14/01/2012 15:05:10 : INFO  : Run start: Sat Jan 14 15:05:09 GMT 2012
14/01/2012 15:05:14 : INFO  : Initialised job
14/01/2012 15:05:16 : INFO  : Renaming log file 'phyre2_20120114_150509.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/8c75eecac286ce86/phyre_20120114_150509.log'
14/01/2012 15:05:17 : INFO  : Initialised job:
Sequence
>batch____
MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMP
ESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLLPRFAKSAFDEFSTPAARK
YFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVKPNAVNGELSEDDIQLFPLLR
NLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI

14/01/2012 15:05:18 : INFO  : Checked sequence
14/01/2012 15:05:20 : INFO  : Finding homologues with PSI-BLAST
14/01/2012 15:05:21 : INFO  : PSI-BLAST 3 iterations
14/01/2012 15:06:46 : INFO  : PSI-BLAST 5 iterations
14/01/2012 15:08:37 : INFO  : Finished PSI-BLAST
14/01/2012 15:08:39 : INFO  : Running Buildali to generate a3m file
14/01/2012 15:15:42 : INFO  : Converting to HMM
14/01/2012 15:15:44 : INFO  : Calibrating HMM
14/01/2012 15:15:54 : INFO  : Searching HMM database
14/01/2012 15:20:42 : INFO  : Finished buildali
14/01/2012 15:20:44 : INFO  : Predicting secondary structure
14/01/2012 15:20:49 : INFO  : Predicted secondary structure (PSI-Pred)
14/01/2012 15:20:50 : INFO  : Predicting Disordered regions
14/01/2012 15:20:53 : INFO  : Predicted Disorder (Disopred)
14/01/2012 15:20:54 : INFO  : Running memsat_svm check
14/01/2012 15:23:30 : INFO  : Globular protein
14/01/2012 15:23:31 : INFO  : Predicted Transmembrane (memsat_svm) ID '8c75eecac286ce86'
14/01/2012 15:23:32 : INFO  : Initialising fold library search
14/01/2012 15:23:34 : INFO  : Initialised search input
14/01/2012 15:23:35 : INFO  : Building Ensemble models
14/01/2012 15:23:37 : INFO  : Building hh.c1g7oA_.model.1.pdb
14/01/2012 15:23:48 : INFO  : Building c1g7oA_.1.pdb
14/01/2012 15:23:58 : INFO  : Building c3c8eB_.2.pdb
14/01/2012 15:24:07 : INFO  : Building c1ljrB_.3.pdb
14/01/2012 15:24:17 : INFO  : Building c3m0fA_.4.pdb
14/01/2012 15:24:26 : INFO  : Building c3lykA_.5.pdb
14/01/2012 15:24:36 : INFO  : Building c1oyjC_.6.pdb
14/01/2012 15:24:45 : INFO  : Building c2hnlB_.7.pdb
14/01/2012 15:24:55 : INFO  : Building c3m3mA_.8.pdb
14/01/2012 15:25:04 : INFO  : Building c3ergA_.9.pdb
14/01/2012 15:25:14 : INFO  : Building c3ic8D_.10.pdb
14/01/2012 15:25:23 : INFO  : Building c3nivD_.11.pdb
14/01/2012 15:25:32 : INFO  : Building c1yq1A_.12.pdb
14/01/2012 15:25:41 : INFO  : Building c3lxzD_.13.pdb
14/01/2012 15:25:51 : INFO  : Building c2jl4A_.14.pdb
14/01/2012 15:26:01 : INFO  : Building c1gwcC_.15.pdb
14/01/2012 15:26:11 : INFO  : Building c1eemA_.16.pdb
14/01/2012 15:26:22 : INFO  : Building c2pmtA_.17.pdb
14/01/2012 15:26:31 : INFO  : Building c1zl9A_.18.pdb
14/01/2012 15:26:41 : INFO  : Building c3bbyA_.19.pdb
14/01/2012 15:26:49 : INFO  : Building c3uarA_.20.pdb
14/01/2012 15:27:10 : INFO  : Finished HH model building
14/01/2012 15:27:11 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
14/01/2012 15:27:51 : INFO  : html domain output complete ID '8c75eecac286ce86'
14/01/2012 16:02:16 : INFO  : Run end  : Sat Jan 14 16:02:15 GMT 2012
