162 d1wmsa_ Probab=99.04   E-value=7.9e-10  Score=79.31  Aligned_columns=164  Identities=14%

Q ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             64976999855988888999999998620368529996144670389999855962899768875764268999999973
Q batch____       101 ARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL  180 (290)
Q Consensus       101 ~~~~~~l~l~g~PGaGKTTLL~~ll~~l~~~~~vaVI~~d~~t~~Da~~i~~~G~~v~~i~Tgg~c~~~a~~v~~al~~l  180 (290)
                      +..++.+.|+|.||+|||||++|++...-.................      .............     ..........
T Consensus         3 k~~~~KivivG~~~vGKTsLi~r~~~~~f~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~~~~~~~   71 (170)
T d1wmsa_           3 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTTIGVEFLNKDLEVDG------HFVTMQIWDTAGQ-----ERFRSLRTPF   71 (170)
T ss_dssp             CEEEEEEEEECCTTSSHHHHHHHHHHSCCCCCCSCEEEEEEEEETT------EEEEEEEEECCCC-----GGGHHHHGGG
T ss_pred             CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEC------CEEEEEEEEECCC-----CCCCCCCCCC
T ss_conf             5647999999798989999999998084776500001335776401------0001245420123-----3322110023


Q ss_pred             HHCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             34299699981876533301233424757999742224200676667634588899973121564100089999999984
Q batch____       181 PLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREV  260 (290)
Q Consensus       181 ~~~~~d~l~IE~vG~lv~pa~~~lg~~~~v~v~~v~eg~d~~~k~~~~~~~advivlNK~DL~~~~~~d~~~~~~~~~~~  260 (290)
                      ........++-.+-.......+...................|.          +++.||.|+.....  ..........-
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~d~~~~~~--~~~~~~~~~~~  139 (170)
T d1wmsa_          72 YRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPF----------VILGNKIDISERQV--STEEAQAWCRD  139 (170)
T ss_dssp             GTTCSEEEEEEETTCHHHHHTHHHHHHHHHHHHTCSCTTTSCE----------EEEEECTTCSSCSS--CHHHHHHHHHH
T ss_pred             CCCCCEEECCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCC----------EEECCHHHCCCCCC--CHHHHHHHHHH
T ss_conf             3221100002333322220010011011223220136767821----------11022011123455--53799999986


Q ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             899809998278888999999999998
Q batch____       261 NPEIEIILISATSGEGMDQWLNWLETQ  287 (290)
Q Consensus       261 np~~~V~~vSA~tGeG~~~l~~~l~~~  287 (290)
                      ....+.+++||+||+|++++++||-++
T Consensus       140 ~~~~~~~e~SAktg~gi~elf~~l~~~  166 (170)
T d1wmsa_         140 NGDYPYFETSAKDATNVAAAFEEAVRR  166 (170)
T ss_dssp             TTCCCEEECCTTTCTTHHHHHHHHHHH
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             189749996368988989999999999