Phyre 2 alignment of P0AC59 with c3kp9A_

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Job Description | P0AC59
Confidence | 27.26% | Date | Thu Jan 5 11:17:15 GMT 2012
Rank | 268 | Aligned Residues | 58
% Identity | 16% | Template | c3kp9A_
PDB info | PDB header:blood coagulation,oxidoreductase | Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; | PDBTitle: structure of a bacterial homolog of vitamin k epoxide reductase
Resolution | 3.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . |  |  | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . |  |  | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | L | Y | I | Y | D | H | C | P | Y | C | L | K | A | R | M | I | F | . | . | G | L | K | N | I | P | V | E | L | H | V | L | L | N | D | . | . | D | A | E | T | P | T | R | M | V | G | Q | K | Q | V | P | I | L | Q | K | D | D | S | R | Y | M | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template Sequence |  | T | M | Y | G | A | Y | W | C | P | H | C | Q | D | Q | K | E | L | F | G | A | A | F | D | Q | V | P | Y | V | E | C | S | P | N | G | P | G | T | P | Q | A | Q | E | C | T | E | A | G | I | T | S | Y | P | T | W | I | I | . | N | G | R | T | Y | T
Template Known Secondary structure |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | G | G | G | G | G | G | S |  |  |  |  | S |  | S | S |  | S | S | S |  |  |  |  |  |  |  | T | T | T |  |  | S | T | T |  |  |  |  | . | T | T |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 202 | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . |  | . | . | 260 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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