450 c3k9gA_ Probab=96.39   E-value=0.077  Score=30.95  Aligned_columns=139  Identities=14%

Q ss_pred             CCEEEEEE-CCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHH-----------------------------
Q ss_conf             97699985-598888899999999862036852999614467038999985-----------------------------
Q batch____       103 KQLVLNLV-SSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRA-----------------------------  152 (290)
Q Consensus       103 ~~~~l~l~-g~PGaGKTTLL~~ll~~l~~~~~vaVI~~d~~t~~Da~~i~~-----------------------------  152 (290)
                      +...+.+. +..|+||||+--.+...+..+.++.+|.-|++...-......                             
T Consensus         1 ~~riI~v~s~kGGvGKTt~a~~lA~~La~g~~VlliD~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (226)
T c3k9gA_           1 KPKIITIASIKGGVGKSTSAIILATLLSKNNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIIN   80 (226)
T ss_dssp             CCEEEEECCSSSSSCHHHHHHHHHHHHTTTSCEEEEEECTTCHHHHHTHHHHHHTTCCTTTSSHHHHHTTSSCGGGGCEE
T ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHEEE
T ss_conf             98699998388788889999999999976998999998898870477436753323444335511210368978782133


Q ss_pred             --CCCEEEEECCC------CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHH
Q ss_conf             --59628997688------7576426899999997334299699981876533301233424757999742224200676
Q batch____       153 --TGTPAIQVNTG------KGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLK  224 (290)
Q Consensus       153 --~G~~v~~i~Tg------g~c~~~a~~v~~al~~l~~~~~d~l~IE~vG~lv~pa~~~lg~~~~v~v~~v~eg~d~~~k  224 (290)
                        .+..++....+      ..+......+...++.+... +|+++|++.+.+                         -.-
T Consensus        81 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~d~ViiD~~~~~-------------------------~~~  134 (226)
T c3k9gA_          81 VDNNLDLIPSYLTLHNFSEDKIEHKDFLLKTSLGTLYYK-YDYIVIDTNPSL-------------------------DVT  134 (226)
T ss_dssp             EETTEEEECCCGGGGGTTTCCCTTGGGHHHHHHHTTCTT-CSEEEEEECSSC-------------------------SHH
T ss_pred             CCCCCEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHC-CCEEEECCCCCC-------------------------CHH
T ss_conf             479968997588810012210120589999999998621-877996289888-------------------------999


Q ss_pred             HHHHHCCCC-EEEEECHHCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf             667634588-899973121564100089999999984899809998
Q batch____       225 YPHMFAAAS-LMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILI  269 (290)
Q Consensus       225 ~~~~~~~ad-vivlNK~DL~~~~~~d~~~~~~~~~~~np~~~V~~v  269 (290)
                      ....+..|| ++++...|......  +..+...++..++..++..+
T Consensus       135 ~~~~l~~ad~viiv~~~~~~~i~~--~~~~~~~l~~~~~~~~~~~i  178 (226)
T c3k9gA_         135 LKNALLCSDYVIIPMTAEKWAVES--LDLFNFFVRKLNLFLPIFLI  178 (226)
T ss_dssp             HHHHHTTCSEEEEEEESCTTHHHH--HHHHHHHHHTTTCCCCEEEE
T ss_pred             HHHHHHHCCEEEEEECCCHHHHHH--HHHHHHHHHHHCCCCCEEEE
T ss_conf             998774188699992498787999--99999999980887836999