11 c1mkyA_ Probab=99.83   E-value=4.9e-20  Score=141.07  Aligned_columns=183  Identities=17%

Q ss_pred             CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHH
Q ss_conf             65447664476105699999999999999998649769998559888889999999986203685299961446703899
Q batch____        69 APGMSQRRMLEVEIDVLDKNNRLAERNRARFAARKQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAA  148 (290)
Q Consensus        69 ~~~~~~~~~~~~~~~il~~n~~~a~~~r~~~~~~~~~~l~l~g~PGaGKTTLL~~ll~~l~~~~~vaVI~~d~~t~~Da~  148 (290)
                      .++....-+.++...+..............-.....+.++++|.||+|||||+|+|+++     ...++...+.++..  
T Consensus       130 ISA~~g~g~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~iaiiG~~n~GKSSLin~l~~~-----~~~~vs~~~~~~~~--  202 (407)
T c1mkyA_         130 VSAEHNINLDTXLETIIKKLEEKGLDLESKPEITDAIKVAIVGRPNVGKSTLFNAILNK-----ERALVSPIPVDDEV--  202 (407)
T ss_dssp             CBTTTTBSHHHHHHHHHHHHHHTTCCSSSCCCCCSCEEEEEECSTTSSHHHHHHHHHTS-----TTEEECCCCCCEEE--
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC-----CEEEEECCCCCCCC--
T ss_conf             86245762332100111111111111221223443210002376666526588874088-----42686204432201--


Q ss_pred             HHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCHH----HH
Q ss_conf             99855962899768875764268999999973342996999818765333012334247579997422242006----76
Q batch____       149 RIRATGTPAIQVNTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEGEDKP----LK  224 (290)
Q Consensus       149 ~i~~~G~~v~~i~Tgg~c~~~a~~v~~al~~l~~~~~d~l~IE~vG~lv~pa~~~lg~~~~v~v~~v~eg~d~~----~k  224 (290)
                        ...|.++..+||+|...........+++.                          ++..+.|+|+.++...+    ..
T Consensus       203 --~~~~~~~~l~Dt~G~~~~~~~~~~~~~~~--------------------------adv~i~v~D~~~~~~~~d~~~~~  254 (407)
T c1mkyA_         203 --FIDGRKYVFVDTAGLEKYSNYRVVDSIEK--------------------------ADVVVIVLDATQGITRQDQRXAG  254 (407)
T ss_dssp             --EETTEEEEESSCSCCCCSCCHHHHHHHHH--------------------------CSEEEEEEETTTCCCHHHHHHHH
T ss_pred             --CCCCEEEEEECCCCHHHHHHHHHHHHHCC--------------------------CCEEEEEEECCCCCCHHHHHHHH
T ss_conf             --12985899832898888899999986242--------------------------88899999679888998999999


Q ss_pred             HHHHHCCCCEEEEECHHCCCCCCCCHHHHHHHHHHHC---CCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             6676345888999731215641000899999999848---9980999827888899999999999
Q batch____       225 YPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVN---PEIEIILISATSGEGMDQWLNWLET  286 (290)
Q Consensus       225 ~~~~~~~advivlNK~DL~~~~~~d~~~~~~~~~~~n---p~~~V~~vSA~tGeG~~~l~~~l~~  286 (290)
                      +......+-++|+|||||++..+...+.+.+.+++..   +.+||+++||++|+|++++++++.+
T Consensus       255 ~~~~~~~p~iiv~NK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~vSAk~g~gv~~l~~~~~~  319 (407)
T c1mkyA_         255 LXERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRXIDAXNL  319 (407)
T ss_dssp             HHHHTTCEEEEEEECGGGSTTGGGCHHHHHHHHHHHCGGGTTSCEEECBTTTTBSHHHHHHHHHH
T ss_pred             HHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf             99975995999999520766621449999999998841069984999857798998898999999