226 E + VY YQ A VDF +L++R EL +PH+ ++YR +F ILVDE+QDTN Sbjct: 224 EPVYAVVYAEYQYRLALANAVDFDDLIVRTVELLRTQPHVAEYYRHKFRYILVDEYQDTN 283 Query: 227 NIQYAWIRLLAGDTGK-----------------VMIVGDDDQSIYGWRGAQVENIQRFLN 269 + QY +R LAG V +VGD DQSIY +RGA + NIQ F Sbjct: 284 HAQYVLVRELAGVDAHEPSDPMATEAGKSGPAWVTVVGDSDQSIYAFRGADIRNIQDFEK 343 Query: 270 DFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDE 329 DFP A TI LEQNYRST IL AANA+I +N+ R KKLWT +G+ I Y A E Sbjct: 344 DFPDARTIMLEQNYRSTQTILDAANAVIAHNSARKPKKLWTALGEGDKIIGYAADTAQLE 403 Query: 330 ARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEI 388 A ++ +I + G ++ AI+YR+NAQSR LEE L+QA +PY++ GG +F+ER+E+ Sbjct: 404 AHWIAQQILHLHEEKGLPYSDMAIMYRANAQSRSLEEGLIQAHIPYQLIGGTKFYERREV 463 Query: 389 KDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK 448 KDA++YL+ I N DD R++N P RG+G R + + + T W A +L + Sbjct: 464 KDAIAYLQAIVNPADDINMRRILNVPKRGLGTRAESQLTLFANEHNQTFWWAIEQLEDIE 523 Query: 449 ALAGRAASALQRFMELIDALAQETA--DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 ++ R A+A++ F EL+ +L D +V++ S + + + + + ++R+ Sbjct: 524 GMSARTANAVRAFRELMTSLRTFAGEHDSKPSEIVAQVLEQSHMLELLRKSEDPQDESRV 583 Query: 507 ENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADT---WQDAVQLMTLHSAK 563 ENL +L + +F N D L FL AL A Q V LMTLH+AK Sbjct: 584 ENLSQLQSVAAEFEQNTPDTT---LAGFLETTALVADSDQLPGEGHDSGKVTLMTLHTAK 640 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+P VF+ GME+G FP +++ L EERRLAYVG+TRA ++L LT A R +G+ Sbjct: 641 GLEYPIVFLTGMEQGTFPHSRAMENMDELSEERRLAYVGITRAKRRLYLTRAAVRAQWGR 700 Query: 624 EVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 + PS+F+ E+P+ ++ R A + R S Sbjct: 701 QSEMMPSQFLDEIPDSLIDWKRREAGMERMRSG 733 Score = 68.6 bits (167), Expect = 9e-10, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 33/64 (51%) Query: 657 QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 ++ N + + +G R+ H +FG G +V + G++S + V F G+K L+ A Sbjct: 876 SQIAADNDLNIADFHVGDRITHDRFGLGKVVQTQDKGKNSVITVDFGSTGVKRLMLRLAP 935 Query: 717 LESV 720 +E + Sbjct: 936 IEKL 939 >UniRef50_B0TWY9 DNA helicase II n=19 Tax=Francisella RepID=B0TWY9_FRAP2 Length = 742 Score = 832 bits (2151), Expect = 0.0, Method: Composition-based stats. Identities = 324/745 (43%), Positives = 473/745 (63%), Gaps = 28/745 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L LN +Q++A N L+LAGAGSGKT+VL RIA+L + S +I+AV Sbjct: 1 MSNKDFLSGLNPQQKKATLLEDRNSLILAGAGSGKTKVLTSRIAYLCRDKGVSVENILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++HR+ +++G S GMW+GTFHG+AHRLLR H + L ++F+ILD ++Q Sbjct: 61 TFTNKAAKEIQHRVEKMLGISTFGMWIGTFHGIAHRLLRKHAHELGLDKNFRILDQDEQA 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +L+K++IK+++LD+K++PP+ +IN QKD+ +R + + + + +Y AY+E Sbjct: 121 QLIKKVIKSLDLDDKKYPPKLLQNFINKQKDKAVRSNKLTKQ---YDINYTHIYTAYEER 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 +DFA+LLL +EL+ + ++Y+ F IL+DEFQDTN +QY W++LL D Sbjct: 178 LLLDNALDFADLLLYLYELFSLNQQLREYYQSLFRYILIDEFQDTNQVQYMWLKLLVTDN 237 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 +M VGDDDQSIYGWRGA V+NI +++ D E I+LEQNYRST NIL AN++I+NN Sbjct: 238 NYMMAVGDDDQSIYGWRGAVVDNIHKYVADLNDVEIIKLEQNYRSTKNILKVANSVIKNN 297 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + R+ K+LW+ DGE + +YCA NE DEA++++++I+ D G ++ AILYRSN S Sbjct: 298 DNRMSKELWSAAEDGEKVEVYCAVNERDEAKYIIDKIRQLHDGGVDYSDIAILYRSNYLS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEE+ + S+PYRIYGG RFF+R E+KDAL+YLRL ND+ AFER++NTPTRGIG+ Sbjct: 358 RVLEESCIYTSIPYRIYGGFRFFDRAEVKDALAYLRLAVTSNDNLAFERIINTPTRGIGN 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +TLD +R S+ ++ WQA +++Q++ + R AS L +F+E+I+A++ + D+ L Sbjct: 418 KTLDTIRNFSQINNVSYWQATIDIIQKEIVTKRTASLLLKFIEIINAISSQIKDLSLDKL 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE--DEDLMPLQAFLSHA 538 + VI +SGL Y+++ EK + +I+NL+EL++A + F E D++ LQ FLS A Sbjct: 478 LETVINESGLLASYQEKDTEKDRQKIDNLKELISAAKDFEPQIELLDDNTDILQDFLSFA 537 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP------------SQMSL 586 LEAGE QAD D+VQLMT+H++KGLEF VF+V EEG+FP S S Sbjct: 538 VLEAGEMQADENTDSVQLMTIHASKGLEFRYVFLVAAEEGVFPPSSIINAEEAYTSSESK 597 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 +L EERRL YV VTRAM+ LT++YA+ R ++G+ + SRF+ E+ E + E +L Sbjct: 598 KIQEKLAEERRLFYVAVTRAMKALTISYAQVRNIFGRSSFQVKSRFLMEIDSEHINEGKL 657 Query: 647 RATVSRPVSHQRMGTPMVEND----------SGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 ++ V + +K G +V H FG+G V + G Sbjct: 658 TVGSQNKPKLKQKSNFGVSPFDFLKSNDTKGNKFKKGDKVFHKVFGKGIFVKAQSQGSKE 717 Query: 697 RLQVAFQ-GQGIKWLVAAYARLESV 720 V F G K L+A A L V Sbjct: 718 FYTVDFGVDVGQKILLADIANLVKV 742 >UniRef50_UPI00016C5306 ATP-dependent DNA helicase n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5306 Length = 755 Score = 831 bits (2147), Expect = 0.0, Method: Composition-based stats. Identities = 263/753 (34%), Positives = 402/753 (53%), Gaps = 41/753 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D + LL L QR AV LL+LAGAGSGKTRV+ R+A+L+ ++I+A+T Sbjct: 3 DDADLLADLTPDQRAAVMHGEGPLLILAGAGSGKTRVITRRVAYLLRA-GVRAHNILAIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA EM++R+ +L + +WV TFH L RLLR + ++F I D++D+ + Sbjct: 62 FTNKAAGEMKNRVEKLAPGN--RVWVSTFHSLGARLLRQYAERLGFDRNFTIYDTDDRNK 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEA 180 L+K ++A +D ++ P + I+ K++ + P + + ++T VY Y++ Sbjct: 120 LVKDALEAAGIDNVKFTPERIAGAISKAKNQLVTPPQYERTATDFFQKTVAAVYPRYEKR 179 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 A +DF +LL + RF I++DE+QDTN+ QY ++ L+ + Sbjct: 180 LRSANAMDFDDLLYLPAMALKQNEELRAELDSRFRYIMIDEYQDTNSAQYQIVKQLSINN 239 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 V +VGD DQSIY WRG+ ++ I F DFP A TI L QNYRST +I+ AA+ LI++N Sbjct: 240 PNVCVVGDPDQSIYKWRGSDIKIILDFERDFPNARTITLAQNYRSTKSIIRAASVLIDHN 299 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-ALAECAILYRSNAQ 359 R K L TD GEP+++ N LDEA VV RIK G + AI R NA Sbjct: 300 KQRKKKDLVTDNPQGEPVNVITFDNGLDEAEGVVVRIKEAVKAGTFKYRDHAIFMRINAL 359 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 +R LE A ++ +P++I G+ FFER+E +D L+YLRL+ N +D +F RVVN P RGIG Sbjct: 360 TRSLESAFVKHGVPFQIVKGLAFFERKENRDVLAYLRLLTNPHDGVSFLRVVNAPARGIG 419 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 +LD ++ + +++ L A ++ + + G+AA+ L+ F L+ L + D P H Sbjct: 420 KVSLDKLQSFAASQEIGLLAAAGQIAKITEIKGKAATGLRDFHRLMTDLRSKM-DQPPHE 478 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 V+ SG M E+ R+ N+ ELVTA +QF ++++ + FL Sbjct: 479 LVRLVLDKSGYEAMLRDSTDEEDADRLANVSELVTAAKQFW---DEDNSRTITDFLEQIT 535 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + D D V +MTLH++KGLEFP V+I+ +E+G+ P + SL +EEERRL Sbjct: 536 LASDTDGWDEQADHVSVMTLHASKGLEFPAVYILAVEQGLLPHERSLANDEEIEEERRLC 595 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV---------------EEV 644 +VG+TRAM++L L +A R G+ Y S+FI ELP + +E Sbjct: 596 FVGMTRAMKELYLCHARMREFRGQLNYCIVSQFIQELPRDVRFIDPSMARNVARTAADEW 655 Query: 645 RLR-----------------ATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIV 687 R++ SR + T D+G +G V+H +FG G + Sbjct: 656 RVKSSAAAKDWADTGLRPLIPPASRKPNPGLKPTIPDAPDTGLAVGVLVQHEEFGIGNVA 715 Query: 688 NMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + G G +++V F G+K V +L+ + Sbjct: 716 EVSGFGALRKVRVRFAAHGVKLFVGDKIKLKVI 748 >UniRef50_Q0AZZ6 ATP-dependent DNA helicase PcrA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AZZ6_SYNWW Length = 696 Score = 830 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 274/723 (37%), Positives = 399/723 (55%), Gaps = 33/723 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + LN++Q+EAVA +VLAGAGSGKTRVL RI L+ + P+ IMA+TF Sbjct: 1 MQNIFADLNEQQKEAVAHVDGPCMVLAGAGSGKTRVLTRRIVHLVK-QGIPPHRIMAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ ++ W+ TFH +R+LR + + F I+D + L Sbjct: 60 TNKAAQEMRSRVISMLPDFNSQ-WIQTFHSTCNRILRMDIQELGFDKYFSIIDDTEAKSL 118 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQE 179 +K L++ N + + + ++ K+ +P + + +++ +V+ Y Sbjct: 119 IKTLLREEN--DYETKAEELLYIFKQAKNSLEKPEKYFYSFAVPDFIKERNCRVFSLYNS 176 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 ++DF +L++ L+ P +L+ Y+ F I+VDE+QDTN QY W RLLA Sbjct: 177 RLKNLNVLDFEDLIVLCIRLFQQNPDVLEKYQGWFQYIMVDEYQDTNYSQYFWARLLASR 236 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQSIY WRGA+ NI+RFL D+P + I+LE NYRS+ NILSAANA+I N Sbjct: 237 HHNIFVVGDPDQSIYSWRGAEPYNIKRFLGDYPDSRLIKLEMNYRSSGNILSAANAVICN 296 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N R K+L+T GE + +CA + EARF+ + I + + A+ YR++A Sbjct: 297 NEEREEKQLYTQKGQGEKLVHFCAGDSFQEARFIADEINQLLRSENRHFQDFAVFYRTHA 356 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LEEALL ++PY I G +F+ER+EIKD L+YLRL++N ND +FERV+N P RGI Sbjct: 357 QSRALEEALLYRNIPYHIVGARKFYERKEIKDILAYLRLVSNNNDLLSFERVINVPRRGI 416 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPL 477 G++TL ++ S +R ++L E + + +A++ F ++ L T+ L Sbjct: 417 GEKTLGRIKAYSEERGISLLDVLAEAESIPGIGRKMLTAMEDFYGMLKYLTDLVTSGASL 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 ++VI+ +G ++ K + RIENL+EL + +F E E L+ FLS Sbjct: 477 MELLEQVIEVTGYIEELKKSKATDAEARIENLQELRSLVVEF----EREGGQGLEEFLSQ 532 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 AL + D D V LMTLH AKGLEFP VFI G+EEG+FPS S +EEERR Sbjct: 533 TALVQESDELD-NSDHVLLMTLHGAKGLEFPVVFITGLEEGVFPSYRS-QTAEEMEEERR 590 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA ++L L++A +R LYG E + PSRF+ E+PEE + Sbjct: 591 LCYVGITRAQERLYLSHALSRLLYGYERSNPPSRFLYEIPEELL---------------- 634 Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 ++ G RV HAKFG G I + + E V F G + L A L Sbjct: 635 LSPQQKKVAKPVFQAGDRVLHAKFGMGIISEL--NEEEQIAVVEFVQAGTRMLRLDIAPL 692 Query: 718 ESV 720 E + Sbjct: 693 EKI 695 >UniRef50_B2RKD8 ATP-dependent DNA helicase n=5 Tax=Bacteroidetes RepID=B2RKD8_PORG3 Length = 765 Score = 830 bits (2144), Expect = 0.0, Method: Composition-based stats. Identities = 284/764 (37%), Positives = 414/764 (54%), Gaps = 48/764 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L SLND Q+ AV LV+AGAGSGKTRVLV+++ L+ P +MA+ Sbjct: 1 MS-EDYLSSLNDSQKAAVLYNDGPALVIAGAGSGKTRVLVYKLLHLIRS-GYDPARLMAL 58 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ +G + + +GTFH + R+LR + + +DF I D+ D Sbjct: 59 TFTNKAAKEMKERVASEIGPTAYRIQMGTFHSVFSRILRENAIHLGYTRDFSIYDTNDTK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-------QTWQKV 173 LL+ ++K MN+D+K + I+ K++ + P + + ++ Sbjct: 119 SLLRHVMKRMNIDDKVYRLNAVQHRISMAKNQLISPESYAANKDLSRYDIDCRMPRMAEI 178 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y Y C + +DF +LL + + L+ + P +LQ YR+R +L+DE+QDTN QY Sbjct: 179 YSLYTILCKQNNAMDFDDLLFKINVLFRDFPDVLQTYRDRIDYLLIDEYQDTNFAQYLIA 238 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 R L G+ GKV +VGDD QSIY +RGA+VENI F FPG++ +LE+NYRST +I++AA Sbjct: 239 RQLMGEKGKVFVVGDDAQSIYSFRGAKVENILGFSKSFPGSKLFKLEENYRSTQSIVNAA 298 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAI 352 N+LI N GR+ K+++++ GE I L + EA V + I + ++ AI Sbjct: 299 NSLIAYNEGRIPKQVFSNKQVGERIRLTGCLSGYLEAYTVADSIVERRMQEYCPYSDFAI 358 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NAQSRV EEAL + ++P+RIYGG+ F+ R+EIKD L+Y RLI N NDD A RV+N Sbjct: 359 LYRTNAQSRVFEEALRKHNIPFRIYGGLSFYSRKEIKDVLAYFRLIVNPNDDEALRRVIN 418 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQE-KALAGRAASALQRFMELIDALAQE 471 P RGIGD TL + + + +LW E + L+ A L F+ LI L QE Sbjct: 419 YPKRGIGDTTLSRLNEIATASSRSLWDVLSESQKGFPDLSATARRRLGEFVSLIREL-QE 477 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF--SYNEEDEDLM 529 + L+ Q V+K SG+ +K +G +R ENL+EL+ ++ SY EE + Sbjct: 478 SEYESLYEQAADVVKRSGISAEIFSDKSIEGISRQENLKELLNGIEEYGTSYAEERGEKP 537 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L FL+ L + D V LMT+H+AKGLEF +FIVGMEE +FPS M+ E Sbjct: 538 SLGTFLNEVVLLTDQDTEGVVGDYVTLMTVHAAKGLEFKHIFIVGMEENLFPSMMNATEQ 597 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 G LEEERRL YV +TRA + +++A R G+ RPSRF+ EL + VE + Sbjct: 598 G-LEEERRLFYVAITRAKESCHISFAAERSRNGRTERSRPSRFLQELDDAYVERRVPQEM 656 Query: 650 V---------------------------------SRPVSHQRMGTPMVENDSGYKLGQRV 676 + S + + + V Sbjct: 657 LGGHSQGDELPIHFSRSDAFERLPQPEPIRRRLVRVGSSPVHEERMVHQQIGDLCVDDTV 716 Query: 677 RHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 HA+FG G I ++EG G++++ +V+FQ G K L+ +A+L V Sbjct: 717 AHARFGIGIIESLEGEGDNAKAEVSFQQVGRKRLLLRFAKLSKV 760 >UniRef50_C1A8M7 ATP-dependent DNA helicase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A8M7_GEMAT Length = 820 Score = 827 bits (2138), Expect = 0.0, Method: Composition-based stats. Identities = 266/676 (39%), Positives = 374/676 (55%), Gaps = 4/676 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 +D+ + LN Q EAV LVLAGAGSGKTRVL RIA L+ N +P+ I+AV Sbjct: 20 LDLDAITRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTTRIARLIGTMNVAPHEILAV 79 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR RI + +G GMW GTFH L R+LR Q+F I D +D + Sbjct: 80 TFTNKAAGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGVAPLVGREQNFTIYDEDDAI 139 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 +KR+++ NL K++ P+ + I+S K+ + P + VY + Sbjct: 140 GAVKRVMERRNLSPKEFAPKAILSAISSAKNALISPSEFARNARDTFATAVAGVYTDLEV 199 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 A +A V F +LL+ + HY+ RF +LVDE+QDTN QY +++L+ G Sbjct: 200 ALQQANAVTFDDLLVLPVRALETDEALRAHYQRRFRYLLVDEYQDTNAAQYRFVQLMGGG 259 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 VM+VGDDDQSIYGWRGA + NI F DFPGA +RLE+NYRST N+L+ ANA+I Sbjct: 260 YRNVMVVGDDDQSIYGWRGADIRNILDFERDFPGARIVRLEENYRSTPNVLALANAVIAE 319 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNA 358 N R GK L GE ++L A +E DEA F+ I + A +CAILYR+NA Sbjct: 320 NTERRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTRMSRSDLARRDCAILYRTNA 379 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR +E+A + ++PYR+ G +RF++R+EI+D ++YL+L+AN DD AF R VN P RG+ Sbjct: 380 QSRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVANPADDEAFRRAVNVPKRGL 439 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 GD T+ ++ + + + + + A +AL+ F L+ L D + Sbjct: 440 GDATIALLAEQAIAEGKPMLEMATRFDVLSGMRPAARAALEDFGNLVQRLRTMAVDAAVD 499 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE-DLMPLQAFLSH 537 +++ E G +G RIEN+ E++ + +E E L PL FL Sbjct: 500 ELLRELVQVIKYADHLRAE-GPEGLERIENVREMIAGAAEVVADEGGEVGLTPLDHFLQS 558 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 + L AG + D DAV MT+H+AKGLEFP VF+ G+E+G+FP + ++ +LEEERR Sbjct: 559 STLVAGVDKLDPNADAVTCMTMHNAKGLEFPLVFVCGLEDGLFPLARAAEDPAQLEEERR 618 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 L YVG+TRA +KL LT AE RR G+ +Y PSRF+ + E + S S Sbjct: 619 LFYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPSLAERGKTARAKSEGRSGF 678 Query: 658 RMGTPMVENDSGYKLG 673 + G G Sbjct: 679 GGYGSGYGSRRGNDDG 694 Score = 60.9 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 651 SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ--GIK 708 ++ ++ G+RV+HAKFG GTI + GSG +++++ F + G K Sbjct: 747 PARRERAPEPEDESQDAPMFRPGERVKHAKFGTGTIAELSGSGRDTKVRIDFDDEEIGRK 806 Query: 709 WLVAAYARLES 719 LV A A+LE Sbjct: 807 TLVLAQAKLER 817 >UniRef50_B1GYW6 ATP-dependent UvrD family DNA helicase PcrA n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYW6_UNCTG Length = 772 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 276/776 (35%), Positives = 406/776 (52%), Gaps = 62/776 (7%) Query: 3 VSYLL-DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 + +L +LN Q EAV L++ AGAG+GKTRV+ HRIA+L+ S++AVT Sbjct: 1 MKEMLTKNLNPSQAEAVLCTEGPLIIFAGAGTGKTRVITHRIAYLL-SLGVVSQSVLAVT 59 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTNKAA+EM+ RI L+ +WV TFH LRA +L F I D DQ Sbjct: 60 FTNKAASEMKKRISDLIPGVGVNVWVSTFHSFCAHFLRAEASRISLNPYFLIYDFIDQKS 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW----QKVYQAY 177 ++K +K +N+DEK++ I+ KD P + + + K+Y+ Y Sbjct: 120 VVKDCVKELNIDEKKFKLSIIADKISRAKDNLKFPSDMAAEAESAGDFFGITVAKIYELY 179 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ +RA +DF +L++R +L++YRE++ I+VDE+QDTN+ QY +I+LLA Sbjct: 180 QKKLERADAMDFGDLIMRTVSALQRHSELLEYYREKYKYIMVDEYQDTNHAQYIFIKLLA 239 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V +VGDDDQS+Y WRGA + NI F D+P A++++LEQNYRST ILS AN ++ Sbjct: 240 GKYHNVCVVGDDDQSVYSWRGADINNILDFEKDYPNAKSVKLEQNYRSTPKILSTANQVV 299 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRS 356 + NN R+ K+LWT D +++ A NE DEA + I DN ++ A+ YR+ Sbjct: 300 KYNNARISKRLWTQNPDNGSVTVLKAVNENDEAVKIAELIYSNAYDNKCKFSDYAVFYRT 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSR E+ + +PY I G +RF++R EIKD ++YL+LI N ND+ +F+RV+N P R Sbjct: 360 NAQSRTFEDTFRLSRIPYAIVGTLRFYDRAEIKDVIAYLKLIYNPNDNVSFKRVINIPRR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG +++ + ++ + +++WQ+ QE L A AL F + I + Sbjct: 420 GIGKTSIETLENFAQLKNMSIWQSV-PFAQEAGLTKGPAEALNSFAQFIKDFSTLKNSGS 478 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + + ++VI DS E E + + +IEN++EL++A F N + L +L+ Sbjct: 479 VKLIVEKVITDSEYLKELEAENTPESKIKIENIQELISAVDDFEKNRSLDK--SLAGYLT 536 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 AL D + V LMTLH AKGLEF VFI G+EEG+FP S LEEER Sbjct: 537 QIALMNDADSPDESKGKVTLMTLHLAKGLEFDNVFICGLEEGLFPMGESAFNDKELEEER 596 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP--EECVEEVRLRATVSRPV 654 RL YVG+TRA + L L ++ R++YGK +++ PSRFI E +E E + R + Sbjct: 597 RLMYVGMTRARKCLYLCWSTERKVYGKIIWNMPSRFIAEAGFKDESAEMEQNRKQNFQNR 656 Query: 655 SHQRMGTPMVEND----------------------------------------------- 667 Q ++ +D Sbjct: 657 LSQGFNRTIIHSDSFGREQNFRSFNKKSFKAEIVYTNAGSYGYMSSGGEITKAERFDNPA 716 Query: 668 ---SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 S YK+G V H FG G I+ G G +L V F+ K L+A A L + Sbjct: 717 EDLSPYKIGTAVSHPVFGRGKIIEKSGVGNDLKLVVLFETGQWKKLLARIANLTLI 772 >UniRef50_A9KP66 UvrD/REP helicase n=12 Tax=Bacteria RepID=A9KP66_CLOPH Length = 807 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 274/652 (42%), Positives = 385/652 (59%), Gaps = 18/652 (2%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + DSLN +QR AV R +L+LAGAGSGKTRVL HRIA+L+ N +PY IMA+TFTN Sbjct: 2 SIYDSLNPEQRRAVEHDRGPMLILAGAGSGKTRVLTHRIAYLIEERNVNPYQIMALTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EMR R+ +++G +WV TFH R+LR ++F I D++DQ L++ Sbjct: 62 KAAKEMRERVDKIVGYGAENIWVSTFHSTCVRILRRFIETLGYDRNFTIYDTDDQKTLIR 121 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACD 182 ++K + +D KQ R + I+S KDEG+ P + + G+ + VY+ YQ Sbjct: 122 EVLKFLQIDTKQTKERVFLSAISSAKDEGISPEEFELSALGDYNKMKISNVYKEYQRRLK 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA----- 237 +DF +L+++ EL+ + L +YR RF I+VDE+QDTN IQ+ IRLLA Sbjct: 182 TNNALDFDDLIMKTVELFQSNTEALNYYRNRFRYIMVDEYQDTNTIQFKLIRLLAHSLNE 241 Query: 238 --GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + +VGDDDQSIY +RGA + NI F +FP A I+LEQNYRST NIL+AAN Sbjct: 242 YNEVEHNLCVVGDDDQSIYKFRGANIRNILDFEKEFPDAVVIKLEQNYRSTKNILNAANE 301 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILY 354 +I NN GR K LWTD DGE +S + EA VV+ IKT D G + AILY Sbjct: 302 VIHNNLGRKDKSLWTDNEDGEQVSFCQYDTDFAEATQVVDSIKTLNDQDGISFNNFAILY 361 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSRV EE ++Q S+PY+I G + F++R+EIKD L+YL+ I N D A +R++N P Sbjct: 362 RTNAQSRVFEEKMIQRSVPYKIIGSINFYQRKEIKDLLAYLKTIDNGLDGIAVKRIINVP 421 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE--T 472 RGIG TLD V + S ++ + A R L GR+ S + F+ I+ + + + Sbjct: 422 KRGIGLTTLDRVEEFSVKNNMSFYDALRHAENIPGL-GRSTSKITSFVSFIETIKSKLSS 480 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 L + +++ +G E+ E + RI N+ EL+ + E + L Sbjct: 481 DTFTLKDLMEEILEGTGYLKELEEADDESAEDRIGNINELINKIVTYEV--EATEPPTLS 538 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EG 589 FL AL A + + V LMTLHSAKGLEFP V++ GME+G+FPS MS++ Sbjct: 539 GFLEEVALVADIDSLEEDSNHVVLMTLHSAKGLEFPYVYLCGMEDGIFPSYMSINAENPE 598 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +EEERRL YVG+TRAM+++ L+ A R + G+ ++RPSRFI E+P + Sbjct: 599 LEIEEERRLCYVGITRAMKQIHLSAARQRMMRGETQFNRPSRFINEIPRYLL 650 Score = 67.4 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y +G V+H KFG+G + N+ G + V F QGIK +++++A+LE + Sbjct: 755 YGVGDTVKHIKFGQGVVTNLTKGGRDYEVTVDFGEQGIKKMLSSFAKLEKI 805 >UniRef50_UPI000051001F putative ATP-dependent DNA helicase II n=1 Tax=Brevibacterium linens BL2 RepID=UPI000051001F Length = 850 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 282/829 (34%), Positives = 405/829 (48%), Gaps = 113/829 (13%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LL LN +QREAVA S LL++AGAGSGKT VL RIA+ ++ P ++A+TFTN Sbjct: 21 ELLTGLNPRQREAVAHTGSPLLIVAGAGSGKTTVLTRRIAYALATGRAHPGEVLAITFTN 80 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM R+ ++G + MWV TFH R+LR + +F I DS+D RL+ Sbjct: 81 KAAKEMAERVRSIVGPASRAMWVSTFHSSCVRILRREAKVLGMKSNFTIYDSQDAQRLVS 140 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACDR 183 +++K + +D K++ PR + I++ K++ P N P ++ V++ Y Sbjct: 141 QILKELGIDTKKYTPRSMLHRISNLKNDLQTPDDFIPRANNPADEVLADVFKRYTSRLRL 200 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG-- 241 A DF +L+ L+ P + YR RF +ILVDE+QDTN QYA I+ LAGD Sbjct: 201 ANAFDFDDLISETVHLFGAFPEVADFYRRRFRHILVDEYQDTNPAQYALIKALAGDGAGG 260 Query: 242 ----KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 ++ +VGD DQSIY +RGA V NI F DFP AETI LEQNYRST NIL AANA+I Sbjct: 261 ATGAELTVVGDSDQSIYAFRGATVRNIMEFEKDFPNAETILLEQNYRSTQNILDAANAVI 320 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRS 356 NN R KKLWT GE I + A NE EARF+V+R+ D + A+ YR+ Sbjct: 321 SNNQDRKDKKLWTSEGTGETIVGWVAENEQAEARFIVDRVDELIDNEKYTYGDFAVFYRT 380 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NAQSR +E+AL+++ +PY++ GG RF+ER+EIKDAL+YLR++AN +DD R++N P R Sbjct: 381 NAQSRAIEDALVRSGIPYKVVGGTRFYERKEIKDALAYLRVVANPDDDVNLRRILNVPKR 440 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAG------------------------ 452 IGDRT +V + ++ + A L + L+ Sbjct: 441 SIGDRTEGIVADFADREGISFYTALGRLDEIVHLSARAKTSVAKFYDLMRDLAATAEAAP 500 Query: 453 --RAASALQRFMELIDALAQ--ETADMPLHVQTDRVIK---------------------- 486 R A+ +++L + + D ++ Sbjct: 501 LSRVIEAILEQSGYLESLQKSTDPQDESRVDNLAELVAVAEDFVATRALADATDDEDADD 560 Query: 487 ------DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++G T ++ + ++ ++ + ++AFL AL Sbjct: 561 ADAEAAETGSSTAVDEGSSAEDGDAGDSTDDAGADAADEGRDAPSAGGSSIEAFLEQVAL 620 Query: 541 EAGEGQ-ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 + Q D V LMTLH+AKGLEFP VF+ G+E+G FP S + L EERRLA Sbjct: 621 ASDTDQIPDAELGQVTLMTLHTAKGLEFPVVFLTGLEDGGFPHARSFENPSELSEERRLA 680 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR------- 652 YVG+TRA Q+L +T AETR ++G+ Y+ PSRF+ E+PE +E S Sbjct: 681 YVGLTRARQRLIVTRAETRSMWGQPQYNPPSRFLSEIPESLIEWENTGTFSSSMGGGFTS 740 Query: 653 -----------------------------------------PVSHQRMGTPMVENDSGYK 671 PV+ Sbjct: 741 GGYGGGSLGGGYASSRSGGFGSSRGSSRSSGSRSGSANSSSPVAGFPNRIRPNREVITVS 800 Query: 672 LGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G++V H FG GT+ + G G+ + V F G K L+ YA +E + Sbjct: 801 VGEKVSHESFGLGTVTEVNGVGDKTVAVVDFGSLGTKRLLLRYAPIEKL 849 >UniRef50_B5K795 UvrD/REP helicase n=5 Tax=Rhodobacterales RepID=B5K795_9RHOB Length = 837 Score = 826 bits (2134), Expect = 0.0, Method: Composition-based stats. Identities = 299/805 (37%), Positives = 418/805 (51%), Gaps = 109/805 (13%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + LN QR+AV +L+LAGAG+GKT+ L RIA LM+ P I+AVTFTN Sbjct: 35 DYFEGLNPAQRQAVETLNGPVLMLAGAGTGKTKALTCRIAHLMATGGARPDEILAVTFTN 94 Query: 65 KAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM +RIG L + GM W+GTFH + +LLR H L +F ILD++DQLRLL Sbjct: 95 KAAREMMNRIGGLTQGASDGMRWLGTFHAICVKLLRRHAELVGLKSNFTILDTDDQLRLL 154 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACD 182 K+LI+A ++DEK+WPPR I+ K++ P + + + +Y AYQ Sbjct: 155 KQLIRASSIDEKRWPPRMLAGIIDGWKNKAWTPAQVPVGESSAYDDKGIDLYAAYQHRLK 214 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 DF +LLL ++ IL Y+ F ILVDE+QDTN QY W+RLLA Sbjct: 215 ELNACDFGDLLLHMVTIFQTHADILATYQRWFKYILVDEYQDTNVAQYLWLRLLAQGHKN 274 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDDDQSIYGWRGA+V NI F DFPGA +RLEQNYRST +IL AA +I+ N Sbjct: 275 ICCVGDDDQSIYGWRGAEVGNILLFEKDFPGAHVVRLEQNYRSTGHILGAAAGVIDANKD 334 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-----NGGALAECAILYRSN 357 RLGK L+TDG DGE + L ++ +EAR++ I++ Q + L AIL R++ Sbjct: 335 RLGKTLFTDGEDGEKVRLIGHWDGEEEARWIGEDIESMQRGTRGLDAMPLNSMAILVRAS 394 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q R E+ L +PYR+ GG RF+ER EI+DA++Y RL +++DD AFER+VNTP RG Sbjct: 395 HQMRSFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRLAVSQDDDLAFERIVNTPKRG 454 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE------ 471 +GD+ + ++ T+R + L + R + + GR +AL+ ++ +D Sbjct: 455 LGDKAVQTIQITARTNGVNLIEGARLCVSGGLIKGRGGNALRELVQGLDRWHATLHGQSQ 514 Query: 472 ------------------------------TADMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 +++ + ++ + G ++ EK + Sbjct: 515 SQSNGVTRGDMADDDESVIDDGPTVEVFDGASNVNHVELAEVILDECGYTAHWQNEKTPE 574 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHS 561 R+ENL+ELV A F LQ FL H +L + D D V +MTLH Sbjct: 575 APGRLENLKELVKALENFDS---------LQGFLEHISLIMDNAK-DEEDDKVTIMTLHG 624 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAYVGVTRAMQKLTLTYAETRR 619 AKGLEFP V++ G E+G+FPSQ S+DE G LEEERRLAYVG+TRA + T+++ +R Sbjct: 625 AKGLEFPSVYLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEKHCTISFTSSRL 684 Query: 620 LYGKEVYHRPSRFIGELPEECVE------------------------------------- 642 +YG+ PSRFI ELPEE VE Sbjct: 685 VYGQWQSQMPSRFIDELPEENVEVLTPPGLYGGGFGAAGMSARANPVSEGIASTLHEKMA 744 Query: 643 -------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNM 689 + R + R ++ S + G+RV H KFG G ++ + Sbjct: 745 KADVYNSPGWRRLQSRSQQRSMSQPKESRNSVIDMKATSSFTTGERVFHQKFGYGEVMEI 804 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAY 714 EG +L + F G K +VA + Sbjct: 805 EGD----KLLIEFDKAGEKKVVAKF 825 >UniRef50_D1PL59 ATP-dependent DNA helicase n=4 Tax=Ruminococcaceae RepID=D1PL59_9FIRM Length = 871 Score = 825 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 263/714 (36%), Positives = 391/714 (54%), Gaps = 47/714 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLM--------------- 47 + LN QR+AV LL+LAGAGSGKT VLV+RIA ++ Sbjct: 16 IESKFTRLNPVQRQAVFTTEGPLLILAGAGSGKTTVLVNRIANIIRFGSAHGSKELPRTV 75 Query: 48 -------------------------SVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTS- 81 +V P++++A+TFTNKAA E++ R+ ++G + Sbjct: 76 TQQDLEDLRATVQSGRDLPRETAYLAVRPARPWNVLAITFTNKAAGELKERLRAMLGETM 135 Query: 82 QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQ 141 G + TFH R+LR P+ F I DS+DQ R+LK++ K +D+K P + Sbjct: 136 GGDVNASTFHSACVRILRRDAERIGFPKSFTIYDSDDQQRVLKQIYKDKMIDDKFLPIKS 195 Query: 142 AMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHEL 199 A+ I+S KD+ + P + + + K+Y Y AG +DF +L+ L Sbjct: 196 AVSQISSYKDKLMSPEDVAAETPRDTKAALISKIYTTYAGRLKTAGAMDFDDLIYHTVRL 255 Query: 200 WLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGA 259 ++Y+ +F ++VDE+QDT+ Q+ +RLLAG T V +VGDDDQSIY +RGA Sbjct: 256 LQTDAEAREYYQNKFRYVVVDEYQDTSIAQFHLVRLLAGGTNNVCVVGDDDQSIYKFRGA 315 Query: 260 QVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPIS 319 +ENI F F GA+TIRLEQNYRSTSNIL+AAN++I+NN GR GK LWT+ DG+ + Sbjct: 316 TIENILNFEQVFTGAKTIRLEQNYRSTSNILNAANSVIKNNTGRKGKTLWTEKGDGDKVH 375 Query: 320 LYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGG 379 Y A +E DEA + + I G L + A+LYR NAQS +E +A +PYRI GG Sbjct: 376 HYTAASEQDEASHIADVIGEHLREGAHLRDHAVLYRMNAQSNPIETYFARAGIPYRIVGG 435 Query: 380 MRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQ 439 RFF+R+E+KD SYL +I N DD R++N P R IG T+D V + + + + + Q Sbjct: 436 QRFFDRKEVKDINSYLAVIVNPRDDVRLRRIINEPARKIGASTVDKVGELAARQGVPMLQ 495 Query: 440 ACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKG 499 ++ Q L RAA++L++F E+ L + +PL VIK +G M + + Sbjct: 496 IIADVRQYPELT-RAAASLEKFYEMYRELCDLSVTIPLDEFAGEVIKKTGYEAMLKAQ-K 553 Query: 500 EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTL 559 E+G+TR+ENL +LV++ + ++ ++ L FL AL + D D+V +MT+ Sbjct: 554 EEGETRLENLGQLVSSVKTYADQNGED--ATLSGFLEEVALISDLDSYDQDADSVTMMTI 611 Query: 560 HSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRR 619 HSAKGLEFP VF+VGME+G+FP M+ +EEERRL YV +TRA ++L L+ + +R Sbjct: 612 HSAKGLEFPYVFVVGMEDGIFPGDMARYNEEDMEEERRLCYVAITRAKKELYLSTSRSRL 671 Query: 620 LYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLG 673 ++G+ + PS F+ E+ +EE + + G + G Sbjct: 672 IFGQTRRNLPSCFLSEIDPGLMEETQSPELAYSAGGFGAGYGTYSTSVPGGRSG 725 Score = 65.1 bits (158), Expect = 1e-08, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 24/63 (38%) Query: 658 RMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARL 717 + Y G V H FG G ++ +++ F G+K +A YA L Sbjct: 805 MQNATPKKQAVQYAAGDLVEHRVFGRGKVLKATPIAGDCIVEIQFDRVGVKKTMANYAPL 864 Query: 718 ESV 720 + + Sbjct: 865 KKI 867 >UniRef50_A6NZ65 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NZ65_9BACE Length = 830 Score = 823 bits (2126), Expect = 0.0, Method: Composition-based stats. Identities = 283/795 (35%), Positives = 411/795 (51%), Gaps = 90/795 (11%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVEN------CS-------- 53 +LN +QR+A A LL+LAGAGSGKT VL+HRIA LM Sbjct: 34 QNLNPEQRKAALATEGPLLLLAGAGSGKTTVLIHRIANLMKYGRGSDCDEVPEWVTAEDL 93 Query: 54 ----------------------------PYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGM 85 P+SI+A+TFTNKAA E++ R+ +++G S + Sbjct: 94 AFLEGYVAHPDPEKKAEQERLCRVDPAVPWSIIAITFTNKAAGELKERLERMLGPSANDI 153 Query: 86 WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWY 145 W TFH R+LR + F I D+ D R++K +IK NLD+K +P + + Y Sbjct: 154 WASTFHSACVRILRRDIDRLGFSKSFTIYDTADAERVIKDIIKDFNLDDKAFPAKSIVGY 213 Query: 146 INSQKDEGLRPHHIQSYGNPVEQ----TWQKVYQAYQEACDRAGLVDFAELLLRAHELWL 201 I+ KD + KVY Y++ A +DF +++L L Sbjct: 214 ISRAKDAMKLGADYLAECEKSGDYRLIKIAKVYVEYEKRLRDANALDFDDIILHTVRLLK 273 Query: 202 NKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQV 261 + ++Y+ +F +L+DE+QDTNN+QY LAG + +VGDDDQSIY +RGA + Sbjct: 274 EFDEVREYYQRKFRYVLIDEYQDTNNLQYLLASTLAGGYENICVVGDDDQSIYRFRGATI 333 Query: 262 ENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLY 321 ENI F + + GA IRLEQNYRST NIL A+NA+I NN GR GK+LWTD +G+ + Y Sbjct: 334 ENILSFESQYKGARVIRLEQNYRSTKNILEASNAVIRNNEGRKGKELWTDHGEGDKVQCY 393 Query: 322 CAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMR 381 A NE DEA++V +I G + A+LYR NAQS +E+A + +PYRI GG+R Sbjct: 394 TAMNEHDEAQYVAAQILGSFSAGRHWKDHAVLYRMNAQSNQIEQAFKRNGVPYRIIGGIR 453 Query: 382 FFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQAC 441 FF+R EIKD L+YL +I N DD +R++N P RGIG T++ + + +LW+ Sbjct: 454 FFDRAEIKDMLAYLCVINNPGDDLRLQRIINNPPRGIGATTIERAQTIAAQEGRSLWEII 513 Query: 442 RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEK 501 L +AA+ L F ++I L + + +M L + ++ +G M EQ+ + Sbjct: 514 SNARVYPELQ-KAAAKLASFTDMIAELRKLSGEMELPAFYEELVARTGYAVMLEQKNTIE 572 Query: 502 GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHS 561 +TR+EN++EL+T+ + N + L FL AL D +D V +MT+HS Sbjct: 573 DRTRLENVQELLTSINGYLENAVEP---SLAGFLDEIALYTDLDSHDPEEDCVVMMTMHS 629 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 AKGLEFP VF+VG+EEG+FP ++ E +EEERRL YV +TRA +KL +T A R L+ Sbjct: 630 AKGLEFPVVFVVGVEEGIFPGIRAIGEAEEMEEERRLCYVAMTRAKEKLYMTCASQRMLF 689 Query: 622 GKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVEND-------------- 667 G+ +RPSRF+GE+PEE VE+ R Q P + Sbjct: 690 GRTNNNRPSRFLGEIPEEYVEKSGRLPRSERTEEKQDGEQPKKKAPAWRKPAERGYSLGG 749 Query: 668 --------------------------SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 + ++ G V+H FG+G +VN+ G + +++A Sbjct: 750 GYTTYPKGTAVEPKIGGGGAKSAAGLADFRKGDMVQHKAFGKGMVVNLMPMGGDALIEIA 809 Query: 702 FQGQGIKWLVAAYAR 716 F G K L+ A Sbjct: 810 FDNVGTKKLMLKSAS 824 >UniRef50_UPI00016B20E8 ATP-dependent DNA helicase PcrA n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B20E8 Length = 702 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 253/721 (35%), Positives = 392/721 (54%), Gaps = 30/721 (4%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 D LN Q++AV LL+LAGAGSGKT+ L HRIA+++S P I+AVTFTNKAA Sbjct: 3 DKLNPIQQKAVETTEGPLLILAGAGSGKTKTLTHRIAYIISRGLAWPSQILAVTFTNKAA 62 Query: 68 AEMRHRIGQLMGTSQGG----MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 EMR R+G ++ W+GTFHG+ ++LR N+P +F I D D+ ++ Sbjct: 63 REMRERLGSMLNQDYTQRNFMPWMGTFHGICVKILRIEGGIINIPSNFVIYDESDKKGVV 122 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEACD 182 K+ +K++N+ +KQ A I+++K++ P + + P +Q ++Y+ Y++ Sbjct: 123 KQAMKSLNITDKQIKASAASGIISAEKNKMNTPEIVIANARFPYQQQIGEIYKMYEKLKR 182 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + +DF +LLL L N P + + +++ F I++DE+QDTN QY + LL D Sbjct: 183 ESNALDFDDLLLETVNLLKNHPEVRKKWQDHFKYIMIDEYQDTNAAQYLIVSLLTNDKKN 242 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY WRGA NI F DF GA+ I+LEQNYR+T IL AA +I NN Sbjct: 243 ICVVGDDWQSIYSWRGADFRNILNFEKDFSGAQIIKLEQNYRNTGAILEAAQNVIIKNNQ 302 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSR 361 R KK+WT G G+P+ +Y A ++ EA ++ N I ++G + AILYR+N+QS Sbjct: 303 RTDKKIWTAGNQGDPVEVYSALDDKSEAAWIANVISNKVESGEYNFDDFAILYRTNSQSY 362 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E+AL Q S+P I GG RFF+R IKD ++Y+RL ND ++F R+ N P+RG+G Sbjct: 363 TIEQALNQRSIPLNIVGGTRFFDRAVIKDIMAYVRLCYQPNDMSSFMRIANVPSRGVGPT 422 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA-QETADMPLHVQ 480 +L ++ + A ++ + + RA +ALQ + + + + Sbjct: 423 SLAKFISWQGQTEMDIISALKQSGEATTITARARNALQELGCKLQIIRSEILNNTAPSDI 482 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 ++VI +G R + + + E L L+ +R ++ ++ +L +L Sbjct: 483 LEKVIDKTGYRDYIL-DGSPQAEDNNEYLNTLIDESRPYAD---------IETYLEEVSL 532 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD-EGGRLEEERRLA 599 + + + V LMTLH+AKGLEFP VF+ GMEEG+ P +LD LEEERRL Sbjct: 533 MSSSD-LQSEKGYVTLMTLHAAKGLEFPVVFMSGMEEGILPHSRTLDGNPDDLEEERRLC 591 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YVG+TRA ++L L+++ +R + + Y+ PSRF+ + V Sbjct: 592 YVGMTRARERLYLSHSASRYQFNQRKYNDPSRFLCDAGLFIVNN-------ESQEEAYVE 644 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 +D ++G RV+ A FG GT+ +++G +QV F K L YA+LE Sbjct: 645 SYDTFYDDINLEIGTRVKSAVFGVGTVEDIDGMA----VQVGFDSGQSKKLNIEYAQLEI 700 Query: 720 V 720 + Sbjct: 701 I 701 >UniRef50_B0VGK7 Superfamily I DNA and RNA helicases n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VGK7_9BACT Length = 732 Score = 819 bits (2117), Expect = 0.0, Method: Composition-based stats. Identities = 252/716 (35%), Positives = 412/716 (57%), Gaps = 6/716 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ ++ LN++Q E V + +LVLAGAGSGKTR L++R A+L+ + P++I+ V Sbjct: 8 MNNNFYASQLNERQLEVVTDTENPVLVLAGAGSGKTRSLIYRTAYLIKEKQVHPWNILIV 67 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++ R+ +L+ +WVGTFH + R+LR +F I D + Q Sbjct: 68 TFTNKAARELQERLEKLLNIPVRSLWVGTFHAICCRILRFESAHLPFNANFSIYDEDTQK 127 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 LLK++ K D++ +P + I+ K++ + P I+ G + + Y+ Sbjct: 128 SLLKKIYKEYGFDKQSFPINNILTRISRYKNKLMLPEDIKFQGEDKDSEFATFLNIYRLY 187 Query: 181 CDRAGLV---DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + L DF ++LL +L LN + + YR +F +++DE+QDTN Q+ + +A Sbjct: 188 QQQLLLNQALDFDDILLWTAKLLLNNNTVREKYRAQFQYVMIDEYQDTNKAQFEIVHQIA 247 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G +V +VGDDDQ+IY +RGA + NI F D+ +IRLEQNYRST NIL+ ANA+I Sbjct: 248 GGHQRVCVVGDDDQAIYSFRGASLRNILEFEKDYNSVHSIRLEQNYRSTGNILALANAVI 307 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN R K+LW++ G+ L NE++EA + + I Q G L E A+LYR+N Sbjct: 308 ANNRRRHSKELWSELPVGDKPVLAVYENEIEEANRITDAILKLQRKGIPLREIAVLYRTN 367 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSRV E AL+QA +PY I GG++F++R+EIKD L+YL +++N ND+ + R++N P RG Sbjct: 368 AQSRVFESALIQAEIPYSIVGGVQFYQRKEIKDLLAYLYVLSNLNDNESLLRIINEPARG 427 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG +++ + + +++L+ A + + + L A + F +++ Q + P Sbjct: 428 IGQTSINRLIGFANKTRISLFSAIQNVEAIEELGNPAKKRISEFCLMLERWQQSVSRKPA 487 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN--EEDEDLMPLQAFL 535 ++++ L + Y+ + R ENL E VT+ +FS + +E+E + +L Sbjct: 488 LEMVKTIVEELELISHYQNSNDPQDIARAENLVEFVTSVSEFSEHFYQENEREPLIADYL 547 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + AL+ + D+++LMTLH+AKGLEF VFI G+E+ + P +M ++ +EEE Sbjct: 548 PYVALQTDLDRVKENMDSIRLMTLHNAKGLEFEAVFIAGLEDELLPHRMCMNNQDSIEEE 607 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA L L+Y ++RRLY + PS+F+ E+ +++P Sbjct: 608 RRLFYVGITRAKNYLHLSYTKSRRLYDTFYFPVPSQFLTEVDSRLFYHSDGDFGIAQPPK 667 Query: 656 H-QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 ++ + E+ YK+GQ+V H ++G G I++++G GE +RL ++F + K + Sbjct: 668 RIKKTNKVITESQKYYKIGQKVFHPEYGLGVILSVDGEGEDARLTISFGNRLAKII 723 >UniRef50_A5GA79 UvrD/REP helicase n=10 Tax=Desulfuromonadales RepID=A5GA79_GEOUR Length = 678 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 258/678 (38%), Positives = 383/678 (56%), Gaps = 14/678 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +Q AV LLVLAGAGSGKT V+ +RIA L+ + +I+AVTFTNKA Sbjct: 4 LSTLNPQQLAAVKHTEGALLVLAGAGSGKTGVITYRIAHLLLNKKVPAMNILAVTFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ L+G G+ + TFH L R+LR + ++F I + DQ+ L+K+ Sbjct: 64 AKEMRERVDSLVGRQACKGIIISTFHSLGVRILRRNIELLGYKRNFSIYSTSDQIGLVKQ 123 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRA 184 +++ +N+D K++ +W I++ K++ + P +G+ E +VY YQ A Sbjct: 124 IMREVNIDGKKYDADSIIWKISAAKNKLIPPDRFTPRFGDEYELMAAEVYPRYQSALKAF 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF ++++ +L N P +LQH++ERF ++VDE+QDTN QY + LLAG G + Sbjct: 184 NAIDFDDIIMLTADLLQNHPEVLQHWQERFRYVMVDEYQDTNASQYLLVNLLAGGYGNLC 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA V NI F DF ++LEQNYRST NIL AAN +I +N R Sbjct: 244 VVGDDDQSIYGWRGADVGNILDFEKDFKECRVVKLEQNYRSTGNILEAANHVIGHNAKRK 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVL 363 K+LWT G P+ L ++ +EA VV R++ + A ++ AILYR+NAQSR Sbjct: 304 EKRLWTASGSGRPLDLIVMQDDEEEATTVVERMQMERFKHNLAYSDFAILYRTNAQSRPF 363 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 EE L +PY + GGM+F+ER+E+KDA+SYL++I N ND+ A R+VN P RGIGD T+ Sbjct: 364 EEQLRFEDIPYVLIGGMQFYERKEVKDAISYLKVIGNSNDEIALLRIVNFPRRGIGDSTV 423 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHVQTD 482 + Q S ++ L +A + + + + + +Q F L+ +E + + L + Sbjct: 424 VKINQWSMEQGCPLLEAFGRVNEIEGIVEATRNRVQDFYRLLQGAVEEFSGEGDLAEKGR 483 Query: 483 RVIKDSGLRTMYEQEKGEKGQTR--IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 R+ K GL + + R +EN+E+++ + + L FL +L Sbjct: 484 RLFKQLGLEDELYRTIDDPALARRKVENVEQIINSMAAYEERIPKPT---LSGFLEKVSL 540 Query: 541 E-----AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +G+ + + +DAV LM+LHS+KGLEFP VF+VGMEE + P + S+ E ++EE Sbjct: 541 MDEDRFSGKDKKEHGRDAVTLMSLHSSKGLEFPYVFLVGMEEEILPHKRSIYEDFTVDEE 600 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA + L +T R+ YGK PSRF+ E+P + E + A Sbjct: 601 RRLCYVGITRARKHLIMTRCLQRKKYGKLQERVPSRFLEEIPGHLLNEQKGAAAKVLTEE 660 Query: 656 HQRMGTPMVENDSGYKLG 673 LG Sbjct: 661 EADKMAHDSFARIKAMLG 678 >UniRef50_B1XW04 UvrD/REP helicase n=41 Tax=Bacteria RepID=B1XW04_POLNS Length = 788 Score = 816 bits (2109), Expect = 0.0, Method: Composition-based stats. Identities = 345/795 (43%), Positives = 476/795 (59%), Gaps = 88/795 (11%) Query: 4 SYLLDSLNDKQREAVAAPRSN-------LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYS 56 S LL +LN +QREAV P N L+LAGAG GKTRVL RIAWL+ SP Sbjct: 3 SDLLANLNPEQREAVTLPPVNENGQSQSALILAGAGGGKTRVLTTRIAWLIQTGQVSPIG 62 Query: 57 IMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 ++AVTFTNKAA EM R+ ++ + GMW+GTFHGL +RLLRAHH +A LP FQILD+ Sbjct: 63 VLAVTFTNKAAKEMMLRLSAMLPINTRGMWIGTFHGLCNRLLRAHHKEAGLPSTFQILDT 122 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQA 176 +DQL +KRL+K + +D++++P +Q ++I K+ G R + S G+ + ++Y A Sbjct: 123 QDQLSAIKRLLKGLKVDDEKYPAKQLQYFIAHAKERGQRAKDL-SVGDDFQAKMAQLYAA 181 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E C R G+VDFAELLLR++EL + I HY+ERF +IL+DEFQDTN +QYAW++LL Sbjct: 182 YDEQCQREGVVDFAELLLRSYELLKHSEAIRTHYQERFRHILIDEFQDTNALQYAWLKLL 241 Query: 237 AG-----------DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRS 285 +G + V VGDDDQSIY +RGA VEN++ + + ++LEQNYRS Sbjct: 242 SGHDASSINVSGMGSSSVFAVGDDDQSIYAFRGADVENMRLYEKQYHPL-MVKLEQNYRS 300 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 +IL AN LI NN+ RLGK L TD GEP+ +Y A ++ EA ++V+ IK ++G Sbjct: 301 HGHILDTANHLIANNSERLGKNLRTDADHGEPVRIYEAPSDHAEAAWLVDEIKALVNSGI 360 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 E A+LYRSNAQSR++E AL A +PYR+YGG+RFFER EIK AL+Y RL+ N NDD Sbjct: 361 KRTEVALLYRSNAQSRIIEHALFSAGIPYRVYGGLRFFERAEIKHALAYSRLLENPNDDT 420 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELI 465 +F RVVN PTRGIG R+++V++ +R +Q +L+ A L G+A +AL F+ L+ Sbjct: 421 SFSRVVNFPTRGIGARSIEVLQDAARAQQCSLYLAA------STLEGKAGAALGGFVRLV 474 Query: 466 DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEED 525 D + + T L + VI+ SGL Y E+ +GQ R+ENL+EL+ A F E Sbjct: 475 DHMREATRHNTLPETVEFVIQHSGLIQHYLSER--EGQDRVENLQELINAATAFIAEEGY 532 Query: 526 E-----------------DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFP 568 ++ PL AFLSHA+LEAG+ QA QDAVQLMT+HSAKGLEF Sbjct: 533 GQDAAAAMLSGENAPGVAEVSPLAAFLSHASLEAGDNQAQAGQDAVQLMTVHSAKGLEFT 592 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VFI G+EEG+FP + S++E LEEERRL YV +TRA ++L L++ ++R L+G+ Y+ Sbjct: 593 SVFITGLEEGLFPHENSVNEQNGLEEERRLMYVAITRAKERLYLSHTQSRMLHGQVRYNM 652 Query: 629 PSRFIGELPEECVEEVRLRATVSRPVSHQRMGT--------------------------- 661 PSRF+ ELP + ++ + +A +R Sbjct: 653 PSRFLEELPSDSLKWLTPKARDARWGGGNLRSGSTRQDGYTRQREYESNDFFDSGSDHQR 712 Query: 662 ----------------PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 + + +GQ V H KFGEG + +EG +R QV F+ Sbjct: 713 PAKRVGSASMEVKRLISPPRGNYPFTIGQNVFHTKFGEGHVTGLEGVDADARAQVNFKRH 772 Query: 706 GIKWLVAAYARLESV 720 GIKWL + A+L ++ Sbjct: 773 GIKWLQLSIAKLVAI 787 >UniRef50_Q1DC55 ATP-dependent DNA helicase PcrA n=2 Tax=Cystobacterineae RepID=Q1DC55_MYXXD Length = 783 Score = 815 bits (2106), Expect = 0.0, Method: Composition-based stats. Identities = 287/774 (37%), Positives = 420/774 (54%), Gaps = 66/774 (8%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LL+ LN QREAV LLVL+GAGSGKTRV+ R+A+L+ V N P+ I+AVTFT Sbjct: 9 SALLEDLNAPQREAVLHGDGPLLVLSGAGSGKTRVITRRVAYLVKVHNVYPWRILAVTFT 68 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ QL+G + V TFH A ++LR L + F I D DQL ++ Sbjct: 69 NKAAREMRERLVQLLGAQANELVVSTFHSAAAQILRREAEHVGLTRSFVIYDDSDQLNVV 128 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQEACD 182 KR ++ ++ PR+ + I+ +K+ P H+Q + G+ Q +KVY AYQE Sbjct: 129 KRAMREAGIES--MQPREILHRIDQEKNAARLPEHMQVAPGDERGQLVRKVYAAYQERLR 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA-GDTG 241 A VDF +LLL L+ +P +L++YR RF ++LVDEFQDTN +QYA ++ LA + Sbjct: 187 AANAVDFGDLLLLLVTLFRTRPDVLENYRRRFHHVLVDEFQDTNPVQYALLKQLAPPPSA 246 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 +++VGDDDQSIY WRGA V+NI F +PGA+ ++LEQNYRS NIL AA+ +I N Sbjct: 247 NLVVVGDDDQSIYRWRGADVDNILGFPRQYPGAKVVKLEQNYRSDQNILDAAHEVIRKNT 306 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQS 360 R+ KKLW++ G+ ++L +E E + V +I Q G L+ A+ YR+NAQS Sbjct: 307 RRMEKKLWSERQRGQTLNLMLNRDERAEGQEVARQILALQREGFIKLSSMAVFYRANAQS 366 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 RVLEEAL A +PY + G F++R E++DA +YLRL+ N DA R++N P RGIGD Sbjct: 367 RVLEEALRLARVPYTLVSGRSFYDRAEVRDASAYLRLMVNPRSDADLLRIINIPARGIGD 426 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-PLHV 479 T++ V + R ++L++ + Q AL G A L+ F L+++L Sbjct: 427 TTVERVTDFANARGVSLYEVLSQPEQIPALNGAAVKRLKGFRNLLESLTAFAQTNEEAAG 486 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE------------- 526 D++++++ L + E ++ QTR ENL E + A ++F N Sbjct: 487 AVDQMLRETKLVETLQAEGSDESQTRAENLREFLGAAQEFDLNRAAAAVAAAANPPSDVP 546 Query: 527 ----------DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 D+ LQAFL +L A+ V LMTLH+AKGLEF VF+ GME Sbjct: 547 PEVDAAPLTADVPALQAFLEQISLVGEAD-AEVGDGRVALMTLHAAKGLEFDAVFLTGME 605 Query: 577 EGMFPSQMSLDEG---------------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 E +FP ++ + EERRL YVG TRA ++L ++ A+ R L+ Sbjct: 606 ENVFPHSRAVKSESTFLNEVASADGEPSEEMAEERRLCYVGFTRARKRLFVSLAQCRSLF 665 Query: 622 GKEVYHRPSRFIGELPEECV--------------------EEVRLRATVSRPVSHQRMGT 661 G+ Y+ PSRF+ ++P R + Sbjct: 666 GELRYNAPSRFLRDVPPALFGISEQEVPEAPRPMVPSTQRRRTWDEDDGPRIDRSYSQAS 725 Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAAY 714 ++ G G RVRH +FG G +V+ +G+G ++++ V F G G+K ++A + Sbjct: 726 SDMDGVGGDVRGMRVRHEQFGVGRVVSADGNGPNAKVTVEFGGGVGLKRIIARF 779 >UniRef50_UPI0000E87DAA UvrD/REP helicase n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87DAA Length = 725 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 323/735 (43%), Positives = 457/735 (62%), Gaps = 25/735 (3%) Query: 1 MDVSYLL------DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSP 54 M ++ L LN KQ+EAV + L+LAGAGSGKT+VL R AWL+ + SP Sbjct: 1 MGMNDLTINKQQGQELNLKQQEAVTLSDQSALILAGAGSGKTKVLTSRFAWLIQNQIASP 60 Query: 55 YSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQIL 114 I+AVTFTNKAA EM RI + + GMWVGTFHGL +R L+ H+ DA+LPQ FQIL Sbjct: 61 GGILAVTFTNKAAKEMLVRISAQLPINPRGMWVGTFHGLCNRFLKKHYQDASLPQIFQIL 120 Query: 115 DSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVY 174 DS DQ +KR++K MN+DE P ++ +++IN K+EG+R + +++ + E+ +Y Sbjct: 121 DSADQKSAIKRVMKKMNIDEDFLPSKEVLYFINGNKEEGVRSNAYKAFDDISEKKNA-IY 179 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 +AY++ C + G+VDFAELLLR EL+ NKP I +HY+ F +ILVDEFQDT+ +QY W++ Sbjct: 180 KAYEDQCLKEGVVDFAELLLRCLELFQNKPMIREHYQSIFKHILVDEFQDTSKLQYEWLK 239 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 LL + VGDDDQSIYG+RGA+ N++ DF I+LEQNYRS +NIL+AAN Sbjct: 240 LLTAKNSFIFAVGDDDQSIYGFRGARPGNMKDLQKDFKINNIIKLEQNYRSKNNILNAAN 299 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILY 354 A+IENN RLGK LW++ DG+ I Y A ++ E ++++ IK +G + AILY Sbjct: 300 AIIENNADRLGKNLWSEAGDGDLIRQYNALDDRFETSYILDEIKGLHRSGSRYDQIAILY 359 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSRV+E A++ ++PYR+YGG+RFFER EIK +L+YLRLI N+ DD AF R++N P Sbjct: 360 RNNAQSRVIEMAMVSNNIPYRVYGGLRFFERAEIKSSLAYLRLITNKKDDTAFLRIINFP 419 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG + L++++ + +++LWQ+ + E + + F+ LI + + Sbjct: 420 PRGIGAKALELIQDVANAEKISLWQSAERIESENK-----NTKISFFVHLIRHIEDQIEG 474 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF---------SYNEED 525 + D + S L+ Y ++ + G +RIENL+ELV+A + + D Sbjct: 475 NNIDESIDFINSYSTLKDHYGKD--KDGSSRIENLDELVSAAKAYINEFREENTENESGD 532 Query: 526 EDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS 585 L FL +LE+GE QA DA+QLMT+HS+KGLEF VFI G+EEG+ P + S Sbjct: 533 SKASILSDFLDFTSLESGELQASAGDDALQLMTIHSSKGLEFDTVFITGLEEGLCPHERS 592 Query: 586 LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 L E LEEERRL YV VTRA QKL LT A++R YG+ +Y+ PSRF+ E+P E V+ + Sbjct: 593 LSENNGLEEERRLMYVAVTRARQKLYLTLAQSRLTYGQTMYNLPSRFLDEIPNELVKRIN 652 Query: 646 LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ 705 + + E +K+G V HAKFG G + EG+ R+Q+ F Sbjct: 653 APKKSFAISTAKI--ATHSETKHAWKIGAAVEHAKFGVGIVTGYEGNENDLRVQINFHSY 710 Query: 706 GIKWLVAAYARLESV 720 G+KWL YA+L + Sbjct: 711 GVKWLAMEYAKLAEI 725 >UniRef50_Q72IS0 DNA helicase uvrD n=3 Tax=Thermus thermophilus RepID=Q72IS0_THET2 Length = 692 Score = 814 bits (2104), Expect = 0.0, Method: Composition-based stats. Identities = 277/721 (38%), Positives = 386/721 (53%), Gaps = 37/721 (5%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL LN+ QR+AV LV+AGAGSGKTR +VHR+A+L++ P I+AVTFT Sbjct: 3 DALLAPLNEAQRQAVLHFEGPALVVAGAGSGKTRTVVHRVAYLVARRGVFPSEILAVTFT 62 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ L+ G +WV TFH A R+LR + L F + D +DQ LL Sbjct: 63 NKAAEEMRERLRGLVP-GAGEVWVSTFHAAALRILRVYGERVGLRPGFVVYDEDDQTALL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAYQ 178 K ++K + L + P + + + K+ G+ + + Y V YQ Sbjct: 122 KEVLKELALSARPGPIKALL---DRAKNRGVGLKALLGELPEYYAGLSRGRLGDVLVRYQ 178 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 EA G +DF ++LL A L +L+ R+R I VDE+QDT+ +QY + RLLAG Sbjct: 179 EALKAQGALDFGDILLYALRLLEEDEEVLRLVRKRARFIHVDEYQDTSPVQYRFTRLLAG 238 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +M VGD DQ IY +R A ++NI F D+P A RLE+NYRST IL ANA+I Sbjct: 239 EEANLMAVGDPDQGIYSFRAADIKNILDFTRDYPEARVYRLEENYRSTEAILRFANAVIV 298 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N RL K L GEP+ LY A + +EARFV I G A+LYR+NA Sbjct: 299 KNALRLEKALRPVKRGGEPVRLYRAEDAREEARFVAEEIARL---GPPWDRYAVLYRTNA 355 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LE+AL +P R+ GG+ FFER E+KD L+Y RL N D + +RV+NTP RGI Sbjct: 356 QSRLLEQALAGRGIPARVVGGVGFFERAEVKDLLAYARLALNPLDAVSLKRVLNTPPRGI 415 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T V+ ++++ L W+A +E + L+ F+ L++ L P Sbjct: 416 GPATWARVQLLAQEKGLPPWEALKEAARTFPRP----EPLRHFVALVEELQDLV-FGPAE 470 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +++ + + E + R+EN+EEL+ A ++ LQ FL Sbjct: 471 AFFRHLLEATDYPAYLREAYPEDAEDRLENVEELLRAAKEAED---------LQDFLDRV 521 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL A + + V LMTLH+AKGLEFP VF+VG+EEG+ P + S+ LEEERRL Sbjct: 522 ALTAKAEEPAEAEGRVALMTLHNAKGLEFPVVFLVGVEEGLLPHRNSVSTLEGLEEERRL 581 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YVG+TRA ++L L++AE R +YG+ RPSRF+ E+ E E P H+ Sbjct: 582 FYVGITRAQERLYLSHAEEREVYGRREPARPSRFLEEVEEGLYEVYDPYRRPPSPPPHRP 641 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 G+RV H +FG GT+V +G + V F+G G+K L YA L+ Sbjct: 642 RPGAFRG-------GERVVHPRFGPGTVVAAQGD----EVTVHFEGFGLKRLSLKYAELK 690 Query: 719 S 719 Sbjct: 691 P 691 >UniRef50_C1SJ11 DNA/RNA helicase, superfamily I n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJ11_9BACT Length = 703 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 277/714 (38%), Positives = 401/714 (56%), Gaps = 13/714 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + D LN Q EAV LLVLAGAG+GKTRV+ +RIA L++ +I+AVTF Sbjct: 1 MPDYKDELNKAQYEAVTTTEGPLLVLAGAGTGKTRVITYRIAHLINNMRVPSRNILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ RI +L+ +W+GTFH + RLLR A L F ILD +D+L Sbjct: 61 TNKAAGEMKERILKLVDYEDADIWIGTFHSICLRLLRRDPEKAGLEPGFGILDQDDRLAT 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 ++ +IK +N+D K++PP++ M I++ K+ RP+ + + V+ AYQ+ Sbjct: 121 IRDIIKNLNIDHKKYPPKKYMNTISTYKNT--RPYVDGKKPEELLHMFADVFAAYQQRLK 178 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 LVDF ++L ++ N P + +Y+E F ILVDE+QDTN+IQ+ ++ LLAG G Sbjct: 179 DQKLVDFDDMLALTIRMFKNHPDTVGYYKELFRYILVDEYQDTNDIQFLFLHLLAGLDGN 238 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIYGWRGA + NI F F G + IRL +NYRS IL AAN LI NN Sbjct: 239 LCVVGDDDQSIYGWRGADIRNILEFDTIFKGTKIIRLLENYRSRPQILQAANKLIRNNKL 298 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R GK L +G + + E DEA FV++++ + + G +E AILYR+N QSR Sbjct: 299 RKGKDLVAARDEGGLVQVLPVSRETDEAEFVIDQVNKYLEEGVKGSEIAILYRTNGQSRN 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 E L + + Y++ G + F++R+EIKD LSYLRL N D +F R V P RGIGD T Sbjct: 359 FEVLLNRQGVAYKVIGSVGFYQRREIKDILSYLRLFDNPYDSVSFRRSVKAPPRGIGDTT 418 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ + + +++ +A + + L G + + ++++ + LA + Sbjct: 419 INKITDYASGNGISILEAVYAMNDQ--LRGAQKESFRGYLKIFNELAACLKVSEMVKTVM 476 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + SG YE E ++ + RI N+EEL A F + D + FL+ A+ Sbjct: 477 DMTDYSGYVKRYEDE--QEAERRISNIEELYNAAVSFENSNSD---AMITDFLAATAIAT 531 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 + VQLMT+HSAKGLEF VF+ G+E G+FP SL+E LEEERRL YVG Sbjct: 532 SSD--EPADSCVQLMTIHSAKGLEFESVFLTGLENGLFPLHGSLEEPDELEEERRLCYVG 589 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 VTRA Q L +TYA TR +YGK + S F+ E+ V R R+ + P + + Sbjct: 590 VTRAKQNLHMTYASTRMVYGKYMPQSRSVFLDEMG--IVGFSRSRSDMPLPKASRPTYQK 647 Query: 663 MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYAR 716 V +G K G +V H KFGEG +V + G+G+ + V F+ G+K + + + Sbjct: 648 KVVEVNGIKNGSKVSHDKFGEGMVVAISGTGDSANADVFFKTSGLKKIRVTFLK 701 >UniRef50_B4UKQ6 UvrD/REP helicase n=4 Tax=Anaeromyxobacter RepID=B4UKQ6_ANASK Length = 797 Score = 811 bits (2096), Expect = 0.0, Method: Composition-based stats. Identities = 298/784 (38%), Positives = 401/784 (51%), Gaps = 74/784 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LL LND QREAV LLVLAGAGSGKTRV+VHRIA L+ P+ ++AVTFT Sbjct: 10 EDLLQDLNDAQREAVLHDDGPLLVLAGAGSGKTRVIVHRIARLVRDRGVVPWHVLAVTFT 69 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ +L+G +WV TFH R LR A L F I D +DQLRL+ Sbjct: 70 NKAAGEMRERLERLLGPLARELWVQTFHAFGARFLRREAARAGLSPSFAIYDDDDQLRLV 129 Query: 124 KRLIKAMNLDEKQ-WPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 K L+ + LDE + PRQ + I+ K++ LR ++ G +P ++VY Y++A Sbjct: 130 KGLLSELGLDEGEGLTPRQVLSQIDRWKNQALRAAEVKVAGLDPETARAKEVYHRYEQAL 189 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 RAG VDF +LLLR L + + RF +LVDEFQDTN +QY ++LL G Sbjct: 190 ARAGAVDFGDLLLRPVRLLEEDAALRARWAGRFRYLLVDEFQDTNPVQYRLLQLLTGPRR 249 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V +VGDDDQ+IY WRGA V NI F DFPG + ++LEQNYRST IL AA+A+I Sbjct: 250 NVCVVGDDDQAIYRWRGADVSNILGFDGDFPGTKVVKLEQNYRSTRTILDAAHAVISRAR 309 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K+LWT+ G P++L +E EA + + + G + E A+LYR+NAQSR Sbjct: 310 RRREKRLWTESGAGAPLALLVGEDEHAEAERIARAVAAERGRGTSGDEIAVLYRTNAQSR 369 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 LE A+ A +PY I G F+ER E++DA +YLRL + D ERVVN P RGIG + Sbjct: 370 PLEAAMRAARIPYVIVRGTSFYERAEVRDAAAYLRLALSPASDLDLERVVNRPPRGIGGK 429 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ +R + R L L +A E L A AL F L+ LA + + V Sbjct: 430 TVERLRAHAAARGLPLVEAVAERDAVAELKPAARRALAEFHALVTGLAADVPALDAGVAV 489 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY---------NEEDEDLMPLQ 532 V+K SG+ + E+E ++ R ENL ELV A R+F + E+ PL Sbjct: 490 QEVLKRSGMLSRLEEEHTDEAVERAENLAELVAAAREFDESIAGEPPPGDPEEVRPPPLA 549 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM------SL 586 FL AL A T + V LMTLH+AKGLEF VF+ GME+G P + S Sbjct: 550 RFLEQIALLGEADAA-TPEGRVALMTLHAAKGLEFEAVFLAGMEDGTLPYERPWADQTSS 608 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE----VYHRPSRFIGELPEECVE 642 + L+EERRL YVG+TRA ++LT++ A R YG+ PSRF+ +LP E Sbjct: 609 ERDESLDEERRLCYVGMTRAKRRLTISLARRRIGYGENGPSYRNMEPSRFLRDLPPELFG 668 Query: 643 EVRLRATVSR-------------------------------------------------- 652 + R +R Sbjct: 669 DAVAREVRAREAAQAAPVARPPTIRRLPGALEGEPHIELDGDDLPQPPAPAPRARAAAPR 728 Query: 653 --PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWL 710 P + + G+RV HA GEG ++ + G ++ V F G K + Sbjct: 729 GEPTVDYSFDQRGDAGAAAFSRGERVAHASLGEGVVLACDAGGADAKATVRFASAGDKRV 788 Query: 711 VAAY 714 +A + Sbjct: 789 LARF 792 >UniRef50_Q1IVP8 ATP-dependent DNA helicase, Rep family n=2 Tax=Bacteria RepID=Q1IVP8_ACIBL Length = 849 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 283/847 (33%), Positives = 410/847 (48%), Gaps = 132/847 (15%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L+ LN +QREAV +L+LAGAGSGKTRV+ +RIA+L+ SP SI+A+TFTN Sbjct: 2 QFLEKLNPQQREAVETVHGPVLILAGAGSGKTRVITYRIAYLIEKVGVSPDSILAMTFTN 61 Query: 65 KAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQILDSED 118 KAAAEM+ R+ L+G + TFH R+LR +DF I D D Sbjct: 62 KAAAEMQERVEHLVGGRTLAKPVISTFHSFCVRVLRRDIEALQINGKGYRKDFAIYDESD 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAY 177 Q L+K +K + +D+KQ R + I+ K+ L P G+P + ++Y+ Y Sbjct: 122 QQSLVKSAMKRLGIDDKQLTVRNVLSRISHAKNHLLDPQEVYLQSGDPKVERIAQIYKVY 181 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + +A +DF +LLL ++L + + Y RF +L+DE+QDTN QY +R LA Sbjct: 182 ESELAKANALDFDDLLLMTNKLLKTSTEVRERYNRRFQYVLIDEYQDTNRPQYEIMRALA 241 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G V VGD+DQSIY WRGA + NI F DFP A+ +RLEQNYRST NIL AA+A++ Sbjct: 242 GTLHNVCAVGDEDQSIYSWRGADIRNILEFEQDFPEAKIVRLEQNYRSTQNILEAASAVV 301 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW----QDNGGALAECAIL 353 +NN R GK LWT+ G + Y A + +E+ FV + I + D A+L Sbjct: 302 KNNLKRKGKNLWTERMGGAKVGYYEAPDGENESLFVADYINKYLMIAHDEDDEPKRAAVL 361 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR+N+QSR+ EEA+ + + Y + GG F+ER EIKD +SYL+LI N +D A R +NT Sbjct: 362 YRTNSQSRLFEEAMRRYGIKYNVVGGFSFYERAEIKDMISYLKLIQNPSDSVALLRTINT 421 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET- 472 PTRGIG T++ + + + + L LW A +++++ + RA +AL+ F ELI Sbjct: 422 PTRGIGKTTVEQIERIALETNLPLWDALGHIVEQRLMQPRACAALKGFRELIQDARAMLY 481 Query: 473 -----------------------ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIE-- 507 ++ D + D G +E + E Sbjct: 482 GKFEERLVETAQVSKPEESDAAEPEIADEDLQDNMAFDFGELEPDAEEFSPEALGTAEEA 541 Query: 508 ---------------NLEELVTATRQ---FSYNEEDEDLMPLQAFLSHA-----ALEAGE 544 N+ E++ + E ED A + + A Sbjct: 542 APEKVEGFRSPGENANVSEVLKFLIDRTGYIKQLEAEDTPESLARIENLRELVNAAMDSR 601 Query: 545 GQADTWQD------------------AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 + +T D V LMT+H+AKGLEFP VFIVGMEEG+FPS +L Sbjct: 602 DRGETIADFLDHAALVADTDDIEAGAQVTLMTMHAAKGLEFPLVFIVGMEEGLFPSSRTL 661 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY--HRPSRFIGELPEECVEEV 644 +EEERRL YVG+TRAM+ L L+ A RR YG ++ SRF+ E+P + E++ Sbjct: 662 MNPDEVEEERRLCYVGMTRAMRILVLSRARYRRRYGTDMPDASTASRFLSEVPPQLFEDI 721 Query: 645 ----------------------------------------------------RLRATVSR 652 A+ + Sbjct: 722 GSPQKKTPVFGDDSYSTHYDYENEDQRPQYGRTKQKTSYGGGSTYNSIDNIAEFFASRGK 781 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 + + G++ GQ+V+H K+GEGT+ EG GE +++ V F G+K LV Sbjct: 782 KFNRPSVPMEEPHGKRGFRPGQKVKHPKYGEGTVYQREGEGEEAKITVQFPRFGLKKLVE 841 Query: 713 AYARLES 719 +A+LE Sbjct: 842 KFAQLEK 848 >UniRef50_B0MNA1 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=B0MNA1_9FIRM Length = 792 Score = 810 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 268/789 (33%), Positives = 406/789 (51%), Gaps = 78/789 (9%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMS-------------- 48 ++ ND Q++AV +L++AGAGSGKT VL +RIA ++ Sbjct: 11 LNKYFSRTNDMQKKAVFRINGAVLIVAGAGSGKTTVLCNRIANMLLFGNAYNSNTVRELS 70 Query: 49 -----------------------------VENCSPYSIMAVTFTNKAAAEMRHRIGQLMG 79 + P++I+AVTFTNKAAAE++ R+ + G Sbjct: 71 DDDVAFAQSFLAGEIDNFDAAERLSEIFGEDRVKPWNILAVTFTNKAAAELKERLENM-G 129 Query: 80 TSQGGMWVGTFHGLAHRLLRAHHMDAN--LPQDFQILDSEDQLRLLKRLIKAMNLDEKQW 137 G+W TFH R+LR + +F I D++DQL+++K ++K N+ +K Sbjct: 130 ADVDGIWAATFHSACVRILRQDIEELGMGYKSNFTIYDTDDQLKVIKTVMKEHNISDKAV 189 Query: 138 PPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-----KVYQAYQEACDRAGLVDFAEL 192 P+ I+ KD+ + P + G +Q +Y YQ + A +DF ++ Sbjct: 190 TPKAVQNLISRSKDKLITPDKFSTKGKNGSDDYQLSTAKTIYTDYQARLEAANALDFDDI 249 Query: 193 LLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQS 252 ++ +L+ + P +L H++ RF I+VDE+QDTN QY + LLA +G + +VGD+DQS Sbjct: 250 IMLTVKLFAHCPDVLSHWQNRFRYIMVDEYQDTNAAQYKLVSLLAEGSGNLCVVGDEDQS 309 Query: 253 IYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDG 312 IY +RGA +ENI F F GAE I+LEQNYRST+ IL AANA+I NN K LW+D Sbjct: 310 IYRFRGATIENILSFEEQF-GAEVIKLEQNYRSTATILKAANAVIANNTQHKDKNLWSDL 368 Query: 313 ADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASM 372 DG+ I + E +EA F+ RI G A+ ILYR+NAQSR +E L ++ + Sbjct: 369 GDGDKIRMDRFSTEQEEAMFITERILDGVKQGKKYADHVILYRNNAQSRTVETTLAKSGI 428 Query: 373 PYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRD 432 PY+I GG+RF+ER+EIKD ++YL ++ N D+ F R+VN P RGIG TLD + + Sbjct: 429 PYKIIGGVRFYERKEIKDIIAYLCVLNNNYDEVRFGRIVNEPVRGIGAATLDELNRVVSG 488 Query: 433 RQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRT 492 ++ QA E +L+ +A L E L+Q T D+ D ++ G R Sbjct: 489 MGISYVQAMCESDSLPSLSRKA-KVLVPLGETFSELSQHTDDISDGSLIDDILDRFGYRE 547 Query: 493 MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQD 552 +++ G +G+ R+EN+ EL + F+ E L FL AL + + D Sbjct: 548 AMQRQ-GLEGEVRLENINELKSNMITFAKENEG---AGLSEFLEQVALVSDMDSFEADDD 603 Query: 553 AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTL 612 LMT+HSAKGLEF VF+VG EE +FP S + +EEERRLAYV +TRA + L Sbjct: 604 KAVLMTMHSAKGLEFDTVFVVGAEENIFPGYRSQFDPMEIEEERRLAYVAITRAKRHLYF 663 Query: 613 TYAETRRLYGKEVYHRPSRFIGELPEECV---------------------EEVRLRATVS 651 T A+ R LYG+ + ++ SRF+ E+P + + Sbjct: 664 TCAKQRMLYGQTMRNKVSRFVVEIPSQYMAYDDHTAVTASAAARSAEQMKPRTSYLQQQQ 723 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R ++ + Y G+RV H FG+GT+++ + G L++AF +G K + Sbjct: 724 RSYHAEQREMEKRVENVSYAPGERVHHGVFGDGTVLSAKAMGGDWLLEIAFDDKGTKKVA 783 Query: 712 AAYARLESV 720 A +A++ + Sbjct: 784 AKFAKMTKI 792 >UniRef50_C9LD15 ATP-dependent DNA helicase PcrA n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LD15_9BACT Length = 794 Score = 810 bits (2093), Expect = 0.0, Method: Composition-based stats. Identities = 247/663 (37%), Positives = 375/663 (56%), Gaps = 12/663 (1%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN+ QR+AV L++AGAGSGKTRVL +++A+L+ P+ I+A+TFTNKAA E Sbjct: 6 LNESQRQAVQYCDGPSLIIAGAGSGKTRVLTYKVAYLLQN-GYQPWEILALTFTNKAARE 64 Query: 70 MRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 MR RI QL+ + M W GTFH + R+LR H LP F I D+ D L+K +I+ Sbjct: 65 MRERIAQLVEPAAVAMLWAGTFHSIFARILRIEHAALGLPSTFSIYDAADAKSLVKSIIR 124 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQKVYQAYQEAC 181 + LD+K + P I+ K+ + P + + + + ++Y Y E C Sbjct: 125 ELKLDDKIYRPGTVAARISDAKNHLMLPDEYAADVDRMNRDKRDGLTELVRIYNIYIERC 184 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +A +DF +LLLR + L+ ++P I + Y +F +LVDE+QDTN +QY IR L Sbjct: 185 RQANALDFDDLLLRTYLLFHDRPDICEKYVRKFRYVLVDEYQDTNAVQYRIIRYLCPGEA 244 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 ++ +VGDD QSIY +RGA + NI F +P A+ I+LE+NYRST NI+ AAN++I N Sbjct: 245 RLCVVGDDAQSIYAFRGADIGNILNFQTHYPSAKLIKLERNYRSTENIVQAANSIISRNK 304 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQS 360 R+ K ++++ G+ + + A+ + DE+ VV I + +L + AILYR+NAQS Sbjct: 305 NRIPKTIYSENGAGDKVCIISAYTDKDESAKVVKEIFKLRRQHHISLDQVAILYRTNAQS 364 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E+AL A++PYR+YGG+ F++R+EIKD ++Y R++ N D+ A R+VN PTRGIG Sbjct: 365 RAFEDALRNAALPYRVYGGLSFYQRKEIKDIIAYCRVVCNPQDEEALLRIVNYPTRGIGQ 424 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETADMPLHV 479 T+ + +R LW + AL R L F ELI + M ++ Sbjct: 425 TTMSKLIAAARGNGEPLWSVLLAPDKFGVALNRRTLEKLYAFAELIRSFQARADVMGVYD 484 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +++ SG+ + ++ +G ++ EN++EL+ + + F +E ++ L +L Sbjct: 485 LVSELLEASGITQELQGDRTPEGLSKWENIQELLNSIKGFESEQE-TGVVLLADYLPQVV 543 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + Q D + V LMT+H+AKGLEF VF+ G+E+G+FP + LEEERRL Sbjct: 544 LLTDQDQQDDDEPKVTLMTVHAAKGLEFEAVFVTGLEDGLFPGTAAKYSARELEEERRLF 603 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV VTRA +TYA+TR +YG+ + PS F+ E+ + VE A H Sbjct: 604 YVAVTRAKAHCFITYAKTRYIYGRLEFCEPSLFLQEIDPQYVETDSSSARDFSSFGHLNN 663 Query: 660 GTP 662 G Sbjct: 664 GRM 666 >UniRef50_C5VHV2 ATP-dependent DNA helicase PcrA n=20 Tax=Bacteroidales RepID=C5VHV2_9BACT Length = 851 Score = 808 bits (2088), Expect = 0.0, Method: Composition-based stats. Identities = 237/681 (34%), Positives = 369/681 (54%), Gaps = 14/681 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +L +LN+ QREAV LV+AGAGSGKTRVL ++IA+L+ + P++I+A+TFT Sbjct: 8 EAILSALNESQREAVEYCTGPSLVIAGAGSGKTRVLTYKIAYLL-NKGLKPWNILALTFT 66 Query: 64 NKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ RI Q+ +++GTFH + R+LR +F I D D L Sbjct: 67 NKAAREMKERIAQITTAKDAQHLYMGTFHSIFARILRREGEAIGFGSNFTIYDENDSRSL 126 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT-------WQKVYQ 175 +K ++KA++LDEK + P +I+ K+ + +E+ +Y+ Sbjct: 127 IKSIVKALDLDEKTYKPASVHNFISMAKNHLITASEYAEDRAAIERDRSARMPAIHMIYK 186 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 AY+ C +A +DF ++LL L+ + I + Y ++F ILVDE+QDTN Q + I Sbjct: 187 AYEARCRQANAMDFDDILLYTFLLFRDNKEIREKYGQQFEYILVDEYQDTNYAQVSIISQ 246 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA ++ +VGDD QSIY +RGA ++NI F + F A+ +LE+NYRST I+ AAN+ Sbjct: 247 LAETHRRICVVGDDYQSIYSFRGANIDNILDFKHKFDDAKLFKLERNYRSTQLIVQAANS 306 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILY 354 L+++N ++ K +++ A+G+ I +++ +EA V N +K + N AILY Sbjct: 307 LMKHNERQIPKDVFSKEAEGDKILYKPCYSDREEAMVVANELKRIKRNDDCDYGNFAILY 366 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+NAQSR E+ + +PY+I GG+ F++R+EIKD ++Y RL++N ND+ AF R++N P Sbjct: 367 RTNAQSRSFEDEFRKQGIPYKIIGGLSFYQRKEIKDIIAYFRLVSNPNDEEAFRRIINYP 426 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETA 473 TRGIG+ T+ + ++ ++LW+ +Q + + L F LI + A Sbjct: 427 TRGIGNTTIQKIIDCAQRNSVSLWETILNPIQYGLDVNKGTMTKLFAFRTLISGFIKNVA 486 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS---YNEEDEDLMP 530 + +I++SGL + R ENLEE ++A + F E E+ + Sbjct: 487 LKDAYELGKEIIEESGLSADIRSGSEPEDLARRENLEEFMSAMQGFVDSGREEGREENVY 546 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L +L AL + D V LMT+H+AKGLEFP VF+VG+EE +FPS MS Sbjct: 547 LTDYLQEVALYTDADKEDDDTPKVTLMTIHAAKGLEFPTVFVVGLEENIFPSPMSASSKR 606 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEERRL YV +TRA + LT A+ R YG PSRF+ + + + Sbjct: 607 EIEEERRLLYVAITRAERHCILTNAKNRFRYGSMQVDNPSRFLNDFDPALIHVEDEANSA 666 Query: 651 SRPVSHQRMGTPMVENDSGYK 671 + + + + Sbjct: 667 FGGERRKMPWDEDNSSRNAWG 687 Score = 61.3 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 32/50 (64%) Query: 671 KLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 +G + H +FG G ++N+EGSGE+++ V F+ G K L+ +A+ + + Sbjct: 801 SVGVTIEHQRFGIGKVLNLEGSGENAKATVEFRNAGTKQLLLKFAKFKII 850 >UniRef50_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWK9_DICNV Length = 712 Score = 807 bits (2085), Expect = 0.0, Method: Composition-based stats. Identities = 332/722 (45%), Positives = 457/722 (63%), Gaps = 12/722 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ +L LN QR+AV + V+AGAGSGKTRVLV R+ WLM+V C PY ++A+ Sbjct: 1 MNIDTILSGLNAAQRDAVTTKERIVRVIAGAGSGKTRVLVQRMQWLMTVAGCMPYQLLAL 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ Q S +W+GTFH + R+LR + + F ++DS+DQL Sbjct: 61 TFTNKAAQEMRQRLEQSAACSLNQLWMGTFHSICLRILRQYAELVGWEKSFIVIDSDDQL 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 RL+KRL++ N +E+ + IN+ K+ GLR + + P+E YQ Y+ Sbjct: 121 RLIKRLLQKNNWNEEILSAKAVQAQINAYKENGLRAADLPTSAPPLEIAVHHFYQEYEHI 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + G +DFAELLL EL + Q + +RF IL+DEFQDTN +Q+ + L Sbjct: 181 TRQQGTMDFAELLLLTTELLAQHETVQQRFHQRFQAILIDEFQDTNTLQFKLVTQLCAPE 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ +VGDDDQSIYGWRGAQ+++I +P TIRLEQNYRST IL+AANA+I +N Sbjct: 241 TQLFVVGDDDQSIYGWRGAQIDHIVHLERYYPTVHTIRLEQNYRSTKTILAAANAVIAHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RLGK LW+DG GE I+LY A NE DEAR++V I + +GGA +CAILYRSNA S Sbjct: 301 QTRLGKTLWSDGKHGEAIALYAAVNEYDEARYLVENIAQFHQHGGAYDQCAILYRSNALS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R+ EEAL+Q ++PYRIYGG+RFFER EIKDAL+YLRL+ +DDAA ER++N P RGIG Sbjct: 361 RIYEEALIQKNIPYRIYGGLRFFERAEIKDALAYLRLLHYPDDDAALERIINQPPRGIGA 420 Query: 421 RTLDVVRQTSRDRQLTLWQAC-RELLQEKALAGRAASALQRFMELIDALAQETAD-MPLH 478 +T++ VR ++ Q +LW+ + L E+ + RA +AL++F LI + L Sbjct: 421 KTMEDVRLLAQRVQCSLWRVITDDALLEQKCSARAQNALRQFRALIIKMTAFAERSDSLR 480 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+ +SGL E+ + R ENL EL+ A + ++ D D + FL+ A Sbjct: 481 DILKMVVDESGLYAALTNNNQEETENRRENLHELI-AAGDYQSDQNDADHDKIADFLAMA 539 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L G +T VQLMTLHSAKGLEF +V++V +EEG+FP+ SL+ +LEEERRL Sbjct: 540 SL--DAGDKETNAHGVQLMTLHSAKGLEFNRVYMVALEEGLFPNARSLENSAQLEEERRL 597 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 AYVG+TRA ++LT+++AE RR YG++ Y RPSRF+ E+P E + + RPV R Sbjct: 598 AYVGITRAREQLTMSFAERRRYYGQDNYARPSRFLNEIPPELLN-------MVRPVLFNR 650 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 ++ D+ +K G V+HA+FG G I +EGSGEH R V F G KWLV AYA+L+ Sbjct: 651 TQPNDIQEDNPWKTGVCVQHAQFGTGVIQAVEGSGEHQRALVKFTTVGEKWLVLAYAKLK 710 Query: 719 SV 720 + Sbjct: 711 IL 712 >UniRef50_Q83GZ5 ATP-dependent DNA helicase n=2 Tax=Tropheryma whipplei RepID=Q83GZ5_TROWT Length = 743 Score = 806 bits (2083), Expect = 0.0, Method: Composition-based stats. Identities = 267/750 (35%), Positives = 385/750 (51%), Gaps = 41/750 (5%) Query: 1 MDVS-YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M + LL LN +Q E V LL+ AGAGSGKT+VL HRIA ++ S I+A Sbjct: 1 MTIPADLLKGLNPQQVEGVCYRGPTLLISAGAGSGKTKVLTHRIAGFLATGEASCDQILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +TFTNKAA+EMRHR G L+G S M + TFH + R+LR ++F I D+ DQ Sbjct: 61 ITFTNKAASEMRHRTGDLVGLSVRDMQISTFHSVCVRILRECVGHLGKAKNFTIYDAADQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-------------- 165 ++K++ ++ D I K++ P Sbjct: 121 RAIIKQICQST--DTFGLTASMVASQIGLLKNQMHTPDTYSRCLASNSTNGNSVTSITLQ 178 Query: 166 VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDT 225 EQ V++ YQE A DF +L+ L P I YR R+ +LVDE+QDT Sbjct: 179 REQFILHVFRRYQEILKEANAFDFDDLISETVFLLQKSPEISAMYRNRWKYLLVDEYQDT 238 Query: 226 NNIQYAWIRLLAGDTGK---VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQN 282 N+ QY I L + VGD DQSIY +RGA + NI F NDFP TI LEQN Sbjct: 239 NHAQYRLILELTKGDKSDMSLTAVGDSDQSIYAFRGADIANIVNFENDFPDCHTILLEQN 298 Query: 283 YRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD 342 YRS NIL AANALI NN R K LW++ GE + YCA + +E RFV +R++ D Sbjct: 299 YRSCQNILLAANALISNNQNRKDKNLWSELGAGEKVIAYCASSAEEEGRFVADRVRHLVD 358 Query: 343 NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN 402 G +L++ A+ YRSN QSRV+EE+L++ S+PYR+ GG +F+ER EIKD L+YL +I N + Sbjct: 359 QGESLSDIAVFYRSNTQSRVIEESLIRQSIPYRVVGGTKFYERAEIKDILAYLTVIVNPD 418 Query: 403 DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM 462 D A R++N P RG+G + + + + + R +TL QA + + + A SAL+ Sbjct: 419 DTLALRRILNVPKRGVGTVSENRLVEFASARGITLMQALSRIDEI-NIQPSAKSALRDLF 477 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 L++ A + MP + D ++K + L + + + + R N+ + V + F+ Sbjct: 478 YLLNRFA--GSSMPANELLDDLLKATDLLSRFNNTDDPQNEARKINIGDFVDSVEDFAKE 535 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS 582 L F+++ AL Q+D + LMTLH AKGLEF VF+ G+EEG+ P Sbjct: 536 NPGGT---LSDFMTNIALMTSYDQSDDAPGQITLMTLHMAKGLEFDFVFLTGLEEGILPH 592 Query: 583 QMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 +MSL E +EEERRLAYVG+TRA + L L+++ R+ Y V PSRF E+P+ + Sbjct: 593 EMSLKEKNGIEEERRLAYVGMTRAKKVLHLSFSSYRKRYTDGV-RLPSRFWDEIPQHLLR 651 Query: 643 EVRLRATVSR-------------PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNM 689 + + V+H+ FG GT+V++ Sbjct: 652 WHSRFTHKRFTGPLYGFTARPAGESRQSVHVLKNRYPRESFSISDSVKHSVFGVGTVVDV 711 Query: 690 EGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 G G + V F + + L+A+ A + Sbjct: 712 LGLGPKQIIVVEFADK-RRSLLASIAPIVK 740 >UniRef50_Q11GU4 ATP-dependent DNA helicase, Rep family n=53 Tax=Alphaproteobacteria RepID=Q11GU4_MESSB Length = 876 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 290/692 (41%), Positives = 398/692 (57%), Gaps = 63/692 (9%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L+ LN +QR AV +LVLAGAG+GKTRVL RIA +++ P I+AVTFT Sbjct: 39 PRYLEGLNPEQRLAVETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFT 98 Query: 64 NKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 NKAA EM+ RIG L+G + GM W+GTFH + +LLR H A L F ILD++DQ+RL Sbjct: 99 NKAAREMKTRIGVLVGQAIEGMPWLGTFHSIGVKLLRRHAELAGLTSSFTILDTDDQVRL 158 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEA 180 LK+LI+A LD+K+WP RQ I+ K++GL P I + +Y AYQ+ Sbjct: 159 LKQLIQAEALDDKRWPARQLAMMIDGWKNKGLGPADIPEGDARAFGNGKGRALYAAYQQR 218 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +LLL ++ P +L+ Y +F ILVDE+QDTN QY W+RLLA Sbjct: 219 LKTLNATDFGDLLLHPIRIFREHPDVLREYHAKFKYILVDEYQDTNTAQYMWLRLLAQRP 278 Query: 241 G----------------------------------------------KVMIVGDDDQSIY 254 G + VGDDDQSIY Sbjct: 279 GSPGTGGLPAEGRARGHALGDVSQAHAAGGPGASPGQRPGGASANKVNICCVGDDDQSIY 338 Query: 255 GWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDG-- 312 GWRGA+V+NI RF DFPGA IRLE+NYRST++IL AA+ LI +N GRLGK L+T+ Sbjct: 339 GWRGAEVDNILRFEKDFPGATVIRLERNYRSTAHILGAASHLIAHNEGRLGKTLFTEHSD 398 Query: 313 ADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASM 372 D + ++ A++ +EAR + I+ Q G AL + AIL R++ Q R E+ + + Sbjct: 399 PDAPRVKVHAAWDSEEEARALGEEIEALQAKGHALNDMAILVRASFQMREFEDRFVTLGL 458 Query: 373 PYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRD 432 YR+ GG RF+ERQEI+DAL+Y R++A DD AFER+VN P RG+G+ + + +R Sbjct: 459 SYRVIGGPRFYERQEIRDALAYFRVVAQGADDLAFERIVNVPKRGLGESAVRQIHDVARM 518 Query: 433 RQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRT 492 R + L QA R+L+ + L + ++L+ +E + + ++++SG Sbjct: 519 RGVPLLQAARDLVGTEELKPKPRASLRNLVESFERWQGLLDRTRHIELAETILEESGYTD 578 Query: 493 MYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQD 552 M++ ++ + R+ENL+EL+ + ++ L+AFL H AL + D D Sbjct: 579 MWKNDRSAEAPGRLENLKELIRSMEEYES---------LRAFLEHVALVMDA-ERDEELD 628 Query: 553 AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKL 610 AV LMTLHSAKGLEF VF+ G EEG+FP Q SLDEGGR LEEERRLAYVGVTRA + L Sbjct: 629 AVSLMTLHSAKGLEFDTVFLPGWEEGLFPHQRSLDEGGRSGLEEERRLAYVGVTRAKKNL 688 Query: 611 TLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 + + RR++G PSRF+ ELPE+ VE Sbjct: 689 HIWFTSNRRIHGLWQSTIPSRFLDELPEKHVE 720 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R + + + + + S +K+G RV H KFG G + ++G+ +L V F G K ++ Sbjct: 812 RTIEGELVAKSVSDGPSAFKVGDRVFHLKFGNGNVAAVDGN----KLTVDFDKAGQKRVL 867 Query: 712 AAY 714 + Sbjct: 868 DGF 870 >UniRef50_C2L0R7 ATP-dependent DNA helicase PcrA n=1 Tax=Oribacterium sinus F0268 RepID=C2L0R7_9FIRM Length = 793 Score = 805 bits (2079), Expect = 0.0, Method: Composition-based stats. Identities = 252/669 (37%), Positives = 384/669 (57%), Gaps = 14/669 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ + LN +Q EA LL+LAGAGSGKTRVL HRIA+L+ + SPY I+A+ Sbjct: 1 MELKNI---LNKEQYEAATHGEGPLLILAGAGSGKTRVLTHRIAYLILEKGISPYQILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ QL+ QG +WV TFH + R+LR + DF I D++DQ Sbjct: 58 TFTNKAAQEMRDRVNQLLPERQGEIWVSTFHSMCLRILRREIGNLGYDSDFSIYDTDDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI--QSYGNPVEQTWQKVYQAYQ 178 +++++ K + +D K R + ++ K++G + + ++ + + Y+ Sbjct: 118 TVMRQVFKELQIDSKMLKERLVLSALSQVKNQGRSVSDYLLEDPEDFLDGKIRACIRLYE 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + +DF +LLLR EL+ P +L+ Y+ERF ILVDE+QDTN++Q+ + LLA Sbjct: 178 EKLKQNNALDFDDLLLRCKELFEKFPAVLEKYQERFRYILVDEYQDTNDVQFHLVYLLAK 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY +RGA VENI F + FP + ++LEQNYRST+ IL AN +I Sbjct: 238 KYQNICVVGDDDQSIYRFRGANVENILSFESHFPNCKVVKLEQNYRSTAPILDLANVVIA 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N R KKLWT +G +S + +EA V I+ +D G + + A+LYR+NA Sbjct: 298 ENQHRKQKKLWTAEKEGLKVSFQEYESAKEEAAAV---IRGIRDAGWSYKDQAVLYRTNA 354 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+LEE + ++PY+I GG+ F++R+EIKD LSY++++ N+ DD A R++N P RGI Sbjct: 355 QSRLLEEQCIHWNIPYQIVGGVNFYQRKEIKDILSYMKILVNKKDDVALRRIINVPKRGI 414 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G+ +L ++Q + L+G+A S + F E++++ D+ L Sbjct: 415 GEASLLKLQQYGESLGGFSLVESLPFAKAAGLSGKALSMVGSFQEMLESWK----DVELS 470 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 DR+++D+ + E + ++R+EN++EL + + DE L AFL Sbjct: 471 ALIDRILQDTEYEKDLQAEGAIEAESRMENIQELQGKLQSYIEENGDEG--SLSAFLEEV 528 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + ++D +D + LMTLH AKGLEFP V++VG+ EG+FPS S+ EEERRL Sbjct: 529 SLLSDLDRSDLTEDKITLMTLHGAKGLEFPVVYLVGLNEGLFPSAQSMFTPEEREEERRL 588 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YVG+TRA ++L LT R ++G+ S F+ ++PEE +E+ L Sbjct: 589 FYVGITRAEKELYLTAGRDRVVHGQYQSMLVSSFVDDVPEEHLEKKYLYRKKPSEEDIFM 648 Query: 659 MGTPMVEND 667 T Sbjct: 649 EKTGRSGYS 657 Score = 68.6 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 33/60 (55%) Query: 661 TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + M Y++G RV H KFGEG ++ +E + + V F G K ++A +A+L+ + Sbjct: 734 SGMSSGSLDYQVGDRVSHTKFGEGEVLAIEEDKKDKLVTVLFDTAGQKKMLAGFAKLKKL 793 >UniRef50_A6CC22 ATP-dependent DNA helicase n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CC22_9PLAN Length = 755 Score = 804 bits (2078), Expect = 0.0, Method: Composition-based stats. Identities = 259/761 (34%), Positives = 394/761 (51%), Gaps = 50/761 (6%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD + L Q AV+ + LLVLAG GSGKTRV+ HRIA L+ + I+ + Sbjct: 1 MDFQQV---LTPPQFAAVSHHQGPLLVLAGPGSGKTRVITHRIASLIHAH-VPAHQILGI 56 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM R+ QL+ + + TFH ++LR + L +F I D+ DQ Sbjct: 57 TFTNKAADEMGERVRQLIPD--SRVEISTFHKFCVKILRRYGRGVGLDSNFSIFDTTDQQ 114 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQ 175 +L++ ++ +++D + P I+ K++ + +S G+ ++ +VY Sbjct: 115 QLIRFVLNELDIDTVAYNPSTIASMISRAKNDLITVDRFVEIYQESVGDHLQAVAARVYP 174 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + VDF +LLL L P + ER+ ILVDE+QDTN QY I Sbjct: 175 MYQKLLLESNAVDFDDLLLHVASLLKGSPELRATLDERYQYILVDEYQDTNLAQYQIIMG 234 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L+ +T + + GD DQSIYGWRGA++ENI +F DFP +TIRLEQN+RST IL A+ Sbjct: 235 LSLNTRNLCVTGDPDQSIYGWRGAKIENILQFERDFPDCKTIRLEQNFRSTKEILRVADD 294 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA-LAECAILY 354 LI +N R K L+T+ +G P+ L C +E EA + RI+ D G + AI Y Sbjct: 295 LISHNQRRKVKSLFTENEEGSPVELLCFQDERHEADDIARRIRNAVDQGKQEYTDYAIFY 354 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R N+ SR LE AL + +PY++ G + F+ER E+KD LSYL+L+ N +D AF R+VN P Sbjct: 355 RVNSLSRELELALARHKIPYQLAGSVAFYERTEVKDLLSYLKLVNNPDDRVAFSRIVNKP 414 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 RGIG T + + + + +R ++L +A + L+ RAA+ + RF ++I+ + Sbjct: 415 LRGIGKTTQNKLIRWADERGISLLEAAHQAADCPKLSKRAATMVARFAKMINGFS-MADS 473 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 + + +I + + +++ E Q RI N+ EL++ +++ +E L+ F Sbjct: 474 GSVAHLMENIIDSTRMVDSWKESPDEADQQRIANVNELLSTAKKYDDIYGEET--TLEGF 531 Query: 535 LSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--GRL 592 L + L + Q DT V LMTLH+AKGLE+P VFIVG+E+ + P + L E L Sbjct: 532 LEVSTLASATDQLDTDAGRVTLMTLHAAKGLEYPVVFIVGVEQNLIPHERVLREEFRDGL 591 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 EEERRL +VG+TRA Q L LT R + G+ S F+ E+ E ++ SR Sbjct: 592 EEERRLFFVGITRAEQNLYLTQTRERSMRGRPWRTITSDFLKEIDVEFNDQSTDELFESR 651 Query: 653 PVSHQRMGT--------------------------------PMVENDSGYKLGQRVRHAK 680 + + + E G+ +G RVRH + Sbjct: 652 SHFDEFVESVKRGEIDTAALKAANPERPLLMTGADLLKDAPQAAEIPQGFSVGMRVRHPR 711 Query: 681 FGEGTIVNMEGSGEHSRLQVAFQGQGI-KWLVAAYARLESV 720 +G GT++ + G + V F + VAA+ L+ + Sbjct: 712 YGVGTVMGISGFARKRMVNVLFDDADEPQTFVAAHCPLQPL 752 >UniRef50_D0RN21 ATP-dependent DNA helicase PcrA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RN21_9RICK Length = 742 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 272/749 (36%), Positives = 431/749 (57%), Gaps = 51/749 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L+SLN++Q+ AV+ L VLAGAGSGKT+VL RIA+L+ + C I+ VTF Sbjct: 1 MSSYLNSLNNQQKLAVSNTEGPLQVLAGAGSGKTKVLTSRIAYLIQQKKCFGQQILCVTF 60 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA+EMR R+ +L+ S W+GTFH + +++LR + L +F I+D+ DQ++ Sbjct: 61 TNKAASEMRERVLKLVNSKSVAFPWLGTFHSICNKMLRKNSEAVGLKPNFTIIDTLDQIK 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEA 180 L+K ++ A N+D K+ PP+Q +YI+ K++ L P ++ KVY+ YQ+ Sbjct: 121 LIKNILSAENIDIKKNPPKQIAFYIDQWKNKALLPEQVKLKNQEFNLVNALKVYKIYQKK 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 VDF +L+L + I + Y+ F ILVDEFQDTN +Q W++LL + Sbjct: 181 LLVMNCVDFGDLILHVVTILKKFEDIKKIYQRNFKYILVDEFQDTNYVQNFWLQLLTSEK 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY WRGA+V+NI F N++ +TI+LEQNYRST NIL++A +LI NN Sbjct: 241 KNICVVGDDDQSIYSWRGAEVKNILEFKNNYQNTQTIKLEQNYRSTENILNSATSLISNN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 RL K +W++ DGE + + F+ + EA V + I+ L E +IL R+ Q+ Sbjct: 301 EDRLEKNIWSELGDGEKVKIKSYFDGISEATGVSDIIEQNLSKKFKLNEISILVRAAFQT 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R EE ++ +PYRI GG++F+ER EIKDAL YLRLI +DD +FER++N P R IGD Sbjct: 361 REFEERFIKIGLPYRIIGGLKFYERSEIKDALGYLRLINQSSDDISFERIINNPKRSIGD 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 ++ + +R++ L+L+ A +E+L+E L + L+ F+ + + Q+ D+ Sbjct: 421 SSIKKIHDFAREKDLSLFDASKEILKENILKPKTIQNLKSFLVNMISWKQKCKDIDHISL 480 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + V+ +SG +M + E+ + R+ENL+EL ++ + +S L FL + +L Sbjct: 481 LEIVLDESGYSSMLKNERTPEADARLENLKELKSSMKNYSS---------LNEFLENISL 531 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLEEERRL 598 + + + + + +MT+HSAKGLEF VF+ G EEG+FP Q S+DE +EEERRL Sbjct: 532 QTAIDE-EWDGEKINIMTIHSAKGLEFDAVFLPGWEEGLFPHQKSIDEKGADGIEEERRL 590 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHR------PSRFIGELPEECVE---------- 642 AYV +TRA ++L +++A R+ YG++ + SRFI E+ ++ + Sbjct: 591 AYVAITRAKKELFISFANQRKFYGRQNDNYDFYSSLQSRFIDEIDDKYTKISIDDSTEDE 650 Query: 643 -----------------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 RL+++ + EN + + +G+ V+H FG G Sbjct: 651 FIFDQDFNIEGKKNSPGWNRLKSSFANKNEENIKTISYTENFTDFTVGETVKHEGFGLGK 710 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 I++++G+ +L + F QG K ++ + Sbjct: 711 IIHIDGN----KLLINFNEQGEKKVIDKF 735 >UniRef50_Q029V8 ATP-dependent DNA helicase, Rep family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029V8_SOLUE Length = 788 Score = 802 bits (2073), Expect = 0.0, Method: Composition-based stats. Identities = 283/798 (35%), Positives = 407/798 (51%), Gaps = 90/798 (11%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L LN +QREAV LL+LAGAGSGKTRV+ HRIA +++ + P +++AV Sbjct: 1 MDF---LKGLNAQQREAVTHIDGPLLILAGAGSGKTRVITHRIAHIITSRHVPPSAVLAV 57 Query: 61 TFTNKAAAEMRHRIGQLMG--TSQGGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQI 113 TFTNKAA EMR R+ L+ V TFH RLLR + F I Sbjct: 58 TFTNKAAKEMRERVAALLEDVPLDSMPTVSTFHSFCVRLLRRDGDPLARVRPGFTRRFTI 117 Query: 114 LDSEDQLRLLKRLIKAMNLDEKQW-PPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQ 171 D EDQL+++K + + DEK++ R A+ I+ K+ + P + N + Sbjct: 118 YDDEDQLQIIKAAYRTLGFDEKEFMQYRAALSRISHAKNTKVTPQEMFRDAVNKESEAVA 177 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 +Y+ Y++A A +DF +LLL A L + + R + +++DE+QDTN QY Sbjct: 178 ALYEEYEKALRNANALDFDDLLLEAVRLLRTDDATRESWNRRLSYVMIDEYQDTNRSQYE 237 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 +RLL V +VGD+DQSIY WRGA ++NI F D+P A+TIRLEQNYRST NIL+ Sbjct: 238 LMRLLTEQHQNVCVVGDEDQSIYSWRGADIKNILDFEKDYPRAKTIRLEQNYRSTKNILA 297 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE-C 350 AA A++ENN R GKKLWT+ GE + LY ++ +EA F+ + + + + + Sbjct: 298 AAGAVVENNKARKGKKLWTESDSGELLGLYAGYDSENEALFIADTTEKYLAS--NPGDHV 355 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+N+QSR +EEAL + Y + GG F++R EIKD ++YL+L ++ D + RV Sbjct: 356 AILYRTNSQSRQIEEALRRYGRKYNVVGGFSFYQRAEIKDMVAYLKLASSNVDSVSLMRV 415 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 +NTP RGIG T++ + + RD L LW++ ++ ++ L+ R+ S+L F LI L+ Sbjct: 416 INTPARGIGRTTVEQIERYGRDHGLNLWESIERIIDDQQLSTRSQSSLVVFRNLIQELSL 475 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + L +++ +G R M +QEK + +TR+ENL+EL+ A E Sbjct: 476 VASTSSLPDLIRHILERTGYRKMLQQEKTPESETRLENLDELINAAADAHERGE-----T 530 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 L FL +AAL A D V LMTLH+AKGLEFP VF+ GME G+FP S++ Sbjct: 531 LGDFLDNAALVADVDSYDEQS-PVTLMTLHNAKGLEFPLVFLSGMELGLFPHSRSMNSEE 589 Query: 591 RLEEERRLAYVGVTRAMQKL-----------------------TLTYAETRRLYGKEVYH 627 LEEERRL YVG+TRA +KL L+ ++ Sbjct: 590 ALEEERRLCYVGMTRARKKLVLTWAKMRRRFGGGEQERSTASWFLSEVPENLIFNLGPRD 649 Query: 628 RP--------------------------------SRFIGE--LP------------EECV 641 P S+F GE LP + Sbjct: 650 EPGEVDLYSERYDVRQSARRNTYTGKTYNSLDNISQFFGERGLPFKPGQSAPAPPKPDLR 709 Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 + + + P G + G V H K+G GT+V EG G+ +++ V Sbjct: 710 TPPQYPRPIGSAPMPMKQVPPPPPPRKGARAGMTVEHPKYGTGTVVRREGEGDDAKITVN 769 Query: 702 FQGQGIKWLVAAYARLES 719 F G+K LV YA L+ Sbjct: 770 FPRYGLKKLVEKYAGLKR 787 >UniRef50_D0LJZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJZ3_HALO1 Length = 787 Score = 801 bits (2069), Expect = 0.0, Method: Composition-based stats. Identities = 269/672 (40%), Positives = 381/672 (56%), Gaps = 15/672 (2%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN QR+AV L+VLAGAG+GKTRVLV+RIA ++ P I+AVTFTNKAA Sbjct: 5 AQLNPAQRKAVEHGDGPLMVLAGAGTGKTRVLVNRIAHMVD-RGVPPRDILAVTFTNKAA 63 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ +L+G + MW+GTFH +LLR H L +DF I DS+DQ RLL LI Sbjct: 64 KEMRERLRELLGMAANAMWIGTFHATCVKLLRIHGEHIGLSRDFTIFDSDDQKRLLNALI 123 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 K L E Q + I+ K P + +G + +++Y YQ + G V Sbjct: 124 KEHGL-EDQVSAKTLAVQIDRCKSRDEDP--MDRHGGWGDDLLREIYPLYQAGMAQQGAV 180 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LLL+ EL P + RF ++LVDEFQDTN +Q+ +R A + + +VG Sbjct: 181 DFNDLLLKVLELAR-DPTVGPVLSARFDHVLVDEFQDTNRVQFRLVRHFADVSRNLTVVG 239 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA+ N+ F D+P AE ++LEQNYRSTS IL AANA+I N R K Sbjct: 240 DDDQSIYSWRGAEPRNLLEFKRDYPDAEVVKLEQNYRSTSVILDAANAVIAKNRNRHEKA 299 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEA 366 LWT GE I ++ +EA F+ I+ ++ AILYR+ AQSR LEE Sbjct: 300 LWTASDGGESILWEPCPSDREEATFIARAIRGLVSAENRDFSDMAILYRTRAQSRQLEEQ 359 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + + Y I G + FF+R+E+KD +SYLRL+ N D AFER+VN P RGIG T++ V Sbjct: 360 LRRFDIHYEIIGDVSFFQRREVKDIISYLRLLVQPNADLAFERIVNVPARGIGKTTVERV 419 Query: 427 RQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQ-ETADMPLHVQTDR 483 R +R +L L++A R LA RA + L+ F++++D L A + + Sbjct: 420 RDYARRAELPLFEAARACADGSGGSLAARARNKLRAFLDIVDGLRDVMAAGASVAEIVIQ 479 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ SG +E + + R++NL ELV+ F E ++ L FL++ AL++ Sbjct: 480 TVERSGYSAALTKEGTLEAEERLKNLSELVSWGSSFDEEEGED--ASLVEFLANVALQSS 537 Query: 544 EGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLEEERRLA 599 +A++ V++MT+H+AKGLEFP VF+ G+EEG+FPS D +G LEEE RLA Sbjct: 538 GDKAESGDRGKVKMMTIHAAKGLEFPVVFLCGLEEGLFPSLRERDDQNDGDTLEEEYRLA 597 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA ++L LTYA R ++G+ RPSRF+ +P++C+ + + Sbjct: 598 YVAITRARERLVLTYAMQRMIWGETRSQRPSRFLDSIPDDCLAVRAEPPPPATTTHYDDY 657 Query: 660 GTPMVENDSGYK 671 G+ + Sbjct: 658 GSTLRRRRRPAA 669 Score = 47.4 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 23/46 (50%) Query: 669 GYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 + G V HA FG G ++ G G+ +L + F G+K ++ + Sbjct: 737 EIRAGSLVTHATFGRGRVIEARGRGQTRKLLIDFSEVGLKTVLERF 782 >UniRef50_B3QF13 UvrD/REP helicase n=9 Tax=Rhizobiales RepID=B3QF13_RHOPT Length = 848 Score = 798 bits (2063), Expect = 0.0, Method: Composition-based stats. Identities = 288/712 (40%), Positives = 403/712 (56%), Gaps = 62/712 (8%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L LN +QREAV +LVLAGAG+GKTRVL RIA ++S P I++VTFTNK Sbjct: 34 YLSGLNPEQREAVETLDGPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTFTNK 93 Query: 66 AAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+GQ++G + GM W+GTFH + R+LR H L +F +LD++DQ+RLLK Sbjct: 94 AAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQLTSNFTVLDTDDQIRLLK 153 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ--SYGNPVEQTWQKVYQAYQEACD 182 +L+ A N+D+K+WP R I+ K+ GL P + K+Y YQE Sbjct: 154 QLLAADNIDDKRWPARMLAGLIDGWKNRGLTPSQVPAGEAAMFGNGRGGKLYAQYQERLK 213 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG---- 238 DF +LLL L+ P +L+ Y+ RF ILVDE+QDTN QY W+RLL+ Sbjct: 214 ILNAADFGDLLLENIRLFREHPDVLRSYQNRFKFILVDEYQDTNVAQYMWLRLLSQTPSS 273 Query: 239 -------------------------------------------DTGKVMIVGDDDQSIYG 255 + VGDDDQSIYG Sbjct: 274 SSLPGSTRQSISSQEDGSPGLAASRRPGDDVETSGNVVASTSAPPKNICCVGDDDQSIYG 333 Query: 256 WRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG 315 WRGA+V+NI RF +DFPGA+ IRLE+NYRST +IL+AA+ LI +N GRLGK L T+ DG Sbjct: 334 WRGAEVDNILRFDHDFPGAKVIRLERNYRSTGHILAAASHLIAHNEGRLGKTLRTEDVDG 393 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYR 375 E +++ A++ +EAR + I+ Q G AL E AIL R++ Q R E+ + +PYR Sbjct: 394 EMVTVTGAWDSEEEARAIGEEIEQLQRQGHALNEIAILVRASFQMREFEDRFVTLGLPYR 453 Query: 376 IYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQL 435 + GG RF+ER EI+DAL+YLR+I + DD AFER+VN P RG+GD T+ ++ +R R++ Sbjct: 454 VIGGPRFYERAEIRDALAYLRVINSPADDLAFERIVNVPKRGLGDATVQMLHDHARKRRI 513 Query: 436 TLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYE 495 L++A R ++ L +A S+L+ +E + + + + V+ +SG M++ Sbjct: 514 PLFEAARMVIDTDELKPKARSSLRGLIENFERWQVQRDALAHTELAEIVLDESGYTEMWQ 573 Query: 496 QEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQ 555 +++ R+ENL+ELV + +F LQ FL H +L + +DAV Sbjct: 574 KDRSADAAGRLENLKELVRSMEEFE---------NLQGFLEHISLVMDR-EGGADEDAVS 623 Query: 556 LMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTRAMQKLTLT 613 +MTLHSAKGLEF VF+ G EEG+FP Q +LDE GR LEEERRLA+VG+TRA ++ L Sbjct: 624 VMTLHSAKGLEFETVFLPGWEEGLFPHQRALDEQGRAGLEEERRLAHVGITRARKRAKLY 683 Query: 614 YAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVE 665 +A RR++G PSRF+ ELP VE + + Sbjct: 684 FATNRRIHGTWNTTIPSRFLDELPAANVEITESKGGSGWGGMSGYGPSRFDN 735 >UniRef50_C7M335 UvrD/REP helicase n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M335_ACIFD Length = 715 Score = 796 bits (2058), Expect = 0.0, Method: Composition-based stats. Identities = 276/724 (38%), Positives = 402/724 (55%), Gaps = 18/724 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL+ LN QREAV+AP +LVLAGAGSGKTRVL R+AWL++ P SI+A+TF Sbjct: 2 LEELLEDLNPSQREAVSAPIGPVLVLAGAGSGKTRVLTRRVAWLLAA-GERPSSILAITF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM R+ L+G + G+WV TFH R+LR H L + I D +D RL Sbjct: 61 TNKAAGEMAERVRSLVGPNADGLWVSTFHAACARMLRLHPELGGLRSGWSIYDQDDARRL 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAYQEAC 181 L+R I+ ++LD K++PPR ++ K + P E+ VY++YQ A Sbjct: 121 LERTIRRLDLDTKRFPPRAIAQQVSLAKARLVDPERFTDEAEGLYERQVAMVYRSYQAAL 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 A DF +L+ E +P + +H+R RF ++L+DE+QD N Q+A++ L G +G Sbjct: 181 AEANAADFDDLIGLVVEGLATRPELAEHWRRRFRHVLIDEYQDANPAQHAFVAELVGRSG 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 V VGD DQSIY +RGA + F F GA+ + LEQNYRST+ IL ANA+I N Sbjct: 241 SVFAVGDVDQSIYAFRGADPSGVLTFEERFDGAKVVTLEQNYRSTNAILGLANAVIAKNR 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNAQS 360 R K L+++ +G P Y A +E DEAR+V ++ Q G +E A+++R+NAQS Sbjct: 301 RRYAKHLFSELGEGTPARRYQATDERDEARWVAATVREFLQRGGVDPSEIAVIFRTNAQS 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R LEEA +A +P+R+ GG+RF+ER+E++D L+YLR++AN +DD A R++N P RGIG Sbjct: 361 RPLEEAFSEAGIPFRVVGGVRFYERREVRDLLAYLRVLANPDDDVALARILNVPRRGIGR 420 Query: 421 RTLDVVRQTSRDRQLTLWQACR-ELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T + ++ + R ++ R E ++ L R AL+ F+ELID L + Sbjct: 421 GTEEALQAAAALRGRSMLSLLRAEGVEVLGLTSRQERALRGFVELIDRLGALASLHRPSE 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 D V+ ++ +E + R+EN+ EL + + L++FL AA Sbjct: 481 LIDAVVAETSYLEHLNEEDPITLEGRLENIAELRASAAE---------ADDLESFLERAA 531 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + + V L+T H+AKGLEF V +VG+EEG+FP ++ + +EEERRL Sbjct: 532 LVSAVDEVMGAS-GVTLLTAHAAKGLEFDVVVVVGLEEGVFPHVRAIVDAEAVEEERRLF 590 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 YV +TRA L LT A R +G+ +Y+ PSRF+ ELP + V V + Sbjct: 591 YVAMTRARTTLVLTSARRRASWGEPLYNPPSRFLDELPADLVATTAAPVAVGTACAESIQ 650 Query: 660 GT----PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 S + +G RV HA++GEGTI + G L +AF G G + A+ Sbjct: 651 RASAVVEARAARSEWVVGDRVFHARYGEGTIRRVVPRGVDDELVIAFHGAGERRFFASMV 710 Query: 716 RLES 719 +L Sbjct: 711 KLRR 714 >UniRef50_A9BDV1 UvrD/REP helicase n=44 Tax=Cyanobacteria RepID=A9BDV1_PROM4 Length = 809 Score = 791 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 279/804 (34%), Positives = 411/804 (51%), Gaps = 90/804 (11%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + LD LN++Q AV LLV+AGAGSGKTR L HRIA L++ P I+AVTFT Sbjct: 6 NSFLDGLNNEQSNAVNHFEGPLLVVAGAGSGKTRALTHRIAHLITEYKVDPSEILAVTFT 65 Query: 64 NKAAAEMRHRIGQLMGTSQ-----------------------------GGMWVGTFHGLA 94 NKAA EM+ R+ L+ +W+GTFH L Sbjct: 66 NKAAREMKERLELLLAKRIAKYQLDQPWSSVSLVEQNQFRTRIYREVTKDLWIGTFHALF 125 Query: 95 HRLLRAHHMD------ANLPQDFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYIN 147 +LLR + F I D D L+K +I + MNLD K++ P++ W I+ Sbjct: 126 SKLLRFDIEKFVDKEGLKWTKYFSIYDETDAQSLIKEIIIQDMNLDPKRFEPKKVRWAIS 185 Query: 148 SQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHI 206 + K++G+ P + +VY Y++A +DF +LLL +L + Sbjct: 186 NAKNQGILPDQFTQSAEGQRGKLIAQVYSLYRKALAANNALDFDDLLLLPVQLLKQNEQV 245 Query: 207 LQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT-----------GKVMIVGDDDQSIYG 255 ++ RF ++LVDE+QDTN QY I+LL + V +VGD DQSIY Sbjct: 246 RSYWHNRFKHLLVDEYQDTNWTQYELIKLLVTNGINPSFFSSWSKRSVFVVGDADQSIYS 305 Query: 256 WRGAQVENIQRFLNDFPG-------AETIRLEQNYRSTSNILSAANALIENNNGRLGKKL 308 +R A + F DF + ++LE+NYRSTS IL AAN+LI NN RL K L Sbjct: 306 FRAADFRILMGFQEDFKNKNSLQGLSNVVKLEENYRSTSTILDAANSLISNNKERLDKVL 365 Query: 309 WTDGADGEPISLYCAFNELDEARFVVNRIK--TWQDNGGALAECAILYRSNAQSRVLEEA 366 +GE I L +E+ EA VV+R++ + + AILYR+NAQSRV+EE+ Sbjct: 366 KATRGEGELIKLTRCDDEISEAEAVVHRLRLLEAHNKDLKWGDIAILYRTNAQSRVIEES 425 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L++ ++PY + GG+RF++R+E+KD L+YLRL+ N +D + R++N P RGIG T+ Sbjct: 426 LVRWNIPYIVVGGLRFYDRREVKDILAYLRLLINPSDSVSLLRILNVPKRGIGKTTVQRF 485 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 S + LW+ + ++L GR+A L +F ELID L + V++ Sbjct: 486 SDASSQLGIPLWEVVSDPEAIRSLGGRSAKGLLKFKELIDDLRLSLNNTEPSQLIQLVME 545 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 SG + ++ + R NL+ELV A+ Q+ +E+ + L+ FL+ AAL + + Sbjct: 546 KSGYISELIATATDEAEERRRNLQELVNASLQY---QEENEAADLEGFLATAALASDADK 602 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRA 606 DT D + LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TRA Sbjct: 603 KDTAHDRITLMTLHSSKGLEFPIVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGLTRA 662 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSR-FIGELPEECVEEVRLRATVSR------------- 652 ++L L +A RR++G S F+ E+P E +E A + Sbjct: 663 KERLFLFHATERRIWGGMREPAVSSIFLSEIPSELIEGDIQLAGGAALRRERRMDRLTRV 722 Query: 653 ----------------PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 P + R +++G +V H+ FGEG + ++ GSGE Sbjct: 723 DRREDQLNSSGISKNLPTNAVRRKYSGPAPGVSWEVGNKVLHSAFGEGEVTHIFGSGEKI 782 Query: 697 RLQVAFQGQGIKWLVAAYARLESV 720 + + F G G K L A ++ + Sbjct: 783 SIAIKFVGMGPKILDPRLAPIQPI 806 >UniRef50_A8SMG4 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SMG4_9FIRM Length = 750 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 257/748 (34%), Positives = 386/748 (51%), Gaps = 46/748 (6%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LL LN+KQ EAV S LLVLAGAGSGKT+VL +IA+ + +N S Y I+A+TFTN Sbjct: 2 DLLKGLNNKQLEAVEHFGSPLLVLAGAGSGKTKVLTTKIAYAVLEKNVSEYEILAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KA EM+ RI + MW+GTFH + ++LR + +F I D +DQ +LK Sbjct: 62 KAGKEMKERIENIFKRDISSMWIGTFHSICSKILRFNIEKIGYSNNFTIYDRDDQKLVLK 121 Query: 125 RLIKAMNLDEKQWP---PRQAMWYINSQKDEGLRPHHIQSYGNPVE--QTWQKVYQAYQE 179 + K NL + + I+ K + ++ Y + +K+Y+ Y+E Sbjct: 122 EIFKQ-NLTWESVLGEFKNAIIGIISDAKGKNVKSSEFSKYFSFGNNTDVVEKIYKKYEE 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + +DF +L+ + EL+ P +L +Y E+F I VDE+QDTN+ QY I+LLA Sbjct: 181 ILIKNNALDFDDLIFKTIELFKKCPEVLDYYSEKFKYIYVDEYQDTNDAQYEIIKLLASK 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V VGD DQSIYGWRGA + NI F NDFP ++ I LE+NYRST IL AN LI+N Sbjct: 241 YKNVCAVGDIDQSIYGWRGANISNILNFENDFPNSKIILLEENYRSTQKILDCANELIKN 300 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R K LWT G+ I NE EA V + G L++ A+LYR+N Q Sbjct: 301 NVNRKEKNLWTKKEGGDEIIYKSYQNENYEAIEVAQNVSNLIFEGYNLSDIAVLYRANFQ 360 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 S +E AL + S+ YR+ GG++F++R+EIKD L+YL+LIAN DD AF R++N P R IG Sbjct: 361 SFAIENALRKNSIAYRMVGGLKFYDRKEIKDILAYLKLIANPKDDNAFRRIINYPKRSIG 420 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + +L + + ++L+ +++ + + + F ++I D + + Sbjct: 421 NVSLQKLEEYCYSENISLFDGLFRNEFLDSVSKKLRTEFENFRDMIFGFITCVEDTEVEI 480 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++ + + ++ + + EN+ + + L +L + Sbjct: 481 LIKELLDSIKFVDYLRENEKKEFEKKAENINLFLEEISN------SYKGIKLLEYLETNS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRL 598 L + + + D V L T+HSAKGLE+ VFI+GM+EG+FPS+ S+ E LEEERRL Sbjct: 535 LLSDIDKTEDSDDTVTLTTIHSAKGLEYKVVFIIGMDEGIFPSERSIKERDDGLEEERRL 594 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL---------------PEECVEE 643 YV +TRA +KL ++ ++ +YGK +R S F+ E+ EE V Sbjct: 595 FYVAITRAKEKLFISSTKSMTMYGKLNLYRVSSFVDEIINYVDDKSINLEFNFDEERVTT 654 Query: 644 VRLRATVSRPVSHQRMGT------------------PMVENDSGYKLGQRVRHAKFGEGT 685 ++R S + + YK+G+++ H K+GEGT Sbjct: 655 SKIRNDAYTDYSRTYVPNADLGRTKLDKPLNHYQKPNKTSSKDVYKVGEKIIHEKYGEGT 714 Query: 686 IVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 ++ E +G L VAF G+GIK Sbjct: 715 VIKCEKAGTKVMLMVAFDGEGIKLFDIK 742 >UniRef50_B2V7G3 UvrD/REP helicase n=5 Tax=Aquificales RepID=B2V7G3_SULSY Length = 706 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 251/724 (34%), Positives = 396/724 (54%), Gaps = 28/724 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M +L LN++Q+EAV S LLVLAGAGSGKT+V+ H+I +L+ I+A+ Sbjct: 1 MLNDPILSGLNERQKEAVLHFDSPLLVLAGAGSGKTKVITHKIMYLVKHYGIPLNRILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI + +G WV TFH A + LR + ++F I D ED Sbjct: 61 TFTNKAAEEMKERIEKAIGEKPQ--WVMTFHSFAAKFLRMEAENIGYDRNFVIYDEEDSK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 +L+K+++K +NL+E+++ P + S+ + P + + V++ Y+E Sbjct: 119 KLIKKVLKDLNLNEEKFKPDKIKDI-ISKIKQDDNPEDQLEIYSISNSYIKTVFEKYEEE 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + DF +LL++ ++ N P +L+ +R +F ILVDE+QDTN IQ+ ++LL GD Sbjct: 178 LKNSNAFDFDDLLIKTVKILSNHPEVLERWRNKFDYILVDEYQDTNRIQHKLLKLLVGDK 237 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGD Q IY WRGA ENI F DFPG + ++LE+NYRST IL ANA+I + Sbjct: 238 HTITVVGDPAQCIYTWRGAHPENILDFEKDFPGTKIVKLERNYRSTKKILDCANAVISKS 297 Query: 301 NGRLG---KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 G+ LWTD +GE I L NE +EARF+ N+IK +G + + A+L R Sbjct: 298 KGKWKGKVLTLWTDKEEGEDIFLVPLENEKEEARFIANKIKQLAQDG-SYGDFAVLVRMT 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 +R +EEA + +PY++ GG++FFER E+KD L+YL+L N D A+FER + P RG Sbjct: 357 FLTRNIEEAFISNGIPYQVIGGLKFFERAEVKDILAYLKLAVNPKDYASFERSLTVPPRG 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 +GD+ L+ ++ + QA ++ + LQ ++EL++ + + Sbjct: 417 VGDKGLEYIKSNFK---TDWIQALKDSYER--FNKSVKIKLQEYLELMEYVLENAKF-SP 470 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 +++ G + ++E + + R+EN+ EL+ A + + L F Sbjct: 471 SKTAKEIVERIGYQEYLQKEYEKDWEDRVENINELIIALEEAEK-----EGKTLDQFFEE 525 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 +AL + D Q+ ++MT+H AKGLEF VF+ G+EEG+FPS + D+ +LEEERR Sbjct: 526 SALMQAQDTID-NQNKAKIMTVHGAKGLEFDTVFVAGLEEGIFPSGRAFDDPTQLEEERR 584 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEEC----VEEVRLRATVSR 652 L YV +TRA KL LTYA+ R+ YG K V + S+FI ++ E ++ + + Sbjct: 585 LFYVAITRAKNKLYLTYAKERKSYGNKSVPTKRSQFIDDIKEHIKLPVKQKTQPNVSNRH 644 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 ++ + + DS ++G V+H FG+G + + G V F+ G K + Sbjct: 645 NLTIKSQSKSYFDFDSDIRVGMLVKHDVFGKGVVKKIVGKN----ATVLFEKVGEKTISV 700 Query: 713 AYAR 716 + + Sbjct: 701 DFLK 704 >UniRef50_A5GQG6 UvrD/REP helicase n=18 Tax=Cyanobacteria RepID=A5GQG6_SYNR3 Length = 784 Score = 791 bits (2044), Expect = 0.0, Method: Composition-based stats. Identities = 285/785 (36%), Positives = 404/785 (51%), Gaps = 73/785 (9%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LND QR AV LLV+AGAGSGKTR L HRIA L+ P I+AVTFTN Sbjct: 2 SFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFTN 61 Query: 65 KAAAEMRHR----------------------------IGQLMGTSQ-GGMWVGTFHGLAH 95 KAA EM+ R + + +W+GTFH L Sbjct: 62 KAAREMKERLQLLLAQKLAQSQFGQPWGTLPAVEQRQLRSRIEREVIKELWIGTFHALFS 121 Query: 96 RLLRAHHMD------ANLPQDFQILDSEDQLRLLKRLI-KAMNLDEKQWPPRQAMWYINS 148 RLLR + F I D D L+K ++ + + LD K+ P++ W I++ Sbjct: 122 RLLRFDIDKFKDPEGLCWTKQFSIYDEADAQSLVKEIVTQELQLDPKRVEPKKIRWAISN 181 Query: 149 QKDEGLRPHHIQSYGNPVEQTW-QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHIL 207 K++G P +++ VY+ Y++A +DF +LLL +L + Sbjct: 182 AKNQGWLPDQLEANSEGQRGKLTADVYRRYRKALAANNALDFDDLLLLPVQLLQQNEQVR 241 Query: 208 QHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT-----------GKVMIVGDDDQSIYGW 256 ++ RF ++LVDE+QDTN QY I+LL V +VGD DQSIY + Sbjct: 242 SYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTGGQDPQLYNEWNGRSVFVVGDADQSIYSF 301 Query: 257 RGAQVENIQRFLNDF-----PGAET--IRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 R A + F DF A ++LE+NYRST+ IL AANALI NN+ R+ K L Sbjct: 302 RAADFTILMGFQQDFGDQAADDATRTMVKLEENYRSTATILEAANALIANNSERIDKVLR 361 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRSNAQSRVLEEAL 367 +GE ISL +E+ EA VV+R++ + A+LYR+NAQSR +EE+L Sbjct: 362 PTRGEGELISLTRCDDEIAEAEAVVHRMRMLDAAHPELSWGSMAVLYRTNAQSRAIEESL 421 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 ++ +PY + GG+RF++R+EIKD L+YLRL+ N D + RV+N P RGIG T+ + Sbjct: 422 VRWRIPYVVVGGLRFYDRREIKDVLAYLRLLINPADSVSLLRVINVPRRGIGKTTIQRLN 481 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 + + LW + ++L GR+A L +F ELI+ L ++ P +V++ Sbjct: 482 DAANQLAIPLWDVVSDGEAVRSLGGRSAKGLLQFCELINGLREQAQVAPPSELIQQVLEK 541 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA 547 SG E ++ + R NL+ELV A Q+ E+ D L+ FL+ AAL + Sbjct: 542 SGYLRELITEATDEAEERRRNLQELVNAALQYQEENEEGD---LEGFLASAALASDADSK 598 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAM 607 DT D V LMTLHS+KGLEFP V +VG+E+G+FPS SLD+ LEEERRL YVG+TRA Sbjct: 599 DTAADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAK 658 Query: 608 QKLTLTYAETRRLYGK-EVYHRPSRFIGELPEECVE------------EVRLRATVSRPV 654 ++L L++A RRL+G PS F+ ELPE V+ + ++R Sbjct: 659 ERLFLSHASERRLWGGMREPAVPSIFLAELPEALVQGDIPRSGGAALRREQRLERLTRVD 718 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 + V + +G++V HA FGEG + + GSGE + V F G G K L Sbjct: 719 RAEAQPKARVSAARSWSVGEKVIHANFGEGEVTHTFGSGEKISIAVKFIGMGSKILDPRL 778 Query: 715 ARLES 719 A +E Sbjct: 779 APIEP 783 >UniRef50_A5TXQ2 Superfamily I ATP-dependent helicase n=15 Tax=Fusobacterium RepID=A5TXQ2_FUSNP Length = 737 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 245/744 (32%), Positives = 399/744 (53%), Gaps = 44/744 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ LL+ LNDKQREA + ++L+LAGAGSGKTR + +RIA ++ SPYSI+AV Sbjct: 1 MNL-NLLEKLNDKQREAASQIDGSILILAGAGSGKTRTITYRIAHMIENVGISPYSILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R+ L+G + TFH RLLR + + +F I D++DQ Sbjct: 60 TFTNKAAKEMRERVEGLVGDIAKACTISTFHSFGMRLLRMYASEVGYNPNFTIYDTDDQK 119 Query: 121 RLLKRLIKAMNL--DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 R++K ++K N+ + + R + I+ K+E P + + + +VY Y Sbjct: 120 RIVKAILKGQNISFNGVKLTERDIVSIISKIKEEIKTPDEY----SVINKQIIEVYDKYN 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 +A + +DF+++LL ++L P IL+ + ++ I++DE+QDTNN+QY I L+A Sbjct: 176 KALLESNAMDFSDILLNTYKLLQK-PEILEKVQNKYKYIMIDEYQDTNNLQYKIIDLIAR 234 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + + +VGD++QSIYG+RGA + NI F N++ A+ ++LE+NYRST+ IL AAN LI+ Sbjct: 235 KSSNLCVVGDENQSIYGFRGANILNILNFENNYNNAKIVKLEENYRSTTTILDAANELIK 294 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN KKLWT G+ I + N DE ++ I+ NG + ILYR+NA Sbjct: 295 NNKSSKDKKLWTQNGKGDLIKVLACDNGRDEVSRIIEFIRENHQNGVPYRDMTILYRTNA 354 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR+ EE LL+ ++P++++GG+ F+ R EIKD ++YL +I N D+ +R++N P R + Sbjct: 355 QSRIFEEGLLRYNIPHKVFGGISFYSRAEIKDIIAYLSIIVNPQDELNLQRIINVPKRKV 414 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++ ++ + +R+ L L +A + + L L ++I L Sbjct: 415 GEKGIEKIIAYARENDLNLLEALSHIKEISGLTAVGKEKLLEMYDIIKELKDLAYTETAS 474 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +I + + + RIEN++E + + + + L +L + Sbjct: 475 YIVQTLIDKIHYIDYINENY-DDAEARIENIDEFKNSILELENVVGE---LRLNEYLENV 530 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + D V+LMT+H++KGLEFP VF+VG E +FP ++ + +EEERRL Sbjct: 531 SLISATDDLEEKSDYVKLMTIHNSKGLEFPIVFLVGFENEIFPGTRAMLDEKEMEEERRL 590 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---------------- 642 YV +TRA +KL L++A R +YG++ PS F+ E+PE+ ++ Sbjct: 591 CYVALTRAEKKLYLSHATIRFVYGQDRLSTPSVFLKEIPEKLLDIEVKKERLYFADDYSD 650 Query: 643 -----------EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 E + ++ T V ++ G+K+G +VRH KFG G I +++ Sbjct: 651 EINTYGNNKKFEKKKTEINTKNTIKLDENTKKVIDNLGFKVGDKVRHKKFGLGVIKSIDA 710 Query: 692 SGEHSRLQVAFQGQGIKWLVAAYA 715 + + G K + A Sbjct: 711 KKIYVQYV-----DGTKEMALILA 729 >UniRef50_B7C8B0 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8B0_9FIRM Length = 725 Score = 791 bits (2043), Expect = 0.0, Method: Composition-based stats. Identities = 257/738 (34%), Positives = 397/738 (53%), Gaps = 33/738 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + +LD+LN+ QR A ++ ++AGAGSGKTRVL+ RI +L+ P I+A+ Sbjct: 1 MS-NSILDTLNENQRTAATTINEHVRIIAGAGSGKTRVLMARIVYLVQDCGILPNRILAI 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ +G+ + + T H L R+LR P+ F I+D EDQ Sbjct: 60 TFTNKAANEMKTRLTAQLGSMTSVVRISTIHSLCVRMLREDADLIGYPKTFAIMDPEDQK 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQE 179 +LK + K + +D+ +A+ I++ K + P + + V T K+Y Y+ Sbjct: 120 AILKPIYKTLEVDKTTISYNRALGAISAYKTNYIDPQMAANMAMDDVSITLAKIYAGYEA 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + +DF +LLL H L + + + ++ R I VDEFQD + IQY I+LL G Sbjct: 180 RRNEMKAMDFDDLLLEGHRLLNSVSSVKEKWQNRLDYIHVDEFQDVDPIQYGIIKLLTGK 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGD DQ+IY WRGA V+ I +F DF +T+ L +NYRST IL A+NA+I+ Sbjct: 240 NTHLCVVGDPDQTIYTWRGASVDIILKFNKDFEPCKTVILNENYRSTQPILDASNAVIKY 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R+ K L+T E I+++ + +E FV +I G + AILYRSN Sbjct: 300 NKERIDKDLYTKLPGDEKITMFEGKEDSEEPIFVARQINEKHKKGLEYKDMAILYRSNYS 359 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND--------DAAFERVV 411 SR E +PY IYGG+RF+ERQEIKDAL YLRL NRN+ D A RV+ Sbjct: 360 SRAFERIFKSVGIPYVIYGGIRFYERQEIKDALCYLRLCTNRNEEDPDQMALDLAVLRVI 419 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 N P RGIG RT++ +++ + +R + L+ ++ + L+ + F++LI+ L + Sbjct: 420 NVPRRGIGARTIENLQKQAAERHMNLYDVMKDPI---GLSTAVTKKCEMFVDLIEDLREN 476 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 L D V+ +G +M ++++ E GQ RI+NL+EL + + ++ M L Sbjct: 477 REHYALEDFLDYVLDTTGYISMLKEDR-ESGQDRIDNLKELK---EDIAQSMIEDPEMTL 532 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG- 590 +++L AL + Q +T ++ V LMT+H+AKGLEF VF+V +G+FPS + DEGG Sbjct: 533 ESYLQDIALFTDKTQ-ETSENTVSLMTVHAAKGLEFDTVFLVNFNDGVFPSSRACDEGGM 591 Query: 591 -RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 LEEERRL YV +TRA + L +T+ Y ++ + PSRF E+P E + + Sbjct: 592 KALEEERRLLYVAMTRAKKTLYITWNTG-FSYMQDAFKTPSRFRAEIPMEYIVQEEKEEA 650 Query: 650 VSRPVS-------HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 +P + + + + G V H +G+G ++ + G +AF Sbjct: 651 PKQPKAVVSQSLTGRPSKLGANKKKVRLRKGDAVEHTIYGQGVVLEIRGD----VATIAF 706 Query: 703 Q-GQGIKWLVAAYARLES 719 G+K L AA+ ++ Sbjct: 707 GHTIGVKKLNAAHPSIKK 724 >UniRef50_C3RQ43 ATP-dependent DNA helicase n=4 Tax=Bacteria RepID=C3RQ43_9MOLU Length = 714 Score = 790 bits (2041), Expect = 0.0, Method: Composition-based stats. Identities = 254/730 (34%), Positives = 407/730 (55%), Gaps = 28/730 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M++ L LN Q+EA S+L ++AGAGSGKTRV+ +RIA+L+ P I+A+ Sbjct: 1 MELDEL---LNKNQKEAATYLDSHLRIIAGAGSGKTRVVTYRIAYLIDEIGVDPRKILAI 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI L+G G V T H L R+LR H N P +F I+D EDQ Sbjct: 58 TFTNKAANEMKERITSLLGPHALGSLVCTIHSLCVRILRRHINVINYPSNFMIMDEEDQK 117 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW--QKVYQAYQ 178 L+K++ +++D K + + I++ K + P + KVY+ Y Sbjct: 118 ALIKKIYNNLDIDAKTISIKSMIASISNYKMANIDPERAMELAGQFQGEIKKAKVYKEYL 177 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E + ++DF +LLL+A ++ N P +L+ ++ +F I VDEFQD NI+Y ++L++ Sbjct: 178 EYQENHFMLDFDDLLLKAVYIFENYPDVLEKWQHKFQYIHVDEFQDVGNIEYRLVKLMSQ 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D +VGD DQ+IY +RGA V I F DF +T+ L+QNYRST NIL+ +N+LI Sbjct: 238 D-AITCVVGDPDQTIYSFRGANVNYILDFDKDFKPCKTVILDQNYRSTGNILNISNSLIR 296 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN--GGALAECAILYRS 356 N RL K L+T+ G + Y +E +EA ++ ++I+ G + AILYR+ Sbjct: 297 KNRNRLEKDLYTEATGGSEVIHYMGKSEQEEADYICSQIEKIISEVDGVNYRDFAILYRA 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N SR +E++++ + YRI+GG++FF R+E+KDALSYL+L+ N D AFER++N P R Sbjct: 357 NYLSRTIEQSMISHGIDYRIFGGLKFFSRKEVKDALSYLQLVCNDED-LAFERIINVPAR 415 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG +TL+ ++ + + Q++L++A + L+ +A + ++ ++ Q + +P Sbjct: 416 GIGKKTLENIQLVALNNQVSLYEALTLFSDQIKLSSKAKKEIITLVKAVETAKQSS--LP 473 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 LH + ++ D G M +++ + RI+N+ EL + + + ++ D+ ++ +L Sbjct: 474 LHEMFENLMNDVGYIDMLKKDLED---NRIDNIHELQRSI--YEFQNQNPDIATIENYLQ 528 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEE 595 +L D Q V LM++H AKGLEF VF++G+ EG+FPS +L E LEEE Sbjct: 529 EISLYTDNDNLDDGQ-YVSLMSIHMAKGLEFDYVFVLGLSEGIFPSFRALSESDEGLEEE 587 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE----VRLRATVS 651 RRLAYV TRA ++L LT +E + + SRFI E+ E ++ R + Sbjct: 588 RRLAYVAFTRARKQLFLTDSEG-FSFVTDSPKISSRFIDEIGSEGIKHVGTKPRFKTANF 646 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 + + + + G V H FG+G +V + G+ L +AF+ G+K L Sbjct: 647 INTAPTKEELVGNNEVTDWSNGDFVLHDTFGKGVVVKVNGN----TLDIAFELPAGLKTL 702 Query: 711 VAAYARLESV 720 +A + L+ + Sbjct: 703 MANHKALKKL 712 >UniRef50_C7NAU4 UvrD/REP helicase n=5 Tax=Fusobacteriaceae RepID=C7NAU4_LEPBD Length = 735 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 264/749 (35%), Positives = 416/749 (55%), Gaps = 46/749 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S +LD LN++QR+A +L+LAGAGSGKTR + +RIA ++ SP +I+A+TF Sbjct: 1 MSSILDELNEEQRKAAEKIEGPVLILAGAGSGKTRTVTYRIAHMVKEIGISPLNILALTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R L+G + V TFH + RLL+ + ++F I D +DQ + Sbjct: 61 TNKAAREMKERAAALIGHEANNLVVSTFHSFSVRLLKTYSERIGYGRNFNIYDVDDQKSI 120 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN---PVEQTWQKVYQAYQ 178 + ++ K M + D P + I+ K++G+ ++ + P + + ++YQ Y Sbjct: 121 ITKIKKEMGIKDNDNVQPGKLANRISKLKEQGIGIKELEREIDMRIPANRLFGEIYQKYD 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 E +DF++LLL A +L + +L+ +ER+ I+VDE+QDTN+IQY I ++A Sbjct: 181 EVLKANNAMDFSDLLLNARKLL-DDTFVLERIQERYKYIVVDEYQDTNDIQYEMINMIAA 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD+DQSIY +RGA + NI F D+ A T++LE+NYRST IL AN LI+ Sbjct: 240 KYRNICVVGDEDQSIYAFRGANINNILNFERDYKEAFTVKLERNYRSTKKILDTANELIK 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN GK LWTDG+DGE I +Y A DEA F+V +K + +G + ILYR+NA Sbjct: 300 NNKSSKGKTLWTDGSDGEKIKIYNAMTVYDEADFIVTEMKKKKRDGADYKDMTILYRTNA 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSRVLEE LL A++PY+IYGGM+FF+R+EIKD L+YL L+ N+ND+ F R++N P R + Sbjct: 360 QSRVLEEKLLSANIPYKIYGGMQFFQRKEIKDILAYLSLLNNKNDNHNFYRIINVPKRSV 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TL+ +++ + ++ +++ +A + + + AL+ F L+ + +M + Sbjct: 420 GEKTLEKIQEVANEKNISMLEALHYIDEIP-VRAATKLALKEFYNLMQGIYSSLEEMSIK 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 D ++ + E K + R++N+EEL+ + + + M L +L Sbjct: 479 EIFDEILIRTRYIDSIEDNKED----RVKNIEELLNSIIELEKQNPN---MSLNEYLDMI 531 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 +L + + + ++ V+LMT+HS+KGLEF VF+ GME+G+FPS LEEERRL Sbjct: 532 SLSSSTDEMEDDENYVKLMTIHSSKGLEFDYVFLAGMEDGLFPSISFDSPEEELEEERRL 591 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVY-HRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 YV +TRA ++L ++Y+ +R+++GK+ RPSRFI E+ ++ +E V + + S Sbjct: 592 CYVAITRAKKELFISYSSSRKIWGKDDNLRRPSRFIYEMKQDNLEYVGGKYASLKGQSSA 651 Query: 658 RM-------------------------GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGS 692 +S YK+G V H KFG G I ++ Sbjct: 652 PRSFTPKIENFNPFSKDKLGTFGKKSGSQTTSNVNSKYKVGDVVNHKKFGRGKIKKVDMK 711 Query: 693 GEHSRLQVAFQGQGIKWLVAAYAR--LES 719 V G K + A LE Sbjct: 712 SMIVEFMV-----GEKKIALVLADKILEK 735 >UniRef50_B2KB12 UvrD/REP helicase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KB12_ELUMP Length = 786 Score = 789 bits (2038), Expect = 0.0, Method: Composition-based stats. Identities = 264/798 (33%), Positives = 394/798 (49%), Gaps = 90/798 (11%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVH---------RIAWLMSVEN 51 M + YLL SLN Q+EAV L++AGA RIA L+ Sbjct: 1 MSIDYLLQSLNPMQQEAVLHQNGPCLIIAGA---------GTGKTKTLTTRIAALIEN-G 50 Query: 52 CSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDF 111 +P I+AVTFTNKAAA+MR R+ L G +W+ TFH RLLR + L +DF Sbjct: 51 VNPNRILAVTFTNKAAAQMRERVEALAPGQSGRVWIHTFHSFGVRLLRQNAHLLKLTKDF 110 Query: 112 QILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ----SYGNPVE 167 I D +Q +++ +++ M + + Q + I+ KD+ + P + + Sbjct: 111 AIYDESEQKKIITLVLQEMGQKDAKKEINQYISLISRAKDDMIDPESFAISALASNIDFK 170 Query: 168 QTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNN 227 +VY+ YQ + AG +DF +LL++ EL N + ++Y+ F +ILVDE+QDTN+ Sbjct: 171 IRAAEVYKRYQNKLNAAGALDFGDLLVKTAELLKNNEDVREYYQNIFQHILVDEYQDTNH 230 Query: 228 IQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 QY R LA + +VGD DQSIY WRGA + NI F DFP A+ I LEQNYRST Sbjct: 231 TQYIITRTLAYKHRNLCVVGDPDQSIYSWRGANIRNILEFEKDFPDAKIITLEQNYRSTQ 290 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGAL 347 IL ++N LI+ N R K L+++ GEPI + E +EAR+ I ++G +L Sbjct: 291 IILDSSNKLIKKNKKRKDKSLYSNKTSGEPIEVRELLTEGEEARWTAQNIANLIEDGASL 350 Query: 348 AECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 + A+ YR+NAQSR E+ + +PYR+ G +RF++R+EIKD L Y R++ N D + Sbjct: 351 NDIAVFYRTNAQSRNFEDNFRKYQLPYRLIGAVRFYDRREIKDILGYARVLVNPLDTVSL 410 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDA 467 R++NTP RGIG + + + ++L+QA + + L A A Q F+ L+D Sbjct: 411 LRILNTPKRGIGKTAEEKFLEYANLHNISLYQALQRSAFVEGLTPTARRAAQEFINLMDT 470 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYN-EE 524 L E ++++ SG E E K + R++NL+ELV A +++ Sbjct: 471 LRLELKVTSPTDIVNKILTLSGYWKAVEDEVEKDLEAGARLDNLQELVNAVKEYEERMAR 530 Query: 525 DEDLMPLQAFLSHAALEAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQ 583 E L F+ +L G + D+ AV LMT+H AKGLEFP VF+ G+EEG+FP Sbjct: 531 TEREASLSDFVQEISLITGADEKQDSSAGAVTLMTVHLAKGLEFPVVFVSGLEEGLFPL- 589 Query: 584 MSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK-------------------- 623 S + LEEERRL YV +TRA +L +TY TRR++GK Sbjct: 590 -SSKDDDDLEEERRLCYVAMTRAKDRLFMTYTSTRRIFGKMYTNLPSRFLFESGLITEEQ 648 Query: 624 --------------------------EVYHRPS--RFIG-------------ELPEECVE 642 E +RPS F E+ E+ + Sbjct: 649 EGPLNRQSTVMPNYGGYKTKYGSKYGETQNRPSFKPFFAAPKKQKKYDEHGYEIEEQEGD 708 Query: 643 EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF 702 ++ + + + G + GQRVRH FG+G ++ + GSGE +++ V F Sbjct: 709 YGAPIGCAPLGIAGENEAPAVHVSAQGPRTGQRVRHGVFGDGKVIVIAGSGEAAKITVMF 768 Query: 703 QGQGIKWLVAAYARLESV 720 + + YA L+ + Sbjct: 769 ANGVKRTFMLKYAPLQLL 786 >UniRef50_Q4FPM1 DNA helicase II n=5 Tax=Bacteria RepID=Q4FPM1_PELUB Length = 678 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 259/686 (37%), Positives = 389/686 (56%), Gaps = 17/686 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S L++LN+ Q+EAV LL++AGAGSGKT+VL RIA +++ + P I++V Sbjct: 1 MINSEYLNNLNNAQKEAVLYLDGPLLIVAGAGSGKTKVLTSRIAHIINEKKAFPNQILSV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGM-WVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EM++R+ ++ + G+ W+GTFH + +LLR H A L +F I+D++DQ Sbjct: 61 TFTNKAAKEMQNRVSSILNSEAIGLSWLGTFHSICAKLLRKHAPAAGLTSNFTIIDTDDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQ 178 +RL+K + KA N+D KQ P+ + I+ K++G P + + + E+T + +Y+ YQ Sbjct: 121 VRLIKNICKAENIDIKQLAPKFILSIIDRWKNKGFHPDEVVINKNDIFERTIRPLYKIYQ 180 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + DF +L+L ++ I Y F ILVDE+QDTN IQ W+ LL+ Sbjct: 181 QKLLDLNACDFGDLILHVVKILEKNHDIRNIYSNNFKYILVDEYQDTNYIQSRWLNLLSE 240 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGDDDQSIY WRGA+++N F + ++ IRLE+NYRS+ NILS A+ LI Sbjct: 241 KHKNLCCVGDDDQSIYSWRGAEIKNFLEFDQVYKNSKVIRLEENYRSSQNILSVASNLIA 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 NN R+GK L T +G+ + L C N DEA V + I+ + AIL R+ Sbjct: 301 NNQNRVGKTLKTTMEEGDLVKLNCFKNGKDEAIGVSDEIEKKLKKKYSFNNIAILVRAIF 360 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q+R EE L+ +PYRI GG +F+ER EIKD ++YLRLI DD AF+R+VN P R I Sbjct: 361 QTREFEERFLKIGLPYRILGGTKFYERAEIKDCVAYLRLIHQPKDDLAFDRIVNNPKRAI 420 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ--ETADMP 476 G+ T+ ++ + S+ ++L A ++L++E + + L F+ L+D + Sbjct: 421 GESTIKLIHEFSKTNAVSLEIASKKLIEENLIKPKTKIGLSSFLFLMDKWRNDINIKKIN 480 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 V+ +SG +M + +K + + R+EN++EL++A + F L+ FL Sbjct: 481 HVKLLQLVLDESGYSSMLKNKKDLENENRLENIKELLSAMKDFD---------NLENFLE 531 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEE 594 H AL Q D + V +MT+H +KGLEF VF+ G EEG+FP Q S++E G+ LEE Sbjct: 532 HVALATSVDQ-DWDGEKVNMMTMHGSKGLEFDVVFLPGWEEGLFPHQKSIEEKGQNGLEE 590 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRLAYVG+TRA +K +++A R G + SRFI ELPE+ +E+ Sbjct: 591 ERRLAYVGITRAKKKALISFAMNRFYQGNWIDSMASRFIEELPEKFLEKNSFFDDSKDNE 650 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAK 680 + G +R+ K Sbjct: 651 EDFEFNQDFEIEEGTRSPG-WIRYQK 675 >UniRef50_B0MU18 Putative uncharacterized protein n=2 Tax=Bacteroidales RepID=B0MU18_9BACT Length = 813 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 256/664 (38%), Positives = 384/664 (57%), Gaps = 24/664 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ S +L LN QR+AV S L++AGAGSGKTRVL RIA+++ + +PY+I+A+ Sbjct: 1 ME-SQILKGLNQAQRDAVVNYDSPSLIIAGAGSGKTRVLTSRIAYMI-EQGVAPYNILAL 58 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA +MR RI Q++ + + +GTFH + R+LR + PQ F I + D Sbjct: 59 TFTNKAAEQMRERIAQMLPDGRHRYIRMGTFHSVFSRILRDNAERIGFPQSFTIYEPSDC 118 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-------TWQK 172 LLK ++K +NLD+ ++ P I+ K+ + P + + + Sbjct: 119 KNLLKTIVKELNLDDTKYKPAMLASRISYAKNCLVTPGAYLANAGAAAEDRRMQIPEFGN 178 Query: 173 VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAW 232 +Y Y C R G +DF +LLL+ + L + P + Y+E+F ILVDE+QDTN QY Sbjct: 179 IYNIYCARCKRNGAMDFDDLLLQTNILLRDCPDVTARYQEQFKYILVDEYQDTNYAQYVI 238 Query: 233 IRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSA 292 IR L+ KV +VGDD QSIY +RGA++ENI F DFP A +LEQNYRST I+ A Sbjct: 239 IRRLSQLHSKVCVVGDDAQSIYSFRGAKIENILSFKKDFPNAMIFKLEQNYRSTRTIVEA 298 Query: 293 ANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECA 351 AN++IE N+ R+ KK +++G GE I + A+ + +EA VV+ ++ + G AE A Sbjct: 299 ANSVIERNSKRMEKKCFSEGDMGEKIRVLRAYTDREEAEMVVSDLRDKVRAAGDEWAEAA 358 Query: 352 ILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV 411 ILYR+N QS+ LE+AL + +PYRIY G F++ +EIKD L+Y+RL+ N DD AF+R+V Sbjct: 359 ILYRTNNQSQALEDALRRKGIPYRIYKGNSFYDHKEIKDLLAYIRLVINPRDDEAFKRIV 418 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDAL 468 N P RGIGD T++ + ++ R L++W+A L E + + F+ L+ L Sbjct: 419 NYPARGIGDTTVERIALLAKARNLSMWEAVDALTAEPVTDPVQKTIVRKVAEFVALVRGL 478 Query: 469 AQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE---- 524 + A+ L+ + SG+ Y E + + ++N+EEL+ + + F+ E Sbjct: 479 SLARAEKGLYDLGLEIATRSGIIGAYRAENTPEATSALDNIEELLNSMQLFNEQREAEIR 538 Query: 525 -----DEDLMPLQAFLSHAALEAGEGQADTWQ-DAVQLMTLHSAKGLEFPQVFIVGMEEG 578 E+ ++ +L L + D + V LMT+HSAKGLE+ V+IVG+EE Sbjct: 539 AGERQQEERATIEEWLQGVMLMTDMDKDDPQDRNKVTLMTVHSAKGLEYKFVYIVGLEEN 598 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +FPSQ +++ EEERRL YV +TRA + TL+YAE R +G + RPS F+ E+ Sbjct: 599 LFPSQRAVESPDGFEEERRLFYVALTRAKELATLSYAEMRFKWGNMEFSRPSCFLREIDS 658 Query: 639 ECVE 642 +E Sbjct: 659 RYLE 662 Score = 64.7 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/69 (31%), Positives = 31/69 (44%) Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLV 711 R + + Y +G RV H KFG G I +E +L V F G G K L+ Sbjct: 745 RQGESSLVEGAAPVSCGDYAVGDRVSHLKFGAGVIRRIETLASDHKLVVEFSGYGEKTLL 804 Query: 712 AAYARLESV 720 A +A+L + Sbjct: 805 AKFAKLTKL 813 >UniRef50_A8R903 Putative uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=A8R903_9FIRM Length = 729 Score = 785 bits (2027), Expect = 0.0, Method: Composition-based stats. Identities = 250/730 (34%), Positives = 399/730 (54%), Gaps = 42/730 (5%) Query: 17 AVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQ 76 AV +L ++AGAGSGKTRV+ RIA+L+ + P I+A+TFTNKAA EM+ R+ Sbjct: 14 AVTCVDRHLRIIAGAGSGKTRVVTTRIAYLIEQCHIYPNKILAITFTNKAAREMKERVEG 73 Query: 77 LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQ 136 +G + + + T H RLLR + P++F ILD++DQ +L+ K + +D K Sbjct: 74 FLGDTAQAVMISTIHSFCVRLLREDILVHGYPRNFTILDADDQRSILRDAYKQLQVDVKT 133 Query: 137 WPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACDRAGLVDFAELLLR 195 + + + YI++ K + + + N E+ VY Y++ +DF +LL+ Sbjct: 134 YSYHRVLSYISNNKTNFIDANSALARANYEGERIMANVYAFYEKRLAEMFGLDFDDLLIF 193 Query: 196 AHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYG 255 + + + + ++ RFT + VDEFQD + +QY I++L + + +VGD DQ+IY Sbjct: 194 TYHILKEHVEVRKKWQRRFTYLHVDEFQDVDMLQYQIIKMLVKEDSYLCVVGDPDQTIYT 253 Query: 256 WRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG 315 WRGAQV+ I F DFP + T+ L +NYRST IL A+N LI+NN R+ K+L+T Sbjct: 254 WRGAQVDIIMNFEKDFPHSHTVILNENYRSTQPILQASNELIKNNRNRIEKELFTRNESD 313 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYR 375 E I + A ++ +E +V +I + NG + A+LYRSN SR LE+ALL +PYR Sbjct: 314 ERIVHFTAMDDYNEPIWVAGKILSLHHNGVKYRDIAVLYRSNYLSRGLEKALLDQHIPYR 373 Query: 376 IYGGMRFFERQEIKDALSYLRLIAN--RNDD------AAFERVVNTPTRGIGDRTLDVVR 427 IYGG+RF++R EIKDALSYLRL+A DD A +R++N P RGIG +TL+ + Sbjct: 374 IYGGVRFYDRAEIKDALSYLRLLAPKVEGDDKELFKNLAVKRIINLPKRGIGAKTLETLE 433 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 Q + + +++ ++ K +A ++ +F+E+I+A + + +V++D Sbjct: 434 QEAAAKDTNMYEILKQGGFGKG---KAKESIAKFVEVIEACRSCVDTISIDQLLSKVLED 490 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA 547 SG M + + R+ENL+EL++ + N D L +L +L + + Sbjct: 491 SGYMEMLRNDAEIE---RLENLKELISDIANYVENNPDG---SLLDYLQEISLYSDKEDL 544 Query: 548 DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR--LEEERRLAYVGVTR 605 D + VQLMT+H+AKGLEF +VF+ + +G+FP++ S++EGG+ LEEERRLAYV TR Sbjct: 545 D-NGEFVQLMTIHAAKGLEFDRVFVYSLCDGIFPNERSINEGGQQALEEERRLAYVAFTR 603 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE---------------VRLRATV 650 A ++L L+ + Y + SRF+ E+P++C++E + Sbjct: 604 AKKQLFLSDSYGYS-YVLDKLKTTSRFVKEIPQDCLQEVGAKPRNSFASDVDTYQGSGFS 662 Query: 651 SRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKW 709 S + + + G V H FGEG ++ +EG +AF GI+ Sbjct: 663 SLGNTTDEAIEHTSKKKGKIRKGDLVVHDVFGEGIVIKLEGE----LAVIAFDKKYGIRK 718 Query: 710 LVAAYARLES 719 ++A +A L Sbjct: 719 ILATHASLHK 728 >UniRef50_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW02_9PROT Length = 699 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 263/713 (36%), Positives = 376/713 (52%), Gaps = 17/713 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q AV A L+LAGAGSGKTR ++HRI L+S +P+ I+AVTFTNKA Sbjct: 1 MADLNPAQLAAVEAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKA 60 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 AAE++ R+ +L+G GG+ GTFH ++ RLLR + P+ FQ++D++DQ L+KR+ Sbjct: 61 AAELKSRLSELIGDDGGGVVSGTFHAISLRLLRRYAEALAYPRSFQVIDADDQKALVKRI 120 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 +K N+ + P + +I K G + + +Y YQ+ Sbjct: 121 LKQANIPADRLHPSFLLGWIEHCKHAGQTAEQ-APACDWNGVDLRGLYSTYQQQLREHER 179 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF++L+L L I + + RF +ILVDE+QDTN +Q+ W+ LL + +V Sbjct: 180 MDFSDLILNCVLLMREHADIAEALQRRFDHILVDEYQDTNPVQHEWLTLLCAGHRNLTVV 239 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA + +I F + GA T RLE+NYRST IL ANA+I N R K Sbjct: 240 GDDDQSIYGWRGADIRHILEFERIWSGAGTHRLEENYRSTGAILDLANAVISKNEDRHDK 299 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEA 366 L G +E DEAR + +++ W+D G A E A+LYRSN QS LE+ Sbjct: 300 SLRATQEQGLLPQWQVCNDEYDEARQIGTQLQAWRDAGYAWQEMAVLYRSNRQSLALEQI 359 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + +PYRI GG+ FFER EIKDAL+Y L+ D R+ N P RGIG + + + Sbjct: 360 LREQGLPYRIVGGVGFFERLEIKDALAYWALLNGCGDALQLMRICNRPKRGIGLKGQEQL 419 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 L + L + G A L LI +L + +P +++ Sbjct: 420 AAQLSGSGLRAHEWLD--LVAEGGVGGVAGKLAPLARLIASLRPQAGTLP-DRGLMALLQ 476 Query: 487 DSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ 546 +SG + + +RI+N+ L E++ + + G+ Sbjct: 477 ESGYLDSLQAMGELEAASRIDNIHTLQRYIE--LTMEQEITPIEFMDRAALLQSGEEAGR 534 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG-RLEEERRLAYVGVTR 605 D +++V LM+LH AKGLEF V + G+EEG+ P Q +LD+G + EERRL YVG+TR Sbjct: 535 DDENEESVTLMSLHRAKGLEFDCVVLPGVEEGLLPHQRALDDGEAGIAEERRLLYVGITR 594 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVE 665 A + L LT A RRL+G+ Y PSRFI LP +++ A + M Sbjct: 595 ARRHLKLTTARVRRLFGETHYPLPSRFIKNLPPSMLQQDTPVA----------TASAMQN 644 Query: 666 NDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 N +G V H FGEG I++ EGSG+ R+ V F+ GIK L+ YA L+ Sbjct: 645 NSGDMGVGSNVLHPSFGEGVIIDFEGSGDAIRVTVQFRKAGIKRLMLKYAALQ 697 >UniRef50_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LDC5_MAGSM Length = 673 Score = 783 bits (2024), Expect = 0.0, Method: Composition-based stats. Identities = 286/667 (42%), Positives = 398/667 (59%), Gaps = 23/667 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L LN QR+AV L+VLAGAGSGKTRVL R+AW++ + SP ++AV Sbjct: 1 MDHPT-LHHLNAPQRQAVTTLDGPLMVLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQG----GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDS 116 TFTNKAA EMR+R+ L+G W+GTFHG++ R+LR + +DF ILDS Sbjct: 60 TFTNKAAKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQYADRLGFERDFTILDS 119 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI---QSYGNPVEQTWQKV 173 DQ RL KRL + + + W P++ I KD+G+RP + + Q++ Sbjct: 120 SDQERLFKRLCEELGFADAYWTPKRLTHTIGRWKDDGIRPQDLTDREIRKAWERARIQQM 179 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+ YQ+A ++ +DF +LLL +LW +P IL +++RF +LVDE+QDTN++QY WI Sbjct: 180 YERYQQALLQSNAMDFGDLLLHCLQLWQQEPAILAAFQQRFRYLLVDEYQDTNHVQYRWI 239 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 L+G + +VGDDDQSIY WRGA++ENI +F DFP + IRLEQNYRS+ NIL AA Sbjct: 240 CALSGLHQNLCVVGDDDQSIYSWRGARIENILKFEEDFPQTKIIRLEQNYRSSGNILKAA 299 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 + LI +N GR+ K+LWT+ A G+ I Y A N+ DEARFV + I T G + AIL Sbjct: 300 SGLINHNKGRMEKQLWTEDAQGDAIHFYQAENDEDEARFVASEILTLCPAG-DYQQAAIL 358 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 R+ Q+R LEE L++A +PY++ GG+RF +R E++DAL+YLR++A+ DD AFERV+N Sbjct: 359 VRTARQTRSLEEGLMRAGIPYQVVGGLRFLDRAEVRDALAYLRVVASNRDDVAFERVINL 418 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-T 472 P RGIG L +R+ + + +L A R ++ + G AA L F++LI+ Sbjct: 419 PKRGIGPGALQSLREIASQERCSLLHAARFAVESNTMKGAAAKGLAAFIQLIEHARSMLA 478 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 D+ +++ SG R EKG RI+NL+EL A + LQ Sbjct: 479 DDITPAEMLTKLLALSGYRDYVR--DLEKGNDRIDNLDELRNALARTES---------LQ 527 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR- 591 FL AL + V + TLH+AKGLEFP VF+VG+EE + P +++L E Sbjct: 528 LFLEEVALATDLQDGGPVANRVVISTLHAAKGLEFPWVFLVGVEEDVMPHKLALTEQPEI 587 Query: 592 -LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 LEEERRLAYVG+TRA Q+L LT A R L+ K V SRF+ ELP+E +E+ R + Sbjct: 588 GLEEERRLAYVGMTRAKQRLYLTMARRRWLFNKPVMPIKSRFLKELPQEILEDRGFRVSS 647 Query: 651 SRPVSHQ 657 R + Sbjct: 648 RRGATGS 654 >UniRef50_C1ZAM6 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZAM6_PLALI Length = 845 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 248/642 (38%), Positives = 351/642 (54%), Gaps = 14/642 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LLD L Q AV LLVLAG GSGKTRV+ RIA L+ P I+A+TF Sbjct: 1 MTQLLDDLTPSQAAAVEHFEGPLLVLAGPGSGKTRVVTRRIARLI-ERRVHPAEILAITF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM R+ L+ + V TFH R+LR + L +F ILD +DQ Sbjct: 60 TNKAAREMAERVEHLIPG--RRVAVSTFHKFCARILRQYGGVVGLKPNFSILDVKDQDAA 117 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-----QSYGNPVEQTWQKVYQAY 177 LK +K D + P + W I K+E + P + G ++ K Y Y Sbjct: 118 LKEAVKEEGFDPTHYSPSRIGWRIGQLKNECISPGMFAQQAGERVGTHLDSVVAKAYGRY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q+ A VDF +LLL + P++ Q ER+ ILVDE+QDTN QY + L+ Sbjct: 178 QQILLDANAVDFDDLLLHVVTILKENPNLRQSLDERYRFILVDEYQDTNQAQYQIVSALS 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + GD DQSIYGWRGAQ+ENI RF DFP + +RLE N+RST IL+AA+ LI Sbjct: 238 QNEPNLCATGDPDQSIYGWRGAQIENILRFERDFPRVKMVRLEDNFRSTPEILAAADDLI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRS 356 +N R K L T G P+ + + EA + I+ +G ++ AI YR Sbjct: 298 RHNTQRKAKSLRTSNPSGLPVEIRQYADGFQEADSLAAEIRERVASGERQYSDFAIFYRV 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N+ SR +E AL +A +P+ I GG+ F+ER E+KD ++YLR+I N +D AF R+VNTP R Sbjct: 358 NSLSRSIETALGRARVPFAITGGVAFYERTEVKDLIAYLRVIENPDDRPAFRRIVNTPVR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 GIG + + + + + R L LW A ++ L +A +L+ F L+D LA+ + P Sbjct: 418 GIGKNSQEKLDRWASARNLNLWDAVHQIDASIGLPKKAEYSLKLFANLLDELARRS-HGP 476 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + + +++ +G + E+ R N+EELV + RQF + + L FL Sbjct: 477 IAELLEVIVERTGYLQNLSGLEPEEYANRKANVEELVASARQFDQDHVEGG--SLSEFLE 534 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEE 594 +L D VQLMTLHSAKGLEFP V++VG+E G+ P + SL EG ++EE Sbjct: 535 TCSLVQDADTIDESAGQVQLMTLHSAKGLEFPCVYLVGVEHGLLPHERSLREGDPLQIEE 594 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 ERRL +VG+TRA ++L LT+ R +G+ + S+F+ EL Sbjct: 595 ERRLLFVGMTRAREELYLTWTRLRSTHGRLLSTIASQFLTEL 636 Score = 48.9 bits (116), Expect = 7e-04, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%) Query: 668 SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLESV 720 ++LG +VRH ++G G +V + + ++V F+ K + ++A L+ + Sbjct: 791 HRFQLGMQVRHPEYGRGLVVGLSLANNRPTVRVEFESSHEEKDFIISHAPLQPL 844 >UniRef50_A9NHW3 DNA helicase II n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NHW3_ACHLI Length = 703 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 258/729 (35%), Positives = 389/729 (53%), Gaps = 37/729 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L+ LN +Q++A L V+AGAG+GKTR L RIA+L+ +P SI+AV Sbjct: 1 MKMTNWLEQLNPQQKKAATHISGPLFVVAGAGTGKTRTLTTRIAYLIEELGVAPDSILAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQILDSED 118 TFTNKAA EM+ RI ++ G W+ TFH ++LR +F I+D +D Sbjct: 61 TFTNKAAREMKERIVEMAGPYATNTWIYTFHAFGVKVLRRDIEHLKMGYTVNFNIIDEDD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 +++++IK +NLD K + I+ K + Y + + V + Y Sbjct: 121 AKAMVRKIIKDLNLDTKSYKANAIRHKISLFKHLNID------YFDNANERL--VLEKYT 172 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 L+DF +L + ++L+ HIL++Y+ +F ILVDEFQDT+++QY ++LLAG Sbjct: 173 HELITNNLLDFDDLQILTYKLFDEHQHILEYYQNKFNFILVDEFQDTDHLQYKMMKLLAG 232 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGA----ETIRLEQNYRSTSNILSAAN 294 + +VGD DQSIY +RGA +N + FLNDF I L+ NYRST IL AN Sbjct: 233 KQKNLFVVGDPDQSIYAFRGANYDNAKFFLNDFKNEDGSKAEIVLDLNYRSTKEILKFAN 292 Query: 295 ALIENNNGR-LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAI 352 LI +N R K L TD +G ++ A ++L+EA+ + N I+T + G ++ AI Sbjct: 293 KLITSNKNRPFSKSLETDLGNGLKPFIWSAQSDLNEAQMIANEIETLIKDGGYKYSDIAI 352 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NA SR E+ ++ ++PY +YGG+ F++R+EIKD L+Y+RL+ + N D R++N Sbjct: 353 LYRNNALSRSFEDVFMKYNIPYVLYGGISFYQRKEIKDILAYIRLVVDPNLDFYLMRIIN 412 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP R IG TL+ ++ +++ ++++ A ++G+ +L F LI + + Sbjct: 413 TPRRAIGPTTLNKLQSYAKEHNMSMFDAIDSF----DISGKTKQSLLEFKTLILEMKFDF 468 Query: 473 ADMP-LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + L D V +G M E +K E + RIE ++EL Q E L L Sbjct: 469 QNFTELGKVVDYVAYKTGYNQMLETDKDEYSEERIEYIKELKNPFVQAEAYYEGTFLEKL 528 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L AL + + DAV L T H KGLEF VF+ MEE +FPS S + Sbjct: 529 MQLLDQIALYSDLD-RNKVSDAVVLSTFHQVKGLEFKVVFMTVMEEQIFPSSQSFMDLNE 587 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 LEEERR+AYVGVTRA ++L LT +E R LYG +Y RPSRF+ E+ E +EV + Sbjct: 588 LEEERRIAYVGVTRAKERLYLTRSEKRLLYGALIYPRPSRFLKEMMPE--QEVFTKKGNY 645 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 P K G V H FG+G +V+++ +AF GIK L Sbjct: 646 TPQQSTSSN--------YLKPGDSVTHQVFGKGIVVSVDKD----IATIAFSMPHGIKQL 693 Query: 711 VAAYARLES 719 + ++ ++ Sbjct: 694 LESHPSIKK 702 >UniRef50_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ETX5_SORC5 Length = 820 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 259/665 (38%), Positives = 372/665 (55%), Gaps = 20/665 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 + LN+ Q A + LL+ AGAGSGKTRV+V+RIA L+ PY I+AVTFTNKAA Sbjct: 22 EELNEPQARAASHAAGPLLIFAGAGSGKTRVIVYRIANLIVTHRVPPYRILAVTFTNKAA 81 Query: 68 AEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 EM+ R+ L+G +WVGTFH + RLLR HH A L ++F I D +DQ ++ R+ Sbjct: 82 TEMKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHEAAGLDKNFIIYDDDDQRAVMNRV 141 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 +K +NLD++++PPRQ + I+++K EG P + G + + ++AY+ A Sbjct: 142 LKELNLDDRRYPPRQVLSRIHAEKQEGRGPAEFERKG-YFDDAIARCFEAYERHLKAASA 200 Query: 187 VDFAELLLRAHELWLNKP--HILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +LLL + P + + R RF ++LVDEFQD N +QY +R + Sbjct: 201 VDFDDLLLAVLRI-AEDPTSYAGEDLRGRFRHVLVDEFQDVNQVQYRLVRAFCKSHDNLC 259 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY WRGA V ++ F DFP A ++LEQNYRS +++ A +I + + R Sbjct: 260 VVGDDDQSIYRWRGADVRIVRGFRRDFPHATVVKLEQNYRSIGHVVRGALGVIRHASDRE 319 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+LWT DG PI + A +E DEA +VV ++ G + E A+ YR +AQSRVLE Sbjct: 320 PKELWTANQDGAPIDVVAADSEHDEAAWVVECVRELIAEGVSPNEIAVFYRIHAQSRVLE 379 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 E L +A +PY+I GG RFFER E+K+ LSYLR+IAN D R++N P R IG T+D Sbjct: 380 EVLREARIPYQIIGGTRFFERAEVKNLLSYLRVIANPKSDVDLNRIINVPARKIGQSTVD 439 Query: 425 VVRQTSRDRQLTLWQACRELLQE------------KALAGRAASALQRFMELIDALAQET 472 + Q + ++L++A LL+ LA A +L F +LI L E Sbjct: 440 KLIQAADLLGVSLFEAIDPLLEGRVPPSAMPGGQLPPLASAAKRSLLGFRDLIHGLMTEA 499 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEE-DEDLMPL 531 + V+ SG EQE + + R++NL ELV + + D L Sbjct: 500 KSASPSALAEEVLARSGYAKALEQEDSVESEARLQNLRELVQSLVDYEQEATAAGDEATL 559 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS-QMSLDEGG 590 +L +L + V +MT+H+AKGLEF VF+ GMEE +FP + G Sbjct: 560 AGYLERVSLVSDVDALADVP-KVAMMTIHAAKGLEFHAVFLTGMEEDLFPFRSQDPNRKG 618 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEERRLAYV +TRA ++L +T+A R ++G+ Y PSRF+ +LP V + A++ Sbjct: 619 DIEEERRLAYVAITRARERLWITHAARRAIFGQTRYGLPSRFLADLPPASVRPIATPASM 678 Query: 651 SRPVS 655 Sbjct: 679 MAQRR 683 Score = 44.7 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Query: 673 GQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 G RV H +FG G + +++ G V F G G K + A+ Sbjct: 775 GMRVYHERFGPGVVESVDP-GADPIATVKFSGWGKKRIKVAF 815 >UniRef50_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB Length = 850 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 304/819 (37%), Positives = 422/819 (51%), Gaps = 112/819 (13%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LD LN +QR AV AP +L+LAGAG+GKT+ L RI L++ P I+AVTF Sbjct: 25 PAPYLDDLNPEQRAAVLAPDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVTF 84 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM+ R+G+++G +G W+GTFH ++ ++LR H L +F ILD++DQ+RL Sbjct: 85 TNKAAREMKDRVGRMLGQVEGMPWMGTFHSISVKILRRHAELVGLKSNFTILDTDDQIRL 144 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKVYQAYQEAC 181 LK+LI A N+DEK+WP R I+S K+ P + S + ++YQ YQ+ Sbjct: 145 LKQLIVAENIDEKRWPARLLAGLIDSWKNRAWTPAKVPSSEASAYNNRGTELYQMYQDRL 204 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 DF +LLL ++ P +L Y+ F ILVDE+QDTN QY W+RLLA Sbjct: 205 RALNATDFGDLLLHVVTIFQTHPDVLAQYQRWFRYILVDEYQDTNVAQYLWLRLLAQAHR 264 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDDDQSIYGWRGA+V NI RF DFPGA +RLEQNYRST +IL+AA+A+I N Sbjct: 265 NICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVVRLEQNYRSTPHILAAASAVIAANK 324 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG-----ALAECAILYRS 356 GRLGK LWT+ GE + L ++ +EAR++ + ++ Q +L + AIL R+ Sbjct: 325 GRLGKTLWTEREAGEKVRLIGHWDGEEEARWIGDELEALQRGTRAMDPHSLDDMAILVRA 384 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + Q R E+ L +PYR+ GG RF+ER EI+DA++Y RL + DD AFERVVNTP R Sbjct: 385 SHQMRAFEDRFLTIGLPYRVIGGPRFYERLEIRDAMAYFRLAVSPADDLAFERVVNTPKR 444 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G+GD +++ +R ++L RELL + + G+ A+ L+ F+ DA A+ Sbjct: 445 GLGDTAQQNIQRRARAAGVSLLGGARELLAQGGIGGKGANQLRTFVTSCDAWHYFVANRG 504 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS---------------- 520 ++ R + + + EN E + R+ Sbjct: 505 NELEIKRYADQLFVLREERSRLLRELELLDENDEARESVEREIVICGARIGRCERDIAIL 564 Query: 521 --------------------------------YNEEDEDLMPLQAF------LSHAALEA 542 E + L+ F L H +L Sbjct: 565 DGNHVLLAEQILEESGYTAMWQADKTPEAPGRLENLKELVKALEQFENLQGFLEHVSLIM 624 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--RLEEERRLAY 600 E +++ + V +MTLH+AKGLEFP VF+ G E+G+FPSQ S+DE G +EEERRLAY Sbjct: 625 -ENESEEAAEKVSIMTLHAAKGLEFPVVFLPGWEDGLFPSQRSMDESGLKGVEEERRLAY 683 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE------------------ 642 VG+TRA T+++A RR+YG+ PSRFI ELPE VE Sbjct: 684 VGITRAEALCTISFAANRRVYGQWQSALPSRFIDELPEAHVEVLTPPGLYGGGYGAAGMQ 743 Query: 643 -----------------------EVRLRATVSRPVSHQRMGTPMVEND----SGYKLGQR 675 R+ Q D S + L R Sbjct: 744 AGFGGGSGIEQRAASADAYNSPGWKRMTERAPTRPMAQPREARNSVIDLDAISSFTLDDR 803 Query: 676 VRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAY 714 V HAKFG GT+V +EG +L VAF G+K LVA + Sbjct: 804 VFHAKFGYGTVVGIEGD----KLDVAFDKAGVKKLVARF 838 >UniRef50_D1NAY9 UvrD/REP helicase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1NAY9_9BACT Length = 679 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 234/672 (34%), Positives = 367/672 (54%), Gaps = 14/672 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ +L LN +Q A +LVLAGAG+GKTRV+ RIA++++ P I+ + Sbjct: 1 MEKDEILKQLNPEQASAAGTVNGPVLVLAGAGTGKTRVITFRIAYMLA-CGIPPQMILGM 59 Query: 61 TFTNKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+ QL+ + +GTFH ++LR F I D DQ Sbjct: 60 TFTNKAAREMRERLAQLVQPQIARKVTLGTFHSFCIKILRRDIAKLGYLPSFTIADESDQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-VEQTWQKVYQAYQ 178 +LK+ + + + +P + I K++ P + + + E T ++Y+ YQ Sbjct: 120 QGVLKQAAGQLGCNYEGFPLGEVQSMIGRWKNKLFFPEDARRHADTTFEATAAQLYEEYQ 179 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +DF ++LL + L+ P +L+ YRE + +L+DE+QDTN Q+ ++LL G Sbjct: 180 TLLEMQNSLDFDDMLLLVYRLFTEHPDVLERYRETYQYLLIDEYQDTNAAQFTIVKLLTG 239 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D + +VGDDDQSIY WRGA + NI F + FPGA+ ++LEQNYRST++IL+AAN +I Sbjct: 240 DRCNLCVVGDDDQSIYSWRGADISNILGFPDHFPGAKVVKLEQNYRSTTSILNAANVVIG 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRS 356 +N R K+LW++ DGEP+ + N EA F+ + I +++ + AILYRS Sbjct: 300 SNANRHEKQLWSNLGDGEPVKIVTTENGESEAEFIGSMITQMKNDKPELRYQDFAILYRS 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N SR LE+ L + +PYR+ GG FF+R+EIKDA++YL+L+ N DD + R++ TP R Sbjct: 360 NHLSRQLEQTLRRQQIPYRLVGGQEFFKRREIKDAVAYLKLLVNPCDDQSLLRILGTPPR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD-M 475 G+ + +D ++ R + +++ E +K L +AA+A + F E+ + A+ Sbjct: 420 GLAQKAVDSLKTGRRAKHKPMFELLAEEEFQKELTPKAAAAAREFAEVYAKYKERFAEPG 479 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 L + +K+ G ++ + R EN++E +TA Q+ + + L+A Sbjct: 480 ALAWKITEFLKEIGYLDGLQRIYKDLKDAMKRRENVDEFITAITQYEERQAEPP--TLEA 537 Query: 534 FLSHAALEAGEGQADTWQ---DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 +L + AL + + DAV LMT+H++KGLEFP VF+V ME +FP + +L+EG Sbjct: 538 YLENLALLEESDKVEEETGTVDAVTLMTVHASKGLEFPVVFVVAMERNIFPHERALEEGS 597 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 +EEE RL YV +TRA + L L A+ R G PS F+ L +E E + Sbjct: 598 -VEEELRLFYVAITRARKYLYLLRAKERMQRGITRATLPSPFLHLLTDEVAERTTPEELL 656 Query: 651 SRPVSHQRMGTP 662 + Sbjct: 657 RPASEDEVRQAF 668 >UniRef50_Q7UIR9 ATP-dependent DNA helicase n=2 Tax=Planctomycetaceae RepID=Q7UIR9_RHOBA Length = 787 Score = 775 bits (2003), Expect = 0.0, Method: Composition-based stats. Identities = 240/643 (37%), Positives = 353/643 (54%), Gaps = 9/643 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + L Q EAV LL++AG GSGKTRV+ HRIA+++ P+ I A+TF Sbjct: 1 MDAITKDLTAAQAEAVQHIDGPLLIIAGPGSGKTRVVTHRIAYMLQS-GIRPWQIAALTF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R+ L +W+GTFH + LR + L +++ I DS D Sbjct: 60 TNKAADEMRSRVNLLAPN--QPVWMGTFHRFCAQQLRRYAPMVGLAENYSIYDSSDSKSA 117 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEAC 181 +KR I A + P Q I++ K+ + P Q G + KVY YQ+ Sbjct: 118 MKRAITAAGVSTSHTSPEQIASAISNAKNRLITPEIMAQQTGRAGDTVAAKVYPVYQQQL 177 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 A VDF +LL L P + + E+ I+VDE+QDTN QYA +R L+ D Sbjct: 178 LTANAVDFDDLLFHFARLLRENPEVRSNLDEKLKYIMVDEYQDTNLAQYAIVRALSVDHP 237 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + + GD DQS+YGWRGA + NI F D+P +T+RLEQNYRST IL A+ LI +N Sbjct: 238 NLAVTGDPDQSVYGWRGADLNNILDFEKDYPAVKTVRLEQNYRSTPEILRVADQLIRHNR 297 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQS 360 R K L+TD GE ++L + EA + + I + AI+ R NA + Sbjct: 298 RRKQKNLFTDNPTGEAVTLRQYEDGYKEADGIADEIANQMIAGNAEPRDFAIMCRMNALT 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +E AL +PY+I G+ F++R+EIKD L+YL LI N D AF+RV+NTPTRGIG Sbjct: 358 RSIEHALRNRGIPYQIVNGLEFYQRKEIKDLLAYLHLINNPRHDVAFQRVINTPTRGIGA 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +TL+ +++ + D ++ + +A R + + L+ RA + + F+ L D L A L Sbjct: 418 KTLERIQRFADDHRIPMLEAARRVDEIDTLSKRAKTLVTSFIRLYDRLC-IKATATLEDL 476 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTR-IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +I++ E+ E+ I N++E ++A +F ++ L+AFL A Sbjct: 477 LRFLIEEIKFVAYLERTTPEQQDNNPIANVDEFISAAVEFDQMHPEDG--SLEAFLEQVA 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + + + V LMTLH+AKGLEFP+VFI+ +E+ + P + S ++ +LEEERRL Sbjct: 535 LVSDTDAFEDSNNRVTLMTLHAAKGLEFPRVFIIAVEDNLLPHRRSKEDETQLEEERRLL 594 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 +VGVTRA Q L ++YA+ R G+ PS F+GELP + ++ Sbjct: 595 FVGVTRAEQWLQISYAKLRSFRGENQPAIPSMFLGELPRDEMQ 637 Score = 49.7 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 670 YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 Y+ G VRH+++GEGTIV + G G ++ F+ A+A++E V Sbjct: 736 YREGSTVRHSEYGEGTIVALTGKGPKRTAKIQFEETEE-TFRLAFAKIELV 785 >UniRef50_C0R0K3 ATP-dependent DNA helicase n=2 Tax=Brachyspira RepID=C0R0K3_BRAHW Length = 665 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 235/657 (35%), Positives = 362/657 (55%), Gaps = 18/657 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++QR+AV LL LAGAGSGKTRV+ RIA+L+ P I+AVTFTNKAAAE Sbjct: 5 LNEEQRQAVEHIDGPLLALAGAGSGKTRVITERIAYLIK-HGVLPSQILAVTFTNKAAAE 63 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 MR RI +L+ + V TFH R+L+ +F I S D L++ +++ Sbjct: 64 MRERITKLLKEKPKQLVVSTFHSFCVRVLKGDIEKLGYKNNFSIYSSSDSRTLIRNILRE 123 Query: 130 MNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDF 189 + ++ + WYI+ K+ ++P+ ++ + + +E+ ++VY+ YQ VDF Sbjct: 124 IKINTLNYDENLFAWYIDRFKNNLMKPYEVEPH-DDLEKIAKRVYEVYQSYLKGYNAVDF 182 Query: 190 AELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDD 249 +L+ +L++ P +L Y+ERF I+VDE+QDTN QY LLA + +VGDD Sbjct: 183 NDLINLTIDLYVEFPEVLNKYQERFRYIMVDEYQDTNFAQYKLTTLLASKYRNIAVVGDD 242 Query: 250 DQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLW 309 DQSIY +RGA V NI F N++P A+ + L +NYRST IL AA+++I NN R KK+ Sbjct: 243 DQSIYAFRGADVSNILSFENEYPDAKIVTLTKNYRSTKAILEAAHSVISNNTQRKDKKVV 302 Query: 310 TDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVLEEALL 368 +G +G P ++ +E +EA+FV + I + + A+L+R NAQSR+ EEA Sbjct: 303 AEGEEGIPPTIMPCEDEREEAQFVADSIINYSISKRLNYEDFAVLFRMNAQSRLFEEAFR 362 Query: 369 QASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQ 428 +PY + G +F+ER+EIKD L+YL L N D+ + RV+N P RGIG ++ + + Sbjct: 363 LRGLPYTVVGAFQFYERKEIKDILAYLNLFVNPEDEVSLLRVINIPKRGIGAVAINNLNE 422 Query: 429 TSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-------AQETADMPLHVQT 481 S ++L++ ++ +A + ++ F+E+ID L+ Sbjct: 423 ASIKNGVSLYETLLNYESMDDISPKAKAGIKDFLEVIDHYHNLFTVDKNALERPKLYENI 482 Query: 482 DRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++ + E+G ++EN+E L+ ++ + ++ L+ +L Sbjct: 483 NKFLDVIAYHNEILNSSDTKEQGAKKMENVESLMNGILEYEKSNKN---ATLKNYLDRIL 539 Query: 540 LEAGEGQADTWQ--DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L + E Q D + LM++H+AKGLEFP V+I GME+G+ P Q SLDE G LEEERR Sbjct: 540 LMSIEEQNDDEDKKKGIMLMSIHAAKGLEFPYVYICGMEDGIMPHQKSLDENG-LEEERR 598 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 L YV +TRA + LTLTY +R GK+V PS F+ E+ EE+ + Sbjct: 599 LCYVAMTRAKKHLTLTYCRSRTKMGKKVECTPSVFLEEMSANLPEEMAMNEEEFFSN 655 >UniRef50_D2R5I6 UvrD/REP helicase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R5I6_9PLAN Length = 800 Score = 772 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 253/641 (39%), Positives = 366/641 (57%), Gaps = 8/641 (1%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 S LLDSL D QR AV LL+LAG GSGKTRV+ HR+AW+++ I+A+TFT Sbjct: 20 SPLLDSLTDAQRAAVCHIEGPLLILAGPGSGKTRVVTHRVAWMLAS-GIPARQILALTFT 78 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EMR R+ +L +W+GTFH R+LR++ L ++F I D++D ++L Sbjct: 79 NKAADEMRGRLERLAPRQA--VWMGTFHRFCARMLRSYAELVGLRENFSIYDTDDSRKIL 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACD 182 + + +D P I+ K+ + + G+ + +KVY YQ+ Sbjct: 137 QIALDEEGIDLTHTSPDAIAQAISWAKNNLVTADRYEPRRGHAIGGIVEKVYPTYQKLML 196 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 R+ VDF +LL+ L P + + ER+ I+VDE+QDTN QY +R L+ D Sbjct: 197 RSSAVDFDDLLVHVAILLKENPEVRRQLDERYRYIMVDEYQDTNLAQYTIVRALSIDHPN 256 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + + GD DQSIYGWRGA + NI F D+P + +RLEQNYRST +IL A+ LI +N Sbjct: 257 LAVTGDPDQSIYGWRGANLSNILEFEKDYPKVKVVRLEQNYRSTKSILHIADQLIRHNIR 316 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG-GALAECAILYRSNAQSR 361 R K L+TD G + L + DEA + I G + AI YR+NA SR Sbjct: 317 RKEKDLFTDNPQGNRVRLATFPTQRDEAETIAEEIAHEVRTGKRRPRDFAIFYRTNALSR 376 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E AL + +PY+I G+ F++R+EIKD L+YL+L+ N DAA R++NTPTRGIG Sbjct: 377 QIEHALREQVIPYQIVNGLEFYQRKEIKDVLAYLQLVNNPRSDAALLRIINTPTRGIGKS 436 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T+ +++ +RDR + L A R LA ++A A+ +F+ ++D L A P+ Sbjct: 437 TIAKIQEVARDRAIPLLDAARMAGTISGLAKKSAVAVAKFVAMLD-LIGTKATAPVEELV 495 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 V+ ++G R + E + E+ R+ NLEEL+TA +F L+ FL ++L Sbjct: 496 GYVLTETGYREVLENSEAEEDHERLANLEELLTAASEFDLRNPGG--AGLEQFLEDSSLV 553 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 A ++ D V +MTLH+AKGLEFP V+IV EEG+ P + S + +LEEERRL +V Sbjct: 554 ADTDAFESDSDKVTMMTLHAAKGLEFPAVYIVACEEGLLPHERSRRDEEKLEEERRLLFV 613 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 G+TRAMQ LTLT+A+ R G++ S F+ ELP +E Sbjct: 614 GITRAMQDLTLTWAQYRMFRGQQAPAVASSFLMELPRHEME 654 Score = 45.1 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 667 DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF-QGQGIKWLVAAYARLESV 720 +K G V+H ++G G IV + G+G V F +G + V +++L + Sbjct: 744 PYAFKHGMMVQHPEYGPGQIVALSGNGAKRVANVRFMEGGEERKFVIVHSKLTPL 798 >UniRef50_D2MPE9 Putative ATP-dependent helicase PcrA n=1 Tax=Bulleidia extructa W1219 RepID=D2MPE9_9FIRM Length = 710 Score = 771 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 265/720 (36%), Positives = 389/720 (54%), Gaps = 24/720 (3%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SLN +Q+EAV L V+AGAGSGKTRVL RIA+LM + P I+A+TFTNKA Sbjct: 4 IQSLNPQQKEAVLDEHQYLRVIAGAGSGKTRVLTMRIAYLMEEKKVWPSKILAITFTNKA 63 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EM R+ LM V T H L R+LR P+ F ILD EDQ +LK Sbjct: 64 AREMETRVLSLMKEEVSKPTVCTIHSLCVRILRQEIEAMGYPKSFTILDVEDQKAILKEY 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP--VEQTWQKVYQAYQEACDRA 184 K ++D+ + A+ YI++ K E + + +E+ K+Y+ Y Sbjct: 124 YKEHSVDKNEISFASALSYISNNKTENVSVEEANKIADFSSLEKKKVKIYEYYLHRQKEL 183 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +L+L L+ +LQ +++ F ILVDEFQD + IQY I+ L G ++ Sbjct: 184 FALDFDDLILWTVRLFDRFEVVLQKWQQHFHYILVDEFQDIDRIQYQLIKQLTGKDNSLL 243 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WRGA V I F DF +TI L QNYRSTS+IL AN++I+NN R+ Sbjct: 244 VVGDPDQTIYTWRGADVRIIVNFEKDFSNTKTILLTQNYRSTSSILKGANSVIKNNKQRV 303 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K+L+TD E I + A ++ +A ++ +K+ + G +E A+LYR+N SR LE Sbjct: 304 DKELFTDNQSKEKIYHFSAGSDEYQAAWIAQEMKSIRLKTGTYSEMAVLYRANYLSRALE 363 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +AL+ +PY IYGG+RFFERQ +KDALSYLRLI DD + RV+N P RG+G +T++ Sbjct: 364 KALMDERIPYIIYGGLRFFERQVVKDALSYLRLIVV-GDDLSLTRVLNRPKRGLGLKTVE 422 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALA--QETADMPLHVQTD 482 ++ +R+ + ++ ++ E+ G+ +++F++ ++ Q+ + L + Sbjct: 423 MIAHRARELNCSQFELLQK---EELFKGKTQDTIRQFVQRVERWRSLQQKGGLELFDFFE 479 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 V+ +SG R E EK +NL L + L+ +L AL Sbjct: 480 LVMDESGYRAFLEAEKDT------DNLGHLKSLMEDIRDFSRYHPEATLEEYLQSVALYG 533 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRLAYV 601 + + D VQLMT+H++KGLEF VF+ + EG+FPS+ SL EG +EEERRLAYV Sbjct: 534 DKEELVEN-DFVQLMTVHASKGLEFDTVFVSDLNEGIFPSERSLQEGYHGVEEERRLAYV 592 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS--HQRM 659 TRA + L LT A + V PSRFI E+ + +E + + + S + + Sbjct: 593 AFTRARKHLYLTDAGGYSFMLQRVKT-PSRFIDEIEDLYIEHRGVVKSQEKQESSFYSQF 651 Query: 660 GTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLE 718 V +K G + H KFGEG ++ EG + VAF G K L A++ L Sbjct: 652 MEKPVREVKKWKKGDIIEHVKFGEGVVILQEGE----FVTVAFAYPFGTKRLQASHPSLT 707 >UniRef50_Q1DAU6 ATP-dependent DNA helicase, UvrD/REP family n=6 Tax=Cystobacterineae RepID=Q1DAU6_MYXXD Length = 691 Score = 770 bits (1989), Expect = 0.0, Method: Composition-based stats. Identities = 247/679 (36%), Positives = 364/679 (53%), Gaps = 13/679 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVE--NCSPYSIM 58 MD L LN QREAV LLVLAGAGSGKTRV+ HRI L++ +I+ Sbjct: 1 MD----LSKLNPPQREAVVTLEGPLLVLAGAGSGKTRVITHRIVHLLNERPGLIMARNIL 56 Query: 59 AVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 AVTFTNKAA EM+ R+ + G G+ V TFH +LR P+ F I D D Sbjct: 57 AVTFTNKAATEMKERLVHMAGPRAQGVLVCTFHAFGAEMLREDIHRLGWPKKFAIADMGD 116 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAY 177 QL ++R ++ +D++ + R+ + I+ K+ G P + G+ + VY Y Sbjct: 117 QLANIRRAMREHKIDDRSFDARKVLNLISKAKNSGKAPEPKPEGIGDDYDLITHMVYPDY 176 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 Q + G VDF +LLL L P + + Y +RF +LVDEFQDTN Q ++LLA Sbjct: 177 QLSLKAQGSVDFDDLLLLPARLLREHPDLYEKYTKRFRYLLVDEFQDTNTAQLELLKLLA 236 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 G + V VGDDDQ IY WRGA+V NI F FPG + +RLEQNYRS +L AANA+I Sbjct: 237 GRSRNVCAVGDDDQCIYSWRGAEVRNILDFDRLFPGGKEVRLEQNYRSVQTVLDAANAVI 296 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 N R K++WTD G + + N+ +EARFV + I+ G + + A+LYR+N Sbjct: 297 AKNPERKAKQMWTDRTGGTKVKVVTCPNDEEEARFVAHEIQKHMALGISADDIAVLYRTN 356 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 QSR +EE L + ++ Y + GG FF+R+E+KD ++Y ++I N+ D+ + R+VN P+RG Sbjct: 357 GQSRPIEETLREKNIGYEVVGGSEFFDRREVKDVIAYFKVIVNKLDEISLLRIVNVPSRG 416 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IGD T++ + +R +TLW ++ + L A + + F++L++ L Sbjct: 417 IGDVTMERLNVHARGEGVTLWTVMKKATDYEDLPPGAGARVMDFVDLVERYRAAYEHGQL 476 Query: 478 HVQTDRVIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 T +++++ G R +++ ++ ++ + F E L +L Sbjct: 477 ANVTRKLLEEIGFREATRAHATSATAADKKLKGVDGVLNSLENFEKREG--PKASLPTYL 534 Query: 536 SHAALEAGEGQAD--TWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 + +L+ + + + V LMT+H++KGLE+ VF +GMEE + P E LE Sbjct: 535 NRLSLDTRQEEEEVPGANRRVTLMTVHASKGLEYRLVFFIGMEEDLMPHGGMQGEAQNLE 594 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YVG+TRA + L LT A TR GKEV PSRF+ +LP E +E V L A P Sbjct: 595 EERRLCYVGITRAKEVLYLTRAATRVKRGKEVPRTPSRFLEDLPPEVIEVVELDAPRQGP 654 Query: 654 VSHQRMGTPMVENDSGYKL 672 + + + K Sbjct: 655 PTTEEKNFFANLKERFKKP 673 >UniRef50_C2ME74 ATP-dependent DNA helicase PcrA n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2ME74_9PORP Length = 778 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 263/777 (33%), Positives = 400/777 (51%), Gaps = 65/777 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN+ QR AV LV+AGAGSGKTRV+ +++A L+ + +P + A+TFTNKA Sbjct: 4 LTALNEAQRVAVVYNEGPALVIAGAGSGKTRVITYKLAHLVD-QGWNPQRLYALTFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ +++G + +GTFH + R+LR + QD+ I D+ D L++ Sbjct: 63 AGEMRSRVSEMLGEGIAYRLRMGTFHSICGRILRRYAPLLGYSQDYSIYDTSDTKALIRN 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-------PVEQTWQKVYQAYQ 178 IK ++L +K + P + + I+ K+ + P + E K+Y Y Sbjct: 123 CIKELDLSDKSYTPTRVLKRISDAKNMLISPQAYAANQEIRKYDTMNQEGELYKLYSLYT 182 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C + +DF +LL + L + P Q + +L+DE+QDTN Q+ R L Sbjct: 183 QRCKESNSMDFDDLLFLLNVLIRDFPEAHQEIKSGIDFLLIDEYQDTNTSQFELARHLVA 242 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 D ++ VGDD QSIY +RGA++ NI F F GA+ +LEQNYRST +I+S+ANALIE Sbjct: 243 DHNRIFAVGDDAQSIYSFRGARIANILSFKQAFAGAKLFKLEQNYRSTGHIVSSANALIE 302 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSN 357 +N R+ K+++TD +GE + LY + +EA +++ I + L++ ILYR+N Sbjct: 303 HNQQRIPKEVYTDLGEGEKLQLYHYTSSDEEATRLIDIITQRHDEEQIPLSDQTILYRTN 362 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 AQSR EE LL +PY IYGGM F+ R EIKDA++YL+LI N +++ A R + P +G Sbjct: 363 AQSRKFEEVLLSEGIPYVIYGGMAFYARAEIKDAIAYLQLIINPHNELALRRAIAYPRKG 422 Query: 418 IGDRTLDVVRQTSRDR--QLTLWQACRELLQEK---ALAGRAASALQRFMELIDALAQET 472 IGD+T++ V ++ QL+L+ A + L+ + + F+ LID+LA Sbjct: 423 IGDKTIEKVALYAQQHSPQLSLYDALCAAIDSADPVGLSRGVRNKIASFVNLIDSLASAY 482 Query: 473 ADMP-LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL--- 528 L ++++SG+ +E + Q +++NL+E +++ +F + L Sbjct: 483 QHYAKLEEWIAHILRESGIVAELTREDTVESQAKLDNLKEFISSASEFEARYRQDPLNLF 542 Query: 529 -------MPLQAFLSHAALEAGEGQADTWQ-------DAVQLMTLHSAKGLEFPQVFIVG 574 L AF L + Q + Q D +QLMT+H AKGLEFP V+I G Sbjct: 543 AEEPLGTELLSAFAQQIPLLTNQDQDNVEQQSGVALQDRLQLMTIHVAKGLEFPYVYIAG 602 Query: 575 MEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG 634 +EE + PS SLD +EEERRL YVG+TRA + TL+Y R GK PSRFI Sbjct: 603 VEENLLPSSRSLDTAEMIEEERRLLYVGITRAQKLCTLSYTSIRTRNGKTELMIPSRFIA 662 Query: 635 ELPEECV---EEVRLRATVSRPVSHQRMGTPMVEND------------------------ 667 ELP EE T R ++ T + Sbjct: 663 ELPRAHYTLHEEAAPIGTSVRSYANSYQPTTNSQRPTATSPSASSATAQQMLAKSSPVNA 722 Query: 668 ----SGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 GY +G RVRH + G+G I +E S +L + F + ++ Y L+ + Sbjct: 723 LESLDGYHVGDRVRHPRHGDGEIQRIE-SAMGGKLTIHFDDGKTREVLIRYTHLDHI 778 >UniRef50_B9X9R1 UvrD/REP helicase n=1 Tax=bacterium Ellin514 RepID=B9X9R1_9BACT Length = 689 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 231/664 (34%), Positives = 368/664 (55%), Gaps = 33/664 (4%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L +LN +QR A R +L+LAGAG+GKTRV+ RIA ++ +P SI+AVTFTNKA Sbjct: 4 LSTLNPQQRMAAETIRGPVLILAGAGTGKTRVITFRIAHMI-ERGVAPGSILAVTFTNKA 62 Query: 67 AAEMRHRIGQLMG--------TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 A EM+ R+ +L+ + TFH L R+LR H ++F I D + Sbjct: 63 AREMQERVNKLIPRPSKKSRDEKPERPTLCTFHSLCVRILRQHIEKLGYKKNFVIYDQTE 122 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAY 177 QL +K+++ ++ ++ P + ++ K+ G ++ + + + + Y Sbjct: 123 QLGAIKKILSQVSAKGEKTDPAAILAMLSKYKNGG---SQAAAFADESIKAMAEHIRTRY 179 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 + A VDF +L+L L+ P L+ R RF I+VDE+QDTN Q++ + L Sbjct: 180 ESALRACNAVDFDDLILLTLRLFEEHPDALEACRNRFRYIMVDEYQDTNASQFSLVHYLT 239 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + +VGDDDQSIYGWRGA++ N+ FP + ++LEQNYRST+ IL+AANA+I Sbjct: 240 KEHRNLCVVGDDDQSIYGWRGAEISNLLDMEKHFPEVKVVKLEQNYRSTNVILTAANAVI 299 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRS 356 +NN R GK+LW+D G I+L+ ++ EA+ +V +I+ + ++ AIL+R+ Sbjct: 300 KNNLRRRGKQLWSDKGQGTKITLHTFESDEAEAKAIVEQIEFKRLASRIPWSQQAILFRT 359 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QSR LE AL Q + Y + GG +F+R+EIKD L+YL+L N NDD + R+ N P R Sbjct: 360 NIQSRALETALRQGQVRYHLIGGQSYFDRREIKDFLAYLKLFINPNDDISLLRIANVPAR 419 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ---ETA 473 G+ D T++ + S +R+ ++++A + + + R +++ F++ ++ Sbjct: 420 GLSDVTMERLLAASHERKCSVYEAMKNPMVTTSFLTRTRESIEEFVKFVEETRAPLSSGQ 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQ------------F 519 M L V ++ + ++G + + E R+ NL++L + Sbjct: 480 SMSLKVWAEKFLTETGYLEELRRSEKTAEAADNRVRNLKDLTGILDEDNHTIVAGPDGTH 539 Query: 520 SYNEEDEDLMPLQAFLSHAALEAG-EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEG 578 ++ LQ FL L++ + + + +AV L+T+HS KGLEFP V+IVG+E+G Sbjct: 540 QPVLTNDPADRLQTFLEELTLDSERKEEKEAQGEAVTLITMHSCKGLEFPHVYIVGLEDG 599 Query: 579 MFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 + P S EG L+EERRL YV +TRAMQ LT++Y R+ YG+ + PS F+ ELPE Sbjct: 600 LLPHSRSKVEGT-LDEERRLFYVAITRAMQTLTISYCTGRKKYGQVMPCHPSGFLKELPE 658 Query: 639 ECVE 642 E VE Sbjct: 659 ELVE 662 >UniRef50_D0LIZ3 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LIZ3_HALO1 Length = 688 Score = 766 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 255/675 (37%), Positives = 369/675 (54%), Gaps = 28/675 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L LN QREAV +LVLAGAGSGKTRV+ +RI L+ P +I A+ Sbjct: 4 MD----LAKLNTPQREAVLHGSGPVLVLAGAGSGKTRVITYRIVRLLRS-GIPPQAIAAL 58 Query: 61 TFTNKAAAEMRHRIGQLMGTS--QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFTN+AA EMR R+ L+G + +GTFH L R+LR+ H P+ F I D+ D Sbjct: 59 TFTNRAAEEMRERVAALLGDRKTASMLTMGTFHSLGLRILRSEHEAMGYPRGFVIYDTSD 118 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN-PVEQTWQKVYQAY 177 QL +++ L++ ++ +++ R + I+ K+ + P G+ ++ +VY Y Sbjct: 119 QLGVVRELLRGIDAG-RRFDVRAILTRISLAKNAFVFPEEYVPNGDDEYDEITAEVYPRY 177 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 QEA VDF +LL ++ + + ++E+F ++VDE+QDTN Q +++ L Sbjct: 178 QEALRAYAAVDFDDLLTATVRMFDQRDDVRARWQEKFRFVMVDEYQDTNRAQLKFVKTLV 237 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + + +VGDDDQSIY WRGA NI F FPGA I+LEQNYRST IL AANA+I Sbjct: 238 AEHENLCVVGDDDQSIYSWRGADPTNILHFDRMFPGARVIKLEQNYRSTPTILRAANAVI 297 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRS 356 NN R GK LW+D ADG I A + EARFV I + + A+LYRS Sbjct: 298 ANNVNRHGKNLWSDIADGAKIVHASATDTESEARFVAREIGDIVGTDNLRYRDVAVLYRS 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N QSR++EE+L AS+PY +YGG +F+ER+E+KD ++YLRL N+ D+ A RV+N P R Sbjct: 358 NIQSRLIEESLRSASIPYVMYGGQQFYERKEVKDLIAYLRLALNQRDEIALRRVINYPAR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACR---ELLQEKALAGRAASALQRFMELIDALAQETA 473 GIG TL V +R + ++W+ ++ + + A++ F+ +I+ Sbjct: 418 GIGATTLKRVEDHARASRTSMWRILEGASQMAESDKMRPSTVQAIENFVAIIERTRASLD 477 Query: 474 DMP-LHVQTDRVIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + T R+I + L Q RI+N+E L+ + + + E+ L Sbjct: 478 GGARIIDVTRRLIDEIQLYDDLRNASPSAAAAQRRIDNVESLLRSLER--HQEKRPGLGA 535 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMS----- 585 L +L +L + + V L TLH AKGLEFP VF++G+EE + P + Sbjct: 536 LAEYLRRLSLAVESEAGEDPGNKVVLTTLHGAKGLEFPIVFMIGLEEEILPHARTLKPQA 595 Query: 586 -----LDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 LD + EERRLAYVG+TRA +KL LT + R GK + PSRF+ E+P E Sbjct: 596 TDVMDLDHVTDVSEERRLAYVGITRAQRKLYLTRTQVRVSRGKNLPRTPSRFLQEIPAEL 655 Query: 641 VEEVRLRATVSRPVS 655 +EE ++A PVS Sbjct: 656 LEERDIQAEERAPVS 670 >UniRef50_B4CU41 UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT Length = 678 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 239/677 (35%), Positives = 356/677 (52%), Gaps = 25/677 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L D LN +Q +AV LL+LAGAG+GKTRV+ R+A+L+ + P I+AV Sbjct: 1 MSGFSLFD-LNPEQEQAVRTTEGPLLILAGAGTGKTRVITMRVAFLI-SQGVDPSHILAV 58 Query: 61 TFTNKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+ +++ + + + TFH L R+LR ++F I D DQ Sbjct: 59 TFTNKAADEMRERLAKMIEPSQAKKVTMSTFHALCVRILRQDIEKLGWKKNFSIYDEGDQ 118 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 + L+K++I +++ P A I+ K+ G R + + V+ YQ Sbjct: 119 MGLIKKIITRTAAKDEKLDPNVAKNLISKAKNNGWR----EVSPGDEKTLAGAVFARYQA 174 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA-- 237 VDF +LLL A ++ + + RF ++VDEFQDTN +Q + +LA Sbjct: 175 ELKTLNAVDFDDLLLLAVKVLSEHADVRDRWHRRFRYLMVDEFQDTNRLQLELVSMLAKP 234 Query: 238 ----GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 G V +VGDDDQSIYGWRGA+V NI F FP ++LEQNYRST+ IL+ A Sbjct: 235 AEGTGGRPNVAVVGDDDQSIYGWRGAEVSNILEFEAHFPDPVVVKLEQNYRSTNAILNTA 294 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAI 352 N LI+NN R KKLW+ DG+ + + ++ EA F+ N I + E AI Sbjct: 295 NFLIKNNPRRRPKKLWSSAGDGDKVRIVGMSDDRQEAEFIANEIAQRSVTESAPHEEFAI 354 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 L+R NAQSR+LE L Q ++PYRI GG FF+R+E+KD L+Y + N +DD + R++N Sbjct: 355 LFRMNAQSRLLETNLRQLNIPYRIIGGKSFFDRREVKDLLAYANCLVNTDDDVSLLRIIN 414 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP RGI T++ S ++ +++ L R +L RF+E++D + Sbjct: 415 TPARGISSNTVEKATDFSAKQKCSVFDVLTNEAFRGTLTKRTVESLDRFVEMLDRFETKL 474 Query: 473 AD--MPLHVQTDRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDL 528 ++K++G ++ + ++ +R NL +L+ + + + Sbjct: 475 NTPLSDHAAVLREMMKETGYLDELKRTCKTPQEALSRETNLMDLLKSFEDYQGRSSEG-- 532 Query: 529 MPLQAFLSHAAL--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L+ FL +L E E D V L+TLH+AKGLE+P V+++G+EEG+ P S Sbjct: 533 --LRGFLDEMSLRQEREEDDDDARGTGVTLITLHAAKGLEYPHVYLIGLEEGLLPHDRSK 590 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 EG ++EERRL YVG+TRA + L L++ R YG + PS FI ELP E + Sbjct: 591 LEGT-VDEERRLLYVGITRARRTLALSWCRHRIRYGSPMPCTPSSFIKELPPEWIIHRDA 649 Query: 647 RATVSRPVSHQRMGTPM 663 + PVS + Sbjct: 650 TQILQAPVSEAAAKSKF 666 >UniRef50_Q68WT1 DNA helicase II n=17 Tax=Rickettsieae RepID=UVRD_RICTY Length = 658 Score = 764 bits (1973), Expect = 0.0, Method: Composition-based stats. Identities = 260/664 (39%), Positives = 399/664 (60%), Gaps = 20/664 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + +LN +Q++A LL+LAGAG+GKT+VL RIA ++ P++I+AV Sbjct: 5 MQNQNFMHTLNSEQKKAALHTEGPLLLLAGAGTGKTKVLTSRIANIIQQNLALPHNILAV 64 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQILDSED 118 TFTNKAA EM R+ L+ + G+ +GTFH +A ++LR + L F I+ +D Sbjct: 65 TFTNKAAKEMSERVHNLI--NCYGVNIGTFHSMAAKILRDQIENLNLGLNNKFTIISHDD 122 Query: 119 QLRLLKRLIK-AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGN--PVEQTWQKVYQ 175 QL L+K ++K ++D K++ P+ I+ KD+GL P + + P+++ + +Y+ Sbjct: 123 QLTLVKDIVKLKKDIDTKKYTPKLIHIIISRWKDQGLLPSKLSASDTNLPLQRVAKLIYE 182 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 YQ+ + ++DF +LLL +EL++ P IL++Y+E++ IL+DE+QDTN QY W R+ Sbjct: 183 EYQKNLLISNVLDFGDLLLYNNELFIKNPEILKYYQEKYRYILIDEYQDTNIAQYLWARM 242 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LA + VGDDDQSIYGWRGA+V NI RF DF GA I+LEQNYRST IL+AA+ Sbjct: 243 LASLYRNICCVGDDDQSIYGWRGAEVGNILRFEKDFAGATIIKLEQNYRSTLPILAAASN 302 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILY 354 +I NN R K LWTD A GE I + ++ +EAR++ I ++ AIL Sbjct: 303 VINNNKNRHSKTLWTDSASGEKIKIISCLSDKEEARYIACEIDKLVREERYHAGNIAILV 362 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R+ Q+R EEA + ++MPY+I GG+RF+ER EI+D L+Y+R+ N+ND+ A ER++N P Sbjct: 363 RAGFQTRSFEEAFINSAMPYKIIGGLRFYERMEIRDVLAYIRISLNQNDNLALERIINVP 422 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD 474 R IG +L+ +R + +R ++ + A +E+L+ ++ +L+ + ID ++ Sbjct: 423 KRAIGAASLNKIRSYALERNISNFVAIKEILETGIFKAKSYESLKDLLTKIDNWYEKFIT 482 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 ++ DSG +M ++EK E+ RIEN+ E++ A +F + F Sbjct: 483 DTPINVVKTILDDSGYLSMLQEEKTEEAFGRIENINEMLRAIAEF---------NDIHDF 533 Query: 535 LSHAALEAGEGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-- 591 + H++L +T V +MTLH+AKGLEF VF+ G EEG+FPSQ SLDE G Sbjct: 534 IEHSSLVMENEVLETNYGGSVTIMTLHAAKGLEFDVVFLPGWEEGVFPSQRSLDEDGEKG 593 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 LEEERR+AYVG+TRA + L +T+AE+R+++ + V+ PSRFI E+P+E + Sbjct: 594 LEEERRIAYVGITRAKKDLYITHAESRKIFYEIVHSCPSRFINEIPDEITIRTSSMKKYN 653 Query: 652 RPVS 655 Sbjct: 654 SFYK 657 >UniRef50_Q2GE51 Helicase, UvrD/Rep family n=2 Tax=Neorickettsia RepID=Q2GE51_NEOSM Length = 630 Score = 763 bits (1972), Expect = 0.0, Method: Composition-based stats. Identities = 252/634 (39%), Positives = 376/634 (59%), Gaps = 21/634 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 +LND+QR AV +L+LAGAG+GKT+ LVHRIA L+ P IMAVTF NKAA Sbjct: 15 NLNDEQRLAVETVNGPVLILAGAGTGKTKTLVHRIAHLIRSGYAHPNQIMAVTFANKAAN 74 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ +++G + W+GTFH A ++LR DF ILD +DQ+R+L+++ + Sbjct: 75 EMIQRVNEIVGEMKFH-WIGTFHAAAAKILRIEAEKLGFKPDFTILDVDDQVRMLQKVAQ 133 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ---SYGNPVEQTWQKVYQAYQEACDRAG 185 ++ + ++ + I++ KD+ P ++ + E+ VY YQ+ Sbjct: 134 EKKIEADKALLKKYLSVISAWKDKAFTPSRVRFNNAANTWFEKQALSVYDTYQKKLKENN 193 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DF +LL+ L+ L+ Y+E+F I+VDE+QDTN QY W+RLLA + Sbjct: 194 SMDFGDLLMHNVTLFNKDAETLEKYKEKFRYIMVDEYQDTNLCQYLWLRLLAQKHSNICC 253 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIYGWRGA+V NI RF DF GA+ I+LEQNYRST+ IL+AA+ +I+NN RL Sbjct: 254 VGDDDQSIYGWRGAEVGNILRFAKDFEGAKVIKLEQNYRSTNKILTAAHNIIKNNQSRLT 313 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 KKLWT GE I ++ + EAR ++ IK + ++ AIL R+ Q+R EE Sbjct: 314 KKLWTAYPGGEEIQIFTYMDSEQEARAIIRMIKE-RKLLCRYSDTAILVRAGFQTRAFEE 372 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 A + ++PYR+ GG++F+ER+EI+D ++YLRL+ N ND+ AFER++NTP RG+G +L+ Sbjct: 373 AAIHENVPYRVVGGLKFYERKEIRDIIAYLRLVVNPNDNLAFERIINTPKRGLGQASLNK 432 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + S + ++++A R+L + + L +AL F++ + +E+ + LH ++ Sbjct: 433 IYNYSLEEGCSMFEAVRKLEENEKLKS---TALLTFVKQVRKWQEESLNHSLHDLLKKIT 489 Query: 486 KDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEG 545 +SG + + E+ +TRIEN++EL ++F FL H +L Sbjct: 490 LESGYISALK----EQDETRIENVDELFRVIQEFDDAT---------DFLQHVSLLTESD 536 Query: 546 QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTR 605 DAV +MTLH++KGLEF QVF+ G E+G FP SL ++EEERRLAYVG+TR Sbjct: 537 AQINNSDAVNMMTLHASKGLEFEQVFLPGWEDGTFPHVRSLCSTEQIEEERRLAYVGITR 596 Query: 606 AMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 A + LT+T A R + SRF+ EL E+ Sbjct: 597 AKRFLTITSAHRRLIRNSWQNTVKSRFMLELAEK 630 >UniRef50_Q5PB91 DNA helicase II n=20 Tax=Rickettsiales RepID=Q5PB91_ANAMM Length = 671 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 249/642 (38%), Positives = 370/642 (57%), Gaps = 17/642 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 L SLN++Q+EAV +L+LAGAG+GKTR + R+ +++ P I+AVTFT Sbjct: 31 ESFLLSLNEEQKEAVFCVDGPVLILAGAGTGKTRTITSRMGYIIKRGLAFPSQILAVTFT 90 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM R+ +++ G+W+GTFH +A R+LR++ L +DF ++ +DQL+L+ Sbjct: 91 NKAAREMLVRVSEIV--DTTGIWLGTFHAIAARILRSNAERVGLRRDFTVIGPDDQLQLI 148 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACD 182 K ++ ++ M I K++GL P + + + VY YQE Sbjct: 149 KAIVNDTQPGHPAEECKKMMHAIQRWKEKGLLPAGVTDTELQKCPNIVRDVYYEYQERLK 208 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 DF +LLL ++ +L HY+E+F ++VDE+QD N +QY W+RL+ Sbjct: 209 ALNCADFGDLLLYNVSMFSAHADVLSHYQEQFKYVMVDEYQDINTVQYLWLRLIVQKRKN 268 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDDDQSIY WRGA+V NI RF +DFP A+ +RLE NYRSTSNIL AA+A+I NN Sbjct: 269 ICCVGDDDQSIYSWRGAEVGNILRFADDFPEAKIVRLECNYRSTSNILCAASAIINNNKS 328 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RLGKKLWT G+ + L ++ EA+F+ IK + E AIL R+ Q+RV Sbjct: 329 RLGKKLWTTNHAGQKVGLMKFWDGRMEAQFISEYIKG--SSEYRFDETAILVRAGFQTRV 386 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 EE L++ +PY+I G +F++RQEIKD ++YLR++ N +D AFER+VN P R +G T Sbjct: 387 FEEYLVRCGIPYKIIGSTKFYDRQEIKDLVAYLRVVTNPKNDIAFERIVNKPKRQLGAST 446 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 + +R +RD +L+L ++ +++ L R ++ LQ ++ + L Sbjct: 447 VAKMRAYARDNRLSLLESGESMIRFGLLPERTSNTLQNLLDKFKCWRETLDTTSLTTVMQ 506 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + + SG M +++G+ G ++IEN+ EL A F + FL H +L Sbjct: 507 AIAEGSGYMNML-KDEGDAGASKIENIRELFAAVGNFENATK---------FLEHISLVT 556 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLEEERRLAY 600 + + V LMTLH+AKGLEFP VF+ G EEG+FP + S+ + G LEEERRLAY Sbjct: 557 EVDSPEQANNHVYLMTLHAAKGLEFPLVFLPGWEEGVFPHEKSIHDSTGNALEEERRLAY 616 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 VG+TRA ++L ++ R + + SRFI ELP E V+ Sbjct: 617 VGMTRAREQLFISCVAVREVNNWRQPMKISRFIKELPAEHVQ 658 >UniRef50_B2UQR8 UvrD/REP helicase n=2 Tax=Verrucomicrobiaceae RepID=B2UQR8_AKKM8 Length = 668 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 237/672 (35%), Positives = 364/672 (54%), Gaps = 20/672 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M S+ ++SLN QR+AV + +L+LAGAG+GKTR + RIA ++ SP SI+AV Sbjct: 1 MAKSFSMESLNAAQRKAVQTLQGPVLILAGAGTGKTRTVTCRIAHMVD-RGISPKSILAV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAA EMR R+GQ++ + V TFH L R+LR +F I +Q Sbjct: 60 TFTNKAALEMRERVGQMVERKAARQIMVSTFHSLCVRILREDIGRLGYKTNFTIYSGSEQ 119 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L++RLI ++ P+ + ++ K+ GL I+ + + +YQ Sbjct: 120 SGLIRRLIVRHGGITEKITPKDVLSSMSRMKNSGLGLDSIE------DNLTANIAASYQR 173 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 VDF +LL+ A +L + + +++RF I VDEFQDTN++Q + + L G Sbjct: 174 ELQAQNSVDFDDLLILADKLLKEHRDVREAWQQRFRYITVDEFQDTNSLQMSLLGHLVGP 233 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 V +VGDDDQSIYGWRGAQ+ NI F FP I+LE+NYR T+ IL ANALI + Sbjct: 234 EHNVCVVGDDDQSIYGWRGAQISNILEFERFFPNPSVIKLEENYRCTAPILDTANALIRH 293 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N GR K L GE + L + +EA F++ I+ + G + AIL+R+N Sbjct: 294 NLGRRDKTLRAHKGGGEAVRLISMPGDAEEAEFIITDIENVRRQEGRPWEDFAILFRANT 353 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR++E+ L + +PYR+ G FF+R+E+KD +SYL I N D R++NTP RGI Sbjct: 354 QSRIIEQTLREHKIPYRMVGAQSFFDRKEVKDLISYLATIENPQADEYLLRILNTPPRGI 413 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 + T +V SR+ ++W A ++ AL+ RA +++Q F ELI D Sbjct: 414 SELTSHLVIDWSREHGNSVWAALQDEEFLAALSTRARNSVQAFNELIAKYIDLFQDKETD 473 Query: 479 --VQTDRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 +++I+++G + + + Q R+ ++ ++ + R F + L+ + Sbjct: 474 FGDILEQLIEETGFSEYVTRLCKTEAEIQKRLVSIGDVKASLRNF-----WQPGKTLRDY 528 Query: 535 LSHAALE-AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 L+ L+ + V L+T+H+AKGLEFP V++VG+EEG+ P + SL++ G + Sbjct: 529 LAQVTLDKEDNDDDVENKPGVCLITMHAAKGLEFPVVYLVGLEEGILPHKRSLED-GNCD 587 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YVG+TRA +KL LTY TR YG + + S F+ E+P +E + ++ Sbjct: 588 EERRLLYVGITRAQEKLMLTYCATRLRYGDRMPCQRSSFLSEIPPHLMEYYKWEDLMNAE 647 Query: 654 VSHQRMGTPMVE 665 + + G Sbjct: 648 ATEEESGNFFDS 659 >UniRef50_C9M511 ATP-dependent DNA helicase PcrA n=2 Tax=Synergistaceae RepID=C9M511_9BACT Length = 673 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 242/669 (36%), Positives = 347/669 (51%), Gaps = 19/669 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD S L LND Q+EAV L+LAGAGSGKTRVL +IAWL+ + P+ I+AV Sbjct: 19 MDESAWLKGLNDAQKEAVVYLGKRQLILAGAGSGKTRVLTRKIAWLIDAQRVKPWRILAV 78 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLL---RAHHMDANLPQDFQILDSE 117 TFTNKAA EM R+ +G + G+ V TFH ++L RA P + D Sbjct: 79 TFTNKAAREMLDRLTASLGENLAGLQVRTFHSFGLQMLFRSRAQLEQLGYPPQCVVYDRA 138 Query: 118 DQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAY 177 D L K +++A+NLD +Q+ P + I+ K+ G + +P++ +Y+ Y Sbjct: 139 DSLSAAKAVLEALNLDPEQYTPAWVLETISKAKNSGAGLGAFDN--SPMKSIVGPLYERY 196 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 G DF +L+ EL P + + ++ +LVDE+QD N QY +RLLA Sbjct: 197 DGLLKSRGAWDFDDLIALPLELLTRFPEVKEREQKALDWVLVDEYQDVNAAQYRLMRLLA 256 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + VGD DQSIYGWRGA + I F DFPGA + LEQNYRST IL AAN+LI Sbjct: 257 SGGANLTAVGDPDQSIYGWRGADMSMIMNFERDFPGASVMLLEQNYRSTGGILEAANSLI 316 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 +N R K LWTD G ++ DEA + I+ + +G ++ AILYR N Sbjct: 317 SHNFDRREKNLWTDREQGAKPQVWNCPTSDDEAELITTEIERFLSSGYRASDVAILYRMN 376 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 A SR +EE+LL ++PY++ G FF+R+E++D LSYLRL N D A+ +RV N PTRG Sbjct: 377 ALSRRIEESLLSHNLPYQVVRGQGFFDRREVRDVLSYLRLALNPYDRASLDRVGNLPTRG 436 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--LAGRAASALQRFMELIDALAQETADM 475 +G R+LD + + + + L+G+ A+ ++ + + D Sbjct: 437 LGPRSLDKLDAYLLSHRTADPADVWAAVAQTGAELSGQGAAGARQLAGAMGEILGCGGD- 495 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 L D ++ G T+ ++ + R +N+ E+++ D L L Sbjct: 496 -LKRALDVILMRIGYETVLQKIDPAGWEDRYDNVMEILSLA---------GDGDSLPELL 545 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 + AAL D+ + L TLH AKGLEFP VF++G+EEG+FP S D+ +EEE Sbjct: 546 AQAALYTDAD-RDSGGQGINLSTLHGAKGLEFPLVFMIGLEEGIFPHSRSSDDPAEIEEE 604 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRL YVG+TRA ++L LT RRL+G RPSRF+ E+ + +E Sbjct: 605 RRLCYVGMTRAQERLILTRVRERRLFGSTTTQRPSRFLAEIAPDLRDEFDFGEVRPSVGY 664 Query: 656 HQRMGTPMV 664 + Sbjct: 665 RFNRPSRRW 673 >UniRef50_A7KV33 PcrA helicase n=1 Tax=Bacillus phage 0305phi8-36 RepID=A7KV33_9CAUD Length = 657 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 236/645 (36%), Positives = 383/645 (59%), Gaps = 13/645 (2%) Query: 6 LLDSLNDKQREAV-AAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 LLD LN Q+EAV ++ LV+AGAGSGKTRVL R+ +++ P I+ VTFTN Sbjct: 18 LLDGLNPAQKEAVVKTVKNPSLVIAGAGSGKTRVLQKRVGYILEN-GIDPRRILTVTFTN 76 Query: 65 KAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RIG +G + +GTFH LA R L ++ +A L +++ I DSED +++ Sbjct: 77 KAATEMKERIGNEVGEARAKKIMIGTFHSLAVRWLHQYYSEAGLKKNWTIFDSEDTNKVI 136 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 K L+K+ N+D+ + I++ K++ + P + P ++++ ++Y+ YQ+ R Sbjct: 137 KELLKSNNMDDSKQNVYATQSRISNLKNDMILPKDFRKQMEPQDKSFARIYERYQDRMAR 196 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +L+++ L + + + ++ R+ I+ DE+QDTN QY I+ + GD + Sbjct: 197 NNAVDFDDLIMKMVILLESNTEVRRKFQRRYKYIMCDEYQDTNECQYRMIKNIVGDKNNI 256 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDD Q IYGWRGA +E I F D+PG + ++LEQNYRST+ I++A NA++++N + Sbjct: 257 FVVGDDYQGIYGWRGANIEKILNFQKDYPGTKVVKLEQNYRSTNTIVTAGNAIMKHNTKQ 316 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRV 362 + K +TD GE I Y A ++ EARF+ I+ +G + A+LYR+N QSR+ Sbjct: 317 MNKTCFTDKGMGEKIRKYEAPDDEQEARFIAQEIQNLCTFDGYKYEDIALLYRTNVQSRL 376 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE+ ++ ++PY + G F+ER+EIKD +S+++L N ++D A +R++N G+G T Sbjct: 377 LEDQFIRHNIPYNMVSGFSFYERKEIKDIMSWMQLAVNPDNDIACDRILNM-QAGVGKTT 435 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA---DMPLHV 479 + ++ + ++ ++++ + A A A L + ++AL + D P+ Sbjct: 436 IKQIKDKANEKNKSIYEVVEYFNPKTAKAKAAFVGLTDTVARLNALYEAGKSVSDQPITD 495 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + + K + ++ E+ RI+N++EL + + +D LQ FL A Sbjct: 496 MLELIFKYTQYIEKLQETGKEEDFRRIDNIKELTKIAKGYEQENKDP---HLQDFLDQIA 552 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L++ + + QD VQLMTLH++KGLE+P VF++GMEEG+FP SL + +LEEERRLA Sbjct: 553 LQSQQDKVV-NQDKVQLMTLHTSKGLEYPVVFMIGMEEGLFPHSRSLSDTVQLEEERRLA 611 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVY-HRPSRFIGELPEECVEE 643 YVG+TRA + L T+AE R Y + PSRF+ ELP+E ++E Sbjct: 612 YVGITRAQEILYFTHAERRMDYNRTYNWQTPSRFMEELPDELIQE 656 >UniRef50_A6DKH4 UvrD/REP helicase n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DKH4_9BACT Length = 674 Score = 758 bits (1958), Expect = 0.0, Method: Composition-based stats. Identities = 237/673 (35%), Positives = 373/673 (55%), Gaps = 15/673 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S LLD LND+QR+AV LL+LAGAG+GKT V+ RIA+++ P I+AVTF Sbjct: 1 MSVLLDRLNDEQRQAVTTTEKPLLILAGAGTGKTMVVTSRIAFIVQSGRAEPGEILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R G+L+G +WV TFH ++LR + A DF + + DQ+ Sbjct: 61 TNKAANEMKERAGRLIGQKAVKDLWVSTFHSFGMKILRKYAYQAGYAPDFTLAEYGDQVG 120 Query: 122 LLKRLIKAMNLDEKQW--PPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 L+K+ + + L E P+ + I+ K + P ++ +P EQ +Y+ YQE Sbjct: 121 LIKQGLNELGLVEDGMSQDPKAILSLISMAKAKNQVPEDLEESSDPWEQRIGGIYRYYQE 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 ++DF +LL+ L + Q +++F ++VDEFQDTN+IQ + L Sbjct: 181 YLHALNILDFDDLLMLTVRLLQKDEKVRQLLQDKFKYVMVDEFQDTNHIQMELLHALLPK 240 Query: 240 T-GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIY WRGA+V NI F FPG + I+LEQNYRS + IL+AAN +I Sbjct: 241 HEPNICVVGDDDQSIYSWRGAEVANILAFPQIFPGGKLIKLEQNYRSNNVILNAANKVIS 300 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSN 357 N+ R K LW+ GE + + +E EA+ + + I + +CAILYRSN Sbjct: 301 INSQRHVKNLWSAQEGGEKLKVVACGSEEREAKAIADTILNKVNGRQNTYGDCAILYRSN 360 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 QSR LE+A+ + +PY+I G F+ER+E++DAL++L++I N DD +F RV++ P RG Sbjct: 361 HQSRALEDAMRRGRIPYKIIGDTSFYERKEVRDALAFLKIIHNPRDDFSFLRVLDVPPRG 420 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM-P 476 IG RT+ +R+ + + + +++ R + GR++ AL +F ++ Q+ + P Sbjct: 421 IGPRTIKTLREKAVENKTSVYDLLRNPQFMENF-GRSSDALMKFNNRVEEFRQKFQEKVP 479 Query: 477 LHVQTDRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAF 534 L ++ + G + E + R +N+ E++ +ED+ +PLQ + Sbjct: 480 LAGLVEQYFEGVGYIEGLGRMYKPREDAEKRYQNVLEIIHTIEG--REKEDKRCIPLQEY 537 Query: 535 LSHAALEAG---EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 L +L + D +AV L+T+H++KGLEFP VF+ GME+ +FP + S Sbjct: 538 LESVSLMEEYRRRQEKDEDPNAVMLLTVHASKGLEFPSVFVTGMEKNLFPHEKSAGLKA- 596 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVS 651 L EERRL YV +TRA L LT+++ R+ + PS+F+GELP++ V+ + + Sbjct: 597 LAEERRLFYVALTRAKSDLILTWSKMRKAGRRMSQRMPSQFLGELPKDLVDHCLPQDLLK 656 Query: 652 RPVSHQRMGTPMV 664 + + + Sbjct: 657 KLSREEFLEQMKN 669 >UniRef50_A6VEA1 ATP-dependent DNA helicase Rep n=102 Tax=Proteobacteria RepID=A6VEA1_PSEA7 Length = 706 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 252/645 (39%), Positives = 358/645 (55%), Gaps = 12/645 (1%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q+EAV LLVLAGAGSGKT V+ +IA+L+ I+AVTFTNKA Sbjct: 38 MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAYLVQQCGIRAQYIVAVTFTNKA 97 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+G L+ G G+ V TFH L ++R H F I D D LL Sbjct: 98 AREMKERVGSLLRGGEGRGLTVSTFHNLGLNIIRKEHERLGYKPGFSIFDESDIKALLTD 157 Query: 126 LI-KAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDR 183 ++ K + D+ + YI + K++ + P ++ NP EQT VY YQ Sbjct: 158 IMQKEYSGDDG---VDEIKNYIGAWKNDLILPEEALEKARNPREQTAAIVYLHYQRTLRA 214 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +L+L+ +L+ P ILQ ++ R +LVDE+QDTN QY ++LL D + Sbjct: 215 YNAVDFDDLILQPVKLFQEHPDILQKWQNRVRYMLVDEYQDTNASQYLLVKLLVKDRAQF 274 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRGA+ EN+ + DFP + + LEQNYRSTS IL AN LI NN Sbjct: 275 TVVGDDDQSIYAWRGARPENLMQLKEDFPSLKVVMLEQNYRSTSRILKCANVLIANNPHV 334 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRV 362 K+LW++ G+PI + NE EA + I T +E AILYR N Q+++ Sbjct: 335 FEKQLWSEMGHGDPIRVIRCRNEDAEAERIAMEILTLHLRTERPYSEFAILYRGNHQAKL 394 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E L +PYR+ GG FF RQE+KD +SY RL+ N +DD AF RV+N P R IG T Sbjct: 395 MELKLQHHQIPYRLSGGTSFFGRQEVKDLMSYFRLLVNPDDDNAFLRVINVPRREIGSAT 454 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L+ + + R ++++ AC E+ + L R LQRF +D + ++ A+ Sbjct: 455 LEKLGNYATQRNISMYAACDEMGLAEHLDSRFHERLQRFKRWMDGIRRQCAENEPIAVLR 514 Query: 483 RVIKDSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDLMPLQAF--LSHA 538 ++ D Q + R+ N+ L+ A + +E+ D+ QA L Sbjct: 515 SMVMDIDYENWLRQNASSDKVAEFRMSNVWFLIEALKNTLERDEEGDMTIEQAIAKLVLR 574 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 + + + + + VQ+MTLH++KGLEFP VFI+GMEE + P + S+ E +EEERRL Sbjct: 575 DMLERQQEEEEGAEGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSI-EADTVEEERRL 633 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 AYVG+TRA Q L +T+A R+ YG+ + PSRF+ ELP E +E Sbjct: 634 AYVGITRARQNLAMTFAAKRKQYGEIIDCSPSRFLDELPPEDLEW 678 >UniRef50_Q21PD1 ATP-dependent DNA helicase Rep n=15 Tax=Gammaproteobacteria RepID=Q21PD1_SACD2 Length = 672 Score = 753 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 245/665 (36%), Positives = 354/665 (53%), Gaps = 12/665 (1%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + +LN +Q+EAV LVLAGAGSGKT V+ +IA+++ I AVTFTNKA Sbjct: 1 MTTLNPRQKEAVHYIDGPSLVLAGAGSGKTSVITRKIAYMIQECGIPARHIAAVTFTNKA 60 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ +L+ G++ G+ V TFH L ++R H F I D ED L+K Sbjct: 61 AREMKERVTKLVKGSAARGLTVSTFHNLGLNIIRREHKTLGFKSGFTIFDQEDARGLIKE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRA 184 ++ I++ K+ + P + + EQTW V++ Y +A Sbjct: 121 IMLKDGDTNTDM-IDLVQSQISNWKNGLIEPDEALSKAQSEGEQTWALVFERYNKALKAY 179 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ +L+ P +L +++R +LVDE+QDTN+ QY ++ L GD G + Sbjct: 180 NAVDFDDLIRLPSKLFSEHPEVLNRWQQRIRYLLVDEYQDTNSSQYKVVQQLIGDRGTLT 239 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIY WRGA+ EN+ DFP I+LEQNYRST+ IL AAN LI NN Sbjct: 240 VVGDDDQSIYAWRGARPENMSLLKVDFPSLHVIKLEQNYRSTARILKAANVLIANNPHEF 299 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVL 363 K LW+D GE I + E EA V I + A+LYR N Q+R++ Sbjct: 300 DKTLWSDLGMGETIRVIKCPTEDAEAERVATEILTQRLRRQCKFKDFAVLYRGNHQARLM 359 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E L +PY I GG FF R EIKD + YLRLIAN DD AF RVVNTP R IG TL Sbjct: 360 ELKLQHHQIPYNISGGTSFFARAEIKDIMGYLRLIANPADDNAFLRVVNTPRRQIGTGTL 419 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + S +R ++LW AC E+ + + + +++F ++++ + Sbjct: 420 EALGRYSTERDISLWAACDEMGLQALIPKQGLERIRKFSGWLNSVRSNCHNGDPVQAIRE 479 Query: 484 VIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA-- 539 +I D Q + + R EN+ LV + + +E+ED + + + Sbjct: 480 MIDDIDYEGWLHQNASSPKVAEKRFENVNILVESIKNSLERDENEDADGEERINTAISKL 539 Query: 540 ---LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 + + D VQLMTLH++KGLEFP VF++G+EE + P + S++E +EEER Sbjct: 540 LLQDMLERQEEEDETDRVQLMTLHASKGLEFPHVFLLGLEEEILPHRNSIEE-DNIEEER 598 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH 656 RLAYVG+TRA + LT+T A TR+ +G++ PSRF+ ELP E VE + Sbjct: 599 RLAYVGITRAQRTLTMTLAGTRKQFGEKQTTTPSRFLDELPPEDVEREGFSEATPEQIEK 658 Query: 657 QRMGT 661 + T Sbjct: 659 KGKET 663 >UniRef50_B5YF03 ATP-dependent DNA helicase PcrA n=2 Tax=Dictyoglomus RepID=B5YF03_DICT6 Length = 625 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 247/634 (38%), Positives = 360/634 (56%), Gaps = 20/634 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L LN +Q EAV +L+LAGAGSGKTRV+ ++IA+L+ P +I+A+TFTN Sbjct: 2 DFLKELNKEQLEAVLEIERPVLILAGAGSGKTRVITYKIAYLIKNNIAKPENIVALTFTN 61 Query: 65 KAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RI ++G +W GTFHG LL+ +L F I D DQ L+ Sbjct: 62 KAAEEMKKRINNMLGAKDADKVWAGTFHGFGLYLLKNFGKYWSLSPYFVIYDENDQEDLI 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACD 182 K ++K +N K + R I+ KD+ + P S N ++ +VY+ Y++ Sbjct: 122 KDILKDLN-RAKDYNARDIKEKISRLKDQLITPQEFSSLISNSFDEIVLEVYKRYEKELR 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 R +DFA+LLL + L KP I +++ +LVDE+QDTN QY +++ D K Sbjct: 181 RNNALDFADLLLYSIRLLQEKPAICGFLQDKIEYVLVDEYQDTNKAQYELFKIIVLDKQK 240 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 +VGDDDQSIY +RGA +NI R DF I L +NYRST IL AN LI NN+ Sbjct: 241 FSVVGDDDQSIYSFRGADYQNIFRLEKDFKNLRVIFLTKNYRSTQQILEIANVLIANNDK 300 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R K+LW+D DG L+ A NE DEA FV +IK G +E A+LYR+N QSR Sbjct: 301 RYPKELWSDKKDGTYPVLFRALNEEDEANFVARQIKLEVAKGRRWSEIAVLYRTNRQSRS 360 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 EEAL++ ++PY++ GGM FF+R+E+KD ++YL +I N ND + +R++N P RGIGD T Sbjct: 361 FEEALIRNNIPYKVIGGMSFFDRKEVKDIVAYLNVIYNPNDIVSMKRIINVPRRGIGDAT 420 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 +++R+ ++ +L +A +E+ + ++ F EL L + L Sbjct: 421 FNMIREY-YNKGYSLLEAVKEV-------SKIKKEVKSFYELWTYLLVLKDSLTLRDLIS 472 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 +I + + +E ++ ++ + R+ENL EL+ FS +D L FL+H +L Sbjct: 473 TIINKTNYLSEFENQEKKELENRMENLMELMDFADNFSGKAQDT----LGEFLTHLSLTN 528 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 + ++ + V L+TLHS KGLEF VF+VGMEEG+ P + ++EERRL YVG Sbjct: 529 SKLESTLEEGKVSLITLHSVKGLEFEVVFLVGMEEGILPHYNAT-TKEEIQEERRLCYVG 587 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 +TRA +KL L+YA R Y PSRF+ E+ Sbjct: 588 ITRAKEKLYLSYAAKRY----SRYQEPSRFLEEI 617 >UniRef50_C1TPS7 DNA/RNA helicase, superfamily I n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TPS7_9BACT Length = 656 Score = 750 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 251/646 (38%), Positives = 358/646 (55%), Gaps = 21/646 (3%) Query: 1 MDVSY-LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 M +L+SLN +QREAV+ + LLVLAGAGSGKTRVL ++AWL++ + P+ I+A Sbjct: 1 MTKDSPVLESLNPRQREAVSYEGTPLLVLAGAGSGKTRVLTSKLAWLVAERSVPPWRILA 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLL---RAHHMDANLPQDFQILDS 116 VTFTNKAA EM+ R+ ++ + TFH ++L R ++F + D Sbjct: 61 VTFTNKAAREMKDRVDAMLDGGYPYGQISTFHSFGLQMLFRNRDALEARGYRRNFVVFDR 120 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQA 176 D L L+K+ +KAM LD Q P + I+ K G P + G +E ++Y Sbjct: 121 GDSLSLVKKSMKAMKLDTSQMEPSWVLECISKAK-TGSDPVSMD--GAILEGDMAELYSL 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y ++ G DF +L++ L IL+ R+R ILVDE+QD N Q+A +RLL Sbjct: 178 YTKSLKEQGAFDFDDLIVMPLHLMSTDRDILKKERDRLDWILVDEYQDVNRPQFALLRLL 237 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 AGD+ VM VGD DQSIYGWRGA + I F FPG++ I LEQNYRST IL AAN++ Sbjct: 238 AGDSPNVMAVGDPDQSIYGWRGADMSVILGFERHFPGSKVILLEQNYRSTETILDAANSV 297 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I NN R K+LWT + GEPI++ +E EAR+V + ++ G + A+LYR Sbjct: 298 IGNNVNRPEKRLWTARSGGEPINVVTLGDERAEARYVSDVVEELLSLGYRYTDMAVLYRM 357 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NA SR E+ ++ +PYR+ G F++R+EIKDA+SYLRL N D +A RV N P R Sbjct: 358 NALSRNFEQEFVKRGLPYRVVKGTAFYDRKEIKDAISYLRLAVNPRDASALARVANVPPR 417 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEK-ALAGRAASALQRFMELIDALAQETADM 475 G+G + L+ V + L G+ ++ + +L +D Sbjct: 418 GLGAKGLESVESYLSTHASEARTTWCRIADGGCGLRGKGDKGIRDLARHMISLIDIGSD- 476 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 L+ + ++ G + E+ ++ + R EN+ EL + + L+ L Sbjct: 477 -LNRAVEYIMDVIGYGSYLEKGYPDQFEERRENVMELTSIS---------PGSESLEDVL 526 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEE 594 + AL + + D D + L +LH+AKGLEFP VFIVGME+G+FP SLD G LEE Sbjct: 527 AEIALYTDQ-EVDDIPDGISLSSLHAAKGLEFPVVFIVGMEDGIFPHGRSLDGGRDELEE 585 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 ERRL YVG+TRA ++L LT + RRL+G + + SRFI E+PE Sbjct: 586 ERRLCYVGMTRAEERLYLTSSRFRRLFGSVMNNDVSRFIWEIPENY 631 >UniRef50_P44804 ATP-dependent DNA helicase rep n=275 Tax=Proteobacteria RepID=REP_HAEIN Length = 670 Score = 750 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 247/661 (37%), Positives = 360/661 (54%), Gaps = 9/661 (1%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q++AV LVLAGAGSGKTRV++++IA L+ SP I AVTFTNKAA Sbjct: 2 KLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQIAAVTFTNKAAR 61 Query: 69 EMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ +G Q G+ V TFH L +L+ + + + D DQ LLK L Sbjct: 62 EMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALGFKSNMTLFDEHDQFALLKELT 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRAGL 186 + L E + R+ + I++ K++ + P + + QT+ K Y+ Y Sbjct: 122 ADV-LKEDKDLLRELISVISNWKNDLISPKQAFALARDAKYQTFAKCYERYATQIRTYNA 180 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L++ L+ + ++ + +LVDE+QDTN QY I+LL GD +V Sbjct: 181 LDFDDLIMLPTLLFKQNEEVRSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTVV 240 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA+ EN+ R +DFP I+LEQNYRST IL AN LI+NN K Sbjct: 241 GDDDQSIYSWRGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDK 300 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSRVLEE 365 KL++ GE + + A NE EA +V I + AILYR N QSR+LE+ Sbjct: 301 KLFSTIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSRKTKYKDYAILYRGNHQSRLLEK 360 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L+Q +PY+I GG FF R EIKD ++YLRL+ N++DDAAF R+VNTP R IG TL Sbjct: 361 VLMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDAAFLRIVNTPKREIGTATLQK 420 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + ++++ ++L++A E + + +A +LQ+F I L E ++ Sbjct: 421 LGELAQEKHISLFEAIFEFELIQRITPKAYDSLQKFGRWIVELNDEIQRSEPERAVRSML 480 Query: 486 KDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL--E 541 + + + + +N+ L +E + M L ++ L Sbjct: 481 SAIHYEEYLYEYATSPKAAEMQSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDM 540 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 G+ D D VQLMTLH++KGLEFP V+++GMEEG+ P Q S+DE +EEERRLAYV Sbjct: 541 LERGEDDDDSDQVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDE-DNVEEERRLAYV 599 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA ++LT + RR YG+ V PSRF+ ELP + V R + ++ ++ Sbjct: 600 GITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDVLWERDKPKLTTEQKQEKTQN 659 Query: 662 P 662 Sbjct: 660 Q 660 >UniRef50_B2S250 Rep helicase, single-stranded DNA-dependent ATPase n=4 Tax=Treponema RepID=B2S250_TREPS Length = 657 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 229/647 (35%), Positives = 342/647 (52%), Gaps = 15/647 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +QR AV LL++AGAGSGKTRV+ RIA+++ I+A+TFTNK Sbjct: 1 MLSTLNPEQRRAVTTLEGPLLIIAGAGSGKTRVITARIAYML-ECGILQSRILALTFTNK 59 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM RI L G V TFH +LR H ++F I D D+ L++ Sbjct: 60 AAHEMSERIKALTGKPLRNTTVSTFHAFGVTILREHIHVLGWRKNFSIYDENDKRALIRE 119 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 K ++L + ++ K + +Q ++ Y A Sbjct: 120 AAKEVHLLPEVLDTNCVSTLFSAIKMQRKNLKELQHKERA-------LWHEYHTALKLFN 172 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF +L++ +++ P IL Y+ R+ ILVDEFQDT+ QY +++LA T + + Sbjct: 173 AVDFDDLIVLPIQIFSEYPDILASYKSRYHYILVDEFQDTSAQQYRLMKMLA--TQNICV 230 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY WRGA +NI F DFP A I LEQNYRST IL+AAN +I +N R Sbjct: 231 VGDDDQSIYSWRGAHHDNILSFEKDFPYATEITLEQNYRSTGTILAAANGVIAHNTQRKE 290 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLE 364 K LW+ G+PI ++ E DEA F+ N I + + +L R+N+ R++E Sbjct: 291 KALWSGNDSGKPIEIFNPETERDEAIFIANTILAEQIRASYSFSSFGVLLRTNSFMRIIE 350 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 + LQ ++PYR+ GGM FF+R+EIKD LSYLR+I+N +DD R++NTP RGIG +TL Sbjct: 351 DVFLQENIPYRVSGGMSFFQRKEIKDVLSYLRVISNPDDDVNLLRIINTPRRGIGKKTLH 410 Query: 425 VVRQTSRDRQLTLWQACRELLQEK---ALAGRAASALQRFMELIDALA-QETADMPLHVQ 480 +V + +Q +++ A +++ + L +A++ F++LI + L + Sbjct: 411 LVSDIANTQQCSVFNALNQIINKTHAVDLKESHRTAVENFLQLITQARTHLLSGKNLAYK 470 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + ++D QE + ++ + E+ + L +L+ L Sbjct: 471 VRKFVEDIQYFNYLIQEFQKNEHAARFKFLQIEHLVESIEHWEQSSEHGSLYDYLNRVTL 530 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 A + + AV LMT+H++KGLEFP VFI G+E G P + S++E +EEERRL Y Sbjct: 531 LARDNVQKETEGAVSLMTIHASKGLEFPVVFIAGVEAGTIPHERSIEEVHSIEEERRLFY 590 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLR 647 V +TRA +KL LT+ TR+ GK S F+ E+P+ V Sbjct: 591 VAITRAKEKLYLTHCRTRKRGGKREERTASPFLDEIPKHLVRAHAPE 637 >UniRef50_D2R6Z4 UvrD/REP helicase n=4 Tax=Planctomycetaceae RepID=D2R6Z4_9PLAN Length = 669 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 250/670 (37%), Positives = 367/670 (54%), Gaps = 26/670 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q+EAV R LLVLAGAGSGKTRV+ R+A L+ P I+AVTFTNKAAA Sbjct: 4 GLNPEQQEAVDTLRGPLLVLAGAGSGKTRVVTFRMANLIK-HGTQPDRILAVTFTNKAAA 62 Query: 69 EMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+HR+ L+ T V TFH RLLR H P+ F I D DQ L + ++ Sbjct: 63 EMQHRLSALLKTKSKIKPQVSTFHSHCVRLLRRHARVLGYPEKFAIYDRGDQESLARGVL 122 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAYQEACDRAGL 186 + + + P + I S K G+RP + + ++ Y+ YQ+A AG Sbjct: 123 RDIRVPSDLMRPGDLVTQIGSWKTLGIRPQEAERLASTDKEHLAASGYKKYQKALRHAGA 182 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 VDF +LL+ EL+ P + Q +F ++LVDE+QDTN +QY IR LA + + +V Sbjct: 183 VDFDDLLMLTEELFKIAPQVRQQEARQFDHLLVDEYQDTNGLQYRIIRALADEHRNICVV 242 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA+V++I +F ND+P A+ +RLE NYRSTS IL AN LI N R K Sbjct: 243 GDDDQSIYGWRGAEVKHILQFKNDWPDAKVVRLEWNYRSTSAILETANKLIAYNKHRHDK 302 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIK-TWQDNGGALAECAILYRSNAQSRVLEE 365 L A GE + +E++EAR VV I +D + AIL+R+N Q R +E Sbjct: 303 VLKAARAGGERPRIEQYPSEVEEARQVVADIAFRLKDGTRDPRDFAILFRTNEQPRAIET 362 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L +A +PY + G FF+R+E++D L+YLR I + D+ + R++NTP RGIG+R+++ Sbjct: 363 ELRKAKLPYVMLGSQSFFDRKEVRDLLAYLRAIESPRDEVSMLRIINTPPRGIGERSVET 422 Query: 426 VRQTSRDRQLTLWQACRELLQEK----------ALAGRAASALQRFMELIDALAQETA-D 474 V + T+W L + L+ + +A++ F LI ++ TA Sbjct: 423 VLSEAVRSGKTVWDVVSNLSEGPTLFGDAEKTTTLSDKNVAAIRSFSNLIQRYSEATARG 482 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEK--GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 L T ++I ++G + E+ Q R+ +EE+V + + EE + Sbjct: 483 DSLAELTRKLISETGYEQEVRRIYPDPEEQQMRLAAVEEVVNSVAAYEAEEEKP---SIS 539 Query: 533 AFLSHAAL----EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-- 586 +L L + + ++A+ LMTLH++KGLEFP V+++G+E+G+ P S+ Sbjct: 540 GYLDQVTLGQREMGDDKEKQLARNAIALMTLHASKGLEFPHVYMIGLEDGILPHSRSVKA 599 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 D +++EERRL YVG+TRA ++LTL+ A TR +GK PSRF+ E+ + Sbjct: 600 DSQDQIDEERRLCYVGITRAQERLTLSLALTRMKWGKPRDTTPSRFLFEIIGQADNPHSR 659 Query: 647 RATVSRPVSH 656 T R S Sbjct: 660 GGTRPRSSSR 669 >UniRef50_Q256I8 DNA/RNA helicase n=17 Tax=Chlamydiales RepID=Q256I8_CHLFF Length = 636 Score = 746 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 234/638 (36%), Positives = 347/638 (54%), Gaps = 15/638 (2%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN+ Q AV AP S +LVLAGAG+GKTRV+ RI L+ +P I+AVTFTNKAA Sbjct: 5 ELNEAQIAAVTAPLSPVLVLAGAGAGKTRVVTCRILHLIKE-GIAPREILAVTFTNKAAK 63 Query: 69 EMRHRIGQLMGT--SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 E++ RI V TFH L +LR N +F I D D +LLK+ Sbjct: 64 ELKERILHQCPQVSGADIPMVCTFHSLGVFILRRSIQALNRENNFIIYDQSDTDKLLKQC 123 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 ++ NL K+ ++I+ K+ L P + +Y+ YQ+ Sbjct: 124 LQKFNL--KKTLSSSIQYHISQAKNRLLYPEDLDP--EEYVDPVVSIYKEYQQRLKETNA 179 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +LL +L+ + P + + Y E + +L+DE+QDTN+ QY + +AG + V Sbjct: 180 LDFDDLLFLTVKLFKDFPEVKKEYSELWKALLIDEYQDTNHAQYMMAQTIAGKHQNIFAV 239 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GD DQSIY WRGA + NI F D+P A +RLE+NYRS NIL+AANALI+NN RL K Sbjct: 240 GDPDQSIYSWRGANIHNILNFEQDYPQARVLRLEENYRSYGNILNAANALIQNNASRLKK 299 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEE 365 L + GE I ++ + DEA FV + I + L + I YR+N QSR E+ Sbjct: 300 NLRSVKGPGEKIRVFLGKTDKDEAEFVASEIYRLHKRSNIPLRDFCIFYRTNFQSRTFED 359 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 ALL+ +PY I GG+ F++R+EI+D L++LR+ + D AF+R VN P RG+G + Sbjct: 360 ALLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKCDVVAFDRTVNLPKRGLGPSAISS 419 Query: 426 VRQTSRDRQLTLWQACRELLQEK--ALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + L + +ACR L+ L+ + L ++ + L + +PL+ Sbjct: 420 LIDYALTNNLPILEACRNALETHSVKLSKKQQEGLWSYLSIFQQL-ERAYTLPLNEFVIA 478 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 I+ +G + +++ + + R NL+EL + T ++ + L++FL AL++ Sbjct: 479 TIRITGYLQVLKED-PDTFEDRKSNLDELASKTFEWEQQNTEGT---LESFLDDLALKSS 534 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + + D V LMT+H+ KGLEF F+VG+EE +FP S LEEERRL YVG+ Sbjct: 535 TDETELIADRVNLMTIHNGKGLEFRIAFVVGLEENLFPHANSKGNYENLEEERRLCYVGI 594 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 TRA L LT A+TR L+G +PSRF+ E+P + + Sbjct: 595 TRAQDLLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDYL 632 >UniRef50_A9M0G6 ATP-dependent DNA helicase n=38 Tax=Betaproteobacteria RepID=A9M0G6_NEIM0 Length = 690 Score = 746 bits (1926), Expect = 0.0, Method: Composition-based stats. Identities = 244/643 (37%), Positives = 363/643 (56%), Gaps = 16/643 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN +Q EAV LLVLAGAGSGKT V+ +I +L+ P+++ A+TFTNKA Sbjct: 20 MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKYLIVNVGYLPHTVAAITFTNKA 79 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AAEM+ R+ +++ + G+ + TFH L ++LR ++F ILDS D +++ Sbjct: 80 AAEMQERVAKMLHKSQTRGLTICTFHSLGMKILREEANHIGYKKNFSILDSTDSAKIIGE 139 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQEACDRA 184 L+ + +A I+ K++ P + Q+ N EQ +VY +YQE Sbjct: 140 LLGGTG----KEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQQTARVYASYQETLQSY 195 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ L + ++ R +LVDE QDTN Q+ ++LL G G Sbjct: 196 QAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTNTCQFTLMKLLTGAEGMFT 255 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY WRGA +EN+++ ++P + I+LEQNYRST+ IL AN +IENN Sbjct: 256 AVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYRSTARILKIANKVIENNPKLF 315 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA---LAECAILYRSNAQSR 361 KKLW+ +GEP+ + NE EA +VV++I + GG A+ A+LYR Q+R Sbjct: 316 TKKLWSKLGEGEPVKVVACQNEQHEADWVVSQIVKQKLIGGDKTQYADFAVLYRGKHQAR 375 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 + EEAL A +PYR+ GG FF++ EIKD LSY+RL+AN NDD AF R V TP RGIGD Sbjct: 376 IFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRLLANPNDDPAFLRAVTTPKRGIGDV 435 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 TL + + + + +L++A + L LQ FM++ + + Sbjct: 436 TLGKLNTYAHEHECSLYEAAQNEEALATLNNTNRQHLQAFMDMFGSYRAKAETGEAGEFI 495 Query: 482 DRVIKDSGLRTMY-EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + ++++ + E+G+ G+ + N+ +LV+ + + ED + AL Sbjct: 496 NSLLEEIDYENHLMQNEEGKAGEIKWRNVSDLVSWFAR----KGGEDGKNIIELAQTVAL 551 Query: 541 EA-GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 EG+ + DAV L TLH+AKGLE+P VF+VG EEG+ P S++E G +EEERRL Sbjct: 552 MTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLVGCEEGVLPHNDSIEE-GNVEEERRLM 610 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE 642 YVG+TRA ++LTLT+ R+ G + PSRFI E+P+E ++ Sbjct: 611 YVGITRAKRQLTLTHCVKRKKQGTWQFPEPSRFIDEMPQEDLK 653 >UniRef50_Q6MAS4 Probable ATP-dependent DNA helicase, mutU n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MAS4_PARUW Length = 668 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 252/672 (37%), Positives = 374/672 (55%), Gaps = 32/672 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + L++LN +Q+ AV +L+LAGAGSGKTRVL R+A+L+ N SP +I+ +TF Sbjct: 1 MEKELETLNPEQKHAVKLINGRVLILAGAGSGKTRVLTMRMAYLIRYLNVSPRAILGLTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAAAEMRHR+ + + + + TFHG ++LR F + D +D R Sbjct: 61 TNKAAAEMRHRLANFVDSKLAKQVTLCTFHGFCMQILRQDIAKLGYTTKFSLYDEQDVQR 120 Query: 122 LLKRLIKAMNLDEKQWP-PRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQE 179 L+ +++ + E + P + I K++G+ P +I+ S Q VY+ Q Sbjct: 121 LINMIVRDILQHEGELPSLTSTLNAIRHAKNKGISPENIEISESKWHNSFVQDVYRRLQA 180 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + VDF LL EL P +L+ Y+ERF +++DE+QDTN IQY LL Sbjct: 181 SMRAYNAVDFDHLLSLTVELLERFPDVLEAYQERFRYMMIDEYQDTNPIQYRLASLLTSK 240 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQSIYGWRGA V+NI F A I+LEQNYRST+ IL AANA+I++ Sbjct: 241 YQNLCVVGDDDQSIYGWRGADVKNILEFEK----ATVIKLEQNYRSTNFILKAANAVIDH 296 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNA 358 N R KKLW++ +G PI ++ NEL+EA+ VV RI +++ + AILYRSNA Sbjct: 297 NQYRHKKKLWSEKGEGHPIEVFHTPNELEEAQVVVKRIVKMKESLNLQWKDFAILYRSNA 356 Query: 359 QSRVLEEALLQ----------ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 SR E AL++ +PY I+GG F+ER+E+KD +YLRLI N D A Sbjct: 357 LSRQFETALMRQVWKFQNRWIQGIPYEIFGGTEFYERKEVKDLCAYLRLIINPADQEALL 416 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA------LAGRAASALQRFM 462 R+VN P RGIG+ +LD++ +R Q LW +E+ +K G+A + F Sbjct: 417 RIVNQPRRGIGEDSLDLLTTHNRQFQRPLWDVLKEVANQKGEGAKLIYHGKAFKGICEFT 476 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT--RIENLEELVTATRQFS 520 LI + + L +I+ + ++E + + EN++E V++ +F Sbjct: 477 HLISEAKKRFQEGNLAENLKWLIEQINYQKAIKEEVKSQQMRDFKWENIQEFVSSLAEFE 536 Query: 521 YNEEDED--LMPLQAFLSHAALE---AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGM 575 + L+ FL + ++ + + +D V L+T HSAKGLEFP F+VGM Sbjct: 537 QQAQLNPDLESSLENFLGNMYVDNKFNQSTKNNRHEDRVSLLTFHSAKGLEFPVCFLVGM 596 Query: 576 EEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 E+ + P + S+ E G +EEERRL YV +TRA Q LT++ A+ R+ GK++ RPSRF+ E Sbjct: 597 EDHIIPHEKSMKETG-IEEERRLMYVAITRAQQHLTISMAQQRKRMGKDMASRPSRFLFE 655 Query: 636 LPEECVEEVRLR 647 +P+E ++ R Sbjct: 656 IPKELLKMTDWR 667 >UniRef50_A5IY88 ATP dependent helicase n=2 Tax=Mycoplasma RepID=A5IY88_MYCAP Length = 734 Score = 742 bits (1917), Expect = 0.0, Method: Composition-based stats. Identities = 238/728 (32%), Positives = 378/728 (51%), Gaps = 22/728 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + +SLN+++ EA+ L ++AGAGSGKTRVL +IA+L++V SP I+AVTFTN Sbjct: 13 KIFESLNEEETEALYYFDGPLRIIAGAGSGKTRVLTRKIAYLINVLGISPDHILAVTFTN 72 Query: 65 KAAAEMRHRIGQLMGTSQGG--MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 KAA+EM R+ Q T + TFH L R+LR NL DFQI+D D+ ++ Sbjct: 73 KAASEMSERVKQYTNTKFNKGTAEISTFHSLCARILREEAFHINLKNDFQIIDDNDKKKI 132 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI---------QSYGNPVEQTWQKV 173 LK + K +L + + + K++ +S +T K+ Sbjct: 133 LKDIYKEHDLVPTDSNFKNLTRFFSWLKNKLYASDEEIIDFINSDPESEFYGDGETVVKI 192 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y Y E +DF +LL++ +EL+ P I++ + +++ ILVDEFQDT+ IQY I Sbjct: 193 YNFYNEQLKHLQSLDFDDLLIKVNELFYKNPEIVKKWALKYSYILVDEFQDTSAIQYEII 252 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 + L+ ++ IVGD DQ+IY WRGA V I F DF +TI L +NYRST IL+AA Sbjct: 253 KYLSSQKAQLTIVGDPDQTIYRWRGADVNLILSFEKDFENTKTIILNKNYRSTKKILAAA 312 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 N LI+ N R K L TD +DG+ I AF+ E R+VV +I + L AI Sbjct: 313 NNLIKYNRNRFNKNLVTDNSDGDEIEYIHAFSPEAEVRWVVQKINDLKKQKIQLKNIAIF 372 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YRSN+ SR EE L+ + Y+I+GG +F++R+EIKDAL++LR+I + ND +R++N Sbjct: 373 YRSNSYSRNFEEQLMNEKINYKIFGGEKFYQRKEIKDALAFLRVIYDGND-LQLKRIINV 431 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET- 472 P R IG+ +L+ + + ++ L+L++ +E + + + ++ Sbjct: 432 PPRKIGEASLNKIISFANEKNLSLYKTLVNHYKELPVPKEVIINIIALLNCVNKYKAALR 491 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 +HV +K+ G ++ G KG EN+ L+ + + ++ L+ Sbjct: 492 QGNKIHVVLKSFLKEIGFLKYVNEDVGLKGTG-EENIRALLEGIKSWEITNPNKG---LK 547 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 + + +L + ++ V LMT+H+AKGLEF VF+VGM E +FP+ + + Sbjct: 548 EYFEYISLISASDSSNESMSYVSLMTVHAAKGLEFDNVFLVGMCENIFPNYRAYKVAEAM 607 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 EEERRLAYV +TRA +KL ++ + LY + +PSRF+ E+ + + + + Sbjct: 608 EEERRLAYVAITRAKEKLFVSDSRGLLLYSQT-EKKPSRFLKEMGIDINKHILQKDNSIF 666 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 + + + G + H FGEG ++ + G + V F GIK L Sbjct: 667 VDGELEDEEQIRKRNKKIIAGDVISHTFFGEGEVLEVNGD----TITVHFATTGIKSLAK 722 Query: 713 AYARLESV 720 + + + Sbjct: 723 NHQSVRLL 730 >UniRef50_C8P127 ATP-dependent DNA helicase PcrA n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P127_ERYRH Length = 715 Score = 742 bits (1916), Expect = 0.0, Method: Composition-based stats. Identities = 248/726 (34%), Positives = 393/726 (54%), Gaps = 30/726 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + LN +Q+EAV ++ V+AGAGSGKTRVL RI L++ P I A+TFTN Sbjct: 2 DYIQGLNKEQKEAVLTKAKHVRVIAGAGSGKTRVLTTRIVHLIADLGYYPSKICAITFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ R+ ++ + + T H L R++R + NL ++F ILD+ DQ +++ Sbjct: 62 KAANEMKERMEAMLPDAI-RVHTSTIHSLCVRIIREEYEALNLVRNFTILDTSDQQAVMR 120 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG--NPVEQTWQKVYQAYQEACD 182 K + D K R+A+ YI++ K G+ + N EQ +Y+ Y Sbjct: 121 EAYKQFDYDRKDISFREALTYISNNKFAGVDVAQAERMAGSNYHEQKKVNLYRFYVNRLH 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LLL + L+ + +R RF +LVDEFQD +++QY + L GD + Sbjct: 181 ELFALDFDDLLLEVNRLFKENLEVRDKWRRRFDVVLVDEFQDVDHVQYGIVDALVGDENQ 240 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGD DQ+IY WRGA V+ I F +P +ETI L QNYRST +IL +AN LI+NN Sbjct: 241 LYVVGDPDQTIYTWRGANVDFIIDFDKKYPESETITLNQNYRSTQHILDSANTLIKNNKD 300 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R K L+ + P+ + EA +V NR+ D G + + A+LYRSN SR Sbjct: 301 RPDKALYANKESEFPVQYATLDDGDAEAYWVANRMLELHDEGHSYLDMAVLYRSNYLSRA 360 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE+ L+ +PY IYGG+RF+++ EIKD +SYLR+I + DD A R + P RGIG++T Sbjct: 361 LEKVLMARRIPYVIYGGLRFYDQAEIKDMMSYLRMITH-GDDLALRRSIAMPRRGIGEKT 419 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 LD + +R+R++T++++ +A ++ ++ +I+ + + + Sbjct: 420 LDTIMLQAREREMTMYESML----YDVHHQQATPKIRNYVMMIEDFREMAQEASIETIMQ 475 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 V+K SGLR +E+ + R+E+L+EL+ F N E+ L ++ +L Sbjct: 476 YVLKRSGLREHFEK---IQELERVESLKELIGDALTFQENYENP---SLDEYIQMVSLYG 529 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRLAYV 601 + + + V+LMT+H+AKGLEF VFI+G+ + +FP++ S+ EG G ++EERRL YV Sbjct: 530 DKSEVVEG-EYVRLMTVHAAKGLEFENVFIMGLADNIFPNKNSIQEGSGGIQEERRLMYV 588 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP-EECVEEVRLRATVSRPVS----- 655 +TRA ++L L+ + Y R SRFI E+ +E E+ T+SR Sbjct: 589 AITRAKERLFLSNNIGYN-FVAGGYARASRFIKEMHLDEKTSEMEATPTISRSEVQDAIS 647 Query: 656 --HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVA 712 + G ++ +K G +V H FGEG ++ + + +++AF G K + Sbjct: 648 SFEKASGLSKLKKKIKFKSGDQVVHDDFGEGIVIRV----DDDTIKIAFNFPHGTKVISR 703 Query: 713 AYARLE 718 YA + Sbjct: 704 KYAGIR 709 >UniRef50_D0JAI1 ATP-dependent DNA helicase n=2 Tax=Blattabacterium RepID=D0JAI1_BLASB Length = 709 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 235/721 (32%), Positives = 390/721 (54%), Gaps = 26/721 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN QR+ + +LVLAGAGSGKTRV+ +RI ++ +P +I+A+TFT KAA Sbjct: 2 SLNSSQRKIIETINGPILVLAGAGSGKTRVITYRIVHMIQNIGINPSNILALTFTKKAAK 61 Query: 69 EMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+HRI ++ + +GTFH + LLR ++ I D D ++K+++ Sbjct: 62 EMKHRISNMIDQKKLNQITLGTFHSIFSILLRKESHLLGYKSNYTIYDQRDSENVIKKIL 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + +NLD ++ I+ K+ I N + K+Y++Y + C +A + Sbjct: 122 EDINLDI-SLSTKEIRRIISEYKNNLY----INKKNNKQSECLIKIYKSYIKRCLQAEAL 176 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF ++LL + L+ + P++L+ Y+ +F IL+DE+QDTN Q I+ LA + +VG Sbjct: 177 DFDDILLHTNHLFSHFPNVLRKYQNKFKYILIDEYQDTNLSQNTIIKSLAFQHKNLFVVG 236 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD QSIY +RGA++ NI F D+ A+ RLEQNYRST +I+ A+N +I N ++ KK Sbjct: 237 DDAQSIYAFRGAKISNILNFHIDYKNAKVFRLEQNYRSTHHIVQASNNIISFNKNQILKK 296 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQSRVLEEA 366 +WT+ GE + +Y A +E +EA +V + I + + AILYR+N QS ++E A Sbjct: 297 IWTNNEKGEKVKIYSASSEKEEALYVASSIFSIIKKTKYHYKDFAILYRANMQSNIIEYA 356 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L + ++PY+IYG + F +R+EI+D L+YLR+I N ND+ + R++ +T+ + Sbjct: 357 LKEKNIPYKIYGSISFEKRKEIRDLLAYLRIIVNSNDEESLLRILKKGN----KKTIKSI 412 Query: 427 RQTSRDRQLTLWQACRELLQEKA---LAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 S+ ++T+++ + + + L + + L+ + I+ + T Sbjct: 413 LDLSKKIRITVYEIIKNIENYQHLLILNQKTKNKLKNLISTIEKFRKNTEKKDAFAIAKE 472 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 ++ L+ + K E Q + N+ V+ ++ N E + L FL + LE Sbjct: 473 IVNFL-LKEDPKNYKNENFQYILNNIFCYVSEQKKLKDNGE----ISLSGFLQYFYLEID 527 Query: 544 EG--QADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 E + ++ V LMT+H +KGLEF VFI+G+EE +FPS+ SLD ++EEERRL YV Sbjct: 528 EDMNHDENEENKVSLMTVHLSKGLEFSIVFIIGLEENLFPSKSSLDNQFKIEEERRLFYV 587 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG- 660 +TRA +K LTYA +R L+G+ PSRFI EL + ++ + S + Sbjct: 588 ALTRAQKKAVLTYARSRFLWGERKMTLPSRFINELNKNFIDRENQNSISSLSEKKEINSL 647 Query: 661 -TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 ++ +K G +V H FG G I+++ E+ ++ F G K ++ +A L+ Sbjct: 648 VNNKNKHYENFKAGVKVFHKNFGTGIILDL--QNENKIARIKFIKSGEKKILLKFA-LDK 704 Query: 720 V 720 + Sbjct: 705 L 705 >UniRef50_Q67LG5 ATP-dependent DNA helicase n=1 Tax=Symbiobacterium thermophilum RepID=Q67LG5_SYMTH Length = 671 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 254/658 (38%), Positives = 362/658 (55%), Gaps = 30/658 (4%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D+ +++ LN QR A LLV+AGAG+GKTR HR+A L++ P ++M +T Sbjct: 3 DLEAIVEGLNPAQRAAALHQDGPLLVIAGAGAGKTRTATHRLACLLA-RGVPPEAVMCIT 61 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH---MDANLPQDFQILDSED 118 FTNKAA EMR R L+G + + TFH A LLR + ++ F + D Sbjct: 62 FTNKAAREMRDRAVALVGADARRVMIRTFHSAAMVLLRQYIGDFPESGRTPSFTVADPTI 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY---------------- 162 QL LLK I N D K P +W I K+E P + + Sbjct: 122 QLALLKEAIAERNFDLKANRPESFLWRIGRYKNELADPESLLARQPSHDLMDWSRVLEMI 181 Query: 163 ---GNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 V + ++++ Y+E R +VDF +L+ ++ KP I + RFT + V Sbjct: 182 RSTDRYVNRLTAEIWKRYEEKLRRNDMVDFDDLINLFVQMLREKPDIRADLQRRFTYLQV 241 Query: 220 DEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 DEFQDTN Q ++LLAG VM VGDD QSIY WR A + I F FPGA TI L Sbjct: 242 DEFQDTNVAQLHMVKLLAGKRQNVMAVGDDAQSIYSWRSADIRCILEFERHFPGARTILL 301 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 EQNYRST I+ AAN LI +N G+ K+L+T +G P+ + A E+DEA++VV RI+ Sbjct: 302 EQNYRSTGAIIRAANRLIAHNAGQRPKRLFTAAPEGRPVVAHEAETEVDEAKWVVQRIRA 361 Query: 340 WQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIA 399 + G + AILYR+ AQ R EE L +AS+PY++ GG RF++R+E++D+L+YLRL+ Sbjct: 362 GAEAGRRWGDFAILYRTTAQGRPFEEELREASIPYQVVGGPRFYDRREVQDSLAYLRLVH 421 Query: 400 NRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQ 459 N D + ERV+N P RGIG+R L + + R + L A R E L AA+ + Sbjct: 422 NPRDSVSLERVLNAPRRGIGERGLQRLLALAAQRGVDLIAALRVAADEGVLQDEAAAGAR 481 Query: 460 RFMELIDALAQETADMP--LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 + + + + P +R++++SG ++E K + R E +E L+ A Sbjct: 482 QLHDHLRRAREALERQPGRFAAAMERLLRESGYLAYLQEEDRRKEERRSEVVESLIAAMH 541 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEE 577 +F D L A+L H AL G+ + ++ D V+L T+HSAKGLE+P VF+VGME+ Sbjct: 542 EFERRSPDGG---LGAYLDHLALLEGQ-EDESGGDVVKLQTIHSAKGLEYPVVFVVGMEQ 597 Query: 578 GMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 G+ P Q +L+E G LEEERRL YV +TRA ++L LT A R G+ V PS+F+ E Sbjct: 598 GLLPYQRALEE-GNLEEERRLCYVAITRAREELYLTGARVRWQRGEMVLTTPSQFLSE 654 >UniRef50_C5BBB0 ATP-dependent DNA helicase Rep, putative n=2 Tax=Edwardsiella RepID=C5BBB0_EDWI9 Length = 726 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 246/668 (36%), Positives = 370/668 (55%), Gaps = 10/668 (1%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 ++ LN Q++AV LVLAGAGSGKTRV+ ++IA L+ V I AVTFTN Sbjct: 49 NIVMRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRVCGYQARHIAAVTFTN 108 Query: 65 KAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ R+ Q +G G+ + TFH L +++ + + +F + D +DQL LL Sbjct: 109 KAAREMKERVAQTLGRKEARGLMISTFHTLGLEIIKREYKALGMKSNFSLFDDQDQLALL 168 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPV-EQTWQKVYQAYQEACD 182 L + L++ + +Q + I++ K++ + P + E+ + Y Y Sbjct: 169 TDLTERW-LEKDKTQLQQLIATISNWKNDLIDPAQAAAQARSARERLFADCYGLYDTQLK 227 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 ++DF +L+L L P + + +++R +LVDE+QDTN QY ++LL G + Sbjct: 228 SCNVLDFDDLILLPTLLLRRDPEVRERWQQRIRYLLVDEYQDTNTSQYELVKLLVGSRAR 287 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 +VGDDDQSIY WRGA+ +N+ DFP + ++LEQNYRS+ IL AAN LI NN Sbjct: 288 FTVVGDDDQSIYSWRGARPQNLVLLKEDFPALQVVKLEQNYRSSQRILKAANILIANNPH 347 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSR 361 K+L+++ GEP+ + A NE EA VV I + A ++ AILYR N QSR Sbjct: 348 VFEKRLFSELGYGEPLKVITANNEDHEAERVVGELIAHHFIHKTAYSDYAILYRGNHQSR 407 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 V E+ L+Q +PY+I GG FF R EIKD LSYLR++ N +DD+AF R+VNTP R IG Sbjct: 408 VFEKMLMQNRIPYKISGGTSFFSRAEIKDLLSYLRVLTNPDDDSAFLRIVNTPRREIGPS 467 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 TL + + R ++L++A ++ E+ L+GR ++LQ F +D L++ Sbjct: 468 TLQKLGAWANQRGISLFRASFDVGLEQTLSGRGLASLQHFTRWMDELSRLCERDA-TAAV 526 Query: 482 DRVIKDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +I + + + R++N+ +L + ++ M L ++ Sbjct: 527 RDLIHGIDYESWLCETSASPRAAEMRMKNVNQLFGWMTDMLQGSDLDEPMTLTQVVNRFT 586 Query: 540 L--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 L G+++ D VQLMTLH++KGLEFP V++VGMEEG+ P Q S+DE ++EERR Sbjct: 587 LRDMMERGESEEEADQVQLMTLHASKGLEFPYVYLVGMEEGLLPHQSSIDE-DNVDEERR 645 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQ 657 LAYVG+TRA + L T RR YG+ + PSRF+ ELP++ + R VS Q Sbjct: 646 LAYVGITRAQKALVFTLCRERRQYGELMRPEPSRFLLELPQDDLSWESARKVVSPQERMQ 705 Query: 658 RMGTPMVE 665 R + + Sbjct: 706 RGQSHLAN 713 >UniRef50_D1R4U3 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R4U3_9CHLA Length = 677 Score = 738 bits (1905), Expect = 0.0, Method: Composition-based stats. Identities = 253/676 (37%), Positives = 372/676 (55%), Gaps = 35/676 (5%) Query: 2 DVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 D LD+LN QR AV +L+LAGAGSGKT+VL R+A+LMS++ SP SI+ +T Sbjct: 4 DFKEELDALNPSQRAAVTTTDGRVLILAGAGSGKTKVLTVRMAYLMSIKGASPKSILGLT 63 Query: 62 FTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 FTNKAAAEMRHRIG + + TFH ++LRA F + D +D Sbjct: 64 FTNKAAAEMRHRIGAFAAPHIAKQISLCTFHSFCMQILRAEIHKLGYTPQFSLYDEKDVQ 123 Query: 121 RLLKRLIKAMNLDEKQWP-PRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAYQ 178 RL+ + + + E + P IN +++GL I G+ + + +YQ Q Sbjct: 124 RLIGLIARDVLEHEAELPSLASTTAVINQAQNKGLASEEICDTGSEWHDEFARTIYQRLQ 183 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + VDF LL +L+ N P +L+ Y+ER+ I++DE+QDTN +QY LL+ Sbjct: 184 ASLRAYNAVDFNNLLGLTVQLFENFPDVLEKYQERYRYIMIDEYQDTNPVQYKLASLLSR 243 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYGWRGA+V+NI DF A TI+LEQNYRST+NIL AAN +I Sbjct: 244 KYQNLCVVGDDDQSIYGWRGAEVKNIL----DFSDATTIKLEQNYRSTNNILKAANGVIS 299 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSN 357 +N R K LW++ +G+ I ++ A ++ +EA VV RI ++ + AILYRSN Sbjct: 300 HNQTRYQKVLWSNRGEGDLIEVFHAPSDKEEAEAVVYRIAHMREKYQLKWRDIAILYRSN 359 Query: 358 AQSRVLEEALLQ----------ASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAF 407 A SR+ E AL+ +PY I+GG F+ER+E++D +YLR+IAN D A Sbjct: 360 ALSRLFELALMNYAWKDGDQWIKGIPYEIFGGTEFYERREVRDLFAYLRVIANPLDQEAL 419 Query: 408 ERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA--------LAGRAASALQ 459 R++N P RGIG+ +LD +R QL LW + L + + +A +LQ Sbjct: 420 LRIINQPRRGIGEASLDAATAYNRSHQLPLWNVLKSLANREPAVQEVSSHWSQKALDSLQ 479 Query: 460 RFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQT--RIENLEELVTATR 517 F+ +++ Q + T +I+ + E + EN++E V++ Sbjct: 480 GFIGILENSKQRFEQDFSYALT-ELIEAVNYKKAINDEVKSAQMRDFKWENVQEFVSSLV 538 Query: 518 QFSYN--EEDEDLMPLQAFLSHAALEAGEGQAD---TWQDAVQLMTLHSAKGLEFPQVFI 572 +F+ + +E L F++ L+ Q+ +D V LMT HS+KGLEF F+ Sbjct: 539 EFNESFLKEFNKTPTLHDFITSTPLQQDWNQSQKNTQQKDQVNLMTFHSSKGLEFKACFL 598 Query: 573 VGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRF 632 VG+E+ + P + SL E G +EEERRL YVG+TRA Q LT++ A R+ GKE +PSRF Sbjct: 599 VGIEDHIIPHEKSLKEVG-VEEERRLMYVGITRARQFLTISMARKRKRMGKEYASKPSRF 657 Query: 633 IGELPEECVEEVRLRA 648 + E+P+E + + Sbjct: 658 LHEIPKELLNITKWDQ 673 >UniRef50_A6GB18 ATP-dependent DNA helicase PcrA n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB18_9DELT Length = 845 Score = 735 bits (1899), Expect = 0.0, Method: Composition-based stats. Identities = 261/691 (37%), Positives = 376/691 (54%), Gaps = 68/691 (9%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN QR V LL+LAGAG+GKTRV+ R+A L+ + I+AVTFTNKAA E Sbjct: 7 LNPAQRAGVEYRGGPLLLLAGAGTGKTRVITQRVAALIDE-GVPAWRILAVTFTNKAAGE 65 Query: 70 MRHRIGQLMGTS-----QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 MR RI L+ + G W+GTFH + R+LR H L ++F I D++DQ L++ Sbjct: 66 MRERIAGLLEMELDELRRDGPWIGTFHSICARILRRHGQGVGLTRNFSIYDADDQKTLMR 125 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS--YGNPVEQTWQKVYQAYQEACD 182 R++K +++D K + A+ I++ K+ G H + + Y PV +K + Y+ Sbjct: 126 RVLKDLDIDPKAFSASAALGKIDAAKNLGYARHQLDAMNYSEPVASWTRKAWTLYEGRLR 185 Query: 183 RAGLVDFAELLLRAHELWLN------KPHILQH--------------------------- 209 A VDF +LL A EL +P Sbjct: 186 AADAVDFNDLLALAVELLRKAKPAQPQPGARSFGSGSGSGSGSGARRMALRTTRGPGSGA 245 Query: 210 -------------YRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 R RF +++VDEFQDTN +Q + LL G + ++ +VGDDDQ+IYGW Sbjct: 246 PTASGGAVNPVLGLRRRFFHVVVDEFQDTNPVQAELVELLCGPSAQLCVVGDDDQAIYGW 305 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGE 316 RGA V+ I F + PG E IRLEQNYRST++IL ANA+I R K+LW+D GE Sbjct: 306 RGADVKQILNFPDRHPGCEVIRLEQNYRSTTHILDCANAVIRGGARRHSKRLWSDLGPGE 365 Query: 317 PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRI 376 L+ +E DEA++V R++ D G + E A+ YR++AQSR LEEA+ A + YR+ Sbjct: 366 RAELHGFADERDEAQYVARRVRRAIDEGESPGEIAVFYRTHAQSRPLEEAMRLAGVRYRM 425 Query: 377 YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLT 436 GG+RFF+R+EIKD ++YLRL+ N D RV+N P R IG RT++ + + ++ + Sbjct: 426 LGGIRFFDRREIKDLIAYLRLLTNPGSDLDCLRVINVPARRIGARTIERLSAWAISKESS 485 Query: 437 LWQAC---RELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTM 493 L+ AC + +E L A A++ F EL++ L ++ ++ H V+ + Sbjct: 486 LYDACGPASKHGEEAGLGRAAVKAVKGFWELVEGLRDDSEELSHHETASLVLGRTNYLES 545 Query: 494 YEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDA 553 + E+ + TR ENL E A +F + D + L +L +L AG +A T A Sbjct: 546 FAAEQDAE--TRTENLYEFRGALEEFGEEQPD---VSLAEYLEQISLAAGGDEA-TVDAA 599 Query: 554 VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-----GRLEEERRLAYVGVTRAMQ 608 + LMT+HSAKGLEF +V + GMEE +FP SLD LEEERRLAYV ++RA + Sbjct: 600 ITLMTIHSAKGLEFDRVMLTGMEERVFPHVRSLDPENPKGREALEEERRLAYVAISRARR 659 Query: 609 KLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 L+L++ E R L+G + PSRF+ LPEE Sbjct: 660 WLSLSFVERRFLWGSTQLNEPSRFLRALPEE 690 Score = 57.0 bits (137), Expect = 3e-06, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%) Query: 645 RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 P + D+ G RVRH K+G G ++ GSG ++L + F G Sbjct: 773 EPETGPYEPAEPETTVEYEAHADAEIFQGMRVRHKKYGVGIVIGWTGSGPTAKLTIGFGG 832 Query: 705 QGIKWLVAAY 714 + +VA + Sbjct: 833 T-RRTIVARF 841 >UniRef50_C1ZKV9 DNA/RNA helicase, superfamily I n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZKV9_PLALI Length = 680 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 222/643 (34%), Positives = 338/643 (52%), Gaps = 18/643 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q+EAV R LLVLAGAG+GKTRV+ +R+A L++ P I++VTFTNKA Sbjct: 4 ISHLNRPQQEAVRTHRGPLLVLAGAGTGKTRVITYRMADLIAA-GVDPERILSVTFTNKA 62 Query: 67 AAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM R L+G + + + TFH +LR P+ F I D DQ ++ Sbjct: 63 AREMLDRTSLLLGRTMKKRPTISTFHSWCVGILRQEIDSLGYPKQFVIYDRGDQESAARK 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEACDRA 184 ++ + + + P + I+ K +G+ P Q + + Y+ YQ A A Sbjct: 123 ALQVLKMTDTALKPGDLLAQISRWKMQGVMPDLAQEIADSDHEQLAGMAYRRYQLALKAA 182 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 G VDF +LL +L+ + P L+ + RF + +DE+QDTN +Q+ I + + Sbjct: 183 GGVDFDDLLFLTFQLFKHHPEALERQQNRFDFVQIDEYQDTNELQFRLIESIVRRHQNLC 242 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGDDDQSIYGWRGA+V++I F FP A+ +RLE NYR T +I+ AN L+ +N GR Sbjct: 243 VVGDDDQSIYGWRGAEVKHILGFKQSFPAAKVVRLEDNYRCTESIIQLANQLVAHNRGRH 302 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 K+L G + +E EA VV I E AIL+R+N Q R+ Sbjct: 303 EKRLIAHRG-GTSVVFREYPDEQAEAEGVVRDIAYLIHQLNVRPCEIAILFRTNEQPRIF 361 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E L + + YRI GG FF+R+EIKD +YL+++ N DD + R++N P RGIGD T Sbjct: 362 EHELRRKQIHYRIVGGQSFFDRKEIKDLQAYLKVLVNPRDDLSLLRIINVPPRGIGDATC 421 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ--ETADMPLHVQT 481 + + + + W + + +A + L++F + + L + + + L Sbjct: 422 ERLLARAVKEKRRFWDVIPDAAAAGEITSKALNNLRQFEKQMSGLREAFKQPGVKLSETF 481 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIEN--LEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 R+++ +G E+ Q + N L E A Q+ L+ +L + Sbjct: 482 LRMVETTGYAREIERTYKSAEQQEMRNLILGEFANAVSQYEAQ---SRSPSLEGYLDEIS 538 Query: 540 LEAG--EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE----GGRLE 593 L ++A+ LMTLHSAKGLEF +V++VG+EEG+ P + S+DE +E Sbjct: 539 LGGSDFAAPERPDENAITLMTLHSAKGLEFERVYLVGLEEGILPHKRSVDEEFENPSSVE 598 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 EERRL YVG+TRA LT+T +++R +GK+ +PSRF+ E+ Sbjct: 599 EERRLCYVGITRAKDFLTITRSQSRVKWGKKRETKPSRFLKEM 641 >UniRef50_C6NVE2 ATP-dependent DNA helicase Rep n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NVE2_9GAMM Length = 663 Score = 734 bits (1896), Expect = 0.0, Method: Composition-based stats. Identities = 259/646 (40%), Positives = 366/646 (56%), Gaps = 13/646 (2%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +S L LN QREAVA +LVLAGAGSGKTRV+ +I L+ P I AVTF Sbjct: 1 MSAALADLNGPQREAVARVHGPVLVLAGAGSGKTRVITRKIVHLIQDHGVEPRHIAAVTF 60 Query: 63 TNKAAAEMRHRIGQ-LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM+ R+ Q L G S G+ + TFH L +LR ++F ++D D L Sbjct: 61 TNKAAREMKGRVQQSLEGRSARGLTISTFHRLGLEILRQDITQLGYRENFSVVDPGDSLT 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 L++ L++ M I+ K++G P + + +++ Q+VY+ YQ A Sbjct: 121 LVRNLLREMQGPSD--LAESIQARISKAKNDGHGPEDM-PIRDRLDELAQRVYRPYQRAL 177 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 VD +L+L EL + ++ER +LVDE+QD+N QY ++ L Sbjct: 178 KACNSVDLDDLILLPTELLSRFAEAQERWQERIRYLLVDEYQDSNGAQYRLLQNLLKKRQ 237 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + VGDDDQSIY WRGA +N+QR DFP I+LEQNYRST IL AAN LI +N Sbjct: 238 NLTAVGDDDQSIYSWRGAAADNLQRLAQDFPDLRLIKLEQNYRSTGRILQAANHLIAHNP 297 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQS 360 KKLW+ +G+ I + A +E DEA VVN I + G + AILYRSN QS Sbjct: 298 HLFEKKLWSSLGEGDRIQVIVARDETDEAEQVVNAILRDRFQRQGEYRDYAILYRSNHQS 357 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R E AL A +PY++ GG+ FFER EI+D L+Y RL+AN +DDAAF R VNTP RGIG Sbjct: 358 RPFETALRNARIPYQLSGGISFFERSEIRDFLAYCRLLANPDDDAAFLRAVNTPRRGIGS 417 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 TL+ + + ++ RQ++L+ A ++ LA R AL+ F + ++ A+ A L Sbjct: 418 ATLETLGEHAKARQMSLFAAL--WEEDLDLAERPLLALRSFGDWLNRTAEACARSELMPT 475 Query: 481 TDRVIKDSGLRTMYEQEKGE-KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++++ G R E E E + + + ENLEEL+ + E+++ L L+ + Sbjct: 476 LRDLLEEIGYRRYLENEGDEREARRKWENLEELLAWMARLL--EQEDGPKNLAELLNRLS 533 Query: 540 L--EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 + + D +D ++L TLH AKGLEF +VF+VG+EE + P + S + ++EEERR Sbjct: 534 VIHILERDEDDEERDVLRLSTLHGAKGLEFSRVFLVGVEEELLPHRNS-ETPAQIEEERR 592 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEE 643 L YVGVTRA KL+L+Y R+ YG+ PSRF+ ELP E ++ Sbjct: 593 LFYVGVTRARHKLSLSYCRRRKRYGEAQAPEPSRFLQELPRELLDW 638 >UniRef50_C3JBX6 ATP-dependent DNA helicase PcrA n=2 Tax=Bacteria RepID=C3JBX6_9PORP Length = 809 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 240/662 (36%), Positives = 359/662 (54%), Gaps = 24/662 (3%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LN Q EAV LV+AGAGSGKTRVL +++A L+ P+ +MA+TF Sbjct: 1 MIDYEKELNPAQAEAVLYDDGPALVIAGAGSGKTRVLTYKLAHLLEE-GYDPHKLMALTF 59 Query: 63 TNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 TNKAA EM R+ ++G M +GTFH + R LR + +F I D+ D Sbjct: 60 TNKAAREMLSRVESMVGSRDTFRMKLGTFHSVFSRYLRIYAPLLGFTPNFSIYDTSDSKS 119 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VY 174 L+KR++K M LD K + P+ + I+ K+ + P + G E +++ VY Sbjct: 120 LVKRIVKDMALDPKFYTPKLVLGRISHCKNNLITPEGYAAGGEYAEYDYRRGVPMLHSVY 179 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 AY C +A +DF +LL + L + P + +L+DE+QDTN QY R Sbjct: 180 AAYVAQCRQANAMDFDDLLYYFNILLRDHPEVQAECAASVDYLLIDEYQDTNPSQYLIAR 239 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 L ++ VGDD QSIY +RGA ++NI F + FP A +LE+NYRS+ I++ AN Sbjct: 240 RLVEAKQRIFAVGDDAQSIYSFRGASMQNILTFTHTFPSARLFKLEENYRSSQRIVALAN 299 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI--KTWQDNGGALAECAI 352 +LIE+N R+ K ++++ A GE I LY + EA+ VV I + + + + AI Sbjct: 300 SLIEHNVHRIKKDVFSNRAKGEKIDLYEMESGYREAQHVVESIYKRYCKHSETSYGSFAI 359 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+NAQSR+ E+ L QA +PYRIYGG+ F+ R EIK+ L+YL+LIAN +++ AFER Sbjct: 360 LYRTNAQSRLFEDQLRQAGIPYRIYGGIAFYSRAEIKNVLAYLQLIANPHNNEAFERAAK 419 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKA-LAGRAASALQRFMELIDALAQE 471 P +GIGD+TL ++R + D + +L+ A L+ L+ A + L ++ELI + Sbjct: 420 YPRKGIGDKTLSLIRTEAADNKTSLFAAAESLIARPDTLSSTARTKLTAYLELIRDITYN 479 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL--- 528 L ++ S + + +G T++EN+ E V+ ++F + L Sbjct: 480 PEAKTLVEWVQSILLRSQILDTLRADTSIEGHTQLENVNEFVSGVQEFEDETSADGLFFE 539 Query: 529 --------MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 L FL L + DAV LMT+H+AKGLEF V+IVG+EEG+F Sbjct: 540 RGETTSLHDLLVLFLQGVTLITDNLETGENADAVHLMTIHAAKGLEFDHVYIVGLEEGLF 599 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 PS +S +E E ERRL YV +TRA + ++++A R + G Y PSRF+ +L Sbjct: 600 PSMLSAEEENIEE-ERRLLYVAITRAKEYCSISFARYRAINGMTEYMIPSRFLRDLDMRY 658 Query: 641 VE 642 + Sbjct: 659 LN 660 Score = 71.3 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 4/96 (4%) Query: 625 VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEG 684 + S F + + P S ++ + + + +G V+H FG G Sbjct: 716 SKKKESSF----APSLQGASGSKRAIPIPYSQRKAPKGAPKGVTKFSIGDIVQHPTFGRG 771 Query: 685 TIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 + ++ GE+S++QV F G K ++ +A L+ + Sbjct: 772 VVTSVLDKGENSKIQVNFDTAGEKTILIRFASLKKL 807 >UniRef50_A5FDD0 ATP-dependent DNA helicase, Rep family n=2 Tax=Flavobacteriaceae RepID=A5FDD0_FLAJ1 Length = 787 Score = 732 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 232/726 (31%), Positives = 385/726 (53%), Gaps = 21/726 (2%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M+ +L++LN Q +AV + V+AGAGSGKT+ L R A+++ + +I+ V Sbjct: 1 MN-DPILENLNPSQLQAVKTTEGYVRVIAGAGSGKTKALTSRFAYIVDRLGINSSNILCV 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ R+ L+G + ++ T+HG R LR + P++F ILD+EDQ Sbjct: 60 TFTNKAAQEMKKRVKALIGDTYDLAFITTYHGFCVRFLREEINKIHFPKNFIILDAEDQK 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDE----GLRPHHIQSYGNPVEQTWQKVYQA 176 +L+ + + ++ K +Q + +I+ QK G + +P + +++Q Sbjct: 120 SILRDIFNELQINSKHLTFKQVLRFISKQKSTSNYLGYILENKGFEPDPSDSLSSRIFQI 179 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y + R +DF +L+ + + P +L +++ I VDE QD++ Q+ + +L Sbjct: 180 YLDKLKRNYALDFDDLIHFTAFILDHNPDVLLKWQQNLHYIQVDEAQDSSENQFHLVEIL 239 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + + +VGD DQ+IY WRGA+ E + F + FP +TI + +NYRST NIL N + Sbjct: 240 SRVHQNLFLVGDPDQTIYEWRGAKPEYLVEFDSMFPDTQTIIMNRNYRSTPNILKIGNHI 299 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYR 355 I+NN R+ K + TD +G + + N+ +E++++ + IK Q A ++ ILYR Sbjct: 300 IKNNTVRVDKDMITDKPEGFEVVHFHGKNDFEESQWIASEIKEILQAEQAAYSDITILYR 359 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 SN SR +E+AL++ ++PY I+GG+RFFER+EIKD LS LRLI + D+ +F R+ N P Sbjct: 360 SNHLSRNIEQALIKDNIPYSIFGGIRFFERKEIKDVLSLLRLIV-QGDNFSFLRMHNHPA 418 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 RG+G + L+ + + ++ L+L QA + +K LA + A F+ELI L + Sbjct: 419 RGLGKKFLERLSLLAGEQNLSLLQALERNITDKELAKKGAV---EFLELIAELRETAKTK 475 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 + ++ SGL +Y ++ E R+EN++ELV + E+ + + +L Sbjct: 476 SISDLVKIILDKSGLSELYRKDGDED---RLENIKELVNSMLLLEK--ENNAPVDIIEYL 530 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE--GGRLE 593 +L QD V+LMT+H +KGLEFP VF+ G EG+ PS +S+ E +E Sbjct: 531 QEISLYTDLNTDTENQDKVKLMTIHISKGLEFPYVFLCGFTEGVLPSALSVKERRARAIE 590 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRP 653 EERRL YV VTRA ++ +T +E + + PSRF+ E+ +E + Sbjct: 591 EERRLMYVAVTRAEKRFYMTDSEG-FNFTTGLNKYPSRFLFEIKDEFYVRKGKLSQQIIE 649 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVA 712 S ++ ++ +K G V H + +G I ++ V F G +K + Sbjct: 650 NSRNHQSPGQLQENTAFKEGDFVMHPVWNKGKIQTVDLE--KKEYLVDFFDMGKVKPIDF 707 Query: 713 AYARLE 718 + L Sbjct: 708 GFKHLT 713 >UniRef50_Q6KHF5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma mobile RepID=Q6KHF5_MYCMO Length = 723 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 246/727 (33%), Positives = 377/727 (51%), Gaps = 21/727 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LLDSLN Q+ AV S L ++AGAGSGKTRVLVH+IA+L+ N PY I+AVTFT Sbjct: 6 KNLLDSLNKDQKLAVVFNDSPLRIIAGAGSGKTRVLVHKIAYLIQKMNVKPYQILAVTFT 65 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NKAA EM+ RI L+ + + TFH L +LR P++F ILD DQ +L Sbjct: 66 NKAANEMKERIKTLVDNHESEPLISTFHALCVYILRRDIDVLKYPKNFTILDVADQFDIL 125 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ-KVYQAYQEACD 182 K + + ++++ + YI+ K +++ N + + K+Y Y E Sbjct: 126 KNIYEKFDINKIDITLTSMINYISFHKINKTPIEVLETEDNSEDDRIKLKIYLEYNEILK 185 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + L+DF +LLL+ EL+ P I + RF ILVDEFQDT+ IQY I+ LA + Sbjct: 186 KLALLDFNDLLLKTQELFEKFPEIKLKWSRRFKYILVDEFQDTSPIQYEIIKTLAQNH-N 244 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRGA V I F DF A+TI L NYRST IL AN+LI N Sbjct: 245 LTIVGDPDQTIYSWRGANVNLILDFHKDFENAKTINLNLNYRSTEKILKHANSLIHFNKK 304 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSR 361 RL K L G+ + + A + EAR+VV++IK L+E +I+YR+N S+ Sbjct: 305 RLEKDLVAYTKQGQEVIFHHALSPELEARWVVDKIKWLISIEKAKLSEISIIYRANFYSK 364 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 E+ALL+ S+ ++++GG +F+ER EIK+ALSY++L+ + +D AF+R++N P R IG+ Sbjct: 365 NFEDALLRESIHHQVHGGEKFYERSEIKNALSYIKLLVSDSD-LAFQRILNIPQRSIGNI 423 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 + + + L+++QA L++ ++ L + I+ + + + V Sbjct: 424 YRNKILDYCDESNLSIFQAINNHLEDLPVSSNIREKLFDLIFKINKYQKIINENNVQVSV 483 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 D D E K +++N++EL+ + N + Q + +L Sbjct: 484 DEFFADIKYYDYLANEDTFKNG-KVDNVKELLIIISNWFRNNPKKT---FQDYFEEISLV 539 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD---EGGRLEEERRL 598 Q D ++ V LM +H+ KGLEF VF+VG+ E + PS+ +L+ + LEEERRL Sbjct: 540 PNASQEDD-KNTVSLMNIHNCKGLEFSYVFLVGLSEEILPSKKALENDFDDSNLEEERRL 598 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV---- 654 AYV +TRA + L LT ++ + + SRFIGE+ E + Sbjct: 599 AYVAITRAKKMLFLTDSDGYLFGNFKTQKKTSRFIGEMGIVLENENQKTMEQYMNSVLLN 658 Query: 655 SHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG-QGIKWLVAA 713 + N+ +G ++ H FGEG ++ ++ V F + K L+ Sbjct: 659 KQVDLMKDYQTNNDDIFVGDKIVHKVFGEGIVL----EESLGQITVLFTNKKQPKTLLKN 714 Query: 714 YARLESV 720 +A + + Sbjct: 715 HASISKI 721 >UniRef50_Q3F0Y3 ATP-dependent DNA helicase pcrA n=2 Tax=Bacillus thuringiensis RepID=Q3F0Y3_BACTI Length = 653 Score = 731 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 219/647 (33%), Positives = 358/647 (55%), Gaps = 18/647 (2%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 + L+ +LN Q+ AV +LVLAGAGSGKT+VL RIA+L+ + P+ I+A+TFT Sbjct: 7 NPLMGTLNSSQQRAVLTTEGRVLVLAGAGSGKTKVLTTRIAYLL-QQGVDPWRILAITFT 65 Query: 64 NKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 NK+A EM+ R+ + + W+GTFH + +R+L + + F ++D DQ L+ Sbjct: 66 NKSAKEMKERVTGM-DSRASKSWIGTFHSICNRILSTNIHHLGMDM-FTLMDDTDQKALV 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQ--KVYQAYQEAC 181 K + L+ + + I+ K+E + P QS ++ +YQ Y++ Sbjct: 124 KTAAVQLGLEADKNIVYNLLSQISLWKNEAISPGQAQSNSTGDKEKLAVSHIYQKYEDLK 183 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 D+ +LLL+ L+ N P +L Y+ F +LVDEFQDTN IQ+ I +L+ G Sbjct: 184 AIHNYFDYDDLLLKTVHLFQNNPELLGRYQNLFRYVLVDEFQDTNKIQFDLIEMLSQKHG 243 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGD DQSIY +R A++ENI + P + I L++NYRST NI++A+N+L+ NN Sbjct: 244 NIFLVGDADQSIYSFRSAKIENILSYQKIHPETQLILLQENYRSTQNIVNASNSLVGNNK 303 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN-GGALAECAILYRSNAQS 360 RL ++ ++ G+ I ++ + EA FV I + + A+LYR N QS Sbjct: 304 MRLEREAFSVSGVGDDIHVFRFNDASREADFVARMIVNMKKATQCDWKDFAVLYRMNFQS 363 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 + LE AL ++PY+I G F++R+EIKD +SY+R N DD A ERV+N P+R IG Sbjct: 364 KHLELALRDENIPYKIVGTTSFYDRKEIKDLVSYIRASHNLTDDYALERVINVPSRKIGK 423 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALA---GRAASALQRFMELIDALAQET--ADM 475 T++ + + +R++ + A + + + AL+ + ++ F L+ L+Q + Sbjct: 424 TTIEKIYAFAHERRIPFFVALQNIDEVAALSKINKSTVAKIKEFATLMQELSQLALVGEF 483 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 +IK + +++E E+ +TRIEN+ L R + E +++ L F+ Sbjct: 484 SATKFMQTLIKKTDFMGQFDKE-KEEDETRIENVTHLRDYARHWDAQE--KEINSLAQFV 540 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 S L+ + + V L ++HSAKGLE+P+ F++G+E+ +FP S + LEEE Sbjct: 541 SEITLDGDSDEDEED--FVTLTSVHSAKGLEWPETFVIGLEDDVFPHYRSKQKLSDLEEE 598 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVY--HRPSRFIGELPEEC 640 RRL YV +TRA ++L LT++ + YG + +PS F+GE+P+ Sbjct: 599 RRLMYVAMTRAGKRLYLTHSAFKYEYGSQKPIRQKPSPFLGEIPDNY 645 >UniRef50_B3PNG5 ATP-dependent DNA helicase n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PNG5_MYCA5 Length = 726 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 243/743 (32%), Positives = 390/743 (52%), Gaps = 51/743 (6%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 DSLN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ N SP I+A+TF+NKA Sbjct: 6 FDSLNEQQKSAVIFTDGALRIIAGAGSGKTRVLTYKIAYLIENRNVSPGDILALTFSNKA 65 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 A EMR R + + V TFH L R+LR+ + + P DFQILD DQ ++LK + Sbjct: 66 ANEMRDRAYGALEKTNEYPTVSTFHSLCARILRSEIHNFDYPNDFQILDESDQKQVLKIV 125 Query: 127 IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGL 186 + + + Q+ + +I +QK+ + P + + + + +Y++YQE + A Sbjct: 126 YTELGISQAQYTFGSIISFIQNQKNNLVAPEDLLADEDSAKDPRTLIYKSYQERLNNAHS 185 Query: 187 VDFAELLLRAHELWLN--KPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 +DF +LL+ + L+ + I + +RF +L+DEFQDT+ +QY +++LAG +G + Sbjct: 186 LDFDDLLVFVYRLFYDPKFEEISHKWSKRFKYLLIDEFQDTSELQYKIVKILAG-SGNIT 244 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 +VGD DQ+IY WR A + I F DFP A TI+LEQNYRST IL+AAN LI N RL Sbjct: 245 VVGDPDQTIYSWRNADINIIMNFDKDFPEAVTIKLEQNYRSTKKILNAANNLISYNKFRL 304 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 KKL+TD +GE I YC F+E EAR + ++I + L AIL+R ++ SR +E Sbjct: 305 DKKLFTDNEEGEDIDFYCGFSEEAEARKIASKISELKRKRVQLKNIAILFRISSYSRAIE 364 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 EAL+ + Y+++G +F++R+E+KDAL+YLR+I + + + RV+N P R IG T+D Sbjct: 365 EALINENTIYKLFGSTKFYQREEVKDALAYLRVIHD-GSEISLLRVINKPARRIGTSTID 423 Query: 425 VVRQTSRDRQLTLWQACR----ELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 + + S++ L L++ E+ + + L + I + +++ Sbjct: 424 KLLKFSKENNLDLFKCLDTKFNEIQKNLHIQMETLKNLASLINEIRWARRIIQGNQIYLT 483 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL 540 + ++ + E+ + R+EN L+ A + + +L L Sbjct: 484 LKEFMINNIKYFEEYKSSEEEYENRMENFLNLIEAIHVWETKHPHGT---IDEYLQEITL 540 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL-------------- 586 D V LMT+H+AKGLEF VF+VG+ E +FP + ++ Sbjct: 541 ITDRDVEDDAASYVSLMTIHNAKGLEFDYVFVVGLSEDIFPLRRAITISPKFDFTYLPFE 600 Query: 587 ---------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELP 637 + LEEERRLAYV +TRA KL L+YA RR ++PSRF+ E Sbjct: 601 KEEELQKQPENIEGLEEERRLAYVAMTRARTKLFLSYAVNRRG-----LNKPSRFLKEAG 655 Query: 638 EECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSR 697 ++ T S + ++ + +G + H+ +G G I+N+ G Sbjct: 656 --------IKKTSSIQTASSFSQAMDIDENVNLIVGDEISHSTYGHGKILNIIGK----I 703 Query: 698 LQVAFQGQGIKWLVAAYARLESV 720 ++V F + I+ L + ++ + Sbjct: 704 IEVQFDDKKIRKLDKTHIAIKKL 726 >UniRef50_Q2STJ5 ATP-dependent DNA helicase Rep n=90 Tax=Bacteria RepID=Q2STJ5_BURTA Length = 848 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 234/687 (34%), Positives = 340/687 (49%), Gaps = 42/687 (6%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN Q EAV LVLAGAGSGKTRV+ +IA L+ + P I AVTFTNKAA Sbjct: 156 AGLNPAQSEAVRYLDGPCLVLAGAGSGKTRVITQKIAHLIEAKGFEPRHIAAVTFTNKAA 215 Query: 68 AEMRHRIGQLMGTS-------------QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQIL 114 AEMR R+G+L+ + V TFH L ++LR L F I+ Sbjct: 216 AEMRERVGKLLEGKTLTTPGKEGRKVPVNQLTVCTFHSLGVQILRQEAEHVGLKPQFSIM 275 Query: 115 DSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS-YGNPVEQTWQKV 173 DS+D +++ I + R+ I+ K+ + P + N E V Sbjct: 276 DSDDCFGMIQEQIG----TTDKGLIRKIQTIISLWKNGLVTPEEAMTIAANEDEHQAALV 331 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+ Y VDF +L+ EL+ + ++ R +L+DE+QDTN QY + Sbjct: 332 YRNYVATLHAYQAVDFDDLIRLPTELFAKNEPVRDRWQNRLRYLLIDEYQDTNACQYELL 391 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 +LLAG VGDDDQ+IYGWRGA +EN+ + DFP I+LEQNYRST IL+AA Sbjct: 392 KLLAGPRAAFTAVGDDDQAIYGWRGATLENLAQLGKDFPKLHVIKLEQNYRSTVRILTAA 451 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAI 352 N +I NN KKLW++ G+ I++ +E EA VV R+ + + + AI Sbjct: 452 NNVIANNPKLFEKKLWSEHGMGDSITVTPCNDEEHEAESVVFRLSAHKFERRTQFRDYAI 511 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR N Q+R+ E+ L + +PY + GG FF++ EIKD +YLRLIAN +DD AF R V Sbjct: 512 LYRGNFQARIFEQVLRRERIPYVLSGGQSFFDKAEIKDLCAYLRLIANADDDPAFIRAVT 571 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP RGIG+ TL+ + + +++L++A E L+ R L+ F + I L Sbjct: 572 TPRRGIGNTTLEALGAFAGQAKVSLFEAVYMGGIEARLSARQIEPLRIFCDFIQRLTDRA 631 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGE-KGQTRIENLEELVTATRQFSYNEEDEDL--- 528 P V D +++ E + QT+ +N+ E + ++ E ++ Sbjct: 632 DKEPATVVLDDMMEAIHYEAYLYDAYDERQAQTKWQNVLEFLEWLKRKGTKPEPDEAVDG 691 Query: 529 ---------------MPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIV 573 L + AL + + DAV+L T+H++KGLE+P VF+V Sbjct: 692 EAEGFHNADGLADTGKNLLGLIQTVALMSMLEGKEEDPDAVRLSTVHASKGLEYPHVFLV 751 Query: 574 GMEEGMFPSQMSLDEG----GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRP 629 G+EEG+ P D+G R+EEERRL YV +TRA + L L + + R+ + + Sbjct: 752 GVEEGIMPHSGGSDDGPIDDERIEEERRLMYVAITRAQRSLHLNWCKKRKRARETIVCEQ 811 Query: 630 SRFIGELPEECVEEVRLRATVSRPVSH 656 SRFI E+ + P Sbjct: 812 SRFIAEMGLDEAPPPTPEEAPMTPKDR 838 >UniRef50_Q30TG3 UvrD/REP helicase n=8 Tax=Epsilonproteobacteria RepID=Q30TG3_SULDN Length = 682 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 226/717 (31%), Positives = 373/717 (52%), Gaps = 44/717 (6%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + + + LN+ Q +AV +L+LAGAGSGKT +V R+A+L+ + + +TF Sbjct: 1 MEKIFEKLNNSQTDAVKQTEGPVLILAGAGSGKTTTIVSRLAYLIEGIGIPASNTLTLTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R +M + TFH L+ + +F ++DS+D+ R+ Sbjct: 61 TNKAAKEMRERASNMMSNLAYPPLLCTFHKFGLLFLKFNIHLLGRQNNFVVIDSDDKKRI 120 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVE-QTWQKVYQAYQEAC 181 +K++ + I+ K+ L P Q K+Y+ Y+ Sbjct: 121 IKKI-------NSELATPLIASEISRYKNSLLTPDDAYKQAEFFNYQQIAKIYEEYENYL 173 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 LVDF +L+ +L P + + +++ I+VDE+QDTN +Q ++ L Sbjct: 174 LENNLVDFDDLIALTFKLLDENPELARTTSDKYRYIMVDEYQDTNELQLKLLQKLCSTHN 233 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + +VGDDDQSIYGWRGA + NI F DF G +LE+NYRS IL ANALIE+N Sbjct: 234 NICVVGDDDQSIYGWRGAHIRNIMEFDQDFIGTSVFKLEENYRSREPILKVANALIEHNR 293 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 RLGKKL GE I++ + +E +EAR + ++ D+G + A+LYR N SR Sbjct: 294 SRLGKKLIPTRGGGEDITILNSSDENEEARKIATKVNKLLDSGVKAEDIAVLYRVNVLSR 353 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 +E+ L +A + Y++ GG+RF++R EIKD +SYLR+I N +DD +F+R+VN P RG+G Sbjct: 354 SIEDGLNRAGIAYKLVGGLRFYDRAEIKDLISYLRVITNFHDDFSFKRIVNKPKRGMGKA 413 Query: 422 TLDVVRQTSRDRQLTLWQACRELL---QEKALAGRAASALQRFMELIDALAQETADMPLH 478 ++D + + + ++++ ++ E + + A L++F++ I ++A + + Sbjct: 414 SVDKIELAAHANETSIFEYIEKIAITDLETLVKSKNAKTLKKFVKDIRSVANAAKESTYN 473 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 +++D+ + ++ R+ N++E R F N L FL+ Sbjct: 474 FI--DILEDTFHLKDIYKGLPDE-VERVLNMDEFYGLFRDFIKNSPS---ASLDEFLNEL 527 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L++ + Q + D++ +M++H++KGLEF +FI+G+EEG P + +G LEEERRL Sbjct: 528 TLQSEQDQVEG--DSIYMMSIHASKGLEFDHIFIIGLEEGFLPL---VGDGSDLEEERRL 582 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV TRA LTL++ ++R G+ + SRF E + Sbjct: 583 GYVSFTRAKDTLTLSHVDSRFYKGRRSDLQKSRFFNE-------------------AGLC 623 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKW-LVAAY 714 G+ +VE ++ +K G VRH FG G + + SG +L + F G K ++A++ Sbjct: 624 EGSLIVEKNTAFKKGDLVRHKIFGTGRVNGVSKSGREFKLNINF--AGTKRDILASF 678 >UniRef50_B0RZ36 ATP-dependent DNA helicase n=21 Tax=Bacteria RepID=B0RZ36_XANCB Length = 658 Score = 726 bits (1874), Expect = 0.0, Method: Composition-based stats. Identities = 239/660 (36%), Positives = 351/660 (53%), Gaps = 17/660 (2%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + LN Q AV LLVLAGAGSGKTRV+V +IA L+++ I A+TFTNK+ Sbjct: 1 MHGLNPPQSAAVLHCEGPLLVLAGAGSGKTRVIVEKIAHLIAIGRYPAKRIAAITFTNKS 60 Query: 67 AAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EMR R+ + + G G+ + TFH L + L+ H A L + F I DS+D +K Sbjct: 61 AKEMRERVAKRIRGDGADGLTICTFHALGLKFLQIEHAAAGLKRGFSIFDSDDAAAQIKD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRA 184 L+ K A I+ K+ G+ P + + + E+ +Y+ YQ Sbjct: 121 LMH----GAKPDAIEDAKNLISRAKNAGMSPEQAMAAARSNREKEAASLYERYQARLTTF 176 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 VDF +L+ ++ I+ +RER +LVDE QDTN+ QY +++LAG G Sbjct: 177 NAVDFDDLIRLPVQILEANEEIVMGWRERIGYLLVDECQDTNDAQYRLLKMLAGPRGNFT 236 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY WRGA EN+Q+ D+P E I+LEQNYR ++ +L AANALI +N Sbjct: 237 CVGDDDQSIYAWRGANPENLQQMGRDYPALEIIKLEQNYRCSNRVLRAANALIAHNPHEH 296 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAILYRSNAQSRVL 363 K LW+D ADGE I ++ + EA V I ++ IL+R N QSR L Sbjct: 297 LKTLWSDQADGERIRVWECRDSEHEAEKVAAEISFLGTAKQVPWSDFCILFRGNFQSRPL 356 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+AL +PY + GG F ERQE+KD LS+LRLI N DDAAF R V +P R +G +L Sbjct: 357 EKALQLLRVPYHLTGGTAFLERQEVKDVLSWLRLIVNPEDDAAFLRAVQSPKREVGATSL 416 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + + + + + + +A + + L RAA+ L F +++ + + +A +P Sbjct: 417 ARLAELASAKSVPMSRAAESMGALQHLPPRAANGLSAFTDILRDMREHSATLPAGELVRT 476 Query: 484 VIKDSGLRTMYEQEKGEKG--QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 + SGL + ++ Q R NL+EL E + AL Sbjct: 477 LADKSGLLNDLRNQSKDEAGFQRRKRNLDELAEWF------EGGPRGASASDLAAQLALL 530 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 + + D + V++MT+H++KGLEF VFIVG E+G+ P ++SL+E G L+EERRL YV Sbjct: 531 SRNDKDDGG-NQVRMMTMHASKGLEFRYVFIVGCEDGVLPHEVSLEE-GNLQEERRLLYV 588 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA Q+L ++Y++ R +G+ V +PSRF E+P ++ +R Sbjct: 589 GITRAKQQLWMSYSKLTRKFGEHVRLKPSRFFDEIPAAELQRDGADPVADAERKKERANA 648 >UniRef50_B1AJE0 ATP-dependent DNA helicase PcrA n=15 Tax=Ureaplasma RepID=B1AJE0_UREP2 Length = 743 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 228/747 (30%), Positives = 384/747 (51%), Gaps = 49/747 (6%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN +Q+EAV A LV+AGAG+GKT VL RIA+L++ +N P I+ TFTNKAA Sbjct: 8 SRLNQEQKEAVTADLGPQLVIAGAGTGKTSVLTLRIAYLITEKNIHPSRILGFTFTNKAA 67 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+G+ +G S ++ TFH + ++L+ N + +I+D++DQ LLK + Sbjct: 68 DEMKERVGKTIGVSI--PYLSTFHSMCVKILQQDIHYLNYHNNIKIIDTDDQEVLLKEIF 125 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP---------VEQTWQKVYQAYQ 178 +N+++K ++ + I+ K++ + + + N Q +Y+ Y Sbjct: 126 DQLNIEKKSQVIKKIIKTISKVKNKFFDQNDMLNEKNHKYLELVDLNDAQRLVDIYKIYC 185 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + C + VDF +L+ H+L++ P +L+ ++ +F ILVDEFQDTN IQY I LLA Sbjct: 186 DRCFKLNYVDFDDLINLTHKLFIEFPEVLEKWQNKFDYILVDEFQDTNKIQYDLISLLAT 245 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQ IY +RGA+ I F +F + L+ NYRST IL+ AN LI+ Sbjct: 246 KHQNLFVVGDPDQMIYSFRGAEQWIINNFSQNFKNTKVTILKTNYRSTQPILNTANRLID 305 Query: 299 NNNGRLGKKLWTDGA-DGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 NN K L D N +DEA ++ +I+ + G + A+L+RSN Sbjct: 306 ANNNNYKKNLTAFNTNDNNLPIYLRGQNPIDEANWIARKIRELLEEGTPANQIAVLFRSN 365 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 SR +E+++++ S+PY I G +F+ER EIKD ++YL+++ N D+ +F R++NTP R Sbjct: 366 HYSRTIEQSMMRESIPYTILGSKKFYERAEIKDMIAYLKVV-NDLDELSFLRIINTPRRA 424 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG T + V+ + + L L++A E+ + + + F+ LI + E D+ + Sbjct: 425 IGPTTFEHVKHYAINNNLFLFEALAEVEKNHLINNTQKKNILNFVNLIKEIRDEMEDLKI 484 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 H + + K + EK + +I+N+ EL A + + D+ + +L+ Sbjct: 485 HEILELIYKKVNYEAYLLE--NEKAEDKIDNVYELKRAMKMYVDRHPDDT---INDYLNS 539 Query: 538 AALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG--GRLEEE 595 AL + D+ ++ V LMT+H++KGLE+ VF+ GM EG+ PS ++++ +EEE Sbjct: 540 IALYLNKDGKDSKEN-VLLMTVHNSKGLEYENVFVAGMNEGLLPSDRAINDDPIKGVEEE 598 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL----------------PEE 639 RR+AYV +TRA + L ++ A + SRFI E+ PE+ Sbjct: 599 RRIAYVALTRAKKNLYISSACCYDPLARRQVFE-SRFINEIGFNNLKIINSSFKNNKPED 657 Query: 640 ------CVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSG 693 ++ S+ + + +++G+R+ H FG+G I+ ++G Sbjct: 658 MPLKSFLKQQEERSWFDSKQKQKEVEDNFYQTMKNDFEIGERIVHTSFGDGVIIGIDGD- 716 Query: 694 EHSRLQVAFQGQ-GIKWLVAAYARLES 719 L +AF K + + + Sbjct: 717 ---ILTIAFSKYRQPKQINFNHKTIVR 740 >UniRef50_Q8EUN0 ATP-dependent DNA helicase n=1 Tax=Mycoplasma penetrans RepID=Q8EUN0_MYCPE Length = 738 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 240/746 (32%), Positives = 401/746 (53%), Gaps = 46/746 (6%) Query: 6 LLDSLNDKQREAVAAPRS-NLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + DS N+KQ EA+ AP L+V+AGAGSGKT VL +R +L++ N I+ TFTN Sbjct: 5 IYDSFNEKQYEAITAPDDVPLMVIAGAGSGKTAVLTYRAVYLLNELNYVSDRILGFTFTN 64 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQ---DFQILDSEDQLR 121 KAA EM+ RI +++ ++GTFH + R+LR + N+ + +F I+D +DQ Sbjct: 65 KAANEMKDRITKVIPNRSFK-YIGTFHSVCLRILREDIKELNIGKINSNFTIIDEDDQNS 123 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGL-RPHHIQSYGNPVE---------QTWQ 171 +LK + K N D++ + + +I+ K + + + + + + ++ + Sbjct: 124 ILKEIYKLNNFDKQILNYKVCLSWISKLKSDNIYDANDVYEWLSFLDNTYDGKVKKDIFA 183 Query: 172 KVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 VY+ Y L+DF +L+ A + I ++ RF ILVDEFQDTN QY Sbjct: 184 AVYEGYINFLRDGNLLDFDDLIKYARRVL-EIEEIRTKWQNRFDYILVDEFQDTNYDQYQ 242 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 I+LL+ + + VGD DQ IY WRGAQ + F DF + TI LE+NYRST NIL+ Sbjct: 243 IIKLLSKNFKNIFAVGDPDQMIYSWRGAQENIFEVFKKDFSDSLTIVLEKNYRSTKNILN 302 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAEC 350 AN+LI+ N R+ K L+TD + I + A ++ E++FV RIK D + Sbjct: 303 IANSLIQKNKNRIKKNLYTDSSTESEIIYFEADDQNLESKFVCTRIKDLVDSKKYNYKDI 362 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR+N SR +EE L +PYRI+GG +F++R+E+KD ++Y++LI N +D+ + R+ Sbjct: 363 AILYRANYLSRNIEEFLSNYRIPYRIFGGFKFYQRKEVKDIIAYMKLIVN-SDEVSLTRI 421 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 NTP R I + T ++ + ++ + A + + + + + R +A++ F + + + + Sbjct: 422 YNTPRRQISEATYFKIKNYAVLNNISTFAAFKFVDEIEGIQTRTKNAVKAFYDSMIEIRE 481 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 + + D +++ + M +++ E R EN+ EL A++ F N ++ Sbjct: 482 K-KYGSISEMIDDIVEKTKYYEMLKEDGEEH---RTENIIELKNASKNFEQNNPGSNINF 537 Query: 531 LQAFLSHAALEAGEGQADTW---QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 +L AL + + QD+V LMT+H++KGLEF VFI+ E +FPS SL+ Sbjct: 538 ---YLQELALLTSNDEEENQKNKQDSVSLMTVHASKGLEFKIVFIIQFNENIFPSIRSLE 594 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRL 646 E G L+EERR+AYV +TRA + L ++ +G +E+ PSRFI E+ + +E+ + Sbjct: 595 E-GNLDEERRIAYVAITRAKENLYISCCNGTSFFGNREMEREPSRFISEIGDALIEKRLI 653 Query: 647 RATVSRPVSHQRMGT----------PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHS 696 ++ + + E++ Y +G+ + H KFGEG ++N+ G+ Sbjct: 654 TKNQTKFKASTQFNNSNNGSKVDHSKFHESEKTYYVGELIIHDKFGEGIVLNVSGN---- 709 Query: 697 RLQVAFQG--QGIKWLVAAYARLESV 720 + V+F+ G K + + + S+ Sbjct: 710 IIDVSFKNPQYGKKSFLKQHVSIRSL 735 >UniRef50_C5TB61 UvrD/REP helicase n=3 Tax=cellular organisms RepID=C5TB61_ACIDE Length = 778 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 229/660 (34%), Positives = 337/660 (51%), Gaps = 32/660 (4%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN Q +AV + LVLAGAGSGKTRV+ H+IA ++ + P I A+TFTNKAA Sbjct: 90 AGLNLAQLQAVHYTQGACLVLAGAGSGKTRVITHKIAHMI-EQGLEPRRIAAITFTNKAA 148 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 AEMR R L+G + V TFH L R++R L F I+D++D +LK Sbjct: 149 AEMRERAKGLIGRRAKDVLVCTFHALGVRMVREDGAVLGLKPQFSIMDADDVAGILKDAA 208 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEACDRAGL 186 RQ W I+ K+ GL + + E++ V Y+E Sbjct: 209 ---GGTTDLATARQWQWTISKWKNMGLSSEQALAQAADDNERSIAVVMARYEERLAAYQS 265 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 VDF +L+ L + P + ++ ++LVDE+QDTN QY ++LL G+ G V Sbjct: 266 VDFDDLISMPLRLLRDHPEVRAKWQALLGHVLVDEYQDTNATQYELLKLLVGERGHFTAV 325 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIYGWRGA ++N+++ DFP + I+LEQNYRSTS IL AAN +I N K Sbjct: 326 GDDDQSIYGWRGATLDNLKKLPQDFPQLKVIKLEQNYRSTSAILRAANNVIGPNPKLFPK 385 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAE---CAILYRSNAQSRVL 363 L+++ +GEP+ + A E EA V RI++ + + AILYR+N Q++ Sbjct: 386 TLFSELGEGEPVRVVDADTEEHEAERAVARIQSLRAASNPPPDWKSFAILYRANHQAKPF 445 Query: 364 EEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E+AL +A++PY++ GG FF+R EIKD ++ RL N +DD AF R + P RGIG TL Sbjct: 446 EKALRRANIPYKVSGGTSFFDRAEIKDLCAWFRLWINNDDDPAFLRAIGNPKRGIGHTTL 505 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL----AQETADMPLHV 479 + + + +++ A + A+ RA L F I+ L Sbjct: 506 AALGAFATQHKQSMFGALFNGMLPAAVPKRALDGLHEFGRYINDLEHRARHTHGAEDARA 565 Query: 480 QTDRVIKDSGLRTMYE--QEKGEKGQTRIENLEELVTATRQFSYNEEDE--------DLM 529 +K+ G ++ + R N+ E Q + + D+ + Sbjct: 566 FLADWLKEIGYEQHLYDGEDSEKVAAARWSNVMEFCDWMAQRAGGQIDDTAGAVVARETK 625 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 L AL + + + QD V L TLH++KGLE+P V +VG+ EGM P ++ DEG Sbjct: 626 SLLEVSQTIALLSTISEREKEQDMVTLSTLHASKGLEWPHVVLVGVTEGMLPFKLDDDEG 685 Query: 590 ----------GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEE 639 RL+EERRL YVG+TRA + L +++ + R+ + V +PSRFI E+ + Sbjct: 686 RQQKVTDDTLQRLQEERRLMYVGITRAQRTLAVSWTKKRKKGREMVAAQPSRFIAEMGLD 745 >UniRef50_C6HUX3 Putative ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HUX3_9BACT Length = 796 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 244/771 (31%), Positives = 369/771 (47%), Gaps = 66/771 (8%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +QR AV LLVLA AGSGKTRV++ R+ +L+ S TFT KAA Sbjct: 20 GLNPEQRLAVTHEEGPLLVLAPAGSGKTRVVIERLLFLIERSGRGGESFFVATFTRKAAR 79 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 E+ RI + +VGTFH L+ RLLR A LP DF + D+ DQ L++ +++ Sbjct: 80 ELVERISHRLP-DARLPYVGTFHSLSARLLRRLADRAGLPPDFTVSDAGDQKALVREIMR 138 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPH-HIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 + E+ P++ + I+ K+ P + + Y+ Y+E + + Sbjct: 139 RHKVSEEDVAPQEILRQISQWKNARQTPGPELARRLFGSRRFMATCYEEYEEGLRKNRSL 198 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 D+ +LL R L ++P + R+ F +ILVDE+QDTN +Q IRLL+ + V +VG Sbjct: 199 DYDDLLCRLVGLLSSQPDVATALRQEFHHILVDEYQDTNPLQEELIRLLSRERRNVTVVG 258 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY +RGA+V +IQRF + +PGA + L +NYRSTS I+ +A ++I N+GR K Sbjct: 259 DDDQSIYRFRGAEVAHIQRFSDHYPGAGRVLLSRNYRSTSAIVDSATSVIRKNDGRYMKT 318 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 + G P+ L +E EAR V ++ W GG + A+L+R+NAQS LE+A+ Sbjct: 319 VTAVRGGGSPVLLMEFPDEEAEARGVAGILREWIAGGGRPSRAAVLFRTNAQSLPLEKAM 378 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 A +P+ GG E +E +D ++YLRL+ N D + R+ N P RG GD ++ + Sbjct: 379 AAAGVPFFRPGGGGLLESREARDLVAYLRLLVNPFDRLSLARIFNVPPRGQGDEAVEELS 438 Query: 428 QTSRDR-QLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV-QTDRVI 485 S +L + + L + L + L+ ++ + + + DRV+ Sbjct: 439 ALSEAHPELPVAELLERLAERGG----RREPLGKLSALLREGSEAASRGDVPLSLLDRVV 494 Query: 486 KDSGLRTMYEQEKGEKG-QTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 +G R +EK E+ + R+E LEE F E+ E PL AFL L + E Sbjct: 495 AATGYREWLTREKDEETRRRRLETLEEFRGLAGDFVREEDREASGPLAAFLEDLTL-SRE 553 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM--SLDEGGRLEEERRLAYVG 602 G ++ V LMT+H +KGLEF V + G+E+ + P + +EEERRL YV Sbjct: 554 GPDAEGRERVGLMTIHQSKGLEFDCVVVAGLEDQLLPFRSFAGGRSSTDIEEERRLFYVA 613 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV--------------------- 641 +TRA ++L LT+A TRR+YGK PS F+ ++P E Sbjct: 614 MTRARERLHLTWARTRRIYGKTQSFGPSPFLRDIPGELSAGDRPVFVRAPSAPSSSGRLP 673 Query: 642 --------------------------EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQR 675 R + V ++ E + G+R Sbjct: 674 GQSRDGGSGFSPSFGHPSRRDRLASPSVGRPVFRGASKVERRQGEPSPAEGPASISGGER 733 Query: 676 -------VRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLES 719 VRH +FGEG +++ L V F + L+A A L Sbjct: 734 KDWIGKKVRHPRFGEGVVLDARSPDPDLELVVRFSEGPPRTLLARLANLTP 784 >UniRef50_Q98PM4 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PM4_MYCPU Length = 734 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 227/742 (30%), Positives = 373/742 (50%), Gaps = 37/742 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L +LN +Q+EAV + L ++AGAGSGKTRV+ +IA+L+ E +P+ I+ +TFTNK Sbjct: 1 MLSNLNQRQKEAVVYTKGPLRIIAGAGSGKTRVITSKIAYLIEHEKIAPWKILGLTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM+ R +++G + + TFH L + +L+ P++F+I+D D+ ++LK Sbjct: 61 AAREMKERALKMIGPKASHVELSTFHSLCNVILKQDIDKIGYPKNFEIVDESDKKQILKG 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPH---HIQSYGNPVEQTWQKVYQAYQEACD 182 + + + K A YI K + + + +Y+ Y Sbjct: 121 IYLELAITTKDVSIWDAFDYIAKMKKNKYFSSIEEELDNENEEDLALLKNIYKGYVSYLK 180 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 + L+DF +L++ +EL+ + Q + ++ +LVDEFQDT+ IQY +++LA Sbjct: 181 KQSLLDFDDLIILTYELFSSSDLTRQKWASKYDYVLVDEFQDTSFIQYEIVKVLAS-NKN 239 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRG+ + F DF +TI EQNYRST NIL AN LI+NN Sbjct: 240 ITIVGDPDQNIYSWRGSDFRIMLNFDKDFENTKTINFEQNYRSTPNILEIANKLIKNNKN 299 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R+ K L++ A G +N EA+++V +I ++ AI R+ SR Sbjct: 300 RMEKNLFSTSARGADPLFLTKYNNKLEAKWIVEKIIELSQQ-TKYSQIAIFTRTAKYSRD 358 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEE L Q S+PY IYGG RFFER+ +KD L+YLRLI N + + +F RV+NTP R IG +T Sbjct: 359 LEEELFQNSIPYVIYGGTRFFEREIVKDLLAYLRLINN-SSEVSFIRVINTPRRSIGPKT 417 Query: 423 LDVVRQTSRDRQLT-LWQACRELLQEKALAG-RAASALQRFMELIDALAQETA-DMPLHV 479 L+ + + ++ ++ L K L + L++F++ I + D + Sbjct: 418 LEKIITLASEKGYEKSFEFLENLYINKNLQSFFSLKDLEKFIQAILEARESLKNDQKIAY 477 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 +++++ ++ ++ ++ ++++L + ++ EE+ + L +L+ + Sbjct: 478 VLEKLVEKIDYKSFCIFDRNKRKDQVDFDIDQLYESI---AFWEEENPELLLDDYLNEIS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE---GGRLEEER 596 L Q + D V +MT HSAKGLEF VFI G+ E FP +SL +EEER Sbjct: 535 LLTSGDQ-NENSDQVSIMTAHSAKGLEFDYVFITGLAEKHFPHFLSLKSNDYDDEIEEER 593 Query: 597 RLAYVGVTRAMQKLTLTYAETRRL--YGKEVYHRPSRFIGELPEECVEEVRLRATVSR-- 652 RL YV VTRA ++L LT T ++ SRFI E+ + R + Sbjct: 594 RLCYVAVTRAKKQLFLTAPLTLYWARDREKEELEISRFIEEMGLASSQNYEKRFSHKSLN 653 Query: 653 --------------PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRL 698 + + +++ K+G ++H FG G +V E H ++ Sbjct: 654 DTDSYYQNSDYVSFDWKEKFVEQNYAKDNQEIKVGDLIKHDHFGVGKVVKEEDEIIHVKM 713 Query: 699 QVAFQGQGIKWLVAAYARLESV 720 +GIK + + + + Sbjct: 714 N---DHKGIKTFIKNHKSISKL 732 >UniRef50_C7MP63 DNA/RNA helicase, superfamily I n=6 Tax=Coriobacteriaceae RepID=C7MP63_CRYCD Length = 841 Score = 719 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 208/528 (39%), Positives = 319/528 (60%), Gaps = 5/528 (0%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L++LN +Q EAV LLVLAGAGSGKTRVL +RIA ++ +P+ I+A+ Sbjct: 1 MALD--LETLNPEQHEAVMTTEGPLLVLAGAGSGKTRVLTYRIAHMIEDLGVAPWEILAI 58 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAAAEMR R+G L+G + GMWV TFH + R+LRA+ ++F I +D Sbjct: 59 TFTNKAAAEMRERLGALVGPAARGMWVSTFHSMCVRILRANAEVIGFTKNFTIYADDDSK 118 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHI-QSYGNPVEQTWQKVYQAYQE 179 RL+K ++ +++D K++P I+S K+E + P Q +P+ +VY Q+ Sbjct: 119 RLIKDIMAQLDIDPKRFPVNALRNRISSAKNELILPDAFDQRASDPIALVAARVYHELQK 178 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +A DF +LL+ L+ + P++L+ Y+ERF +LVDE+QDTN+ QYA LLA Sbjct: 179 RLHQANAFDFDDLLMYTWLLFKHHPNVLEAYQERFRYLLVDEYQDTNHAQYAITTLLAAR 238 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +M+VGDDDQSIY WRGA + NI F D+P T++LE+NYRST+ IL AANA+I + Sbjct: 239 HKNIMVVGDDDQSIYSWRGADIRNILEFEQDYPQTRTVKLEKNYRSTATILDAANAVIAH 298 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQ 359 N R K+L G G+ I +Y A +E DE R++ I+ G + + A+ YR+NAQ Sbjct: 299 NVNRKSKRLVPTGDTGDKIHVYMASDERDEGRWIAGEIERRHTQGTSYNQIALFYRTNAQ 358 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 SR+LE+ LL+A +PYRI GG RFF+R EI+D ++YL L+ N DD A +RV+N P RGIG Sbjct: 359 SRMLEDMLLRAGVPYRIVGGTRFFDRAEIRDVMAYLTLVVNPADDMAAKRVINVPRRGIG 418 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 T++++ + T +A + + ++++ +AL +F L+ A T + L Sbjct: 419 KTTIELIDACAARNNCTFLEAAQLTIADESVRLSTRTALGQFTSLLSEAATWTGE--LRR 476 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 + +++ SG+ E ++ R+EN++E + +F+ + ++ Sbjct: 477 IVEMILERSGMVRALENSGTDEDLGRVENIKEFLGVVDEFTATHDADE 524 Score = 196 bits (499), Expect = 3e-48, Method: Composition-based stats. Identities = 65/243 (26%), Positives = 99/243 (40%), Gaps = 42/243 (17%) Query: 516 TRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGM 575 + L F+ AL AV LMT+H+AKGLEF VF+ GM Sbjct: 602 AADMAAPVRVLSGDSLADFIEWVALRTDLDTMSDDGTAVTLMTVHAAKGLEFDCVFVAGM 661 Query: 576 EEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 EE +FP S+++ +EEERRLAYV +TRA ++L +T A R+L+G+ + SRF+ E Sbjct: 662 EETIFPHMNSINDATGVEEERRLAYVAITRARKQLYITCASNRKLFGQTQANPTSRFLAE 721 Query: 636 LPEECVEEVRLRATVSRPVSHQRMGT---------------------------------- 661 +P E L + ++ G+ Sbjct: 722 IPAELRHTSGLGSAGFSGTGWEKRGSRRGISGSGAEAGHGRVFGTSSASGSSSRKRTPTA 781 Query: 662 ---PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG-IKWLVAAYARL 717 + G V H FG G ++ ++G L + F G +K L+ YA + Sbjct: 782 AAHRKEAAGMSFAKGDTVDHKVFGRGKVIKVDGD----TLSIRFAKTGSVKKLLKDYAPI 837 Query: 718 ESV 720 + Sbjct: 838 VKI 840 >UniRef50_Q6XYV7 ATP-dependent DNA helicase n=2 Tax=Spiroplasma RepID=Q6XYV7_SPIKU Length = 729 Score = 718 bits (1855), Expect = 0.0, Method: Composition-based stats. Identities = 245/740 (33%), Positives = 378/740 (51%), Gaps = 36/740 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 V+ ++SLN QREAV + ++AGAGSGKTRV+ ++IA+L+ N P+ I AVTF Sbjct: 2 VNEFIESLNPNQREAVLRITGPVRIIAGAGSGKTRVITNKIAYLIKYANLQPWRICAVTF 61 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKA EMR RI +++G S + T+H L R+LR + N + F I+D DQ + Sbjct: 62 TNKATNEMRTRIVEMIGNSGQRCMIATYHALCVRILREDIIHLNYDRYFNIIDMADQDSI 121 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 ++ + K + + + +I+ K++ + P+ ++ N E W +VY Y++ Sbjct: 122 IRNIYKRLPMKYDAQEAKMVKNFISKLKNDFISPNSAKTSVNGDEMRWAEVYDTYEKRLR 181 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 VDF +L+L ++L+ N +L+ ++ RF LVDEFQDTN +Q+ I+ L GD Sbjct: 182 EINSVDFNDLILLTYKLFKNNGEVLKKWQNRFDYFLVDEFQDTNELQFDIIKWLVGDNSN 241 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + IVGD DQ+IY WRGA++ I F FP +TI L +NYRST +ILS AN LI +N Sbjct: 242 ITIVGDPDQTIYSWRGAKINLILNFDKYFPHTQTIVLNENYRSTQSILSLANNLIIHNKN 301 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 R+ K L+T A G+ LY N DE+ FV +IKT + + ILYR+N SR Sbjct: 302 RIEKNLFTIKASGQLPILYHGANSSDESDFVARKIKTLIKEENYDYNDILILYRANYLSR 361 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 LE AL + YRI+G +F+ER+EIKDAL++L++I N ND A ER++ + IG + Sbjct: 362 DLETALADYGISYRIFGAFKFYERKEIKDALAFLKIIMN-NDFLAIERILLLIPK-IGPK 419 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALA-GRAASALQRFMELIDALAQETADMPLHVQ 480 T + + Q +D+Q+ + L + + ++ + L ALAQ + Sbjct: 420 TFEQIMQILKDQQIMFTTLLEQHFDLLPLNLQHSLNKVREAIVL--ALAQLPTVKSIESL 477 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE-EDEDLMPLQAFLSHAA 539 ++ +G E+ + N+ EL+ + +F E L +L + Sbjct: 478 LVLLLDKTGYLQRLRDNYEEEREE---NILELIASIGKFDQQNKELAGTELLSEYLQLIS 534 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG-GRLEEERRL 598 L+ + + LMT+H+AKGLE VFIVG+ EG+FP+ ++ G +LEEERR Sbjct: 535 LQTDSDNL--TDNTISLMTIHNAKGLEKKVVFIVGLNEGIFPTTQAIKMGTEQLEEERRA 592 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 YV +TR+ + L ++YA+ Y SRFI EL + E+V S+P S Sbjct: 593 LYVAITRSEELLFISYADGYS-YITGNERFESRFIKELDNDFYEKVNSERLFSKPKSITI 651 Query: 659 MGTPMVENDSG-----------------YKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 E S +K+ V H FG G +V + +Q+ Sbjct: 652 SYNNKSEKQSRTVFNLNKNIESTFKTNLWKVNDTVSHELFGIGVVVKIIAQN----VQIV 707 Query: 702 FQG-QGIKWLVAAYARLESV 720 F +K + ++ V Sbjct: 708 FPHPYNVKIISVDSQAIKKV 727 >UniRef50_B9KCT9 ATP-dependent DNA helicase n=1 Tax=Campylobacter lari RM2100 RepID=B9KCT9_CAMLR Length = 687 Score = 718 bits (1853), Expect = 0.0, Method: Composition-based stats. Identities = 225/727 (30%), Positives = 375/727 (51%), Gaps = 53/727 (7%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 + LND Q+EA+ +L+LAGAGSGKT+ + R+A+L+ + + +TFTN Sbjct: 2 SFFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLTLTFTN 61 Query: 65 KAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA M+ R L+ + + TFH LR + N +F I+D++D+ ++L Sbjct: 62 KAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKIL 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-------GNPVEQTWQKVYQA 176 K L Q YI++ K++ I+ N + +Y+ Sbjct: 122 KDLASE----NLQSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQ 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y+ + +DF +LL+ +++ + +++T I VDE+QDTN +QY ++ L Sbjct: 178 YEHFLIQNNFMDFDDLLMLTNKIL-EDEAFAKEQSQKYTYITVDEYQDTNALQYQILKKL 236 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 + +VGDDDQSIYGWRGA++ENI F F + ++LEQNYRSTS IL AAN L Sbjct: 237 CASHENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANEL 296 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 IE+N RLGK L +GE I++ +E E+ V + ++G +E AILYR Sbjct: 297 IEHNRKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRV 356 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 NA SR LEEA + +P+++ G+RF+ER EIKD +SYLRL++N NDD +F+R++N P R Sbjct: 357 NALSRALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKR 416 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 G+ +L+ + +++ L+L+++ L + + L++F+ + + ++ Sbjct: 417 NFGNASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDD--- 473 Query: 477 LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 L + ++ ++ Y+ +G+ ++ N++EL + + L L+ Sbjct: 474 LLAMILALEEEFKIKEFYK--DNPEGEDKLLNIDELYANLKD---KISHGNYNGLDDILN 528 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEER 596 +L + D ++++ +M++H++KGLEF VFI+G+EEG FP E +EEER Sbjct: 529 EISLLNEQDGLD--KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTS---ESSNIEEER 583 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE---LPEECVEEVRLRATVSRP 653 RLAYV +TRA +KL L+YA +R G SRF GE + +E Sbjct: 584 RLAYVAITRAKKKLYLSYANSRFYKGSRTRLEKSRFFGESNVIKKEL------------- 630 Query: 654 VSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + + YK G ++H FG G + + G +L + F G + ++++ Sbjct: 631 --------TLDHQKNCYKKGDLIKHKIFGIGRVTGVSKIGAEEKLTINFGGI-ERMIMSS 681 Query: 714 YARLESV 720 + +E V Sbjct: 682 F--VEKV 686 >UniRef50_Q4A5L9 Atp-dependent helicase n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L9_MYCS5 Length = 734 Score = 715 bits (1847), Expect = 0.0, Method: Composition-based stats. Identities = 232/740 (31%), Positives = 374/740 (50%), Gaps = 37/740 (5%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 LLD LN+KQREAV S+L ++AGAG+GKT+VL +I +L+ + P I+AVTFT Sbjct: 7 KDLLDDLNEKQREAVEYFDSHLRIIAGAGTGKTKVLTRKILYLILEKKVDPSKILAVTFT 66 Query: 64 NKAAAEMRHRIGQLMGTSQGGMW--VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 NKAA EM+ RI Q ++ V T H ++LR + ++F ILD D+ + Sbjct: 67 NKAAKEMKDRINSKYYDKQKVLFENVFTLHSFCAQVLRKYINLIGFSRNFPILDELDKKQ 126 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY------GNPVEQTWQKVYQ 175 +L+ L + + YI+ K+ L + + G+ V +T VYQ Sbjct: 127 VLQDLYVKNKITNHEVSYSNMAKYISWAKNNLLDQKDLIAELEKQFSGDAVSKTIANVYQ 186 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y G +DF +L+L L P++ F ILVDEFQDT+++Q+ + Sbjct: 187 DYLNYMAEKGALDFDDLILHCKTLLEMHPNVAAKIARYFNYILVDEFQDTSDLQFDILEK 246 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + + ++ IVGD DQ+IY WRGA V+ I F N F ++TI L+ NYRST IL++AN Sbjct: 247 IIDKSSQLTIVGDPDQTIYNWRGASVDLILNFENIFENSKTIVLDTNYRSTKKILASANK 306 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI+NN R K L T+ +G I Y AFN EA++V+++IK + + ILYR Sbjct: 307 LIKNNKNRFSKDLITNNDEGNDIEFYHAFNTEAEAQWVISKIKLLKKQKHQIKNIVILYR 366 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 SN SR E+ALL + Y+I+ G +F++R EIKD L++L+ I N D A +R++N P Sbjct: 367 SNYYSRAFEDALLGEGINYKIFNGYKFYQRTEIKDVLAFLKTILN-KDSIALKRIINVPV 425 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAA-SALQRFMELIDALAQETAD 474 RGIG +T++ + + +++L+ A +E L + F++++ + Sbjct: 426 RGIGPKTVEKIEAFAEKNKISLYDALFTHFKELPLGKEIILKKIYPFIKILRKYQLISEK 485 Query: 475 MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTA-TRQFSYNEEDEDLMPLQA 533 PL V T +++++ + + Q IEN++EL++ + + ++ Sbjct: 486 YPLPVITQKLLEELNYLEQI-KGNQNENQNAIENVKELISVSMKNYFETNKEATA---ID 541 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-- 591 +L+ +L + G+ D V LMT+H++KGLEF VFIVG+ EG+FP+ L++ Sbjct: 542 YLNQVSLLSTTGEDVEGDDFVSLMTIHASKGLEFDNVFIVGLTEGVFPNYKHLEDAKENK 601 Query: 592 ----------LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 +EEERRLAYV +TRA + L ++ + + SRFI E+ + Sbjct: 602 HKTKTELNKGIEEERRLAYVAITRARKNLFVSDSRGSVYAPIIHEKQTSRFIREMGIDF- 660 Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 V + R + + +G V H +FGEG + + + V Sbjct: 661 ----ESFLVDKTSKFSRYLSEEENKNIKIIVGDAVSHTRFGEGIVQEV----NDYDIVVK 712 Query: 702 FQGQGIK-WLVAAYARLESV 720 F + + + ++ + Sbjct: 713 FVHESAPLTIKKNHPSIKVL 732 >UniRef50_D1J8P0 ATP-dependent helicase n=1 Tax=Mycoplasma hominis ATCC 23114 RepID=D1J8P0_MYCHP Length = 745 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 221/755 (29%), Positives = 387/755 (51%), Gaps = 64/755 (8%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN++Q+ AV L ++AGAGSGKTRVL ++IA+L+ P I+A+TF+NKA Sbjct: 4 LKDLNEQQKSAVIYNEGPLRIIAGAGSGKTRVLTYKIAYLIQKLGVLPNRILALTFSNKA 63 Query: 67 AAEMRHRIGQLMGTSQGG---MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 A EM+ R+ L+ ++ TFH + ++LR + DFQILD DQ +L Sbjct: 64 ANEMKQRVFNLLAEDNPSNLSPYISTFHAMCAKILRKEIYNFGYENDFQILDELDQKEIL 123 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDE---------------GLRPHHIQSYGNPVEQ 168 K + +++ ++ + +I ++K+ ++ ++ Sbjct: 124 KIVYSELDISPTEFTFSSIISFIQNKKNSIEYLNNSINDNNEHFNEDSDSQETQDEKIKA 183 Query: 169 TWQKVYQAYQEACDRAGLVDFAELLLRAHELWLN--KPHILQHYRERFTNILVDEFQDTN 226 +K+Y+ YQ +R+ +DF +LL+ ++L+ + + +++RF IL+DEFQDT+ Sbjct: 184 IKEKIYERYQLHLERSHSLDFDDLLVFVYKLFYEPKFSFVAERWKKRFDYILIDEFQDTS 243 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRST 286 +QY ++ LA + + IVGD DQ+IY WR A + I F D+P + T++LE+NYRST Sbjct: 244 ILQYRIMQKLANEH--LTIVGDPDQTIYSWRNADINIIMNFDKDYPNSVTVKLEENYRST 301 Query: 287 SNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA 346 IL AAN LI +N RL KKL+T+ +GE I YC FN+ EAR++ +I + N Sbjct: 302 KTILRAANNLISHNKLRLEKKLFTENEEGENIEFYCGFNDEAEARWIATKISELKRNRVQ 361 Query: 347 LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAA 406 L AILYR+N+ SR +EEAL++ + Y+++G ++F++R+E+KDAL+YLR+I + + + Sbjct: 362 LKNIAILYRTNSCSRAIEEALIKENTIYKLFGSIKFYQREEVKDALAYLRVIHD-GSEIS 420 Query: 407 FERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACR----ELLQEKALAGRAASALQRFM 462 R++N P+R IG+ T++ + S+ L L++ ++ +E ++G L F+ Sbjct: 421 LLRIINKPSRKIGNVTIEKLLSASKKYNLGLFEYLETHFNQIQKELHISGDTLKNLANFI 480 Query: 463 ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN 522 I + +H+ +I + + E+ + +I+N L+ A ++ Sbjct: 481 NEIRWARRAIQTNAIHLTIKELIVNKIKYFDEIKNSEEEYENKIDNFNSLIEAIAEWEKK 540 Query: 523 EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS 582 + +L L D V LMT+H++KGLEF VF+ + E +FP Sbjct: 541 NPQG---SIDEYLQEITLITDRDVEDDAASFVSLMTVHNSKGLEFDYVFVACLAENIFPL 597 Query: 583 QMSL-----------------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 + ++ + LEEERRLAYV +TRA ++L L+++ R ++ Sbjct: 598 KRAISISPQDDFTFLNSKNFKENIEGLEEERRLAYVAMTRAKKRLMLSFSVGRNGINRK- 656 Query: 626 YHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 SRF+ E + +++ S + +G + H +G+G Sbjct: 657 ----SRFLSEAGINEIRTIKIANNFSIAAEQETRNN-------DLIVGDYIIHNTYGKGL 705 Query: 686 IVNMEGSGEHSRLQVAFQ-GQGIKWLVAAYARLES 719 I++M + ++V F+ + I+ L + ++ Sbjct: 706 IIDM----VDNVIEVKFENDKKIRKLSKTHHSIKK 736 >UniRef50_B2S4R5 DNA helicase II n=3 Tax=Treponema RepID=B2S4R5_TREPS Length = 670 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 230/682 (33%), Positives = 342/682 (50%), Gaps = 52/682 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + L +LN+ QR+AV S LL+LAGAGSGKTRV+ +IA L+ P I+AVTF Sbjct: 1 MESYLSALNEAQRQAVCHYGSPLLILAGAGSGKTRVITTKIAHLIRSRQVRPEQILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMR R L ++ G + TFH L +LR + + L F I D D L Sbjct: 61 TNKAAREMRTRACAL-ESAAQGATICTFHALGVWILRRYAVRLGLNPHFSIYDDHDVRAL 119 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ------------SYGNPVEQTW 170 L +++ + I+ KD GL + + ++ + Sbjct: 120 LPKILPHCDHSR----AGMLARGISQAKDYGLDCASFESVHARVSAPACAARAVLGDRQF 175 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 Y Y G VDF +L++ +L + + R+ ++VDE+QD+N Q+ Sbjct: 176 AHAYACYHRRMREMGTVDFGDLIMLPVQLLREHQDVAEQLHARWQVVMVDEYQDSNVAQF 235 Query: 231 AWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNIL 290 ++++L G + +VGDDDQSIY +RGA+V+NI F F + IRLE NYRST IL Sbjct: 236 HFLQVLTGAHTYLCVVGDDDQSIYRFRGAEVKNILTFPEFFQNTQIIRLEYNYRSTDAIL 295 Query: 291 SAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAEC 350 A+++++ N RLGK L G L+ N+ +EA V+ I+ + G A+ Sbjct: 296 RVADSVVKKNQDRLGKALIAQRTGGTKPRLFLLNNQDEEAALCVHLIQEARARGIPYADW 355 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AILYR NAQS E+ L+ +PYRI G ++F+ R E+KD L++L+LI N +D+ A RV Sbjct: 356 AILYRVNAQSLSFEQCFLRNRIPYRIVGTLKFYSRAEVKDVLAFLQLIVNGSDELALRRV 415 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQ 470 +N P RGIG++T D + ++ +T + + AL RA + F+ L+ AL Sbjct: 416 LNKPPRGIGEKTQDALFVCAQQAAITDFTTLQS-THLTALGTRARQKVSSFLSLLRALRA 474 Query: 471 ETADMP-------------------------LHVQTDRVIKDSGLRTMYEQEKGEKGQTR 505 P L V++ +GL Y Q+ E+G Sbjct: 475 RMPQAPAAGEEARTSAPPEEPVEERTHDAEGLARFVSVVMEHTGLEEWYRQKDEEEGTQC 534 Query: 506 IENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGL 565 N++EL+ A ++ + E L +FL H L+ DAV L+T+H+ KGL Sbjct: 535 AVNVQELMNAASLYACSHEG-----LVSFLEHIQLDQNMADEGGAADAVHLITIHNTKGL 589 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 EF +V + G+E G+FP D+ ++EERRL YV TRAM L LT RR++G+ Sbjct: 590 EFRRVILTGLENGVFP----RDDEADIQEERRLMYVACTRAMDSLYLTACAYRRMWGRHT 645 Query: 626 YHRPSRFIGELPEECVEEVRLR 647 +PSRF+ EL +E R Sbjct: 646 AMKPSRFLTELDSALLEITDPR 667 >UniRef50_B0SSS8 ATP-dependent DNA helicase PcrA n=6 Tax=Leptospira RepID=B0SSS8_LEPBP Length = 678 Score = 712 bits (1839), Expect = 0.0, Method: Composition-based stats. Identities = 236/652 (36%), Positives = 364/652 (55%), Gaps = 12/652 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++ L LN Q EAV+ + LLV AGAGSGKTRV+ +RIA ++ I+A+ Sbjct: 1 MSLTGPLMKLNAAQMEAVSTIQGPLLVFAGAGSGKTRVITNRIAHMVEGVKIPASKIVAL 60 Query: 61 TFTNKAAAEMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +FTNK+A EM R+ +++ G+ + TFH L ++L+ H + F + + DQ Sbjct: 61 SFTNKSAKEMAERLRKMVPREKLKGITLSTFHSLGLKILKEHIGKLGYNETFLLFNGTDQ 120 Query: 120 LRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 + L+K+ LD K+ PPR+ + I+ K+ + P + +++ Y++ Sbjct: 121 EAFVSDLLKSKRLDPKKVPPREILRRISYAKNTQVHPKD-NGLTGEFDLVAAEIFPLYED 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +DF +L+L L P I +Y+ + LVDEFQDTN +QY ++ L G+ Sbjct: 180 GLKEKNAIDFDDLILLPKRLLAEFPEIAAYYQRKHEYFLVDEFQDTNQLQYEFLSLFRGN 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + + +VGDDDQSIY +RG+ V+ I F +FP A+ +RL +NYRSTS I+ AAN+LI+N Sbjct: 240 SDNLCVVGDDDQSIYAFRGSNVQLILNFEREFPHAKVVRLLENYRSTSLIIQAANSLIQN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAECAILYRSNA 358 N GR K L++ E + Y +E +EA FV RI+T N E AIL+R+N Sbjct: 300 NIGRKEKTLYSRIPSAERVEYYETADEREEAIFVAGRIQTLLIKNEFKGKEIAILFRTNF 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR EE L S+PY++ GG FF+R+EI+D +SYLR +AN DD + R++N P RGI Sbjct: 360 QSRPFEEELRNRSIPYKVVGGYNFFDRKEIRDCISYLRYVANPKDDYSLLRIINYPKRGI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKAL----AGRAASALQRFMELIDALAQETA- 473 G T+ +++ + +L+L++ ++++ + + +F+E++DA ++ A Sbjct: 420 GPGTMQKLQEEAFTHKLSLYEIFHKMIESPDYLPEVKAKVRQEIYQFVEMVDAFKKKFAM 479 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKG--QTRIENLEELVTATRQFSYNEEDEDLMPL 531 L +I G E+ E+ + RI NL ELV F E E + Sbjct: 480 SQKLAPVLREMITQIGFEREISMEETEEKVVKARIYNLSELVNMLSFFEEEEGREGKATI 539 Query: 532 QAFLSHAA-LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM-SLDEG 589 FL L E + D VQL+T+H +KGLE+ VF+VG+EEG+ P+ +EG Sbjct: 540 FDFLQRLVLLMEDEPKEDEEDRRVQLLTMHQSKGLEYDLVFLVGLEEGILPNSRVIEEEG 599 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 ++EERRL YVG+TR +KL LT A TRR +G+++ PSRF+ EL ++ V Sbjct: 600 EVVDEERRLLYVGMTRPRRKLYLTSARTRRKFGEQIESAPSRFLNELSQDAV 651 >UniRef50_D0L0Z4 UvrD/REP helicase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0Z4_HALNC Length = 688 Score = 711 bits (1835), Expect = 0.0, Method: Composition-based stats. Identities = 235/673 (34%), Positives = 346/673 (51%), Gaps = 21/673 (3%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q AV S LLVLAGAGSGKTRV+ +I +L+ + + AVTFTNKAA Sbjct: 8 GLNAQQSAAVRHLESPLLVLAGAGSGKTRVITEKIVYLIEKQGIPARQVFAVTFTNKAAK 67 Query: 69 EMRHR-IGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM R +L + G+ + TFH L +R + L F + DS+D L L K LI Sbjct: 68 EMVARTAERLPPERRRGLNISTFHTLGLNFIRREYAALGLRAGFTVFDSDDSLALFKSLI 127 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-----NPVEQTWQKVYQAYQEACD 182 + P+ A W I+ K++ P + + ++ YQ Sbjct: 128 GHSEYKDV-IEPKAAQWQISQWKNDLRTPQSCYEQAKNEGWDEETRALAGLFDQYQRQLT 186 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +L+ R EL + + + ++ R +LVDE+QDTN QY +RLL G G Sbjct: 187 ACNALDFDDLIGRPVELLQSDAAVRERWQARVRYLLVDEYQDTNTTQYELVRLLVGKIGA 246 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + VGDD QSIY WRGA+ EN+ R +DFP I+LEQNYRS +++L AAN LI + Sbjct: 247 LTAVGDDHQSIYAWRGAKPENLNRLADDFPNLHRIKLEQNYRSVNSVLKAANHLIALDTT 306 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSR 361 K+LW+D GEP + A DEA + I + A+L+R N Q+R Sbjct: 307 TASKQLWSDIGMGEPHRVIVAATAEDEAERIATEILHRHFRAQTEYRDFAVLFRGNHQAR 366 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 ++E+AL + ++PY + GG FFER EIKDA+SYL+L+ N +DDAAF RVVNTP R IG Sbjct: 367 LIEQALRKLNIPYSLTGGQSFFERAEIKDAMSYLKLLVNPDDDAAFLRVVNTPRREIGPT 426 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + +R+R+ +L+ A R + + RAA L RF + +D + + + Sbjct: 427 TIEKLGGFARERRSSLFAAARSIGIQSVFDNRAADRLNRFCDWLDGIRAQPDRDAI-DVI 485 Query: 482 DRVIKDSGLRTMYEQEKG--EKGQTRIENLEELVTATRQFSYNE--------EDEDLMPL 531 +V +++ + R +N+EE + + S + E M L Sbjct: 486 QQVFDAIDYPAYLREQESTPKAADRRWQNVEEWLDWLAKISDTQVEAESEGGESATKMDL 545 Query: 532 QAFLSHAALEA--GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 A L + + +AV L+TLH+AKGLEF VF+ GMEE + P + +++ Sbjct: 546 PALAQRMTLLGILDQQTREKDSNAVALLTLHAAKGLEFGHVFMAGMEEDILPHRDCIEDE 605 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRAT 649 RL EERRL +VG+TRA LT T + RR YG+ PSRF+ ++P + ++ Sbjct: 606 ARLAEERRLCFVGITRARLSLTFTLTKRRRRYGEWKDTEPSRFLDDIPADLLQWQGEGIE 665 Query: 650 VSRPVSHQRMGTP 662 + VS + Sbjct: 666 QPKEVSQAQGREH 678 >UniRef50_C0R2D4 ATP-dependent DNA helicase n=4 Tax=Brachyspira RepID=C0R2D4_BRAHW Length = 659 Score = 709 bits (1832), Expect = 0.0, Method: Composition-based stats. Identities = 229/646 (35%), Positives = 370/646 (57%), Gaps = 20/646 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +L+++++ QRE + S LL+LAGAGSGKT V+ +IA+L++ +P +IMAVTFTN Sbjct: 2 DILENVSEVQREGILHTGSPLLLLAGAGSGKTLVITRKIAYLINELEVAPENIMAVTFTN 61 Query: 65 KAAAEMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ R+ L+ +++ TFH R+L+ + +F ILD D+ ++ Sbjct: 62 KAAHEMKERVCSLLPDIKPSRLFIRTFHSACLRILKENAHFLGYKSNFLILDEGDKASVI 121 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 KR++K + K + +I++ K+ ++ VY+ Y E Sbjct: 122 KRIMKEEEV-PKSIGQKIITRFISNVKNGM------DDGIVFDRDIFENVYKKYTEYEFN 174 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK- 242 ++DF +L+L +L+ + +L +YR RF ILVDEFQDTN QY I+LL D Sbjct: 175 ENVMDFDDLILNTIKLFEQENKVLNYYRNRFKYILVDEFQDTNPQQYKLIKLLTQDAEND 234 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQSIY +RGA V NI F D+P + +RLE+NYR +I+ AA ++I+NN+ Sbjct: 235 LTVVGDDDQSIYAFRGADVLNILDFEKDYPNTKIVRLEENYRCPKDIVEAALSVIKNNSN 294 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 R K ++++ + I + +++L+EAR VVN I++ DNG + +L+R+N+QSR Sbjct: 295 RHEKNVFSNKPNEFKIENWICYSDLEEARSVVNEIESLFDNGFEARDIVVLFRTNSQSRA 354 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 E+ L S+ Y+I GG+ FFER EIKD++S+LRL+ D+ + R +N P RGIG+++ Sbjct: 355 YEKELRLHSINYKIVGGVGFFERIEIKDSISFLRLMTGFGDNFSVRRTINVPPRGIGEKS 414 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV--- 479 + + R+LTL+ A + + E L+ +A ++ + +I+ A + + ++ Sbjct: 415 FNNFETFANSRKLTLYNAI-DYIDESGLSKKAILNIKAYKNIIEEYAVKIKEDIINEDGI 473 Query: 480 ----QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 +KD ++++ + E+ T EN++EL + E + L FL Sbjct: 474 HIELLFFEFLKDIDYFSIFKGDGNERVITAEENIKELFRGFYDYKSMEAN---ATLITFL 530 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 L D +D V LMT+H+AKGLEF VF+ GME+G+FP SL+E ++EE Sbjct: 531 EENTLYRDLNTNDEKEDYVTLMTIHNAKGLEFDVVFMTGMEQGVFPHYFSLEEEKGIDEE 590 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 RRL YVG+TRA +KL LTY++ RR+ + PS F+ E+P++ + Sbjct: 591 RRLCYVGITRARRKLYLTYSKKRRVSTGIMEQIPSSFLLEIPKKLM 636 >UniRef50_A5UVF1 ATP-dependent DNA helicase, Rep family n=6 Tax=Chloroflexi (class) RepID=A5UVF1_ROSS1 Length = 659 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 227/661 (34%), Positives = 328/661 (49%), Gaps = 31/661 (4%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L SLN +QR AVAAP +LV AGAGSGKTRVL RIA+L+ SP +I+A+TFTNK Sbjct: 8 LFASLNPEQRTAVAAPPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNK 67 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAH-HMDAN-LPQDFQILDSEDQLRLL 123 AA EMR R+ + G S G+ GTFH + +LR H DF I ++Q+ L Sbjct: 68 AAREMRQRLRDMPGVSIRGLTAGTFHSVCASVLREHIAGRIGSYTADFTIYAEDEQVHLA 127 Query: 124 KRLI-KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEAC 181 + A P + + +I+ K L P + + + + YQ YQ + Sbjct: 128 SAALDAARERPPALLEPEELLRHISRAKSRLLTPRLAARFARDDLARFVAGCYQRYQRSL 187 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT- 240 +RA +DF +L+L H L+ P +L + R+ ++L+DE+QDT+ Q+A + LL + Sbjct: 188 ERANALDFDDLILLTHRLFSEHPDVLDACQSRWRHVLIDEYQDTDPAQHALVELLTRPSP 247 Query: 241 -----GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 + VGD Q+IYG+R A I RF DFP A I L NYRS IL AA A Sbjct: 248 ANGGVRSLFAVGDGMQAIYGFRNADHTIISRFERDFPDARVIELATNYRSRQPILDAAYA 307 Query: 296 LIENNNGRLGKKLWTDGADGE-------PISLYCAFNELDEARFVVNRIKTWQDNGGALA 348 +I ++ L + P+ + A + DEA V I G Sbjct: 308 VIRHSRTVQPMALRATKPETPRGVGYTSPLQIVDAKDARDEAERVARSIADLLRQGRRPQ 367 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 E A+LYRS SR E AL A +PY + G FF+R ++DAL+YLR+I N D + Sbjct: 368 EIAVLYRSRHMSRAFESALRHARIPYALRGATGFFDRAVVRDALAYLRVINNPADTLSLN 427 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL 468 R+ N P RG+G +L + + R LTL A L +AA ++ L+ Sbjct: 428 RIANVPPRGLGANSLVTLSAFAGQRGLTLADALIHPEALALLPSKAAEGARQLAALLTRW 487 Query: 469 AQETAD-MPLHVQTDRVIKDSGLRTMYEQE-KGEKGQTRIENLEELVTATRQFSYNEEDE 526 + + V++ +G + EQ + E +L+EL A Sbjct: 488 RRLAESALSPDHLLADVLERTGYQAWLEQRLEPENVPDARAHLQELANAAAD-------- 539 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 L AFL AL D +D VQL T+H+AKGLE+P VF+VG+EEG+ P + SL Sbjct: 540 -HTALNAFLQEVALLTSADDNDEERDRVQLSTIHAAKGLEWPIVFVVGLEEGVLPHEHSL 598 Query: 587 DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 ++EERRL YV +TRA ++L L++A +R + +PSRF+ ++ E R+ Sbjct: 599 VTPEGVDEERRLCYVALTRAGEQLYLSWAASRV---RGKLAKPSRFLNDIEAYGRERARV 655 Query: 647 R 647 + Sbjct: 656 K 656 >UniRef50_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GG96_9DELT Length = 693 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 230/655 (35%), Positives = 357/655 (54%), Gaps = 23/655 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD L SLN QREAV LLVLAGAGSGKTRV+ HRIA LM P I+A+ Sbjct: 1 MD----LSSLNPAQREAVLHTEGPLLVLAGAGSGKTRVITHRIARLM-ELGTQPEEIVAL 55 Query: 61 TFTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 +FTNKAA EMR R+ +++G + + +GTFH L R++R +P FQILD D Sbjct: 56 SFTNKAAEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQGDV 115 Query: 120 LRLLKRLIKAMNLD----EKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKV 173 +++ L++ +K+W + I+ K++ L ++ N ++ ++ Sbjct: 116 NGIVRALLREYGFHGGSAKKRWDINAIVQRISLWKNDFLSAAEVKRKVSSNDYDEIAAEL 175 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+AY + VDF +L+ R + + P + +R RF +LVDE+QDTN Q+ + Sbjct: 176 YEAYDDRLRALAAVDFDDLVCRIALMLQDNPLTKKRWRRRFRYLLVDEYQDTNTAQFQML 235 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 L G+ + +VGDDDQ+IYGWRGA+V NI F F A+ I+LE NYRS I + A Sbjct: 236 LELLGEDQNLCVVGDDDQAIYGWRGAKVANILGFDLYFRNAKVIKLEANYRSRPPITTCA 295 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTW-QDNGGALAECAI 352 NA+I +N R K+L GE + L + EA++V ++I + G CA+ Sbjct: 296 NAVIAHNTSRHDKELVPQRTGGEKVQLVVTRDGPSEAKWVADKIYQLIHERGARPKHCAV 355 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYRS+ Q+R +E+ L + +P+R+ GG F++++ +KDA +YL+L+ +DD A R ++ Sbjct: 356 LYRSSRQARAVEQNLQEHGLPFRMLGGQPFYDKKTVKDATAYLKLLVMPSDDIAVRRALD 415 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP +GIG +T++ + + Q L A + + + GR +L+RF + Sbjct: 416 TPAKGIGRKTVERMSHWAEVHQKRLVDAIYHAKEIEGITGRPLESLERFHNQLRHAQIAA 475 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQE--KGEKGQTRIENLEELVTATRQFSYNEED-EDLM 529 + + + + LR +E GE + R ++++ L+ + +F + + Sbjct: 476 SRGSVKDALRGFLDNVRLRDSVLKETGSGEATKVRWDSVQFLLDSVGRFEERAWNQKGKP 535 Query: 530 PLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM----- 584 +L + L+ + + + DA+ L T HS+KGLE+ QVFI+G+EEG P + Sbjct: 536 RWSDYLGNLDLKK-KDEDEAVPDAITLSTFHSSKGLEWSQVFIIGVEEGTLPHKRTDAPR 594 Query: 585 -SLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 S G LEEERRL YVG+TRA +L +T A TR G+E+ +PSRF+ ELPE Sbjct: 595 LSDAIAGDLEEERRLFYVGITRARDRLWMTRAATRVDRGRELEIKPSRFLDELPE 649 >UniRef50_D1B9M8 UvrD/REP helicase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9M8_THEAS Length = 653 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 242/646 (37%), Positives = 356/646 (55%), Gaps = 25/646 (3%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LD LN KQ EAV N L+LAGAGSGKTRVL +IA+L+S + SP I+AVTFTN Sbjct: 8 NVLDGLNPKQVEAVTYCDGNQLILAGAGSGKTRVLTRKIAYLISHKGVSPSKILAVTFTN 67 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHM---DANLPQDFQILDSEDQLR 121 KAA EMR R+ +L+G S G+ + TFH LR + ++D DQ R Sbjct: 68 KAAGEMRQRVERLLGGSLHGIRICTFHSYGLNFLRRNEEIMRRMGYATPLVVIDRSDQKR 127 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEAC 181 LLK L+K N+DE++ P M ++ K EG + Q++++AY+ Sbjct: 128 LLKLLLKENNVDERRVDPSWLMEAFSAAKGEG-------NGSAYFRGEAQRLFEAYEAKM 180 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 G +DF +L+ ++ L+ + +LVDE+QD N QY ++ L+ Sbjct: 181 RSQGALDFDDLIHLPLKILSTHREALERELDSIEWVLVDEYQDVNRSQYMLLKRLSSRGQ 240 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 + ++VGD DQ+IYGWRGA V I F DF GA+ LEQNYRST +IL AN +I N+ Sbjct: 241 RTVVVGDPDQAIYGWRGADVSMILNFDKDFQGAKVTVLEQNYRSTGHILEGANCVIARNS 300 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 R K LWT + GE I + A N+ +++R +V+ I Q G AL + AILYR NA SR Sbjct: 301 DRPKKNLWTAASRGEKIRILKARNDEEDSRCLVDWILELQGEGYALKDMAILYRVNALSR 360 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 + E+ L++A +PYR+ G+ F++R+EIKD L+ +RL D +FER+VN P RGIG + Sbjct: 361 LYEQRLIEAGIPYRVIRGLGFYDRKEIKDVLALMRLAIQPRDLVSFERMVNVPQRGIGAK 420 Query: 422 TLDVVRQTSRD-RQLTLWQACRELLQ-EKALAGRAASALQRFMELIDALAQETADMPLHV 479 + + + + R +L+ + L GRA ++ + + ++ L Sbjct: 421 STEALWAWMGQLEAQDPGEFWRSVLEGDAPLKGRAREGIRALARGMLGILSLRGNIRLA- 479 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++++ G E+E + R++N+EEL++ + LS A Sbjct: 480 -VRYILEEYGYGEHLEREDQSTFEERLQNVEELMSVL----------PEGSIDDVLSEVA 528 Query: 540 LEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLA 599 L + A D V L+TLH+AKGLEFP VF+VG+EEG+FP+ ++ LEEERRL Sbjct: 529 LFSDADVASG-DDRVSLLTLHAAKGLEFPVVFMVGLEEGIFPNAKCREDRSLLEEERRLF 587 Query: 600 YVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 YVG+TRA ++L L+ A R L+G + + SRF+ E+P CV E Sbjct: 588 YVGMTRAQERLFLSGAARRVLFGSFMMNPFSRFLSEIPSSCVVEDD 633 >UniRef50_C9RKG0 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RKG0_FIBSS Length = 803 Score = 706 bits (1824), Expect = 0.0, Method: Composition-based stats. Identities = 235/785 (29%), Positives = 368/785 (46%), Gaps = 94/785 (11%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 L+ +Q EAV + V+AGAGSGKTR L HR +L+ SP +I+ VTFTNKAA Sbjct: 19 SRLDKEQLEAVETTEGYVRVVAGAGSGKTRTLTHRYLYLVKEMGISPANILCVTFTNKAA 78 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 AEM+ RI ++G G ++ TFHG + LR N P++F ILD +DQ LL++ Sbjct: 79 AEMKKRIRSILGGDDSG-YISTFHGFCVQFLREEIHVLNYPKEFMILDEDDQKSLLRKAY 137 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLR----------------------------PHHI 159 + K + ++ +K + H+ Sbjct: 138 ADLGFSLKDLKISSVLDFVGGRKANDIGYVSLFAEHLADEVGASAAENAPAVENEKREHL 197 Query: 160 QSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILV 219 + W VY Y + +DF +L+L + N P L +R+R ++V Sbjct: 198 VELADEAPDKWMAVYYRYLYEQKKNYALDFDDLILVTLYILENFPEKLDKWRKRMMYVMV 257 Query: 220 DEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRL 279 DE+QD + QY LL+ + +VGD DQ+IYGWRGA + I F G +TI L Sbjct: 258 DEYQDIDGQQYCLADLLSSYHKNLFVVGDPDQTIYGWRGADINRILEFDQFHKGTKTILL 317 Query: 280 EQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT 339 + NYRST +IL +A+I+NN R+ K L A G+ Y A N +EA+++V RI+ Sbjct: 318 QNNYRSTPSILKVPDAVIKNNKYRIEKVLRPVRAGGKTPVFYHAKNTREEAKWIVERIQN 377 Query: 340 WQDN-------GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL 392 N G + A+LYR ++QSR +EEAL+ S+PY++Y G+ F++R+EIKD + Sbjct: 378 AVQNSVKNGAGGVHYKDIAVLYRMHSQSRSVEEALMSESIPYKVYSGVGFYQRKEIKDII 437 Query: 393 SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAG 452 YLR++ DD +F R VNTP R G + + +++ + R++ L++A E++ E Sbjct: 438 CYLRMLV-YADDLSFIRTVNTPKRQFGPKKMAILQAFADTRKVGLYEALLEIVYEAGRLN 496 Query: 453 R-----------------------------AASALQRFMELIDALAQETADMPLHVQTDR 483 + S + +++LI+ DM + + Sbjct: 497 DVAPDVTTQAELSSVGNDHRKIDFDCKEFLSRSNVVEYVKLIEKYRSRYKDMRVSELLSK 556 Query: 484 VIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 +++++ M + E R++NL EL +F E++ L +L + L Sbjct: 557 MLRETKYEEMLRLDGDED---RLDNLAELKQGILEFENYYEED--ASLDEYLQNIVLFTN 611 Query: 544 EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGV 603 + +D VQLMT+H+AKGLEFP VF+ G+ EG FP + + +LEEERRLAYV Sbjct: 612 ADEDSQEKDRVQLMTIHNAKGLEFPYVFVCGLNEGFFPVKR-VQNKMQLEEERRLAYVAF 670 Query: 604 TRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV-------------------EEV 644 TRA L L+ A + G+ PSRF+ E+ + + E Sbjct: 671 TRAENVLCLSDA-EDGVAGESGSRYPSRFLLEMNMDELDVARGFSDDLLLAARAFIAESD 729 Query: 645 RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 R R ++ + +G + + +G RV H FG GT+ ++ + F Sbjct: 730 RNRDLMNDFDEDESLGAVKKAPTAEFAVGDRVVHKIFGIGTVSGVDKKNFCYEIT--FDK 787 Query: 705 QGIKW 709 Sbjct: 788 FATPR 792 >UniRef50_B2UPY5 UvrD/REP helicase n=2 Tax=Verrucomicrobia RepID=B2UPY5_AKKM8 Length = 669 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 226/657 (34%), Positives = 337/657 (51%), Gaps = 32/657 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LN++Q AV++ LV+AGAGSGKTR L +R+AWL+ P++I+ +TFTNKAA E Sbjct: 26 LNEEQYAAVSSEPGPALVIAGAGSGKTRTLTYRVAWLLD-HGTDPWNILLLTFTNKAARE 84 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+ L+ +W GTFH +A+R+LR H F I+DS+D+ ++K ++K+ Sbjct: 85 MTERVRSLIPLDLSRLWSGTFHSIANRILRQHAEYLGYTPAFTIMDSDDRKSMIKSVVKS 144 Query: 130 MNLDEKQW---PPRQAMWYINSQKDEGLRPHHIQSYGNP----VEQTWQKVYQAYQEACD 182 + LDEK P + +EG Q P +V+ Y Sbjct: 145 LKLDEKSTRFPKPEVLSSLFSLADNEGANIRETQENAYPYLSNHLDAILEVHDQYVARKQ 204 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LLL L+ + H+ Y RF +ILVDE+QDTN +Q I +LA + G+ Sbjct: 205 ETNSMDFDDLLLNVVRLFQEQEHLRALYGSRFQHILVDEYQDTNYLQSRLIDMLAREHGQ 264 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 +M+VGDD QSIY WRGA +ENI F +P A+T ++E NYRS IL +NA I N Sbjct: 265 LMVVGDDAQSIYSWRGADMENILSFTTRYPAAKTFKIETNYRSVPEILELSNAAIAANEV 324 Query: 303 RLGKKLWTDGADGE-PISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 ++ K+L + GE P +L ++ +A+FVV RI+ + G +E A+LYR++ S Sbjct: 325 QIEKQLRSVRPTGEMPPALVPLNDDRMQAKFVVQRIRDLIEEGTDPSEIAVLYRAHFHSM 384 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 L+ L + +P+RI G+RFFE+ IKD ++++R + N D+ +F R+V GIG Sbjct: 385 ELQMELTRGEIPFRITSGIRFFEQAHIKDVVAFMRFVVNPRDELSFRRMVMLLP-GIGPG 443 Query: 422 TLDVVR----QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 + RQ T ++ L+ + + ++ +A + +D LA Sbjct: 444 MAQKLWIRWTACPESRQETPPESFSALMLDFPVPAKSRTAWTQLCYTLDELAPAGKLAGP 503 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + + + Y Q E R ++L L + +F E FLS Sbjct: 504 ASMLLSINEA--VYDEYMQAAFENYDQRRQDLLHLAGFSERFESTE---------DFLSQ 552 Query: 538 AALEAGEGQADTWQD----AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG--R 591 +L D +V L T+H AKGLE+ VF++G+ +GMFP Q +D+G Sbjct: 553 LSLLGNTDDESAAADFSGGSVTLSTIHQAKGLEWSVVFLIGLCDGMFPHQRVIDDGDLAG 612 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETR-RLYGKEVYHRPSRFIGELPEECVEEVRLR 647 LEEERRL YVG+TRA +L LTY R G PSRF+ E P VEE + Sbjct: 613 LEEERRLFYVGITRAKDQLYLTYPRWNCRAQGGTFMQMPSRFLDEFPAGLVEEWEVE 669 >UniRef50_C9RM93 UvrD/REP helicase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RM93_FIBSS Length = 843 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 243/718 (33%), Positives = 362/718 (50%), Gaps = 47/718 (6%) Query: 4 SYLLDS-LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 +LD LN +Q A +L+LAGAGSGKTR + ++IA L+S ++AVTF Sbjct: 12 DSVLDKELNPEQAAAAKKINGPMLILAGAGSGKTRCITYKIAHLVSYHKIDSNRVLAVTF 71 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAH----------RLLRAHHMDANLPQDFQ 112 TNKAA EM+ RI +L+ + W+GTFH + +++A +F Sbjct: 72 TNKAAREMKDRIQKLLNCRKPFTWMGTFHSVCLKLLKLCLAKESVIKALGGK-WFDANFS 130 Query: 113 ILDSEDQLRLLKRLIK-AMNLDEKQWPPRQAMWYINSQKDE---------GLRPHHIQSY 162 I D +DQ R+LK ++K + D ++ I+ K+ P Sbjct: 131 IYDDDDQKRILKEILKDDLGDDYDVNELKKVHSAISRFKNTVLYKNDKAVLQTPDVAALN 190 Query: 163 GNP-VEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDE 221 E+ + Y AYQ+ + +DF +LL + P++ + RERF ++VDE Sbjct: 191 AEFADEERKARYYAAYQKKLAESNAMDFDDLLFNTVRMLQMVPNLAEQLRERFQYVVVDE 250 Query: 222 FQDTNNIQYAWIRLL-AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLE 280 +QDTN++QY ++LL DT V +VGDDDQSIYGWRGA ++ I+ F DF ++LE Sbjct: 251 YQDTNDVQYELLKLLINRDTKNVTVVGDDDQSIYGWRGANIKIIRNFHRDFAPVTIVKLE 310 Query: 281 QNYRSTSNILSAANALIENN--NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIK 338 +NYRST+NI+ A ++I +N + K +++ GE I + ++ EA + + Sbjct: 311 RNYRSTANIVKGAGSVIAHNVRPAEMQKNVFSKEEAGELIHVRYFEDDRAEASNIAKTVA 370 Query: 339 TWQDNGGA-LAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRL 397 G A+ AI YR+NAQSRVLE+AL +P I+GG RF++R+EIKD L+YLR+ Sbjct: 371 ---QAGPDFYAKTAIFYRTNAQSRVLEKALNDLRIPSVIFGGTRFWDRKEIKDVLAYLRV 427 Query: 398 IANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASA 457 +AN DDAA+ RV+NTP R IG T++ V + + + W LL E GR A Sbjct: 428 LANEKDDAAYLRVINTPPRAIGKTTVEGVLAKVKAGEGSFWD---NLLAEANGTGRGAPK 484 Query: 458 LQRFMELIDALAQE--TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTA 515 L+ F +L+ + + PL + + +I D+G + +E RI NL+E++ A Sbjct: 485 LKVFTDLVTNWKNMMTSGEYPLPILAEHIINDTGYKDFLRKEDEVTADERIANLDEMINA 544 Query: 516 TRQFSYNEEDEDLMPLQAFLSHAALEAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFIVG 574 R+F +E+ L AFL +L + DT + V LMT+H AKGLEF V + G Sbjct: 545 IREF---DEEHPGATLDAFLQDISLLTDGDKKVDTSKGLVTLMTIHMAKGLEFNTVHLAG 601 Query: 575 MEEGMFPSQMSL------DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 ++ +FP + ++EEERRL YVG TRA +KL L +AE R G Sbjct: 602 CDDEIFPLVRGTSMLSMAEINEQMEEERRLFYVGCTRAEKKLYLYHAERRFFQGNIRPFA 661 Query: 629 PSRFIGELPEECVEEVR--LRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEG 684 PSRF+ EL V+ P + G R + G G Sbjct: 662 PSRFLKELDPSVVDFTPCLNTRPSVPDFVGNTRSKPSYGSYGSSNYGSRPSYGNSGSG 719 Score = 59.7 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 642 EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVA 701 ++ + + V P +E D+ Y G RVRH+++G G I+ GSG+++R+ V Sbjct: 763 DKHIVYRNPVKVVKAPAPSGPTIEYDNPYHEGARVRHSRYGTGVIMKAYGSGDNARVDVR 822 Query: 702 FQGQGI-KWLVAAYARLESV 720 F + + + ++ YA LE + Sbjct: 823 FDRENMNRTIILKYAALEVI 842 >UniRef50_Q1CRC0 DNA helicase II n=13 Tax=Helicobacter RepID=Q1CRC0_HELPH Length = 682 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 221/722 (30%), Positives = 365/722 (50%), Gaps = 47/722 (6%) Query: 1 MDVS-YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD +L +LN Q+ A + + LL+LAGAGSGKT+ L R+A+L+ V + + Sbjct: 2 MDFEKSILGNLNGVQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGVCGVPSENTLT 61 Query: 60 VTFTNKAAAEMRHRIGQLM-GTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 +TFTNKA+ EM+ R +L+ + + TFH LR H DF +LDS++ Sbjct: 62 LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE 121 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 L K+L I+ K+ + + + K Y+ YQ Sbjct: 122 VKTLCKQL-----------KISNFRASISQIKNGMMDL-------SMQDSECYKAYELYQ 163 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 A + LVDF +LL + ++ + I + E + I+VDE+QDTN +Q +++ L+ Sbjct: 164 NALKKDNLVDFDDLLFLSLKILQDNETIAKETSEHYHYIMVDEYQDTNALQLEFLKKLSF 223 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGDDDQSIYG+RGA + NI F F GA+ ++LE NYRS++ IL+ AN+LI Sbjct: 224 THHNLCVVGDDDQSIYGFRGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLIS 283 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 +N R K L + + + + +E+ V +IK G L AILYR N Sbjct: 284 HNQHRHVKTLQSFKGSHKSVICKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNG 343 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR +EE+L ++PYR+ G + F+ER E+KDAL+++ ++A ++D +RV+N P RG+ Sbjct: 344 LSRSIEESLNALNIPYRLIGAVSFYERAEVKDALAFMHVVAKKDDRFFIKRVLNKPPRGL 403 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G T + + D L L +A + + L + AL++FM +I L + ++ + Sbjct: 404 GKITQEWIFSLLDDEGLNLEEALKLGAFKDKLNPKNEYALKKFMAMIGRLREAF-EISVE 462 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 R ++++ L YE+E + + R ++EL+T ++ L FL+ + Sbjct: 463 EFCARFLEETNLLKSYEKE--DNYEEREGFVKELLTLLKEHFKTNPTH---SLLDFLNES 517 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L+ V M++H +KGLEF VF++G+EEG FP ++ LEEERRL Sbjct: 518 VLD---VHNAENAQKVSCMSVHMSKGLEFKHVFVIGLEEGFFPH-RGFNQESDLEEERRL 573 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQR 658 AYV +TRA + L L+Y + R +G+++ PS F+ E + +++ + Sbjct: 574 AYVAITRAKEGLQLSYVKERSYFGRKISCSPSVFLEE--AQLLQQDKP------------ 619 Query: 659 MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLE 718 + D+ K+G ++H FG G ++ +E L++ G + A + +E Sbjct: 620 -PKQDHKKDTPIKVGDLIKHKIFGTGRVLGVEKGLSGLCLKINCGGNVYDKISAKF--VE 676 Query: 719 SV 720 V Sbjct: 677 KV 678 >UniRef50_A3EU22 Putative ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Leptospirillum sp. Group II RepID=A3EU22_9BACT Length = 746 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 250/748 (33%), Positives = 388/748 (51%), Gaps = 39/748 (5%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +L+ LN Q+EAV+ LLVLA AGSGKTRV++ R+ +L+ S ++ VTFT K Sbjct: 2 ILEELNPAQQEAVSHEGGPLLVLAPAGSGKTRVVIARLLYLLDRYGWSEDRLLVVTFTRK 61 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA E+ HRI +L +S+ WVGTFH +A R+LR +LP++F I+D DQL++++ Sbjct: 62 AARELLHRISRLRPSSRPS-WVGTFHSVAARMLRQQAERLDLPREFTIVDGPDQLQMIRD 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 L+ + +K+ P++ I K G+ P + ++Y AYQ+ Sbjct: 121 LLGRQGVSDKEVDPKKLAGRIGKWKSAGVDPVEAIRTTFGPFRVQAELYAAYQDNLALQK 180 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 +DF +LLL P + + Y+ +F +ILVDE+QDTN +Q +RLL+ D V + Sbjct: 181 ALDFDDLLLTLVRCLEQDPEVRETYQRQFEHILVDEYQDTNPLQERLLRLLSRDRQNVTV 240 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDDDQSIY +RGA+V +I F ++PGA + L NYRST I++AA+++I + R Sbjct: 241 VGDDDQSIYRFRGAEVGHILSFPKEYPGARQVVLTVNYRSTRPIVTAASSMISSALARYR 300 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEE 365 K + + G GEP+ L +E EARFV I+ + G + +L+R N Q++ Sbjct: 301 KDMVSTGRPGEPVFLKKLDSEWAEARFVARTIQEKVERGAMFRDQVVLFRMNVQAQPFIR 360 Query: 366 ALLQASMPYRIYGGM-RFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 A +A +P++ G + FF R+EI+D L+YLR+ AN D + R++N P RG+G++ + Sbjct: 361 AFAEAGIPFQTRGAVQGFFNRREIRDLLAYLRVSANPFDRISLGRILNVPPRGMGEKARE 420 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL-AQETADMPLHVQTDR 483 + Q + + L+ W+ L+G+A + + F ++ + Sbjct: 421 RLDQQAGNPGLSSWE--LLERLSLELSGKARESARAFANDLEEASRRVRRGDGPFSLLQF 478 Query: 484 VIKDSGLRTMY-EQEKGEKGQTRIENLEELVTATRQFSYN-EEDEDLMPLQAFLSHAAL- 540 + +G E E GE+G R ENL+EL+ + +F E D P FL AL Sbjct: 479 WLSRTGYEQWVSEGESGEEGPGREENLKELLRMSERFGDGIGELTDRTPTGVFLEELALS 538 Query: 541 EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + G+A D V L+T+H AKGLEFP V++ G EE + P + + +EEERRL Y Sbjct: 539 QEDPGEAGESPDRVSLLTIHQAKGLEFPHVYLAGAEEDILPMK--SRDKVDVEEERRLFY 596 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG 660 V +TRA L +T+ TR+L+G+ RPSRF+ ++P E V+ R PVS Q Sbjct: 597 VAMTRARDSLAITWCLTRQLFGRTESPRPSRFLRDIPPEAVQGDRPVFRPETPVSRQTSE 656 Query: 661 -----------------------------TPMVENDSGYKLGQRVRHAKFGEGTIVNMEG 691 +P E +G+ V H +FG G + G Sbjct: 657 LPPRKVFPPPSLAPSRPATSLRSVPEKRTSPPTEVLRPEWIGKTVVHPRFGRGRVEEAHG 716 Query: 692 SGEHSRLQVAFQGQGIKWLVAAYARLES 719 G L + F+ G++ L+ +A L+ Sbjct: 717 EGGDLELSIRFESSGVRRLLERFANLQV 744 >UniRef50_P45612 Probable DNA helicase II homolog n=4 Tax=Mollicutes RepID=UVRD_MYCCT Length = 722 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 222/719 (30%), Positives = 375/719 (52%), Gaps = 26/719 (3%) Query: 16 EAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIG 75 AV + ++AGAGSGKTRV+ +IA+L+ +N P I+AVTFTNKAA EM+ R+ Sbjct: 16 AAVLNIDKPVRIIAGAGSGKTRVITTKIAYLIEKQNIDPSRILAVTFTNKAAKEMKERVL 75 Query: 76 QLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLD-- 133 Q+ S ++ TFH ++LR L F I+DS+DQ R++K +K N++ Sbjct: 76 QITNNSFKSPFISTFHSWCSKVLRIDGKHIGLEDKFLIIDSDDQKRIIKSALKESNIELS 135 Query: 134 --EKQWPPRQAMWYINSQKDEGLRP-HHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFA 190 +K+ ++ ++ I K+E + P I + + +E+ + +Y+ YQ + +DF Sbjct: 136 ENDKKTFDKKILYKIKEWKEELVDPSEAILNATSTLEKNFAVIYRLYQNTLLKNNSLDFD 195 Query: 191 ELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDD 250 +L + + L+ IL +R + +LVDEFQDTN +Q++ I+ L +T + +VGD D Sbjct: 196 DLQIYVYRLFKQNNEILNKWRNAYDYVLVDEFQDTNELQFSLIKFLTINTNHLTVVGDPD 255 Query: 251 QSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWT 310 Q+IY WRGA+++ I F + A +I L QNYRST IL +N+ I+NN R K+++T Sbjct: 256 QTIYSWRGAKLDIILNFNKTYSNAISIVLNQNYRSTKQILDISNSFIKNNKFREHKEIFT 315 Query: 311 DGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQA 370 + G+ + L ++ EA +V ++IK G + ILYR NA S+ E+ L Sbjct: 316 NNKSGKKVVLKECNSKTSEASYVSSKIKELVKQGYHYKDIFILYRMNAWSQEFEKELANK 375 Query: 371 SMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTS 430 +P+++ GG++F ER+ IKDA+++L++I+ D+ + +RV+ + IG+ T++ + T+ Sbjct: 376 KIPFQLIGGIKFRERKVIKDAMAFLKMIS-IKDNLSSQRVLGLIPK-IGNITIEKIINTA 433 Query: 431 RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE-TADMPLHVQTDRVIKDSG 489 L ++ ++K L L +E+ Q + + ++ SG Sbjct: 434 NLNHLNIFDLITN--EDKTLLHSITKNLDELIEVFKTAHQLYLDNTNIEEILKYLLIQSG 491 Query: 490 LRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDE---DLMPLQAFLSHAALEAGEGQ 546 + K + +EN+ L ++F + + + + L AFL AL + + Sbjct: 492 YENKLKIRKEQDD---LENINALYDQLKRFDEDFDPKYYSEENKLIAFLQEEALTSDIDE 548 Query: 547 ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRA 606 A+ D V L+T+H+AKGLE VFI G+ +G+FPS++S LEEERR YV +TRA Sbjct: 549 AEQI-DKVSLLTVHAAKGLENKVVFITGLNQGIFPSRISETSINELEEERRALYVALTRA 607 Query: 607 MQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE---EVRLRATVSRPVSHQRMGTPM 663 +L LTY + + + +PS+FI EL ++ E + Q Sbjct: 608 KDELFLTYVKGDYSHIMQSELKPSKFIHELDKDLYEFETQFLNTLLYDSNDYKQSSFYVS 667 Query: 664 VENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG--QGIKWLVAAYARLESV 720 + + Y +G V H FG+G +V + + +LQ++F GI + + L V Sbjct: 668 PKQHNLYNVGDHVEHKLFGKGVVVKI----INDQLQISFTNSSYGIMMIATNNSALSKV 722 >UniRef50_P57654 ATP-dependent DNA helicase rep n=4 Tax=Buchnera aphidicola RepID=REP_BUCAI Length = 645 Score = 702 bits (1813), Expect = 0.0, Method: Composition-based stats. Identities = 233/645 (36%), Positives = 356/645 (55%), Gaps = 10/645 (1%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 SLN Q+ AV L+LAGAGSGKT+V++++I +L++ P +I AVTFTNKAA Sbjct: 2 SLNFSQKNAVELTNGPCLILAGAGSGKTKVIINKIIYLINHCQYEPDNIAAVTFTNKAAY 61 Query: 69 EMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ + + + + TFH L +++ L +F +LD +DQ+ LLK++ Sbjct: 62 EMRIRLSKYLNIPEIKKIIISTFHSLGLEIIKKEIDALELNNNFTLLDEKDQILLLKKIC 121 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYG-NPVEQTWQKVYQAYQEACDRAGL 186 K + ++ + I+ K++ L P +Q + E+ + VY+ Y +A + Sbjct: 122 KK-EIKNNIQLLKKLNFMISYWKNKFLTPLQVQLLAKSSQEKDFAYVYEQYTNYLYKANI 180 Query: 187 VDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIV 246 +DF +L+ L N I ++++ + +LVDE+QDTNN QY I++LA +V Sbjct: 181 LDFDDLICMPTLLLKNNKKIKIRWQKKISYLLVDEYQDTNNSQYELIKMLANKNSDFTLV 240 Query: 247 GDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGK 306 GDDDQSIY WRGA +NI DFP + I++E NYRS+ IL AAN+LI NN L K Sbjct: 241 GDDDQSIYSWRGANPQNIFLLKKDFPNLKIIKMEHNYRSSGRILKAANSLIANNIHYLEK 300 Query: 307 KLWTDGADGEPISLYCAFNELDEARFVVNR-IKTWQDNGGALAECAILYRSNAQSRVLEE 365 KL++ G I + NE +EA+ +V + I + + AILYR N QSR+LE+ Sbjct: 301 KLFSQLKYGNLIKVLIGKNEENEAQKIVKKIISQYAKKKIKYRDFAILYRGNYQSRILEK 360 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 AL++ ++PY I FF R EIKD LSYLR++ NR+D+ AF R+VN P+R IG TL Sbjct: 361 ALIKENIPYNISEKSSFFSRPEIKDLLSYLRVVINRDDNHAFMRIVNIPSRQIGKTTLKK 420 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + + + + ++L+QA + +K L ++ F+ I+ + + D ++ Sbjct: 421 LEEWANKKHVSLFQASNNIEIKKFLNENTIKKIKNFISKIEKFTAWSC-LKPSNIIDDIV 479 Query: 486 KDSGLRTMYEQ--EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAG 543 D + + K + I N+ L + ++ E M L ++ + Sbjct: 480 DDLEYEKWLSKFLKDPNKIKNSINNVHTLSQWFKNMIKGDDFEKPMTLFQIVTRMTIRDI 539 Query: 544 EGQA--DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 QD VQLMTLH++KGLEFP VFI+GM EG+ P+Q S+D +EEERRL YV Sbjct: 540 LDDNIIKEQQDRVQLMTLHASKGLEFPAVFIIGMCEGILPNQKSIDN-DNIEEERRLTYV 598 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRL 646 G+TRA ++L TY R YG+ + PSRF+ ELP+E ++ + Sbjct: 599 GITRAKKQLFFTYCYKRTQYGQILDMLPSRFLFELPQEDLKWEKK 643 >UniRef50_Q123W9 UvrD/REP helicase n=16 Tax=cellular organisms RepID=Q123W9_POLSJ Length = 716 Score = 701 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 220/659 (33%), Positives = 333/659 (50%), Gaps = 36/659 (5%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN Q+EAV LVLAGAGSGKTRV+ H+I L+ I A+TFTNKAAA Sbjct: 24 GLNLAQQEAVNYLHGPCLVLAGAGSGKTRVITHKIGRLIQS-GLKAEQIAAITFTNKAAA 82 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EMR R L+G G+ + TFH L R+LR L Q F ILDS+D + ++K Sbjct: 83 EMRERAKSLIGKQAKGVLICTFHALGVRMLRQDGQALGLKQQFSILDSDD----VTSILK 138 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY-GNPVEQTWQKVYQAYQEACDRAGLV 187 RQ W I++ K +GL + N E+ +V Y+E V Sbjct: 139 DAGGSTDVATARQWQWTISAWKGQGLNAAQAAAQASNDEERLVARVMAHYEERLTAYQSV 198 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ +L + +++ ++LVDE+QDTN QY ++LL G G+ VG Sbjct: 199 DFDDLIGLPLKLLREHEAVRNKWQQSLGHVLVDEYQDTNATQYEVLKLLVGTRGRFTAVG 258 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA ++N+++ D+P + ++LEQNYRSTS IL AAN +I N K Sbjct: 259 DDDQSIYGWRGATLDNLKKLPEDYPNLKVVKLEQNYRSTSAILRAANNVIGPNPKLFPKT 318 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG---------GALAECAILYRSNA 358 L+++ +GEP+ + +E EA VV RI++ + G + +LYR+N Sbjct: 319 LFSELGEGEPVRVVDCDSEEHEAERVVARIQSLRAGGELQAVGSQYKEWKDFCVLYRANH 378 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 Q++ LE+A +A +PY++ GG FF+R EIKD S++ L+ N +++ AF R V TP RGI Sbjct: 379 QAKPLEKAFRKAQIPYKVSGGQSFFDRAEIKDLCSWMVLLVNNDNNPAFMRSVTTPKRGI 438 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDAL----AQETAD 474 G TL + + +L+L++A L +A +LQ F ++ L + Sbjct: 439 GHTTLGTLGTFADQYKLSLFEALFSNSLSSVLPAKAVGSLQEFGRYLNELEYRARRTVGA 498 Query: 475 MPLHVQTDRVIKDSGLRTMYE--QEKGEKGQTRIENLEELVTATR--------QFSYNEE 524 + +K+ ++ + R N+ + S Sbjct: 499 EDARTFLNDWLKEIDYEKHLYDGEDSEKVAAARWSNVMDFCDWMALRCGGQIDDTSGAVV 558 Query: 525 DEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM 584 + + + + AL + + + Q+ V L TLH++KGLE+P V + G EG+ P ++ Sbjct: 559 ESEKKTMLEVVQTIALLSTISEREGDQNVVTLSTLHASKGLEWPHVMLAGCNEGLLPFKL 618 Query: 585 SLDEGGR-------LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 D+G L+EERRL YVG+TRA + L + + R+ + PSRFI E+ Sbjct: 619 EEDDGSNTDNIALRLQEERRLMYVGITRAQRTLAVNWLRRRKKNRDTIAGIPSRFIAEM 677 >UniRef50_B0P0N3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0P0N3_9CLOT Length = 745 Score = 699 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 229/733 (31%), Positives = 372/733 (50%), Gaps = 33/733 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL LN KQ EAV + + V+AGAGSGKTR L HR A+L++ P +I+ VTF Sbjct: 29 LDQLLCQLNQKQLEAVTSTEGFIRVIAGAGSGKTRALSHRFAFLVNEIGILPGNILCVTF 88 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EMRHRI L+ + G ++ TFHG +L+ P++F +LD++D + Sbjct: 89 TNKAANEMRHRIHNLIADNDTG-YINTFHGFCVSILQEDSHAVQYPKNFLVLDNQDIDSM 147 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK---------- 172 LK + + L + +A I K E P++ T ++ Sbjct: 148 LKIIYEERGLTLRHKTFSKARDMIEMYKLERY-PNYYLDLITMSLDTLRQKYLGATDVND 206 Query: 173 -VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYA 231 ++ Y + +D+ +LL + ++ I +++R I++DEFQD + IQY Sbjct: 207 IIFYGYLYQEKKCFGLDYNDLLKFSLYIFEKNKEIRLKWQKRLEYIMIDEFQDIDKIQYQ 266 Query: 232 WIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILS 291 +++L G + IVGD DQ+IY WRGA + + F FP +TI + +NYRST ILS Sbjct: 267 LMKVLCGYHKNLFIVGDPDQTIYSWRGADINYLLNFDKAFPDVKTIMMNENYRSTPQILS 326 Query: 292 AANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECA 351 N+LI+ N R+ K L + Y +E+ ++ ++I + + Sbjct: 327 VCNSLIDKNKNRMKKDLLPMCHSKNSVLYYHGDTSEEESDWIADQIIKLHKKDISYKDIT 386 Query: 352 ILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVV 411 ILYR++ +R LEE LL+ +PY IY G++FFER E+KDALSYLR+I DD +F R+V Sbjct: 387 ILYRAHYVTRTLEETLLKKKIPYSIYSGIQFFERMEVKDALSYLRMIT-YKDDLSFLRIV 445 Query: 412 NTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQE 471 N P R IG + ++ ++ + ++A +E +++ G A F+ LIDA + Sbjct: 446 NVPKRNIGKKRMEFLQAYVNAHHCSFYEALKECVEDPIFKGTDAK---DFISLIDAFSVT 502 Query: 472 TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPL 531 + ++ SG M ++ R++NL EL A + + +E L L Sbjct: 503 YEQRTISEVLSDILDRSGYEEMLRTTGNQE---RLDNLAELKQAVYDYEISCGEEAL--L 557 Query: 532 QAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 +L H AL D D V+LMT+H+AKGLEFP VF+ + EG+FPS+ + Sbjct: 558 PDYLDHIALFTNSDVTDD-SDKVKLMTVHAAKGLEFPHVFLCALNEGIFPSKKTS-TIEG 615 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE-----EVRL 646 +EEERRLA+V ++RAM+ L L+ + + G Y PSRFI ++ ++ +E E L Sbjct: 616 MEEERRLAFVAMSRAMKSLFLSESHGKNFDGSTRY--PSRFILDIDQKFLEYVKKPEDTL 673 Query: 647 RATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQG 706 A + + + +++G ++ H FG+G I ++ + + + F+ Sbjct: 674 IAETKNYIHYSNRYLDGYVAEQTFQVGDKIIHNVFGQGRIKSI--LSDRNAYMIKFEQIE 731 Query: 707 IKWLVAAYARLES 719 +++ ++ Sbjct: 732 TPRIISFRVPIKR 744 >UniRef50_Q8D2T2 UvrD protein n=1 Tax=Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis RepID=Q8D2T2_WIGBR Length = 719 Score = 696 bits (1798), Expect = 0.0, Method: Composition-based stats. Identities = 323/723 (44%), Positives = 481/723 (66%), Gaps = 11/723 (1%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M ++L +LNDKQ+E + + N+LVLAGAGSGKT+VL ++IAWL+ V+ SIMAV Sbjct: 1 MKNNFLTKNLNDKQKEIITSSYKNILVLAGAGSGKTKVLTNKIAWLIDVKKYHSSSIMAV 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNK A E+ +R+ L+ + +W+GTFHGL+++LL H+ ++ L ++FQI+DSEDQL Sbjct: 61 TFTNKGAKEIINRMKFLI-KNLKDIWIGTFHGLSYKLLCMHYTESKLFKNFQIIDSEDQL 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQAYQE 179 +L+ ++ +M L+ + YI + KD+G+RP + + N + K+Y+ YQ Sbjct: 120 KLIHQINLSMKLNFNNKSYHNILEYIRNYKDKGIRPSFCEININNKKNILYNKIYKEYQT 179 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 CD+ GL+DF+ELLLR +EL++N I + Y+++F ILVDEFQDTN+IQY+WI+ + Sbjct: 180 TCDKLGLLDFSELLLRINELFINNKSISKFYKKKFKYILVDEFQDTNDIQYSWIKNFSSK 239 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 +MIVGDDDQSIYGWRGA+ EN++ F+NDF + I+L+QNYRST+NIL AAN+LI N Sbjct: 240 ECFIMIVGDDDQSIYGWRGAKSENMKNFINDFSRTKIIKLQQNYRSTNNILQAANSLIMN 299 Query: 300 NNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNA 358 NN R+GKKLWT+ G+ I++Y A+NE DE+ F++ I + E AILYR N+ Sbjct: 300 NNLRIGKKLWTEKKSGDLITIYQAYNEKDESNFIIKYILNNQKKLNNKKKEYAILYRKNS 359 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 QSR LEE LL+ ++ Y IYGG++FF RQEIK+ L+Y RLI N+ DD ++ER++N P R I Sbjct: 360 QSRSLEENLLKNNLKYDIYGGLKFFSRQEIKNTLAYFRLIVNKKDDLSYERIINFPKRKI 419 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G++TL ++ S++++L+LW++ + L + +L+ F LID L + ++ LH Sbjct: 420 GEKTLKKIKNISKNKKLSLWES-TNFFIKNNLNDAKSFSLKNFFYLIDYLKENIKNLSLH 478 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 + + VIK SGL YE+EK +RI+N +ELV + +QF + E +++ L+ FL+ + Sbjct: 479 EKFNFVIKKSGLLNFYEKEKKNINNSRIDNWQELVNSAKQF-FIENNKEKNILEKFLAFS 537 Query: 539 ALEAGEGQADTWQD-AVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERR 597 LE+ + ++ ++LMTLHS+KGLEFP VFI+GMEEG+FP+ + + +LEEERR Sbjct: 538 TLESERYTSYDDENYKIKLMTLHSSKGLEFPIVFIIGMEEGLFPNIIYSNNKEKLEEERR 597 Query: 598 LAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC--VEEVRLRATVSRPVS 655 LAYVG+TRAM+KL +TY + R +YGK + PSRFI E+P + T + Sbjct: 598 LAYVGMTRAMKKLVITYVKYRNIYGKIIKREPSRFIEEIPSHYKKIIYENKTNTSKNEIK 657 Query: 656 HQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYA 715 + Y++G++V H KFG G I+++E ++ L++ F+ GIK LVA YA Sbjct: 658 KDNYYYTTNNTKNNYEIGKKVFHPKFGFGLIIHIE---KNKILEIKFKKIGIKKLVAKYA 714 Query: 716 RLE 718 RLE Sbjct: 715 RLE 717 >UniRef50_B2IL96 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2IL96_BEII9 Length = 730 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 250/691 (36%), Positives = 359/691 (51%), Gaps = 51/691 (7%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 L L +Q EA +AP ++VLAGAG+GKT L + ++VE S I+AVTFTNK Sbjct: 65 LTQGLTPRQIEAASAP-GAVVVLAGAGTGKTSTLTCAVVHRIAVEGLSASRILAVTFTNK 123 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA+EM RI + W+GTFHGL R LRA A L +F+ILD++D RL+KR Sbjct: 124 AASEMSDRIRAALQGGSTPSWLGTFHGLGARQLRAEPEVAGLRPNFEILDADDSRRLIKR 183 Query: 126 LIKAMNLDEKQ-------WPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTW-------- 170 +++++NL+ + P ++ + I+ KD L P +Y Sbjct: 184 IMQSLNLNTDEQDNESGPEPIKRMINQISKFKDLLLSPDEAPAYVQKKIAEANAIGEPIH 243 Query: 171 -------QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQ 223 ++Y YQ+ DF +LLL L + RF IL DE+Q Sbjct: 244 PASLFNAARIYALYQQRLRDQNSADFGDLLLWPTRALLRDAAYRTRWARRFDCILADEYQ 303 Query: 224 DTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNY 283 D N QY W+R LA + ++ VGDDDQ+IYGWRGA + I+RF DFP A IRLE+N+ Sbjct: 304 DVNYAQYQWLRALAFEHHRIFCVGDDDQAIYGWRGADITYIRRFTQDFPQASVIRLEENF 363 Query: 284 RSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN 343 RST IL++ANA+I + RLGK L+T+ G+PI + EA +V IK Sbjct: 364 RSTGAILASANAVIARDPHRLGKTLFTNKGYGQPIEVVAYRYCDGEAHGIVEEIKKRHAE 423 Query: 344 GGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRND 403 G AE AILYR+N SR EE L++A +PY I G + F++R EIKD L++LR+ +D Sbjct: 424 GVDFAEMAILYRNNFFSRGFEECLVRAKIPYVIVGDVGFYQRAEIKDTLAFLRIATTPDD 483 Query: 404 ---DAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 D A RV+N P RG G + + ++ + + R L+L++A + L+ A Sbjct: 484 RQSDEALRRVINEPRRGFGKKAMAILEEEANFRHLSLFRAI----ETATLSSACRKAGLM 539 Query: 461 FMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 F+ I+ +A++ + L Q ++ +G R M + K E G+ R+EN+ EL+ F Sbjct: 540 FVAAIEKVAKD-PSLTLADQLSLLLDATGYRAMLQASKAEDGKARLENISELLHLAGSFH 598 Query: 521 YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMF 580 E L HAAL + + + ++LMTLH +KGLEF VF+ G E+G+F Sbjct: 599 DAHE---------LLDHAALASSRPNENE-EGRLKLMTLHKSKGLEFEHVFLPGWEDGIF 648 Query: 581 PSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 P+ S L+EERRLAYV +TRA ++ +TY E RR PS FI ++P + Sbjct: 649 PAGNS-----DLDEERRLAYVAITRAKRRAAITYCEYRRG-----LADPSSFIADIPPQH 698 Query: 641 VEEVRLRATVSRPVSHQRMGTPMVENDSGYK 671 E LR PV +R Sbjct: 699 RIEGWLRDDGLPPVQRERKANAWHNPRRARS 729 >UniRef50_A5EW07 DNA helicase UvrD n=2 Tax=Dichelobacter nodosus RepID=A5EW07_DICNV Length = 664 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 248/671 (36%), Positives = 351/671 (52%), Gaps = 11/671 (1%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 + D LN +QR AV S LLV+AGAGSGKT V+ +IA+L+ + ++ AVTFTNK Sbjct: 1 MFDQLNPQQRAAVLYLDSPLLVIAGAGSGKTGVITEKIAYLIESAHYDAPNVCAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 AA EM R + G+ + TFH L +L AN + F I D D L LL+ Sbjct: 61 AAREMLARSRARLKKRAHGLTIATFHRLGLMMLERDFAKANRRRGFSIFDQHDSLTLLRE 120 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY--GNPVEQTWQKVYQAYQEACDR 183 L ++ R+ +I++ K+ + P S + K+Y AY E Sbjct: 121 LCH----NDDDAFLRRMQQHISAFKNANVLPEETASLMIDDETAAQAAKIYCAYCERLQA 176 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 VDF +LLL L + ++E+ + VDE+QDTNN QYA ++L+ G G + Sbjct: 177 YNAVDFDDLLLLPTRLLKTDAAVRGFWQEKIRYLFVDEYQDTNNCQYALMQLIVGAGGAL 236 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 VGDDDQSIY WRGAQV+N+Q D+P I+LEQNYR IL AAN LI +N Sbjct: 237 TAVGDDDQSIYAWRGAQVKNLQYLQEDYPQLHIIKLEQNYRCHHKILQAANTLIAHNPHL 296 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRV 362 + K+LW+ G+ + ++ A N+ EA + + I + A A+LYRSN Q+R Sbjct: 297 VEKRLWSQLERGDGVCVFAARNDEAEAERIASAIYQQKLRTQAAWQNFAVLYRSNFQARA 356 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 +E+AL S+PY+I GG F+E EI+D L+YLRLI N DDAAF R+ N P R IG +T Sbjct: 357 IEQALRDVSIPYQISGGTSFYEHSEIRDLLAYLRLINNPEDDAAFLRICNVPKREIGTKT 416 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 L V+ + + RQ L+ A EL L+ RAA ++Q+F + I+ +E Sbjct: 417 LTVLGEYAAKRQCCLFYAATELGLATLLSARAAMSVQQFCQWIEEKQKEAETALPSALLQ 476 Query: 483 RVIKDSGLRTMYE-QEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 VI + R E E K + R +EEL+ + E+E L + H L Sbjct: 477 TVIDEVAYREYIEANEAPAKAEKRWARVEELIAWLVRLE---EEERYQSLAGLMRHVLLL 533 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV 601 D +D VQLMTLH+AKGLEFP V+I G+EE + P + + EERRL YV Sbjct: 534 DILEHQDKQKDGVQLMTLHAAKGLEFPYVYIAGVEEDLLPHHHCGESEEAIAEERRLLYV 593 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGT 661 G+TRA +LTL+YA+ RR SRF+ ELPEE ++ R + +++ Sbjct: 594 GMTRAKFQLTLSYAKQRRHGKNWEASTASRFLQELPEEGIDWQDGRRAIDEQALNEKREE 653 Query: 662 PMVENDSGYKL 672 +++ Sbjct: 654 MFSTLRQMFEM 664 >UniRef50_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RXK7_OSTLU Length = 657 Score = 695 bits (1795), Expect = 0.0, Method: Composition-based stats. Identities = 218/667 (32%), Positives = 346/667 (51%), Gaps = 25/667 (3%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND QR AV AP VLAG GSGKT VL+ R+A L+ P I+ +TFTNKAA E Sbjct: 1 LNDDQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHELKTPPREILCITFTNKAARE 60 Query: 70 MRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRLLKR 125 +R R+ +G + + GTFH +A R+LR H +F I D++D ++++ Sbjct: 61 LRERLRDKIGDAAAREITAGTFHSVAARMLRRHGDRIPGIGRTGEFTIYDADDSKQIVQG 120 Query: 126 LI-KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 ++ +K P +I++ K + P + + + Y Y+ +A Sbjct: 121 VLVNKFGETKKTAQPGPMRNWISTSKSCPIPP--------MSHERFVECYDEYELGLRQA 172 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF +LL + P + +Y R++ +LVDEFQDT+ QY IR L+ G V Sbjct: 173 NAFDFDDLLSATVAMLEMCPDVRSYYEHRWSQVLVDEFQDTSTTQYELIRKLSQPQGSVF 232 Query: 245 IVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRST+ I+ AA A+I+ + Sbjct: 233 VVGDADQAIYGWRGAEVANIRTQFDEDFKDVQTHMLTTNYRSTATIVEAAQAVIKESAFP 292 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNG--GALAECAILYRSNAQSR 361 L + G +++ A ++ +EA F+ + +E A+LYR+N+Q+R Sbjct: 293 SPLDLVANTPGGRDVAIVEANDDREEAEFIALEARKSVKEDPDLRYSEIAVLYRTNSQAR 352 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 VLEEA ++A +P+++ G F+ R+EIKD ++YLR+++N D + R++NTPTRGIG+ Sbjct: 353 VLEEAFIRAGVPHKVIGDTSFYGRKEIKDMIAYLRVVSNSADTVSLNRIINTPTRGIGNS 412 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQT 481 T++ + T +E L RA SA+ +F +L+ ++ Sbjct: 413 TIEKLSAWIDTLPKTDGTELLPSAEEMGLTTRARSAVLKFSQLMAETREKAKSSTPGELL 472 Query: 482 DRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQF-----SYNEEDEDLMPLQAFLS 536 + +IK +G T+ + + G R ++EL+ ++ ++ L L +FL Sbjct: 473 EAIIKCTGYDTLVQ--DADDGNERWAFVQELINLAKEPPQDIDETIQDRVGLEALGSFLE 530 Query: 537 HAALEAG-EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +L E + + D V+LMT+H++KGLEF VFI G+EEG+ P + D +EE Sbjct: 531 GISLLTSAESKEEEGGDTVKLMTMHASKGLEFNSVFISGVEEGLIPFVRNGDSEDDQDEE 590 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKE-VYHRPSRFIGELPEECVEEVRLRATVSRPV 654 RL YVG+TRA +KL L +A RR +G+ R S + + + +VS P Sbjct: 591 VRLFYVGITRAKRKLMLCHARERRRFGQSAQPARRSFLLDSISAMLTGSKKPERSVSIPS 650 Query: 655 SHQRMGT 661 + + T Sbjct: 651 TSRGKAT 657 >UniRef50_C3XD55 ATP-dependent DNA helicase n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XD55_9HELI Length = 711 Score = 694 bits (1793), Expect = 0.0, Method: Composition-based stats. Identities = 225/721 (31%), Positives = 363/721 (50%), Gaps = 37/721 (5%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +L+SLN Q+EA + LL+LAGAGSGKT+ L R+A+L+ + + +TFTN Sbjct: 2 DILESLNAAQKEAAIHVDNALLILAGAGSGKTKTLTTRLAYLL-SIGIPAQNTLTLTFTN 60 Query: 65 KAAAEMRHRIGQLMG----TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 KAA EMR R +L+ + TFH L+ + + F ++D +D+ Sbjct: 61 KAAREMRERALKLIESMSIPMINTPLLCTFHKFGLLFLQRYIHLLSRNSMFNVIDEDDKR 120 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 ++++ + K K+ P I+ K+ + P + + ++ +YQ Y++ Sbjct: 121 KIIRNIKKNSKNIAKELTPATLSSAISDYKNNAILPDIAKQSPSMIDAQVAMIYQKYEDY 180 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 LVDF +LLL + + + ++ I+VDE+QDTNN+Q + ++LL Sbjct: 181 LYANNLVDFDDLLLLPYRILYENETLRTQISNKYQYIMVDEYQDTNNLQASLLKLLCATH 240 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + +VGDDDQSIY WRGA +ENI F F + ++LEQNYRST IL+ AN LI +N Sbjct: 241 ENLCVVGDDDQSIYSWRGANIENILDFDAQFENTKIVKLEQNYRSTEEILTIANNLISHN 300 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 R K L +G+ + + ++ E + ++ I+T G + + AIL+R N + Sbjct: 301 TTRYDKILKATRHNGKKVQYIKSHDDKAEMKQIIESIQTLIAQGESYNDIAILFRLNTFA 360 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 R +EE + + +++ G +RF++RQEIKD L+YLRL N +D+ + ER++N P R IG+ Sbjct: 361 RHVEECFNRTKISFKMVGVIRFYDRQEIKDVLAYLRLALNLDDNFSLERIINQPKRSIGE 420 Query: 421 RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ 480 +T + + +++ A + Q + + + L F LI++L + P + Sbjct: 421 KTFGDIVA-ASMHYTSIYAAWK---QGGLSSLKCHAKLSEFFTLIESLRECLQLNPSEIP 476 Query: 481 TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDL----MPLQAFLS 536 K + E + R +N++EL F E D +QAFL+ Sbjct: 477 HFFKTKIKLYADDIPTKDSESNEDRRKNMDELFATLLDFIECERGGDYASNEEIIQAFLN 536 Query: 537 HAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFP----SQMSLDEGG-- 590 AL + D + V M++H++KGLEF VF++GME+G+FP +MS+D Sbjct: 537 DIALSSSSDIED--SNHVLCMSVHNSKGLEFKHVFVIGMEQGLFPLMNFYEMSIDSVDKN 594 Query: 591 --RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRA 648 L+EERRLAYV TRA LTL+YA+ R +G+ PS+F+ E + Sbjct: 595 TQNLDEERRLAYVAFTRAKDTLTLSYAKKRMHHGRYREFEPSQFLVE------------S 642 Query: 649 TVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIK 708 V + + + +G K G V+H FG G I ++ G G++S V F G K Sbjct: 643 GVVSKQNARLRDEESDKCVAGLKRGDCVQHKIFGFGRIESVRGLGDNSTAMVNFG--GTK 700 Query: 709 W 709 Sbjct: 701 R 701 >UniRef50_A2QP78 Contig An07c0280, complete genome n=8 Tax=Trichocomaceae RepID=A2QP78_ASPNC Length = 1003 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 215/684 (31%), Positives = 340/684 (49%), Gaps = 58/684 (8%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ +LD LN Q AVA+P L VLA GSGKT+ L R+A+L++ P ++ TF Sbjct: 1 MAPILDGLNSAQTAAVASPAPILQVLAPPGSGKTKTLTARVAYLLAHHGYRPQDVICCTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 T KA+ EMR R+ +L+G + +GTFH + R L + L + F I DS D L Sbjct: 61 TIKASREMRERLAKLIGDELQKKLILGTFHSICRRYLVTYGYLIGLKKGFGIADSGDSLA 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-----VEQTWQKVYQA 176 ++KR++K + + P A I+ QK G+ P + + N ++ + +VY+ Sbjct: 121 IIKRIVKRLQVG---IQPNAARARISHQKAHGVSPDELAAKLNKNSKVLEQREFVQVYRE 177 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y+ + L+D+ +LL+R EL P + + + +LVDEFQDTN+IQY + L Sbjct: 178 YEANLAASNLLDYDDLLVRCVELLRKHPQCVSNVQA----VLVDEFQDTNHIQYELMNLF 233 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A ++ +VGD DQSIYG+R A+++N+ R + + LE NYRS+ ILS+A + Sbjct: 234 ASQNQRITVVGDPDQSIYGFRSAEIKNLGRMQQLYKDTSIVLLEDNYRSSGCILSSAQDV 293 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD---NGGALAECAIL 353 IE ++ R KKL + G L N EA ++V IK ++ AIL Sbjct: 294 IEQDSSRPAKKLQPTHSLGTMPVLRKLPNSESEALWIVLEIKRCIALTGKLVNYSDFAIL 353 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 RS A SR +E + + +PYR+ GG+RFF+R EIK L YLR+I+ + A R++N Sbjct: 354 LRSAALSRQIEAQMGKHGIPYRMVGGLRFFDRVEIKLLLDYLRVISQPGNTDALLRIINV 413 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDAL 468 P+R +GD +++++ + + + LW +++ Q EK+L+ A + L + LI++ Sbjct: 414 PSRKLGDESVNLLTKGAEKAKKPLWDFIKDVAQGRSSTEKSLSKPADNGLCTLVGLIESA 473 Query: 469 AQET----ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQ------ 518 Q+ D +IK R + G + R N+EEL+T Sbjct: 474 RQKLCECTDGSSPRKLLDFLIKKLSFREYLKALHGSNEENRWANVEELLTQADDTPGPEN 533 Query: 519 -------------FSYNEEDEDLMPLQAFLSHAALEAGE-----GQADTWQDAVQLMTLH 560 + L FL++ AL + + + V + T+H Sbjct: 534 EAENDENLPEIQGLEQQQAHPGEEALSRFLANVALSTEVLPQEGEEGEQSDEKVTISTIH 593 Query: 561 SAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRL 620 +AKGLE+P VF+ + G+ P + D +EERRL YV +TRA L L+Y + Sbjct: 594 AAKGLEWPVVFVPAVLNGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSYPLRQSR 649 Query: 621 YGKEVYHRPSRFIGELPEECVEEV 644 G+E S F+ P + VEE Sbjct: 650 DGEEATL--SSFL---PSKLVEER 668 >UniRef50_Q6MND7 ATP-dependent DNA helicase n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MND7_BDEBA Length = 672 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 233/684 (34%), Positives = 362/684 (52%), Gaps = 21/684 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 MD LN +Q++AV LL+LAGAGSGKT VLV R L+S I + Sbjct: 1 MD---WFKGLNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQAQEICVL 57 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA E++HR+G +G+S GMW GTFH ++LR H A L F I+D D Sbjct: 58 TFTNKAARELKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHKHAGLSPYFGIVDQSDCN 117 Query: 121 RLLKRLIKAM-NLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQE 179 ++K LIK + N + ++ + + IN ++ G+ P + + + + + + Sbjct: 118 AIVKDLIKDIKNSGKDKFDADKILNMINDRR-TGMAPQ--TEAFDEYHEMVEVLTPKFTK 174 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 + G+VDF LL++ L+ P IL+ + FT ++VDEFQDTN +Q I + Sbjct: 175 RLEHLGVVDFEGLLIKPITLFKENPEILEKVQGMFTQVMVDEFQDTNRLQMDLIAQIVKS 234 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIEN 299 + +VGDDDQSIYGWRGA+V+NI F +F E I+LE+NYRS++ IL+ ANA I Sbjct: 235 HNNIAVVGDDDQSIYGWRGAEVKNILNFPQEFTPCEVIKLERNYRSSAEILAVANAAISK 294 Query: 300 NNGRLGKKLWTD--GADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 N R GK L G+ L+ E DE FVV I +Q G + + A+LYRSN Sbjct: 295 NKNRHGKILRPQVAEDTGQLPELFILDREEDECEFVVTEILNFQRQGYSYKDMAVLYRSN 354 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 Q ++E +L +A++PY I GG F+R+EIKD ++YL+ N + + R++N P+RG Sbjct: 355 TQGGLIESSLRRANVPYHISGGTSIFDRREIKDLMAYLKQALAPN-EVSLRRIINVPSRG 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETAD--- 474 IGD +++ + + + +++ ACR QE + +A +A+ M I+ L + D Sbjct: 414 IGDTSIEKLSEFALKKRINFVDACR-FWQEAGVQDKAGAAIDDLMMFIENLPKNILDFQV 472 Query: 475 -MPLHVQTDRVIKDSGLRTM-YEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + ++ +D G R Y + + E++ D+ ++ Sbjct: 473 GSSPGAKMVQIFQDIGYREYVYGTAADPTSAEKKWMVVEILGRILDSFLGRRSYDVENIK 532 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 +F+ L + + ++ VQLMTLH++KGLEFP V + G+EE + P + G + Sbjct: 533 SFVD-CMLLRDDLSEEELENKVQLMTLHASKGLEFPVVILAGLEEDLLPHKN---LGSDI 588 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 +EERRL YVGVTRA ++L ++ + R+ G PSRF+ ELP+E E L A Sbjct: 589 DEERRLFYVGVTRAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARPVV 648 Query: 653 PVSHQR-MGTPMVENDSGYKLGQR 675 + + + + + DS G++ Sbjct: 649 GQEREDLVASFLSKLDSKLGTGKK 672 >UniRef50_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri RepID=Q018Z5_OSTTA Length = 859 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 220/674 (32%), Positives = 344/674 (51%), Gaps = 49/674 (7%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LND QR AV AP VLAG GSGKT VL+ R+A L+ E P I+ +TFTNKAA Sbjct: 72 GLNDAQRAAVLAPVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREILCITFTNKAAK 131 Query: 69 EMRHRIGQLMGT-SQGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRLLK 124 E+R R+ +G + + GTFH +A R+LR H +F I D++D ++++ Sbjct: 132 ELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIPGIGRTGEFTIYDADDSKQIVQ 191 Query: 125 RLI-KAMNLDEKQWPPRQAMWYINSQKD------------EGLRPHHIQSYGNPV-EQTW 170 ++ +K P +I++ K + P+ +Q + Sbjct: 192 SVLVNKFGESKKTAQPGPMRNWISTAKSCVKHSVGLRGSQMLRALEDAKKPIPPMSQQRF 251 Query: 171 QKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQY 230 ++Y Y++ +A DF +LL + P + +Y R++ +LVDEFQDT+ QY Sbjct: 252 VELYDEYEDGLRQANAFDFDDLLSATVAMLEMCPDVRAYYERRWSQVLVDEFQDTSTTQY 311 Query: 231 AWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRSTSNI 289 IR L+ G V +VGD DQ+IYGWRGA+V NI+ +F DF +T L NYRSTS I Sbjct: 312 ELIRKLSQPQGSVFVVGDADQAIYGWRGAEVANIRTQFDQDFKEVQTHMLTTNYRSTSTI 371 Query: 290 LSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALA 348 + AA A+I+ ++ L G +++ A ++ +EA F+ + D+ + Sbjct: 372 VEAAQAVIKESSFPSPLDLVAHTPGGRDVAIVEANDDREEAEFIALEARKLVQDSDLRYS 431 Query: 349 ECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFE 408 + A+LYR+N+Q+RVLEEA ++A +P+ + G F+ R+EIKD ++YLR+++N +D + Sbjct: 432 DVAVLYRTNSQARVLEEAFIRAGVPHTVVGDTSFYSRKEIKDMIAYLRIVSNSSDTVSLN 491 Query: 409 RVVNTPTRGIGDRTLDVVRQTSRDRQL------TLWQACRE---------------LLQE 447 R++NTPTRGIG+ T++ + + ++ A E Sbjct: 492 RIINTPTRGIGNSTIEKLNAWLKTLPKKDGLSPSIGDALLRGAWKTNPGEQSELLPSADE 551 Query: 448 KALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIE 507 L RA +A+ F+EL+ A Q + + VIK +G TM + G R Sbjct: 552 MGLTARARTAVLNFVELMRACQQTAMNATPGELLEDVIKRTGYETMVL--DADDGVDRWA 609 Query: 508 NLEELVTATRQF-----SYNEEDEDLMPLQAFLSHAALEAGEGQAD-TWQDAVQLMTLHS 561 ++EL+ ++ ++ L L AFL +L D T D +LMT+H+ Sbjct: 610 FVQELINLAKEPPRDVDETIQDRVGLEALGAFLEGVSLLTSAETDDVTGGDKAKLMTMHA 669 Query: 562 AKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLY 621 +KGLEF VFI G+E+G+ P + D +EE RL YVG+TRA +KL L +A RR + Sbjct: 670 SKGLEFDTVFIAGVEDGLIPFIRNGDSDDDQDEEVRLFYVGITRAKRKLMLCHARERRRF 729 Query: 622 GKEVYHRPSRFIGE 635 G+ F+ + Sbjct: 730 GQSPQAARRSFLLD 743 >UniRef50_C8WI10 UvrD/REP helicase n=3 Tax=Bacteria RepID=C8WI10_EGGLE Length = 753 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 229/725 (31%), Positives = 360/725 (49%), Gaps = 30/725 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN QREAV A + V+AGAG+GKT L HR A+L++ P +++ TFTNKAA Sbjct: 42 RLNAAQREAVTATEGYVRVIAGAGTGKTLALAHRFAYLVNELGIMPGNVLCATFTNKAAG 101 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EMR RI +L G + G ++ TFHG +L+ P+ F +LD+ D +L+ + + Sbjct: 102 EMRRRIRRLTGDNDTG-YINTFHGFCVSVLQEDGHALQYPKSFLVLDNADIDAMLQVIYE 160 Query: 129 AMNLDEKQWPPRQAMWYIN--SQKDE--------GLRPHHIQSYGNPVEQTWQKVYQAYQ 178 L + +A I K+ + ++ ++ Y Sbjct: 161 ERGLTLRDMTFSKARDMIEIMKLKERPGYYRDMLAMPLEGLRQKYLDATDARDIIFYGYL 220 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + +D+ +L++ L+ P I +++R I+VDEFQD + +Q+ + +LAG Sbjct: 221 YQEKKCFGLDYNDLIVFVLYLFEQNPDIRLKWQKRLEYIMVDEFQDIDGLQHELMEVLAG 280 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + +VGD DQ+IY WRGA V + F FPG T+ + +NYRS +++ AN+LIE Sbjct: 281 YHKNLFVVGDPDQTIYTWRGADVRYLLDFDKRFPGTRTVMMLENYRSAPRVVAVANSLIE 340 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNA 358 N R+ K+L + P A + EA ++ G A + A+LYR++ Sbjct: 341 KNRERVPKRLAAMRSVHGPTVWRHAKSPDGEAAWIAQGALALHGEGVAYRDMAVLYRAHY 400 Query: 359 QSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGI 418 SR +EEALL+A +P+ +Y G+ FF R+EIKDALSYLRL+A DD F RV N P R + Sbjct: 401 ASRPVEEALLRAEVPHAVYSGVPFFGRREIKDALSYLRLVA-YQDDLDFARVANAPKRNL 459 Query: 419 GDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLH 478 G R + +R+ + + +L++A + + + ++ ++L+D P+ Sbjct: 460 GARRMAFLREKADELGCSLFEALERFVDDDLFK---RTKARQLLQLVDRFRSSYEGRPVS 516 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHA 538 V+ +SG E ++ R++NL EL + +F +E + L+ +L+H Sbjct: 517 EVLAAVLSESGYERALRTEGSQE---RLDNLAELKQSVYEFETTCGEE--VTLEHYLAHT 571 Query: 539 ALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 AL D QD V+LMT+H+AKGLEF VF+ M EG+ PS D +EEERRL Sbjct: 572 ALLTNADAMDDAQDKVRLMTVHAAKGLEFAHVFLCSMTEGVLPS-RKTDTPQGMEEERRL 630 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSH-- 656 A+V +TRA L LT AE R G PSRF+ ++ +E A + Sbjct: 631 AFVAMTRARDGLYLTEAEGRGHEG--APRYPSRFLLDIDPAALEFSNKPAERELDDARAA 688 Query: 657 ---QRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAA 713 + D+ + +G RV HA FG G ++ ++ +VAF ++ Sbjct: 689 YALADRWIADLVRDARFAVGDRVTHAAFGSGRVLAVDSQ--KRAYEVAFDDLDTPRTISF 746 Query: 714 YARLE 718 A+LE Sbjct: 747 KAKLE 751 >UniRef50_Q0F272 ATP-dependent DNA helicase Rep n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F272_9PROT Length = 652 Score = 686 bits (1771), Expect = 0.0, Method: Composition-based stats. Identities = 243/655 (37%), Positives = 353/655 (53%), Gaps = 24/655 (3%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LN+ Q +AV LLVLAGAGSGKTRV+ RIA L+ + ++I AVTFTNKAA Sbjct: 7 SGLNEAQYQAVYYRNGPLLVLAGAGSGKTRVITERIAALV-ERDVPDHAITAVTFTNKAA 65 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EMR R+ Q +G G+ + TFH L ++R H + + +Q +++ ++ Sbjct: 66 KEMRERLQQRLGDKANGLRICTFHALGLAMVREHADLVGRKANVSVFAGAEQKTVMRSVL 125 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 M L + + ++S K L E + + Y ++ V Sbjct: 126 SEMKLAADADQVDRMLSRVSSLKSGLL---------EVHENQLAAIRETYDALLEKMNAV 176 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL+ L ++ +RER LVDE+QD++ IQY +RLL D G + +VG Sbjct: 177 DFDDLLVLPLRLLSEHDNVRAIWRERARYFLVDEYQDSSRIQYQLVRLLVPDDGNLTVVG 236 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIYGWRGA+V+N+ + D+ +RLE+NYRST +IL A+N+LI NN+ RLGK Sbjct: 237 DDDQSIYGWRGAEVKNLFQLERDYTNLHVVRLEENYRSTGSILQASNSLIANNSERLGKT 296 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLEEA 366 L + G+PI ++ + N +EAR + IK+ +GG +LYR++ QSR +E A Sbjct: 297 LRSTLGQGKPIRVWGSPNPEEEARRLAGDIKSHHARSGGQWDAYCVLYRASFQSRSIELA 356 Query: 367 LLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVV 426 L +A +PY + GGM FF+R EI+D L+YLRLIAN +DD AF R + P RGIG + L + Sbjct: 357 LREAGIPYHVSGGMSFFDRAEIQDILAYLRLIANFSDDLAFMRAIARPRRGIGSKALGDL 416 Query: 427 RQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIK 486 + +L +AC + + L + A AL+ F ++I L + D V+ Sbjct: 417 GFFAMAEDCSLLEACLK----EELDHKRAEALREFGDMIVGLEHQFRHGEPDDAFDAVLD 472 Query: 487 DSGLRTMYEQEKGEK--GQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 + L E ++ + R+ N+ EL + D L FL H L A E Sbjct: 473 LTRLEAAIRAEADDQEVAERRMSNVLELRRWWVIHTERGGD-----LTEFLQHIFLLA-E 526 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 Q D V+LMT+H+AKGLEF QV+++GMEEG+FP + +LDE R+EEERRL YV +T Sbjct: 527 KQDDDPSGQVRLMTVHAAKGLEFDQVYVIGMEEGIFPHRNALDE-NRMEEERRLMYVAMT 585 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRM 659 RA LTL+Y+ TRR +G PS F+ E + + V A + Sbjct: 586 RARFLLTLSYSLTRRRFGTIEKCAPSPFLKEPDQSVLRWVDKDADSEEAHEEAQD 640 >UniRef50_A4IYZ2 ATP-dependent DNA helicase/UvrD/REP helicase n=21 Tax=Francisella RepID=A4IYZ2_FRATW Length = 671 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 229/674 (33%), Positives = 349/674 (51%), Gaps = 16/674 (2%) Query: 6 LLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNK 65 +LD+LN +Q++AV + LLVLAGAGSGKT V++ +I++L+ SI+AVTFTNK Sbjct: 1 MLDNLNQQQQQAVKYIATPLLVLAGAGSGKTSVIIEKISYLIEQLLYPAKSILAVTFTNK 60 Query: 66 AAAEMRHRIGQLMGTSQG-GMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 AA EM+ R+ + + G+ + TFH L +L+ H + ++F + DS D L L+ Sbjct: 61 AAKEMQERVKSRLDKEKSKGLMISTFHSLGLSILKKHFNELGYKKNFTLFDSHDSLALIY 120 Query: 125 RL-IKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDR 183 + L ++ I+ K L P ++ + +E+ +YQ YQ+ Sbjct: 121 DIAYDEYQLPKQNASF--IQAKISFWKSALLTPDQVKP-KDELEEQAAFIYQEYQKYLKS 177 Query: 184 AGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKV 243 DF +L+ + +L+ N +I + + ++F IL+DE+QDTN QY ++ L K Sbjct: 178 YNSFDFDDLIFQPIQLFRNHSNIQKLWADKFRYILIDEYQDTNESQYQLLKYLTLGKNKF 237 Query: 244 MIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGR 303 +VGDDDQSIY WRG++ EN++ DF + I+LEQNYRST IL+ AN LIENN+ Sbjct: 238 TVVGDDDQSIYAWRGSRPENLRHLQEDFADLKVIKLEQNYRSTGRILNVANKLIENNSHI 297 Query: 304 LGKKLWTDGADGEPISLYCAFNELDEARFVVNRI-KTWQDNGGALAECAILYRSNAQSRV 362 KKLW++ GE I + N+ DEA+F+ + I ++ A+L RSN Q+ + Sbjct: 298 FDKKLWSNKDYGEQIKVISLINDEDEAQFIASDIFFDRVKTKSKNSDYAVLIRSNYQAYL 357 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LE + +PY I GG FF + EIKD +SYLRLI N +DD AF RV+NTP R +G T Sbjct: 358 LERYMQMHKIPYTISGGSSFFSKAEIKDIISYLRLIVNPDDDRAFLRVINTPKREVGSAT 417 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM----PLH 478 + + + + + + L + L L F +LI Q+ L Sbjct: 418 VHKLGEYASQHHCSFFHTLYSL-ENFELRDFTKRNLISFKDLILNTQQQINTSISVQELK 476 Query: 479 VQTDRVIKDSGLRTMYEQEKGEKGQT--RIENLEELVTATRQFSYNEEDEDLMPLQAFLS 536 + I + R + Q R N+ E+ +E L L L+ Sbjct: 477 NIINSFIDNISYRQWLIDSSSSEKQAEFRYANIIEVTKWIVNQLEDESYNGLESLATVLN 536 Query: 537 HAALEA--GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L D + VQ++T+H++KGLEF +V+I+GMEEG+ P Q S+++ +E+ Sbjct: 537 KMLLIDILDRDNEDKNDNQVQIITMHASKGLEFKKVYIMGMEEGILPHQQSIED-DSIED 595 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPV 654 ERRLAYV +TRA + LT+T + R+ +G++ PSRFI ELPE + V + Sbjct: 596 ERRLAYVAITRARENLTITMTKHRKKFGEKQVSVPSRFIDELPETDLYWVGTEKECAETR 655 Query: 655 SHQRMGTPMVENDS 668 D Sbjct: 656 KQNSKQNISALKDM 669 >UniRef50_A5HZM6 ATP-dependent DNA helicase n=4 Tax=Clostridiales RepID=A5HZM6_CLOBH Length = 884 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 224/716 (31%), Positives = 378/716 (52%), Gaps = 29/716 (4%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 ++ LND QREAV + V+AGAGSGKT+ L R +L+ S +I+ TFTN Sbjct: 4 DVISGLNDAQREAVTTTEGYIRVIAGAGSGKTKALTSRYIYLVHELGISTANILCATFTN 63 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA EM+ RI ++G + G+ +GTFHG RLL+ N P +F ++D+ED +L+ Sbjct: 64 KAAREMKKRIRTMIGDNDTGL-IGTFHGFCRRLLKEDIYTINYPDNFIVMDNEDMDLVLR 122 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGL---------RPHHIQSYGNPVEQTWQKVYQ 175 + + N+ KQ+ +A I+ +K++ + ++ + +++ Sbjct: 123 IVYEDANISSKQFTFSKAKDMISKRKNKDFKYISYIIETDNNELKKKFLTSKNVEDRIFY 182 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y + +DF +L++ + P + + ++++ I+VDEFQD N QY + + Sbjct: 183 GYLYQQKKNYNLDFNDLIIFTLHILETFPKVRKKWQQKLEYIMVDEFQDVNIKQYRLVSI 242 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L+ + +VGD DQ++Y WRGA V I F +F G +TI + QNYRS+SNI+ A+N+ Sbjct: 243 LSEYHKNLFVVGDPDQTVYSWRGANVNLILNFDKEFKGTKTIMMNQNYRSSSNIIKASNS 302 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYR 355 LI N R+ K+L P+ + N EA +++N+I+ G + AILYR Sbjct: 303 LISKNKQRIDKELIPIKHGNIPVVYKHSENIYKEANWIINQIEQIIKGGNSYKNIAILYR 362 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 ++ SR +EEALL+ +PY +Y G+ F++R+EIKD LSYLR++ DD +F R++N P Sbjct: 363 AHYVSRSIEEALLKNKIPYTLYSGVEFYQRKEIKDILSYLRMVV-FEDDLSFIRIINEPK 421 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADM 475 R G + ++++R+ + D +L+ + + L++K + A S +F++LI+ + +M Sbjct: 422 RNFGKKRMEIIRKYAEDNNCSLYSSLKINLEDKLI---AKSKADKFVDLIERYKKIYKEM 478 Query: 476 PLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFL 535 + ++ +SG M + ++ R+ENL EL + + + ++ L+ +L Sbjct: 479 RITDLLMELLNNSGYEAMLRESGEDE---RLENLAELKNSISDYENSAGEDT--TLEDYL 533 Query: 536 SHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 +L +D + +MTLH+AKGLEFP VFI EG+FPS + + ++EEE Sbjct: 534 QEISLFTNSD-LKENKDTINMMTLHTAKGLEFPYVFICEFNEGIFPSART-NTKEKMEEE 591 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVS 655 RRLAYVG TRA L L+ AE G Y PSRFI + + + + Sbjct: 592 RRLAYVGYTRAKNALFLSDAEGVNYDG--SYRFPSRFIFNTGKTYLNYLVELKESLIDDA 649 Query: 656 HQR----MGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGI 707 ++ + N+ +K+G+R+ H G G I+ ++ ++S + F Sbjct: 650 NEFISDSENSMNKSNNIKFKIGERIIHKLLGLGVIIGID--NDNSSYMIKFDNAET 703 >UniRef50_A9F541 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F541_SORC5 Length = 685 Score = 682 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 217/643 (33%), Positives = 314/643 (48%), Gaps = 33/643 (5%) Query: 25 LLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGG 84 +LVLAGAGSGKTRV+ RIA L+ S++A+TFTNKAAAEM R+G+L+G+ Sbjct: 1 MLVLAGAGSGKTRVVTTRIARLLD-RGIPARSMLAMTFTNKAAAEMHERVGKLVGSKVAR 59 Query: 85 -MWVGTFHGLAHRLLRAHHMDANLPQD-FQILDSEDQLRLLKRLIKAMNLDEKQWPPRQA 142 + V TFH +L A L F I D D L +++ +++ + K + Sbjct: 60 ELKVCTFHRFGLDVLGAETRALGLRGGSFAIFDQSDALGVIREILRELRAG-KSYDVSAI 118 Query: 143 MWYINSQKDEGLRPHHIQSYG------NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRA 196 + I++ K+ L + ++ VY Y A DF +L+ Sbjct: 119 LSRISNAKNAFLDAESWAEAQRQGKGIDEYDEISMLVYPRYMAALRSFQAFDFDDLICEV 178 Query: 197 HELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGW 256 LW + +L+ +R R+ ++VDE+QDTN Q +RLL G+ V++VGDDDQSIY W Sbjct: 179 VRLWQTRADVLERWRMRYRFVIVDEYQDTNRAQLELLRLLCGEHRNVVVVGDDDQSIYAW 238 Query: 257 RGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN-NGRLGKKLWTDGADG 315 RGA V NI F F GA+ ++LE NYRS IL ANA++ + R K L +G Sbjct: 239 RGADVRNILDFEEHFSGAKVVKLEHNYRSRKPILDVANAVLAKSGARRHKKSLIATRVEG 298 Query: 316 EPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQSRVLEEALLQASMPY 374 + + + EA FV + + + A+LYRSN Q+ +E AL + +P Sbjct: 299 DKVRSIICVDPDVEASFVATEAQRLLEREAARPKDIAVLYRSNLQAAAIESALKERQIPI 358 Query: 375 RIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQ 434 R+ GG +FFER+E+KD ++YLR+ N D+ R++N P RGIGD + + + Sbjct: 359 RMIGGQQFFERKEVKDLIAYLRVALNPGDEMCLRRILNYPARGIGDAAVAKLGAYATAHD 418 Query: 435 LTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA-DMPLHVQTDRVIKDSGLRTM 493 +LW A L A ++ + +I+A P ++ D+G + Sbjct: 419 ASLWTAVSRPHAVHELTSAAIEGCRQLLRIIEATRARFERGEPSAEVARALLADAGFKED 478 Query: 494 YEQEKG--EKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQ 551 R N+E L+ + D FL AL + + Sbjct: 479 IMAGSSTANAAARRWGNIEGLLNVFARRDEK-GKGDRASFAEFLRLLALRQDS-EEEEAT 536 Query: 552 DAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDE----------------GGRLEEE 595 D V L T+H AKGLEFP VF++G+EEG+ P Q SLDE G +EEE Sbjct: 537 DRVTLTTMHGAKGLEFPYVFVIGLEEGLMPHQRSLDERATDAAPSGAEGGDTGGHSIEEE 596 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 RRL YV VTRA +L LT A+ R GK V PSRF+ E+P Sbjct: 597 RRLFYVAVTRARDRLYLTRAKHRGSRGKMVPRTPSRFMLEIPP 639 >UniRef50_Q0SMP9 Rep helicase, single-stranded DNA-dependent ATPase n=19 Tax=Borrelia burgdorferi group RepID=Q0SMP9_BORAP Length = 659 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 209/670 (31%), Positives = 336/670 (50%), Gaps = 26/670 (3%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + SLN Q EAV LL++AGAGSGKTRV+ HRIA+L+ + + I+A+ Sbjct: 1 MPDDFFKKSLNQFQYEAVTTIEGALLIIAGAGSGKTRVVTHRIAYLLL-KGIAQKEILAL 59 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EM+ RI +++ + + V TFH L+ ++ ++F I D D++ Sbjct: 60 TFTNKAANEMKDRIKKILKSPLSNLMVSTFHAFGLFFLKENYKLLGYRKNFSIYDDNDRI 119 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA 180 LLK ++ L K+ I+ K+ L + ++ +++ Y+E Sbjct: 120 SLLKEILLDEGLLNKKVSLNSLSNVISLFKNGILTLNDLKEED-------INIFRLYEER 172 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 DF +L+L+ EL N I Y +R+ +L+DEFQDT+ IQY +IRLL + Sbjct: 173 LRLYNSFDFDDLILKPKELLSNNSDIRNKYSKRYKYVLIDEFQDTSLIQYNFIRLLI-NH 231 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 + VGDDDQSIY WRGA N+ +F D+ A+ I+LEQNYRS NIL AN++I NN Sbjct: 232 SNLCCVGDDDQSIYSWRGASYNNMLQFEKDY-NAKEIKLEQNYRSAKNILDVANSVILNN 290 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRSNAQ 359 R K LW+ + I + +E+ E+ FV ++I G + +L R+NA Sbjct: 291 KNRKEKTLWSSKMCSKVIDFFIFEDEIQESEFVASQIIELSKLEGFQSKKIGVLMRTNAL 350 Query: 360 SRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIG 419 + +E + + Y++ GG FF+R+EIKD +SYL +I N D R++N P RGIG Sbjct: 351 FKNVEMIFKRQGIKYKVSGGTSFFQRKEIKDIISYLNVIINPKSDYDLLRIINIPRRGIG 410 Query: 420 DRTLDVVRQTSRDRQLTLWQACRELLQ--------EKALAGRAASALQRFMELIDALAQE 471 L +R + + ++ A ++ +K L + +++ F+ I+ + Sbjct: 411 KEYLKKIRDMADKKGCCIYDALCDIAFSFASISSYDKVLNKQVIESIEDFVSFIEEYQYK 470 Query: 472 --TADMPLHVQTDRVIKDSGLRTMYEQEKG---EKGQTRIENLEELVTATRQFSYNEEDE 526 +I+ E + + + +N+E ++ + + + Sbjct: 471 FSIKKNTYSNIIKEMIESIEYWGFLVSENPNSIKVAEYKYQNIEGFLSIIKNWESKQ-LG 529 Query: 527 DLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSL 586 +L L +FL++ L++ E ++ + LMT+HSAKGLEF VF + +E+ + P + Sbjct: 530 ELRDLSSFLNYIVLQSNEVSEESENININLMTVHSAKGLEFDYVFFIAVEDNIIPHHRII 589 Query: 587 -DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 D LEEERR+ YV +TRA L +T A R+ + PSRFI E+P+E + Sbjct: 590 EDSELDLEEERRVFYVALTRAKDSLVITMANKRKKDRQIFEQLPSRFISEIPKEFLNFNY 649 Query: 646 LRATVSRPVS 655 + Sbjct: 650 YADFIENKAR 659 >UniRef50_Q6AJ72 Probable ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Desulfotalea psychrophila RepID=Q6AJ72_DESPS Length = 733 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 231/741 (31%), Positives = 350/741 (47%), Gaps = 52/741 (7%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L LN Q AV +LV+AGAGSGKTR L++R+A L+ + +P SI+ +TFT KA Sbjct: 18 LSGLNPAQHLAVTTTEGPVLVIAGAGSGKTRTLIYRVAHLLD-KGVAPESILLLTFTRKA 76 Query: 67 AAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRL 126 + EM R G+L+G + + GTFHG+A+ LLR + + F I+D D ++ L Sbjct: 77 SQEMVWRAGELLGENCSRVMGGTFHGVANMLLRQYGSHMGWGKGFTIIDRADAEGII-NL 135 Query: 127 IK---AMNLDEKQWPPRQAMWYINSQKDEGLRP------HHIQSYGNPVEQTWQKVYQAY 177 +K M +K++P ++ + I S P + ++ + Y Sbjct: 136 LKSSLEMGKGDKRFPGKRIIINIISGSINKSTPMEELIHDQYGHLADHCADIL-RLGRHY 194 Query: 178 QEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLA 237 L+D+ +LL+ L P + RF ++VDE+QDTN IQ IRLLA Sbjct: 195 HTFKRDNVLMDYDDLLVNWKLLLQESPEVRSMMSHRFRYVMVDEYQDTNLIQADIIRLLA 254 Query: 238 GDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALI 297 + VM+VGDD QSIY +RGA NI RF +FPGA+ I+LE+NYRST ILS N LI Sbjct: 255 SEHSNVMVVGDDSQSIYSFRGADFYNIMRFPKEFPGAKLIKLEENYRSTQPILSLTNDLI 314 Query: 298 ENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSN 357 N + + K L ++ + +Y A +E EA F++ R++ +G +E A+L+RS Sbjct: 315 ANASEKYTKSLHSNIKGEQRPIVYGARDEQAEATFILARVQQHIRDGIDPSEIAVLFRSG 374 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 S LE L A + + GG++ E +KD LS+LRL+ N D+ ++ RV+ R Sbjct: 375 FHSYKLEIGLGAAGIEFEKRGGLKLTEAAHMKDVLSFLRLLVNPRDNLSWNRVLLQLDR- 433 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPL 477 IG +T + T + + L A + + + +L L + Sbjct: 434 IGPKTAQKITTTI----VPTFDPFLSLKNYPA-SKASVDIIAGLADLFRELR--VTERTP 486 Query: 478 HVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSH 537 + V+ ++E+ + R ++LE + LQ F+ Sbjct: 487 AALYELVLN--YYTPLFERLYSDDYPKREKDLEHFKGVIAGYDD---------LQKFIDD 535 Query: 538 AALEAGEGQADTWQDA--VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEE 595 L+ AD D + L T+HS+KGLEF VF++G+ EG FP ++ G + EEE Sbjct: 536 TTLDPPAPTADKTPDGKRMVLSTIHSSKGLEFDAVFVMGLAEGRFPHANTVGFGPQWEEE 595 Query: 596 RRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR-PSRFIGELPEECVEEVRLRATVSRPV 654 RRL YV TRA + L LTY ++ S ++ EL + E V +T S Sbjct: 596 RRLLYVAATRARKHLYLTYPRQMMTPDRQFKRVGMSPYLVELKDMLYERVEGSSTSSLSR 655 Query: 655 SHQRMGTPMVEN---------------DSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQ 699 + + + LG RV+H FGEGT+ M G ++ Sbjct: 656 PSRFAESNSPRPVGIPAGRRSRPAGLKRADLSLGTRVKHPFFGEGTVKKMPG---GPAIE 712 Query: 700 VAFQGQGIKWLVAAYARLESV 720 V F+ G K L YA+LE V Sbjct: 713 VEFEQYGTKALHLDYAKLELV 733 >UniRef50_A0LFK0 ATP-dependent DNA helicase, Rep family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LFK0_SYNFM Length = 620 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 221/639 (34%), Positives = 344/639 (53%), Gaps = 34/639 (5%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 + SL+ Q EAV+ + +V AGAGSGKTR L ++IA+L++ + P I+A+TFTNKA Sbjct: 3 MQSLSPVQMEAVSHVETPAIVTAGAGSGKTRTLTNKIAYLVNNLHYDPERILAITFTNKA 62 Query: 67 AAEMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKR 125 A EM+ R+ ++ G S G WV TFH ++L+ H + I D+ Q LK+ Sbjct: 63 ADEMKSRLEKITGRSAGDFPWVRTFHSACFKILKVHCELLGYRKPLLIHDASQQKAHLKK 122 Query: 126 LIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAG 185 ++ +NLD A I+ K+ P + V + ++ Y+ Y E ++ Sbjct: 123 VLAELNLDRHYLFA--AASLISKAKNSA-DPVLYLASNGRVPRR-KEAYRIYNEMLAQSN 178 Query: 186 LVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMI 245 VDF ++LL +L P I + YR RF ILVDEFQD+N IQ I LL D + + Sbjct: 179 SVDFDDILLLTRDLLQKYPEIRKAYRNRFDYILVDEFQDSNEIQNQIIDLLLKDGR-LTV 237 Query: 246 VGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLG 305 VGDD QSIY +RGA + F + A RLE+N+RST I++A++ LI +N R+ Sbjct: 238 VGDDYQSIYQFRGANPFHFINFPQKYAKARVFRLEENFRSTRQIVTASDRLIAHNLQRIE 297 Query: 306 KKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRSNAQSRVLE 364 K+ ++ DG+P+++ +NE EA +V +R + D E AILYR+ S E Sbjct: 298 KQCFSRR-DGQPVTVETFYNEQMEAEWVADRCRELLNDENIPYREIAILYRTKFTSLPFE 356 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 AL A +PY + G FF+R+E++D +YL N +DD +FER+VN P RGIG L Sbjct: 357 RALRSAGVPYTMVGAQGFFQRREVQDINAYLICAVNPSDDISFERIVNVPRRGIGPGALK 416 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 + ++R ++L A R+ + + + +AA+ L + + L++++A+E D RV Sbjct: 417 KIF-GCKERNMSLRDAARKAIDGRLIPKKAAAELDKLLSLLESIAEEKPDAA----MHRV 471 Query: 485 IKDSGLRTMY--EQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 +K++ + G+ +TR+EN++ ++ + +L AAL Sbjct: 472 MKETDYFAHLSTLSDDGDDLETRLENIKSMIYDAA---------GKASIPEYLEDAALIR 522 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL------EEER 596 + + V+L T+H+AKGLEF VF+V +EEG+ P + S++ + EEER Sbjct: 523 DDQDETDNGNGVRLSTIHAAKGLEFKAVFVVAVEEGILPHRKSIETESEIELERGMEEER 582 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGE 635 RL YV +TRA + L+L+ A TRR RPS F+ E Sbjct: 583 RLMYVAMTRASELLSLSAAATRRG----ELARPSPFLAE 617 >UniRef50_A1W088 ATP-dependent DNA helicase, UvrD/REP family n=30 Tax=Epsilonproteobacteria RepID=A1W088_CAMJJ Length = 691 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 232/722 (32%), Positives = 369/722 (51%), Gaps = 49/722 (6%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 L + LND Q++AV+ +L+LAGAGSGKT+ + R+A+L+ ++ + +TFTN Sbjct: 2 NLFEDLNDSQKQAVSHIDGAMLILAGAGSGKTKTITTRLAYLIGEVGIPSHNTLTLTFTN 61 Query: 65 KAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLK 124 KAA MRHR + + + TFH L+ H F ++D++D +++K Sbjct: 62 KAANVMRHRALNFLQGN-HNPLLCTFHKFGLLFLKLHFERLERKNSFIVIDTDDTKKIIK 120 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ----------TWQKVY 174 LI N D + YI+ K+EG R ++ N +++ + Y Sbjct: 121 DLIHDKNKDN----VYDIIQYISYCKNEGKRVSNVFEDLNLLKEHNFEKYQNEYKFANYY 176 Query: 175 QAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIR 234 +AY+E + VDF +LLL ++ + N + + + I VDE+QDTN +QY ++ Sbjct: 177 RAYEEYLLKQNFVDFDDLLLLSNLILENDINFAKEQSLLYNYITVDEYQDTNTLQYKILK 236 Query: 235 LLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAAN 294 L + +VGDDDQSIY WRGA++ENI F NDF + ++LEQNYRS IL AAN Sbjct: 237 NLCCMHENITVVGDDDQSIYSWRGAKIENILNFQNDFKNVKLVKLEQNYRSVGTILQAAN 296 Query: 295 ALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILY 354 LI +N RLGK L GE I + NE DE ++ +K ++G E AIL+ Sbjct: 297 NLISHNEQRLGKTLICTKDTGENIKILKNENEKDEGLYIAQEVKKLLNSGVEAKEIAILF 356 Query: 355 RSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTP 414 R NA SR +EEA ++ + Y++ GMRF+ER EIKD +SYLRLI N +DD +F+R++N P Sbjct: 357 RVNALSRAIEEAFMKKQISYKLLSGMRFYERLEIKDLISYLRLILNPSDDLSFKRIINRP 416 Query: 415 TRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL--AGRAASALQRFMELIDALAQET 472 R IG++ L + + ++ RQ++L+ A E + +A + F++ I L Sbjct: 417 KRSIGEKALKNLEEYAKKRQISLFDALCESDGGVGILTTKKAQNEANIFIQNIHTLKSYD 476 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + + + K + + G RI NL+E R+ + + L+ Sbjct: 477 NAKKVFDNIEELFKIKDYFSE-----QDDGDERIRNLDEFYANLREKLKEDPE---ASLE 528 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 LS +L + + D + V LM++H++KGLEF VFI+G +EG FP + Sbjct: 529 DLLSEISLLSDQDNLDE--ECVCLMSIHASKGLEFDYVFIIGFDEGFFPLNSEENLEEER 586 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSR 652 LAYV +TRA + LT++ A +R +G PSRF+ E + + E + + Sbjct: 587 R----LAYVAITRAKKLLTISVANSRFYHGSRANINPSRFLEE--SKLINEKSKNQNIQK 640 Query: 653 PVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVA 712 + + G V+H FG G +V + SG+ +L + F G ++ ++A Sbjct: 641 ---------------TSFCKGDLVKHKIFGIGRVVEVNKSGKEEKLNINFGGI-MRVIMA 684 Query: 713 AY 714 ++ Sbjct: 685 SF 686 >UniRef50_Q89A21 ATP-dependent DNA helicase rep n=2 Tax=Buchnera aphidicola RepID=REP_BUCBP Length = 670 Score = 676 bits (1744), Expect = 0.0, Method: Composition-based stats. Identities = 220/647 (34%), Positives = 352/647 (54%), Gaps = 17/647 (2%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 N+ Q++A++ L+LAGAGSGKTRV++++I L+ + + P I A+TFTNKAA E Sbjct: 3 FNEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACE 62 Query: 70 MRHRIGQLMGTSQGGMW-VGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 M+ RI ++ + + + TFH L ++++ N+ +F I D +DQ+ +L+ ++ Sbjct: 63 MKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVS 122 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQ-TWQKVYQAYQEACDRAGLV 187 E + RQ I++ K++ L P+ + N + + + Y+ Y + ++ Sbjct: 123 K----EDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNIL 178 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +L+ L + + + ++ +LVDE+QDTN IQY I+LL+ +VG Sbjct: 179 DFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVG 238 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DDDQSIY WRGA + N + +D+P TI ++ NYRS+ IL ANALI NN KK Sbjct: 239 DDDQSIYSWRGANIHNFESLKHDYPNLRTIIMQHNYRSSGRILKVANALISNNLHFFNKK 298 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGA--LAECAILYRSNAQSRVLEE 365 L+++ G + + A NE DEAR ++ + + + AILYRSN Q ++ E+ Sbjct: 299 LFSNLDYGSIVEIISAKNEEDEARVILQTLM-LHKSNYNAQYKDYAILYRSNYQVKIFEK 357 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 L++ +PY+I + FF R EIKD ++YLRLI N +D+AAF RVVN P RGIG TL Sbjct: 358 FLIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQK 417 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 +++ S+ R + + A ++ E L +LQ F+ LI ++ + P+ ++++ Sbjct: 418 LKEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPI-EVLEKLV 476 Query: 486 KDSGLRTMYEQE--KGEKGQTRIEN----LEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 + + I+N L ++ + N + + L +S Sbjct: 477 ATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFI 536 Query: 540 LEAGEGQA-DTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRL 598 L+ + D VQLMTLH++KGLEF VFIVG+EEG+ P + ++EERRL Sbjct: 537 LQNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTTMENNIDEERRL 596 Query: 599 AYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVR 645 AYVG+TRA +KL L+YA R YG + +PSRF+ ELP+ + + Sbjct: 597 AYVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLRELPQSDILWQK 643 >UniRef50_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023F08A Length = 1060 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 201/669 (30%), Positives = 326/669 (48%), Gaps = 52/669 (7%) Query: 4 SYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFT 63 +L SLN+ QR AV + S + +LAG GSGKT L R+ WL+ P ++ TFT Sbjct: 7 DAILQSLNEAQRRAVTSTASTVAILAGPGSGKTHTLTSRVVWLIQRVGYRPSDVIVATFT 66 Query: 64 NKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 KAA EM+ RIG+ +G + +GTFH +A R L + L F I D D + Sbjct: 67 VKAAREMKERIGKTLGEECEKKIVLGTFHSIARRYLSIYGNRIGLDSKFGIADDGDSRAI 126 Query: 123 LKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQS----YGNPVEQTWQKVYQAYQ 178 ++R+ K + L+ P+QA +I+ +K +G P + G + Y+ YQ Sbjct: 127 IQRICKRLKLN---IEPQQAKSWISKEKAKG--PDAMAPPPTQKGRKENPELRTCYEEYQ 181 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 R+ L+D+ +LL++ EL + P + + + +L+DE+QDTN IQY ++L A Sbjct: 182 AQLTRSNLLDYDDLLVKCVELLRDHPACVSNVQT----VLIDEYQDTNGIQYELMKLFAQ 237 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 ++ IVGD DQSIYGWR A+V+N+ R L ++P + I LE+NYRS+ +IL + +I+ Sbjct: 238 AKQRITIVGDPDQSIYGWRSAEVKNLFRLLREYPNTDEISLEENYRSSQSILDVSLTVIQ 297 Query: 299 NNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ---DNGGALAECAILYR 355 + R K L G L + E ++V+ IK + + AIL R Sbjct: 298 QDTKRYKKVLLPVHTKGARPVLRSLKSSSAEGEWIVSEIKRAVMMFGDMLKFEDVAILLR 357 Query: 356 SNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPT 415 S A SR +E AL +A + YR+ GG +F+ER+EIK + YLR+++ +++ A R++N P Sbjct: 358 SAALSRHIESALGKAGVAYRMIGGHKFYERKEIKVLIDYLRVVSQPDNNDALARIINVPR 417 Query: 416 RGIGDRTLDVVRQTSRDRQLTLWQACRELL-----QEKALAGRAASALQ-RFMELIDALA 469 RGIG+ T+ + + + ++LW + + + + L + I +L Sbjct: 418 RGIGEATVKALIEEAEQSDMSLWTLILKHCRGNRKAKANIRPKMEQKLNTELIRTITSLQ 477 Query: 470 QETADMP------LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNE 523 ++ +++ L ++++ + E+E E+ + R N++E V F + Sbjct: 478 KQASEISQSSPVTLVNLIEQLLTHLDFKKYLEEEYTEEHEQRWANVQEFVNLVSDFMKDF 537 Query: 524 EDEDLMPLQA---------------FLSHAALEAGEGQADTWQDA---VQLMTLHSAKGL 565 D L FL++ AL + + V + T+H+AKGL Sbjct: 538 GAPDEDALPEIDNLDQVKVDDMLGRFLANVALASDAQNKGDTTEQKSLVTISTIHAAKGL 597 Query: 566 EFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEV 625 E+P VF+ + G P S D +EERRL YV +TRA L L+ G Sbjct: 598 EWPVVFVPSVYTGSIPHSRSEDT----DEERRLLYVAMTRAKALLYLSCPL-YGSQGLSS 652 Query: 626 YHRPSRFIG 634 S F+ Sbjct: 653 KVELSPFVA 661 >UniRef50_C6XGC2 DNA helicase II n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGC2_LIBAP Length = 685 Score = 674 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 228/651 (35%), Positives = 356/651 (54%), Gaps = 29/651 (4%) Query: 3 VSYLLDSLNDKQREAVAAPR-SNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVT 61 V L LN +Q AV P + LL+LAGAG+GKT VL+ R+ L+ + P I+A+T Sbjct: 23 VPNYLKGLNAQQTHAVTIPDDTPLLILAGAGTGKTTVLIARMLHLICHKEIPPSKILAMT 82 Query: 62 FTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 FTN+A EM++R+ +G + TFH +LR H LP DF ILDS + Sbjct: 83 FTNQAIQEMKNRLACYLGEKIPRIQ--TFHSFCASILRKHGEVVGLPTDFAILDSAESRT 140 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-VYQAYQEA 180 ++K+L+K + +D+K + P + + I+ ++ G P I + K +Y Y Sbjct: 141 IIKQLLKDLQIDDKDYDPHEVIEKIDYWQNRGWNPKDIPQSSLTEDAEIPKAIYIQYVAY 200 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD- 239 + DF L+++ E+ + PH+L+ Y E+ I+VDE+QD N QY +RLL Sbjct: 201 LQKTKSCDFGGLIIKTIEVL-HHPHVLKKYHEKIPYIMVDEYQDINTPQYLLLRLLCQKE 259 Query: 240 ----TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 ++ VGD++Q IY WRGAQ +I F DF A I+LEQNYRST++IL+ AN Sbjct: 260 DSKQGARICCVGDENQCIYEWRGAQFSHILNFQKDFKDANIIKLEQNYRSTTHILNTANK 319 Query: 296 LIENNNGRLGKKLWTDGA--DGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 LI +N R KKL+T D +S++ + ++ E ++ I Q+ G +L AIL Sbjct: 320 LISHNKQRFDKKLFTQRDCHDDAKVSIHVSQSDNSELSTIIQEIINIQNTGMSLNNIAIL 379 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 R++ Q+R E+A L+ +P+++ GG F++RQEI+DAL+Y RL+ + D F+R++N Sbjct: 380 VRTSWQTRKFEDAFLEQEIPHKVIGG-SFYDRQEIRDALAYFRLVCQEHRDEDFKRIINC 438 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 P RGIG +L ++ + ++L QA +L+ + +LQ F++ I + Sbjct: 439 PKRGIGKESLHKIQYHASQHHISLLQASEKLIDSGQFRPQIRQSLQNFVKDIRRWNNCSK 498 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEK-GEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 M + +++ SG M++ K EK Q R++NL EL++ + L+ Sbjct: 499 KMDPAPIANMILEQSGYMAMWKNNKSSEKSQERLDNLRELLSIIEKHE---------TLE 549 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 F+ A L G + +Q+MTLH+AKGLEF VFI G E+G+ P Q+S++E G + Sbjct: 550 GFVLQAPLRENLGSFIPDSNCIQIMTLHAAKGLEFDTVFISGWEQGLLPHQLSINE-GNV 608 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYG-----KEVYHRPSRFIGELPE 638 E ERRLAYVG+TRA +K L Y RR + + + S+F+ EL + Sbjct: 609 EGERRLAYVGITRAKKKCHLFYTINRRTHDFTRVERYQPSQVSQFLLELYD 659 >UniRef50_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7R1_ACIC5 Length = 943 Score = 673 bits (1737), Expect = 0.0, Method: Composition-based stats. Identities = 203/519 (39%), Positives = 290/519 (55%), Gaps = 10/519 (1%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LLD LN +QR V +L+LAGAGSGKTRV+ HRIA+L+ +P SI+AVTF Sbjct: 1 MQQLLDKLNPQQRAGVENVDGPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTF 60 Query: 63 TNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDA-----NLPQDFQILDS 116 TNKAA EM R+ L+G S + TFH R+LR L + F I D Sbjct: 61 TNKAAKEMAERVDALIGHSTLAKPVLATFHSFCVRMLRRDIEALRIGNEGLTKTFAIYDE 120 Query: 117 EDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ-SYGNPVEQTWQKVYQ 175 DQ L+K++++ M LD+KQ PR + I+ K+ + P +PV + +++ Sbjct: 121 SDQQSLVKQIMRRMGLDDKQLTPRVVLSKISWAKNHMIDPQEYYLQSSDPVAERVAHIFE 180 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 AY++ + +DF +LLL A L + + + Y R+ +L+DE+QDTN QY ++L Sbjct: 181 AYRKDLRKNNALDFDDLLLEAVRLLKSSAEVRERYNRRYQYLLIDEYQDTNRPQYELMKL 240 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 LAG V +VGD+DQSIY WRGA + NI F DFP A+TIRLEQNYRST IL AA A Sbjct: 241 LAGSRHNVCVVGDEDQSIYSWRGADIRNILEFEKDFPNAQTIRLEQNYRSTQVILEAAGA 300 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNGGALAE--CAI 352 ++ N R GK LWT G I Y A + +EA F+ + I+ + G + + A+ Sbjct: 301 VVSRNEQRKGKSLWTSREGGSLIGFYEAPDGENEALFIADSIQKYLRKAGESAEQPRAAV 360 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 LYR+N+QSR++EEAL + + Y + GG F+ER EIKD LSYL+L+ N ND A +R+VN Sbjct: 361 LYRTNSQSRLVEEALRRYGIRYTMVGGFSFYERAEIKDLLSYLKLVQNPNDSIALQRIVN 420 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 TP RGIG T++ + + + + + W L+EK L RA AL F+ LI+ Sbjct: 421 TPARGIGKTTMETLERIALETGTSTWNGIVRALREKLLPSRALVALDTFVRLIEDARALL 480 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEE 511 A V +SG + + + + + +E Sbjct: 481 APDFAEKLAADVAAESGEMSDAAEPESDTDFSFAAAADE 519 Score = 192 bits (490), Expect = 3e-47, Method: Composition-based stats. Identities = 74/178 (41%), Positives = 95/178 (53%), Gaps = 8/178 (4%) Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDED 527 + L +I SG E+E + +RIENL+EL A + E Sbjct: 609 FRKPGDPATLPELIKFLIDRSGYIRALEEEATPEAFSRIENLKELANAAQDAQERGE--- 665 Query: 528 LMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD 587 L FL HAAL + Q D V LMTLH+AKGLEFP V + GMEEG+FP +L Sbjct: 666 --TLNEFLDHAALVSDTDQFD-ADARVTLMTLHAAKGLEFPMVVLAGMEEGLFPHSRTLT 722 Query: 588 EGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVY--HRPSRFIGELPEECVEE 643 + ++EEERRL YVG+TRAM L LT A RR YG ++ PSRF+ E+P +E Sbjct: 723 DPNQMEEERRLCYVGLTRAMDSLILTRARYRRRYGNDMPEASTPSRFLEEIPAHLLEN 780 Score = 70.1 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 38/59 (64%) Query: 662 PMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 P ++G + GQRVRH K+GEG + +G GE++++ V F G+K LV +A+LE + Sbjct: 885 PAPSGNTGLRNGQRVRHPKYGEGIVFQRDGEGENAKITVQFAKFGVKKLVEKFAQLERL 943 >UniRef50_B0DAK6 Predicted protein n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0DAK6_LACBS Length = 1055 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 218/704 (30%), Positives = 332/704 (47%), Gaps = 81/704 (11%) Query: 1 MDVSYLLDSLNDKQRE-------------------AVAA-PRSNLLVLAGAGSGKTRVLV 40 M+V L+SLND Q AV P + L +LAG GSGKT+VL Sbjct: 1 MEV-NFLNSLNDAQLRGQTRPSISVIILLTRTTLVAVKYWPETPLQILAGPGSGKTKVLT 59 Query: 41 HRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLR 99 RIA L+ + P+SI AVTFTNKAA EMR R+ +L+G + + +GTFH L R LR Sbjct: 60 SRIAHLILNHHLPPFSICAVTFTNKAANEMRERLTKLIGKERTSQLRMGTFHALCARFLR 119 Query: 100 AHHMDANLPQDFQILDSEDQLRLLKRLIK----AMNLDEKQWPPRQAMWYINSQKD---- 151 + L ++F + D+E+ ++++ L+K + + P + + I+ K Sbjct: 120 KYAHLVKLAENFTVCDAEESKKIIQALLKPYTAYLASENLDLQPGRVVSSISKAKSKEQS 179 Query: 152 ------------------EGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELL 193 GL +++ +++ Y++ R +DF +LL Sbjct: 180 GSVFLEEVIKAERRIRQRNGLPLGDDVEEKKTIDRIIGEIFLEYEKTLKRNNALDFDDLL 239 Query: 194 LRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSI 253 +L+ + R +ILVDEFQDTN QY +R LA V IVGD DQSI Sbjct: 240 TYGVKLFTKNDETVIWCR----HILVDEFQDTNITQYKLMRALAIARC-VTIVGDPDQSI 294 Query: 254 YGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGA 313 YGWR A+V N+ + DFP E + LE+NYRST+ IL A+ A+I + R+ K L T Sbjct: 295 YGWRSAEVGNLSKMRRDFPDTEQVLLEENYRSTAAILKASLAIISQDKSRIQKSLHTSHP 354 Query: 314 DGEPISLYCAFNELDEARFVVNRIKTWQDN---GGALAECAILYRSNAQSRVLEEALLQA 370 +G LY E +EA F+ +K + + IL R NA SRV+E AL + Sbjct: 355 NGFTPVLYQVQTEHEEAAFIAIEMKRLVAHMGGALNWGDFVILLRFNALSRVIETALQKE 414 Query: 371 SMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTS 430 +P R+ GG +FFER E+KD L+YL+++ N N AF+R VN P RGIG++T+ + + Sbjct: 415 GIPSRVLGGHKFFERLEVKDLLAYLQVVDNPNFVPAFKRAVNVPGRGIGEKTVAELIGRA 474 Query: 431 RDRQLTLWQACRELLQE--KALAGRAASALQRFMELIDALAQETAD-MPLHVQTDRVIKD 487 + + + + F+ I +L + + +++ Sbjct: 475 EKSNQSPLAIVEAICDNKAPDIKPAVKRKVAPFVTAIRSLRAQAHNSSSPADLVRKLVDL 534 Query: 488 SGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLM---------------PLQ 532 ++ + + ++R EN++EL+T + + E+ PL+ Sbjct: 535 IKYEDHLKKTQSD-WESRWENVKELITFASEMEAQNQAEEAADAVAGGDNSIEMSTTPLR 593 Query: 533 AFLSHAALEAGEGQ--ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGG 590 FL + L + + +D V + T HSAKGLE+P V I +++ FP S D Sbjct: 594 QFLQASMLSSEGDNQSEEGNKDKVTISTCHSAKGLEWPVVMIPSVDQNTFPFYRSEDTA- 652 Query: 591 RLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIG 634 EERRL YV TRA L ++ A TR + G+ S FI Sbjct: 653 ---EERRLLYVACTRAQSLLYVSRATTRMVAGETKSKELSEFIS 693 >UniRef50_Q6MFN4 Related to ATP-dependent DNA helicase n=7 Tax=Sordariomycetes RepID=Q6MFN4_NEUCR Length = 1105 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 205/671 (30%), Positives = 331/671 (49%), Gaps = 53/671 (7%) Query: 5 YLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTN 64 +LDSLN+ Q AV + + + +LAG GSGKT L R+ WL+ P ++ TFT Sbjct: 10 SILDSLNNAQARAVTSDAATVAILAGPGSGKTHTLTSRVVWLVDHVGYQPQDVVVATFTV 69 Query: 65 KAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLL 123 KAA EM+ RIG+ +G + + +GTFH +A R L A+ L + F I D D ++ Sbjct: 70 KAAREMKERIGKALGNGRENKIILGTFHSIARRYLAAYGRHIGLSEKFSIADDNDSRSII 129 Query: 124 KRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK-------VYQA 176 R+ K + L P A +I+ +K +G+ P P +Q Q+ Y Sbjct: 130 TRICKRLQLG---LDPPMAKAWISKKKAKGMEPSPSSLPQPPKKQPVQRGQRDLEVCYTE 186 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 YQ +R+ L+D+ +LL+R EL P + + + +L+DE+QDTN +QY +RLL Sbjct: 187 YQTHLERSNLLDYDDLLVRCVELLRKFPSCVSNIQT----VLIDEYQDTNGVQYELMRLL 242 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A ++ IVGD DQSIYGWR A+++N+ R L D+P + I LE+NYRS+ IL + + Sbjct: 243 AQKHQRITIVGDPDQSIYGWRSAEIKNLWRLLRDYPKTDEISLEENYRSSQAILDLSLLV 302 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT-WQDNG--GALAECAIL 353 I+ + R K L G L N EA ++V I+ +G + A+L Sbjct: 303 IQQDKKRYQKVLKPVHDRGSRPVLRKLKNASTEAEWIVAEIRRALLMSGSMLTHNDVAVL 362 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 RS + SR +E AL +A +PYR+ GG +F+ER EIK L YLR+I +++ AF R++N Sbjct: 363 LRSASLSRHVESALGKAGIPYRMVGGFKFYERSEIKTILDYLRVIHQPDNNDAFGRIMNV 422 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQAC-----RELLQEKALAGRAASALQ-RFMELIDA 467 P RGIGD T+ + + + L+L+ + + + A + + +++ Sbjct: 423 PKRGIGDGTIKNLIEEAEKSSLSLYSLLVKHCRGDRTAKTKITKHAEQKISGELIRMLNG 482 Query: 468 LAQETADMP------LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + ++ + L + ++ + + + + R N++E ++ F Sbjct: 483 IRKKMEEAAESNPFGLVDLIEHLLTALNFQNYLQVTYPDDHEQRWANVQEFISLANDFVR 542 Query: 522 N---------------EEDEDLMPLQAFLSHAALEAGEGQADTWQDA---VQLMTLHSAK 563 + E+ ++ L FL++ +L + + + Q+ V + T+H+AK Sbjct: 543 DLHVSGEDALPEIEGLEQSKEEEVLPQFLANVSLASDAQKGEEGQENKPLVTISTIHAAK 602 Query: 564 GLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGK 623 GLE+P VFI + G P S D +EERRL YV +TRA L L+Y G Sbjct: 603 GLEWPIVFIPAVYNGSIPHMRSEDG----DEERRLLYVAMTRAQSLLYLSYP-VYHSPGS 657 Query: 624 EVYHRPSRFIG 634 S F+ Sbjct: 658 SERTEMSSFVS 668 >UniRef50_A8Q3F1 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8Q3F1_MALGO Length = 876 Score = 668 bits (1724), Expect = 0.0, Method: Composition-based stats. Identities = 214/696 (30%), Positives = 328/696 (47%), Gaps = 71/696 (10%) Query: 6 LLDSLNDKQREAVAAP-RSNLLVLAGAGSGKTRVLVHRIAWLM----SVENCSPYSIMAV 60 +L L+D QR AV + L +LAG GSGKTRVL R+AWL+ + P + V Sbjct: 2 MLSGLSDAQRTAVTSDASRPLQILAGPGSGKTRVLTTRVAWLVQGAPDRKPIPPSQCVVV 61 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWV-GTFHGLAHRLLRAHHMDANLPQDFQILDSEDQ 119 TFTNKAAAEMR R+ L+G + M + GTFH R LR L + F I D++D Sbjct: 62 TFTNKAAAEMRSRLQALIGEERTRMLILGTFHATCARFLRRWGERIGLSRQFTIADADDA 121 Query: 120 LRLLKRLIKAMNLD----EKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQT------ 169 R++K + + D + + P A+ I+ K + +S T Sbjct: 122 KRIIKDICADFDADMASDDVRVKPETAIAAISRAKSRCMNAVQWRSMSKYPPGTAMHEEH 181 Query: 170 --WQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNN 227 ++Y Y+ +DF +LL+ +L+ P + + ++LVDEFQDTN Sbjct: 182 TYVCRIYAEYESRLASHNALDFDDLLMYGVKLFREHPFLSL---DHIEHVLVDEFQDTNA 238 Query: 228 IQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTS 287 +QY + ++ V IVGD DQSIY WR A V +++R DFPG + + LEQN+RST Sbjct: 239 VQYELMCHMSAGNKCVSIVGDPDQSIYSWRHADVSHLERMRTDFPGVQRVLLEQNFRSTP 298 Query: 288 NILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD---NG 344 +IL AA ++++ + R+ K L+T A G P+ L + +EAR++ I Sbjct: 299 SILDAALSVMQQDKLRIQKGLYTSHAQGAPVVLRAFHDADEEARYIALEILRHVQCTGGL 358 Query: 345 GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDD 404 A+ +IL R NAQSR LE AL + +PYRI GG+RFF+R EIKD L+YL + N Sbjct: 359 LTFADISILLRFNAQSRPLEAALQRHGIPYRILGGLRFFDRAEIKDLLAYLVVTENPAYT 418 Query: 405 AAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACREL--LQEKALAGRAASALQRFM 462 R++N P RGIG +++ + ++ Q+ L + + ++ +F+ Sbjct: 419 PGVLRILNVPKRGIGTKSVQALLAAAQAEQVPLLTYLERVSPAAAYGMRPAVVKSVSQFV 478 Query: 463 ELIDALAQETAD-MPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS- 520 + I L + + V+K + + +R EN++ELV+ Sbjct: 479 QTIQELRNAAENGSSVADLLHLVLKLTRYEEHLRPD--PDFDSRWENVQELVSFASSIDL 536 Query: 521 ---------------------------------------YNEEDEDLMPLQAFLSHAALE 541 + +E+ PL AFL +AL Sbjct: 537 PPQSPPSHHGEPVRKRARVSENRPEDANEFSVHNIVDNVHADEEVATTPLSAFLESSALA 596 Query: 542 AGEGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY 600 + G + A V + T H+AKGLE+P VF+ E+G++P S EERRL Y Sbjct: 597 SDLGVQEGSPPAMVTISTCHAAKGLEWPVVFLPASEDGIYPFYRST-TPEERREERRLYY 655 Query: 601 VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 V +TRA L L+++ R + + + S F+ L Sbjct: 656 VAMTRAQTNLILSWSHRRLVMSEWSSRQLSPFLAPL 691 >UniRef50_Q7NB99 UvrD n=1 Tax=Mycoplasma gallisepticum RepID=Q7NB99_MYCGA Length = 753 Score = 667 bits (1722), Expect = 0.0, Method: Composition-based stats. Identities = 233/763 (30%), Positives = 375/763 (49%), Gaps = 58/763 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M + L SLN +Q + V + + V+AGAG+GKT+VL RIA+L+ Y I+A+ Sbjct: 1 MIMQDYLKSLNKQQYDVVTSDLIPIFVVAGAGTGKTKVLTSRIAYLIEHFKIPEYKILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQD-FQILDSEDQ 119 TFTNKAA EM+HR+ +L+ + + TFHG ++LR + + D F ILD DQ Sbjct: 61 TFTNKAAKEMQHRLEKLLNKEKTQVSFRTFHGFCAQVLREEVNNVDRLNDRFNILDEVDQ 120 Query: 120 LRLLKRLIKAMNLDEK-----QWPPRQAMWYINSQKDEGLRPHHIQSYG----------- 163 +L++ L+K+ + + + M IN K L + Sbjct: 121 AKLIEDLLKSQKYEYYYSQYTDFKKNKVMSIINDAKTYNLDVAEFLASDLNKLGEDHILT 180 Query: 164 NPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQ 223 + Q Y Y++A +DF +LL A+ L+LN P IL+ ++ R+ ILVDEFQ Sbjct: 181 PNLVQPLSNFYHDYEKALKELNAIDFNDLLNIAYNLFLNDPIILKKWQNRYEAILVDEFQ 240 Query: 224 DTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNY 283 D N IQY ++LL + VGD DQSIYGWRGA E DF L QNY Sbjct: 241 DANEIQYKIVKLLREKNNNFLFVGDPDQSIYGWRGANSEIGDSIRFDFNDLVVKYLTQNY 300 Query: 284 RSTSNILSAANALIENNNGRLGKKLWTD--GADGEPISLYCAFNELDEARFVVNRIKTWQ 341 RS +IL+ AN I+ NN R K L + G N + RFV+++IK Sbjct: 301 RSKQSILNLANDAIKMNNSRYFKSLLSHDLTDLGPKPIWINFSNIEYQNRFVMDKIKELV 360 Query: 342 DNG-GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN 400 + + AILYR+N S LE + + +PY I+GG +FF R+EIKD + YL+L+ + Sbjct: 361 ASKQYTYGDFAILYRTNFSSVSLERLIKENRIPYEIFGGYKFFLRKEIKDLIGYLKLV-D 419 Query: 401 RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQR 460 N+D AF+R++NTP R IGD +++++++ + + +T ++A + L E + + Q Sbjct: 420 TNNDIAFDRIINTPRRMIGDTSIEIIKELANKKSITEYEAL-DYLDESNIKANVKKSAQN 478 Query: 461 FMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS 520 F ++I+ L + ++ + +IK + T+ +++ E + ++ Sbjct: 479 FKKMIEDLRANQGNWSVYQTINEIIKRINYYDYLNE------PTKHDSVNEFIDFLNKYE 532 Query: 521 YNEEDEDLMPLQ--AFLSHAALEAGEG--QADTWQDAVQLMTLHSAKGLEFPQVFIVGME 576 E++ L F+ + ALE Q + ++A++LMT+HSAKGLEF VF++ M Sbjct: 533 KEYENDFGTKLTINDFIQNLALEGDLDNNQPNHNKNALKLMTIHSAKGLEFKNVFVINMN 592 Query: 577 EGMFPSQMSL---DEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFI 633 E + PS S+ + +L EERR+ YV TRA L L + KE ++PSRF+ Sbjct: 593 ENILPSSRSIAATNNKAKLAEERRIVYVAYTRAKHNLWLCSNQDYDARTKE-PYQPSRFL 651 Query: 634 GELPEECVEEVRLRA----------------TVSRPVSHQRMGTPMVENDSGYKLGQRVR 677 EL + +++ + S E + Y +G+ + Sbjct: 652 YELSDLVLDKQDQAKTYFDKHNFLTDDDGWFNSKKSPSKLDAWNSTNEVEHNYFVGEIIY 711 Query: 678 HAKFGEGTIVNMEGSGEHSRLQVAFQG--QGIKWLVAAYARLE 718 H +GEG + + + ++V+F+ G K L+ + + Sbjct: 712 HQLYGEGIVREI----DDLTIKVSFKDKKAGTKDLIKNHKLIT 750 >UniRef50_Q2NK11 UvrD helicase n=2 Tax=Candidatus Phytoplasma asteris RepID=Q2NK11_AYWBP Length = 761 Score = 666 bits (1719), Expect = 0.0, Method: Composition-based stats. Identities = 225/744 (30%), Positives = 358/744 (48%), Gaps = 43/744 (5%) Query: 2 DVSYLLDSLNDK----QREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSI 57 + + L+ LN Q AV + + + AGAG+GKT L +IA+L+ + I Sbjct: 14 NKNNFLEKLNKPLNQTQLAAVTSNAKSFYLAAGAGTGKTTTLTAKIAYLIEQKKLPSNQI 73 Query: 58 MAVTFTNKAAAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDA--NLPQDFQIL 114 +A+TFTNKA +M+ ++ Q++G G+ + TFH L ++LR + +F+IL Sbjct: 74 LALTFTNKAVKQMKEKLDQMIGKEKTKGITICTFHSLGTQILRKFIPFLPFSYRNNFKIL 133 Query: 115 DSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQK------DEGLRPHHIQSYGNPVEQ 168 D D ++LK ++K MN+D K+ + I+ K +E H Q N + Sbjct: 134 DDNDCKKILKDILKEMNIDPKRVKISELKKSISDIKRKHEPQNEDTLQHSTQKEKNYQRE 193 Query: 169 TWQK----VYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQD 224 + + YQ LVDF +L+L H+L ++ Y+++F +LVDEFQD Sbjct: 194 KKYEFEMPIKVKYQIFLQNNNLVDFDDLILYTHQLLQENANVRVFYQQKFQYLLVDEFQD 253 Query: 225 TNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYR 284 T+ QY + LLA + + +VGD DQ+IY +RGA+ EN Q FLN F + LE+NYR Sbjct: 254 TDFFQYQILTLLAKEHQNIFVVGDPDQNIYSFRGARFENSQLFLNKFKP-KIAFLEENYR 312 Query: 285 STSNILSAANALIENNN-GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDN 343 S+ NIL AN LI+ N K L + + GEP+ + +E R++ I+ Sbjct: 313 SSKNILDKANLLIKYNKAHLFKKNLKSTKSGGEPVICKFFADYKEETRYIAKTIQNLVLQ 372 Query: 344 G-GALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN 402 G + + ILYR+N R LEE L ++PY+++GG F++ + +KD L+YL IAN + Sbjct: 373 GVYSYQDFTILYRTNILGRPLEEKFLANNIPYQVFGGASFYQSKLVKDFLAYLNFIANPS 432 Query: 403 DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM 462 D F+R++NTP RGIG +L + + ++++++TL+ + L + + A + L Sbjct: 433 QDFNFKRIINTPKRGIGTTSLLHLEKLAQEKKITLFDTLK-YLDQTPIQPNAKTKLNELK 491 Query: 463 ELIDALAQETADMP---LHVQTDRVIKDSGLR----TMYEQEKGEKGQTRIENLEELVTA 515 +LI L Q+ + L + + + + + + + +EEL + Sbjct: 492 KLITNLRQKLINDSFDCLSDIITYIDEKIEYCRKNDETCKMQSIKDSDSDLYYIEELKSV 551 Query: 516 TRQFSYNEEDEDLMPLQAFLSHAALEAGEGQ-------ADTWQDAVQLMTLHSAKGLEFP 568 Q N E L L +L + + D V+L T+H KGLEF Sbjct: 552 FMQAEKNLEGSIFEKLTQLLDQISLYNETNEQTEQDSKNPSKNDRVKLSTIHKVKGLEFR 611 Query: 569 QVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHR 628 VFI E+ F + E LEE RRLAYV VTRA +KL LT A R YGK++ + Sbjct: 612 VVFITAFEDIFF--DCNQKEKSDLEESRRLAYVAVTRAEEKLFLTGAYQRFSYGKQIDSQ 669 Query: 629 PSRFIGELPEECVEEVRLRATVSRPVSHQRMGT-PMVENDSGYKLGQRVRHAKFGEGTIV 687 PSRF+ E+ E R + + ++ G +V+H G G + Sbjct: 670 PSRFLQEMGIFQKETPRSNYFSPHLFQPNQSNQASFTNGNGFFQKGDKVKHKTLGLGVVE 729 Query: 688 NMEGSGEHSRLQVAFQGQG-IKWL 710 + +QV F +K Sbjct: 730 AIMQD----LIQVRFINYQNVKIF 749 >UniRef50_B6QHN1 ATP-depentend DNA helicase, putative n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHN1_PENMQ Length = 1006 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 229/678 (33%), Positives = 342/678 (50%), Gaps = 52/678 (7%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENC-SPYSIMA 59 MD+ +L+ LN QR AV +P S L VLA GSGKT+ L R+A+L+S ++ P ++ Sbjct: 1 MDIDPILNGLNAAQRTAVTSPSSILQVLAPPGSGKTKTLTARVAYLLSSKHAFRPQDVIC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFT KA+ EMR R+ L+G + +GTFH + R L A+ L + F I DS D Sbjct: 61 CTFTIKASREMRERLTHLIGDQVVSKLVLGTFHSICRRYLVAYGHLIGLKKGFGIADSND 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP---VEQTWQKVYQ 175 L ++KR++K +NL+ P A I+SQK +G+ + +P +Q + +VY+ Sbjct: 121 GLAIIKRIVKRLNLN---IQPNPARSRISSQKAQGISWQDLIDARHPKSVDQQEFVQVYR 177 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+ A + L+D+ +LLLR +L PH + + + +LVDEFQDTN IQY + L Sbjct: 178 EYEAALASSNLLDYDDLLLRCVDLLRQHPHCVSNVQT----VLVDEFQDTNVIQYELMNL 233 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 A ++ IVGD DQSIYG+R A+++N++R +P + LE NYRS+ +IL +A Sbjct: 234 FAAQNKRITIVGDPDQSIYGFRSAEIKNLERMQRRYPNTSVVLLEDNYRSSGSILGSAEQ 293 Query: 296 LIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT---WQDNGGALAECAI 352 +IE + R KKL G L EA+++V IK ++ AI Sbjct: 294 VIEQDTARPVKKLHPTHGVGTMPVLRKLPTAAAEAQWMVMEIKRCITLTGQLLKSSDFAI 353 Query: 353 LYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVN 412 L RS A SR +E L + +PYR+ GG RFF+R EI+ L YLR+I++ ++ A R++N Sbjct: 354 LLRSAALSRQIESELGKQGIPYRMVGGSRFFDRVEIRLLLDYLRVISHPENNDALARIIN 413 Query: 413 TPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELIDA 467 PTR IGD TL + + L LW +++ Q +K L+ A L + LI+A Sbjct: 414 VPTRKIGDETLKSLTAGAESANLPLWTFIKDVAQGRRSCQKGLSKAANIGLSVLVGLIEA 473 Query: 468 LAQE----TADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTAT------- 516 Q+ + V + VI G R + R N+EEL+ Sbjct: 474 SRQKLHDCIDESSPRVLLEFVISKLGFREYLTATYPLDEENRWANVEELLAQAGDSSTSY 533 Query: 517 ----------RQFSYNEEDEDLMPLQAFLSHAALEAGE--GQADTWQDAVQLMTLHSAKG 564 ++ L FL++ AL + D Q+ V + T+H+AKG Sbjct: 534 SQQDDILPEIEGLEQHQGHIGEEALSRFLANVALSTEVTTEEGDQPQEKVTISTIHAAKG 593 Query: 565 LEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE 624 LE+P VF+ + EG+ P + D +EERRL YV +TRA L L+ G+E Sbjct: 594 LEWPVVFVAAVYEGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSLPRRDSKNGEE 649 Query: 625 VYHRPSRFIGELPEECVE 642 S F+ P VE Sbjct: 650 TRT--SSFL---PPSIVE 662 >UniRef50_C1E652 ATP-dependent DNA helicase n=2 Tax=Micromonas RepID=C1E652_9CHLO Length = 907 Score = 664 bits (1714), Expect = 0.0, Method: Composition-based stats. Identities = 223/700 (31%), Positives = 342/700 (48%), Gaps = 67/700 (9%) Query: 7 LDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKA 66 L+ +ND+Q A+ AP + + VLAG GSGKTRVLV R+ L++ P I+ +TFTNKA Sbjct: 56 LEGMNDEQIAAIVAPVAPMKVLAGPGSGKTRVLVGRVTHLINELGVPPSHILCITFTNKA 115 Query: 67 AAEMRHRIGQLMGTS-QGGMWVGTFHGLAHRLLRAHHMDA---NLPQDFQILDSEDQLRL 122 A EMR R+ +G + GTFH +A R+LR H DF I D D + Sbjct: 116 AREMRERLVASVGEENARQITAGTFHSVASRMLRKHVHLLDGYGRGNDFVIYDEADTKSI 175 Query: 123 LKRLIKAMNL-DEKQWPPRQAMWYINSQKDE-----GLRPHHIQ----------SYGNPV 166 +++++ + + D+K+ P A I++ K G+ + + Sbjct: 176 IRKIMVDVFMEDKKKADPALAKSRISAAKSAVDACVGMDGRRMARALCDTRPSLKRDPYI 235 Query: 167 EQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTN 226 + ++Y Y+ + +DF +LL A L YR+R+ ++LVDEFQDT+ Sbjct: 236 RDQFPRLYDEYEANLRSSNALDFDDLLSAAVALLRTSEEARLFYRQRWRHVLVDEFQDTS 295 Query: 227 NIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQ-RFLNDFPGAETIRLEQNYRS 285 QY IR LA +T +V +VGD DQ+IY WRGA+V NI+ +F +DF GA T+ L +NYRS Sbjct: 296 LSQYELIRALAAETARVFVVGDVDQAIYSWRGAEVANIRTKFDSDFAGAGTVLLTKNYRS 355 Query: 286 TSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGG 345 T+ I+ AA A+I + R +L G+ +++ +E++EA F +G Sbjct: 356 TATIVKAAQAVIGESRDRSPLELDAVRPGGKDVAVVATEDEIEEADFAAREAARAARSGV 415 Query: 346 ALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDA 405 L + A+LYR+++QSR LEEA ++A +P+ + G F+ R+EIKD ++YLR++ N D Sbjct: 416 PLKDIAVLYRTHSQSRPLEEAFIRAGVPHVVVGDTAFYTRKEIKDLVAYLRVLFNSRDTV 475 Query: 406 AFERVVNTPTRGIGDRTLDVVRQTS-------------------RDRQLTLWQACRELLQ 446 + +R++NTP R IG TL+ + + R Sbjct: 476 SLQRIINTPPRKIGPGTLEKLEAWAAGLPWVDGMPQPLGMALLDRTWSTPDQDDLLPPAA 535 Query: 447 EKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRI 506 + LA A A+ F+ ++ L + T+ V++ G E G R+ Sbjct: 536 DMGLAAGAYKAVSGFVSVMRELGEAVEVSDPGALTEEVVRRIGFEEYV--ADMENGDERV 593 Query: 507 ENLEELVTATRQFSYNE---------------------EDEDLMPLQAFLSHAALEAGEG 545 ++ELV+ S E + L FL +L Sbjct: 594 GYVKELVSIASDPSAVESLDGVDGGGAAGGGDNGATKRKSTGHAGLGEFLEGISLLMSAE 653 Query: 546 Q--ADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQM--SLDEGGRLEEERRLAYV 601 D DAV+LMTLH+AKGLEF V I G E+ + P + + + +EE RL YV Sbjct: 654 TRSEDEGADAVKLMTLHAAKGLEFDTVLITGCEDELIPFKRGDASSDAAEHDEEVRLFYV 713 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECV 641 G+TRA +KL L A R+ +G+ VY PS F+ + E V Sbjct: 714 GLTRAKRKLFLCRAFKRQRFGRTVYADPSPFLEVIRESLV 753 >UniRef50_B2WB64 ATP-dependent DNA helicase pcrA n=2 Tax=Pleosporineae RepID=B2WB64_PYRTR Length = 851 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 216/668 (32%), Positives = 342/668 (51%), Gaps = 49/668 (7%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 + LL+ LN+ Q+ AV +P + + VLA GSGKT+ L R+A+ ++ E P++I+ TF Sbjct: 1 MEALLEGLNEAQKSAVTSPANVVQVLAPPGSGKTKTLTARVAYHINHERLQPWNIIVCTF 60 Query: 63 TNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLR 121 T KAA EM+ RI +G + +GTFH +A R L + + + ++F I D+ D Sbjct: 61 TIKAAREMKERIKGFVGDKLEAKLILGTFHSVARRFLYRYGQEIGIDKNFGIADTSDSTS 120 Query: 122 LLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHH-IQSYGNPVEQTWQKVYQAYQEA 180 +LKR+I P A I+ K +G+ ++ N E + VY +YQE Sbjct: 121 ILKRIITRYQ---YTVEPGHARSRISKLKAKGITADDNTRTAKNVNENEFAMVYSSYQEH 177 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 + L+D+ +LL+R +L P + + +L+DE+QDTNNIQY + LLA T Sbjct: 178 LAASNLLDYDDLLMRCVDLLKKSPSCVSTIQA----VLIDEYQDTNNIQYELMSLLAQKT 233 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 ++ IVGD DQSIY +R A+++N+ R D+P + I LE NYRS+ ILS+A A+IE + Sbjct: 234 KRITIVGDPDQSIYSFRSAEIKNLLRMRTDYPESVVINLENNYRSSGCILSSAMAVIEQD 293 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRI---KTWQDNGGALAECAILYRSN 357 R K L GE +L + EAR++V I KT + + AIL RS+ Sbjct: 294 ESRPQKALVATHGIGEQPTLRHLISANVEARWIVEEIHRTKTLTAGLLSFNDYAILVRSS 353 Query: 358 AQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRG 417 + +E AL QA +PYR+ G +FF+R EIK L YLR+I+ + + A RV+N P+R Sbjct: 354 PLTLQIERALGQAGIPYRMVAGTKFFDRAEIKIILDYLRVISQPDHNDAVARVINVPSRK 413 Query: 418 IGDRTLDVVRQTSRDRQLTLWQACRELLQEK-----ALAGRAASALQRFMELI-----DA 467 +GD T+ + + + R++TLW+ ++ Q + ++ +A + +F+ +I Sbjct: 414 VGDVTVKALLEEAEVRKVTLWKLVLDVAQGRRKPQCKVSAQANIGISQFVNVILTSREKL 473 Query: 468 LAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFS------- 520 L ++ + L V+ ++ +Q E Q R N+EEL+ Q + Sbjct: 474 LPAKSDECDLFGLIMHVLNKIAFQSYLKQAHKENWQDRWANVEELINQATQMATAVANGE 533 Query: 521 -------------YNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEF 567 D L FL++ L + Q + D V + T+H+AKGLE+ Sbjct: 534 EISDDALPEVEGLEQRSDTAADLLSKFLANVTLSSAADQDGSELDQVTISTIHAAKGLEW 593 Query: 568 PQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYH 627 P VF+ + +G P + D+ +EERRL YVG+TRA L L+ + + Sbjct: 594 PVVFMPAVYDGSIPHSRAEDQ----DEERRLLYVGMTRAQGLLYLSCPVKQSGQEQTTL- 648 Query: 628 RPSRFIGE 635 SRFI + Sbjct: 649 --SRFISD 654 >UniRef50_B3DUG1 ATP-dependent DNA helicase UvrD/PcrA n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DUG1_METI4 Length = 636 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 213/657 (32%), Positives = 339/657 (51%), Gaps = 30/657 (4%) Query: 3 VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTF 62 ++ LN++Q++AV AP +LV+AGAGSGKTR L +R+A+L+ + +P I+ TF Sbjct: 1 MNRYEVELNEEQKKAVTAPLGPILVIAGAGSGKTRTLTYRVAYLI-EKGINPGRILLATF 59 Query: 63 TNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRL 122 TNKAA EM +R+ +L+ T +W GTFH L H++LR H Q+F I+D ED ++L Sbjct: 60 TNKAAREMLNRVDRLVNTDTSQIWGGTFHHLCHKILRNHAKTIGFEQNFTIIDREDSIQL 119 Query: 123 LKRLIKAMNLD--EKQWP-PRQAMWYINSQKDEGL----RPHHIQSYGNPVEQTWQKVYQ 175 L I+ +NL K +P P + + ++ S+ K+ Sbjct: 120 LTGCIEELNLKRGNKLFPSPEALLEVFSLVVNKVKPIWKTLEESFSHLAIFSDEITKLEY 179 Query: 176 AYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRL 235 Y+E + + D+ +LL +L+ K +IL+ Y+ F ILVDE+QDT+ IQ +I L Sbjct: 180 FYRERKKKLLVFDYDDLLFYTVKLFQEKENILKFYQSYFEYILVDEYQDTSRIQADFIDL 239 Query: 236 LAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANA 295 L + +VM+VGDD QSIY WRGA++EN+ F +P I ++ NYRST IL+ ANA Sbjct: 240 LGQSSQRVMVVGDDAQSIYSWRGAEIENMLNFPKRYPSTVVINIKTNYRSTPEILALANA 299 Query: 296 LIENNNGRLGKKLWTDGAD--GEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAIL 353 IE N + K+L L ++ +++ + I+ ++ G E AIL Sbjct: 300 AIEGNQFQFPKELRAARKSLQEIKPQLLLCYSTAVQSQVIAEFIEDFRKQGIEAKEMAIL 359 Query: 354 YRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNT 413 YR++ + ++ L + +P+ I G+RFFE+ IKD ++LR N D+ AF+R+V Sbjct: 360 YRAHFHALEMQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFFINPYDETAFKRIVKM 419 Query: 414 PTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETA 473 GIG +TL + ++ ++ A + ++++ L+ Sbjct: 420 FN-GIGPKTLSQLWAEYLASSGSI--------EKLRPPKAAEKSWMSWLDIHKELSSPGY 470 Query: 474 DMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQA 533 Q +R++ G+ + + E Q R+E++EEL+ ++ E Sbjct: 471 AHQPSKQLERILH--GVYADHLKMLYECYQRRLEDIEELINFASLYNSTE---------D 519 Query: 534 FLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLE 593 FL+ +L G + V+L T+H AKGLE+ VFI+ + EG+FPS SL+ LE Sbjct: 520 FLAQISLLTGVDTVQEQRGGVRLSTIHQAKGLEWKVVFIIMLCEGLFPSNYSLNHPTLLE 579 Query: 594 EERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV 650 EERRL YV TRA +L L Y R ++ + PSRF+ ELP+ V + + Sbjct: 580 EERRLFYVAATRAKDRLFLCYPARRSFNNRQSTYFPSRFLEELPKHLVIKTKFDRYS 636 >UniRef50_C4Z7Y1 DNA helicase II / ATP-dependent DNA helicase PcrA n=1 Tax=Eubacterium eligens ATCC 27750 RepID=C4Z7Y1_EUBE2 Length = 717 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 198/712 (27%), Positives = 352/712 (49%), Gaps = 33/712 (4%) Query: 11 NDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEM 70 +Q EA+ N+ V + GSGKT VL +RIA+L++ P SI+A+TFTNKAA++M Sbjct: 24 TKEQTEAITQTEGNIRVASVPGSGKTFVLTYRIAYLITELFVEPSSIVALTFTNKAASQM 83 Query: 71 RHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAM 130 +HR+ ++G + + GTFHG + L+ P+ F ILD + +L ++K + + M Sbjct: 84 KHRLRNIVGDNA-NCFTGTFHGYCNMFLKEEIHRLTFPKTFTILDKKAELEMIKDVAEDM 142 Query: 131 NLDEKQWPPRQAMWYINSQKDEG--------LRPHHIQSYGNPVEQTWQKVYQAYQEACD 182 + K ++ M I+ K + + ++ + + +KV+ Y + Sbjct: 143 GISLKDNTAKKIMSDIDITKQDMSYVELMAGVDKTELKRRASSEKNVDKKVFYNYLKRQC 202 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +L+ + + ++E+ +L DE+QD N Q + +L+G Sbjct: 203 DNYALDFEDLINFTLYILNRNEDVRIRWQEKCQYVLCDEYQDVNMKQDMLLHILSGLYQN 262 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDDDQ+IY WRG+ E + F + L +N+RST I++AA +LI N Sbjct: 263 LFVVGDDDQNIYTWRGSDPEYMINFDKTHENLQDYSLTENFRSTPQIVNAAKSLISANQN 322 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 RL K++ ++ DG A E E+ ++ + I ++ IL R+ +Q+R Sbjct: 323 RLEKQMISNRPDGNKPVFNAADTEEKESLWIADTILDNVAKNMKYSDHTILVRAASQTRS 382 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 LEEA ++ +PY+I G +F+E +EI+ LSY+R++ + D ++ P RG G ++ Sbjct: 383 LEEAFIKRKVPYKILSGAKFYESEEIRTVLSYMRMVYSLTD-MDLLYTISRPRRGFGKKS 441 Query: 423 LDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTD 482 ++ ++ + +L++A + +++ + + + I L + Sbjct: 442 VEKLKNAAAQNNCSLFKALGKQIEDGDI---TQKNVIEYYNAISELHDTYVTYTCTDIVN 498 Query: 483 RVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEA 542 + + G R EQ+ QTR++N+ EL+ + +++ + L LSH AL + Sbjct: 499 KCLD-MGYRKALEQDID---QTRLDNVSELIRTITALEEDNQEK--VELADLLSHFALFS 552 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVG 602 + + D + V++MT+H+AKGLEF VF+ G+ EG FPS L EEERRL YV Sbjct: 553 AQDE-DGEYNVVKVMTIHTAKGLEFDTVFVPGLVEGQFPSSR-LRNEDEYEEERRLLYVA 610 Query: 603 VTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTP 662 +TRA L L+ T R RPS F+ ++ ++ + + R V+ Q + Sbjct: 611 MTRAKNMLYLS---TYRKKDGRFAARPSAFLSDIDTNLLDCINNSRVLIRGVTEQMLPKA 667 Query: 663 MVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQ-GIKWLVAA 713 + +++G +VRH FG G IV ++ ++ F+ G + L+ Sbjct: 668 V------FEVGDKVRHKVFGTGEIVKVDKVT--QTYEIQFENIRGTRRLMFR 711 >UniRef50_A8ZTY6 UvrD/REP helicase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTY6_DESOH Length = 616 Score = 658 bits (1698), Expect = 0.0, Method: Composition-based stats. Identities = 211/636 (33%), Positives = 319/636 (50%), Gaps = 27/636 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 L+ +Q AV S LV AGAGSGKTR L +IA L+ P I+A+TFTNKAA Sbjct: 4 KLSPQQEAAVLHMGSPALVTAGAGSGKTRTLTAKIAHLI-SLGYPPERILAITFTNKAAD 62 Query: 69 EMRHRIGQLMG-TSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ L G G WV T+H +++L H QI D+ Q + + ++ Sbjct: 63 EMKRRLVALTGIPETGFPWVRTYHSACYKILCVHCGLLGYTTPLQIYDTYHQRKTITDVL 122 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 MN D+K P + +I+ K+ G ++ +Y Y+ Y+ V Sbjct: 123 IRMNHDKKFVP--TILNHISKAKNSGNPGAYLDAYPFISYVRLADAYELYERMLKEKNAV 180 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL ++ + + + Y+ERF ILVDE+QDTNN+Q LL + VG Sbjct: 181 DFDNILLCVRDILRDHDDVRRRYQERFEFILVDEYQDTNNLQEDLTGLLCR-GDNLFCVG 239 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD Q+IY +RG+ + + F + A +LEQNYRS I+ AN +I+ N+ ++ K Sbjct: 240 DDWQAIYSFRGSNMRHFLSFEQRYADARVFKLEQNYRSADTIVRVANDIIDYNHDKMDKT 299 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLEEAL 367 +++ G + +Y +E++EAR+V + + ++G A+LYR+ S E A Sbjct: 300 CFSE-ESGGTVEIYEFDDEVEEARWVARKAEELNEDGVPYDAMAVLYRTKFTSLYFEHAF 358 Query: 368 LQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVR 427 +A +PY + G F++R+E+ D SYL DD AFER++N P RG+G +TL + Sbjct: 359 RRAGIPYHLLGDRGFYDRKEVMDINSYLMAAVFEKDDTAFERIINIPRRGVGAKTLASIN 418 Query: 428 QTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVIKD 487 R ++L A L E+ L+ + AL M L+D + DM VI+ Sbjct: 419 D-MRTGAMSLQAAVHLALAERRLSDKVYQALSDLMALLDDIR----DMRPDAAIREVIER 473 Query: 488 SGLRTMYEQ---EKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 G +Q ++EN+++L++A + L A+L AAL + Sbjct: 474 IGYLNYLKQYADAGSMDFTEKVENIDQLISAAARMES---------LTAYLEEAALIRED 524 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + V L T+H+AKGLEF VF+VG EE + P SL+E L+EERRL YV T Sbjct: 525 KDDEEGGFGVNLATIHAAKGLEFHTVFVVGCEENLLPHWKSLEEEDDLQEERRLMYVAAT 584 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEEC 640 RA + L LT A R K ++R SRF+ E+ Sbjct: 585 RAARCLFLTAAGFR----KGQFNRRSRFLFEIERSL 616 >UniRef50_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=3 Tax=Trichocomaceae RepID=C8V6U5_EMENI Length = 997 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 217/684 (31%), Positives = 335/684 (48%), Gaps = 59/684 (8%) Query: 1 MD-VSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMA 59 MD + +LD LN QR AV + L VLA GSGKT+ L R+A+L++ + P ++ Sbjct: 1 MDPLDPILDGLNSAQRTAVTSSAPILQVLAPPGSGKTKTLTSRVAYLLAHDGYRPQDVIC 60 Query: 60 VTFTNKAAAEMRHRIGQLMGTSQ-GGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSED 118 TFT KA+ EMR R+ +L+G + +GTFH + R L + L + F I DS D Sbjct: 61 CTFTIKASREMRERLAKLVGDHVQSRLILGTFHSICRRYLVRYGHLIGLQKGFGIADSGD 120 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNP-----VEQTWQKV 173 L +++R++K + L P A I+ QK G+ P + + N + + +V Sbjct: 121 SLAIIRRIVKRLQLG---IQPNTARARISHQKAHGVSPDDVAAKQNKISKLLEHREFVQV 177 Query: 174 YQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWI 233 Y+ Y+ + L+D+ +LLLR EL P + + + +LVDEFQDTN IQY + Sbjct: 178 YREYESELATSNLLDYDDLLLRCAELLRKHPKCVSNVQ----VVLVDEFQDTNQIQYDLM 233 Query: 234 RLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAA 293 LLA ++ +VGD DQSIYG+R A++EN++R + E + LE NYRS+ +IL +A Sbjct: 234 NLLASWNRRITVVGDPDQSIYGFRSAEIENLKRMQRLYRNTEVVLLEDNYRSSGSILKSA 293 Query: 294 NALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKT---WQDNGGALAEC 350 +IE + R KKL G L + DEA+++V IK ++ Sbjct: 294 QDVIEQDLSRPAKKLQPTHTFGTLPVLRKLPSAEDEAQWLVLEIKRCIVLTGKLLKYSDF 353 Query: 351 AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERV 410 AIL RS + SR +E A+ + +PYR+ GG RFF+R E+K L YLR+I++ + A R+ Sbjct: 354 AILLRSASLSRQIESAMGKHGVPYRMVGGQRFFDRVEVKLLLDYLRVISHPENSEALLRI 413 Query: 411 VNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQ-----EKALAGRAASALQRFMELI 465 +N P+R IG+ T+ ++ + LW +++ Q EKA++ L + LI Sbjct: 414 INVPSRKIGEETVKMLLNGAEKAGKPLWDYIKDVAQGRRSTEKAMSKPTNQGLSSLVGLI 473 Query: 466 ----DALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSY 521 + L Q + V+K R G + R N+EEL++ + Sbjct: 474 EYSREKLRQCVDRSAPRRLLEIVMKRLSFREFITATYGSNDENRWANVEELMSQADDATA 533 Query: 522 NEE------------------DEDLMPLQAFLSHAALEAGE------GQADTWQDAVQLM 557 +E L FL++ AL D Q+ V + Sbjct: 534 ADESEQDENLPEIAGLTQQESHPGEEALSRFLANVALSTEVQPKEETEGEDQAQEKVTIS 593 Query: 558 TLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAET 617 T+H+AKGLE+P VFI EG+ P + D +EERRL YV +TRA L L+Y Sbjct: 594 TIHAAKGLEWPVVFIPAAYEGIIPHSRAEDS----DEERRLLYVAMTRAQALLYLSYPLR 649 Query: 618 RRLYGKEVYHRPSRFIGELPEECV 641 + + + F+ P+E + Sbjct: 650 QAR--ENAETNVTSFL---PQELI 668 >UniRef50_B3R0N7 ATP-dependent DNA helicase n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3R0N7_PHYMT Length = 708 Score = 655 bits (1690), Expect = 0.0, Method: Composition-based stats. Identities = 218/732 (29%), Positives = 380/732 (51%), Gaps = 37/732 (5%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M L LN KQ +AV + + ++AGAG+GKT+ L RIA+L+ N + I+A+ Sbjct: 1 MFSDEYLKQLNSKQYQAVTSKDKAVYLVAGAGTGKTKTLTIRIAYLIKYLNINNEKILAI 60 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDAN--LPQDFQILDSED 118 TFTNKAA+EM+ R+ + + TFH L +R+L+ N ++ ILD +D Sbjct: 61 TFTNKAASEMKERLVAM-KVDIYKSTICTFHSLGNRILKKFIHVLNNNFDSNYSILDIKD 119 Query: 119 QLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQ 178 L+++K++ K +N+D++++ P++ YI++ + + + + K+Y YQ Sbjct: 120 SLKIIKKISKDLNIDKEKYKPKELNKYISNI----KNKKEKKIFIDNYDNNILKIYNNYQ 175 Query: 179 EACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAG 238 + + L+DF +L++ ++L +I +++ +FT+IL+DEFQDT+ +QY ++LL Sbjct: 176 QFLENNNLLDFDDLIIYTYKLLKKHENIKNYFQNKFTHILIDEFQDTDFLQYQILKLLNT 235 Query: 239 DTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIE 298 + VGD DQSIY +RGA++ N + FL DF A+T+ L++NYRST+NIL AN LI+ Sbjct: 236 KNNYIFAVGDPDQSIYSFRGAEITNNKLFLKDFK-AKTLILDENYRSTNNILDKANLLIQ 294 Query: 299 NNNG-RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQ-DNGGALAECAILYRS 356 NN+ KKL + G + N+ E FV +IK + AILYR Sbjct: 295 NNSFYGFTKKLQSFFGKGHKVFPKMFENDDQEVDFVAEKIKNLIKKEKCNYEDIAILYRL 354 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 N + E+ L+ ++PY ++G + FF R+EIKD L+Y++++ + D +R++N P+R Sbjct: 355 NGLEKKFEKIFLKKNIPYIVFGNINFFNRKEIKDILAYIKILIDPKQDFYLKRIINVPSR 414 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMP 476 IG +T+ + S+++ ++L++ L +E+ + L F LI + ++ Sbjct: 415 KIGKKTISNLEIISKEKNISLFETLILLCKEE---KKCNKNLLNFKNLILEMIKKINSNS 471 Query: 477 ---LHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTAT-RQFSYNEEDEDLMPLQ 532 L D + + ++K + +E+L + ++ +++ L Sbjct: 472 FLKLENIIDYIDQKVNYSKSINKKKINPENDNLTYIEDLKSFFTKKKDQDKKKTVKQELI 531 Query: 533 AFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRL 592 L +L + + ++ V L T+H KGLEF VF+V EE + P + + L Sbjct: 532 DILDQISLNNEVKKDN--KNKVTLSTIHKIKGLEFKIVFVVYFEENILPLKNNKYNAP-L 588 Query: 593 EEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRATVS 651 EEERR+AYV +TRA ++L L A R ++G K + + S F + Sbjct: 589 EEERRIAYVAITRAKERLFLLGAYERNIFGHKTINIKESDFFENMKIFL----------P 638 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQ-GQGIKWL 710 R S N + +K+G +++H FG G I+ + E++ L +AF+ GIK + Sbjct: 639 RKKSISESKYQFNNNYNFFKIGDKIKHDIFGIGRII---TNIENNLLIIAFEPQFGIKKI 695 Query: 711 VAAYAR--LESV 720 YA+ L+ + Sbjct: 696 AYDYAKINLKKI 707 >UniRef50_C0QC97 PcrA1 n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QC97_DESAH Length = 619 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 218/637 (34%), Positives = 343/637 (53%), Gaps = 29/637 (4%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 L+++Q+ AV S LV+AGAGSGKTR L +I L+ + P I+A+TFTNKAA Sbjct: 2 ELSEQQQTAVLHTGSPALVVAGAGSGKTRTLTAKIMHLIG-QGFDPTRILAITFTNKAAQ 60 Query: 69 EMRHRIGQLMGTSQGG-MWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM+ R+ +L G WV T+H + + H + QI Q +++ ++ Sbjct: 61 EMKSRLYKLSGLGYAKFPWVRTYHSACLVIFKTHSHEIGYSSPIQICSIYQQKKIVTEIL 120 Query: 128 KAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLV 187 NL++K + I+ K+ + + +Y+AY++ A LV Sbjct: 121 VNNNLEKKH--AGNLISIISRAKNSANPDRYFDEHPRMGIIRVVDLYKAYEQRLFEANLV 178 Query: 188 DFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVG 247 DF +LL+ ++ + P I Q Y+++FT+ILVDE+QDTNN+Q RLL GD G + VG Sbjct: 179 DFDNILLKTRDILRDFPEIQQRYKQQFTHILVDEYQDTNNLQDELTRLLLGDHGNLFCVG 238 Query: 248 DDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKK 307 DD Q++YG+RG+ V + +F N + A RLE+NYRS I+ AAN LI+ N ++ KK Sbjct: 239 DDWQAVYGFRGSNVNHFLQFSNRYDNARIFRLEENYRSADEIVQAANGLIDFNADKMDKK 298 Query: 308 LWTDGADGEPISLYCAFNELDEARFVVNRIKTW--QDNGGALAECAILYRSNAQSRVLEE 365 ++ G + ++ F+E +EA +V R+K + G + A++YR+ S E+ Sbjct: 299 CFSQKKGGV-VEIHEFFSEGEEAEWVAKRLKALNCKGEGIDFDKIAVVYRTKFCSLAFEK 357 Query: 366 ALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLDV 425 +PYR+ G FFER EI D SYL NDD +FER++NTP RGIG + Sbjct: 358 IFRMFKIPYRLMGAQGFFERMEILDINSYLSAAQFPNDDVSFERIINTPKRGIGPAMVKK 417 Query: 426 VRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRVI 485 + ++ ++L A R+++QE+ L + L + +EL+D+L D+P + +RV+ Sbjct: 418 IGT-MKEEGMSLSGAARKMVQERVLTPKIHGELSKLLELLDSL----WDLPPNQAMERVL 472 Query: 486 KDSGLRTMYEQEKGEKGQ--TRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL-EA 542 + +++ + + ++ EN+E+LV R+ + +L AAL Sbjct: 473 DGTAYFDYLKKKVKTEAEFISKKENIEQLVYTARE---------KSTILEYLEEAALIRE 523 Query: 543 GEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR-LEEERRLAYV 601 D + V L+T+HSAKGLEF VF+VG EE +FP S+D G + ++EERRL YV Sbjct: 524 DTKDEDDDGEGVALLTIHSAKGLEFDTVFVVGCEEKLFPHWRSIDAGEQAIQEERRLMYV 583 Query: 602 GVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPE 638 +TRA + L L++A R K + SRFI ++ E Sbjct: 584 AMTRAERFLYLSHANYR----KGQFAMRSRFIDQIEE 616 >UniRef50_B9XNK2 UvrD/REP helicase n=2 Tax=Verrucomicrobiales RepID=B9XNK2_9BACT Length = 692 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 216/681 (31%), Positives = 331/681 (48%), Gaps = 51/681 (7%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN++Q AV AP LV+AGAGSGKTR L R+ +L+ + I+ +TFTNKAA Sbjct: 23 ELNEQQHAAVTAPPGPSLVIAGAGSGKTRTLTFRVGFLL-EQGIPADRILLLTFTNKAAR 81 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 EM R+ L+G +W GTFH + +R+LR H +DF I+D ED L+ + Sbjct: 82 EMMRRVSDLLGQDLPSLWGGTFHSIGNRILRQHAPLLGYQRDFSIMDREDAKDLVDACVA 141 Query: 129 AMNLDEK--QWPPRQAMWYI-NSQKDEGLR-PHHIQSYGNPVEQ---TWQKVYQAYQEAC 181 +D K ++P + I + + P + + E + + Y Sbjct: 142 EAEIDVKATRFPKADVLADIFSLGLNTQRSIPEVLAQEYDYFENLAPQIADIKERYILRK 201 Query: 182 DRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTG 241 +DF +LL +L P + +HY+ RF ILVDE+QDTN +Q I LLA Sbjct: 202 KSTNAMDFDDLLELWLKLLKEHPEVREHYQRRFQFILVDEYQDTNALQSELIDLLAARHH 261 Query: 242 KVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNN 301 VM+VGDD QSIY WRGA +NI +F + A ++E NYRST IL+ ANA I N Sbjct: 262 NVMVVGDDAQSIYAWRGANFQNIIKFPERYSEARVYKIETNYRSTPEILNLANAAISANV 321 Query: 302 GRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSR 361 + K+L G L ++A FV R+ ++ G + + A+LYRS+ + Sbjct: 322 KQFEKQLTPARKSGLKPVLVPCMTASEQASFVAQRMLELREEGVNMNQMAVLYRSHFHAL 381 Query: 362 VLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDR 421 L+ L + ++P+ I G+RFFE+ IKD +Y++L+ N D+ AF+R+V G+G + Sbjct: 382 ELQLELTRRNIPFSITSGIRFFEQAHIKDVAAYIKLVNNPRDELAFKRLVQLLP-GVGGK 440 Query: 422 TLDVVRQTSRDRQLTLWQACRELLQEKAL------------------------AGRAASA 457 D + + + + + ++ L + A A Sbjct: 441 GADKLWARFQSAFKVIPENLQADARDTLLPSETSTKADRNPVATALQASASAVPKKTAVA 500 Query: 458 LQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATR 517 +F+ I L E +++ G ++ + R++++E+L + Sbjct: 501 WAQFVATISQLETEPVRGKTDKMIRLIVEA-GYDEHLQENYA-NYRNRLDDIEQLALFAQ 558 Query: 518 QFSYNEEDEDLMPLQAFLSHAALEAG-----EGQADTWQDAVQLMTLHSAKGLEFPQVFI 572 QFS EE FL+ AL + + A+ + V+L T+H AKGLEF VFI Sbjct: 559 QFSTTEE---------FLAQLALLSNLEAETDEPANNDNEQVKLSTIHQAKGLEFDVVFI 609 Query: 573 VGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE--VYHRPS 630 + + +G+FPS SLD EEERRL YV +TRA +L L+Y R + G +PS Sbjct: 610 IMLCDGLFPSARSLDTAEGEEEERRLLYVAITRARNELYLSYPLIRMMPGGSGDAMQQPS 669 Query: 631 RFIGELPEECVEEVRLRATVS 651 RF+ ELP+E ++E L+ Sbjct: 670 RFLSELPKESLDEWNLKTINP 690 >UniRef50_Q1NRJ1 UvrD/REP helicase n=3 Tax=Deltaproteobacteria RepID=Q1NRJ1_9DELT Length = 775 Score = 650 bits (1679), Expect = 0.0, Method: Composition-based stats. Identities = 226/760 (29%), Positives = 345/760 (45%), Gaps = 67/760 (8%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 + LN QREAV AP +LV+AGAGSGKTR LVHR+AWL+ + P ++ +TFT KAA Sbjct: 32 EQLNSAQREAVCAPPGPILVIAGAGSGKTRTLVHRLAWLV-EQGTPPEQLLLLTFTRKAA 90 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM R G L+ S + GTFH A+ LLR + +F I+D D ++ L Sbjct: 91 QEMTARAGWLLDGSCRRVTGGTFHATANLLLRRYATRIGYQANFSIIDQSDAEGIINLLK 150 Query: 128 KAMNLDE--KQWPPRQAMWYI-NSQKDEGLRPHHI-QSYGNPVEQTWQKVY---QAYQEA 180 ++ L +++P R+ + I + + G + ++ + + + Q YQ+ Sbjct: 151 SSLGLGGAGRRFPSRRLILGILSKAVNVGSSVSDLVEAEHEHLAEFLDDILAINQHYQQF 210 Query: 181 CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT 240 GL+D+ +LLL L + + + +RF ILVDE+QDTN IQ +RLLA Sbjct: 211 KLDHGLMDYDDLLLNWRRLLRDDREVREELAQRFQAILVDEYQDTNPIQAEIVRLLAAQR 270 Query: 241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN 300 VM VGDD QSIY +RGA NI F + FPG +RLE+NYRS IL NA+I Sbjct: 271 RNVMAVGDDAQSIYSFRGADFRNIMEFPDHFPGTRVVRLEENYRSIPQILEVGNAIIAPA 330 Query: 301 NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQS 360 + KKL++ G + A NE ++ARFVV +IK + ++ A+L+RS S Sbjct: 331 PVKYPKKLFSRLEGGSRPLFHAARNESEQARFVVEKIKELRRE-LDASQIAVLFRSGFHS 389 Query: 361 RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD 420 LE L + + GG++ E IKD L++ R++ N D ++ R++ + IG Sbjct: 390 YKLELELTANGIDFEKRGGLKLTESAHIKDVLAHFRVLCNPADRLSWHRLLLLLDK-IGP 448 Query: 421 RTLDVVRQTS--------RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 +T + L+ +Q+ ++L+ + Sbjct: 449 KTAARIIDRLPLLEQVAGPGDGQRPLDGSLAALKAFPAGKAWGEGMQKLLQLLADIND-- 506 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 + ++V+ + + + + R +LE+L + + Sbjct: 507 PGLAPAELLEQVL--IYYQPLLRRLYPDDYPRRQRDLEQLRPLLAGYESMD--------- 555 Query: 533 AFLSHAALEAGEGQADTWQDA-VQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGR 591 FL+ AL+ + D + L T+HSAKGLE+ VF++ + EG FP+ ++ + Sbjct: 556 DFLAELALDPSSPEVDDDGGGRLVLSTVHSAKGLEWEAVFVIHLAEGKFPANQAVG-AAQ 614 Query: 592 LEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE-VYHRPSRFIGELPEECV--------- 641 EEERRL YV TRA + L L Y + ++ PS F+ LP E + Sbjct: 615 YEEERRLLYVAATRAKRWLYLVYPRQSTGADRRPLFCEPSPFLAPLPPELLRGSGSGGEA 674 Query: 642 ---------------------EEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAK 680 E R+ + + M + +G RVRH Sbjct: 675 AGRPDWPSAPPAGDDPWELAAENSRVGPGPPAGLPGSGQRSAMAGESAALTVGSRVRHPF 734 Query: 681 FGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 FG G IV G G ++V F G K L YARL SV Sbjct: 735 FGPGVIVKQRGGG---IVEVNFDRHGRKTLHLDYARLVSV 771 >UniRef50_B2A098 UvrD/REP helicase n=3 Tax=Verrucomicrobia RepID=B2A098_OPITP Length = 668 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 216/660 (32%), Positives = 328/660 (49%), Gaps = 34/660 (5%) Query: 8 DSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAA 67 LND+Q AV A LLVLAGAGSGKTR L +R+A+L+ P I+ +TFTNKAA Sbjct: 20 AQLNDEQFAAVTAEPGPLLVLAGAGSGKTRTLTYRVAYLL-SRGVKPGEILLLTFTNKAA 78 Query: 68 AEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLI 127 EM HR+ L G W GTFH L HR LR + LP++F ILD+++ LLK+ + Sbjct: 79 KEMLHRVQDLTGIEPQRFWGGTFHSLGHRALRIYGDAIGLPKNFTILDADESESLLKQAV 138 Query: 128 KAMN----LDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQK----VYQAYQE 179 + + D+ P ++ ++ + P AY Sbjct: 139 EHEDKLFFKDKTNPRPGPLFDVLSLARNTQQPLADTVAKNFPQYTEIAHRFPAFATAYAT 198 Query: 180 ACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGD 239 +VD+ +LL EL + P + Q++ RF ++LVDE+QDTN +Q + LA Sbjct: 199 RKREQNVVDYDDLLEFWLELLIKAPEVAQYFAHRFRHVLVDEYQDTNTLQAQIVDRLAA- 257 Query: 240 TGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL-IE 298 VM VGDD Q IY WRGA ENI F + PG R+E NYRST IL+ AN + + Sbjct: 258 HHCVMAVGDDAQCIYSWRGANFENIMTFPDRHPGTAIHRIETNYRSTPEILNFANGVLLA 317 Query: 299 NNNGR-LGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD-NGGALAECAILYRS 356 GR K+L + + A ++ ++A F++ RI+ + G +L E AILYRS Sbjct: 318 QPKGRHFDKELRAARGHAQKPFVVQAMDDREQAEFILKRIRALVEDEGVSLNEVAILYRS 377 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + + ++ AL +A +PY+I G++FFERQ I+D ++ LR + N D A++R+ + Sbjct: 378 HFLALEVQLALSRAGVPYQITSGVKFFERQHIRDLVALLRFVYNGADTQAWQRIAVLLPK 437 Query: 417 GIGDRTLDVVRQTSRDR----QLTLWQACRELLQEKALAGRAASALQRFMELIDALAQET 472 IG++ + + D Q L +A A F + +A++ Sbjct: 438 -IGEKGAQKIYAAAVDHARLTQKNLLDVLNTDDVRSKVAKDARDDWASFCASLSEVAEKM 496 Query: 473 ADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQ 532 I+ G Y + + R++ L+ LV ++F + Sbjct: 497 QHARPADAVATAIE--GWYGDYLKGQYADYLDRLDELKALVGFAQRFEETQ--------- 545 Query: 533 AFLSHAAL---EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG 589 FL+ L E + D +AV+L T+H AKGLE+ VF++G+ +G FP + S++ Sbjct: 546 DFLAQIVLLNSETSDRHVDPEAEAVRLTTVHQAKGLEYDVVFVIGLADGQFPGRRSIES- 604 Query: 590 GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYG-KEVYHRPSRFIGELPEECVEEVRLRA 648 G +EEERRL YV VTRA +L L+Y + G + PSRF+ E+P + E +R++ Sbjct: 605 GDVEEERRLFYVAVTRARNELYLSYPKVATRGGPGGMLLTPSRFLLEVPTDLYEPLRIKR 664 >UniRef50_A7HBX8 UvrD/REP helicase n=7 Tax=Cystobacterineae RepID=A7HBX8_ANADF Length = 745 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 209/694 (30%), Positives = 325/694 (46%), Gaps = 34/694 (4%) Query: 10 LNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAE 69 LND+Q V A +LV+AGAGSGKTR L R+A L++ SP SI+ +TFTNKAA E Sbjct: 36 LNDQQIAVVEAGDGPILVVAGAGSGKTRTLTWRVARLLAE-GASPESILLLTFTNKAAQE 94 Query: 70 MRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKA 129 M R+G++ + GTFH +AH+LLR H + + + ILD ED ++ I Sbjct: 95 MLRRVGEVCRLDTRQITGGTFHHVAHQLLREHGGELGYRKGYSILDREDSSDVMSAAIAD 154 Query: 130 MNL--DEKQWPPRQAM-WYINSQKDEGLRPHHIQSYGNP----VEQTWQKVYQAYQEACD 182 L +++P + ++ + + + P + +V + Y E Sbjct: 155 CGLAVGARRFPKADVLIDLVSMAVNTQTPLADVLADRRPQFVPLTDDVLRVARRYAERKH 214 Query: 183 RAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGK 242 +DF +LLL L + + + R+ ++LVDE+QDTN +Q + L+AG+ Sbjct: 215 ELNAMDFDDLLLNWKILLAEREAVRRAVAGRYRHVLVDEYQDTNRLQGDVVDLVAGEHRN 274 Query: 243 VMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNG 302 + +VGDD QSIY +RGA NI F +P A L NYRST IL ANA I N Sbjct: 275 LCVVGDDAQSIYAFRGAHFANILEFEKRYPDARRYDLTVNYRSTPQILGLANASIAANVR 334 Query: 303 RLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRV 362 + K+L + DG ++ +A FV R+ +D G L E A+LYR++ + Sbjct: 335 QFEKELTSVRPDGTLPAVVPCREVQQQAAFVAQRVLELRDEGIPLPEIAVLYRAHHHAME 394 Query: 363 LEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRT 422 ++ L + +P+ + G+RFFE +KD L++LR + N D+ A +R + T G+G T Sbjct: 395 IQFELARRGIPFVVRSGVRFFEAAHVKDVLAHLRFVRNPGDELALKRCL-KITPGVGTAT 453 Query: 423 LDVVRQTS---RDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHV 479 + V R R + + + ++ EL+ AL+++ Sbjct: 454 AEGVWNAFLARRQRGAGTVDELLAPDVASHVPPKGRAGYRKLAELLRALSRKPTAELPGE 513 Query: 480 QTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAA 539 ++VI+ G Y + + +R+E+L +L R + E FL+ + Sbjct: 514 AIEKVIE--GGYEDYLRAEFLNADSRVEDLRQLAEYARGYEDTE---------TFLAEIS 562 Query: 540 LEAG-----EGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEE 594 L + + + L ++H AKGLE+ VF+V + +G FPS +L + EE Sbjct: 563 LLTELTAETVSEGGDPDEKMVLSSVHQAKGLEWRAVFVVWLSDGRFPSAQALKDRDGEEE 622 Query: 595 ERRLAYVGVTRAMQKLTLTYAETRRLYGKEV-YHRPSRFIGELP--EECVEEVRLRATVS 651 ERRL YV TRA +L LTY +E + SRF+ ELP E E +L + Sbjct: 623 ERRLFYVACTRAKDELYLTYPILAAPRDRERVVMKASRFVEELPGEPELFERWQLDEPGA 682 Query: 652 RPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGT 685 + P + RV A FG T Sbjct: 683 AAPALGAAPAPSGQLPPRDA---RVVPALFGAPT 713 >UniRef50_Q98PF5 ATP-DEPENDENT HELICASE PCRA n=1 Tax=Mycoplasma pulmonis RepID=Q98PF5_MYCPU Length = 741 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 223/738 (30%), Positives = 368/738 (49%), Gaps = 31/738 (4%) Query: 1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV 60 M LL LN Q++AV L ++AGAG+GKT+VL ++++L+ VE +P+ I+AV Sbjct: 15 MIEHKLLADLNIAQKQAVLVMPKTLQIVAGAGTGKTKVLTRKMSYLIEVEQVNPFKILAV 74 Query: 61 TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL 120 TFTNKAA EMR R + + + + TF+ L + +L+ + F ILD +D Sbjct: 75 TFTNKAAKEMRERASAHINENTKNLQIYTFYNLCNLILKEDIHHLGYSKTFSILDVKDID 134 Query: 121 RLLKRLIKAMNLDEKQWPPRQAMWYINSQK-DEGLRPHHIQSYGNPVEQTWQK---VYQA 176 +L L +LD R Y +K + + I E +K VYQ+ Sbjct: 135 NILSLLYAKHDLDNLDLAYRTMRAYFKKRKLSDFVTNWEIFDRKEIDEDIMEKMDLVYQS 194 Query: 177 YQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLL 236 Y E VDF +LLL + L+ P + + + +F +LVDEFQDT+ +QY ++++ Sbjct: 195 YIEYTKENNFVDFEDLLLLVNHLFETNPKVRKKWESKFEYVLVDEFQDTSPLQYEILKVI 254 Query: 237 AGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANAL 296 A + IVGD DQ+I+ W GA + F DFP + I+LEQNYRST IL AAN L Sbjct: 255 A-KNAYLTIVGDPDQTIFWWHGADINIFLNFEKDFPESMKIKLEQNYRSTKKILDAANKL 313 Query: 297 IENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRS 356 I N RL K L+T+ +GE I AFN EAR+VV +I + L ILYRS Sbjct: 314 IAKNKRRLTKNLFTEKEEGEAIEFNHAFNIDAEARWVVTKINMLKKQKVQLKNIVILYRS 373 Query: 357 NAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTR 416 + SR LE+ L++ ++ ++I G +FFE++EIK+ + +L+ I + + AF + R Sbjct: 374 SHVSRALEQQLVKENINHQIVNGTKFFEKKEIKNLIYFLKTIYS-ANTLAFYNTLLFFVR 432 Query: 417 GIGDRTLDVVRQTSRDRQLTLWQACRELL--QEKALAGRAASA----LQRFMELIDALAQ 470 + + LD V + +L+L++ + + L+ + L+ ++ L Sbjct: 433 SLAKKDLDEVLHQAAAAKLSLYKYIITRIKTENLGLSAKTRKETISLLKTIVKFKKLLKN 492 Query: 471 ETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMP 530 E + D +K+ + ++ ++ +N+ E +T +++ +E+ Sbjct: 493 EKHEANYSWIFDAFLKEVKFYDLINYDRDDE-NAIQDNVYEFLTLLQKW---QEENPSSE 548 Query: 531 LQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEG- 589 L F AL + + + LMT+H+AKGLEF VFI+G+ E + PS +L Sbjct: 549 LSKFFEDIALYSNRIDESAGNNFISLMTIHNAKGLEFDYVFIIGLNENILPSAKALYSKD 608 Query: 590 -----GRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEV 644 +LEEERR+AYV +TRA K+ ++ A Y KE + SRF+ E+ + V Sbjct: 609 GSINYDKLEEERRIAYVALTRAKTKVFISDARGIDPYSKE-PKKTSRFLTEMGISLEDHV 667 Query: 645 RLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQG 704 + +++ + G +G + H+ FGEG ++ ++ + S + V F+ Sbjct: 668 QEINSITNITQEIQSG------HHSLIVGDFISHSSFGEGELLEIQDNDFESSIVVRFKN 721 Query: 705 Q--GIKWLVAAYARLESV 720 + GI+ + + + + Sbjct: 722 KVVGIRTISKTHESIRRI 739 >UniRef50_O31626 Putative ATP-dependent DNA helicase yjcD n=3 Tax=Bacillus RepID=YJCD_BACSU Length = 759 Score = 643 bits (1659), Expect = 0.0, Method: Composition-based stats. Identities = 199/640 (31%), Positives = 316/640 (49%), Gaps = 37/640 (5%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN Q +AV LLVLAGAGSGKTRVL R A ++ P +++ VTFT KA A Sbjct: 135 GLNTDQLKAVTETEGPLLVLAGAGSGKTRVLTARAAHMIEHLGIPPENMLLVTFTTKAVA 194 Query: 69 EMRHRIGQ---LMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILD-SEDQLRLLK 124 EM+ R+ L + GTFH L +++L +H ++ +L + + +K Sbjct: 195 EMKERMANQYGLQPAKVRRIVTGTFHSLFYKIL--YHSNSAKWNGEHLLKMEWQREQYIK 252 Query: 125 RLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRA 184 + + +DEK+ P QA+ I K+ + P+ + E+ ++Y+ Y+ Sbjct: 253 KALYEEGIDEKESPVDQALQQIGFWKNTYV-PNERIPLKDEWEKQVYRLYEHYERQKKEH 311 Query: 185 GLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVM 244 DF ++ +EL++ +P +L+ Y+ RFT IL+DEFQD N +QY +++LA + Sbjct: 312 SQFDFDDMASACYELFIERPDLLEQYQSRFTYILIDEFQDINPVQYKIMQMLASPEQNLC 371 Query: 245 IVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRL 304 VGDDDQSIY +RG+ I F D+PGA+TI L NYRST I+S+A+ +++ N R Sbjct: 372 CVGDDDQSIYAFRGSNPSFILDFQKDYPGAKTIYLTANYRSTHPIVSSADIVVKKNKNRY 431 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K L D + L+ ++E +EA VV+ IK NG + + A+LYR+N+ R + Sbjct: 432 AKTLEAARDDIQVPVLFYPYDEEEEATMVVSDIKEKIQNGASPEDFAVLYRTNSGGRAIY 491 Query: 365 EALLQASMPYRI-YGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTL 423 E L Q+S+PY G F+ R+ ++ L+YL N +D A + ++ P + L Sbjct: 492 ERLHQSSIPYTADRGVQSFYSRRIVRQILAYLYASQNEDDTEAIKHLL--PALFLKQSAL 549 Query: 424 DVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDR 483 + ++ S T+ +A +L L +++ + +L M Sbjct: 550 NTLKALSITEDCTMIKALAKL---PDLKPFQLDKIKKIVPFFASLR----TMKPVEAITF 602 Query: 484 VIKDSGLRTMYEQEKGE--KGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALE 541 G ++ E K + ++L ++ ++F + FL+H Sbjct: 603 AEGKMGFSEYLKKRGNEGNKLEKGSDDLRDIKVVAKKF---------KTIPDFLAHVDHM 653 Query: 542 AGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLD-----EGGRLEEER 596 + T + VQLMT+H +KGLEF V+++G +G P SL+ + LEEER Sbjct: 654 RAAEKNRTDEHGVQLMTIHRSKGLEFKTVYVLGTVDGSIPHDFSLETARKGDEAALEEER 713 Query: 597 RLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEL 636 RL YV +TRA Q L L+ RR GK SRF+ L Sbjct: 714 RLLYVAMTRAKQHLYLSCPANRR--GKTANR--SRFLYPL 749 >UniRef50_O66983 ATP-dependent DNA helicase REP n=3 Tax=Aquificaceae RepID=O66983_AQUAE Length = 669 Score = 642 bits (1657), Expect = 0.0, Method: Composition-based stats. Identities = 216/716 (30%), Positives = 363/716 (50%), Gaps = 59/716 (8%) Query: 9 SLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAA 68 LN +Q EAV S LLV+AGAGSGKT+ L H++ +L+ + PY I+ +TFTNKAA Sbjct: 2 KLNTQQEEAVRHFGSPLLVVAGAGSGKTKTLTHKVEYLIKEKGLKPYEILCITFTNKAAK 61 Query: 69 EMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIK 128 E++ RI G W GTFH +A ++L+ +P+DF I D +D ++K ++K Sbjct: 62 EIKERIKNTFGLELE--WSGTFHSVALKILKKDGEKIGIPKDFSIADEKDTTLIVKEILK 119 Query: 129 AMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVD 188 L ++ I+ K+ P + + YQ L+D Sbjct: 120 KYGLKKEPEEV---KEKISKVKENFEEPEAW----------LGVLLEEYQRVLRENKLLD 166 Query: 189 FAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDTGKVMIVGD 248 F++L+ + L L + + YR F I+VDE+QDTNNIQY ++LLA + +GD Sbjct: 167 FSDLMRELYNLLLVD-EVREKYRNTFKYIMVDEYQDTNNIQYEILKLLA--NKNICAIGD 223 Query: 249 DDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN----NGRL 304 +Q IY WR A+ +NI RF+ DF + I+LE NYRS IL ANA++E + + Sbjct: 224 PNQCIYEWRDARPDNILRFIEDF-NPKIIKLELNYRSREPILRVANAVLEASTLEWKDLI 282 Query: 305 GKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAECAILYRSNAQSRVLE 364 K L +G+ + +E +EA ++ +IK L + A+L R + V E Sbjct: 283 PK-LRGVRGEGQKPYVRRFQDEEEEALWISRKIKELAGE-YELKDIAVLVRVGYITDVFE 340 Query: 365 EALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGDRTLD 424 +A +PY++ G ++F+ER EIK+ ++ LRLI N +D+ AF+R+ +G GD++ + Sbjct: 341 RTFFKAGIPYKVVGTIKFYERIEIKNLIALLRLIYNPSDEVAFKRLTEFFVKGFGDKSFE 400 Query: 425 VVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQTDRV 484 VV++ + ++A +E K L AA + F++ + L + H + Sbjct: 401 VVKKNFKGN---WFKALKE--SLKKLPKNAAISAYEFLKAVVPLYKNPEKY--HEGLEAF 453 Query: 485 IKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGE 544 ++ + +++ + + RIEN++E +++ + F L+ L+ L + Sbjct: 454 VEKIDYYELLKEKFKKDYEERIENVKEFLSSLKDF-----YAKAYTLEDLLAEITLTS-- 506 Query: 545 GQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVT 604 + + ++AV+++T+HSAKGLEFP VF+ +EEG+ P S + LEEERRL YV +T Sbjct: 507 -EEEEEENAVKILTIHSAKGLEFPVVFLPRLEEGILPHHRSQESERELEEERRLFYVAIT 565 Query: 605 RAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMV 664 RA L ++Y K+ +PSRF+ ++P+ ++ + ++ Sbjct: 566 RAKDLLFMSYT-------KKENRKPSRFLSDIPKHLLDLSAFKKKKKVAYEENLRPNRLI 618 Query: 665 ENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLESV 720 K G +V H FG+G ++ +E R +V F+ K + ++ LE + Sbjct: 619 ------KKGDKVIHRVFGKGVVLRIEEE----RAKVRFENGEEKVIHTSF--LEPL 662 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.172 0.579 Lambda K H 0.267 0.0527 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,369,302,587 Number of Sequences: 3077464 Number of extensions: 308674695 Number of successful extensions: 891179 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 4435 Number of HSP's successfully gapped in prelim test: 2958 Number of HSP's that attempted gapping in prelim test: 846122 Number of HSP's gapped (non-prelim): 21342 length of query: 720 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 584 effective length of database: 621,861,252 effective search space: 363166971168 effective search space used: 363166971168 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 98 (42.0 bits)