7 d1pjra1 Probab=100.00  E-value=0  Score=335.69  Aligned_columns=313  Identities=43%

Q ss_pred             CCHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHHHHCCC
Q ss_conf             99689774369899999958899789994899757799999999999808999777789736989999999999985134
Q batch____         1 MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGT   80 (720)
Q Consensus         1 ~~~~~~~~~Ln~~Q~~av~~~~~~~lV~a~aGSGKT~~l~~ria~Li~~~~~~~~~IL~ltft~~Aa~em~~Ri~~~l~~   80 (720)
                      |..+.|+++||++|++||.+..+|++|+||||||||+++++|+++|+.+++.++++||++||||.|++++.+|+.+..+.
T Consensus         3 ~~~~~i~~~L~~~Q~~~I~~~~~~~lI~G~pGTGKT~~l~~~i~~ll~~~~~~~~~iL~lt~s~~a~~~~~~r~~~~~~~   82 (315)
T d1pjra1           3 FLSEQLLAHLNKEQQEAVRTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGG   82 (315)
T ss_dssp             HHHHHHHTTSCHHHHHHHHCCSSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf             14789884128999999966899789983899878799999999999808999767778716989999898878875113


Q ss_pred             CCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             40064898507999999998488739898972879899999999999875856112899999999999976179978976
Q batch____        81 SQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ  160 (720)
Q Consensus        81 ~~~~~~i~Tfhs~~~~ilr~~~~~~~~~~~~~i~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~k~~~~~~~~~~  160 (720)
                      ....+++.|||+||..+.+.+....+....+.+.+..+...+.+.....................+...++....+....
T Consensus        83 ~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (315)
T d1pjra1          83 AAEDVWISTFHSMCVRILRRDIDRIGINRNFSILDPTDQLSVMKTILKEKNIDPKKFEPRTILGTISAAKNELLPPEQFA  162 (315)
T ss_dssp             GGTTSEEEEHHHHHHHHHHHHGGGGTCCTTCEECCHHHHHHHHHHHHHTTSCTTTTCCHHHHHHHHHHHHHTTCCHHHHT
T ss_pred             CCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
T ss_conf             34663021299999999776478618766643269589999999998742777222678999999999986127966755


Q ss_pred             HCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCEECHHHHCCCCHHHHHHHHHHHCCC
Q ss_conf             40451899999999999999876589997899999999986096889999862861300222039989999999860579
Q batch____       161 SYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT  240 (720)
Q Consensus       161 ~~~~~~~~~~~~i~~~y~~~l~~~~~~d~~dl~~~~~~ll~~~~~~~~~~~~~~~~i~vDE~QD~~~~q~~ll~~L~~~~  240 (720)
                      ....  .......+..|..........++.+.+..+..++......++.+..+|+++++||+||+++.|+.++..|+..+
T Consensus       163 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vDe~Qd~~~~q~~ll~~l~~~~  240 (315)
T d1pjra1         163 KRYY--EKVVSDVYQEYQQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQYIHIDEYQDTNRAQYTLVKKLAERF  240 (315)
T ss_dssp             TCCH--HHHHHHHHHHHHHHHHHTTEECTTHHHHHHHHHHHHCHHHHHHHHHHCSEEEESSGGGCCHHHHHHHHHHHTTT
T ss_pred             HHHH--HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHCCCHHHHHHHHHHHCCC
T ss_conf             5454--43333211235677653045663689999999963289999851024835620135409989999999972469


Q ss_pred             CEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             869998144327211126898999999985589759983755578989999877874204110012455545667
Q batch____       241 GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADG  315 (720)
Q Consensus       241 ~~l~~vGD~~Q~iy~~rga~~~~~~~f~~~~~~~~~~~L~~nyRs~~~I~~~an~~i~~~~~~~~~~~~~~~~~~  315 (720)
                      .+++++||++|.||+|+|++...+..+.+.+++.+.+.|..||||+++|+.++|.++.+|..+..+.+++.++.|
T Consensus       241 ~~l~l~GD~~Q~i~~~~~~~~~~~~~l~~~~~~~~~~~L~~nyR~~~~I~~~~n~l~~~n~~~~~k~i~~~~~~~  315 (315)
T d1pjra1         241 QNICAVGDADQSIYRWRGADIQNILSFERDYPNAKVILLEQNYRSTKRILQAANEVIEHNVNRKPKRIWTENPEG  315 (315)
T ss_dssp             CCEEEEECGGGCCCGGGTCCTHHHHTHHHHSTTCEEEEECBCSSSCHHHHHHHHHHHTTCSSCCCCCCBCSSCCC
T ss_pred             CEEEEEECCCCCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCC
T ss_conf             869998033318200049998999999984489669996865588789999999999724000685063347999