BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (149 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammapro... 229 3e-59 UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteoba... 214 5e-55 UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteob... 195 3e-49 UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaprot... 175 3e-43 UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus... 175 5e-43 UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteoba... 164 6e-40 UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteri... 160 1e-38 UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteoba... 160 2e-38 UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholde... 159 3e-38 UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=En... 155 3e-37 UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria ... 155 3e-37 UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria... 155 5e-37 UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=... 150 1e-35 UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptoc... 147 8e-35 UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasm... 144 9e-34 UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria... 143 2e-33 UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 142 3e-33 UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C... 142 3e-33 UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chlorofle... 141 6e-33 UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopire... 141 7e-33 UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepI... 140 1e-32 UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteri... 140 2e-32 UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 139 3e-32 UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema... 138 4e-32 UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocycl... 137 8e-32 UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermans... 137 9e-32 UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteoba... 135 3e-31 UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria... 135 3e-31 UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria... 135 5e-31 UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomy... 135 5e-31 UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria... 135 5e-31 UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=... 134 1e-30 UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria ... 133 2e-30 UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostri... 133 2e-30 UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinob... 132 4e-30 UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 132 5e-30 UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicut... 132 5e-30 UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostrid... 131 5e-30 UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinom... 131 8e-30 UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria... 130 9e-30 UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria ... 130 2e-29 UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomyc... 129 4e-29 UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidob... 128 5e-29 UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococc... 127 1e-28 UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria... 126 2e-28 UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacteri... 125 5e-28 UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacte... 125 6e-28 UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 124 7e-28 UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria ... 124 7e-28 UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria... 124 9e-28 UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae... 124 1e-27 UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neoricket... 122 5e-27 UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisp... 121 7e-27 UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria... 120 9e-27 UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseri... 120 2e-26 UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogeno... 119 3e-26 UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria ... 119 4e-26 UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ru... 119 4e-26 UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae... 118 6e-26 UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum te... 117 8e-26 UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium f... 115 3e-25 UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimo... 115 4e-25 UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomi... 114 8e-25 UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae... 111 7e-24 UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenel... 110 1e-23 UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobac... 109 3e-23 UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphapr... 108 7e-23 UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydi... 107 1e-22 UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminoc... 105 6e-22 UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candida... 99 5e-20 UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesioc... 94 1e-18 UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470... 94 1e-18 UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiotherm... 94 2e-18 UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=At... 91 1e-17 UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteri... 89 4e-17 UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 ... 88 1e-16 UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia... 85 6e-16 UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia ... 84 2e-15 UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochra... 82 4e-15 UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanic... 80 2e-14 UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rh... 67 2e-10 UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collins... 66 4e-10 UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent t... 62 4e-09 UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydroge... 57 1e-07 UniRef50_UPI0000393417 COG1327: Predicted transcriptional regula... 55 9e-07 UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsi... 43 0.003 UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylo... 39 0.035 >UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammaproteobacteria RepID=NRDR_SHEFN Length = 149 Score = 229 bits (583), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 108/148 (72%), Positives = 126/148 (85%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC A DTKVIDSRLV +G VRRRR+C C+ERFTTFE AELVMPRV+K + R+P Sbjct: 1 MHCPFCSATDTKVIDSRLVADGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR GMLRA+EKRPVS D++E A+ IKS LRATGEREV S+MIGNL+MEQL LD Sbjct: 61 FDEEKLRGGMLRAVEKRPVSIDEIEQALTKIKSTLRATGEREVNSEMIGNLMMEQLMSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYR+FED+ +FGE IA+L+ Sbjct: 121 KVAYIRFASVYRAFEDVSQFGEAIAKLQ 148 >UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteobacteria RepID=NRDR_MARAV Length = 172 Score = 214 bits (546), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 101/147 (68%), Positives = 122/147 (82%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVIDSRLV EG VRRRR+CL C ERFTTFE AELVMPRVVK + R+P Sbjct: 1 MHCPFCGEADTKVIDSRLVAEGDQVRRRRECLSCRERFTTFETAELVMPRVVKQDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR+G+++ALEKRPVS ++++ A+N IK +LR+TGEREV S +G VM +L++LD Sbjct: 61 FDEEKLRAGIMKALEKRPVSIEEIDAALNRIKYRLRSTGEREVKSMQLGEEVMTELRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVYRSF+DI EF EEI RL Sbjct: 121 KVAYVRFASVYRSFQDINEFKEEIERL 147 >UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteobacteria RepID=NRDR_THISH Length = 172 Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 98/148 (66%), Positives = 114/148 (77%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT+VIDSRL GEG VRRRR+CL C+ERFTT+E AEL MPRVVK + REP Sbjct: 1 MRCPFCGAPDTRVIDSRLAGEGDQVRRRRECLSCSERFTTYENAELNMPRVVKRDGSREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNE+KL+SGM ALEKR VS+D VE A+ IK +L GEREV S+ IG VME+L+ LD Sbjct: 61 FNEDKLKSGMTHALEKRAVSTDKVEEAVARIKRKLLGQGEREVDSRRIGEWVMEELRNLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVY SF D++ F E I RLE Sbjct: 121 QVAYIRFASVYLSFADVQAFREVIERLE 148 >UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaproteobacteria RepID=NRDR_PSYWF Length = 153 Score = 175 bits (444), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 82/147 (55%), Positives = 110/147 (74%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A DTKVIDSRL EG+ VRRRRQC C ERFTTFEV E+VMPR++KSN EP Sbjct: 1 MQCPYCNADDTKVIDSRLAAEGAQVRRRRQCNQCQERFTTFEVVEVVMPRIIKSNGRIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +KL+ + L+KRPV+ D+ E I+ I+ ++R GERE+ SK +G +VM +LK+LD Sbjct: 61 YDSQKLKRSIQLPLQKRPVTLDEQEAMISRIEKRIRQLGEREISSKGLGEVVMSELKELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR F+DI+ F +E+ + Sbjct: 121 DVAYVRFASVYRDFQDIEAFRQELQNI 147 >UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1W9_HALNC Length = 175 Score = 175 bits (443), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 80/140 (57%), Positives = 110/140 (78%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C +T VIDSR+V G S+RRRR+CL C +RFTT+E A++ +PR+VKSN R+ Sbjct: 1 MQCIACGHPNTHVIDSRMVEGGVSIRRRRECLACKQRFTTYETADIRLPRIVKSNGARQS 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNEEKLRSGM+RALEKRPV++ ++ I+ IK L+ATG +EV ++ IG+LVM+ L++LD Sbjct: 61 FNEEKLRSGMMRALEKRPVATSRIDDEIDQIKKSLQATGAKEVTARKIGDLVMQALRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEF 140 +VAYIRFASVY SF++++ F Sbjct: 121 QVAYIRFASVYLSFDNVEAF 140 >UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteobacteria RepID=NRDR_XYLFM Length = 181 Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 77/148 (52%), Positives = 108/148 (72%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+C FC DT+VIDSR+ +G+++RRRR+C C ERF+T E EL +P ++K + RE Sbjct: 1 MYCLFCQHTDTRVIDSRVSEDGATIRRRRECEACGERFSTLETIELKLPVIIKKDGGREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+ RAL+KRPV+ + +EMA+ + +LR GEREVPS ++G VM +L+KLD Sbjct: 61 FDGRKLRTSFDRALQKRPVAEERIEMAMRAVIHRLRMAGEREVPSIVVGECVMAELRKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 V Y+RFASVYRSF+D+ +F EEI +LE Sbjct: 121 HVGYVRFASVYRSFQDVADFREEIEKLE 148 >UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteria RepID=NRDR_MYXXD Length = 168 Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 78/147 (53%), Positives = 105/147 (71%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + KVIDSR EGS +RRRR+CL C RFTT+E E + P +VK + RE Sbjct: 1 MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ +G+ +A EKRPVS+D +E + I+ QL+ GE+EVPS +IG +M +L++LD Sbjct: 61 FDREKIVNGLKKACEKRPVSADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYRSF DI EF +E+ L Sbjct: 121 EVAYVRFASVYRSFRDIAEFMDELKAL 147 >UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteobacteria RepID=NRDR_NITEC Length = 160 Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/144 (54%), Positives = 97/144 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT V+DSR+ EGS +RRRRQC C +RFTT+E E+ P+++K R Sbjct: 1 MRCPFCGAEDTSVVDSRVSEEGSRIRRRRQCTACGKRFTTYETVEVRFPQIIKQGGNRVE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EKL + RAL KRPV V+ AI I +L G +E+ S+ IG VM++L KLD Sbjct: 61 FNREKLYTSFARALHKRPVPVGQVDAAIERILQKLLGGGAQEISSRTIGEWVMQELYKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 KVAYIRFASVYRSFED+ +F E I Sbjct: 121 KVAYIRFASVYRSFEDVGDFQEVI 144 >UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholderiales Genera incertae sedis RepID=NRDR_METPP Length = 147 Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 78/144 (54%), Positives = 100/144 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V ++R EG +RRRR+C C++RFTT+E AEL MP +VK + R Sbjct: 1 MRCPFCGHEDTQVAETRESDEGDVIRRRRRCPSCDKRFTTYERAELAMPAIVKKDGSRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+R+ M+ AL KRPVS D VE A+ I+ ++ AT EVPS IG +VM +LKKLD Sbjct: 61 FDRSKIRASMMLALRKRPVSIDQVEAALGRIEEKMLATAANEVPSAKIGEMVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 KVAY+RFASVYRSFE + EF I Sbjct: 121 KVAYVRFASVYRSFEGVDEFSRLI 144 >UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698138 Length = 122 Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 72/116 (62%), Positives = 94/116 (81%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSRL G+G +RRRRQC C ERFTT+E AEL MP+VVK + R PF+E+KLR+GM R Sbjct: 1 MVDSRLSGDGDQIRRRRQCSTCKERFTTYETAELNMPQVVKQDGSRVPFDEDKLRAGMER 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFA 128 ALEKRPVS++ V+ AI+HI +L GERE+PS IG+LVM++LK+LD+VAY+RFA Sbjct: 61 ALEKRPVSAERVDAAISHITRKLTTKGEREIPSLQIGDLVMDELKRLDQVAYVRFA 116 >UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria RepID=NRDR_GEOUR Length = 150 Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 73/147 (49%), Positives = 105/147 (71%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D+KV+DSR GS++RRRR+C C +RFTT E E ++P V+K + REP Sbjct: 1 MKCPFCAFADSKVVDSRPDKGGSTIRRRRECESCGKRFTTHERVEEILPLVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ +A EKRPVS + +E ++ ++ Q++ +GE+E+PSK +G VM +L +D Sbjct: 61 FDRMKLVAGIQKACEKRPVSVETIERLVDRLEIQMQESGEKEIPSKSLGEWVMAELHSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYRSF+DI EF E+ L Sbjct: 121 QVAYVRFASVYRSFKDITEFMSELQDL 147 >UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria RepID=NRDR_FERNB Length = 153 Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 74/149 (49%), Positives = 109/149 (73%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+DSR + EG ++RRRR+C C+ RFTT+E E V+K + RE Sbjct: 1 MRCPFCGYEDTRVLDSRELSEGRAIRRRRECPQCHARFTTYERYETGPITVIKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G+L+A EKRP++ DD+E +++I SQL+ +G EVPS++IG LVME+L+K+D Sbjct: 61 FDRKKILNGLLKAFEKRPITVDDMERIVDNIVSQLQKSGTLEVPSELIGKLVMEELRKVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F +I +F E I L + Sbjct: 121 QVAYVRFASVYKDFREIDQFIEVIKELRN 149 >UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=C9R8L5_AMMDK Length = 163 Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 75/147 (51%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+D+R EG+++RRRR+C C RFTTFE E + V+K + RE Sbjct: 1 MRCPFCHFADTRVVDTRSANEGTAIRRRRECPRCGRRFTTFERVEELPLVVIKKDGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G LRA KRPV +D+E ++ ++ +LR E E+PS +IG LVME+LK+LD Sbjct: 61 FDRAKILGGCLRACHKRPVRREDLENLVDEVERELRNRLEPEIPSYVIGELVMEKLKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F D +F EEI RL Sbjct: 121 EVAYVRFASVYREFRDSYDFKEEIERL 147 >UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptococcus RepID=NRDR_STRP2 Length = 157 Score = 147 bits (372), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 69/140 (49%), Positives = 99/140 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A + VIDSR EG+++RRRR+C C RFTT+E E VVK + RE Sbjct: 1 MRCPKCGATKSSVIDSRQAEEGNTIRRRRECDECQHRFTTYERVEERTLVVVKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++R+ +KRPVSSD++ M +N I+ +LR E E+ S+ IG+LVME+L +LD Sbjct: 61 FSRDKIFNGIIRSAQKRPVSSDEINMVVNRIEQKLRGRNENEIQSEDIGSLVMEELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEF 140 ++ Y+RFASVYRSF+D+ E Sbjct: 121 EITYVRFASVYRSFKDVSEL 140 >UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasmataceae RepID=NRDR_EHRCJ Length = 153 Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 71/147 (48%), Positives = 99/147 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC ++T+V DSR + + +RRRR CLVCN RFTT E L V+K N EP Sbjct: 1 MKCPFCNNINTQVKDSRAIEDDILIRRRRICLVCNSRFTTIEKLLLRSFMVIKKNGETEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++KL S +L A +KRPVS + + + +N+I +L E VP+ +IG +VM+ L KLD Sbjct: 61 FNKQKLLSSILIATKKRPVSHEGINVMVNNIFYELEGKKENAVPTDVIGKMVMDNLFKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVY +F++I +F IA++ Sbjct: 121 KVAYVRFASVYMNFKNINDFSNIIAKI 147 >UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_RUBXD Length = 156 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 67/147 (45%), Positives = 103/147 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKVIDSRL ++RRRR+CL C +RFTT+E E + V+K + REP Sbjct: 1 MQCPYCDHEDTKVIDSRLSEAKDAIRRRRECLACGKRFTTYERREPLRLMVLKRDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ +A K+ V+ + +++ ++ I+++LR EV S+ IG++V+ +L++LD Sbjct: 61 FDREKLRAGLEKACAKQRVTGEQIDLIVDQIEAELRERRRHEVTSRRIGDMVLARLRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR + D+ +F E+ RL Sbjct: 121 MVAYLRFASVYRQYTDVDQFRSELLRL 147 >UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_DEHSC Length = 175 Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 72/147 (48%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP+C D+KVIDSR V +G VRRRR+C+VC +RFTT+E + VVK + RE Sbjct: 1 MNCPYCSHPDSKVIDSRDVDDG--VRRRRECVVCGQRFTTYERFQPAGLFVVKKDQRREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN+EKL SG+ RA EKRP+ + V+ I+++L G+ E+PS ++G++VME+LK LD Sbjct: 59 FNKEKLLSGLRRACEKRPLPAGAVDKVAGDIEAELYNMGKAEIPSTLLGDMVMERLKMLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +AY+RFASVYR F DI + + + L Sbjct: 119 NIAYVRFASVYREFTDITQLKKVVDNL 145 >UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C6P8I1_CLOTS Length = 155 Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 68/147 (46%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +D+KVIDSR + +S+RRRR+C+ C +RFTT+E E V V+K + RE Sbjct: 1 MKCPFCGYLDSKVIDSRPTDDSTSIRRRRECIKCGKRFTTYEKVEQVPILVIKKDLSREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +K+ GM++A EKRPV +E + I+ + + E+E+ S IG +VME+LK +D Sbjct: 61 YDRDKILKGMIKACEKRPVPIKKLEDLADEIERDIYNSYEKEITSAQIGEMVMEKLKNVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F+DI F +E+ +L Sbjct: 121 EVAYVRFASVYRQFKDINTFMDELKKL 147 >UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chloroflexi RepID=NRDR_CHLAD Length = 174 Score = 141 bits (356), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 69/147 (46%), Positives = 98/147 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPICHFPETDVIDTRKLYEGEVIRRRRKCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+D +E +N +++ + AT ++E+ S+ IG+ VM +L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVYRSF DI + E + L Sbjct: 121 EVAYIRFASVYRSFADIGKLREAVDEL 147 >UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopirellula baltica RepID=NRDR_RHOBA Length = 156 Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 68/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + + KV DSR G VRR+R C C RFTT E + + RVVKS++ REP Sbjct: 1 MRCPFCHSDNDKVQDSRTAEAGYVVRRKRLCQTCQRRFTTLEQIDALNVRVVKSDETREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK++ G+ RA KR V+SD++E + I+ + A + E+P+ IG +V+ +L LD Sbjct: 61 FDREKIKRGIERACSKRAVTSDEIEKTVQKIEEAIYAEFDMEIPTATIGEVVLRKLATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVYR F+D K+F + ++ L+ Sbjct: 121 EVAYIRFASVYRDFDDAKDFLQIVSNLQ 148 >UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepID=D1BM27_VEIPT Length = 163 Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 69/143 (48%), Positives = 96/143 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKV DSR EG+S+RRRR+C+ C RFTT+E+ E V V+K N RE Sbjct: 1 MRCPYCQHTDTKVTDSRTTDEGNSIRRRRECINCGRRFTTYEIIEEVPLMVLKKNGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+LR+ +KR V +E +N ++ +R +EV + IG LV++QLK +D Sbjct: 61 FDRGKLLNGLLRSCDKRTVPMSVMEQVVNDVERDIRNEINQEVTTDRIGELVLQQLKDID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEE 143 +VAY+RFASVYR F++I F EE Sbjct: 121 QVAYVRFASVYRKFDNIDSFMEE 143 >UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteria RepID=NRDR_STRPB Length = 164 Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 66/147 (44%), Positives = 103/147 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + V+DSR +G+++RRRR+C C+ RFTTFE E + V+K + RE Sbjct: 1 MRCPKCNYHKSSVVDSRQAEDGNTIRRRRECEQCHTRFTTFERVEELPLLVIKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++++ +KRPVSS D+E I+ I+ ++R T E EV S IGNLVM++L +LD Sbjct: 61 FSRDKILNGVVQSAQKRPVSSTDIENVISRIEQEVRTTYENEVSSTAIGNLVMDELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 ++ Y+RFASVY+SF+D+ E E + ++ Sbjct: 121 EITYVRFASVYKSFKDVDEIEELLQQI 147 >UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_BDEBA Length = 194 Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 98/144 (68%), Gaps = 1/144 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D +V+D+R+ +GS +RRRR+CL C RF+T E L P ++K + REP Sbjct: 1 MKCPFCGHADDRVLDTRVQKDGS-IRRRRECLECKARFSTVETIMLAFPFIIKKDGRREP 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+ G+ + +KRPVS ++ + I + + GE E+ S++IG VM +LK+LD Sbjct: 60 FSKEKILKGLQASCQKRPVSLAQIDAVVEKISAWVINRGESEISSRLIGKKVMAELKQLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 VAYIRFASVYR+F+D++EF E + Sbjct: 120 DVAYIRFASVYRTFKDVQEFVETL 143 >UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM01_9SPIO Length = 157 Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 66/149 (44%), Positives = 101/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +VD KV++SR +G+G +RRRR+CL C RFT++E E V+K N REP Sbjct: 1 MRCPYCGSVDDKVVESRTLGQGDCIRRRRECLSCGYRFTSYERIEEKPLMVIKRNGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ KL G+ R+LEKRP+S +++E ++ I+ + + G +E+ S +G +V+ +L Sbjct: 61 FDRSKLERGIERSLEKRPISMNEIENIVSDIEDAAVMNSKGAKEIKSTELGEMVLARLHS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LDKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 LDKVAYIRFASVYKKFNNLDEFINEVQKI 149 >UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocyclaceae RepID=NRDR_AZOSE Length = 171 Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust. Identities = 76/144 (52%), Positives = 101/144 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +T+V D+R G VRRRR+C C++RFTT+E +L MP +VK N R Sbjct: 1 MKCPFCGDPNTQVADTRENEGGEVVRRRRRCPKCDKRFTTYERIDLKMPHIVKRNGNRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F +KL M AL KRPV+ + ++ A++ I+++L A GE+EVPS+ +G LVM +LKKLD Sbjct: 61 FEHDKLAGSMKLALRKRPVTLEALDAAVDRIEAKLLALGEQEVPSEKVGELVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 KVAYIRFASVYR+F D+ EF E I Sbjct: 121 KVAYIRFASVYRNFADVDEFAEVI 144 >UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=NRDR_AKKM8 Length = 163 Score = 137 bits (346), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 69/147 (46%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR+ +G+++RRRR CL C+ R+TT+E E RVVK +++RE Sbjct: 1 MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 N EK+ G+++A EKRPVS D ++ A+ I S+L REVPS IG V+E+L +D Sbjct: 61 LNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAYIR+ SVYR F +++EF +EI ++ Sbjct: 121 PVAYIRYVSVYRQFSNVEEFIQEITQM 147 >UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteobacteria RepID=NRDR_METNO Length = 193 Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 72/147 (48%), Positives = 97/147 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +DT+V DSR + S++RRRR C C RFTTFE +L VVK + + P Sbjct: 1 MRCPYCGGLDTQVKDSRPSEDASAIRRRRICPDCGGRFTTFERVQLRELTVVKRSGRKVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL+ + AL KR V SD +E ++ I QL ++GE EV S+ IG LVME LK LD Sbjct: 61 FDRDKLQRSIDVALRKRSVESDRIERLVSGITRQLESSGEPEVTSEAIGELVMEGLKGLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F + K+F E + RL Sbjct: 121 DVAYVRFASVYKNFREAKDFEELLGRL 147 >UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_KOSOT Length = 158 Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 70/149 (46%), Positives = 101/149 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +T+VID+RL +G VRRRR+C C RFTT+E E VVK RE Sbjct: 1 MKCPFCNSEETRVIDTRLTDDGHVVRRRRECEHCGGRFTTYERFEQKPIFVVKKGGQRER 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+L+A EKRPVS +++E + I+ ++ +G+ E+ SK IG +VME+LK+ D Sbjct: 61 FDRNKVLNGILKACEKRPVSIEEIENMSSEIEQEVLRSGKAEISSKEIGEMVMEKLKRKD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F D+ F + I L+D Sbjct: 121 RVAYVRFASVYKEFRDLDHFMDIIRELKD 149 >UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria RepID=NRDR_MYCUA Length = 154 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 69/147 (46%), Positives = 93/147 (63%), Gaps = 3/147 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++VIDSR EG ++RRRR C C RFTT E A L VVK + V EP Sbjct: 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLA---VVKRSGVSEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ SG+ RA + R V D + + ++ +RA G E+PS +G ++ L++LD Sbjct: 58 FSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYRSF ++F EI L Sbjct: 118 EVAYLRFASVYRSFSSAEDFEREIEAL 144 >UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomycetales RepID=NRDR_NOCSJ Length = 172 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 95/147 (64%), Gaps = 3/147 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCP+C DT+V+DSR+ +G S+RRRR C C +RFTT E+ +L V+K + EP Sbjct: 1 MHCPYCRNTDTRVLDSRVADDGGSIRRRRTCSACAKRFTTVELMQLT---VLKRSGASEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F EK +G+ +A + RPV+ D + ++ LR G EVP+ +G ++ L++LD Sbjct: 58 FTREKAVAGVRKACKGRPVTEDQLACLGQAVEDALRLDGAAEVPAHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR+FE +F +EIA L Sbjct: 118 EVAYLRFASVYRAFESADDFEDEIAML 144 >UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria RepID=NRDR_PARL1 Length = 162 Score = 135 bits (339), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/147 (46%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DT+V DSR + +++RRRR C C RFTTFE +L ++K+N R P Sbjct: 1 MRCPYCGNEDTQVKDSRPTEDNTAIRRRRFCTACGGRFTTFERVQLRELTIIKTNGRRVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL + A+ KRPV + +E ++ I +L + GE E+PS MIG LVME L LD Sbjct: 61 FDRDKLMRSVQIAMRKRPVEQERIERMVSGIVRRLESMGESEIPSAMIGKLVMEGLSSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR+F + K+F E + L Sbjct: 121 AVAYVRFASVYRNFREAKDFEEFLGEL 147 >UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=C8WXT7_ALIAD Length = 176 Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 68/149 (45%), Positives = 101/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCL--VCNERFTTFEVAELVMPRVVKSNDVR 58 M CP+C A +T+VI+SR +G+++RRRR+C+ C RFTT+E E VVK + R Sbjct: 1 MKCPYCGADNTRVIESRPGEDGTTIRRRRECIHEACGRRFTTYERVEQRPLMVVKKDQKR 60 Query: 59 EPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 E F+ +KL G+++A EKRP+ ++ +E + I+ +LR EREVPS +IG VM+ L++ Sbjct: 61 EEFSRDKLYRGIMKACEKRPIPAETLEAVCDEIERKLRLEYEREVPSSVIGERVMDALRE 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LD VAY+RFASVYR F D++ +E+ L Sbjct: 121 LDGVAYVRFASVYREFRDVETLLKEVLAL 149 >UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria RepID=NRDR_SYNP2 Length = 181 Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 95/149 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C D++V++SR G G S+RRRR+CL C RFTT+E E V V+K N E Sbjct: 1 MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ GM+RA EK V +E I++QL+ +R + + IG+LV+ +L++ Sbjct: 61 FDRSKILRGMVRACEKTTVLPSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQES 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYR F+ + +F E ++ L+D Sbjct: 121 EVAYVRFASVYRQFQGVDDFIETLSHLQD 149 >UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H2_9CLOT Length = 149 Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 59/147 (40%), Positives = 102/147 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + +++V+DSR + +++RRRRQC C +RFTT+E E V+K + R+ Sbjct: 1 MRCPYCGSENSRVVDSRPAEDNNAIRRRRQCDECGKRFTTYEKIETDPLSVIKKDKTRQL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ K+R+G++++ K PVS +E AI+ I++++ G REV + +IG +VM++LK L+ Sbjct: 61 YDRNKIRNGIVQSCHKLPVSMGQIEAAIDEIETKIYNMGTREVETSVIGEMVMDKLKDLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFA++YR F+D+ F E+ +L Sbjct: 121 EVAYVRFAAIYREFKDVNTFMSELKKL 147 >UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinobacteria (class) RepID=NRDR_BIFA0 Length = 200 Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 65/149 (43%), Positives = 98/149 (65%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVID+R+ +G S+RRRR+C C RF+T E L++ + +S +V E Sbjct: 1 MHCPFCQNPDTKVIDTRISDDGHSIRRRRECPNCGARFSTLETTMLLVKK--RSGNV-EQ 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ +A + RP+ DD++ ++ LRA G +VPS +G ++ LK LD Sbjct: 58 FDRNKVIAGVRKACQGRPIHEDDLKRLGQQVEEDLRARGVAQVPSDEVGKAILRPLKDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY++FED+++F I L D Sbjct: 118 EVAYLRFASVYQNFEDLEDFQHAIDALRD 146 >UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_SYNWW Length = 150 Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V+DSR +GS +RRRR+C C RFTT+E E V+K RE Sbjct: 1 MRCPYCQEFESRVVDSRSGDDGSFIRRRRECNACKRRFTTYERLEERGLLVIKKGGNREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ RA EKRPVS +++E + I+ +LR E EV SK IG +VM++L++ D Sbjct: 61 FDRKKILDGIARACEKRPVSMEEMENMVASIERELRDLYEHEVSSKAIGEMVMDRLQRRD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F D+ F + I +L+ Sbjct: 121 EVAYVRFASVYRQFTDLNSFIKTIDQLK 148 >UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicutes RepID=NRDR_LACBA Length = 166 Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/144 (44%), Positives = 93/144 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C ++V+DSR +G +RRRR+C C RFTTFE E+ V+K N RE Sbjct: 1 MQCPHCHHNGSRVVDSRPTDDGRVIRRRRECESCGFRFTTFERVEVTPLLVIKKNGTREE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EK+ G++R+ EKRPV D + ++ +++++RA G E+ S++IG VM +L +D Sbjct: 61 FNREKVLRGIIRSAEKRPVGMDVMTQIVDEVENKIRALGVSEISSQLIGEYVMNRLVDVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 ++AYIRFASVYR F+D F E+ Sbjct: 121 EIAYIRFASVYRQFKDTGVFFNEL 144 >UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostridiales RepID=NRDR_CLONN Length = 158 Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 63/147 (42%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C ++KV+DSR + ++RRRR+CL CN R+TT+E E + V+K + RE Sbjct: 1 MKCPYCGFEESKVVDSRSTEDHKAIRRRRECLKCNRRYTTYEKIEDIPVLVIKRDSNREY 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ +G+++A +KRP+S ++ + I+ ++ EV S+ IG L+ME+LK++D Sbjct: 61 FDKTKIINGLVKACQKRPISRVQIDSIADEIEKKMNNDMLTEVKSEYIGELIMEKLKEID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +V+Y+RFASVYR F+DI F EEI L Sbjct: 121 EVSYVRFASVYRQFKDINTFIEEITNL 147 >UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD38_9ACTO Length = 195 Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust. Identities = 61/147 (41%), Positives = 95/147 (64%), Gaps = 3/147 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++V+D+R+ +G+S+RRRR+C C +RFTT E + +VVK + V E Sbjct: 1 MHCPFCHNPDSRVVDTRIADDGASIRRRRECTHCKKRFTTLETSSF---QVVKRSGVVES 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+ +A + RPVS D + + ++ QLR+TG V + +G ++ L+ LD Sbjct: 58 FSRNKVVSGVKKACQGRPVSDDQLAILAQQVEEQLRSTGVSNVSTNEVGKAILPFLRDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +AY+RFASVYR F+ + +F + I L Sbjct: 118 VIAYLRFASVYRQFDTLDDFEQAIQAL 144 >UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_CYAP4 Length = 184 Score = 130 bits (328), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 66/148 (44%), Positives = 97/148 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D++V++SR G SVRRRR+CL CN RFTT+E E V V+K + REP Sbjct: 1 MQCPLCQHTDSRVLESRSAEGGRSVRRRRECLKCNRRFTTYERIEYVPITVIKRDGQREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G++ A K +++ VE ++ I+++L+ REV S IG V++ LK+L Sbjct: 61 FDRSKLLRGIVTAFGKNGIANIRVEALVDEIEAELQQRALREVTSAEIGEAVLQNLKELS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ I++F +E+ L+ Sbjct: 121 EVAYVRFASVYRQFQSIRDFVDELNTLK 148 >UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria RepID=NRDR_TREDE Length = 151 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 64/149 (42%), Positives = 96/149 (64%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D KV++SR + +G +RRRR+CL C RFT++E E V+K + REP Sbjct: 1 MRCPHCGNCDDKVMESRTLAQGDCIRRRRECLACGYRFTSYEHIEEKPFMVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ +KL G+ RALEKRPVS + +E + I+ Q L + +E+ + ++G +V+ L Sbjct: 61 FDRKKLEKGIERALEKRPVSLNSIENIVTEIEDQAVLNSGLNKEIETTVLGEMVLSHLYS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 +DKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 IDKVAYIRFASVYKQFSNLDEFVNEVKKV 149 >UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomycetales RepID=NRDR_PROAC Length = 168 Score = 129 bits (323), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D++V+DSR+ +G+++RRRRQC +C RFTT E ++ V K N + EP Sbjct: 1 MRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMT---VHKRNGIEEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ A + RPV+ D+ + ++ LRA G E+PS+ IG ++ L++LD Sbjct: 58 FSRDKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVY ++ I++F EI RL D Sbjct: 118 SIAYLRFASVYLNYNTIEDFATEIDRLRD 146 >UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5R6_9BACT Length = 180 Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 99/148 (66%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFE-VAELVMPRVVKSNDVRE 59 M CP C +++T+V+++R EG ++RRRR+C C RFTT+E V E + + K + RE Sbjct: 11 MRCPQCGSMETRVMETRTAEEGRTIRRRRECTACGFRFTTYERVEERKVLWISKKDGRRE 70 Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ KL G+ RA E+ P+S D +E I+++LR +G+ EV S IG LVM++L ++ Sbjct: 71 AFDRSKLVRGISRACERLPISLDTIEDMAARIETRLRESGD-EVSSMAIGELVMKELAEI 129 Query: 120 DKVAYIRFASVYRSFEDIKEFGEEIARL 147 +KVAY+RFASVYR F D+ F EIA+L Sbjct: 130 NKVAYVRFASVYREFTDLSSFQREIAKL 157 >UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococci RepID=NRDR_DEIGD Length = 150 Score = 127 bits (318), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A D++V++SR +G+S+RRRR+CL CN RFTT+E A+L V+K RE Sbjct: 1 MKCPYCSAPDSRVVNSRPSDDGASIRRRRECLRCNRRFTTYERAQLEPLMVLKRGGQREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +KL G++ A EKRPV + + + +++A+ E+ S+ IG M L+ LD Sbjct: 61 FNPDKLLRGLILATEKRPVDPEQLRAFAYGFEDEVQAS---EITSEEIGRRAMTFLRPLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIRFASVYR F+ ++ F EEI L+ Sbjct: 118 DVAYIRFASVYRDFDSLERFIEEIQGLK 145 >UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_CYAA5 Length = 187 Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 98/149 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V++SR G S+RRRR+CL C RFTT+E E V V+K + +E Sbjct: 1 MQCPYCQHTNSRVLESRSSEGGQSIRRRRECLNCKHRFTTYERIEFVPITVIKHDGKKES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL GM+RA EK +S +E ++ I++ L+ +REV + IG LV++ L++ + Sbjct: 61 FDASKLLRGMVRACEKTGISHQRLETIVDDIEAYLQQRPQREVTTHEIGQLVLKYLREEN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVY F+ IK+F E + +L++ Sbjct: 121 EVAYIRFASVYGRFKGIKDFVETLDQLQE 149 >UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYP4_9FIRM Length = 156 Score = 125 bits (313), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 64/147 (43%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T V DSR + + +RRRR+CL CNE+FTT+E E + +V+K++ RE Sbjct: 1 MKCPKCGHTNTSVEDSRSALKDTVIRRRRKCLNCNEKFTTYERVERYIVKVIKNDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+R + A +KR +S D +E I I+ + +E+ SK IG LVME LKK+D Sbjct: 61 FSQEKIRKSINIACQKRKISQDTIEGIIKSIERTIENLDNKEIESKAIGGLVMEALKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY F + + F +E ++ Sbjct: 121 PVAYVRFASVYMDFTEPEGFIKEASKF 147 >UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacteriaceae RepID=NRDR_NATPD Length = 162 Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 66/144 (45%), Positives = 96/144 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP C T+VID+ +G+SVRRRR+C C+ RFTT+E E +V K + E Sbjct: 1 MNCPDCGNGRTRVIDTGASSDGASVRRRRECQRCSFRFTTYERPEWKSLQVKKRDGTIES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+++KLR+G+ RA+EKR V+ V ++ I+S+L+ R V S +IG LV E L+ LD Sbjct: 61 FDQQKLRTGIERAVEKRGVAETTVTALVDDIESELQDREARIVSSSLIGELVSENLRTLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 KVAYIRF SVY++F + +EF +E+ Sbjct: 121 KVAYIRFVSVYKAFSEPQEFLKEL 144 >UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_THEM4 Length = 151 Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 99/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +T+V+DSR+ G +VRRRR+C+ C RFTT+E E VVK + RE Sbjct: 1 MRCPYCGYEETRVLDSRVDSSGMTVRRRRECVKCKGRFTTYERYEFGPVFVVKKDGKREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+++A EK V+ +++E ++ + + ++ +G E+ + IG LVME+LKKL+ Sbjct: 61 FDRAKILNGVMKACEKTNVTLEEIEKLVDDVVNDVQKSGNLEILTLEIGKLVMEKLKKLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAY+RFASVY+ F +I +F E + L+ Sbjct: 121 GVAYVRFASVYKDFREIDQFLEVVEELK 148 >UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria RepID=NRDR_SYNJA Length = 200 Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 64/148 (43%), Positives = 96/148 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + +V++SR G SVRRRR+C+ C RFTT+E E + V+K + RE Sbjct: 1 MKCPRCGKQEIRVLESRSAEGGQSVRRRRECMSCGYRFTTYERIEFMPIMVIKRDGSRES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN K+ G++RA +K VS +E +N I+ +L+ +EV + IG +V+E+L++L Sbjct: 61 FNRNKILQGVMRACQKTQVSVKQMEELVNEIEEKLQLEDVQEVTTLRIGEMVLERLQRLS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ IK+F E+ +LE Sbjct: 121 EVAYVRFASVYRKFQGIKDFVTELEQLE 148 >UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria RepID=NRDR_ACIC5 Length = 168 Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 70/147 (47%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +V+DSR E S+RRRR+C CN+RFTT+E + + VVK + RE Sbjct: 1 MKCPYCGFAQDRVVDSRESKEADSIRRRRECERCNKRFTTYERIDEIPYMVVKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+LRA EKRP+S+ +E ++ ++ L + ERE + IG L+ME+LK+LD Sbjct: 61 FDRHKVLSGLLRACEKRPISATKLENLVDETEAYLMDSAERERSTTEIGLLLMEKLKQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 V+YIRFASVYR F+D+ EF EE+ +L Sbjct: 121 TVSYIRFASVYRDFKDVNEFKEELEQL 147 >UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae RepID=C7N9D5_LEPBD Length = 152 Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 99/148 (66%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFE-VAELVMPRVVKSNDVRE 59 M CPFC +TKVIDSR EG+S++RRR+C C +RFTT E VAEL + V+K N ++ Sbjct: 1 MRCPFCGYENTKVIDSRSYFEGNSIKRRRECENCGKRFTTHEKVAELSLT-VIKKNGQKQ 59 Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 P++ EK+ +G++RA EKR ++ +E I+ I+ ++ E+ S +G+ ++ L L Sbjct: 60 PYSREKVYNGIIRAFEKRHSDTEKIEEMIDKIEREILTEYSGEIKSSELGDKILSYLIDL 119 Query: 120 DKVAYIRFASVYRSFEDIKEFGEEIARL 147 D++AY+RFASVY+ F+ + F +EI ++ Sbjct: 120 DEIAYVRFASVYKKFDSLDSFVKEIEKI 147 >UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neorickettsia RepID=NRDR_NEOSM Length = 149 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 93/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT V DSR V EG+ ++RRR C C +FTTFE +L +V+K N E Sbjct: 1 MKCPFCGNRDTNVRDSRSVNEGTFIKRRRFCGECGAKFTTFETIQLKEIKVIKKNGSCES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK + AL KRPV+ + V+ +N + ++ + ++ +K+IG L+ME+L LD Sbjct: 61 FDREKAMRSVEVALRKRPVTRERVDELMNSVIYKIERIHDAKITAKVIGELIMEELATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVA+IRFASVY +FE+ K+F + I L Sbjct: 121 KVAFIRFASVYMNFENEKDFVQLIGSL 147 >UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG1_9BACT Length = 157 Score = 121 bits (303), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 67/148 (45%), Positives = 92/148 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C KV+++RL + + +RRRRQC CN RF+T E V+KS +E Sbjct: 1 MRCPECSNTSNKVLETRLSKDRNILRRRRQCNSCNTRFSTQEEMVRGDLMVIKSGGRKED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +K+R G+ AL KRPV D + A+ +IK + +REV S IG +VM +LK+LD Sbjct: 61 FNIQKVREGLQLALRKRPVGDDAINEAVENIKLSVSDRLDREVFSHEIGEMVMIELKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+D EF E I ++ Sbjct: 121 EVAYVRFASVYREFKDASEFIETIQSMQ 148 >UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria RepID=NRDR_CHLAA Length = 166 Score = 120 bits (302), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 70/149 (46%), Positives = 99/149 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC V+T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+ +E +N +++ + T E E+ S+ IG+ VM++L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSAAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVYR+F DI + E + L D Sbjct: 121 EVAYIRFASVYRAFTDIGKLREAVDELLD 149 >UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseria RepID=NRDR_NEIMB Length = 154 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 53/146 (36%), Positives = 93/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V DSRL+ E ++VRRRR C C +RF T E AEL MP V+ + R P Sbjct: 1 MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETAELKMPAVIGPDKKRSP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN ++LR+ + A K ++ + ++ + + +L +G+R++PS + ++V+++L + D Sbjct: 61 FNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRDIPSAALADMVLKELLRQD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 A +RFA++++ F++ +F +A+ Sbjct: 121 TEAAVRFAALHKRFDNPADFASWLAQ 146 >UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogenothermaceae RepID=NRDR_PERMH Length = 152 Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 63/149 (42%), Positives = 93/149 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +++ KV+D+R +G+ +RRRR+CL C RFTT+E E V K N EP Sbjct: 1 MKCPKCGSLNDKVVDTRQSKDGTVIRRRRECLDCGYRFTTYERFEEEKIVVKKKNGTTEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++K+ G+ A + RPVS + + I+ L G+ V S IG+LV E+LKK+D Sbjct: 61 FNKDKIIRGIRLASKNRPVSEKQMVEIADEIEKYLLEEGKLVVESTEIGDLVQEKLKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 V+Y+RF SVY F+DIK+F + + +E+ Sbjct: 121 PVSYLRFKSVYNEFQDIKDFEKALKEIEE 149 >UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria RepID=NRDR_METI4 Length = 166 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 65/148 (43%), Positives = 91/148 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR + EG S+RRRR+CL C RFTT+E + + V K N E Sbjct: 1 MKCIKCGNMEDKVIDSRPIKEGKSIRRRRECLRCGYRFTTYEEVQEIELFVKKRNGSIEQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ +ALEKRP++ +E ++ I + A +PS +IG VM +LK +D Sbjct: 61 FDRNKLMIGIQKALEKRPITQSQIEDFVDQIIEECSAEKSPIIPSFVIGTKVMNKLKTID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VA+IRFASVY F D K+F I+ L+ Sbjct: 121 EVAFIRFASVYCKFHDAKDFMNVISELK 148 >UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA6 Length = 155 Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 62/148 (41%), Positives = 91/148 (61%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CPFC D KVIDSR +RRRR+C+ C+ RFTT+EV E+ + V K + +P Sbjct: 1 MNCPFCGFNDFKVIDSR--PSDDRIRRRRECIKCHGRFTTYEVVEMPLLMVEKRDGSFQP 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ A++KRPV+ D V +++++ + SK IG LV+ +L+ LD Sbjct: 59 FDRNKLITGIFSAIKKRPVTIDQVSEIADYVENHYANALKTIAKSKEIGELVLNKLRDLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFASVY F D F +I+ +E Sbjct: 119 PIAYIRFASVYEDFTDTASFVAKISEIE 146 >UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae RepID=C7NVI2_HALUD Length = 160 Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 63/144 (43%), Positives = 87/144 (60%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C T V+D+ +G+S+RRRR+C C RFTT+E E +V K + EP Sbjct: 1 MDCPDCGNDRTHVLDTEPSADGTSIRRRRECQDCGFRFTTYERLEWESLQVKKRDGAIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ RA+EKRPV V ++ I L R V + IG+LV E L++ D Sbjct: 61 FDREKLRAGIERAVEKRPVDEQAVTAIVDAIHDALTEREGRIVTTTQIGDLVSEHLRERD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEI 144 +VAY+RF SVY +F D +EF E+ Sbjct: 121 QVAYLRFVSVYEAFADPEEFRREL 144 >UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG5_THET1 Length = 158 Score = 117 bits (294), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 65/147 (44%), Positives = 92/147 (62%), Gaps = 4/147 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + T+V DSR +++RRRR+C C RFTT+E E VMP VVK + RE Sbjct: 1 MRCPKCGSTRTRVTDSRETT--NAIRRRRKCEDCGYRFTTYERIEQVMPLVVKRDGTREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ KL +G+ A KRPVS ++ ++ I+ Q +G +EV S IG VM++L+ LD Sbjct: 59 WDRNKLLTGIRLACNKRPVSYSTMQQIVDEIEEQF--SGRQEVDSSEIGQAVMKKLRVLD 116 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVY F D+ F E + ++ Sbjct: 117 EVAYIRFASVYLRFHDVNGFIEAVEQV 143 >UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY15_ACIFD Length = 160 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 2/147 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +V+++R+ +G+++RRRR+CL C RFTTFE V K + EP Sbjct: 1 MRCPFCGTNEDRVVETRVADDGAAIRRRRECLGCGRRFTTFERITEARVLVRKRSGQLEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KLR G+ AL+ RP+ + ++E + ++ +RA EV S +G V+E L++LD Sbjct: 61 FDRDKLRRGVQAALKNRPIGALEIERLLAEVEEAVRAVD--EVESAELGLRVLEGLRQLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F D +F +A L Sbjct: 119 PVAYVRFASVYQNFTDADDFRRVLADL 145 >UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJE3_9FIRM Length = 148 Score = 115 bits (288), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 58/146 (39%), Positives = 92/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A T+V+DSR + + V+RRR C +CN +FTT+E + V+K + R+ Sbjct: 1 MKCPNCGAETTRVLDSRNSNDKTYVKRRRVCEICNYKFTTYEKMPEFVIFVLKKDGSRQI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ + EKR + ++E I+ I+ +R + E+ S IG LV++ LK LD Sbjct: 61 FSRNKVFAGIKKCCEKRNIQDKEIESVIDSIEMDIRQNYKNEIKSTQIGELVLKYLKSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 +V+YIRFA+VY+ F+DIK F E + + Sbjct: 121 EVSYIRFAAVYKEFKDIKAFLEYLQK 146 >UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJP7_9BACT Length = 153 Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/145 (41%), Positives = 89/145 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + KVIDSR +GS++RRRR+CL C+ RF+T E V K + RE Sbjct: 1 MRCPKCGSELDKVIDSRASKDGSTIRRRRECLDCSHRFSTTEQVLRENLYVTKRDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ + RA +KRPV ++ + + + + L + E PS IG+ V+E LK +D Sbjct: 61 FDKAKIIYSLRRACQKRPVDAEQINILVEDMIDALESEFGMEFPSSAIGDKVLENLKSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIA 145 +AYIRFASVY+ F+++ EF +EI Sbjct: 121 PIAYIRFASVYKDFKNLDEFLDEIG 145 >UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae RepID=D1AYC7_STRM9 Length = 154 Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 89/140 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +TKV+DSR +G+S++RRR+C +CN+RF T E + V+K N E Sbjct: 1 MKCPYCGDKETKVVDSRSYSDGNSIKRRRECDLCNKRFNTIEKIFNLPIVVIKKNGEVEE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G++R+L KR + V+ I+ I+ ++ + ++ S ++G+ ++E+L D Sbjct: 61 FDRNKIYQGIIRSLVKRSYVQNKVDEMIDEIEREILTNYDGKIHSNVLGDTILEKLFLFD 120 Query: 121 KVAYIRFASVYRSFEDIKEF 140 +VAYIRFASVY FE++ F Sbjct: 121 EVAYIRFASVYNKFENLDSF 140 >UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DU07_EIKCO Length = 106 Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 51/101 (50%), Positives = 76/101 (75%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 MP+++K+N R F+ KL++ + RAL KRP+S++ +E ++ I+ L TG +EVPS++ Sbjct: 1 MPQIIKNNGERVMFDPLKLQTSLQRALHKRPISAEAIEHTVHEIEECLYKTGSKEVPSRL 60 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 IG LVME+L KLD+VAY+RFASVY+SF+D+ EF +A LE Sbjct: 61 IGELVMERLAKLDQVAYVRFASVYKSFKDVAEFTRTVAGLE 101 >UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobacteria RepID=NRDR_SYNPX Length = 160 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 63/140 (45%), Positives = 87/140 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP D++V++SR G SVRRRR+CL C RFTT+E E V V+K N RE Sbjct: 1 MQCPSYQNTDSRVLESRAADGGRSVRRRRECLNCEFRFTTYERVETVPITVIKRNGNREI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ RA EK + + +E + ++ +L+ REV S IG LV+ +LK++ Sbjct: 61 FSRSKLLHGLNRACEKTGLDASRLETLVEELELKLQQRSGREVSSAEIGELVLVELKQMS 120 Query: 121 KVAYIRFASVYRSFEDIKEF 140 +VAYIRFASVYR F+ I +F Sbjct: 121 EVAYIRFASVYRQFQGIDDF 140 >UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=A3VLS6_9RHOB Length = 145 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 55/126 (43%), Positives = 82/126 (65%) Query: 15 DSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRAL 74 DSR + ++RRRR C C RFTT+E +L V+KSN RE F+ EKL + ++ Sbjct: 3 DSRPAEDHVAIRRRRFCPACGGRFTTYERVQLRDLVVIKSNGRREDFDREKLERSIRISM 62 Query: 75 EKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSF 134 +KRPV + ++ I+ I +L + GE ++PSK IG +VME L ++D VAY+RFASVY++F Sbjct: 63 QKRPVEPERIDQMISGIVRRLESMGETDIPSKTIGEIVMESLARIDTVAYVRFASVYKNF 122 Query: 135 EDIKEF 140 + +F Sbjct: 123 QAADDF 128 >UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydiales RepID=NRDR_PARUW Length = 162 Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 1/148 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC KV DSR E +++RRRR+CL C +RFTTFE EL + +V K + E Sbjct: 1 MRCPFCQFEGLKVTDSRDAMEMNAIRRRRECLNCLKRFTTFETIELTV-QVQKRDGTYED 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F + KL +G+ A +S D V + ++L + +++ + +G + M+ L+ LD Sbjct: 60 FQQHKLINGLAAACRHTKISHDQVISLAAQMTNELMQSQIQQISTTQLGEMAMKHLQSLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFA VY+ F+D+ E E I ++ Sbjct: 120 PIAYIRFACVYKRFKDLGELEEAIKTIQ 147 >UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZR79_9FIRM Length = 121 Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 48/117 (41%), Positives = 75/117 (64%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C +RFTT+E E + V+K + RE ++ K++ G+LRA KRP+ + +E ++ Sbjct: 2 CESCGKRFTTYEKVETIPLSVIKKDQTREQYDRSKIQGGILRACYKRPIPVEKIESLMDS 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARL 147 I+ + T ++E+ S IG +VME LK LD VAY+RFASVYR F+D+ F +E+ + Sbjct: 62 IEGDIFDTADKEISSTRIGEIVMEHLKDLDAVAYVRFASVYREFKDVSTFMDELKKF 118 >UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candidate division TM7 RepID=UPI00016B2574 Length = 155 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 83/131 (63%) Query: 10 DTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSG 69 D+KV++SR +G+G ++RRRR+ L RFTT+E E V+K N RE F+ EKL Sbjct: 10 DSKVLESRELGDGKTIRRRRETLDGKCRFTTYERIERPDLSVIKKNSKRELFDREKLARA 69 Query: 70 MLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFAS 129 + +++ K S +VE IN + + GE EV S IG++V++ L K +++AY+RFAS Sbjct: 70 ISQSVGKFFTSEIEVEQIINETEEAIYNLGETEVLSSAIGDIVLDILAKKNEIAYVRFAS 129 Query: 130 VYRSFEDIKEF 140 VYR F+ + EF Sbjct: 130 VYRDFKTLDEF 140 >UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9U3_9DELT Length = 235 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 67/110 (60%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C RFTT E + +P V+K R+PF+ K+R G+ A KR +SS+ ++ + Sbjct: 2 CNECGHRFTTRERIDETLPMVLKRTGERQPFDRNKIRRGLDIACRKRGISSEGLDRIVQQ 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEF 140 I++ G+RE+ S+ IG +M L LD+VAY+RF SVYRSF+ I EF Sbjct: 62 IETWASTKGDREIDSEEIGERIMHHLYALDQVAYVRFVSVYRSFDSIAEF 111 >UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL66_9FIRM Length = 104 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 66/87 (75%) Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+G++RA EKR +SS +E +N ++ +R ++EVP+++IGNL+ME+L+KLD Sbjct: 2 FDRNKLRNGLVRACEKRNISSRQIEEIVNSVERTVRNELKQEVPTEVIGNLIMEELRKLD 61 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F+D+ F E+ L Sbjct: 62 QVAYVRFASVYREFKDLSSFMSELETL 88 >UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFP5_MEIRU Length = 161 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 3/136 (2%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSR EGS +RRRR+C VC RFTT+E A++ V+K + +E F+ KL G+ Sbjct: 1 MLDSRPSDEGSVIRRRRECPVCKRRFTTYERAQVEPLLVIKRSGRKETFDPNKLLRGLSL 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYR 132 A KRP+ + ++ + ++ E E+ S+ IG + LK+LD VAYIRFASVYR Sbjct: 61 AARKRPIDPEVLQEFAFGFEDTVK---EMEITSEEIGLRSLAFLKELDPVAYIRFASVYR 117 Query: 133 SFEDIKEFGEEIARLE 148 F+ ++ F EE+ +L+ Sbjct: 118 EFDSLENFIEEVRKLD 133 >UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6G3_9ACTN Length = 104 Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 43/99 (43%), Positives = 69/99 (69%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 V+K + +EPF+ EKLR G++ A KR + + + I+ I+++LR G+ E+ S+ IG Sbjct: 5 VIKKDGTKEPFSHEKLRRGLVAATIKRSIDLNRINQLIDSIETELRDNGKTEITSQEIGM 64 Query: 111 LVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 V+++L +DKVAY+RFASVYR F+D++EF EE+ L + Sbjct: 65 RVLQKLIDIDKVAYVRFASVYRDFKDVEEFSEELRSLSN 103 >UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0PDU3_9FIRM Length = 118 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 46/97 (47%), Positives = 66/97 (68%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 V+K + RE F+ KL +G++RA EKRPV +E A+ I+ L + ++EVPS IG Sbjct: 9 VIKKDKSREGFDSGKLLAGLVRACEKRPVPLGILEDAVRDIEMMLHNSLDKEVPSYRIGE 68 Query: 111 LVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARL 147 L ME+L+ +D+VAY+RFASVYR F+DI F +E+ L Sbjct: 69 LAMEKLRAIDEVAYVRFASVYRQFKDIDSFMKELQSL 105 >UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEJ6_9ACTN Length = 118 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 1/116 (0%) Query: 34 CNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHIK 92 C RFTT+E VVK++ + FN EKL G+ A KRP + +D I+ I+ Sbjct: 3 CGNRFTTYERLGDNPLIVVKADGSSQVFNREKLYRGISIACAKRPNIPNDKKTEIIDAIE 62 Query: 93 SQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 + LR +G E+ SK +G++V+E LK LD VAYIRFASVY+ F+ I+EF + + L+ Sbjct: 63 TALRNSGRAEINSKDLGDMVLEHLKPLDDVAYIRFASVYKDFQSIEEFQDALKGLK 118 >UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia alni ACN14a RepID=Q0RDY4_FRAAA Length = 224 Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 66/98 (67%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 RV+K + V EPF+ K+ +G+ +A + RPV DD+ + ++ +R++G EVP++ IG Sbjct: 7 RVLKRSGVAEPFSRAKVITGVRKACQGRPVRDDDLALLAQRVEDAVRSSGSAEVPAEAIG 66 Query: 110 NLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARL 147 ++ L++LD+VAY+RFASVY +FE + +F IA L Sbjct: 67 RAILGPLRELDEVAYLRFASVYLAFESLGDFENAIAAL 104 >UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia RepID=B4D972_9BACT Length = 97 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 42/81 (51%), Positives = 57/81 (70%) Query: 68 SGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRF 127 GM++A EKRPVS + +E + I +L RE+PS +IG VM++L +LD+VAY+R+ Sbjct: 3 GGMIKACEKRPVSIEVLEKSAEEIVQELETEFRREIPSNVIGAKVMDKLHQLDEVAYVRY 62 Query: 128 ASVYRSFEDIKEFGEEIARLE 148 ASVYR F+DI EF EEI LE Sbjct: 63 ASVYRHFQDIGEFLEEIQSLE 83 >UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGT6_HALO1 Length = 164 Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 74/132 (56%), Gaps = 4/132 (3%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + D++V+DSR G VRRRRQC C RFTT+E A +V+K ++ E Sbjct: 1 MQCPYCGS-DSQVLDSR--GNADGVRRRRQCNACRRRFTTYERAGAPSLKVIKRSERVEG 57 Query: 61 FNEEKLRSGMLRALEKR-PVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ +KL+ + R R +S+ D+ I+++L + V S I +L + +L + Sbjct: 58 FDSDKLQRALERVCRGRSAISASDIRRIARDIEAELVDASAKSVHSGQIVDLALRRLADI 117 Query: 120 DKVAYIRFASVY 131 D++AY R A Y Sbjct: 118 DRIAYNRLAVNY 129 >UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UCB8_9RHOB Length = 116 Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 40/94 (42%), Positives = 64/94 (68%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 V+KS+ RE F+ +KL +L A +KR + + VE I+ I +L + G+ +VP+ +IG Sbjct: 8 VIKSDGKREGFDRDKLARSVLLASQKRAIERERVEQMISGIVRRLESRGDPDVPASVIGE 67 Query: 111 LVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEI 144 LVM+ L+ LD VAY+R+ASVY+ F+++ +F E I Sbjct: 68 LVMDGLRNLDTVAYVRYASVYKDFQEVDDFSEFI 101 >UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019030D6 Length = 120 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 59/102 (57%) Query: 39 TTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT 98 TTFE +L + + + F + + AL KRPV D +E A++ I S+L ++ Sbjct: 1 TTFERVQLRRADGHQEDGPQGAFRSRQAGALFEVALRKRPVERDRIERAVSGIVSRLESS 60 Query: 99 GEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEF 140 GE E+ S+ IG V+E +K LD V ++R+ASVYR F ++F Sbjct: 61 GETEISSEQIGLQVLEAMKSLDDVGFVRYASVYRDFSLAEDF 102 >UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8P3_9ACTN Length = 78 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 51/77 (66%) Query: 71 LRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASV 130 +RA KR + ++ I+ I+ +LR + S IG++V+++L+++DKVAYIRFASV Sbjct: 1 MRATSKRDIDLSELNALIDDIERELRGGTLTAIRSHDIGDMVLKRLERIDKVAYIRFASV 60 Query: 131 YRSFEDIKEFGEEIARL 147 YR F D+ EF E+ +L Sbjct: 61 YRDFRDVDEFISELDKL 77 >UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent to dnaB in Bacillus subtilis (Fragment) n=1 Tax=Mycobacterium tuberculosis RepID=Q50818_MYCTU Length = 143 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 28/69 (40%), Positives = 42/69 (60%) Query: 79 VSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK 138 V D + + ++ +RA G E+PS +G ++ L++LD+VAY+RFASVYRSF Sbjct: 1 VDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSAD 60 Query: 139 EFGEEIARL 147 +F EI L Sbjct: 61 DFAREIEAL 69 >UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZR2_9AQUI Length = 88 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 42/68 (61%) Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYR 132 A + RPVS E I+ L G+ V S IG+LV ++LKKLD ++YIRF SVY Sbjct: 3 AAKNRPVSQKQAEEIAEDIEKYLIDEGKLLVESTEIGDLVQQRLKKLDIISYIRFKSVYN 62 Query: 133 SFEDIKEF 140 F+D+K+F Sbjct: 63 EFKDLKDF 70 >UniRef50_UPI0000393417 COG1327: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains n=1 Tax=Bifidobacterium longum DJO10A RepID=UPI0000393417 Length = 93 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 44/66 (66%) Query: 68 SGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRF 127 SG+ +A + RPV +D+++ ++ LR+ G EV S +G +++ L+ LD VAY+RF Sbjct: 3 SGVRKACQGRPVREEDLKLLGQKVEEDLRSRGLAEVTSDEVGKAILKPLRDLDVVAYLRF 62 Query: 128 ASVYRS 133 ASVY++ Sbjct: 63 ASVYQN 68 >UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsiella grylli RepID=A8PM40_9COXI Length = 69 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/40 (45%), Positives = 25/40 (62%) Query: 4 PFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEV 43 P C T+VI+SR EG + RRR C CN+R+T+ E+ Sbjct: 6 PHCDYAKTRVINSRKTEEGKKILRRRHCPKCNKRYTSIEL 45 >UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylobacterium extorquens group RepID=B7KYT4_METC4 Length = 128 Score = 39.3 bits (90), Expect = 0.035, Method: Compositional matrix adjust. Identities = 22/43 (51%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSV-RRRRQCLVCNERFTTFE 42 M CP C A DT++IDSR + + V RRRR+C+ C RF T E Sbjct: 1 MICPKCSA-DTRLIDSRPHQDDAGVIRRRRKCVACGHRFFTQE 42 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C... 236 2e-61 UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria ... 234 5e-61 UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria ... 233 1e-60 UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria... 232 3e-60 UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria... 229 3e-59 UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria... 228 4e-59 UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteri... 228 4e-59 UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteoba... 228 5e-59 UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostri... 227 6e-59 UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammapro... 226 2e-58 UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema... 225 3e-58 UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinob... 224 7e-58 UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 224 7e-58 UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostrid... 223 1e-57 UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteob... 223 1e-57 UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria ... 223 2e-57 UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=... 223 2e-57 UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteoba... 222 2e-57 UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria... 222 3e-57 UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepI... 221 5e-57 UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicut... 221 7e-57 UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteoba... 221 7e-57 UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=... 220 1e-56 UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteoba... 219 2e-56 UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria ... 219 2e-56 UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 219 2e-56 UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteri... 218 3e-56 UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 218 3e-56 UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria ... 218 4e-56 UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholde... 217 1e-55 UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria... 216 2e-55 UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 215 3e-55 UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chlorofle... 214 5e-55 UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus... 214 7e-55 UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogeno... 214 8e-55 UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinom... 213 1e-54 UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococc... 213 2e-54 UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasm... 212 2e-54 UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria... 212 3e-54 UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptoc... 212 3e-54 UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae... 212 4e-54 UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomi... 212 4e-54 UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaprot... 211 4e-54 UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum te... 209 2e-53 UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomy... 208 4e-53 UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ru... 208 4e-53 UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria... 208 5e-53 UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermans... 206 2e-52 UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidob... 205 4e-52 UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae... 204 1e-51 UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopire... 203 1e-51 UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacte... 202 2e-51 UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae... 201 5e-51 UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomyc... 201 6e-51 UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria... 200 8e-51 UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimo... 200 1e-50 UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacteri... 200 1e-50 UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocycl... 198 4e-50 UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neoricket... 197 7e-50 UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydi... 197 9e-50 UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobac... 197 9e-50 UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium f... 194 6e-49 UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseri... 192 2e-48 UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisp... 192 4e-48 UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria... 190 7e-48 UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphapr... 188 4e-47 UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiotherm... 183 2e-45 UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminoc... 175 3e-43 UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=En... 174 9e-43 UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesioc... 170 2e-41 UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candida... 167 1e-40 UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 ... 166 2e-40 UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochra... 153 2e-36 UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteri... 152 4e-36 UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenel... 143 1e-33 UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=At... 142 3e-33 UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia... 137 1e-31 UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanic... 134 9e-31 UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470... 131 9e-30 UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rh... 117 1e-25 UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia ... 117 2e-25 UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent t... 103 2e-21 UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collins... 99 4e-20 UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydroge... 97 1e-19 UniRef50_UPI0000393417 COG1327: Predicted transcriptional regula... 88 1e-16 Sequences not found previously or not previously below threshold: UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsi... 65 5e-10 UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase ... 62 5e-09 UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylo... 61 1e-08 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 57 2e-07 UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales ... 53 4e-06 UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n... 52 5e-06 UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase ... 51 1e-05 UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobact... 51 1e-05 UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase ... 49 4e-05 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 49 4e-05 UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucl... 49 5e-05 UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase ... 48 7e-05 UniRef50_A3CYA4 Putative uncharacterized protein n=1 Tax=Methano... 48 1e-04 UniRef50_B2VQ43 Putative uncharacterized protein n=2 Tax=unclass... 47 2e-04 UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate red... 47 2e-04 UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase ... 46 3e-04 UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korar... 45 6e-04 UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y... 45 6e-04 UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase ... 45 7e-04 UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase ... 45 7e-04 UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate r... 45 0.001 UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase ... 45 0.001 UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase ... 44 0.001 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 44 0.001 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 44 0.001 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 44 0.001 UniRef50_A7I025 Transcriptional repressor NrdR n=1 Tax=Campyloba... 44 0.001 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 44 0.002 UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus pla... 44 0.002 UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.002 UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.002 UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaeroc... 43 0.003 UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaeroc... 43 0.003 UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.003 UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.003 UniRef50_A3CW86 Putative uncharacterized protein n=1 Tax=Methano... 42 0.006 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 42 0.008 UniRef50_A4CGY5 Putative uncharacterized protein n=3 Tax=Bactero... 41 0.012 UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 41 0.014 UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase ... 40 0.022 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 40 0.023 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 40 0.023 UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase ... 40 0.026 UniRef50_B2A0Y5 Putative uncharacterized protein n=1 Tax=Natrana... 40 0.029 UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase ... 39 0.039 UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B... 39 0.041 UniRef50_UPI0001BCE5C3 transcriptional repressor NrdR n=3 Tax=Ca... 39 0.046 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 39 0.047 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 39 0.048 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 39 0.055 UniRef50_D0L6F0 Putative uncharacterized protein n=1 Tax=Gordoni... 38 0.079 UniRef50_B7JWC1 Transposase IS204/IS1001/IS1096/IS1165 family pr... 38 0.079 UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostr... 38 0.086 UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate red... 38 0.088 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 38 0.089 UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase ... 38 0.089 UniRef50_A8ZMX8 Putative uncharacterized protein n=5 Tax=Acaryoc... 38 0.091 >UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C6P8I1_CLOTS Length = 155 Score = 236 bits (603), Expect = 2e-61, Method: Composition-based stats. Identities = 68/149 (45%), Positives = 102/149 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +D+KVIDSR + +S+RRRR+C+ C +RFTT+E E V V+K + RE Sbjct: 1 MKCPFCGYLDSKVIDSRPTDDSTSIRRRRECIKCGKRFTTYEKVEQVPILVIKKDLSREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +K+ GM++A EKRPV +E + I+ + + E+E+ S IG +VME+LK +D Sbjct: 61 YDRDKILKGMIKACEKRPVPIKKLEDLADEIERDIYNSYEKEITSAQIGEMVMEKLKNVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYR F+DI F +E+ +L + Sbjct: 121 EVAYVRFASVYRQFKDINTFMDELKKLLN 149 >UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria RepID=NRDR_GEOUR Length = 150 Score = 234 bits (599), Expect = 5e-61, Method: Composition-based stats. Identities = 73/147 (49%), Positives = 105/147 (71%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D+KV+DSR GS++RRRR+C C +RFTT E E ++P V+K + REP Sbjct: 1 MKCPFCAFADSKVVDSRPDKGGSTIRRRRECESCGKRFTTHERVEEILPLVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ +A EKRPVS + +E ++ ++ Q++ +GE+E+PSK +G VM +L +D Sbjct: 61 FDRMKLVAGIQKACEKRPVSVETIERLVDRLEIQMQESGEKEIPSKSLGEWVMAELHSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYRSF+DI EF E+ L Sbjct: 121 QVAYVRFASVYRSFKDITEFMSELQDL 147 >UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria RepID=NRDR_SYNP2 Length = 181 Score = 233 bits (595), Expect = 1e-60, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 95/149 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C D++V++SR G G S+RRRR+CL C RFTT+E E V V+K N E Sbjct: 1 MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ GM+RA EK V +E I++QL+ +R + + IG+LV+ +L++ Sbjct: 61 FDRSKILRGMVRACEKTTVLPSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQES 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYR F+ + +F E ++ L+D Sbjct: 121 EVAYVRFASVYRQFQGVDDFIETLSHLQD 149 >UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_CYAA5 Length = 187 Score = 232 bits (592), Expect = 3e-60, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 98/149 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V++SR G S+RRRR+CL C RFTT+E E V V+K + +E Sbjct: 1 MQCPYCQHTNSRVLESRSSEGGQSIRRRRECLNCKHRFTTYERIEFVPITVIKHDGKKES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL GM+RA EK +S +E ++ I++ L+ +REV + IG LV++ L++ + Sbjct: 61 FDASKLLRGMVRACEKTGISHQRLETIVDDIEAYLQQRPQREVTTHEIGQLVLKYLREEN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVY F+ IK+F E + +L++ Sbjct: 121 EVAYIRFASVYGRFKGIKDFVETLDQLQE 149 >UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_CYAP4 Length = 184 Score = 229 bits (584), Expect = 3e-59, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 97/148 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D++V++SR G SVRRRR+CL CN RFTT+E E V V+K + REP Sbjct: 1 MQCPLCQHTDSRVLESRSAEGGRSVRRRRECLKCNRRFTTYERIEYVPITVIKRDGQREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G++ A K +++ VE ++ I+++L+ REV S IG V++ LK+L Sbjct: 61 FDRSKLLRGIVTAFGKNGIANIRVEALVDEIEAELQQRALREVTSAEIGEAVLQNLKELS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ I++F +E+ L+ Sbjct: 121 EVAYVRFASVYRQFQSIRDFVDELNTLK 148 >UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria RepID=NRDR_FERNB Length = 153 Score = 228 bits (583), Expect = 4e-59, Method: Composition-based stats. Identities = 74/149 (49%), Positives = 109/149 (73%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+DSR + EG ++RRRR+C C+ RFTT+E E V+K + RE Sbjct: 1 MRCPFCGYEDTRVLDSRELSEGRAIRRRRECPQCHARFTTYERYETGPITVIKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G+L+A EKRP++ DD+E +++I SQL+ +G EVPS++IG LVME+L+K+D Sbjct: 61 FDRKKILNGLLKAFEKRPITVDDMERIVDNIVSQLQKSGTLEVPSELIGKLVMEELRKVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F +I +F E I L + Sbjct: 121 QVAYVRFASVYKDFREIDQFIEVIKELRN 149 >UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteria RepID=NRDR_MYXXD Length = 168 Score = 228 bits (583), Expect = 4e-59, Method: Composition-based stats. Identities = 78/149 (52%), Positives = 106/149 (71%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + KVIDSR EGS +RRRR+CL C RFTT+E E + P +VK + RE Sbjct: 1 MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ +G+ +A EKRPVS+D +E + I+ QL+ GE+EVPS +IG +M +L++LD Sbjct: 61 FDREKIVNGLKKACEKRPVSADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYRSF DI EF +E+ L + Sbjct: 121 EVAYVRFASVYRSFRDIAEFMDELKALRE 149 >UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteobacteria RepID=NRDR_MARAV Length = 172 Score = 228 bits (582), Expect = 5e-59, Method: Composition-based stats. Identities = 101/147 (68%), Positives = 122/147 (82%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVIDSRLV EG VRRRR+CL C ERFTTFE AELVMPRVVK + R+P Sbjct: 1 MHCPFCGEADTKVIDSRLVAEGDQVRRRRECLSCRERFTTFETAELVMPRVVKQDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR+G+++ALEKRPVS ++++ A+N IK +LR+TGEREV S +G VM +L++LD Sbjct: 61 FDEEKLRAGIMKALEKRPVSIEEIDAALNRIKYRLRSTGEREVKSMQLGEEVMTELRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVYRSF+DI EF EEI RL Sbjct: 121 KVAYVRFASVYRSFQDINEFKEEIERL 147 >UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H2_9CLOT Length = 149 Score = 227 bits (581), Expect = 6e-59, Method: Composition-based stats. Identities = 59/147 (40%), Positives = 102/147 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + +++V+DSR + +++RRRRQC C +RFTT+E E V+K + R+ Sbjct: 1 MRCPYCGSENSRVVDSRPAEDNNAIRRRRQCDECGKRFTTYEKIETDPLSVIKKDKTRQL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ K+R+G++++ K PVS +E AI+ I++++ G REV + +IG +VM++LK L+ Sbjct: 61 YDRNKIRNGIVQSCHKLPVSMGQIEAAIDEIETKIYNMGTREVETSVIGEMVMDKLKDLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFA++YR F+D+ F E+ +L Sbjct: 121 EVAYVRFAAIYREFKDVNTFMSELKKL 147 >UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammaproteobacteria RepID=NRDR_SHEFN Length = 149 Score = 226 bits (577), Expect = 2e-58, Method: Composition-based stats. Identities = 108/148 (72%), Positives = 126/148 (85%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC A DTKVIDSRLV +G VRRRR+C C+ERFTTFE AELVMPRV+K + R+P Sbjct: 1 MHCPFCSATDTKVIDSRLVADGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR GMLRA+EKRPVS D++E A+ IKS LRATGEREV S+MIGNL+MEQL LD Sbjct: 61 FDEEKLRGGMLRAVEKRPVSIDEIEQALTKIKSTLRATGEREVNSEMIGNLMMEQLMSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYR+FED+ +FGE IA+L+ Sbjct: 121 KVAYIRFASVYRAFEDVSQFGEAIAKLQ 148 >UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM01_9SPIO Length = 157 Score = 225 bits (575), Expect = 3e-58, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 101/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +VD KV++SR +G+G +RRRR+CL C RFT++E E V+K N REP Sbjct: 1 MRCPYCGSVDDKVVESRTLGQGDCIRRRRECLSCGYRFTSYERIEEKPLMVIKRNGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ KL G+ R+LEKRP+S +++E ++ I+ + + G +E+ S +G +V+ +L Sbjct: 61 FDRSKLERGIERSLEKRPISMNEIENIVSDIEDAAVMNSKGAKEIKSTELGEMVLARLHS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LDKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 LDKVAYIRFASVYKKFNNLDEFINEVQKI 149 >UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinobacteria (class) RepID=NRDR_BIFA0 Length = 200 Score = 224 bits (572), Expect = 7e-58, Method: Composition-based stats. Identities = 65/149 (43%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVID+R+ +G S+RRRR+C C RF+T E M V K + E Sbjct: 1 MHCPFCQNPDTKVIDTRISDDGHSIRRRRECPNCGARFSTLET---TMLLVKKRSGNVEQ 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ +A + RP+ DD++ ++ LRA G +VPS +G ++ LK LD Sbjct: 58 FDRNKVIAGVRKACQGRPIHEDDLKRLGQQVEEDLRARGVAQVPSDEVGKAILRPLKDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY++FED+++F I L D Sbjct: 118 EVAYLRFASVYQNFEDLEDFQHAIDALRD 146 >UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_BDEBA Length = 194 Score = 224 bits (572), Expect = 7e-58, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D +V+D+R+ +G S+RRRR+CL C RF+T E L P ++K + REP Sbjct: 1 MKCPFCGHADDRVLDTRVQKDG-SIRRRRECLECKARFSTVETIMLAFPFIIKKDGRREP 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+ G+ + +KRPVS ++ + I + + GE E+ S++IG VM +LK+LD Sbjct: 60 FSKEKILKGLQASCQKRPVSLAQIDAVVEKISAWVINRGESEISSRLIGKKVMAELKQLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIRFASVYR+F+D++EF E + E Sbjct: 120 DVAYIRFASVYRTFKDVQEFVETLEDAE 147 >UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostridiales RepID=NRDR_CLONN Length = 158 Score = 223 bits (570), Expect = 1e-57, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C ++KV+DSR + ++RRRR+CL CN R+TT+E E + V+K + RE Sbjct: 1 MKCPYCGFEESKVVDSRSTEDHKAIRRRRECLKCNRRYTTYEKIEDIPVLVIKRDSNREY 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ +G+++A +KRP+S ++ + I+ ++ EV S+ IG L+ME+LK++D Sbjct: 61 FDKTKIINGLVKACQKRPISRVQIDSIADEIEKKMNNDMLTEVKSEYIGELIMEKLKEID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +V+Y+RFASVYR F+DI F EEI L Sbjct: 121 EVSYVRFASVYRQFKDINTFIEEITNL 147 >UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteobacteria RepID=NRDR_THISH Length = 172 Score = 223 bits (569), Expect = 1e-57, Method: Composition-based stats. Identities = 98/148 (66%), Positives = 114/148 (77%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT+VIDSRL GEG VRRRR+CL C+ERFTT+E AEL MPRVVK + REP Sbjct: 1 MRCPFCGAPDTRVIDSRLAGEGDQVRRRRECLSCSERFTTYENAELNMPRVVKRDGSREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNE+KL+SGM ALEKR VS+D VE A+ IK +L GEREV S+ IG VME+L+ LD Sbjct: 61 FNEDKLKSGMTHALEKRAVSTDKVEEAVARIKRKLLGQGEREVDSRRIGEWVMEELRNLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVY SF D++ F E I RLE Sbjct: 121 QVAYIRFASVYLSFADVQAFREVIERLE 148 >UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria RepID=NRDR_SYNJA Length = 200 Score = 223 bits (569), Expect = 2e-57, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 96/148 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + +V++SR G SVRRRR+C+ C RFTT+E E + V+K + RE Sbjct: 1 MKCPRCGKQEIRVLESRSAEGGQSVRRRRECMSCGYRFTTYERIEFMPIMVIKRDGSRES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN K+ G++RA +K VS +E +N I+ +L+ +EV + IG +V+E+L++L Sbjct: 61 FNRNKILQGVMRACQKTQVSVKQMEELVNEIEEKLQLEDVQEVTTLRIGEMVLERLQRLS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ IK+F E+ +LE Sbjct: 121 EVAYVRFASVYRKFQGIKDFVTELEQLE 148 >UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=C9R8L5_AMMDK Length = 163 Score = 223 bits (569), Expect = 2e-57, Method: Composition-based stats. Identities = 75/147 (51%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+D+R EG+++RRRR+C C RFTTFE E + V+K + RE Sbjct: 1 MRCPFCHFADTRVVDTRSANEGTAIRRRRECPRCGRRFTTFERVEELPLVVIKKDGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G LRA KRPV +D+E ++ ++ +LR E E+PS +IG LVME+LK+LD Sbjct: 61 FDRAKILGGCLRACHKRPVRREDLENLVDEVERELRNRLEPEIPSYVIGELVMEKLKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F D +F EEI RL Sbjct: 121 EVAYVRFASVYREFRDSYDFKEEIERL 147 >UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteobacteria RepID=NRDR_NITEC Length = 160 Score = 222 bits (567), Expect = 2e-57, Method: Composition-based stats. Identities = 78/148 (52%), Positives = 99/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT V+DSR+ EGS +RRRRQC C +RFTT+E E+ P+++K R Sbjct: 1 MRCPFCGAEDTSVVDSRVSEEGSRIRRRRQCTACGKRFTTYETVEVRFPQIIKQGGNRVE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EKL + RAL KRPV V+ AI I +L G +E+ S+ IG VM++L KLD Sbjct: 61 FNREKLYTSFARALHKRPVPVGQVDAAIERILQKLLGGGAQEISSRTIGEWVMQELYKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYRSFED+ +F E I ++ Sbjct: 121 KVAYIRFASVYRSFEDVGDFQEVIREVQ 148 >UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_KOSOT Length = 158 Score = 222 bits (567), Expect = 3e-57, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 101/149 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +T+VID+RL +G VRRRR+C C RFTT+E E VVK RE Sbjct: 1 MKCPFCNSEETRVIDTRLTDDGHVVRRRRECEHCGGRFTTYERFEQKPIFVVKKGGQRER 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+L+A EKRPVS +++E + I+ ++ +G+ E+ SK IG +VME+LK+ D Sbjct: 61 FDRNKVLNGILKACEKRPVSIEEIENMSSEIEQEVLRSGKAEISSKEIGEMVMEKLKRKD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F D+ F + I L+D Sbjct: 121 RVAYVRFASVYKEFRDLDHFMDIIRELKD 149 >UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepID=D1BM27_VEIPT Length = 163 Score = 221 bits (565), Expect = 5e-57, Method: Composition-based stats. Identities = 69/143 (48%), Positives = 96/143 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKV DSR EG+S+RRRR+C+ C RFTT+E+ E V V+K N RE Sbjct: 1 MRCPYCQHTDTKVTDSRTTDEGNSIRRRRECINCGRRFTTYEIIEEVPLMVLKKNGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+LR+ +KR V +E +N ++ +R +EV + IG LV++QLK +D Sbjct: 61 FDRGKLLNGLLRSCDKRTVPMSVMEQVVNDVERDIRNEINQEVTTDRIGELVLQQLKDID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEE 143 +VAY+RFASVYR F++I F EE Sbjct: 121 QVAYVRFASVYRKFDNIDSFMEE 143 >UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicutes RepID=NRDR_LACBA Length = 166 Score = 221 bits (563), Expect = 7e-57, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C ++V+DSR +G +RRRR+C C RFTTFE E+ V+K N RE Sbjct: 1 MQCPHCHHNGSRVVDSRPTDDGRVIRRRRECESCGFRFTTFERVEVTPLLVIKKNGTREE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EK+ G++R+ EKRPV D + ++ +++++RA G E+ S++IG VM +L +D Sbjct: 61 FNREKVLRGIIRSAEKRPVGMDVMTQIVDEVENKIRALGVSEISSQLIGEYVMNRLVDVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 ++AYIRFASVYR F+D F E+ + Sbjct: 121 EIAYIRFASVYRQFKDTGVFFNELKDM 147 >UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteobacteria RepID=NRDR_METNO Length = 193 Score = 221 bits (563), Expect = 7e-57, Method: Composition-based stats. Identities = 72/147 (48%), Positives = 97/147 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +DT+V DSR + S++RRRR C C RFTTFE +L VVK + + P Sbjct: 1 MRCPYCGGLDTQVKDSRPSEDASAIRRRRICPDCGGRFTTFERVQLRELTVVKRSGRKVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL+ + AL KR V SD +E ++ I QL ++GE EV S+ IG LVME LK LD Sbjct: 61 FDRDKLQRSIDVALRKRSVESDRIERLVSGITRQLESSGEPEVTSEAIGELVMEGLKGLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F + K+F E + RL Sbjct: 121 DVAYVRFASVYKNFREAKDFEELLGRL 147 >UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=C8WXT7_ALIAD Length = 176 Score = 220 bits (561), Expect = 1e-56, Method: Composition-based stats. Identities = 68/149 (45%), Positives = 100/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQC--LVCNERFTTFEVAELVMPRVVKSNDVR 58 M CP+C A +T+VI+SR +G+++RRRR+C C RFTT+E E VVK + R Sbjct: 1 MKCPYCGADNTRVIESRPGEDGTTIRRRRECIHEACGRRFTTYERVEQRPLMVVKKDQKR 60 Query: 59 EPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 E F+ +KL G+++A EKRP+ ++ +E + I+ +LR EREVPS +IG VM+ L++ Sbjct: 61 EEFSRDKLYRGIMKACEKRPIPAETLEAVCDEIERKLRLEYEREVPSSVIGERVMDALRE 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LD VAY+RFASVYR F D++ +E+ L Sbjct: 121 LDGVAYVRFASVYREFRDVETLLKEVLAL 149 >UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteobacteria RepID=NRDR_XYLFM Length = 181 Score = 219 bits (560), Expect = 2e-56, Method: Composition-based stats. Identities = 77/148 (52%), Positives = 108/148 (72%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+C FC DT+VIDSR+ +G+++RRRR+C C ERF+T E EL +P ++K + RE Sbjct: 1 MYCLFCQHTDTRVIDSRVSEDGATIRRRRECEACGERFSTLETIELKLPVIIKKDGGREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+ RAL+KRPV+ + +EMA+ + +LR GEREVPS ++G VM +L+KLD Sbjct: 61 FDGRKLRTSFDRALQKRPVAEERIEMAMRAVIHRLRMAGEREVPSIVVGECVMAELRKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 V Y+RFASVYRSF+D+ +F EEI +LE Sbjct: 121 HVGYVRFASVYRSFQDVADFREEIEKLE 148 >UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria RepID=NRDR_TREDE Length = 151 Score = 219 bits (559), Expect = 2e-56, Method: Composition-based stats. Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D KV++SR + +G +RRRR+CL C RFT++E E V+K + REP Sbjct: 1 MRCPHCGNCDDKVMESRTLAQGDCIRRRRECLACGYRFTSYEHIEEKPFMVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ +KL G+ RALEKRPVS + +E + I+ Q L + +E+ + ++G +V+ L Sbjct: 61 FDRKKLEKGIERALEKRPVSLNSIENIVTEIEDQAVLNSGLNKEIETTVLGEMVLSHLYS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 +DKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 IDKVAYIRFASVYKQFSNLDEFVNEVKKVR 150 >UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_SYNWW Length = 150 Score = 219 bits (559), Expect = 2e-56, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V+DSR +GS +RRRR+C C RFTT+E E V+K RE Sbjct: 1 MRCPYCQEFESRVVDSRSGDDGSFIRRRRECNACKRRFTTYERLEERGLLVIKKGGNREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ RA EKRPVS +++E + I+ +LR E EV SK IG +VM++L++ D Sbjct: 61 FDRKKILDGIARACEKRPVSMEEMENMVASIERELRDLYEHEVSSKAIGEMVMDRLQRRD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F D+ F + I +L+ Sbjct: 121 EVAYVRFASVYRQFTDLNSFIKTIDQLK 148 >UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteria RepID=NRDR_STRPB Length = 164 Score = 218 bits (557), Expect = 3e-56, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 104/149 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + V+DSR +G+++RRRR+C C+ RFTTFE E + V+K + RE Sbjct: 1 MRCPKCNYHKSSVVDSRQAEDGNTIRRRRECEQCHTRFTTFERVEELPLLVIKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++++ +KRPVSS D+E I+ I+ ++R T E EV S IGNLVM++L +LD Sbjct: 61 FSRDKILNGVVQSAQKRPVSSTDIENVISRIEQEVRTTYENEVSSTAIGNLVMDELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 ++ Y+RFASVY+SF+D+ E E + ++ + Sbjct: 121 EITYVRFASVYKSFKDVDEIEELLQQITN 149 >UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_DEHSC Length = 175 Score = 218 bits (557), Expect = 3e-56, Method: Composition-based stats. Identities = 72/147 (48%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP+C D+KVIDSR V +G VRRRR+C+VC +RFTT+E + VVK + RE Sbjct: 1 MNCPYCSHPDSKVIDSRDVDDG--VRRRRECVVCGQRFTTYERFQPAGLFVVKKDQRREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN+EKL SG+ RA EKRP+ + V+ I+++L G+ E+PS ++G++VME+LK LD Sbjct: 59 FNKEKLLSGLRRACEKRPLPAGAVDKVAGDIEAELYNMGKAEIPSTLLGDMVMERLKMLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +AY+RFASVYR F DI + + + L Sbjct: 119 NIAYVRFASVYREFTDITQLKKVVDNL 145 >UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria RepID=NRDR_METI4 Length = 166 Score = 218 bits (557), Expect = 4e-56, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 91/148 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR + EG S+RRRR+CL C RFTT+E + + V K N E Sbjct: 1 MKCIKCGNMEDKVIDSRPIKEGKSIRRRRECLRCGYRFTTYEEVQEIELFVKKRNGSIEQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ +ALEKRP++ +E ++ I + A +PS +IG VM +LK +D Sbjct: 61 FDRNKLMIGIQKALEKRPITQSQIEDFVDQIIEECSAEKSPIIPSFVIGTKVMNKLKTID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VA+IRFASVY F D K+F I+ L+ Sbjct: 121 EVAFIRFASVYCKFHDAKDFMNVISELK 148 >UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholderiales Genera incertae sedis RepID=NRDR_METPP Length = 147 Score = 217 bits (553), Expect = 1e-55, Method: Composition-based stats. Identities = 78/147 (53%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V ++R EG +RRRR+C C++RFTT+E AEL MP +VK + R Sbjct: 1 MRCPFCGHEDTQVAETRESDEGDVIRRRRRCPSCDKRFTTYERAELAMPAIVKKDGSRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+R+ M+ AL KRPVS D VE A+ I+ ++ AT EVPS IG +VM +LKKLD Sbjct: 61 FDRSKIRASMMLALRKRPVSIDQVEAALGRIEEKMLATAANEVPSAKIGEMVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVYRSFE + EF I + Sbjct: 121 KVAYVRFASVYRSFEGVDEFSRLIKDI 147 >UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria RepID=NRDR_PARL1 Length = 162 Score = 216 bits (552), Expect = 2e-55, Method: Composition-based stats. Identities = 68/147 (46%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DT+V DSR + +++RRRR C C RFTTFE +L ++K+N R P Sbjct: 1 MRCPYCGNEDTQVKDSRPTEDNTAIRRRRFCTACGGRFTTFERVQLRELTIIKTNGRRVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL + A+ KRPV + +E ++ I +L + GE E+PS MIG LVME L LD Sbjct: 61 FDRDKLMRSVQIAMRKRPVEQERIERMVSGIVRRLESMGESEIPSAMIGKLVMEGLSSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR+F + K+F E + L Sbjct: 121 AVAYVRFASVYRNFREAKDFEEFLGEL 147 >UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_THEM4 Length = 151 Score = 215 bits (549), Expect = 3e-55, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 99/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +T+V+DSR+ G +VRRRR+C+ C RFTT+E E VVK + RE Sbjct: 1 MRCPYCGYEETRVLDSRVDSSGMTVRRRRECVKCKGRFTTYERYEFGPVFVVKKDGKREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+++A EK V+ +++E ++ + + ++ +G E+ + IG LVME+LKKL+ Sbjct: 61 FDRAKILNGVMKACEKTNVTLEEIEKLVDDVVNDVQKSGNLEILTLEIGKLVMEKLKKLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAY+RFASVY+ F +I +F E + L+ Sbjct: 121 GVAYVRFASVYKDFREIDQFLEVVEELK 148 >UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chloroflexi RepID=NRDR_CHLAD Length = 174 Score = 214 bits (547), Expect = 5e-55, Method: Composition-based stats. Identities = 69/149 (46%), Positives = 99/149 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPICHFPETDVIDTRKLYEGEVIRRRRKCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+D +E +N +++ + AT ++E+ S+ IG+ VM +L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVYRSF DI + E + L + Sbjct: 121 EVAYIRFASVYRSFADIGKLREAVDELLE 149 >UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1W9_HALNC Length = 175 Score = 214 bits (546), Expect = 7e-55, Method: Composition-based stats. Identities = 82/147 (55%), Positives = 112/147 (76%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C +T VIDSR+V G S+RRRR+CL C +RFTT+E A++ +PR+VKSN R+ Sbjct: 1 MQCIACGHPNTHVIDSRMVEGGVSIRRRRECLACKQRFTTYETADIRLPRIVKSNGARQS 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNEEKLRSGM+RALEKRPV++ ++ I+ IK L+ATG +EV ++ IG+LVM+ L++LD Sbjct: 61 FNEEKLRSGMMRALEKRPVATSRIDDEIDQIKKSLQATGAKEVTARKIGDLVMQALRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVY SF++++ F I L Sbjct: 121 QVAYIRFASVYLSFDNVEAFRAAIEGL 147 >UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogenothermaceae RepID=NRDR_PERMH Length = 152 Score = 214 bits (545), Expect = 8e-55, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 93/149 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +++ KV+D+R +G+ +RRRR+CL C RFTT+E E V K N EP Sbjct: 1 MKCPKCGSLNDKVVDTRQSKDGTVIRRRRECLDCGYRFTTYERFEEEKIVVKKKNGTTEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++K+ G+ A + RPVS + + I+ L G+ V S IG+LV E+LKK+D Sbjct: 61 FNKDKIIRGIRLASKNRPVSEKQMVEIADEIEKYLLEEGKLVVESTEIGDLVQEKLKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 V+Y+RF SVY F+DIK+F + + +E+ Sbjct: 121 PVSYLRFKSVYNEFQDIKDFEKALKEIEE 149 >UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD38_9ACTO Length = 195 Score = 213 bits (544), Expect = 1e-54, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++V+D+R+ +G+S+RRRR+C C +RFTT E +VVK + V E Sbjct: 1 MHCPFCHNPDSRVVDTRIADDGASIRRRRECTHCKKRFTTLET---SSFQVVKRSGVVES 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+ +A + RPVS D + + ++ QLR+TG V + +G ++ L+ LD Sbjct: 58 FSRNKVVSGVKKACQGRPVSDDQLAILAQQVEEQLRSTGVSNVSTNEVGKAILPFLRDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVYR F+ + +F + I L + Sbjct: 118 VIAYLRFASVYRQFDTLDDFEQAIQALRE 146 >UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococci RepID=NRDR_DEIGD Length = 150 Score = 213 bits (543), Expect = 2e-54, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A D++V++SR +G+S+RRRR+CL CN RFTT+E A+L V+K RE Sbjct: 1 MKCPYCSAPDSRVVNSRPSDDGASIRRRRECLRCNRRFTTYERAQLEPLMVLKRGGQREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +KL G++ A EKRPV + + + +++A+ E+ S+ IG M L+ LD Sbjct: 61 FNPDKLLRGLILATEKRPVDPEQLRAFAYGFEDEVQAS---EITSEEIGRRAMTFLRPLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIRFASVYR F+ ++ F EEI L+ Sbjct: 118 DVAYIRFASVYRDFDSLERFIEEIQGLK 145 >UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasmataceae RepID=NRDR_EHRCJ Length = 153 Score = 212 bits (542), Expect = 2e-54, Method: Composition-based stats. Identities = 71/147 (48%), Positives = 99/147 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC ++T+V DSR + + +RRRR CLVCN RFTT E L V+K N EP Sbjct: 1 MKCPFCNNINTQVKDSRAIEDDILIRRRRICLVCNSRFTTIEKLLLRSFMVIKKNGETEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++KL S +L A +KRPVS + + + +N+I +L E VP+ +IG +VM+ L KLD Sbjct: 61 FNKQKLLSSILIATKKRPVSHEGINVMVNNIFYELEGKKENAVPTDVIGKMVMDNLFKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVY +F++I +F IA++ Sbjct: 121 KVAYVRFASVYMNFKNINDFSNIIAKI 147 >UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_RUBXD Length = 156 Score = 212 bits (541), Expect = 3e-54, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 103/147 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKVIDSRL ++RRRR+CL C +RFTT+E E + V+K + REP Sbjct: 1 MQCPYCDHEDTKVIDSRLSEAKDAIRRRRECLACGKRFTTYERREPLRLMVLKRDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ +A K+ V+ + +++ ++ I+++LR EV S+ IG++V+ +L++LD Sbjct: 61 FDREKLRAGLEKACAKQRVTGEQIDLIVDQIEAELRERRRHEVTSRRIGDMVLARLRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR + D+ +F E+ RL Sbjct: 121 MVAYLRFASVYRQYTDVDQFRSELLRL 147 >UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptococcus RepID=NRDR_STRP2 Length = 157 Score = 212 bits (541), Expect = 3e-54, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 102/147 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A + VIDSR EG+++RRRR+C C RFTT+E E VVK + RE Sbjct: 1 MRCPKCGATKSSVIDSRQAEEGNTIRRRRECDECQHRFTTYERVEERTLVVVKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++R+ +KRPVSSD++ M +N I+ +LR E E+ S+ IG+LVME+L +LD Sbjct: 61 FSRDKIFNGIIRSAQKRPVSSDEINMVVNRIEQKLRGRNENEIQSEDIGSLVMEELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 ++ Y+RFASVYRSF+D+ E + ++ Sbjct: 121 EITYVRFASVYRSFKDVSELESLLQQI 147 >UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae RepID=C7N9D5_LEPBD Length = 152 Score = 212 bits (540), Expect = 4e-54, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 96/149 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +TKVIDSR EG+S++RRR+C C +RFTT E + V+K N ++P Sbjct: 1 MRCPFCGYENTKVIDSRSYFEGNSIKRRRECENCGKRFTTHEKVAELSLTVIKKNGQKQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ +G++RA EKR ++ +E I+ I+ ++ E+ S +G+ ++ L LD Sbjct: 61 YSREKVYNGIIRAFEKRHSDTEKIEEMIDKIEREILTEYSGEIKSSELGDKILSYLIDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 ++AY+RFASVY+ F+ + F +EI ++ + Sbjct: 121 EIAYVRFASVYKKFDSLDSFVKEIEKIRN 149 >UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJP7_9BACT Length = 153 Score = 212 bits (540), Expect = 4e-54, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 90/147 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + KVIDSR +GS++RRRR+CL C+ RF+T E V K + RE Sbjct: 1 MRCPKCGSELDKVIDSRASKDGSTIRRRRECLDCSHRFSTTEQVLRENLYVTKRDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ + RA +KRPV ++ + + + + L + E PS IG+ V+E LK +D Sbjct: 61 FDKAKIIYSLRRACQKRPVDAEQINILVEDMIDALESEFGMEFPSSAIGDKVLENLKSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +AYIRFASVY+ F+++ EF +EI + Sbjct: 121 PIAYIRFASVYKDFKNLDEFLDEIGGI 147 >UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaproteobacteria RepID=NRDR_PSYWF Length = 153 Score = 211 bits (539), Expect = 4e-54, Method: Composition-based stats. Identities = 82/148 (55%), Positives = 110/148 (74%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A DTKVIDSRL EG+ VRRRRQC C ERFTTFEV E+VMPR++KSN EP Sbjct: 1 MQCPYCNADDTKVIDSRLAAEGAQVRRRRQCNQCQERFTTFEVVEVVMPRIIKSNGRIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +KL+ + L+KRPV+ D+ E I+ I+ ++R GERE+ SK +G +VM +LK+LD Sbjct: 61 YDSQKLKRSIQLPLQKRPVTLDEQEAMISRIEKRIRQLGEREISSKGLGEVVMSELKELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAY+RFASVYR F+DI+ F +E+ + Sbjct: 121 DVAYVRFASVYRDFQDIEAFRQELQNIR 148 >UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG5_THET1 Length = 158 Score = 209 bits (533), Expect = 2e-53, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 4/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + T+V DSR +++RRRR+C C RFTT+E E VMP VVK + RE Sbjct: 1 MRCPKCGSTRTRVTDSRETT--NAIRRRRKCEDCGYRFTTYERIEQVMPLVVKRDGTREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ KL +G+ A KRPVS ++ ++ I+ Q +G +EV S IG VM++L+ LD Sbjct: 59 WDRNKLLTGIRLACNKRPVSYSTMQQIVDEIEEQF--SGRQEVDSSEIGQAVMKKLRVLD 116 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVY F D+ F E + ++ Sbjct: 117 EVAYIRFASVYLRFHDVNGFIEAVEQVR 144 >UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomycetales RepID=NRDR_NOCSJ Length = 172 Score = 208 bits (531), Expect = 4e-53, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCP+C DT+V+DSR+ +G S+RRRR C C +RFTT E+ + V+K + EP Sbjct: 1 MHCPYCRNTDTRVLDSRVADDGGSIRRRRTCSACAKRFTTVELMQ---LTVLKRSGASEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F EK +G+ +A + RPV+ D + ++ LR G EVP+ +G ++ L++LD Sbjct: 58 FTREKAVAGVRKACKGRPVTEDQLACLGQAVEDALRLDGAAEVPAHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR+FE +F +EIA L Sbjct: 118 EVAYLRFASVYRAFESADDFEDEIAMLR 145 >UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA6 Length = 155 Score = 208 bits (531), Expect = 4e-53, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CPFC D KVIDSR + +RRRR+C+ C+ RFTT+EV E+ + V K + +P Sbjct: 1 MNCPFCGFNDFKVIDSRPSDDR--IRRRRECIKCHGRFTTYEVVEMPLLMVEKRDGSFQP 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ A++KRPV+ D V +++++ + SK IG LV+ +L+ LD Sbjct: 59 FDRNKLITGIFSAIKKRPVTIDQVSEIADYVENHYANALKTIAKSKEIGELVLNKLRDLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFASVY F D F +I+ +E Sbjct: 119 PIAYIRFASVYEDFTDTASFVAKISEIE 146 >UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria RepID=NRDR_MYCUA Length = 154 Score = 208 bits (530), Expect = 5e-53, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 93/148 (62%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++VIDSR EG ++RRRR C C RFTT E A + VVK + V EP Sbjct: 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETA---VLAVVKRSGVSEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ SG+ RA + R V D + + ++ +RA G E+PS +G ++ L++LD Sbjct: 58 FSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYRSF ++F EI L Sbjct: 118 EVAYLRFASVYRSFSSAEDFEREIEALR 145 >UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=NRDR_AKKM8 Length = 163 Score = 206 bits (525), Expect = 2e-52, Method: Composition-based stats. Identities = 69/148 (46%), Positives = 100/148 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR+ +G+++RRRR CL C+ R+TT+E E RVVK +++RE Sbjct: 1 MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 N EK+ G+++A EKRPVS D ++ A+ I S+L REVPS IG V+E+L +D Sbjct: 61 LNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIR+ SVYR F +++EF +EI ++ Sbjct: 121 PVAYIRYVSVYRQFSNVEEFIQEITQMR 148 >UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5R6_9BACT Length = 180 Score = 205 bits (523), Expect = 4e-52, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELV-MPRVVKSNDVRE 59 M CP C +++T+V+++R EG ++RRRR+C C RFTT+E E + + K + RE Sbjct: 11 MRCPQCGSMETRVMETRTAEEGRTIRRRRECTACGFRFTTYERVEERKVLWISKKDGRRE 70 Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ KL G+ RA E+ P+S D +E I+++LR +G+ EV S IG LVM++L ++ Sbjct: 71 AFDRSKLVRGISRACERLPISLDTIEDMAARIETRLRESGD-EVSSMAIGELVMKELAEI 129 Query: 120 DKVAYIRFASVYRSFEDIKEFGEEIARL 147 +KVAY+RFASVYR F D+ F EIA+L Sbjct: 130 NKVAYVRFASVYREFTDLSSFQREIAKL 157 >UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae RepID=C7NVI2_HALUD Length = 160 Score = 204 bits (519), Expect = 1e-51, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 89/149 (59%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C T V+D+ +G+S+RRRR+C C RFTT+E E +V K + EP Sbjct: 1 MDCPDCGNDRTHVLDTEPSADGTSIRRRRECQDCGFRFTTYERLEWESLQVKKRDGAIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ RA+EKRPV V ++ I L R V + IG+LV E L++ D Sbjct: 61 FDREKLRAGIERAVEKRPVDEQAVTAIVDAIHDALTEREGRIVTTTQIGDLVSEHLRERD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RF SVY +F D +EF E+ + D Sbjct: 121 QVAYLRFVSVYEAFADPEEFRRELDAVLD 149 >UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopirellula baltica RepID=NRDR_RHOBA Length = 156 Score = 203 bits (518), Expect = 1e-51, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + + KV DSR G VRR+R C C RFTT E + + RVVKS++ REP Sbjct: 1 MRCPFCHSDNDKVQDSRTAEAGYVVRRKRLCQTCQRRFTTLEQIDALNVRVVKSDETREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK++ G+ RA KR V+SD++E + I+ + A + E+P+ IG +V+ +L LD Sbjct: 61 FDREKIKRGIERACSKRAVTSDEIEKTVQKIEEAIYAEFDMEIPTATIGEVVLRKLATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVYR F+D K+F + ++ L+ Sbjct: 121 EVAYIRFASVYRDFDDAKDFLQIVSNLQ 148 >UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacteriaceae RepID=NRDR_NATPD Length = 162 Score = 202 bits (516), Expect = 2e-51, Method: Composition-based stats. Identities = 66/147 (44%), Positives = 97/147 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP C T+VID+ +G+SVRRRR+C C+ RFTT+E E +V K + E Sbjct: 1 MNCPDCGNGRTRVIDTGASSDGASVRRRRECQRCSFRFTTYERPEWKSLQVKKRDGTIES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+++KLR+G+ RA+EKR V+ V ++ I+S+L+ R V S +IG LV E L+ LD Sbjct: 61 FDQQKLRTGIERAVEKRGVAETTVTALVDDIESELQDREARIVSSSLIGELVSENLRTLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAYIRF SVY++F + +EF +E+ + Sbjct: 121 KVAYIRFVSVYKAFSEPQEFLKELDAV 147 >UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae RepID=D1AYC7_STRM9 Length = 154 Score = 201 bits (513), Expect = 5e-51, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 91/147 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +TKV+DSR +G+S++RRR+C +CN+RF T E + V+K N E Sbjct: 1 MKCPYCGDKETKVVDSRSYSDGNSIKRRRECDLCNKRFNTIEKIFNLPIVVIKKNGEVEE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G++R+L KR + V+ I+ I+ ++ + ++ S ++G+ ++E+L D Sbjct: 61 FDRNKIYQGIIRSLVKRSYVQNKVDEMIDEIEREILTNYDGKIHSNVLGDTILEKLFLFD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVY FE++ F I + Sbjct: 121 EVAYIRFASVYNKFENLDSFLNTIKEV 147 >UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomycetales RepID=NRDR_PROAC Length = 168 Score = 201 bits (512), Expect = 6e-51, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D++V+DSR+ +G+++RRRRQC +C RFTT E ++ V K N + EP Sbjct: 1 MRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMT---VHKRNGIEEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ A + RPV+ D+ + ++ LRA G E+PS+ IG ++ L++LD Sbjct: 58 FSRDKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVY ++ I++F EI RL D Sbjct: 118 SIAYLRFASVYLNYNTIEDFATEIDRLRD 146 >UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria RepID=NRDR_ACIC5 Length = 168 Score = 200 bits (511), Expect = 8e-51, Method: Composition-based stats. Identities = 70/147 (47%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +V+DSR E S+RRRR+C CN+RFTT+E + + VVK + RE Sbjct: 1 MKCPYCGFAQDRVVDSRESKEADSIRRRRECERCNKRFTTYERIDEIPYMVVKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+LRA EKRP+S+ +E ++ ++ L + ERE + IG L+ME+LK+LD Sbjct: 61 FDRHKVLSGLLRACEKRPISATKLENLVDETEAYLMDSAERERSTTEIGLLLMEKLKQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 V+YIRFASVYR F+D+ EF EE+ +L Sbjct: 121 TVSYIRFASVYRDFKDVNEFKEELEQL 147 >UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJE3_9FIRM Length = 148 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 92/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A T+V+DSR + + V+RRR C +CN +FTT+E + V+K + R+ Sbjct: 1 MKCPNCGAETTRVLDSRNSNDKTYVKRRRVCEICNYKFTTYEKMPEFVIFVLKKDGSRQI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ + EKR + ++E I+ I+ +R + E+ S IG LV++ LK LD Sbjct: 61 FSRNKVFAGIKKCCEKRNIQDKEIESVIDSIEMDIRQNYKNEIKSTQIGELVLKYLKSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 +V+YIRFA+VY+ F+DIK F E + + Sbjct: 121 EVSYIRFAAVYKEFKDIKAFLEYLQK 146 >UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYP4_9FIRM Length = 156 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T V DSR + + +RRRR+CL CNE+FTT+E E + +V+K++ RE Sbjct: 1 MKCPKCGHTNTSVEDSRSALKDTVIRRRRKCLNCNEKFTTYERVERYIVKVIKNDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+R + A +KR +S D +E I I+ + +E+ SK IG LVME LKK+D Sbjct: 61 FSQEKIRKSINIACQKRKISQDTIEGIIKSIERTIENLDNKEIESKAIGGLVMEALKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY F + + F +E ++ Sbjct: 121 PVAYVRFASVYMDFTEPEGFIKEASKF 147 >UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocyclaceae RepID=NRDR_AZOSE Length = 171 Score = 198 bits (505), Expect = 4e-50, Method: Composition-based stats. Identities = 76/148 (51%), Positives = 103/148 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +T+V D+R G VRRRR+C C++RFTT+E +L MP +VK N R Sbjct: 1 MKCPFCGDPNTQVADTRENEGGEVVRRRRRCPKCDKRFTTYERIDLKMPHIVKRNGNRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F +KL M AL KRPV+ + ++ A++ I+++L A GE+EVPS+ +G LVM +LKKLD Sbjct: 61 FEHDKLAGSMKLALRKRPVTLEALDAAVDRIEAKLLALGEQEVPSEKVGELVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYR+F D+ EF E I ++ Sbjct: 121 KVAYIRFASVYRNFADVDEFAEVIREVK 148 >UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neorickettsia RepID=NRDR_NEOSM Length = 149 Score = 197 bits (503), Expect = 7e-50, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 93/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT V DSR V EG+ ++RRR C C +FTTFE +L +V+K N E Sbjct: 1 MKCPFCGNRDTNVRDSRSVNEGTFIKRRRFCGECGAKFTTFETIQLKEIKVIKKNGSCES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK + AL KRPV+ + V+ +N + ++ + ++ +K+IG L+ME+L LD Sbjct: 61 FDREKAMRSVEVALRKRPVTRERVDELMNSVIYKIERIHDAKITAKVIGELIMEELATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVA+IRFASVY +FE+ K+F + I L Sbjct: 121 KVAFIRFASVYMNFENEKDFVQLIGSL 147 >UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydiales RepID=NRDR_PARUW Length = 162 Score = 197 bits (502), Expect = 9e-50, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC KV DSR E +++RRRR+CL C +RFTTFE EL +V K + E Sbjct: 1 MRCPFCQFEGLKVTDSRDAMEMNAIRRRRECLNCLKRFTTFETIELT-VQVQKRDGTYED 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F + KL +G+ A +S D V + ++L + +++ + +G + M+ L+ LD Sbjct: 60 FQQHKLINGLAAACRHTKISHDQVISLAAQMTNELMQSQIQQISTTQLGEMAMKHLQSLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFA VY+ F+D+ E E I ++ Sbjct: 120 PIAYIRFACVYKRFKDLGELEEAIKTIQ 147 >UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobacteria RepID=NRDR_SYNPX Length = 160 Score = 197 bits (502), Expect = 9e-50, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 89/147 (60%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP D++V++SR G SVRRRR+CL C RFTT+E E V V+K N RE Sbjct: 1 MQCPSYQNTDSRVLESRAADGGRSVRRRRECLNCEFRFTTYERVETVPITVIKRNGNREI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ RA EK + + +E + ++ +L+ REV S IG LV+ +LK++ Sbjct: 61 FSRSKLLHGLNRACEKTGLDASRLETLVEELELKLQQRSGREVSSAEIGELVLVELKQMS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVYR F+ I +F + + Sbjct: 121 EVAYIRFASVYRQFQGIDDFVSTLETM 147 >UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY15_ACIFD Length = 160 Score = 194 bits (495), Expect = 6e-49, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 2/147 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +V+++R+ +G+++RRRR+CL C RFTTFE V K + EP Sbjct: 1 MRCPFCGTNEDRVVETRVADDGAAIRRRRECLGCGRRFTTFERITEARVLVRKRSGQLEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KLR G+ AL+ RP+ + ++E + ++ +RA EV S +G V+E L++LD Sbjct: 61 FDRDKLRRGVQAALKNRPIGALEIERLLAEVEEAVRAVD--EVESAELGLRVLEGLRQLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F D +F +A L Sbjct: 119 PVAYVRFASVYQNFTDADDFRRVLADL 145 >UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseria RepID=NRDR_NEIMB Length = 154 Score = 192 bits (490), Expect = 2e-48, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 93/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V DSRL+ E ++VRRRR C C +RF T E AEL MP V+ + R P Sbjct: 1 MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETAELKMPAVIGPDKKRSP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN ++LR+ + A K ++ + ++ + + +L +G+R++PS + ++V+++L + D Sbjct: 61 FNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRDIPSAALADMVLKELLRQD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 A +RFA++++ F++ +F +A+ Sbjct: 121 TEAAVRFAALHKRFDNPADFASWLAQ 146 >UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG1_9BACT Length = 157 Score = 192 bits (488), Expect = 4e-48, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 92/148 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C KV+++RL + + +RRRRQC CN RF+T E V+KS +E Sbjct: 1 MRCPECSNTSNKVLETRLSKDRNILRRRRQCNSCNTRFSTQEEMVRGDLMVIKSGGRKED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +K+R G+ AL KRPV D + A+ +IK + +REV S IG +VM +LK+LD Sbjct: 61 FNIQKVREGLQLALRKRPVGDDAINEAVENIKLSVSDRLDREVFSHEIGEMVMIELKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+D EF E I ++ Sbjct: 121 EVAYVRFASVYREFKDASEFIETIQSMQ 148 >UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria RepID=NRDR_CHLAA Length = 166 Score = 190 bits (485), Expect = 7e-48, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 99/149 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC V+T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+ +E +N +++ + T E E+ S+ IG+ VM++L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSAAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVYR+F DI + E + L D Sbjct: 121 EVAYIRFASVYRAFTDIGKLREAVDELLD 149 >UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=A3VLS6_9RHOB Length = 145 Score = 188 bits (479), Expect = 4e-47, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 15 DSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRAL 74 DSR + ++RRRR C C RFTT+E +L V+KSN RE F+ EKL + ++ Sbjct: 3 DSRPAEDHVAIRRRRFCPACGGRFTTYERVQLRDLVVIKSNGRREDFDREKLERSIRISM 62 Query: 75 EKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSF 134 +KRPV + ++ I+ I +L + GE ++PSK IG +VME L ++D VAY+RFASVY++F Sbjct: 63 QKRPVEPERIDQMISGIVRRLESMGETDIPSKTIGEIVMESLARIDTVAYVRFASVYKNF 122 Query: 135 EDIKEFGEEIARLE 148 + +F + ++ L Sbjct: 123 QAADDFEKFMSELR 136 >UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFP5_MEIRU Length = 161 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 55/136 (40%), Positives = 84/136 (61%), Gaps = 3/136 (2%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSR EGS +RRRR+C VC RFTT+E A++ V+K + +E F+ KL G+ Sbjct: 1 MLDSRPSDEGSVIRRRRECPVCKRRFTTYERAQVEPLLVIKRSGRKETFDPNKLLRGLSL 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYR 132 A KRP+ + ++ + ++ E E+ S+ IG + LK+LD VAYIRFASVYR Sbjct: 61 AARKRPIDPEVLQEFAFGFEDTVK---EMEITSEEIGLRSLAFLKELDPVAYIRFASVYR 117 Query: 133 SFEDIKEFGEEIARLE 148 F+ ++ F EE+ +L+ Sbjct: 118 EFDSLENFIEEVRKLD 133 >UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZR79_9FIRM Length = 121 Score = 175 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 48/119 (40%), Positives = 76/119 (63%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C +RFTT+E E + V+K + RE ++ K++ G+LRA KRP+ + +E ++ Sbjct: 2 CESCGKRFTTYEKVETIPLSVIKKDQTREQYDRSKIQGGILRACYKRPIPVEKIESLMDS 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 I+ + T ++E+ S IG +VME LK LD VAY+RFASVYR F+D+ F +E+ + + Sbjct: 62 IEGDIFDTADKEISSTRIGEIVMEHLKDLDAVAYVRFASVYREFKDVSTFMDELKKFME 120 >UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698138 Length = 122 Score = 174 bits (442), Expect = 9e-43, Method: Composition-based stats. Identities = 72/116 (62%), Positives = 94/116 (81%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSRL G+G +RRRRQC C ERFTT+E AEL MP+VVK + R PF+E+KLR+GM R Sbjct: 1 MVDSRLSGDGDQIRRRRQCSTCKERFTTYETAELNMPQVVKQDGSRVPFDEDKLRAGMER 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFA 128 ALEKRPVS++ V+ AI+HI +L GERE+PS IG+LVM++LK+LD+VAY+RFA Sbjct: 61 ALEKRPVSAERVDAAISHITRKLTTKGEREIPSLQIGDLVMDELKRLDQVAYVRFA 116 >UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9U3_9DELT Length = 235 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 71/118 (60%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C RFTT E + +P V+K R+PF+ K+R G+ A KR +SS+ ++ + Sbjct: 2 CNECGHRFTTRERIDETLPMVLKRTGERQPFDRNKIRRGLDIACRKRGISSEGLDRIVQQ 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 I++ G+RE+ S+ IG +M L LD+VAY+RF SVYRSF+ I EF + + ++ Sbjct: 62 IETWASTKGDREIDSEEIGERIMHHLYALDQVAYVRFVSVYRSFDSIAEFEQLLREMQ 119 >UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candidate division TM7 RepID=UPI00016B2574 Length = 155 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 56/137 (40%), Positives = 85/137 (62%) Query: 10 DTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSG 69 D+KV++SR +G+G ++RRRR+ L RFTT+E E V+K N RE F+ EKL Sbjct: 10 DSKVLESRELGDGKTIRRRRETLDGKCRFTTYERIERPDLSVIKKNSKRELFDREKLARA 69 Query: 70 MLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFAS 129 + +++ K S +VE IN + + GE EV S IG++V++ L K +++AY+RFAS Sbjct: 70 ISQSVGKFFTSEIEVEQIINETEEAIYNLGETEVLSSAIGDIVLDILAKKNEIAYVRFAS 129 Query: 130 VYRSFEDIKEFGEEIAR 146 VYR F+ + EF +A Sbjct: 130 VYRDFKTLDEFENILAA 146 >UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEJ6_9ACTN Length = 118 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 50/117 (42%), Positives = 72/117 (61%), Gaps = 1/117 (0%) Query: 33 VCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHI 91 C RFTT+E VVK++ + FN EKL G+ A KRP + +D I+ I Sbjct: 2 KCGNRFTTYERLGDNPLIVVKADGSSQVFNREKLYRGISIACAKRPNIPNDKKTEIIDAI 61 Query: 92 KSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 ++ LR +G E+ SK +G++V+E LK LD VAYIRFASVY+ F+ I+EF + + L+ Sbjct: 62 ETALRNSGRAEINSKDLGDMVLEHLKPLDDVAYIRFASVYKDFQSIEEFQDALKGLK 118 >UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGT6_HALO1 Length = 164 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 4/132 (3%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + D++V+DSR +G VRRRRQC C RFTT+E A +V+K ++ E Sbjct: 1 MQCPYCGS-DSQVLDSRGNADG--VRRRRQCNACRRRFTTYERAGAPSLKVIKRSERVEG 57 Query: 61 FNEEKLRSGMLRALEKR-PVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ +KL+ + R R +S+ D+ I+++L + V S I +L + +L + Sbjct: 58 FDSDKLQRALERVCRGRSAISASDIRRIARDIEAELVDASAKSVHSGQIVDLALRRLADI 117 Query: 120 DKVAYIRFASVY 131 D++AY R A Y Sbjct: 118 DRIAYNRLAVNY 129 >UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0PDU3_9FIRM Length = 118 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 68/106 (64%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 E V+K + RE F+ KL +G++RA EKRPV +E A+ I+ L + ++EV Sbjct: 2 IETTPLVVIKKDKSREGFDSGKLLAGLVRACEKRPVPLGILEDAVRDIEMMLHNSLDKEV 61 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 PS IG L ME+L+ +D+VAY+RFASVYR F+DI F +E+ L + Sbjct: 62 PSYRIGELAMEKLRAIDEVAYVRFASVYRQFKDIDSFMKELQSLLE 107 >UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DU07_EIKCO Length = 106 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 76/101 (75%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 MP+++K+N R F+ KL++ + RAL KRP+S++ +E ++ I+ L TG +EVPS++ Sbjct: 1 MPQIIKNNGERVMFDPLKLQTSLQRALHKRPISAEAIEHTVHEIEECLYKTGSKEVPSRL 60 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 IG LVME+L KLD+VAY+RFASVY+SF+D+ EF +A LE Sbjct: 61 IGELVMERLAKLDQVAYVRFASVYKSFKDVAEFTRTVAGLE 101 >UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6G3_9ACTN Length = 104 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 69/102 (67%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + +EPF+ EKLR G++ A KR + + + I+ I+++LR G+ E+ S+ Sbjct: 2 PILVIKKDGTKEPFSHEKLRRGLVAATIKRSIDLNRINQLIDSIETELRDNGKTEITSQE 61 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 IG V+++L +DKVAY+RFASVYR F+D++EF EE+ L + Sbjct: 62 IGMRVLQKLIDIDKVAYVRFASVYRDFKDVEEFSEELRSLSN 103 >UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia alni ACN14a RepID=Q0RDY4_FRAAA Length = 224 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 67/105 (63%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 E RV+K + V EPF+ K+ +G+ +A + RPV DD+ + ++ +R++G EV Sbjct: 1 MEEASLRVLKRSGVAEPFSRAKVITGVRKACQGRPVRDDDLALLAQRVEDAVRSSGSAEV 60 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 P++ IG ++ L++LD+VAY+RFASVY +FE + +F IA L Sbjct: 61 PAEAIGRAILGPLRELDEVAYLRFASVYLAFESLGDFENAIAALR 105 >UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UCB8_9RHOB Length = 116 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 41/102 (40%), Positives = 66/102 (64%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 +L V+KS+ RE F+ +KL +L A +KR + + VE I+ I +L + G+ +V Sbjct: 1 MQLRDLHVIKSDGKREGFDRDKLARSVLLASQKRAIERERVEQMISGIVRRLESRGDPDV 60 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIA 145 P+ +IG LVM+ L+ LD VAY+R+ASVY+ F+++ +F E I Sbjct: 61 PASVIGELVMDGLRNLDTVAYVRYASVYKDFQEVDDFSEFIK 102 >UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL66_9FIRM Length = 104 Score = 131 bits (330), Expect = 9e-30, Method: Composition-based stats. Identities = 43/87 (49%), Positives = 66/87 (75%) Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+G++RA EKR +SS +E +N ++ +R ++EVP+++IGNL+ME+L+KLD Sbjct: 2 FDRNKLRNGLVRACEKRNISSRQIEEIVNSVERTVRNELKQEVPTEVIGNLIMEELRKLD 61 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F+D+ F E+ L Sbjct: 62 QVAYVRFASVYREFKDLSSFMSELETL 88 >UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019030D6 Length = 120 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 39 TTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT 98 TTFE +L + + + F + + AL KRPV D +E A++ I S+L ++ Sbjct: 1 TTFERVQLRRADGHQEDGPQGAFRSRQAGALFEVALRKRPVERDRIERAVSGIVSRLESS 60 Query: 99 GEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARL 147 GE E+ S+ IG V+E +K LD V ++R+ASVYR F ++F + I+ + Sbjct: 61 GETEISSEQIGLQVLEAMKSLDDVGFVRYASVYRDFSLAEDFEKVISEI 109 >UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia RepID=B4D972_9BACT Length = 97 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 57/82 (69%) Query: 67 RSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIR 126 GM++A EKRPVS + +E + I +L RE+PS +IG VM++L +LD+VAY+R Sbjct: 2 LGGMIKACEKRPVSIEVLEKSAEEIVQELETEFRREIPSNVIGAKVMDKLHQLDEVAYVR 61 Query: 127 FASVYRSFEDIKEFGEEIARLE 148 +ASVYR F+DI EF EEI LE Sbjct: 62 YASVYRHFQDIGEFLEEIQSLE 83 >UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent to dnaB in Bacillus subtilis (Fragment) n=1 Tax=Mycobacterium tuberculosis RepID=Q50818_MYCTU Length = 143 Score = 103 bits (257), Expect = 2e-21, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 42/70 (60%) Query: 79 VSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK 138 V D + + ++ +RA G E+PS +G ++ L++LD+VAY+RFASVYRSF Sbjct: 1 VDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSAD 60 Query: 139 EFGEEIARLE 148 +F EI L Sbjct: 61 DFAREIEALR 70 >UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8P3_9ACTN Length = 78 Score = 98.9 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 51/78 (65%) Query: 71 LRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASV 130 +RA KR + ++ I+ I+ +LR + S IG++V+++L+++DKVAYIRFASV Sbjct: 1 MRATSKRDIDLSELNALIDDIERELRGGTLTAIRSHDIGDMVLKRLERIDKVAYIRFASV 60 Query: 131 YRSFEDIKEFGEEIARLE 148 YR F D+ EF E+ +L Sbjct: 61 YRDFRDVDEFISELDKLR 78 >UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZR2_9AQUI Length = 88 Score = 97.4 bits (242), Expect = 1e-19, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 46/78 (58%) Query: 71 LRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASV 130 + A + RPVS E I+ L G+ V S IG+LV ++LKKLD ++YIRF SV Sbjct: 1 MLAAKNRPVSQKQAEEIAEDIEKYLIDEGKLLVESTEIGDLVQQRLKKLDIISYIRFKSV 60 Query: 131 YRSFEDIKEFGEEIARLE 148 Y F+D+K+F + + + Sbjct: 61 YNEFKDLKDFQKTLEEFQ 78 >UniRef50_UPI0000393417 COG1327: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains n=1 Tax=Bifidobacterium longum DJO10A RepID=UPI0000393417 Length = 93 Score = 87.7 bits (217), Expect = 1e-16, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 44/67 (65%) Query: 67 RSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIR 126 SG+ +A + RPV +D+++ ++ LR+ G EV S +G +++ L+ LD VAY+R Sbjct: 2 ISGVRKACQGRPVREEDLKLLGQKVEEDLRSRGLAEVTSDEVGKAILKPLRDLDVVAYLR 61 Query: 127 FASVYRS 133 FASVY++ Sbjct: 62 FASVYQN 68 >UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsiella grylli RepID=A8PM40_9COXI Length = 69 Score = 65.4 bits (159), Expect = 5e-10, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 1 MHC--PFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFE 42 M C P C T+VI+SR EG + RRR C CN+R+T+ E Sbjct: 1 MKCLNPHCDYAKTRVINSRKTEEGKKILRRRHCPKCNKRYTSIE 44 >UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Bacteria RepID=B2RKM0_PORG3 Length = 798 Score = 62.3 bits (151), Expect = 5e-09, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 10/100 (10%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSD--DVEMAINHIKSQLRATGER 101 E V+ R+VK + + F+ EK+R +++A V + ++ + + R +GE Sbjct: 1 MEEVILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGEL 60 Query: 102 EVPSKMIGNLVMEQLKKLDK-VA--YIRFASVYRSFEDIK 138 V + I + V E+L +L+ +A YI +YR + ++ Sbjct: 61 -VTVEQIQDRVEEELMRLNPFIAKKYI----IYREWRTVE 95 >UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylobacterium extorquens group RepID=B7KYT4_METC4 Length = 128 Score = 61.2 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 1 MHCPFCFAVDTKVIDSRL-VGEGSSVRRRRQCLVCNERFTTFE 42 M CP C + DT++IDSR + +RRRR+C+ C RF T E Sbjct: 1 MICPKC-SADTRLIDSRPHQDDAGVIRRRRKCVACGHRFFTQE 42 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 56.9 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 18/98 (18%) Query: 45 ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVP 104 E M V+K N +RE FN KL + + A P E + + SQ+ G+ EV Sbjct: 8 ERTMITVIKRNGLREEFNPVKLLNSLKLAGAPNP------ERILEEVTSQI--KGKGEVT 59 Query: 105 SKMIGNLV---MEQLKKLD----KVA--YIRFASVYRS 133 S I + V M L D A Y+ F S+Y+ Sbjct: 60 SSEISDSVQLMMLNLISEDFKWHDAARNYLLF-SIYKQ 96 >UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales RepID=A1RYY0_THEPD Length = 187 Score = 52.7 bits (126), Expect = 4e-06, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 +VVK + E F+ EKL M+ A + ++S++R + Sbjct: 2 PKKVVKRSGKVEEFDREKLVRSMVNA----GAPEEVAVEIAKEVESKVRDGA----TTDE 53 Query: 108 IGNLVMEQLKKLDKVAY 124 I V+ +LK L AY Sbjct: 54 IRRYVLARLKVLAPQAY 70 >UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BIL8_9FIRM Length = 706 Score = 52.3 bits (125), Expect = 5e-06, Method: Composition-based stats. Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 14/111 (12%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRP---VSSDDVEMAINHIKSQLRATGEREVP 104 M +V+K + + FN++K+ + +A+ P + I+ R+ +RE+ Sbjct: 1 MLQVIKRDGTKVDFNKDKITIAIEKAMH-SPSGIYVEGQAAEIASEIEE--RSKNKREIS 57 Query: 105 SKMIGNLVMEQLKKLDKVA----YIRFASV--YRSFEDIKEFGEEIARLED 149 I +LV +L A Y + SV Y+ ++ + +EI L + Sbjct: 58 IYEIEDLVYYKLIDRKNPATAKSYESYKSVQAYKREQNTSD--DEIIGLLN 106 >UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase n=24 Tax=Bacteria RepID=A6L0X1_BACV8 Length = 758 Score = 51.1 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 46/92 (50%), Gaps = 10/92 (10%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATG-EREVPSKMIG 109 ++K + RE F+ K+++ + +A + ++ + I I ++ + + + I Sbjct: 8 IIKRDGKREDFSISKIKNAIGKAFHASGIDNE--DKLIAEITMRVISNFVSPTISVEEIQ 65 Query: 110 NLVMEQLKKL-DKVA--YIRFASVYRSFEDIK 138 +LV ++L K+ +VA YI +YR + + + Sbjct: 66 DLVEKELMKVRPEVAKKYI----IYREWRNTE 93 >UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobacter RepID=B0KB73_THEP3 Length = 85 Score = 50.8 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 37/71 (52%), Gaps = 2/71 (2%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 +V+K + + F+ +K+ + A + +P+++ D+ I+ ++ G+ ++ Sbjct: 2 KVIKRDGRLQEFDLDKIIRSIGAASDDAGKPLNTSDLHNIARDIEKSIKKLGKEQISFDE 61 Query: 108 IGNLVMEQLKK 118 I +V++ L+K Sbjct: 62 IRTIVIDALEK 72 >UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Streptococcus RepID=A5M517_STRPN Length = 185 Score = 49.2 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 43/106 (40%), Gaps = 8/106 (7%) Query: 42 EVAELVM-PRVVKSNDVREPFNEEKLRSGMLRALEK----RPVSSDDVEMAINHIKSQLR 96 E ++ V K + R F+ +K+ + +A +K P+ + I +++ Sbjct: 6 EKITILPTLFVEKRDGRRVVFDVDKIDKALHKAADKVIDVTPLVEKRLNDLTERIITEIH 65 Query: 97 ATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGE 142 + + + I N+V +L + + A A Y ++ ++F Sbjct: 66 SRFPQGIKIYEIQNIVEHELLEAKEYA---LAEEYITYRTQRDFER 108 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 49.2 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 26/99 (26%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRA-------------LEKRPVSSDDVEMAINHIKSQLR 96 V+K +D + F+ K+ + + +A L KR E + I ++ Sbjct: 4 VVIKRDDSKVDFDRTKIENAVFKAYKSVYDSNVKEAELRKRA------ENSTTDIVKEIE 57 Query: 97 ATGEREVPSKMIGNLVMEQLKKLDK-VA--YIRFASVYR 132 ATG++E+ + I ++V + L D+ VA YI +YR Sbjct: 58 ATGKKEIRVEEIQDIVEKVLMLKDQTVAKSYI----LYR 92 >UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit n=156 Tax=Bacteria RepID=Q032I4_LACLS Length = 747 Score = 48.8 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 34/79 (43%), Gaps = 1/79 (1%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVS-SDDVEMAINHIKSQLRATG 99 ++ L V+K + FN EK+ + +A +K ++ + + + S++ Sbjct: 7 YQDVTLEEINVIKRDGRSVKFNSEKIFDALTKAAKKVELTDMSVLSELTDRVVSEIFTRF 66 Query: 100 EREVPSKMIGNLVMEQLKK 118 V I ++V ++L + Sbjct: 67 SENVKIYEIQSIVEQELLE 85 >UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SNH7_9EURY Length = 937 Score = 48.4 bits (115), Expect = 7e-05, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 11/83 (13%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGER 101 E V+K + +E FN KL ++ + V+ D++ I+ + +++ Sbjct: 9 EKVME--LYVIKRDKRKEKFNVNKLAKSLINS----GVNYGDLDQIISEVCTKVYNG--- 59 Query: 102 EVPSKMIGNLVMEQLKKLDK-VA 123 + + + ++V LKK+DK VA Sbjct: 60 -ITTDELKDVVYNILKKIDKDVA 81 >UniRef50_A3CYA4 Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CYA4_METMJ Length = 95 Score = 47.7 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 8/75 (10%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 V K+N+ E FN +K+R + A + + I Q++ + + + I Sbjct: 15 MVRKTNNQEEQFNPDKIRRSVQNAGAN--------QQLADEITQQIQGSTHSGMTTTEID 66 Query: 110 NLVMEQLKKLDKVAY 124 N V + LK+ D AY Sbjct: 67 NSVQDILKQKDMDAY 81 >UniRef50_B2VQ43 Putative uncharacterized protein n=2 Tax=unclassified Caudovirales RepID=B2VQ43_9CAUD Length = 60 Score = 46.9 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA 44 M CP C TKV+D R + V+RRR+C C RF T E Sbjct: 1 MRCPICG-GRTKVLDVR--EKRDKVKRRRECSDCLTRFNTEEKL 41 >UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate reductase n=3 Tax=Fusobacterium RepID=UPI0001BC56DE Length = 750 Score = 46.9 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 35/77 (45%), Gaps = 6/77 (7%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEK--RPVSSDDVEMAINHIKSQLRATG 99 E +V+K + F+ +++ + + A ++ R + E ++ I Q+ Sbjct: 12 ERGNFYGKKVIKRDGTVIDFDAQRIVNAISMAFKQHSRVIP----EELVSKIAHQIENLE 67 Query: 100 EREVPSKMIGNLVMEQL 116 + + + I +LV+++L Sbjct: 68 NKIMSVEEIQDLVVKKL 84 >UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCA1_FUSMR Length = 729 Score = 46.1 bits (109), Expect = 3e-04, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M V+K + F+ +++ M A ++ + + + I +Q+ + + + Sbjct: 1 MKEVIKRDGAIVEFDRDRIVRAMTMAFKQSSGTVN--NELVEKITTQIENMDNKRMHVED 58 Query: 108 IGNLVMEQLKKLDK----VAY 124 I ++V+++L + +AY Sbjct: 59 IQDIVVKKLMASSEKDIAIAY 79 >UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7E4_KORCO Length = 115 Score = 45.4 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 9/81 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 +V K N E F++ K+ S +++A S + + +S+ R G V S I Sbjct: 33 KVRKRNGKEEDFSKMKIVSALIKA----GSSVELADKIAEECESKFR--GREYVESSEIR 86 Query: 110 NLVMEQLKKLDKVAY---IRF 127 V+ +LK+++K +Y +RF Sbjct: 87 EFVLSRLKEVEKDSYENWLRF 107 >UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y832_METJA Length = 1750 Score = 45.4 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 11/83 (13%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGER 101 E V+K + +E FN KL ++ + V+ D++ I+ + +++ Sbjct: 9 EKVME--FYVIKRDKRKEKFNVNKLAKSLINS----GVNYGDLDTIISEVCAKVYNG--- 59 Query: 102 EVPSKMIGNLVMEQLKKLDK-VA 123 + + + ++V LKK+DK VA Sbjct: 60 -ITTDELKDIVYNVLKKIDKDVA 81 >UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase n=36 Tax=Clostridium RepID=A5HXZ1_CLOBH Length = 713 Score = 45.0 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 8/91 (8%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMA--INHIKSQLRATGEREVPS 105 M VVK + + F+ K+ + + A E+ + E + ++ + + E+ Sbjct: 1 MLYVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQKVIKKIEDSNKEEISV 60 Query: 106 KMIGNLVMEQLKK--LDKVAYIRFA-SVYRS 133 + I NLV L ++ Y A S YR Sbjct: 61 EDIQNLVEHVLIDSGFKEIGY---AYSNYRR 88 >UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=Bacteria RepID=A9KQ95_CLOPH Length = 708 Score = 45.0 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 8/71 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE----KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 +VVK + ++ K+ + +A + K ++ D +E I I+ + T E Sbjct: 2 KVVKRDGRVTDYDRNKILVAIRKANDEVDPKEKITEDKIEAIILGIEHLKKDTMYVE--- 58 Query: 106 KMIGNLVMEQL 116 I +++ ++L Sbjct: 59 -EIQDMIEQKL 68 >UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB17_CLOBU Length = 91 Score = 44.6 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPV--SSDDVEMAINHIKSQLRATGEREVPSKM 107 V K +E F+ K+R + A + + D+ I++ ++A + E S Sbjct: 2 VVSKKTGKKEEFDISKVRRSIANAGSDCNIMLTESDLLNVCRMIENTMKAMEKEETSSYE 61 Query: 108 IGNLVMEQLKKLD--KV--AYIRFA 128 I LV+ +L++L+ +V +YIR A Sbjct: 62 IFGLVVFKLRELNYTEVVHSYIRGA 86 >UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase n=18 Tax=Bacteria RepID=C3RPW0_9MOLU Length = 718 Score = 44.6 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 V+ N+ + FN+ K+ S + ++ E + +S + + I + + E+P Sbjct: 2 ELIVIGKNNQHKKFNKNKILSAVQKSAERLNKSLSKEQEDRLIYLVLRNIENLQITEIPV 61 Query: 106 KMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK-EFGEEIARL 147 + +V L +DK A+ YR++ + K +F + + + Sbjct: 62 STMHKIVEVSLDDIDK----DIATSYRNYRNYKQDFVKMLDNV 100 >UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=A6LHE5_PARD8 Length = 735 Score = 44.2 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 VVK + FNEEK+ + + +A+ D I I + GE ++ + I Sbjct: 4 TVVKRDGRIVGFNEEKIVTAIRKAMLHTDKGEDM--QLIRQITDHISFKGEPQMTVEAIQ 61 Query: 110 NLVMEQLK--KLDKVA--YIRF---ASVYRSFEDIKEFGEEI 144 + V +L VA YI + SV R + F E I Sbjct: 62 DAVELELMASSRKDVAQKYIAYRNQRSVARKAKTRDMFLEII 103 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 44.2 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 20/106 (18%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEK-RPVS-----SDDVEMAINHIKSQLRA 97 + +VK N + PF+ ++ + A R + +D+E +I I Q+ Sbjct: 4 LQEKQCTIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVVK 63 Query: 98 TGEREVPS------KMIGNLVMEQLK--KLDKVA--YIRFASVYRS 133 +++ + I ++V QL L VA YI VYR Sbjct: 64 EVVQKITDGQVVTVERIQDMVESQLYVNGLQDVARDYI----VYRD 105 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 44.2 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 M +V+K N FN K+ + + +A+ K V + IK +++ + + Sbjct: 1 MIQVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKP-IHV 59 Query: 106 KMIGNLVMEQLKKLD--KVA--YIRFASVYRS 133 + I ++V L D VA YI +YR+ Sbjct: 60 EEIQDIVEMLLMSSDRKDVAKRYI----IYRN 87 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 44.2 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 10/90 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM- 107 +V+K + PF+E ++R + RA+ + V + ++ + +I ++ + ++P Sbjct: 5 KVMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRS 133 I ++V +L + L +V AYI +YR Sbjct: 65 IQDIVELELMRAGLFEVAKAYI----LYRK 90 >UniRef50_A7I025 Transcriptional repressor NrdR n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I025_CAMHC Length = 62 Score = 43.8 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA 44 M CP+C T VI +G R R+C C F+T E Sbjct: 1 MICPYCANEKTNVI---ATVKGLVNERFRKCPKCGRTFSTIEKI 41 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 43.8 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 10/71 (14%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV+K N EPF EKLR + RA + V D ER+V S Sbjct: 1 MYRVLKLNGSVEPFQPEKLRRSIERAAQDAGVEVDGAADI----------KVERDVGSWE 50 Query: 108 IGNLVMEQLKK 118 + +LV +L K Sbjct: 51 LADLVHVELLK 61 >UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAI5_FERPL Length = 261 Score = 43.8 bits (103), Expect = 0.002, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV K + E F+ K+ + + + + E + ++ +L + + Sbjct: 1 MVRVRKKDGRLEEFDRTKVL----KTCLRSGANVEIAEKVLRDVEERLYDG----ITTDE 52 Query: 108 IGNLVMEQLKK 118 I +V+E L K Sbjct: 53 ILEIVIESLLK 63 >UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridia RepID=B2A3V1_NATTJ Length = 736 Score = 43.4 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 13/96 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAIN---HIKSQLRATGEREVP 104 +VVK + +PF+ K+ + + +AL+ + +D +A++ + ++L G + Sbjct: 16 PTKVVKRDGREQPFDPSKITNAIKKALK--AIDKEDHSLALSLTYQVINKLTKHGVDKPT 73 Query: 105 SKMIGNLVMEQLKKLD--KV--AYIRFASVYRSFED 136 I +V L +V AY+ +YR+ D Sbjct: 74 VPQIQEMVENSLMDTGHYEVARAYV----IYRNDRD 105 >UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase n=29 Tax=Bacteria RepID=C4ZF10_EUBR3 Length = 746 Score = 43.4 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 12/71 (16%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRA----LEKRPVSSDDVEMAINHIKSQLRATGEREVPS 105 +++K + + F+ K+ + + +A L+ +++D +E +++++ +R Sbjct: 13 KIIKRSGSEDIFDAAKIVAAIRKANDSVLDYEKLTADQIEEIASNVETACENM-KRSPSV 71 Query: 106 KMIGNLVMEQL 116 + I ++V QL Sbjct: 72 EEIQDMVENQL 82 >UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=B6WBR4_9FIRM Length = 130 Score = 43.1 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 2/79 (2%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSS--DDVEMAINHIKSQLRATG 99 E V K N E F+ EK+ + A + D+ + N ++ ++ Sbjct: 35 ENFLDNKLYVKKRNGKIELFDVEKISRSIKNAARNGNIELNTSDISILKNDLEKIIKKNH 94 Query: 100 EREVPSKMIGNLVMEQLKK 118 R +P+ I V L++ Sbjct: 95 HRILPTATIKEYVENILEE 113 >UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=C7RFT0_ANAPD Length = 132 Score = 42.7 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 51 VVKSNDVREPFNEEKLRSGMLRAL--EKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 V+K + E F+++K+ + A EK +++ D+ + ++ + L + + + I Sbjct: 46 VIKRSGSVEKFSKDKIERSIKNAAGDEKAAMNTSDLAIIVDDVLDTLDSDPRKVYKTSEI 105 Query: 109 GNLVMEQLKK 118 N + + L K Sbjct: 106 KNYIKDSLLK 115 >UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=cellular organisms RepID=B3EQU4_CHLPB Length = 730 Score = 42.7 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 8/86 (9%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPS-KM 107 +++K + FN EK+ + RAL + + L A +E PS + Sbjct: 12 KIIKRDGKVVSFNREKITFALFRALRATGNPDRQYAAELSAQVVASLEAKRAKEPPSVEE 71 Query: 108 IGNLVMEQLKK---LDKV-AYI--RF 127 I ++V + L + D AYI RF Sbjct: 72 IQDVVEKVLFENCAFDAAKAYIIYRF 97 >UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase n=182 Tax=root RepID=NRDD_HAEIN Length = 707 Score = 42.7 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 44/107 (41%), Gaps = 14/107 (13%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSD-DVEMAINHIKSQLRATGEREVPSKMIG 109 V+K + R F +++ + + +A +S + + +++ + E+ I Sbjct: 6 VIKRDGSRAEFEIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFTRHQGEIDINQIQ 65 Query: 110 NLVMEQLK--KLDKV--AYIRFASVYRSFEDIK-----EFGEEIARL 147 +V ++L + +V AYI YR D+ + +EI L Sbjct: 66 KIVEDKLMASRYPEVARAYIE----YRHDRDLAREKRSQLTKEIEGL 108 >UniRef50_A3CW86 Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CW86_METMJ Length = 102 Score = 41.9 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 10/81 (12%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGE 100 EV ELV VVK++ REPF EK + + K ++ ++ Sbjct: 6 LEVIELVD--VVKADGRREPFVREK----VTVSALKSGAPPEEARAIGEAVERIAYDG-- 57 Query: 101 REVPSKMIGNLVMEQLKKLDK 121 +PS I V+EQL + Sbjct: 58 --MPSGEIRRRVLEQLHDRNP 76 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 41.5 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 15/93 (16%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRAL----EKRPVSSDDV-EMAINHIKSQLRATGEREVP 104 ++ K + PFN EK+ + + +A+ EK +++ + + + ++ L+ +V Sbjct: 4 KIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIPDV- 62 Query: 105 SKMIGNLVMEQLKK--LDKV--AYIRFASVYRS 133 + I ++V +L + L +V AYI +YR Sbjct: 63 -EQIQDIVERKLIEAGLARVAKAYI----LYRQ 90 >UniRef50_A4CGY5 Putative uncharacterized protein n=3 Tax=Bacteroidetes RepID=A4CGY5_9FLAO Length = 283 Score = 41.1 bits (96), Expect = 0.012, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +V K + E F+ KL + + R+ V V+ + ++ + + +K I Sbjct: 4 IQVKKYSGEMEAFDMNKLVNSLRRS----QVDESLVQQIAHEVEGNIEDG----MTTKKI 55 Query: 109 GNLVMEQLKKLDKVAYIRFASVYR 132 + LK +V+ AS Y+ Sbjct: 56 YQMAFRMLKSRARVS----ASRYK 75 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 40.7 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM- 107 +V+K + PF+E ++R + RA+ + V + ++ + + ++ + ++P Sbjct: 5 KVMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L V AYI +YR + E EE ++ + Sbjct: 65 IQDIVELELMRNGLFDVAKAYI----LYRKKK--AEIREEKKKILN 104 >UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase n=10 Tax=Fusobacterium RepID=Q7P4N7_FUSNV Length = 728 Score = 40.0 bits (93), Expect = 0.022, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV+K + F++ ++ + + + E+ S + I I SQ+ ++ + + Sbjct: 1 MKRVIKRDGSVVEFDKSRIINAIKKTFEQ--ASREPNMKLIEKIASQVEDLPDKVLAVEQ 58 Query: 108 IGNLVMEQL 116 I ++V+++L Sbjct: 59 IQDIVVKKL 67 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 40.0 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 11/83 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 VVK + +EP++ ++ + A + + V + ++ L + ++ Sbjct: 2 SITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASELEITLFDG----ITTQQ 57 Query: 108 IGNLV----MEQLKK---LDKVA 123 + V ++ +K D VA Sbjct: 58 LDEAVIQVALQNVKDDPAFDTVA 80 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 40.0 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 17/39 (43%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAIN 89 V+K + +E + K+R + A E V ++E Sbjct: 5 VIKRSGRKEKLDINKIRIAIKFACEGLNVDPLELEADAQ 43 >UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE54_CLOBO Length = 705 Score = 40.0 bits (93), Expect = 0.026, Method: Composition-based stats. Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + FN ++ + + A++ K+ + D N I + ++ + Sbjct: 4 TVIKRDGREVEFNINRIVNAIELAMKDTKQGIEKDLSVHIANDI----SEINKDKITVEE 59 Query: 108 IGNLVMEQLKK 118 I +LV ++L Sbjct: 60 IQDLVEDKLMD 70 >UniRef50_B2A0Y5 Putative uncharacterized protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A0Y5_NATTJ Length = 424 Score = 39.6 bits (92), Expect = 0.029, Method: Composition-based stats. Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 6/43 (13%) Query: 110 NLVMEQLKKLDKVAYIRFASVYRSFE---DIKEFGEEIARLED 149 +ME L+ L V+Y+ SVY +FE D+KEF + LED Sbjct: 227 EKMMEHLESLSPVSYV---SVYLTFEEDMDLKEFAKMKLELED 266 >UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Bacteria RepID=D0WIV3_9ACTN Length = 740 Score = 39.2 bits (91), Expect = 0.039, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP----VSSDDVEMAINHIKSQLRATGEREVPS 105 +++K N F+ K+ + + A + P ++ + A ++ G V Sbjct: 2 KIIKRNGSEVEFDISKIENAITAANAEVPAAQRLTDRQISYASQNVADACAEAGHA-VSV 60 Query: 106 KMIGNLVMEQLKKLD--KVA--YIRFASVYR 132 + I +LV +++ KLD +VA YI +YR Sbjct: 61 EEIQDLVEDEIMKLDRFEVARKYI----IYR 87 >UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B1YDP3_THENV Length = 91 Score = 39.2 bits (91), Expect = 0.041, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 6/74 (8%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M +VVK + E F EK+ +L+A PV ++ + V ++ Sbjct: 1 MVKVVKRDGRTEEFIPEKIVVSVLKA--GAPVDVAR--KIARKVECAVMEREN--VTAQE 54 Query: 108 IGNLVMEQLKKLDK 121 + +++ +LKK ++ Sbjct: 55 LTRMILAELKKANE 68 >UniRef50_UPI0001BCE5C3 transcriptional repressor NrdR n=3 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCE5C3 Length = 61 Score = 39.2 bits (91), Expect = 0.046, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMP 49 M CPFC T+V+ +G RR R C C + F T E + Sbjct: 1 MICPFCANDKTRVV---ATIKGLENRRFRYCFKCKKTFETSESVLIKEL 46 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 38.8 bits (90), Expect = 0.047, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPS 105 L +V+K + + F EK+ S + V + + +N +++ ++ + + Sbjct: 10 LRKIKVIKRDGRVDEFKLEKILSKLS------SVPDEVTDGIVNDVQANVKDNA---IDT 60 Query: 106 KMIGNLVMEQLKK 118 + I ++V L + Sbjct: 61 RAIADIVERNLIE 73 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 38.8 bits (90), Expect = 0.048, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 11/81 (13%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPV-SSDDVEMAI---------NHIKSQLRATGE 100 V K N EPF+ K+ + A++ V S + ++ AI + I+ L Sbjct: 3 VTKRNGATEPFSPSKIEKAVNWAVDGTSVESQEVIDKAILLIYDGIKTSDIQQALIKGAA 62 Query: 101 REVP-SKMIGNLVMEQLKKLD 120 + V +K +LV +L LD Sbjct: 63 KLVSATKADASLVSARLLLLD 83 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 38.8 bits (90), Expect = 0.055, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 17/98 (17%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRA------TG 99 + + +VVK + F+ ++R + A+ R V D E ++ + + + Sbjct: 1 MRVTKVVKRDGRVVEFDSFRIRRAIEMAM--REVGKFD-EAILDKVVKYVLDVIDSTFSD 57 Query: 100 EREVPSKMIGNLVMEQLKKLD--KV--AYIRFASVYRS 133 ER + I ++V L K D +V AYI VYR Sbjct: 58 ERPPHVEEIQDIVELALMKYDLFEVAKAYI----VYRK 91 >UniRef50_D0L6F0 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L6F0_GORB4 Length = 182 Score = 38.4 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 10/61 (16%) Query: 3 CPFCFAVDTKVIDSRLVGEGSS-VRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPF 61 CP C KVIDSRL G + + R RQ RFTT AE+ R K++ R F Sbjct: 110 CPACSTTGVKVIDSRLAPSGRAELARSRQ------RFTT---AEVEKARDRKTSASRAAF 160 Query: 62 N 62 + Sbjct: 161 D 161 >UniRef50_B7JWC1 Transposase IS204/IS1001/IS1096/IS1165 family protein n=37 Tax=Cyanobacteria RepID=B7JWC1_CYAP8 Length = 408 Score = 38.4 bits (89), Expect = 0.079, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 34/139 (24%) Query: 3 CPFCFAVDTKV-----IDSRLVGEG-SSV-----RRRRQCLVCNERFTTFEVAELVMPRV 51 C +C + KV + R + G SV RR+ +C C ++FT E + Sbjct: 45 CIYCGSKTRKVHQNNELTIRDLPWGEKSVYLKINRRQMRCEHCQKKFT--EELSYLP--- 99 Query: 52 VKSNDVREPFNEEKLR-----SGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSK 106 K E F +K+ S + ++ VS ++E + + L RE Sbjct: 100 -KKRTYTERF-RKKIIEEVLNSDIKNVAKRNGVSEQEIETMLKDVGEDLNQEKPRE---- 153 Query: 107 MIGNLVMEQLKKLDKVAYI 125 + +L +D++A I Sbjct: 154 ------LRRL-GIDEIAVI 165 >UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostridium RepID=Q0SSR4_CLOPS Length = 89 Score = 38.0 bits (88), Expect = 0.086, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLR--ATGEREVPSK 106 ++K + E F EKL + + A ++ D+ + ++ L+ E S Sbjct: 3 IIKKDGRIEEFKIEKLSTSLSNAASDLNFTLNKSDINIIAKDVEETLKKIRKDNGETSSY 62 Query: 107 MIGNLVMEQLK--KLDKV--AYIRF 127 + +V++ LK K V AY+++ Sbjct: 63 EVIGVVIDTLKNEKFSDVLRAYVKY 87 >UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate reductase n=3 Tax=Listeria monocytogenes RepID=UPI0001B41CA5 Length = 180 Score = 38.0 bits (88), Expect = 0.088, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 45 ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREV 103 +L V+K + + F+ K+R+ + +++ + + +E + + S+L + + Sbjct: 5 QLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPNKADMTI 64 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 38.0 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 23/82 (28%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-----------------------VEM 86 +V+K + PF+ E++R + RA+ + V D +E Sbjct: 5 KVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHIEN 64 Query: 87 AINHIKSQLRATGEREVPSKMI 108 + ++ +L G EV I Sbjct: 65 IQDIVELELMRAGLFEVAKAYI 86 >UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Methanococcales RepID=A4FZY4_METM5 Length = 791 Score = 38.0 bits (88), Expect = 0.089, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRA 97 VVK + E FN KL +L + V ++++ ++ I S++ Sbjct: 33 INVVKRSGNEELFNVNKLVKSLLNS----GVDYENIDAILSEIYSKVYN 77 >UniRef50_A8ZMX8 Putative uncharacterized protein n=5 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMX8_ACAM1 Length = 134 Score = 38.0 bits (88), Expect = 0.091, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 7/52 (13%) Query: 1 MHCPFCFAVDT--KVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPR 50 M CP+C + + DS + +G+ V+R QC CN RF E M R Sbjct: 1 MECPYCQSEKILKRGFDS--LQDGTLVQRY-QCKDCNRRFN--ERTGTPMAR 47 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria ... 219 3e-56 UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria... 216 2e-55 UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria ... 216 2e-55 UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C... 216 2e-55 UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria... 215 3e-55 UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria... 215 3e-55 UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinob... 211 4e-54 UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteri... 211 5e-54 UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteoba... 211 6e-54 UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammapro... 210 1e-53 UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteoba... 209 3e-53 UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema... 209 3e-53 UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 208 4e-53 UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteoba... 208 4e-53 UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostri... 208 6e-53 UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=... 207 9e-53 UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicut... 206 1e-52 UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria ... 206 2e-52 UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria ... 206 3e-52 UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteob... 204 5e-52 UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepI... 204 9e-52 UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria... 204 9e-52 UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostrid... 203 1e-51 UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria... 203 1e-51 UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=... 203 1e-51 UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria ... 202 3e-51 UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chlorofle... 201 6e-51 UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinom... 201 6e-51 UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteri... 201 7e-51 UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 201 7e-51 UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria ... 201 8e-51 UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria ... 200 1e-50 UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholde... 200 1e-50 UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteoba... 199 2e-50 UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomi... 199 2e-50 UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria... 199 3e-50 UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococc... 198 4e-50 UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomy... 198 5e-50 UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogeno... 196 1e-49 UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus... 196 1e-49 UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasm... 196 2e-49 UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaprot... 196 2e-49 UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae... 196 3e-49 UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria... 195 3e-49 UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum te... 195 4e-49 UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptoc... 194 8e-49 UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae... 192 2e-48 UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacte... 192 3e-48 UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ru... 191 5e-48 UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermans... 190 1e-47 UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomyc... 189 2e-47 UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopire... 188 5e-47 UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidob... 187 8e-47 UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacteri... 185 3e-46 UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae... 185 3e-46 UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobac... 185 3e-46 UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocycl... 184 5e-46 UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria... 184 1e-45 UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimo... 183 2e-45 UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neoricket... 182 3e-45 UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium f... 181 5e-45 UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisp... 181 7e-45 UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydi... 179 2e-44 UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria... 179 3e-44 UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphapr... 176 2e-43 UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseri... 173 2e-42 UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiotherm... 171 7e-42 UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminoc... 161 7e-39 UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesioc... 161 9e-39 UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=En... 160 1e-38 UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candida... 157 8e-38 UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 ... 152 3e-36 UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteri... 141 6e-33 UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochra... 137 7e-32 UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenel... 135 5e-31 UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=At... 134 1e-30 UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia... 133 2e-30 UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanic... 125 3e-28 UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470... 120 9e-27 UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia ... 107 1e-22 UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rh... 105 3e-22 UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent t... 99 6e-20 UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collins... 93 2e-18 UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydroge... 91 1e-17 UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase ... 85 7e-16 UniRef50_UPI0000393417 COG1327: Predicted transcriptional regula... 82 6e-15 UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n... 81 9e-15 UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase ... 81 1e-14 UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase ... 78 9e-14 UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase ... 76 4e-13 UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase ... 76 4e-13 UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylc... 74 2e-12 UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase ... 73 3e-12 UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucl... 72 6e-12 UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Cal... 72 6e-12 UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase ... 69 6e-11 UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 69 6e-11 UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyr... 68 8e-11 UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsi... 68 1e-10 UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate red... 67 1e-10 UniRef50_A3CYA4 Putative uncharacterized protein n=1 Tax=Methano... 65 9e-10 UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase ... 64 1e-09 UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alp... 64 1e-09 UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobact... 64 2e-09 UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylo... 64 2e-09 UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales ... 64 2e-09 UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase ... 63 2e-09 UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate r... 63 2e-09 UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyr... 61 1e-08 UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y... 61 1e-08 UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korar... 59 4e-08 UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus pla... 55 5e-07 UniRef50_A7I025 Transcriptional repressor NrdR n=1 Tax=Campyloba... 55 9e-07 UniRef50_B2VQ43 Putative uncharacterized protein n=2 Tax=unclass... 49 4e-05 Sequences not found previously or not previously below threshold: UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=The... 65 7e-10 UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase ... 64 1e-09 UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Can... 62 5e-09 UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase ... 61 1e-08 UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=The... 60 1e-08 UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Acidu... 60 2e-08 UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase ... 60 2e-08 UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase ... 60 2e-08 UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase ... 60 2e-08 UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hyd... 60 2e-08 UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase ... 57 1e-07 UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase ... 57 2e-07 UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=The... 57 2e-07 UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase ... 57 3e-07 UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase ... 56 4e-07 UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=The... 55 5e-07 UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacte... 55 6e-07 UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase ... 55 9e-07 UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase ... 54 1e-06 UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate red... 54 1e-06 UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase ... 54 2e-06 UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase ... 54 2e-06 UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=... 53 3e-06 UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Met... 52 4e-06 UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase ... 52 6e-06 UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Ba... 52 7e-06 UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=ce... 52 7e-06 UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase ... 52 8e-06 UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaeroc... 51 1e-05 UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase ... 51 1e-05 UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate red... 50 2e-05 UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase ... 50 3e-05 UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaeroc... 49 4e-05 UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase ... 49 5e-05 UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alp... 49 5e-05 UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase ... 49 5e-05 UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=ce... 49 5e-05 UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=My... 48 9e-05 UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase ... 48 1e-04 UniRef50_UPI0001BCE5C3 transcriptional repressor NrdR n=3 Tax=Ca... 47 1e-04 UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extruc... 47 2e-04 UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-... 47 2e-04 UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Su... 47 3e-04 UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alp... 46 4e-04 UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B... 46 4e-04 UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase ... 45 5e-04 UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate red... 45 6e-04 UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegol... 45 6e-04 UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III ... 45 6e-04 UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fu... 45 7e-04 UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase ... 45 7e-04 UniRef50_A2RN49 High confidence in function and specificity n=4 ... 45 8e-04 UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha ... 45 8e-04 UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase ... 45 8e-04 UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III ... 45 0.001 UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Ba... 44 0.001 UniRef50_B2UYR3 Putative uncharacterized protein n=3 Tax=Clostri... 44 0.001 UniRef50_A3CW86 Putative uncharacterized protein n=1 Tax=Methano... 44 0.001 UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase ... 44 0.001 UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate red... 44 0.001 UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostr... 44 0.001 UniRef50_A4CGY5 Putative uncharacterized protein n=3 Tax=Bactero... 44 0.001 UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase ... 44 0.001 UniRef50_UPI00016B22AF hypothetical protein cdivTM7_00107 n=1 Ta... 44 0.002 UniRef50_O26580 Putative uncharacterized protein n=1 Tax=Methano... 44 0.002 UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaeroc... 44 0.002 UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Ch... 43 0.002 UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.003 UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase,... 43 0.003 UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase ... 43 0.004 UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=The... 42 0.004 UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aqu... 42 0.006 UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 T... 42 0.006 UniRef50_A5I3C8 Putative uncharacterized protein n=10 Tax=Clostr... 42 0.006 UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha cha... 42 0.006 UniRef50_D1SJR2 Putative uncharacterized protein n=1 Tax=Methano... 42 0.006 UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase ... 42 0.007 UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase ... 42 0.007 UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase ... 42 0.008 UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hyd... 42 0.008 UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triph... 41 0.009 UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hyd... 41 0.011 UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alp... 41 0.011 UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cya... 41 0.014 UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subu... 40 0.016 UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bac... 40 0.017 UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fu... 40 0.023 UniRef50_C8PIL4 Putative uncharacterized protein n=1 Tax=Campylo... 40 0.027 UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Bru... 40 0.027 UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=ce... 40 0.032 UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Bra... 40 0.033 UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myo... 39 0.035 UniRef50_A3CY54 Restriction endonuclease n=1 Tax=Methanoculleus ... 39 0.035 UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepI... 39 0.037 UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=ce... 39 0.055 UniRef50_A8ZMX8 Putative uncharacterized protein n=5 Tax=Acaryoc... 39 0.064 UniRef50_Q8TGY9 2-phosphoglycerate kinase n=1 Tax=Methanopyrus k... 39 0.065 UniRef50_O28725 Uncharacterized protein AF_1547 n=1 Tax=Archaeog... 38 0.091 UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase ... 38 0.093 >UniRef50_B1XJ17 Transcriptional repressor nrdR n=8 Tax=Bacteria RepID=NRDR_SYNP2 Length = 181 Score = 219 bits (558), Expect = 3e-56, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 95/149 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C D++V++SR G G S+RRRR+CL C RFTT+E E V V+K N E Sbjct: 1 MQCPYCQHTDSRVLESRSTGAGRSIRRRRECLSCKHRFTTYERIEFVPISVIKRNGQSEA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ GM+RA EK V +E I++QL+ +R + + IG+LV+ +L++ Sbjct: 61 FDRSKILRGMVRACEKTTVLPSTLEAIAEEIEAQLQQKPKRSITTAQIGDLVLHRLRQES 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYR F+ + +F E ++ L+D Sbjct: 121 EVAYVRFASVYRQFQGVDDFIETLSHLQD 149 >UniRef50_B1WNA0 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_CYAA5 Length = 187 Score = 216 bits (551), Expect = 2e-55, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 98/149 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V++SR G S+RRRR+CL C RFTT+E E V V+K + +E Sbjct: 1 MQCPYCQHTNSRVLESRSSEGGQSIRRRRECLNCKHRFTTYERIEFVPITVIKHDGKKES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL GM+RA EK +S +E ++ I++ L+ +REV + IG LV++ L++ + Sbjct: 61 FDASKLLRGMVRACEKTGISHQRLETIVDDIEAYLQQRPQREVTTHEIGQLVLKYLREEN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVY F+ IK+F E + +L++ Sbjct: 121 EVAYIRFASVYGRFKGIKDFVETLDQLQE 149 >UniRef50_A5G3K3 Transcriptional repressor nrdR n=5 Tax=Bacteria RepID=NRDR_GEOUR Length = 150 Score = 216 bits (550), Expect = 2e-55, Method: Composition-based stats. Identities = 73/148 (49%), Positives = 105/148 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D+KV+DSR GS++RRRR+C C +RFTT E E ++P V+K + REP Sbjct: 1 MKCPFCAFADSKVVDSRPDKGGSTIRRRRECESCGKRFTTHERVEEILPLVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ +A EKRPVS + +E ++ ++ Q++ +GE+E+PSK +G VM +L +D Sbjct: 61 FDRMKLVAGIQKACEKRPVSVETIERLVDRLEIQMQESGEKEIPSKSLGEWVMAELHSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYRSF+DI EF E+ L Sbjct: 121 QVAYVRFASVYRSFKDITEFMSELQDLL 148 >UniRef50_C6P8I1 ATP-cone domain protein n=6 Tax=Bacteria RepID=C6P8I1_CLOTS Length = 155 Score = 216 bits (550), Expect = 2e-55, Method: Composition-based stats. Identities = 68/149 (45%), Positives = 102/149 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +D+KVIDSR + +S+RRRR+C+ C +RFTT+E E V V+K + RE Sbjct: 1 MKCPFCGYLDSKVIDSRPTDDSTSIRRRRECIKCGKRFTTYEKVEQVPILVIKKDLSREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +K+ GM++A EKRPV +E + I+ + + E+E+ S IG +VME+LK +D Sbjct: 61 YDRDKILKGMIKACEKRPVPIKKLEDLADEIERDIYNSYEKEITSAQIGEMVMEKLKNVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYR F+DI F +E+ +L + Sbjct: 121 EVAYVRFASVYRQFKDINTFMDELKKLLN 149 >UniRef50_A7HM70 Transcriptional repressor nrdR n=20 Tax=Bacteria RepID=NRDR_FERNB Length = 153 Score = 215 bits (549), Expect = 3e-55, Method: Composition-based stats. Identities = 74/149 (49%), Positives = 109/149 (73%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+DSR + EG ++RRRR+C C+ RFTT+E E V+K + RE Sbjct: 1 MRCPFCGYEDTRVLDSRELSEGRAIRRRRECPQCHARFTTYERYETGPITVIKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G+L+A EKRP++ DD+E +++I SQL+ +G EVPS++IG LVME+L+K+D Sbjct: 61 FDRKKILNGLLKAFEKRPITVDDMERIVDNIVSQLQKSGTLEVPSELIGKLVMEELRKVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F +I +F E I L + Sbjct: 121 QVAYVRFASVYKDFREIDQFIEVIKELRN 149 >UniRef50_B8HVN1 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_CYAP4 Length = 184 Score = 215 bits (549), Expect = 3e-55, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 97/148 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D++V++SR G SVRRRR+CL CN RFTT+E E V V+K + REP Sbjct: 1 MQCPLCQHTDSRVLESRSAEGGRSVRRRRECLKCNRRFTTYERIEYVPITVIKRDGQREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G++ A K +++ VE ++ I+++L+ REV S IG V++ LK+L Sbjct: 61 FDRSKLLRGIVTAFGKNGIANIRVEALVDEIEAELQQRALREVTSAEIGEAVLQNLKELS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ I++F +E+ L+ Sbjct: 121 EVAYVRFASVYRQFQSIRDFVDELNTLK 148 >UniRef50_B8DSV1 Transcriptional repressor nrdR n=108 Tax=Actinobacteria (class) RepID=NRDR_BIFA0 Length = 200 Score = 211 bits (539), Expect = 4e-54, Method: Composition-based stats. Identities = 65/149 (43%), Positives = 94/149 (63%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVID+R+ +G S+RRRR+C C RF+T E M V K + E Sbjct: 1 MHCPFCQNPDTKVIDTRISDDGHSIRRRRECPNCGARFST---LETTMLLVKKRSGNVEQ 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ +A + RP+ DD++ ++ LRA G +VPS +G ++ LK LD Sbjct: 58 FDRNKVIAGVRKACQGRPIHEDDLKRLGQQVEEDLRARGVAQVPSDEVGKAILRPLKDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY++FED+++F I L D Sbjct: 118 EVAYLRFASVYQNFEDLEDFQHAIDALRD 146 >UniRef50_Q1D346 Transcriptional repressor nrdR n=215 Tax=Bacteria RepID=NRDR_MYXXD Length = 168 Score = 211 bits (539), Expect = 5e-54, Method: Composition-based stats. Identities = 78/149 (52%), Positives = 106/149 (71%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + KVIDSR EGS +RRRR+CL C RFTT+E E + P +VK + RE Sbjct: 1 MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ +G+ +A EKRPVS+D +E + I+ QL+ GE+EVPS +IG +M +L++LD Sbjct: 61 FDREKIVNGLKKACEKRPVSADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVYRSF DI EF +E+ L + Sbjct: 121 EVAYVRFASVYRSFRDIAEFMDELKALRE 149 >UniRef50_B8ILE2 Transcriptional repressor nrdR n=96 Tax=Proteobacteria RepID=NRDR_METNO Length = 193 Score = 211 bits (538), Expect = 6e-54, Method: Composition-based stats. Identities = 72/147 (48%), Positives = 97/147 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +DT+V DSR + S++RRRR C C RFTTFE +L VVK + + P Sbjct: 1 MRCPYCGGLDTQVKDSRPSEDASAIRRRRICPDCGGRFTTFERVQLRELTVVKRSGRKVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL+ + AL KR V SD +E ++ I QL ++GE EV S+ IG LVME LK LD Sbjct: 61 FDRDKLQRSIDVALRKRSVESDRIERLVSGITRQLESSGEPEVTSEAIGELVMEGLKGLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F + K+F E + RL Sbjct: 121 DVAYVRFASVYKNFREAKDFEELLGRL 147 >UniRef50_Q086C8 Transcriptional repressor nrdR n=50 Tax=Gammaproteobacteria RepID=NRDR_SHEFN Length = 149 Score = 210 bits (536), Expect = 1e-53, Method: Composition-based stats. Identities = 108/148 (72%), Positives = 126/148 (85%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC A DTKVIDSRLV +G VRRRR+C C+ERFTTFE AELVMPRV+K + R+P Sbjct: 1 MHCPFCSATDTKVIDSRLVADGHQVRRRRECTECHERFTTFEGAELVMPRVIKRDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR GMLRA+EKRPVS D++E A+ IKS LRATGEREV S+MIGNL+MEQL LD Sbjct: 61 FDEEKLRGGMLRAVEKRPVSIDEIEQALTKIKSTLRATGEREVNSEMIGNLMMEQLMSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYR+FED+ +FGE IA+L+ Sbjct: 121 KVAYIRFASVYRAFEDVSQFGEAIAKLQ 148 >UniRef50_A1TYW9 Transcriptional repressor nrdR n=65 Tax=Proteobacteria RepID=NRDR_MARAV Length = 172 Score = 209 bits (532), Expect = 3e-53, Method: Composition-based stats. Identities = 101/147 (68%), Positives = 122/147 (82%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC DTKVIDSRLV EG VRRRR+CL C ERFTTFE AELVMPRVVK + R+P Sbjct: 1 MHCPFCGEADTKVIDSRLVAEGDQVRRRRECLSCRERFTTFETAELVMPRVVKQDGTRQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+EEKLR+G+++ALEKRPVS ++++ A+N IK +LR+TGEREV S +G VM +L++LD Sbjct: 61 FDEEKLRAGIMKALEKRPVSIEEIDAALNRIKYRLRSTGEREVKSMQLGEEVMTELRQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVYRSF+DI EF EEI RL Sbjct: 121 KVAYVRFASVYRSFQDINEFKEEIERL 147 >UniRef50_C8PM01 Transcriptional regulator NrdR n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PM01_9SPIO Length = 157 Score = 209 bits (532), Expect = 3e-53, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 101/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +VD KV++SR +G+G +RRRR+CL C RFT++E E V+K N REP Sbjct: 1 MRCPYCGSVDDKVVESRTLGQGDCIRRRRECLSCGYRFTSYERIEEKPLMVIKRNGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ KL G+ R+LEKRP+S +++E ++ I+ + + G +E+ S +G +V+ +L Sbjct: 61 FDRSKLERGIERSLEKRPISMNEIENIVSDIEDAAVMNSKGAKEIKSTELGEMVLARLHS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LDKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 LDKVAYIRFASVYKKFNNLDEFINEVQKI 149 >UniRef50_Q6MNX8 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_BDEBA Length = 194 Score = 208 bits (531), Expect = 4e-53, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 99/148 (66%), Gaps = 1/148 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D +V+D+R+ +G S+RRRR+CL C RF+T E L P ++K + REP Sbjct: 1 MKCPFCGHADDRVLDTRVQKDG-SIRRRRECLECKARFSTVETIMLAFPFIIKKDGRREP 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+ G+ + +KRPVS ++ + I + + GE E+ S++IG VM +LK+LD Sbjct: 60 FSKEKILKGLQASCQKRPVSLAQIDAVVEKISAWVINRGESEISSRLIGKKVMAELKQLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIRFASVYR+F+D++EF E + E Sbjct: 120 DVAYIRFASVYRTFKDVQEFVETLEDAE 147 >UniRef50_Q0AFT7 Transcriptional repressor nrdR n=29 Tax=Proteobacteria RepID=NRDR_NITEC Length = 160 Score = 208 bits (531), Expect = 4e-53, Method: Composition-based stats. Identities = 78/148 (52%), Positives = 99/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT V+DSR+ EGS +RRRRQC C +RFTT+E E+ P+++K R Sbjct: 1 MRCPFCGAEDTSVVDSRVSEEGSRIRRRRQCTACGKRFTTYETVEVRFPQIIKQGGNRVE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EKL + RAL KRPV V+ AI I +L G +E+ S+ IG VM++L KLD Sbjct: 61 FNREKLYTSFARALHKRPVPVGQVDAAIERILQKLLGGGAQEISSRTIGEWVMQELYKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYRSFED+ +F E I ++ Sbjct: 121 KVAYIRFASVYRSFEDVGDFQEVIREVQ 148 >UniRef50_B0P1H2 Putative uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1H2_9CLOT Length = 149 Score = 208 bits (529), Expect = 6e-53, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 102/148 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + +++V+DSR + +++RRRRQC C +RFTT+E E V+K + R+ Sbjct: 1 MRCPYCGSENSRVVDSRPAEDNNAIRRRRQCDECGKRFTTYEKIETDPLSVIKKDKTRQL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ K+R+G++++ K PVS +E AI+ I++++ G REV + +IG +VM++LK L+ Sbjct: 61 YDRNKIRNGIVQSCHKLPVSMGQIEAAIDEIETKIYNMGTREVETSVIGEMVMDKLKDLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFA++YR F+D+ F E+ +L Sbjct: 121 EVAYVRFAAIYREFKDVNTFMSELKKLL 148 >UniRef50_C9R8L5 ATP-cone domain protein n=12 Tax=Bacteria RepID=C9R8L5_AMMDK Length = 163 Score = 207 bits (528), Expect = 9e-53, Method: Composition-based stats. Identities = 75/147 (51%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V+D+R EG+++RRRR+C C RFTTFE E + V+K + RE Sbjct: 1 MRCPFCHFADTRVVDTRSANEGTAIRRRRECPRCGRRFTTFERVEELPLVVIKKDGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G LRA KRPV +D+E ++ ++ +LR E E+PS +IG LVME+LK+LD Sbjct: 61 FDRAKILGGCLRACHKRPVRREDLENLVDEVERELRNRLEPEIPSYVIGELVMEKLKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F D +F EEI RL Sbjct: 121 EVAYVRFASVYREFRDSYDFKEEIERL 147 >UniRef50_Q03RK0 Transcriptional repressor nrdR n=49 Tax=Firmicutes RepID=NRDR_LACBA Length = 166 Score = 206 bits (526), Expect = 1e-52, Method: Composition-based stats. Identities = 64/147 (43%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C ++V+DSR +G +RRRR+C C RFTTFE E+ V+K N RE Sbjct: 1 MQCPHCHHNGSRVVDSRPTDDGRVIRRRRECESCGFRFTTFERVEVTPLLVIKKNGTREE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN EK+ G++R+ EKRPV D + ++ +++++RA G E+ S++IG VM +L +D Sbjct: 61 FNREKVLRGIIRSAEKRPVGMDVMTQIVDEVENKIRALGVSEISSQLIGEYVMNRLVDVD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 ++AYIRFASVYR F+D F E+ + Sbjct: 121 EIAYIRFASVYRQFKDTGVFFNELKDM 147 >UniRef50_Q2JVG1 Transcriptional repressor nrdR n=7 Tax=Bacteria RepID=NRDR_SYNJA Length = 200 Score = 206 bits (526), Expect = 2e-52, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 96/148 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + +V++SR G SVRRRR+C+ C RFTT+E E + V+K + RE Sbjct: 1 MKCPRCGKQEIRVLESRSAEGGQSVRRRRECMSCGYRFTTYERIEFMPIMVIKRDGSRES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN K+ G++RA +K VS +E +N I+ +L+ +EV + IG +V+E+L++L Sbjct: 61 FNRNKILQGVMRACQKTQVSVKQMEELVNEIEEKLQLEDVQEVTTLRIGEMVLERLQRLS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+ IK+F E+ +LE Sbjct: 121 EVAYVRFASVYRKFQGIKDFVTELEQLE 148 >UniRef50_Q73N26 Transcriptional repressor nrdR n=2 Tax=Bacteria RepID=NRDR_TREDE Length = 151 Score = 206 bits (524), Expect = 3e-52, Method: Composition-based stats. Identities = 64/150 (42%), Positives = 96/150 (64%), Gaps = 2/150 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C D KV++SR + +G +RRRR+CL C RFT++E E V+K + REP Sbjct: 1 MRCPHCGNCDDKVMESRTLAQGDCIRRRRECLACGYRFTSYEHIEEKPFMVIKKDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQ--LRATGEREVPSKMIGNLVMEQLKK 118 F+ +KL G+ RALEKRPVS + +E + I+ Q L + +E+ + ++G +V+ L Sbjct: 61 FDRKKLEKGIERALEKRPVSLNSIENIVTEIEDQAVLNSGLNKEIETTVLGEMVLSHLYS 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 +DKVAYIRFASVY+ F ++ EF E+ ++ Sbjct: 121 IDKVAYIRFASVYKQFSNLDEFVNEVKKVR 150 >UniRef50_B8GRT8 Transcriptional repressor nrdR n=144 Tax=Proteobacteria RepID=NRDR_THISH Length = 172 Score = 204 bits (521), Expect = 5e-52, Method: Composition-based stats. Identities = 98/148 (66%), Positives = 114/148 (77%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC A DT+VIDSRL GEG VRRRR+CL C+ERFTT+E AEL MPRVVK + REP Sbjct: 1 MRCPFCGAPDTRVIDSRLAGEGDQVRRRRECLSCSERFTTYENAELNMPRVVKRDGSREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNE+KL+SGM ALEKR VS+D VE A+ IK +L GEREV S+ IG VME+L+ LD Sbjct: 61 FNEDKLKSGMTHALEKRAVSTDKVEEAVARIKRKLLGQGEREVDSRRIGEWVMEELRNLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVY SF D++ F E I RLE Sbjct: 121 QVAYIRFASVYLSFADVQAFREVIERLE 148 >UniRef50_D1BM27 ATP-cone domain protein n=3 Tax=Veillonella RepID=D1BM27_VEIPT Length = 163 Score = 204 bits (519), Expect = 9e-52, Method: Composition-based stats. Identities = 69/143 (48%), Positives = 96/143 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKV DSR EG+S+RRRR+C+ C RFTT+E+ E V V+K N RE Sbjct: 1 MRCPYCQHTDTKVTDSRTTDEGNSIRRRRECINCGRRFTTYEIIEEVPLMVLKKNGRREL 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+LR+ +KR V +E +N ++ +R +EV + IG LV++QLK +D Sbjct: 61 FDRGKLLNGLLRSCDKRTVPMSVMEQVVNDVERDIRNEINQEVTTDRIGELVLQQLKDID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEE 143 +VAY+RFASVYR F++I F EE Sbjct: 121 QVAYVRFASVYRKFDNIDSFMEE 143 >UniRef50_C5CHN3 Transcriptional repressor nrdR n=16 Tax=Bacteria RepID=NRDR_KOSOT Length = 158 Score = 204 bits (519), Expect = 9e-52, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 101/149 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +T+VID+RL +G VRRRR+C C RFTT+E E VVK RE Sbjct: 1 MKCPFCNSEETRVIDTRLTDDGHVVRRRRECEHCGGRFTTYERFEQKPIFVVKKGGQRER 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+L+A EKRPVS +++E + I+ ++ +G+ E+ SK IG +VME+LK+ D Sbjct: 61 FDRNKVLNGILKACEKRPVSIEEIENMSSEIEQEVLRSGKAEISSKEIGEMVMEKLKRKD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RFASVY+ F D+ F + I L+D Sbjct: 121 RVAYVRFASVYKEFRDLDHFMDIIRELKD 149 >UniRef50_A0Q128 Transcriptional repressor nrdR n=21 Tax=Clostridiales RepID=NRDR_CLONN Length = 158 Score = 203 bits (518), Expect = 1e-51, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 100/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C ++KV+DSR + ++RRRR+CL CN R+TT+E E + V+K + RE Sbjct: 1 MKCPYCGFEESKVVDSRSTEDHKAIRRRRECLKCNRRYTTYEKIEDIPVLVIKRDSNREY 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ +G+++A +KRP+S ++ + I+ ++ EV S+ IG L+ME+LK++D Sbjct: 61 FDKTKIINGLVKACQKRPISRVQIDSIADEIEKKMNNDMLTEVKSEYIGELIMEKLKEID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +V+Y+RFASVYR F+DI F EEI L Sbjct: 121 EVSYVRFASVYRQFKDINTFIEEITNL 147 >UniRef50_A7HX83 Transcriptional repressor nrdR n=85 Tax=Bacteria RepID=NRDR_PARL1 Length = 162 Score = 203 bits (518), Expect = 1e-51, Method: Composition-based stats. Identities = 68/147 (46%), Positives = 94/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DT+V DSR + +++RRRR C C RFTTFE +L ++K+N R P Sbjct: 1 MRCPYCGNEDTQVKDSRPTEDNTAIRRRRFCTACGGRFTTFERVQLRELTIIKTNGRRVP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KL + A+ KRPV + +E ++ I +L + GE E+PS MIG LVME L LD Sbjct: 61 FDRDKLMRSVQIAMRKRPVEQERIERMVSGIVRRLESMGESEIPSAMIGKLVMEGLSSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR+F + K+F E + L Sbjct: 121 AVAYVRFASVYRNFREAKDFEEFLGEL 147 >UniRef50_C8WXT7 ATP-cone domain protein n=10 Tax=Bacteria RepID=C8WXT7_ALIAD Length = 176 Score = 203 bits (518), Expect = 1e-51, Method: Composition-based stats. Identities = 68/149 (45%), Positives = 100/149 (67%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQC--LVCNERFTTFEVAELVMPRVVKSNDVR 58 M CP+C A +T+VI+SR +G+++RRRR+C C RFTT+E E VVK + R Sbjct: 1 MKCPYCGADNTRVIESRPGEDGTTIRRRRECIHEACGRRFTTYERVEQRPLMVVKKDQKR 60 Query: 59 EPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 E F+ +KL G+++A EKRP+ ++ +E + I+ +LR EREVPS +IG VM+ L++ Sbjct: 61 EEFSRDKLYRGIMKACEKRPIPAETLEAVCDEIERKLRLEYEREVPSSVIGERVMDALRE 120 Query: 119 LDKVAYIRFASVYRSFEDIKEFGEEIARL 147 LD VAY+RFASVYR F D++ +E+ L Sbjct: 121 LDGVAYVRFASVYREFRDVETLLKEVLAL 149 >UniRef50_Q3ZZA1 Transcriptional repressor nrdR n=6 Tax=Bacteria RepID=NRDR_DEHSC Length = 175 Score = 202 bits (515), Expect = 3e-51, Method: Composition-based stats. Identities = 72/149 (48%), Positives = 103/149 (69%), Gaps = 2/149 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP+C D+KVIDSR V +G VRRRR+C+VC +RFTT+E + VVK + RE Sbjct: 1 MNCPYCSHPDSKVIDSRDVDDG--VRRRRECVVCGQRFTTYERFQPAGLFVVKKDQRREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN+EKL SG+ RA EKRP+ + V+ I+++L G+ E+PS ++G++VME+LK LD Sbjct: 59 FNKEKLLSGLRRACEKRPLPAGAVDKVAGDIEAELYNMGKAEIPSTLLGDMVMERLKMLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVYR F DI + + + L + Sbjct: 119 NIAYVRFASVYREFTDITQLKKVVDNLVN 147 >UniRef50_B8G2S3 Transcriptional repressor nrdR n=2 Tax=Chloroflexi RepID=NRDR_CHLAD Length = 174 Score = 201 bits (512), Expect = 6e-51, Method: Composition-based stats. Identities = 69/149 (46%), Positives = 99/149 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPICHFPETDVIDTRKLYEGEVIRRRRKCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+D +E +N +++ + AT ++E+ S+ IG+ VM +L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVYRSF DI + E + L + Sbjct: 121 EVAYIRFASVYRSFADIGKLREAVDELLE 149 >UniRef50_A7BD38 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BD38_9ACTO Length = 195 Score = 201 bits (512), Expect = 6e-51, Method: Composition-based stats. Identities = 61/149 (40%), Positives = 95/149 (63%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++V+D+R+ +G+S+RRRR+C C +RFTT E +VVK + V E Sbjct: 1 MHCPFCHNPDSRVVDTRIADDGASIRRRRECTHCKKRFTT---LETSSFQVVKRSGVVES 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+ +A + RPVS D + + ++ QLR+TG V + +G ++ L+ LD Sbjct: 58 FSRNKVVSGVKKACQGRPVSDDQLAILAQQVEEQLRSTGVSNVSTNEVGKAILPFLRDLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVYR F+ + +F + I L + Sbjct: 118 VIAYLRFASVYRQFDTLDDFEQAIQALRE 146 >UniRef50_Q1JDF4 Transcriptional repressor nrdR n=213 Tax=Bacteria RepID=NRDR_STRPB Length = 164 Score = 201 bits (511), Expect = 7e-51, Method: Composition-based stats. Identities = 66/149 (44%), Positives = 104/149 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + V+DSR +G+++RRRR+C C+ RFTTFE E + V+K + RE Sbjct: 1 MRCPKCNYHKSSVVDSRQAEDGNTIRRRRECEQCHTRFTTFERVEELPLLVIKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++++ +KRPVSS D+E I+ I+ ++R T E EV S IGNLVM++L +LD Sbjct: 61 FSRDKILNGVVQSAQKRPVSSTDIENVISRIEQEVRTTYENEVSSTAIGNLVMDELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 ++ Y+RFASVY+SF+D+ E E + ++ + Sbjct: 121 EITYVRFASVYKSFKDVDEIEELLQQITN 149 >UniRef50_A6LMS2 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_THEM4 Length = 151 Score = 201 bits (511), Expect = 7e-51, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 99/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +T+V+DSR+ G +VRRRR+C+ C RFTT+E E VVK + RE Sbjct: 1 MRCPYCGYEETRVLDSRVDSSGMTVRRRRECVKCKGRFTTYERYEFGPVFVVKKDGKREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+++A EK V+ +++E ++ + + ++ +G E+ + IG LVME+LKKL+ Sbjct: 61 FDRAKILNGVMKACEKTNVTLEEIEKLVDDVVNDVQKSGNLEILTLEIGKLVMEKLKKLN 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAY+RFASVY+ F +I +F E + L+ Sbjct: 121 GVAYVRFASVYKDFREIDQFLEVVEELK 148 >UniRef50_B3DVB4 Transcriptional repressor nrdR n=4 Tax=Bacteria RepID=NRDR_METI4 Length = 166 Score = 201 bits (511), Expect = 8e-51, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 91/148 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR + EG S+RRRR+CL C RFTT+E + + V K N E Sbjct: 1 MKCIKCGNMEDKVIDSRPIKEGKSIRRRRECLRCGYRFTTYEEVQEIELFVKKRNGSIEQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ +ALEKRP++ +E ++ I + A +PS +IG VM +LK +D Sbjct: 61 FDRNKLMIGIQKALEKRPITQSQIEDFVDQIIEECSAEKSPIIPSFVIGTKVMNKLKTID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VA+IRFASVY F D K+F I+ L+ Sbjct: 121 EVAFIRFASVYCKFHDAKDFMNVISELK 148 >UniRef50_Q0AYE0 Transcriptional repressor nrdR n=3 Tax=Bacteria RepID=NRDR_SYNWW Length = 150 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +++V+DSR +GS +RRRR+C C RFTT+E E V+K RE Sbjct: 1 MRCPYCQEFESRVVDSRSGDDGSFIRRRRECNACKRRFTTYERLEERGLLVIKKGGNREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ RA EKRPVS +++E + I+ +LR E EV SK IG +VM++L++ D Sbjct: 61 FDRKKILDGIARACEKRPVSMEEMENMVASIERELRDLYEHEVSSKAIGEMVMDRLQRRD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F D+ F + I +L+ Sbjct: 121 EVAYVRFASVYRQFTDLNSFIKTIDQLK 148 >UniRef50_A2SK03 Transcriptional repressor nrdR n=2 Tax=Burkholderiales Genera incertae sedis RepID=NRDR_METPP Length = 147 Score = 200 bits (510), Expect = 1e-50, Method: Composition-based stats. Identities = 78/147 (53%), Positives = 101/147 (68%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V ++R EG +RRRR+C C++RFTT+E AEL MP +VK + R Sbjct: 1 MRCPFCGHEDTQVAETRESDEGDVIRRRRRCPSCDKRFTTYERAELAMPAIVKKDGSRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+R+ M+ AL KRPVS D VE A+ I+ ++ AT EVPS IG +VM +LKKLD Sbjct: 61 FDRSKIRASMMLALRKRPVSIDQVEAALGRIEEKMLATAANEVPSAKIGEMVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVAY+RFASVYRSFE + EF I + Sbjct: 121 KVAYVRFASVYRSFEGVDEFSRLIKDI 147 >UniRef50_B0U4K7 Transcriptional repressor nrdR n=86 Tax=Proteobacteria RepID=NRDR_XYLFM Length = 181 Score = 199 bits (508), Expect = 2e-50, Method: Composition-based stats. Identities = 77/148 (52%), Positives = 108/148 (72%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+C FC DT+VIDSR+ +G+++RRRR+C C ERF+T E EL +P ++K + RE Sbjct: 1 MYCLFCQHTDTRVIDSRVSEDGATIRRRRECEACGERFSTLETIELKLPVIIKKDGGREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+ RAL+KRPV+ + +EMA+ + +LR GEREVPS ++G VM +L+KLD Sbjct: 61 FDGRKLRTSFDRALQKRPVAEERIEMAMRAVIHRLRMAGEREVPSIVVGECVMAELRKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 V Y+RFASVYRSF+D+ +F EEI +LE Sbjct: 121 HVGYVRFASVYRSFQDVADFREEIEKLE 148 >UniRef50_B5JJP7 Transcriptional regulator NrdR n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJP7_9BACT Length = 153 Score = 199 bits (507), Expect = 2e-50, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 90/147 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + KVIDSR +GS++RRRR+CL C+ RF+T E V K + RE Sbjct: 1 MRCPKCGSELDKVIDSRASKDGSTIRRRRECLDCSHRFSTTEQVLRENLYVTKRDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++ K+ + RA +KRPV ++ + + + + L + E PS IG+ V+E LK +D Sbjct: 61 FDKAKIIYSLRRACQKRPVDAEQINILVEDMIDALESEFGMEFPSSAIGDKVLENLKSID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +AYIRFASVY+ F+++ EF +EI + Sbjct: 121 PIAYIRFASVYKDFKNLDEFLDEIGGI 147 >UniRef50_Q1AS42 Transcriptional repressor nrdR n=10 Tax=Bacteria RepID=NRDR_RUBXD Length = 156 Score = 199 bits (506), Expect = 3e-50, Method: Composition-based stats. Identities = 67/147 (45%), Positives = 103/147 (70%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C DTKVIDSRL ++RRRR+CL C +RFTT+E E + V+K + REP Sbjct: 1 MQCPYCDHEDTKVIDSRLSEAKDAIRRRRECLACGKRFTTYERREPLRLMVLKRDGRREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ +A K+ V+ + +++ ++ I+++LR EV S+ IG++V+ +L++LD Sbjct: 61 FDREKLRAGLEKACAKQRVTGEQIDLIVDQIEAELRERRRHEVTSRRIGDMVLARLRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVYR + D+ +F E+ RL Sbjct: 121 MVAYLRFASVYRQYTDVDQFRSELLRL 147 >UniRef50_Q1IWQ7 Transcriptional repressor nrdR n=3 Tax=Deinococci RepID=NRDR_DEIGD Length = 150 Score = 198 bits (505), Expect = 4e-50, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 96/148 (64%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A D++V++SR +G+S+RRRR+CL CN RFTT+E A+L V+K RE Sbjct: 1 MKCPYCSAPDSRVVNSRPSDDGASIRRRRECLRCNRRFTTYERAQLEPLMVLKRGGQREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +KL G++ A EKRPV + + + +++A+ E+ S+ IG M L+ LD Sbjct: 61 FNPDKLLRGLILATEKRPVDPEQLRAFAYGFEDEVQAS---EITSEEIGRRAMTFLRPLD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIRFASVYR F+ ++ F EEI L+ Sbjct: 118 DVAYIRFASVYRDFDSLERFIEEIQGLK 145 >UniRef50_A1SNC7 Transcriptional repressor nrdR n=10 Tax=Actinomycetales RepID=NRDR_NOCSJ Length = 172 Score = 198 bits (504), Expect = 5e-50, Method: Composition-based stats. Identities = 64/148 (43%), Positives = 94/148 (63%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCP+C DT+V+DSR+ +G S+RRRR C C +RFTT E+ + V+K + EP Sbjct: 1 MHCPYCRNTDTRVLDSRVADDGGSIRRRRTCSACAKRFTTVELMQ---LTVLKRSGASEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F EK +G+ +A + RPV+ D + ++ LR G EVP+ +G ++ L++LD Sbjct: 58 FTREKAVAGVRKACKGRPVTEDQLACLGQAVEDALRLDGAAEVPAHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR+FE +F +EIA L Sbjct: 118 EVAYLRFASVYRAFESADDFEDEIAMLR 145 >UniRef50_C0QQA0 Transcriptional repressor nrdR n=4 Tax=Hydrogenothermaceae RepID=NRDR_PERMH Length = 152 Score = 196 bits (500), Expect = 1e-49, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 93/149 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +++ KV+D+R +G+ +RRRR+CL C RFTT+E E V K N EP Sbjct: 1 MKCPKCGSLNDKVVDTRQSKDGTVIRRRRECLDCGYRFTTYERFEEEKIVVKKKNGTTEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++K+ G+ A + RPVS + + I+ L G+ V S IG+LV E+LKK+D Sbjct: 61 FNKDKIIRGIRLASKNRPVSEKQMVEIADEIEKYLLEEGKLVVESTEIGDLVQEKLKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 V+Y+RF SVY F+DIK+F + + +E+ Sbjct: 121 PVSYLRFKSVYNEFQDIKDFEKALKEIEE 149 >UniRef50_D0L1W9 ATP-cone domain protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1W9_HALNC Length = 175 Score = 196 bits (500), Expect = 1e-49, Method: Composition-based stats. Identities = 82/147 (55%), Positives = 112/147 (76%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C +T VIDSR+V G S+RRRR+CL C +RFTT+E A++ +PR+VKSN R+ Sbjct: 1 MQCIACGHPNTHVIDSRMVEGGVSIRRRRECLACKQRFTTYETADIRLPRIVKSNGARQS 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FNEEKLRSGM+RALEKRPV++ ++ I+ IK L+ATG +EV ++ IG+LVM+ L++LD Sbjct: 61 FNEEKLRSGMMRALEKRPVATSRIDDEIDQIKKSLQATGAKEVTARKIGDLVMQALRRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVY SF++++ F I L Sbjct: 121 QVAYIRFASVYLSFDNVEAFRAAIEGL 147 >UniRef50_Q3YSX9 Transcriptional repressor nrdR n=10 Tax=Anaplasmataceae RepID=NRDR_EHRCJ Length = 153 Score = 196 bits (499), Expect = 2e-49, Method: Composition-based stats. Identities = 71/149 (47%), Positives = 100/149 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC ++T+V DSR + + +RRRR CLVCN RFTT E L V+K N EP Sbjct: 1 MKCPFCNNINTQVKDSRAIEDDILIRRRRICLVCNSRFTTIEKLLLRSFMVIKKNGETEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN++KL S +L A +KRPVS + + + +N+I +L E VP+ +IG +VM+ L KLD Sbjct: 61 FNKQKLLSSILIATKKRPVSHEGINVMVNNIFYELEGKKENAVPTDVIGKMVMDNLFKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 KVAY+RFASVY +F++I +F IA++ + Sbjct: 121 KVAYVRFASVYMNFKNINDFSNIIAKIIN 149 >UniRef50_A5WI35 Transcriptional repressor nrdR n=4 Tax=Gammaproteobacteria RepID=NRDR_PSYWF Length = 153 Score = 196 bits (498), Expect = 2e-49, Method: Composition-based stats. Identities = 82/148 (55%), Positives = 110/148 (74%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C A DTKVIDSRL EG+ VRRRRQC C ERFTTFEV E+VMPR++KSN EP Sbjct: 1 MQCPYCNADDTKVIDSRLAAEGAQVRRRRQCNQCQERFTTFEVVEVVMPRIIKSNGRIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ +KL+ + L+KRPV+ D+ E I+ I+ ++R GERE+ SK +G +VM +LK+LD Sbjct: 61 YDSQKLKRSIQLPLQKRPVTLDEQEAMISRIEKRIRQLGEREISSKGLGEVVMSELKELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAY+RFASVYR F+DI+ F +E+ + Sbjct: 121 DVAYVRFASVYRDFQDIEAFRQELQNIR 148 >UniRef50_C7N9D5 ATP-cone domain protein n=6 Tax=Fusobacteriaceae RepID=C7N9D5_LEPBD Length = 152 Score = 196 bits (498), Expect = 3e-49, Method: Composition-based stats. Identities = 58/149 (38%), Positives = 96/149 (64%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +TKVIDSR EG+S++RRR+C C +RFTT E + V+K N ++P Sbjct: 1 MRCPFCGYENTKVIDSRSYFEGNSIKRRRECENCGKRFTTHEKVAELSLTVIKKNGQKQP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ +G++RA EKR ++ +E I+ I+ ++ E+ S +G+ ++ L LD Sbjct: 61 YSREKVYNGIIRAFEKRHSDTEKIEEMIDKIEREILTEYSGEIKSSELGDKILSYLIDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 ++AY+RFASVY+ F+ + F +EI ++ + Sbjct: 121 EIAYVRFASVYKKFDSLDSFVKEIEKIRN 149 >UniRef50_A0PT74 Transcriptional repressor nrdR n=33 Tax=Bacteria RepID=NRDR_MYCUA Length = 154 Score = 195 bits (497), Expect = 3e-49, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 92/148 (62%), Gaps = 3/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 MHCPFC D++VIDSR EG ++RRRR C C RFTT E + VVK + V EP Sbjct: 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTT---VETAVLAVVKRSGVSEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK+ SG+ RA + R V D + + ++ +RA G E+PS +G ++ L++LD Sbjct: 58 FSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHEVGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYRSF ++F EI L Sbjct: 118 EVAYLRFASVYRSFSSAEDFEREIEALR 145 >UniRef50_D1CDG5 ATP-cone domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDG5_THET1 Length = 158 Score = 195 bits (496), Expect = 4e-49, Method: Composition-based stats. Identities = 65/148 (43%), Positives = 92/148 (62%), Gaps = 4/148 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C + T+V DSR +++RRRR+C C RFTT+E E VMP VVK + RE Sbjct: 1 MRCPKCGSTRTRVTDSRETT--NAIRRRRKCEDCGYRFTTYERIEQVMPLVVKRDGTREE 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ KL +G+ A KRPVS ++ ++ I+ Q +G +EV S IG VM++L+ LD Sbjct: 59 WDRNKLLTGIRLACNKRPVSYSTMQQIVDEIEEQF--SGRQEVDSSEIGQAVMKKLRVLD 116 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVY F D+ F E + ++ Sbjct: 117 EVAYIRFASVYLRFHDVNGFIEAVEQVR 144 >UniRef50_Q04J60 Transcriptional repressor nrdR n=27 Tax=Streptococcus RepID=NRDR_STRP2 Length = 157 Score = 194 bits (494), Expect = 8e-49, Method: Composition-based stats. Identities = 69/147 (46%), Positives = 102/147 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A + VIDSR EG+++RRRR+C C RFTT+E E VVK + RE Sbjct: 1 MRCPKCGATKSSVIDSRQAEEGNTIRRRRECDECQHRFTTYERVEERTLVVVKKDGTREQ 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ +G++R+ +KRPVSSD++ M +N I+ +LR E E+ S+ IG+LVME+L +LD Sbjct: 61 FSRDKIFNGIIRSAQKRPVSSDEINMVVNRIEQKLRGRNENEIQSEDIGSLVMEELAELD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 ++ Y+RFASVYRSF+D+ E + ++ Sbjct: 121 EITYVRFASVYRSFKDVSELESLLQQI 147 >UniRef50_C7NVI2 ATP-cone domain protein n=3 Tax=Halobacteriaceae RepID=C7NVI2_HALUD Length = 160 Score = 192 bits (489), Expect = 2e-48, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 89/149 (59%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C T V+D+ +G+S+RRRR+C C RFTT+E E +V K + EP Sbjct: 1 MDCPDCGNDRTHVLDTEPSADGTSIRRRRECQDCGFRFTTYERLEWESLQVKKRDGAIEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EKLR+G+ RA+EKRPV V ++ I L R V + IG+LV E L++ D Sbjct: 61 FDREKLRAGIERAVEKRPVDEQAVTAIVDAIHDALTEREGRIVTTTQIGDLVSEHLRERD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAY+RF SVY +F D +EF E+ + D Sbjct: 121 QVAYLRFVSVYEAFADPEEFRRELDAVLD 149 >UniRef50_Q3IM07 Transcriptional repressor nrdR n=3 Tax=Halobacteriaceae RepID=NRDR_NATPD Length = 162 Score = 192 bits (489), Expect = 3e-48, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 97/148 (65%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CP C T+VID+ +G+SVRRRR+C C+ RFTT+E E +V K + E Sbjct: 1 MNCPDCGNGRTRVIDTGASSDGASVRRRRECQRCSFRFTTYERPEWKSLQVKKRDGTIES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+++KLR+G+ RA+EKR V+ V ++ I+S+L+ R V S +IG LV E L+ LD Sbjct: 61 FDQQKLRTGIERAVEKRGVAETTVTALVDDIESELQDREARIVSSSLIGELVSENLRTLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRF SVY++F + +EF +E+ + Sbjct: 121 KVAYIRFVSVYKAFSEPQEFLKELDAVL 148 >UniRef50_UPI0001C37AA6 transcriptional regulator NrdR n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C37AA6 Length = 155 Score = 191 bits (487), Expect = 5e-48, Method: Composition-based stats. Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M+CPFC D KVIDSR + +RRRR+C+ C+ RFTT+EV E+ + V K + +P Sbjct: 1 MNCPFCGFNDFKVIDSRPSDDR--IRRRRECIKCHGRFTTYEVVEMPLLMVEKRDGSFQP 58 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL +G+ A++KRPV+ D V +++++ + SK IG LV+ +L+ LD Sbjct: 59 FDRNKLITGIFSAIKKRPVTIDQVSEIADYVENHYANALKTIAKSKEIGELVLNKLRDLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFASVY F D F +I+ +E Sbjct: 119 PIAYIRFASVYEDFTDTASFVAKISEIE 146 >UniRef50_B2UQD6 Transcriptional repressor nrdR n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=NRDR_AKKM8 Length = 163 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 69/148 (46%), Positives = 100/148 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M C C ++ KVIDSR+ +G+++RRRR CL C+ R+TT+E E RVVK +++RE Sbjct: 1 MRCVQCGHLEDKVIDSRMSKDGTTIRRRRVCLRCDYRYTTYEQIERTELRVVKRDNLREA 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 N EK+ G+++A EKRPVS D ++ A+ I S+L REVPS IG V+E+L +D Sbjct: 61 LNREKILRGLVKACEKRPVSMDRLDRAVEEIISELHRDHLREVPSSEIGKKVIEKLYAID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 VAYIR+ SVYR F +++EF +EI ++ Sbjct: 121 PVAYIRYVSVYRQFSNVEEFIQEITQMR 148 >UniRef50_Q6A8Y9 Transcriptional repressor nrdR n=4 Tax=Actinomycetales RepID=NRDR_PROAC Length = 168 Score = 189 bits (481), Expect = 2e-47, Method: Composition-based stats. Identities = 63/149 (42%), Positives = 97/149 (65%), Gaps = 3/149 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC D++V+DSR+ +G+++RRRRQC +C RFTT E ++ V K N + EP Sbjct: 1 MRCPFCQHDDSRVLDSRVCEDGTAIRRRRQCPMCERRFTTIERMQMT---VHKRNGIEEP 57 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +K+ G+ A + RPV+ D+ + ++ LRA G E+PS+ IG ++ L++LD Sbjct: 58 FSRDKVIRGVRNACKGRPVTDADLALLGQRVEDGLRARGVAEIPSEEIGLAILGPLRELD 117 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +AY+RFASVY ++ I++F EI RL D Sbjct: 118 SIAYLRFASVYLNYNTIEDFATEIDRLRD 146 >UniRef50_Q7UG92 Transcriptional repressor nrdR n=1 Tax=Rhodopirellula baltica RepID=NRDR_RHOBA Length = 156 Score = 188 bits (478), Expect = 5e-47, Method: Composition-based stats. Identities = 68/148 (45%), Positives = 98/148 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + + KV DSR G VRR+R C C RFTT E + + RVVKS++ REP Sbjct: 1 MRCPFCHSDNDKVQDSRTAEAGYVVRRKRLCQTCQRRFTTLEQIDALNVRVVKSDETREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK++ G+ RA KR V+SD++E + I+ + A + E+P+ IG +V+ +L LD Sbjct: 61 FDREKIKRGIERACSKRAVTSDEIEKTVQKIEEAIYAEFDMEIPTATIGEVVLRKLATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAYIRFASVYR F+D K+F + ++ L+ Sbjct: 121 EVAYIRFASVYRDFDDAKDFLQIVSNLQ 148 >UniRef50_D1Y5R6 Transcriptional regulator NrdR n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y5R6_9BACT Length = 180 Score = 187 bits (476), Expect = 8e-47, Method: Composition-based stats. Identities = 66/148 (44%), Positives = 98/148 (66%), Gaps = 2/148 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELV-MPRVVKSNDVRE 59 M CP C +++T+V+++R EG ++RRRR+C C RFTT+E E + + K + RE Sbjct: 11 MRCPQCGSMETRVMETRTAEEGRTIRRRRECTACGFRFTTYERVEERKVLWISKKDGRRE 70 Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ KL G+ RA E+ P+S D +E I+++LR +G+ EV S IG LVM++L ++ Sbjct: 71 AFDRSKLVRGISRACERLPISLDTIEDMAARIETRLRESGD-EVSSMAIGELVMKELAEI 129 Query: 120 DKVAYIRFASVYRSFEDIKEFGEEIARL 147 +KVAY+RFASVYR F D+ F EIA+L Sbjct: 130 NKVAYVRFASVYREFTDLSSFQREIAKL 157 >UniRef50_C7GYP4 Transcriptional regulator NrdR n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYP4_9FIRM Length = 156 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 64/149 (42%), Positives = 95/149 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C +T V DSR + + +RRRR+CL CNE+FTT+E E + +V+K++ RE Sbjct: 1 MKCPKCGHTNTSVEDSRSALKDTVIRRRRKCLNCNEKFTTYERVERYIVKVIKNDGRRED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F++EK+R + A +KR +S D +E I I+ + +E+ SK IG LVME LKK+D Sbjct: 61 FSQEKIRKSINIACQKRKISQDTIEGIIKSIERTIENLDNKEIESKAIGGLVMEALKKID 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 VAY+RFASVY F + + F +E ++ + Sbjct: 121 PVAYVRFASVYMDFTEPEGFIKEASKFIE 149 >UniRef50_D1AYC7 ATP-cone domain protein n=2 Tax=Fusobacteriaceae RepID=D1AYC7_STRM9 Length = 154 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 55/147 (37%), Positives = 91/147 (61%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +TKV+DSR +G+S++RRR+C +CN+RF T E + V+K N E Sbjct: 1 MKCPYCGDKETKVVDSRSYSDGNSIKRRRECDLCNKRFNTIEKIFNLPIVVIKKNGEVEE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ G++R+L KR + V+ I+ I+ ++ + ++ S ++G+ ++E+L D Sbjct: 61 FDRNKIYQGIIRSLVKRSYVQNKVDEMIDEIEREILTNYDGKIHSNVLGDTILEKLFLFD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVY FE++ F I + Sbjct: 121 EVAYIRFASVYNKFENLDSFLNTIKEV 147 >UniRef50_Q7U4S9 Transcriptional repressor nrdR n=23 Tax=Cyanobacteria RepID=NRDR_SYNPX Length = 160 Score = 185 bits (471), Expect = 3e-46, Method: Composition-based stats. Identities = 63/147 (42%), Positives = 89/147 (60%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP D++V++SR G SVRRRR+CL C RFTT+E E V V+K N RE Sbjct: 1 MQCPSYQNTDSRVLESRAADGGRSVRRRRECLNCEFRFTTYERVETVPITVIKRNGNREI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KL G+ RA EK + + +E + ++ +L+ REV S IG LV+ +LK++ Sbjct: 61 FSRSKLLHGLNRACEKTGLDASRLETLVEELELKLQQRSGREVSSAEIGELVLVELKQMS 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAYIRFASVYR F+ I +F + + Sbjct: 121 EVAYIRFASVYRQFQGIDDFVSTLETM 147 >UniRef50_Q5P7P0 Transcriptional repressor nrdR n=3 Tax=Rhodocyclaceae RepID=NRDR_AZOSE Length = 171 Score = 184 bits (469), Expect = 5e-46, Method: Composition-based stats. Identities = 76/148 (51%), Positives = 103/148 (69%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC +T+V D+R G VRRRR+C C++RFTT+E +L MP +VK N R Sbjct: 1 MKCPFCGDPNTQVADTRENEGGEVVRRRRRCPKCDKRFTTYERIDLKMPHIVKRNGNRSE 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F +KL M AL KRPV+ + ++ A++ I+++L A GE+EVPS+ +G LVM +LKKLD Sbjct: 61 FEHDKLAGSMKLALRKRPVTLEALDAAVDRIEAKLLALGEQEVPSEKVGELVMRELKKLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 KVAYIRFASVYR+F D+ EF E I ++ Sbjct: 121 KVAYIRFASVYRNFADVDEFAEVIREVK 148 >UniRef50_C1F652 Transcriptional repressor nrdR n=63 Tax=Bacteria RepID=NRDR_ACIC5 Length = 168 Score = 184 bits (467), Expect = 1e-45, Method: Composition-based stats. Identities = 70/148 (47%), Positives = 100/148 (67%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C +V+DSR E S+RRRR+C CN+RFTT+E + + VVK + RE Sbjct: 1 MKCPYCGFAQDRVVDSRESKEADSIRRRRECERCNKRFTTYERIDEIPYMVVKKDGRREK 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ SG+LRA EKRP+S+ +E ++ ++ L + ERE + IG L+ME+LK+LD Sbjct: 61 FDRHKVLSGLLRACEKRPISATKLENLVDETEAYLMDSAERERSTTEIGLLLMEKLKQLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 V+YIRFASVYR F+D+ EF EE+ +L Sbjct: 121 TVSYIRFASVYRDFKDVNEFKEELEQLL 148 >UniRef50_A8SJE3 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SJE3_9FIRM Length = 148 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 58/146 (39%), Positives = 92/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C A T+V+DSR + + V+RRR C +CN +FTT+E + V+K + R+ Sbjct: 1 MKCPNCGAETTRVLDSRNSNDKTYVKRRRVCEICNYKFTTYEKMPEFVIFVLKKDGSRQI 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ K+ +G+ + EKR + ++E I+ I+ +R + E+ S IG LV++ LK LD Sbjct: 61 FSRNKVFAGIKKCCEKRNIQDKEIESVIDSIEMDIRQNYKNEIKSTQIGELVLKYLKSLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 +V+YIRFA+VY+ F+DIK F E + + Sbjct: 121 EVSYIRFAAVYKEFKDIKAFLEYLQK 146 >UniRef50_Q2GE55 Transcriptional repressor nrdR n=2 Tax=Neorickettsia RepID=NRDR_NEOSM Length = 149 Score = 182 bits (462), Expect = 3e-45, Method: Composition-based stats. Identities = 65/147 (44%), Positives = 93/147 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT V DSR V EG+ ++RRR C C +FTTFE +L +V+K N E Sbjct: 1 MKCPFCGNRDTNVRDSRSVNEGTFIKRRRFCGECGAKFTTFETIQLKEIKVIKKNGSCES 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ EK + AL KRPV+ + V+ +N + ++ + ++ +K+IG L+ME+L LD Sbjct: 61 FDREKAMRSVEVALRKRPVTRERVDELMNSVIYKIERIHDAKITAKVIGELIMEELATLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 KVA+IRFASVY +FE+ K+F + I L Sbjct: 121 KVAFIRFASVYMNFENEKDFVQLIGSL 147 >UniRef50_C7LY15 ATP-cone domain protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LY15_ACIFD Length = 160 Score = 181 bits (461), Expect = 5e-45, Method: Composition-based stats. Identities = 60/147 (40%), Positives = 93/147 (63%), Gaps = 2/147 (1%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC + +V+++R+ +G+++RRRR+CL C RFTTFE V K + EP Sbjct: 1 MRCPFCGTNEDRVVETRVADDGAAIRRRRECLGCGRRFTTFERITEARVLVRKRSGQLEP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ +KLR G+ AL+ RP+ + ++E + ++ +RA EV S +G V+E L++LD Sbjct: 61 FDRDKLRRGVQAALKNRPIGALEIERLLAEVEEAVRAVD--EVESAELGLRVLEGLRQLD 118 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 VAY+RFASVY++F D +F +A L Sbjct: 119 PVAYVRFASVYQNFTDADDFRRVLADL 145 >UniRef50_A6DMG1 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DMG1_9BACT Length = 157 Score = 181 bits (459), Expect = 7e-45, Method: Composition-based stats. Identities = 67/148 (45%), Positives = 92/148 (62%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP C KV+++RL + + +RRRRQC CN RF+T E V+KS +E Sbjct: 1 MRCPECSNTSNKVLETRLSKDRNILRRRRQCNSCNTRFSTQEEMVRGDLMVIKSGGRKED 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN +K+R G+ AL KRPV D + A+ +IK + +REV S IG +VM +LK+LD Sbjct: 61 FNIQKVREGLQLALRKRPVGDDAINEAVENIKLSVSDRLDREVFSHEIGEMVMIELKRLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +VAY+RFASVYR F+D EF E I ++ Sbjct: 121 EVAYVRFASVYREFKDASEFIETIQSMQ 148 >UniRef50_Q6MA76 Transcriptional repressor nrdR n=13 Tax=Chlamydiales RepID=NRDR_PARUW Length = 162 Score = 179 bits (455), Expect = 2e-44, Method: Composition-based stats. Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 1/148 (0%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC KV DSR E +++RRRR+CL C +RFTTFE EL +V K + E Sbjct: 1 MRCPFCQFEGLKVTDSRDAMEMNAIRRRRECLNCLKRFTTFETIELT-VQVQKRDGTYED 59 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F + KL +G+ A +S D V + ++L + +++ + +G + M+ L+ LD Sbjct: 60 FQQHKLINGLAAACRHTKISHDQVISLAAQMTNELMQSQIQQISTTQLGEMAMKHLQSLD 119 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148 +AYIRFA VY+ F+D+ E E I ++ Sbjct: 120 PIAYIRFACVYKRFKDLGELEEAIKTIQ 147 >UniRef50_A9WKI1 Transcriptional repressor nrdR n=17 Tax=Bacteria RepID=NRDR_CHLAA Length = 166 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 70/149 (46%), Positives = 99/149 (66%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC V+T VID+R + EG +RRRR+C C RFTT+E E V VVK + REP Sbjct: 1 MRCPFCHFVETDVIDTRKLYEGEVIRRRRRCRACGRRFTTYERIESVSLMVVKKDGTREP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 ++ EK+ G+ A +RPVS+ +E +N +++ + T E E+ S+ IG+ VM++L+ LD Sbjct: 61 YDREKIARGVRTACYRRPVSAAAIEQLVNDVETAIMNTDEHEISSQAIGDAVMQRLRDLD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARLED 149 +VAYIRFASVYR+F DI + E + L D Sbjct: 121 EVAYIRFASVYRAFTDIGKLREAVDELLD 149 >UniRef50_A3VLS6 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=A3VLS6_9RHOB Length = 145 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 56/134 (41%), Positives = 86/134 (64%) Query: 15 DSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRAL 74 DSR + ++RRRR C C RFTT+E +L V+KSN RE F+ EKL + ++ Sbjct: 3 DSRPAEDHVAIRRRRFCPACGGRFTTYERVQLRDLVVIKSNGRREDFDREKLERSIRISM 62 Query: 75 EKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSF 134 +KRPV + ++ I+ I +L + GE ++PSK IG +VME L ++D VAY+RFASVY++F Sbjct: 63 QKRPVEPERIDQMISGIVRRLESMGETDIPSKTIGEIVMESLARIDTVAYVRFASVYKNF 122 Query: 135 EDIKEFGEEIARLE 148 + +F + ++ L Sbjct: 123 QAADDFEKFMSELR 136 >UniRef50_Q9JXZ9 Transcriptional repressor nrdR n=22 Tax=Neisseria RepID=NRDR_NEIMB Length = 154 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 53/146 (36%), Positives = 93/146 (63%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CPFC DT+V DSRL+ E ++VRRRR C C +RF T E AEL MP V+ + R P Sbjct: 1 MKCPFCAHPDTRVADSRLMEERNAVRRRRHCPNCGKRFGTLETAELKMPAVIGPDKKRSP 60 Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 FN ++LR+ + A K ++ + ++ + + +L +G+R++PS + ++V+++L + D Sbjct: 61 FNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRDIPSAALADMVLKELLRQD 120 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIAR 146 A +RFA++++ F++ +F +A+ Sbjct: 121 TEAAVRFAALHKRFDNPADFASWLAQ 146 >UniRef50_C1XFP5 Transcriptional regulator NrdR n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XFP5_MEIRU Length = 161 Score = 171 bits (433), Expect = 7e-42, Method: Composition-based stats. Identities = 55/135 (40%), Positives = 83/135 (61%), Gaps = 3/135 (2%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSR EGS +RRRR+C VC RFTT+E A++ V+K + +E F+ KL G+ Sbjct: 1 MLDSRPSDEGSVIRRRRECPVCKRRFTTYERAQVEPLLVIKRSGRKETFDPNKLLRGLSL 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYR 132 A KRP+ + ++ + ++ E E+ S+ IG + LK+LD VAYIRFASVYR Sbjct: 61 AARKRPIDPEVLQEFAFGFEDTVK---EMEITSEEIGLRSLAFLKELDPVAYIRFASVYR 117 Query: 133 SFEDIKEFGEEIARL 147 F+ ++ F EE+ +L Sbjct: 118 EFDSLENFIEEVRKL 132 >UniRef50_A5ZR79 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZR79_9FIRM Length = 121 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 48/119 (40%), Positives = 76/119 (63%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C +RFTT+E E + V+K + RE ++ K++ G+LRA KRP+ + +E ++ Sbjct: 2 CESCGKRFTTYEKVETIPLSVIKKDQTREQYDRSKIQGGILRACYKRPIPVEKIESLMDS 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 I+ + T ++E+ S IG +VME LK LD VAY+RFASVYR F+D+ F +E+ + + Sbjct: 62 IEGDIFDTADKEISSTRIGEIVMEHLKDLDAVAYVRFASVYREFKDVSTFMDELKKFME 120 >UniRef50_A6G9U3 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G9U3_9DELT Length = 235 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 71/118 (60%) Query: 31 CLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINH 90 C C RFTT E + +P V+K R+PF+ K+R G+ A KR +SS+ ++ + Sbjct: 2 CNECGHRFTTRERIDETLPMVLKRTGERQPFDRNKIRRGLDIACRKRGISSEGLDRIVQQ 61 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 I++ G+RE+ S+ IG +M L LD+VAY+RF SVYRSF+ I EF + + ++ Sbjct: 62 IETWASTKGDREIDSEEIGERIMHHLYALDQVAYVRFVSVYRSFDSIAEFEQLLREMQ 119 >UniRef50_UPI0001698138 transcriptional regulator NrdR n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698138 Length = 122 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 72/116 (62%), Positives = 94/116 (81%) Query: 13 VIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLR 72 ++DSRL G+G +RRRRQC C ERFTT+E AEL MP+VVK + R PF+E+KLR+GM R Sbjct: 1 MVDSRLSGDGDQIRRRRQCSTCKERFTTYETAELNMPQVVKQDGSRVPFDEDKLRAGMER 60 Query: 73 ALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFA 128 ALEKRPVS++ V+ AI+HI +L GERE+PS IG+LVM++LK+LD+VAY+RFA Sbjct: 61 ALEKRPVSAERVDAAISHITRKLTTKGEREIPSLQIGDLVMDELKRLDQVAYVRFA 116 >UniRef50_UPI00016B2574 transcriptional repressor n=2 Tax=candidate division TM7 RepID=UPI00016B2574 Length = 155 Score = 157 bits (398), Expect = 8e-38, Method: Composition-based stats. Identities = 56/137 (40%), Positives = 85/137 (62%) Query: 10 DTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSG 69 D+KV++SR +G+G ++RRRR+ L RFTT+E E V+K N RE F+ EKL Sbjct: 10 DSKVLESRELGDGKTIRRRRETLDGKCRFTTYERIERPDLSVIKKNSKRELFDREKLARA 69 Query: 70 MLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFAS 129 + +++ K S +VE IN + + GE EV S IG++V++ L K +++AY+RFAS Sbjct: 70 ISQSVGKFFTSEIEVEQIINETEEAIYNLGETEVLSSAIGDIVLDILAKKNEIAYVRFAS 129 Query: 130 VYRSFEDIKEFGEEIAR 146 VYR F+ + EF +A Sbjct: 130 VYRDFKTLDEFENILAA 146 >UniRef50_D0WEJ6 Iron oxidase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEJ6_9ACTN Length = 118 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 1/118 (0%) Query: 32 LVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINH 90 + C RFTT+E VVK++ + FN EKL G+ A KRP + +D I+ Sbjct: 1 MKCGNRFTTYERLGDNPLIVVKADGSSQVFNREKLYRGISIACAKRPNIPNDKKTEIIDA 60 Query: 91 IKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 I++ LR +G E+ SK +G++V+E LK LD VAYIRFASVY+ F+ I+EF + + L+ Sbjct: 61 IETALRNSGRAEINSKDLGDMVLEHLKPLDDVAYIRFASVYKDFQSIEEFQDALKGLK 118 >UniRef50_B0PDU3 Putative uncharacterized protein n=3 Tax=Bacteria RepID=B0PDU3_9FIRM Length = 118 Score = 141 bits (356), Expect = 6e-33, Method: Composition-based stats. Identities = 47/106 (44%), Positives = 68/106 (64%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 E V+K + RE F+ KL +G++RA EKRPV +E A+ I+ L + ++EV Sbjct: 2 IETTPLVVIKKDKSREGFDSGKLLAGLVRACEKRPVPLGILEDAVRDIEMMLHNSLDKEV 61 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 PS IG L ME+L+ +D+VAY+RFASVYR F+DI F +E+ L + Sbjct: 62 PSYRIGELAMEKLRAIDEVAYVRFASVYRQFKDIDSFMKELQSLLE 107 >UniRef50_D0LGT6 ATP-cone domain protein n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LGT6_HALO1 Length = 164 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 47/134 (35%), Positives = 75/134 (55%), Gaps = 4/134 (2%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60 M CP+C + D++V+DSR +G VRRRRQC C RFTT+E A +V+K ++ E Sbjct: 1 MQCPYCGS-DSQVLDSRGNADG--VRRRRQCNACRRRFTTYERAGAPSLKVIKRSERVEG 57 Query: 61 FNEEKLRSGMLRALEKR-PVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 F+ +KL+ + R R +S+ D+ I+++L + V S I +L + +L + Sbjct: 58 FDSDKLQRALERVCRGRSAISASDIRRIARDIEAELVDASAKSVHSGQIVDLALRRLADI 117 Query: 120 DKVAYIRFASVYRS 133 D++AY R A Y Sbjct: 118 DRIAYNRLAVNYID 131 >UniRef50_C0DU07 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DU07_EIKCO Length = 106 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 51/101 (50%), Positives = 76/101 (75%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 MP+++K+N R F+ KL++ + RAL KRP+S++ +E ++ I+ L TG +EVPS++ Sbjct: 1 MPQIIKNNGERVMFDPLKLQTSLQRALHKRPISAEAIEHTVHEIEECLYKTGSKEVPSRL 60 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 IG LVME+L KLD+VAY+RFASVY+SF+D+ EF +A LE Sbjct: 61 IGELVMERLAKLDQVAYVRFASVYKSFKDVAEFTRTVAGLE 101 >UniRef50_C2D6G3 NrdR family transcriptional regulator n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D6G3_9ACTN Length = 104 Score = 134 bits (338), Expect = 1e-30, Method: Composition-based stats. Identities = 43/102 (42%), Positives = 69/102 (67%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + +EPF+ EKLR G++ A KR + + + I+ I+++LR G+ E+ S+ Sbjct: 2 PILVIKKDGTKEPFSHEKLRRGLVAATIKRSIDLNRINQLIDSIETELRDNGKTEITSQE 61 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED 149 IG V+++L +DKVAY+RFASVYR F+D++EF EE+ L + Sbjct: 62 IGMRVLQKLIDIDKVAYVRFASVYRDFKDVEEFSEELRSLSN 103 >UniRef50_Q0RDY4 Putative regulatory protein nrdR n=1 Tax=Frankia alni ACN14a RepID=Q0RDY4_FRAAA Length = 224 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 41/105 (39%), Positives = 67/105 (63%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 E RV+K + V EPF+ K+ +G+ +A + RPV DD+ + ++ +R++G EV Sbjct: 1 MEEASLRVLKRSGVAEPFSRAKVITGVRKACQGRPVRDDDLALLAQRVEDAVRSSGSAEV 60 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLE 148 P++ IG ++ L++LD+VAY+RFASVY +FE + +F IA L Sbjct: 61 PAEAIGRAILGPLRELDEVAYLRFASVYLAFESLGDFENAIAALR 105 >UniRef50_A3UCB8 Putative uncharacterized protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UCB8_9RHOB Length = 116 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 41/103 (39%), Positives = 66/103 (64%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREV 103 +L V+KS+ RE F+ +KL +L A +KR + + VE I+ I +L + G+ +V Sbjct: 1 MQLRDLHVIKSDGKREGFDRDKLARSVLLASQKRAIERERVEQMISGIVRRLESRGDPDV 60 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIAR 146 P+ +IG LVM+ L+ LD VAY+R+ASVY+ F+++ +F E I Sbjct: 61 PASVIGELVMDGLRNLDTVAYVRYASVYKDFQEVDDFSEFIKG 103 >UniRef50_C9LL66 Iron oxidase n=1 Tax=Dialister invisus DSM 15470 RepID=C9LL66_9FIRM Length = 104 Score = 120 bits (303), Expect = 9e-27, Method: Composition-based stats. Identities = 43/87 (49%), Positives = 66/87 (75%) Query: 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120 F+ KLR+G++RA EKR +SS +E +N ++ +R ++EVP+++IGNL+ME+L+KLD Sbjct: 2 FDRNKLRNGLVRACEKRNISSRQIEEIVNSVERTVRNELKQEVPTEVIGNLIMEELRKLD 61 Query: 121 KVAYIRFASVYRSFEDIKEFGEEIARL 147 +VAY+RFASVYR F+D+ F E+ L Sbjct: 62 QVAYVRFASVYREFKDLSSFMSELETL 88 >UniRef50_B4D972 ATP-cone domain protein n=2 Tax=Verrucomicrobia RepID=B4D972_9BACT Length = 97 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 42/82 (51%), Positives = 57/82 (69%) Query: 67 RSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIR 126 GM++A EKRPVS + +E + I +L RE+PS +IG VM++L +LD+VAY+R Sbjct: 2 LGGMIKACEKRPVSIEVLEKSAEEIVQELETEFRREIPSNVIGAKVMDKLHQLDEVAYVR 61 Query: 127 FASVYRSFEDIKEFGEEIARLE 148 +ASVYR F+DI EF EEI LE Sbjct: 62 YASVYRHFQDIGEFLEEIQSLE 83 >UniRef50_UPI00019030D6 transcriptional regulator NrdR n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019030D6 Length = 120 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 39/109 (35%), Positives = 63/109 (57%) Query: 39 TTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT 98 TTFE +L + + + F + + AL KRPV D +E A++ I S+L ++ Sbjct: 1 TTFERVQLRRADGHQEDGPQGAFRSRQAGALFEVALRKRPVERDRIERAVSGIVSRLESS 60 Query: 99 GEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARL 147 GE E+ S+ IG V+E +K LD V ++R+ASVYR F ++F + I+ + Sbjct: 61 GETEISSEQIGLQVLEAMKSLDDVGFVRYASVYRDFSLAEDFEKVISEI 109 >UniRef50_Q50818 ORF is homologous to unidentified ORF adjacent to dnaB in Bacillus subtilis (Fragment) n=1 Tax=Mycobacterium tuberculosis RepID=Q50818_MYCTU Length = 143 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 42/70 (60%) Query: 79 VSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK 138 V D + + ++ +RA G E+PS +G ++ L++LD+VAY+RFASVYRSF Sbjct: 1 VDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELDEVAYLRFASVYRSFSSAD 60 Query: 139 EFGEEIARLE 148 +F EI L Sbjct: 61 DFAREIEALR 70 >UniRef50_C4F8P3 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8P3_9ACTN Length = 78 Score = 93.2 bits (231), Expect = 2e-18, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 51/78 (65%) Query: 71 LRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASV 130 +RA KR + ++ I+ I+ +LR + S IG++V+++L+++DKVAYIRFASV Sbjct: 1 MRATSKRDIDLSELNALIDDIERELRGGTLTAIRSHDIGDMVLKRLERIDKVAYIRFASV 60 Query: 131 YRSFEDIKEFGEEIARLE 148 YR F D+ EF E+ +L Sbjct: 61 YRDFRDVDEFISELDKLR 78 >UniRef50_A8UZR2 Putative uncharacterized protein n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UZR2_9AQUI Length = 88 Score = 90.5 bits (224), Expect = 1e-17, Method: Composition-based stats. Identities = 31/78 (39%), Positives = 46/78 (58%) Query: 71 LRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASV 130 + A + RPVS E I+ L G+ V S IG+LV ++LKKLD ++YIRF SV Sbjct: 1 MLAAKNRPVSQKQAEEIAEDIEKYLIDEGKLLVESTEIGDLVQQRLKKLDIISYIRFKSV 60 Query: 131 YRSFEDIKEFGEEIARLE 148 Y F+D+K+F + + + Sbjct: 61 YNEFKDLKDFQKTLEEFQ 78 >UniRef50_B2RKM0 Anaerobic ribonucleoside-triphosphate reductase n=14 Tax=Bacteria RepID=B2RKM0_PORG3 Length = 798 Score = 85.1 bits (210), Expect = 7e-16, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 10/100 (10%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSD--DVEMAINHIKSQLRATGER 101 E V+ R+VK + + F+ EK+R +++A V + ++ + + R +GE Sbjct: 1 MEEVILRIVKRDGHVQSFDPEKIRQAIIKAYRAGGVHEEAARIDNIVQSVTDFARQSGEL 60 Query: 102 EVPSKMIGNLVMEQLKKLDK-VA--YIRFASVYRSFEDIK 138 V + I + V E+L +L+ +A YI +YR + ++ Sbjct: 61 -VTVEQIQDRVEEELMRLNPFIAKKYI----IYREWRTVE 95 >UniRef50_UPI0000393417 COG1327: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains n=1 Tax=Bifidobacterium longum DJO10A RepID=UPI0000393417 Length = 93 Score = 81.7 bits (201), Expect = 6e-15, Method: Composition-based stats. Identities = 26/67 (38%), Positives = 44/67 (65%) Query: 67 RSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIR 126 SG+ +A + RPV +D+++ ++ LR+ G EV S +G +++ L+ LD VAY+R Sbjct: 2 ISGVRKACQGRPVREEDLKLLGQKVEEDLRSRGLAEVTSDEVGKAILKPLRDLDVVAYLR 61 Query: 127 FASVYRS 133 FASVY++ Sbjct: 62 FASVYQN 68 >UniRef50_C2BIL8 Possible ribonucleoside-triphosphate reductase n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BIL8_9FIRM Length = 706 Score = 81.3 bits (200), Expect = 9e-15, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 12/110 (10%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE-KRPVSSD-DVEMAINHIKSQLRATGEREVPS 105 M +V+K + + FN++K+ + +A+ + + + I+ R+ +RE+ Sbjct: 1 MLQVIKRDGTKVDFNKDKITIAIEKAMHSPSGIYVEGQAAEIASEIEE--RSKNKREISI 58 Query: 106 KMIGNLVMEQLKKLDKVA----YIRFASV--YRSFEDIKEFGEEIARLED 149 I +LV +L A Y + SV Y+ ++ + +EI L + Sbjct: 59 YEIEDLVYYKLIDRKNPATAKSYESYKSVQAYKREQNTSD--DEIIGLLN 106 >UniRef50_A6LHE5 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=A6LHE5_PARD8 Length = 735 Score = 80.9 bits (199), Expect = 1e-14, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 9/102 (8%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 VVK + FNEEK+ + + +A+ D I I + GE ++ + I Sbjct: 4 TVVKRDGRIVGFNEEKIVTAIRKAMLHTDKGEDM--QLIRQITDHISFKGEPQMTVEAIQ 61 Query: 110 NLVMEQLK--KLDKVA--YIRF---ASVYRSFEDIKEFGEEI 144 + V +L VA YI + SV R + F E I Sbjct: 62 DAVELELMASSRKDVAQKYIAYRNQRSVARKAKTRDMFLEII 103 >UniRef50_A5M517 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Streptococcus RepID=A5M517_STRPN Length = 185 Score = 77.8 bits (191), Expect = 9e-14, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 41/101 (40%), Gaps = 7/101 (6%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRALEK----RPVSSDDVEMAINHIKSQLRATGER 101 L V K + R F+ +K+ + +A +K P+ + I +++ + + Sbjct: 11 LPTLFVEKRDGRRVVFDVDKIDKALHKAADKVIDVTPLVEKRLNDLTERIITEIHSRFPQ 70 Query: 102 EVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGE 142 + I N+V +L + + A A Y ++ ++F Sbjct: 71 GIKIYEIQNIVEHELLEAKEYA---LAEEYITYRTQRDFER 108 >UniRef50_A6L0X1 Anaerobic ribonucleoside-triphosphate reductase n=24 Tax=Bacteria RepID=A6L0X1_BACV8 Length = 758 Score = 75.9 bits (186), Expect = 4e-13, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 46/95 (48%), Gaps = 10/95 (10%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATG-EREVPSK 106 ++K + RE F+ K+++ + +A + ++ + I I ++ + + + Sbjct: 5 EICIIKRDGKREDFSISKIKNAIGKAFHASGIDNE--DKLIAEITMRVISNFVSPTISVE 62 Query: 107 MIGNLVMEQLKKL-DKVA--YIRFASVYRSFEDIK 138 I +LV ++L K+ +VA YI +YR + + + Sbjct: 63 EIQDLVEKELMKVRPEVAKKYI----IYREWRNTE 93 >UniRef50_C3RPW0 Anaerobic ribonucleoside-triphosphate reductase n=18 Tax=Bacteria RepID=C3RPW0_9MOLU Length = 718 Score = 75.5 bits (185), Expect = 4e-13, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 46/103 (44%), Gaps = 7/103 (6%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 V+ N+ + FN+ K+ S + ++ E + +S + + I + + E+P Sbjct: 2 ELIVIGKNNQHKKFNKNKILSAVQKSAERLNKSLSKEQEDRLIYLVLRNIENLQITEIPV 61 Query: 106 KMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK-EFGEEIARL 147 + +V L +DK A+ YR++ + K +F + + + Sbjct: 62 STMHKIVEVSLDDIDK----DIATSYRNYRNYKQDFVKMLDNV 100 >UniRef50_A8MLU7 Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent n=2 Tax=Alkaliphilus RepID=A8MLU7_ALKOO Length = 784 Score = 73.6 bits (180), Expect = 2e-12, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 11/94 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 M +V+K N FN K+ + + +A+ K V + IK +++ + + Sbjct: 1 MIQVMKRNGRLVEFNPSKITNAIKKAMAETKLGVDHNLSVKITEEIKEKIQNNAKP-IHV 59 Query: 106 KMIGNLVMEQLKKLD--KVA--YIRFASVYRSFE 135 + I ++V L D VA YI +YR+ Sbjct: 60 EEIQDIVEMLLMSSDRKDVAKRYI----IYRNER 89 >UniRef50_A5HXZ1 Anaerobic ribonucleoside-triphosphate reductase n=36 Tax=Clostridium RepID=A5HXZ1_CLOBH Length = 713 Score = 72.8 bits (178), Expect = 3e-12, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 7/102 (6%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMA--INHIKSQLRATGEREVPS 105 M VVK + + F+ K+ + + A E+ + E + ++ + + E+ Sbjct: 1 MLYVVKRDGRKVEFDVVKISNAIKGAAEEIAFDMKESENISLTQKVIKKIEDSNKEEISV 60 Query: 106 KMIGNLVMEQLKK--LDKVAYIRFASVYRSFED-IKEFGEEI 144 + I NLV L ++ Y S YR I+E E+ Sbjct: 61 EDIQNLVEHVLIDSGFKEIGYA--YSNYRRERTKIREIKSEL 100 >UniRef50_Q032I4 Ribonucleoside-triphosphate reductase / ribonucleoside-triphosphate reductase class III catalytic subunit n=156 Tax=Bacteria RepID=Q032I4_LACLS Length = 747 Score = 71.7 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 4/104 (3%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVS-SDDVEMAINHIKSQLRATG 99 ++ L V+K + FN EK+ + +A +K ++ + + + S++ Sbjct: 7 YQDVTLEEINVIKRDGRSVKFNSEKIFDALTKAAKKVELTDMSVLSELTDRVVSEIFTRF 66 Query: 100 EREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEE 143 V I ++V ++L + + + A Y S+ ++ Sbjct: 67 SENVKIYEIQSIVEQELLESGE---TQLAEEYISYRANRDLART 107 >UniRef50_A8MCH3 Ribonucleoside-diphosphate reductase n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MCH3_CALMQ Length = 877 Score = 71.7 bits (175), Expect = 6e-12, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 42/100 (42%), Gaps = 18/100 (18%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE 102 E M V+K N +RE FN KL + + A P E + + SQ+ G+ E Sbjct: 6 TGERTMITVIKRNGLREEFNPVKLLNSLKLAGAPNP------ERILEEVTSQI--KGKGE 57 Query: 103 VPSKMIGNLV---MEQLKKLD----KVA--YIRFASVYRS 133 V S I + V M L D A Y+ F S+Y+ Sbjct: 58 VTSSEISDSVQLMMLNLISEDFKWHDAARNYLLF-SIYKQ 96 >UniRef50_C3WCA1 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WCA1_FUSMR Length = 729 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 36/81 (44%), Gaps = 6/81 (7%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M V+K + F+ +++ M A ++ + + + I +Q+ + + + Sbjct: 1 MKEVIKRDGAIVEFDRDRIVRAMTMAFKQSSGTVN--NELVEKITTQIENMDNKRMHVED 58 Query: 108 IGNLVMEQLKKLDK----VAY 124 I ++V+++L + +AY Sbjct: 59 IQDIVVKKLMASSEKDIAIAY 79 >UniRef50_C7DGU7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DGU7_9EURY Length = 762 Score = 68.6 bits (167), Expect = 6e-11, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 14/93 (15%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE-------KRPVSSDDVEMAINHIKSQLRATGERE 102 V+K +D + F+ K+ + + +A + K E + I ++ ATG++E Sbjct: 4 VVIKRDDSKVDFDRTKIENAVFKAYKSVYDSNVKEAELRKRAENSTTDIVKEIEATGKKE 63 Query: 103 VPSKMIGNLVMEQLKKLDK-VA--YIRFASVYR 132 + + I ++V + L D+ VA YI +YR Sbjct: 64 IRVEEIQDIVEKVLMLKDQTVAKSYI----LYR 92 >UniRef50_Q9UYA0 Ribonucleoside-diphosphate reductase n=2 Tax=Pyrococcus RepID=Q9UYA0_PYRAB Length = 2122 Score = 68.2 bits (166), Expect = 8e-11, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM- 107 +V+K + PF+E ++R + RA+ + V + ++ + +I ++ + ++P Sbjct: 5 KVMKRDGRIVPFDESRIRWAVQRAMWEVGVRDERKLDEVVKNIVKRINELYDGKIPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L +V AYI +YR + E EE R+ + Sbjct: 65 IQDIVELELMRAGLFEVAKAYI----LYRKKK--AEIREEKKRILN 104 >UniRef50_A8PM40 Transcriptional repressor NrdR n=1 Tax=Rickettsiella grylli RepID=A8PM40_9COXI Length = 69 Score = 67.8 bits (165), Expect = 1e-10, Method: Composition-based stats. Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Query: 1 MHC--PFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFE 42 M C P C T+VI+SR EG + RRR C CN+R+T+ E Sbjct: 1 MKCLNPHCDYAKTRVINSRKTEEGKKILRRRHCPKCNKRYTSIE 44 >UniRef50_UPI0001BC56DE anaerobic ribonucleoside triphosphate reductase n=3 Tax=Fusobacterium RepID=UPI0001BC56DE Length = 750 Score = 67.4 bits (164), Expect = 1e-10, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEK--RPVSSDDVEMAINHIKSQLRATG 99 E +V+K + F+ +++ + + A ++ R + E ++ I Q+ Sbjct: 12 ERGNFYGKKVIKRDGTVIDFDAQRIVNAISMAFKQHSRVIP----EELVSKIAHQIENLE 67 Query: 100 EREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIK 138 + + + I +LV+++L + A Y+S+ +K Sbjct: 68 NKIMSVEEIQDLVVKKLMASSE---KDIAMAYQSYRTLK 103 >UniRef50_B5IVI5 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus barophilus MP RepID=B5IVI5_9EURY Length = 1042 Score = 65.1 bits (158), Expect = 7e-10, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM- 107 +V+K + PF+E ++R + RA+ + V + ++ + + ++ + ++P Sbjct: 5 KVMKRDGRIVPFDEGRIRWAIQRAMWEVGVRDEKLLDKVVKDVVGRINELYDGKIPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L V AYI +YR + E EE ++ + Sbjct: 65 IQDIVELELMRNGLFDVAKAYI----LYRKKK--AEIREEKKKILN 104 >UniRef50_A3CYA4 Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CYA4_METMJ Length = 95 Score = 64.7 bits (157), Expect = 9e-10, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 11/86 (12%) Query: 42 EVAELVM---PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT 98 + E V K+N+ E FN +K+R + A + + I Q++ + Sbjct: 4 QQMESRPWQQTMVRKTNNQEEQFNPDKIRRSVQNAGAN--------QQLADEITQQIQGS 55 Query: 99 GEREVPSKMIGNLVMEQLKKLDKVAY 124 + + I N V + LK+ D AY Sbjct: 56 THSGMTTTEIDNSVQDILKQKDMDAY 81 >UniRef50_D1SNH7 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SNH7_9EURY Length = 937 Score = 64.3 bits (156), Expect = 1e-09, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 12/86 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + +E FN KL ++ + V+ D++ I+ + +++ + + Sbjct: 13 ELYVIKRDKRKEKFNVNKLAKSLINS----GVNYGDLDQIISEVCTKVYNG----ITTDE 64 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRS 133 + ++V LKK+DK A YR Sbjct: 65 LKDVVYNILKKIDK----DVAENYRK 86 Score = 45.5 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +V S EPF++EK+ ++R + + + + ++ +L+ + + + MI Sbjct: 90 LKVRTSEKEFEPFDKEKIVKALIR---ETGADKETAQKIADEVERELKKLKVKYLTAPMI 146 Query: 109 GNLVMEQLKK 118 +V +L + Sbjct: 147 REIVNYKLIE 156 >UniRef50_O84834 Ribonucleoside-diphosphate reductase subunit alpha n=148 Tax=cellular organisms RepID=RIR1_CHLTR Length = 1047 Score = 63.9 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 20/107 (18%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRALEK-RPVS-----SDDVEMAINHIKSQLR 96 + +VK N + PF+ ++ + A R + +D+E +I I Q+ Sbjct: 3 DLQEKQCTIVKRNGMFVPFDRNRIFQALEAAFRDTRRIDDHMPLPEDLESSIRSITHQVV 62 Query: 97 ATGEREV------PSKMIGNLVMEQLK--KLDKVA--YIRFASVYRS 133 +++ + I ++V QL L VA YI VYR Sbjct: 63 KEVVQKITDGQVVTVERIQDMVESQLYVNGLQDVARDYI----VYRD 105 Score = 48.5 bits (115), Expect = 7e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 19/110 (17%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSS--------DDVEMAINHIK 92 VV+ FN K+ + + +A + +++ +I Sbjct: 110 HRKKSWQSLSVVRRCGTVVHFNPMKISAALEKAFRATDKTEGMTPSSVREEINALTQNIV 169 Query: 93 SQLRA---TGEREVPSKMIGNLVMEQLKKLDKVA----YIRFASVYRSFE 135 +++ +R + + I ++V +QL + A YI +YR Sbjct: 170 AEIEECCPQQDRRIDIEKIQDIVEQQLMVVGHYAVAKNYI----LYREAR 215 >UniRef50_B1BE54 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE54_CLOBO Length = 705 Score = 63.9 bits (155), Expect = 1e-09, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 13/92 (14%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + FN ++ + + A++ K+ + D N I + ++ + Sbjct: 4 TVIKRDGREVEFNINRIVNAIELAMKDTKQGIEKDLSVHIANDI----SEINKDKITVEE 59 Query: 108 IGNLVMEQLKK-LDKVA--YIRFASVYRSFED 136 I +LV ++L VA YI+ YR+ Sbjct: 60 IQDLVEDKLMDSRKDVAKEYIK----YRNERT 87 >UniRef50_B0KB73 ATP-cone domain protein n=4 Tax=Thermoanaerobacter RepID=B0KB73_THEP3 Length = 85 Score = 63.9 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEK--RPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 +V+K + + F+ +K+ + A + +P+++ D+ I+ ++ G+ ++ Sbjct: 2 KVIKRDGRLQEFDLDKIIRSIGAASDDAGKPLNTSDLHNIARDIEKSIKKLGKEQISFDE 61 Query: 108 IGNLVMEQLKK--LDKVA 123 I +V++ L+K VA Sbjct: 62 IRTIVIDALEKNGFKDVA 79 >UniRef50_B7KYT4 Putative uncharacterized protein n=2 Tax=Methylobacterium extorquens group RepID=B7KYT4_METC4 Length = 128 Score = 63.9 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 20/43 (46%), Positives = 27/43 (62%), Gaps = 2/43 (4%) Query: 1 MHCPFCFAVDTKVIDSRL-VGEGSSVRRRRQCLVCNERFTTFE 42 M CP C + DT++IDSR + +RRRR+C+ C RF T E Sbjct: 1 MICPKC-SADTRLIDSRPHQDDAGVIRRRRKCVACGHRFFTQE 42 >UniRef50_A1RYY0 ATP-cone domain protein n=2 Tax=Thermoproteales RepID=A1RYY0_THEPD Length = 187 Score = 63.6 bits (154), Expect = 2e-09, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 8/77 (10%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 +VVK + E F+ EKL M+ A + ++S++R + Sbjct: 2 PKKVVKRSGKVEEFDREKLVRSMVNA----GAPEEVAVEIAKEVESKVRDGA----TTDE 53 Query: 108 IGNLVMEQLKKLDKVAY 124 I V+ +LK L AY Sbjct: 54 IRRYVLARLKVLAPQAY 70 >UniRef50_A9KQ95 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=Bacteria RepID=A9KQ95_CLOPH Length = 708 Score = 63.2 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE----KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 +VVK + ++ K+ + +A + K ++ D +E I I+ + T E Sbjct: 2 KVVKRDGRVTDYDRNKILVAIRKANDEVDPKEKITEDKIEAIILGIEHLKKDTMYVE--- 58 Query: 106 KMIGNLVMEQLK 117 I +++ ++L Sbjct: 59 -EIQDMIEQKLM 69 >UniRef50_C4IB17 Putative anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium butyricum E4 str. BoNT E BL5262 RepID=C4IB17_CLOBU Length = 91 Score = 63.2 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPV--SSDDVEMAINHIKSQLRATGEREVPSKM 107 V K +E F+ K+R + A + + D+ I++ ++A + E S Sbjct: 2 VVSKKTGKKEEFDISKVRRSIANAGSDCNIMLTESDLLNVCRMIENTMKAMEKEETSSYE 61 Query: 108 IGNLVMEQLKKLD--KV--AYIRFA 128 I LV+ +L++L+ +V +YIR A Sbjct: 62 IFGLVVFKLRELNYTEVVHSYIRGA 86 >UniRef50_B1L7R7 Ribonucleoside-diphosphate reductase n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7R7_KORCO Length = 876 Score = 62.0 bits (150), Expect = 5e-09, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 11/94 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHIKSQLRATGEREVP--SK 106 +VVK + F+ ++R + A+ + ++ + ++ + +T E P + Sbjct: 5 KVVKRDGRVVEFDSFRIRRAIEMAMREVGKFDEAILDKVVKYVLDVIDSTFSDERPPHVE 64 Query: 107 MIGNLVMEQLKKLD--KV--AYIRFASVYRSFED 136 I ++V L K D +V AYI VYR + Sbjct: 65 EIQDIVELALMKYDLFEVAKAYI----VYRKERE 94 >UniRef50_A3MX47 Ribonucleoside-diphosphate reductase n=3 Tax=Pyrobaculum RepID=A3MX47_PYRCJ Length = 853 Score = 61.2 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 17/83 (20%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV+K N EPF EKLR + RA + V D ER+V S Sbjct: 1 MYRVLKLNGSVEPFQPEKLRRSIERAAQDAGVEVDGAADI----------KVERDVGSWE 50 Query: 108 IGNLVMEQLKK-------LDKVA 123 + +LV +L K L +VA Sbjct: 51 LADLVHVELLKKAIERPELAEVA 73 >UniRef50_Q58242 Mja rnr-2 intein n=3 Tax=Methanococcales RepID=Y832_METJA Length = 1750 Score = 61.2 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 40/86 (46%), Gaps = 12/86 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + +E FN KL ++ + V+ D++ I+ + +++ + + Sbjct: 13 EFYVIKRDKRKEKFNVNKLAKSLINS----GVNYGDLDTIISEVCAKVYNG----ITTDE 64 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRS 133 + ++V LKK+DK A YR+ Sbjct: 65 LKDIVYNVLKKIDK----DVAENYRN 86 Score = 42.4 bits (99), Expect = 0.005, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +V S E F++EK+ ++R + + + ++ +L+ + + + MI Sbjct: 90 LKVRTSEKEFESFDKEKIAKALIR---ETGADEETARKIADEVERELKKLKVKYLTAPMI 146 Query: 109 GNLVMEQLKK 118 +V +L + Sbjct: 147 REIVNYKLIE 156 >UniRef50_B2A3V1 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridia RepID=B2A3V1_NATTJ Length = 736 Score = 61.2 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 40/96 (41%), Gaps = 13/96 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD---VEMAINHIKSQLRATGEREVP 104 +VVK + +PF+ K+ + + +AL+ + +D + ++L G + Sbjct: 16 PTKVVKRDGREQPFDPSKITNAIKKALK--AIDKEDHSLALSLTYQVINKLTKHGVDKPT 73 Query: 105 SKMIGNLVMEQLKKLD--KV--AYIRFASVYRSFED 136 I +V L +V AY+ +YR+ D Sbjct: 74 VPQIQEMVENSLMDTGHYEVARAYV----IYRNDRD 105 >UniRef50_C5A3W2 Ribonucleoside-diphosphate reductase n=2 Tax=Thermococcus RepID=C5A3W2_THEGJ Length = 911 Score = 60.5 bits (146), Expect = 1e-08, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM- 107 +V+K + PF+ E++R + RA+ + V D + + + ++ + +VP Sbjct: 5 KVMKRDGRIVPFDRERIRWAIKRAMLEVGVHDDKLLNRVVRRVVRRINELYDGQVPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L +V AYI +YR + E EE ++ + Sbjct: 65 IQDIVELELMRAGLFEVAKAYI----LYRKKK--AEIREEKKKILN 104 >UniRef50_D2LQG3 ATP-cone domain protein (Fragment) n=1 Tax=Aciduliprofundum boonei T469 RepID=D2LQG3_9EURY Length = 305 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 7/103 (6%) Query: 38 FTTFEVA---ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKR-PVSSDDVEMAINHIKS 93 F T + + E + +V+K + F+E+K+ +++A+ +D + + Sbjct: 5 FITRKRSMSEEGEVMKVIKRDGRIVDFSEDKIFQAIMKAMNSIGGYGEEDAQRVTRKVVE 64 Query: 94 QLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFED 136 +++ + + + I ++V E L YI A Y + + Sbjct: 65 KIKESRVERITVEKIQDIVEETLMLE---GYINVAKSYILYRE 104 >UniRef50_P43752 Anaerobic ribonucleoside-triphosphate reductase n=182 Tax=root RepID=NRDD_HAEIN Length = 707 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 14/109 (12%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSD-DVEMAINHIKSQLRATGEREVPSKMIG 109 V+K + R F +++ + + +A +S + + +++ + E+ I Sbjct: 6 VIKRDGSRAEFEIQRIINAIKKAASAVNISDEFYCHQIGQEVGNEIFTRHQGEIDINQIQ 65 Query: 110 NLVMEQLK--KLDKV--AYIRFASVYRSFEDI-----KEFGEEIARLED 149 +V ++L + +V AYI YR D+ + +EI L + Sbjct: 66 KIVEDKLMASRYPEVARAYI----EYRHDRDLAREKRSQLTKEIEGLIE 110 >UniRef50_Q7P4N7 Anaerobic ribonucleoside-triphosphate reductase n=10 Tax=Fusobacterium RepID=Q7P4N7_FUSNV Length = 728 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV+K + F++ ++ + + + E+ S + I I SQ+ ++ + + Sbjct: 1 MKRVIKRDGSVVEFDKSRIINAIKKTFEQA--SREPNMKLIEKIASQVEDLPDKVLAVEQ 58 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEE 143 I ++V+++L + A Y+S+ +K E Sbjct: 59 IQDIVVKKLMGSSE---KDIAMSYQSYRTLKAEIRE 91 >UniRef50_C4ZF10 Anaerobic ribonucleoside-triphosphate reductase n=29 Tax=Bacteria RepID=C4ZF10_EUBR3 Length = 746 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 41/82 (50%), Gaps = 6/82 (7%) Query: 40 TFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRA----LEKRPVSSDDVEMAINHIKSQL 95 + + E+ M +++K + + F+ K+ + + +A L+ +++D +E +++++ Sbjct: 4 SIQRGEIYM-KIIKRSGSEDIFDAAKIVAAIRKANDSVLDYEKLTADQIEEIASNVETAC 62 Query: 96 RATGEREVPSKMIGNLVMEQLK 117 +R + I ++V QL Sbjct: 63 ENM-KRSPSVEEIQDMVENQLM 83 >UniRef50_C0QPQ0 Ribonucleoside-diphosphate reductase n=2 Tax=Hydrogenothermaceae RepID=C0QPQ0_PERMH Length = 847 Score = 60.1 bits (145), Expect = 2e-08, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 13/107 (12%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHIKSQLRATGER-EVP-SK 106 ++ K + PFN EK+ + + +A++ E + +L T + E+P + Sbjct: 4 KIRKRDGRIVPFNPEKITNAIWKAMQAVGEKDFSTAEKISKEVVRELERTLKPGEIPDVE 63 Query: 107 MIGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L +V AYI +YR E +E ++ + Sbjct: 64 QIQDIVERKLIEAGLARVAKAYI----LYRQKR--AEIRKEKQQILN 104 >UniRef50_B1L7E4 ATP-cone domain protein n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L7E4_KORCO Length = 115 Score = 59.3 bits (143), Expect = 4e-08, Method: Composition-based stats. Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 9/95 (9%) Query: 36 ERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQL 95 R + + +V K N E F++ K+ S +++A S + + +S+ Sbjct: 19 FRILRYVGPGDTLTKVRKRNGKEEDFSKMKIVSALIKA----GSSVELADKIAEECESKF 74 Query: 96 RATGEREVPSKMIGNLVMEQLKKLDKVAY---IRF 127 R G V S I V+ +LK+++K +Y +RF Sbjct: 75 R--GREYVESSEIREFVLSRLKEVEKDSYENWLRF 107 >UniRef50_B3EQU4 Anaerobic ribonucleoside-triphosphate reductase n=16 Tax=cellular organisms RepID=B3EQU4_CHLPB Length = 730 Score = 57.4 bits (138), Expect = 1e-07, Method: Composition-based stats. Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 10/99 (10%) Query: 40 TFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRAT 98 T + A +++K + FN EK+ + RAL + + L A Sbjct: 2 TEKKAMGDDAKIIKRDGKVVSFNREKITFALFRALRATGNPDRQYAAELSAQVVASLEAK 61 Query: 99 GEREVPS-KMIGNLVMEQLKK---LDKV-AYIRFASVYR 132 +E PS + I ++V + L + D AYI +YR Sbjct: 62 RAKEPPSVEEIQDVVEKVLFENCAFDAAKAYI----IYR 96 >UniRef50_D0WIV3 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Bacteria RepID=D0WIV3_9ACTN Length = 740 Score = 57.0 bits (137), Expect = 2e-07, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 13/91 (14%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP----VSSDDVEMAINHIKSQLRATGEREVPS 105 +++K N F+ K+ + + A + P ++ + A ++ G V Sbjct: 2 KIIKRNGSEVEFDISKIENAITAANAEVPAAQRLTDRQISYASQNVADACAEAGHA-VSV 60 Query: 106 KMIGNLVMEQLKKLD--KVA--YIRFASVYR 132 + I +LV +++ KLD +VA YI +YR Sbjct: 61 EEIQDLVEDEIMKLDRFEVARKYI----IYR 87 >UniRef50_Q5JJ43 Ribonucleoside-diphosphate reductase n=3 Tax=Thermococcaceae RepID=Q5JJ43_PYRKO Length = 1746 Score = 56.6 bits (136), Expect = 2e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT-GEREVPSKM- 107 +V+K + PF++E++R + RA+ + V + + + + + ++P+ Sbjct: 5 KVMKRDGRIVPFDKERIRWAIQRAMLEVGVRDEKLLNRVVRRVVRRVNELYDGQIPNIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L V AYI +YR + E EE ++ + Sbjct: 65 IQDIVELELMRAGLFDVAKAYI----LYRKKK--AEIREEKKKILN 104 >UniRef50_C7N7G2 Anaerobic ribonucleoside-triphosphate reductase n=49 Tax=cellular organisms RepID=C7N7G2_SLAHD Length = 816 Score = 56.6 bits (136), Expect = 3e-07, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 11/93 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRAT-GEREVP 104 M +VVK + F+ +K+ + +A + + +E+ H+ S + ++ Sbjct: 1 MYQVVKRDGKIVDFSIDKISVAITKAFDALNKQYHPSVIELIALHVTSDFEDKIVDDKIT 60 Query: 105 SKMIGNLVMEQLKKL--DKV--AYIRFASVYRS 133 + I + V + L + V AYI +YR Sbjct: 61 VEDIQDSVEKVLSESGYADVAKAYI----LYRR 89 >UniRef50_D2RBY9 Anaerobic ribonucleoside-triphosphate reductase n=12 Tax=Bacteria RepID=D2RBY9_GARVA Length = 805 Score = 55.9 bits (134), Expect = 4e-07, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 9/98 (9%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKR-----PVSSDDVEMAINHIKSQLRATGERE 102 +V K + F+ + + A + P + +HI+++++ Sbjct: 26 RVQVEKRDGRVVDFDPLNIIMAIKAAFKDLGKEIGPQEEQLIRNISDHIEAEIQDRYNGP 85 Query: 103 VPSKMIGNLVMEQLKK--LDKVAYIRFASVYRSFEDIK 138 + I LV L + L +VA R + YR DI Sbjct: 86 AKIEDIQTLVEHSLIENHLYEVA--RCYTSYRLNRDID 121 >UniRef50_C8SAI5 Restriction endonuclease n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8SAI5_FERPL Length = 261 Score = 55.5 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M RV K + E F+ K+ + + + + E + ++ +L + + Sbjct: 1 MVRVRKKDGRLEEFDRTKVL----KTCLRSGANVEIAEKVLRDVEERLYDG----ITTDE 52 Query: 108 IGNLVMEQLKK 118 I +V+E L K Sbjct: 53 ILEIVIESLLK 63 >UniRef50_B6YVI2 Ribonucleoside-diphosphate reductase n=1 Tax=Thermococcus onnurineus NA1 RepID=B6YVI2_THEON Length = 910 Score = 55.5 bits (133), Expect = 5e-07, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 12/106 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT-GEREVPSKM- 107 +V+K + PF++E+++ + RA+ + V + + + + + +VP Sbjct: 5 KVMKRDGRIVPFDKERIKWAIQRAMLEVGVRDEKLLNRVVRRVVKRVNELYDGQVPHIEN 64 Query: 108 IGNLVMEQLKK--LDKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 I ++V +L + L V AYI +YR + E EE ++ + Sbjct: 65 IQDIVELELMRVGLFDVAKAYI----LYRKKK--AEIREEKKKILN 104 >UniRef50_B7C7M8 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M8_9FIRM Length = 652 Score = 55.5 bits (133), Expect = 6e-07, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 6/102 (5%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD--VEMAINHIKSQLRAT-GEREVP 104 M V K + F+ K+ S + +A + + DD + + + + +A E + Sbjct: 1 MIEVEKRDGSIVDFDPSKIFSAISKAFDSLHMEKDDAIINLLVLRATADFQAKIKENRIS 60 Query: 105 SKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIAR 146 +MI + V K L + Y A Y + +E +I Sbjct: 61 VEMIQDSVE---KTLSESGYYPVAKTYILYRKQRENVRKIQS 99 >UniRef50_B5YJD4 Anaerobic ribonucleoside-triphosphate reductase n=4 Tax=Bacteria RepID=B5YJD4_THEYD Length = 1385 Score = 54.7 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 11/101 (10%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHI----KSQLRATGEREVPS 105 ++K + PF+ EK+ + +A + D + + + +R Sbjct: 5 IIKRDGRIVPFDPEKITVAISKAGKATGEFDYDTAKRLTIKVLLLAEELIRDRDP---HV 61 Query: 106 KMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIAR 146 + I ++V E L Y + A Y + D EIAR Sbjct: 62 EEIQDIVEEILLSSP---YRKTAKAYIIYRDQHARMREIAR 99 >UniRef50_A7I025 Transcriptional repressor NrdR n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I025_CAMHC Length = 62 Score = 54.7 bits (131), Expect = 9e-07, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA 44 M CP+C T VI +G R R+C C F+T E Sbjct: 1 MICPYCANEKTNVI---ATVKGLVNERFRKCPKCGRTFSTIEKI 41 >UniRef50_B8DWG9 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Bacteria RepID=B8DWG9_BIFA0 Length = 808 Score = 54.3 bits (130), Expect = 1e-06, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 37/105 (35%), Gaps = 9/105 (8%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKR-----PVSSDDVEMAINHIKSQL 95 FE V K + F+ + + A P + N I+ ++ Sbjct: 22 FEGMFTDRVLVEKRDGRVVDFDPVNIVVAVKSAFADLDKEVGPQEERMILDIANQIEGEI 81 Query: 96 RATGEREVPSKMIGNLVMEQLKK--LDKVAYIRFASVYRSFEDIK 138 R + I NLV L + L +VA R + YR +DI+ Sbjct: 82 RERYNGPAKIEDIQNLVEHALIEDHLYEVA--RTYTNYRLNKDIQ 124 >UniRef50_UPI0001B41CA5 anaerobic ribonucleoside triphosphate reductase n=3 Tax=Listeria monocytogenes RepID=UPI0001B41CA5 Length = 180 Score = 53.9 bits (129), Expect = 1e-06, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 41/100 (41%), Gaps = 6/100 (6%) Query: 45 ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREV 103 +L V+K + + F+ K+R+ + +++ + + +E + + S+L + ++ Sbjct: 5 QLNEQMVIKRDGRKASFDLIKIRNAVEASMKAINLEDETFLEEILLEVVSELPN--KADM 62 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEE 143 I + V L K Y A Y + ++ E Sbjct: 63 TIDEIQHCVENTLMKS---TYPDVARAYIEYRHDRDHERE 99 >UniRef50_C7MM33 Anaerobic ribonucleoside-triphosphate reductase n=17 Tax=Bacteria RepID=C7MM33_CRYCD Length = 740 Score = 53.5 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 13/97 (13%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE----KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 +V+K N F+ K+ + + +A E + +S + A N++ ++ A G Sbjct: 2 KVIKRNGSEVIFDVTKIVNAIAKANEEVVPENRLSQAQILTAANNVTTECEACGHAP-AV 60 Query: 106 KMIGNLVMEQLKKL--DKVA--YIRFASVYRSFEDIK 138 + I ++V +Q+ L +VA YI +YR ++ K Sbjct: 61 EEIQDMVEDQIMALGCFEVARKYI----IYRYLQNQK 93 >UniRef50_B8G1P5 Anaerobic ribonucleoside-triphosphate reductase n=37 Tax=Bacteria RepID=B8G1P5_DESHD Length = 789 Score = 53.5 bits (128), Expect = 2e-06, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 2/71 (2%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKR-PVSSDDVEMAINHIKSQLRATGEREVPS-KM 107 ++ K + PFN EK+ + + +A + + + L ++VPS + Sbjct: 4 KIRKRDGREAPFNIEKIANAIFKAASATGGKDYQSSLLLAEEVVNYLEVNLHKKVPSVEE 63 Query: 108 IGNLVMEQLKK 118 I + V + L + Sbjct: 64 IQDAVEKILIE 74 >UniRef50_Q18BC3 Putative ribonucleotide-diphosphate reductase n=6 Tax=Clostridium difficile RepID=Q18BC3_CLOD6 Length = 729 Score = 53.2 bits (127), Expect = 3e-06, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 13/93 (13%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQL---RATGEREVP 104 M ++K + +E F++ K+ + +A D I ++ + E+ + Sbjct: 1 MKYIIKRDGTKELFSKSKIEDAVYKASINSEGGVDR--ELAYDISRKIANDYNSMEKCLS 58 Query: 105 SKMIGNLVMEQLKK--LDKVA--YIRFASVYRS 133 + I ++V L + +A YI +YR Sbjct: 59 VEEIQDIVEVLLMESNRKDIAKHYI----LYRE 87 >UniRef50_A0B8R8 Ribonucleoside-diphosphate reductase n=2 Tax=Methanomicrobia RepID=A0B8R8_METTP Length = 688 Score = 52.4 bits (125), Expect = 4e-06, Method: Composition-based stats. Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 2/71 (2%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDV-EMAINHIKSQLRATGEREVPS-KM 107 R+ K + F+ ++ + +A + + + + E+PS + Sbjct: 15 RIRKRDGRIVDFDPSRISRAISKAFNALGIVDEKTPVELAGRVVDVVDERFRDEIPSVED 74 Query: 108 IGNLVMEQLKK 118 + ++V E L Sbjct: 75 VQDIVEEVLID 85 >UniRef50_D1BVJ9 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BVJ9_XYLCX Length = 765 Score = 52.0 bits (124), Expect = 6e-06, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 7/95 (7%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRA---LEKRPVSSDDVEMAINHIKSQLRATGEREVPS 105 P V+K + R ++ ++R + A V ++ + + ++ +V Sbjct: 23 PTVIKRDGTRTTYDLRRVRDAIRPAWMRAWDDAVDESELAAVVAAVDGEIFRRFPTDVKV 82 Query: 106 KMIGNLVMEQLKKL--DKVAYIRFASVYRSFEDIK 138 I +V + L + VA I +A+ YR +D++ Sbjct: 83 YEIQAIVEQTLIETGHGDVAEI-YAT-YRLEKDLR 115 >UniRef50_C8WK91 Ribonucleoside-diphosphate reductase n=27 Tax=Bacteria RepID=C8WK91_EGGLE Length = 845 Score = 51.6 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 9/91 (9%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP--VSSDDVEMAINHIKSQLRATGERE---VP 104 ++ K N E + K++ M A + ++ + I I+ + + + E V Sbjct: 2 QISKRNGTVEAYEAGKIKRAMGAAFASVGKVLDDEEADRLIARIERAMASAEQGEGGSVS 61 Query: 105 SKMIGNLVMEQLKKLDKVAYIRFAS--VYRS 133 + + +LV L + + Y S +YR Sbjct: 62 VEDVQDLVERALMEANH--YEELKSYILYRE 90 >UniRef50_C1DPR2 Ribonucleoside-diphosphate reductase n=14 Tax=cellular organisms RepID=C1DPR2_AZOVD Length = 1338 Score = 51.6 bits (123), Expect = 7e-06, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 39/101 (38%), Gaps = 18/101 (17%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRAL----EKRPVSSDDVEMAINHIKSQLRATGEREVP 104 RV+K N + ++K+ + +A +S + + + Q+ T R +P Sbjct: 32 LRVIKRNGTVVAYTDDKITVAITKAFLAVEGGTAAASSRIHETVARLTEQVTTTFRRRMP 91 Query: 105 S------KMIGNLVMEQLKKLDK--VA--YIRFASVYRSFE 135 S + I + V L + + VA Y+ +YR Sbjct: 92 SGGTIHIEEIQDQVELALMRAGEHKVARDYV----IYREAR 128 >UniRef50_D1JM33 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM33_9BACE Length = 733 Score = 51.6 bits (123), Expect = 8e-06, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 35/98 (35%), Gaps = 9/98 (9%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE-VPSKMI 108 +V K F+ EK+ + + +A + + V D + + + T V + I Sbjct: 2 KVQKRTGQIVDFDLEKIGNAIKKAFDSKQVEYDP--AIVKSVDKLISLTYTNVPVSVETI 59 Query: 109 GNLVMEQLKKLDKVAYIRFAS---VYRSFEDIKEFGEE 143 + V L + Y A +YR F +E Sbjct: 60 QDYVERVLMQF---GYYDIAKTFILYREQRKSTRFVKE 94 >UniRef50_B6WBR4 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=B6WBR4_9FIRM Length = 130 Score = 51.2 bits (122), Expect = 1e-05, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%) Query: 41 FEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPV--SSDDVEMAINHIKSQLRAT 98 E V K N E F+ EK+ + A + ++ D+ + N ++ ++ Sbjct: 34 IENFLDNKLYVKKRNGKIELFDVEKISRSIKNAARNGNIELNTSDISILKNDLEKIIKKN 93 Query: 99 GEREVPSKMIGNLVMEQLKK 118 R +P+ I V L++ Sbjct: 94 HHRILPTATIKEYVENILEE 113 >UniRef50_Q9L646 Anaerobic ribonucleoside-triphosphate reductase n=233 Tax=root RepID=NRDD_SALTY Length = 712 Score = 50.8 bits (121), Expect = 1e-05, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 P V+K + + PF E+++ +LRA + V D + + S + +V I Sbjct: 3 PHVMKRDGCKVPFKSERIKEAILRAAKAAGVDDADYCATVAEVVSS-QMNARSQVDINEI 61 Query: 109 GNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEE 143 V QL Y + A Y + ++ E Sbjct: 62 QTAVENQLMSGP---YKQLARAYIEYRHDRDIQRE 93 >UniRef50_A4VUA6 Oxygen-sensitive ribonucleoside-triphosphate reductase n=65 Tax=Streptococcus RepID=A4VUA6_STRSY Length = 124 Score = 50.5 bits (120), Expect = 2e-05, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 7/97 (7%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD----VEMAINHIKSQLRATGEREVPS 105 +V+K + F+ +K+ +++A + V + + + L Sbjct: 14 QVIKRSGEIVEFDPDKIYQAIIKAAQTVYVIDETWRKNLAQVTKKVVLDLEEAHTERPTI 73 Query: 106 KMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGE 142 M+ + V +L YI A Y S+ ++ Sbjct: 74 SMVQSQVEHRLLD---AGYISIAEHYISYRLQRDLER 107 >UniRef50_C5VLT4 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C5VLT4_9BACT Length = 719 Score = 49.7 bits (118), Expect = 3e-05, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 16/110 (14%) Query: 44 AELVMPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGER 101 E+ + K + ++ F+ +K+ + +L+A E P + I ++ + Sbjct: 1 MEMKNFTITKRDGSKDRFSLDKIMNAILKAFESVNEPTDLGTLSKIIANL------NIQN 54 Query: 102 EVPSKMIGNLVMEQLKKLDKVAYIRFAS---VYRSFEDIKEFGEEIARLE 148 ++ + I N V L K Y + A VYR E + +++ Sbjct: 55 DIKVEDIQNQVELALMKE---GYYQVAKSFIVYRQQHTED--RETLEKMK 99 >UniRef50_C7RFT0 Putative uncharacterized protein n=2 Tax=Anaerococcus RepID=C7RFT0_ANAPD Length = 132 Score = 49.3 bits (117), Expect = 4e-05, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 34/71 (47%), Gaps = 2/71 (2%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRAL--EKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K + E F+++K+ + A EK +++ D+ + ++ + L + + + Sbjct: 45 YVIKRSGSVEKFSKDKIERSIKNAAGDEKAAMNTSDLAIIVDDVLDTLDSDPRKVYKTSE 104 Query: 108 IGNLVMEQLKK 118 I N + + L K Sbjct: 105 IKNYIKDSLLK 115 >UniRef50_B2VQ43 Putative uncharacterized protein n=2 Tax=unclassified Caudovirales RepID=B2VQ43_9CAUD Length = 60 Score = 48.9 bits (116), Expect = 4e-05, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA 44 M CP C TKV+D R + V+RRR+C C RF T E Sbjct: 1 MRCPICG-GRTKVLDVR--EKRDKVKRRRECSDCLTRFNTEEKL 41 >UniRef50_C8P1M7 Anaerobic ribonucleoside-triphosphate reductase n=6 Tax=Bacteria RepID=C8P1M7_ERYRH Length = 783 Score = 48.9 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 18/118 (15%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLR---ALEKRPVSSDDVEMAINHIKSQLRATGERE 102 L ++K ++ + FN EK+ + + +LE S+DD + Q+ E Sbjct: 7 LEKITILKRDNQKMKFNGEKIAIAIKKGFDSLESNKYSNDDANHVYMEVLKQIEEIATHE 66 Query: 103 --VPSKMIGNLVMEQLKKLD--KVAYIRFASVYRSFEDIK---------EFGEEIARL 147 + + I +L+ +L + + V Y F S YR+ + +F + I +L Sbjct: 67 DYISIEHIQDLIERELLRQNYTDV-YESF-SQYRNRRNESRKIFISKQHKFLKAIEKL 122 >UniRef50_O83972 Ribonucleoside-diphosphate reductase subunit alpha n=48 Tax=Bacteria RepID=RIR1_TREPA Length = 845 Score = 48.9 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 15/104 (14%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDD---VEMAINHIKSQLRATGEREVPS 105 ++K N +P+ EK+ + A + P++ + + ++ QL VP Sbjct: 3 IIKRNGEPQPYMREKIIVAISAAFRSVQNPLAPEVPAIITDLAAEVERQLFEMNRAGVPV 62 Query: 106 KM--IGNLVMEQLKK---LDKV-AYIRFASVYRSFEDIKEFGEE 143 + I + V + L K D+V ++I +YR K E Sbjct: 63 HVEKIQDFVEKTLTKYNHSDEVKSFI----LYRDDRTKKRIARE 102 >UniRef50_A4FZY4 Anaerobic ribonucleoside-triphosphate reductase n=9 Tax=Methanococcales RepID=A4FZY4_METM5 Length = 791 Score = 48.9 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 8/73 (10%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 VVK + E FN KL +L + V ++++ ++ I S++ + + + Sbjct: 33 INVVKRSGNEELFNVNKLVKSLLNS----GVDYENIDAILSEIYSKVYNG----MSTDDL 84 Query: 109 GNLVMEQLKKLDK 121 ++ + LK+ DK Sbjct: 85 KTILYKTLKEYDK 97 Score = 41.2 bits (96), Expect = 0.010, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 59 EPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 EPFN+EK+ ++ ++ E ++S+++ + + MI +V +L + Sbjct: 123 EPFNKEKIVKALI---QEAGADIKTAERIAVEVESEVKNLTVNYLTAPMIREIVNTKLIE 179 >UniRef50_A9A645 Ribonucleoside-diphosphate reductase n=10 Tax=cellular organisms RepID=A9A645_NITMS Length = 884 Score = 48.9 bits (116), Expect = 5e-05, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 12/101 (11%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRP-VSSDDVEMAINHIKSQLRATG-- 99 E + + K + FN++K+ + + +AL + +++ ++L G Sbjct: 5 QIENTINEIRKRSGAVTAFNKDKISNAIYKALAATSKADRGLADQLADNVVNKLVEQGFT 64 Query: 100 -EREVPSKMIGNLVMEQLKKL--DKV--AYIRFASVYRSFE 135 R + I ++V L + AYI VYR Sbjct: 65 STRSPTVEDIQDIVESTLIDSGNSDIAKAYI----VYRHER 101 >UniRef50_A1KG47 Ribonucleoside-diphosphate reductase n=20 Tax=Mycobacterium RepID=A1KG47_MYCBP Length = 710 Score = 48.2 bits (114), Expect = 9e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 10/90 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 +V + + PF+ ++ + + RA + D+ + + A G P + Sbjct: 6 PAKVRRRDGTLVPFDIARIEAAVTRAAREVACDDPDMPGTVAKAVAD--ALGRGIAPVED 63 Query: 108 IGNLVMEQLKK--LDKVA--YIRFASVYRS 133 I + V +L + LD VA YI +YR Sbjct: 64 IQDCVEARLGEAGLDDVARVYI----IYRQ 89 >UniRef50_A9KI88 Anaerobic ribonucleoside-triphosphate reductase n=81 Tax=Bacteria RepID=A9KI88_CLOPH Length = 800 Score = 47.8 bits (113), Expect = 1e-04, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 13/109 (11%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRP--VSSDDVEMAINHIKSQLRATGE-REVP 104 M +VVK + F K+ S + +A + D + + + S + + V Sbjct: 1 MIKVVKRDGEIAEFALSKISSAIAKAFNATQKLYNEDIINLLSLRVTSDFQTKLKDSTVT 60 Query: 105 SKMIGNLVMEQLKKL--DKV--AYIRFASVYRSFEDIKEFGEEIARLED 149 + I + V L++ V AYI +YR ++ ++ + + D Sbjct: 61 VEDIQDSVEHVLEQSGYTDVAKAYI----LYR--KNREKIRNMKSTILD 103 >UniRef50_UPI0001BCE5C3 transcriptional repressor NrdR n=3 Tax=Campylobacter fetus subsp. venerealis str. Azul-94 RepID=UPI0001BCE5C3 Length = 61 Score = 47.4 bits (112), Expect = 1e-04, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMP 49 M CPFC T+V+ +G RR R C C + F T E + Sbjct: 1 MICPFCANDKTRVV---ATIKGLENRRFRYCFKCKKTFETSESVLIKEL 46 >UniRef50_D2MLR7 ATP cone domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLR7_9FIRM Length = 511 Score = 47.0 bits (111), Expect = 2e-04, Method: Composition-based stats. Identities = 15/87 (17%), Positives = 37/87 (42%), Gaps = 7/87 (8%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALE--KRPVSSDDVEMAINHIKSQLRATGERE-VP 104 M +V K ++ F +K+++ + +A K+ + S +++ + + + Sbjct: 1 MWKVKKRDNSLTEFEMDKIKTAIKKAFHGSKKRIHSSVLDLLAIRAVADFEDKMVDDVIS 60 Query: 105 SKMIGNLVMEQLKK--LDKV--AYIRF 127 + I + V L + +V AYI + Sbjct: 61 VEDIQDSVEHVLSECGYSEVAKAYILY 87 >UniRef50_UPI00003827C9 COG1328: Oxygen-sensitive ribonucleoside-triphosphate reductase n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003827C9 Length = 96 Score = 46.6 bits (110), Expect = 2e-04, Method: Composition-based stats. Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 5/77 (6%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEK-----RPVSSDDVEMAINHIKSQLRATGEREV 103 V+K + R PF++ ++R+ + +A + V ++ + +++ A + V Sbjct: 18 LEVLKRDGRRRPFDDARIRAAVTKAFAEVHGDLTATHRRRVAEVVDRVDAEIAARFDATV 77 Query: 104 PSKMIGNLVMEQLKKLD 120 I +V L Sbjct: 78 KIYEIQGVVEHVLLDRK 94 >UniRef50_C3N5F1 Ribonucleoside-diphosphate reductase n=12 Tax=Sulfolobaceae RepID=C3N5F1_SULIA Length = 838 Score = 46.6 bits (110), Expect = 3e-04, Method: Composition-based stats. Identities = 12/73 (16%), Positives = 32/73 (43%), Gaps = 9/73 (12%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPS 105 L +V+K + + F EK+ S + V + + +N +++ ++ + + Sbjct: 10 LRKIKVIKRDGRVDEFKLEKILSKL------SSVPDEVTDGIVNDVQANVKDNA---IDT 60 Query: 106 KMIGNLVMEQLKK 118 + I ++V L + Sbjct: 61 RAIADIVERNLIE 73 >UniRef50_O66503 Ribonucleoside-diphosphate reductase subunit alpha n=1 Tax=Aquifex aeolicus RepID=RIR1_AQUAE Length = 801 Score = 46.2 bits (109), Expect = 4e-04, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 7/62 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 V+K + +E + K+R + A E V ++E +Q++ + +K I Sbjct: 4 YVIKRSGRKEKLDINKIRIAIKFACEGLNVDPLELEA-----DAQIQFRDG--ITTKEIQ 56 Query: 110 NL 111 L Sbjct: 57 QL 58 >UniRef50_B1YDP3 ATP-cone domain protein n=16 Tax=Archaea RepID=B1YDP3_THENV Length = 91 Score = 45.8 bits (108), Expect = 4e-04, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 M +VVK + E F EK+ +L+A D ++ + V ++ Sbjct: 1 MVKVVKRDGRTEEFIPEKIVVSVLKA----GAPVDVARKIARKVECAVMEREN--VTAQE 54 Query: 108 IGNLVMEQLKKLDKVAY 124 + +++ +LKK ++ Y Sbjct: 55 LTRMILAELKKANEQWY 71 >UniRef50_A6TN19 Anaerobic ribonucleoside-triphosphate reductase n=23 Tax=cellular organisms RepID=A6TN19_ALKMQ Length = 710 Score = 45.5 bits (107), Expect = 5e-04, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 29/73 (39%), Gaps = 6/73 (8%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE----KRPVSSDDVEMAINHIKSQLRATGEREVPS 105 +V K N F+ K++ + A + K +++ + I S+ A Sbjct: 5 KVQKRNGEIVDFDAIKIKEAIFSAAKSVGGKDEMTASRLSKLAVDIVSETYAANIP--SV 62 Query: 106 KMIGNLVMEQLKK 118 + I ++V + L + Sbjct: 63 EDIQDIVEKVLIE 75 >UniRef50_A6L4X5 Oxygen-sensitive ribonucleoside-triphosphate reductase n=10 Tax=Bacteroidales RepID=A6L4X5_BACV8 Length = 697 Score = 45.5 bits (107), Expect = 6e-04, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 ++K + +E F+ +K+++ + +A V S + I + S++ + V + Sbjct: 5 EVFIIKRDGKKETFSLDKIKNAIAKAFL--SVGSFATQDVITTVLSRVSVSDGMNV--EE 60 Query: 108 IGNLVMEQLK 117 I N V L Sbjct: 61 IQNQVEVALM 70 >UniRef50_B0RZP1 Putative uncharacterized protein n=2 Tax=Finegoldia magna RepID=B0RZP1_FINM2 Length = 127 Score = 45.1 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRP--VSSDDVEMAINHIKSQLRATGEREVPSKMI 108 V+K E F++EK+ + + + +++ DV + + + ++++ P+ I Sbjct: 45 VLKKLGSVESFDKEKIFHSIAQTSDSSGAKMNASDVNIIVEDVLKKMKSIKRNVYPTTEI 104 Query: 109 GNLVMEQLKK 118 V E LK+ Sbjct: 105 RGYVEEALKE 114 >UniRef50_A4J2C9 Ribonucleoside-triphosphate reductase class III catalytic subunit n=7 Tax=Bacteria RepID=A4J2C9_DESRM Length = 676 Score = 45.1 bits (106), Expect = 6e-04, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 15/110 (13%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVE-MAINHIKSQLRATGEREV-PSKM 107 +V K + FNE K+ + RA + + L+ + + Sbjct: 4 KVRKRDGREVAFNETKITEAIFRAAKAVGGEDRQTAMELTLDVLKMLKKQYNGNLFGVEE 63 Query: 108 IGNLVMEQLKKLDKV----AYIRFASVYRSFED-----IKEFGEEIARLE 148 + ++V + L + AYI +YR+ + + + + Sbjct: 64 VQDMVEKVLIESGHARTAKAYI----LYRAQRTRLRDARSDLMDAVEEIL 109 >UniRef50_C6JR80 Ribonucleoside-triphosphate reductase n=2 Tax=Fusobacterium RepID=C6JR80_FUSVA Length = 748 Score = 45.1 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 3/69 (4%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEK-RPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 V+K N FN+EK+ + + ++ + + +E +N I ++ G + + Sbjct: 4 IEVIKRNGSIVTFNKEKIEKVLEKIDKEVKFIDKVSIEHMMNDIVKKI--NGNTRMSVEA 61 Query: 108 IGNLVMEQL 116 I ++V L Sbjct: 62 IQDIVFYTL 70 >UniRef50_C6BJE1 Anaerobic ribonucleoside-triphosphate reductase n=20 Tax=Bacteria RepID=C6BJE1_RALP1 Length = 687 Score = 45.1 bits (106), Expect = 7e-04, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 11/89 (12%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEM--AINHIKSQLRATGEREVPSKM 107 +V K + PF+ +K+R + A + D +E + + + L + ++ Sbjct: 9 QVTKRDGSLAPFDAQKIRQAIAAAGQATG-EFDTIEAQHLTSGVVAHLAPLPCPGI--EI 65 Query: 108 IGNLVMEQLKKLDKVAYIRFAS---VYRS 133 I N V E L Y R A VYR Sbjct: 66 IQNCVEEVLVD---AGYWRTARAYIVYRE 91 >UniRef50_A2RN49 High confidence in function and specificity n=4 Tax=Lactococcus lactis RepID=A2RN49_LACLM Length = 105 Score = 45.1 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 49/100 (49%), Gaps = 7/100 (7%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRAL-----EKRPVSSDDVEMAINHIKSQLRATGE 100 LV V+K N ++ ++++ + +A + +P+ ++ + + + ++ A Sbjct: 5 LVNKVVIKRNGHVVDWDSFRIQTAVFKAAINGKYKDKPLHANMIANNVTKVVEKVIAELS 64 Query: 101 RE-VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKE 139 E + + I N V++QL DK F + Y++ ++I++ Sbjct: 65 FEKIEIETIQNQVIKQLNDFDKDVARDFLA-YKTKQNIEQ 103 >UniRef50_C8XUI7 NrdA ribonucleoside-diphosphate reductase alpha subunit n=1 Tax=Shigella phage phiSboM-AG3 RepID=C8XUI7_9CAUD Length = 759 Score = 45.1 bits (106), Expect = 8e-04, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 24/116 (20%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEK-RPVSSDDVEMAINHIKSQLRATGEREVPSK 106 M V+K + PF+ EK + RA + VS +V A S+++ T + + Sbjct: 1 MINVIKRDGSSVPFDIEKPHEVVDRACDGLTGVSMSEVIAA-----SKIQFTDN--MRTD 53 Query: 107 MIGNLVME---QLKKLDKVAY----IRFAS------VYRSFE---DIKEFGEEIAR 146 I +++++ L +DK Y R S VY ++ + F + I + Sbjct: 54 RIQDILIQAAASLISVDKPNYQYVAARLKSYDLRKAVYGQYKPPHLLDIFVKNIKQ 109 >UniRef50_C8NQX8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Corynebacterium efficiens RepID=C8NQX8_COREF Length = 728 Score = 44.7 bits (105), Expect = 8e-04, Method: Composition-based stats. Identities = 12/88 (13%), Positives = 31/88 (35%), Gaps = 8/88 (9%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPSKM 107 V+K + + K+ + + A + + I ++ + ++ Sbjct: 16 LSVLKKDGRVVDYRPRKILNSLEAAERTSGEPLHAPSDQLLGEITRRV--AEHHIISTED 73 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFE 135 + LV + L + V A+ YR ++ Sbjct: 74 LSRLVEQTLAQSPAV----LAA-YRDYQ 96 >UniRef50_D1BHZ8 Ribonucleoside-triphosphate reductase class III catalytic subunit n=23 Tax=Bacteria RepID=D1BHZ8_SANKS Length = 754 Score = 44.7 bits (105), Expect = 0.001, Method: Composition-based stats. Identities = 17/99 (17%), Positives = 33/99 (33%), Gaps = 13/99 (13%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEM-----AINHIKSQLRATGEREV 103 P V+K + ++ ++ + A V + + +++ V Sbjct: 30 PAVLKRDGRVAEYDPARVERALTSAFADVHVGPAQLVRPAVLGLTEQVGAEIARRFTDTV 89 Query: 104 PSKMIGNLVMEQLKKLD--KV--AYIRFASVYRSFEDIK 138 I N+V L + +V AYI YR D+ Sbjct: 90 QIYEIQNVVEHVLLESRHYEVAEAYIA----YRVRRDVA 124 >UniRef50_B0RGP9 Ribonucleoside-diphosphate reductase n=15 Tax=Bacteria RepID=B0RGP9_CLAMS Length = 834 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 4/67 (5%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKM 107 VVK + +EP++ ++ + A + + V + ++ L + ++ Sbjct: 2 SITVVKRDGSKEPYDANRINLAIEDATQGLDENIGWVTQIASELEITLFDG----ITTQQ 57 Query: 108 IGNLVME 114 + V++ Sbjct: 58 LDEAVIQ 64 >UniRef50_B2UYR3 Putative uncharacterized protein n=3 Tax=Clostridium botulinum RepID=B2UYR3_CLOBA Length = 89 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEK--RPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 ++K N E F K+R +L A E+ P+S ++++ + + L E S + Sbjct: 3 IIKKNGRIEEFKISKVRQSILSASEEVTEPLSDAELKLIEKEVNNILSKLNRTETSSYEV 62 Query: 109 GNLVMEQLKKL 119 + + L +L Sbjct: 63 FGICLNALNEL 73 >UniRef50_A3CW86 Putative uncharacterized protein n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CW86_METMJ Length = 102 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 8/75 (10%) Query: 47 VMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSK 106 + VVK++ REPF EK + + K ++ ++ +PS Sbjct: 10 ELVDVVKADGRREPFVREK----VTVSALKSGAPPEEARAIGEAVERIAYDG----MPSG 61 Query: 107 MIGNLVMEQLKKLDK 121 I V+EQL + Sbjct: 62 EIRRRVLEQLHDRNP 76 >UniRef50_B3QGB6 Anaerobic ribonucleoside-triphosphate reductase n=5 Tax=Bacteria RepID=B3QGB6_RHOPT Length = 673 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 12/98 (12%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEM--AINHIKSQLRATGE 100 + ++K + F K+RS + RA + ++E + + Sbjct: 5 DLTNLPRAIIKRSGAEAAFASAKIRSAIARAGQATG-EFGELEAGLLTSQSVKVIAHRFA 63 Query: 101 REVP-SKMIGNLVMEQLKKLDKV----AYIRFASVYRS 133 VP + I ++V + L + + AYI VYR Sbjct: 64 GAVPQIEQIQDIVEQVLISANHLTTARAYI----VYRE 97 >UniRef50_UPI0001C41C69 anaerobic ribonucleoside-triphosphate reductase NrdD n=1 Tax=Methanobrevibacter ruminantium M1 RepID=UPI0001C41C69 Length = 780 Score = 44.3 bits (104), Expect = 0.001, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%) Query: 38 FTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRA 97 + V K+N V E F+ EKL ++ + + P E ++ + L Sbjct: 15 YNVENDIRKAKITVKKNNGVCEAFSYEKLLKSLV--MVEAPYFES--EKIVSTVVENLYD 70 Query: 98 TGEREVPSKMIGNLVMEQLKKLDKVA 123 + +K I +V E L+++D A Sbjct: 71 G----ITTKEIKKIVYECLEEVDSEA 92 >UniRef50_Q0SSR4 Putative uncharacterized protein n=10 Tax=Clostridium RepID=Q0SSR4_CLOPS Length = 89 Score = 43.9 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRP--VSSDDVEMAINHIKSQLRA--TGEREVPSK 106 ++K + E F EKL + + A ++ D+ + ++ L+ E S Sbjct: 3 IIKKDGRIEEFKIEKLSTSLSNAASDLNFTLNKSDINIIAKDVEETLKKIRKDNGETSSY 62 Query: 107 MIGNLVMEQLK--KLDKV--AYIRF 127 + +V++ LK K V AY+++ Sbjct: 63 EVIGVVIDTLKNEKFSDVLRAYVKY 87 >UniRef50_A4CGY5 Putative uncharacterized protein n=3 Tax=Bacteroidetes RepID=A4CGY5_9FLAO Length = 283 Score = 43.9 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 12/84 (14%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +V K + E F+ KL + + R+ V V+ + ++ + + +K I Sbjct: 4 IQVKKYSGEMEAFDMNKLVNSLRRS----QVDESLVQQIAHEVEGNIEDG----MTTKKI 55 Query: 109 GNLVMEQLKKLDKVAYIRFASVYR 132 + LK +V+ AS Y+ Sbjct: 56 YQMAFRMLKSRARVS----ASRYK 75 >UniRef50_B8DLP5 Anaerobic ribonucleoside-triphosphate reductase n=15 Tax=Desulfovibrio RepID=B8DLP5_DESVM Length = 704 Score = 43.9 bits (103), Expect = 0.001, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 11/91 (12%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDV-EMAINHIKSQLRATGEREVPSK 106 + K + E ++ +++ + +AL+ + + + ++++L E + Sbjct: 2 PQHIRKRDGRVETWSVDRVGHAINKALKASGIKDPLLGKRLAQRVEAKLDGVDMPE--QE 59 Query: 107 MIGNLVMEQLKK--LDKVA--YIRFASVYRS 133 + +LV L + L VA YI +YR Sbjct: 60 QVQDLVQRVLMEARLYAVAERYI----IYRE 86 >UniRef50_UPI00016B22AF hypothetical protein cdivTM7_00107 n=1 Tax=candidate division TM7 single-cell isolate TM7b RepID=UPI00016B22AF Length = 93 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 7/94 (7%) Query: 47 VMPRVVKSNDV-REPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRA--TGEREV 103 + RV+K ++ +E F+ +KL+ + A + + N + + + + Sbjct: 3 KIVRVIKMSNRDQEDFDSKKLQKSIDSACLSISLPKGESRQISNLVVHDVNKWLNNKEVI 62 Query: 104 PSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDI 137 S+ I E+L A A +Y+ +++I Sbjct: 63 TSRDIRQAAYEKLLIYQPDA----AYIYKQYKNI 92 >UniRef50_O26580 Putative uncharacterized protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26580_METTH Length = 90 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 6/87 (6%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT--GEREVPSKMI 108 V+K REP+ K+R+ + +A S ++ I + ++ E E+ S I Sbjct: 3 VIKRRGFREPYEPSKIRASLEKAAIDAGYSPEEKREIIERVYETVKKKIEVEEEIKSDTI 62 Query: 109 GNLVMEQLKKLDKVAYIRFASVYRSFE 135 ++ +L + + YI A +R FE Sbjct: 63 RACLLTELDRCEP--YI--AKSWRRFE 85 >UniRef50_C2BEU7 Putative uncharacterized protein n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BEU7_9FIRM Length = 134 Score = 43.5 bits (102), Expect = 0.002, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRP--VSSDDVEMAINHIKSQLRATGEREVP-SK 106 VVK N E FN +KL + A + ++S D+ + + + +L ++ + + Sbjct: 45 YVVKKNGNLEKFNADKLSRSIKNAADMAGMQLNSSDIAIILKDVADKLFHGDKKRLTRTN 104 Query: 107 MIGNLVMEQL 116 + N+V++ L Sbjct: 105 EVRNIVIDTL 114 >UniRef50_A7NFN4 Ribonucleoside-triphosphate reductase n=3 Tax=Chloroflexi (class) RepID=A7NFN4_ROSCS Length = 769 Score = 43.1 bits (101), Expect = 0.002, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 29/72 (40%), Gaps = 2/72 (2%) Query: 47 VMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDD-VEMAINHIKSQLRATGEREVPS 105 V ++K + PF+ ++ + M R + D + + + + A + + P+ Sbjct: 26 VPTTIIKRDGRVVPFDVTRIENAMARCFASFGRTPDTPIPELAQRVVNIVAAKSQGKPPT 85 Query: 106 KM-IGNLVMEQL 116 + ++V L Sbjct: 86 VEGVQDIVEMVL 97 >UniRef50_C9LGY8 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Prevotella RepID=C9LGY8_9BACT Length = 727 Score = 43.1 bits (101), Expect = 0.003, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 32/80 (40%), Gaps = 8/80 (10%) Query: 40 TFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRAL--EKRPVSSDDVEMAINHIKSQLRA 97 T + + K + E F+ +K++S +L+A +P+ + ++ I H+ Sbjct: 22 TRKPMCTENFIITKRDGTTERFSLDKIKSAILKAFTSLHQPIDAQGLQRVIEHL------ 75 Query: 98 TGEREVPSKMIGNLVMEQLK 117 + + I N V L Sbjct: 76 RFCNGMSVEDIQNQVEVALM 95 >UniRef50_A5UN10 Anaerobic ribonucleoside-triphosphate reductase, NrdD n=5 Tax=Methanobacteriaceae RepID=A5UN10_METS3 Length = 776 Score = 42.8 bits (100), Expect = 0.003, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 9/83 (10%) Query: 42 EVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGER 101 E+A V K+N ++E F+ EKL ++ + + P + + + S L Sbjct: 14 ELANSKKINVEKNNGIKERFSYEKLLKSLV--MVETPFFES--DKIVAQVVSSLYDG--- 66 Query: 102 EVPSKMIGNLVMEQLKKLD-KVA 123 + +K I +V E L+ +D ++A Sbjct: 67 -IKTKEIKKIVYECLEDIDGEIA 88 >UniRef50_Q0W698 Anaerobic ribonucleoside-triphosphate reductase (Glycyl-dependent) n=2 Tax=Archaea RepID=Q0W698_UNCMA Length = 780 Score = 42.8 bits (100), Expect = 0.004, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +VKS++ E F+ K+ ++ K V I L+ + +K + Sbjct: 15 LYIVKSDNRVELFDANKVVVSLI----KSGVDY----RLACDIVDDLQYRVHDGITTKAL 66 Query: 109 GNLVMEQLKKLDKVAYIRFA 128 +++ + + A +R+ Sbjct: 67 RTILLNIIDQKSPDAALRYK 86 >UniRef50_A4WLF4 Ribonucleoside-diphosphate reductase n=2 Tax=Thermoproteaceae RepID=A4WLF4_PYRAR Length = 1240 Score = 42.4 bits (99), Expect = 0.004, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 9/68 (13%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 V K + EPF+ EKL+ + +A V ++ +K ++ V S + + Sbjct: 3 VNKLDGRVEPFSMEKLKISIAKAGADVGVDTNV--DVSLEVKKEV-------VWSWELAD 53 Query: 111 LVMEQLKK 118 +V +L K Sbjct: 54 MVQLELLK 61 >UniRef50_B2V806 Ribonucleoside-diphosphate reductase n=2 Tax=Aquificales RepID=B2V806_SULSY Length = 850 Score = 42.0 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 VVK + +E F +KL + LE + D + I +L V ++ + Sbjct: 9 VVKRDGTQEKFQMKKLVDAIFALLEGLDLPDDY--EIVFKITKELDLKIPEVVTTEELDY 66 Query: 111 LVME 114 LV++ Sbjct: 67 LVLK 70 >UniRef50_C5H7Q4 Anaerobic nucleoside diphosphate reductase n=3 Tax=unclassified Myoviridae RepID=C5H7Q4_9CAUD Length = 714 Score = 42.0 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 36/93 (38%), Gaps = 7/93 (7%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSS------DDVEMAINHIKSQLRATGERE 102 +++K N E + +K+ + + ++ + +E A I + Sbjct: 4 VQIIKKNGSLEEPDIKKVLAAVAKSANRVGYKELPPDVTQALESAFMRILVKSTKQNNLL 63 Query: 103 VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFE 135 + I ++V L +++ Y + S YR++ Sbjct: 64 ISVNDIHSIVEGALAEVNHEIYESY-STYRNYR 95 >UniRef50_A5I3C8 Putative uncharacterized protein n=10 Tax=Clostridium RepID=A5I3C8_CLOBH Length = 92 Score = 42.0 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 5/73 (6%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRP---VSSDDVEMAINHIKSQLRA--TGEREVPS 105 ++K + E F+E KL++ + + ++ D+ + IK+ ++ + S Sbjct: 3 IIKKSGKLEAFDESKLKTSIANSARDTKGVHLTESDLNSIVKDIKNIVKNIRKDNEKTSS 62 Query: 106 KMIGNLVMEQLKK 118 + ++ + LKK Sbjct: 63 YELIGIINDVLKK 75 >UniRef50_Q66LW9 Ribonucleoside-diphosphate reductase 1 alpha chain n=4 Tax=Siphoviridae RepID=Q66LW9_BPT5 Length = 811 Score = 42.0 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 20/98 (20%) Query: 50 RVVKSNDVREPFNEEKLR--------------SGMLRALEKR---PVSSDD--VEMAINH 90 +V+K + E F EKL S + A +K V D ++ I Sbjct: 42 KVIKRDGTVEDFAPEKLNGWAEYGCKTVDVSWSAITMAAQKTLPKGVVDSDTLMDALIKA 101 Query: 91 IKSQLRATGEREVPSKMIGNLVM-EQLKKLDKVAYIRF 127 +S ++ +VP+K + M ++L + +RF Sbjct: 102 AESLIKDNPAYDVPAKELRLAQMRKRLYDSFEPPSLRF 139 >UniRef50_D1SJR2 Putative uncharacterized protein n=1 Tax=Methanocaldococcus sp. FS406-22 RepID=D1SJR2_9EURY Length = 83 Score = 42.0 bits (98), Expect = 0.006, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 9/79 (11%) Query: 46 LVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPS 105 L + KS+ RE F+ E ++ + A E + + ++ E+ + Sbjct: 5 LAKVYITKSDGSREKFDFEIIKESLRNAGAD--------EELVEEVIKRIENRIHDEITT 56 Query: 106 KMIGNLVMEQLKKLD-KVA 123 + + ++ L++L+ VA Sbjct: 57 QELKMMITTVLRRLNRDVA 75 >UniRef50_Q2LUI4 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LUI4_SYNAS Length = 731 Score = 41.6 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 41/97 (42%), Gaps = 3/97 (3%) Query: 22 GSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSS 81 G+ R R+ + + + V S++ +N +++ ++R + + S Sbjct: 27 GNGNERERKGRLKKTELSGNRDTTDLTLFVRTSDEEVARWNRQRIVDALIR---ETDIDS 83 Query: 82 DDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 D E ++ Q+ A+G + + +I LV +L + Sbjct: 84 DTAEAVSREVEKQIMASGIGLLTTSLIRELVDAKLIE 120 >UniRef50_C8W489 Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W489_DESAS Length = 1197 Score = 41.6 bits (97), Expect = 0.007, Method: Composition-based stats. Identities = 13/99 (13%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVE-MAINHIKSQLRATGERE-VPSKM 107 + K + F+++K+ + RA + + ++A + Sbjct: 4 TIKKRDGREVSFDDKKITDAIFRAARSVGGEDRQLAMELTIEVLKMIKAKYNGNAFGVED 63 Query: 108 IGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIAR 146 + ++V + L + + R A Y + D + E Sbjct: 64 VQDIVEKVLI---ENGHARTAKAYILYRDRRTRMREAKG 99 >UniRef50_B3RGP7 Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Viruses RepID=B3RGP7_9CAUD Length = 707 Score = 41.6 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSD---DVEMAINHIKSQLRATGEREVPSK 106 +VVK + E +N K+ AL + + + + A+N + + T + + K Sbjct: 2 KVVKRDGREEFYNGIKVIKAAESALLESGHTEEEAYRIACAVNEVVANNLPTDQCTISVK 61 Query: 107 MIGNLVMEQLKKL 119 I LV + L + Sbjct: 62 NIHILVEDALMDM 74 >UniRef50_A8URA6 Ribonucleoside-diphosphate reductase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8URA6_9AQUI Length = 767 Score = 41.6 bits (97), Expect = 0.008, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 23/59 (38%), Gaps = 7/59 (11%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 VVK + RE + K+R + A + V ++ ++ + + ++ I Sbjct: 3 VVKRSGKREQLDINKIRIALEFAFKGLNVDPLEL-------ETDAQIQFRDGITTEEIQ 54 >UniRef50_Q1PZG5 Similar to oxygen sensitive ribonucleoside triphosphate reductase NrdD n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZG5_9BACT Length = 812 Score = 41.2 bits (96), Expect = 0.009, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 14/92 (15%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSS----DDVEMAINHIKSQLRATGEREVPS 105 VVK + PF E+K+ + +A + + +++ + ++ ++ + Sbjct: 7 YVVKRDGRTAPFVEKKIADAIFKAAQAVGGNDRALAEELAVVVSMFLAKKYNGNPPGI-- 64 Query: 106 KMIGNLVMEQLKKLDKV----AYIRFASVYRS 133 + I ++V + L + AYI +YR Sbjct: 65 ENIQDVVEKVLIETGHAKTAKAYI----IYRD 92 Score = 40.1 bits (93), Expect = 0.025, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKK 118 P+++ K+ + + + +S + E + ++ ++ ++G + + +I LV +L + Sbjct: 130 PWDKRKVAVALEKEAD---ISGEVAEEIASVVEQRVFSSGLNRISTSLIRELVDNELFE 185 >UniRef50_C1DWR9 Ribonucleoside-diphosphate reductase n=3 Tax=Hydrogenothermaceae RepID=C1DWR9_SULAA Length = 1222 Score = 41.2 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGN 110 VVK + E F +KL + LE + D + + +L +V ++ + Sbjct: 5 VVKRDGSVEKFQMKKLVDAIFALLEGLELPDDY--EIVFKVAKELDLKIPEKVTTEELDY 62 Query: 111 LVMEQLKKLDKVAYI 125 LV++ ++ L YI Sbjct: 63 LVLKAIEHLIPKNYI 77 >UniRef50_Q9ZLF9 Ribonucleoside-diphosphate reductase subunit alpha n=54 Tax=Epsilonproteobacteria RepID=RIR1_HELPJ Length = 788 Score = 41.2 bits (96), Expect = 0.011, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 8/63 (12%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEK-RPVSSDDVEMAINHIKSQLRATGEREVPSK 106 M VVK N EP + K++ A + VS ++E + ++L+ + + ++ Sbjct: 1 MITVVKRNGRIEPLDITKIQKYTKDATDNLEGVSQSELE-----VDARLQFRDK--ITTE 53 Query: 107 MIG 109 I Sbjct: 54 EIQ 56 >UniRef50_B7KJK7 Ribonucleoside-diphosphate reductase n=4 Tax=Cyanobacteria RepID=B7KJK7_CYAP7 Length = 1123 Score = 40.8 bits (95), Expect = 0.014, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 7/62 (11%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 +VVK + + N K+R + A + V+ +E + ++LR + ++ I Sbjct: 37 IQVVKRDGSKAALNIAKIREVVEWACVGKDVNPIALEA---GLTTRLRNG----ITTREI 89 Query: 109 GN 110 + Sbjct: 90 QD 91 >UniRef50_UPI0001AF06E2 ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Acinetobacter baumannii AB900 RepID=UPI0001AF06E2 Length = 790 Score = 40.4 bits (94), Expect = 0.016, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPV-SSDDVEMAINHIKSQLRATGERE 102 V K N EPF+ K+ + A++ V S + ++ AI I ++ + ++ Sbjct: 3 VTKRNGATEPFSPSKIEKAVNWAVDGTSVESQEVIDKAILLIYDGIKTSDIQQ 55 >UniRef50_D1CID8 Ribonucleoside-diphosphate reductase n=7 Tax=Bacteria RepID=D1CID8_THET1 Length = 819 Score = 40.4 bits (94), Expect = 0.017, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 3/71 (4%) Query: 39 TTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRAT 98 T E RVV P + +++R + A R + D + N + L Sbjct: 3 TAIRELETQRVRVVSPEGGLVPLDPDRVRRHLQHAC--RGLPECDPDELANEVVRSLYDR 60 Query: 99 GERE-VPSKMI 108 E + S MI Sbjct: 61 VTPEQIRSAMI 71 >UniRef50_A5TVY2 Ribonucleoside-diphosphate reductase n=15 Tax=Fusobacterium RepID=A5TVY2_FUSNP Length = 755 Score = 40.1 bits (93), Expect = 0.023, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 7/60 (11%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 +V+ +++ E N EK+R +LRA E V+ ++E I+ I E + ++ I Sbjct: 7 KVINRDNIVEDLNIEKIREKLLRACEGLEVNMVELESNIDSI-------YEENITTQKIQ 59 >UniRef50_C8PIL4 Putative uncharacterized protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PIL4_9PROT Length = 61 Score = 39.7 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 17/44 (38%), Gaps = 3/44 (6%) Query: 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA 44 M CP C T V+ +G R R+C C + T E Sbjct: 1 MFCPKCAHEKTAVL---KTIKGLKNIRMRRCEKCGYTWITEEKP 41 >UniRef50_A8P6Y3 Ribonucleoside-diphosphate reductase n=1 Tax=Brugia malayi RepID=A8P6Y3_BRUMA Length = 1061 Score = 39.7 bits (92), Expect = 0.027, Method: Composition-based stats. Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 4/62 (6%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIG 109 VVK + E + +K+ +++ +S D V+ I ++ A + V + + Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCY--GLSQDRVDHI--EISQKVIAGLYKGVTTVELD 67 Query: 110 NL 111 NL Sbjct: 68 NL 69 >UniRef50_B4E5V9 Ribonucleoside-diphosphate reductase n=71 Tax=cellular organisms RepID=B4E5V9_BURCJ Length = 1003 Score = 39.7 bits (92), Expect = 0.032, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 10/86 (11%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRAL--------EKRPVSSDDVEMAINHIKSQ 94 A +V++ N F K+ + +A + VE +++ Sbjct: 34 QATFADYKVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVREQVEQLTHNVVRA 93 Query: 95 LRAT--GEREVPSKMIGNLVMEQLKK 118 L + + I + V L + Sbjct: 94 LVRSRPNGGTFHIEDIQDQVELALMR 119 >UniRef50_C0QY27 Ribonucleoside-diphosphate reductase n=2 Tax=Brachyspira RepID=C0QY27_BRAHW Length = 773 Score = 39.7 bits (92), Expect = 0.033, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 51 VVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 ++K + EPFNEEKLR + A E + + + ++ + EV + Sbjct: 12 IIKRDGREEPFNEEKLRKVIDWATEGK---EAFTNQLLEGLNIKINDKMKIEVLYDEL 66 >UniRef50_A2PYM5 Ribonucleoside-diphosphate reductase n=4 Tax=Myoviridae RepID=A2PYM5_9CAUD Length = 742 Score = 39.3 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 7/62 (11%) Query: 49 PRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMI 108 V+ ++ R P++ + + A E V D + +L ++ ++ I Sbjct: 3 INVIHTDGSRTPYDANRAIEVINWACEGLEVDPDKLS-------RRLSRRFNADITTEEI 55 Query: 109 GN 110 N Sbjct: 56 QN 57 >UniRef50_A3CY54 Restriction endonuclease n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CY54_METMJ Length = 276 Score = 39.3 bits (91), Expect = 0.035, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 4/54 (7%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGER 101 M V K N R+PF+ + + R L V ++D E + I+ + + Sbjct: 1 MKHVTKVNGARQPFDRGR----VQRTLRNMGVGAEDAERIAHEIEESVPDGVKT 50 >UniRef50_B1ZWW1 ATP-cone domain protein n=2 Tax=Opitutaceae RepID=B1ZWW1_OPITP Length = 842 Score = 39.3 bits (91), Expect = 0.037, Method: Composition-based stats. Identities = 5/26 (19%), Positives = 12/26 (46%) Query: 50 RVVKSNDVREPFNEEKLRSGMLRALE 75 V+K + + F++ K+ + A Sbjct: 38 MVIKRDGSKVRFDQSKVTRALALAFH 63 >UniRef50_B2SYU1 Ribonucleoside-diphosphate reductase n=15 Tax=cellular organisms RepID=B2SYU1_BURPP Length = 1001 Score = 38.9 bits (90), Expect = 0.055, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 27/86 (31%), Gaps = 10/86 (11%) Query: 43 VAELVMPRVVKSNDVREPFNEEKLRSGMLRAL----EKRPVSSDDVEMAINHIKSQLRAT 98 A +V++ N F K+ + +A + +S V + + + Sbjct: 32 QATFADYKVIRRNGSVVSFEPSKIAIAVTKAFLAVNGGQGAASARVRELVEQLTQNVVRA 91 Query: 99 GEREVP------SKMIGNLVMEQLKK 118 R P + I + V L + Sbjct: 92 LVRSRPNGGTFHIEDIQDQVELALMR 117 >UniRef50_A8ZMX8 Putative uncharacterized protein n=5 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMX8_ACAM1 Length = 134 Score = 38.5 bits (89), Expect = 0.064, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Query: 1 MHCPFCFAVDT--KVIDSRLVGEGSSVRRRRQCLVCNERFT 39 M CP+C + + DS + +G+ V+R QC CN RF Sbjct: 1 MECPYCQSEKILKRGFDS--LQDGTLVQRY-QCKDCNRRFN 38 >UniRef50_Q8TGY9 2-phosphoglycerate kinase n=1 Tax=Methanopyrus kandleri RepID=PGK2_METKA Length = 327 Score = 38.5 bits (89), Expect = 0.065, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Query: 60 PFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKL 119 PF+ L + V IK +L+ G E+ + + +++ +L+++ Sbjct: 37 PFSRGVLARSLTA----IGVEPHKAYEIALKIKEELQDEGIEEISTDELADIIRTKLEEI 92 Query: 120 DK 121 D+ Sbjct: 93 DE 94 >UniRef50_O28725 Uncharacterized protein AF_1547 n=1 Tax=Archaeoglobus fulgidus RepID=Y1547_ARCFU Length = 47 Score = 38.1 bits (88), Expect = 0.091, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMA 87 M RV K + E F+ K+ LRA + ++ E Sbjct: 1 MLRVRKRDGRLEEFSRAKIVRTCLRAGASKKIAEKVAEEL 40 >UniRef50_A7I0I1 Anaerobic ribonucleoside-triphosphate reductase n=27 Tax=Bacteria RepID=A7I0I1_CAMHC Length = 893 Score = 38.1 bits (88), Expect = 0.093, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 48 MPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGER 101 M +++K + E F K++ + +A E D + I S++ E+ Sbjct: 1 MIKIIKRDGSLENFMPFKIQDAIKKAFESENYVFD--DKIYQAIISRIILDDEQ 52 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.314 0.173 0.617 Lambda K H 0.267 0.0531 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,362,878,260 Number of Sequences: 3077464 Number of extensions: 76030203 Number of successful extensions: 235748 Number of sequences better than 1.0e-01: 224 Number of HSP's better than 0.1 without gapping: 329 Number of HSP's successfully gapped in prelim test: 145 Number of HSP's that attempted gapping in prelim test: 235129 Number of HSP's gapped (non-prelim): 554 length of query: 149 length of database: 1,040,396,356 effective HSP length: 112 effective length of query: 37 effective length of database: 695,720,388 effective search space: 25741654356 effective search space used: 25741654356 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 88 (38.1 bits)