311 c2ja1A_ Probab=97.50   E-value=0.00043  Score=44.60  Aligned_columns=132  Identities=14%

Q ss_pred             HCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             64976999855988888999999998620368529996144670389999855962899768875764268999999973
Q batch____       101 ARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQVNTGKGCHLDAQMIADAAPRL  180 (290)
Q Consensus       101 ~~~~~~l~l~g~PGaGKTTLL~~ll~~l~~~~~vaVI~~d~~t~~Da~~i~~~G~~v~~i~Tgg~c~~~a~~v~~al~~l  180 (290)
                      ++|-+.| +.|+|||||||+|.+++..+...-+..++..+....+       .+...+....|-..-.........+...
T Consensus         8 ~~G~i~l-i~Gp~gSGKTt~L~~~l~~~~~~~~~v~~i~~~~~~r-------~~~~~i~~~~g~~~~~~~~~~~~~l~~~   79 (193)
T c2ja1A_           8 QNGWIEV-ICGSMFSGKSEELIRRVRRTQFAKQHAIVFKPCIDNR-------YSEEDVVSHNGLKVKAVPVSASKDIFEH   79 (193)
T ss_dssp             CCCEEEE-EEESTTSSHHHHHHHHHHHHHHTTCCEEEEEETTCCS-------SCSSEEECTTSCEEECEEESSGGGGGGG
T ss_pred             CCCEEEE-EECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCH-------HHCCCEEHHCCCCCCCCCCCCHHHHHHH
T ss_conf             7973999-9769789789999999997332797699972863001-------1014530220843477644807999999


Q ss_pred             HHCCCCEEEEECCCCCCCCHHH------HHHCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECH
Q ss_conf             3429969998187653330123------34247579997422242006766676345888999731
Q batch____       181 PLDDNGILFIENVGNLVCPASF------DLGEKHKVAVLSVTEGEDKPLKYPHMFAAASLMLLNKV  240 (290)
Q Consensus       181 ~~~~~d~l~IE~vG~lv~pa~~------~lg~~~~v~v~~v~eg~d~~~k~~~~~~~advivlNK~  240 (290)
                      -..++|+++|+-+=.+-.....      +.|-.+.+.-++.....+.....+.++..|+-+..-+.
T Consensus        80 l~~~~dvIiIDE~qfl~~~~~e~~~~l~~~g~~Vi~~gl~~~~~~~~f~~~~~L~~~ad~i~~l~~  145 (193)
T c2ja1A_          80 ITEELDVIAIDEVQFFDGDIVEVVQVLANRGYRVIVAGLDQDFRGLPFGQVPQLMAIAEHVTKLQA  145 (193)
T ss_dssp             CCSSCCEEEESSGGGSCTTHHHHHHHHHHTTCEEEEEEESBCTTSCBCSSHHHHHHHCSEEEECCC
T ss_pred             HHCCCCEEEECCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEE
T ss_conf             744998999868543898899999999977987999944541224602479999986421003123