33 c3k53B_ Probab=99.52   E-value=1.3e-13  Score=102.15  Aligned_columns=150  Identities=19%

Q ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHH--HHHHHHCCCEEEEECCCCCC----CCCHHHHHHHH
Q ss_conf             7699985598888899999999862036852999614467038--99998559628997688757----64268999999
Q batch____       104 QLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVND--AARIRATGTPAIQVNTGKGC----HLDAQMIADAA  177 (290)
Q Consensus       104 ~~~l~l~g~PGaGKTTLL~~ll~~l~~~~~vaVI~~d~~t~~D--a~~i~~~G~~v~~i~Tgg~c----~~~a~~v~~al  177 (290)
                      +..+.|+|.||+|||||+|+|++.     ++ .+++-++||+|  ...+...|.++..++|+|..    ..........+
T Consensus         3 ~~~I~ivG~~n~GKSTLin~L~~~-----~~-~v~~~~~tT~~~~~~~~~~~~~~~~l~DtpG~~~~~~~~~~~~~~~~~   76 (265)
T c3k53B_           3 LKTVALVGNPNVGKTTIFNALTGL-----RQ-HVGNWPGVTVEKKEGIMEYREKEFLVVDLPGIYSLTAHSIDELIARNF   76 (265)
T ss_dssp             CEEEEEEECTTSSHHHHHHHHHTT-----CE-EEEECTTSSCEEEEEEEEETTEEEEEEECCCCSCCCSSSHHHHHHHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHCC-----CC-EECCCCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf             765999869779998999998389-----83-242778740516899999899899999877733356124568899999


Q ss_pred             HHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECHHCCCCCCCCHHHHHHHH
Q ss_conf             97334299699981876533301233424757999742224200676667634588899973121564100089999999
Q batch____       178 PRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACA  257 (290)
Q Consensus       178 ~~l~~~~~d~l~IE~vG~lv~pa~~~lg~~~~v~v~~v~eg~d~~~k~~~~~~~advivlNK~DL~~~~~~d~~~~~~~~  257 (290)
                      ..+...+..+.+++..+                    .................+-++|+||+|+..  ..++.......
T Consensus        77 ~~~~~~~~~~~~~d~~~--------------------~~~~~~~~~~~~~~~~~~~i~v~nk~D~~~--~~~~~~~~~~~  134 (265)
T c3k53B_          77 ILDGNADVIVDIVDSTC--------------------LMRNLFLTLELFEMEVKNIILVLNKFDLLA--KIDIKKMRKEL  134 (265)
T ss_dssp             HHTTCCSEEEEEEEGGG--------------------HHHHHHHHHHHHHTTCCSEEEEEETCCCCC--CBCHHHHHHHH
T ss_pred             HHHHCCCCCEEEEECCC--------------------CCHHHHHHHHHHHCCCCCEEEEEECCCCCC--HHHHHHHHHHC
T ss_conf             97400012403530666--------------------441699999887507995899966644689--75399887443


Q ss_pred             HHHCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             98489980999827888899999999999
Q batch____       258 REVNPEIEIILISATSGEGMDQWLNWLET  286 (290)
Q Consensus       258 ~~~np~~~V~~vSA~tGeG~~~l~~~l~~  286 (290)
                           ..+++.+|+++++|+++|.+++..
T Consensus       135 -----~~~~i~~~~~~~~~~~el~~~i~~  158 (265)
T c3k53B_         135 -----GVPVIPTNAKKGEGVEELKRMIAL  158 (265)
T ss_dssp             -----TSCEEECBTTTTBTHHHHHHHHHH
T ss_pred             -----CCEEEEECCCCCCCHHHHHHHHHH
T ss_conf             -----986998011149998999999999