BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (732 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriacea... 1499 0.0 UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=G... 757 0.0 UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organis... 756 0.0 UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacter... 734 0.0 UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteri... 709 0.0 UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacter... 690 0.0 UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-... 669 0.0 UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromo... 662 0.0 UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacter... 648 0.0 UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=... 646 0.0 UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrer... 645 0.0 UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter tur... 642 0.0 UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacter... 641 0.0 UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella gryl... 626 e-178 UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus caps... 615 e-174 UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Th... 609 e-172 UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanel... 603 e-171 UniRef50_Q21H75 Transcription elongation factor GreA / replicati... 602 e-170 UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs repli... 597 e-169 UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aero... 590 e-167 UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Ma... 587 e-166 UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 ... 587 e-166 UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=G... 587 e-166 UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylop... 586 e-165 UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ... 584 e-165 UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs repli... 584 e-165 UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus n... 583 e-165 UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine ... 580 e-164 UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gamma... 579 e-163 UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae R... 578 e-163 UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbea... 571 e-161 UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassi... 569 e-160 UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea... 567 e-160 UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Ps... 565 e-159 UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii ... 562 e-158 UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria... 561 e-158 UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=ce... 560 e-158 UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4... 557 e-157 UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis... 553 e-156 UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus ... 550 e-155 UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobi... 527 e-148 UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (... 514 e-144 UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6... 503 e-140 UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacteri... 498 e-139 UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria... 498 e-139 UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio s... 494 e-138 UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication fac... 491 e-137 UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteri... 475 e-132 UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae... 472 e-131 UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter... 471 e-131 UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED... 468 e-130 UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Su... 468 e-130 UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID... 467 e-130 UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferrug... 466 e-129 UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales R... 465 e-129 UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Ma... 464 e-129 UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisph... 462 e-128 UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadale... 454 e-126 UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae R... 448 e-124 UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacter... 446 e-123 UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia mucini... 446 e-123 UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum a... 442 e-122 UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514... 439 e-121 UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix or... 438 e-121 UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia Re... 437 e-121 UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucom... 437 e-121 UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-sup... 436 e-120 UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oe... 434 e-120 UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleo... 431 e-119 UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=S... 430 e-119 UniRef50_C3XBI2 Primosomal protein N' directs replication fork a... 427 e-118 UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID... 423 e-116 UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae ... 421 e-116 UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadens... 421 e-116 UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-sup... 419 e-115 UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44... 417 e-115 UniRef50_P57220 Primosomal protein N' n=4 Tax=Buchnera aphidicol... 417 e-114 UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosi... 416 e-114 UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Ca... 414 e-114 UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatu... 414 e-114 UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius the... 414 e-114 UniRef50_UPI00016C01EC Primosomal protein N (replication factor ... 411 e-113 UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2... 411 e-113 UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium Re... 411 e-113 UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=L... 411 e-113 UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID... 411 e-113 UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas auran... 410 e-113 UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Po... 407 e-112 UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obsc... 406 e-111 UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=... 405 e-111 UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candida... 404 e-111 UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marin... 403 e-110 UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organism... 403 e-110 UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB... 402 e-110 UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacter... 402 e-110 UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria Rep... 402 e-110 UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacte... 402 e-110 UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulfo... 400 e-110 UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus Re... 400 e-110 UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacte... 398 e-109 UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachl... 397 e-109 UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamo... 396 e-108 UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistip... 394 e-108 UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum therm... 394 e-108 UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii... 394 e-108 UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=... 393 e-107 UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepI... 391 e-107 UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N5... 390 e-107 UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepI... 390 e-106 UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae Rep... 390 e-106 UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonel... 390 e-106 UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=B... 389 e-106 UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4... 389 e-106 UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID... 389 e-106 UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales Re... 388 e-106 UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Ac... 388 e-106 UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale... 388 e-106 UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum ... 386 e-105 UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacter... 386 e-105 UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C... 385 e-105 UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-supe... 385 e-105 UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna Re... 384 e-105 UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Sy... 384 e-105 UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rub... 383 e-104 UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerof... 382 e-104 UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RI... 382 e-104 UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fu... 382 e-104 UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbioba... 382 e-104 UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobac... 381 e-104 UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales... 380 e-103 UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=C... 380 e-103 UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachysp... 380 e-103 UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacte... 380 e-103 UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulos... 380 e-103 UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacter... 379 e-103 UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton tha... 379 e-103 UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacteriu... 379 e-103 UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID... 378 e-103 UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidat... 378 e-103 UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber... 377 e-102 UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio al... 376 e-102 UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminoc... 376 e-102 UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae Re... 376 e-102 UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepI... 375 e-102 UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=... 375 e-102 UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium... 375 e-102 UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae Rep... 375 e-102 UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae ... 374 e-102 UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparin... 373 e-101 UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus h... 372 e-101 UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferr... 372 e-101 UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkal... 371 e-101 UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termiti... 370 e-101 UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepI... 370 e-101 UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 T... 370 e-101 UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacter... 370 e-100 UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochrace... 370 e-100 UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL... 370 e-100 UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae ... 369 e-100 UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepI... 368 e-100 UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candida... 367 e-100 UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepI... 367 e-100 UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdema... 367 e-99 UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacr... 367 1e-99 UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Ba... 367 1e-99 UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae ... 366 2e-99 UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostri... 366 2e-99 UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=... 365 2e-99 UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium cap... 365 4e-99 UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphen... 365 5e-99 UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotro... 364 7e-99 UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacteri... 363 9e-99 UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes Rep... 363 9e-99 UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacter... 363 1e-98 UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacter... 363 1e-98 UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Mo... 363 2e-98 UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinen... 363 2e-98 UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID... 362 2e-98 UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collins... 362 3e-98 UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae Re... 362 3e-98 UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminoco... 360 9e-98 UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM... 360 1e-97 UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=... 360 1e-97 UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacif... 359 2e-97 UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID... 358 6e-97 UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus a... 357 7e-97 UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum varia... 357 7e-97 UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Poss... 357 1e-96 UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodf... 357 1e-96 UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium cu... 356 2e-96 UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite... 356 2e-96 UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bactero... 356 2e-96 UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugam... 356 2e-96 UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribac... 355 3e-96 UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa... 355 3e-96 UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flu... 355 3e-96 UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=... 352 4e-95 UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Ph... 351 6e-95 UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimo... 350 1e-94 UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=... 350 1e-94 UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis ... 349 3e-94 UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bact... 348 3e-94 UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacter... 348 5e-94 UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysan... 348 5e-94 UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia ... 348 5e-94 UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 348 6e-94 UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteri... 348 6e-94 UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagib... 348 6e-94 UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n... 347 1e-93 UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales... 345 5e-93 UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides Re... 343 1e-92 UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacte... 342 5e-92 UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae R... 341 6e-92 UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincenti... 338 4e-91 UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus mo... 338 6e-91 UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio sale... 337 8e-91 UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7... 337 1e-90 UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PR... 337 1e-90 UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=De... 335 3e-90 UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobact... 335 3e-90 UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=1... 335 4e-90 UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacteriu... 335 5e-90 UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes Rep... 332 3e-89 UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independen... 331 7e-89 UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhu... 330 1e-88 UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aura... 328 5e-88 UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechoc... 327 1e-87 UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonp... 324 7e-87 UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter ther... 322 2e-86 UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succin... 321 6e-86 UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae Re... 321 6e-86 UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gin... 321 7e-86 UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2... 318 5e-85 UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium ro... 317 1e-84 UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium p... 316 2e-84 UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, ... 316 2e-84 UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepI... 315 3e-84 UniRef50_D0RQY4 Primosomal protein N' n=1 Tax=alpha proteobacter... 315 4e-84 UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magn... 313 1e-83 UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-sup... 311 7e-83 UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexiba... 310 1e-82 UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospiril... 304 1e-80 UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium n... 303 2e-80 UniRef50_Q2NIR1 Primosomal protein N' n=3 Tax=Candidatus Phytopl... 301 5e-80 UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospir... 300 2e-79 UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acet... 298 6e-79 UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum fer... 296 3e-78 UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID... 290 1e-76 UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B... 283 1e-74 UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID... 281 9e-74 >UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriaceae RepID=PRIA_ECOLI Length = 732 Score = 1499 bits (3882), Expect = 0.0, Method: Compositional matrix adjust. Identities = 732/732 (100%), Positives = 732/732 (100%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL Sbjct: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA Sbjct: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET Sbjct: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN Sbjct: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV Sbjct: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA Sbjct: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ Sbjct: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG Sbjct: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ Sbjct: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH Sbjct: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI Sbjct: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK Sbjct: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 Query: 721 VKWVLDVDPIEG 732 VKWVLDVDPIEG Sbjct: 721 VKWVLDVDPIEG 732 >UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=Gammaproteobacteria RepID=A1SYK9_PSYIN Length = 753 Score = 757 bits (1955), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/738 (49%), Positives = 504/738 (68%), Gaps = 11/738 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK-----AGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + +AL +PL + FDYLLP+ + GCRVRVPFG +++ IG++ V+ + + Sbjct: 16 ICRIALAIPLHKQFDYLLPDYLLKTEPNNLVGCRVRVPFGGKRQLIGVICEVNPKCDYAI 75 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++LK + +++D P+ ++W LL WAA YY + GDV ALP LRQG+ A + Sbjct: 76 DKLKKITQLIDQTPLLDKNIWSLLRWAAFYYQYAFGDVFQQALPSSLRQGKEAIFKGYEH 135 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T +LN KR+ KQQ AL L + + Q++ + L+AL++KG+ + Sbjct: 136 WQLT--ANPFNLNDFKRAQKQQSALQILSESSLSNQQLSAQGISRPTLKALQEKGVIESV 193 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 + P + +W + S ++ L EQA A+ ++ + F+ +LL G+TGSGKTEVYL+ Sbjct: 194 DKQPVSNLNWLAQFEESAQKPALTVEQAIAISCVNQQLEAFNCFLLEGITGSGKTEVYLN 253 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +++ VL GKQALV+VPEIGLTPQTI RF+ RFN PV + HSGLN E+L WL AK G Sbjct: 254 IIKPVLLAGKQALVIVPEIGLTPQTIKRFQARFNVPVYLKHSGLNPREQLDTWLHAKQGS 313 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AI+IGTRS++F FKNLG+I++DEEHD+S+KQQ+G+RYHARD A+ RA ++IPIILGS Sbjct: 314 GAIIIGTRSSIFCDFKNLGLIILDEEHDASFKQQDGFRYHARDFAIKRAALQKIPIILGS 373 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LETL N Q KY+ L LT R GNA+P +++L G +++GL+P LI M++HL Sbjct: 374 ATPSLETLNNALQGKYQHLHLTERPGNAKPPTNSLINLAGLPLKSGLSPQLIELMKKHLD 433 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 +NQVILFLNRRG+AP L+CH+CGW+ +C RCD +YT H++ ++L CHHC S PVP QC Sbjct: 434 KNNQVILFLNRRGYAPVLMCHECGWLVKCGRCDAFYTYHKSANYLHCHHCASTLPVPHQC 493 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 CGST L G+GTEQLE+TL LFP P RIDRD T +K + Q L +++ G +IL Sbjct: 494 DDCGSTQLNSTGVGTEQLEETLNDLFPDHPTVRIDRDNTRKKESFNQYLTDINSGKYKIL 553 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLVAL+DVDGALF D+R++ER AQL+TQV+GRAGRA K+G+VVL Sbjct: 554 LGTQMLAKGHHFPDVTLVALIDVDGALFCNDYRASERLAQLFTQVSGRAGRAEKKGQVVL 613 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL--- 653 QTHHPEH LLQ L+ GY F+ AL ER++ QLPP T ++RAE N A FL Sbjct: 614 QTHHPEHSLLQDLINNGYFEFSRNALQERKLAQLPPSTFQALLRAESDNATLAENFLSLC 673 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 QQ+ I + + +KL +LGP+PA +R G++R+Q+LLQ R + I++ L + Sbjct: 674 QQILQQICINNNSLDKLLILGPIPASMERRAGKYRFQLLLQSEQRAVITQILHRALHAFD 733 Query: 714 TIPDSRKVKWVLDVDPIE 731 +P+ RKV+W +DVDPI+ Sbjct: 734 NLPEGRKVRWSIDVDPID 751 >UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organisms RepID=PRIA_HAEIN Length = 730 Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/737 (52%), Positives = 505/737 (68%), Gaps = 19/737 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLPR FDY +P+ ++++ G RV VPFG Q+ R+ IV S++P ++L Sbjct: 1 MKIVRVALAVPLPRLFDYFVPDDVSLQIGMRVLVPFGTQK-RVAIVADFPTKSDVPEDKL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+++ LD P+FT W L WAA+YY +GDVLF ALP+ LR G A +W Sbjct: 60 KAILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALPVKLRNGESAVKNDRTFWRI 119 Query: 121 TEQGQ-AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T+ G+ A+ LKRS KQ +AL L + + + +F+ A AL+ KG + + Sbjct: 120 TDAGKNALKQGELKRSKKQAEALQYLSETDLEK---GNNDFSSAIWSALKAKGFIEEITI 176 Query: 180 TPEFSDWR----TNYAVSGE-RLRLNTEQATAVGAI--HSAADTFSAWLLAGVTGSGKTE 232 W+ N V+ E RL LN +QA A + HS F+ WLL GVTGSGKTE Sbjct: 177 QTNPLSWQQRLGNNPIVNAENRLTLNKQQALAFSQLLFHSG---FNVWLLDGVTGSGKTE 233 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 +YL +E +L GKQ LV+VPEIGLTPQT+ RF+ RFN ++VLHS L D++RL W +A Sbjct: 234 IYLQYIEEILKSGKQVLVLVPEIGLTPQTVQRFKVRFNVEIDVLHSNLTDTQRLYVWDRA 293 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 ++G++AIVIGTRSALFT F NLG I++DEEHDSSYKQQ+ WRYHARDLA+ A I + Sbjct: 294 RSGQSAIVIGTRSALFTQFSNLGAIILDEEHDSSYKQQDSWRYHARDLAIVLAQKLNISV 353 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMR 412 ++GSATP+LE++ NVQ KY+ L L++RAGN+ V+DLK Q +Q GL+ L+ RM+ Sbjct: 354 LMGSATPSLESINNVQNGKYQHLVLSKRAGNSTALRHFVIDLKNQNIQNGLSKPLLERMK 413 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 HL+ NQV+LFLNRRGFAP LLCH+CGWIA+CP C+ YT HQ Q+ LRCHHC +Q+ + Sbjct: 414 AHLEKGNQVLLFLNRRGFAPVLLCHECGWIAQCPHCEKPYTYHQHQNVLRCHHCGAQKTI 473 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 PRQC CGSTHLV GLGTEQLE+TL LFP ++RIDRD+TSRKG LE L ++ +G Sbjct: 474 PRQCGDCGSTHLVTTGLGTEQLEETLKTLFPHYSVARIDRDSTSRKGKLEGYLEDIQQGK 533 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 ++ILIGTQMLAKGHHFP+VTLVAL++VD ALFS DFR+ ER AQLY QVAGRAGRA KQG Sbjct: 534 SQILIGTQMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQG 593 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 EVVLQTH+P+HPLL TLL GY AFA++ L R M LPP+T +++A+ ++ A Sbjct: 594 EVVLQTHYPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALIKAQARHSDLAENC 653 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 L Q+ + S + L +LGP+PA K+ G++RWQ+LLQHPSR+ LQ + Sbjct: 654 LSQIADFFQSKQITG--LQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTLQKALREYQQA- 710 Query: 713 NTIPDSRKVKWVLDVDP 729 + + +V+ +LDVDP Sbjct: 711 -ELEKNSQVRLILDVDP 726 >UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacteria RepID=A8FQM3_SHESH Length = 742 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/733 (49%), Positives = 504/733 (68%), Gaps = 10/733 (1%) Query: 1 MPV-AHVALPVPLPRTFDYLLPEGMTV--KAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP+ VALPVP+ + F Y +P+ ++ K G RV+VPFG+QQ IG+V +SD L Sbjct: 12 MPLFVEVALPVPMRQAFSYKVPDSISTLPKKGMRVKVPFGRQQ-LIGLVTGISDTCNLAP 70 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K++ E+LD EP+ S+++L WAA YY +G +L A+P+ LR+G ++ + Sbjct: 71 QQIKSIFELLDDEPLLPDSLYKLTAWAARYYFCSLGQMLSQAIPVALRKGAEISSNTTTF 130 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T+ G++ L++LKR+P Q++ + L +G++ +D++++L + +AL+AL ++ Sbjct: 131 WHLTQSGRSASLDTLKRAPAQKKVMEHLLKGELTQDEISSLALSKSALKALNERAWITQD 190 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 WR + + L LN EQA AV ++ + LL G+TGSGKTEVYL+ Sbjct: 191 ERVNSIDLSWREKLELDEDPLTLNPEQAIAVATLNQQTG-YHCTLLEGITGSGKTEVYLA 249 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +LE+VL++GKQAL++VPEIGLTPQTI+RF+ RF V V+HSGL D++RL+AW +AK GE Sbjct: 250 LLESVLSKGKQALILVPEIGLTPQTISRFKSRFKVQVAVIHSGLTDNQRLAAWQQAKTGE 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AAI+IGTRSALFTP GVI++DEEHDSS+KQQEG YHARDLAV R H E+IP++LG+ Sbjct: 310 AAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGT 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N +Y+ L L +RAGNA Q ++D+ Q + GL+ AL+ MR HL Sbjct: 370 ATPSLESLQNALSGRYKHLELGQRAGNAEKVRQGIIDISNQPLNTGLSHALLNEMRIHLD 429 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQV+LFLNRRGFAPALLCH+CG + EC RCD ++T+HQ+ +RCHHC + +P+QC Sbjct: 430 AGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNHYAIPKQC 489 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 +CGST L+ G+GTEQL L FP P+ RIDRDTTSRKGALE L +H+G +IL Sbjct: 490 HNCGSTMLMGQGVGTEQLANILEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKIL 549 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQV+GRAGRA K G V++ Sbjct: 550 VGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLM 609 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH ++P+L+ L++KGY FA L ER+ LPP +++RAE H A FL Q+ Sbjct: 610 QTHQADNPVLRELMHKGYGEFARGQLNERKQALLPPAWHMLLIRAEAHQALDADNFLSQV 669 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 L+ +E+ V+GP+PA K+ G++R ++ Q SR +LQH L I ++P Sbjct: 670 AELLPQ----NEESEVIGPMPAPMDKKAGKYRRHLIFQTKSRNQLQHAFEHALPQIESLP 725 Query: 717 DSRKVKWVLDVDP 729 +++ +W LD DP Sbjct: 726 LAKRCRWSLDRDP 738 >UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteria RepID=A4VH03_PSEU5 Length = 798 Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/736 (50%), Positives = 489/736 (66%), Gaps = 9/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDYL P G T ++ G R+RVPFG++ E IG++V +SD SE+PL + Sbjct: 63 ILRLALPSPLRRLFDYLPPHGATAGSLQPGMRLRVPFGRR-EVIGVLVELSDQSEVPLEK 121 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ +E+LDS P S+++L LW A YY H +GD L ALP+LLRQG PA YW Sbjct: 122 LRPAIELLDSTPPLPPSLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARLERYWR 181 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLA 177 E G D L R+P+Q++ L + Q + + L+ N +L L +KGL + Sbjct: 182 LAE-GANPDDPRLARAPRQRETLKIIAQHAHGLPHALLGKLQLNKDSLDLLLEKGLVRVE 240 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S + + L LN +Q A AI + F A+LLAGVTGSGKTEVYL + Sbjct: 241 SRRSSPPRQHSGSWLLQAELTLNAQQRAAFEAISAGLGGFQAFLLAGVTGSGKTEVYLQL 300 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VLA GKQALV++PEI L PQT+ARF +RFNA + +LHS +ND ERL AWL A++GEA Sbjct: 301 IHRVLAAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNINDRERLDAWLAARDGEA 360 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 I+IGTRSALFTP KN G+I+IDEEHD+SYKQQEG RYHARDLA+ RA E +PI+LGSA Sbjct: 361 DIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLGSA 420 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L N +Y LL+L++RAGNA+ LD+K + + AG++ L + Q L A Sbjct: 421 TPSLESLHNAHSGRYALLKLSQRAGNAQQPRFLRLDVKSRPLDAGISGPLQQAIGQTLAA 480 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+++LNRRGFAP LLCHDCGW+++C RCD TLHQ + LRCHHC PR CP Sbjct: 481 GQQVLVYLNRRGFAPTLLCHDCGWLSQCQRCDARMTLHQRHNELRCHHCGHVERPPRNCP 540 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG L PVG GTE+ E+ L LFP P+ RIDRD+T+RKGA+E+ ++RG +L+ Sbjct: 541 DCGKVDLRPVGAGTERAEERLGVLFPDYPVLRIDRDSTARKGAMEKMFTTINRGDPCLLV 600 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQL QVAGRAGRA + G+V++Q Sbjct: 601 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 660 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH +HPLL L +GY AFAEQAL+ERR LPP++ ++RAE A FL + Sbjct: 661 THLADHPLLVQLTDQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDEAC 720 Query: 658 NLILSS--PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 L + L + +LGPVPA +R GR+R Q+LLQ +R L +++ + L+ + Sbjct: 721 TLAEQTFGQLQLSGIELLGPVPAPMERRAGRYRAQLLLQGNARAALHRLMDAWVPLLEQL 780 Query: 716 PDSRKVKWVLDVDPIE 731 P R V+W LDVDPI+ Sbjct: 781 PGGRAVRWSLDVDPID 796 >UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacteria RepID=A6VDH1_PSEA7 Length = 739 Score = 690 bits (1780), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/740 (50%), Positives = 482/740 (65%), Gaps = 18/740 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDY P G+ ++ G R+ VPFG++ E IG+++ V+D SE+P ++ Sbjct: 5 ILRLALPSPLRRLFDYRAPRGIPRSALQPGIRLLVPFGRR-EMIGVLIEVTDRSEVPEDK 63 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK + VLD++P + L W A YY H +GD L ALP LLRQG PA +W Sbjct: 64 LKPALRVLDAKPPMPAHLLELCRWTAQYYQHSLGDSLSWALPNLLRQGEPAEARQQRFWH 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLA 177 A EQ ++D L R+P+Q+QALA L+Q + + + LE N +L L++KGL +L Sbjct: 124 AVEQS-SLDDPRLARAPRQRQALAILKQHPHGVSHELLNQLEINKDSLDLLKEKGLVELE 182 Query: 178 ----SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + P W ++ L LN EQ A A+ ++ +F +LLAGVTGSGKTEV Sbjct: 183 VRRHNTPPREGGW-----LAQAELPLNPEQRAAFEAVRASHGSFHCFLLAGVTGSGKTEV 237 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL ++ LA G+QALV++PEI L PQT+ARF RFNA + +LHS L D ERL AWL A+ Sbjct: 238 YLQLIRETLAAGRQALVLIPEINLGPQTLARFERRFNARIALLHSALTDRERLDAWLAAR 297 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 +GEA IVIGTRSALFTP K G+I++DEEHD+SYKQQ+G RYHARDLA+ RA E +PI+ Sbjct: 298 DGEADIVIGTRSALFTPLKRPGLIIVDEEHDASYKQQDGLRYHARDLALVRARLENVPIL 357 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQ 413 LGSATPALE+L N Q +Y LLRLT+RAG A+P LD+K + AGL+ L + Sbjct: 358 LGSATPALESLHNAQAGRYGLLRLTQRAGGAQPPKFIRLDVKSMPLDAGLSRPLQQAIGD 417 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L A QV++FLNRRGFAP LLCHDCGWI++CPRCD T+HQ LRCHHCD ++ P Sbjct: 418 TLAAGQQVLVFLNRRGFAPTLLCHDCGWISQCPRCDARMTVHQGSGELRCHHCDHRQRPP 477 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 CP CG L PVG GTE+ E+ L LFP P+ RIDRD+TSRK A+ A ++ G Sbjct: 478 MNCPQCGKLDLRPVGAGTERAEERLRILFPHHPVLRIDRDSTSRKHAMRDLFATINSGEP 537 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQ QVAGRAGRA + G Sbjct: 538 CILVGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQQIVQVAGRAGRAEEPGR 597 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V++QTH +HPLL L GY AFAEQAL+ERR LPP+ ++RAE H A FL Sbjct: 598 VLIQTHLADHPLLVQLTEDGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEAFL 657 Query: 654 QQLRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 L + ++ +LGPVPA +R G+ R Q+LLQ SR L ++ L Sbjct: 658 DSACGAAEQLLEQIGGPEVELLGPVPAPMERRAGKHRAQLLLQCMSRAPLHRLLAPWLQA 717 Query: 712 INTIPDSRKVKWVLDVDPIE 731 + +P R+V+W LDVDPI+ Sbjct: 718 LEQLPGGRQVRWSLDVDPID 737 >UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA replication mode; also involved in double-strand break repair n=3 Tax=Alteromonadales RepID=Q3IJD8_PSEHT Length = 728 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/739 (48%), Positives = 475/739 (64%), Gaps = 21/739 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT-----VKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M VA+ VPLPRTFDY + + +K G RV VPFG Q+ ++ +V+++ +E+ Sbjct: 1 MYFVEVAIKVPLPRTFDYKVDSQLGEASAPLKPGMRVLVPFGNQR-KVAVVLALKTTTEV 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 P N++KA+ E++D P+ + LL + A YY +P+G+ + ALP LRQG + Sbjct: 60 PENKIKAIFEIIDDTPILSAEHIELLRFTARYYCYPLGETIHIALPSALRQGESPDKTSI 119 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLC 174 TE+G L SLK + Q L L Q GK ++ L F+ + +L K L Sbjct: 120 NMVALTEKGAL--LPSLK-AKTQLNLLKQLSQSGKSSLTELKALGFSKKTIDSLIDKALI 176 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + E + W++ G + LN EQA A I+ ++ FS++LL GVTGSGKTEVY Sbjct: 177 TQSIEHD--NHWQSVAPTVGSKPTLNKEQAVACTTINQSSG-FSSFLLEGVTGSGKTEVY 233 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAK 293 L LE VL +G+QALV+VPEIGLTPQT+ RFR RF + P+ + HS L D+ERL W + Sbjct: 234 LQCLEEVLKRGEQALVLVPEIGLTPQTVNRFRRRFPDTPIMLWHSALTDNERLQTWRFCE 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 AIVIGTRS++F PF LG+IV+DEEHDSS+KQQ+ RYHARDLA YRA+ +IP+I Sbjct: 294 KASCAIVIGTRSSIFLPFLKLGMIVVDEEHDSSFKQQDTLRYHARDLAAYRAYQHKIPLI 353 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQ 413 LGSATPALETL KY+LL LT RA A +LD+KGQ QAG+A A + MRQ Sbjct: 354 LGSATPALETLHKAINNKYQLLSLTERAQTATDNQFKLLDMKGQPDQAGIAHASLATMRQ 413 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 HL+ QV++FLNRRGF+P L+CH+CGW++EC RC T H+A + CHHC Q VP Sbjct: 414 HLKRGKQVMVFLNRRGFSPTLICHECGWLSECKRCSTSATFHKAIGQMICHHCGDQYHVP 473 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 QCP CGST + P G GTEQ+E+ L+ FP P++RIDRD+T RKG+LE+ L E++ GGA Sbjct: 474 HQCPDCGSTQIFPNGKGTEQIEEFLSSEFPQTPVTRIDRDSTRRKGSLEKALDEINLGGA 533 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 RIL+GTQMLAKGHHF DV+LV +LDVD L+S DFR+ E AQL TQVAGRAGR+G+ G+ Sbjct: 534 RILVGTQMLAKGHHFADVSLVVILDVDSGLYSCDFRATEHLAQLVTQVAGRAGRSGEAGQ 593 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V+LQTH PEHPLLQ L+ GY FA AL ER LPP T+ IVRA+ HN + FL Sbjct: 594 VLLQTHFPEHPLLQDLVNNGYQDFARFALREREDADLPPITNMAIVRAQGHNIKQVVDFL 653 Query: 654 QQLRNLILSSPLAD-EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 L P++ + +LGP+PA K G +R+Q+ +Q R L + + + Sbjct: 654 TDL------VPVSGVTGIQLLGPIPAPLEKVAGMYRFQLHIQAQDRRVLHQYLAQMVDYL 707 Query: 713 NTIPDSRKVKWVLDVDPIE 731 +T ++KV+W LDVDPI+ Sbjct: 708 STSKLAQKVRWSLDVDPID 726 >UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromonadales RepID=B4RY99_ALTMD Length = 729 Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/736 (47%), Positives = 468/736 (63%), Gaps = 14/736 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL--- 57 M VA+PVPL + F Y ++AG RV VPFG ++ +G+VV SE + Sbjct: 1 MAFIQVAVPVPLRQLFTYT--HDSALEAGVRVMVPFGPRK-LVGVVVETLRKSESEIDNS 57 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N+LKA+ VLD +P+ + ++ W YYHH G+VL LP+LLR+G A P Sbjct: 58 NKLKAIEMVLDHQPIVDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAGPTPQDM 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 T++G+ SL R+PKQ AL + + + A +F A++AL +K L + Sbjct: 118 LMLTDEGKKTLSASLSRAPKQNACFTALTKRAMLAIE-ARKQFGAPAVKALVEKSLAVIK 176 Query: 178 SETPEFS--DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 TPEF W + ++ E+ +TEQ+ A+ A++ F+ LL GVTGSGKTEVYL Sbjct: 177 EVTPEFKPGAWLSTLTMA-EKPVPDTEQSVAIAALNRQHGNFAVSLLEGVTGSGKTEVYL 235 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 +E +L +GKQ L++VPEIGLTPQT++RF +RF V VLHS L+D +RL W +AK G Sbjct: 236 QAIEPLLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKDRLQVWQRAKAG 295 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 E IVIGTRSA+FTP N G++++DEEHD S+KQQ+G RYHARDLA RA IP++LG Sbjct: 296 ELGIVIGTRSAIFTPLNNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLG 355 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATPALETL N +Y L+LT+RAG A+ QHVLD + Q + G++ L+T MRQH+ Sbjct: 356 SATPALETLNNALSGRYAHLQLTKRAGGAQSTHQHVLDARDQPIHYGISQGLLTIMRQHI 415 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 A NQV++F+NRRG+APALLCH CG C RC+ YT+H+AQ+ L+CHHC R +P Sbjct: 416 SAGNQVLVFVNRRGYAPALLCHHCGETVTCKRCERPYTVHKAQNRLQCHHCGGMRAMPTN 475 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C +C LV G GTEQ+EQ LA LFPGV RID DT K L Q L ++R ++ Sbjct: 476 CEACHYNELVTAGTGTEQVEQGLASLFPGVTQVRIDSDTVRGKDKLHQTLDAINRQEYQL 535 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQ+L+KGHHFP VTLVA+LD DGALFSADFR+ E+ AQL TQ+AGRAGRA K GE+ Sbjct: 536 LVGTQILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMW 595 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQTH+P HPLLQ L++ GY FA AL ER+ LPP+ S ++RAE ++ A FLQ Sbjct: 596 LQTHNPHHPLLQDLVHNGYGHFARHALMERKAASLPPFISQFVIRAEATDSSLAYRFLQD 655 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + + + + + GP P L KR GR+R+ ++ H R L + + L + + Sbjct: 656 CKQVFTQA----HAIEISGPFPCLIEKRQGRFRFMLVCSHQKRAPLHNALRLALPFLQAL 711 Query: 716 PDSRKVKWVLDVDPIE 731 P + KV+W +D+DP + Sbjct: 712 PQATKVRWSIDIDPTD 727 >UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR42_9GAMM Length = 744 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/736 (45%), Positives = 473/736 (64%), Gaps = 13/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV---KAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + VA+ PL RTFDYL+ + + GCRVRV FGK+ E IG+V+ + S+ +++ Sbjct: 14 IVRVAVLSPLRRTFDYLVTDEFVAAPPQRGCRVRVSFGKR-EVIGLVIEQTHKSDFAIDK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR--PAANAPMWY 117 LK VV V+D+EP+ S+++L +WAA+YYHHPIGD LF+ALP+ LR G+ P W Sbjct: 73 LKPVVAVIDAEPLLPESLFKLFIWAANYYHHPIGDALFNALPVRLRLGQSLPLPKVTKW- 131 Query: 118 WFATEQGQAVDLNSLK--RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 W T+ G+ L+ R KQ+ L L + + R + A LQ + +KG+ + Sbjct: 132 WRVTDTGKERGQEMLRGGRLHKQRALLDELSKKSLTRQGNILKFYTRATLQRIEEKGIAE 191 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 L P+ D + + + L LN Q A+ AI F+ WL+ GVTGSGKTE+YL Sbjct: 192 LVCIGPQEVDL--DNLLLEQPLSLNPSQQEAMDAIDCHG--FNTWLIDGVTGSGKTEIYL 247 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 +E V+ G+QALVM+PEI LTPQT RFR+RFN V ++HSGL D ERL +W +A G Sbjct: 248 QCIEKVIRYGRQALVMIPEISLTPQTEKRFRDRFNVEVAMMHSGLTDQERLESWTEAATG 307 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 +AAI++GTRSA+FTP KN G+I+IDEEHD SYKQQ+G+RY ARDLAV RA E+IPIILG Sbjct: 308 QAAILLGTRSAVFTPMKNPGIIIIDEEHDQSYKQQDGFRYSARDLAVIRAKQEKIPIILG 367 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP+LE+L N ++K+Y+ L L+ RAG+A+P ++DLK ++V++G+A + + +R+ + Sbjct: 368 SATPSLESLHNCEKKRYQHLILSTRAGDAQPPTWSMVDLKSEQVESGVAASTLNAIREAI 427 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 QV++FLNRRGFAPA+LCH CG+ AECP CD T+H+ L CHHC+ +R + Sbjct: 428 HNKQQVLVFLNRRGFAPAMLCHYCGFCAECPNCDARLTVHRRHQRLICHHCNYKRGLLHW 487 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CPSC +V G GTE+ E L FP P+ R+DRDTT +K A++ V G I Sbjct: 488 CPSCRGDRMVAAGDGTERSEAWLQECFPDTPVLRVDRDTTRKKNAMQAMYDTVDSGAPCI 547 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQMLAKGHHF ++TLVA+LD D LFS DFRS ER QL TQVAGR+GR G+V+ Sbjct: 548 LVGTQMLAKGHHFANITLVAVLDADSGLFSPDFRSHERLGQLLTQVAGRSGRGKMAGKVI 607 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQ+H P+HPLL+ L + Y ++ +R+ +LPP+ ++VRA+ + Q+A FLQ Sbjct: 608 LQSHQPDHPLLEVLTQQSYGEYSTLLRKQRKQAELPPFKQLILVRADAAHAQNAEAFLQS 667 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 R + + E + LGP+PAL +R R R+ + + R L +++ + + + Sbjct: 668 ARQCAEAIFPSGETVNYLGPLPALMERRNSRHRYVLQISGGRRSDLNFLLSQLVFELEKL 727 Query: 716 PDSRKVKWVLDVDPIE 731 P +R V+W +DVDP E Sbjct: 728 PMARHVRWGVDVDPQE 743 >UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=A6W2U3_MARMS Length = 743 Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/737 (45%), Positives = 463/737 (62%), Gaps = 12/737 (1%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV----KAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 P VALPVP+ FDY +P+ + + K G RV+VPFGK R+G++V++S+ S+ Sbjct: 10 PFIKVALPVPMRTLFDYKVPKAIALRHALKPGMRVKVPFGKSS-RLGVIVALSETSDWDP 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K + + D PV T + L WAA YYHHPIGDV+FHALP+LLR+G A + Sbjct: 69 EQVKPLTSMHDQSPVITEELMALCEWAARYYHHPIGDVIFHALPVLLRKGESAEFRTENW 128 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQ--GKIWRDQVATLEFNDAALQALRKKGLCD 175 W T +GQA+ L L R+P+QQ L A++Q + + + L+ AA ++L +KGL Sbjct: 129 WLTTPEGQALPLEQLSRAPRQQDFLKAVQQHPNGLSQHAASVLDLAPAAGKSLEEKGL-- 186 Query: 176 LASETPEFSDWRTNYAVSGERL-RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 L E F+ +A + LN EQ A + F+ LL GVTGSGKTEV+ Sbjct: 187 LRREPRSFNKGGEKHAHQTQVPPTLNPEQMRATEHLLDYRHQFNVALLDGVTGSGKTEVF 246 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L V+E ++ +GKQ LVMVPEIGLTPQT+ RF RFN + ++HS ++D ERL AWL A Sbjct: 247 LRVMERLIEEGKQILVMVPEIGLTPQTLKRFEIRFNTDIVLMHSNMSDRERLDAWLLAAC 306 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G A I+IGTRSA F P NLG+IVIDEEHD+SYKQ EG+RYHARDLA+ RA + IP++L Sbjct: 307 GHAKIIIGTRSAAFIPAPNLGMIVIDEEHDTSYKQHEGFRYHARDLAIKRAQALNIPVLL 366 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 SATP+ E+L N QK++ L+L +RAGNA +DL+G+ + G + + M+ Sbjct: 367 ASATPSYESLTNALQKRFAWLKLRQRAGNAHIPEMERVDLRGKTLVHGFSEHALASMKLC 426 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ QV++FLNRRG+AP L+CH CGWIA C CD T+H+ + L CHHCD+Q+ + Sbjct: 427 LERKEQVLVFLNRRGYAPTLMCHQCGWIAACDHCDVNLTVHKRANKLHCHHCDTQKALLH 486 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP C S L VG GTEQ+E L+ LF VPI RIDRD+T RK A+ + ++H Sbjct: 487 TCPECQSEELFTVGEGTEQIETQLSTLFKDVPILRIDRDSTQRKSAMAKLTQKIHEHDQA 546 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 ILIGTQMLAKGHHFP+VTLV ++D D LFS+DFR ER AQL TQVAGRAGRA K G V Sbjct: 547 ILIGTQMLAKGHHFPNVTLVIIMDADAGLFSSDFRGMERTAQLITQVAGRAGRAKKPGHV 606 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQT+HP+H ++ L GY+ FA LAER+ + LPP+ VI+RAE N Q A L Sbjct: 607 LLQTYHPDHAAIECLCNLGYEHFAIDGLAERKSLSLPPFYHQVIIRAESGNEQEAMQLLS 666 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 +RN + P + ++++GP A+ ++ G+ R I ++ R L + Sbjct: 667 AMRNDL--EPYFAKDVYLVGPYAAIIVRKAGQHRALISIKAAQRAPLHQATQMMTEWLEQ 724 Query: 715 IPDSRKVKWVLDVDPIE 731 ++++ +DVDP+E Sbjct: 725 STKQHRIRFAIDVDPLE 741 >UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W07_COLP3 Length = 736 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/737 (47%), Positives = 466/737 (63%), Gaps = 22/737 (2%) Query: 6 VALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VA+PVP+ + F Y +PE ++ +K G RV V FG ++ IGIV+ + ++++K Sbjct: 8 VAIPVPMRQLFTYRVPEALSSPAIKVGERVAVSFGPRKV-IGIVIDAQAQCDFEISKVKD 66 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT- 121 + L+ + S+ L A YYHHP+GDV ALPILLR+ +P W A Sbjct: 67 ITTRLNDNFNLSQSLVSFLQLCAHYYHHPVGDVFQQALPILLRKIENITLSPPMVWQAQC 126 Query: 122 -EQGQAVDLNSLKRSPKQQQALAAL---RQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + + L L++ +Q AL + G W + + TL ++ A L AL+ K L Sbjct: 127 PSEDNSDLLAKLEKKAAKQFALYQIINNHNGISWVE-LRTLGYSKAQLNALQSKALIIEK 185 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + W+ N +RL L++EQA V AI+ + FS L+ GVTGSGKTEVYL Sbjct: 186 EQVASQYTWQENTLNQADRLVLSSEQAIIVSAINHSLAQFSCHLIDGVTGSGKTEVYLQS 245 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 +E VLA +Q LV+VPEIGLTPQT+ RF +RFN P+ + HSGLND ERL+ WL A+ G A Sbjct: 246 MEEVLANNQQVLVIVPEIGLTPQTLNRFEQRFNVPIALHHSGLNDKERLATWLSAQQGSA 305 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 AIVIGTRSA+FTP LG+I+IDEEHDSS KQQ+ +RYH RD+A+ RA IPI+LG+A Sbjct: 306 AIVIGTRSAVFTPLHRLGLIIIDEEHDSSLKQQDSFRYHCRDMAILRARQLNIPIVLGTA 365 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+ E+L N KY +L RAG + A ++D+ Q+V+ GL+ L M+Q L Sbjct: 366 TPSFESLQNALSGKYSYHQLLNRAGKSNKAKIALIDMNQQQVEFGLSGTLKHEMKQTLAR 425 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+LFLNRRG+APA+ C +C W+AEC RCD YTLHQ Q L CHHC SQ+ +P QCP Sbjct: 426 GEQVLLFLNRRGYAPAINCQECHWLAECQRCDKPYTLHQKQQLLICHHCGSQKRIPPQCP 485 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCGS + P+G GTEQLE L LFP I RIDRD+T +KG L + L EV ++L+ Sbjct: 486 SCGSVRIAPLGQGTEQLESRLEELFPESSIVRIDRDSTRKKGELAKLLQEVTDKKHQLLV 545 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFPDVTLVA+LDVDGALFS DFR++E+ AQL QVAGRAGRA K G+V++Q Sbjct: 546 GTQMLAKGHHFPDVTLVAVLDVDGALFSFDFRASEQMAQLLIQVAGRAGRASKPGKVLVQ 605 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 ++ +HPLLQ L++ GY FA QAL ER+ LPP+T ++RA+ + + FL+ L Sbjct: 606 SNFVDHPLLQDLVHNGYHHFAHQALTERKQALLPPFTFQALLRADANYPSYPEKFLRALT 665 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L E GPVPA K+ G++R+ +++Q SR L I L L+ IP+ Sbjct: 666 QRRL------EGCEFAGPVPAAMEKKAGKFRYHLIIQAKSRKDLHRAI---LQLLIQIPN 716 Query: 718 SR---KVKWVLDVDPIE 731 + KV+W LD+DPI+ Sbjct: 717 NEWQGKVRWSLDIDPID 733 >UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRK6_TERTT Length = 739 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/732 (46%), Positives = 460/732 (62%), Gaps = 10/732 (1%) Query: 6 VALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VALPVPL TFDY LP A GCRV V FG Q +GI++S S ++ A Sbjct: 11 VALPVPLRNTFDYRLPTEADPTANYMGCRVAVNFG-HQAMVGIILSCHQTSTYDPAKIVA 69 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 +E+LD +P+FT + L WAADYY HP+G+ L A+P LRQG+ +A + W T Sbjct: 70 ALEILDHKPLFTAELLNLCWWAADYYQHPLGETLSTAMPTPLRQGKSSAPT-LAAWQLTT 128 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA-TLEFNDAALQALRKKGLCDLASETP 181 +G+ + +LKR+ KQQ AL L D A L+ N + A++KKGL + P Sbjct: 129 EGKGLPETALKRAKKQQIALQYLLHNDFLLDADARKLDINSTTMAAMQKKGLVEKVERVP 188 Query: 182 EFSDWR--TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 E + + + L L EQ A+ + + ++ +LL G TGSGKTE YL + Sbjct: 189 EHQAPKDAADQLLRESPLALTEEQEAALSQL--SFHRYTCYLLEGATGSGKTEFYLQAIA 246 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L GKQALV++PEIGLTPQT+ARF +RF V LHS ++DS+R + WL A++G A I Sbjct: 247 RTLQAGKQALVLIPEIGLTPQTVARFEQRFACSVAELHSNVSDSQRTNNWLAARDGRARI 306 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIGTR A P ++LG+I++DEEHD S+KQQ+G RY ARDL++YRA+ QIPI+LGSATP Sbjct: 307 VIGTRLASLCPMQDLGIIIVDEEHDLSFKQQDGLRYSARDLSIYRANQLQIPIVLGSATP 366 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE+ N ++ LRLTRRAG A+P +DL+G+ + AGL A + + + ++ Sbjct: 367 SLESFYNAIHGRFAHLRLTRRAGAAKPPTISRVDLRGKTLTAGLCDASVAVLEKTIERGQ 426 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q I+F+NRRG+AP+LLCH CGWIAECP CD TLH+A +HL CHHCD+Q+PV R CP C Sbjct: 427 QAIVFVNRRGYAPSLLCHHCGWIAECPSCDANLTLHKAPYHLHCHHCDAQKPVNRHCPQC 486 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 S L P GLGTEQ EQ L FP PI RIDRD+T +K +L++ LA V G ILIGT Sbjct: 487 NSPDLNPRGLGTEQTEQWLEERFPDTPIIRIDRDSTRQKNSLQETLAVVKSGKPCILIGT 546 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QMLAKGHHFP++ LV + D D L SAD+R ER AQL QVAGRAGR G+V++Q+H Sbjct: 547 QMLAKGHHFPNIALVVIADCDQGLMSADYRGPERMAQLVIQVAGRAGRGEIPGQVLIQSH 606 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 P+HPLL LL KGY FA Q L ER+ LPP+T ++RAE Q+A FL+ R Sbjct: 607 SPDHPLLDLLLTKGYHLFARQLLNERQTAFLPPFTHQCLIRAESKRPQNAIDFLKMARQQ 666 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + S ++L LGP+PA + R+R+Q+ + SR LQ ++ + I+ +R Sbjct: 667 LSSLMPPSQQLQYLGPIPARMERVNERFRYQLHITAGSRKALQKLLKEGIEKIDQQALAR 726 Query: 720 KVKWVLDVDPIE 731 + +W +DVDP E Sbjct: 727 RTRWSVDVDPQE 738 >UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTM7_9GAMM Length = 731 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/729 (49%), Positives = 467/729 (64%), Gaps = 17/729 (2%) Query: 5 HVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 VA+PVPL FDY +P V +AGCR+++ FG +E IGI D ++++ Sbjct: 12 QVAVPVPLYGLFDYAVPADSRVPEAGCRLQLRFG-HRELIGICCGTIDQPATAADKIREY 70 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 LDSEPV S+ LL A+ YYHHP+GDVL ALP L QGR W T+Q Sbjct: 71 QACLDSEPVIPASLMHLLQRASQYYHHPLGDVLATALPTALMQGRAVDEGGRSLWRLTQQ 130 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDAALQALRKKGLCDLASET 180 G+ L +L+R+PKQ+ +A LR+ + D A E ++++AL +K + S Sbjct: 131 GREEPLEALQRAPKQRAIVAVLRESDGYCDAGSLSARFENWRSSVKALIEKEWLEAISLP 190 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PE S AV LN EQ AV + S FS LL GVTGSGKTEVY +E Sbjct: 191 PERS------AVVRPGPELNEEQRAAVDGVPSE-QGFSTTLLRGVTGSGKTEVYFRWIER 243 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 LAQG+QALV+VPEIGLTPQ + RF +RF A + VLHSG+ D ERL +W A G A IV Sbjct: 244 CLAQGRQALVLVPEIGLTPQLLERFSQRFEANLVVLHSGMTDLERLRSWQLAAAGRAHIV 303 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +GTRSALFTP LG+IVIDEEHD+S+KQQEG+RYHARDLA RA +E IP+ILG+ATP+ Sbjct: 304 LGTRSALFTPMPALGLIVIDEEHDASFKQQEGFRYHARDLAALRAQAEAIPLILGTATPS 363 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 E+ NV+Q +YR LRL++RAG ARP I ++D + + + L+ +L + QHL A NQ Sbjct: 364 FESHHNVRQGRYRELRLSQRAGGARPPIIRMVDARQHRSGSPLSHSLDRAVEQHLAAGNQ 423 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V+LFLNRRG+AP L+C CGW ++C RCD + TLH LRCHHC S++ P CPSCG Sbjct: 424 VMLFLNRRGYAPTLICPQCGWHSDCERCDAHMTLHFQPSVLRCHHCGSEQRPPPHCPSCG 483 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 +L G GTEQL L FP ISRIDRD+T RKG+LE +L +V RG +L+GTQ Sbjct: 484 HRNLQHQGQGTEQLTMFLEERFPEATISRIDRDSTRRKGSLEAELKKVQRGEVDMLVGTQ 543 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP VTLV +LD D LFSADF++ E AQL QVAGRAGRA K GEV++Q+ Sbjct: 544 MLAKGHHFPSVTLVGVLDCDRGLFSADFKATEHMAQLILQVAGRAGRADKPGEVLIQSTQ 603 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPL+ L+ +GY+AF +QAL ER+++ LPP+ ++RAE + A FLQ +L Sbjct: 604 PDHPLMHCLITQGYEAFTQQALKERQVLGLPPFGFAALLRAESVEREAAMRFLQ---SLC 660 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 +SP D + W LGP+P+ +R GR+R Q+LL +R L ++ G + I + Sbjct: 661 PASPDGDVQ-W-LGPIPSPMERRAGRYRAQLLLLSQNRKALHVVLAGLVHTIQQQGSIKN 718 Query: 721 VKWVLDVDP 729 V+W LDVDP Sbjct: 719 VRWSLDVDP 727 >UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella grylli RepID=A8PKH0_9COXI Length = 684 Score = 626 bits (1615), Expect = e-178, Method: Compositional matrix adjust. Identities = 324/732 (44%), Positives = 455/732 (62%), Gaps = 66/732 (9%) Query: 3 VAHVALPVPLPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +A+P PL + F+YL P M +K G RV VPFGK++ +IG ++ S++S P N+ Sbjct: 14 ILKIAIPAPLHQYFEYLAPSHFPRMKLKKGLRVLVPFGKRK-KIGFLMETSESSVWPKNK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V+ +LD P+ S+ +L+ W + YYH PIG+V +ALP Sbjct: 73 LKQVITILDDFPLLPDSLQQLIEWTSRYYHCPIGEVFANALP------------------ 114 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 N+L+ ++ L++ K +D D ++ + +K L Sbjct: 115 ----------NALRSEKMSKKLKKFLKENKTHKD-------TDTSISSKSRKAL------ 151 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 LN Q AV I + F +LL GVTGSGKTEVYL V+E Sbjct: 152 ------------------PLNNHQQQAVATIIHSLGQFKTFLLNGVTGSGKTEVYLEVIE 193 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 VL +G+QALV+VPEIGLTPQ +ARF+ F+ P+ + HS L D++RL WL +K G+A+I Sbjct: 194 AVLNRGEQALVLVPEIGLTPQMLARFQTCFSVPLILFHSKLTDTQRLENWLLSKVGKASI 253 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIGTRSALFTP GVI++DEEHDSS+KQQ+G RYHARDLA+ R E IP+ILGSAT Sbjct: 254 VIGTRSALFTPLLRPGVIIVDEEHDSSFKQQKGLRYHARDLALVRGRLENIPVILGSATA 313 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE++ N QK+Y+++ L +RAG AR +DL+ +K+ G + +L+ M++HLQ + Sbjct: 314 SLESIFNAHQKRYQIIHLPQRAGMARQPSFRFIDLRHEKMDHGFSSSLLQTMKKHLQKQS 373 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QV+LFLNRRGF+P + C DCGW A+C RC+ + H+ HL CH+C +RP+ R C C Sbjct: 374 QVLLFLNRRGFSPVIRCQDCGWTADCQRCEQKMSFHKNPAHLLCHYCGYRRPLDRYCLGC 433 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 L+P+G GT++LEQTL FP + I R+DRD T RKG+ + L +H +ILIGT Sbjct: 434 QGQQLLPLGQGTQRLEQTLQKYFPHIGIVRVDRDNTQRKGSFNELLKTIHDNKGQILIGT 493 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QMLAKGHHFP+VTLV +L+ D LFSADFR+ ER QL TQVAGR+GRA K GEV++QTH Sbjct: 494 QMLAKGHHFPNVTLVGILEADSGLFSADFRALERTGQLLTQVAGRSGRADKCGEVLIQTH 553 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 HPEHPL L+ +GY +F+E L ER+ LPP++ ++ AE N + FL +++ Sbjct: 554 HPEHPLFNHLIEQGYFSFSEILLQERQRSLLPPYSYLALIHAEAFNAAYPFNFLNEVK-- 611 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + + +++ VLGPVP+L P+ G +R Q+LLQ SR LQ ++ + ++ + SR Sbjct: 612 -IQAECIKKEVNVLGPVPSLRPRCAGYFRSQLLLQAKSRYVLQRVLAQIIKPVSLLNSSR 670 Query: 720 KVKWVLDVDPIE 731 +V+W LDVDPIE Sbjct: 671 RVRWSLDVDPIE 682 >UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus capsulatus RepID=Q604F0_METCA Length = 733 Score = 615 bits (1586), Expect = e-174, Method: Compositional matrix adjust. Identities = 333/734 (45%), Positives = 462/734 (62%), Gaps = 11/734 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V VA+P+P R FDYL P G+ +++ G R+ VPFG + R+G +++V + + Sbjct: 4 VVRVAVPIPAYRCFDYLAPAGVPLESLLPGVRLSVPFGNRI-RVGYLIAVVETPGCEVER 62 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ VLD+ P+ + + +LL WAA YYHHP+G+V+ A P+ LR+G A A Sbjct: 63 LRPAAAVLDAAPLLSETDLKLLRWAARYYHHPLGEVIQSAFPVHLREGGGAELARPSGLV 122 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALR--QGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 T G A+D + +R+P Q++ LR + + ++A L + ++ ++ + Sbjct: 123 LTPAGAALDPATFRRAPVQRRLFEVLRGRERPLPASRLAELAGSGRTVRDAARRLVERGW 182 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 +E + D R AV+G L+LN Q AV I + +LL GVTGSGKTEVY+ V Sbjct: 183 AEWVDLQDRRIP-AVAGPPLQLNPAQLGAVDEISQNLGRYGVFLLEGVTGSGKTEVYIEV 241 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + V+ +G+QALV+VPEI LTPQ R RER AP+ V HSGL+++ER +AWL + GE Sbjct: 242 IRRVITRGEQALVLVPEISLTPQLERRLRERIEAPLAVFHSGLSETERAAAWLGFQKGEV 301 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +++GTRSA+F P + GVIV+DEEHD S+KQQEG+R+ ARD+AV RA IP++ GSA Sbjct: 302 GVLLGTRSAVFAPMRWPGVIVLDEEHDRSFKQQEGFRFSARDVAVMRARMADIPLVAGSA 361 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE++ NVQ+ +Y L L RAG A VLD++ +++Q GL+ LI MR L A Sbjct: 362 TPSLESIRNVQRGRYVRLVLPARAGAAVAPRYRVLDIRARRLQDGLSEGLIAAMRDTLAA 421 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 +QV+LFLNRRGFAPAL+CH CGW+A C RCD LH + LRCHHC ++ +P CP Sbjct: 422 GDQVLLFLNRRGFAPALVCHGCGWVARCRRCDANLVLHARESRLRCHHCAAEHGLPGCCP 481 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG L P+G+GTE++++ L LFP V ++RIDRD+T + +LE+ L V +G IL+ Sbjct: 482 SCGQEDLRPLGVGTERVDEALRRLFPEVGVARIDRDSTRGRRSLERMLERVQQGEVGILL 541 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLV +LDVD +S DFR+AE AQL QVAGRAGR GK G V+LQ Sbjct: 542 GTQMLAKGHHFPGVTLVGILDVDAGFYSTDFRAAEHTAQLIVQVAGRAGRGGKPGTVLLQ 601 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T HP+HPLLQ LL GY FA LAER LPP+ + RAE + FL +LR Sbjct: 602 TRHPDHPLLQRLLRDGYPGFAAAELAERESACLPPFGYQALWRAESKELALSMDFLARLR 661 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 + + + LGP PA P++ GR+R Q+ L+ R L ++ LA + P+ Sbjct: 662 E---EADGKNGAVHWLGPAPAPMPRQAGRYRAQLWLKSARREELHAVLTDALARLQETPE 718 Query: 718 SRKVKWVLDVDPIE 731 R+V+W LDVDP++ Sbjct: 719 -RRVRWSLDVDPVD 731 >UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E46_THICR Length = 774 Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust. Identities = 337/729 (46%), Positives = 447/729 (61%), Gaps = 34/729 (4%) Query: 29 GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 G RV+VPF + + IGIV+++SD + + +LKA+ +V+D P+F+ LL WA+ YY Sbjct: 52 GGRVKVPF-RNKSLIGIVMALSDDATVATQKLKALEDVIDEMPIFSEQEMALLSWASHYY 110 Query: 89 HHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG 148 H PIG+V+ ALP LR+G A + W TE G+ D R+ QQ+AL L Q Sbjct: 111 HEPIGNVVQTALPKRLREGEAVDVAGVSAWQLTEAGREADEQIPSRA-TQQKALWQLLQQ 169 Query: 149 KIWRDQVATLEFNDAALQALR-------KKG-LCDLASETPEFSDWRTNYAVSGERLRLN 200 + D+ T E + +L R +KG + + R A G L N Sbjct: 170 Q---DEALTAEVLNRSLNQWRLPMKRFQEKGWVAETEKSCLHAMPVREKTARPGHIL--N 224 Query: 201 TEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 EQ AV A+ A F A+L+ GVTGSGKTEVYL ++E+V+AQGKQ LV+VPEIGLTPQ Sbjct: 225 AEQQAAVDAV-LATSGFDAFLVEGVTGSGKTEVYLGMIESVIAQGKQVLVLVPEIGLTPQ 283 Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 T+ RF APV V+HSGLND ER AW K + +++GTRSA+FTPF +LG+ ++D Sbjct: 284 TVKRFEAYLQAPVAVMHSGLNDKERHCAWSLVKTHQVNVLLGTRSAIFTPFADLGLCIMD 343 Query: 321 EEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR 380 EEHD S+KQQ+G+RY ARD V RA E +P++LGSATP+LETL N +Y+ L L +R Sbjct: 344 EEHDLSFKQQDGFRYSARDCLVRRAQLENVPVVLGSATPSLETLHNALSGRYQHLHLKQR 403 Query: 381 AGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 AG A+ +LD++GQ + G++ L + HL+A QV+LFLNRRGFAP L+CHDCG Sbjct: 404 AGQAKMPEVQLLDVRGQAEEEGISQPLRQEVETHLKAGGQVLLFLNRRGFAPVLMCHDCG 463 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 W A CP CD T HQ + LRCHHC Q P CP+CGS +G GTE+LE + Sbjct: 464 WQAACPSCDANMTFHQQVNELRCHHCGYQAKAPLDCPNCGSASFAKIGQGTERLETVVQQ 523 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 FP + R+DRDTT KG + + +G A ILIGTQMLAKGHHFP VTLV LLD+D Sbjct: 524 WFPDYKVLRVDRDTTRNKGQMMALTEQASQGRADILIGTQMLAKGHHFPKVTLVGLLDID 583 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 LFS DFR+AER AQL QV+GRAGR + G+VV+QTHHPEHPLL+ L+ +GY+AFA++ Sbjct: 584 QGLFSCDFRAAERMAQLVVQVSGRAGRGERPGQVVIQTHHPEHPLLKVLVARGYEAFAKE 643 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI-----------LSSPLADE- 668 AL ER LPP+ V++RAE + FL +++ + LS +D+ Sbjct: 644 ALKEREQADLPPYQYQVLLRAEAVDANAGWTFLNDVKSALNFAKMSMLRSYLSVNDSDDI 703 Query: 669 ------KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 L V GPV A +R GR+R+Q+LLQ R L + + T ++KV+ Sbjct: 704 KAEMLQGLEVFGPVSAPMLRRQGRYRYQLLLQGAHRGFLHQWLAQVETQLYTSNQAKKVR 763 Query: 723 WVLDVDPIE 731 W LDVDP E Sbjct: 764 WSLDVDPQE 772 >UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanella marisrubri RepID=Q1N0U9_9GAMM Length = 733 Score = 603 bits (1555), Expect = e-171, Method: Compositional matrix adjust. Identities = 332/737 (45%), Positives = 459/737 (62%), Gaps = 29/737 (3%) Query: 6 VALPVPLPRTFDY--LLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +AL PL +TFDY L M + G RV VPFG++ E +G+++ + + ++ +++K Sbjct: 9 IALDKPLNQTFDYEPLANSRMHDYQIGMRVNVPFGQRSE-VGLILDIHNQPDIAPHKIKP 67 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + E +D PV + + +L LW +YYH P+G+ LF LP+LLR+G+ A A + E Sbjct: 68 IKERIDDSPVLSSELMKLGLWLHEYYHQPVGECLFTLLPVLLRKGQ-TAKATQEKHYCLE 126 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQG--KIWRDQVATLEFNDAALQALRKKGLCDLASET 180 +D ++R+P+Q+ L L++ K+ Q F + + L K L SE Sbjct: 127 H---LDWQKVERAPRQKAFLEWLQKQNHKVSHKQALDAGFTPSIIGQLIDK---QLVSEL 180 Query: 181 PEFSDWRTNY-AVSGER----LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 W+ N+ A+ G+ L LN EQ A+ I S + F+ LL GVTGSGKTEVYL Sbjct: 181 -----WQDNFNALCGDSVEQALALNKEQEQALKGI-SEKNGFNPVLLEGVTGSGKTEVYL 234 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA--- 292 + + + Q KQ LV++PEIGLTPQT+ RF++RFNA + +LHSGLND +RL+AWL+A Sbjct: 235 QAISSAVTQRKQVLVLIPEIGLTPQTVQRFQQRFNADILLLHSGLNDQQRLNAWLQASRH 294 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 KN +A I+IGTRSA+FT NL I++DEEHD+SYKQQEG RYH RD+AV RA IPI Sbjct: 295 KNEKAQIIIGTRSAVFTEMPNLDFIIVDEEHDASYKQQEGIRYHGRDIAVIRAAKRNIPI 354 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMR 412 ILGSATP+L++L N KKY+ +RLT+RAG+A PA + D++ Q V+ G+A L+ + Sbjct: 355 ILGSATPSLDSLHNALVKKYQHIRLTQRAGDASPANLEIYDIRKQSVEHGIADELLQHIE 414 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 + L+ +Q ++F+NRRGFAP L C DCGWI+EC RCD TLHQ HL CHHCD ++ + Sbjct: 415 ETLEQGDQALVFINRRGFAPTLYCPDCGWISECKRCDARMTLHQKPAHLHCHHCDHKQTL 474 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P QCP+C ST + +G GTE+LE L F + RIDRD+T K A+EQ L VH G Sbjct: 475 PHQCPNCLSTRIQAMGAGTERLETHLEYRFRRHKVIRIDRDSTQGKDAMEQLLQPVHNGE 534 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 IL+GTQMLAKGHHFP V LV +L+VD FSADFR+ E+ AQL QVAGRAGR G Sbjct: 535 PCILVGTQMLAKGHHFPKVNLVIMLNVDSGFFSADFRAMEKTAQLILQVAGRAGRESHGG 594 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 ++QT +HPLL L + Y A A L ER++ LPP+ +VRA+ N + A + Sbjct: 595 RAIIQTEFADHPLLHLLSEENYHALALALLEERKLHSLPPYAHQALVRADSPNPKEAEQY 654 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 L +L I PL + + +GP+P+ R GR+R Q+ ++ R RLQ+ + L+ Sbjct: 655 LHRLLQNI--KPLTENGISFIGPLPSPMELRAGRFRSQLWIRSHQRSRLQNFLKNIEPLL 712 Query: 713 NTIPDSRKVKWVLDVDP 729 KV+W LDVDP Sbjct: 713 YQQKGFNKVRWSLDVDP 729 >UniRef50_Q21H75 Transcription elongation factor GreA / replication restart DNA helicase PriA n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21H75_SACD2 Length = 736 Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust. Identities = 317/733 (43%), Positives = 442/733 (60%), Gaps = 15/733 (2%) Query: 6 VALPVPLPRTFDYLL-----PEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +ALPVPL RTFDYL P G+ GCRV+ PFG Q IGI++ V SE P +++ Sbjct: 8 IALPVPLRRTFDYLTNFQGDPNGLI---GCRVQAPFGNQ-TLIGIIIGVKAQSETPADKM 63 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-RPAANAPMWYWF 119 K + ++D P+ +H +L WAA+YYHH +G+VL ++P LRQG R + W Sbjct: 64 KDIHTIIDDTPLISHLDLQLFSWAANYYHHSLGEVLHASIPQKLRQGERQEHEQLISAWK 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQG-KIWRDQVATLEFNDAALQALRKKGLCDLAS 178 T +G + +L RS KQQ+ L Q + R L F+ +A++AL+ K L + Sbjct: 124 HTPEGMGLPETALNRSKKQQEIHRYLLQNTQFTRSTAQRLGFSTSAIKALKDKNLIEEIL 183 Query: 179 ETPEFSDWRTNYAV-SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 +TN ++ + L LN EQ A ++ F A+LL GVTGSGKTEVYL + Sbjct: 184 VKDSIEQVQTNNSLLNNTPLTLNQEQTAAQESV--IFHRFGAYLLDGVTGSGKTEVYLQL 241 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + L G QALV++PEIGL+PQT+ RF++RF+ + LHS +N+++R W AK+G A Sbjct: 242 VARALQAGTQALVLIPEIGLSPQTVGRFKDRFSVEIAELHSSINEAKRAEHWQAAKSGRA 301 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IVIGTR A G+I++DEEHD SYKQ +G+RY ARD+ VYRA IP++LGSA Sbjct: 302 KIVIGTRLAALAALNKPGIIIVDEEHDLSYKQHDGFRYSARDICVYRAKQHNIPVVLGSA 361 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LETL N +Y+ L+LT+RA A P +D++ Q++ AGL + I +R LQ Sbjct: 362 TPSLETLNNAITGRYQHLKLTQRASTATPPHIESIDIRNQQLTAGLCESAIEEIRHTLQR 421 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q ++FLNRRGFAP+L CH CGW A+C C+ T H HL CH CD Q VPR CP Sbjct: 422 QQQALVFLNRRGFAPSLFCHHCGWQAKCTGCELPMTFHSHPRHLHCHRCDRQNGVPRACP 481 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SC + G GTEQ+E LA FP P+ RIDRDTTS K A+++ L + G IL+ Sbjct: 482 SCKNQAFSHRGSGTEQIELFLAKQFPNTPVIRIDRDTTSSKKAMQKLLEPAYAGTPCILV 541 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHH P + L + D D L SAD+R E+ QL TQVAGRAGRA G+V++Q Sbjct: 542 GTQMLAKGHHIPGINLAVIADADQGLMSADYRGVEQVGQLVTQVAGRAGRASSTGKVLIQ 601 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH P+HPL++ L+ +GY++FA Q LAER+ LPP+ ++R+E ++A LQ + Sbjct: 602 THQPDHPLMRVLIAEGYNSFAVQLLAERKHSGLPPYGYSALIRSESKRPENALAILQLIH 661 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 I ++ + +GP+ A K G R+R+Q L SR L + L+ + + Sbjct: 662 GAIKNTG-NKHTITTIGPMAAPIEKIGNRFRFQYQLFCNSRKELHATLKAVLSEVEVKAE 720 Query: 718 SRKVKWVLDVDPI 730 +R+ +W +D+DP+ Sbjct: 721 ARRTRWSVDIDPV 733 >UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=17 Tax=Acinetobacter RepID=B0VLQ8_ACIBS Length = 742 Score = 597 bits (1540), Expect = e-169, Method: Compositional matrix adjust. Identities = 332/738 (44%), Positives = 456/738 (61%), Gaps = 25/738 (3%) Query: 6 VALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLN--ELK 61 VA+PV L TFDY L + +A G RV + FG+Q IGI+ D E +LK Sbjct: 16 VAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQ-NLIGIITEKVDPQESFTGNFQLK 74 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA-ANAPMWYWFA 120 A+ E+LD EP+ V LL W+A YY PIG+V+ ALP LLRQG+P +W Sbjct: 75 AISELLDDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIP 134 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALR--QGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + +A+ LKRS KQQ A L+ + + A L+AL+KKGL D Sbjct: 135 CDNAEAL----LKRSIKQQDAYQILKLHPAGTTENILNLSGVETATLKALQKKGLVDCTL 190 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 E +FS A L LN +Q A + +A + A+LL G+TGSGKTEVYL ++ Sbjct: 191 EPHDFSPAPVQLAQMP--LTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGKTEVYLHIM 248 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 VL QGKQ LV+VPEIGLTPQTI+RF+ RFN + +LHSGLNDS+RL AW +A+ G+A+ Sbjct: 249 HEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKAS 308 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR H + P++LGSAT Sbjct: 309 IILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVLLGSAT 368 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P++++ V+ K L+L +RAG+A H++DLK K Q G++ LI +++ L Sbjct: 369 PSIDSYHLVETGKLTALQLNQRAGHALLPKMHLIDLKIVKKQHGISQPLIEQIKNTLARK 428 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQCP 477 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P CP Sbjct: 429 EQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTVHRLPDHCP 488 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C L +G GT ++E+ L LFP + R+DRD+TSR G+ ++ + + IL+ Sbjct: 489 ECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILL 548 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V LQ Sbjct: 549 GTQMLAKGHHFPHVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQ 608 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL---- 653 T P+HPLL TL+ K Y A A+Q LAER++ LPP+ V++RAE + + FL Sbjct: 609 TLRPDHPLLTTLIEKDYRAVAKQTLAERKVALLPPYRYAVLIRAESKDRDYTLHFLNEAA 668 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 +QLR ++ + D +W GP+PA ++ GR+R +++ R RL + A + Sbjct: 669 EQLRQ--IAGGIVD--IW--GPIPAPMERKAGRYRAHMVILSADRTRLHFYLRQWWAQLV 722 Query: 714 TIPDSRKVKWVLDVDPIE 731 P +++ +DVDP E Sbjct: 723 HAPRQHQLRLSIDVDPQE 740 >UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYU8_9GAMM Length = 746 Score = 590 bits (1520), Expect = e-167, Method: Compositional matrix adjust. Identities = 329/746 (44%), Positives = 450/746 (60%), Gaps = 24/746 (3%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 VALPVP+ FDY + GCRVRVPFG + + +GIVV+ + S+L N +K V+ Sbjct: 4 QVALPVPIDSVFDYRVVGDALPAIGCRVRVPFGAR-KLVGIVVAHIEHSQLTQNAIKPVL 62 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 ++LD P+ ++ +L W + YY +P+GDV LP L+RQG + W Sbjct: 63 DILDERPIVDEALLKLAYWLSAYYCYPLGDVFAVMLPTLIRQGM-TLDYRQLCWQQLRDA 121 Query: 125 QAVDLNSLKRSPKQQQALAAL---RQGKIWR-----DQVATLEF-------NDAALQALR 169 D ++ + +QQ AL L G R D EF A L+ Sbjct: 122 TDEDFSASAKKQRQQFALCELVINSHGNSHRNSHGNDTKLVTEFALIDHGVEPAYLKKFE 181 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTG 227 +KGL + P ++ L LN +Q AV I A + +LL G+TG Sbjct: 182 QKGLIAPVYQMPSLPKLAK---LATTPLTLNLQQQQAVQKITRACQQPHYEGFLLNGITG 238 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVYL V++ VLAQGKQ L++VPEIGLTPQT RF ERF+A V +LHSGLND+ RL Sbjct: 239 SGKTEVYLQVMQTVLAQGKQVLILVPEIGLTPQTRQRFAERFDAQVLMLHSGLNDTVRLD 298 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + + G A I+IGTRS++ PF NLG+I++DE HD SYKQQ+ RYHA D+A+YR Sbjct: 299 GWQQCRLGYAQIIIGTRSSVLYPFANLGLIIVDESHDQSYKQQDSLRYHASDVALYRGFQ 358 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPAL 407 P+ILG+ATP+LE+L VQQ K L LT+RAG+A+PAI ++D + Q Q GLA +L Sbjct: 359 LNCPVILGTATPSLESLYLVQQGKLTELTLTQRAGDAKPAIMQLIDARQQAWQNGLAQSL 418 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHC 466 I +RQ L D QV++FLNRRG+AP LLC CGW A+CPRCD + T+H Q L+CHHC Sbjct: 419 IQAIRQTLDKDEQVLVFLNRRGYAPILLCDACGWQADCPRCDAHLTVHFQPVAMLKCHHC 478 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 D Q+ +P CPSCGS++L PVG+GT ++ + L LFP VP+ +IDRDTT +K + EQ Sbjct: 479 DWQQAIPNHCPSCGSSNLDPVGMGTARMVEGLIELFPDVPVIQIDRDTTRKKNSWEQVYQ 538 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + IL+GTQM+AKGHHFP+VTLVA+ + D S+DFRS E AQL QVAGRAG Sbjct: 539 RIADNPKAILVGTQMVAKGHHFPNVTLVAIPNADRGFLSSDFRSPEHTAQLIIQVAGRAG 598 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 RA K G V++QT PE+P L TL+ +GY +FA+Q LAERRM+ LPP T +VR E + Sbjct: 599 RADKAGLVLIQTLQPENPALLTLVREGYLSFAQQLLAERRMLGLPPLTYACLVRVESKSL 658 Query: 647 QHAPLFLQQLRNLILSSP-LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 ++ L Q L+ S + + + GPV A K+ R+ +L+ +R Q ++ Sbjct: 659 ENNQQILHQAIALLPSRQHMTALGIAINGPVDAPMAKKNSRYHSHLLILTKTRHVRQQLL 718 Query: 706 NGTLALINTIPDSRKVKWVLDVDPIE 731 + +P ++ + +D+DP+ Sbjct: 719 SDWWRQTIALPSAKYARLSIDIDPMS 744 >UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Marinobacter RepID=A1TYV0_MARAV Length = 723 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 324/731 (44%), Positives = 448/731 (61%), Gaps = 17/731 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 A +AL PL R FDY +PE MTV G RV+VPFG+Q G+VV + LK Sbjct: 6 TARIALNRPLRRLFDYRIPETMTVSPGQRVKVPFGRQT-LTGLVVETGVTPPDGIT-LKP 63 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 ++EVL+ + ++LL WA+DYY HP+G+ LF ALP LR+GRP+ +W T+ Sbjct: 64 ILEVLEPWLALPAATFQLLSWASDYYQHPLGECLFTALPPALRRGRPSQQKQDEHWQGTQ 123 Query: 123 QGQAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 ++ L + +Q+AL A R I ++ FN +++L KGL +L Sbjct: 124 -----NIAPLPANAHRQKALLEAIQRAPGISTGELVKAGFNRTQIKSLHDKGLIELTE-- 176 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 P+ A + E L+ Q A + A D FSA LL G+TGSGKTE+YL L+ Sbjct: 177 PQLPAC-NQTAGTVEGPELSPAQLAAAKDLPQATDRFSATLLYGITGSGKTELYLHYLKQ 235 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L +QAL++VPEI LTPQT+ARFR F + + HS LND ERL WL+ +NGE I+ Sbjct: 236 QLQADQQALILVPEINLTPQTLARFRRYFGSRIVAWHSALNDGERLDTWLRIRNGEPVIL 295 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+ PF NL I++DEEHDSSYKQ EG+RY RD+AVYRAH + P+ILGSATP+ Sbjct: 296 IGTRSAVLLPFTNLRAIIVDEEHDSSYKQGEGFRYSGRDVAVYRAHLNKCPVILGSATPS 355 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE+ N +Q KY L+RL +RAGNA P +LD++ + ++AGL+ + +++ L Q Sbjct: 356 LESWHNARQGKYHLIRLEQRAGNALPPEVALLDIRSRPLEAGLSRPTLNAIKEVLTRGEQ 415 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 ++F+NRRGFAP ++C DCG + ECPRCD T H+ +RCHHCD Q CP C Sbjct: 416 ALVFVNRRGFAPIMMCFDCGHMEECPRCDTRLTYHRRDRAMRCHHCDFQMAASHTCPKCR 475 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S + PVG GTE+ E+TLA FP PI R+DRD+T RKG+++ LA+V+ G IL+GTQ Sbjct: 476 SENFKPVGQGTERTEETLAEQFPDTPIVRVDRDSTQRKGSIQGILAKVNSGEPCILVGTQ 535 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGH FP+VTLV +++ DG LFS DFR+ E+ Q QV+GRAGR K G+V++QT H Sbjct: 536 MLAKGHDFPNVTLVTVVNADGGLFSVDFRAPEQMVQTLLQVSGRAGRGEKPGKVLIQTCH 595 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 +HPLL++L Y A A+Q L ER+ LPP+ + I+RAE Q + LQ L ++ Sbjct: 596 SDHPLLKSLCQGNYAALADQLLTERQTGALPPFRAMAILRAEADTMQAS---LQLLDSIK 652 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + W GP+PA+ ++ R R Q++L R +L H++ ++ Sbjct: 653 PKTAANGIETW--GPLPAVIARKADRHRAQLILCSNHRRQLNHLLTHVCQYLDQCKLPAS 710 Query: 721 VKWVLDVDPIE 731 KW++DVDP E Sbjct: 711 TKWIVDVDPQE 721 >UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0E3_9GAMM Length = 726 Score = 587 bits (1514), Expect = e-166, Method: Compositional matrix adjust. Identities = 322/735 (43%), Positives = 449/735 (61%), Gaps = 20/735 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY G+ G RV VPF ++Q R+GI+++ ++ E+ + LK Sbjct: 4 VYQVCIPHTHRDFFDYEAEAGLNPCVGARVWVPF-RKQTRLGIILAKNEFQEVT-SSLKC 61 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM--WYWFA 120 + V+D EP+ + L W + YY P+ +VL ALP R G+ PM +Y A Sbjct: 62 ISAVIDEEPLIQRDILALCAWISSYYQSPLSEVLPLALPKKYRLGQDC-QLPMGDFYQLA 120 Query: 121 TEQGQAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 A L + R+ KQ + + A + + + + F + LQ L + L+ Sbjct: 121 LPVTNAKQLVPV-RARKQLELIDFLATQTEPVSKHCLTQRGFTSSQLQKLLAAQIIFLSQ 179 Query: 179 ET--PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 ++ PE +D + A+S LN EQA AV AI + +LL GVTGSGKTEVYL Sbjct: 180 QSMVPECADTPMSPALS-----LNPEQAEAVTAISEQLQQYQCFLLQGVTGSGKTEVYLQ 234 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 V+ NVL QGKQ LV+VPEIGLTPQ +ARF RFN + V+HS LN+SER AW AK + Sbjct: 235 VIANVLQQGKQVLVLVPEIGLTPQLLARFTARFNQAIAVIHSSLNESERQIAWQLAKENK 294 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 +VIGTR+A+FTP +LG+IVIDEEHD+S KQ EG RY ARD A+ RAH IPIILGS Sbjct: 295 VKMVIGTRAAIFTPMPDLGLIVIDEEHDTSLKQMEGVRYSARDTALMRAHLANIPIILGS 354 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE++ N +Q KY+LLRLT +A + P ++DL+ Q +Q GLA + +++HLQ Sbjct: 355 ATPSLESVHNSKQGKYKLLRLTHKALSTTPLHYQLIDLRAQTLQHGLAIPTLHLIKEHLQ 414 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 NQV++F+NRRGFAP LLCH CGW+A+C CD + TLH+ + CHHC + P C Sbjct: 415 KKNQVLVFINRRGFAPVLLCHQCGWMADCRACDSHLTLHKQAGQMICHHCGLTQRTPTYC 474 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 SC S L+PVG GT+++ + L+ FP + RIDRD +K AL++ L +HRG A+++ Sbjct: 475 RSCQSNELIPVGAGTQRVHEFLSSYFPETHVVRIDRDAVRKKNALDEHLEMIHRGEAQLI 534 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFP ++LV +LD D L++ DFR+ E+ QL TQVAGRAGRA G+V++ Sbjct: 535 VGTQMLAKGHHFPRLSLVVVLDADAGLYNQDFRALEQLGQLLTQVAGRAGRAEHAGQVLI 594 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH P+HPLL L+ +GYD FAE L R+ QLPP+ ++RA+ FLQ Sbjct: 595 QTHLPDHPLLNVLIQQGYDDFAEALLTTRQQAQLPPFHYLAVIRAQGKIAGSVLKFLQAA 654 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + + S PL V+GP PA P++ ++R Q+L++ SR L+ + + Sbjct: 655 KEHMQSHPLT-----VMGPAPAPLPRKANQYRMQLLIKSSSRKVLKTSLTQLRTWLTINK 709 Query: 717 DSRKVKWVLDVDPIE 731 S V+W +DVDP++ Sbjct: 710 LSNGVRWNVDVDPMD 724 >UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E458 Length = 772 Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust. Identities = 331/763 (43%), Positives = 450/763 (58%), Gaps = 43/763 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVS-VSDASELPL-- 57 M + +A+PVPL +TF+Y + V+ G RV+V F + +G+VV V+ E+PL Sbjct: 19 MAILAIAVPVPLRKTFNYTYAQ--PVELGVRVQVSFAN-RPLVGVVVGCVNSIDEIPLEQ 75 Query: 58 ----NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 N+ K + VLD P+ + S LL W A YY HP+G+V+ ALP LR +P ++ Sbjct: 76 QGDPNKYKPIDAVLDDTPMLSQSWLSLLHWLASYYQHPLGEVVQTALPNALR--KPQSSQ 133 Query: 114 PMWYWF-------------ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL-- 158 P + Q V LKR+PK Q ALA K V +L Sbjct: 134 PTLINVLALSPTLQAINVPGNDITQTVPFIHLKRAPK-QFALACFVAAKTQSGTVDSLTK 192 Query: 159 -----EFNDAALQALRKKGLCDLASETPEFSDW-----RTNYAVSGERLRLNTEQATAVG 208 F+ A + AL KK + + W ++A E L N EQ+ A+ Sbjct: 193 DEVKQHFSSALINALIKKEILIESQHQLTSGCWFDRVGAEHFAHIAE-LPANVEQSVAIS 251 Query: 209 AIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER 268 I + + FS +L+ G+TGSGKTEVYL V+ VL Q +Q L++VPEIGLTPQT++RF R Sbjct: 252 GISAQLNQFSCFLIEGITGSGKTEVYLQVINKVLQQRQQVLILVPEIGLTPQTVSRFESR 311 Query: 269 FNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYK 328 F V VLHSGL D+ERL W +A+ + IVIGTRSA+FTP LG+I+IDEEHD S+K Sbjct: 312 FGITVGVLHSGLTDTERLVVWQQARLNQIGIVIGTRSAIFTPLPELGMIIIDEEHDDSFK 371 Query: 329 QQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAI 388 QQ+G RYHARDLA+ A + IPI+LG+ATP LE+L K++ +L +RAGNA A Sbjct: 372 QQDGLRYHARDLAIMLAQKQGIPIVLGTATPVLESLHRALTGKFQHFKLEQRAGNATVAP 431 Query: 389 QHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRC 448 H++D+ Q + GLAPA + M+ HL NQV+LF+NRRGFAPA++C CG + +C C Sbjct: 432 VHLIDICQQPLHYGLAPATLDVMQSHLSQGNQVLLFINRRGFAPAVVCSSCGHVEDCHAC 491 Query: 449 DHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 D T H+ Q + CH C +Q P C CG++ L+ G+GTEQLEQ L LFP Sbjct: 492 DKPMTYHKTQSRMVCHQCLAQASAPHHCSVCGASELITQGIGTEQLEQGLNELFPQYSTI 551 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 RID D+ K L Q + V++ +IL+GTQ+LAKGHHF VT V ++DVDGALFSADF Sbjct: 552 RIDSDSMRGKHTLSQTIEAVNQRKHQILLGTQILAKGHHFAHVTCVVIMDVDGALFSADF 611 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 R+ E+ AQL TQ++GRAGRA K GE LQT P HPLLQ L+ GY FA AL ER Sbjct: 612 RAPEKLAQLITQISGRAGRADKPGETFLQTTQPGHPLLQDLVNNGYGHFARFALHEREQA 671 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 LPP+T VI+RAED + Q A LQ R+L+ + + + +GPVP L K+ R R Sbjct: 672 ALPPFTYQVILRAEDESPQRATQLLQFARHLLTNM----QNISTIGPVPCLIEKKQTRHR 727 Query: 689 WQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + +++Q P R Q +++ + + +V+W +DVD I+ Sbjct: 728 YMLIIQSPYRNLRQKVLDTIIDDYAKYANKLRVRWSIDVDNID 770 >UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5C3_9GAMM Length = 727 Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust. Identities = 310/735 (42%), Positives = 454/735 (61%), Gaps = 19/735 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDAS-ELPLNEL 60 + +A+P PL + FDYL E +AG RVR+ F + IGIV+ D + ++ +L Sbjct: 4 ILQIAVPCPLRQLFDYLSEEPENHWQAGMRVRINFANR-SCIGIVIKARDVTNDIDTRKL 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+ E LD + + + + +LW + YYHHP+G+ ALP LR+G + +WF Sbjct: 63 KAIDEKLDDQALIPEEILQTVLWVSRYYHHPLGECFQAALPKQLRKGETSDLQLENWWFK 122 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT---LEFNDAALQALRKKGLCDLA 177 T+Q ++ K KQQ + L Q A L ++L+AL +K L Sbjct: 123 TDQQ-----SNKKLGTKQQACIDFLNDYPDGISQAAMKAHLGTVLSSLKALEQKNLVK-Q 176 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 P+ + +V E LN +Q T + A+ F +LL G+TGSGKTEVY + Sbjct: 177 EPFPKLPIAQVELSVPFE---LNNKQKTVIEAVWQKKAQFQPFLLEGITGSGKTEVYTEL 233 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 E ++A+GKQ L+++PEIGLT Q + RF++R N + VL+S ++D +R WL AK G A Sbjct: 234 TEKIIAEGKQVLILIPEIGLTGQFVDRFKKRLNTNIVVLNSAVSDGDRKQGWLLAKRGLA 293 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 ++IGTRSA+FTP + G+I+IDEEHD+SYKQQ+G +YHAR++A+ RA IP+++GSA Sbjct: 294 KVIIGTRSAVFTPLPDAGLIIIDEEHDASYKQQDGLKYHARNVALIRAQKRGIPVLMGSA 353 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 TP+LE+L V+Q++Y+LL+L +RAG A P +Q ++D GL+ L+ M QHL Sbjct: 354 TPSLESLYQVEQQRYQLLQLKQRAGGAALPKVQ-LIDSNAAHPDHGLSQLLLKNMHQHLN 412 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQVILF+NRRG+AP L+CHDCGW A+C CD +HQ ++ L CHHC + + C Sbjct: 413 AGNQVILFINRRGYAPVLMCHDCGWQAKCQHCDARMVVHQQRNILFCHHCGFIQRLLEAC 472 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P C S L G GTE++EQ L LFP + R+DRDTT R A +A++ +G ARIL Sbjct: 473 PECESKQLKSYGAGTEKIEQVLQKLFPDTAVVRVDRDTTQRVNAFNDIVADIKQGQARIL 532 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH F DVTLV +LD D L+SADFR+ E AQ+ TQV GRAGR K+GEV++ Sbjct: 533 VGTQMLAKGHDFHDVTLVGVLDTDQGLYSADFRATENLAQMITQVTGRAGRGDKKGEVII 592 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 Q+ P+HP ++L+ +GY A+ L ER M +PP ++ ++RAE A FLQ + Sbjct: 593 QSQQPQHPFWESLIQQGYKKTAQDLLQERIDMAMPPVSNWAVIRAEAQERHQAMDFLQAV 652 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 +++ S+ + + +LGPVPA+ K+GGR+R Q+LL R L +++ + I + Sbjct: 653 TSILHST--QQQHVLILGPVPAIMEKKGGRFRAQLLLTCQQRKPLHQLLDQHIQAIGSHK 710 Query: 717 DSRKVKWVLDVDPIE 731 +RK++W +D+DP++ Sbjct: 711 LARKLRWSIDIDPMD 725 >UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENF9_ACIF5 Length = 720 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 337/732 (46%), Positives = 445/732 (60%), Gaps = 29/732 (3%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 +A+ VPL R F Y P ++ G RVRVPFGK R+GIV+ AS P LK + Sbjct: 9 QIAVMVPLRRIFSYAPPPEGRLQPGMRVRVPFGKG-SRVGIVLGY--ASCPPDVTLKPIG 65 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN-APMWYWFATEQ 123 +VLD+ PV ++ +L+ + A YYHHPIGD ALP LLRQGRP AP Y + ++ Sbjct: 66 QVLDAHPVLPSALQQLVQFGAAYYHHPIGDAWATALPTLLRQGRPLPEPAPQGYRLSIDE 125 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL----EFNDAALQALRKKGLCDLASE 179 Q + +R P + Q ALR+ I V T E QA+R+ + + + Sbjct: 126 AQ-----TAQRQPGKLQQ--ALREHLITHRVVHTTAIPKELRATLRQAVRRGWIEAVMED 178 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 TP T A S L NTEQA+AV + A F+AWLL GVTGSGKTEVYL + Sbjct: 179 TPP-----TQVAPSPHCL--NTEQASAVTQLRMARG-FNAWLLEGVTGSGKTEVYLEAIR 230 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAA 298 L G Q LV+VPEIGLTPQ + R + RF A V LHS +D ERL W A G Sbjct: 231 PHLESGAQILVLVPEIGLTPQLVERCQMRFGARRVAALHSAQSDGERLRIWAAAAAGRIQ 290 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 ++IGTRSA+F P L +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSAT Sbjct: 291 VIIGTRSAVFVPLPRLAMIVVDEEHDPSFKQQNGWHYSARDLAIQRARLENIPIVLGSAT 350 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P+LE+LCN Q+ +YR L+L +RA +A + ++ L+ + +Q G++ L+T ++ L+A Sbjct: 351 PSLESLCNAQKGRYRHLQLRQRATSADLPVMTIVPLRRENLQGGISTTLLTACKETLEAG 410 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 NQV+LFLNRRG+APA+LCHDCG + +CPRC T H+ Q LRCHHC + P+ CP+ Sbjct: 411 NQVLLFLNRRGYAPAVLCHDCGHVIQCPRCSAPMTWHRRQERLRCHHCGHESRWPQACPA 470 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C ST L+ G GTEQLE+ L FP PI RIDRD + +L +A++ + A IL+G Sbjct: 471 CHSTALITAGQGTEQLEEVLRQRFPQTPIWRIDRDALHDRDSLATAVADIRQNRAAILVG 530 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGHHFP VTLV +++ D LFSADFR+ ER Q QVAGRAGR + G+V+LQT Sbjct: 531 TQMLAKGHHFPAVTLVGIINTDQGLFSADFRAPERLLQTVVQVAGRAGREERPGQVLLQT 590 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 H PEHPLLQ+L Y AE L ERR LPP+ + ++RAE H FL Sbjct: 591 HLPEHPLLQSLARGDYRPPAEALLNERRAAGLPPFAALTLLRAEAHQRYRVDTFLSAACQ 650 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 + P E + GP+P+L +R G R ++ +Q P+R ++Q +N L + + + Sbjct: 651 CV--PPALVE---ISGPLPSLMERRAGFERAELWVQAPNRTQMQKALNLWLPQLAGLSSA 705 Query: 719 RKVKWVLDVDPI 730 R V+W LDVDP+ Sbjct: 706 RHVRWTLDVDPL 717 >UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FF05_ACIAD Length = 743 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 322/734 (43%), Positives = 455/734 (61%), Gaps = 17/734 (2%) Query: 6 VALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN---EL 60 VA+PV L TFDY + + +AG RV V FG+Q IG V++ A +LP++ +L Sbjct: 17 VAVPVHLYDTFDYSVSQQQYEQAQAGARVLVSFGRQ-SLIG-VITEKLAPDLPIDPRFQL 74 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + E++D P+ V LL W+A YY PIG+V+ ALP LLRQG+ + + + W Sbjct: 75 KTIRELIDQAPILDTKVLTLLTWSAHYYQFPIGEVIQTALPSLLRQGK-SQDVLTYIWKI 133 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKI-WRDQVATLE-FNDAALQALRKKGLCDLAS 178 T +A + LKRS KQ A L+ + + L A L+AL KK L Sbjct: 134 TAHPEAE--SKLKRSQKQYDAYQILKLHPTGTTETILNLSGVETATLRALAKKELVACTQ 191 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 E +F+ A L N +Q A+ + + + A+LL G+TGSGKTEVYL ++ Sbjct: 192 EIQDFTPMPVQLAQMP--LTPNPDQHNAIQRVLKSLHHYQAFLLDGLTGSGKTEVYLQIM 249 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 VL QGKQ LV+VPEIGLTPQTI+RF+ RF+ V +LHSGLNDS+RL AW +AK G+A+ Sbjct: 250 HEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALLHSGLNDSKRLQAWQQAKMGKAS 309 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR + EQ P+ILGSAT Sbjct: 310 IILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGYLEQCPVILGSAT 369 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P++++ V+Q K LL+L +RAG A H++DLK K GL+ LI +++ L Sbjct: 370 PSIDSYHLVEQNKLELLQLNQRAGVALLPKMHLIDLKVAKKNEGLSQILIDQIQHTLDRQ 429 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQCP 477 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P CP Sbjct: 430 EQVLIFLNRRGYAPVLVCESCGWQANCPNCDAHFTLHTQPYGYLHCHHCGTIHRLPETCP 489 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C L +G+GT ++E+ L LFP + R+DRD+TSR G+ ++ + IL+ Sbjct: 490 ECHHHTLKTLGMGTAKVEEHLKTLFPEHDVIRVDRDSTSRVGSWQKIYDRIQHNKPMILL 549 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V +Q Sbjct: 550 GTQMLAKGHHFPYVTLVAILDIDAGLLSVDVRAPERTAQLIVQVAGRAGRGEHKGHVYMQ 609 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T P+HP+L TL+ K Y A A+ L ER+ +LPP+ V++R E + ++ FLQ++ Sbjct: 610 TLRPDHPMLTTLIEKDYRAVAKDMLEERKAARLPPYRYSVLIRCESRDRDYSQAFLQEIA 669 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 ++ A + + + GP+PA ++ GR+R +++ R RL + A + +P Sbjct: 670 QMLQHQ--AGDSIEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRPWWAEVIQLPR 727 Query: 718 SRKVKWVLDVDPIE 731 +++ +DVDP E Sbjct: 728 QHQLRLSIDVDPQE 741 >UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYX5_HALNC Length = 774 Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust. Identities = 330/733 (45%), Positives = 449/733 (61%), Gaps = 16/733 (2%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 VALP PL F Y +P ++ +AG RV VP GK Q R+G++ S ++ + +K V+ Sbjct: 50 QVALPGPLQMLFTYGVPADVSARAGMRVWVPLGKGQ-RMGVLWSPAEKETEWV--IKPVL 106 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 VLD EP+ + L WAADYYH P+G+ + AL LRQGR W G Sbjct: 107 SVLDDEPLLDEELLACLGWAADYYHFPLGETVLAALAPSLRQGRSLHELA---WRILPSG 163 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 + + R +Q+ L + Q + +F A L GL + E S Sbjct: 164 EQALADGTLRGARQRALLERIAQTPQGVSESQLRDFPKAVRLRLADLGLIE-PFEQMMPS 222 Query: 185 DWRTNYAVSGERL---RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 W +SG +L LN Q+ AV A+ + + F WLL GVTGSGKTEVYL+++ V Sbjct: 223 TWPVLAEMSGNKLPAPDLNEAQSAAVSAVAACLENFGVWLLEGVTGSGKTEVYLNLISRV 282 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 LAQG+Q L++VPEI LTPQ + RF +R VLHSGLND +RL+AWL A++G+A +VI Sbjct: 283 LAQGRQVLILVPEIALTPQLVTRFTDRLGLVPAVLHSGLNDGDRLNAWLAARSGDATVVI 342 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F PF +LG+IV+DEEHD S+KQ EG+ YHARD+A++RA +PI+LGSATP+L Sbjct: 343 GTRSAVFQPFADLGLIVVDEEHDGSFKQSEGFGYHARDVAIWRARRLGVPIMLGSATPSL 402 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 E+L NV +Y LL L RAG A +LD++ Q+++ GL+ L+ + HL A QV Sbjct: 403 ESLRNVSLSRYHLLTLPERAGGAAMPDIRLLDVRQQRMRGGLSDDLVAAIETHLLAGGQV 462 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 +L+LNRRG+A LLCH CGW+AEC CD + T H+ + LRCHHC +R P CP+C + Sbjct: 463 MLYLNRRGYASNLLCHACGWVAECAHCDSFMTWHRGVNRLRCHHCGFERQPPSVCPNCSA 522 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 T L P GLGTEQLE L LFPG I R+DRD SR G L+++LA + AR+++GTQ+ Sbjct: 523 T-LSPRGLGTEQLEDVLTGLFPGFGIERLDRDALSRVGELDRRLARIQSSEARLIVGTQI 581 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 L KGH FP V+LVA++D D ALF+ DFR AERFAQ QVAGRAGRA + G V++QTH P Sbjct: 582 LVKGHDFPHVSLVAVVDADQALFANDFRGAERFAQQLIQVAGRAGRASRAGTVLVQTHQP 641 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI- 660 EH L L++ GY +FA+ LAER LPP + ++RA+ + L + + + Sbjct: 642 EHVGLNRLIHAGYASFAQTLLAERAEAGLPPVRAAAMIRADARDADAPRELLTHMADWLH 701 Query: 661 --LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 L+ P AD L V GPVPA +R GR+R+Q+L+ R RL H L + Sbjct: 702 EHLADP-ADSPLDVWGPVPAPLARRAGRYRYQLLILADDRPRL-HAALSQLESWQGTRRT 759 Query: 719 RKVKWVLDVDPIE 731 + ++W +DVDP++ Sbjct: 760 KGIRWSIDVDPVD 772 >UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHU2_9BACT Length = 736 Score = 580 bits (1495), Expect = e-164, Method: Compositional matrix adjust. Identities = 302/729 (41%), Positives = 438/729 (60%), Gaps = 7/729 (0%) Query: 6 VALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V +PVPL F Y +P+G K G R++VPFG + IGI + SD+S+ K Sbjct: 8 VLVPVPLLEKFTYKVPKGYQKRKFKRGVRLKVPFGNRI-LIGIFWNYSDSSKPKRASYKL 66 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + E+LD + + ++ L W++ YYH+P+G+V+ + P LR+G+ A YW T+ Sbjct: 67 IKEILDEDTLLDKALLDLADWSSRYYHYPLGEVITYFFPPSLRKGKEARFKESTYWKVTD 126 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 +G DL LKR+P Q++ L LR+ G + + + + L L KK L S Sbjct: 127 KGDFFDLAELKRAPSQREGLELLRENGDLSQKSLRAYGISSVTLNNLYKKELIQKISLEQ 186 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + A+ + +L EQ +V AI +LL GVTGSGKTEVYL + + Sbjct: 187 LPVNSHQTEAI--DEKKLTPEQNISVQAISGEFGNDKTFLLNGVTGSGKTEVYLRCIRKL 244 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 + QGKQALV++PEIGL PQ RF+E F V HS N+ ERL WL A+ G IVI Sbjct: 245 VDQGKQALVLIPEIGLAPQAERRFKELFGDRVASFHSAKNERERLDVWLGAQRGLYDIVI 304 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRS++F P KNLG+IV+DEEHD+S+KQ E +RY ARD+A+YRA +IP +L SATP++ Sbjct: 305 GTRSSVFIPMKNLGMIVVDEEHDASFKQTERFRYSARDIALYRAKLSKIPTLLASATPSV 364 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 E++ N KY+LL L +RA A LDLKG+ ++ G + L+ + L +NQV Sbjct: 365 ESMSNALNGKYQLLTLKQRATGADLPSFVPLDLKGKTLKEGFSEKLLEEIESELNKNNQV 424 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 ++FLNRRGFA +++C CGWI+ C RCD + T+H HL+CHHC++++P+ CPSC Sbjct: 425 LIFLNRRGFACSMICKSCGWISHCDRCDAHMTVHSNPSHLQCHHCENKKPLFTICPSCQH 484 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 G+GTE++E L F P+ RID D+T +K + + L + G IL+GTQM Sbjct: 485 NEFESYGIGTERIEGYLKKKFRQFPVLRIDSDSTRQKDSFKNYLKIIDEGKPLILVGTQM 544 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 LAKGHHFP+VTLV +LD D +FSADFR +ER AQL TQV+GRAGR K G+V+LQT+ Sbjct: 545 LAKGHHFPEVTLVGILDADSGIFSADFRGSERVAQLITQVSGRAGREKKPGKVILQTYCQ 604 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 EHP ++ LL Y+ F ++ + +R + PP++ V ++AE N + FL + + Sbjct: 605 EHPQIEELLKGDYETFIKKIIEDRASTKSPPFSFQVKLQAESFNGLLSRDFLSSCLDYLN 664 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 S L ++ + +GP+P+L K+ G +RW++ L SR L + + + + +RKV Sbjct: 665 KSQLMNKDIKTIGPLPSLMEKKSGVYRWEVSLFSSSRKSLHSLTDHLQSYLYLPKQTRKV 724 Query: 722 KWVLDVDPI 730 +W +DVDPI Sbjct: 725 RWSIDVDPI 733 >UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8L5_9GAMM Length = 730 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 309/734 (42%), Positives = 447/734 (60%), Gaps = 23/734 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V VA PVPL R FDYL PE ++ G R+RVPFGK+ E I++ V+ + + + Sbjct: 9 VLRVAAPVPLRRPFDYLAPESQNPDRLRPGIRLRVPFGKR-EITAILLEVAAEASVNAEQ 67 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ ++VLD +P+ T + L W++DYY HP+G+V A+P LR+GR + +W Sbjct: 68 LRPALDVLDDKPLLTPGIMALCKWSSDYYQHPVGEVFSAAIPKALREGRGLSET---HWR 124 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL---CDL 176 T +G+ + +L R+ Q +ALA L+ G+ + + + A L+ L KGL C + Sbjct: 125 LTTEGKGLPEGALSRAKSQAKALALLQTGEQLPEVLKNAGISGAVLRELTAKGLVERCRI 184 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 + P + A+ L+ EQ +AV A+ D+FS LL GVTGSGKTEVYL Sbjct: 185 TTSLP-------SAALKENGPPLSEEQGSAVAAVE--WDSFSCHLLQGVTGSGKTEVYLR 235 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 ++ L +G+QALV++PEIGLTPQT+ RF RF +PV VLHSGL+D +R +AW A++G Sbjct: 236 LIAACLDRGEQALVLIPEIGLTPQTVKRFEARFQSPVAVLHSGLSDGQRFAAWQAAQSGT 295 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+GTRSA+FTP G+I++DEEHD SYKQQ+G+RY ARD+AV RA E P++LGS Sbjct: 296 AGIVMGTRSAIFTPLARPGLIIVDEEHDGSYKQQDGFRYAARDVAVKRAQLEGCPVMLGS 355 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N ++++YR L R G + +DL+G ++ AG++ L+ +R+ ++ Sbjct: 356 ATPSLESLENARRERYRHHFLRGRQGGGELPMLQTVDLRGLQLNAGISDYLMAAIRETVE 415 Query: 417 ADN-QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 A Q +LFLNRRGFAP L CH CGW+A C CD T+H + LRCHHC +QR +P Q Sbjct: 416 AQKRQALLFLNRRGFAPTLQCHSCGWVAGCDHCDARLTVHLRKRCLRCHHCAAQRALPAQ 475 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP CG T L+ GLGTEQ E+ L + P+ R+D D A++ L H + Sbjct: 476 CPDCGGTALLTHGLGTEQTEEFLRNVL-SCPVHRVDSDAMRGVDAMQSLLEVAHSEEPCV 534 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 ++GTQML KGHHFP V LV ++D D L+SADFR ER AQL QVAGRAGR G+V+ Sbjct: 535 ILGTQMLTKGHHFPAVQLVGVIDADALLYSADFRGEERMAQLVVQVAGRAGRESAGGKVL 594 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QTH+P+ PL + L + +++ L +RR LPP+ +++R++ N + FL+ Sbjct: 595 IQTHYPDDPLFEALRHGHFESITRSLLDKRRASGLPPYGQLMLLRSDARNERDGEAFLRA 654 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 ++ + D +L +GP+P+ P+R GR+RWQ+ SR + + Sbjct: 655 VQKEVTGFLPPDCQL--IGPLPSAMPRRAGRFRWQLWCLSASRGSAMAAARLLVERAEGL 712 Query: 716 PDSRKVKWVLDVDP 729 SR++ W +DVDP Sbjct: 713 RKSRELSWFIDVDP 726 >UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae RepID=B2IAA9_XYLF2 Length = 733 Score = 578 bits (1490), Expect = e-163, Method: Compositional matrix adjust. Identities = 322/743 (43%), Positives = 444/743 (59%), Gaps = 30/743 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV---KAGCRVRVPFGKQQERIGIVVSVSDAS-ELPLN 58 + VALP+PLP+ FDYL P G+ + GCRVRVPFGK+ E IG+VV + A +PL Sbjct: 5 ILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKR-ELIGVVVELPSAEMSVPLR 63 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA-PMWY 117 E A + D P+ + + L W + Y H P+G++L ALP LLR G+P W Sbjct: 64 EAFAWI---DRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWTCWA 120 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT-LEFNDAALQALRKKGLCD- 175 W TE G+ L+R+ + Q L D + T + A L K+G + Sbjct: 121 WRLTETGRTAA-PKLRRNSRSAQMAELLTASDQTEDALNTRMNRWRAVAHNLTKRGYVER 179 Query: 176 --LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + P +N LNTEQ AV +++ F +LL GVTGSGKTEV Sbjct: 180 IKKPTTVPVIIQTTSNTVPV-----LNTEQQKAVETLNANVG-FKTYLLDGVTGSGKTEV 233 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL + LA KQALV+VPEIGLTPQ + F R PV LHS L DSER W A+ Sbjct: 234 YLQAIATCLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATAR 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GEA +V+GTRSA+FTP N G+I++DEEHD+SYKQQ+G RY+ARD A+ R + +P+I Sbjct: 294 CGEARLVLGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNVPVI 353 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQ 413 LGSATP+LE+L N +Y+ LRL+ RAG A VLD++ + ++ GL+P ++T + Sbjct: 354 LGSATPSLESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINA 413 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD---HY--YTLHQAQHHLRCHHCDS 468 L D QV++F NR G++P LLCHDCGW A C +C H+ T++ +L+CHHC + Sbjct: 414 TLARDEQVLVFKNRCGYSPVLLCHDCGWTATCHQCSTSVHHTPMTVYSGGTYLQCHHCGA 473 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 ++P+P CP CGST L P G+GTE+LE L FP P+ RIDR+TT + L+ Q ++ Sbjct: 474 RQPMPLSCPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKL 533 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 A IL+GTQ+LAKGHH P +T+V ++ +D LFSADFR+ E+ +Q QVAGRAGRA Sbjct: 534 G-NAAGILVGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRA 592 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 GEV LQTHHP+HPLLQTL+ GY FA L +R+ LPP+ ++RAE + Sbjct: 593 KHAGEVWLQTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDTTS 652 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 FL +R + + + + GP+ A P+R G R+Q+LL R L +N Sbjct: 653 TQQFLTTIRKHMPT----NNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNVL 708 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 + I+ +P++R+V+W LDVDP++ Sbjct: 709 IPAIHALPEARRVRWSLDVDPVD 731 >UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCN0_LEGLO Length = 753 Score = 571 bits (1472), Expect = e-161, Method: Compositional matrix adjust. Identities = 309/736 (41%), Positives = 444/736 (60%), Gaps = 23/736 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY+ E G RV VPF ++Q R+G+V+S+ +A + + LK Sbjct: 32 VYQVCIPNTNRDCFDYIADEFAPC-IGARVWVPF-RKQTRLGVVISLKEAVQDSV-LLKT 88 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM--WYWFA 120 + V+D EP+ + L LW A YY P+ +VL ALP R G PM +Y A Sbjct: 89 ISAVIDKEPLLDEKILTLCLWIASYYQSPLSEVLPLALPKKYRLGE-VCQLPMSDFYQLA 147 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE-----FNDAALQALRKKGLCD 175 +A N R+ KQ + + L I ++ VA + FN + L L + Sbjct: 148 LPLDEAKK-NIPARAHKQLKLIEFL---SIQKEPVAQRDLIQKGFNHSQLGHLVATQVLS 203 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 L+ + ++ S L LN+EQA AV I F +LL GVTGSGKTEVYL Sbjct: 204 LSQKIIFPQRAEISHIPS---LTLNSEQAVAVATIKEKLSHFQCFLLQGVTGSGKTEVYL 260 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 V+ VL QGKQ LV+VPEIGLTPQ +ARF RF P+ V+HSGLN+SER AW AK Sbjct: 261 QVIAEVLEQGKQVLVLVPEIGLTPQLVARFTARFKQPIAVIHSGLNESERQVAWQLAKEN 320 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + +VIGTR+++FTP LG+IV+DEEHD S KQ EG RY ARD A+ RA+ IPIILG Sbjct: 321 KVKVVIGTRASIFTPMPALGLIVVDEEHDPSLKQMEGVRYSARDTALMRANLANIPIILG 380 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP+LE++ N +Q+KY+LLRLT +A + P ++DL+ Q VQ GLA + +++HL Sbjct: 381 SATPSLESIYNCKQQKYKLLRLTHKALSTTPLHYQLIDLRSQVVQHGLATPTLHVIQEHL 440 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + NQV++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + P Sbjct: 441 KKKNQVLVFINRRGFAPVLLCHQCGWMVDCRACDSHLTLHKQIGQMICHHCGLTQKKPEY 500 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C +C T L+PVG GT+++ + L FP + + RIDRD +K ++++ L ++H G A++ Sbjct: 501 CSNCQGTELMPVGAGTQRIHEFLGLHFPHIEVMRIDRDAVRKKNSMDEHLDKIHSGEAQL 560 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 ++GTQMLAKGHHFP ++LV +LD D L++ DFR+ E QL TQV+GRAGRA G V+ Sbjct: 561 IVGTQMLAKGHHFPRLSLVVVLDADAGLYNQDFRALEHLGQLLTQVSGRAGRADSAGHVL 620 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QTH P+HPLL L+ +GYD+FA+ L R+ ++PP+ ++RA+ + FL Sbjct: 621 IQTHMPDHPLLNLLIQQGYDSFADFLLTMRQQAEMPPFYFLAVIRAQGKAATNVAKFLHA 680 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 ++ I + + V+GP PA P++ ++R Q+L++ SR L++ + + Sbjct: 681 VKEQIKT-----HSIIVMGPAPAPMPRKANQYRMQLLIKSASRKALKYALTQLREWLTKN 735 Query: 716 PDSRKVKWVLDVDPIE 731 S ++W +DVDP++ Sbjct: 736 KLSNGIRWNVDVDPVD 751 >UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z8I4_9GAMM Length = 735 Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust. Identities = 307/733 (41%), Positives = 435/733 (59%), Gaps = 20/733 (2%) Query: 6 VALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 A+P+P+ DYL +G AG R+ +P G +Q +G+V + + + +LK Sbjct: 14 CAVPIPVRGYLDYLPVKGGNAVPVAGGRILIPLGSRQ-LVGVVTEILGFTAISPEKLKCA 72 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 LD P+ V LL W ADYY HP G+ L L R+G P A+ + T + Sbjct: 73 KAYLDDTPLIDSIVLELLGWTADYYQHPPGETLILGLSPRERRGEPPASTHEAGFSLTIR 132 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD----LASE 179 G+ + +L R+P+QQ +AALR G R ++ + F L+AL + L + LA++ Sbjct: 133 GEGLSDAALSRAPRQQALIAALRAGPKTRAELRAIGFKPDNLRALITRSLIEPMAMLANK 192 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 T W L N EQ+ A+ I+++ FS LL GVTGSGKTEVYL + Sbjct: 193 T-----WSCRAP-----LPANNEQSLAITHINASLGEFSCHLLEGVTGSGKTEVYLQAIA 242 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 LA+ +Q LV++PEIGLTPQ + RF ERF+AP+ LHSGL ++ER W A++G+AAI Sbjct: 243 AALARQEQTLVLIPEIGLTPQLVRRFNERFDAPIVTLHSGLGNAERDRNWQAARSGQAAI 302 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 +IGTRSA+F P G+I++DEEHD S QQ+G RY ARD+AV RA PI+LGSATP Sbjct: 303 IIGTRSAVFAPMLTPGLIIVDEEHDVSLSQQDGLRYSARDVAVKRAQLSGCPIVLGSATP 362 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE++ N +YR RLT+RA A P +H++D++G ++AGL+P L ++M + L Sbjct: 363 SLESMANATNARYRWHRLTQRAAGASPPTKHIVDIRGLALRAGLSPQLQSKMTEVLSRGE 422 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QV+LFLNRRGFAP LLCHDCGW AEC CD TLH+ ++CHHC Q P+P++CP C Sbjct: 423 QVLLFLNRRGFAPTLLCHDCGWTAECQNCDARQTLHKKPPRVQCHHCGQQSPLPKRCPEC 482 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 LV GLGTEQ EQ L FP +P+ R+D D+ S + A+ V + GA I++GT Sbjct: 483 QGHRLVASGLGTEQTEQALRKDFPEIPVHRVDSDSMSGRHAMATFTQAVEQTGACIMLGT 542 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 Q+LAKGHHFP VT V +LD D L S DFR ER AQL TQV GRAGRA + GEV++QT Sbjct: 543 QLLAKGHHFPKVTCVGILDADSLLMSPDFRGEERLAQLLTQVGGRAGRAQQPGEVIVQTR 602 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ-LRN 658 HPEHP++ +L K + A + Q L R+ LPP + +R + + + FL + Sbjct: 603 HPEHPIITAVLEKSWRALSAQLLLSRKAQGLPPNGALAALRCDSASAESGAAFLLAIMEK 662 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 ++P + + ++GP+ A +R G +R I++ R ++ + +AL + Sbjct: 663 YHRTTP--NPSIRLVGPLSAPMARRAGLYRSHIVITGAQRSKVHASVKILVALASEHRIP 720 Query: 719 RKVKWVLDVDPIE 731 ++W +D+DP E Sbjct: 721 TGLRWFVDIDPSE 733 >UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea blandensis MED297 RepID=A4BGC2_9GAMM Length = 730 Score = 567 bits (1462), Expect = e-160, Method: Compositional matrix adjust. Identities = 323/729 (44%), Positives = 432/729 (59%), Gaps = 17/729 (2%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 VA+P P Y + V GCRV VP GK+ IG+VV +L + +L+AV Sbjct: 14 VAVPGPFSTPLTYACSK--PVAPGCRVEVPLGKRSV-IGVVVEQRPDEQLDMAKLRAVER 70 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA-TEQG 124 +LD PV + L W + YY H ALP LLR+G AA P W T G Sbjct: 71 ILDDTPVLPTDILALAEWMSRYYLHEFASPYLLALPGLLRKGE-AATLPTETWLNLTVAG 129 Query: 125 QAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 +A+D LKRS + Q + L+Q G++ + F QAL KK L L ET + Sbjct: 130 EAIDPAQLKRSTQHQAIMTQLQQSGRLPWSHLRAQGFTRPQAQALEKKQLLSL-DETCDN 188 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 ++ L LN EQ+ A+ + A F+ +LL G+TGSGKTEVYL +E L+ Sbjct: 189 DPIPPTGQLAEPSLTLNDEQSAALDQVSEA--RFAPFLLEGITGSGKTEVYLQAIERCLS 246 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 +G +ALV++PEIGLTPQT+ARF RF +LHSGL D +R AWL+A +G+AAIVIGT Sbjct: 247 RGHRALVLIPEIGLTPQTVARFERRFRDRCVILHSGLTDKQRTLAWLQANHGQAAIVIGT 306 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+ TP +LG+IVIDEEHD+S+KQQ+ RY ARD+A+ RA IPIILG+ATP+LET Sbjct: 307 RSAVLTPIPDLGLIVIDEEHDASFKQQDTLRYQARDVALKRAQLADIPIILGTATPSLET 366 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVIL 423 L N ++ L+L RAG AR ++D++ Q+ Q GL+ L+ R+R+HL NQV+L Sbjct: 367 LHNALTGRFGHLQLKERAGGARLPTIELIDMRRQQQQHGLSERLLIRIREHLNDGNQVLL 426 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 FLNRRGFAP+ CH CGWIA+C CD + T H H CHHC + P P CP C S Sbjct: 427 FLNRRGFAPSWFCHSCGWIADCVFCDAHLTYHHHGHINICHHCGHREPPPTVCPDCHSRD 486 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 L +G GTE+ EQ L F VPI R DRD S + EQQL + G I++GTQMLA Sbjct: 487 LSAMGTGTERAEQLLESAFADVPIIRFDRDVASTRLKFEQQLEKTAEDGPAIIVGTQMLA 546 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGHHF VTLV + D DG LFSAD R+ ER QL TQVAGR+GR + GEV++QT++P++ Sbjct: 547 KGHHFHRVTLVGVWDSDGGLFSADLRAKERMGQLLTQVAGRSGRGERTGEVLIQTYYPDN 606 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 P+ Q L Y +FA L ERR +LPP+ +VRA+ + A L + + +L Sbjct: 607 PIFQPLTEHDYRSFAFSLLEERRKTRLPPFGFVAVVRADSAFAERAEELLATMTSYLLEH 666 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP-DSRKVK 722 + VLGP+PAL +R G+ R+ +++Q R L + + L P +R+V Sbjct: 667 ----HAVRVLGPLPALLSRRAGKHRFMLIIQADRRSALHEAL---VPLHRHYPRQTRQVS 719 Query: 723 WVLDVDPIE 731 W +D+DP + Sbjct: 720 WHIDIDPAD 728 >UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Psychrobacter RepID=Q1Q969_PSYCK Length = 793 Score = 565 bits (1457), Expect = e-159, Method: Compositional matrix adjust. Identities = 328/775 (42%), Positives = 456/775 (58%), Gaps = 56/775 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV--------------KAGCRVRVPFGKQQERIGIVVS 48 + VALPVPL R FDY LP ++ + G RV V FG+Q IGIVV+ Sbjct: 26 LVQVALPVPLYRVFDYSLPSDISALPNASPNNSSIQLPQIGSRVEVSFGRQ-TLIGIVVA 84 Query: 49 -VSDA-SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ 106 ++ A + +PLN+LK + + LD+E + +S+ +L W A YYH+P+G+VL LP L+RQ Sbjct: 85 HIAQADTSVPLNKLKPINKCLDAESILDNSLLKLAYWLARYYHYPLGEVLAVILPTLVRQ 144 Query: 107 GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE-FNDAAL 165 G+P + + +W D + + KQQ + L + V LE A L Sbjct: 145 GKPL-DLLITHWRILPHITDDDFRTNAKKQKQQFDMLKLHGQHGASEDVLLLEGMERAFL 203 Query: 166 QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLA 223 + L KGL + + + T+ ++ L LN EQ AV AI +A ++ ++ +LL Sbjct: 204 KTLEDKGLIERYIQPKQAP---TSVKLAKMPLDLNEEQQLAVAAIVAAHESKCYTGFLLN 260 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 G+TGSGKTEVYL ++ VL GKQ L++VPEIGLTPQT ARF RF A + +LHSG+N++ Sbjct: 261 GITGSGKTEVYLQAMQAVLEAGKQVLILVPEIGLTPQTRARFASRFAAHIVLLHSGMNNT 320 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 RL W + G A I+IGTRSA+ PF +LG+IV+DE HD SYKQQ+ RYHA D+A+Y Sbjct: 321 HRLQGWQDCRTGHAQIIIGTRSAVLYPFADLGLIVVDEAHDGSYKQQDTLRYHAADVALY 380 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-------- 395 R +IP++LG+ATP+LE L V + K +L+ R GNA+PA ++D + Sbjct: 381 RGFQAKIPVVLGTATPSLEHLKLVDEGKLVECQLSTRPGNAKPAPMQLIDARLQSTHQQT 440 Query: 396 ---GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 G + GL ALI +RQ L+A +QV++FLNRRG+AP LLC CGW A+CPRCD + Sbjct: 441 QDDGARYDTGLTDALIGAIRQTLEAGDQVLIFLNRRGYAPVLLCEACGWQADCPRCDAHL 500 Query: 453 TLH---QAQH-------HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 T+H QAQ +L+CHHCD Q +P CP CGS +L G+GT +L + L +F Sbjct: 501 TVHYNNQAQRSNYSSNSYLKCHHCDWQAYIPTVCPDCGSQNLDAKGMGTTRLSENLHAIF 560 Query: 503 PG-------VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 PI +IDRDTT RK + E ++ G IL+GTQM+AKGHHFP+VTLV Sbjct: 561 ANPQTSKALYPIIQIDRDTTRRKDSWENIYQRINAGNPAILVGTQMVAKGHHFPNVTLVC 620 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYD 615 L + D SADFRS E AQL QVAGRAGR K G V++QT P++ LL L+ GY Sbjct: 621 LPNADRGFLSADFRSPEHTAQLMIQVAGRAGRGDKSGRVLIQTLQPDNALLLKLVKDGYL 680 Query: 616 AFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGP 675 +FA + L ER+MM LPP + ++R E + Q L++ I P L VLGP Sbjct: 681 SFARELLQERKMMGLPPHSHAALIRCE---GKTLAATTQALKDAIAVLPTG-HNLAVLGP 736 Query: 676 VPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + A K+ R+ Q+LL R +L H++N + T+P ++ +K LD+DP+ Sbjct: 737 IDAPMSKKNSRYHAQLLLLAKDRQQLHHVLNHWWQPVLTLPSAKYLKLTLDIDPV 791 >UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii RepID=B6J9B5_COXB1 Length = 662 Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust. Identities = 278/536 (51%), Positives = 370/536 (69%), Gaps = 7/536 (1%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L LN Q AV I A+ F +LLAGVTGSGKTEVYL +E ++ Q KQAL++VPEIG Sbjct: 131 LELNEYQQNAVNQI-MASKGFQTFLLAGVTGSGKTEVYLRCIEKLIQQEKQALILVPEIG 189 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LTPQT+ RFRERFN P VLHS L D +R AW+ AK G A IVIGTRSA+FTP N G+ Sbjct: 190 LTPQTLNRFRERFNVPTAVLHSSLTDKKRAQAWMMAKRGTAKIVIGTRSAIFTPLLNPGI 249 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD+S+KQQ G+RY ARDLAV R E IP++LGSATP+LE+L NV++++Y+LL Sbjct: 250 IILDEEHDTSFKQQSGFRYSARDLAVMRGQFENIPVVLGSATPSLESLYNVERRRYQLLS 309 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 L RAG A+ ++DL+ +K+ AG++ L+ + +H++ QV+LFLNRRG+AP LLC Sbjct: 310 LPGRAGKAKLPSLTIVDLRQKKLIAGMSEDLLISIEKHIKNKGQVLLFLNRRGYAPTLLC 369 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 H CGW+ C RCD TLH L CHHC + + +P CP C L+ VGLGTE+LE Sbjct: 370 HGCGWVMHCDRCDARLTLHHFPKRLYCHHCGAAKKIPPTCPQCHQQELIDVGLGTERLEA 429 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L FP I RIDRD+T K ++E +L +H A ILIGTQM+AKGHHF +TLVA+ Sbjct: 430 ALQQRFPNDDIVRIDRDSTRTKNSMENKLNLIHNREAPILIGTQMIAKGHHFSHLTLVAI 489 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 +D D L+SADFR+ ER QL TQVAGRAGR +QGEV++QTH P +P L LL +GY+A Sbjct: 490 IDADSGLYSADFRATERMGQLLTQVAGRAGRVDRQGEVLIQTHQPNNPFLTLLLQEGYEA 549 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL-FLQQLRNLILSSPLADEKLWVLGP 675 FA+ L ER++ QLPP+T ++R E Q+ PL FL +++ L+++ E++ +LGP Sbjct: 550 FAQALLKERQLAQLPPFTYLALLRTEA-VKQNLPLDFLTKIKELMVNE--LKEEVDLLGP 606 Query: 676 VPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 VPA ++ GR+R+Q+L Q R L ++N ++L+ T KV+W LD+DP E Sbjct: 607 VPAGMERKAGRYRYQLLFQSKHRKHLHSVLNKLISLLAT--QRTKVRWSLDIDPQE 660 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 45/108 (41%), Positives = 75/108 (69%), Gaps = 3/108 (2%) Query: 3 VAHVALPVPLPRTFDYL--LPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + VA+P PL ++FDYL E +++ G R++VPFG++ E +GI++ V S LPL++L Sbjct: 7 ILRVAVPSPLWQSFDYLPLNAEIQSLQPGMRLKVPFGRR-ETVGILLDVVTHSTLPLSKL 65 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 K ++E++D + S+ +L WA+DYYH+PIG+++ +LP L RQG+ Sbjct: 66 KPIIEIIDEVALIPASLLKLYCWASDYYHYPIGEIILGSLPRLFRQGK 113 >UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria RepID=C6P2J4_9PROT Length = 739 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 320/750 (42%), Positives = 455/750 (60%), Gaps = 31/750 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MP+ VAL VPL FDY++ E M ++ G RV VPF ++Q +G+ + + L ++ + Sbjct: 1 MPIIRVALDVPLSTLFDYVVSEEMRLEIGQRVVVPFRRKQA-LGVAMEWVQETALAVDRI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V +VLD P + LL + +DYYH+P+G + ALP LR P + Sbjct: 60 KPVTQVLDDVPPLPQELLALLRFCSDYYHYPLGMTVLAALPTRLRAVEPITVKQALDYTL 119 Query: 121 TEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLEFN-DAALQALRKKGLCD--- 175 + G+A+D+ +L KR QQ+ L ALR + Q+ TL + AAL++L + G + Sbjct: 120 SAAGRALDIATLPKRRVVQQRILQALRLAPLSGAQMRTLSPSAPAALKSLLEAGWVECVA 179 Query: 176 -----LASETPEFSDWRTNYAVSGERL----RLNTEQATAVGAIHSAADTFSAWLLAGVT 226 L++ P+ + RTN G L L EQ AV A+ + + +LL G+T Sbjct: 180 RKAGPLSNSLPQAGE-RTNE--KGNLLLGAHALTDEQQQAVDAV-TQQKGYGCFLLHGIT 235 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSER 285 GSGKTE+Y+ ++ +L + Q L++VPEI LTPQ FR RF + + LHSGL D ER Sbjct: 236 GSGKTEIYVHLMHEMLQRSGQILLLVPEINLTPQLENYFRSRFPDVDLVSLHSGLADGER 295 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 WLKA++G+A IV+GTR ++F P L +I++DEEHD S+KQQ+G RY ARD+A++RA Sbjct: 296 AQNWLKAQSGDARIVLGTRLSVFAPLPKLSLILVDEEHDPSFKQQDGLRYSARDVAIFRA 355 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPA---IQHVLDLKGQKVQAG 402 + +PI+LGSATP+LE+ N Q +Y+LL+LT+RA +PA + +D+ +Q G Sbjct: 356 NQRGVPIVLGSATPSLESWFNAQSGRYKLLKLTQRA--VQPATLPVVRCMDITKLPLQDG 413 Query: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 L+ L+T + LQ Q ++F+NRRG+AP L+C CGW++EC C LHQ LR Sbjct: 414 LSEPLLTAIETRLQRKEQSLIFINRRGYAPVLMCTSCGWLSECKHCAGKLVLHQKDRSLR 473 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CHHC +Q+ VP CP+CG L PVG+GT++LE+TL FP I R+DRD+T KGA Sbjct: 474 CHHCGAQQRVPNACPTCGDADLKPVGIGTQRLEETLQTRFPNARILRVDRDSTRNKGAWS 533 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER-FAQLYTQV 581 ++H G A ILIGTQMLAKGH FP++TLV ++ DGAL+SADFR++E+ FAQL TQV Sbjct: 534 AMRKQIHDGEADILIGTQMLAKGHDFPNLTLVGVISPDGALYSADFRASEKLFAQL-TQV 592 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 GRAGRA K GEV++QT P HPL Q L Y+ +A+ LAER+M PP+ ++ A Sbjct: 593 GGRAGRADKAGEVIMQTAFPNHPLFQALRAHNYEIWAQTLLAERQMAGFPPFVYQALLSA 652 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 E A FL+Q R+ + + E V G VPA PKR R Q+L+Q R L Sbjct: 653 EGKQESDAYNFLKQARSAAMELHMPVE---VYGVVPAAMPKRANHHRAQLLVQSDKRKAL 709 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + +++ +P + K++WVLDVDP+E Sbjct: 710 GEFLRAWKPILDALP-AGKLRWVLDVDPME 738 >UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=cellular organisms RepID=Q1GXV2_METFK Length = 738 Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust. Identities = 332/739 (44%), Positives = 448/739 (60%), Gaps = 23/739 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VPL FDYL V+ G RV VPFG +++ +GIVV ++DAS++ +LK+ Sbjct: 12 ILKVALDVPLDGVFDYL--SEAPVQIGQRVVVPFGPRRQ-VGIVVDLADASDVAPAKLKS 68 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA-ANAPMWYWFAT 121 +++ D EPV + LL + ADYY +P G L ALP LRQ PA A YW + Sbjct: 69 IIQYFDQEPVLDGEFFSLLKFCADYYQYPYGQALLSALPARLRQTEPARARQQFCYWLNS 128 Query: 122 EQGQAVDLNSLK-RSPKQQQALAALR-QGKIWRDQVATLEFN-DAALQALRKKGLCDLAS 178 GQA D++++ R Q++ AALR G++ ++A L L ALR++G + Sbjct: 129 A-GQAADISAIPVRQAVQRRIFAALRAHGRLNEAELAELSPGWRKGLAALRERGWIE--- 184 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 E ++ + S + LN EQ AV +I DTF WLL G+TGSGKTEVY+ +L Sbjct: 185 EEQVYAGLGSTLHASSVQPELNEEQVLAVQSILQYRDTFRPWLLHGITGSGKTEVYIRLL 244 Query: 239 ENVLAQGK-QALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGE 296 + VL + QALV+VPEI LTPQ ARFR R P+ LHS L++SERL W A+ G Sbjct: 245 QAVLEGNQDQALVLVPEINLTPQLEARFRTRLPQFPLVTLHSNLSESERLQNWRLAQTGA 304 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IVIGTR ++FTP L +++DEEHD+SYKQQ+G RYHARD+A+ RA IPI+LGS Sbjct: 305 ARIVIGTRLSVFTPLPGLKFMIVDEEHDTSYKQQDGMRYHARDVALVRAQRRNIPIVLGS 364 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAGLAPALITRMRQHL 415 ATPALET N + +Y LL L +RA + Q + +D+ ++Q GL+P L+ ++ L Sbjct: 365 ATPALETWHNARNGRYGLLTLQQRAVSQSQLPQVNCVDVSRVQMQEGLSPQLLKALKVRL 424 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q +LF+NRRG+AP LLC+ C WIA C RC +H Q LRCHHC ++ + RQ Sbjct: 425 ERGEQSLLFINRRGYAPVLLCNACHWIAPCMRCSSRLVVHLRQGFLRCHHCGHEQNIVRQ 484 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CPSCG+ L P G GT++LE+TL L P + R+DRD+T RK AL + L+ VH G I Sbjct: 485 CPSCGNADLHPTGNGTQRLEETLTRLLPEARVLRVDRDSTRRKHALSEMLSAVHVGEVDI 544 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER-FAQLYTQVAGRAGRAGKQGEV 594 L+GTQMLAKGH FP++TLV +LD D ALFS DFR+AER FAQL QVAGRAGRA K GEV Sbjct: 545 LVGTQMLAKGHDFPNLTLVGVLDTDSALFSPDFRAAERLFAQL-MQVAGRAGRADKPGEV 603 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL--F 652 ++QT PEH L L + + A+A L ER + Q PP +++AE N++ P+ F Sbjct: 604 LIQTSFPEHQLFNALRVQDFAAYAASLLQEREVAQFPPCEFLALIKAE--ANEYGPVQRF 661 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 LQ + S+ V PV + G R Q+L Q +R LQ ++ + Sbjct: 662 LQFAAD---SARALGTDALVYDPVRPQMERLKGMERGQLLFQAATRQTLQIVLRQLTPQL 718 Query: 713 NTIPDSRKVKWVLDVDPIE 731 P S K++W +DVDP E Sbjct: 719 RAHPLSNKIRWAVDVDPQE 737 >UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4 Tax=Legionella pneumophila RepID=A5II38_LEGPC Length = 725 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 306/736 (41%), Positives = 432/736 (58%), Gaps = 23/736 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + V +P FDY + +T G RV VPF + Q R+GIV++ + + LK Sbjct: 4 IYQVCIPHTNRDCFDYEALD-LTPCIGGRVWVPF-RNQARVGIVINKVCGQQTG-HSLKK 60 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA-NAPMWYWFAT 121 + ++D +P+ + L LW YY P+ +V+ +P R G P + +Y Sbjct: 61 ITSIIDEKPLVPEDLLELCLWVGSYYQSPLSEVIPLVIPKKYRLGLPCSLPTEDFYQLNI 120 Query: 122 EQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 +A L S K++ KQ + + L Q I + + +N + AL LA + Sbjct: 121 PVEKAKTLIS-KKAKKQHELIDFLSRHQKGISKQTLKQHGYNGTQIAAL-------LACQ 172 Query: 180 TPEFSDWRTNYAVSGERLR----LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 S E+L LN EQA AV +I + +LL GVTGSGKTEVYL Sbjct: 173 AINLSQQVILPTKIPEKLSPPLALNPEQAVAVASIFEHIHHYQCFLLQGVTGSGKTEVYL 232 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 V+ +L QGKQ LV+VPEIGLTPQ ++RF RFN P+ VLHS LN+SER AW AK Sbjct: 233 HVIAKILEQGKQVLVLVPEIGLTPQLLSRFTARFNHPITVLHSNLNESERQIAWQLAKEN 292 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + +VIGTRSA+FTP NLG+I+IDEEHDSS KQ EG RY ARD A+ RAH IPIILG Sbjct: 293 KVKMVIGTRSAVFTPLPNLGLIIIDEEHDSSLKQMEGVRYSARDTALMRAHLANIPIILG 352 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 +ATP+LET+ N +QKKY LLRLT +A + P ++DL+ Q VQ GLA + + HL Sbjct: 353 TATPSLETIHNCKQKKYNLLRLTHKAASTTPLHYQLIDLRSQMVQHGLALPTLKIIENHL 412 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 NQV++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + +P Sbjct: 413 LQQNQVLVFINRRGFAPVLLCHQCGWMVDCKACDSHLTLHKQAGQMICHHCGLTQRIPLF 472 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C +C S L+PVG GT+++ + L+ FP + RIDRD +K +L L ++++G A++ Sbjct: 473 CNNCQSKELIPVGSGTQRIYEFLSHQFPDTNVLRIDRDEVRKKNSLNSHLDKINKGEAQL 532 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 +IGTQMLAKGHHFP ++LV ++D D ++ DFR+ E QL TQV+GRAGRA G+V+ Sbjct: 533 IIGTQMLAKGHHFPRLSLVVVVDADAGFYNQDFRAIEHLGQLLTQVSGRAGRAEHAGQVL 592 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT+ P+HPLL L+ GYD FA L R+ ++PP+ ++RA+ FL+ Sbjct: 593 IQTYLPDHPLLNLLIQHGYDEFANALLISRQEAEMPPFQFLAVIRAQGKTVNKVAQFLKA 652 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 ++ I + PL VLGP PA P++ + R Q+L++ PSR L+ + + Sbjct: 653 TKDQIQAHPLK-----VLGPAPAPLPRKANQHRMQLLIKSPSRKVLKSSLTQLREWLTMN 707 Query: 716 PDSRKVKWVLDVDPIE 731 S ++W +DVDP++ Sbjct: 708 KLSNGIRWNVDVDPMD 723 >UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9P6_HAHCH Length = 746 Score = 553 bits (1426), Expect = e-156, Method: Compositional matrix adjust. Identities = 317/753 (42%), Positives = 432/753 (57%), Gaps = 38/753 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA----GCRVRVPFGKQQERIGIVVSVSDASELPLN 58 V VALPVPL R FDYL ++ G RV+VPFG++ G+++++SD SELP++ Sbjct: 6 VVTVALPVPLRRQFDYLPSHPTDLRENYPPGSRVQVPFGRR-SLTGVILAISDESELPIS 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM--- 115 LK V +VLD P+ + +L W ADYYH PIG+V+F ALP LR ANA Sbjct: 65 RLKPVAKVLDRAPLIPSVILQLCQWVADYYHAPIGEVVFAALPPPLR----TANADTDII 120 Query: 116 -----WYWFATEQG-QAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDAALQAL 168 YW AT G A + L + KQ+Q L ++ + + + L ++ L+AL Sbjct: 121 SSLQETYWGATSLGLSAGNAEHLIKGAKQKQLWGLLLKRKSMLQGDITGLGYSLTQLRAL 180 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGS 228 KGL S P E +LN EQ A+ I S D+F LL GVTGS Sbjct: 181 SAKGLIQPHSHIPGGGGAAPQII---EPPQLNQEQQEALNRISSEPDSFRTILLNGVTGS 237 Query: 229 GKTEVYLSVLENVLAQ--GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GKTEVYL+ + L+Q Q L + PEI LTPQ RF RF V HS L D ER+ Sbjct: 238 GKTEVYLAWIALALSQRPDSQFLALAPEISLTPQLRQRFALRFGDKVAAYHSALTDKERM 297 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W+ G IVIGTRSA+F PF +L I++DEEHDSS+KQQ+G RY+ARDLA+ RA Sbjct: 298 RVWINILEGRTQIVIGTRSAVFLPFNDLAGIIVDEEHDSSFKQQDGARYNARDLAILRAK 357 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPA 406 PI+LGSATP+LE+L N + +Y + L +RA NA +LD+K + + G++P Sbjct: 358 EHSCPIVLGSATPSLESLMNARGGRYESVLLRQRAVNADTPSIRLLDIKSRPLHGGISPP 417 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L+ ++QHL QV+LF+NRRGF+P L+C +CGW+AEC CD T H LRCHHC Sbjct: 418 LLEEIKQHLTEQRQVMLFINRRGFSPTLMCVECGWLAECQHCDARLTYHMKAALLRCHHC 477 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 DS +P CP C L VG GTE+ E+ L FP P+ RIDRDTT KG+L+ +L Sbjct: 478 DSTYSLPTCCPKCKQDSLKAVGAGTERTEEFLETTFPDTPVIRIDRDTTQTKGSLQDKLL 537 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 ++ I++GTQMLAKGH FP++ LV +++ D LFS+DFR+AE+ AQL QVAGRAG Sbjct: 538 QIRSNEPCIIVGTQMLAKGHDFPNLALVGIINADSGLFSSDFRAAEKTAQLLLQVAGRAG 597 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R+ +G+V++QT P HPLLQ + + Y+A E+ L R +LPP+TS ++RAE Sbjct: 598 RSAVEGKVIIQTLFPSHPLLQAIAAQDYNAICEEELHIREAGRLPPFTSMALIRAE---- 653 Query: 647 QHAPLFLQQLRNLILSSPLADE--------KLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 APL L L E ++ V GP P++ ++ R+ + L P + Sbjct: 654 --APLLEAALGGLWSLKESLLELLKFNDGLQIEVHGPFPSVMQRKQNRFHAILWLFAPQK 711 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L+ + L I +W++DVDP+E Sbjct: 712 AELRQFLKHWLRYSEGIATPSGFRWLIDVDPLE 744 >UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRF0_9GAMM Length = 724 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 333/731 (45%), Positives = 430/731 (58%), Gaps = 30/731 (4%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 VA+ PL +TF Y + G RVRVPFG+ RIGIVV E LK + Sbjct: 18 VAVFAPLRQTFSYRC-KTPPPPTGTRVRVPFGRGH-RIGIVVGY--GLEPAGTTLKDIDA 73 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP--AANAPMWYWFATEQ 123 +LD EP+ T ++ LL + A YY HP+G+V ALP LL +GRP + AP + Sbjct: 74 ILDDEPLLTPALQSLLHFGASYYQHPLGEVWATALPALLCRGRPLTSGEAPRYACNEPSP 133 Query: 124 GQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQV-ATLEFNDAALQALRKKGLCDLASETP 181 A L P+Q L LR+ G + R ++ A L AL +L +G Sbjct: 134 DAATRLG-----PRQTALLQLLREAGPLGRQELPAALR---PALPSLLARGWLRAEDAPA 185 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 D +++ L+ EQ AV A+ +A D FS +LL GVTGSGKTEVYL + Sbjct: 186 PVLDLQSSPHA------LHPEQRDAVTALRAARD-FSVFLLDGVTGSGKTEVYLETARSH 238 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L G+Q L +VPEIGLTPQ + R R RF +A V HSG ++++RL W A++G ++ Sbjct: 239 LEAGQQVLFLVPEIGLTPQLLERCRARFGSAVVASYHSGQSEAQRLRVWQGARSGRIRLI 298 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +GTRSALF P +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSATP+ Sbjct: 299 VGTRSALFLPLARPALIVVDEEHDPSFKQQSGWLYSARDLAIRRAQLESIPIVLGSATPS 358 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE+L N KYR LRL +RA +L ++ + +QAGL+ L+ Q L+A +Q Sbjct: 359 LESLHNAHIGKYRHLRLRQRATAMNLPPMTILPMRRRLLQAGLSVDLLQACTQTLEAGHQ 418 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V+LFLNRRG+APALLCHDCG CPRC T H+ LRCHHC + P QCP C Sbjct: 419 VLLFLNRRGYAPALLCHDCGSALFCPRCSAPMTWHRQAGRLRCHHCGHEEGHPHQCPQCA 478 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L PVG GTEQLE L FPGVP+ RIDRD ++ G LE LA+VH G ILIGTQ Sbjct: 479 SVDLRPVGAGTEQLEDYLGQRFPGVPVLRIDRDCITQTGQLEAVLAQVHHSGPAILIGTQ 538 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP VTLV +++VD +LFSADFR+ ER AQ QVAGRAGR G +LQ+H Sbjct: 539 MLAKGHHFPRVTLVGIVNVDQSLFSADFRATERLAQTVLQVAGRAGRGSVPGRALLQSHV 598 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHPLL L Y A A+ L ERR+ +LPP+ + ++RAE H FL Sbjct: 599 PEHPLLALLQAGDYTAIAQHLLEERRVARLPPFRALALLRAEAHRLDRVQSFLAA----- 653 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 ++ A L + GP P+L +R G R ++ L+ R LQ + L + T P+SR+ Sbjct: 654 -AAERAPSGLEISGPFPSLLERRAGFHRAELWLEAARRSELQRALKHWLPQLGTRPESRR 712 Query: 721 VKWVLDVDPIE 731 V+WV+DVDP+ Sbjct: 713 VRWVVDVDPLN 723 >UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTS9_METML Length = 752 Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust. Identities = 333/760 (43%), Positives = 443/760 (58%), Gaps = 42/760 (5%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 P+ +AL VPL R FDYL G V+ G RV VPFG++ + IGIV+ +D+SE + +LK Sbjct: 4 PILQIALDVPLARLFDYL-SAGQQVQVGQRVLVPFGRRNQ-IGIVMDEADSSEFAIEKLK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + + E V L+ ++ADYYH+P G L ALP LRQ PA + + T Sbjct: 62 PITQAFSDEVPLDAEVLSLIRFSADYYHYPFGQALLAALPARLRQVAPAVARKQYCYQIT 121 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRK--KGLCDLASE 179 + G+ VDL SL PK+Q+ L + Q + + T DA + RK K L +L Sbjct: 122 DAGRQVDLESL---PKRQRVLRLVLQA-LQAEGEQTEAVLDALSGSARKAAKELVNLGYA 177 Query: 180 TPE--FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 T E + R + + LN EQA AV +I F AWLL G+TGSGKTEVY+ + Sbjct: 178 TAEQVLAVKRVPAILQTPQPALNAEQAAAVTSITQEIQVFKAWLLHGITGSGKTEVYIRL 237 Query: 238 LENVLAQGK--------QALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSA 288 +++VL QG Q LV+VPEI LTPQ ARFR R + LHS L++SERL Sbjct: 238 MQHVLQQGADGAAQQSAQVLVLVPEINLTPQLEARFRTRLPQYNLVSLHSSLSESERLHN 297 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W A++G A I+IGTR ++FTP NL +I+IDEEHDSSYKQQ+ RYHARD+A+ RA Sbjct: 298 WQLAQSGAAQIIIGTRLSIFTPIPNLKLILIDEEHDSSYKQQDSMRYHARDVALVRAKRL 357 Query: 349 QIPIILGSATPALETLCNV-------------QQKKYRLLRLTRRAGNAR--PAIQHVLD 393 IP+++GSATPALE+ N Q KY LL L +RA +A P I +D Sbjct: 358 NIPVVMGSATPALESWYNAMGSNGQATSAASSQPNKYGLLTLKQRAVSAAQLPKID-CID 416 Query: 394 LKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 +Q GL P L+ +R L+ Q +LF+NRRG++P LLC C WIA C RC Sbjct: 417 TTKVNLQHGLTPQLVAALRLRLERKEQSLLFINRRGYSPVLLCTACHWIAPCTRCSSRLV 476 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 +H Q LRCHHC ++ +P QCPSCG L P G GT++LEQTLA L P I+R+DRD Sbjct: 477 VHLGQKKLRCHHCGHEQRIPHQCPSCGDADLHPTGHGTQRLEQTLATLLPTARIARVDRD 536 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 + SRK AL + L VH IL+GTQMLAKGH FP++TLV ++D D AL S DFR++ER Sbjct: 537 SISRKHALVEILDRVHNQEIDILVGTQMLAKGHDFPNLTLVGVIDTDSALHSPDFRASER 596 Query: 574 -FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 FAQL QVAGRAGRA K G+V++QT PEH L L + Y ++A L ER +Q PP Sbjct: 597 LFAQL-MQVAGRAGRADKAGQVIIQTAFPEHALFNALRSQDYASYANDLLQEREQVQFPP 655 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRGGRWRWQI 691 + ++RAE H+ PL +QQ L SS A +++ PV + G R I Sbjct: 656 YVFTALLRAEAHD---FPL-VQQFLQLAFSSARALSQQVVTYDPVRPQMERLKGMERGYI 711 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L+ R LQ ++ + + P + KV+W +DV+P+E Sbjct: 712 LMHAQQRPALQKLLTQLVHQLRAAPIAAKVRWAVDVNPLE 751 >UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (replication factor Y) n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B64 Length = 727 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 292/736 (39%), Positives = 431/736 (58%), Gaps = 23/736 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VPL R FDYL G K G V+V FG + +G+V ++ S L ++LK Sbjct: 7 ILKVALDVPLDRLFDYL-NNGEAFKVGQYVKVSFGSRV-LMGVVCGFANDSLLAEDKLKK 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 ++ + E +F + + RLL ++ADYYHHPIG + +P ++Q + + AT Sbjct: 65 IIHA-EPEVIFDNDLLRLLEFSADYYHHPIGQTILSIVPSRIKQHKYQLRIKEKVYKATR 123 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATLEFN-DAALQALRKKGLCDLASET 180 + + L + K + LAA G+ I + + + N A+ L G+C + E Sbjct: 124 ELTPDWIELLPKRQKNLRKLAAHLLGQPIRQSSLKNIASNAKKAILDLEIMGVC-YSEEW 182 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 E + + R LN EQ A+ ++ + F A LL GVTGSGKTEVYL ++ N Sbjct: 183 VEDESHKIDM-----RPSLNEEQQLAINSVMNEK-GFLASLLYGVTGSGKTEVYLHLIAN 236 Query: 241 VLAQGK-QALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 L + K Q LV+VPEI LTPQ +RFR RF + + VLHS L+ ERL W +AK+G+A+ Sbjct: 237 FLEEEKAQILVLVPEINLTPQLESRFRARFPDRNLVVLHSNLSSIERLDNWRQAKSGKAS 296 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I+IGTR A+FTPFKNL +I++DEEHDSS+KQQEG +YHARD+A+ RA + IPI+LG+AT Sbjct: 297 IIIGTRLAVFTPFKNLKLIIVDEEHDSSFKQQEGLKYHARDVAMVRARNNNIPIVLGTAT 356 Query: 359 PALETLCNVQQK--KYRLLRLTRRA--GNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 P+LE+ N ++ KY+LLRL RA + PAI+ L K Q ++P ++ ++Q Sbjct: 357 PSLESWLNASKEISKYQLLRLKDRAVLNASLPAIK-TTPLNSDKDQL-ISPLILKAIKQR 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 + Q ++F+NRRG++P L+C CGW A C +C +H +RCHHC + P+ Sbjct: 415 VALKQQALIFINRRGYSPVLVCSSCGWSASCHQCSARLVVHLKDKKMRCHHCSYESPIAM 474 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QC CG+ L P+G GT+++E + L P I R+DRD+ +K AL + + RG Sbjct: 475 QCQDCGNPDLYPLGSGTQKIEDRIRALIPSASILRVDRDSMRKKNALNELYEKTSRGDID 534 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGH FP +TLV +LD D AL+S DFR++ER QV+GR+GR+ GEV Sbjct: 535 ILVGTQMLAKGHDFPKLTLVVVLDADNALYSTDFRASERLFSQLMQVSGRSGRSSIAGEV 594 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT P HP+ Q + Y+ FA LAER + LPP++ +++AE A F+ Sbjct: 595 LIQTSFPNHPIFQAVKTHNYELFANSILAERASIDLPPFSFQAVLQAESRTLSLAERFMD 654 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + ++S EK+ + GPV + + G R I +Q R LQ+++ + I Sbjct: 655 DIADWAINSK---EKVNIFGPVRPVMERVSGHERINIYIQSNERKHLQNMLKVWIDQIRQ 711 Query: 715 IPDSRKVKWVLDVDPI 730 P + +VKW +D+DP+ Sbjct: 712 HPLANRVKWSVDIDPM 727 >UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6 Tax=Betaproteobacteria RepID=Q5P4Q5_AZOSE Length = 723 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 301/743 (40%), Positives = 418/743 (56%), Gaps = 33/743 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + V+LPVPLP+ FDY + G VRVPFG+ E+ G++V+++D S + L Sbjct: 1 MRIVRVSLPVPLPQLFDYTSEDATEGDVGRCVRVPFGRG-EKSGVIVAIADDSAIEAARL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAV V L+ + A YYH P+G+V+ ALP LR+ ++ Sbjct: 60 KAVRHVQREVAPLPRDWLELVAFVARYYHAPLGEVIALALPPGLRRADAVSD-------- 111 Query: 121 TEQGQAVDLNSLKRSP-----KQQQALAALRQ----GKIWRDQVATLEFNDAALQALRKK 171 E +D+ R+ + +ALA LR G + V L DA ALR+ Sbjct: 112 READPLLDVGDAGRAALAVPRRPSRALALLRDLVALGVVRHSVVRALPSGDALADALRRG 171 Query: 172 GLCDLASETPEFSDWRTNYA-VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 + + RTN A +GE +L EQ A+ A+ +A F WLL GVTGSGK Sbjct: 172 WIVPVR---------RTNPADAAGELPQLTAEQGAAIDAVLAAGPGFVPWLLQGVTGSGK 222 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAW 289 TEVYL + L G+Q L++VPEI LTPQ AR RF +A V LHSGL R + Sbjct: 223 TEVYLRLAARTLEAGRQVLMLVPEIALTPQLEARVAGRFPSATVISLHSGLAPGARSRGF 282 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 ++A G A IV+GTR A+F LG+I++DEEHD+SYKQQEG RY ARD+AV+RA Sbjct: 283 VQALEGRADIVLGTRLAVFAALPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRARQRD 342 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALI 408 +PI+LGSATP+LE+ +V+ +YR LRL+ RA + PA++ + D + ++ GL+PAL Sbjct: 343 VPIVLGSATPSLESWQHVRVGRYRGLRLSVRAVASTLPAVRRI-DTRRARLDEGLSPALQ 401 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + L+ Q ++F+NRRG+AP L C C W++ CP C +H A LRCHHC Sbjct: 402 AAIGERLERGEQSLVFINRRGYAPVLSCPSCSWVSPCPHCSANLVVHLADRRLRCHHCGC 461 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 +PR CP CG+ + P G GT+++E L LFP + R+DRD+ + E LA + Sbjct: 462 DSAIPRVCPVCGNQDIQPFGRGTQRIEARLVELFPDARVLRVDRDSARTRKQWEAMLATI 521 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A IL+GTQM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGRA Sbjct: 522 AAGEADILVGTQMMAKGHDFPRLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRA 581 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 GEV++QT +PEHPL + L+ +DAFA +AL ERR PP+T ++RA+ Sbjct: 582 HLPGEVLIQTEYPEHPLYRCLVRHDFDAFAARALDERRQAGFPPFTHQAMLRADAPALDD 641 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 A FL R L S A E L V VP + R R Q+L++ R LQ + Sbjct: 642 AMKFLAHARRLAQDS--APEGLQVFDVVPMRMTRLARRERAQLLVEAGERALLQEFVGRW 699 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 + ++ R ++W LDVDP+E Sbjct: 700 ICVLRAQRLPRDLRWQLDVDPLE 722 >UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacterium KB13 RepID=B6BVT9_9PROT Length = 725 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 284/739 (38%), Positives = 415/739 (56%), Gaps = 32/739 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VA+ VP+ FDY E + V G V VPFG ++ IGIVV V + LPLN++K Sbjct: 8 IIKVAIDVPVDDLFDYRCSEQVDV--GQFVVVPFGSRK-LIGIVVEVDVNTTLPLNKIKE 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V+ V D E +F +++L + A YY +PIG + A+P ++QG + + A+ Sbjct: 65 VIRV-DEESLFNTELFKLFRFVASYYQYPIGQTIHTAVPSRIKQGVTRGKKKNYIFNASN 123 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR--KKGLCDLASET 180 + + PK Q+ L + Q+ T N+ L+ + KK + L + Sbjct: 124 N---LSYEVIHGFPKNQKNLIKIAT------QLLTQPMNEIELKTVSNWKKHIEYLINH- 173 Query: 181 PEFSDWRTNYAVSGER------LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 D T ++ E L LN+EQ+ V I F A+L+ G+TGSGKTEVY Sbjct: 174 ----DLVTQVEITPEAPQHSAPLILNSEQSEIVEQIKKTKG-FEAFLIHGITGSGKTEVY 228 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAWLKAK 293 + ++++++ Q LVMVPEI LTPQ RF+ RF+ V LHS L+ +RL W AK Sbjct: 229 MHLIDSLIKNEGQVLVMVPEINLTPQLEDRFQSRFHTKKIVSLHSHLSQPDRLENWRLAK 288 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 +GEA IVIGTR ++FTPFKNL I++DEEHD S+KQQ+ RYHARD+ + RA IP I Sbjct: 289 SGEAQIVIGTRLSVFTPFKNLTAIMMDEEHDMSFKQQDNLRYHARDVGMMRAKLLNIPFI 348 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-GQKVQAGLAPALITRMR 412 GSATP++E +K L + N + V +K Q + L+ L ++ Sbjct: 349 AGSATPSMEIWHRAVNEKKLKLLSLTKRANEDATLPRVDLIKTSQDLDEPLSTYLKDAIQ 408 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 L QV++F+NRRGFAP L C CGW A+C RC +H+ + LRCHHCD QR + Sbjct: 409 HRLDQQQQVLIFINRRGFAPVLFCSSCGWQADCNRCSSKLVVHKNKQQLRCHHCDYQRTI 468 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 C CG+ L+ +G GT+++E+ LA LFP I R+DRDT K L+Q A++H Sbjct: 469 DSSCQECGNVDLMTLGKGTQKIEEQLARLFPLARIKRVDRDTIKNKKDLDQLYADMHDQK 528 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 IL+GTQML+KGH FP +TLV +LD D AL+S+DFR+ ER QVAGR+GRA +G Sbjct: 529 LDILVGTQMLSKGHDFPHLTLVGILDADHALYSSDFRAGERLFSQLVQVAGRSGRASIKG 588 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 EVV++T+ PEHPL + + + ++ FA++ L R+ + PP+ +++ E N ++ F Sbjct: 589 EVVIETNFPEHPLYKKIQSQDFNGFAKEELQLRKELHFPPFVMQAMLKTESKNKKYLEAF 648 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + Q + + P K+ PV + G R I +Q +R L H ++ + I Sbjct: 649 VTQCFQFMSNLP---SKVTCFPPVRPYLERLQGFERSHIYMQSNNRTELNHFLSELRSFI 705 Query: 713 NTIPDSRKVKWVLDVDPIE 731 + + S +VKWV+DVDP+E Sbjct: 706 SAMKISSRVKWVIDVDPVE 724 >UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria RepID=C4K9E5_THASP Length = 724 Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust. Identities = 291/734 (39%), Positives = 407/734 (55%), Gaps = 14/734 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VALP+PLP+ FDY + G V+VPFG+ ER G++V + + + L + Sbjct: 1 MAIVRVALPIPLPQAFDYTAADAGVGDVGRCVKVPFGRG-ERTGLIVGIGGEAGVELARI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ--GRPAANAPMWYW 118 K V+ + P L+ + A YYH P+G+V+ ALP LR+ G + Sbjct: 60 KPVLHIQRGVPALPADWLELVSFVARYYHAPLGEVVALALPPGLRRADGVSDEDEDPLLG 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 A + G+A+ A G WR V A+ L ++G ++ + Sbjct: 120 VAPKGGEALCAARRASRALALLQALAAEPGP-WRRSVIRAREGGEAVGELLRRGWLEIVA 178 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 + + +G + EQA AV AI A F WLL GVTGSGKTEVYL + Sbjct: 179 DPGARHE-------AGAQPLATPEQAAAVDAIVGAGMRFRPWLLHGVTGSGKTEVYLRLA 231 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEA 297 + LAQG+Q L++VPEI LTPQ R +RF A V LHS L D R +++A +G A Sbjct: 232 AHALAQGRQVLMLVPEIALTPQLEQRVAQRFAAANVVSLHSALADGARSRGFVQALSGRA 291 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+GTR A+F P LG+I++DEEHD+SYKQQEG RY ARD+AV+R +P++LGSA Sbjct: 292 DIVLGTRLAVFAPLPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRGRQRDVPVVLGSA 351 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+ + + ++Y L RL+RRA A +D + K+ GL+PAL + Q L+ Sbjct: 352 TPSLESWFHARSERYALQRLSRRAVAATLPAVRCIDTRRTKLDEGLSPALHVAITQRLER 411 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q ++FLNRRG+AP L C CGW++ CP C +H A LRCHHC P+P CP Sbjct: 412 GEQSLVFLNRRGYAPVLSCPSCGWVSRCPHCSANLVVHLADRRLRCHHCGCDGPIPHACP 471 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG + P G GT+++E LA LFP + R+DRD + E L + G A IL+ Sbjct: 472 SCGDQDIQPFGRGTQRIEARLAELFPQARVLRVDRDAARTRSQWETLLDTIAAGEADILV 531 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGR GEV++Q Sbjct: 532 GTQMMAKGHDFPKLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRGALPGEVLIQ 591 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T +P HPL L +DAFA AL ERR PP+T ++RA+ + A FL+ R Sbjct: 592 TEYPMHPLYLHLAKHDFDAFARMALQERRAAGFPPFTHQAMLRADAPALEDAVEFLRHAR 651 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L A +L+ PVP + R R Q+L++ R LQ + +A++ Sbjct: 652 RLAEERAPAGLRLY--DPVPMRMTRLARRERAQLLVEADHRGPLQAFLAEWVAVLYRQRT 709 Query: 718 SRKVKWVLDVDPIE 731 +R+++W LDVDP+E Sbjct: 710 ARELRWQLDVDPLE 723 >UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ1_9GAMM Length = 731 Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust. Identities = 307/734 (41%), Positives = 405/734 (55%), Gaps = 17/734 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +A VAL PL R FDY +PE ++ G RVRVPFG+ E IGIVV++++ S++P N+L+ Sbjct: 6 IAQVALDRPLDRLFDYRIPEDTDLRPGQRVRVPFGRG-EAIGIVVALANQSDVPENKLRE 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN-APMWYWFAT 121 + D++P+ T V LL + A YYHHP+G+ L ALP LR+G P AP W T Sbjct: 65 ALGSPDAQPILTPMVLELLRFGARYYHHPLGEALLSALPPALRRGHPLPILAPEPLWRLT 124 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV-----ATLEFNDAALQALRKKGLCDL 176 G R +Q L AL D+ A L+ L+ L +G + Sbjct: 125 AAGHRALAEGQVRGRRQLAILRALPALGAALDRTTLSTAAALQITAKDLRQLEARGWLEQ 184 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 P T + L EQ A+ A+ + D LL GVTGSGKTEVYL Sbjct: 185 TRADPLAPAPPTGTGYT-----LTPEQEAAIAAV--SPDDPRPMLLEGVTGSGKTEVYLR 237 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + + +A+G+Q L ++PEI LTPQ R ++RF V +LHSGL + ERL AW A+ GE Sbjct: 238 MAADAVARGRQVLFLIPEIALTPQLAGRIQQRFPGQVALLHSGLAEGERLRAWEAARQGE 297 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 IV+GTRSALF P G+I++DEEHDS++KQQ+G+RY ARDLA+ R E P++LGS Sbjct: 298 RRIVVGTRSALFVPLPEPGLIIVDEEHDSAFKQQDGFRYSARDLAIKRGQLEHTPVVLGS 357 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP LETL +Q +Y + L R +P +D + GL L+ M+Q L Sbjct: 358 ATPTLETLHAARQGRYTHVHLRSRPDGTQPPSVETIDTRVHSPDEGLTAPLLDAMQQTLA 417 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A Q + LNRRGFA L C CGW+A+CP CD + T+H CH C Q +C Sbjct: 418 AGAQCFVLLNRRGFARVLACESCGWVADCPDCDAHLTVHTQDRRAICHLCGHQERRAERC 477 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P CG L+ GLGT++LEQ LA FP PI R+DRD+ KGALE L + + A I+ Sbjct: 478 PECGEA-LINRGLGTQRLEQALARHFPQTPIIRLDRDSVRHKGALETALDRIRQLDAAIV 536 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH FP V LV ++DVD LFS D R+ E QL Q AGRAGR G V+L Sbjct: 537 VGTQMLAKGHDFPRVGLVGVIDVDQGLFSVDLRATEHTLQLIVQAAGRAGRGDGGGRVLL 596 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT HP+HPL++ L Y A E LAER LPP+ +VR E A + + Sbjct: 597 QTGHPDHPLMRGLDAGNYPAMLEPLLAEREAAGLPPYGHLALVRVEAAEAAAAHRHAETI 656 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 +L++ D L VLGP PA + R+R QILL+ R L + T Sbjct: 657 AGHLLAARHGD--LRVLGPAPAPRHRVNRRFREQILLRAAERQALHRTLTQARHAWQTED 714 Query: 717 DSRKVKWVLDVDPI 730 R V+ +DVDP+ Sbjct: 715 LPRGVRIAIDVDPV 728 >UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=uncultured marine gamma proteobacterium EBAC31A08 RepID=Q9F7S3_PRB01 Length = 662 Score = 491 bits (1265), Expect = e-137, Method: Compositional matrix adjust. Identities = 263/728 (36%), Positives = 386/728 (53%), Gaps = 77/728 (10%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASEL--PLNELKAV 63 +A+ +PL + F Y + + G RV VPFGK++ +G+V+ + +K + Sbjct: 8 IAVSLPLRQCFTY--SSELKITKGTRVSVPFGKRK-IVGVVIKNIQKPDFLKKAGAIKKI 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 + VLD P+F ++ +LW++DYYHHPIG+V +P LR Sbjct: 65 IAVLDEYPLFDKPIFDSILWSSDYYHHPIGEVFNTFIPTELR------------------ 106 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 + N+ ++ALR EF Sbjct: 107 -----------------------------------KINNKKIEALR------------EF 119 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 S++ N ++ L +Q AV A+ S + FS LL GVTGSGKTEVYL V E + Sbjct: 120 SEYSVNE--DDKKFDLTKDQEKAVKAL-SKSKGFSPTLLYGVTGSGKTEVYLRVAETFIK 176 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 K LV+VPEI LTPQ ++RF RFN + + HS ++RL WLKAK G I++GT Sbjct: 177 NNKSVLVLVPEINLTPQLLSRFENRFNGEIGIYHSKQTAAKRLKTWLKAKFGSIKIIVGT 236 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RS+ P N+G+I+IDEEHD S++Q EG+++ ARDL++ RA IPIILGSATP+L+T Sbjct: 237 RSSALVPLDNIGLIIIDEEHDQSFRQSEGFKFSARDLSIKRAQLADIPIILGSATPSLQT 296 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVIL 423 L V++ K+ + + R +P LD+ + G+A I M+ + QV++ Sbjct: 297 LKLVKENKFIRVDIPNRVDGNKPPKLIALDINNSPLIGGVAKETIEAMQSTIDRGEQVLV 356 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 F+NRRGFAP C CGW+A+C CD HQA++ L CH C+S V CP+C S Sbjct: 357 FINRRGFAPLYQCSSCGWVADCKSCDTNLVFHQARNRLICHRCESAYSVNLSCPACKSND 416 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 G GTE++E+ L F PI R+D D+T + GA+E + ++H A IL+GTQMLA Sbjct: 417 FNMYGAGTERVEEVLKSSFVKTPIIRVDHDSTKKVGAMEAIVKKIHSSDAAILVGTQMLA 476 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGH FP VTL +L+ D L S + + E+ +QL QV+GRAGR +V++QT +P+ Sbjct: 477 KGHDFPKVTLSVILNADNGLISPEINALEKISQLLIQVSGRAGRNNNLAKVIIQTRYPDD 536 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 L + Y FA Q L+ M LPP+T+ ++R + FL++ LILS+ Sbjct: 537 INLNKIKTGDYMKFASQCLSTNEQMNLPPFTTLCLLRCSSPTQKSNVDFLEKAV-LILSN 595 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 + V+GP+P+L K G +R Q+ + P + L ++ P+S KVKW Sbjct: 596 ---RTDINVIGPLPSLVSKSKGNYRHQVYIHAPKKTFLNKVLKFLTTEFEKWPESNKVKW 652 Query: 724 VLDVDPIE 731 D+DPI+ Sbjct: 653 SFDIDPID 660 >UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteria RepID=A5CXS0_VESOH Length = 680 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 229/530 (43%), Positives = 329/530 (62%), Gaps = 3/530 (0%) Query: 202 EQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 EQ A+ I + + + A+LL GVTGSGKTEVYL ++++++ Q KQ LV+VPEIGLTPQ Sbjct: 154 EQNIAIEQILKSTNQYHAFLLHGVTGSGKTEVYLHIIQSMIDQKKQVLVLVPEIGLTPQM 213 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 I F+ R V +HS LN++++L A+L AKNG+A +++GTRSA+F P N G+I+IDE Sbjct: 214 ITHFKSRLKTRVIAIHSQLNETQKLDAYLMAKNGDAGVILGTRSAIFAPISNFGLIIIDE 273 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA 381 EHD+S+KQQ +RY AR+L RA IP++LG+ATP+LE L KK + LT+RA Sbjct: 274 EHDNSFKQQSSFRYSARNLGFIRAQQSNIPLVLGTATPSLELLKIAMDKKITRITLTKRA 333 Query: 382 GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 G A ++D++ A L+ LI +++Q+L D QV+LF+NRRG+AP C C W Sbjct: 334 GGATLPKVSLIDMRSNTNDA-LSKILIEKIKQYLSIDKQVMLFINRRGYAPIYYCTQCNW 392 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 A+C CD H+ + L+CHHC ++ CP+C L +G GTE+LE+TL Sbjct: 393 KAQCNHCDSTMVYHRHINRLKCHHCGDEKIPEHVCPNCTKQSLKILGYGTEKLEETLYSY 452 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 F PI RIDRDTT RK + Q L +++ G I+IGTQML KGH F ++ +V +LDVD Sbjct: 453 FVDTPIIRIDRDTTRRKKSFAQHLEQINTGKPCIIIGTQMLTKGHDFSNLAMVGILDVDT 512 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 S +FR+ E AQL QV+GRAGR ++GEVV+QT +P+HP+ +L Y FA Q Sbjct: 513 GFLSTNFRATEYLAQLLIQVSGRAGRHKERGEVVIQTRYPDHPIFNFVLSSRYTQFASQL 572 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAP 681 L +R +PP++ ++ A N Q+A FL + L+ S + ++W GP+ Sbjct: 573 LKQRLSAMMPPFSHQALLCANAKNKQNAENFLHEAAILLKSIQMNSVEIW--GPIANTIE 630 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 K+ + + + LQ +RV L I++ IN + KV+W LD+DPIE Sbjct: 631 KKSDYYYFNLYLQSNNRVTLHQILSTFSQHINKLKLKNKVRWYLDIDPIE 680 Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 19/122 (15%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE--- 59 + VA+ +PL +TF+YL ++V G RV+VP +++ IGIV+++ D S NE Sbjct: 16 IIEVAISIPLSKTFNYLCDNEVSV--GVRVKVPLARKKV-IGIVLAIKDKSRY--NETNF 70 Query: 60 -----------LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 LK+V +VLD P+ S+ LL W+A+YYH+PI V+ + LP L G+ Sbjct: 71 RKKREDTLGYKLKSVEKVLDKIPILDKSILDLLFWSANYYHYPISKVISYTLPKNLLLGK 130 Query: 109 PA 110 A Sbjct: 131 EA 132 >UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae RepID=A5EW34_DICNV Length = 710 Score = 472 bits (1214), Expect = e-131, Method: Compositional matrix adjust. Identities = 290/723 (40%), Positives = 408/723 (56%), Gaps = 24/723 (3%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 PL + F Y + +G RVRVPFG + + IGI V+ + + +K + +VLD+E Sbjct: 6 PLYQRFIY--AAATPIASGMRVRVPFGAR-DAIGITVATVAQPKTHFH-IKKIRKVLDNE 61 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 PVF ++ R L + A YY P G V ALP L G + TE+G+A + + Sbjct: 62 PVFDATLLRFLQYTARYYQVPEGTVFAAALPNALLNGASNKRTLPAIYRLTEKGRAANAS 121 Query: 131 SLKRSPKQQQALAALRQGKIWRDQV-ATLEFNDAALQALRKKGLCDLASETPEFSDWRTN 189 KQQ L AL + Q+ T + A L L +G ++ +ET + Sbjct: 122 G----KKQQAVLHALTIQPLSGAQLRQTFSVSAAWLNDLVNRGWLEM-TET-----FIAP 171 Query: 190 YAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL 249 A + + LN Q AV TFS +L GVTGSGKTE+Y E +LA GKQ Sbjct: 172 PAATEKAPTLNAAQ-NAVLQTLITKTTFSVTVLDGVTGSGKTEIYWRWAELLLAAGKQIC 230 Query: 250 VMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 V++PEIGL ARFR RF+A V HS ++++ RLS W K G+ +V+GTRSALF Sbjct: 231 VLLPEIGLAMSIFARFRARFSA-CAVYHSEMSEAARLSVWQAVKAGDIKMVVGTRSALFL 289 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 PF LG I++DE HD SYKQ + +RYHA D+AV RA IPI+LGSATP LE Sbjct: 290 PFCRLGAIIVDEAHDQSYKQSDQFRYHAADMAVVRAKQHNIPILLGSATPTLEHYQQTLT 349 Query: 370 KKYRLLRLTRRA-GNARPAIQHVLD-LKGQKVQAGLAPALITRMRQHLQADNQVILFLNR 427 ++LL L RA +P+I V+D ++ K GL+ LI+ +RQHLQ Q++LFLNR Sbjct: 350 GTWQLLHLPERALTQHKPSI--VIDEIEPSKQIGGLSQPLISAIRQHLQRKQQILLFLNR 407 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPV 487 RG+AP + C +C W + C CD T+H L CHHC + +P +CP C ST L Sbjct: 408 RGYAPVMRCRECSWESSCTACDTMMTVHTFSRQLICHHCGRSQLLPVRCPKCASTQLYVC 467 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 GLGT++LEQT+ FP + RIDRD S +Q L ++H G ++IGTQ LAKGHH Sbjct: 468 GLGTQRLEQTVREQFPQARVLRIDRDVFSTAKQFQQALKQIHSGAIDVMIGTQWLAKGHH 527 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQ 607 FP + LVA++D D A +S+DFR+ ER AQL QV GRAGR + G + +QT H +HP+ Sbjct: 528 FPRLQLVAVVDADSAFYSSDFRAEERLAQLLVQVGGRAGRE-QAGTIWIQTQHAQHPIF- 585 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD 667 + L + Y A A+Q L R+ QLPP+++ + A+ H L +R++ + + Sbjct: 586 SALSQPYFATAQQLLTIRQQAQLPPFSAQTLFWAQHHELSRTLAVLTSMRDVAQKAEIGQ 645 Query: 668 EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDV 727 W LGP+PAL ++ G++R Q+++Q P++ LQ + AL+ + VK +DV Sbjct: 646 TWQW-LGPIPALIARKDGKYRAQMVVQAPNKKVLQRELAQVRALLWEESRASGVKVGIDV 704 Query: 728 DPI 730 DP+ Sbjct: 705 DPL 707 >UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter RepID=B0K293_THEPX Length = 732 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 258/743 (34%), Positives = 410/743 (55%), Gaps = 55/743 (7%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVF 73 R + Y +PEGM VK G RV VPF + G V+S++D + ++++K + +LDS +F Sbjct: 16 RVYTYRIPEGMNVKIGMRVSVPFNNRFIE-GYVISITDKASYSVDKIKDIHRILDSYSIF 74 Query: 74 THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSL- 132 + L W DYY + L +P+ ++QG ++++ + Sbjct: 75 DEKMIELAKWMKDYYKCYFSEALQTIMPVGIKQGEKKVKVV-----------KINIDEIP 123 Query: 133 ----KRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 K++PKQ + L L+ R + V L + +++L+ KG ++ E E + Sbjct: 124 SQLSKKAPKQYEILQYLKNRSPIRLSELVKVLNIDYGVIKSLQNKGYIEIYEE--EVLRF 181 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 + L L EQ AV + + TF +LL GVTGSGKTEVYL +++ + Sbjct: 182 SVKDIEKTKPLLLTEEQQRAVEEVKRSILTGTFDKYLLFGVTGSGKTEVYLQLIDEAIKI 241 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 GK A+V+VPEI LTPQTI RF RF V V+HSGL+ ER W K KNG +V+G R Sbjct: 242 GKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNGLVDVVVGVR 301 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALET 363 +A+F PF NLG+I+IDEEH+++YKQ + +Y+A+++A R E+ +++ SATP+LET Sbjct: 302 NAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIEKAVLVMASATPSLET 361 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADN 419 + +Y+L+RLT+R + P I+ V+++ +++ +G + L + ++++L+ Sbjct: 362 YYKANKGEYKLIRLTKRINVSMPQIE-VVNM-SEELASGNTSIFSRKLFSYIKENLKRKE 419 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q ILFLNRRG++ + C DCG++ +CP CD T H L CH+C + + CP C Sbjct: 420 QTILFLNRRGYSSFVSCRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEETMKDTCPKC 479 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 GS + +G+GTE++E + FP + R+D DTT +KG+ E+ + G A ILIGT Sbjct: 480 GSKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNGKADILIGT 539 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM++KG P+VTLV ++ D L DFRS+ER QL TQVAGRAGR K G VV+QT+ Sbjct: 540 QMISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKPGRVVIQTY 599 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHNNQHAPLFLQQLR 657 +H + T + Y F + + R + + PP++ +++V E ++++ Sbjct: 600 EDDHYSIVTAKQQNYVKFYNEEIKYREIFRYPPFSHLMNIVVSGEKE---------EEVK 650 Query: 658 NLILSSPLADEKLW----------VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 N +S+ L +KL +LGP PA K R+RWQ++L+ R I+ Sbjct: 651 NTAVSTYLTCQKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDR----DILTE 706 Query: 708 TLALINTIPDSRKVKWVLDVDPI 730 I + S+ ++ +D+DP+ Sbjct: 707 IAEEIQKMKYSKDIRIAVDIDPL 729 >UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED105 RepID=A6GL59_9BURK Length = 680 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 285/734 (38%), Positives = 403/734 (54%), Gaps = 63/734 (8%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 +V + PLP+ F Y T + G RV VP+G+Q RIG+V + ++ N +K V Sbjct: 2 NVLVAAPLPKAFTYQWHSEHTPRFGMRVIVPWGRQH-RIGLVQGAAPDQQMAEN-IKPVH 59 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 VLD + L+ +AA YYHHP+G + ALP LR P+ + E Sbjct: 60 SVLDHGECLSAHWQALIEFAAKYYHHPLGMIALEALPKALRVLNARGEEPVMVAKSREHA 119 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 Q K ++ LAA + GK DQ+ Sbjct: 120 Q-------KLLAERNDPLAASKGGKAKIDQL----------------------------- 143 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 E+ LN EQ AV + SAA F +LL GVTGSGKTEVYL +E L + Sbjct: 144 ----------EKPVLNAEQLDAVAQLSSAAG-FQPFLLYGVTGSGKTEVYLHTVEERLKR 192 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAP--VEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 G+Q LV++PEI LTP A ++ER AP V V+HS L + R AW +A G A ++I Sbjct: 193 GEQVLVLLPEINLTPAAQALYKERL-APHRVVVMHSNLAELTRTKAWFEAATGAADVIIA 251 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TR + TP LG+IV+DEEHD SYKQQ+G RYHARDLA+ A ++PI+LGSATPALE Sbjct: 252 TRLGVLTPLPRLGMIVVDEEHDPSYKQQDGMRYHARDLALMLAKQREVPIVLGSATPALE 311 Query: 363 TLCNVQQKKYRLLRLTRRA--GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 + Y+ L L RA G + P ++ +++ + GL+ + + Q+ +A Q Sbjct: 312 SWLKADLGAYKRLSLKNRAVLGASLPKVE-LINTANFPAKEGLSEPAMQALVQNFEAGKQ 370 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 I+FLNRRG+AP ++C+ CGW+A C C + H+ + LRCHHC + + VP CP+CG Sbjct: 371 SIVFLNRRGYAPQMVCNACGWVANCDHCTAHMVWHKNERMLRCHHCGAGQRVPTHCPTCG 430 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 + L G GT+++E+TLA L P I RID D+T KG +E L + H G A +L+GTQ Sbjct: 431 NQDLTGFGRGTQRIEETLAGLLPTANILRIDADSTRNKGQMEALLQQAHSGEADVLVGTQ 490 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAER-FAQLYTQVAGRAGRAGKQGEVVLQTH 599 M+AKGH F +VTLV L+VD +L+S +R+ ER FAQL QVAGRAGR +V+QT Sbjct: 491 MIAKGHDFANVTLVLALNVDASLYSHAYRAPERLFAQL-MQVAGRAGRRAGDARMVVQTR 549 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 +P+HPL L Y++FA + R+ ++PP++ +RA+ + FL R Sbjct: 550 YPQHPLFDALKAHDYESFASHEMQARKDARMPPFSHQATIRADHKKLANCLQFLSTARE- 608 Query: 660 ILSSPL--ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L PL AD +++ PVP + GG R Q+L++ SR L + LA ++ +P Sbjct: 609 -LGEPLVDADNPVFMCDPVPLTVVRVGGIERAQMLIESESRPALHRFLTQWLAQLHELPG 667 Query: 718 SRKVKWVLDVDPIE 731 S V+W L+VDP++ Sbjct: 668 S--VRWFLEVDPVD 679 >UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=32 Tax=Neisseriaceae RepID=A9M290_NEIM0 Length = 733 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 275/708 (38%), Positives = 388/708 (54%), Gaps = 10/708 (1%) Query: 29 GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 G RV VPF + + +G+V A ++ + ++ EP S LL + + YY Sbjct: 32 GTRVLVPF-RNKTVVGMVWETDIAPDMDTARILSIQTTFLDEPPLPESWRDLLSFTSRYY 90 Query: 89 HHPIGDVLFHALPILLRQGRPAAN-APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQ 147 H+P G +F ALP L++ R P ++ E G+A L R K+ AL Sbjct: 91 HYPTGQAVFAALPQGLKETRAVEMPQPPLFYALNEAGRA-QTPPLARFNKKAALWDALLS 149 Query: 148 GKIWRDQVATLEFNDAAL-QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATA 206 G + + + A L + ++G + +E + N S LN +Q A Sbjct: 150 GGMTMAALKQVNAQAAKLIEDWAEQGWIE-TTEAAKPVLRSCNGQASHSEFVLNADQQKA 208 Query: 207 VGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFR 266 AI +A F +LL G+TGSGKTEVY + VLAQG+Q L ++PEI LTPQ + R Sbjct: 209 SDAIQTALGRFQPFLLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVE 268 Query: 267 ERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 RF + P VLHS + +R +L+A G+A +VIGTR A+FTP ++G+IV+DEEHD Sbjct: 269 NRFADVPTAVLHSQMAAGKRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDG 328 Query: 326 SYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR 385 S+KQ RYHARDLAV+RA PIILGSATP+LE+ Q YRLL+LT RA A Sbjct: 329 SFKQDNELRYHARDLAVWRAKQGGCPIILGSATPSLESWHKAQSGAYRLLQLTERAHTAA 388 Query: 386 PAIQ-HVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAE 444 Q +L++ K+ G +P + ++Q+ +A +++LNRRGFAPAL C DCG+ Sbjct: 389 QLPQVDILNVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGYTFG 448 Query: 445 CPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG 504 CP C LHQ LRCHHCD + P+P +CP CG+ L VG GT+++E+TL P Sbjct: 449 CPNCSAKMVLHQRVRQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPK 508 Query: 505 VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF 564 + R+DRD+T+ K + IL+GTQMLAKGH F + LV +L+ DG+L+ Sbjct: 509 AAVVRVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLY 568 Query: 565 SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 SADFR+ ER QV+GRAGRA K G+V++QT PEHP+ + + Y FAE L E Sbjct: 569 SADFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYVVFAENELNE 628 Query: 625 RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRG 684 R+M +PP+ VRA+ A FL + + +PL E + G P L + Sbjct: 629 RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETL--APLLPESVSQFGAAPMLMVRLA 686 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG 732 R R QI L+ SR L ++ + ++ D K++W +DVDP E Sbjct: 687 ERERAQIFLESTSRQDLHRAVSLWVQVLQQNRDG-KIRWSVDVDPHEA 733 >UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID=B0U139_FRAP2 Length = 718 Score = 467 bits (1202), Expect = e-130, Method: Compositional matrix adjust. Identities = 280/743 (37%), Positives = 414/743 (55%), Gaps = 42/743 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VP DY + + V+ RV V G++Q IG +V+ + L +K Sbjct: 2 IVKVALAVPPSYLLDYSIKD-TNVELFSRVLVQVGERQ-LIGFIVAKDIKIDYELTRVKP 59 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI-LLRQGRPAANAPMWYWFAT 121 +++++D +P+ + +V RL+LW + YY + + + ALP L+ + + + + Sbjct: 60 ILKIID-QPI-SDAVQRLILWLSQYYCCDLYNAIRLALPNDFLKIEKVSPQKDTYVYL-- 115 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND----AALQALRKKGLCDLA 177 ++L K + KQQ L KI+ + A L F D A+ + K L D Sbjct: 116 ---DQIELQQHKLTSKQQDVL------KIFANNEA-LRFEDLKELASSYVINK--LLDKN 163 Query: 178 SETPEFSDWRTNYAVSGERLRL-NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 + ++N + + +L N EQ A I S + F LL GVTGSGKTEVYL Sbjct: 164 ILKKTYKLRQSNNTIESDLPKLLNPEQQYAFEQITSQSG-FKVSLLYGVTGSGKTEVYLH 222 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNG 295 +++ LA+ +Q LV+VPEI LTPQTI RF +RF + V LHS L+D RL+ WLK KNG Sbjct: 223 TIQSFLAKSQQVLVLVPEINLTPQTIKRFEKRFIDKNVVALHSKLSDKTRLTNWLKIKNG 282 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIIL 354 EA IVI TRS + FKNLG+I++DEEHDSSYKQQ RY+ARD+A++RA +P++L Sbjct: 283 EADIVIATRSGVLADFKNLGIIIVDEEHDSSYKQQTTTIRYNARDVAIFRASQLDVPVVL 342 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP++++ N KY LL+L +RA N+ +LDLK V G++ L + + Q Sbjct: 343 GSATPSIQSYYNYLIGKYNLLKLNKRALNSHQNTIELLDLKSSIVDNGISNILFSLIEQS 402 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVP 473 + Q ++F+N+ GFA AL+C CG EC RCD YTLH +L CH C S++P+ Sbjct: 403 INDHQQSLIFINKLGFAKALVCKGCGEAVECKRCDKPYTLHTHPYQYLECHFCGSRKPIV 462 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 CPSC + L G GTE+++ + FP I R DR L ++ Sbjct: 463 TACPSCNAEELFAYGSGTEKVQSRIEARFPYNKIVRFDRSNIKTMNDLHSINQMINDKQV 522 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 +++GTQM+AKGHHF ++TL L+++D L+S DF + ER AQ QV+GRAGRA K G Sbjct: 523 DVIVGTQMIAKGHHFENITLAGLINIDAGLYSTDFHAIERTAQTIVQVSGRAGRADKPGR 582 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHNNQHAPL 651 ++LQT+ P++ LLQ L+ Y F + L +R+ PP+T + +I ++D N Sbjct: 583 IILQTYQPDNKLLQLLVNSDYLDFLDYLLEQRKYASYPPYTYQAQIIAESKDENK----- 637 Query: 652 FLQQLRNLILSSPLADEK-LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN--GT 708 L L + LS L D + V P+PAL K+ +R+ ILL SR ++ II Sbjct: 638 VLNMLEQIYLS--LTDSSGVQVSKPLPALHLKKNNVYRYSILLTSNSRSQINSIIKWIAN 695 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 +++++ +S VK D+DPIE Sbjct: 696 TQIMSSLKNS--VKMYFDIDPIE 716 >UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V792_9PROT Length = 724 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 277/738 (37%), Positives = 421/738 (57%), Gaps = 22/738 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLP FDY + + + + G RV VPF + Q +G+V+ SEL + ++ Sbjct: 1 MQIVRVALDVPLPTLFDYTVDDAVVL--GQRVIVPFRRSQ-LVGVVMECVMFSELAVEKI 57 Query: 61 KAVVEVL-DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 K VV +L DSEP+ + + LL + ++YYH+PIG + ALP LR +P +++ Sbjct: 58 KPVVRILSDSEPI-SSKLLALLRFCSEYYHYPIGQTVIPALPARLRSDKPITVKHEYHYR 116 Query: 120 ATEQGQAVDLNSLKRSPKQQQA-LAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + +DL +++ + + AL+ + + + L + A L+ L + G + Sbjct: 117 LLDGAPPIDLIPQRKTAARNMVKMLALQPCNLQQLKTVALTAS-AQLKWLIEAGWVEAFE 175 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 P R + + +L EQ V A+ + + +LL G+TGSGKTEVY+ ++ Sbjct: 176 VNPLACLPRMHCFANAHKL--TDEQQQVVDAV-TQTSGYRCFLLHGITGSGKTEVYVHLI 232 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAWLKAKNGEA 297 VL G Q L++VPEI LTPQ F RF V LHSGL+++ERL W +A++G A Sbjct: 233 NRVLQTGGQVLLLVPEINLTPQLEHYFLSRFPVATLVSLHSGLSENERLKHWQQAQSGAA 292 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+GTR ++F L +I++DEEHD+S+KQQ+G RY ARD+A++RA +PI+LGSA Sbjct: 293 GIVLGTRLSVFAELPKLSLIIVDEEHDASFKQQDGLRYSARDVAIFRAKQCGVPILLGSA 352 Query: 358 TPALETLCNVQQKKYRLLRLTRRA-GNAR-PAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 TP+ E+ N +Y +L+LT RA +A P I+ + + V G++ L+ + + Sbjct: 353 TPSFESYHNALNGRYEMLKLTGRALADANLPEIKFIHSKQTVMVD-GISEVLLREIAHRI 411 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 Q +LF+NRRG+AP L+C +CGW+++C C LH LRCHHC Q VP Sbjct: 412 TRGEQSLLFINRRGYAPVLMCTECGWLSDCKNCAGKMVLHTKDQRLRCHHCGYQIHVPTL 471 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C L+PVG GT+++E+ L FP I R+DRD+T K E +++ I Sbjct: 472 CPECRHPELLPVGSGTQRVERVLIDRFPEARILRVDRDSTRNKRTWEAMRSKITANEVDI 531 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 ++GTQMLAKGH FP +TLV +L+ D AL+S+DFR+AE+ QV+GRAGRA K GEV+ Sbjct: 532 MVGTQMLAKGHDFPALTLVGILNPDSALYSSDFRAAEKLFSQLMQVSGRAGRADKPGEVL 591 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED--HNNQHAPLFL 653 +QT P+HP+ + L ++ +A LAER M PP+ ++RAE + +A L + Sbjct: 592 IQTEFPDHPMYRCLQQHDFEGWAASQLAEREMADFPPFAFQAMLRAEGLVEADVYAYLNM 651 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 +L + L+ P+ + G VPA +R R Q+L+Q SR LQ + + Sbjct: 652 AKLAGVKLNHPVE-----IFGVVPASLARRANHVRAQLLIQANSRRVLQQFLRVWQPGLA 706 Query: 714 TIPDSRKVKWVLDVDPIE 731 + S K++ LD+DP+E Sbjct: 707 DLA-SNKLRCSLDIDPLE 723 >UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales RepID=Q0K5N2_RALEH Length = 773 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 305/763 (39%), Positives = 414/763 (54%), Gaps = 55/763 (7%) Query: 3 VAHVALPVPLPRTFDYL-LPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V VAL P FDYL PE V G V VPFG++ +G+ V+ +D+S++P + L+ Sbjct: 29 VIRVALDTPADDCFDYLATPE---VAPGDLVVVPFGRR-SMVGVAVAYADSSDVPADRLR 84 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 V + L+ P L +AA YY +G+V+ ALP LR+ A W A Sbjct: 85 PVAQRLEWMPPLQPDWIGLAAFAARYYQRRLGEVMLPALPPALRE------AEGWPGLA- 137 Query: 122 EQGQAVDLNSLKRSPKQQQALAAL-----RQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 Q + + P +AL A R + +A L + LC Sbjct: 138 ---QRARTDEYRLLPGHAEALLAAVPPRARSVRALAQALAERAAAAEPLTLADARVLC-- 192 Query: 177 ASETPEFSDWRTNYAVSGER-----------------LRLNTEQATAVGAIHSAADTFSA 219 A+ ++W+ V R L+ EQ AV AI + A+ F+ Sbjct: 193 AAAPARLAEWQAAGWVEASRTARPLLPTDPAQPPSAAPPLHDEQRAAVQAI-AEAEGFAP 251 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQA--LVMVPEIGLTPQTIARFRERF-NAPVEVL 276 +LL GVTGSGKTEVYL ++ +L + QA L++VPEI LTPQ AR RF + P+ VL Sbjct: 252 FLLHGVTGSGKTEVYLHAMQALLERDPQAQVLMLVPEINLTPQLQARIAARFPHLPLAVL 311 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HSGL D ER WL A GEA IV+GTR A+ L +IV+DEEHD+SYKQQEG RY Sbjct: 312 HSGLADQERSLQWLAAHRGEARIVLGTRMAVMASLPALALIVVDEEHDTSYKQQEGLRYS 371 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLK 395 ARDLAV+RA I ++LGSATP++ET Q YR L L RA A ++DL Sbjct: 372 ARDLAVWRAKQRGIAVVLGSATPSMETWWRAGQGTYRKLVLRERAQAEATLPTVRLVDLN 431 Query: 396 GQKVQ-----AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 ++ + GL+ L+ + L Q +LFLNRRG+AP + C CGW++ CPRC Sbjct: 432 HERQRQRPLFEGLSVPLLEAIDARLARGEQSLLFLNRRGYAPVIACDSCGWLSGCPRCSA 491 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 Y LH+ + LRCHHC + PVP CP CG+ + P+G GT+++E+ LA FP I+RI Sbjct: 492 YLVLHRPERRLRCHHCGLEAPVPHHCPDCGNVDIAPLGRGTQRIEEALATRFPQARIARI 551 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D D+T RKG+ + EVH G IL+GTQM+AKGH F VTLV ++ D A+FS DFR+ Sbjct: 552 DADSTRRKGSAQAMFDEVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDFRA 611 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 AE QVAGRAGRAG GEV++QT +P+ P LQ L YD FA L ERR L Sbjct: 612 AEHLFASLMQVAGRAGRAGLPGEVLIQTRYPDTPALQALTRHDYDGFAASQLRERRQAGL 671 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 PP+ V+V A+ + A FL+ R + LA E + + PVP + R R Q Sbjct: 672 PPFCYQVLVTADHGQLERALQFLEVARRHAETCELAAE-VQLHDPVPMSMVRIFNRERAQ 730 Query: 691 ILLQHPSRVRLQHIING---TLALINTIPDSRKVKWVLDVDPI 730 +L++ SR LQ + T A + T +++ V+W L++DP+ Sbjct: 731 MLVEATSRPVLQRFVAEWVQTFADVGT--EAKGVRWQLEIDPL 771 >UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LE29_MAGSM Length = 738 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 294/748 (39%), Positives = 408/748 (54%), Gaps = 38/748 (5%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 A VAL +F Y +P + G V VP G R G+V + S + ELK Sbjct: 3 ALVALTGARDASFSYKIPAELADGCHPGYLVLVPVGNSL-RTGVVWACSATPQWCEGELK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + EVL E + + +LL W YYH P G V+ ALP LR R W Sbjct: 62 EIEEVLSDESLLDDELRQLLNWMIRYYHQPAGAVITAALPGHLRYDR--KQRIRW----- 114 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 A D +L + P QA+A Q + TL N R+ ++A Sbjct: 115 --NPAADPTTLAQQPAALQAIATALQKRSNGLTEETLARNHGRRGLSRRLKQLEMAGYIL 172 Query: 182 EFSDWRTNYAVS------GERLR-----LNTEQATAVGAIHSA--ADTFSAWLLAGVTGS 228 W + + R+ LN +Q AVG + +A A F+A+LL GVTGS Sbjct: 173 TEQSWNARHTATEAAESPTSRVMQAAPPLNEQQQQAVGQLVAALEAQHFAAFLLDGVTGS 232 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY +E+ LAQG+QAL++VPEI LTPQ I R+ RF+ + V HS ++ + R Sbjct: 233 GKTEVYFRGVEHCLAQGRQALLLVPEIALTPQLIQRYEARFHENLAVFHSEMSAARRYRD 292 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W +AK+G A +VIG RSALF PF LG+IV+DEEH+ SYKQ+EG Y+ARD+AV RA Sbjct: 293 WQRAKSGAARVVIGARSALFAPFAKLGLIVVDEEHEGSYKQEEGVPYNARDMAVVRARMN 352 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGL---- 403 Q ++LGSATP++E+L N QQ +Y L LT+RA G A P +Q V++L +K GL Sbjct: 353 QAVLVLGSATPSMESLYNAQQGRYHHLHLTQRATGVALPPVQ-VINLADKKNLQGLPFGT 411 Query: 404 --APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L M+Q QA Q +LFLNRRGFAPA+LC+ CG CP C TLH+ L Sbjct: 412 LLSHPLRQAMQQVWQAGKQSLLFLNRRGFAPAILCNLCGITVSCPNCSVALTLHKGAAKL 471 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH+CD + VP CP+C L+ G GTE+L+ + FP ++R+DRD ++ GA+ Sbjct: 472 VCHYCDHVQGVPDLCPNCKQLGLIQFGPGTERLQLEVESCFPEARVARLDRDAVAQSGAM 531 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ L + H G IL+GTQM+AKGHHFP +TLV ++ + L DFR+AER QL TQV Sbjct: 532 ERILKQFHEGQIDILVGTQMVAKGHHFPRLTLVGVVLAETTLSMPDFRAAERTFQLITQV 591 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGR + G+V +Q+ P H +Q + D FA+ R+++ PP+ ++R Sbjct: 592 AGRAGREAEVGQVYVQSFDPAHYAIQAAMAHDADRFADAEFGFRQLVGYPPFKRMAVLRF 651 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 N Q F+ +LR L+ P + VLGP PA K R+RWQ++++ + V+ Sbjct: 652 STPNVQEGGHFIHELRRLVPDQP----GVVVLGPAPAPLFKLRNRFRWQLMIKAET-VQG 706 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDP 729 H + L I RK++ +D+DP Sbjct: 707 VHAMVSQLLQIAQPMAGRKIRVDVDIDP 734 >UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK13_9BACT Length = 735 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 277/744 (37%), Positives = 407/744 (54%), Gaps = 28/744 (3%) Query: 1 MPVAHVALP-VPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 MP LP + L +TFDY +P GM ++ GCRVR+PFG+ ER G VV + D S+ P N Sbjct: 1 MPKFARVLPDMSLDKTFDYKIPAGMDLRLGCRVRIPFGRT-ERTGYVVDLVDKSDFPENR 59 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LKA+ ++ + + +L W ADYY + + + LP +R+ + F Sbjct: 60 LKAIA--VNEGHLIPEKMMQLGQWIADYYCTGMIQSVRNMLPAPVRKDKVKEKTQKLLSF 117 Query: 120 ATEQGQAVDLNSL-----KRSPKQQQALAALRQGKIWRDQVATLEFNDAA--LQALRKKG 172 A + + SL K+ P + + AL K + N +A +++L K G Sbjct: 118 A----EGIQPPSLVPELEKKYPPRAAVVKALLGLKEAPQALLMKVANVSASPIKSLLKAG 173 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVTGSGK 230 + + E + + + L L EQ A I + D + +L G+TGSGK Sbjct: 174 ILEEEVRHVERDPFGDEEVIISKPLELTDEQTDAFKLITNEMDEEKPATVVLYGITGSGK 233 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL + L++GKQA+V+VPEI LTPQT+ RFR RF V VLHSGL++ ER W Sbjct: 234 TEVYLQAIAEALSRGKQAIVLVPEISLTPQTVHRFRSRFGKQVSVLHSGLSEGERYDQWK 293 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 GE IV+G RSALF PF N G+IV+DEEH+ SYKQ RY+ARD+AV R ++ Sbjct: 294 LISRGETQIVVGARSALFAPFHNPGIIVVDEEHEPSYKQDSHPRYNARDIAVMRGIMDKC 353 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLKGQKVQAG----LAP 405 P++LGSATP+ ET+ N Q KY++ +LT+R A P+I+ ++D++ + G + Sbjct: 354 PVVLGSATPSFETMNNANQGKYKMAKLTQRPSTAVVPSIK-LVDMRTEAAATGSNQIFSR 412 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 LI ++Q L Q ILFLNRRG++ L C C + ++C C +T H+ + L CH Sbjct: 413 ELIESVKQQLHDRMQTILFLNRRGYSTHLTCEKCQYTSKCGDCSTSHTYHRKSNVLICHL 472 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + P +CP CG L GLGTE++E+ +FP I+R+D DT +RK + + L Sbjct: 473 CGDIKEPPTKCPDCGHKDLSFSGLGTEKIERLCRGVFPNARIARMDSDTMTRKDSHKTML 532 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + +G ILIGTQM+AKG HFP VTLV ++ D L ADFR+AER QL QV+GR+ Sbjct: 533 GDFQQGKYDILIGTQMIAKGLHFPRVTLVGVVFADAGLNMADFRAAERTFQLLAQVSGRS 592 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR G V++QT++P HP LQ L +DAF E R +M+ PP++ V++ Sbjct: 593 GRGDDAGRVLIQTYNPTHPALQCALEGDFDAFYEDEKMGREVMKFPPFSKMVLIHFRGPE 652 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + + D++L + VP+ K G++R+Q+ + + RL ++ Sbjct: 653 EGPLASLASDFSQHLSKACTKDDRL--MPAVPSPIEKVRGQYRYQLTIFSDNIRRLVRVL 710 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 N L L P ++ K ++DVDP Sbjct: 711 NW-LRLNYKAP--KEYKIIIDVDP 731 >UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadales RepID=B3E7V0_GEOLS Length = 758 Score = 454 bits (1168), Expect = e-126, Method: Compositional matrix adjust. Identities = 284/746 (38%), Positives = 409/746 (54%), Gaps = 32/746 (4%) Query: 5 HVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VA+P+PL TF Y +PE + ++ G RV VPFG+++ V+ S E +LK Sbjct: 24 EVAVPLPLDTTFHYRVPEDLAPRIQPGVRVFVPFGRRKV-TAYVLRFSTPPEG--QQLKG 80 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR-QGRPAANAPMWYWFAT 121 +++VLD EP++T + W ADYY HP+G+VL ALP + Q R + + A Sbjct: 81 LLDVLDPEPLWTEAELTFFQWIADYYLHPLGEVLKTALPTGINLQSRSSVDGE-----AV 135 Query: 122 EQGQAVDLNSL----------KRSPKQQQALAALRQGKIWRDQVATLEFNDAA--LQALR 169 G+ V + K K LA LRQ + F + + L+ L Sbjct: 136 SGGKKVRHERVFSALPADAPVKLRGKGLDILAFLRQSGSVSSAELKVRFGECSPNLRRLV 195 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLR-LNTEQATAVGAIHSAADT--FSAWLLAGVT 226 + GL + SE + D +V+ + + L Q A+ I +A D+ FS +LL G+T Sbjct: 196 ELGLVRM-SEHEVYRDPFAGLSVTKDSPKPLTLHQQQALTTILTALDSRYFSPFLLHGIT 254 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTEVYL + + LA G+ ALV+VPEI LTPQ + RFR RF + VLHS L+D ER Sbjct: 255 GSGKTEVYLQGIAHTLAAGRNALVLVPEISLTPQLVQRFRARFCDGIAVLHSALSDGERY 314 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W + + GE IVIG RSA+F P + +G+IV+DEEH++S+KQ +G RY+ARDLA+ R Sbjct: 315 DEWRRIRRGEVRIVIGARSAIFAPLERIGIIVVDEEHEASFKQSDGLRYNARDLALVRGQ 374 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPA 406 EQ ++LGSATP + T QQ K L L R GN RP + ++ L+P Sbjct: 375 QEQAVVLLGSATPLITTRFAAQQGKLGYLSLPERVGN-RPLPATSIINTRMTAESPLSPQ 433 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LI + +L+ Q +LFLNRRGFA L+C CG +CP C T H+ + CH+C Sbjct: 434 LIEALADNLERGEQSLLFLNRRGFASWLVCPACGADLQCPNCSVSLTYHRQRRKSLCHYC 493 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 D Q P P CPSCG L +G+GTE++E L FPG I+R+D DTTS KG + L Sbjct: 494 DYQVPAPCICPSCGELELKEMGVGTERIEHELLEQFPGARIARMDSDTTSGKGGHARILD 553 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 +V RG IL+GTQM+AKGH FP VTLV +L +G+L+ DFR+ ER Q+ +QV GRAG Sbjct: 554 KVGRGEVDILVGTQMIAKGHDFPGVTLVGVLQAEGSLYLPDFRATERTFQVLSQVIGRAG 613 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R G V+LQ P+H + ++ F ++ L R+ + PP+ ++ + Sbjct: 614 RGELPGRVLLQAMTPDHYGIAYAADHDFERFYQEELLFRQELNYPPYGFLAAIKLSATSE 673 Query: 647 QHAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + +Q ++ S ++ +LGP PA + GR+R QILL+ SR L+ ++ Sbjct: 674 KSLTSAAEQSAAVLRSIKSRLGLRVEILGPAPAPLYRLRGRFRQQILLKDSSRAALRRLL 733 Query: 706 NGTLALINTIPDSRKVKWVLDVDPIE 731 +A V+ +D+DP++ Sbjct: 734 ---IAYRREQSLPATVRMAIDIDPVD 756 >UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae RepID=Q1DCD8_MYXXD Length = 795 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 285/744 (38%), Positives = 407/744 (54%), Gaps = 24/744 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A +A+ P+ F Y LP+ + ++ G RV VPFG+ +G + + L Sbjct: 55 LASIAVGRPVRGEFTYTLPDELAGRLEPGQRVLVPFGRGTA-LGFYLGPASPPTGEKVRL 113 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA-PMWYWF 119 KAV VL+ P + LL +AA +Y +P+G+V+ ALP L + A P F Sbjct: 114 KAVQRVLEDSPSLPKDLIALLRFAAVHYRYPLGEVIRGALPPGLSKAVDEKEARPDVQHF 173 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQ--GKIWRDQVA-TLEFNDAALQALRKKGLCDL 176 A V L R+P Q ALA L G ++VA + L+ L +G L Sbjct: 174 AVALVNEVP-PELSRAPAQSAALAYLLAVGGSAPLEEVAHAIPGARETLKKLATRGFARL 232 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVY 234 +T E S + G L EQ A + +A D TF +LL GVTGSGKTEVY Sbjct: 233 EEKTVEASV--KEGLIQGRPDHLTPEQDAAGVVLRAALDAATFQPFLLHGVTGSGKTEVY 290 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L E+ L+ GK +L++VPEI LTPQ + RFR RF A V VLHS L D ERL W + Sbjct: 291 LRAAEHALSLGKGSLILVPEIALTPQLVGRFRSRFGAEVAVLHSALKDRERLFHWQALRR 350 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G+ I +G RSA+F P NLG+IV+DEEHD S+KQ+E RY ARDLAV R ++L Sbjct: 351 GDVKIAVGVRSAVFAPVDNLGLIVVDEEHDPSFKQEEKLRYQARDLAVVRGKQAGAVVVL 410 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--------LAPA 406 GSATPALETL NV++ +Y+LL L R + ++DL+ ++ + G L+P Sbjct: 411 GSATPALETLENVKRGRYQLLELKHRVDDRPMPTIELVDLRVERPREGVVTEEAPILSPP 470 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L+ M + + QVILFLNRRG + LLC CG +C CD T H++Q+ + CH+C Sbjct: 471 LLEAMAETIGRGQQVILFLNRRGHSTVLLCEVCGLSLKCSECDVCLTHHRSQNRVVCHYC 530 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 PVP QC C + ++ +G+GTE++E + P ++R+DRD+ S L + LA Sbjct: 531 GLAMPVPEQCLEC-TGPMLKLGIGTERVEAEVLERIPTARVARLDRDSASSAERLTEMLA 589 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 R +L+GTQM+AKGH FP VTLV ++ D +L DFR+AER L TQV+GRAG Sbjct: 590 SFARRELDVLVGTQMVAKGHDFPGVTLVCVVMADTSLSIPDFRAAERTFHLLTQVSGRAG 649 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R G V++QT++P+ ++ +L +D FA Q L R+ + PP++ VR E + Sbjct: 650 RGKDPGRVLVQTYNPDAEPVRRVLAHDFDGFANQELEWRKALAYPPYSRMAAVRLEGEHP 709 Query: 647 QHAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + + L N++ P A + +LGP A + G+ RWQ+LL+ P+ L ++ Sbjct: 710 EQTASVARSLGNIVSRHMPPASAGVRMLGPALAPISRIRGKTRWQLLLKGPTHTALAPLL 769 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 A + +P + VK V+DVDP Sbjct: 770 ARLEAALVDVPSA--VKVVIDVDP 791 >UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacterales RepID=C6PE53_CLOTS Length = 735 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 255/736 (34%), Positives = 402/736 (54%), Gaps = 38/736 (5%) Query: 12 LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 + R Y +P+ + +K G RV VP K G +++S+ E+P+ ++K ++ VLD Sbjct: 18 IDRILTYRVPDDIKNLKIGSRVLVPVNKSFVE-GYAINLSEKIEIPIEKVKPIMRVLDDF 76 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 VF + L +W DYY + + L +P ++ G T +D Sbjct: 77 TVFDEKLLNLAIWMRDYYKCNLSESLQCIIPSGIKNGIKKVKK------VTLNKGYLDDA 130 Query: 131 SLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGL-CDLASETP--EFSD 185 S+ +P+Q + L L+ + D V L + + + +L +KG+ C E + SD Sbjct: 131 SI--TPRQFEILNYLKDNGTVLLSDLVKDLNISYSTVNSLARKGIICVYYDEVNRLKMSD 188 Query: 186 WRTNYAVSGERLRLNTEQATAVGAI-HSAA-DTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 ++ ++L EQ + + HS + F +LL GVTGSGKTEVYL ++E + Sbjct: 189 YKKT-----DKLIPTKEQEFVINEVKHSIGRNVFEKYLLFGVTGSGKTEVYLQLIEKCIE 243 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 +GK+++V+VPEI LTPQTI RF RF V VLHSGL+D ER W + KNGE +V+G Sbjct: 244 EGKESIVLVPEISLTPQTIERFISRFGNLVAVLHSGLSDGERFDEWRRIKNGEVKVVVGV 303 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALE 362 R+A+F PF N+G+I+IDEEH+++YKQ + +Y+ +++A R E+ ++LGSATP +E Sbjct: 304 RNAIFAPFSNIGLIIIDEEHENTYKQSDFKPKYNVKEVAEKRCEIEKAVLLLGSATPQIE 363 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADN 419 + + +Y+LL+L R G P + V+++ + + L +R++L Sbjct: 364 SYYKALRNEYKLLKLKERIGLELPEVD-VVNMSRELADGNNSIFSRKLYKEIRENLMKGE 422 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q ILFLNRRG++ ++C DCG++ ECP CD T H + LRCH+C CP C Sbjct: 423 QTILFLNRRGYSSFVMCRDCGYVPECPNCDISLTFHANESKLRCHYCGYNINTVYVCPKC 482 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 GS + +G+GTE++E+ + LFP + R+D DTT KGA E+ E G A ILIGT Sbjct: 483 GSRRVRYLGIGTERVEKEVKKLFPRSRVLRMDIDTTKTKGAHEKIFNEFKNGNADILIGT 542 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM++KG P+VTLV ++ D L DFRS ER QL TQVAGRAGR K G V++QT+ Sbjct: 543 QMISKGFDIPNVTLVGVILADVTLNIPDFRSGERTFQLLTQVAGRAGRGSKPGRVIIQTY 602 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPLFLQQLR 657 ++ + + + Y++F ++ + R PP+T +++V N+ + Sbjct: 603 EEDNYSIISAKNQDYESFYKEEIRYRETYMYPPFTHLLNIVVSGPIKND--VVTCAASVY 660 Query: 658 NLI---LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 NLI ++ + VLGP A + +RWQI+++ R LQ + + ++NT Sbjct: 661 NLIYKTINKSVKKSYNKVLGPSSAPIERIKNNYRWQIIIKSSERAILQDVCD----VLNT 716 Query: 715 IPDSRKVKWVLDVDPI 730 + + +K D+DP+ Sbjct: 717 LKFHKGIKISFDLDPL 732 >UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULA1_AKKM8 Length = 738 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 278/732 (37%), Positives = 398/732 (54%), Gaps = 33/732 (4%) Query: 16 FDY-LLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 DY + PE VK GCRV+VP + + G V+++S+ + + LK +++++D EP+ + Sbjct: 16 LDYGIPPEAGDVKPGCRVQVPL-RNRTATGTVLTLSEPAPAWKDRLKPILKLIDPEPLIS 74 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA-PMWYWFATEQGQAVDLNSLK 133 + L WAADYY + ++ LP +RQ A M Y T + +D + Sbjct: 75 PVMMNLASWAADYYSVALDQMIRCLLPETVRQENTAEKMRKMVYLEKTPAREELD-ALYR 133 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAAL---QALRKKGLCDLASETPEFSDWRTNY 190 ++P+Q Q L K +A F AL ++L KG L E Sbjct: 134 KAPRQAQMLDYFSSAKQQSAPLAA--FGAGALNVARSLEAKGFISLKEEAVHRDPSTGEQ 191 Query: 191 AVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQA 248 V + ++LN++Q A+ I + AA+ LL GVTGSGKTEVYL + ++ GK A Sbjct: 192 FVPTQPMKLNSQQQKALEEITAMCAAERKKPVLLQGVTGSGKTEVYLQAVSQIVKSGKSA 251 Query: 249 LVMVPEIGLTPQTIARFRERFN---APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 L+MVPEI LTPQT+ RF+ RF + V VLHS L+D ER W ++G+A IVIG RS Sbjct: 252 LIMVPEISLTPQTVQRFKSRFAELPSSVAVLHSLLSDGERFDEWHAIRSGKARIVIGPRS 311 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 A+F P +NLG++++DEEHD+SYKQ+ RYH RDLAV RAH E ++LGSATP+LE++ Sbjct: 312 AVFAPLQNLGLVIVDEEHDASYKQESSPRYHGRDLAVLRAHLENCAVLLGSATPSLESIH 371 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMR----QHLQADNQV 421 N KY L++LT RA + + +LD+K + + R+R + L QV Sbjct: 372 NALIGKYSLVKLTERADGQQLPLIRILDMKTEGRNKSGPNVISERLRMSIDRRLDKGEQV 431 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 IL LNRRGFA ++ C DCG + C C T H+ + L CH C + PR CP C S Sbjct: 432 ILLLNRRGFARSIQCPDCGHVVTCLHCSLPLTYHRTEDRLMCHLCGFKALPPRSCPECRS 491 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 +++ G GT+++E+ L FP I+R+D D RK A+ L + IL+GTQM Sbjct: 492 ANILLQGYGTQKVEELLRRTFPAARITRVDADVARRKNAVRTILNQFRAHKIDILLGTQM 551 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 +AKG FP+VTLV +L+ D L D R+ ER QL TQVAGRAGR GEV++QT P Sbjct: 552 IAKGLDFPNVTLVGVLNADLGLHIPDPRAGERTFQLLTQVAGRAGRGDLSGEVIIQTFTP 611 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ----QLR 657 + P LQ + D FA Q L RR LPP+T ++ + A Q +LR Sbjct: 612 QSPSLQYARHHDTDGFAAQELEMRRTFDLPPFTHIAVLTIRSQHESMAEFATQTLAARLR 671 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL-ALINTIP 716 ++ P A + P+PA P+ G++R+QI ++ PS I++ TL L+ Sbjct: 672 GML--PPPA----TMTDPMPAPIPRAHGQFRFQITVKGPS----ARILSRTLRKLVQEAG 721 Query: 717 DSRKVKWVLDVD 728 + V+DVD Sbjct: 722 LGEDLTAVIDVD 733 >UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W073_DESAS Length = 747 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 277/752 (36%), Positives = 416/752 (55%), Gaps = 41/752 (5%) Query: 4 AHVALPVPL---PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A + + VP+ R F Y++P + +K G RV VPF ++ G VV S +++ Sbjct: 7 AEIVVDVPVRNVDRVFSYIVPADLFPAIKFGMRVIVPFAGRKV-TGYVVGFSGITQVSQE 65 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +LK V+ VLD+EPV T +W L W YY + L + +R + +W Sbjct: 66 KLKPVLAVLDNEPVITEELWTLARWMKAYYLCTLAQALKCMVSPAVRVKAAGSYTGLWIG 125 Query: 119 FATEQGQAVDLNSLKRSPKQQQAL--AALRQG---KIWRDQVATLEFNDAALQALRKKGL 173 FA Q V L L RSPKQ + AA + G K DQV + A + AL KGL Sbjct: 126 FADNQLAQV-LAKLNRSPKQSAVIKAAAGQPGLSPKALADQVGV---SSATVSALVGKGL 181 Query: 174 CDLASETPEFSDWRTNYAVSGERL---RLNTEQATAVGAIHSAADTFSAWLLA--GVTGS 228 L + T S R Y + + L EQA G I A ++ + + A G+TGS Sbjct: 182 --LQARTT--SVRRNPYPIKPTGIPGPVLTPEQAYCAGEIIRAIESSQSQVFALHGITGS 237 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTE+YL+V+ L G++ L+ VPEI LT Q + F+ER+ V VLHS L+ ER Sbjct: 238 GKTEIYLNVIARALVLGRKTLITVPEIALTGQMVNTFKERYGDTVAVLHSALSAGERYDE 297 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + +NG++ IV+GTRSA+F P G+++IDEEH+++YKQ + RYHAR++A+ RA Sbjct: 298 WQRIRNGDSKIVLGTRSAVFAPLSGPGLLIIDEEHEAAYKQDDQARYHAREVALQRAKLS 357 Query: 349 QIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAG---L 403 +ILGSAT +LE+ C Q++ YR L + R +P Q +DL+ + + Sbjct: 358 GAVVILGSATMSLESYCRAQKEGPYRYLSIENRI-EQKPLPQIKTIDLRAETHKGNPGIF 416 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 + AL+ ++ + ++ Q ILF+NRRGF+P ++C DCG++ +CP CD T H + LRC Sbjct: 417 SLALLQKIEEKIRLKEQTILFINRRGFSPIVICRDCGFVLKCPHCDISLTYH-SDLTLRC 475 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H+C+ PV +C +C S L G GT+++E+ + +FP + R+D DTTSRKGA + Sbjct: 476 HYCNYISPVINKCSNCASEQLRFAGTGTQKVEEEIRHIFPSAGVLRMDADTTSRKGAHAE 535 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L G A ILIGTQMLAKG + P+VTLV +++ D L DFR+AE+ QL TQVAG Sbjct: 536 ILKNFLDGKADILIGTQMLAKGLNLPNVTLVGVINADTTLHMPDFRAAEKTFQLLTQVAG 595 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 RAGR K GEV++QT++PEH ++ L Y F Q + RR + PP++ ++R Sbjct: 596 RAGRGEKPGEVIIQTYNPEHYSIKAALNNSYKDFYAQEMIIRRELGYPPFSR--LIRIIL 653 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLW------VLGPVPALAPKRGGRWRWQILLQHPS 697 + Q A +Q L+ L ++ + +LGP PA K ++RWQI+L+ Sbjct: 654 SSTQSA--LVQSGAFLLKECLLEAQRDFNPHGPDILGPAPAPLHKIKEKYRWQIVLKGKQ 711 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + L+ + + + + +R + ++DV+P Sbjct: 712 ALILRQLAAKGIDIFESRQGNRLLSIIVDVEP 743 >UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514 RepID=B9XLJ1_9BACT Length = 773 Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust. Identities = 278/785 (35%), Positives = 416/785 (52%), Gaps = 73/785 (9%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A V L + L + FDYL+P + V G RV+VPFG ++ +G V ++++ S L Sbjct: 2 IARVTLEIALRKEFDYLIPSELASQVDVGSRVQVPFGARKV-LGCVTAMAEESAH--ANL 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + +++V+ ++ + T + +L W +YY P L LP +R+ + A + A Sbjct: 59 RPILKVIGAQTLVTPKILKLARWIGEYYCCPPEIALKSVLPDAVRKEQ-AGWRERLFVRA 117 Query: 121 TEQGQAVDLNSLKRSPKQQQALAAL---RQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 Q + L + PK+QQ + + R+ ++ + E A +++L KGL + Sbjct: 118 LPQTE-----PLPKLPKRQQEVYRILEERKELPLQELIDLAETTAATVRSLEDKGLVTIT 172 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD---------------------- 215 +E E + + + + L LN +QA A+ I +A D Sbjct: 173 TEISERDPYAHEHILPSQPLPLNPQQARALERIIAAMDGQQAKPSTASAGDMTPVSSSNN 232 Query: 216 ---------------TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 S +LL GVTGSGKTEVYL L + L QGK A+V+VPEI LTPQ Sbjct: 233 FRLQSDDVPQTEPKNASSVFLLHGVTGSGKTEVYLQALAHALEQGKGAIVLVPEISLTPQ 292 Query: 261 TIARFRERFNAP-----VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 T+ RF+ RF++ V VLHS L+ ER W K + G A IVIG RSA+F P LG Sbjct: 293 TVERFKARFSSGPLQTLVAVLHSHLSAGERHDEWHKIRQGRARIVIGARSAIFAPVDPLG 352 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I++DEEH+ +YKQ+E RYHARD+A+ R E ++LGSATP++E+ N + KY LL Sbjct: 353 LIIVDEEHEHTYKQEESPRYHARDVAIVRGRMEGATVVLGSATPSMESFYNCSRGKYILL 412 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG-----LAPALITRMRQHLQADNQVILFLNRRGF 430 + R + + V+D++ Q ++ G +P L ++Q L+ Q ILFLNRRG+ Sbjct: 413 EMLERVDAKKMPLVRVVDMR-QAMRKGKSIPIYSPQLKEAIQQRLERKEQTILFLNRRGY 471 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC--PSCGSTHLVPVG 488 + +L C CG++A+CP C T H+ L CH C PVP C P CG+ + G Sbjct: 472 STSLQCPLCGFVAQCPNCSVSLTYHRRAQILCCHVCGHTEPVPSFCPGPKCGNPDIRYAG 531 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 LGTE++E TL LFP I R+D DT +K + L + G IL+GTQM+AKG HF Sbjct: 532 LGTEKVEDTLLKLFPHARIKRMDSDTLKKKDDYRRILGDFRLGKIDILVGTQMIAKGLHF 591 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P+VTLV ++ D AL ADFR+ ER QL TQVAGRAGR +GEV +Q+ P HP +Q Sbjct: 592 PNVTLVGIVYADMALHLADFRAGERTFQLLTQVAGRAGRGDIEGEVFVQSFTPFHPAIQY 651 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 + F EQ L R ++ PP + ++ + N + L LR + + + Sbjct: 652 ARRHDFAGFYEQELEFREQLKYPPVSRVAMLTLKGRNEEKVKLSADHLRRELEKALAGIK 711 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN---TIPDSRKVKWVL 725 +L + GP PA + +R+QI+L R R ++ LA++N ++P+ V + Sbjct: 712 ELIIAGPAPAPLARAESLYRYQIML----RARQMSEVSKRLAVMNQSLSLPED--VSLSI 765 Query: 726 DVDPI 730 D+DP+ Sbjct: 766 DIDPV 770 >UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWS5_HALOH Length = 745 Score = 438 bits (1127), Expect = e-121, Method: Compositional matrix adjust. Identities = 256/741 (34%), Positives = 394/741 (53%), Gaps = 34/741 (4%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDS 69 L R++DY +PE + + G V+VPFGKQ G + S + + ++K ++ ++ Sbjct: 16 LNRSYDYKIPEDLENKISIGTAVKVPFGKQI-ITGFITGFSSQTRVESVKIKEIMNIISE 74 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY--WFATEQGQAV 127 EP+F S+ +L W A YY + +V+ A+P L G+ + A E+ + V Sbjct: 75 EPLFDKSMLKLFAWVASYYKTYLINVIKIAIPTGLVSGKVGKIKKRYVKLLLAEEEARRV 134 Query: 128 DLNSLKRSPKQQQALAALRQGKIWRDQVATLE----FNDAALQALRKKGLCDLASET--- 180 R+PKQ + L + V+ L + + L +KG + Sbjct: 135 IEKINTRAPKQALVVKVLMENDNIDYTVSKLAETAGTSPGTVYRLIEKGYLGYVKKVKIR 194 Query: 181 -PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA-----DTFSAWLLAGVTGSGKTEVY 234 P+ + V +L Q + I + DTF LL GVTGSGKTEVY Sbjct: 195 RPDLGEKEDVKPV-----KLTPVQKQVIEKIEDSIEKGVPDTF---LLHGVTGSGKTEVY 246 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 ++ + QGK +++VPEI LTP + RF +F V V+HS L+ ER W + K Sbjct: 247 INTASRAVEQGKGVIILVPEISLTPLMVRRFYNKFGEQVAVMHSNLSLGERYDEWRRLKE 306 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G+A IVIG RSA+F+P +NLG+IVIDEEH++SYKQ E YHAR++AV R E ++L Sbjct: 307 GKAKIVIGARSAVFSPVRNLGLIVIDEEHENSYKQGENPYYHAREVAVMRGKLENASVVL 366 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 GSATP+LE+ ++ Y+ L L R R ++D++ + Q + +L + Sbjct: 367 GSATPSLESYYRARKGFYKYLSLPERINQERLPPVEIIDMRDELRQGNTSIFSRSLRDAI 426 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 + L QVI+FLNRRG+A +LC +CG + +C CD T H + LRCH+CD R Sbjct: 427 NKALSNKEQVIIFLNRRGYANFVLCRECGHVIKCNNCDISLTYHADEDLLRCHYCDYTRG 486 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 P +CP CGS + G+GTE+L+ LA F G + R+D DTT+RKG+ + L G Sbjct: 487 KPDKCPLCGSKLIKEFGIGTEKLQNELANEFVGARVDRLDVDTTTRKGSHHRILKRFEDG 546 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 IL+GTQM+AKGH +P+V++V ++ D L DFRS+ER QL TQVAGR GR KQ Sbjct: 547 KTDILVGTQMVAKGHDYPNVSVVGVISADTILNLPDFRSSERTFQLLTQVAGRTGRGSKQ 606 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V++QT++P+H +++ + + F + R + PP++ V + + Sbjct: 607 GRVIIQTYNPDHYSIKSSSHHNFREFYRHEIRLRHALNYPPFSLLVNIIISGLKEKIVVK 666 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 Q+L N ++ ++ LGP PA + ++RWQI+L+ S + H+++ Sbjct: 667 KAQKLYNFLMQYNQQINEM--LGPAPAPVYRLRKKYRWQIILKFKSYKKRNHVLSELQK- 723 Query: 712 INTIPD-SRKVKWVLDVDPIE 731 + +PD R V ++DVDP++ Sbjct: 724 -SFLPDQGRNVNIIIDVDPVK 743 >UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia RepID=B4D7U4_9BACT Length = 741 Score = 437 bits (1124), Expect = e-121, Method: Compositional matrix adjust. Identities = 270/731 (36%), Positives = 393/731 (53%), Gaps = 25/731 (3%) Query: 14 RTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 + FDY LPE + ++ G RVRVP + + + V+ + + +++P +K + EV+ +EP Sbjct: 15 KAFDYELPEAVAAVLQPGARVRVPV-RTRTALATVIELLEETDVP--GVKLISEVVSAEP 71 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + + + +L W +DYY + + LP ++R+ ++ A E + Sbjct: 72 ILSPLLLKLGAWISDYYCCSLEAAMKAVLPNVIRKAEVGHQTRLFARLAREVEEEELEKL 131 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFNDAA---LQALRKKGLCDLASETPEFSDWRT 188 K++P Q + L + E DA+ +QAL KKGL + E + Sbjct: 132 RKKAPLQAGVIDHLTEAAQPVSVTELAEKCDASHAVVQALVKKGLIVTEAARVERDPFGD 191 Query: 189 NYAVSGERLRLNTEQATAVGAIHSAAD-----TFSAWLLAGVTGSGKTEVYLSVLENVLA 243 V L +N EQ + A D LL GVTGSGKTE+YL ++ VL Sbjct: 192 ESFVHAAPLAMNPEQTAVFEHVRRAIDHPPDAAPKPLLLHGVTGSGKTEIYLQAIQLVLE 251 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAP---VEVLHSGLNDSERLSAWLKAKNGEAAIV 300 +G+ A+++VPEI LTPQT+ RF+ RF A V VLHS L++ ER W K ++G A IV Sbjct: 252 RGQTAIMLVPEISLTPQTVERFKSRFAATRHEVAVLHSHLSEGERHDEWHKIRDGRARIV 311 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSA+F P NLG+IV+DEEH+++YKQ+E RYH RD+AV RA E+ I+LGSATP+ Sbjct: 312 IGARSAIFAPCANLGLIVVDEEHENTYKQEETPRYHGRDIAVLRASMEKCAILLGSATPS 371 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQAD 418 LE+ N Q KY LLRL R + + ++DL+ + + G L+ LIT + L Sbjct: 372 LESFHNAQTGKYELLRLIARVDDKKMPFIRIIDLRMESKKHGAILSERLITAINDRLTKK 431 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLNRRGF+ +L+C CG + ECP C T H+A + CH C Q P++CP Sbjct: 432 EQTILFLNRRGFSTSLICEKCGHVCECPNCSVALTFHRAAARMVCHICGYQAVAPQKCPE 491 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C + G GTE++E +++ LFP I R+D D R+ A + L G IL+G Sbjct: 492 CRDPGIKYTGTGTEKVEDSVSRLFPKAVIKRLDADVMQRREAFRETLTAFRTGKIDILVG 551 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQVAGRAGR +GEV +Q+ Sbjct: 552 TQMIAKGLHFPNVTLVGIINADLGLHLPDFRAGERTFQLLTQVAGRAGRGDVEGEVFVQS 611 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL-R 657 P P +Q + +D F EQ + RR PP+T V++ + Q + L R Sbjct: 612 FTPFSPSIQHARHHDFDGFWEQEIEFRRQWDYPPFTHLVLIIVRSAHQQRGSFSAETLHR 671 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L P + + P PA K G +R+ ++++ S VRL + L + T P+ Sbjct: 672 RLKEELPPG---VTLSEPAPAPLEKSHGSYRFHLMMRTRSIVRLSRHLRAVLDKL-TFPE 727 Query: 718 SRKVKWVLDVD 728 V +DVD Sbjct: 728 D--VFVTVDVD 736 >UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JME8_9BACT Length = 749 Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust. Identities = 274/744 (36%), Positives = 397/744 (53%), Gaps = 42/744 (5%) Query: 14 RTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 R Y LP M V+ G VRVP G++Q IG++V +LPL +LK V++++ P Sbjct: 18 RPLHYRLPGSMEAMVEPGSLVRVPLGRRQT-IGLIVEKGCEPDLPLMQLKLVLDLVYPTP 76 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + T ++ RL W YY I +VL +P +RQG A + Y A + A L + Sbjct: 77 IMTPALLRLGSWLRQYYGASIQNVLETMIPGPVRQGMKAKHDK--YVTAVKTVDAEALAA 134 Query: 132 L-KRSPKQQQALAALRQGKIWRDQVATLEFND-----AALQALRKKGLCDLASETPE--- 182 L K++PKQ + L Q +R Q +L N AA L KKG + E Sbjct: 135 LEKKAPKQFELYQFLAQQ--FRAQKKSLVLNRLGASPAAYTGLLKKGFITEEARKVERVA 192 Query: 183 FSD--WRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVL 238 + D YA + E + LN EQAT V +I + TF LL GVTGSGKTEVY++ + Sbjct: 193 YDDELGDVEYATNQE-IVLNKEQATCVQSIIESVRTGTFITHLLYGVTGSGKTEVYIAAM 251 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERF----NAPVEVLHSGLNDSERLSAWLKAKN 294 E L GK L +VPE+ LTPQT+ R R RF +A V HS L+D ERL AW+ N Sbjct: 252 EEALKAGKSVLFLVPEVALTPQTVGRLRSRFTEHKDAHAVVWHSSLSDGERLDAWMALAN 311 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G A +V+G RSA+F P NLG++++DEEH+ ++KQ E RYH RD+AVYR++ E + +L Sbjct: 312 GTARVVVGARSAVFAPLPNLGLVIVDEEHEPAFKQDETPRYHGRDVAVYRSYLESVVCVL 371 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA----GLAPALITR 410 GSATP+LET NV++ KY+L LT+R + + I HV+D++ + ++ ++ L + Sbjct: 372 GSATPSLETFRNVKRGKYKLDSLTKRIDDRQLPIMHVVDMRIEMMRTRKPVTISSLLAEK 431 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 +R + Q ILF+NRRG+ ++C +CG + EC C T H++ + L+CH C + Sbjct: 432 LRDRWEKGEQSILFINRRGYNSTMMCTECGHVEECKHCSLPMTFHRSDNTLKCHLCGHEA 491 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P +CP C S + G GT+++E + + P I RID DT +K + L E + Sbjct: 492 DPPWRCPECKSDAIRGKGSGTQRIEDVVKSILPKARIVRIDTDTMGKKHLFREILGEFRK 551 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G +L+GTQM+AKG FP+VTLV ++D D +L DFR+ ER QL QV+GRAGR Sbjct: 552 GKIDLLVGTQMIAKGLDFPNVTLVGMVDADLSLHVPDFRANERTFQLLVQVSGRAGRGDL 611 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 GEVV+QT P +Q DAF E + R Q PP+ V N A Sbjct: 612 AGEVVVQTFTPHADPIQFARRGEVDAFLEVEIESREQFQYPPFRHLVRQVFRSRNADKAM 671 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 F +Q + + K+ + GP P K ++R+ I ++G + Sbjct: 672 FFAEQFARKVEARMAG--KIEMRGPTPCSIEKMKDQYRFHIWY-------FTTNVSGLMR 722 Query: 711 LINTIPDS----RKVKWVLDVDPI 730 + T+ + V +LDVDP+ Sbjct: 723 ELKTVEAEVILPKDVIQILDVDPM 746 >UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=106 Tax=Firmicutes RepID=A4VTF2_STRSY Length = 812 Score = 436 bits (1120), Expect = e-120, Method: Compositional matrix adjust. Identities = 287/806 (35%), Positives = 414/806 (51%), Gaps = 94/806 (11%) Query: 3 VAHVALPVPLPRT---FDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDAS-EL 55 +A + + VPL +T + Y +P + +K G RV VPFGK I GIVV + D E Sbjct: 18 LAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDEN 77 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGD----VLFHALPILLRQG---- 107 L +LK + EVLD PV + W AD + +L LP LL Sbjct: 78 SLQDLKELAEVLDYSPVLNQEQF----WLADQMRKSVFSYKITLLKSMLPSLLNSTYDKL 133 Query: 108 -RPAANAPMWYWFA----TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD-------QV 155 RP M + EQ + DL+ +Q + + + GKI D Q+ Sbjct: 134 IRPGIGLEMAEQISLFGDKEQIRFSDLDV----TEQGKIMRLAQSGKILVDYVAKDKKQI 189 Query: 156 ATLEFNDAALQALRKKGLCDLA-------------SETPEFSDWRTNYAVSGER------ 196 T ++ L+ LR+ + + A SE S+ +++Y+ R Sbjct: 190 KTEKWYRVCLEKLREADISNRAKKRQQLREFLLEQSEDQLLSNLKSDYSADTLRYFQEKG 249 Query: 197 ------------------------LRLNTEQATAVGAI-HSAADTFSAWLLAGVTGSGKT 231 L LN EQA AV I S +LL GVTGSGKT Sbjct: 250 YIEVWEEEVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKT 309 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL V++ VL GK A+++VPEI LTPQ RF RF V +LHSGL+D E+ W K Sbjct: 310 EVYLQVIDRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQVAILHSGLSDGEKYDEWRK 369 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + G A +V+G RSA+F P NLGVI+IDEEH+++YKQ RYHARD+A RA + Sbjct: 370 IEAGNAQVVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHARDVAKLRADYNRAT 429 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLK---GQKVQAGLAPAL 407 ++LGSATP+LET + Y L L +RA AR V+D + GQ+ + P L Sbjct: 430 LVLGSATPSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVL 489 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I ++R+ L QV+L LNRRG++ ++C DCG + +CP CD TLH + CH+C Sbjct: 490 IEKIREKLARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCG 549 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 Q+ +P+ CP+C S + G GT++ L L P I R+D DTT +KGA E L Sbjct: 550 FQKGIPQTCPNCQSRSIRYYGTGTQKAYDELQELLPEARILRMDVDTTKKKGAHEDLLER 609 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 RG A IL+GTQM+AKG FP+VTLV +L+ D AL DFRS+ER QL TQVAGRAGR Sbjct: 610 FGRGEADILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGR 669 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV----RAED 643 A K+GEV++QT++P H + + Y+ F + R+ + PP+ V + ++E+ Sbjct: 670 ADKEGEVLIQTYNPNHYAIAFAKEQDYEGFYRYEMDIRKNLGYPPYYFTVGLTFSHKSEE 729 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 + A + LR + + + +LGP P + + +QI+L++ RL+ Sbjct: 730 FVVKKAYETVAFLRQHLTDA------IQILGPTPKPIARTHNLYHYQIILKYRHEDRLEE 783 Query: 704 IINGTLALINTIPDSRKVKWVLDVDP 729 ++N L +++ ++ ++D +P Sbjct: 784 VLNQILDWTQE-RENQDLRLIIDNEP 808 >UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oenococcus oeni RepID=Q04FR0_OENOB Length = 803 Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust. Identities = 277/810 (34%), Positives = 428/810 (52%), Gaps = 90/810 (11%) Query: 1 MPVAHVALPVPLPRT---FDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASEL 55 M A V + +P +T F YL+P+ + G RVRVPFGK+ +G VV+V SE Sbjct: 1 MRTASVIVDLPTRQTNQPFTYLIPDDLLDFNLLGHRVRVPFGKRN-LMGYVVAVGQ-SER 58 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAAD----YYHHPIGDVLFHAL-PILLRQGRPA 110 +LK + ++D +PV + +L W ++ Y I +L +A P L+ + Sbjct: 59 SDFQLKKIESIIDEKPVLNSEMLKLSEWLSNYVFSYRVQVIQTILPNAFKPKYLKGLKIV 118 Query: 111 ANAPMWYWFATE-QGQAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVA------------ 156 P Q ++ + +Q + + +L RQGKI + Sbjct: 119 DQVPEKIKENIFLNNQEIEFLPKNYTSEQIKVINSLIRQGKIVQTTTIQKKNKGKKVKVL 178 Query: 157 --TLEFNDAALQALRKKGLCDL-----------------ASETPEFSDWRTNYAVSGER- 196 L ND A L KK L D E E D + ++ E+ Sbjct: 179 SNNLNDNDIATN-LNKKSLSDSQKKLLIFLSGHRDGFFQVKELAEILDISKSTILTAEKK 237 Query: 197 -------------------------LRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSG 229 + LN++Q ++ SA + +LL G+TGSG Sbjct: 238 SWLKKSEVRMTRNPVKKIAVTKTNAVELNSDQKKVFNSVESAITKNENKTFLLEGITGSG 297 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVYL ++E +AQGK AL++VPEI LTPQ I + RF V +LHSGL+D ERL W Sbjct: 298 KTEVYLQLIEKTIAQGKTALLLVPEIALTPQMIRLVKSRFLDSVALLHSGLSDGERLDQW 357 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + ++G+ IVIGTRSA+F+P N+G+I++DEEH+++YKQ+ RYHARD+A++RA Q Sbjct: 358 EEIRDGKIKIVIGTRSAVFSPLTNIGLIIMDEEHETNYKQEGNPRYHARDIALWRAKYHQ 417 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRA--GNARPAIQHVLDLKG--QKVQAG--L 403 +LGSATP+LE+ Q+ ++LL + RA G P + ++D++ QK A Sbjct: 418 AVTLLGSATPSLESRARAQKGIFKLLTMNHRAVSGAKLPDVS-IVDMREVWQKEHADNDF 476 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 +P L+ ++ + + Q IL LNRRGF+ ++C +CG++ CP C+ TLH H L+C Sbjct: 477 SPTLLKKIEERKENHEQTILLLNRRGFSSFVMCRNCGYVPRCPNCNLSLTLHMDSHSLKC 536 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H+C + +P++CP CGS + VG GTE++E L L G+ ++R+D+DTT RKG+LE+ Sbjct: 537 HYCGYEEAIPKKCPVCGSPQIRYVGTGTEKIETKLNSLVNGIRVARLDQDTTKRKGSLEK 596 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L + +G +L+GTQM+AKG FPDVTLV +++ D L DFRS E+ QL TQVAG Sbjct: 597 ILRDFGKGNYDVLLGTQMVAKGLDFPDVTLVGVINADIGLNLPDFRSGEKTFQLLTQVAG 656 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 R+GRAGK GEV++QT +P++ ++ + Y+ F + ++ R + P+ + V + Sbjct: 657 RSGRAGKTGEVIIQTFNPDNYAIKLAADQNYEGFYKTEMSIRHIADYSPYYYTIQVGIDG 716 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 + A + ++ I LA E + VLGP P K R+ +QI+L++ Sbjct: 717 PDQFPASRAIDEVAEFI-KPKLAKETI-VLGPTPKAIAKLRNRYYFQIILKYKKDPN--- 771 Query: 704 IINGTLALINTIPDSRKVKWV---LDVDPI 730 I TL+ + T+ + K + +D DP+ Sbjct: 772 -IESTLSELQTVFGEKLPKDIYLSIDRDPV 800 >UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRR8_DESOH Length = 679 Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust. Identities = 282/742 (38%), Positives = 392/742 (52%), Gaps = 89/742 (11%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGC--RVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VA+ +P+ +T+ Y +PE + ++A C RV+VPFG+Q G V+ +A+ E+K Sbjct: 8 EVAIHLPVFQTYTYSVPEPLLLQAVCGRRVQVPFGRQMV-AGTVLG--EATACDNAEIKP 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V VLD P+F ++ W ADYY +P+G+ + +AL PA + P Sbjct: 65 VAAVLDDGPLFPATMIPFFRWVADYYLYPLGETIANAL--------PAGDLPK------- 109 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 K +P GKI +D V + +TP Sbjct: 110 ----------KSAPPV---------GKIPKDAVGD-----------------PILPDTPP 133 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGSGKTEVYLSVLENV 241 L T+Q V + S D F + LLAG+TGSGKTEVY+ V+ Sbjct: 134 ---------------DLTTDQEAVVADLVSRLDAGFCSCLLAGITGSGKTEVYMRVVAAA 178 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 LA GK ALV+VPEI L Q RF RF V VLHSGL+ +ER W K GEAAI I Sbjct: 179 LAMGKTALVLVPEIALIAQAEHRFCARFGHTVAVLHSGLSRTERWHQWSKIARGEAAIAI 238 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P G+I++DEEHD+SYKQ+ G RY+A DLAV RA ++LGSATP++ Sbjct: 239 GTRSAVFAPLDRPGIIIVDEEHDTSYKQESGLRYNACDLAVVRAKLSDAVVVLGSATPSV 298 Query: 362 ETLCNVQQKKY-RLLRLTRRAG-NARPAIQHVLDLKGQKVQAG----LAPALITRMRQHL 415 ++L N K+ + R+ RR PAI V+DL+ Q+ + G ++ L M + L Sbjct: 299 QSLHNATTGKFSKTYRMDRRINRQPLPAIT-VVDLREQQARRGPRAYISDELHRAMAETL 357 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 NQV+LFLNRRGFA +C CG +C CD TLH+ + RCH C R R Sbjct: 358 AQGNQVLLFLNRRGFASLPVCAACGNTIKCKHCDISLTLHKGANAFRCHFCGYSRAAARG 417 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C CGS+ + +GLGTE++E+ + LFP ++R+DRDTT+RKGA+ + L ++ I Sbjct: 418 CDICGSSSIKLLGLGTEKVEEAVKQLFPEASVARLDRDTTTRKGAMLRILKDLKNRKIDI 477 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+AKGH FP +TL+ ++ D +L DFR+ ER QL QVAGRAGR G V+ Sbjct: 478 LVGTQMIAKGHDFPGITLIGVICADLSLNFPDFRAGERTFQLLAQVAGRAGRGVDPGRVI 537 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPL-- 651 LQT++P+H + + AF +Q +A RR + PP++ H+ + A D A Sbjct: 538 LQTYNPDHLCIAAATRQDGSAFYDQEIAFRRQLGYPPFSRMVHLHISATDPAKAKARARE 597 Query: 652 ---FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 L+N S+P + VLGPV A K R+RWQILL+ S ++ Sbjct: 598 AGDCCTALKN---SAPAVFGAVEVLGPVEAPIHKLASRYRWQILLKSRSAAAVKSFAARL 654 Query: 709 LALINTIPDSRKVKWVLDVDPI 730 LA V+ V+DVDP Sbjct: 655 LAQDGQRLRKGGVRLVVDVDPF 676 >UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=Staphylococcaceae RepID=A5IS97_STAA9 Length = 802 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 240/618 (38%), Positives = 355/618 (57%), Gaps = 28/618 (4%) Query: 129 LNSLKRSPKQQQALAALRQGK---IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 L L++ KQ A L + + I+ + + F+ ++L L KKG + E Sbjct: 192 LAKLEKVIKQYDLYAYLSEEQHKTIFLTDIEDMGFSKSSLDGLIKKGYVEKYDAVVERDP 251 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 ++ + +L +Q A AI + + +LL GVTGSGKTEVYL +E+VL+ Sbjct: 252 FKDRVFEQESKQQLTEDQYKAYEAIKAKIVSQEQETFLLHGVTGSGKTEVYLQTIEDVLS 311 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 QGKQA+++VPEI LTPQ + RF+ RF V VLHSGL++ ER W K ++ A + +G Sbjct: 312 QGKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKIRDDRARVSVGA 371 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RS++F PFKNLG+I+IDEEH+S+YKQ++ RYHAR++A +R+ P+ILGSATP LE+ Sbjct: 372 RSSVFAPFKNLGLIIIDEEHESTYKQEDYPRYHAREIAQWRSEYHHCPVILGSATPCLES 431 Query: 364 LCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA----D 418 ++ Y LL L R A P I ++D++ +++ G +R+ +Q Sbjct: 432 YARAEKDVYHLLSLPNRVNQQALPEID-IVDMR-EELSEGNRSMFSKDLREAIQLRLDRQ 489 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 QV+LFLNRRG+A +LC DCG++ +CP CD T H+ L+CH+C Q P QCP+ Sbjct: 490 EQVVLFLNRRGYASFMLCRDCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQETPPNQCPN 549 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C S H+ VG GT+++E+ L F I R+D DTTS+KGA E+ L E +G IL+G Sbjct: 550 CESEHIRQVGTGTQKVEELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFEKGNGDILLG 609 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG +P++TLV +L+ D L DFR++ER QL TQVAGRAGR K G+V++QT Sbjct: 610 TQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHEKAGQVIIQT 669 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 ++P+H + + Y F Q + R++ + PP+ ++I H + Q + Sbjct: 670 YNPDHYSILDVQKNDYLTFYRQEMEYRKLGKYPPYY-YLINFTISHKEMKKVMEASQHVH 728 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 IL L EK VLGP PA + +R+QIL+++ S G L I + D Sbjct: 729 KILLQHLT-EKALVLGPSPAALARINNEFRFQILVKYKSE-------PGLLQAIQFLDDY 780 Query: 719 RKVKWV-------LDVDP 729 K++ +D+DP Sbjct: 781 YHEKFIKEKLALKIDIDP 798 >UniRef50_C3XBI2 Primosomal protein N' directs replication fork assembly at D-loops n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XBI2_OXAFO Length = 677 Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust. Identities = 238/550 (43%), Positives = 329/550 (59%), Gaps = 18/550 (3%) Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK--QA 248 A + E+ L Q AV AI F ++L GVTGSGKTE+YL +E L Q Q Sbjct: 134 ATNMEKPVLLKAQEQAVSAI-VKTRGFKPFVLYGVTGSGKTEIYLQAIEEKLKQSDAMQV 192 Query: 249 LVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 L+MVPEI LTPQ R RF + LHS L +SERL WL+ G A IV+GTR A+ Sbjct: 193 LIMVPEINLTPQLEVSVRSRFPGVTIATLHSRLTESERLKNWLQIHTGVARIVLGTRLAI 252 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 LG+IV+DEEHD SYKQQEG RY ARDLAV+RA+ IP++LGSATP+LE+ +V Sbjct: 253 LASMPQLGLIVVDEEHDPSYKQQEGLRYSARDLAVWRANQLGIPVVLGSATPSLESWQHV 312 Query: 368 QQKKYRLLRLTRRA--GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 +Y L L RA PAI+ ++D + +Q G +P+LI +++ L+ Q +LFL Sbjct: 313 LSGRYVKLELPERAVKDAVLPAIR-LIDATREPLQNGFSPSLINAIKRRLEKSEQSLLFL 371 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRG+AP + C CGWI+ C RC Y H++ H LRCHHC +RP+PR CP CG+ L Sbjct: 372 NRRGYAPVITCEACGWISVCERCTAYMVYHKSHHLLRCHHCGLERPIPRVCPDCGNIDLQ 431 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 +G GT+++E+ LA FP I RID D+T +KG+LE L VH+G I+IGTQM++KG Sbjct: 432 TLGRGTQRIEEGLAGYFPDARILRIDADSTRKKGSLEAALEMVHKGEIDIVIGTQMISKG 491 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA-----GKQGEVVLQTHH 600 H F ++TLV +L+ D ALFS D+R+ ER QVAGRAGR G + EV++QT + Sbjct: 492 HDFQNMTLVGVLNPDTALFSHDYRAGERLFSQLMQVAGRAGRGGVSEHGNRSEVLIQTRY 551 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P HPL Q L Y + L ER+ LPP+ V++ AE ++A FL+Q + I Sbjct: 552 PMHPLYQAALTHDYGNYVSDLLMERQNAGLPPFGFQVLLFAEARKVENALDFLRQAIDAI 611 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 E + + P+P + R Q+L++ SR RLQ ++ + ++ + Sbjct: 612 PEP----EAVIINEPIPMAMMRIANVERAQLLIESTSRGRLQGMLKEWIPVLRNMKTG-- 665 Query: 721 VKWVLDVDPI 730 ++W ++VDP+ Sbjct: 666 IRWHIEVDPM 675 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 5/113 (4%) Query: 3 VAHVALPVPLPRTFDYLLP---EGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 + V L PL FDY P E V K G V VPFG+++E G++V V + SE+ N Sbjct: 6 IVQVVLDTPLDFYFDYRYPVEAENFPVPKIGMLVVVPFGRREE-AGLIVDVKEESEIDEN 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 +LK VV V+ P L +AA YY P+G+V ++P +R + A Sbjct: 65 KLKDVVSVISEIPPLRTDWIDLCRFAAGYYQRPLGEVALPSIPKNIRANKKLA 117 >UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID=PRIA_BACSU Length = 805 Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust. Identities = 219/575 (38%), Positives = 334/575 (58%), Gaps = 9/575 (1%) Query: 161 NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFS 218 + A ++ L +KGL + E ++ E L L EQ A I +D Sbjct: 230 SSATIKTLIQKGLLKESYEEVYRDPYQDKMFKKTEPLPLTDEQRAAFEPIRETLDSDEHK 289 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +LL GVTGSGKTE+YL +E VLA+GK+A+V+VPEI LTPQ + RF+ RF + V V+HS Sbjct: 290 VFLLHGVTGSGKTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHS 349 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 GL+ E+ W K E +V+G RSA+F PF+NLG+I+IDEEH+SSYKQ+E RYHA+ Sbjct: 350 GLSTGEKYDEWRKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAK 409 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 ++A+ RA P++LGSATP LE+ Q+ Y LL L R + ++D++ ++ Sbjct: 410 EVAIKRAEHHSCPVVLGSATPTLESYARAQKGVYELLSLKHRVNHRVMPEVSLVDMR-EE 468 Query: 399 VQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 ++ G + L+ ++ + + Q +LFLN+RG++ ++C DCG++ +CP CD T Sbjct: 469 LRNGNRSMFSVELMEKLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTY 528 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ L+CH+C + PVP CP C S H+ G GT+++E+ L + P + R+D DT Sbjct: 529 HRYGQRLKCHYCGHEEPVPHTCPECASEHIRFFGTGTQRVEEELTKVLPSARVIRMDVDT 588 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 TSRKGA E+ L+ G A IL+GTQM+AKG FP+VTLV +L D L DFRSAE+ Sbjct: 589 TSRKGAHEKLLSAFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEKT 648 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL TQV+GRAGR K G V++QT+ P H +Q Y+ F + +A RR PP+ Sbjct: 649 FQLLTQVSGRAGRHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRREQSYPPYY 708 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 +V A + +++ + + ++ AD K +LGP + + R+R+Q +++ Sbjct: 709 YLALVTVSHEEVAKAAVTAEKIAHFLKANCGADTK--ILGPSASPIARIKDRYRYQCVIK 766 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + +L ++ L + + V +D++P Sbjct: 767 YKQETQLSALLKKILEHYKREIEQKHVMISIDMNP 801 Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 5/78 (6%) Query: 12 LPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLD 68 + R FDY +P+ GM +K G RV VPFG ++ + G V +V +AS+L +K V ++LD Sbjct: 15 IDRPFDYKIPDHLKGM-IKTGMRVIVPFGPRKIQ-GFVTAVKEASDLSGKSVKEVEDLLD 72 Query: 69 SEPVFTHSVWRLLLWAAD 86 PV T + L W +D Sbjct: 73 LTPVLTEELMILSSWLSD 90 >UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae RepID=D2R7W4_9PLAN Length = 769 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 275/754 (36%), Positives = 400/754 (53%), Gaps = 37/754 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSD--ASELPLN 58 VA V P FDYL+PE + +K G RV+VP G +E +G SV+ AS PL Sbjct: 26 VAEVVFRDPPFGPFDYLIPEPLAPRLKPGARVQVPLGASREVVGYCTSVTSKPASGRPL- 84 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 KA+ V+D P+ + L W +DYY P G VL +P +R A + Sbjct: 85 --KAIAAVIDDVPLVERKMLELTRWMSDYYLCPWGQVLHGVVPAGVRGN--AGTRETTFL 140 Query: 119 FATEQGQAVDLNSLKRSPKQQQA-----LAALRQGKIWRDQVATLEFND------AALQA 167 + +G+ + + + RS ++ + L LR ++ +E + A + Sbjct: 141 SLSAEGRQILASGVDRSGEKPKKVLPAHLEILRILGTSPRELTPVELGEFASCSIAQITG 200 Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGV 225 LRKK S E L L+ Q+ A+ AI+ A D T + LL GV Sbjct: 201 LRKKKWIASDVRRVRSSSHEELPLARTEPLALHPAQSHALAAINRAIDRRTSATILLHGV 260 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKTEVY+ +E V++ G+QA+V+VPEI LTPQT RFR RF+ V VLHS L+D+ER Sbjct: 261 TGSGKTEVYIQAIERVISFGQQAIVLVPEISLTPQTRQRFRSRFDR-VAVLHSHLSDAER 319 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 W + GE +++G RSA+F P +LG+IVIDEEHD S+KQ E RYHARD+A +RA Sbjct: 320 HYHWEQIARGEVQVIVGARSAVFAPAPHLGLIVIDEEHDGSFKQSEAPRYHARDVAEHRA 379 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHV---LDLKGQKVQA 401 IP++LG+ATP+LE+ + KY L+ + R G P + + ++ + + + Sbjct: 380 LQLGIPLVLGTATPSLESYYRARSGKYELVPMPDRVEGRELPHVGTIDLRVEFQSRSSRG 439 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L T + Q + QVIL LNRRG++ + C CG++A+C CD T H+ + L Sbjct: 440 SIGRQLHTAIAQAIAEKGQVILLLNRRGYSTHVQCPACGFVAKCEHCDLALTHHREEQLL 499 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CHHCD P +CP C + GLGTE+LE + FP + R+D DT + G+ Sbjct: 500 VCHHCDFTTKPPERCPDCTFDGIRYSGLGTEKLEAEIKARFPAAKVLRMDSDTMQKPGSH 559 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E LA+ G +IL+GTQM+AKG FP+VTLV +++ D AL DFR+AER QL TQV Sbjct: 560 EAALAKFRSGEVQILLGTQMIAKGLDFPNVTLVGVINADTALHLPDFRAAERTFQLVTQV 619 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIV 639 AGR GR G V++QT P+HP ++ + Y F + L +R PP+T+ +IV Sbjct: 620 AGRTGRGELGGRVLVQTFSPDHPAIEAAVDHDYAKFVGRELPDRVAHGFPPFTTLLRLIV 679 Query: 640 R--AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 R +E + A + + + L+ + +LGP P + G++R+ L Sbjct: 680 RGDSESKTREFATMAAESWKKLLEAKQCEHR---ILGPAPCAVARLRGKFRFHALATSVD 736 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L+ + T PD V+WV+DVD I+ Sbjct: 737 SDTLRATFREASSTWKT-PDD--VQWVIDVDAID 767 >UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7K8_9BACT Length = 743 Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust. Identities = 272/751 (36%), Positives = 389/751 (51%), Gaps = 36/751 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M +A V + V L + FDYL+PE + +K G VRVPFG R G V+S++D+S+ Sbjct: 1 MAIAKVIIDVSLDKEFDYLIPETLLPQIKVGVMVRVPFG-HSTREGYVLSLADSSDYTGG 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + + ++ + L W ADYY + LP +R G+ Y Sbjct: 60 RLKPITGLCETRANIPEHLVTLGRWMADYYCCSQEQSIRTLLPAAVRSGKIKPRIRRLYR 119 Query: 119 FATEQG--QAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATL--EFNDAALQALRKKG 172 A V N K S + L A L G D + +L F+ + L L + Sbjct: 120 IADVAAAESFVACNGTKPSAALRVDLVKALLAHGAQPADSLKSLVPAFSQSGLNTLIRNK 179 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATA---VGAIHSAADTFSAWLLAGVTGSG 229 + + E + ++ + + L + +Q A +G + + LL GVT SG Sbjct: 180 IVETVEEIVRRDVFGDSHVLPSKPLPPSADQKKALELIGKMLLGETSSHVLLLHGVTNSG 239 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVYL + GK A+V+VPEI LTPQT+ RFR RF + VLHS L+D ER W Sbjct: 240 KTEVYLQAIAKAREMGKSAIVLVPEISLTPQTVRRFRARFGDQLSVLHSRLSDGERFDEW 299 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + NGE I +G RSALF PF+NLG+I++DEEH+SSYKQ E RY ARD+AV R E Sbjct: 300 NRINNGEVQIAVGARSALFAPFRNLGLIIVDEEHESSYKQSEAPRYSARDVAVMRGKLEG 359 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAP---- 405 +ILGSATP+ ET N K+ L R+ + N ++D Q++ P Sbjct: 360 AVVILGSATPSAETSYNASTGKFLLARMAAQVDNKLAPRVTIVD---QRLAGPPEPGKSN 416 Query: 406 ----ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 ALIT + ++ Q I+FLNRRG+A ++C +CG+ A CP C YT + + L Sbjct: 417 FFSKALITAVFDRMRRGEQSIIFLNRRGYARVMICEECGFEARCPDCSVAYTYSRQRETL 476 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH C P CP C S + G+GTE++E +F I+R+D DT Sbjct: 477 TCHLCGGVIPAYELCPQCLSPKIRYAGVGTEKIESLAGAVFKPARIARMDSDTMRGADDY 536 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E L RG ILIGTQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQV Sbjct: 537 EAVLERFRRGELDILIGTQMIAKGLHFPNVTLVGIVNADLGLSMPDFRAPERTFQLITQV 596 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV-- 639 AGRAGR +GEV++QTH+PE+ +Q + +D F++ L R+++ PP+T +IV Sbjct: 597 AGRAGRGDIRGEVIIQTHNPENETIQYAAQQDFDGFSKFDLEFRQLLAYPPYTHLIIVHF 656 Query: 640 RAEDHNN--QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 R ED + + A F +L+ E + GP PA + G++R+ ++++ S Sbjct: 657 RGEDESMVVEFANGFTAELQR------YGHEGIRFAGPSPAPIERIKGKFRYMLVIRG-S 709 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 R++L LAL P + V+ +DVD Sbjct: 710 RLKLLRQALRVLALHRQPP--KGVEVYVDVD 738 >UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=2 Tax=Peptococcaceae RepID=A5D1C1_PELTS Length = 746 Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust. Identities = 269/733 (36%), Positives = 399/733 (54%), Gaps = 32/733 (4%) Query: 14 RTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE--LKAVVEVLDS 69 R F Y +P + G V VPFG + G VV +P E +K + V+D Sbjct: 21 RVFHYAIPPDYRDKIAVGSMVTVPFGNRH-LTGYVVGFG----IPPGEVRIKEIAGVIDE 75 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHAL-PILLRQGRPAANAPMWYWFATEQGQAVD 128 PVFT + L W A+ Y + L P L + A+ ++ A + + Sbjct: 76 GPVFTPELLELARWMAENYLCSTAEAFARILSPRLQVKASRRADVLVYPALAGAEMEKA- 134 Query: 129 LNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 L+ L RSPKQ L AA G + A + + AL KKGL +++ P + Sbjct: 135 LSLLGRSPKQLAVLQKAAGCPGLTKSELAAAAMTSSKTVDALLKKGLLKVSAVMPAYLQD 194 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 + L LN +Q A+ I ++ D F +LL G+TGSGKTEVYL + L Sbjct: 195 APGDMIKTGSLTLNQDQEAALREISASLDRGRFDVFLLHGITGSGKTEVYLRAIAAALET 254 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 G+QA+ +VPEI LTPQ + FR RF V VLHS L+ ER W + K G+A++V+GTR Sbjct: 255 GRQAVALVPEISLTPQMVELFRGRFGGQVAVLHSALSGGERYQEWRRVKEGQASVVLGTR 314 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL 364 SA+F P G+ +IDEEH+ SYKQ + RYHAR++A+ RA ++LGSATP+LE+ Sbjct: 315 SAVFAPCPRPGLFIIDEEHEPSYKQDDHMRYHAREIALKRAQLAGAVVVLGSATPSLESF 374 Query: 365 CN-VQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAG----LAPALITRMRQHLQAD 418 V Y+LL+L RR + RP + V+DL+ Q+++ G + L+ + L+ Sbjct: 375 SRAVSGGPYKLLKLPRRV-DERPLPRVRVIDLR-QEIREGNRGIFSRPLLYALNGCLERG 432 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLNRRG++ ++C +CG + +CPRCD T H + LRCH+C+ +P CP Sbjct: 433 GQAILFLNRRGYSTVVVCRECGLVLKCPRCDISLTYH-LEGRLRCHYCNHLAVLPGLCPG 491 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CGS ++ G GT+++E+ +FP I R+D D+T++KG+ ++ L G ILIG Sbjct: 492 CGSRYIRHFGAGTQKVEEEARKIFPKARIVRMDSDSTAQKGSHQKILDAFRDGLYDILIG 551 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG P VTLV +++ D AL DFR+AER QL TQVAGRAGR G GEV++QT Sbjct: 552 TQMIAKGLDLPGVTLVGVINADTALHMPDFRAAERTFQLLTQVAGRAGRGGLPGEVLIQT 611 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHNN-QHAPLFLQQ 655 + PEH + Y+ F +A RR++ PP++ + ++ ED + ++ Sbjct: 612 YSPEHYSISAAAAHDYEGFYRSEMAVRRVLGYPPFSHLARLLFTHEDEEEVRKGAEKSKE 671 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 L + ++S + ++ +LGP PA K G +RWQ++L+ R ++ II LA + Sbjct: 672 LLDRLVSG--RNCRVEILGPAPAPLSKIKGHFRWQLVLKGRRRENIKEIIREGLA---EL 726 Query: 716 PDSRKVKWVLDVD 728 R+ K ++VD Sbjct: 727 ERDRRFKVAVNVD 739 >UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44 Tax=Bacilli RepID=Q38XT7_LACSS Length = 805 Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust. Identities = 222/555 (40%), Positives = 340/555 (61%), Gaps = 13/555 (2%) Query: 186 WRTNYAVSGE---RLRLNTEQATAVGAIHSAADTFSA--WLLAGVTGSGKTEVYLSVLEN 240 +R YA + + ++ L +EQ TAV A+ +A T ++ +L+ GVTGSGKTEVYL ++ Sbjct: 253 YRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTGSGKTEVYLQTIDA 312 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VL QGK AL++VPEI LTPQ + R + RF V VLHSGL++ E+ W + + EA +V Sbjct: 313 VLQQGKTALMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYDEWRRIERKEARVV 372 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +G RSA+F P +++GVI++DEEH++SYKQ E RYHARD+A++R+ P+ILGSATP+ Sbjct: 373 VGARSAVFAPLEDIGVIIMDEEHEASYKQDESPRYHARDVAIWRSQYHNCPVILGSATPS 432 Query: 361 LETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQ--AGLAPALITRMRQHLQA 417 LE+ Q+ Y L+RLT+R A PA++ V + +VQ + +PAL+ +++ +Q Sbjct: 433 LESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFSPALLAGIKERMQK 492 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q +L LNRRGF+ ++C DCG++ +CP CD TLH H ++CH+C + +P+ CP Sbjct: 493 GEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCHYCGHEEAIPKICP 552 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SC S + G GT+++E L L P I R+D DTT +KGA + L + A IL+ Sbjct: 553 SCQSRQIRYFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKLLKKFGDHEADILL 612 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG FPDVTLV +++ D AL DFR++ER QL TQV+GRAGRA K G+V++Q Sbjct: 613 GTQMIAKGLDFPDVTLVGVINADTALGLPDFRASERTFQLLTQVSGRAGRADKVGQVIVQ 672 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 +++ E+ +Q Y+ F + +A R PP+ + V+ + + A + + Sbjct: 673 SYNSENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPY--YFTVKVTVSHPEEALAAKKSFQ 730 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 P+ ++ +LGP P + R+ +QI++++ +LQ + L T D Sbjct: 731 IAKQMRPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAKLAEILE--TTQID 788 Query: 718 SRK-VKWVLDVDPIE 731 +R K LD +P++ Sbjct: 789 TRHGFKIGLDNEPLQ 803 >UniRef50_P57220 Primosomal protein N' n=4 Tax=Buchnera aphidicola RepID=PRIA_BUCAI Length = 726 Score = 417 bits (1071), Expect = e-114, Method: Compositional matrix adjust. Identities = 232/740 (31%), Positives = 392/740 (52%), Gaps = 26/740 (3%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + V LP+P+ + F YL+P+ M G R+ VPF ++ IGIV S + + Sbjct: 1 MIIVKVILPIPIRQYFTYLMPDFMCPIIGGRILVPFN-SKDVIGIVASFYKKNNVDQANF 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + ++D+E ++++ V ++ W ++ YH P G++ F LP +L N + W Sbjct: 60 KHIKALIDTESLYSNMVLDIISWISNNYHCPAGNLFFSILPKILHSDYIIKNKYICQWSI 119 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 T++GQ ++LN KR KQ L L++ I ++ + L+ L + LC + Sbjct: 120 TKKGQELNLNYFKRRKKQLYVLLILKKKHILSTELKKYNISKIILKKLEIQELCKV---- 175 Query: 181 PEFSDWRTNYAVS--------GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 NY +S ++L N + + + + FS+WLL V K + Sbjct: 176 ------NLNYKISFKRKIIRTKKKLFFNKKISIVLNDV-LKKQCFSSWLLTRVNLYLKVK 228 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER-FNAPVEVLHSGLNDSERLSAWLK 291 YL ++++VL +G Q L++VP I TIA F E+ FNA ++V+HS L S+ S W++ Sbjct: 229 FYLGLIQSVLYKGVQILILVPYIK-NINTIAFFLEKYFNASIDVMHSKLTSSKYFSNWVR 287 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 KNGE +IVIGT ++F PF LG+I++ EEH+ YK RY+ RDL + RA+ E+IP Sbjct: 288 TKNGENSIVIGTGKSIFLPFLKLGLIILLEEHNLKYKSINQCRYNIRDLGILRAYKEKIP 347 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 IIL S TP+L+TL NV +K ++L + + ++++LK +K++ GL+ LI + Sbjct: 348 IILDSETPSLKTLNNVLHRKCFYIKLNK-YNHVNQINNNIINLKTEKIKFGLSLTLINEI 406 Query: 412 RQHLQADNQVILFLNRRG-FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 ++ QV+L N+ F L+C C I +C CD Y+ ++Q ++ L C C Q Sbjct: 407 YKNFTGK-QVLLIFNKFVLFFFVLMCQKCNEIFKCTNCDDYFEINQYRNILFCKFCLIQI 465 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P C +CGS L+ +G E++++ + +FP +P + K L + E Sbjct: 466 KKPIFCYNCGSFSLIVFKIGAEEIKKEMHSIFPKIPFFFFLNEKNINKNILNTKSFEFAI 525 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 I+I T+ L + ++FP V L++L+ +D S ++R+ E FAQ Y + K Sbjct: 526 SSPCIIIVTEELVQNYYFPHVKLISLICIDNYFLSFNYRAMEYFAQFYINLNQLTRSTKK 585 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 ++ +QT P L+ + GY +F+++A+A R+ LPPW+ IV + N ++ Sbjct: 586 SCKIFIQTSFPNDINLKEICNNGYFSFSKKAMAIRKSFLLPPWSFQTIVYSASTNTKYNI 645 Query: 651 LFLQQLRNLI-LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 +FL +R ++ S + LWVLGP A ++ Q+L+Q SRV L +++N ++ Sbjct: 646 IFLSLMRKILQKKSRKYNCFLWVLGPNNAFLSINKHKYFHQLLIQCSSRVALNNVLNESI 705 Query: 710 ALINTIPDSRKVKWVLDVDP 729 +IN S++VKW +D++P Sbjct: 706 DVINIFTISKRVKWFIDIEP 725 >UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVR6_BACS4 Length = 809 Score = 416 bits (1069), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/539 (37%), Positives = 324/539 (60%), Gaps = 9/539 (1%) Query: 197 LRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPE 254 L L +Q A+ I + + +LL GVTGSGKTEVYL ++ L GK+A+++VPE Sbjct: 270 LPLTEQQTVALSPIINTLENNKHETFLLRGVTGSGKTEVYLQAIDKALKLGKEAIMLVPE 329 Query: 255 IGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNL 314 I LTPQ + F++RF + V VLHS L+ E+ W + ++ + + +G RSA+F PF+NL Sbjct: 330 ISLTPQMVTHFKQRFGSEVAVLHSALSKGEKYDEWRRIRDKKVKVAVGARSAIFAPFENL 389 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 G+I+IDEEH++SYKQ+E RYHARD+A+ R P+ILGSATP+LE+ ++ Y L Sbjct: 390 GIIIIDEEHETSYKQEEAPRYHARDVAIKRGEHYSCPVILGSATPSLESYARAKKSVYHL 449 Query: 375 LRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGF 430 L +T R N + +++D++ +++++G + LI M ++ Q++LFLNRRG+ Sbjct: 450 LTMTTRVNNVQMPSVNIIDMR-EELRSGNRSMFSEPLIEAMINRIEKQEQIVLFLNRRGY 508 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 + +LC DCG++AECP CD T H+ L+CH+C P CPSC + G G Sbjct: 509 STFILCRDCGYVAECPHCDISLTYHRTNQTLQCHYCGHVETPPNVCPSCEGDSIRFFGSG 568 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 T+++E+ L + GV + R+D DTT RKG+ E+ L + RG A +L+GTQM+AKG FP+ Sbjct: 569 TQKVEEELNKVLSGVRVIRMDVDTTRRKGSHEELLNKFGRGEADVLLGTQMIAKGLDFPN 628 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 +TLV +L D L DFRSAER QL TQV+GRAGR K+GEV++Q++ P+H +Q + Sbjct: 629 ITLVGVLAADSMLHIPDFRSAERTFQLLTQVSGRAGRHQKKGEVLIQSYTPDHYSIQDVK 688 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + +F E+ + R+ PP+ +++ D + + +++ I SS D Sbjct: 689 QHDFVSFFEKEMKIRKQAGHPPYYYLILIHVSDTDLGNTVSVAEKISKFIKSSVSPD--T 746 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +V GPV + P+ R+R+Q ++++ + ++ L + + + ++D +P Sbjct: 747 YVYGPVTSAIPRIKDRYRYQCMIKYKVEPNITVVLQEVLKTYQSEMNKSDLSIMIDTNP 805 >UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XL83_CALS8 Length = 723 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 255/738 (34%), Positives = 390/738 (52%), Gaps = 51/738 (6%) Query: 12 LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLD 68 + RTFDYL+P + V+ G RV V FG + G++++V + + + +LK V+ V+D Sbjct: 15 VDRTFDYLVPGHLEELVEVGKRVYVNFGVSNRVVEGLIINVKEDTNVEREKLKCVLAVID 74 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVD 128 P+ + +L +YY +G L +P P + Y +Q + Sbjct: 75 KIPIVSDEQIKLAFSIKNYYATKLGQALGLIIP-------PFVSNNEIYIICAQQTSDLT 127 Query: 129 LNS---------LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRK--KGLCDLA 177 L LKR LA K D++A+L F L+ K K L + Sbjct: 128 LEDELKEIYNRILKRPVSANSKLA-----KENEDKIASL-FLRGLLRFELKLLKSLNEEK 181 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYL 235 ETP ++ L +Q A+ I S D + LL GVTGSGKTEVY+ Sbjct: 182 RETPTEPQYK-----------LTKDQKKALELITSTFDKGIYKNILLFGVTGSGKTEVYI 230 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 + V+++GK ++MVPEI LTPQ I + R + V V HS +N S+R AWLK K+G Sbjct: 231 QAMRYVISKGKSVILMVPEISLTPQMIQNVKRRIESEVVVYHSKMNSSQRQRAWLKLKSG 290 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 EA +VIG RSA+F P K LG+I++DEEH++SYK ++ R +A ++A RA IPI+LG Sbjct: 291 EAKVVIGPRSAIFAPAKELGLIIVDEEHETSYKSEKSPRVNAVEVAQMRAKINSIPIVLG 350 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMR 412 SATP +E KY + L R A P + V+D+K + + + L++ + Sbjct: 351 SATPTVEHYYYAIAGKYAICTLRERINKALPEV-FVVDMKKEILDGNKSIFSRLLLSEIE 409 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 ++LQ QV+LFLNRRG++P ++C +CG++ C C T H+ +LRCH+C+ ++ Sbjct: 410 KNLQRGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-DGYLRCHYCNYKQEY 468 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 CP CGS ++ G GT+++E + F + R+D+DTT+RK A+E+ L++ Sbjct: 469 TSICPKCGSKYVRQYGSGTQRIEDEIKTYFKDARVLRMDKDTTTRKDAVEEILSKFKSKE 528 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 A IL+GTQM+AKG HFPD+TLV +++ D L DFRS ER QL TQVAGRAGR KQG Sbjct: 529 ADILVGTQMVAKGLHFPDLTLVGVINADTILNMPDFRSKERTFQLITQVAGRAGRE-KQG 587 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 VV+QT +P+ + Y++F E+ + R+ M PP++ V N A Sbjct: 588 RVVIQTFNPDDYSIVAASNHDYESFFEEEIKIRKTMGYPPYSYIVNFIVVSQNEGFAKKG 647 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 ++ + L L L + GP + K ++R+ IL++ ++ I N +I Sbjct: 648 IENVYRL-LEKCTKIVNLKIYGPSESPIFKVENQYRYHILVKFEKASQMIDIAN----MI 702 Query: 713 NTIPDSRKVKWVLDVDPI 730 + + ++DV+PI Sbjct: 703 KERYNYNNAELIIDVNPI 720 >UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBV0_PARUW Length = 745 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 258/746 (34%), Positives = 397/746 (53%), Gaps = 31/746 (4%) Query: 3 VAHVALPVPLPRTFDY-LLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A V L + + +T DY ++P + + G RV VP + R G +V + S + Sbjct: 7 IASVILDISIDKTLDYGIVPSQLEAAQKGSRVEVPV-RGHSRTGYIVEIKSDSNF--KNI 63 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-RPAANAPMWYWF 119 K + +L P+ +++L LW A YY P+ D+ LP +R+G + + Sbjct: 64 KPITRLLSETPLVPEELFKLALWVAKYYCAPLRDIFRIILPPSVRKGMKEKEQLFVVRGK 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQ---GKIWRDQVATLEFNDAALQALRKKGLCDL 176 + E + V ++ ++ P Q L + Q G + + + + +++ +L K+ L L Sbjct: 124 SKEILRQVCVDIREKKPAQASVLEVMLQVKNGILLSKLLEESKSSRSSVLSLAKQQL--L 181 Query: 177 ASETPEFSD---WRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKT 231 ET + +Y ++ ++ LN +QA A+ I ++ A F L+ G+TGSGKT Sbjct: 182 IVETIKIDRSPLVDEDYFMTKPKI-LNEDQAVALNKIDASLNAKIFQTHLIHGITGSGKT 240 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+YL +E L K +++VPEI LT QTI RFR RF + +LH L++ ER W K Sbjct: 241 EIYLQAIEKALKLEKGTIMLVPEISLTAQTIQRFRSRFAEKIAILHHRLSEGERRDEWHK 300 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQI 350 + G A I++G RSA+F+P NLG+I++DEEH+ SYKQ E Y ARD+AV R Q Sbjct: 301 IREGRAKIIVGARSAIFSPVVNLGLIIVDEEHEQSYKQNEMSPCYQARDVAVMRGKLAQA 360 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGLAPA 406 ++LGSATP+LE+ N KY L L +RA A ++D++ + K + Sbjct: 361 TVVLGSATPSLESYYNALNGKYALSVLHKRADVATLPDVTIVDMRKEFERAKTLTSFSEV 420 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L++ + + + QVILFLNRRG+ LLC DC I +C C+ T H +HL CH C Sbjct: 421 LLSGIERRQKQGEQVILFLNRRGYHTTLLCQDCSHIVKCTHCEIPLTFHLGDNHLSCHLC 480 Query: 467 DSQ-RPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 Q P P++CPSC G+ HL G GTE +E+ L +FP + RID DTT KG+ ++ Sbjct: 481 GYQISPPPKECPSCRGTKHLKFRGAGTEHVEKALHAIFPQIRTMRIDADTTKHKGSHQKL 540 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L + G A +LIGTQM+AKG HFP+VTLV +L+ D L DFR++E QL TQVAGR Sbjct: 541 LRDFGTGKADVLIGTQMIAKGLHFPEVTLVGVLNSDAGLNIPDFRASETIFQLITQVAGR 600 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 +GR +GEV++QT PE+ +Q + Y F E+ +A R M PP++ + Sbjct: 601 SGRGVTKGEVIIQTSMPENSTIQHAAKQDYAGFYEEEIAVREMFHYPPFSHLAKLTFSGK 660 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQH 703 Q+ R L++ + + PV P K +R+Q LL+ PS + L Sbjct: 661 QPDQTYEIAQKFRELLI---FQLPQHYEFNPVIPCGYAKIKDLYRYQFLLRGPSMIPLNL 717 Query: 704 IINGTLALINTIPDSRKVKWVLDVDP 729 ++ L+ +++K +D++P Sbjct: 718 VLEN---LMQKFSIPKEIKLFVDINP 740 >UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K0_NATTJ Length = 749 Score = 414 bits (1063), Expect = e-114, Method: Compositional matrix adjust. Identities = 251/743 (33%), Positives = 399/743 (53%), Gaps = 36/743 (4%) Query: 12 LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDS 69 L R F Y + + V G V+VPFGK+ +V V+ + L +++K V +VL Sbjct: 16 LDRQFTYKITPHLESRVTRGSLVKVPFGKRNVN-AVVNEVTGTTSLSKDKIKNVNQVLSD 74 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW--YWFATEQGQAV 127 +P+ + L W + YY L A I++ QG + ++ Y + +A Sbjct: 75 QPL-PEDIMELAQWMSSYYLCS----LSKAYNIMVPQGLKSGVNRIYKKYVSIADITEAR 129 Query: 128 DLNSLKRSPKQQQALA-ALRQGKIWRDQV-ATLEFNDAALQALRKKGLCDLAS------- 178 L ++PKQ++ L L + DQ+ L+ + +++L KG+ ++ S Sbjct: 130 KLLDSAKAPKQRKVLERLLSNSPLALDQLLDELKITKSPVESLYGKGIINIQSSRSYREP 189 Query: 179 -ETPEFSDWRTNYAVSGERLRLNTEQATAVGAI-HSAADTFSAWLLAGVTGSGKTEVYLS 236 + + +++ ++ L + G+ +++ +LL GVTGSGKTE+YL Sbjct: 190 IDFKQIEEYKPKEPTQAQKTVLKLIKNQGRGSCDNTSPKKPKPFLLFGVTGSGKTEIYLQ 249 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 ++E+ L QG Q +V++PEI LTPQTI RF RF V V HS L+ ERL W K G+ Sbjct: 250 LIESYLQQGLQTIVLIPEISLTPQTIERFVGRFGNQVAVTHSKLSHGERLDQWEKMLWGK 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+G RSA+F PF NLG+I+IDEE + SYKQ+E RYHAR++A R + ++LG+ Sbjct: 310 ANIVVGPRSAVFAPFSNLGLIIIDEEQEGSYKQEELPRYHAREVAERRCQFKDGQLLLGT 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMR 412 ATP+LE++ V+ Y L L R G+ V+D+K ++ Q G + LI +++ Sbjct: 370 ATPSLESIHRVKSDDYNLAELPERVGDVELPDISVIDMK-EEFQKGNKSVFSRELILKLK 428 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 + Q ILFLNRRG++ LLC +CG+ CPRC+ T H++ + L CH+CD P+ Sbjct: 429 EVTDKGEQTILFLNRRGYSTFLLCRECGYTVTCPRCEVTLTYHKSINQLLCHYCDYTEPL 488 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 + CP C S + G GT+++E+ L P + R+D DTT +K + ++ L + Sbjct: 489 SKFCPDCNSDKIKEFGTGTQKIERELKKYLPDLKTIRMDVDTTRKKNSHQELLGKFKNKQ 548 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR--AGK 590 A +LIGTQM+AKG FPDV+LV ++ D AL DFR+ E+ QL TQVAGRAGR + Sbjct: 549 ANVLIGTQMIAKGLDFPDVSLVGIITADTALNLPDFRAGEKTFQLLTQVAGRAGRRDNNQ 608 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +G+VV+QT++P+H ++ + + F + LA R+ + PP+ + + Q Sbjct: 609 RGQVVIQTYNPDHYSIEAVKNENVRKFTGEELALRKKLGYPPFKRMIRIMLRSPYEQAVS 668 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHIING 707 +++ LS L D VLGP P PK +RW ++L+ + + + + + Sbjct: 669 HQVEE-----LSQKLQDMGYEVLGPTPCPIPKIKDEFRWHLMLRLDLNNQEIIDEQLRDY 723 Query: 708 TLALINTIPDSRKVKWVLDVDPI 730 L N + K++ +DVDP+ Sbjct: 724 LLTTKNNLSQQGKIRMAIDVDPL 746 >UniRef50_UPI00016C01EC Primosomal protein N (replication factor Y) - superfamily II helicase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01EC Length = 745 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 252/739 (34%), Positives = 393/739 (53%), Gaps = 33/739 (4%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQE-RIGIVVS-VSDASELPLN-ELKAVVEVLD 68 + + F Y+LPE + G RV VPFG + IG +++ VSD ++ ++K V+EVLD Sbjct: 15 IDKPFTYILPEHLNALVGSRVMVPFGPLNKLTIGYLINIVSDEQITNIDFKIKTVIEVLD 74 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAV- 127 EP+ ++ + +YY + LP + + A A + + QA+ Sbjct: 75 EEPILNQEQLEMVKFLVEYYGSSYAAAISTLLPPIDKHDIKTAVATTEFLYKAADDQAIL 134 Query: 128 -DLNSLKRSP---KQQQALAALRQ--GKIWRDQVATLEFN-DAALQALRKKGLCDLASET 180 LN + S Q + L L Q G+I + TLE N ++++ +L K L Sbjct: 135 QYLNKISHSKTFANQAKILNFLLQNDGQIVSELKNTLELNTNSSINSLLKLKLIKRV--- 191 Query: 181 PEFSDWRTNYA--VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 F R + + L LN+EQ A I S +D + +LL GVTGSGKTEV+L ++ Sbjct: 192 --FWQVRVQHMPICYDKFLPLNSEQQQAYDQISSCSD-HNTFLLEGVTGSGKTEVFLHLI 248 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 + + +G+ +V+VPEI LT QT+ RF ERF + V + HS L +R +L+AK Sbjct: 249 RDAVERGESVIVLVPEIALTRQTVNRFTERFGSRVALTHSKLTPRKRREIYLQAKIQNVQ 308 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IVIG RSA+F P L +I+IDEEHD SYK +++A ++A+ R Q +IL SAT Sbjct: 309 IVIGPRSAVFMPLPRLSLIIIDEEHDGSYKSDMVPKFNAIEIAIERMKHHQGKLILASAT 368 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL--- 415 P+LE+ Y L+L +RA NA ++D++ +++ AG L R+ + Sbjct: 369 PSLESYYQATLGIYEYLKLNQRAKNATMPTISIVDMR-EELAAGNTKILSRRLHNAIVDT 427 Query: 416 -QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 QV++ LNRRG + + C CG++A+C CD +T HQ L CHHC +Q VP Sbjct: 428 VTQGKQVMILLNRRGHSTFISCRSCGYVAKCAYCDQPFTYHQKNKLLICHHCLNQIQVPT 487 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP CGS ++ G GT+++E+ L F I+R+D DT S+K LE L + +G + Sbjct: 488 TCPECGSKYMQFFGNGTQKIEEYLMMHFSHYGIARMDLDTVSKKNELETLLQDFEKGATK 547 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 +L+GTQM++KGH F +VTLV ++ D L+ DFR+AE+ QL TQ GR+GR QG+V Sbjct: 548 LLVGTQMISKGHDFSNVTLVGIISADSLLYIPDFRAAEKTYQLITQTLGRSGRGADQGKV 607 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPLF 652 ++QTH P++ +L + F + L R++M PP+ V++ +ED + Sbjct: 608 IIQTHSPQNDVLINIQNGSQPQFYKSELITRKIMGYPPYNHLFSVMISSEDEQS-----V 662 Query: 653 LQQLRNLI-LSSPLADEKLW-VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 +Q ++ L + +KL+ +LGP A PK ++RW+I++ R L + Sbjct: 663 IQNIKKLFAYYTHYNKKKLFRLLGPTAATMPKLANKFRWKIMIIGQPRDILLFYGRYCID 722 Query: 711 LINTIPDSRKVKWVLDVDP 729 N +K+ + D+DP Sbjct: 723 KFNEYEKPKKINIIWDIDP 741 >UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHU0_DESAH Length = 815 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 222/541 (41%), Positives = 321/541 (59%), Gaps = 12/541 (2%) Query: 199 LNTEQATAVGAIHSAADT-FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGL 257 L EQA V + S D FS +LL+GVTGSGKTEVYL ++ + +G+ ALV+VPEI L Sbjct: 273 LMDEQAGVVNQVISEMDKGFSRYLLSGVTGSGKTEVYLRLVTEAMDRGQGALVLVPEISL 332 Query: 258 TPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVI 317 QT RFR RF + VLHSGL ERL W + G+A IVIG RS++F P NLG+I Sbjct: 333 ISQTERRFRARFGKKIAVLHSGLTMGERLDQWNRIMTGDAVIVIGVRSSVFAPINNLGII 392 Query: 318 VIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 ++DEEHD+SYKQ+ G RY+ARD+AV RA E IP++LGSATP++++ NV + +++ L+L Sbjct: 393 IVDEEHDTSYKQETGLRYNARDIAVVRAKIENIPVVLGSATPSVQSYYNVCEGRFKELKL 452 Query: 378 TRRAGNARPAIQ-HVLDLKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 T+R N P + ++DLK K ++ + P L + L+ Q ++FLNRRGFA Sbjct: 453 TKRV-NCHPLPEIELVDLKRYKDFRGIERIITPELSRGIGHCLERGEQALIFLNRRGFAT 511 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 +C C +C CD TLH + RCH C + + CP+C + + P+G GTE Sbjct: 512 YPVCQACNEPVKCKFCDLTMTLHMDTNEFRCHLCGFSMSMNQPCPNCNARRIKPLGFGTE 571 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E L LFP ++R+D+DT S+KGA+ L +V I+IGTQMLAKGH FP +T Sbjct: 572 RIENMLQVLFPDARVARLDQDTGSKKGAMVSILKKVKHRTVDIIIGTQMLAKGHDFPFIT 631 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV ++ D +L DFR+ ER QL QVAGRAGR ++G VV+QT++PEH ++ + Sbjct: 632 LVGVICADLSLNFPDFRAGERTFQLLAQVAGRAGRGDRKGRVVMQTYNPEHFSIEASKNQ 691 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRA----EDHNNQHAPLFLQQLRNLILSSPLADE 668 + F + + R+ + PP + + ++ +D HA ++ + L+ Sbjct: 692 DFVEFYHKEIPFRKGLGYPPVSRIIQLKISGLDKDKVKVHALFVGEECKRLVDQDRENGH 751 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + +LGP+ A PK R+RWQILL+ P L ++ LA + R+V +DVD Sbjct: 752 LVQILGPIEAGIPKIAMRYRWQILLKSPRATLLNRLVRAMLAEKKVFAN-REVTVGIDVD 810 Query: 729 P 729 P Sbjct: 811 P 811 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 5/99 (5%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +A+ +P+ TF Y LP + +A G RV VPFG ++ ++ + +E + K Sbjct: 8 EIAVALPVHGTFTYTLPLDLAAEAIPGMRVLVPFGNRRVTGYVLGPGHENTEF---KAKP 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 + +LD P+F ++ L W +DYY HP+G+V+ ALP Sbjct: 65 IQGLLDEAPLFPPAMIELFRWVSDYYIHPLGEVIKAALP 103 >UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium RepID=B1YIQ3_EXIS2 Length = 774 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 226/587 (38%), Positives = 344/587 (58%), Gaps = 17/587 (2%) Query: 150 IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERL--RLNTEQATAV 207 +W + + L+ + L +L KKG+ + ET + + + V + L T Q AV Sbjct: 196 LWSEVMHELDLTVSILNSLEKKGV--ITVETIDVNRNPYEHLVQDIFVPSTLTTHQQDAV 253 Query: 208 GAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRE 267 AI ++ +T S +LL GVTGSGKTEVYL + +L +G+QA+++VPEI LTP + RF+ Sbjct: 254 DAITASEET-STFLLHGVTGSGKTEVYLESIHTMLQRGRQAILLVPEISLTPMMVKRFKR 312 Query: 268 RFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSY 327 RF V VLHSGL+ E+ W K +GE +V+G RSA+F P N+GVI++DEEH+++Y Sbjct: 313 RFGDRVAVLHSGLSLGEKYDEWRKISHGEVDVVVGARSAIFAPLTNIGVIILDEEHETTY 372 Query: 328 KQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPA 387 KQ+E RYH RD+A +RA + P++LGSATP LET Q+ YR L L R G P Sbjct: 373 KQEENPRYHTRDVATWRAAYHKCPVVLGSATPILETYARSQKGVYRYLPLKERFGGELPP 432 Query: 388 IQHVLDLKGQKVQAGLAP---ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAE 444 ++ ++D++ + ++ P L+ ++Q ++ Q +L LNRRG+ +LC DCG + Sbjct: 433 VE-IIDMRKELERSNRTPFSLPLVEGIKQRIERGEQTVLLLNRRGYTTFVLCRDCGETLQ 491 Query: 445 CPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG 504 CP C T HQ Q L+CH+C + +P+ CPSC S + G GT+++E+ LA L P Sbjct: 492 CPHCAVNLTYHQHQDCLKCHYCGFEAAMPKTCPSCESKKIRQFGTGTQKIEEELAHLIPE 551 Query: 505 VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF 564 I R+D+DTTSRKGA E+ L RG IL+GTQM+AKG FP+VTLV ++ D L Sbjct: 552 AKIIRMDQDTTSRKGAHEKLLNAFERGEGNILLGTQMIAKGLDFPNVTLVGVIAADATLG 611 Query: 565 SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 DFR++ER QL TQV+GRAGR G+ ++QT++P+H ++QT Y+AF ++ + Sbjct: 612 IPDFRASERTFQLITQVSGRAGRGALAGQSIIQTYNPDHYVIQTAKRHDYEAFYQREMQL 671 Query: 625 RRMMQLPP-WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKR 683 R++ PP W ++ + H + L L + L V GP+ A + Sbjct: 672 RKLGGHPPFWFLGLVTISAAHPLEAQAEAEAIAGEL---RHLESDDLIVNGPLEAPLARL 728 Query: 684 GGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +R+Q++L+H + ++ + LAL +KV+ +D++P Sbjct: 729 KNMYRYQVILKHKGQEEVREALRAMLAL----RIKQKVQVTVDLNPF 771 >UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=Lactobacillales RepID=Q03FY4_PEDPA Length = 806 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 209/507 (41%), Positives = 307/507 (60%), Gaps = 9/507 (1%) Query: 195 ERLRLNTEQATAVGAIHSAADTFSA--WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 + L LN EQ +A I A + +A L+ GVTGSGKTEVYL ++ V+ +GK AL++V Sbjct: 266 QNLALNEEQQSAYNLITQAIEDKNAKPILVEGVTGSGKTEVYLQSIQQVIKKGKTALLLV 325 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTP + R R RF V VLHSGL+D E+ W + E +V+G RSA+F P + Sbjct: 326 PEISLTPLMVKRVRARFGTQVAVLHSGLSDGEKFDEWRRIVRNEVKVVVGARSAVFAPLR 385 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 N+G+I+IDEEH +YKQ + RYHARD+A++RA + P++LGSATP+LE+ V++ +Y Sbjct: 386 NIGIIIIDEEHSETYKQSDAPRYHARDVAIHRAKKFECPVVLGSATPSLESRSRVERGRY 445 Query: 373 RLLRLTRRAG-NARPAIQHVLDLK---GQKVQAGLAPALITRMRQHLQADNQVILFLNRR 428 +++ +RA A P IQ V+D++ G + ++ +R + QV+L LNRR Sbjct: 446 DFVKIQKRANQKALPNIQ-VIDMRQHLGDGYNENFSAPMVEEIRHRILRKEQVVLMLNRR 504 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 GF+ ++C CG++ CP CD T+H +RCH+C + +PR C +CGS + G Sbjct: 505 GFSSFVMCRTCGFVLTCPNCDVSLTMHMDSRTMRCHYCGHEEAIPRLCKNCGSDKIRFFG 564 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GTE+++Q LA + P + R+D DTT RKGA E+ L A IL+GTQM+AKG F Sbjct: 565 TGTEKVQQQLAEIIPEARVLRMDVDTTRRKGAHERLLERFGNHEADILLGTQMIAKGLDF 624 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 PDVTLV +L+ D AL D R++ER QL TQVAGRAGRA K GEV++QT +P+H ++ Sbjct: 625 PDVTLVGVLNADTALELPDLRASERTFQLLTQVAGRAGRADKTGEVLIQTFNPDHYAIRL 684 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 + Y+ F + + R + + PP+ V+V D + + A ++ N+I P Sbjct: 685 AQKQDYEDFFYKEMYLRHLGKYPPYYYTVLVSVSDRDERQALKNAYEMLNII--QPQLSA 742 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQH 695 VLGP K ++ +QIL+++ Sbjct: 743 NAIVLGPTAKSISKIKQKYYYQILIKY 769 >UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID=B1IIM2_CLOBK Length = 735 Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust. Identities = 231/703 (32%), Positives = 383/703 (54%), Gaps = 37/703 (5%) Query: 10 VPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASELPLN-ELKAVVE 65 + L + F Y +PE + ++ G RV+VPFGK ++I G V+ + + E +K++ Sbjct: 14 IKLDKLFTYAIPEELNKKIRIGHRVKVPFGKGNKKIDGFVLKLYENYEDENKVSIKSISN 73 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 + + +P+ + L+ + Y + + +P + +G + + +G+ Sbjct: 74 ICEEDPLLDLNRVNLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKKENFIFIYKDLEGK 133 Query: 126 AVDLNSLKRSPKQQQALAALRQGKIWRDQV--ATLEFNDAALQALRKKGLCDLASETPEF 183 LK + +Q L G ++ V F+ +++ L K G ++ Sbjct: 134 Y-----LKENYEQIYNFIKLNDG-VYNKNVLNKKFGFSLSSINTLIKHGFLIQKNQVVN- 186 Query: 184 SDWRTNYAVSG--ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 R N + G E LN +Q+ A+ I ++ +L+ GVTGSGKTE+Y+ +++ + Sbjct: 187 ---RYNEKIYGNYEEKILNGDQSLALYRILNSNRKL--FLIHGVTGSGKTEIYMHLVKKL 241 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 + + K ++++VPEI LTPQ + RF+ RF + + HS L++ ER W++ K GE + I Sbjct: 242 IEKDKDSIILVPEISLTPQMVERFKGRFGKSIAIFHSKLSNGERFDEWMRVKRGEVKVAI 301 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSA+F PFKNLG I+IDEEH+SSYK +Y+ARD+A R +E +ILGSATP+L Sbjct: 302 GARSAVFLPFKNLGTIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKVILGSATPSL 361 Query: 362 ETLCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQA 417 ET + K L+ + R G + P ++ ++D++ + + + L + L+ Sbjct: 362 ETYYRSKNKIIDLITIKERIEGASMPEVK-IVDMREELMSGNKSIFSRELFEDISTRLEK 420 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q+ILFLNRRGF+ + C +CG++ +C CD T H + LRCH+C + +P+QCP Sbjct: 421 KEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGASTRIPKQCP 480 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C S ++ G GTE++E+ + FP V R+D DTT K A E +G A ILI Sbjct: 481 KCNSKYVKYFGAGTEKVEKAIKKCFPKVKTLRMDLDTTRTKDAYENIYNTFKKGEADILI 540 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG F +VTLV +L D +L D+RS ER QL TQV+GRAGR K+G+V++Q Sbjct: 541 GTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKKEGKVLIQ 600 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 +++PE+ + + Y+ F + + R+ M PP++ +++ N + + ++ Sbjct: 601 SYNPENYSIASAAKSDYEGFYNKEIKIRKDMNYPPFSKILLI------NLSSKYENKLIK 654 Query: 658 N-----LILSSPLAD-EKLWVLGPVPALAPKRGGRWRWQILLQ 694 N +IL + L+ + L +LGP P+ K +RWQI+L+ Sbjct: 655 NTHKVGIILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILK 697 >UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6V7_GEMAT Length = 767 Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust. Identities = 274/717 (38%), Positives = 376/717 (52%), Gaps = 32/717 (4%) Query: 5 HVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VAL VPL RTF Y +P G+ V G RV VPF + E IGI + A E LK Sbjct: 13 EVALAVPLFRTFTYTVPAGIAWPVAVGSRVLVPFRNRAE-IGICLGPGTAPEG--VRLKP 69 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR---PAANAPMWYWF 119 +V V+DSEP + W AD+Y PIG L LP LL Q + P A Sbjct: 70 IVSVVDSEPSLPGPLIDTAQWIADWYAAPIGLTLRGMLPTLLLQTKTPTPRAKTQRVVRV 129 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAA--LQALRKKGLCD 175 E + +QQ+ + L QG + ++ N A + A+ K+G+ + Sbjct: 130 VQELPSLLQREQTFARARQQRVVYDLLEAQGGVAPVDALLVQANCTAGVIVAMVKRGIVE 189 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + E E D N A + Q A+ AI A D +LL G+TGSGKT VY+ Sbjct: 190 VKQEVVE-RDPFANRAGVAPPPEPSASQRAAIAAI-LAGDPGQVFLLHGITGSGKTLVYI 247 Query: 236 SVLENVLAQ-GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 VL VL Q G+ A+V+VPEI LT QT+ RFR F V VLHS L+D ERL AW + Sbjct: 248 EVLRAVLQQPGRTAIVLVPEIALTSQTVDRFRGAFGDSVAVLHSALSDGERLDAWQSLRR 307 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GE I +G RSALF P + +GV+++DEEH+ SYKQ E RYHAR+ A+ RA +E ++L Sbjct: 308 GERRIAVGARSALFAPLERVGVVIVDEEHEGSYKQAETPRYHAREAAIVRARAEGALVVL 367 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG-QKVQ-AG---------- 402 GSATP+LE+ + + L L RAG A ++D++ K++ AG Sbjct: 368 GSATPSLESWERANRGQATRLTLPDRAGGASLPPVQLVDMRAVTKIERAGRAPHAPYDPM 427 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 L+PAL+ + + Q +L LNRRG+A L CH CG + CP C T H+ Sbjct: 428 LGVLSPALLKAIESRMVRGEQTLLLLNRRGYAAYLQCHACGDVQVCPHCSISLTYHRVPE 487 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L CH+C Q VP C CG+ + G+GT+Q+E+ +A FP I+R+D DTTS K Sbjct: 488 ALICHYCQYQAVVPTHCAHCGTESIRRRGMGTQQVERLVAERFPEARIARMDVDTTSGKW 547 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 A Q L V RG IL+GTQM+AKG FP+VTLV ++D D L DFR++ER QL + Sbjct: 548 AHTQILDRVGRGEVDILLGTQMIAKGLDFPNVTLVGVVDADTGLNLPDFRASERTFQLLS 607 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHV 637 QVAGRAGR K GEV++QT P+ ++ L Y F ++ L R++ PP+ ++V Sbjct: 608 QVAGRAGRGPKGGEVIVQTRMPDAHAVRHALTHDYLGFVQEELEARQVPAYPPFVGIANV 667 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 +V + + L A + ++GP P + RWRW L++ Sbjct: 668 VVSGTHQHLVAEAAIAAAVWVRALLERHAIAGVSIVGPAPCPIDRIKDRWRWHFLVK 724 >UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Polynucleobacter necessarius RepID=A4SUT7_POLSQ Length = 709 Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust. Identities = 266/766 (34%), Positives = 396/766 (51%), Gaps = 104/766 (13%) Query: 3 VAHVALPVPLPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V V + PL + FDYL G + G V VPFG+ +GIV+ VSD S+ L++ Sbjct: 6 VVQVVVDKPLAQGFDYLWDSNQLGNDPEVGQLVEVPFGRA-SLVGIVIKVSDHSDYELDK 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK++ V P F + RL+ +A+ YY H +G+ + +P MW Sbjct: 65 LKSITRVAPLPP-FDAASLRLVNFASQYYIHALGETIIPTIP------------QMW--- 108 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 K+ ++AL + A E +Q +GL D A Sbjct: 109 -------------KKPDNWEKALEKIS---------AAEEKKRKKIQQEPSEGLIDEA-- 144 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIH--SAADTFSAWLLAGVTGSGKTEVYLSV 237 LN QA A+ + S F LL G TGSGKT V+L+ Sbjct: 145 ------------------HLNQGQALALEKLRQCSVEKEFKTILLQGQTGSGKTAVFLNW 186 Query: 238 LENVLAQGK-QALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNG 295 L+ +L Q L++VPEI LTPQ R R F + + VLHSG+++ R AW +A G Sbjct: 187 LKGILEDSSSQVLLLVPEINLTPQLERRVRAYFPDKKMVVLHSGVSEKNRGIAWYEAMTG 246 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 +A I++GTR A TP NL IV+DEEHD SYKQQ+G RY ARDLA++RAH +IP++L Sbjct: 247 KAQIILGTRLAALTPLPNLRAIVVDEEHDPSYKQQDGIRYSARDLAIWRAHDLKIPVLLA 306 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAP---------A 406 SATP+LE+ + +Y +RL +RA A A+ V + + Q+ +P + Sbjct: 307 SATPSLESWIAAKAGRYEYIRLDQRAQGA--ALPQVRLINTRDPQSQFSPGDIGRPISAS 364 Query: 407 LITR-----MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA---- 457 LIT+ + ++L+ Q ++ +NRRG+AP L C+ C W+++C +C Y +H+A Sbjct: 365 LITKTLANAISKNLENKKQSLILINRRGYAPILSCNACTWLSKCQQCSSYMVMHKAGALG 424 Query: 458 -QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 + L CHHC +P+P CP CG+ L +G GT+++E + ++P + R+D D + Sbjct: 425 RRPVLSCHHCGLVKPIPEHCPDCGNADLKTLGKGTQKIEDAIEEMWPSARVLRVDTDASR 484 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER-FA 575 + E+ E+H G I++GTQM+AKGH + ++ LVA+LD D LFS DFR+AER FA Sbjct: 485 KSKGAEELFQEIHAGNVDIVVGTQMIAKGHDYQNIGLVAVLDADSRLFSPDFRAAERLFA 544 Query: 576 QLYTQVAGRAGRAGKQ----GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 QL QVAGRAGR+ K GE+ ++T +PE + Q LL D F ER +LP Sbjct: 545 QL-VQVAGRAGRSSKDDQGAGEIYIETQYPEAAVFQYLLRHDVDGFLGYLAHERDEAKLP 603 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P++ +V AE + A FL L+ + S L L V PVP + G R Q+ Sbjct: 604 PFSYQGLVHAEAKSLDKAIQFLAALKGRLKSRGLMTPGLKVYDPVPRAVMRVAGTERAQL 663 Query: 692 LLQHPSRVRLQHII--------NGTLALINTIPDSRKVKWVLDVDP 729 +L+ R +LQ ++ NG+ I+ +++W+++ DP Sbjct: 664 VLEADDRRQLQDVLEAVDQDLRNGSQGRISK---GDRIRWLIERDP 706 >UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5758 Length = 800 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 273/758 (36%), Positives = 402/758 (53%), Gaps = 40/758 (5%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGC--RVRVPFGKQ-QERIGIVVSVSDASELPLNEL 60 A V PL + Y +P + K G RV VPFGK + G V V+D E+ Sbjct: 47 ADVVFDRPLDHAYTYAVPAELVAKIGVGKRVEVPFGKGGKATAGFCVRVTDDEPTSGYEI 106 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V VLD + + + +L W ADYY G VL +P +R A M + Sbjct: 107 KTVTRVLDDDAIVDEHLMKLTRWMADYYLCGWGQVLHAVVPAGVRDN---AGTRMASFVE 163 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD--QVATL-EFNDAALQALRKKGLCDLA 177 +++ +P+Q+ AL L++ + Q+A L + + L KKGL Sbjct: 164 PVPRESLPNPLPTVTPQQKAALDKLKKENRPLEILQLARLAKCTAGVVSGLIKKGLVRKF 223 Query: 178 SETPEFSDWRTNYAVSGE----------RLRLNTEQATAVGAIHSA--ADTFSAWLLAGV 225 SE E + + E + LN +Q I A A + +LL GV Sbjct: 224 SERIETEASGAHESAESENAQGTDEARKEIELNADQLRVWKPIGEALAAGGYHPFLLHGV 283 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKTEVYL +E V+ QGK+ +V+VPEI LTPQTI+RF+ R + V+HS L D+ER Sbjct: 284 TGSGKTEVYLRAIEEVVKQGKEVVVLVPEISLTPQTISRFQGRCGN-LAVMHSHLTDAER 342 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 W + G +V+G RSA+F P + LG+I+IDEEH++S+KQ+ RYHARD+AV RA Sbjct: 343 GGYWRRIATGHIHVVVGARSAVFAPTRKLGLIIIDEEHENSFKQESTPRYHARDVAVMRA 402 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAG-- 402 E IPI++GSATP+LE+ N ++ Y +L + R A PA++ V+DL+ + G Sbjct: 403 RLEGIPILMGSATPSLESWANAEKGNYTVLSMPNRVASRPMPAVK-VVDLRHEPKAPGKP 461 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + P L MRQ L+ Q+IL LNRRGF+ + C CG++A+C CD T H+ ++ Sbjct: 462 GAIGPTLEAAMRQTLKDKGQIILLLNRRGFSTHVHCEACGYVAQCANCDLAMTFHRTKNS 521 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L CH+C + ++CP+C + GLGTE+L+ + FPG R+D DT S+ G+ Sbjct: 522 LMCHYCGFETAPFQKCPTCAQPSMRYQGLGTEKLQVEIEEKFPGSVCQRMDSDTMSKPGS 581 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 ++ L G +IL+GTQM+AKG FP+VTLV +++ D L DFRSAER QL Q Sbjct: 582 HQRVLDAFRDGLIQILVGTQMIAKGLDFPNVTLVGVVNADVGLHLPDFRSAERTFQLLAQ 641 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW--TSHVI 638 VAGRAGR + G+V++QT PEHP + + Y+ FA+ L R++ + PP+ + +I Sbjct: 642 VAGRAGRGTRGGQVLVQTFTPEHPCITLASHHNYNEFAKMELVHRKLHKYPPYERMARMI 701 Query: 639 VRAEDHNNQH------APLFLQQLRNLILSS-PLADEKLWVLGPVPALAPKRGGRWRWQI 691 VR+E A F + +R + + P + + +LGP + +R+ Sbjct: 702 VRSEKEEAAAAFADVLATAFKEAIRRAMSTGRPSPEAPVRLLGPAECPVFRLNNFYRFHF 761 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 LQ S L ++ LAL V++ +D+DP Sbjct: 762 QLQSDSSAVLHEVLRNVLALAKP---PHGVEFQVDIDP 796 >UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=A6BZI9_9PLAN Length = 800 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 264/750 (35%), Positives = 403/750 (53%), Gaps = 31/750 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGK-QQERIGIVVSVSDASE-LPLN 58 +A + L P+ R F Y +PE + ++AG RV+VPFG+ Q G V V E LP Sbjct: 57 LAEIVLNRPVDRVFHYKVPEELRPLLRAGHRVQVPFGRGNQLAPGYCVGVGPGDENLPSV 116 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK+V +LDS P+F + +L W AD Y G VL +P ++ + + Sbjct: 117 RLKSVEAILDSRPLFNAKMLKLTRWIADRYLCSWGQVLDCVVPAGVKN-QAGTRMVTVFE 175 Query: 119 FATEQGQAVDLNSLKRSPKQQQAL-AALRQGK--IWRDQVA-TLEFNDAALQALRKKGLC 174 G+A +++ P +Q+A+ AL+ + D++ E + +L+KK + Sbjct: 176 VVPVPGEAEQNEIIEKLPAKQRAVYDALKSAARPLTLDELTQAAECGSGPVNSLKKKAVI 235 Query: 175 DLASETPEF----SDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGS 228 + ++ D + + L+LN +Q A+ I +A ++L GVTGS Sbjct: 236 SSHQKRMQYFENDDDVVHAHIQKQDDLKLNRDQRLALDQILTAIRGQQSETFVLHGVTGS 295 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY+ + V++ G+QA+V+VPEI LTPQ I RFR RF++ V VLHS L DS+R Sbjct: 296 GKTEVYIQAIREVVSYGQQAIVLVPEISLTPQAIQRFRSRFDS-VAVLHSHLTDSDRHYH 354 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W G+ +++G RSA+F P +LG+I+IDEEH++S+KQ+ RYHAR++A R+ E Sbjct: 355 WQNIAAGKVQVIVGARSAVFAPAPHLGLIIIDEEHETSFKQETAPRYHAREVARKRSELE 414 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLAP 405 ++P+ILGSATP L + V +KK L+ + RR + +++D++ + + Sbjct: 415 RVPLILGSATPTLNSWLRVIEKKDTLISMPRRVNDLPMPNVNIIDVRNDVQIRRNESIGR 474 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L T M+ L A QVILFLN RG++PAL C CG +CP C+ T H+ ++ CH Sbjct: 475 VLFTGMQHALGAGGQVILFLNLRGYSPALWCKGCGNSVKCPHCEISLTWHRDKNLAVCHS 534 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 CD P CP CG+ L VG GT++LE+ + FPG R+D DT G+ + L Sbjct: 535 CDFSAKPPTNCPGCGAPGLRFVGAGTQRLEEEVKAKFPGYSCQRMDSDTMRGVGSHARVL 594 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 G IL+GTQM+AKG FP+VTLV ++D D L D ++ER QL QVAGR Sbjct: 595 NAFAGGEVDILLGTQMIAKGLDFPNVTLVGVVDADTMLHQPDLFASERTFQLIAQVAGRT 654 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR + G V +Q+ P P + + FA L R+ M PP++ + V Sbjct: 655 GRGMQGGRVFVQSASPTEPAIVKAADHDFLGFARLELGHRKEMLAPPFSHYARVILRGPQ 714 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWV--LGPVPA--LAPKRGGRWRWQI-LLQHPSRVR 700 +H F +QL ILS ++++L V LGP PA + K+ R+ +Q+ L+ ++ Sbjct: 715 EEHVEHFARQLAT-ILSDAASEKQLQVQILGPAPAPIIRLKKYFRYHFQLAALEVDQILQ 773 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L H + G L P + +++++DVDP+ Sbjct: 774 LWHEVEGKL------PREKGIEYIIDVDPV 797 >UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXH1_9BACT Length = 762 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 253/750 (33%), Positives = 402/750 (53%), Gaps = 39/750 (5%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 A V +PL + F Y +P + + G RV+ PFG + G V ++ + + K Sbjct: 24 AEVVFNIPLNKLFHYSVPPDLRELLTPGMRVKAPFG-NKVITGFCVGLTTIPSV--YKTK 80 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP-------AANAP 114 ++ +LD+ P+ ++ R+ W + YY G+ + +P ++R+G P Sbjct: 81 DLMGILDAFPLADETMLRITKWLSSYYCCGWGEAIHAVIPPVVRRGAKEKIDIFVTCGKP 140 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAAL----RQGKI-WRDQVATLEFNDAALQALR 169 + T + L S KR+ KQ + L L + +I +D + N + L+ L Sbjct: 141 L-----TAFEKETILQSKKRAIKQARVLEFLFNQAQNTEIRAKDLMKATGGNMSMLRQLE 195 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTG 227 ++ L L + + S + L L+ EQ A I S LL G+TG Sbjct: 196 RENLLRLEERQADAVNALKGGGASRQHLALSEEQQAAFTLIKEKLSEPSQGIILLHGITG 255 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTE+YL + +L QGK+AL +VPEI LT Q+I R +ERFN V VLHS L + + Sbjct: 256 SGKTELYLQTIAKLLEQGKKALFLVPEISLTSQSIQRIKERFNN-VAVLHSHLQGAFHHA 314 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W K G +V+G RS++F P K++G+I++DEEH+++YKQ+ RY+ARD+A+ RA Sbjct: 315 QWKDIKEGRVDVVVGARSSIFAPLKDVGLIILDEEHENTYKQENSPRYNARDIAILRATY 374 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLKGQKVQAG---L 403 E +ILG+ATP+LE+ ++ Y + L++R G + P ++ V L+ + + G + Sbjct: 375 ENAMVILGTATPSLESYYEAEKGDYTKIVLSKRIGTLQLPQVEIVDMLEEVRKKRGYHVV 434 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 + L M+Q L QVILFLNRRGF P + C CG++ +C RCD T H+ + + C Sbjct: 435 SQRLEYYMKQALSRREQVILFLNRRGFTPYIHCKRCGFVLKCHRCDIPLTFHKKLNIVLC 494 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H+C ++ P CP C + ++ G GTE++E+ +A FPG I R+D D+ G+ E+ Sbjct: 495 HYCHAEAIPPESCPDCMANYINYRGFGTEKIEEVIAKKFPGYNILRMDSDSMRSHGSHEK 554 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L G +IL+GTQM+AKG FP+VTLV ++ D L DFR+ ER QL +QVAG Sbjct: 555 ALKAFGEGEFQILLGTQMIAKGLDFPNVTLVGVISADTMLNLPDFRAGERTFQLISQVAG 614 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW--TSHVIVR- 640 R GR K G V++Q+ +P H + Y+ FA++ L RR + PP+ + +I R Sbjct: 615 RTGRGQKGGRVIVQSFNPRHYSITYAAAHDYEGFAKKELEYRRPLNYPPFGRMARIIFRG 674 Query: 641 -AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 +E + + A + +L+ + S + +L +LGP PA K +RW +LL+ Sbjct: 675 ASEKNTEEKASVIAGKLKEIAKES---NNQLQILGPSPAPVMKINNLFRWHLLLKAKDH- 730 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 Q I + L + +T+ ++ V+ ++DVDP Sbjct: 731 --QRIHDALLCVADTLKPTKGVQSLVDVDP 758 >UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MD21_RHOM4 Length = 828 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 242/599 (40%), Positives = 332/599 (55%), Gaps = 34/599 (5%) Query: 155 VATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA- 213 +A + + A L+ L + G+ +L + S + + EQ A+ I A Sbjct: 236 LARADASPATLRRLVELGVLELVEKEVIRSPLEAEPVPKAAPVTFHPEQQAALDRITEAI 295 Query: 214 -ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP 272 A F +LL GVTGSGKTEVY++ L+ V AQG+ +++VPEI LTPQT+ RFR F Sbjct: 296 EARRFETFLLHGVTGSGKTEVYIAALKRVRAQGRTGIILVPEIALTPQTVRRFRAHFGDE 355 Query: 273 VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE- 331 V VLHS ++D ER W + + G IVIG RSA+ P +NLG+IV+DEEH+ SYKQ + Sbjct: 356 VAVLHSRMSDGERYDTWRQLRAGRYPIVIGPRSAVLAPLENLGLIVVDEEHERSYKQFDP 415 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQH- 390 RYHARD+AVYRA+ +LGSATP+LE+ N + KY LL + RRA PA+ H Sbjct: 416 APRYHARDVAVYRAYLNGAVCVLGSATPSLESYLNARSGKYTLLEMRRRA----PAVGHT 471 Query: 391 --------VLDLKGQKVQAG--LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 ++DL+ ++ G LAP L + Q L+ QVIL NRRGFAP L C +CG Sbjct: 472 PARLPSVRLVDLRHTRLVNGNPLAPPLARAIAQRLERGEQVILLQNRRGFAPVLECAECG 531 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 W CP C T H+ QH LRCH+C P C CG+ L P+G+GT+++E+ L Sbjct: 532 WSPHCPHCSVTLTYHKVQHQLRCHYCGYATRHPGTCRQCGAAALEPLGIGTQRVEEALRA 591 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 LFP + R+D DTT + A + L RG A IL+GTQM+AKG FP VTLV +++ D Sbjct: 592 LFPEARVLRMDLDTTRGRRAHHRLLDRFARGEADILLGTQMVAKGLDFPRVTLVGVVNAD 651 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 L DFR+ E QL QVAGRAGRA + GEV+LQT +P+H + + LL Y A + Sbjct: 652 TGLLLPDFRADEHTFQLLMQVAGRAGRADRPGEVLLQTRNPDHRVFRYLLRHDYAGLARE 711 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF-------LQQLRNLILSSPLADEKLWVL 673 LAER + PP+ ++ + QQ+ + L D L Sbjct: 712 LLAERHQLGYPPYARLAVLECSGPDEARVAELARSWTEHFQQVCHQHAGGHLID----TL 767 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVR---LQHIINGTLALINTIPDSRKVKWVLDVDP 729 GP PAL + GR+R+ +L++ P R LQ ++ L +P R + LD+DP Sbjct: 768 GPTPALHERLKGRYRYHVLVKVPRRTGAPPLQPLLRQALETFPPLP--RAYRLTLDIDP 824 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 4/101 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEG--MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + VALP+PL + F Y +P V+ GCRV VPFG++ G+VV L + L Sbjct: 7 IVQVALPLPLLQVFSYRVPPEWREAVRPGCRVLVPFGRRH-LTGVVVPELPPDPL-PSPL 64 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 K +++VLD P T + RL W ADYY G+V+ ALP Sbjct: 65 KPILDVLDDTPALTDELLRLTRWMADYYVCGWGEVIRAALP 105 >UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organisms RepID=A1TVM2_ACIAC Length = 763 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 243/568 (42%), Positives = 322/568 (56%), Gaps = 41/568 (7%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ--GKQALVMVPEIG 256 L+ EQ A AI + F LL G TGSGKTEVYL ++ LA Q LVMVPEI Sbjct: 199 LSAEQQAATDAIAARPGPF---LLYGSTGSGKTEVYLRCVQQALAADPSAQVLVMVPEIN 255 Query: 257 LTPQTIARFRERFNAP------VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 LTPQ ARF RF AP V LHSG+ +RL +WL A G+A IV+GTR A+F Sbjct: 256 LTPQLEARFLARF-APLYGADSVVSLHSGMTHPQRLKSWLAAHAGQARIVLGTRMAVFAS 314 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE-------- 362 L +IV+DEEHD+SYKQQEG RY ARDLA++R + +ILGSATP+LE Sbjct: 315 LPGLALIVVDEEHDASYKQQEGARYSARDLAIWRGREQDAKVILGSATPSLESWHASRPP 374 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 T + + RL +R A P ++ ++D+ Q A +P L+ + + ++ Q + Sbjct: 375 TDGDPGGRYLRLHMPSRIGAGALPRVR-LVDMAQQPRGAVFSPPLVAAITERVERGEQCL 433 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 + LNRRGFAP L C +CGW ++CP C + H+ LRCHHC + VP CP CG+ Sbjct: 434 VLLNRRGFAPVLHCTECGWKSDCPHCSAHQVFHKIDRSLRCHHCGFAQRVPYACPGCGNP 493 Query: 483 HLVPVGLGTEQLEQTLAPLFPGV--------PISRIDRDTTSRKGALEQQLAEVHRGGAR 534 + P+G GTEQLE+ LA L V ++RID DTT KGALE+QLA+VH G Sbjct: 494 DIAPIGRGTEQLEEQLAALLRNVITPERRAARVARIDADTTKAKGALEEQLAQVHAGEVD 553 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR------- 587 +L+GTQM+AKGH F +TLVA + DGALFS+DFR+ ER L Q AGRAGR Sbjct: 554 VLVGTQMVAKGHDFRRITLVAAVQPDGALFSSDFRAPERLFALLMQAAGRAGRDAGYVAA 613 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G E+ +QT+HP+H + L Y AFA + LAER +PP+ +VRA+ + Sbjct: 614 QGGACEMWVQTYHPDHAVYAALRRHDYPAFAARQLAERAEAAMPPFAFQALVRADARTQE 673 Query: 648 HAPLFLQQLRNLILSSPLAD-EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 A FL + L E++ V PVP + R Q+LL+ PSR LQ + Sbjct: 674 VAQTFLAACAEAARQAGLPGLEQVTVFPPVPLAIQRVANVERAQMLLESPSRAALQRFLA 733 Query: 707 GTLALINTI---PDSRK-VKWVLDVDPI 730 L++ P R V+W++DVDP+ Sbjct: 734 AWQPLLHACRADPAHRGLVRWLVDVDPL 761 >UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZW59_OPITP Length = 745 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 263/745 (35%), Positives = 377/745 (50%), Gaps = 51/745 (6%) Query: 18 YLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTH 75 Y +P+ M V+ G VRVP + R+GIV + + P+ +LKAVVEVL P T Sbjct: 17 YKVPDPMRDAVQVGSLVRVPVLRTM-RLGIVGEIGVPKDFPVEKLKAVVEVLHPFPALTP 75 Query: 76 SVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRS 135 + +L W A YY + V+ LP +R+G + + +L L++ Sbjct: 76 ELLQLARWMAGYYACGVDSVIETMLPAAVRRGATVKHEKSLAL--VRRLTPDELTVLEKK 133 Query: 136 PKQQQALAALRQGKIWRDQVATLEFND-----AALQALRKKGLCDLASETPEFSDWRTNY 190 QQ L L + +R Q+ +L + A AL K+G E + ++ Sbjct: 134 APQQARLYRL-LAQQFRPQLKSLVLSRLGVTAAVATALIKRGFVREELRRVERVAYADDF 192 Query: 191 A----VSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 A V+ + LN EQA V + S F LL GVTGSGKTEVYL ++ L Sbjct: 193 AHGELVAAQPHTLNPEQAAVVADLESRLGEQKFGVALLHGVTGSGKTEVYLRGIDTTLKA 252 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVE-----VLHSGLNDSERLSAWLKAKNGEAAI 299 G L +VPE+ LTPQT+AR R R A V HS L+D ER WL GEA I Sbjct: 253 GGGVLFLVPEVALTPQTVARLRSRLEAIAPGHRCVVWHSHLSDGERFDGWLALATGEARI 312 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+G RSA+F P NL +I++DEEH+ +YKQ E RYH RD+AV RA +LGSATP Sbjct: 313 VVGARSAVFAPVANLRLIIVDEEHEPAYKQDETPRYHGRDVAVMRAKLTGAFCVLGSATP 372 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGLAPALITRMRQHL 415 +LE+ N KYRLL LT+R N + V+DL+ + ++ L+ L+ M+ Sbjct: 373 SLESFANALAGKYRLLTLTQRVDNRQLPNIDVVDLRIEAMKHRSLTALSDKLVNAMQARF 432 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q ILF+NRRG++ ++LC CG + ECP C T H+A LRCH C Q+ P + Sbjct: 433 ERREQTILFINRRGYSSSMLCTKCGHVEECPHCSIAMTYHRADEMLRCHLCGEQKAAPAR 492 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP CG+ + GLGT+++E+ + + P I R+D D ++K + L++ G + Sbjct: 493 CPQCGAPDIRWRGLGTQRVEEAVRRVLPRARIERMDTDAMAKKNRFREVLSQFRAGKIDV 552 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+ KG FP+VTLV L+D D ++ DFR+ ER QL QVAGRAGR + G+VV Sbjct: 553 LVGTQMIGKGLDFPNVTLVGLIDADMSMHIPDFRANERTFQLLVQVAGRAGRGDRAGDVV 612 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT P+ +Q + FAE L R+ PP+ + N + F +Q Sbjct: 613 VQTFTPQAEAIQFSRRADFAGFAESELKLRKEFHYPPYRHLIHHLFRGPNPEKLKFFAEQ 672 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 L+ + + + GP + K +RWQ+ T A+I + Sbjct: 673 WARLVEKE--LGQIVELRGPSASPIEKIKDEYRWQLWY-------------FTHAVIKVV 717 Query: 716 PDSRKVK----W------VLDVDPI 730 P K++ W VLDVDP+ Sbjct: 718 PALAKLRAGFAWPDDITQVLDVDPV 742 >UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacteria RepID=A8ST73_9FIRM Length = 754 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 241/706 (34%), Positives = 380/706 (53%), Gaps = 31/706 (4%) Query: 12 LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQE-RIGIVVSVSDASELPLNELKAVVEVLD 68 + R F Y++PE + ++ GC+V +PFG+ R G V+ +SD +E ++K + V Sbjct: 17 IDRAFQYVIPEKLVSQIRTGCQVNIPFGRGNTMRTGYVIGISDRTEYDRTKIKTIDSVCT 76 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW-FATEQGQAV 127 + L W + Y G + +AL ++ + + + Y A ++ + Sbjct: 77 EGIAAPGRLVALAGWIKENY----GSTMINALQTVMPVKKTVRSVVVRYVALAVDETDEI 132 Query: 128 DLNSLKRSPKQQQALAALRQGK--IWRDQV-ATLEFNDAALQALRKKGLCDLASET---P 181 + +KR+ + + L +G+ I +V L + A ++A++++G+ + ++ Sbjct: 133 EYKYMKRNARAKLRLLRTLKGENIIPMSKVTGELGVSSATVKAMQEEGVITVTEDSCYRK 192 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLE 239 SD A + LN Q + + D +LL GVTGSGKTEVY+ + Sbjct: 193 VTSDAVRKEAFMAPDIELNDIQMSIINEFQDDVDKDVHRTYLLHGVTGSGKTEVYVQCIR 252 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 V+ QGKQA+V++PEI LT QTI F F V V++S L+ ER + +AK G+ + Sbjct: 253 RVIEQGKQAIVLIPEIALTYQTIKYFTRYFGERVTVVNSRLSSGERYDQFERAKKGDVDV 312 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIG RSALFTPF+ LG+I+IDEEH+SSYK +YHAR+ A+ RA E +ILGSATP Sbjct: 313 VIGPRSALFTPFERLGLIIIDEEHESSYKSDNPPKYHARETAIERARLEGASVILGSATP 372 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-----GQK--VQAGLAPALITRMR 412 ++E+ ++RL + R + + A ++DL+ G + + LA + R+ Sbjct: 373 SVESYKKAMSGEFRLWTMDERVSDRKMADTSIVDLREELRRGNRSIISDELAEDITDRLS 432 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH--HLRCHHCDSQR 470 +H Q++LF+N+RGF + C +CG + +CP CD T H A + L CH+C Sbjct: 433 RH----EQIMLFINKRGFNSFVSCRNCGEVVKCPHCDVSMTKHMASNGGKLVCHYCGYTV 488 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P +CPSCGS + G+GTE++EQ + +FP R+D+DTTS+K + EQ L R Sbjct: 489 EEPSKCPSCGSRLIGGYGVGTEKVEQEINRMFPVARTLRMDKDTTSKKNSHEQILESFGR 548 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A ILIGTQM+ KGH F +VTLV +L D LF D+R+ ER L TQ AGRAGR Sbjct: 549 GDADILIGTQMIVKGHDFANVTLVGILLADLTLFDGDYRAGERTFDLLTQAAGRAGRGDV 608 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G+VV+QT+ P++ + + Y +F E A R M+ PP + +++ A + + Sbjct: 609 PGKVVIQTYKPDNYAIVAAANQDYRSFYETESAYRSFMRYPPEWNMLVIMAVGEDEEQLA 668 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQH 695 + ++ + I + + L V+GP PALA K +R + ++H Sbjct: 669 NTMDRMYSHIRGNHMNVRHLAVIGPAEPALA-KVKDLYRKVLYIKH 713 >UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria RepID=PRIA_SYNY3 Length = 831 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 287/813 (35%), Positives = 406/813 (49%), Gaps = 99/813 (12%) Query: 7 ALPVPLPRT---FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELK 61 A+ V LP+ + Y +P G+TV+ G V VPFG QQ GIVV +LP ++K Sbjct: 26 AVLVDLPQNEGVYTYAIPPGLTVQDGDIVAVPFGNQQLG-GIVVGCLTKLPPDLPPEKIK 84 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP----------ILLRQGRPAA 111 + +V+ S F WRLL W A+YY + V+ ALP I L R + Sbjct: 85 PIQDVIVSG-FFAPHYWRLLHWLAEYYCTELITVIRMALPPGLLQRSQRRIKLNGDRLPS 143 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG-----KIWRD------------- 153 + P++ + QG L L+ S + + LRQ K RD Sbjct: 144 DWPLFLSQPSHQGARQILTLLQSSKEGDYSYRYLRQKVPGLTKALRDLLKRQWVESYLEP 203 Query: 154 ----------QVATLEFNDA---------ALQALRKKG----LCDLASETPEFSDWRTNY 190 V L F+ + L L+ +G L DL P + + Sbjct: 204 PKAVQPQLPKMVTLLNFDPSFKLTELQARTLIVLKNQGGEMWLADLLKAVPCSASTIQSL 263 Query: 191 AVSG-------ERLRL------NTEQATAVGAIHSAA-------DTFSAWLLAGVTGSGK 230 A G E+LRL N QA + A + LL GVTGSGK Sbjct: 264 AKKGLVAIAEREKLRLFQQPSINASQAPELTPAQKQACQTVLPLQGYHQVLLHGVTGSGK 323 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL + + L +G+ LV+VPEIGLTPQ RFR RF V V HSGL+ E+ W Sbjct: 324 TEVYLQICGDRLGKGQSVLVLVPEIGLTPQLTDRFRARFGNKVAVYHSGLSSGEKYDTWR 383 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ-QEGWRYHARDLAVYRAHSEQ 349 + G IVIGTRSA+FTP NLG+I++DEEHDSS+KQ Q YHAR +A RA EQ Sbjct: 384 QTLLGHEQIVIGTRSAIFTPLPNLGLIILDEEHDSSFKQTQLTPNYHARTVAQRRAELEQ 443 Query: 350 IPIILGSATPALETLCNVQQ-----KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG-- 402 P+ILGSATP+LE+ V + +++ L R P +Q ++D++ + Q Sbjct: 444 CPLILGSATPSLESWHTVHRHQNDPQRHYLELPERVQSRPLPPVQ-IVDMRAELKQGNRS 502 Query: 403 -LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD----HYYTLHQA 457 + AL T + + Q ILF+NRRG + + C CG++ ECP CD ++Y Sbjct: 503 IFSRALQTALGELKAKQQQGILFINRRGHSTFVSCRSCGYVLECPNCDVSLSYHYVQGNG 562 Query: 458 QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 Q LRCH+C+ P+ CP C S +L G GT+++ + L FP + R D DTT R Sbjct: 563 QPLLRCHYCNHAEIQPKVCPECSSPYLKFFGSGTQKVTEALTQEFPDLRWIRFDSDTTRR 622 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 KGA L + RG A +L+GTQML KG +TLV ++ D L AD+RSAER Q Sbjct: 623 KGAHRALLDQFQRGEADLLVGTQMLTKGLDLAQITLVGVVAADSLLNFADYRSAERGFQT 682 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 TQV+GRAGR + G+V++QT+ P HP++Q + Y F Q L +R M+ PP+ + Sbjct: 683 LTQVSGRAGRGEEPGQVIIQTYTPRHPVIQAVKTHNYHGFIAQELPQREMLNYPPYGKLI 742 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 ++R N + +Q + +L L + + +LGP PA + R+RWQ+L+++PS Sbjct: 743 LLRCLGTNEREVEKTIQAIA--VLCEQLLPKTVEILGPAPASILRIAQRYRWQLLVKYPS 800 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++ +I + P S V +DVDP+ Sbjct: 801 FIK---VILPLERIKQICPSS--VYLDIDVDPL 828 >UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY60_9FIRM Length = 750 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 253/743 (34%), Positives = 387/743 (52%), Gaps = 39/743 (5%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVLD 68 L R F Y +P + V+ G RV VPFG+ +E G VV++ ++ +++K ++ V + Sbjct: 20 LDRVFQYRVPLSLWKEVRPGSRVFVPFGRGNRETEGYVVAIRPEADYEESKIKEILRV-N 78 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVD 128 +E V SV L+ A + G + AL +L A P F T Sbjct: 79 TEGV---SVESELIKVASFLKEQYGSTMIQALRTVL--PVKAKMKPKEEVFITLSADIEA 133 Query: 129 LNSLKRSPKQQQALAALR-------QGKIWRDQ-VATLEFNDAALQALRKKGLCDLASET 180 L +Q+ +A R +G+I +++ V F ++ L ++G+ L S Sbjct: 134 AQKLLAEWEQKHYVARARFLFLLIEKGRITKEEAVKGCNFPLKEIRRLAEQGIVKLESRI 193 Query: 181 ------PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTE 232 PE + T + LN EQ D +LL GVTGSGKTE Sbjct: 194 KYRNPFPELTKRSTGWP-------LNEEQQAVADNFQKDYDNGKRGTYLLYGVTGSGKTE 246 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VYL+++E VLA+ KQ +V++PEI LT QT+ RF ERF + V++S ++ E+ A + Sbjct: 247 VYLALIEQVLAKKKQVIVLIPEISLTYQTVRRFYERFGERIAVINSRMSKGEKSDACERI 306 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 + GEA ++IG RSALF P + LG+I+IDEEHD +YK +YHAR+ AVYRA + Sbjct: 307 RAGEADVIIGARSALFAPTERLGLIIIDEEHDGAYKSDTSPKYHARETAVYRAGLCGASV 366 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALI 408 +LGSATP++E +Y+L L +RAGNA ++DL+ ++ + G + L Sbjct: 367 VLGSATPSVEAYARALSGEYKLWTLKKRAGNAMLPTTQIIDLR-EEFKKGNRSIFSGELH 425 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 ++ + L Q++LFLNRRGFA + C CG + +CP CD T H+ LRCH+C Sbjct: 426 KKIEERLAKKEQIMLFLNRRGFAGFVSCRACGQVIKCPHCDVTLTYHR-NGKLRCHYCGY 484 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + +QCP C S+H+ GLGTE++E L FP + R+D DTT RK A E+ LA Sbjct: 485 EETFIKQCPICKSSHVATFGLGTEKVEAALHAEFPTARVLRMDMDTTRRKHAHEEMLAAF 544 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 +G A IL+GTQM+ KGH + +VTLV +L D +L DFRS E+ QL Q AGRAGR Sbjct: 545 SKGEADILLGTQMIVKGHDYANVTLVGILAADLSLHEQDFRSGEKTFQLLCQAAGRAGRG 604 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K+G+V++QT+ PEH + T Y+ F ++ R++M PP +++ + + Sbjct: 605 DKRGDVIIQTYSPEHYSITTAAEHSYENFFKEEYTYRQLMGYPPCAHMLVILVQSGDESQ 664 Query: 649 APLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 + + ++ +I S + E + +L P A K +R + L+H + L + Sbjct: 665 SVVARLRIEKMIEQSQVGQEVPVQILAPGQASLSKLKDVYRQVLYLKHKDKETLLDLKRR 724 Query: 708 TLALINTIPDSRKVKWVLDVDPI 730 ++ P + D DP+ Sbjct: 725 LEPVLEKHPMFAGITIQFDFDPL 747 >UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I505_DESAP Length = 735 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 278/744 (37%), Positives = 391/744 (52%), Gaps = 37/744 (4%) Query: 4 AHVALPVPLPRT---FDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A + + +PL R + Y +PE + G RV VPFG++Q G VV S+ + Sbjct: 7 AEIVVDLPLSRVDQVYHYAVPERFRTELCLGSRVLVPFGRRQ-LAGYVVGFR--SQAAVE 63 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ++K +++VL S+P FTH ++ L W A+ Y AL + R A Sbjct: 64 QVKDILDVLSSQPAFTHELYTLARWMAERYLCTTA----QALQCIAAPSRGAGPRYEEGV 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQG-KIWRDQVATLE-FNDAALQALRKKGLCDL 176 +A G + D L +PKQ+Q +R+ + R QVA L + L +KG+ Sbjct: 120 YAAPGGGSADQERL--TPKQRQVWRTVREHPGLTRAQVAALSGVTPVVVARLLEKGVLT- 176 Query: 177 ASETPEFSDWRTNYAVS---GERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKT 231 T S R Y VS E RL EQ A+ AI A +LL GVTGSGKT Sbjct: 177 ---TSRRSVARNPYPVSQTITELPRLTGEQLRALEAIEKGFQAQRKEFFLLHGVTGSGKT 233 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+YL L QG+Q LV+VPEI L Q I +F+ RF V VLHS L ER W + Sbjct: 234 EIYLRAAAGALVQGRQVLVLVPEITLATQLIHQFKARFGDLVAVLHSRLGAGERYDEWNR 293 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 GEA IV+G RSA+F P +N+G+ V+DEEH+ YKQ+E RY D+ RA + Sbjct: 294 IFRGEAPIVVGARSAVFAPLQNIGLFVLDEEHEPGYKQEEAPRYLTGDVVRARAALSKAV 353 Query: 352 IILGSATPALETLCN-VQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAG----LAP 405 ++ GSATPAL T + ++++LL+LT R G + P ++ V+DL+ +++QAG + Sbjct: 354 VVFGSATPALRTYARALTGQQHQLLKLTSRVDGRSLPQVR-VVDLR-EELQAGNRHVFSR 411 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L R+R+ L QV+LFLNRRG A +LC CG C C T H+ L CH+ Sbjct: 412 YLAGRIREKLDQGQQVLLFLNRRGLATIVLCRACGEALSCAHCAISLTYHR-DGSLHCHY 470 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C +R +P CP CG L G GT+++E+ LFPG + R+D DT + K + ++ L Sbjct: 471 CGYRRNLPAACPVCGGERLSRFGTGTQRVEEETQRLFPGARVVRLDGDTVTGKRSHDRLL 530 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 G A ILIGTQM+AKG P VTLV +++ D L D++SAER QL TQVAGRA Sbjct: 531 DSFREGQADILIGTQMIAKGLDLPGVTLVGVVNADTTLLLPDYQSAERTFQLVTQVAGRA 590 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR GEVV+QT+HP+H +Q + Y+ F + +A RR M PP+T+ V Sbjct: 591 GRGPVPGEVVVQTYHPDHYSIQAATSQNYELFFIREMALRREMGYPPFTTLARVLFRGRR 650 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 QQ R L L+ P D ++ V+GP P + +R ++L+ P R L+ ++ Sbjct: 651 ESQVEQAAQQFREL-LALP-EDGRIQVMGPAPPPVARIKDYYRRHLILKAPKRKELRMLL 708 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 TL KV +D+DP Sbjct: 709 VETLDKFEA-GGRNKVLVGIDIDP 731 >UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus RepID=D2RNT9_ACIFE Length = 797 Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust. Identities = 236/588 (40%), Positives = 329/588 (55%), Gaps = 11/588 (1%) Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR-DQVATLEFNDAALQALRKKGLCDL 176 + AT +G A N R QQ AL L GK ++ A L+ L +KG L Sbjct: 182 FTATPEGLAAQENGEVRGKSQQAALDLLPYGKTASAGELEARGITSAVLRNLVRKGWL-L 240 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA--WLLAGVTGSGKTEVY 234 D E L L EQ A+ A+ +A + A +LL G+TGSGKTEVY Sbjct: 241 EGRRRVLRDSYQGLEARKETLELTEEQQAAIQAVDAARENREARTFLLQGITGSGKTEVY 300 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + L G+Q +V+VPEI LT Q + RF+ F A V V HS L+ SER W + ++ Sbjct: 301 LRLAARALQAGQQVMVLVPEIALTGQIVKRFKAWFGAGVAVAHSRLSASERGDVWSRMRS 360 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G+A ++IG RSA+F PF +LG+I+IDEEH+ +YKQ+E YHAR +A YRAH ++P++L Sbjct: 361 GQARVLIGVRSAVFCPFADLGLILIDEEHEGTYKQEERPSYHARLVAQYRAHYRKVPVVL 420 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRA--GNARPAIQHVLDLKGQKVQAG---LAPALIT 409 GSATP LE+ ++ Y LLRLT RA G+ P + ++D++ + Q L+ AL T Sbjct: 421 GSATPDLESYYLAEKGGYTLLRLTHRARSGSHLPKVS-IVDMREELHQGNRTVLSEALRT 479 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 R+ +Q Q I+ LNRRGF+ +LC DCG CP C H + + CH+C Sbjct: 480 RLEHVVQNGEQAIVLLNRRGFSTFVLCRDCGESLSCPNCAVSLVYHAREQLMECHYCGYT 539 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 PVP +CP CGS + G GTE+ E+ + L PGV R+D+D+TS K A EQ L Sbjct: 540 EPVPTKCPYCGSPRIRFFGTGTEKAEREIRELCPGVKPLRMDQDSTSGKFAHEQILQAFR 599 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 G +L+GTQM+AKGH P+VTLV +L D L DFRS ER L TQ AGRAGR Sbjct: 600 SGLYNVLLGTQMVAKGHDIPNVTLVGVLSADSQLNLPDFRSGERCFALLTQAAGRAGRGD 659 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 K GEV+ Q + E+P+LQ + Y+ FA+ L +R+ + PP+T + + + A Sbjct: 660 KPGEVIFQAYDAENPILQLAARQDYEGFAKMELEQRKELSYPPFTRMLKITVLHKKEEEA 719 Query: 650 PLFLQQLRNLILSSPL-ADEKLWVLGPVPALAPKRGGRWRWQILLQHP 696 Q+L N + + L + L +LGP PA+ + +R +LL+ P Sbjct: 720 LAIAQKLVNALEAWQLESGHPLEILGPFPAIVARVNQIYRINVLLKSP 767 Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust. Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 6/105 (5%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A VA+ +P + R F Y +PE + + G RV VPFG QQ G +V +L Sbjct: 1 MEYAKVAINLPAKNIFRQFTYHVPETLDFLGQGWRVVVPFG-QQLLEGFIVEEDREPDLS 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 ELK + +V+ +EP F + W + YY + + L +P Sbjct: 60 -RELKDIADVVGTEPWFDSEMLATAYWLSQYYLCTLAEALRLFIP 103 >UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ4_9FIRM Length = 721 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 262/715 (36%), Positives = 377/715 (52%), Gaps = 52/715 (7%) Query: 1 MPVAHVALP---VPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIV-----VSVSDA 52 M +AHV + + L RTF Y +G TV G RV VPFG + +G V +S +A Sbjct: 1 MKLAHVFIEHSTMHLDRTFSYGC-DGFTVCRGMRVVVPFGAKI-IVGFVERVEEISAQEA 58 Query: 53 SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 + E+K ++ VLD EP+ ++ L A Y P LP L+ A Sbjct: 59 AAYDF-EIKRIIRVLDEEPLLNEELFELANMMAKRYIVPRIACFQCILPAKLKPRSTAKC 117 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---------IWRDQVATLEFNDA 163 + W E+ D+ SL + KQQ L A+++ K +++ V + Sbjct: 118 RKLETWVRYEK----DIASL--TKKQQVVLEAMKEAKEMLRTTYYQMYKS-VGKKLISLG 170 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAI--HSAADTFSAWL 221 + ++ L E P SG LN +Q AV A+ HSA T L Sbjct: 171 CVTVFEREAQAVLGCEEP-----------SGPVFDLNAQQQHAVDAVLHHSAMVT----L 215 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKTEV+L + + + + KQ L++VPEI LTPQ IAR ++RF A V + HS LN Sbjct: 216 LHGVTGSGKTEVFLHLAKAMRERDKQVLILVPEISLTPQMIARVKQRFGAQVAIYHSALN 275 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLA 341 + E+ + K + IV+GTRSA+F PF +LG+IV+DEEHD+SYKQ G RYH RD+A Sbjct: 276 EQEKYEQYQLVKKHQVDIVVGTRSAVFMPFDHLGLIVMDEEHDTSYKQDRGVRYHCRDIA 335 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA 401 + RA Q ++L SATP+LE+ + Y+L+ + +R P ++ V + K + Sbjct: 336 LQRAKIHQAKLVLASATPSLESYARAHKGIYQLVEMPKRINEQFPQVKLVEMREAVKKKE 395 Query: 402 G--LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 ++ AL+ + LQ QVIL LNRRG+ P L C +CG++ CP C+ + H+ + Sbjct: 396 SYLMSNALLDAIYTRLQRKEQVILLLNRRGYTPILRCMECGYVQMCPNCETAMSYHKEEG 455 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L+CH CDS PVP CPSC S +G+GT++LE+ + FP I R+D DTT +K Sbjct: 456 VLKCHICDSVMPVPTHCPSCHSAAWRYMGMGTQKLEEFIQIKFPQAKIIRMDADTTHKKH 515 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 A E L + + A IL+GTQM+AKG F +VTLV +L+ D L +D+RSAE L Sbjct: 516 AHENYLRDFGKHKADILLGTQMIAKGLDFENVTLVGILNGDALLNRSDYRSAELCYDLLE 575 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 Q GR+GR KQGEV++Q + +H +Q + Y F + + R + PP+T ++I Sbjct: 576 QACGRSGRGEKQGEVIIQAYDTKHYAIQCAAHHDYKTFFKNEMNYRHLAGYPPYT-YLIS 634 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 H + Q L S A ++ VLGP AL R G R +ILL+ Sbjct: 635 LTFSHKQEELAY---QGAQLAFSLLKAKSEVRVLGPT-ALHKLR-GECRIRILLK 684 >UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB01_9CHLA Length = 746 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 261/752 (34%), Positives = 401/752 (53%), Gaps = 44/752 (5%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASEL----PL 57 A V L V + +T DY +PE + K G RV VP + R G ++ + + ++ P+ Sbjct: 10 AAVILDVAIEKTLDYGIPEDLVPEAKKGVRVEVPL-RGSLRNGYIMEIKETADYARVSPI 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 + V++ + ++ L LW + YY P+ V +P +R+ ++ Sbjct: 69 QRIFPDVQI-------SEDLFELALWISRYYLAPLSQVFKILVPSSIRKDMQHKQQ-LFV 120 Query: 118 WFATEQGQAVDLNSLKRSPKQQQA-----LAALRQGKIWRDQVATLEFNDAALQALRKKG 172 + Q ++ R+ QA + +++G + + + + + + L KG Sbjct: 121 MRKQTREQLKEVCETIRNKHSAQAAVLDEMLLVKKGILLSELLEKTGGSRSPVDTLAAKG 180 Query: 173 LCDLA----SETPEFSDWRTNYAVSGERLRLNTEQATAVGAI-HS-AADTFSAWLLAGVT 226 + +P + Y ++ ++ L+ EQ A I HS A F LL G+T Sbjct: 181 YLLVEPVRIDRSPLIGE---EYLLTKPKI-LSAEQQEAFTKIAHSLEAGIFQTHLLYGIT 236 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTEVYL +E L K A+++VPEI LT QTI RF+ RF + +LH L+ ER Sbjct: 237 GSGKTEVYLQAIEKALQMQKSAIMLVPEISLTAQTIERFKSRFPDNIAILHHRLSHGERF 296 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAVYRA 345 W K + GEA IVIG RSA+F+P NLG++++DEEH+ SYKQQE YHARD+AV R Sbjct: 297 DEWHKIRRGEARIVIGARSAVFSPVPNLGLVIVDEEHEQSYKQQEESPCYHARDIAVMRG 356 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---- 401 Q ++LGSATP++E+ N + KY L L +RA ++ ++D+K + +A Sbjct: 357 KIAQATVLLGSATPSIESYYNAIKGKYVLSLLKKRAESSLLPSVTIVDMKREFEKAKGFT 416 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L+ + + L Q ILFLNRRG+ L C C +CP C T + +++ L Sbjct: 417 NFSELLLNEIEKRLTTGEQTILFLNRRGYHTTLTCPSCQTAIKCPHCSLALTFYYSRNSL 476 Query: 462 RCHHCD-SQRPVPRQCPSCGS-THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 CH CD + P P CP+C T + G+GTE +E++L +FP + RID DTT KG Sbjct: 477 SCHLCDFTISPPPSTCPNCKKDTPMKFQGVGTELIERSLHAIFPDIRTIRIDADTTKHKG 536 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 + ++ L + G A +LIGTQM+AKG HF +VTLV +L+ D +L DFRS+E QL T Sbjct: 537 SHQKLLRDFGTGKADVLIGTQMIAKGLHFSEVTLVGVLNGDASLNIPDFRSSEIAFQLMT 596 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QVAGRAGR QG+V++QTH P++ +Q + Y AF E+ ++ R + PP++S V + Sbjct: 597 QVAGRAGRGITQGKVIIQTHIPDNSTIQLASQQNYTAFFEEEISSRELFNFPPFSSMVKL 656 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSR 698 N + F Q R+ L + L + ++VL PV P+ K R+R+Q L++ PS Sbjct: 657 NFSGSNEKETLEFSQIFRSK-LQTNLPE--IFVLSPVIPSGHAKVKDRFRFQFLVRGPSI 713 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 I TL +IP +K ++DV+P+ Sbjct: 714 YAANQAIKTTLQR-TSIPHG--MKLLVDVNPL 742 >UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC9_9BACT Length = 789 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 239/734 (32%), Positives = 380/734 (51%), Gaps = 71/734 (9%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP-----------ILLRQGRP 109 KAV+EVLD+ PV + + +L W ADYYH +G LF LP I L + P Sbjct: 58 KAVIEVLDTVPVLSPELMKLGYWMADYYHCSVGKALFAMLPARLLPEMEANVIWLSENVP 117 Query: 110 AANAPMW----------------------YWFATEQGQAVDLNSLKR------------- 134 P+ + E+G+ + L ++R Sbjct: 118 EPFIPLKKAIDKSENPVLKTLRKELTSYPLYKRIEEGEELGLLKIERRLNHKDKPRTVNF 177 Query: 135 ----SPKQQQALAALRQGKIW---RDQVATLEFND-------AALQALRKKGLCDLASET 180 P ++ L+Q + W +++ + ++ +A++AL KKG + E Sbjct: 178 IIRLQPTLEEDTLPLKQREAWEKIKEEEPSFPMSNISSTISYSAIKALVKKGFIKI--EP 235 Query: 181 PEFSDWRTNYAVSG--ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 F ++ S +++ LN Q A+ I TF+ LL G+TGSGKTEVY+ ++ Sbjct: 236 RRFEPESVSFENSSPLKQITLNYAQVEAIKDITEGFGTFNVNLLYGITGSGKTEVYIELI 295 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 + L+ K + ++PEI LTPQ + RF+ F + + HS L + +RL W K K+GE Sbjct: 296 RHYLSVNKTVIFLIPEIALTPQMVDRFQSNFGQILAIQHSQLTEKDRLIQWQKIKSGEKR 355 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IVIG RSA+F P +LG+I++DEEH+ +YKQ+ RY RDLA+ RA + +ILGSAT Sbjct: 356 IVIGARSAVFAPLPDLGLIIVDEEHEGTYKQESAPRYQGRDLAIVRAQIQNAQVILGSAT 415 Query: 359 PALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 PALE+ N Q KY+L ++ R + P +Q V+DL+ + + ++ L+ + + LQ Sbjct: 416 PALESWHNAQNGKYKLQKIESRPLDYCLPDVQ-VVDLRDEYEHSLISAPLLEAIDKRLQR 474 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QVILF NRRG++ + C CG + C C+ + H+ + ++CH+C + P PR+CP Sbjct: 475 KEQVILFQNRRGYSSFMQCLKCGKLITCKNCEISMSYHRDREEMQCHYCGNTIPSPRKCP 534 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CGS GT+++EQ L LFP I R+D D+ ++ + + IL+ Sbjct: 535 YCGSYSFAYGAPGTQKIEQNLKILFPEAKILRMDSDSARKRDTYKSMYNRMKNKEVDILL 594 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM++KG FP VTLV ++ D +L DFR+AER QL TQVAGR+GR K GEV++Q Sbjct: 595 GTQMISKGLDFPLVTLVGIVMADISLNLPDFRAAERTFQLLTQVAGRSGRRDKAGEVIIQ 654 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T++PEH +++ + Y FA + L R+ + PP+ + + + + + +R Sbjct: 655 TYNPEHYAIESASQQNYIRFATEELGYRKKLYYPPYYRLARILFQSTDLETLKKEMSNMR 714 Query: 658 NL--ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + +L + +L +LGP A K +R+ ++ + + LQ+ I +L N Sbjct: 715 EVLYLLRKQIPMPQLLLLGPSVAPFSKISSYYRYHLIFKAQTVKILQNAIRLFNSLYNCP 774 Query: 716 PDSRKVKWVLDVDP 729 + RK +D+DP Sbjct: 775 SNIRK---QIDIDP 785 >UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTV2_9BACT Length = 748 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 271/758 (35%), Positives = 385/758 (50%), Gaps = 40/758 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M A + LP+ P + + + EG+T+ G V VPFG+ + GIV + D + Sbjct: 1 MRYADIVLPLAQP-LYTFAVAEGVTLCEGMAVVVPFGRSKIYTGIVWRLHDRRP-DFKTV 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR-----QGRPAANA-- 113 K V VL P+ R W ADYY +G+V+ ALP L++ + AA+ Sbjct: 59 KTVSRVLYGTPLLDERQRRFWEWVADYYMCTLGEVMRVALPSLMKPSGHGEEEFAADEFR 118 Query: 114 PMWYWFATEQGQAVDLNSL--------KRSPKQQQALAALRQGKIWRDQVAT--LEFNDA 163 P WF G+A+ + L +R+P+Q++AL L +VA L + Sbjct: 119 PRREWFVALAGEALTADGLAAALERMGRRAPRQREALEELAALAPDGAEVARSRLAADRT 178 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNT---EQATAVGAIHSAADTFSAW 220 AL L KKGL + G + RL T Q A I + + Sbjct: 179 ALALLVKKGLLTCIER-----EVAPGPVTGGAQFRLPTLSAAQRKAAEEIRAVFADRATV 233 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL GVTGSGKTE+Y+ VLA+G Q L++VPEI LT Q + R R+ F V HS L Sbjct: 234 LLRGVTGSGKTEIYMHFAAEVLARGGQVLLLVPEIALTAQLVDRLRQVFGERVIAYHSKL 293 Query: 281 NDSERLSAWLKAKNGEAA-IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHAR 338 D +R +L+ ++ +VIG RSA+F P + L ++V+DEEHD SYKQ + RY AR Sbjct: 294 TDRKRTELYLRLRDSAGGELVIGARSAIFLPLRRLELVVVDEEHDPSYKQTDPAPRYQAR 353 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAI---QHVLDL 394 D AV +LGSATP+LE+ N KY + L R G +R P I + + Sbjct: 354 DCAVLMTRLLGCRTLLGSATPSLESYLNAATGKYGSVVLAERYGPSRMPQILVSDTIRAV 413 Query: 395 KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 K + A L+ RM + L Q +LF NRRGFAP + C +CGW A CP C+ TL Sbjct: 414 KRGERHAHFNKLLLDRMEETLGGGGQAMLFQNRRGFAPYVECRECGWTARCPDCNVTLTL 473 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ + CH+C PVP +CP C T VP+G GTE++E+ +A +FP ++R+DRD+ Sbjct: 474 HKGSGRMVCHYCGHTEPVPAKCPHCRVTEPVPMGFGTEKVEEEIARVFPEARVARLDRDS 533 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 + + A Q + RG IL+GTQM+ KG F V LV +L+ D L + DFRSAER Sbjct: 534 VTSERAFRQIVEAFARGDDDILVGTQMITKGFDFGGVELVGVLNADNLLNNPDFRSAERA 593 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL QVAGRAGR G VV+QT P HP+LQ ++ Y+A A Q LAER+ PP+ Sbjct: 594 FQLLMQVAGRAGRRENPGTVVIQTAEPGHPVLQQVIAGDYEAMARQQLAERKAFFYPPYA 653 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + + P+ L++ N + ++ VLGP + G + +LL+ Sbjct: 654 RLLNLLLRHRD----PVTLRRAANALAAALRERFGRRVLGPTAPPVDRVRGEYLATLLLK 709 Query: 695 ---HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 S R + + G L + P+ + V + DVDP Sbjct: 710 VEAGASLARAREAVRGILDRVVKSPECKGVTILCDVDP 747 >UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR35_ANATD Length = 724 Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust. Identities = 239/739 (32%), Positives = 386/739 (52%), Gaps = 49/739 (6%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLD 68 + + FDYL+P + +++ G RV V FG + G+VV + +++ N++K V+ V+D Sbjct: 14 VDKVFDYLVPTHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDIEENKIKCVLAVID 73 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAV- 127 + + L +YY +G+ L +P P ++ Y ++ + Sbjct: 74 KFSIVSKEQIELAFSMKNYYALNLGEALSLVIP-------PFVSSKQIYNICAKKCEENK 126 Query: 128 ----DLNSLKRSPKQQQALAALRQGKIWRDQVATL------EFNDAALQALRKKGLCDLA 177 DL L S ++ + K ++++ L EF+ R+ +L Sbjct: 127 NLDDDLKELYESILKKPVSINSKLVKENKEKIVKLFLEGLLEFDLKNFDT-RENTEKNLP 185 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYL 235 PEF+ L EQ A+ I SA D + LL GVTGSGKTEVY+ Sbjct: 186 RVEPEFN--------------LTEEQNKALNNIISAFDEGGYRNILLFGVTGSGKTEVYI 231 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 ++ V+ +GK + MVPEI LTPQ I + R V V HS + +RL++WL A+N Sbjct: 232 RAIQYVIEKGKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSIDRLNSWLAARNK 291 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 EA +VIG RSA+F P KNLG+I++DEEH+ SYK ++ R +A ++A RA IPIILG Sbjct: 292 EAVVVIGPRSAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIILG 351 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMR 412 SATP++E ++ KY L L R P + ++D+K + ++ + L++ + Sbjct: 352 SATPSIEHYYYAKKGKYSLCTLKNRINKTLPEVL-IVDMKKEILEGNKSIFSRLLLSEIE 410 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 +L+ QV+LFLNRRG++P ++C +CG++ C C T H+ + +L+CH+C + Sbjct: 411 NNLKKGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-EGYLKCHYCGYKEEY 469 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 C C S ++ G GT+++E+ + F + R+D DTTS+K A EQ + + Sbjct: 470 KGVCTKCNSRYVRQYGSGTQKIEEEIKAYFKDARVLRMDSDTTSKKDATEQIVKKFREKE 529 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 A IL+GTQM+AKG HFPD+TLV ++D D L DFRS ER QL TQVAGR+GR K G Sbjct: 530 ADILVGTQMIAKGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGRE-KPG 588 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 +V++QT +PE + Y++F Q + R+MM PP++ V A Sbjct: 589 KVIIQTFNPEDYSIVFASKHDYESFYAQEMKLRKMMVYPPYSYVVNFVTVAREENMAKRG 648 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 ++ + L+ + + ++ + + GP K ++R+ IL++ ++ I N LI Sbjct: 649 IEHVYALLKENEMEND-MKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIAN----LI 703 Query: 713 NTIPDSRKVKWVLDVDPIE 731 + ++DV+P++ Sbjct: 704 KERYNYSNASLIIDVNPLD 722 >UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii KC4 RepID=C9RCL9_AMMDK Length = 730 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 286/750 (38%), Positives = 412/750 (54%), Gaps = 45/750 (6%) Query: 3 VAHVALPVPLP---RTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPL 57 + VA+ +PLP + Y LP + K G RV VPF + + +G+VV + + + Sbjct: 1 MVQVAVALPLPPGKEVYSYRLPPQLAEKVIPGARVVVPF-RGRPVVGVVVELEEEIPEGV 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ELK ++ V +++P+ + RL W A+ Y +G+ L L P +Y Sbjct: 60 KELKPIIRVEEAKPL-PPKLLRLGEWLAERYLCSLGEAL-------LALTAPPGEKEEYY 111 Query: 118 WFATEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLE---FNDAALQALRKKGL 173 + A ++ + +L +R P Q +ALA + D+++ L L AL +KGL Sbjct: 112 FPAEDRDLEETIEALSRRFPAQARALAVV-VAFPGIDRLSLLREAGVKAQTLDALWRKGL 170 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKT 231 + E F + + L L QA A+ + A + T + LL GVTGSGKT Sbjct: 171 --VRKEKASFKALPFPFTPAETGLSLTPAQAKALSRVEEALNRKTPAVLLLHGVTGSGKT 228 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL LAQG+Q +V+VPEI L Q + +FR RF V VLHS L + ER ++W + Sbjct: 229 EVYLRAASLTLAQGRQVIVLVPEIVLAYQLVEQFRSRFGDRVAVLHSALGERERGTSWQR 288 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GEA +VIG RSA+F P LG+IV+DEEH+ +YKQ++ RYHAR++A+ RA + Sbjct: 289 VERGEAPVVIGARSAVFAPVSRLGLIVLDEEHEPAYKQEQVPRYHAREVALARAAQDGAV 348 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQ--KVQAGL-APAL 407 ++LGSATP+LET Y LL L +R G+ P ++ V DL+ + + GL + L Sbjct: 349 VLLGSATPSLETYARALAGHYELLELPQRVDGSPLPQVRLV-DLREEYRRGMTGLFSRFL 407 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + R+++ L+ QVILFLNRRGFA +LC CG I CP CD T +Q L CH+C Sbjct: 408 LKRIKEKLRLGEQVILFLNRRGFAAFVLCRSCGRILRCPHCDIALTFYQPDLLL-CHYCH 466 Query: 468 SQRPVPRQ---CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 + + RQ CP CG L G GT++LE + LFP ++R+D +TTSR+G+ E Sbjct: 467 YR--IRRQKLFCPYCGKGELELYGAGTQRLEAEVKSLFPEARVARLDAETTSRRGSHEAI 524 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L+ V R ILIGTQM+AKG P VTLV +++ D L DFR+AER QL QVAGR Sbjct: 525 LSAVARREVDILIGTQMVAKGLDLPGVTLVGVVNADVTLTLPDFRAAERTFQLLYQVAGR 584 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVR-- 640 AGR G GEVV+Q+H PEH + + + FA + LA RR + PP++ + V+ Sbjct: 585 AGRGGTPGEVVIQSHCPEHYAIYLSARQDFSTFARRELALRRRFEYPPFSHLARVVFTGA 644 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 AE+ + A F R L+L+ A E++ VLGP P K G WRW I+L+ Sbjct: 645 AENKVRERALRF----RELLLAE--AGEEITVLGPAPCPLGKLKGFWRWHIILKGRKAKP 698 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L+ I+ T+ + +VK LD+DP+ Sbjct: 699 LREILRETVEQAKRKAGA-EVKIALDIDPL 727 >UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS2_SYNAS Length = 809 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 238/583 (40%), Positives = 323/583 (55%), Gaps = 33/583 (5%) Query: 168 LRKKGLCDLAS--------ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--F 217 L +KGL L+ E+PE S + LN +QA A G + SA + F Sbjct: 237 LMEKGLVSLSEREVYRSSEESPEMSILND--------IHLNDDQAAACGELESALSSRRF 288 Query: 218 SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVL 276 +LL GVTGSGKTEVY ++ L G AL +VPEIGLTPQ ++R R RF + V+ Sbjct: 289 KPFLLHGVTGSGKTEVYFHAIKQALNSGGGALYLVPEIGLTPQLLSRVRNRFQGEEIAVI 348 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HS + R W + + GE +V+G RSALF P NL +IVIDEEHDSSYKQ RYH Sbjct: 349 HSDIARGIRYDFWRRLQRGEIRLVVGARSALFAPLPNLRLIVIDEEHDSSYKQDVRMRYH 408 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLK 395 ARDLAV RA + I+LGSATP + T +Q KY L L RR N RP Q ++D+K Sbjct: 409 ARDLAVLRAKLQNAVIVLGSATPDMRTFYQARQGKYDCLSLPRRVEN-RPLPQVRIVDMK 467 Query: 396 GQKVQAGLAP----ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 ++ + G P ALIT + + L +Q + FLNRRGF L C DCG + CP C Sbjct: 468 AEREETGRIPVLSRALITALEETLNDGSQALFFLNRRGFHTFLFCPDCGTVLFCPNCAVS 527 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 TLH + L+CH+CD P CP CG + G GTE+LE+ + FP + +R+D Sbjct: 528 LTLHAEANRLQCHYCDYAVKTPSLCPKCGGRDIQFYGAGTERLEKEILSHFPHIRTARMD 587 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 RDTT+RKGA + L RG +LIGTQM+ KGH F +VTLV ++ D AL DFRSA Sbjct: 588 RDTTARKGAHTRILKSFDRGEIDLLIGTQMITKGHDFHNVTLVGVIAADTALNLPDFRSA 647 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 E+ QL TQV+GR GR K+G+V++QT +P+H +Q Y F E+ + R+ + P Sbjct: 648 EKTFQLLTQVSGRGGRGRKEGQVIIQTINPDHFAIQRAKNHDYTGFHEEEILHRKSLGYP 707 Query: 632 PWTSHVIVRAEDHNNQHAPLFL----QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 P++ +I++ N + + + R + V+GP A K GR+ Sbjct: 708 PFSRLIILQLSSLNEERGRREVEEAGRMARAFTREESSRTMPVEVIGPAEAPIAKIKGRY 767 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 RWQI+L+ + L + L T SRK++ +DVDP+ Sbjct: 768 RWQIMLKSDNLQALHFLTRRLL----TSAASRKLEIKVDVDPV 806 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 5/98 (5%) Query: 6 VALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 +A+ +P F Y +P+ ++ A G R VPFG ++ G ++ SE ++++ + Sbjct: 7 IAINIPTESHFTYSVPQALSGDAAVGKRALVPFGARK-LTGYIIGF--LSEPDFDDIRDI 63 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 +++LDSEP+F+ WA+ YYH+P+G L LP Sbjct: 64 LDILDSEPLFSSEDLAFYSWASSYYHYPLGKTLHDILP 101 >UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepID=Q3ASD1_CHLCH Length = 815 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 240/617 (38%), Positives = 336/617 (54%), Gaps = 30/617 (4%) Query: 129 LNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRT 188 L S+ + KQ L+ L + LE + A +Q L KGL + + E S++ + Sbjct: 209 LESVASAKKQHATLSTLADLYPETAFLNELEVSHAVIQVLLNKGLVEKVQKRIE-SNFSS 267 Query: 189 NYAVSGERLRLNT-EQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 Y S + + T +Q + + SA+ + +LL GVTGSGKT VY+ L+ VLA G Sbjct: 268 GYRESAQPAKKPTAQQQKVLNELCSASRQGHYQTFLLHGVTGSGKTLVYIEFLKEVLAAG 327 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 K A+V+VPEI LTPQT RFRE F+ + +LHS ++ E+ AW K+G I +G RS Sbjct: 328 KTAIVLVPEIALTPQTAGRFREHFHHDIAILHSAMSLQEKYDAWHSLKSGRCRIALGARS 387 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 LF P +NLG I++DEEHD +YKQ RYHARD AV RA +LGSATP+ E+ Sbjct: 388 TLFAPLENLGAIIVDEEHDGAYKQDRSPRYHARDTAVMRAMLSNAICLLGSATPSFESYQ 447 Query: 366 NVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILF 424 N Q KY LLR+ R G P I + + + ++ L ++ Q ++ + QVIL Sbjct: 448 NAQNGKYHLLRMAERIDGATMPTISLIWMRESPRRTTSISEMLYQQIAQRIEKNEQVILL 507 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 NRRGFA ++LC +CG I CP C+ H +HLRCH+C C +C ST L Sbjct: 508 QNRRGFAGSILCLECGHIPLCPHCNIPLVYHATHNHLRCHYCGHTERYKAMCSACKSTGL 567 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 G GTE++E+ L LFP I R+D DTT++KGA + L E H ARIL+GTQM+AK Sbjct: 568 FYKGSGTERIEEELQKLFPDEKILRMDVDTTAKKGAHGRILREFHERKARILLGTQMVAK 627 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G FP VTLV +L D L DFR++ER L QVAGRAGRA GEV++Q ++ E Sbjct: 628 GLDFPAVTLVGVLMGDIGLNIPDFRASERTFALLMQVAGRAGRAAIPGEVLIQVYNKESD 687 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR--AEDH-NNQHAPLFLQQLRNLIL 661 + LL+ Y+ F +Q L RR + PP + A+D + A F ++ I+ Sbjct: 688 VFTALLHGDYERFFQQELESRRTLLYPPAARLIKFECSADDEVQAEAAATFCKE----IV 743 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA--LINTIPD-- 717 L +++ VLGP PA K R+R+ +L++ ++ G L+ I + D Sbjct: 744 QQHLPEKQGMVLGPAPACIAKIRNRFRYHVLVK---------LMLGKLSPLFIREMSDTI 794 Query: 718 -----SRKVKWVLDVDP 729 S V +DVDP Sbjct: 795 HSRFRSANVLLTVDVDP 811 >UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N540_SLAHD Length = 695 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 271/753 (35%), Positives = 386/753 (51%), Gaps = 84/753 (11%) Query: 1 MPVAHVALPV---PLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVS---DAS 53 M A V L + L ++ Y +P+ M V+ GC V V FG++Q +G V+SV+ +A Sbjct: 1 MKTASVILDINTQSLDSSYTYAVPDDMEGVEVGCPVLVEFGRRQA-VGYVMSVAPLDEAD 59 Query: 54 ELP-LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 ELP ++LK ++ VL E F L+ A Y P+ + P Sbjct: 60 ELPDASKLKPLLAVL-GESCFDEHAAALIEHMAYTYIAPLSSCIHLFTPA---------- 108 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 R+PK ++ G WR Q A + RK Sbjct: 109 --------------------GRTPK------VVKDGDGWRLQ-------KPAKRRARKDA 135 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD----TFSAWLLAGVTGS 228 + D E RT S + L L Q A AI A D ++ GVTGS Sbjct: 136 VDDGEPEV------RT----SNDDLSLTEGQKAAFDAISEAIDGKPDAGRCIVVDGVTGS 185 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVYL + VL G+ A+V+VPEI LTPQT+ARF+ RF V V+HS + ++R Sbjct: 186 GKTEVYLRSIGKVLEVGQGAIVLVPEIALTPQTVARFKGRFGNTVAVMHSNMTQAQRYDE 245 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W K GE +V+G RSALF P LG+I+IDEEH+S+YKQ+ RYHARD+AV+ Sbjct: 246 WTAVKRGERRVVVGARSALFAPVGRLGIIIIDEEHESTYKQESAPRYHARDIAVWLGDRL 305 Query: 349 QIPIILGSATPALETLCNVQQK-KYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPA 406 IP++LGSATP++E+L K +R + L RA G P ++ V+D+ ++ +G Sbjct: 306 GIPVVLGSATPSIESLHACATKPGWRKVDLPERANGKPMPDVE-VVDM-AKEFHSGSRSM 363 Query: 407 LITRMRQHL----QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 R+ Q L A ++ +L LN+RGFA +LC DCG++ ECP C T H+ +H L Sbjct: 364 FSKRLTQALFETVDAGHKAVLLLNQRGFANFMLCRDCGFVPECPTCSVSLTYHEVEHALI 423 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG--VPISRIDRDTTSRKGA 520 CHHC ++PVP +CP CGS +L G GT+++E L L G VP+ R+D DTTS + A Sbjct: 424 CHHCGRRQPVPARCPECGSPYLRKFGAGTQRVESELKALLEGRDVPVIRMDSDTTSTRNA 483 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 E+ L R GA +L+GTQM+AKG F +VTLV +++ D L DFRSAER L Q Sbjct: 484 HEELLKRFARPGASVLLGTQMIAKGLDFDEVTLVGVINADTQLKLPDFRSAERTFDLIQQ 543 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 VAGRAGR G+V +QT+ E +Q + F L +R+M++ PP+ V Sbjct: 544 VAGRAGRGVFAGKVYVQTYVSESVAVQAAAHYDRKRFLIDELPKRKMLRYPPYARIADVL 603 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLADE--KLWV-LGPVPALAPKRGGRWRWQILLQHPS 697 H+ Q Q L + + L D + WV G P L K +RW IL++ P+ Sbjct: 604 VWGHDAQEVQKAAQALAQRV-EAALHDNGGEGWVSFGAAPCLLSKIRNMYRWHILVKAPA 662 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + +++ ++ + S+ V DVDP+ Sbjct: 663 GADVSAVLS---PVMRSRKASKTVNVACDVDPL 692 >UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepID=A9KMA0_CLOPH Length = 792 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 227/642 (35%), Positives = 353/642 (54%), Gaps = 23/642 (3%) Query: 12 LPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLD 68 L +T+ Y +P + A G V +PFG I G +V +SD ++ +K+++ + D Sbjct: 15 LDKTYQYSIPPALCADAVIGVPVTIPFGNGNRSISGFIVGLSDVPKIAPERIKSILGIKD 74 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE--QGQA 126 + L + + Y + D L +P+ + + + + E Q Sbjct: 75 KGLPIEGQMIALAAFVKEQYGGTMNDALKTVIPVK-KSVKQIEKRIVSSAVSKEKLQDAY 133 Query: 127 VDLNSLKRSPKQQQALAALRQGKI-WRDQVATLEFNDAALQALRKKGLCDLASET----P 181 ++ K K + LA + +I + D V L + + +L++ G+ + SET P Sbjct: 134 IEAEKKKHKAKARLLLALMNSEEIEFEDIVNKLNISRTTINSLKESGIIQIESETKYRNP 193 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLE 239 S +Y++S LN EQ V + + +L+ G+TGSGKTEVY+ +++ Sbjct: 194 IASKTTDSYSIS-----LNYEQQEIVSKVLKDYEEGIRKTYLIHGITGSGKTEVYMGIID 248 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 V+ G+Q ++++PEI LT QT+ RF +RF + +L+S ++ ER +AKNG+ I Sbjct: 249 QVIQSGRQVIMLIPEIALTYQTVVRFYKRFGNRISILNSKMSAGERYDQIERAKNGDIDI 308 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 +IG RSALFTPFK+LG+I+IDEEH++SYK + +YHAR++A+ R IILGSATP Sbjct: 309 MIGPRSALFTPFKDLGLIIIDEEHETSYKSEMPPKYHAREVAIKRGELSNASIILGSATP 368 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQ 416 +LE ++ L LT+RA A+ + ++DLK + + + L + + L+ Sbjct: 369 SLEAYKKAMDGEFELFHLTKRAKEAKVPMVSIVDLKEELKKKNKSIFSDLLRSLIEDRLR 428 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q++LFLNRRG+A + C CG +CP CD T H + L+CH+C + P P C Sbjct: 429 KKEQIMLFLNRRGYAGFVSCRSCGTAMKCPHCDISLTAH-STGVLKCHYCGYEIPTPNIC 487 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P CGS ++ G GT+++E + FP + R+D DTT K + E+ L+ G A IL Sbjct: 488 PVCGSKYIAAFGTGTQKVEAMVLKEFPTARVLRMDADTTKNKLSYEEILSSFANGEADIL 547 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 IGTQM+ KGH F VTLV +L D +L++ D+R+AER QL Q AGRAGR GEVV+ Sbjct: 548 IGTQMIVKGHDFAGVTLVGILAADLSLYANDYRAAERTFQLLAQAAGRAGRGELIGEVVI 607 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QT+ PEH + T + Y AF EQ + RR+M+ PP +H++ Sbjct: 608 QTYQPEHYAVTTAATEDYVAFYEQEMNYRRLMKYPP-AAHIM 648 >UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae RepID=Q123Y5_POLSJ Length = 739 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 245/608 (40%), Positives = 315/608 (51%), Gaps = 72/608 (11%) Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG--KQALV 250 + + + L +Q A+ AD A LL G TGSGKTEVYL VL Q Q LV Sbjct: 132 TADLIALTPQQTKALAEFDGDADARPA-LLFGATGSGKTEVYLRAAARVLEQDPDAQVLV 190 Query: 251 MVPEIGLTPQTIARFRERF----NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 MVPEI LTPQ ARF RF V +HSGL ++RL WL A G+A +V+GTR A Sbjct: 191 MVPEINLTPQLQARFEARFAHLGKERVVPMHSGLTPAQRLKGWLAAHTGQARLVLGTRMA 250 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP---------IILGSA 357 + NL ++V+DEEHD SYKQQEG RY ARDLAVYRA E ++LGSA Sbjct: 251 VLASLPNLRLLVVDEEHDPSYKQQEGARYSARDLAVYRAKLETAEARHAHGPCRVLLGSA 310 Query: 358 TPALETLCNVQQKKYRLLRLTRRAG----------------------------------- 382 TP+LE+ +Y+ L +T R G Sbjct: 311 TPSLESWQATLTGRYQRLTMTERIGVPSSIGMEALQFSDGPPLGKLAPPGGSELRAASER 370 Query: 383 NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWI 442 P ++ V D+ Q +AP L+ + Q + Q ++FLNRRG+AP L CHDCGW Sbjct: 371 GGLPLVRRV-DMNHQPKHCIIAPPLVEAIAQRVARGEQSLIFLNRRGYAPVLACHDCGWK 429 Query: 443 AECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 +ECP C Y H+ LRCHHC VPR CP CG+ + PVG GTE+LE+ LA L Sbjct: 430 SECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPDCGNIDIAPVGRGTERLEEHLAELL 489 Query: 503 P--------GVP----ISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 GVP I+RID D+T KGALE QLA VH +L+GTQM+AKGH F Sbjct: 490 AHVQRPDDGGVPGPVRIARIDADSTRLKGALESQLASVHAREVDVLVGTQMIAKGHDFRH 549 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV---LQTHHPEHPLLQ 607 +TLVA ++ DGALFS+DFR+ ER L Q GRAGR + E +QT HP+HPL + Sbjct: 550 ITLVAAINPDGALFSSDFRAPERLFSLLMQAGGRAGRDARHSEASEMWVQTFHPDHPLFE 609 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD 667 L Y AFA + LAER + P+ +VRAE + A FL + + Sbjct: 610 ALKKHDYPAFAARQLAEREAAGMAPFGFSALVRAEARAQEVAQGFLNAAAASAKAQQVTG 669 Query: 668 -EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING-TLALINTIPDS---RKVK 722 +++ VP + R Q+L++ PSR LQ + L T S ++ Sbjct: 670 HDQVAAYPAVPMTIQRVANIERAQMLVESPSRAALQRFLAAWQPVLFETRQHSDFKSLIR 729 Query: 723 WVLDVDPI 730 W +DVDPI Sbjct: 730 WAVDVDPI 737 Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 10/105 (9%) Query: 4 AHVALPVPLPRTFDY-LLPEGMTVKAGCRVRVPFGKQQERIGIVVSV-SDASELPLNELK 61 AH A+ PL ++ L P G VRVP GK+ E +G+V ++ D+ LP +++ Sbjct: 13 AHSAVAGPLTYRSEFPLFP-------GALVRVPLGKR-EVLGVVWNLLPDSGGLPEKQIR 64 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ 106 ++ LD + +L+ + A YY +G+V ALP LR+ Sbjct: 65 SIAGALDGLAPLATTWRKLVAFTAGYYQRSLGEVALAALPPQLRE 109 >UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT87_9FIRM Length = 801 Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/481 (40%), Positives = 292/481 (60%), Gaps = 8/481 (1%) Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +LL GVTGSGKTEVYL ++ G+ A+++VPEI LTPQ + + + RF V VLHS Sbjct: 288 TFLLEGVTGSGKTEVYLQLMAKASQMGRGAILLVPEIALTPQMVRQVKSRFQTGVAVLHS 347 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 GL +S++ W + G+A IV+G RS++F P ++LG+++IDEEH+++YKQ + RYHAR Sbjct: 348 GLTNSQKYDEWRRIIRGQATIVVGARSSIFAPIRDLGLVIIDEEHETTYKQSDTPRYHAR 407 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARP----AIQHVLDL 394 ++A++R H Q P++LGSATP+LE+ Q +Y+ LRL R N RP + + Sbjct: 408 EVAIWRCHYHQAPLLLGSATPSLESRSRAQVGRYQHLRLPERV-NGRPLPPVTLVDMTKE 466 Query: 395 KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 Q+ L+ L ++ L Q++L LNRRG+A +LC +CG + +CPRCD T Sbjct: 467 MAQQTTDELSSVLKDKITDRLAKGQQIVLLLNRRGYASYMLCRECGQVIQCPRCDISLTY 526 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ +H L+CH+CD Q PVP +CP+C S +L GLGT+++E+ L FP + R+D DT Sbjct: 527 HKHEHRLKCHYCDYQSPVPDRCPNCHSDYLRTFGLGTQKIEELLNQHFPDARVIRMDMDT 586 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T +KG E L R A IL+GTQM+AKG F VTLV +++ D AL DFR+ E+ Sbjct: 587 TRKKGQHEALLDRFRRHEADILLGTQMIAKGLDFEAVTLVGVINADTALNLPDFRAGEKT 646 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL TQVAGR GR +GEV++QT++P+H ++Q Y++F + R + PP+ Sbjct: 647 FQLLTQVAGRTGRGRFEGEVLIQTYNPDHYVMQLAQQHDYESFFYYEMKRRHLGHYPPYF 706 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 ++ A Q++ +L+S A L +LGP + R+ +Q+LL+ Sbjct: 707 YTTLITISSKYQAKAQAMSHQVKQALLASGAA---LEILGPSQGAIARINERYYFQLLLK 763 Query: 695 H 695 + Sbjct: 764 Y 764 >UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=Burkholderiales RepID=A2SC06_METPP Length = 715 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 237/549 (43%), Positives = 323/549 (58%), Gaps = 21/549 (3%) Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 + EQA + A+ ++A LL G TGSGKTE+YL + V+ G+QALV+VPEI LTP Sbjct: 168 SAEQAQVLQALAASAGDAPVTLLHGSTGSGKTEIYLREAQRVVEAGRQALVLVPEINLTP 227 Query: 260 QTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 Q RF RF V LHSGL + RL WL GEA +V+GTR A+F P LG+++ Sbjct: 228 QLEERFLARFPGRRVVSLHSGLTPARRLKHWLMVLLGEADLVLGTRLAVFAPLPRLGLVI 287 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN----VQQKKYRL 374 +DEEHD SYKQQEG RY ARDLAV R E +P++LGSATP+LE+ N + R Sbjct: 288 VDEEHDPSYKQQEGARYSARDLAVVRGRVEGVPVLLGSATPSLESWHNALPATEGGAGRY 347 Query: 375 LRLT---RRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNR 427 RLT R G P ++ ++D+ K + L+PAL+ +R+ L Q ++ LNR Sbjct: 348 TRLTMAARIGGGVLPTVR-LVDMSRLPKEVLRDSALSPALLGALRERLARGEQSLVLLNR 406 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPV 487 RG+AP L C +CGW + C C + H+ LRCHHC VPR CP CG+ + P Sbjct: 407 RGYAPVLHCTECGWKSACAHCSAWRVFHKLDRTLRCHHCGLTERVPRACPDCGNADIQPT 466 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 G GTE+LE+ LA PG + RID DTT R GALE +L+ VH G +L+GTQM+AKGH Sbjct: 467 GRGTERLEEQLALALPGARVGRIDADTTRRSGALEAELSRVHAGEVDVLVGTQMIAKGHD 526 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ---GEVVLQTHHPEHP 604 F +TLVA ++ D ALFS+DFR+ ER L Q AGRAGRA +Q E+ +QT HP+H Sbjct: 527 FRRMTLVAAVNPDAALFSSDFRAPERQFSLLMQAAGRAGRAAEQADRAEMWVQTWHPQHA 586 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 L L Y AFA+ LAERR LPP+T ++RA+ A +L+ + + + Sbjct: 587 LYAALRTHDYAAFAQAQLAERRAAGLPPYTHLALLRADAREQSVAQAWLRVVSD--EARE 644 Query: 665 LADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK--V 721 LA++ ++ + PVP + R Q+L++ SR LQ + A + +K + Sbjct: 645 LAEQHQVALYPPVPLSVQRVADMERAQLLVESASRPALQRFLTAWDATLRRKRPEQKGLL 704 Query: 722 KWVLDVDPI 730 +W +DVDP+ Sbjct: 705 RWAVDVDPL 713 >UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4F8_PAESJ Length = 833 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 217/533 (40%), Positives = 317/533 (59%), Gaps = 29/533 (5%) Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL GVTGSGKTEVY+ +++ L GKQA+V+VPEI LTPQ + RF+ RF V VLHS L Sbjct: 302 LLHGVTGSGKTEVYMQSIQHCLELGKQAIVLVPEISLTPQMVERFKGRFGEAVAVLHSRL 361 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDL 340 ++ ER W K ++ + IG RSA+F PF+ +G+I+IDEEH+SSYKQ+E +YHARD+ Sbjct: 362 SNGERYDEWRKIRSRRVQVAIGARSAIFAPFERIGLIIIDEEHESSYKQEESPKYHARDV 421 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQ-----KKYRLLRLTRRAGN-ARPAIQHVLDL 394 AV RA ++LGSATP+LE+ + K+ LL + R G+ P +Q V+D+ Sbjct: 422 AVRRARQHGAAVVLGSATPSLESFAAASRQPAPGKESALLPMPERVGSRPMPPVQ-VIDM 480 Query: 395 KGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 +G+ +Q G + L + L+ Q +L LNRRG++ ++C CG+ A CP CD Sbjct: 481 RGE-LQDGNRSMFSRKLHAALADRLERGEQSVLLLNRRGYSTFVMCRSCGYTAACPHCDI 539 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 T HQ LRCH+C P++CPSC S H+ G GT+++E+ LA LFPG+ + R+ Sbjct: 540 SLTYHQKSRALRCHYCGHAELAPKECPSCSSEHIRYFGTGTQRVEEELAKLFPGIRVIRM 599 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DTTS K + E+ L + A +L+GTQM+AKG FP VTLV ++ D +L DFRS Sbjct: 600 DVDTTSEKHSHEKLLKQFGERKADVLLGTQMVAKGLDFPYVTLVGVIAADTSLNLPDFRS 659 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 AER QL TQVAGRAGR GEV++QT+ PEH + T + Y AF + L R +M Sbjct: 660 AERTFQLLTQVAGRAGRHHLPGEVIIQTYSPEHYAILTAQHHDYAAFVREELKHRSVMGY 719 Query: 631 PPWTSHVIVRAEDHNNQHAPL-------FLQQLRNLI----LSSPLAD---EKLWVLGPV 676 PP+ V+V +++ PL F ++LR L + PL + +LGPV Sbjct: 720 PPYCRLVLV---TMSHEQLPLLSSVSEQFAERLRGLASDEGVLGPLEGGLPRAMDILGPV 776 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + + R+R+Q ++++ + + ++ +A ++ V++ +DVDP Sbjct: 777 ASPISRMKDRYRFQCVIKYRGNIDIPALLRHAMAPFVEGSQAKLVQFSIDVDP 829 Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 6/91 (6%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + VP R FDY +P GM ++ G RV VPFG + + G V+ +++ +++ Sbjct: 2 IAKVIVDVPSRQTDRPFDYKVPPGMENWIEVGSRVGVPFGPRVLQ-GFVIELAETADVDP 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 +LKAV E+LD P + L W +D Y Sbjct: 61 MKLKAVSELLDPVPPLLPDLIELAKWMSDKY 91 >UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID=C7RHM6_ANAPD Length = 790 Score = 389 bits (998), Expect = e-106, Method: Compositional matrix adjust. Identities = 225/746 (30%), Positives = 377/746 (50%), Gaps = 71/746 (9%) Query: 12 LPRTFDYLLPEGMT--VKAGCRVRVPFGK-QQERIGIVVSVSDASELPLN-ELKAVVEVL 67 L R+F Y +P+ + + RV VPFG + + + + D + +N ++K +++++ Sbjct: 14 LDRSFTYKVPDRLVDDISIARRVLVPFGGGNKTYVAFIYELVDDLDSDINFKIKEIIDLI 73 Query: 68 DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP----------------------ILLR 105 D + ++ + L + + Y PI L +P L+ Sbjct: 74 DDRKLISNELMDLAFFMSKRYISPIQAGLKQVMPPTKIKDIHVYYQNVSELSNDFLDYLK 133 Query: 106 QGRPAAN---------APMWYW---------FATEQGQAV------DLNSLK------RS 135 + R + + Y+ F + Q + DL + R+ Sbjct: 134 EKREIKDIARKFSDYRGKLDYYLQEKIVKETFDVKSSQKISYDEYADLTKMNEEKINSRA 193 Query: 136 PKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDLASETPE--FSDWRTNYA 191 KQ + + L++ I ++ +A + ++L AL K + + + E SD Y Sbjct: 194 HKQIEIVNYLKENGITEVKELLANTKAGKSSLNALISKSIISITKKEKEKEISDLYRKY- 252 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 + LN EQ A I++ D +LL GVTGSGKTE++L ++E V+++GK+A+++ Sbjct: 253 ---NKFTLNDEQQKAYDTINN--DRKGHFLLYGVTGSGKTEIFLQMVEKVISEGKEAIIL 307 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEI LTPQTI RF+ RFN + ++HS L ER + W NGE IVIG RSA+F PF Sbjct: 308 VPEISLTPQTIERFKGRFNEKIAIMHSRLTPKERFNQWRMINNGEVKIVIGARSAIFAPF 367 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 +NLG+I+IDEEHD SY + +YH ++A+ RA + +IL +ATP++ ++ V++ Sbjct: 368 RNLGIIIIDEEHDQSYVSSQDPKYHTDEIAIERARAHSCNLILATATPSIRSMARVEEGD 427 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRR 428 + L++L R N P+I ++D++ + ++ ++ L + +L+ Q ILFLN+ Sbjct: 428 FELIKLNNRVNNHMPSID-IVDMREELKESNFSMISKKLYREIENNLKNSEQTILFLNKV 486 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G C CG + +C CD T H+ L CH+C + R CP C S + G Sbjct: 487 GHDSFTFCRSCGHVIKCEACDVAMTYHKNVDKLVCHYCGRTKNQVRICPVCHSKKIKEFG 546 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GTE+LE+ + FP I R+D T + K E ++ IL+GTQM+AKG F Sbjct: 547 AGTEKLEEEVRNFFPNANILRMDSMTATNKNLYEMMYRDMKNNKIDILLGTQMIAKGLDF 606 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 +V+LV ++ D +L DF++ E QL TQV+GRAGR +G V++QT+ P++ ++Q Sbjct: 607 KNVSLVGIISADLSLNVGDFKANETTFQLLTQVSGRAGRDKIKGRVIIQTYRPDNFVIQA 666 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 Y+AF E L RR PP+ + + +R + + A ++L I S L + Sbjct: 667 AKNNDYEAFYENELKLRRAFNYPPYKNILTIRVVNESRLRAVDISKKLYKDI-SKLLNNT 725 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQ 694 + ++GP P + ++R+ IL++ Sbjct: 726 SIELIGPNPCKIARINNKFRYNILIK 751 >UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales RepID=B1MXU0_LEUCK Length = 806 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 235/618 (38%), Positives = 343/618 (55%), Gaps = 23/618 (3%) Query: 128 DLNSLKRSPKQQQALAAL---RQGKIW--RDQVATLEFNDAALQ-ALRKKGLCDLASETP 181 + +LK + K+Q+ L G+ W RD A L +DA L A+ + L E Sbjct: 194 EYQALKTNAKKQRQLLTFILGHMGEKWSKRDLQAQLAVHDAVLNHAVTHQWLTKTRIE-- 251 Query: 182 EFSDWRTNYAVSGER-LRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVL 238 + D AV L LN+EQ +A AI AAD + +LL G+TGSGKTEVYL Sbjct: 252 QLRDPLATVAVGPTSPLALNSEQQSAFEAIIHAADEGQYQPFLLEGITGSGKTEVYLQAA 311 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 ++V QGK L +VPEI LTPQ + R + RF A VLHSGL+D ER W + + + Sbjct: 312 QHVYNQGKTILFLVPEIALTPQMVQRVKSRFGAQTAVLHSGLSDGERYDEWRRIERDDVK 371 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+G RSA+F P ++LG+I++DEEH+++YKQ + RY+ARD+A++R +IP++LGSAT Sbjct: 372 IVVGARSAVFAPLRHLGLIIVDEEHETTYKQSDNPRYNARDVALWRGEYHRIPVVLGSAT 431 Query: 359 PALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 P+LET Q+ Y L +LT RA AR ++D+K + + AG ++RQ L Sbjct: 432 PSLETRARAQRGVYALCQLTNRAAVGARLPQVEIIDMK-ETLAAGPETNFSDQLRQALND 490 Query: 418 ----DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 Q IL LNRRG++ ++C DCG++ P C+ TLH L+CH+C + +P Sbjct: 491 CLARGEQAILMLNRRGYSSFVMCRDCGYVPRDPNCNLAMTLHMDTKTLKCHYCGHEEAIP 550 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 QC CGS + G GTE++E LA L P + R+D+DTT +KG++ + L + A Sbjct: 551 TQCAHCGSKRIRYYGTGTEKVEAELATLLPQARVIRMDQDTTRKKGSMTKMLTRFGQHEA 610 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQM+AKG F +VTLV +L+ D AL DF ++ER QL TQV+GRAGRA K G+ Sbjct: 611 DILLGTQMIAKGLDFANVTLVGVLNADTALGLPDFHASERTFQLLTQVSGRAGRAKKAGK 670 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN-NQHAPLF 652 V +QT +P H + Y+ F +Q +A R P+ + ++A + N A Sbjct: 671 VFVQTFNPTHYAIAYAKNHDYEGFYQQEMAVRHAGNYAPYFYTIQIQASHTDENTIAKQM 730 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 Q +R L A + +LGP P K R+ +QI+L+ R + ++ Sbjct: 731 FQIVRWL---KSRASNDVIILGPSPKPIAKLRNRYYFQIILKFKQRDEMDVLLTTLYNRA 787 Query: 713 NTIPDSRKVKWVLDVDPI 730 D ++ +D DP+ Sbjct: 788 QKAKDD--LQLSIDRDPV 803 Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Query: 4 AHVALPVPLPRT---FDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A + + VP +T + Y +P+ M ++AG RV VPFG + +G V+++ +++P+ Sbjct: 7 AQIIVDVPTMQTNQPYTYQVPDNMVGIIQAGMRVDVPFGGRHV-MGFVIALVSDTDVPVQ 65 Query: 59 ELKAVVEVLDSEPVFTHSVWRL 80 +LK + +LD P + RL Sbjct: 66 QLKTITHILDLTPALNEELLRL 87 >UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Acidobacteria RepID=Q1IK26_ACIBL Length = 813 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 233/616 (37%), Positives = 342/616 (55%), Gaps = 28/616 (4%) Query: 133 KRSPKQQQALAALRQ--GKIWRDQVATLEFND-----AALQALRKKGLCDLASETPEFSD 185 K + Q+ L AL+ G++ D + LE N + L L K+ + ++ E F Sbjct: 205 KINANQEAILLALKAAGGRLRVDAMRDLEANGKPVPRSTLSTLVKRDIVEIVEEPAGFRI 264 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLA 243 ++ Q A+ I++ D+ F++ LL GVTGSGKT VYLS ++ VL Sbjct: 265 --SSLKPRKLEFLFTPAQQDALRFINTGVDSGKFTSALLHGVTGSGKTAVYLSAMQEVLG 322 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 G+ A+++VPEIGLTP A E F V +LHSGL+D ER W + + GE IV+GT Sbjct: 323 AGRSAILLVPEIGLTPAVAADLHEVFGEQVAILHSGLSDDERAEQWHQIRRGEKRIVVGT 382 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+F P +L ++++DEEHD SYKQ+E RYHARD+AV RA ++LGSATP++ET Sbjct: 383 RSAVFAPVSDLALLIVDEEHDHSYKQEEVPRYHARDVAVVRAKMAGATVVLGSATPSMET 442 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAG----LAPALITRMRQHLQAD 418 N ++ KY LL L R ARP + V+D++ + + G L+ L+ + + L+ Sbjct: 443 YFNAEKGKYALLSLPGRV-QARPLPEVEVIDMRLEFQETGHESVLSRKLVEEVNERLERG 501 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ++ LNRRGFA +LC CG +C C T H+ L CH+C PVPR CP Sbjct: 502 EQAMILLNRRGFANFVLCRACGKTIQCRNCAIALTFHKRDRKLMCHYCGYLAPVPRTCPE 561 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C S H+ G+G+E+LE+ L FP I R+DRDT + LE L +H G +L+G Sbjct: 562 CHSEHIQFFGMGSEKLEELLHGAFPKARIGRLDRDTVRGRDDLENILTALHHGEIDLLVG 621 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKGH VTLV ++ D AL DFR+AER QL TQVAGRAGR G+V++Q+ Sbjct: 622 TQMIAKGHDIHGVTLVGVVGADAALGMPDFRAAERTFQLLTQVAGRAGRGNTPGKVLMQS 681 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPLFLQQL 656 +HP+H ++ + F E+ R M PP+TS +V+VR++ NN A + + Sbjct: 682 YHPDHYVVDYAAKHDFQGFYEKESRLRSWMHYPPYTSLANVLVRSDRVNN--ALTWSGLI 739 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT-- 714 + P E + V+GP A + +R+ +L+ SR +L ++ +A + Sbjct: 740 GKWFETVP--HEGVRVMGPAAAPIERLKNDYRYHFILKSRSREQLNSVLRALIAFSSAKK 797 Query: 715 IPDSRKVKWVLDVDPI 730 IP + ++DVD + Sbjct: 798 IP---RTAVIVDVDAL 810 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 45/97 (46%), Positives = 57/97 (58%), Gaps = 4/97 (4%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 VALPVPL ++F Y EG G RV VPF +QQ+ GIVV+V D+ P E K ++ Sbjct: 7 VALPVPLDQSFTYRF-EGAEPAVGVRVVVPF-RQQKLSGIVVAVHDSP--PSVEAKLILR 62 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI 102 VLD+EPV + L W A YY PIG+V LP+ Sbjct: 63 VLDTEPVLNEQLLELGRWIAGYYIAPIGEVYRTMLPL 99 >UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJK3_9SPHI Length = 804 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 216/562 (38%), Positives = 320/562 (56%), Gaps = 22/562 (3%) Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 P FSD + + E ++L Q TA I + D + LL G+TGSGKTEVY+ +++ Sbjct: 249 PRFSDNGSPDGLQTE-IKLTDAQRTASNQIMAQFDQHNVVLLHGITGSGKTEVYIDLIQQ 307 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L G Q L ++PEI LT Q + R + F + + HS +D+ER+ W +G+ V Sbjct: 308 ALGSGSQVLYLLPEIALTTQIVVRLQRVFGDKMGIYHSKFSDNERVEVWKGVVSGQYQFV 367 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATP 359 +G RSA+F PF NLG+I++DEEH++SYKQ + RYHARD+A+ AH +Q ++LGSATP Sbjct: 368 VGVRSAVFLPFDNLGLIIVDEEHETSYKQHDPAPRYHARDVAIMLAHWQQAKVLLGSATP 427 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL----APALITRMRQHL 415 +LET +Q +Y L+ L +R G+A +++++ +K Q L + L+ + ++ Sbjct: 428 SLETYYQAKQGRYGLVELFQRFGDATLPNIMLVNMQQEKKQKTLRNEFSSVLLGALEANM 487 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q ILF NRRG++P + C DC W AECP C T HQ LRCH+C + VPR Sbjct: 488 ERKEQSILFQNRRGYSPYMQCEDCDWTAECPNCAVSLTYHQRDAELRCHYCGHKEGVPRM 547 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP+CGST + +G GTE+LE L FP + R+D DTT K A +Q + E G I Sbjct: 548 CPTCGSTKVKTIGFGTEKLEDQLQIFFPQSRVLRMDLDTTRAKNAYQQIIQEFEGGQVDI 607 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG-RAGKQGEV 594 L+GTQM+ KG F +V+LV + D D + DFR+ ER Q+ TQV+GRAG RAG+QG V Sbjct: 608 LVGTQMITKGLDFDNVSLVGIFDADRLIHFPDFRATERAFQMITQVSGRAGRRAGRQGTV 667 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDH--NNQHAP 650 ++QT +P+ P+LQ ++ Y + L ER+ PP++ + VR D ++Q A Sbjct: 668 LIQTSNPQQPILQKVIDNDYKGLFTEELQERQDFNYPPFSRLIKLTVRHTDRAISHQAAE 727 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ-HPSRVRLQHIINGTL 709 +L + + SS VLGP L + ++ + IL++ +V ++ + Sbjct: 728 RLAAELVDALGSS-------RVLGPEEPLVERIRNQFLFDILIKIERDKVNIKAVKTYIQ 780 Query: 710 ALINTIPDS---RKVKWVLDVD 728 IN I R+V V DVD Sbjct: 781 DRINDILTDKGLRQVSIVADVD 802 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Query: 26 VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN-ELKAVVEVLDSEPVFTHSVWRLLLWA 84 +K G RV VPFGK+ R+ + + P + + + E LD P+ T L W Sbjct: 5 LKIGARVIVPFGKKNGRVFTAIVAKLHNTPPTGYQARYINETLDEYPLTTSYQLELFRWI 64 Query: 85 ADYYHHPIGDVLFHALP 101 ADYY IG+V+ ALP Sbjct: 65 ADYYMCCIGEVMNVALP 81 >UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB87_DESAA Length = 824 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 213/546 (39%), Positives = 302/546 (55%), Gaps = 14/546 (2%) Query: 196 RLRLNTEQATAVGAIHSA-ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPE 254 R L +EQ A I A + + LL GVTGSGKTEVYL +E L QG +V+VPE Sbjct: 279 RFTLTSEQEVAYTEIVGALGRGYKSILLHGVTGSGKTEVYLRCVEKALEQGLSVIVLVPE 338 Query: 255 IGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNL 314 I L Q RF RF V VLHSGL D ERL W++ G+A I +G RS++F P KN Sbjct: 339 IALISQMQRRFLARFGEKVAVLHSGLTDGERLDQWMRIVRGQAPIALGARSSIFAPVKNP 398 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 G++++DEEHD SYKQ RY ARDLAV R H E+ +LGSATP++ + N K++ Sbjct: 399 GLVIVDEEHDESYKQDSRLRYQARDLAVMRCHMEKAVTVLGSATPSISSRHNCANGKFQK 458 Query: 375 LRLTRRAGNARPAIQHVL-DLKGQKVQAGLAPALITRMRQH-----LQADNQVILFLNRR 428 + + R RP + L DL+ G +L+T + +H L + Q +LFLNRR Sbjct: 459 ISIKNRVAE-RPFPEVTLVDLR--NTTTGQNRSLLTDVLKHHLTETLAKNEQALLFLNRR 515 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 GFA +C +CG C CD T HQ +CH+C + + + CPSCGS L +G Sbjct: 516 GFANFPVCLECGGTITCAHCDVSLTYHQEDGCFQCHYCGFCQDITKGCPSCGSRKLKMMG 575 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 +GTE++E +L +FP I R+DRDT ++KG L L + I++GTQM+ KGH F Sbjct: 576 MGTEKVEDSLRSMFPQAIIGRLDRDTAAKKGGLVSVLKGLREKTTDIVVGTQMITKGHDF 635 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P++TLV ++ D ++ DFR+ ER QL QVAGRAGR K G VVLQT++PEH + T Sbjct: 636 PNITLVGVVCADLSMGFPDFRAGERTFQLLAQVAGRAGRGEKPGRVVLQTYNPEHFCITT 695 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL----QQLRNLILSSP 664 YDAF + L R ++ PP+ +R +++ F ++ R L+ + Sbjct: 696 ACANDYDAFCNEELKFRHQLKYPPFARLAQIRFTGEDSKETGAFANSIGEECRKLLWAEK 755 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 + VLGP+P+ + RWQ+LL+ + + +I + ++ V Sbjct: 756 AFKNSVQVLGPIPSPIARIARMHRWQMLLKGLDHKAFRAYLRQVNRIIQSKAGAKGPTAV 815 Query: 725 LDVDPI 730 +DVDP+ Sbjct: 816 IDVDPV 821 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 5/99 (5%) Query: 5 HVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VA+ PL +T Y LP+ + G RV VP G+++ G ++ + E + ++ Sbjct: 19 EVAVAAPLEQTLTYKLPQDQAPLAEPGKRVLVPMGRRRV-TGYILGPAPKPEG--FKARS 75 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 ++++LD P+F ++ L W ADYY +P+G + +LP Sbjct: 76 ILDILDELPLFPEAMVPLFRWLADYYIYPLGLTIKESLP 114 >UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9F7_9BACT Length = 769 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 268/762 (35%), Positives = 377/762 (49%), Gaps = 54/762 (7%) Query: 16 FDYLL----PEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDAS------ELPLNELKAV 63 FD LL PE + +A G VRVP R+GIV + + + P+ +LK + Sbjct: 12 FDKLLHYRAPESLREQAQVGMLVRVPI-LNGLRLGIVGEMLEIGEGGGGLDFPVEKLKTL 70 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG---------RPAANAP 114 + P + +L W A YY P+ ++ LP +R AA Sbjct: 71 SAFVYPFPALPPDLLQLARWMAGYYAAPLDGIIETMLPAAVRHAAGLKYEKYLSLAAPPS 130 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ---------VATLEFNDAAL 165 +D R + A A L + RDQ ++ L AA Sbjct: 131 PPPPPPATSAAPLDAEEFARLEHRAPAQAKLY--RFLRDQFRPQKKSLVLSRLGITAAAC 188 Query: 166 QALRKKGLCDLASETPE----FSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSA 219 AL K+GL + E DW T +V+ LN EQ TA A+ + AA F Sbjct: 189 NALVKRGLIREETRRVERVAYADDWATGESVAALPHNLNDEQQTAADALRASLAARQFGV 248 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-----PVE 274 LL GVTGSGKTEVYL + + LA G + +VPE+ LTPQT+AR R R A V Sbjct: 249 TLLHGVTGSGKTEVYLRAVHDALADGGGVVFLVPEVALTPQTVARLRGRLEAIAPGHNVV 308 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR 334 V HS L+D ER+ WL GEA +V+G RSA+F P +NL +IV+DEEH+ +YKQ E R Sbjct: 309 VWHSHLSDGERMDGWLALATGEARVVVGARSAIFAPVRNLRLIVVDEEHEPAYKQDETPR 368 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL 394 YH RD+AV RA +LGSATP+LET N + KY LLRLT+R + ++DL Sbjct: 369 YHGRDVAVMRAKLAGAHCLLGSATPSLETHANAKAGKYSLLRLTKRIDTRQLPHIEIVDL 428 Query: 395 KGQKVQ----AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 + + +Q L+ L+ M+ + Q ILFLNRRG++ A+ C CG + ECP C Sbjct: 429 RIEAMQNRGFTTLSKKLVNAMQARFERREQTILFLNRRGYSSAMQCRKCGHVEECPHCSV 488 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCP--SCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 T H++ LRCH C Q+ P CP +C + + G+GT+++E+ + + P I Sbjct: 489 SLTYHRSDETLRCHLCGYQKTAPLVCPNATCRAPDIRWRGMGTQRVEEAVRRVLPHARIE 548 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 R+D DT +K Q L+E G +L+GTQM+ KG FP+VTLV L+D D ++ DF Sbjct: 549 RMDADTMQKKNRFRQLLSEFRAGKIDLLVGTQMIGKGLDFPNVTLVGLVDADISMHIPDF 608 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 R+ ER QL QVAGRAGR + GEV++QT P+ +Q + YD FAE L R Sbjct: 609 RANERTFQLLVQVAGRAGRGDRAGEVIVQTFTPQAEAIQFSRHADYDGFAEAELKMRNAF 668 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 PP + N + F +Q L+ A ++ + GP P K +R Sbjct: 669 GYPPARHLIHHLFRGPNPEKLQFFSEQWAKLVEKELGA--RVELRGPSPCPIEKIKDEYR 726 Query: 689 WQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +Q L + + + I+ L T ++ V+DVDP+ Sbjct: 727 YQ--LWYFTNANVSAIVADLARLRATFAWPEQLVQVIDVDPV 766 >UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C6J2B4_9BACL Length = 854 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 229/607 (37%), Positives = 333/607 (54%), Gaps = 35/607 (5%) Query: 152 RDQVATLEFNDAALQALRKKGLCDLASETPEFSD-WRTNYAVSGERLRLNTEQATAVGAI 210 +D ++TL+ ++ L +KG + + F D ++ E L EQ + Sbjct: 250 QDVLSTLQVTAGTVKKLAEKGFA-VIEDVEVFRDPYQGRRFQRSEPLPRTPEQELVYRRL 308 Query: 211 HSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER 268 D +LL GVTGSGKTEVYL +E +A G+QA+V+VPEI LTPQ + RF+ R Sbjct: 309 AETLDAQRHEVFLLHGVTGSGKTEVYLQTIERCIASGRQAIVLVPEISLTPQMVERFKGR 368 Query: 269 FNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYK 328 F A V VLHS L+ ER W K + G + IG RSA+F PF LG+IV+DEEH++SYK Sbjct: 369 FGAKVAVLHSRLSTGERYDEWRKIREGRVEVAIGARSAIFAPFSRLGLIVMDEEHETSYK 428 Query: 329 QQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR-------LLRLTRR- 380 Q+E +YHARD+AV RA +ILGSATP+LE+ + LL + +R Sbjct: 429 QEETPKYHARDVAVRRARQHGAAVILGSATPSLESYHAARSGGGEFGEFAPILLEMKQRP 488 Query: 381 AGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 AG+ P +Q ++D++ ++++ G + AL + L+ Q +L LNRRG++ ++C Sbjct: 489 AGSRLPGVQ-IVDMR-EELKEGNRSMFSRALHQGIAARLERGEQTVLLLNRRGYSTFVMC 546 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CG++A CP CD T HQ ++LRCH+C P CP CGS H+ G GT+++E Sbjct: 547 RTCGYVASCPNCDISLTYHQKSNNLRCHYCGYAEAAPSVCPECGSEHIRYFGTGTQRVEG 606 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 LA LFPG+ + R+D DTTS KGA E+ L +L+GTQM+AKG FPDVTLV + Sbjct: 607 ELAKLFPGIRVIRMDVDTTSEKGAHEKLLQAFREKKGDVLLGTQMVAKGLDFPDVTLVGV 666 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 + D AL DFRSAE+ QL TQVAGRAGR GEV +Q++ PEH + Y + Sbjct: 667 IAADTALNFPDFRSAEKTFQLLTQVAGRAGRHQLPGEVFIQSYMPEHYSIVHASGHDYLS 726 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS-SPLADEKLW---- 671 F + L R+ M PP++ ++V +++ PL L+ N A + W Sbjct: 727 FVREELKTRKTMHYPPYSRLILVTL---SHEKLPLLLRMAENFAGDLRAKAQRQGWFGSL 783 Query: 672 ---------VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 +LGPV + P+ R+R Q ++++ + ++ T A ++ Sbjct: 784 DRFVPAALDILGPVASPIPRIKNRYRIQCMVKYRGDLDAVSLVQETAAATLDQWRDALLQ 843 Query: 723 WVLDVDP 729 +DVDP Sbjct: 844 ISIDVDP 850 Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/108 (32%), Positives = 54/108 (50%), Gaps = 6/108 (5%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + VP R FDYL+PE M ++ G RV VPFG++ + G VVS+ + E+ Sbjct: 5 MAKVIVDVPSRETDRPFDYLIPESMAGWIEVGSRVGVPFGRRTVQ-GFVVSLHEQPEMDP 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +K + E+LD P + L W + Y + L +P L+ Sbjct: 64 ARMKPIQELLDMMPPLPPDLVELAEWMSRKYACSLIAALQAMIPAALK 111 >UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-superfamily II helicase n=11 Tax=Clostridiales RepID=C4ZEW0_EUBR3 Length = 753 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 247/755 (32%), Positives = 390/755 (51%), Gaps = 50/755 (6%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDS 69 L +TF Y +P+ + ++ G V +PFG + G V+ V+D E K ++ + Sbjct: 14 LDKTFQYSIPDELLCDIRPGVCVDIPFGSRT-ITGYVIEVTDKPEYDPARTKPLIGIKAD 72 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDL 129 + L W Y + L +P+ +Q + + + A+ + Sbjct: 73 SVAVEAKLIALAAWIRRNYGSTMNQALKTVIPVK-KQAKEQVSRSI----------ALKI 121 Query: 130 NSLKR-------SPKQQQALAALRQGKIWRDQVATLEFN---------DAALQALRKKGL 173 + +K K+Q+A A L + I D A LE++ A ++AL + G Sbjct: 122 DKVKARAQLALCEAKKQKAKARLFRALIDADDGARLEYSFVTGKLSVSAATIRALEQSGF 181 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKT 231 ++ +++ + + + +V LN Q + V AI AA + +L+ GVTGSGKT Sbjct: 182 IEVITQSG-YRNPVEHMSVDTYDKVLNAAQQSVVDAIEGDIAAGLRNTYLIKGVTGSGKT 240 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVY+ ++ + + G+QA+V++PEI LT QT+ RF RF V +++S L++ ER + + Sbjct: 241 EVYMELIAHCIQSGRQAIVLIPEIALTYQTVMRFFARFGNRVSIINSRLSNGERYDQFER 300 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 AKNG+ I+IG RSALFTPF NLG+I+IDEEH++SYK + RYHAR++A+ A Sbjct: 301 AKNGDIDIMIGPRSALFTPFSNLGLIIIDEEHENSYKSESVPRYHAREVAIEYARMSDAI 360 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAGLAPALITR 410 ++LGSATP++++ + YRLL L +R + RP + V+DL+ Q+++ G L TR Sbjct: 361 VVLGSATPSVDSYYKAKTGVYRLLELDKRVDD-RPLPKCEVVDLR-QELREGNRSILSTR 418 Query: 411 ----MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 M + L Q +LFLNRRG + + C CG++ +CP CD + H + CH+C Sbjct: 419 LQELMEERLLNGQQTMLFLNRRGKSAFMSCRACGFVVKCPHCDVSLSEHSGGVMV-CHYC 477 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 ++PVP+ CPSCGS ++ GT+++E +A FP I R+D DTT K A E+ L Sbjct: 478 GYRQPVPKVCPSCGSKYISGFKAGTQKIEAMVAKRFPQARILRMDYDTTRAKDAYEKILQ 537 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 A ILIGTQM+ KGH F +VTLV +L D +L DF +AER L TQ AGRAG Sbjct: 538 AFSNHEADILIGTQMIVKGHDFSNVTLVGVLAADMSLHVNDFHAAERTFALLTQAAGRAG 597 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R G VV+QT+ P+H ++T + Y+AF ++ + RR+M PP + ++V + Sbjct: 598 RGKLPGNVVIQTYDPDHYAIRTAKEQDYEAFYDKEIEYRRLMNYPPVWNMLLVHVTSPDE 657 Query: 647 QHAPLFLQQLRNLIL---------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 QQ+ ++ L SP + ++GP A K +R I ++ Sbjct: 658 SECSSMAQQVYDIALQMISHTDENQSPDDRHLIQLIGPADATIAKVNDIYRKVIYMKTSD 717 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG 732 L I + + + D +P+ G Sbjct: 718 YAALISIKDVIEQAVKADTAMKHANISFDFNPMSG 752 >UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna RepID=B0S138_FINM2 Length = 789 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 202/579 (34%), Positives = 330/579 (56%), Gaps = 27/579 (4%) Query: 133 KRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 KR+ QQ+ + L++ ++ + +A + ++AL +K + + + E + Sbjct: 187 KRANAQQKIVDMLKKESNILYSELLAKTNTTSSVVKALEEKKVVKIYFK--EVDRIVVDD 244 Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 S ++ LN++Q A +I + F+ LL GVTGSGKTEVYL ++E +L +GK ++V Sbjct: 245 TKSYHKISLNSQQENAYNSI--LENQFN--LLHGVTGSGKTEVYLHLVEKMLNEGKDSIV 300 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQTI RF RF V ++HS LN +E+ + K NGE IV+G RSA+F+P Sbjct: 301 LVPEISLTPQTIERFEGRFPGKVAIIHSKLNINEKFEQFRKMYNGEYKIVVGARSAVFSP 360 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 FKNLG+I+IDEEH++SY ++ +Y+A D++ +RA ++LGSATP +E N + Sbjct: 361 FKNLGLIIIDEEHETSYVSEKNPKYNAIDISRFRAEYNNAKLLLGSATPGVEEYNNALKG 420 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLN 426 +Y L+ + +RA N P ++D++ ++++ G + L+ +++++L Q ILFLN Sbjct: 421 QYNLIEMNKRANNTTPVDCTIVDMR-KELETGNMRMFSKVLLNKIQENLNNKKQTILFLN 479 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 +RG + C CG++ +C CD T H+ ++ L CH C P+ CP+CGS + Sbjct: 480 KRGHTSFISCRRCGYVLKCDSCDVSMTYHKTKNRLICHMCGRTALKPKVCPNCGSKFIKE 539 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G GT++LE+ LFP I R+DRDTT+ K E+ ++ ILIGTQML+KG Sbjct: 540 FGAGTQKLEEETRELFPDARIVRMDRDTTNTKKDYEKIYDMMNNQEIDILIGTQMLSKGF 599 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 FP+VTLV ++ D +L D++S E+ QL TQVAGRAGRA +G+V++QT+ P++ + Sbjct: 600 DFPNVTLVGVMAADISLNLGDYKSNEKTFQLITQVAGRAGRAEYEGDVIIQTYKPDNFAI 659 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI------ 660 + Y F E+ + R+ PP+ + + N A + ++ N + Sbjct: 660 TSAALHDYKMFYEKEIKLRKSFNYPPFYRILNINISSRNRNVAMKKINEVSNYVAALIRR 719 Query: 661 --LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 LS+ L + GP P+ + +R+ + + P+ Sbjct: 720 YKLSTTLIN------GPHPSPIERINNMYRFDLYYKFPN 752 >UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL2_SYNWW Length = 802 Score = 384 bits (987), Expect = e-105, Method: Compositional matrix adjust. Identities = 211/524 (40%), Positives = 309/524 (58%), Gaps = 17/524 (3%) Query: 192 VSGERLRLNTEQATAVGAIHSA---ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQA 248 VS ++L+LN EQ A +I + AD +LL GVTGSGKTE+Y+ +E V+ QG++A Sbjct: 260 VSDKKLQLNREQEAAFRSIEKSLIKADR-EEFLLFGVTGSGKTEIYIRSVEKVIEQGRKA 318 Query: 249 LVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALF 308 +V+VPEI LT +A F R + V+HS + D ER W + + GE +V+GTRSA+F Sbjct: 319 IVLVPEIALTRHLLADFSSRIEN-MAVMHSAMPDGERHDEWRRIRQGEVDLVLGTRSAIF 377 Query: 309 TPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQ 368 P LG+I+IDEE +SSYKQ+E +YHARD+A RA + +++GSATP+L+TL Sbjct: 378 APLDQLGLIIIDEEQESSYKQEETPKYHARDVARKRAELDGAVLLIGSATPSLDTLYRAV 437 Query: 369 QKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG-----LAPALITRMRQHLQADNQVIL 423 + +LL L +R A+ I V ++K KV + L+P L+ ++ LQ Q IL Sbjct: 438 KGDMKLLTLKQRIAQAKMPIIQVENMK--KVASSHKSRVLSPLLLEKLSTTLQRGEQSIL 495 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 F+NRRG++P LC CG I CP C T HQ CH+C+ Q P CP CGS H Sbjct: 496 FINRRGYSPLSLCRSCGNILSCPSCSVGMTYHQDMGKNLCHYCNYQANPPSSCPICGSRH 555 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 + +GLGT+++E+ LFP I R+D D++ + G E L + R ILIGTQM+A Sbjct: 556 MSHMGLGTQRVEEECRQLFPSAHIQRLDLDSSKKAGFQESILERMERKEIDILIGTQMVA 615 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KG +FP V+LV ++D D L DFR+AER QL Q AGR+GR+ GEV++QT +P + Sbjct: 616 KGLNFPSVSLVGIVDADSMLNLPDFRAAERCIQLLLQAAGRSGRSHLPGEVIIQTFNPAN 675 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR---NLI 660 PL + + Y AF Q + +RR++ PP+T + + + A + + L N I Sbjct: 676 PLFSMIQKQDYLAFFYQEIKQRRLLNYPPFTQLLRIVCSAQSLDMARMVAESLSREINDI 735 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + + ++ + +LGP P K R+RWQ+ L+ + + L+ I Sbjct: 736 IDA--KEDDIEILGPAPCPLLKIRNRYRWQLTLKCENMLLLKSI 777 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 7/115 (6%) Query: 6 VALP-VPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL-- 60 + LP + L T+ Y++P + + G RV V G ++ V + D E+ N + Sbjct: 8 INLPAMSLDHTYTYIVPPALKEEIAVGKRVLVELGNRKVE-AFVSEILDEGEIDGNAIAA 66 Query: 61 -KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 K V++VLD EP+F H+++ L W AD Y P+ VL P LLR+ + P Sbjct: 67 IKPVLKVLDREPLFDHNLFILAEWMADTYLCPLSLVLKLMTPRLLRKKKAVKVTP 121 >UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rubrum RepID=PRIA_RHORU Length = 811 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 285/809 (35%), Positives = 392/809 (48%), Gaps = 103/809 (12%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA-GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 PV V LP+PL +DY +P GM A G VRVP G+++E IG+V + A E P L Sbjct: 23 PVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGRREE-IGVVWG-AGAGETPPERL 80 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG---------RPAA 111 K ++ + P + + W A Y P G VL AL + RP+A Sbjct: 81 KPLIGFPECPP-LPAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRRPSA 139 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL------ 165 A +GQ + SP +Q+ LA L D L F A L Sbjct: 140 GQRAAGQRA--EGQGPLPGGARLSPGRQRVLAVL-------DDHPGLPFAGADLAREAAV 190 Query: 166 -----QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD-TFSA 219 A+ K GL + + + E+S + G L + +Q A + +A D FS Sbjct: 191 GPAVVAAMAKAGLLEAVTRSNEWSPQAPDADRPGPLL--SADQQAAADGLRTALDQGFSG 248 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 LL GVTGSGKTEVY + L +G+QALV++PEI L Q RF +RF A HS Sbjct: 249 LLLEGVTGSGKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQ 308 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 + + R AW G A +V+G RSALF P+ +LG+I++DEEHDS++KQ+EG Y+ARD Sbjct: 309 MGAAARRRAWRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARD 368 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR-AGNARPAIQHV------- 391 +AV RA P +L SATP+LET+ N +Q +YR L L RR G P I + Sbjct: 369 MAVVRARLGGFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPP 428 Query: 392 -----LDLKGQKVQAGLA------------------------------------------ 404 D G GLA Sbjct: 429 QKWLPTDFAGPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLS 488 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 P LIT + + L A QV+LFLNRRG+AP LC CG +CPRC + H+ LRCH Sbjct: 489 PPLITAVEETLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCH 548 Query: 465 HCDSQRPVPRQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HC Q+P+P CP+CG + L P G G E+L + A FP + DT + Sbjct: 549 HCGYQQPIPETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAA 608 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 + ++IGTQ++AKGHHFP +TLV ++D D L D R++ER QL QVAG Sbjct: 609 LATRIANHDIDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAG 668 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV--IVRA 641 RAGRA + G V++QT P HP+++ L F E AER+ + +PP+ V ++ Sbjct: 669 RAGRAERPGRVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVISG 728 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 ED +Q + + + L VLGPVPA GR R ++LL+ V++ Sbjct: 729 EDSAR------VQAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKV 782 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPI 730 Q ++ L+L++ P VK +DVDPI Sbjct: 783 QPVVRHWLSLVSIPPG---VKVQVDVDPI 808 >UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S0_9FIRM Length = 809 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/602 (36%), Positives = 329/602 (54%), Gaps = 28/602 (4%) Query: 133 KRSPKQQQALAALRQGKI-WRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 K + KQ + +L +G + + + E N + L DL EF + Sbjct: 208 KNATKQVSVIKSLEKGPLLYETLIHKTEANRGIITKLE-----DLELIKSEFREKNDELD 262 Query: 192 VS----GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 +S + + LN EQ + I+ + + +LL GVTGSGKTEVY+ + + + +GKQ Sbjct: 263 LSIPEEDKEVELNDEQKKVLN-IYLNEENTNKFLLHGVTGSGKTEVYIKMFKEQINKGKQ 321 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 L +VPEI LTPQ + +F+ V ++HS L ++R+ W K ++G+A IV+G RSAL Sbjct: 322 CLFLVPEIALTPQMMRNIYYKFDGDVAIMHSKLTMAKRIKEWDKVRSGKAKIVLGARSAL 381 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 F PFK+LG+IVIDEEH+++YK + RY +LA + ++LGSATP++E+ Sbjct: 382 FMPFKDLGLIVIDEEHENTYKSSQTPRYETIELANFICDGIGAKLVLGSATPSVESYYKA 441 Query: 368 QQKKYRLLRLTRRA-GNARPAIQHVLDLKGQK---VQAGLAPALITRMRQHLQADNQVIL 423 + +YRLL + RA G P +Q ++D+ + ++ ++ L ++R+ L Q+IL Sbjct: 442 FKGEYRLLEMENRANGKDFPEVQ-IVDMTDEMRSGNRSSISRTLSKKIRERLDRKEQIIL 500 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 F+NRRGF+ + C CG+I ECP CD T H + LRCH+C ++ P CPSCGS Sbjct: 501 FMNRRGFSTYVFCRKCGYIEECPNCDVSLTYHANTNSLRCHYCGYEKRAPEVCPSCGSDK 560 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 + G GT+++E + LFP I R+D DTT + G++E+ L++ A ILIGTQM+ Sbjct: 561 IKRAGTGTQKVEAAVRELFPDAKILRMDFDTTRKAGSMEKILSDFREEKADILIGTQMVV 620 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGH F +VTLV +L D AL D S +R QL TQ +GRAGRA K+GEVV+QT+ P + Sbjct: 621 KGHDFANVTLVGILLADTALNFPDINSPQRTFQLCTQASGRAGRASKEGEVVMQTYMPNN 680 Query: 604 PLLQTLLYKG---YDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNN--QHAPLFLQQL 656 +TL+Y Y +F + R M PP+T + V ED N +H +++ Sbjct: 681 ---KTLVYSSMHDYKSFYAYDIEYRMKMNYPPFTEILGIFVANEDENKSVEHINHVYKRI 737 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 L+ D KL+ P+ A K ++ ILL++ ++ I I Sbjct: 738 EELLKEKNREDVKLY--QPMDAFIHKLKNKYIMHILLRYNKDDEIKKEIRNIFNDIKREV 795 Query: 717 DS 718 DS Sbjct: 796 DS 797 >UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RII3_9MOLU Length = 736 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 246/744 (33%), Positives = 377/744 (50%), Gaps = 57/744 (7%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVV----SVSDASELPLN---ELKAVV 64 L TFDYL + +G RV + FG Q+ IG V S S EL + + + Sbjct: 20 LDTTFDYL--ANTEIASGVRVTIAFGYQR-IIGYVTGCRYSNSTKEELETAAGFKYRYIS 76 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 EV+D P+ + L L A P L LP Q +P+ N + + + Sbjct: 77 EVIDERPLLNQELQELSLTLAKLTLSPRISCLQAMLP---PQLKPSTNKSVGIKYQ-KVI 132 Query: 125 QAVDLNSLKRSPKQQQA-----------LAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + ++ ++ ++ KQQ+A L A + D++ Q L + Sbjct: 133 KVINEDATLKTVKQQEAYQYLKTHPDTPLKAFPYSRGLLDKLIEQRVTVIIEQELYRDPY 192 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 D E EFS L +Q V I S DT+ L+ GVTGSGKTEV Sbjct: 193 LDDQKEEHEFS--------------LTVDQQKVVNGIMSKIDTYHTALIHGVTGSGKTEV 238 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL + + V+ K L++VPEI LTP + F+ +F V +LHS L+ ER + + Sbjct: 239 YLHLSKYVIRNNKTVLMLVPEISLTPMMVNAFKHKFGKEVAILHSKLSAGERYDEYRRIL 298 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 N E IV+G RSA+F P + +G+I++DEEHD SYKQ+ RY +A R P+I Sbjct: 299 NSEVKIVVGARSAVFAPLEKIGLIILDEEHDPSYKQESKPRYQTTQIARIRGQYHNCPVI 358 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQ---KVQAGLAPALIT 409 LGSATP+LE+ Q+ Y L L +R P I+ ++D+ + K + + A+ Sbjct: 359 LGSATPSLESYSRGQKGIYDLYELPKRINQFPLPKIE-LIDMADEIRNKNYSLFSKAMKE 417 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 +++ L D QVIL LN+RG+A + C DCG + +CP CD T H+A H LRCH+C+ Q Sbjct: 418 QIQTCLDHDEQVILLLNKRGYATYVRCLDCGEVIKCPHCDVTLTYHKADHKLRCHYCEHQ 477 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +PR CP C S L VG GT+++E+ L +F G + R D DTT +K ++ L + Sbjct: 478 IEMPRLCPHCSSERLKLVGAGTQKVEEQLETIFDGAKVIRYDVDTTKQKDGHQKLLDKFA 537 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 R IL+GTQM+AKG F +VT V +L+ D +L DFR+ ER QL QV+GR+GR Sbjct: 538 RKEGNILLGTQMIAKGLDFENVTFVGVLNADISLNIPDFRANERTFQLLEQVSGRSGRGQ 597 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHN-- 645 K+G V++QT++PEH +LQ + Y F ++ + R++ PP+ ++++ +D Sbjct: 598 KEGTVMIQTYNPEHFVLQCVKNHDYLRFYQEEMKTRKLAAYPPYVHLVSILIQGKDEEVV 657 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 NQ A + L+ + +K+ +LGP +L + +R +I+++ + +L ++ Sbjct: 658 NQSAVQIKEYLQKQL-------DKMAILGPANSLIYRMQDIYRKRIMIKFTNSKQLYPVL 710 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 N KV V D +P Sbjct: 711 EKMSDFYN--KKGNKVHVVCDFNP 732 >UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI73_SYNFM Length = 814 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 217/540 (40%), Positives = 308/540 (57%), Gaps = 7/540 (1%) Query: 198 RLNTEQATAVGAI--HSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 RL +Q A+ + A+ F ++L GVTGSGKTEVY+ ++E L +G+ ALV+VPEI Sbjct: 272 RLTPDQQEVFDAVSPYLASGPFQPFMLFGVTGSGKTEVYMRLVEETLKRGRGALVLVPEI 331 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 GL+ Q A FR+RF + V HSG+ + R W G +V+G RSA+F P ++ G Sbjct: 332 GLSTQLEALFRQRFGERLAVWHSGVPEGARHDQWRDILAGRRTVVLGARSAVFMPVRDPG 391 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +IV+DEEHD SYKQ + RYHARD A+ RA IP++LGSATP+L+T+ + ++YR L Sbjct: 392 LIVVDEEHDPSYKQDDHLRYHARDAALVRARLLGIPVVLGSATPSLQTIHQSRLERYRPL 451 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 L RR + ++D++ + +A L+ L T + + LQA +Q +LFLNRRGFA Sbjct: 452 LLPRRILDRPLPTLEIVDMRRESSRARILSHRLRTALAETLQAGDQALLFLNRRGFATCF 511 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQL 494 LC CG + +C C T HQ + LRCH+C + VP +CP+CG L P+G GTE++ Sbjct: 512 LCGVCGAVLQCSSCSVSLTYHQREKILRCHYCGKEEAVPERCPACGHAGLFPLGFGTERV 571 Query: 495 EQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 E+ + P I RIDRDT SR L + L V G A +LIGTQM+ KGH FPD+TLV Sbjct: 572 EEEVRRELPDARIVRIDRDTVSRPEDLVESLDAVRSGRANVLIGTQMVGKGHDFPDITLV 631 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 +++ D AL DFR+ E QL QVAGRAGR + G V+LQT++ H L+ +L Y Sbjct: 632 GVINADTALQFPDFRAGETTVQLLMQVAGRAGRGEQPGRVILQTYNQFHYTLEAVLALDY 691 Query: 615 DAFAEQALAERRMMQLPPWTSH----VIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + F + L R ++ PP+ V R+E + A R + Sbjct: 692 ERFCDIELQSREQLRYPPFARFLKFLVTSRSEAQTREAARRLAALCRETAERFDASGRPA 751 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 VLGP PA K R+RW + ++ + LQ L+ + P R+V+ +D DP+ Sbjct: 752 AVLGPSPAPLLKLKDRYRWHVFVKAWTSRDLQDFTETVLSGARSDPALRRVQLAVDRDPM 811 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 12/129 (9%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDA---SELP 56 P A V++ L +T Y +P + A G RV VP G++ G++++ +D P Sbjct: 4 PFAEVSIFSALEKTLHYAIPSELNAGARPGARVLVPLGRRSA-TGLILARADCPPPDMPP 62 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK ++ VLD PV T + L W A YY +P+G+VL ALP A NAP Sbjct: 63 EVRLKPILAVLDDAPVLTPDLIALCRWLASYYFYPVGEVLQTALP------SGATNAPQV 116 Query: 117 YWFATEQGQ 125 + T G+ Sbjct: 117 FVRLTPAGE 125 >UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbiobacterium thermophilum RepID=Q67PR6_SYMTH Length = 741 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 266/741 (35%), Positives = 378/741 (51%), Gaps = 38/741 (5%) Query: 14 RTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN--ELKAVVEVLDS 69 + F YL+P + + G VRVPFG ++ +G+ V +E P LK + +L Sbjct: 12 KLFTYLVPRSLAGRLTPGQWVRVPFGGRR-LVGLYVG---PAERPPEGVALKEIAGLLPD 67 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDL 129 P + +L W AD Y L LP R+ Y + +A+ Sbjct: 68 IPPIPAPLVQLARWTADRYLSTFPAALRLLLPTEARRQEVRTLTITNYRLNVDDVEALVS 127 Query: 130 NSLKRSPKQQQALAALRQ--GKIWRDQVATLEFNDAALQALR---KKGLCD---LASETP 181 +R+P+Q + LA + + G+ R QV + ++ +R +KG +A Sbjct: 128 ELRRRAPRQAELLAYMARVGGEAERAQVLA-DLGESIAGPIRVALEKGWLTAGRVARRRD 186 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW----LLAGVTGSGKTEVYLSV 237 F+D A L EQ A+ +I A+ L+ GVTGSGKTE+YL Sbjct: 187 PFADEHVEPAPPPV---LTPEQEQALASIRQELIAPPAFRQPVLVHGVTGSGKTELYLRA 243 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + V GK A+ +VPEI LTPQ I RFR RF V VLHS L+ ER W + + GE Sbjct: 244 IALVREMGKNAICLVPEISLTPQMIQRFRARFGGDVAVLHSALSAGERFDEWQRIRRGEV 303 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGS 356 +IV+G RSA+F PF+N+G+I+IDEEH+ SYKQ+ YHAR++A RA E ++LGS Sbjct: 304 SIVVGARSAVFAPFENVGLIIIDEEHEQSYKQEAPPPAYHAREVAAERARLEGALLVLGS 363 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMR 412 ATPALE+ Q YRL+ L R N RP L ++++AG + AL+ + Sbjct: 364 ATPALESFHLAQTGVYRLVSLGHRIDN-RPLPPVTLVDMREELRAGNRSIFSRALVEALD 422 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 Q L A Q ILFLNRRG+ ++C CG +C C T H HL CH+C PV Sbjct: 423 QTLSAREQAILFLNRRGYNTFIMCRSCGEAIQCVHCAVALTYHLGDDHLACHYCGYTAPV 482 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P CPSCGS + +G GTE++EQ L L+P V ++R+D DTT RKGA L Sbjct: 483 PLVCPSCGSDKIRHLGAGTERVEQELQRLYPHVRVARMDVDTTRRKGAHAAILKRFADHE 542 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 +L+GTQM+ KG FP VTLV ++ D +L DFR+AER QL TQVAGRAGR + G Sbjct: 543 VDVLVGTQMITKGLDFPGVTLVGVVLADTSLNLPDFRAAERTFQLVTQVAGRAGRGDRPG 602 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAP 650 V++QT+ P+H LQ Y F + + R+ + PP+ H+++ ED A Sbjct: 603 RVIVQTYQPDHAALQAAAEHDYHRFFAEEIRFRQELDYPPFAHMIHLVISGEDEAAVAAT 662 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 Q + ++ + +LGP PA K G++R+ ++L+ P + + A Sbjct: 663 --AQNVHRVLAEGGFGGQ---ILGPAPAPLAKLRGKYRYHLVLKGPDVRAMAAEVKACFA 717 Query: 711 LINTI-PDSRKVKWVLDVDPI 730 SR V +DVDP+ Sbjct: 718 AARGKWRASRSVSLSVDVDPV 738 >UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobacteriales RepID=C7M9J5_CAPOD Length = 817 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 214/611 (35%), Positives = 341/611 (55%), Gaps = 39/611 (6%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAA-----------LRQGKIWRDQVATLEFNDAALQA 167 + TE+G L LKRS KQ++ + A L+ K+ + + L++ Sbjct: 192 YQTEEGLQKALELLKRSEKQKKLIMAYFNYINREVLPLKAEKLLEEASVS----TTVLKS 247 Query: 168 LRKKGLCD---LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAG 224 + +KG+ + L + F+D VS +++ LN Q A+ I T + LL G Sbjct: 248 VIEKGIFEEYYLQKDRVSFADS----DVSTKKV-LNEVQEEALHQIQKQFQTKNTVLLQG 302 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VT SGKTE+Y+ ++ L GKQ L ++PEIGLT I RF+ F + V HS + +E Sbjct: 303 VTASGKTEIYIELINQYLKAGKQVLYLLPEIGLTVHLINRFKNHFGKSLSVYHSKYSTNE 362 Query: 285 RLSAWLKAKNG--EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLA 341 R+ W N +A +++G RS+++ PF+ LG+++IDEEHD+SY+Q E R ARD A Sbjct: 363 RIEVWNNVLNNSPKAQLIVGVRSSVYLPFRQLGLVIIDEEHDNSYRQFEPAPRMQARDTA 422 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ---- 397 + A+ + +LGSATP+LE++ NV+ +KY + L++R + P I ++D+K + Sbjct: 423 IMLANIFKAKTLLGSATPSLESMHNVKTEKYGFVYLSKRYADFLPPIIELIDIKDKHHRK 482 Query: 398 KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA 457 ++ + LI + L QV+LF NRRG+AP + C CG + +CP CD T HQ+ Sbjct: 483 RMNGHFSDVLIKEITNTLSQGRQVLLFQNRRGYAPIVQCMQCGTVPQCPHCDVSLTFHQS 542 Query: 458 QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 + LRCH+C P+P+ C +CGS L G GTEQ+ + L LFP + I R+D+DTT+ Sbjct: 543 SNQLRCHYCGYAIPMPKACIACGSVDLRTKGFGTEQISKELEVLFPNIAIDRMDQDTTNG 602 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 K E+ L++ + +IL+GTQM+ KG F ++ LV +++ D + S D+R+ ER QL Sbjct: 603 KYGYEKILSKFEQQETQILVGTQMITKGLDFENIGLVGVMNADALIHSPDYRAYERSFQL 662 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 QV+GRAGR+ +QG+V +QT++P++P++Q +L + + + ER+ PP+ + Sbjct: 663 LLQVSGRAGRSAQQGKVFIQTYNPQYPVIQQVLQNDFRGMYQSQIEERQSFLYPPFVQMI 722 Query: 638 IVRAEDHN----NQHAPLFLQQLRNLILSSPLADEKLWVLGP-VPALAPKRGGRWRWQIL 692 + + N N+ A F LR + S D VLGP P ++ R + ++ Sbjct: 723 KITLKHSNFNQVNESAEWFANTLREVFASQRGID----VLGPEFPPISRIRNEYLKDVLV 778 Query: 693 LQHPSRVRLQH 703 HPS V L+H Sbjct: 779 KVHPSEVSLRH 789 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 4/103 (3%) Query: 1 MPVAHVALPVPLPRTFDYLL--PEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M V LP+PL + F Y + E ++ G RV VPFGK + IV + P Sbjct: 1 MYFVDVILPLPLSKLFTYRINEDEAHFLQMGMRVAVPFGKSKVYTAIVHHIHTVE--PSY 58 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 + K + +LD P+ T W AD+Y +G+VL ALP Sbjct: 59 DTKDIEYILDETPIITPQQIEHWQWIADFYMCTLGEVLKSALP 101 >UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales RepID=C6VSU2_DYAFD Length = 831 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 207/583 (35%), Positives = 333/583 (57%), Gaps = 25/583 (4%) Query: 161 NDAALQALRKKGLCDLASETPEFSDWRTNY----AVSGERLRLNTEQATAVGAIHSAADT 216 +DA+L L KKG+ + +F + + + A + + L Q A IH Sbjct: 257 SDASLNTLIKKGIFE------QFEVFVSRFDDIPAGNMGTITLTDTQQEAFRQIHELFAE 310 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 LL G+TGSGKTEVY+ +++ L G Q L ++PEI LT Q + R R+ F + + Sbjct: 311 KEVVLLHGITGSGKTEVYIELIKQALESGSQVLFLLPEIALTTQIVVRLRKVFGDVMGIY 370 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRY 335 HS +D+ER+ W +G+ V+G RSA+F PF NLG++++DEEH++SYKQ + RY Sbjct: 371 HSKFSDNERVEVWKGILDGKFQFVVGVRSAIFLPFDNLGLVIVDEEHETSYKQHDPAPRY 430 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 +ARD+AV ++ + +LGSATP+LE+ + Q +Y +++ +R GNA ++D K Sbjct: 431 NARDVAVIMSYMHKGKTLLGSATPSLESYFHAQSGRYGFVQMKQRYGNAALPRFELIDTK 490 Query: 396 GQKVQAGL----APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 +K Q + + L++ + +L+ Q ILF NRRG++P L C +C WI+EC CD Sbjct: 491 KEKRQKQMKNEFSSVLLSHLEYNLKNKEQTILFQNRRGYSPYLQCEECNWISECANCDVS 550 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T H LRCH+C + VPR CP CGS + +G GTE++E+ + ++P + R+D Sbjct: 551 LTYHMKARELRCHYCGHKEEVPRTCPHCGSPKVKTMGYGTEKIEEEINVMYPEARVQRMD 610 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 DTT K A +Q +++ GG IL+GTQM++KG F +V++V + D D + +FR++ Sbjct: 611 LDTTRAKNAYQQIISDFEEGGIDILVGTQMVSKGLDFDNVSVVGIFDADRIIHFPEFRAS 670 Query: 572 ERFAQLYTQVAGRAG-RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 ER Q+ TQV+GRAG RA K G+V++QT +P PLL+ ++ Y+ E +AER Sbjct: 671 ERAFQMLTQVSGRAGRRADKPGKVLIQTANPSQPLLEKIINNDYEGMYEAEIAEREKFSY 730 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 PP+T + V + H ++ L ++ L+S L + VLGP P L + ++ + Sbjct: 731 PPFTRLIKVTVK-HIDEGTALRAAKVLAEKLTSHLGASR--VLGPQPPLVERVRNQFLFD 787 Query: 691 ILLQHPSRVRLQHIINGTL---ALINTIPDS--RKVKWVLDVD 728 IL++ R ++ + +I+T+ D + ++ V+DVD Sbjct: 788 ILIKL-EREKINFKAAKSFIQEKVIDTLTDKTLKSIQVVIDVD 829 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 5/105 (4%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN-EL 60 A + LPVP+P F Y +P M +K G RV V FG Q+R+ V S P+ + Sbjct: 13 ADLILPVPIPNLFTYRVPREMASLIKVGARVIVQFG--QKRVITAVVAQLHSNPPVKYQA 70 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 K ++E+LD +P+ T L W A+YY IG+V+ ALP L+ Sbjct: 71 KYILELLDEQPIVTQQQLELFAWVAEYYLCNIGEVMNVALPAGLK 115 >UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=Cyanobacteria RepID=Q3MDW5_ANAVT Length = 849 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 235/629 (37%), Positives = 337/629 (53%), Gaps = 44/629 (6%) Query: 137 KQQQALAALRQ--GKIWRDQVATL-EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVS 193 +Q++ L LR+ G++W ++ + + + L+++ +KG + ++ + Sbjct: 229 RQREILEVLRRRGGELWHSELLQICSTSSSTLKSMEQKGYIAIEEREVLRTEQGQVLDLD 288 Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 +L LN Q A+ IH + F+ LL GVTGSGKTEVYL + +LAQGK ALV+VP Sbjct: 289 TPKL-LNIAQENALVTIHRL-NGFAQVLLHGVTGSGKTEVYLQAIAPILAQGKSALVLVP 346 Query: 254 EIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 EIGLTPQ RFR RF N + V HS L+D ER W + G IVIGTRSA+F P Sbjct: 347 EIGLTPQLTDRFRARFGNNKISVYHSALSDGERYDTWRQMLTGTPQIVIGTRSAIFAPLP 406 Query: 313 NLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLCNV-QQK 370 NLG+I++DEEHDSS+KQ YHAR +A +RA E P++LGSATP+LE+ +V Q Sbjct: 407 NLGLIILDEEHDSSFKQDSPIPTYHARTVAQWRAELENCPLVLGSATPSLESWVSVSQNS 466 Query: 371 KYRL----LRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN------- 419 K+++ L ++ + L + L P I MRQ LQ N Sbjct: 467 KFKIQNSKLTISSSPSSPPSPQSLYSPLPERINSRPLPPVEIVDMRQELQDGNRSIFSRS 526 Query: 420 -------------QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ----AQHHLR 462 Q ILF++RRG + + C CG++ ECP CD HQ A LR Sbjct: 527 LQAALQHLEQTGRQGILFIHRRGHSTFVSCRSCGYVVECPHCDVSLAYHQTEVGAPQLLR 586 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CH+C+ P+ CP C S +L G GT+++ Q L+ FPG+ R D DTT KGA Sbjct: 587 CHYCNYVSVHPKHCPECSSPYLKFFGSGTQRVAQELSRQFPGLKYIRFDSDTTRNKGAHR 646 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 L + G A +L+GTQML KG P VTLV ++ DG L +D+R++ER Q TQVA Sbjct: 647 TLLTQFANGEANLLVGTQMLTKGLDLPQVTLVGVVAADGLLNLSDYRASERAFQTLTQVA 706 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR G V++QT+ PEHP+++ + + Y +F + L +R+ + PP+ +++R Sbjct: 707 GRAGRGDDPGRVIMQTYTPEHPVIEAVRHHDYQSFVQAELEQRQALNYPPYGRLILLRLS 766 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 + P+ +Q I + A+ +LGP PA + R+RWQILL+ Q Sbjct: 767 SFD----PIQVQNTAGAIATVLNANPGFELLGPAPASVMRVANRYRWQILLKFAPEALPQ 822 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPIE 731 + L+ PD V +DVDP+ Sbjct: 823 LPDWDEVRLL--CPDG--VSLTIDVDPLN 847 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQ-ERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 F Y +P + ++ G + VPFG QQ I I + +L ++++ V +V+ S F Sbjct: 43 FTYRIPSQLEIRPGDILSVPFGSQQLGAIAIRLLAEPNIDLAQDKIREVEDVVTSG-FFA 101 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALP 101 + W LL A YY+ P+ V+ ALP Sbjct: 102 SAYWELLNRVASYYYTPLIQVIRVALP 128 >UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachyspira RepID=C0QW49_BRAHW Length = 661 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 209/549 (38%), Positives = 306/549 (55%), Gaps = 26/549 (4%) Query: 197 LRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPE 254 L+LN EQ + I+ + D+ + +LL GVTGSGKTEVYL ++ V+ GKQA+V++PE Sbjct: 121 LKLNEEQEAVLKKINESIDSNNPKTFLLHGVTGSGKTEVYLQAIKKVVDMGKQAIVILPE 180 Query: 255 IGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNL 314 I LTPQTI RF ERF + VLHS L+ + + W K E IVIG RSA+F+P NL Sbjct: 181 ISLTPQTIKRFAERFEGKIAVLHSKLSPNSKYRYWQMIKKDEIKIVIGARSAIFSPTPNL 240 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 G+IVIDEEH++SYK + RYHAR +A YR E ++LGSATP++E+ K L Sbjct: 241 GIIVIDEEHETSYKAGDTPRYHARQVAFYRKSQENATLLLGSATPSIESFYYASIGKIEL 300 Query: 375 LRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFA 431 L L +RA + +LDLK +K + L+ + + L+ Q+ILFLNR+G+A Sbjct: 301 LSLKKRAASVNMPEVKILDLKKEKRADAFPMITQKLVEEINKKLEKKEQIILFLNRKGYA 360 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P + C C + ECP C T H+ ++ + CH+C + + C C H +G GT Sbjct: 361 PVVSCSYCQRVLECPNCSVSLTYHKKKNVVMCHYCGYTQYLDELCDECKIGHFERIGSGT 420 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E++E+ L LFP + R+D+DT E+ G IL+GTQM+AKG FP+V Sbjct: 421 EKVEEHLNILFPNAVVERMDQDTVGGTKNYEKIFKRFSDGEIDILVGTQMIAKGLDFPNV 480 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV +L D +L DFRSAER L TQVAGR+GR K+G V +QT+ P + ++ Sbjct: 481 TLVGVLFADMSLHIPDFRSAERTFNLITQVAGRSGRGDKKGIVYIQTYSPNNYSIECAKN 540 Query: 612 KGYDAFAEQALAERRM-MQLPPWTSHV--IVRA------EDHNNQHAPLFLQQLRNLILS 662 Y +F + + R+ + PP++ V ++R E+ N+ A + + N Sbjct: 541 HDYISFYNKEIENRKAPLNYPPFSRLVRLVIRGIDEKKVENDANKIADMLRMETYN---- 596 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 +K+ +LG K +RW IL++ PS L++ N +NT + K Sbjct: 597 ---DSDKIIILGATACAMSKLNKYYRWNILIKTPSHSLLKNFFNK----LNTNFAADKGN 649 Query: 723 WV-LDVDPI 730 ++ +D+DPI Sbjct: 650 YIEIDIDPI 658 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 7/100 (7%) Query: 6 VALPVPLPRTFDYLLPEGMTVK-AGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKA 62 V +P+ R Y P+ + GCRV P + + GIVV + + +KA Sbjct: 5 VVFNLPIDRILTYRKPDEINDSLVGCRVVAPIKGKNNK-GIVVEEVETIDGNYKVYPIKA 63 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI 102 + D EP+ + ++L W ++YYH G+ LF ALP+ Sbjct: 64 RI---DLEPICSDKEFKLAKWMSNYYHSSFGEALFAALPV 100 >UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB39_9FIRM Length = 697 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 223/625 (35%), Positives = 337/625 (53%), Gaps = 25/625 (4%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 L TF Y + V+ GCRVRV F + +G V + S+ +K V+EV+D +P Sbjct: 12 LRNTFTYSCEQD--VEVGCRVRVEFNNRT-LVGFVEEIDVESDFK--NIKPVIEVIDEKP 66 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + + + L + AD+Y LP LR P++ + E + ++ Sbjct: 67 LLNNELKLLANYMADFYASSKVTCYKTMLPPALR---PSSKHSKIIY---EDYAVLKESN 120 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATL-EFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 + +Q++ L + +++ L + + + + L +KG + D T+ Sbjct: 121 ETLTSRQKEVLEMFS----YPCKMSELRKVSPSITKVLLEKGYIGIEKR---IKDSNTHV 173 Query: 191 AVSGERLR-LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL 249 + + + L EQ A+ I S S LL GVTGSGKTEV+L + ENVL+ GKQ L Sbjct: 174 SEIADVMHSLTIEQKNAISKITSTEKMVS--LLHGVTGSGKTEVFLRLAENVLSCGKQVL 231 Query: 250 VMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 +VPEIGLTP I R + RF + + HSGLN E+L + K+ + IV+GTRSA F Sbjct: 232 FLVPEIGLTPMMIQRVQARFKQKIAIYHSGLNAQEKLEQYNLVKDHKVDIVVGTRSACFM 291 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 PF +LG+I++DEEHDSSYKQ RYH RD+ ++RA + +IL SATP+LE+ + Sbjct: 292 PFSSLGLILMDEEHDSSYKQDNTPRYHTRDIVLFRASYHKCKVILASATPSLESYARAYK 351 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRG 429 Y L+ L R + P I ++D+K +++ GL+ L+ + + L QVIL LNRRG Sbjct: 352 NVYELIELKNRI-HEMPEIC-LVDMKKERITNGLSETLLQAIHKRLSKKEQVILLLNRRG 409 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGL 489 + P + C DCG + CP C T H+ Q+ L CH C Q +CPSC S + G+ Sbjct: 410 YLPVVRCSDCGHVRICPDCGVALTYHKNQNALVCHCCGRQFKFMEECPSCHSKNYFKAGM 469 Query: 490 GTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFP 549 GTE+LE+ + +F + R+D D+T +K A E+ L E G +LIGTQM+AKG F Sbjct: 470 GTERLEEQIVEIFKDHHVVRMDADSTRKKNAHEKLLQEFEESGD-LLIGTQMVAKGLDFE 528 Query: 550 DVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL 609 VTLV +L+ D L D+R++E ++ Q +GR+GR +GEV++QT P+H ++Q + Sbjct: 529 RVTLVGILNADATLCRNDYRASETAYEMLEQASGRSGRGKLKGEVMIQTFDPDHFVMQCV 588 Query: 610 LYKGYDAFAEQALAERRMMQLPPWT 634 Y F Q + R + PP+ Sbjct: 589 KMHDYKRFFNQEMQYRHLGMYPPYV 613 >UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GYC2_SORC5 Length = 807 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/545 (39%), Positives = 316/545 (57%), Gaps = 35/545 (6%) Query: 218 SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLH 277 SA+LL GVTGSGKTEVYL +++ L +G+ ALVMVPEI LTPQ +ARFR RF + VLH Sbjct: 263 SAFLLFGVTGSGKTEVYLRAIKSCLDRGRGALVMVPEIALTPQLVARFRARFGDELAVLH 322 Query: 278 SGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHA 337 SGL+D++R + W G+ + IG RSALF P +LG+I++DEEHD S+KQ+EG RYHA Sbjct: 323 SGLSDADRHAMWASLHGGKVRVAIGARSALFAPVPDLGLILVDEEHDGSFKQEEGVRYHA 382 Query: 338 RDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ 397 RD+A+ RAH +LGSATP++E++ V++ K LRL RA + ++ V + + Sbjct: 383 RDMALLRAHRAGAVCVLGSATPSIESVALVRRGKLAELRLPDRA-HREASLPEVSLVDLR 441 Query: 398 KVQAG------LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + +AG ++ L + + L A Q ILFLNRRGFAP+++C CG + C C Sbjct: 442 RFRAGPSGDPLISLPLHRALEKTLAAKEQAILFLNRRGFAPSVVCGSCGTLTTCDACSVA 501 Query: 452 YTLHQAQH-------------------------HLRCHHCDSQRPVPRQCPSCGSTHLVP 486 T H+ + LRCH+CD P+P +C +CG+ +L+ Sbjct: 502 LTYHRGRRRDARPPSPGGAPAPAAPLDERPEGGRLRCHYCDYAGPLPDRCGACGARNLLL 561 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 GLGTE+LE T+A FP ++R+DRD + + + LA++ G IL+GTQM+ KGH Sbjct: 562 EGLGTERLEATIAGSFPEARVARLDRDVAGKDRS-QAILAKMREGKIDILVGTQMVTKGH 620 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 P+VTLV +++ D AL DFR+AER QL QVAGRAGR + G V++QT +PEHP + Sbjct: 621 DLPNVTLVGVVNADAALGLPDFRAAERGFQLLVQVAGRAGRRDRPGRVLIQTRNPEHPAI 680 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL- 665 F E+ + +R + PP T ++R + + +L + P Sbjct: 681 AFAAAHDVPGFLEREIRDREEVGYPPATRLALLRIDAVDESVGRGAAAKLAAHARTCPEG 740 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 A ++ VLGP A + GR+R+++LL+ R L+ + LI D R + ++ Sbjct: 741 ASRRVEVLGPSAAPIARLRGRYRFRVLLRARDRGPLRGALAALAGLIRDGLD-RNARVII 799 Query: 726 DVDPI 730 DVDP+ Sbjct: 800 DVDPV 804 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%) Query: 1 MPV-AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASE-LP 56 MP+ A VA+PVPL + F Y +P + V+ G RV F +++ +G+V++VS+ S + Sbjct: 1 MPLLADVAVPVPLSQAFTYEVPAALAGEVRPGARVLCEFHRRK-LLGVVLAVSERSAAID 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ 106 +++K + ++D+ P + L A YY PIG+VL ALP + R+ Sbjct: 60 PSKIKPLAALVDARPALPAELLAFLQELAAYYFAPIGEVLRLALPAIERE 109 >UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacteria RepID=A5V2S3_SPHWW Length = 734 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 256/744 (34%), Positives = 379/744 (50%), Gaps = 41/744 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIV---VSVSDASELPL 57 M AHV L P DY V+ G V P G +Q +G+V ++ A ++ Sbjct: 13 MARAHVLLLNPALGPLDYRADREHVVEPGSIVLAPLGPRQ-MVGVVWEEETLPSADQVGD 71 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N L+ +++V D P + RL+ W +DYY P VL ALP +++ + Sbjct: 72 NRLRPLLDVYDVPP-LAAPLRRLIEWTSDYYLAPPAAVLRMALP---------SSSALDG 121 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCD 175 + +A + +P+++QAL + RQG I R+ + ++ ++ L K G + Sbjct: 122 ARTIVEYRATGERPGRMTPQREQALDRIGQRQGLI-RELATIADVSEGVIRGLVKSGAIE 180 Query: 176 ---LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGK 230 ++ +TP + + AV L+ EQ A G + A A F +LL GVTGSGK Sbjct: 181 AVTVSIDTPWDAPDPDHKAVE-----LSDEQQLAAGMLAEAVAAKRFQPFLLDGVTGSGK 235 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY + L G+Q LV++PEI LT + RF RF HS L S+R AW Sbjct: 236 TEVYFEAVAEALRAGRQTLVLLPEIALTEPFLKRFEARFGHLPVAWHSELRQSQRRRAWR 295 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +GEA +V+G RSALF P+++LG+I++DE H++S+KQ++G YHARD+AV RA E+I Sbjct: 296 GIVHGEAKVVVGARSALFLPYRDLGLIIVDEAHETSFKQEDGVLYHARDVAVMRAKLEEI 355 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALI 408 PI+L SATPA+ET +Y L+LT R G A +DL G +AP L+ Sbjct: 356 PIVLASATPAIETRQQATIGRYTELKLTARHGAAEMPEIEAIDLLADPPPRGRWIAPTLV 415 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + L+ Q +LFLNRRG+AP LC CG +CP C + H+ L+CHHC Sbjct: 416 RALADRLEKKEQSLLFLNRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLLGRLQCHHCGH 475 Query: 469 QRPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 P +CP C LV G G E++ +A LFP ++ DT S + + Sbjct: 476 SMAPPAECPECKDEDSLVACGPGVERIADEVAALFPDARVAIATSDTLSTPARAAEFVER 535 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + G +++GTQ++ KG+HFP++TLV ++D D L D R+AER Q QVAGRAGR Sbjct: 536 MEAGDIDVVVGTQLVTKGYHFPELTLVGVIDADLGLSGGDLRAAERSFQQIAQVAGRAGR 595 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH--VIVRAEDHN 645 K G V +QTH P+ P++Q LL +F R++ + PP+ + +I+ AE Sbjct: 596 GAKPGHVYIQTHAPKAPVIQALLSGDAQSFYTAETEARKIAEAPPFGRYAAIIISAEKLE 655 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 LI + A + + V GP PA GR R ++L+ + +Q +I Sbjct: 656 EA------ATTARLIGRTAPAIDGMHVYGPAPAPLAMLRGRHRQRLLVHARRSLDVQQVI 709 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L + R V+ +DVDP Sbjct: 710 RDWLGPLQW---PRGVRVAVDVDP 730 >UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT54_CHLT3 Length = 829 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 229/612 (37%), Positives = 327/612 (53%), Gaps = 21/612 (3%) Query: 128 DLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS-DW 186 DL K+ + + + A Q + ++++++ + L AL ++G+ LA E + S + Sbjct: 223 DLQRAKKQAEVFERILAFEQKRFFKEELSA---SGQILDALCQRGI--LAKEKVDVSAQY 277 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 R+ + + + L Q I +A A F +LL GVTGSGKT +Y+ + L Sbjct: 278 RSVFRETSAKKPLTAAQEPVYEKIRAALQAAAFRTFLLHGVTGSGKTRIYIEAIRETLGA 337 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 GK ALV+VPEI LTPQ ARF+ F + VLHS +N SE+ AW K G+A + +G R Sbjct: 338 GKSALVLVPEISLTPQIAARFQAFFGDNLRVLHSAMNGSEKFEAWESLKTGKARVALGPR 397 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQ-QEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 SA+F P +NLG++++DEEH+SSYKQ + RYHARD A+ RA E +LGSATP+ E+ Sbjct: 398 SAVFAPLENLGLVIVDEEHESSYKQFDKPPRYHARDTAIMRAKLEGAVCVLGSATPSFES 457 Query: 364 LCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 N KY LL L+ RA G P I+ V K K L+ L + + + Q I Sbjct: 458 YYNALSGKYELLTLSERADGAVAPEIKLVHFPKSAKKSQNLSQPLFEEIEKRHASGEQSI 517 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LFLNRRGFA ++ C CG+IA C C H + HLRCH+C CP CG+ Sbjct: 518 LFLNRRGFAGSVRCEKCGFIAMCSDCHVPLVYHFQKAHLRCHYCGKVADTLHTCPKCGAK 577 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L GTE++E L LFP ISR+D DTT+ K + L + G +IL+GTQM+ Sbjct: 578 DLTLKSSGTERIEIELGQLFPPDDISRMDLDTTAGKDKHAEILKDFQTGKTKILLGTQMV 637 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKG FP+VTLV +++ D L DFR++ER L QVAGRAGR KQGEV +Q + E Sbjct: 638 AKGLDFPNVTLVGVINADIGLTLPDFRASERLFALLLQVAGRAGRGKKQGEVFMQVFNLE 697 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHNN--QHAPLFLQQLRN 658 + + + Y+ F + R+ + PP++ + + E+ N A F + Sbjct: 698 SEVFRFVAKGDYEIFYNYEIESRKELFYPPFSRLAKIEFSGEEENEVASAAADFAK---- 753 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII--NGTLALINTIP 716 IL L E +LGP PA+ K GR+R QIL++ + + N Sbjct: 754 -ILIRDLDPESFDILGPAPAVMAKLKGRYRHQILIKQKGTTLISKKLFRKMQFEFRNESK 812 Query: 717 DSRKVKWVLDVD 728 + KV+ +DVD Sbjct: 813 FAAKVRLDIDVD 824 >UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacterium RepID=A5TU64_FUSNP Length = 766 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 200/575 (34%), Positives = 326/575 (56%), Gaps = 27/575 (4%) Query: 165 LQALRKKGLCDLASETPEFSDWRTNY--AVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 ++ L +K + + + E D+ ++ VS + LN +Q I + + +LL Sbjct: 207 IKELEEKEILKIEASISEKKDYSSDNIEKVSKNKSLLNEKQLAIKENIEKSIKKY--FLL 264 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKTE+Y+ +++ +G ++ +VPEI LTPQ + RF+ F + +LHS LND Sbjct: 265 KGVTGSGKTEIYIELIKKAFFEGYGSIFLVPEISLTPQMVERFQSEFKNNIAILHSSLND 324 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 ER W G+ IV+G RSA+F+P KNL I++DEEH+++YKQ RY+A+ +A+ Sbjct: 325 IERAKEWESIYTGKKKIVLGVRSAIFSPVKNLKYIILDEEHEATYKQDSSPRYNAKYVAI 384 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLKGQKVQA 401 R E +ILGSATP++E+ + Y LL L R GNA+ P IQ V+D+K Q+ Sbjct: 385 KRCLDEDAKLILGSATPSIESYYYAKTGIYELLSLEDRYGNAQMPDIQ-VVDMK-QEDDL 442 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + AL+ ++ L + QVIL LNR+G++ + C DCG++ EC C + +++ + Sbjct: 443 FFSKALLEEIKNTLLKNEQVILLLNRKGYSTYIQCKDCGYVEECDNCSIKMSYYKSTNKY 502 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 +C++C Q +C CGST+L+ G G E++E+ L F VP+ ++D + + K Sbjct: 503 KCNYCGKQIYYTGKCTKCGSTNLIHSGKGIERIEEELKKYFD-VPMIKVDSELSRNKDYF 561 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + + ILIGTQ++AKG HFP+VTLV +++ D L DFRS E+ QL TQV Sbjct: 562 SKIYKDFSDKKYSILIGTQIIAKGLHFPNVTLVGVINSDIILNFPDFRSGEKTFQLLTQV 621 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIV 639 +GRAGR K+G+V++QT+ PE+ +++ + YD F E+ ++ R++ PP++ ++ Sbjct: 622 SGRAGRGDKKGKVIIQTYEPENNVIKDSKEENYDLFYEKEISSRKVFSYPPFSKILNIGF 681 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLAD----EKLWVLGPVPALAPKRGGRWRWQILLQH 695 +ED + R L +S D E + + GP+P++ K R+R I + Sbjct: 682 SSED-----------EARLLDISKKFYDEIKSENIELYGPMPSMVYKVQKRFRMNIFAK- 729 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 S+ ++ +N D+ KV+ V+D+DPI Sbjct: 730 GSKKKIDKFKLFLKRKLNEFNDT-KVRIVVDIDPI 763 >UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID=C7NDX7_LEPBD Length = 760 Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust. Identities = 219/760 (28%), Positives = 386/760 (50%), Gaps = 60/760 (7%) Query: 15 TFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 T+ Y E + C V ++++GI++++ + +++ ++ V ++ D+ PV + Sbjct: 14 TYTYKSEEKYEIGQWCIVNFI---NKDKMGIIIAIVNENQIQF-DISKVKKIKDAAPVLS 69 Query: 75 --HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSL 132 + +L+ W +YY V+ P L+ + ++ +E + +++ + Sbjct: 70 IPSDIMQLIRWIKNYYISDYYSVIKAVYPGALKLN--YSKKAIFQREFSENNETLEVEKI 127 Query: 133 KRSPK------QQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 + K ++Q + + K + ++ N+ + ++ KK + L S+ + Sbjct: 128 EEIKKFNEYMKKRQEVTVVTLKKNFSSEIVERAVNEKVI-SIEKKVI--LNSKISKREKG 184 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK 246 ++ + + + LN EQ AV I ++ + +LL G+TGSGKTE+Y+++++ L QG Sbjct: 185 KS--EIVEKEIILNDEQQKAVDTIKNSENQI--FLLKGITGSGKTEIYINLIKEALKQGF 240 Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 ++ +VPEI LT Q I R E F+ V +LHS L D E+ W +NGE IVIG RSA Sbjct: 241 GSIFLVPEISLTVQMIQRLEEEFHNEVAILHSKLTDKEKREEWTFIRNGEKKIVIGARSA 300 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA--------------------- 345 +F P +NL I++DEEH+++YKQ+ RYH +++A+ RA Sbjct: 301 VFAPVQNLKYIIVDEEHENTYKQENNPRYHVKNVAIKRAFLQNENLKKDEKLEKNSELEK 360 Query: 346 ----------HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 SE+I +ILGSATP+ ET QQ L+ LT+R NA+ ++DL Sbjct: 361 NDNLEEAEIVKSEKIKVILGSATPSFETYYQAQQGDIELIELTKRYKNAKLPKFEIVDL- 419 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + + L+ ++ Q LQ + QVIL LNR+ F+ L C DCG I CP C + Sbjct: 420 -NETTENFSEELLDKISQTLQKNEQVILILNRKAFSNLLKCKDCGNIPTCPNCSISLNYY 478 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 + + L+CH+C ++ C CG + +G GTE++E+ LA FP I R+D ++ Sbjct: 479 KYDNRLKCHYCGYEKRFDNTCDECGGHKMRQIGAGTEKIEEELAIAFPSAKIVRVDSESI 538 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 K E+ + I++GTQ++AKG HF +VTLV +++ D L DFR++E+ Sbjct: 539 KTKQNYEKAYNDFKNHKYDIMLGTQIIAKGLHFSNVTLVGVINADIILNFPDFRASEKTF 598 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL TQ +GRAGR K GEV++QT + E+ +++ + Y+ + + + R+M+ PP+ Sbjct: 599 QLLTQASGRAGRGEKDGEVIIQTFNGENDVIKKTIESDYEGYYKNEMIMRKMLNYPPFGR 658 Query: 636 HVI--VRAEDHN--NQHAPLFLQQL-RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 +I + A + N + A + +++ RN+ + L ++ + K GR+R+Q Sbjct: 659 IIILVISATEENLVMEKAKILREEITRNVNATMNLTSND-FISDAFKSPIYKINGRYRYQ 717 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 I + L+ + +KV+ +DVDP+ Sbjct: 718 IFFKFERENILKIKKIIKKCVGKFREREKKVRITIDVDPV 757 >UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD9_LIBAP Length = 731 Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust. Identities = 237/721 (32%), Positives = 371/721 (51%), Gaps = 28/721 (3%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQERIGIV-VSVSDASELPLNELKAVVEVLDSEPVFT 74 + Y +P M V+ G VRVP + + +GIV + + ++ +L+ + V D P+ + Sbjct: 28 YIYSVPSAMKVELGSIVRVPL-RSRTVLGIVWYNSEEKYKIDSLKLRPIEYVFDCPPL-S 85 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 + + W ADY P+G V R +A E+ Q + Sbjct: 86 RQMCEFVKWVADYTFSPMGLV-----------ARMVVSALSETEKMEEKIQFTGIFPRIN 134 Query: 135 SPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAV 192 + + + L ++ GKIW RD + + + + L+ +G+ E N Sbjct: 135 TVARLRVLDKIKDGKIWEKRDLIRASQVSSHVIDGLKAQGVIKQIFEVISPVVDSPNLYF 194 Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 S L N +Q + F+ L++GVTGSGKTEVYL ++ VL GKQ L+++ Sbjct: 195 SLPILDKN-QQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAVLHLGKQVLILL 253 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LT + RF++RF HS L+ S R W + G ++++G RSALF PFK Sbjct: 254 PEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIVGVRSALFLPFK 313 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 LG+IVIDEEHD SYKQ+EG Y+ARD+++ R E P++L SATP++E+ N ++Y Sbjct: 314 KLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLVSATPSIESRVNGISRRY 373 Query: 373 RLLRLTRRAGN-ARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADNQVILFLNRRG 429 + L+ R N A P +Q V+D++GQ + G L+P +I +R L + Q +LFLNRRG Sbjct: 374 HSVHLSTRYRNSALPHLQ-VIDMRGQTIAQGKSLSPEMIDGIRHTLARNEQTLLFLNRRG 432 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST-HLVPVG 488 +AP LC CG +C C + H+++ L CH C + C CGS+ ++ G Sbjct: 433 YAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVCGSSGKMIACG 492 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 G E++ + + FP IS + D G L+ QL+ + +G I+IGTQ++AKGH+F Sbjct: 493 FGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIGTQLVAKGHNF 552 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P ++LV ++D D L +AD RS+ER QL +QV GRAGR G + ++Q + P HP++Q Sbjct: 553 PRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQAYQPTHPVMQA 612 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 L+ D+F E + R + LPP+ V Q + L+ +P + + Sbjct: 613 LVSGDADSFYESEIRARESVNLPPFGRLAAVIISGTKYQEVENYAYNLKE---HAPRSSD 669 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + V GP + GR+R+++L+ LQ + NTI S ++ D+D Sbjct: 670 -IVVFGPAESPLFMVRGRYRFRLLIHGKRNSNLQGFFSQMYD--NTIKRSNALRVQFDID 726 Query: 729 P 729 P Sbjct: 727 P 727 >UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYZ4_SALRD Length = 825 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 224/512 (43%), Positives = 294/512 (57%), Gaps = 29/512 (5%) Query: 203 QATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 Q A+ A+ A D + +LL G+TGSGKTEVY+ L+ V A+G+ +++VPEI LTPQ Sbjct: 284 QQDALDAVTDAVDAHRYGTFLLHGITGSGKTEVYIRALQAVRARGRTGIILVPEIALTPQ 343 Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 T+ RFR F + VLHS +N ER AW + + GEAAI IG RSA+ P ++LG+IV+D Sbjct: 344 TVQRFRAHFGDEIAVLHSQMNMGERYDAWRRLRTGEAAIAIGPRSAVLAPLEDLGLIVVD 403 Query: 321 EEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTR 379 EEH++SYKQ + RYHARD+AV RAH ILGSATP+LE+ N + KY L L Sbjct: 404 EEHEASYKQFDPAPRYHARDVAVMRAHRADAVCILGSATPSLESTMNARWGKYERLELPE 463 Query: 380 RAGNAR------PAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRG 429 R +A P ++ VLDL K ++ LA L +R + Q IL NRRG Sbjct: 464 RVPDASGKTAALPDVR-VLDLALQRKKHQLDGALADPLREAIRTRVDRGEQTILLQNRRG 522 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQ--AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPV 487 +AP L C DCGW EC C TLH+ LRCH+C VPRQCP CG + + Sbjct: 523 YAPVLECEDCGWAPECQSCSVSLTLHRHDGGEQLRCHYCGYAARVPRQCPECGGRDIHQI 582 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 G GT+++E L + P I R+DRDTT K L GA IL+GTQM+AKG Sbjct: 583 GTGTQRVEAELEEVVPDATILRMDRDTTREKHG-HHDLLRRFENGADILLGTQMIAKGLD 641 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK-QGEVVLQTHHPEHPLL 606 F VTLV ++D D L DFR+ ER QL TQVAGRAGR + GEV+LQT +P+H L Sbjct: 642 FSRVTLVGVVDADVGLLFPDFRAEERTFQLLTQVAGRAGRTRELAGEVILQTRNPDHMAL 701 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR----AEDHNNQHAPLFLQQLRNLILS 662 + Y+ FAE+ALAERR + PP+ V ED + A + +QLR + Sbjct: 702 RYAQEHDYEGFAEEALAERRELGYPPFGHVATVEFRGPDEDRVERLAENWTEQLRQ--HA 759 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 P V+GP PA + + R++ LL+ Sbjct: 760 GPAG-----VMGPEPAFIQRVKKQHRYRTLLK 786 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 3/99 (3%) Query: 5 HVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +V LP+PL + + Y +PE + +AG RV VPF + + GI+V A+E ++KA Sbjct: 4 NVVLPLPLDQAYTYRVPEALVGAAQAGARVLVPF-RNRRLTGIIVGEGPAAETLDFDVKA 62 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 V++VLD PV T + L W ADYY P G+ L LP Sbjct: 63 VLDVLDDVPVCTEGLLDLTKWIADYYVCPWGEALKAVLP 101 >UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1V8_9DELT Length = 856 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 231/605 (38%), Positives = 327/605 (54%), Gaps = 33/605 (5%) Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 LKR P +AL +G + R+Q++T E ++ D E P F Sbjct: 274 LKRYPGAGRAL----KGLLARNQISTFE----------QRRYRDPFGEAPPFFPRPE--- 316 Query: 192 VSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL 249 RL EQ+ + + A + ++ +LL G+TGSGKTE+YL E LA G+Q L Sbjct: 317 ------RLTDEQSAVMARLTPAIEGRQYTPFLLHGITGSGKTEIYLRAAEAALAAGRQVL 370 Query: 250 VMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 V+VPEI L Q F RF V +LHSGL+ +R W +GEA I IG RSA+F Sbjct: 371 VLVPEIALATQLEGHFCSRFGNAVALLHSGLSGGQRYDQWSLLLSGEAQIAIGARSAIFA 430 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 P + G+I++DEEHD +YKQ++G RY+ARDLA+ R +Q ++LGSATPA+ + +Q Sbjct: 431 PLADPGLIIVDEEHDPAYKQEDGLRYNARDLALLRGVKQQATVLLGSATPAVSSYHAARQ 490 Query: 370 KKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGL----APALITRMRQHLQADNQVILF 424 K+ LL++TRR + PA++ ++DLK + +GL +P LI +R++L A Q ++F Sbjct: 491 GKFELLQMTRRVEDRPLPAVE-IVDLKAVRTVSGLPPLFSPQLIRALRENLAAGQQSLVF 549 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRGFA +LC DCG +C C T H+ L CHHC ++P C C S L Sbjct: 550 LNRRGFANLVLCKDCGRPVQCRHCQVTLTYHKKADLLLCHHCGYRQPRASLCGHCHSGTL 609 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 VP G GTE+LE+ L FP ++R+D+DT+ + + L V ILIGTQM+ K Sbjct: 610 VPAGFGTERLEEELRRHFPAARLARLDQDTSRDRKEFLKVLKAVRDHEVDILIGTQMITK 669 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 GHHFP VTLV ++ D L D+++AER QL TQV GRAGR + G V++QT EH Sbjct: 670 GHHFPRVTLVGIVWADAGLGIPDYKAAERTFQLLTQVTGRAGRGEQPGRVLVQTLQSEHY 729 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 + Y EQ +A R+ + PPW + +R + + +L + Sbjct: 730 SIALARAHDYQGLYEQEIALRQRLGFPPWGRLINLRFDGEKEEKVRELALRLGEIARGR- 788 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 AD + VLGP PA + R+RWQ+LL+ L + L + + VK Sbjct: 789 -ADSGIKVLGPAPAPLSRLKDRFRWQLLLKGRGVAPLHRLCQALLGEYARLAGASTVKLS 847 Query: 725 LDVDP 729 LDVDP Sbjct: 848 LDVDP 852 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%) Query: 5 HVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASEL-------- 55 VA+ P+ +T Y P G+ + G R+ VP G++Q ++ + L Sbjct: 10 EVAVAAPIHQTLTYAPPAGVAQLPPGHRLLVPLGRRQVTGYLLDCAAQPPALKDGGNDRQ 69 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 P +++A +EVLD EP+F ++ W ADYYHHPIG+V+ +ALP Sbjct: 70 PGGKIRAALEVLDDEPLFPAAMVPFFRWIADYYHHPIGEVIQNALP 115 >UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNV0_9FIRM Length = 706 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 228/709 (32%), Positives = 381/709 (53%), Gaps = 15/709 (2%) Query: 32 VRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHH 90 V VPFGK + G V ++S + ++++K + ++ S + L W Y Sbjct: 3 VVVPFGKGNRKTKGYVTALSKTCDYDISKVKEIADISRSGVEIEAKLIALAAWMKSNYGG 62 Query: 91 PIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQ-QALAALRQGK 149 + L LPI ++ + E G+ L+++ K + + +AAL Sbjct: 63 TMLQSLKTVLPIKEKEN-IKVKKRLRLLIDRETGEKQLHYYLEKNQKARARLMAALLDDP 121 Query: 150 IWRDQVATLEFNDAA--LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAV 207 + ++ + N A ++AL ++ + + SE + + + + + EQ A+ Sbjct: 122 LLDYELVRKKLNITATVIRALEEQHVLAVESEQV-YRNPVHAENIQKKEIIYTQEQKRAI 180 Query: 208 GAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARF 265 + +LL GVTGSGKTEVY+ ++++V+ +GKQA+V++PEI LT QT+ RF Sbjct: 181 MRFCKDYENGIRKTYLLHGVTGSGKTEVYMEMIQSVVDKGKQAIVLIPEIALTYQTVMRF 240 Query: 266 RERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 RF V V++S L+ ER ++AK GE ++IG RSALFTPF NLG+IVIDEEH+ Sbjct: 241 YRRFKDRVSVMNSRLSAGERYDQMMRAKAGEVDVMIGPRSALFTPFPNLGLIVIDEEHEP 300 Query: 326 SYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR 385 +YK ++ RYHAR+ A+ RA +E ++LGSATP++E + + +Y L+ + R+ Sbjct: 301 TYKSEQTPRYHARETALRRAQTEGASVVLGSATPSMEAMYRAKNGEYVLMEMKNRSKMQD 360 Query: 386 PAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 PA + +D++ ++++ G L+ L M++ L+ Q +LFLNRRG++ + C +CG Sbjct: 361 PAEVYTVDMR-KELKNGNRSILSEQLQRLMKERLEKKEQTMLFLNRRGYSGFVSCRECGH 419 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 + +CP CD ++H+ +RCH+C ++ + CP CGS H+ GT+Q+E+ + + Sbjct: 420 VIKCPHCDVSLSVHR-DGKMRCHYCGYEQTHVKICPECGSDHIGEFRAGTQQIEEIVKTV 478 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 FP + R+D DTT +K + E+ L+ A +L+GTQM+ KGH FP+VTLV +L D Sbjct: 479 FPQARVLRMDMDTTRQKDSHEKILSAFANEEADVLVGTQMIVKGHDFPNVTLVGILAADM 538 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 +L++ D+RS ER QL TQ GRAGR K+GE V+QT+ P+H + T + Y+AF E+ Sbjct: 539 SLYTDDYRSGERTFQLLTQAVGRAGRGDKKGEAVIQTYSPDHYAIATSAAQDYEAFYEEE 598 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAP 681 + R MM PP + + V + + L+ ++ + D + V+GP Sbjct: 599 IRYRTMMGYPPAENLLAVFISSADEALLETGCRYLKEYMIKAK-KDIEASVIGPASPGIE 657 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 K +R I ++ L + + T I K++ D +P+ Sbjct: 658 KINDVYRKVIYVKTADYHDLVVLKDRTEKYIEINSGFDKMRIQFDFNPM 706 >UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae RepID=C3WCB2_FUSMR Length = 769 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 184/533 (34%), Positives = 305/533 (57%), Gaps = 12/533 (2%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 LN EQ A I S + +LL GVTGSGKTEVY+S++++ +GK ++ +VPEI LT Sbjct: 245 LNEEQKKARETIISGIE--KNYLLKGVTGSGKTEVYISIIKSAFNKGKGSIFLVPEISLT 302 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 PQ I RF+ F + +LHS L SER W G+ IV+G RSA+F P +NLG I Sbjct: 303 PQMINRFKGEFKENIAILHSKLTASERAKEWYNIYIGKKKIVLGVRSAIFAPVENLGYIF 362 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLT 378 +DEEH+++YKQ RY+A+ +A+ RA E +ILGSATP++ET Q+ ++L+ L Sbjct: 363 LDEEHETTYKQDNNPRYNAKQVAIKRAELEGAKLILGSATPSIETYYFSQKNLFKLVELK 422 Query: 379 RRAGNA-RPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 R NA P I+ ++D+KG++ + L+ +R+ L QV+L LNR+G++ + C Sbjct: 423 NRYNNALLPEIE-IVDMKGEE-SIYFSKRLLEEIRKTLLKGEQVLLLLNRKGYSTYIQCK 480 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 DCG++ EC C Y+ + +Q L+C++C + C CGS++L+ G G E++E+ Sbjct: 481 DCGYVEECSHCSIKYSYYASQGVLKCNYCGRVKKYTGHCSKCGSSNLIHSGKGVERVEEE 540 Query: 498 LAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALL 557 + F V + R+D + + + E+ + I++GTQ+++KG HFP+VTLV ++ Sbjct: 541 IKKYFD-VRVIRVDSEMSKDREFFEKMYFDFLEKKYDIMVGTQLISKGLHFPNVTLVGVV 599 Query: 558 DVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAF 617 + D L DFR+ E+ QL TQVAGRAGR K+G V++QT+ EHP+ + + Y+ F Sbjct: 600 NADTILNFPDFRAGEKTFQLVTQVAGRAGRGDKKGRVIVQTYQSEHPVFKRVKESDYEGF 659 Query: 618 AEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVP 677 + + R +++ PP++ + + ++ F+Q + + + + GP+ Sbjct: 660 YSEEIGNRELLEYPPFSKTINIGISSKYEKYLENFVQD-----FYRDIKYDGVELYGPMR 714 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++ K R+R+ I ++ + + + I + K++ V+D+DPI Sbjct: 715 SMVYKVKDRYRYNIFIKGSIK-EINNFKKKLKLKITNYEKNDKIRIVIDIDPI 766 >UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepID=Q2JJJ7_SYNJB Length = 801 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 230/550 (41%), Positives = 310/550 (56%), Gaps = 28/550 (5%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 L QA AV AI A F +LL GVTGSGKTEVYL V+ VL QG+ ALV+VPEIGLT Sbjct: 259 LTAAQAQAVEAIRQALGRFQRFLLHGVTGSGKTEVYLQVIAQVLQQGRSALVLVPEIGLT 318 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 PQ + RFR R + V HSGL++ ER W + + +VIGTRSA+F P LG+IV Sbjct: 319 PQLMDRFRARLRSQVWAYHSGLSEGERYDTWRQMLSSTPQVVIGTRSAVFAPLSKLGLIV 378 Query: 319 IDEEHDSSYKQ-QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 +DEEHD S+KQ Q YHAR +A +RA P++LGSATPA+ET Q R +RL Sbjct: 379 LDEEHDDSFKQDQPQPCYHARQVAEWRAELAGCPLVLGSATPAVETYAAHLQDPQRWIRL 438 Query: 378 T---RRAGNARPAIQHVLDLKG--QKVQAGLAPALITRMRQHLQA----DNQVILFLNRR 428 R PA L+L Q++QAG L R+ Q LQ Q ILF+ RR Sbjct: 439 ALPQRIPQAGIPATLPQLELVDMRQELQAGNRSILSRRLHQALQQTLDRGEQAILFVPRR 498 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQ---HHLRCHHCDSQRPVPRQCPSCGSTHLV 485 G + +LC CG++ C CD T H A LRCH+C +++P P++CP+CGS +L Sbjct: 499 GHSTFVLCRSCGFVLTCEHCDVSLTFHLAHLGGQELRCHYCGARQPHPQRCPACGSPYLK 558 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G GT+++ + L +P + I R D D T RKG+ L + G A++L+GTQML KG Sbjct: 559 HFGTGTQKVVEVLHQHWPQLSILRYDSDATRRKGSHRDLLEQFRSGKAQVLVGTQMLTKG 618 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 P VTLV ++ DG L AD+R+ ER QL TQVAGR+GR G+ ++QT+ PEHP+ Sbjct: 619 LDIPQVTLVGVMAADGLLHQADYRAGERSFQLLTQVAGRSGRGSLPGQAIIQTYLPEHPI 678 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 L+ +L + Y+ F + L +RR PP + +++R + + ++ + P Sbjct: 679 LRAVLAQNYEGFLQAELQQRREGGYPPHRALILIRLSSTRLEALERYCHRVAERLQGIPA 738 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILL-----QHPSRVRLQHIINGTLALINTIPDSRK 720 VLGP PA + GR+RWQILL Q R +L I A I P + Sbjct: 739 E-----VLGPGPAQVERVAGRYRWQILLKQLPDQGWDRPKLAAQIQ---AAIGHPPQGIR 790 Query: 721 VKWVLDVDPI 730 V +DVDP+ Sbjct: 791 VS--IDVDPL 798 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 14/93 (15%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP-------LNELKAVVEVLD 68 F Y +PEG +AG + VPFG+Q + V++ SELP + E++AVV Sbjct: 12 FTYRVPEGSAPEAGDLLSVPFGRQ---MAGAVALGWRSELPAGVDPQSVREIEAVV---- 64 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 ++ + W LL ADYY P+ V+ LP Sbjct: 65 AKGILPKEFWPLLQRVADYYLTPLAQVVRTVLP 97 >UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=Bacteria RepID=Q6AL40_DESPS Length = 866 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 209/539 (38%), Positives = 297/539 (55%), Gaps = 10/539 (1%) Query: 199 LNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L+ EQ A I + F+ +LL G+TGSGKTEVYL E +A+G+ LV+VPEI Sbjct: 326 LSPEQEEACSEIKKTIEGEIFAPFLLYGITGSGKTEVYLRSAEEAIARGRDVLVLVPEIA 385 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 L Q A F RF V + HSGL SE+ W A +G A IVIG RSA+F P KN+G+ Sbjct: 386 LATQLEAYFVSRFGDLVVLQHSGLKASEKYDQWSLALSGRAKIVIGARSAIFAPLKNVGL 445 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD +KQ + +RY+ARDLAV RA ++LGSATP++ + + + KYRLL Sbjct: 446 ILVDEEHDGGFKQDDSFRYNARDLAVLRAKYHSATVVLGSATPSVTSFYHAKSGKYRLLT 505 Query: 377 LTRRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 + R G+ V+DL KG+K + P L T +++ L Q IL +NRRGF+ Sbjct: 506 MKNRIGSRTLPRVRVIDLNTRDKGKKKKGIFQPPLQTALKEVLAQGKQSILLMNRRGFSA 565 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 +LC DCG I C RC+ TLH+ L CH+C P C SCG ++VPVG GTE Sbjct: 566 IVLCRDCGEIVSCKRCNVSLTLHRHSKKLVCHYCGFSLPEATVCRSCGGANIVPVGFGTE 625 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E+ + L P ++R+D DT + + L ++ G +LIGTQM+AKGHHFP V Sbjct: 626 RVEEEVQKLLPEARVARLDSDTAGNREHFLKILQKMRDGQIDVLIGTQMIAKGHHFPGVV 685 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV ++ DG + DFR+AE+ QL +QV GRAGR G+V +QT P+H + Sbjct: 686 LVGVVWADGGMSLPDFRAAEKTYQLISQVTGRAGRGDSPGKVFIQTMRPDHYAIAFARNH 745 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 Y AF E ++ R+ PP+ + N + N D+KL V Sbjct: 746 DYQAFYEHEISLRQNPLFPPFVRLIAFHIRGENEGQVKNSAGNIANFCRREN-RDKKLQV 804 Query: 673 --LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 LGP PA + +RWQ+L++ +L + + + + + K+ ++DVDP Sbjct: 805 DILGPAPAPIDRIKDSYRWQVLIKGSCYEKLHTLCHRVESAGKELLLA-KITMIIDVDP 862 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 67/273 (24%), Positives = 106/273 (38%), Gaps = 56/273 (20%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA-------GCRVRVPFGKQQERIGIV------VS 48 P VAL +P+ + Y L G+ G RV VP +Q I+ V+ Sbjct: 15 PEVEVALALPVNQILTYSL-RGVDTGGRSDAHMLGMRVLVPLSGRQATAYIINILREKVA 73 Query: 49 VSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 + E ++++++ LD +F ++ W +DYYH+P+G V+ ALP L Q Sbjct: 74 CPEGREEKKYKIRSILRFLDKGALFHSNMLPFFKWISDYYHYPLGLVIKSALPGGLTQ-- 131 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQ------------GKIWRDQVA 156 + V + +P ++ LA L Q GK+ + Sbjct: 132 ----------------KTVSVIKRGEAPWDEKKLAGLIQEMPDWLQRVCQLGKLSFAESR 175 Query: 157 TL---EFNDAALQALRKKGLCDLASETPEFSDWRTN---YAVSGERLRLNTEQATAVGAI 210 +L N L L + GL + E S N Y + G L +++ QA + Sbjct: 176 SLLKESKNRTLLTKLEELGLVQIGQEQVGDSVREKNEICYHLLGLALDIDSLQAE-LSPE 234 Query: 211 HSAADTFSAWLLAGVTGS-----GKTEVYLSVL 238 S + F LL+ +TG KT YLS L Sbjct: 235 TSQIEEFRQSLLSSITGKMLFSEAKTLYYLSYL 267 >UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium hafniense RepID=B8FS82_DESHD Length = 775 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 255/774 (32%), Positives = 392/774 (50%), Gaps = 70/774 (9%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEVLDS 69 L + F Y +PEG+++K G RV VP +Q + G+VV +++ E+ + LK ++ ++D+ Sbjct: 15 LDQVFHYQIPEGLSLKRGMRVLVPLQYRQVQ-GVVVRITEQLPQEIAHSALKPILGIVDT 73 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDL 129 V + L LW A+ I L P+L +G+ Y + D+ Sbjct: 74 MYVVPEDLVDLALWLAETTICSIAQSLHTVWPLL--KGKVEE-----YVIPMASQEDEDV 126 Query: 130 NSLK-RSPKQQQALAALRQGKIWRDQVATLEFN---------DAALQALRKKGLCDLASE 179 +LK + QALA I+R + TL + ++ L K+G L S Sbjct: 127 KALKILDSETYQALAV-----IFRSRNKTLPLSTYLKRSGLSKTQVEHLAKQGWLKLESR 181 Query: 180 -------------TPEF------------------SDWRTNYAVSGERLR-LNTEQATAV 207 TPE +D N + LR L EQ Sbjct: 182 FTSGVPRKVQAALTPEERVGDDLGDRESMTGMMHEADIELNVHQGPDYLRTLTPEQGKVC 241 Query: 208 GAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARF 265 + A D ++ LL GVTGSGKTEVY ++ VL +G A+++VPEI LT Q F Sbjct: 242 EKVTQALDKQSYETLLLHGVTGSGKTEVYQRLIGEVLVKGGSAILLVPEISLTSQIARYF 301 Query: 266 RERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 +++F + VLHSGL E+ AW G+ IV+G RSA+F P +L +I++DEEH+S Sbjct: 302 QDQFGEQLIVLHSGLQVGEKAKAWQDILQGKIRIVVGARSAVFAPLPDLRLIILDEEHES 361 Query: 326 SYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR 385 +Y Q+E +YHAR++A R + ++LGSATP+LE Q K LL + R N R Sbjct: 362 AYHQEENPKYHARNVARKRMEQLRGVVLLGSATPSLEAYAAAQTGKVPLLTMEERV-NRR 420 Query: 386 PAIQ-HVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 P V+D++ + ++ + +L ++++ L+ Q +LFLNRRG++ ++C +CG+ Sbjct: 421 PLPPVEVVDMREELIKGNRSMFSLSLQDKLKRTLERGEQSMLFLNRRGYSTFVVCRECGY 480 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 + C CD T H H +RCH+C+ + PR CP CGS ++ G GT+++E + L Sbjct: 481 VIRCHDCDIALTYHTQGHTMRCHYCNHEEVPPRTCPECGSRYIRFFGQGTQRVEDEIKGL 540 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 +P I R+D DTT K A E L + R A IL+GTQM+AKG FP+VTLV ++ D Sbjct: 541 YPAARILRLDFDTTRSKDAYEDILGKFRRQEADILVGTQMMAKGLDFPNVTLVGVVAADQ 600 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 L DFR+ ER QL TQVAGRAGR+ K G+VV+QT+ PE + + F + Sbjct: 601 MLNMPDFRARERTFQLLTQVAGRAGRSQKPGQVVIQTYTPEDRAIIQASQHNFKGFFWEE 660 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPL-----FLQQLRNLILSSPLADEKLWVLGPV 676 + R+ PP+T HVI H + + + LR I+S L +LGP Sbjct: 661 IGYRKARNYPPFT-HVIRVTLIHEKEEKVIKGAHSLVNSLRQGIVSDQNGHTSLDILGPA 719 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 PA+ P+ +RWQ+ ++ L+ ++ + P S ++ ++VDP+ Sbjct: 720 PAVIPRLKNHFRWQVSVKGKLMDTLREFLHQGVRRFARDPISSGIQLNIEVDPL 773 >UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae RepID=PRIA_CHLTR Length = 753 Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust. Identities = 246/756 (32%), Positives = 386/756 (51%), Gaps = 47/756 (6%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQ----QERIGIVVSVSDASELPL 57 A V + + + DY +P + V G V+VP ++ + +I IV+ + +S+ + Sbjct: 12 AEVIVNANINKILDYGIPAELENLVTVGSVVKVPLQRKLTNDKYKIAIVLKIKSSSDF-V 70 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 + ++ ++++ + L+ W + YY P+G + LP + Q + + Sbjct: 71 HVIQPILDISYEGITLPQDLIDLIFWISQYYFCPLGSAVSLFLPTVYAQTHSTKHQNNVF 130 Query: 118 WFATEQGQAVD-LNSLKRSPKQQQALAALRQGKIWR--------DQVATLEFNDAALQAL 168 GQ + + ++ Q +A LR K+ + + + E + L AL Sbjct: 131 L-----GQNAERTQEILKTLDNPQQIAVLR--KLLKTTKPLTPPELMRKTEVSAKTLDAL 183 Query: 169 RKKGLCDLA-SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGV 225 K+ + S E D + +Y + + LN EQ AV I + A+ F LL GV Sbjct: 184 VKQKFIRIVDSADLEIQDEQLHYFLP-DPPTLNQEQLDAVNTISQSLVAEQFQTCLLFGV 242 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKTEVYL V+ A GK +++VPE+ LT QT++ F+ F + V VLH L+DSER Sbjct: 243 TGSGKTEVYLQVIRKARALGKSVILLVPEVALTIQTLSFFKMHFGSEVGVLHYKLSDSER 302 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYR 344 W KA G I+IG RSA+F P +NLG+I++DEEHDS+YKQ + Y ARD+AV R Sbjct: 303 TQTWYKASRGLINIIIGPRSAIFCPIQNLGLIIVDEEHDSAYKQSDLPPFYQARDVAVMR 362 Query: 345 AHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPA----IQHVLDLKGQKVQ 400 +ILGSATP+LE+ N KKY L L++RA + P I L+++ + + Sbjct: 363 GKMTNATVILGSATPSLESYTNALSKKYTLSVLSKRASTSTPTKVFLIDMNLEMEKTRKK 422 Query: 401 AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + +I + Q L+ Q I+F NRRGF + C C + +CP CD T H+ + Sbjct: 423 PFFSQTVIRSIEQRLEVGEQTIIFFNRRGFHTNVSCSSCKYTLKCPHCDMILTFHKTERI 482 Query: 461 LRCHHCDSQRPVP-RQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 L CH C+++ P CP C G+ L G GTE++E L FP R+D DTT + Sbjct: 483 LLCHLCNTRLSKPITSCPQCLGTMTLQYRGAGTEKIETLLREFFPTARTIRLDSDTTRFR 542 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 G+ + + + G A ILIGTQM+AKG HFP VTL +L D L+ DFR+AE+ QL Sbjct: 543 GSHDALVKQFATGKADILIGTQMIAKGMHFPAVTLSVVLSGDSGLYIPDFRAAEQVFQLI 602 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV- 637 TQV GR+GR+ GEV++QT P++ + L + + AF ++ + R++ PP+T + Sbjct: 603 TQVTGRSGRSHLPGEVLIQTFLPQNSTISHALAQDFPAFYKEEILGRKVCNYPPFTRLIR 662 Query: 638 ---IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + D+ + Q++ LI + + L + P K + +Q L++ Sbjct: 663 CIFLGKCSDYTLKET----QRVHTLIKQNLDSQASLMEISPCGHFKVK--DLFHYQFLIK 716 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + I LA S KV+ ++DVDP+ Sbjct: 717 TRNILVANKQIQEALAAAKL---SSKVRCIVDVDPV 749 >UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae RepID=B0TGS7_HELMI Length = 789 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 263/748 (35%), Positives = 390/748 (52%), Gaps = 61/748 (8%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + +P L R F Y +PE + V+ G V V F + R ++ +EL Sbjct: 9 LAQVIVDIPHRDLDRVFHYRIPETLAGEVEPGREVWVAFHGKLTRGWVLELEVATAELER 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI---------LLRQGR 108 VE ++ H + L+ W A DVL P +L + Sbjct: 69 AFALQPVEAVNGSYRLGHDLLALVPWLARETLGTKADVLRLMAPPGPPVRPAAWVLLAAK 128 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE-FNDAALQA 167 P A + +W + A L L R+P+++ A+L GK A ++ +DA L Sbjct: 129 PDREA-IAFWEGIDPECADLLRRLSRAPQRRMKYASL-TGKGGGVPPAVIDRLSDAGLVT 186 Query: 168 LRK-------KGLCDLASETPEFSDWRTNYAVSGERLR-------------LNTEQATAV 207 +R+ + + A E ++ + A + L +Q AV Sbjct: 187 VRQLLPKLAERATMERAREKAHQTETIADPAAKPASITNSSALPPLFPEPALTPDQKQAV 246 Query: 208 GAIHSAADTFS------AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 + A D +LL GVTGSGKTEVY+ + LA+G+QAL++VPEI LTPQT Sbjct: 247 HYLTEALDAAGRGGDSRPFLLHGVTGSGKTEVYICAIREALARGRQALLLVPEIALTPQT 306 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 R RERF + V +LHSGL D+ R W + GEA +V+G RSA+F P LG+I++DE Sbjct: 307 ERRLRERFGSQVALLHSGLADAARRQEWQRIYRGEADLVVGARSAVFAPLPRLGLIIVDE 366 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR- 380 EH+ SY+Q +YHAR+ A+ RA ++ GSATPALET +++LL+L +R Sbjct: 367 EHEPSYRQDNDLKYHARETAMERARHCGAVVVFGSATPALETYAQALSGRFQLLKLRQRP 426 Query: 381 AGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 AG P + V+D++ ++ AG L+ L+ + + LQ QVIL+LNRRGF+ ++C Sbjct: 427 AGGQLPPVD-VIDMR-DELAAGNKGMLSRYLLKAVEERLQRRQQVILYLNRRGFSTFVIC 484 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 +CG + CP C H+ L CH+C+ ++ VP +CP C S + G GT+++E+ Sbjct: 485 RECGTVVTCPHCSISLVYHRHGEQLHCHYCNFRQDVPERCPHCRSRAIRYFGTGTQRIEE 544 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L FPGVP+ R+DRD +++G + L RG A IL+GTQM+AKG FP VTLV + Sbjct: 545 ELRARFPGVPVLRMDRDVAAQEG-IAPVLDAFGRGEAPILVGTQMIAKGLDFPRVTLVGV 603 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 L D +L +DFR+AER QL +QVAGRAGRA + G+VVLQT+ PEH LQ + Y+ Sbjct: 604 LAADASLHISDFRAAERTFQLLSQVAGRAGRAREPGQVVLQTYCPEHYCLQAVQLHDYEG 663 Query: 617 FAEQALAERRMMQLPPWT--SHVIVRAEDH------NNQHAPLFLQQLR--NLILSSPLA 666 F + + R+ + PP+ + V+ + + A + QQ + LSS LA Sbjct: 664 FFRREIELRQQLGYPPFARLARVLFSGPEEPLVRVAADTWAEILRQQAGAVTMGLSSGLA 723 Query: 667 DEKLWVLGPVPALAPKRGGRWRWQILLQ 694 ++ V GP PA K R+RW + L+ Sbjct: 724 QPEIDVWGPAPAPVAKVENRFRWLLTLR 751 >UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTX7_PEDHD Length = 824 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 217/615 (35%), Positives = 332/615 (53%), Gaps = 26/615 (4%) Query: 132 LKRSPKQQQALAAL-----RQGKIWRDQVATLEFND---AALQALRKKGLCDLASE-TPE 182 L+R+PKQ AL +Q + + Q+ LE +D AA + L K + + Sbjct: 218 LERAPKQLNALLTFIKLSRQQNLVSKSQL--LEESDCGQAAFKTLLDKEIFTVEKRPVSR 275 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 D ++ ++ E L+ Q A+ I + LL G+T SGKT++Y+ ++E + Sbjct: 276 LKDNDEDFVLNFE---LSAAQQQALTGIEMEFERKDVVLLHGITASGKTQIYIKLIEKAI 332 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 QG Q L ++PEI LT Q + R + F + V HS N++ER+ W K NG+ +V+G Sbjct: 333 EQGGQVLFLLPEIALTTQIVQRIQRYFGDAIGVYHSKFNNNERVEIWNKVLNGKYRVVLG 392 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPAL 361 RSA+F PFK L +IV+DEEH+SSYKQQE RY ARD+AVY AH Q +LGSATP++ Sbjct: 393 ARSAVFLPFKELKLIVVDEEHESSYKQQEPSPRYQARDVAVYMAHLHQAKTVLGSATPSI 452 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMRQHLQA 417 E+ N +KY L+ L R G + V+ + K +K+ + + LI + L+ Sbjct: 453 ESYYNAISQKYGLVTLNERFGGVELPLHEVVSISEETKKKKMVSYFSGKLIEGISLALEQ 512 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QVILF NRRG+A L+C CG+ +C CD T H+ L CH+C + CP Sbjct: 513 KEQVILFQNRRGYATILICATCGYAPKCVNCDVSLTYHKTSGKLHCHYCGYHQSSINICP 572 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 +CGS H+ G GTE++E+ L+ +FP I+R+D D+T + L+Q +++ ILI Sbjct: 573 ACGSVHIEQKGFGTERVEEELSLVFPDAKIARLDVDSTRTRNGLQQLISDFQEKKTDILI 632 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG F +VTL+ +++ D L DFR+ ER QL QVAGRAGR KQG+V++Q Sbjct: 633 GTQMVAKGLDFDNVTLIGVINADTLLNYPDFRAFERSYQLLAQVAGRAGRRDKQGKVIIQ 692 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + H +++ ++ Y + LAER PP+T + V + H +Q Q Sbjct: 693 AYDDSHRIIRQVMENQYLEMYKDELAERLQFHYPPFTRLIFVNIK-HKDQDLLNMAAQRF 751 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL---QHPSRVRLQHIINGTLALINT 714 IL + L VLGP + + + Q+++ + S +++ ++ T+ + Sbjct: 752 ATILRAQLGPR---VLGPEQPMVARIRNYYIKQVIIKTDKDTSVQKVKSVLKNTILDFQS 808 Query: 715 IPDSRKVKWVLDVDP 729 + R V +DVDP Sbjct: 809 EKEYRSVNIQVDVDP 823 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V LP+ L + + Y +P + V G RV V FGK + ++ ++S + L + K Sbjct: 16 VEVILPLSLAKNYLYRVPFDLNSEVAIGKRVVVQFGKNKIYTALIKTISQTAP-RLYQAK 74 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +++V+D +PV T +L W YY GDV+ ALP L+ Sbjct: 75 YIIDVVDEQPVITTLQLQLWDWMTGYYLCNEGDVMSAALPTGLK 118 >UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC17_CARHZ Length = 718 Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust. Identities = 236/738 (31%), Positives = 372/738 (50%), Gaps = 40/738 (5%) Query: 4 AHVALPVP---LPRTFDYLLPEG--MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A VAL P L R + Y LP V G +V+ F + E G + S+ + Sbjct: 5 AQVALLRPSRHLDRLYTYKLPSSDIKKVAIGAKVKFNFNNRLEE-GFIFSLGQEKDFS-G 62 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 E+K ++EVL E T + ++ W ++YY I + AL ++ + + ++ Sbjct: 63 EIKPILEVLPEELWLTPELVEMVKWISEYYLCSITE----ALTLISFPEKIYQDVEVFCT 118 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATLEFNDAALQALRKKGLCDLA 177 E + KR + ++ L+ + + R + + +R+K L +L Sbjct: 119 VVDETKLKEKIKKSKRLQNDEMVISLLKDKRGLVRTTSTIKKLVKQGILQIREKPLPNLP 178 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + L Q I LL G+TGSGKTE+YL + Sbjct: 179 P------------------IELTESQKQVYQQIKRDMPKNFVGLLHGITGSGKTEIYLKL 220 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + L GKQ L ++PEIG+T Q +AR ++ F V HS L+ E+ + W + K G Sbjct: 221 AGDFLNHGKQVLFLLPEIGITTQMVARVKKYFPENTLVYHSRLSAREKFTVWRELKKGSP 280 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +V+GTRSA F PF+NLG+I++DEEH+ SYKQ+E +YH R++ +RA IP++LG+A Sbjct: 281 VLVLGTRSAAFLPFQNLGLIILDEEHELSYKQEETPKYHVREVVYWRAKRLGIPLLLGTA 340 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQ 413 TP++ET V + L +R N RP Q ++ ++ + G ++ L ++ + Sbjct: 341 TPSMETYAAVISGLIKYYFLGKRYQN-RPYPQVIIVDMFKEAKEGNTGIISSVLQKKISE 399 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 LQ QV LFLNRRGFAP ++C CG+ CP CD T H+ + + +CH+C + Sbjct: 400 RLQKGEQVFLFLNRRGFAPMIMCRKCGYFYRCPDCDVSMTYHKEEKNFQCHYCGKKIAFT 459 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 R+CP+C L G GT+++E+ L LFP I R+D DT K + ++ L + A Sbjct: 460 RKCPACQEISLDLYGYGTQRVEEELKKLFPA-KIFRVDYDTMRSKNSYDKILEAIKNKEA 518 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 I+IGTQMLAKG FPD+TLV +L+ D +L DFR+ ER L TQVAGRAGR GE Sbjct: 519 DIIIGTQMLAKGFDFPDLTLVGVLNADQSLNLPDFRAGERSFNLLTQVAGRAGRGLVPGE 578 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPL 651 V++QT +PE+ ++Q + + +A + L+ R+ PP++ +I+ ED Q Sbjct: 579 VIIQTFNPENYIIQAVQRGNFQQYALKELSLRKQTGYPPFSKIFRLIIAGEDE--QKVIE 636 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 L NL+ ++ ++ ++GP A K +R+ ILL+ + ++ L Sbjct: 637 GANNLVNLLKNASKFSPEIEIIGPAAAPFYKLKRNFRYHILLKTNKSSFAREVLKAGLQE 696 Query: 712 INTIPDSRKVKWVLDVDP 729 + K+ VLD+ P Sbjct: 697 FKKSSLNHKLTLVLDLSP 714 >UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYL3_9PROT Length = 705 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 271/735 (36%), Positives = 378/735 (51%), Gaps = 40/735 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKA-GCRVRVPFGKQQERIGIVVSVSDASELPLN- 58 M VA+ PLP F Y P A G RV+VPFGK RIG+V+ +SD LP + Sbjct: 1 MLCIEVAVFSPLPGCFSYSWPPEFGEPAVGIRVQVPFGKGT-RIGVVLRLSDT--LPDSV 57 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ELK V + LD P++ S + + YY GD AL W Sbjct: 58 ELKPVADRLDVSPLYDASRIQWVERVRRYYLASSGDAWQTAL----------------AW 101 Query: 119 FATEQGQAV---DLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 A +Q +A D+ L ++ A+ R+ + A +E A L Sbjct: 102 AAHDQVRAFRCPDVAVLAKAAPALAAVFTSRRALSLKTIAARIE-PCALRHCLNTACQAG 160 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 L E + N ++ L L QA+AV + A F +LL G TGSGKTEVYL Sbjct: 161 LLEEVLHEPLLQQNESIPAA-LTLTDAQASAVQMLVDARG-FQPFLLFGRTGSGKTEVYL 218 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 + +G + LV+VPEIGLTP IAR + RF A V V HS L + +RL+ ++ Sbjct: 219 RAASESIRRGGRVLVLVPEIGLTPMWIARLQSRF-ARVAVWHSALTERDRLA--VRQHLA 275 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + I+IGTRSALF P +L +IV+DEEHD S+KQQ+G Y ARD+AV A IPI+LG Sbjct: 276 QTDILIGTRSALFLPLPDLAMIVVDEEHDGSFKQQDGMAYSARDMAVLLAQQLDIPIVLG 335 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAGLAPALITRMRQH 414 SATP+LE+ Y+ + L R + I+ ++D++ V ++PAL+ M+Q Sbjct: 336 SATPSLESWRQALAGLYQRIDLPSRIADHTQQIKPEIIDMRA--VDGPVSPALLAAMQQT 393 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L A +Q ILFLNRRG++P+L C CG + +CP C TLH+ LRCH C R PR Sbjct: 394 LAAGDQTILFLNRRGYSPSLQCTACGDVPQCPACSLSLTLHRRAGQLRCHSCGFIRRAPR 453 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 C CG L+P+G GTE++E+ L P + SR DRD + L + LA R Sbjct: 454 SCECCGEAALMPMGEGTERIEEWLQQHIPDLRFSRFDRDVVTSHARLSEILAAFERRELD 513 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 L+GTQML KGH FP VTLV +++ D + DFR+ ER+ Q TQV GRAGR K G + Sbjct: 514 CLLGTQMLVKGHDFPHVTLVGVVNADQGMNMPDFRAGERWWQQMTQVTGRAGRGEKAGRM 573 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT P+ LQ + +A L R M+Q PP+ V V + A Sbjct: 574 LIQTRMPDAAWLQRIAEAQAEATMTAELELREMLQYPPFARWVRVVFSAMRAERA----D 629 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 Q S A +L V GP+P + GR+R+++LL+ +R Q + L ++++ Sbjct: 630 QAAAAFAESCRAISELMVSGPMPCAMERLAGRFRFEVLLRDTTR---QLLPWKLLPVLDS 686 Query: 715 IPDSRKVKWVLDVDP 729 + V+ +DVDP Sbjct: 687 LKVPSGVRRRVDVDP 701 >UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIP9_9FIRM Length = 792 Score = 371 bits (953), Expect = e-101, Method: Compositional matrix adjust. Identities = 228/606 (37%), Positives = 328/606 (54%), Gaps = 19/606 (3%) Query: 133 KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAV 192 K KQ A+ L++G ++ + A +++L K+G+ + + Sbjct: 193 KLGNKQALAVGILKKGPCALTELEKQGVSRATVRSLEKRGIIKTEETSLRRDPLAGEQFI 252 Query: 193 SGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 + L Q A+ I A + LL GVTGSGKTEVYL + + A G+ ++V Sbjct: 253 PQQSLSATVAQGEALQQIGDALAGNKPRTVLLHGVTGSGKTEVYLQAIADTAAAGRGSIV 312 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQ I RF RF V VLHS L+ ER W + GEA + IG RSA+F P Sbjct: 313 LVPEIALTPQMIERFAARFGERVAVLHSKLSAGERYDEWCRIAAGEAWVAIGARSAIFAP 372 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 F+NLG+I++DEEH+S+YKQ E RYHARD+A++RA + ++LGSATPALE+ + Sbjct: 373 FRNLGLIILDEEHESTYKQDEAPRYHARDIALWRAGNHDAAVVLGSATPALESSLQARLG 432 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLN 426 YRL L R N ++D++ Q+++ G + L+ + + + Q IL LN Sbjct: 433 NYRLCPLQERIANRPMPPVEIVDMR-QELKDGHRSIFSRPLLAALEKVFAEEKQAILLLN 491 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 RRG+A +LC +CG + C C+ H A+ LRCH+C+ Q P P CP C ++ Sbjct: 492 RRGYATFVLCRECGHVMRCTGCNVALKFHMAEEMLRCHYCEHQEPYPLTCPKCSGRYIKH 551 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G GT+++E+ L FP V ++R+D DTT+RKGA ++ L A +LIGTQM+AKG Sbjct: 552 FGTGTQKVEEELRKHFPHVRVARLDADTTTRKGAHQKILNTFKNKEAHVLIGTQMVAKGL 611 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 FPDVTLV ++ D A+ DFR+ ER QL TQVAGRAGR G VV+QT+ PEH + Sbjct: 612 DFPDVTLVGVITADTAINLPDFRAGERTFQLLTQVAGRAGRGSAGGNVVVQTYTPEHYAI 671 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHV--IVRAEDHNNQ-HAPLFLQQLRNLILSS 663 Y+AF + RR + PP+T V ++ ED A F+ + L Sbjct: 672 LAAKTHDYEAFYAEESVARRELGYPPFTRMVRLLLSGEDEARVIDAASFM-----VSLFE 726 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 AD +LGP P K G++RWQ++++H L + P + V+ Sbjct: 727 GDAD----ILGPSPCPIEKVRGQFRWQVVVRHCELEPLLAAVEDAAEKFRCSPPATAVRL 782 Query: 724 VLDVDP 729 +DVDP Sbjct: 783 SVDVDP 788 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/74 (36%), Positives = 38/74 (51%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 L R F Y +P M V+ G RV VPFG Q+ + +D+S + +K + EVLD P Sbjct: 16 LDRPFTYRVPSTMDVRVGSRVVVPFGPQRLEGFCIGLNTDSSLSETDGIKEIEEVLDEAP 75 Query: 72 VFTHSVWRLLLWAA 85 + T + L W A Sbjct: 76 LLTEELVDLSAWGA 89 >UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH07_SEBTE Length = 715 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 199/666 (29%), Positives = 357/666 (53%), Gaps = 35/666 (5%) Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 + +L+ W A YY +V+ P +L+ + ++ E + + ++K Sbjct: 72 EDIIKLMDWMAVYYISDYYNVIKTVFPGILKLN---YSQKAVFYKELENAEKYNSETIKD 128 Query: 135 ----SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 K++ +A K +D V+ + DA K L ++ + + T+ Sbjct: 129 FNDYMKKKKVVTSATLIKKFGKDLVSYAQSKDAV------KIEKHLVTKENKIKEIETDG 182 Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 ++ + LN EQ V AI + + + +L+ G+TGSGKTEVY+ +++N L G ++ Sbjct: 183 IINETDIELNEEQKNTVEAIENGNNDY--YLIKGITGSGKTEVYIRLIKNALKSGGGSIF 240 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQ + R + F+ V +LHS L ER W K+G +VIG RSA+F P Sbjct: 241 LVPEISLTPQMMDRLKREFSNNVALLHSRLTTKERKEEWNAIKSGNKKVVIGARSAVFAP 300 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS-EQIPIILGSATPALETLCNVQQ 369 +NL I++DEEH+++YKQ+ RYH +++A+ RA+ E + +ILGSATP+ +T ++ Sbjct: 301 VQNLKYIILDEEHETTYKQESNPRYHTKNVAIKRANLLENVKVILGSATPSFDTYYQAKE 360 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRG 429 LL L R +A+ + +++L Q V + L+ ++ + L + Q+IL LNR+ Sbjct: 361 GVIELLELKNRYNDAKKPVYDLVNL--QNVNGNFSHELLEKISEKLLKNEQIILILNRKA 418 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGL 489 F+ + C DCG + CP C ++ ++ L+CH+C ++ C +CGS +L+ +G Sbjct: 419 FSTFIKCRDCGTVETCPNCSISLNYYRKENKLKCHYCGYEKYFKPVCGNCGSKNLIHLGT 478 Query: 490 GTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFP 549 GTE++E L +F I RID + T + E+ + IL+GTQ++AKG HFP Sbjct: 479 GTEKIELELGEIFKDARILRIDSENTKTQEQFEKMYNDFKNHKYDILLGTQIIAKGFHFP 538 Query: 550 DVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL 609 +VTLV++++ D L DFR+ E+ QL TQ +GR+GR K+GEV++QT+ P++ ++ Sbjct: 539 NVTLVSIINADIILNFPDFRAGEKTYQLLTQASGRSGREKKEGEVLIQTYDPDNDAIKKT 598 Query: 610 LYKGYDAFAEQALAERRMMQLPPW--TSHVIVRAEDHN--NQHAPLFLQQLRNLILSSPL 665 + Y+ + E + R++++ PP+ ++++ +E + A F ++ Sbjct: 599 ISDNYEGYYENEMEIRKILKYPPYGRIINIVISSETETGLKEKAEKFYNMIK-------- 650 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT-LALINTIPDSRKVKWV 724 ++ ++ P A + R+R+QI ++ R+ + +I + +L+N + V+ Sbjct: 651 -EKNSFIPKPFKAPIYRINNRYRYQIFIK-SDRISINNIKHRIRSSLVNY--REKDVRIS 706 Query: 725 LDVDPI 730 +DVDP+ Sbjct: 707 VDVDPV 712 >UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepID=A6TRW9_ALKMQ Length = 829 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 204/578 (35%), Positives = 317/578 (54%), Gaps = 12/578 (2%) Query: 129 LNSLKRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 L LK + KQ+ L L++ +WR D + E + A + L +KG+ + + Sbjct: 211 LEGLKNAKKQKTILLLLKEQPVWRIKDLMIAGEASRATINTLIEKGMASIYEKEVRRDPL 270 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 + + N EQ + I + +LL G+TGSGKTE+YL ++E V Sbjct: 271 AQQDYAAFPKFLPNEEQKGVIDEITQLIKQERRQNYLLHGITGSGKTEIYLQLIEEVNRM 330 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 GKQ +V+VPEI LTPQTI RF+ RF + VLHS L+D ER W + ++GE VIG R Sbjct: 331 GKQGIVLVPEIVLTPQTIERFKGRFGDGIAVLHSHLSDGERFDEWRRIQSGEVNTVIGAR 390 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL 364 SA+F P +NLG+I+IDEEH+ +YK ++ +YHA ++A R E +ILGSATP++E Sbjct: 391 SAIFAPLQNLGLIIIDEEHEHTYKSEQNPKYHAVEVAKQRGVIENAIVILGSATPSVEDY 450 Query: 365 CNVQ-QKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQ 420 + ++ +L+ L +RA ++D++ + + L+ L T + ++L+ Q Sbjct: 451 SLTENEETIKLMTLNKRATQGELPPVEIVDMREELDEGNKSILSKRLHTAIEENLEKRKQ 510 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 ILFLNRRG++ + C CG++ +C CD T H A +L+CH+C PR CP C Sbjct: 511 TILFLNRRGYSTFISCRQCGYVVKCKHCDISMTYHMASGNLQCHYCGESLEPPRICPECS 570 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S+++ G GT+++E+ + F + R+D DTTSRKG+ + L +G ILIGTQ Sbjct: 571 SSYIKYFGTGTQKMEKIVQQQFSKANVERMDLDTTSRKGSHGRILERFKKGEIDILIGTQ 630 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 M+AKG FP+VTLV ++ D L DFR++E+ QL TQVAGRAGR G V+LQT+ Sbjct: 631 MIAKGLDFPNVTLVGIVSADMMLNFPDFRASEKTFQLITQVAGRAGRGLDPGVVILQTYD 690 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ----L 656 P+H + Y F E L R+ PP+ + + + ++ + Sbjct: 691 PDHYSILAASKHDYRTFYEDELMIRKAFGYPPFNKLINLNFSGVSEMQVITVTKKIVDGI 750 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + ++ D +LGP P++ K ++R+Q++L+ Sbjct: 751 KYILNKKGFIDLDEVILGPNPSVIGKINRKYRYQVILK 788 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLD 68 + + FDY +P+ + ++ G RV VPFG +++ V+ + + S LK V+E++D Sbjct: 19 IDKAFDYGIPDHLLGKIQRGMRVLVPFGNGNKKLEAYVLKIMEHSGAK-QRLKKVIELID 77 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVD 128 +P+ +L+ W Y A+ ++ +G M Q + Sbjct: 78 QKPILREEQMKLIQWIKQEYLCK----YIEAIHCIVPRGMIHREEKMVTLINDHWRQEIS 133 Query: 129 LNSLKRSPKQQQALAALRQ--GKIWRDQV-ATLEFNDAA--LQALRKKGLCDLASE 179 ++ KQ + L AL GK D++ LE D + L L +KGL DL E Sbjct: 134 ----TQATKQLKVLEALEAMGGKTPYDKLNKALELKDMSQILNNLSEKGLLDLTYE 185 >UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGZ0_BDEBA Length = 681 Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust. Identities = 226/558 (40%), Positives = 298/558 (53%), Gaps = 30/558 (5%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L L EQ T +I + +FS LL GVTGSGKTEVYL +L+ VL++GK+ +V+VPEI Sbjct: 127 LNLTDEQQTCFESI-AKFSSFSTHLLFGVTGSGKTEVYLRLLDKVLSEGKRGIVLVPEIS 185 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LTPQ I RF RF + LHS L D ER + W G +I+IG RSALF P NLG+ Sbjct: 186 LTPQLIQRFARRFGDKIAALHSQLTDRERTNQWWDIVEGRKSILIGARSALFCPIDNLGL 245 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEH+ S+KQ E +Y+ RD AV P++LGSATP+LET N + KY L R Sbjct: 246 IIVDEEHEPSFKQDEKLKYNGRDAAVMLGKQMNCPVVLGSATPSLETWKNAVEGKYHLHR 305 Query: 377 LTRRAGN-ARPAIQHVLDLKGQKVQAG---------------LAPALITRMRQHLQADNQ 420 LTRR N A P I+ V+DL+ K L+P L RM Q L +Q Sbjct: 306 LTRRVANRALPDIE-VIDLRKLKSDDEEKQKAITKYSHLPFWLSPDLYERMHQVLDRGDQ 364 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 LFLNRRG A ++C CG ECP CD TLH A HL CH+CD +CP C Sbjct: 365 AALFLNRRGIAQMVVCPACGHTRECPNCDISLTLH-AHSHLICHYCDYHENFKTKCPDCK 423 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 L +GLGTE LE L LFPG I+R DRD + LE +A + G IL+GTQ Sbjct: 424 EGQLEAIGLGTELLETDLTRLFPGKKIARADRDEIQSRADLEDLIANMESGDIDILVGTQ 483 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE----VVL 596 M+AKG FP + LV L+ D DFR+ ER QL TQ++GR+GR K GE V++ Sbjct: 484 MIAKGLDFPKLKLVGLVLADVGFNLPDFRATERSFQLITQMSGRSGRHVKDGESPGLVII 543 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN----NQHAPLF 652 QT + EH + ++ FA L R + PP V R + + A L Sbjct: 544 QTFNTEHDSITFAKNHDFEGFATHELEIRSALNYPPMGRLVSFRIQGTKLGQVEETARLL 603 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 ++ + L P + VLGP A K G++R+ +L++ L Sbjct: 604 ARRAQALKTQFPQYG-SIEVLGPAEAPLSKLRGQFRYHLLIKTTQPAAANPFSRQLLGDQ 662 Query: 713 NTIPDSRKVKWVLDVDPI 730 + +P VK ++D+DP+ Sbjct: 663 DWVPSG--VKILIDIDPM 678 >UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacteria RepID=B5ZDR1_GLUDA Length = 759 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 249/697 (35%), Positives = 352/697 (50%), Gaps = 37/697 (5%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIV----------VS 48 P V LP+P P FDY P + G V VP G++ E G+V + Sbjct: 28 PRVAVLLPLPFPGPFDYAAPPDLPAPPLQPGDIVTVPLGRRTE-TGVVWDPERNLPPEFT 86 Query: 49 VSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 + LK V+ LD +P S+ R + W A Y P G VL AL R G Sbjct: 87 PPPMKSVADGRLKPVIARLD-QPPLPASLRRFVDWVAAYTLSPPGLVLAMAL----RTGT 141 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQAL-AALRQGKIWRDQVAT-LEFNDAALQ 166 A AP W + L+ +P +++ L A G + ++A + ++ Sbjct: 142 AAQAAPALGWAVADPPP-----GLRDTPARRRVLDIAAHDGPLTAAELARRAGVGTSVVR 196 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVT 226 L G + TP + R + L ++ +A FS LL GVT Sbjct: 197 GLADAGALRGVTMTPRPAFVRPDPDHCPPALDGEQAESARALRALAAEGGFSVTLLEGVT 256 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTE+Y+ + LA+GKQ +V++PEI L+ Q RF RF A + HS L R Sbjct: 257 GSGKTEIYMEAIAACLARGKQVMVLLPEIALSSQWTGRFARRFGAEPALWHSDLGPRLRR 316 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W +G A +V+G RSALF PF LG+I++DEEH++++KQ++G YHARD+AV RA Sbjct: 317 VTWHAVADGTARVVVGARSALFLPFAELGLIIVDEEHETAFKQEDGVTYHARDMAVVRAR 376 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LA 404 ++ P++L SATP+LETL NV +YR L LT R G A +D++ + G L+ Sbjct: 377 MDRAPVVLVSATPSLETLANVGAGRYRHLVLTARHGGATMPEVRTIDMRAHPPERGLFLS 436 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 P L +RQ + Q +LFLNRRG+AP LC CG +CP C + H+A+ L CH Sbjct: 437 PVLTEAIRQAIGRGEQGMLFLNRRGYAPLTLCRTCGHRLQCPNCTAWLVEHRARQILTCH 496 Query: 465 HCDSQRPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HC Q P CP C + L P+G G E++ + FP I + DT A Sbjct: 497 HCGYQEATPPACPECHAESSLTPIGPGVERITEEARATFPDARILVMASDTLPGPAATAD 556 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 +A + R ++IGTQ++AKG HFP +TLV ++D D L D R+AER QL QVAG Sbjct: 557 AVARIARREIDLVIGTQIVAKGWHFPHLTLVGVVDADLGLGGGDLRAAERTVQLLHQVAG 616 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRA 641 RAGRA G V+LQ++ P+HP++ L+ +++F Q +RR PP+ + +IV A Sbjct: 617 RAGRAEAPGTVLLQSYTPDHPVMLALVSGDFESFMRQEAEQRRPGFWPPFGRLAALIVSA 676 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPA 678 + A R L ++P D L VLGP PA Sbjct: 677 DTPEAADA-----TARALGQAAPRGD-SLQVLGPAPA 707 >UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZQ3_HALO1 Length = 858 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 244/622 (39%), Positives = 337/622 (54%), Gaps = 33/622 (5%) Query: 131 SLKRSPKQQQALAALRQ--GKIWRDQVATLEFNDAA-LQALRKKGLCDLASETPEFSDWR 187 +L R+PK+ AL+AL + G + E N A+ L+AL GL E S + Sbjct: 245 ALIRAPKRAAALSALERAGGAAAVSALREHEPNIASHLRALAGLGLVHFEQRAAEGSSYA 304 Query: 188 TNYAVSGERL--RLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + +S L Q A+GAI A F+A+LL G+TGSGKTEVYL + L Sbjct: 305 PDDGLSASAAPPALTDAQRAALGAISGGLAGADFAAYLLHGITGSGKTEVYLHAIAEALD 364 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 G+ A+V+VPEI LTPQ ARFR RF V VLHSGL D ER W + ++G A I +G Sbjct: 365 SGRTAIVLVPEISLTPQLAARFRARFGDLVAVLHSGLTDRERFDEWQRLRSGSARIALGA 424 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+F P + +IV+DEEHDSS+KQ+EG RY+ARD+A+ RA +LGSATP+ E+ Sbjct: 425 RSAVFAPVERPAIIVVDEEHDSSFKQEEGVRYNARDVALVRAQRVGGVCVLGSATPSTES 484 Query: 364 LCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADNQ 420 ++ +Y+LL L R P ++ + DL+ K ++ L L + + L Q Sbjct: 485 YWAAERGRYQLLTLPERPTPRPLPTVERI-DLRVYKAESEDMLTAPLRQAIAETLARGEQ 543 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC- 479 VILFLNRRGF +LC CG C +C T H+A++ L CH+C QR VP QCPSC Sbjct: 544 VILFLNRRGFDTFVLCRACGEALRCQQCSVSLTYHRARNMLLCHYCGYQRRVPEQCPSCR 603 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD--TTSRKGALEQQLAEVHRGGARILI 537 ++ GLGTE++ +A F ++R+DRD T +R G + L V R IL+ Sbjct: 604 APGTILRKGLGTEKVADAVAERFAPARVARLDRDVATGARIGEI---LGRVARREVDILV 660 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+ KGH FP VTLV +L D L DFR++ER QL TQVAGRAGR + G V++Q Sbjct: 661 GTQMVTKGHDFPGVTLVGVLCADTGLSLPDFRASERTFQLLTQVAGRAGRGERPGRVLIQ 720 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN----NQHAPLFL 653 + PE + T Y AF R PP+ V +R + + + A L + Sbjct: 721 SFRPEAVAIATAAQHDYAAFYRAEREAREEFGYPPFGHFVALRLDGTDALAVERTAELLI 780 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL---- 709 Q++R L D + VLGP A + GR RW + L +R L+ +I+ L Sbjct: 781 QRVRGSGL-----DAGITVLGPTEAPLARIKGRTRWHLWLLAEARPPLRRLIHAVLYGDI 835 Query: 710 -ALINTIPDSRKVKWVLDVDPI 730 +P +V+ +DVDP+ Sbjct: 836 AGASAQLPA--EVRVSVDVDPV 855 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 9/105 (8%) Query: 4 AHVALPVPLPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLN 58 A +A+ P+ +F Y +PE G V+ G RV VPFG + G+V+S+++A +E+ Sbjct: 33 AELAVQAPVRGSFCYEVPERLRGRLVR-GSRVLVPFGGRG-LTGVVLSLAEAPPAEVDPA 90 Query: 59 ELKAVVEVL-DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI 102 ++A+ +L D EPV + L LWAA YY P G+VL ALP+ Sbjct: 91 RVRAIDGLLADEEPVPVE-LLELCLWAAAYYEAPPGEVLRAALPV 134 >UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECY8_9SPHI Length = 821 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 202/539 (37%), Positives = 299/539 (55%), Gaps = 12/539 (2%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 L+ Q A I ++ + LL GVT SGKT++Y+ ++E + +G Q L ++PEI LT Sbjct: 286 LSEAQQKAFEEIGTSFEEKDVVLLHGVTASGKTQIYIKLIEQAIEKGGQVLFLLPEIALT 345 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 Q + R + F + V HS N++ER+ W K NG+ +V+G RSA+F PF++L +IV Sbjct: 346 TQIVDRIQRYFGDAIGVYHSKFNNNERVEIWNKVLNGKYRVVLGARSAVFLPFQDLKLIV 405 Query: 319 IDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 +DEEH+ SYKQQ+ RY ARD AVY AH + I+LGSATP+LE+ N KKY L+ L Sbjct: 406 VDEEHEPSYKQQDPAPRYQARDAAVYLAHLHKAKIVLGSATPSLESYFNALMKKYGLVTL 465 Query: 378 TRRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPA 433 + R G +Q V+ + K +K+ + + LI + LQ QVILF NRRG+A Sbjct: 466 SERFGGVELPVQEVISISEETKRKKMVSYFSSKLIEEIDAALQLKEQVILFQNRRGYATI 525 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 L+C CG+ +C CD T H+ L CH+C + CP+CGS H+ G GTE+ Sbjct: 526 LICATCGYAPKCVNCDVSLTYHKTSGKLHCHYCGYHQNSINICPACGSVHVEQKGFGTER 585 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 +E+ L+ +FP I+R+D D+T K L+Q ++ ILIGTQM+AKG F +VTL Sbjct: 586 VEEELSLIFPDAKIARLDVDSTRTKNGLQQIISGFQEKKTDILIGTQMVAKGLDFDNVTL 645 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 + +++ D L DFR+ ER QL QVAGRAGR KQG+VV+Q + H ++ ++ Sbjct: 646 IGVINADTLLNYPDFRAFERSYQLLAQVAGRAGRRDKQGKVVIQAYDDHHRIIAQVMDNK 705 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 Y E + ERR PP+T + V + + + QQ N +L L VL Sbjct: 706 YFEMFEDEIRERREFNYPPFTRMIFVDIKHKDMNLLNVAAQQFAN-VLKGQLGSR---VL 761 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRV---RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 GP L + + Q++++ +++ I+ T+ + R V +DVDP Sbjct: 762 GPEQPLVGRVRNYYIKQVIIKSDKNTDIKKVKTILKDTIQQFQAQKEYRGVLVRIDVDP 820 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 3/104 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V LP+ L + Y +P + V G RV V FGK + ++ S+ D + + K Sbjct: 12 VEVILPLSLAINYTYRVPFELNAQVAVGKRVVVQFGKNKIYTALIRSIGDQPP-KVYQAK 70 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +++V+D PV T + W DYY G+V+ ALP L+ Sbjct: 71 YIIDVVDEHPVITPVQLQFWEWMMDYYICNEGEVMAAALPASLK 114 >UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae RepID=C8WGN6_EGGLE Length = 780 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 274/786 (34%), Positives = 391/786 (49%), Gaps = 67/786 (8%) Query: 1 MPVAHVALPVP---LPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDASE 54 M +A V L +P L + Y +PE ++ GC V VPFG +Q +G ++ + + +E Sbjct: 1 MKLASVILDIPTQALDAPYTYAVPEEAGDQPIEVGCAVLVPFGPRQA-VGFIIGIEERAE 59 Query: 55 ------LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDV--LFH---ALPIL 103 L +LK +V + S P F W ++ Y P+ LF +P + Sbjct: 60 GDWPAGLDPAKLKGIVRAV-SRPYFDEEGAACAQWLSERYIAPLSSCVRLFTPPGGVPRM 118 Query: 104 LR-QG------RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA 156 +R QG P W A D K + KQ AAL +G++ R Sbjct: 119 VRAQGGYWRLEEPTVGEVDDRWVVPGPALA-DFEPRKNAVKQASIAAALERGEL-RVAEL 176 Query: 157 TLEFN--DAALQALRKKGLCDL-------------ASETPEFSDWRTNYAVSGERLRLNT 201 T EF + L+AL K+G+ + A P + L Sbjct: 177 TAEFGAVSSPLKALEKQGVVRIEHRRRMRGMAEGSAGSAPSADSAAVPSFTPSPKPPLTR 236 Query: 202 EQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 QA A+ AI + + L+ GVTGSGKTEVYL +E LA G+ A V+VPEI LTP Sbjct: 237 GQADALAAIDAARSRGAGEVVLVDGVTGSGKTEVYLQAIEETLAAGRTACVLVPEISLTP 296 Query: 260 QTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVI 319 QT+ARFR RF V V+HS ++ ER W ++G A +V+G RSALFTP NLG+IVI Sbjct: 297 QTVARFRGRFGDLVAVMHSRMSQGERYDQWDFIRSGAARVVVGARSALFTPLSNLGLIVI 356 Query: 320 DEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL--CNVQQKKYRLLRL 377 DEEH+ SYKQ RYHARD+AV+ A ++LGSATP++E L C +++ Sbjct: 357 DEEHEGSYKQDSAPRYHARDVAVWMARRAGAAVVLGSATPSIEALHACAKNPSWHQVSLP 416 Query: 378 TRRAGNARPAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 R G P +Q V+D+ + ++ A L + + L A + +L LN+RGFA L Sbjct: 417 ERANGKPLPEVQ-VVDMAKEFSGGSRSMFALPLARALEEELAAGRKAVLLLNQRGFAKFL 475 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQL 494 LC +CG++ ECP C T H+ + L CHHC + P P CP CGS +L G GT+++ Sbjct: 476 LCRECGFVPECPSCSTSLTYHERGNFLICHHCGYRIPTPPVCPECGSPYLKKFGAGTQRV 535 Query: 495 EQTLAPLF-------PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 E L L PGVPI R+D DTTS KGA ++ L E A +L+GTQM+AKG Sbjct: 536 EAELRVLLDEMPGVDPGVPIVRMDADTTSGKGAHQRLLEEFAAADAAVLLGTQMIAKGLD 595 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQ 607 F DVTLV +++ D L D+R++ER L QVAGRAGRA G V++QT+ + P ++ Sbjct: 596 FEDVTLVGVINADTMLKLPDYRASERTFDLVEQVAGRAGRAELPGRVLVQTYEADAPAIR 655 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHN--NQHAPLFLQQLRNLILSS 663 F L +RR++ PP+ ++V+V ++D + A L + Sbjct: 656 AAAAYDRALFLRDELPKRRLLGYPPYVRMANVLVWSKDEPAVRRVAAELQAALEEAVRD- 714 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 + VL P + K G +RW I+++ P+ L + L L R Sbjct: 715 -FGGDGWSVLPATPCVLAKLRGTYRWHIVVKCPADADLS---DALLPLFRRRKPDRDANV 770 Query: 724 VLDVDP 729 +DVDP Sbjct: 771 AVDVDP 776 >UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepID=C5EIZ7_9FIRM Length = 767 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 233/659 (35%), Positives = 357/659 (54%), Gaps = 48/659 (7%) Query: 12 LPRTFDYLLPEGMT--VKAGCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVLD 68 + RTF Y +PE ++ + AG +V +PFG+ ++R G VV ++D +E+ N++K V ++ Sbjct: 17 VDRTFQYRIPEHLSGSIHAGQQVYIPFGQGNRQRKGYVVGLTDQAEIDENKIKDVAGIVQ 76 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG--QA 126 + L W + Y + L LP+ +Q A ++G +A Sbjct: 77 GSVTAESQLIWLAWWMKERYGSTMNQALKTVLPV--KQKVKEAPKRQLKCLLDQEGLLRA 134 Query: 127 VDLNSLKRSPKQQQALAALRQGKI--WRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 V+ K + + L A + + + + L A ++ L + G+ + E Sbjct: 135 VEEARRKNHKARLRLLEAFLLAPVIPYEEAMNRLSLTAAVVKPLEEGGVLKV-----EVV 189 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSA----------------------- 219 + N + +RL + T +A + TF A Sbjct: 190 ERYRNPLLEMQRLAGMPREGTTFAGGGTAGNPGTFPALNQAQQEIADSILRDYGEGIRRT 249 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 +L+ G+TGSGKTEVY+ ++ +VL G+Q +V++PEI LT QT+ RF RF V V++S Sbjct: 250 YLIHGITGSGKTEVYMELIAHVLQAGRQVIVLIPEISLTWQTVMRFYTRFGNRVSVMNSR 309 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 ++ ER + +A+ G+ I+IG RSALF PF NLG+I+IDEEH+++YK + RY AR+ Sbjct: 310 MSAGERYDQYERARTGDIDIIIGPRSALFAPFSNLGLIIIDEEHENAYKSELSPRYDARE 369 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQK 398 A RA + +ILGSATP+LE+ + +Y L + RA +A A ++DL+ ++ Sbjct: 370 AAAVRAEANHASLILGSATPSLESYTKALRGEYGLFTMKERAKADASLAKVEIVDLR-EE 428 Query: 399 VQAGLAPALITRMRQHLQAD-----NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 ++AG ++ +R Q L D Q++LF+NRRG+A + C CG +CP CD T Sbjct: 429 LRAG-NRSIFSRRLQELMEDRLAKKEQIMLFINRRGYANFVSCRSCGEAIKCPHCDVTLT 487 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 LH+ + CH+C P+ CPSCGS ++ P G GT+++E A LFP I R+D D Sbjct: 488 LHR-NGRMMCHYCGYSMEQPKVCPSCGSRYIAPFGTGTQKIEAMAAGLFPDAGILRMDLD 546 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 TTSRKG ++ L+ RG A ILIGTQM+ KGH FP VTLV L D +LF++D+R E+ Sbjct: 547 TTSRKGGHQEILSAFARGEADILIGTQMIVKGHDFPKVTLVGALAADLSLFASDYRCGEQ 606 Query: 574 FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 L TQ AGRAGR +G VV+QT+ P+H +Q + Y+AF Q A RR++ PP Sbjct: 607 TFALLTQAAGRAGRGELEGNVVIQTYQPDHYCIQAAARQDYEAFYGQETAYRRLLGYPP 665 >UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERS5_AMOA5 Length = 832 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 218/592 (36%), Positives = 323/592 (54%), Gaps = 17/592 (2%) Query: 150 IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGA 209 I + Q+ + + AALQ L ++ + L + S AV+ L+ Q A+ + Sbjct: 247 IAKKQLLEKDVSSAALQKLIQQDI--LIEKAVIISRLAQLKAVATPHTTLSPAQTQALLS 304 Query: 210 IHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF 269 I + T + LL G+TGSGKTE+Y+ ++++VL Q Q L ++PEIGL Q + R + F Sbjct: 305 IENHFKTKNTALLHGITGSGKTEIYVRLIQSVLEQDGQVLYLLPEIGLATQIVQRLNKIF 364 Query: 270 NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ 329 + V HS +ER+ W +VIG RSALF PF L +I++DEEH+++YKQ Sbjct: 365 GNKMGVYHSKYASNERVEIWNNVLQNNVQLVIGARSALFLPFDRLQLIIVDEEHETAYKQ 424 Query: 330 QEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAI 388 + RYHARD A+ A Q ++LGSATPA+ET N QQ KY L++LT R Sbjct: 425 LDAIPRYHARDAALMLATFHQAKVLLGSATPAIETYYNAQQGKYGLVKLTERFNQTPLPR 484 Query: 389 QHVLDLKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAE 444 +++L+ ++ +Q L+ ++ LQ Q I+F NRRG+A LLC C + Sbjct: 485 IELVNLRTEQQRKGIQGEFTSILLQKLESILQQQEQAIIFQNRRGYASYLLCQTCAEVPT 544 Query: 445 CPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG 504 C +C T HQ + L CH+C VP CP C + L VG GTE++E+TL FP Sbjct: 545 CQQCSVSLTYHQFRDALVCHYCGFHCKVPPLCPVCDAPTLKNVGFGTEKIEETLQHFFPN 604 Query: 505 VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF 564 + R+D DTT RK + EQ + + G IL+GTQM+ KG F V+LV +LDVD L+ Sbjct: 605 KRVQRMDLDTTRRKHSYEQIIDNLESGQTDILVGTQMITKGLDFGQVSLVGVLDVDRLLY 664 Query: 565 SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 DFR+ ER QL TQV+GRAGR GKQG+V++QT +P+ P+LQ ++ Y+ Q L E Sbjct: 665 FPDFRANERCFQLITQVSGRAGRRGKQGQVLIQTTNPQLPILQDIINYDYEQMYTQELGE 724 Query: 625 RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRG 684 R+ + PP+ + + + H N+ Q+ L ++++ +LGP L K Sbjct: 725 RQKFRYPPYIRLIKITCQ-HTNERLVKECAQVLAGYLCKLVSEDN--ILGPQAPLVAKVR 781 Query: 685 GRWR---WQILLQHPSRVRL---QHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++R W L + V L Q I T +L + R+++ + DVDPI Sbjct: 782 NQYRIDTWVKLAKSSEPVLLAIKQQIQQATKSLTSE-KQFRQIRIIFDVDPI 832 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 14/170 (8%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 A + LP+P+ + Y +P + VK G RV V GK++ GIV + + P + K Sbjct: 14 AELILPLPIAKLLTYGIPLNLVDIVKQGSRVIVSLGKKKILTGIVNKIHQRA--PNHPAK 71 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 +++VLD EP+ L W A YY +GDV+ ALP G ++ Y Sbjct: 72 NIIDVLDEEPIVNTYQLALFHWIAQYYMCSVGDVVKAALP----SGFKLSSQSKIYLHP- 126 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATLEFNDAALQALRK 170 A + +S+ +Q +A L+ GK + Q+ L A + L+K Sbjct: 127 ----AFEEDSIPLLENEQLIVATLKNGKPLSYQQIEQLIGQKEAYKQLKK 172 >UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepID=C3Q6Q1_9BACE Length = 820 Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust. Identities = 205/551 (37%), Positives = 309/551 (56%), Gaps = 23/551 (4%) Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 +G+ LN Q A I + LL GVT SGKTE+Y+ +++ VL GKQ L ++ Sbjct: 278 TGDINPLNIAQQQAYSNILQCFREKNVCLLHGVTSSGKTEIYIHLIQEVLKTGKQVLYLL 337 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA--IVIGTRSALFTP 310 PEI LT Q R + F + + HS D+ER+ W K + GE + +++G RS++F P Sbjct: 338 PEIALTTQITERLKRVFGHRLGIYHSKFPDAERVEIWQK-QLGEKSYDVILGVRSSIFLP 396 Query: 311 FKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 F+NLG+++IDEEH+++YKQQ+ RYHAR A+ A + ++LG+ATP +ET N Sbjct: 397 FRNLGLVIIDEEHENTYKQQDPAPRYHARSSAIMLASMFKAKVLLGTATPGVETYFNATS 456 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDLKG----QKVQAGLAPALITRMRQHLQADNQVILFL 425 KY L+ L R + R ++D+K +++Q +P L+ ++++ L+ QVILF Sbjct: 457 GKYGLVELKERYKDIRLPHIELVDIKELAHQKRMQGPFSPVLVKQIKEALERKEQVILFQ 516 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRGFAP + CH CGW+ +C CD T H+ + L CH+C VPR CP+CG L+ Sbjct: 517 NRRGFAPMIECHTCGWVPKCKNCDVSLTYHKGLNQLTCHYCGYTYQVPRSCPACGGVELM 576 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G GTE++E + +FP ++R+D DTT + A E+ + G ILIGTQM++KG Sbjct: 577 HRGFGTERIEDDIKLIFPEAKVARMDLDTTRTRTAYEKIITNFELGKTDILIGTQMVSKG 636 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 F V++V +L+ D L DFRS ER QL QVAGRAGR KQG V+LQT P+ P+ Sbjct: 637 LDFDHVSVVGILNADTMLNFPDFRSYERAFQLMAQVAGRAGRKNKQGLVILQTKSPDLPV 696 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV----RAEDHNNQHAPLFLQQLRNLIL 661 + +++ Y+ LAER+M + PP+ + V R ED + A QLR Sbjct: 697 IHQVIHNDYEQLYYDQLAERQMFKYPPYYRLIYVYLKHRKEDVLDLAADTMAAQLR---- 752 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 S L D VLGP + + +++++ ++ + + LA+ I + + Sbjct: 753 -SGLGDR---VLGPDKPPVARIQTLFIKKMIVKVEQNASIKKVRDYLLAVQRAILEDERF 808 Query: 722 KWVL---DVDP 729 + +L DVDP Sbjct: 809 RSLLVYYDVDP 819 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 3/98 (3%) Query: 6 VALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 V +P+P+ + Y LP+ M V+ GCRV VPFGK++ IV +V A+ E K + Sbjct: 7 VIVPLPIANQYTYSLPQEMEEMVQIGCRVIVPFGKKKFYTAIVTNVHYAAPEGY-ETKDI 65 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 EVLDS PV + W A+YY +GDV A+P Sbjct: 66 AEVLDSSPVLLPKQYEFWQWLAEYYLCTLGDVYKAAIP 103 >UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F6_9FIRM Length = 722 Score = 367 bits (942), Expect = e-99, Method: Compositional matrix adjust. Identities = 247/685 (36%), Positives = 357/685 (52%), Gaps = 45/685 (6%) Query: 27 KAGCRVRVPFGKQQERIGIVVSVSDAS----ELPLN--ELKAVVEVLDSEPVFTHSVWRL 80 + G RV V F +Q +G V +V++ E +N LK ++ VLD + T ++ L Sbjct: 29 EKGKRVSVDFNGRQ-IVGFVDAVTEVDDGQPETQVNGRPLKPLLSVLDENALITPELFEL 87 Query: 81 LLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQ 140 W A+ P+ LP L+ M A G+ L +P+Q++ Sbjct: 88 AKWMAEDTLSPVISCFQAMLPSKLKPKSSNQKIKME-QIAVYVGEHPLL-----TPRQKE 141 Query: 141 ALAALR-QGKI----WRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 LA LR +G WR Q + A + L K G L S T + + + + A + Sbjct: 142 VLAWLRTEGPTVLAKWRKQ------SPAITRTLEKLGCVRLDSRTVKAREEQADQAEAF- 194 Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 L LN +Q V I ++ T LL GVTGSGKTEVYL + VL G+Q L++VPEI Sbjct: 195 -LPLNADQKRVVQEIQTS--TQDVILLHGVTGSGKTEVYLHLARQVLDAGQQVLILVPEI 251 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 LTPQ +AR + RF V + HS LN+ ++ + + +A+IV+GTRSA+F PF +LG Sbjct: 252 SLTPQMVARVKGRFQNDVAIYHSALNNQQKYEQYCRVFEKQASIVVGTRSAVFMPFDHLG 311 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I++DEEHDSSYKQ +YH RD+A++RA +ILGSATP+LE+ + Y L Sbjct: 312 LIILDEEHDSSYKQDSLPQYHCRDIAIHRARHFGCKVILGSATPSLESYARALKGVYGLA 371 Query: 376 RLTRRAGNARPAIQHVLDLKGQ-KVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAPA 433 L R P + V+D+K Q + Q+G L+ L ++ ++ Q IL LNRRG++P Sbjct: 372 ELKERVNRQLP-VCTVVDMKNQNRAQSGILSDVLRQKIADRIKRGEQAILLLNRRGYSPL 430 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 + C CG +CP CD + H++ ++CH C S+ P+ CP CGS G GT++ Sbjct: 431 IKCGQCGETLQCPHCDVALSYHKSIQKMKCHLCGSEFPLVTVCPKCGSRTFAAPGYGTQK 490 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 LE+ + LFP + R+D DTTSRK A ++ L + R A IL+GTQM+AKG FP VTL Sbjct: 491 LEEEVTRLFPQARVLRMDADTTSRKEAHQKLLEQFGRHEADILVGTQMIAKGLDFPQVTL 550 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 V +L+ D DFRS E L Q AGR+GR+ GEVV+Q P H + + Sbjct: 551 VGILNADAGTARPDFRSVEMTFDLIMQAAGRSGRSQTPGEVVIQAFDPNHFAVVAGSRQD 610 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAE----DHNNQHAPLFLQQLRNLILSSPLADEK 669 Y +F Q + R + PP+T + + D Q A + Q LR L Sbjct: 611 YQSFFYQEMQYRHLGGYPPYTYLIALTFSDVRPDRPKQSAQVVAQALRQSSL-------- 662 Query: 670 LWVLGPVPALAPKRGGRWRWQILLQ 694 VLGP K R+R +++L+ Sbjct: 663 FKVLGPSDLF--KLQDRYRSRLVLK 685 >UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE7_9FIRM Length = 781 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 221/688 (32%), Positives = 355/688 (51%), Gaps = 84/688 (12%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP-LNELKAVVEVLD-----S 69 + Y+ + + +K G RV V FG R+GIV+ + P L++LK +++VLD S Sbjct: 18 YTYIFDKDIYLKPGMRVMVSFG-NGTRVGIVLKIYSTYNGPYLSKLKNIIDVLDAEPIIS 76 Query: 70 EPVFTHSVW---RLLLWAADYY-------------------HHPIGDVL----------- 96 E + +W R LL + + +P G L Sbjct: 77 EDLIELGLWMKDRYLLGYSKAFAPLLPPGDLKKIKKSVNIKKYPYGQDLEDLKKINLDKL 136 Query: 97 ----------------------FHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 F LPI + + F+ E+ Q + Sbjct: 137 YEDMDSNMKNLCNKLYKKGILKFSYLPITSIKIKTEKYLKKSNNFSMEKLQGL------- 189 Query: 135 SPKQQQALAALRQGKIWRDQ--VATLEFNDAALQALRKKGLCDLASETP-EFSDWRTNYA 191 + +Q QA+ + + K + + L+ + ++AL KK DL +E E + Sbjct: 190 TKRQSQAVNYIIEKKDVSKKLLMKELKMSSTPIEALIKK---DLVTEFDREVKTDKKYVG 246 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 G LN EQ A+ +I S +L G+TGSGKTEVYL++ + L +G+ +V+ Sbjct: 247 KVGTNHTLNEEQEDAIRSIEGTKKEVS--ILYGLTGSGKTEVYLNLAKIALDRGEDVIVL 304 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEIGLT Q I RFR +F V ++HS L+ +R + K NG+ IV+G RSA+F PF Sbjct: 305 VPEIGLTSQMIERFRNKFQDDVAIIHSKLSKGQRYEEYRKILNGDVHIVVGVRSAVFVPF 364 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 N +I++DE HDSSY + +Y + ++A+ R ++ ++LGSATP + QQ K Sbjct: 365 TNCSLIILDEFHDSSYTFHDSLKYDSIEVAIKRMENKG-KVVLGSATPDISHYYLAQQGK 423 Query: 372 YRLLRLTRRA--GNARPAIQHVLDLKGQKVQAGLA---PALITRMRQHLQADNQVILFLN 426 Y L L RA G+ P + ++D++ + + L+ AL ++++ L + Q+ILFLN Sbjct: 424 YNLSCLKNRAFHGSRLPDTK-IIDMRKELLMGNLSIFSRALKDKIKEKLDKNEQIILFLN 482 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 RRGF+ + C CG + +C CD T H+ + L CH+C + +P+ CPSCGS ++ Sbjct: 483 RRGFSNFVSCRTCGHVIKCDNCDISMTYHKTNNRLICHYCGYTKSLPKICPSCGSKYIKQ 542 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 GLGT+++E+ + FP I R+D+DTTS+K + E + ++IGTQM++KG Sbjct: 543 FGLGTQKVEEEVKKFFPNARILRMDKDTTSKKDSYENYYHMIKNKEVDVIIGTQMISKGF 602 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 FPDVTLV ++ D +L+ + ++S+E QL TQV+GRAGR+ K+G+V++Q+++P H + Sbjct: 603 DFPDVTLVGVIASDISLYISSYKSSEDTFQLITQVSGRAGRSYKKGDVIIQSYNPNHYAI 662 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWT 634 Y+ F ++ L ERR PP++ Sbjct: 663 MYAADNSYEGFYKEELEERRTFLYPPFS 690 >UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Bacteria RepID=Q110J1_TRIEI Length = 914 Score = 367 bits (942), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 222/602 (36%), Positives = 314/602 (52%), Gaps = 45/602 (7%) Query: 135 SPKQQQALAALRQ--GKIWRDQV-ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 +P+QQ+ + LRQ G++W ++ T + + ++ L +KG + + E Sbjct: 283 TPRQQEVMEVLRQSGGEMWLTELLNTCKTTTSVVKKLEEKGYAVIQEQ--EILRREQGRG 340 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 + + +++ T T + F+ LL GVTGSGKTEVYL + +L GK ALV+ Sbjct: 341 NTRDEIKMLTSYQTEALTTITKIQEFAQVLLHGVTGSGKTEVYLQAIAPILENGKSALVL 400 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEIGLTPQ RFR RF V V HS L+ ER W G I+IGTRSA+F P Sbjct: 401 VPEIGLTPQLTDRFRARFGKKVYVYHSALSAGERYDTWRNMTWGIPQIIIGTRSAIFAPL 460 Query: 312 KNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLC----- 365 LG+IV+DEEHD+S+KQ YHAR +A +RA E P+ILGSATP+LE+ Sbjct: 461 PKLGLIVLDEEHDNSFKQDRPAPCYHARTVAKWRAELENCPLILGSATPSLESWLETRKY 520 Query: 366 ----NVQQKKYRLLRLTRR---AGNARPAI--QHVLDLKGQKVQAGLAPALITRMRQHLQ 416 +Q Y L + + GN + + L L + + P I MRQ L+ Sbjct: 521 YQDKKIQASPYLLENIDKNVSPTGNTQNLTPNTYYLSLPERIHSRPMPPVEIVDMRQQLR 580 Query: 417 ADN--------------------QVILFLNRRGFAPALLCHDCGWIAECPRCD----HYY 452 N Q ILF++RRG++ + C CG + ECP CD ++Y Sbjct: 581 QGNRTMFSYPLQEALQELQETKQQGILFIHRRGYSTFVSCRSCGHVMECPHCDVSLSYHY 640 Query: 453 TLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDR 512 T A LRCH+C+ P++CP CGS G GT+++ Q L FPG+ R D Sbjct: 641 THEGATELLRCHYCNYNELQPQRCPKCGSPFFKFFGSGTQKVAQELTRQFPGLRYIRYDS 700 Query: 513 DTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAE 572 DTT +K A L + G A +LIGTQML KG VTLV ++ DG L +D+R+ E Sbjct: 701 DTTRKKDAHRNLLNQFANGEADLLIGTQMLTKGLDLAQVTLVGVVSADGLLHFSDYRANE 760 Query: 573 RFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 R Q QVAGRAGR G V++QT+ PEHP++Q + Y++F E L R + PP Sbjct: 761 RTFQTLLQVAGRAGRGDNPGRVIIQTYTPEHPVIQAVQRNDYESFVETELQGRAELHYPP 820 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQIL 692 + +++R ++ + Q+L + +L EK +LGP PA + R+RWQIL Sbjct: 821 YGRLILLRLSSYDPTEVAVTAQELAS-VLREKEGKEKYDLLGPAPAPIARIANRYRWQIL 879 Query: 693 LQ 694 L+ Sbjct: 880 LK 881 Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 8/98 (8%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP----LNELKAVVEVLDS 69 + F Y +P + ++ G V VPFG+QQ +G +++ S+LP + LK + +++ + Sbjct: 96 KLFTYKIPPELDIQPGDIVIVPFGRQQ--VG-GIAIRKTSKLPEGLSSDRLKNISDII-T 151 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG 107 + F + W+LL A YY P+ V+ ALP L +G Sbjct: 152 KGFFPATYWQLLEKVAIYYQTPLIKVIRAALPPGLLKG 189 >UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae RepID=UPI0001C17122 Length = 884 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 215/545 (39%), Positives = 307/545 (56%), Gaps = 23/545 (4%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 L +Q+ A+ AI AA F+ LL GVTGSGKTEVYL + +L +GK ALV+VPEIGLT Sbjct: 347 LTPDQSQALEAI-IAAKGFNKILLHGVTGSGKTEVYLQAIAPLLGEGKSALVLVPEIGLT 405 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 PQ RFR RF V+V HS L+ ER W + G + +VIGTRSA+F+P NLG+I+ Sbjct: 406 PQLTDRFRARFGNKVQVYHSNLSRGERYDTWRQMFTGSSQVVIGTRSAVFSPLPNLGIII 465 Query: 319 IDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLCNV----QQKKYR 373 +DEEHDSS+KQ YHAR +A +RA E P+ILGSATP+LET +V + Sbjct: 466 LDEEHDSSFKQDSRIPTYHARTVAQWRAELENCPLILGSATPSLETWVDVTLPPSPTHNQ 525 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ----ADNQVILFLNRRG 429 L L +R + ++D++ Q+++ G + Q LQ Q ILF++RRG Sbjct: 526 YLSLPQRINSKPLPPIEIVDMR-QELKQGNRSMFSRTLEQALQELKGKGQQGILFIHRRG 584 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQ----HHLRCHHCDSQRPVPRQCPSCGSTHLV 485 + + C CG++ ECP CD H + L+CH+C+ R P+ CP CGS +L Sbjct: 585 HSTFVSCRSCGYVLECPNCDVSLAYHHLEAGGPELLKCHYCNYGRSHPKLCPECGSPYLK 644 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G GT+++ Q + FP + + R D DTT KG+ + L + +G A +L+GTQML KG Sbjct: 645 FFGSGTQKIVQEINRQFPDLQVIRFDSDTTRNKGSHRKLLDQFAKGEADLLVGTQMLTKG 704 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 P VTLV ++ DG L +D+R++ER Q TQVAGRAGR + G V++QT+ PEH + Sbjct: 705 LDLPQVTLVGVVAADGLLHLSDYRASERAFQTLTQVAGRAGRGEESGRVIIQTYTPEHAV 764 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 + + Y +F LA+R + PP +++R + P+ +Q +I ++ Sbjct: 765 IAAVQNHDYQSFCRAELAQRDALSYPPCGRLILLRLTSLD----PIQVQNTAQIIATTFP 820 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 L +LGP PA + R+RWQILL+ + Q G + P V + Sbjct: 821 HQPGLEILGPAPASILRVANRYRWQILLKFAPNILPQMPDWG--QIFQLCPPG--VSLTI 876 Query: 726 DVDPI 730 DVDP+ Sbjct: 877 DVDPL 881 Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Query: 18 YLLPEGMTVKAGCRVRVPFGKQQ-ERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHS 76 Y +PE + + G + VP+G QQ I I + S +PL +++ V +++ E F + Sbjct: 98 YQIPETLNINPGDILTVPWGTQQLGAIAIRLLSQLPSGIPLEKVREVKDIVSKE-FFPRT 156 Query: 77 VWRLLLWAADYYHHPIGDVLFHALP 101 W LL A YY+ P+ V+ ALP Sbjct: 157 YWELLGRIATYYYTPLIKVIRVALP 181 >UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VUU0_9CLOT Length = 824 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 222/627 (35%), Positives = 337/627 (53%), Gaps = 28/627 (4%) Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLE-FNDAALQALRKKGL-CDLA 177 TE+G+ +K SPKQ++ + L+ G +V + AL KKGL C Sbjct: 204 TEKGET---GGVKLSPKQREVFSLLQTVGAASVKEVCYFTGVTAGVVDALVKKGLACCFE 260 Query: 178 SETPEFSDWRTNY-----AVSGERLRLNTEQATAVG---AIHSAADTFSAWLLAGVTGSG 229 SE +R Y + E + L EQ A A + + D LL GVTGSG Sbjct: 261 SER-----YRNPYDGAPESAVKEEIVLTQEQQRAYEEQLAQYQSPDG-GISLLYGVTGSG 314 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KT V+L +++ + + ++MVPEI LTPQ +A F+ R+ V V HSGL+ ERL W Sbjct: 315 KTSVFLKLIDRAVEDKRGVILMVPEISLTPQMLALFQRRYGRQVAVFHSGLSMGERLDEW 374 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + KNG+A I +GTRSA+F PF+NLG+I++DEE + +YK ++ R+HAR++A +R + Sbjct: 375 KRVKNGDALIALGTRSAVFAPFENLGLIIMDEEQEYTYKSEQAPRFHAREIAKFRCRWHR 434 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAP---A 406 + L SATP++E+ Q+ Y L ++ R G A+ V D+ + ++ P Sbjct: 435 CLLTLASATPSVESYYLAQKGVYSLSTISNRYGGAKLPRVVVADMNQELLEGNTGPFSSV 494 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L+ + ++L+ Q IL LNRRG+ + C CG CP C T H A L CH+C Sbjct: 495 LMECLAENLRLRRQSILLLNRRGYHTFVNCRACGEPVTCPHCSISLTYHAANRRLMCHYC 554 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 P +CPSC + G GT++ E+ + LFP I R+D DTT K + E++L Sbjct: 555 GYSIPFTDECPSCHQRQVRYAGAGTQKAEEAVEELFPEARILRMDADTTMAKYSHEKKLK 614 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + G I++GTQM+AKG FP+VTLV +L D AL+S DFRS ER L TQV GR+G Sbjct: 615 QFADGEYDIMVGTQMVAKGLDFPNVTLVGVLSADQALYSDDFRSYERAFALLTQVVGRSG 674 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV----RAE 642 R K+G V+QT+ PE+P++Q + Y AF + + R+ M PP+ +V + E Sbjct: 675 RGEKEGLAVIQTYTPENPVIQMAARQDYGAFFQGEIQMRKAMLYPPFADLCVVGFSGQQE 734 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 ++ Q A F ++L L + A + V+GP A PK GR+R+++++++ + Sbjct: 735 ENVEQAARYFTRELIALA-QAEYASLPMRVIGPAKAAVPKVSGRYRYKLIIKNRFDKSFR 793 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDP 729 +I L + K +D++P Sbjct: 794 ELIARLLRQYGKQKEYAKTSVFVDINP 820 Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust. Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 14 RTFDYLLPEGMTVKA--GCRVRVPF-GKQQERIGIVVSVSD--ASELPLNE-LKAVVEVL 67 + +DYL+P+ + KA GCRV VPF G + R G+++ V + A E LK+V VL Sbjct: 20 KAYDYLIPQTLWAKAEKGCRVLVPFGGGNRTRQGLLMDVEEIRAGRTGSEEGLKSVKAVL 79 Query: 68 DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 D P+ + + L W + Y + D + LP Sbjct: 80 DQTPLLSPEMLLLARWMKERYFCTLFDAVRVMLP 113 >UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=D1BMC0_VEIPT Length = 727 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 240/748 (32%), Positives = 372/748 (49%), Gaps = 39/748 (5%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M VA V + P L + YL+PE V G RV +P G +E GI++ + E P Sbjct: 1 MRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREE-GILIGYDELVEPP 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 L+ +V+VLDSEP FT + +YY GD L + + + AP Sbjct: 60 EFTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDAL---RLFTVNKTLKSYEAPKE 116 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL-QALRKKGLCD 175 W +V S ++ +++ A L G + + ++ + Q KG+ Sbjct: 117 EWLVVMPEFSVAQFSERKKKQRELAKYLLEVGGASKALLLAKGYSRIVIKQVSEAKGIVV 176 Query: 176 LASETPEFSDWRTNYA---VSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGK 230 A F +T + + L Q G I +A ++ +LL GVTGSGK Sbjct: 177 EA----RFKATKTTFDELLTEEVNIPLTEAQQAVYGPIQAAMNSHEHKTFLLHGVTGSGK 232 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 T++YL ++Q K A+++VPEI LT Q + RF E F V V HS L +R + W Sbjct: 233 TQLYLRATAKCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWE 292 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + + ++ I+IG RSA+F P +++G+IV+DEEHD SYKQ++ RYHAR++A++RA + Sbjct: 293 RLRRKDSHIIIGARSAVFAPAEDIGLIVVDEEHDPSYKQEDMVRYHARNVALWRAEAHGC 352 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA--PALI 408 P+ILGSATP++ + +Q +Y LL L R ++D+K + + + + Sbjct: 353 PVILGSATPSVTSYYKAKQGEYHLLELPNRIFEQPMPKVTIVDMKEEILHGNYSVFSDAM 412 Query: 409 TRMRQH-LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 +R+ QH L NQ+I+ LNRRG++ ++C DCG CP CD HQA LRCH+C+ Sbjct: 413 SRLIQHTLDEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCE 472 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 P+P CP C S + G GT+++E+ L F I+R+D+D T K E L + Sbjct: 473 HHEPIPTVCPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQLAEDILHD 532 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 IL+GTQM++KGH F DVT V +L D L + ++ER L TQ +GRAGR Sbjct: 533 FGAHKYDILLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGR 592 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHN 645 K G VV+QT++P + + Y F + + R+ + PP+ H++VR +D Sbjct: 593 GEKPGSVVIQTYNPLNYAIIKSKAHDYIGFYNEEIKNRKALGYPPFREMIHMVVRHQDMK 652 Query: 646 NQHAPLFLQQLRNLI---LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 L+ + N I L S ++ + + GP A K +R I+++ L+ Sbjct: 653 T------LESIANRIVDDLESYKGNQDILINGPYEAPIKKVRDMYRLAIMIRGTDLTNLK 706 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPI 730 I + ++DVDP+ Sbjct: 707 EYIYNSWIFTQE-------GLLIDVDPV 727 >UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1L0_ACIC5 Length = 825 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 226/607 (37%), Positives = 338/607 (55%), Gaps = 33/607 (5%) Query: 126 AVDLNSLKRSPK----QQQALAALR--QGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 A L+ R P+ QQ LAAL G + Q+ L+ D+ L L ++GL + Sbjct: 200 AQSLDGEARLPRLNENQQTILAALAGIDGGVPVAQLRELDVPDSTLGTLVRRGLVAIEER 259 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQ---ATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 +F + GE + +Q A G++ F +LL GVTGSGKT VYL+ Sbjct: 260 PVDFLMSGLSIRHHGEHKLIEAQQQALAQITGSVEEGG--FRPYLLHGVTGSGKTAVYLA 317 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + + L +GK ++++VPEIGLTPQ A+ F + V +LHS L ER W + + E Sbjct: 318 AMRHALERGKSSILLVPEIGLTPQMAAQLHRAFGSEVALLHSALLPEERAEQWHRIRRRE 377 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A +V+GTRSA+F P ++LG+I++DEEHD SYKQ+ RYHARD+AV RA ++LGS Sbjct: 378 ARVVVGTRSAIFAPVEDLGLILVDEEHDGSYKQESVPRYHARDVAVMRAKLAGATVVLGS 437 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAG----LAPALITRM 411 ATP+LE+ N + KY + + R + RP + ++D++ + + G + LI + Sbjct: 438 ATPSLESWNNAIEGKYTRIEMHERI-HQRPMPEVELVDMRREFQETGAEHLFSRTLIDQT 496 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA----------QHHL 461 + L Q I+ LNRRG++ +LC CG +C C T H+A L Sbjct: 497 QATLDRGEQAIVLLNRRGYSFVVLCRACGEKLQCENCSISLTYHKAVTDAEAHAPVGQRL 556 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH+C +R +P++CP C S HL +G G++Q E+ L +FPG I R+DRDT +G L Sbjct: 557 ECHYCGYKRTIPQRCPKCDSEHLYFLGAGSQQGEERLQEIFPGARIGRMDRDTVRGRGDL 616 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ LA++H G +L+GTQM+AKGH VTLV ++ D AL DFR+AER QL TQV Sbjct: 617 ERLLAKLHSGEINLLVGTQMIAKGHDIHGVTLVGVVGADHALGLPDFRAAERTFQLLTQV 676 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIV 639 AGRAGR G+V++QT++PEH ++ + +FAE+ L RR M+ PP+ ++V++ Sbjct: 677 AGRAGRGELPGKVIVQTYYPEHYAVECARQHDFHSFAERELKYRRWMRYPPYAAITNVLL 736 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 ++ED + L + ++ D + VLGP A + R +LL+ SR Sbjct: 737 QSEDFGQ--LAHWAAALGRWLSAAEFPDVR--VLGPATAPIARIKRMHRMHLLLKSQSRQ 792 Query: 700 RLQHIIN 706 LQ ++ Sbjct: 793 SLQRVLR 799 Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 6/99 (6%) Query: 6 VALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 VALPVPL R F Y G+ + G RV VPF + ++ GIV+ + D + P E K ++ Sbjct: 7 VALPVPLDRAFTY--STGLFAPEVGARVLVPF-RNEKLSGIVLRLHD--DPPPVEAKPLL 61 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL 103 V+D + + + + L W A YY PIG+VL LP++ Sbjct: 62 AVMDEQSILSPQLLDLARWIAQYYVAPIGEVLRAMLPLI 100 >UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H119_9FIRM Length = 675 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 193/549 (35%), Positives = 303/549 (55%), Gaps = 12/549 (2%) Query: 194 GERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 G+++ L Q I + S +LL GV GSGKTE+Y++ +E +A K +V+ Sbjct: 126 GKKVMLTPTQQALANEIKKEVEASSPEIFLLKGVAGSGKTEIYINAVEQAVASSKSGIVL 185 Query: 252 VPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +PEI LT Q ARFRE F + + ++HSGL ++R + +L+ ++ +A +VIG RSA+F P Sbjct: 186 LPEIALTKQITARFREHFGDEKIAIIHSGLTRAQRFNEFLRIRDNDAMVVIGARSAVFAP 245 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 +NLG+I+IDEE DSSYK RY A ++ V R+ E PI+LGSATPA+ ++ Sbjct: 246 VRNLGIIIIDEEQDSSYKATNSPRYDAVEVGVMRSRFESAPIVLGSATPAISDYYRAKEG 305 Query: 371 KYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAGLAPA---LITRMRQHLQADNQVILFLN 426 K RLL L R G + P I+ ++++ + + +P L+ MR + QV+LFLN Sbjct: 306 KMRLLSLDERYNGGSFPDIE-IVNMTDEMRKGNFSPLSALLMKEMRATIDKGKQVLLFLN 364 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 RRG+AP ++C C I +C +C H+ CH+C S +C CGS + Sbjct: 365 RRGYAPIIMCESCKEILKCEKCGIPLVYHREDGRALCHYCGSSETAFSKCKKCGSKQIQY 424 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 GLG EQL + + F ++R+D D + G LE+ L + G +LIGTQ+++KG Sbjct: 425 RGLGIEQLTELVQGEFKDAKVARLDSDVAVKAGKLEEVLEQFSDGKIDVLIGTQIISKGL 484 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 F +VTL ++++ D L DFR+ ER QL Q AGRAGR +G+VVLQT + ++ Sbjct: 485 DFENVTLASIIEADAGLQIPDFRADERVFQLIVQTAGRAGRRDDRGKVVLQTLSKDADVV 544 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA 666 + Y+ F +A R+ M PP+ S + + + A F +N I+ + Sbjct: 545 NMAAQQDYEGFYSSEIAFRKKMGYPPFGSIIKLEFSSDKKEGALDFANSFKNSIIRTLEG 604 Query: 667 DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR--LQHIINGTLALINTIPD--SRKVK 722 K+ VLGPVP+ K G +R++++L+ P VR H+I + + + S+K + Sbjct: 605 IFKIDVLGPVPSFIQKSDGMYRYRLILKMPREVREKYSHLIRWQIDVFKNRKNKASKKER 664 Query: 723 WVLDVDPIE 731 ++D +P + Sbjct: 665 ILVDAEPYD 673 >UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R7_ABIDE Length = 741 Score = 364 bits (934), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 250/743 (33%), Positives = 380/743 (51%), Gaps = 44/743 (5%) Query: 12 LPRTFDYLLPEGMTVKA---GCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVL 67 L +TF Y +PE + G V VPFG +E VV + + +E+ + +K ++ Sbjct: 14 LDKTFCYRVPEHLGDAENLIGAEVIVPFGMGNRETKAYVVEIKEDTEVDKHLIKDILMKS 73 Query: 68 DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAV 127 ++ + L W + Y + + L L + A E + + Sbjct: 74 ENSVNIETKLIELACWLKNNYGGSMNEALRSVLQAPKKVNHIKARTVSLLTDRDEAAEKL 133 Query: 128 DLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA-ALQALRKKGLCDLASET-----P 181 K+ + + LA +G+ + E + A A ++L K G+ ++ E Sbjct: 134 KEFERKKYSLKTKILAKAIEGEFSYENFIKNEKSAASAFKSLVKDGIIEIKEELLYRKPV 193 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLE 239 + SD T A GE EQ AV + + + +LL G+TGSGKTEVY+ ++E Sbjct: 194 KISDKNTGKAELGE------EQKRAVDKVVNDYKSGIMGRYLLFGITGSGKTEVYMEIME 247 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 V+ G+Q + ++PEI L+ Q + R RF + V++S ++ ER +L+AKNG+ I Sbjct: 248 EVIRSGRQVIFLIPEIALSFQMVERLSARFGERISVMNSKMSQGERYDQYLRAKNGDIDI 307 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 ++G RSALFTPF NLG+I++DEEH+ SYK + RYHAR+ A+YRA E +ILGSATP Sbjct: 308 IVGPRSALFTPFSNLGLIIVDEEHEGSYKSSKTPRYHARETALYRAGKENAAVILGSATP 367 Query: 360 ALETLCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQH 414 +LE + KK +L LT R AG P I+ V+DL+ ++++AG ++ L ++ Sbjct: 368 SLEAVKLASDKKIEVLMLTERPAGALLPEIE-VVDLR-EELRAGNKSIISKKLSELIKDR 425 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L Q ILF+NRRG+A + C CG +CP CD T H+ L CH+C + +P Sbjct: 426 LAKKEQTILFINRRGYAGFVSCRSCGEAVKCPHCDVSLTFHRPD-RLICHYCGYEEKMPD 484 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 +CP C S ++ GLGTE++E+ + FP + R+D DTT+ K E + + +G A Sbjct: 485 KCPKCESPYISTFGLGTEKVEEIVKNDFPVARVLRMDGDTTTGKYGHEAIIEKFKKGEAD 544 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 ILIGTQM+ KGH F VTLV +L D +LF DFR+AE +L Q AGRAGR +GEV Sbjct: 545 ILIGTQMIVKGHDFEKVTLVGILAADLSLFLGDFRAAETTYELLVQAAGRAGRGRYRGEV 604 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI------VRAEDHNNQH 648 V+QT+ PEH +Q+ Y F + + R++ + PP H++ V+ E+ Sbjct: 605 VIQTYKPEHYAIQSAATGNYKEFYTKEIHYRKLGEYPP-EKHLLGIILYSVKPEEVTRAG 663 Query: 649 APL--FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 L +L+ ++ E++ V GPV A PK +R I L+ R L N Sbjct: 664 EVLAGYLKGEKS---------EEVTVNGPVWAAIPKIRDIYRKIIYLKSSVRNELVRAKN 714 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 P KV D +P Sbjct: 715 QVEIYTKENPHFNKVSVQFDFEP 737 >UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NKU6_9DELT Length = 820 Score = 363 bits (933), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 215/539 (39%), Positives = 300/539 (55%), Gaps = 10/539 (1%) Query: 198 RLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 +L TEQ + AI A ++ +LL GVTGSGKTEVYL LAQG+Q LV+VPEI Sbjct: 281 QLTTEQQAVLAAIQPAVTGGRYAPFLLHGVTGSGKTEVYLQAAATALAQGRQVLVLVPEI 340 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 L Q F RF V +LHSGL R W +G+A I IG RSA+F P + G Sbjct: 341 ALATQLEGHFCSRFGDIVALLHSGLAAGARFDQWSLLLSGQAKIAIGARSAIFAPLPDPG 400 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I++DEEHD +YKQ++ RY+ARDLA+ R +Q +ILGSATPA+ + Q K++LL Sbjct: 401 LIIVDEEHDPAYKQEDQPRYNARDLALLRGLQQQATVILGSATPAVASFYQAQAGKFKLL 460 Query: 376 RLTRRAGN-ARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGF 430 +++R + PA++ ++DL+ K +G +P L+ ++++L A Q ++FLNRRGF Sbjct: 461 TMSKRVEDRPLPAVE-IIDLQEVKTVSGRPPLFSPQLVKALKENLAAGRQSLVFLNRRGF 519 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 A +LC DCG +C C TLH+ + L CHHC P CP C S LV G G Sbjct: 520 ANLMLCKDCGRPIQCQHCQVSLTLHKKRGQLLCHHCGFHLPRNVVCPHCRSGTLVAAGFG 579 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 TE+LE+ L+ L P I+R+D+DT+ + L V ILIGTQM+ KGHHFP Sbjct: 580 TERLEEELSRLLPSARIARLDQDTSRDRRRYLAVLKAVRDHEIDILIGTQMITKGHHFPQ 639 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV ++ D L D+++AER QL TQV+GRAGR G V++QT +H + Sbjct: 640 VTLVGIVWADAGLGIPDYKAAERTFQLLTQVSGRAGRGEHPGRVIVQTLQADHYSVALAQ 699 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 Y ++ +A RR + PP+ + +R + N Q L + A + Sbjct: 700 AHDYQGLYQREIALRRRLGFPPFGRLINLRLDGENEQRCQELAAGLGEIARRQQPAT--V 757 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 VLGP PA + GR+RWQ+LL+ + + G A + + VK LDVDP Sbjct: 758 QVLGPAPAPLARLRGRYRWQLLLKGAEVATIHTLCRGICAEFAKLAGASTVKLSLDVDP 816 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 2/101 (1%) Query: 2 PVAHVALPVPLPRTFDYLLP-EGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 P VA+ P+ Y P E ++ G R+ VP GK+Q G +++ S + ++ Sbjct: 10 PYLEVAVCAPIEHPLTYTPPPEAGILQPGQRLLVPLGKRQI-TGYLLACQQQSPVAGAKI 68 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 + + VLD EP+F ++ W ADYYHHPIG+++ ALP Sbjct: 69 RPALAVLDPEPLFPAAMIPFFRWLADYYHHPIGEIIQSALP 109 >UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes RepID=A6LEB0_PARD8 Length = 820 Score = 363 bits (933), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 211/563 (37%), Positives = 313/563 (55%), Gaps = 26/563 (4%) Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALA-----------ALRQGKIWRDQVATLEFNDAAL 165 YW T+ QAV LKR+ KQ+ L AL + ++ + + A L Sbjct: 194 YWDETKL-QAV-FEELKRAKKQELLLVSFLDLSHTLNPALSKELSKKELLERSGYTSAVL 251 Query: 166 QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGV 225 + L K+G+ L S E + + E L+ Q A G IH A T LL GV Sbjct: 252 EGLLKRGI--LESYEKEVGRLQVSVCRLQEPNPLSPAQEKAYGEIHEAFKTKEVCLLHGV 309 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 T SGKTE+Y+ ++ VL G+Q L M+PEI +T Q R + F + V HS +D+ER Sbjct: 310 TSSGKTEIYVRLIHEVLRLGRQVLYMLPEIAITTQITERLAKLFGDKLLVYHSKFSDNER 369 Query: 286 LSAWLKA-KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVY 343 + W K + E +V+G RS+LF PFK+LG+I++DEEH+++YKQQ+ RYHAR+ A+ Sbjct: 370 VEVWNKLLHSDEPMLVLGVRSSLFLPFKDLGLIIVDEEHENTYKQQDPAPRYHARNAAIV 429 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNA-RPAI--QHVLDLKGQKVQ 400 A +LGSATP++++ N KY L+ L+ R G+ P I V +LK +K+ Sbjct: 430 LAGMHGGKTLLGSATPSIDSYFNATAGKYGLVELSTRYGDCLMPEIITVDVKELKRKKIM 489 Query: 401 AG--LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 +P L+ ++R+ L Q ILF NRRGFAP + C CGW+ C CD T H+A Sbjct: 490 KDTLFSPLLVEKVREALSRGEQAILFQNRRGFAPMIECRGCGWVPHCVNCDVSLTYHKAH 549 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 + L CH+C +P+ CP C T G GTE++E+ +A FP + R+D DT + Sbjct: 550 NQLVCHYCGYTYRLPQVCPECKGTEFKMQGFGTEKVEEEIAGQFPAAKVERLDFDTARTR 609 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 A E+ +++ +G +ILIGTQML+KG F +V++V +L D + DFR+ ER QL Sbjct: 610 TAYERIISDFEKGKTQILIGTQMLSKGLDFGNVSVVGILSADSLMNFPDFRAHERAYQLM 669 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QV+GRAGR K+G V+LQT PEHPL++ + + Y L+ER M + PP+ ++ Sbjct: 670 VQVSGRAGRRDKRGTVILQTTQPEHPLIRMVQHFAYKEMVSLQLSERSMFRYPPYYRLIV 729 Query: 639 V----RAEDHNNQHAPLFLQQLR 657 + R E+ + + L+ ++LR Sbjct: 730 LILRSRNEEALQEMSALYAEKLR 752 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 2/103 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+PL ++ Y +PE M V GCRV V FGK++ IV+ V D + Sbjct: 1 MKYADVILPLPLENSYTYRIPEDMERAVTPGCRVIVHFGKKRYYTAIVMEVHDREPVSDF 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 E K + +LD+ PV R W + YY +GDV ALP Sbjct: 61 ETKEIYALLDATPVLRRPQLRFWKWISSYYICKLGDVYKAALP 103 >UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacteria RepID=B8EQ16_METSB Length = 744 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 265/754 (35%), Positives = 373/754 (49%), Gaps = 50/754 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V PV + + Y+ P M + G V P G ++ IG+V + A N L+A Sbjct: 10 VVDVLFPVAVDTAYSYVAPAAMGLVPGAFVEAPLGPRRA-IGVVFAQRPAPPGASN-LRA 67 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVL-------FHALPILLRQG-RPAANAP 114 V LD P+ + + W A + P G VL FHA P R G R AP Sbjct: 68 VAARLDISPL-GDRLRDFIDWVARWGMSPRGMVLRMAIRAPFHAAPEPKRVGLRLTGAAP 126 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV--ATLEFNDAALQALRKKG 172 + +P +++ LAA + G + + + + L ++G Sbjct: 127 A-----------------RLTPARERTLAAAQAGGLMTKAALAKAAGVSASVIDGLIRQG 169 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 + L + PE + + L + A A A A +FS LL GVTGSGKTE Sbjct: 170 VFTLETLAPEPAAPVGDPDFRQPLLSQDQAAAAAELAKAVLAQSFSVTLLEGVTGSGKTE 229 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLK 291 Y + L G+Q LV++PEI LT Q + RF RF APVE HSG+ + R W Sbjct: 230 TYFEAIAAALRAGRQTLVLLPEIALTSQFVDRFGARFGAAPVE-WHSGIGAARRARIWSA 288 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 +GEA I+IG RSALF PF++LG++++DEEHD +YKQ++G YHARD+AV R EQ Sbjct: 289 VASGEAKIIIGARSALFLPFQSLGLVIVDEEHDGAYKQEDGVVYHARDMAVVRGRIEQCA 348 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRR-AGNARPAIQHV-LDLKGQKVQAGLAPALIT 409 +IL SATP++ET N Q +YR L L R G A P I+ V + LK ++PALI Sbjct: 349 VILASATPSIETRVNADQGRYRRLVLKDRFGGRAMPKIEAVDMRLKPPPRGKWISPALIA 408 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + +L Q +LFLNRRG+AP LC CG +CP C + H+ + L CHHC Sbjct: 409 ALADNLGKGQQSLLFLNRRGYAPLTLCRSCGHRFQCPNCAAWLVDHRFRKALICHHCGHM 468 Query: 470 RPVPRQCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 P CP+C + L+ G G E+LE+ A LFP + + D L + V Sbjct: 469 ERRPELCPNCEAVESLMACGPGVERLEEEAAELFPDARLMILSSDLAGGAERLRAEFEAV 528 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 RG I+IGTQ++AKGH+FP +TLV ++D D L S D R+AER QL QV GRAGR Sbjct: 529 ARGACDIVIGTQLVAKGHNFPGLTLVGVIDADIGLTSGDPRAAERTFQLLQQVTGRAGRF 588 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAEDHNN 646 G ++Q+ PEHP+++ +L + F + + +RR LPP+ + +IV D + Sbjct: 589 ETPGRALVQSFQPEHPVMRAILSGDSEKFYAEEIEQRRRAGLPPFGRLAALIVSGNDAAS 648 Query: 647 QHAPLFLQQLR----------NLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQH 695 A L + L E +L +LGP A GR R+++L++ Sbjct: 649 AEAFARALARAAHDLPRSDGWTLAAAGGLPTEGELSLLGPAEAPIAILRGRHRFRLLIRA 708 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 P LQ +N LA P V +D+DP Sbjct: 709 PRSSDLQGFLNALLA--AGPPQRGGVNAAIDIDP 740 >UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacteria RepID=B6JD02_OLICO Length = 805 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 254/742 (34%), Positives = 368/742 (49%), Gaps = 41/742 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL--NEL 60 V V +PV L +T+ Y +PEG+ + G V VP ++ + VV + + P N L Sbjct: 86 VVDVLVPVALDQTYSYSVPEGLDLTVGDVVTVPLAARE--VTAVVWAENPNPDPRLHNRL 143 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL-------PILLRQGRPAANA 113 K + LD P + R + W + Y G V L P +R G A Sbjct: 144 KDISGKLDVPP-LREELRRFVDWVSTYTLASRGMVARMTLRMGEHLGPERVRLGVRLVGA 202 Query: 114 PMWYWFATEQGQAVDL--NSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 P A + + +DL + L R PK + A A + V + + Sbjct: 203 PPARMTAA-RARVLDLLSDGLLR-PKSEAAKEAGVSVSVIEGLVDEGTLTVEPMPREKPM 260 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 D A P+FS ++ A A + D F+ LL GVTGSGKT Sbjct: 261 QPPDPAFAEPDFSPEQS--------------AAAAEMHALAQKDDFAVALLDGVTGSGKT 306 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWL 290 EVY + ++ +G+QAL+++PEI LT Q + RF +RF P+E HS L R WL Sbjct: 307 EVYFEAVAEIIRKGRQALILMPEIALTGQFLDRFSQRFGVRPIE-WHSELTPRTRARNWL 365 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 NGEA IV+G RSALF P+ +LG+IV+DEEHD +YKQ +G YHARD+AV R H +I Sbjct: 366 AVANGEAQIVVGARSALFLPYADLGLIVVDEEHDQAYKQSDGAHYHARDMAVVRGHIAKI 425 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALI 408 P++L SATP++ET N + +Y + L R G +DL+ + G ++P L Sbjct: 426 PVVLSSATPSVETEVNARTGRYTRIALPSRFGGQHMPQIEAIDLRREGPPRGRFISPPLA 485 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 ++ ++ Q +LFLNRRG+AP LC CG C CD + H+ + L CHHC Sbjct: 486 EAVKFAVERREQALLFLNRRGYAPLTLCRACGHRFSCNICDAWLVDHRFRQRLVCHHCGF 545 Query: 469 QRPVPRQCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 P P QCP CG+ L +G G E+L++ +A LFP + D + + +L E Sbjct: 546 SMPRPHQCPQCGAEESLAAIGPGVERLQEEVANLFPEARTMVLSSDLITDIETMRSELNE 605 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + G I+IGTQ++AKGH+FP + LV ++D D L + D R+AER QL QV GRAGR Sbjct: 606 IAEGRVDIIIGTQLVAKGHNFPRLNLVGVVDADLGLGNGDPRAAERTFQLLNQVIGRAGR 665 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +G LQTH PEHP+++ L+ AF + + R PP+ + N Sbjct: 666 EQGRGVGYLQTHQPEHPVMKALVASDRKAFYDSEIEARERAAYPPFGRLAALIIAAANRP 725 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A F ++L L +P +E++ VLGP A GR R++IL++ L + Sbjct: 726 DAEGFARKLVGL---AP-REERVIVLGPAEAPLAVIKGRHRFRILVKSQRVFDLSGYLRT 781 Query: 708 TLALINTIPDSRKVKWVLDVDP 729 LA S ++ +D+DP Sbjct: 782 WLAAAPKTKGSLTLE--VDIDP 801 >UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK26_MOOTA Length = 821 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 243/637 (38%), Positives = 348/637 (54%), Gaps = 36/637 (5%) Query: 117 YWFATEQGQAVDLNSL-KRSPKQQQALAALRQG--KIWRDQVATLEFNDAALQALRKKGL 173 YW G A L + +R+P+Q + L AL +G + D A + AL+ L + GL Sbjct: 195 YWAVPRPGAAAALAGMERRAPRQARILRALLEGGPRPAADLAAGNGYT--ALRRLEEMGL 252 Query: 174 CDLASETP---------EFSDWRTNYAVSGER------LRLNTEQATAVGAIHSAADTFS 218 +L P F Y G L+LN +Q A+ AI A Sbjct: 253 IELTLGPPAGAEGMPPSRFEGGSEEYGNHGGAGGGVAPLQLNRDQEEALRAIEGALSQGG 312 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +LL GVTGSGKTEVYL LA+G++AL +VPE L PQ +AR R+ V V+H Sbjct: 313 TFLLYGVTGSGKTEVYLRATRAALARGRRALFLVPEHSLIPQVVARLRQAVGDGVAVIHG 372 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 L+ ER + W +A+ GE ++ G+RSALF P +LG+I++DEEH SYKQ RY AR Sbjct: 373 NLSPGERAAIWERARRGEIRVIAGSRSALFAPLPDLGLIIVDEEHAGSYKQDAAPRYDAR 432 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQ 397 ++A+ R H E ++LGSATP+ ET ++ LL+L RR N + PA++ ++DL+ + Sbjct: 433 EVAIKRGHLEGAVVVLGSATPSTETFYLARRGAINLLQLPRRVENLSLPAVE-IVDLR-E 490 Query: 398 KVQAGLAPALITRMRQHL----QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 + +AG L R+RQ + A Q ILFLNRRG+AP +LC CG++ C CD T Sbjct: 491 EFRAGHQGYLSRRLRQEVAAALAAGRQAILFLNRRGYAPHVLCRRCGYVPLCRHCDVALT 550 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 HQ LRCH+C P CP+CG + LV +G GT+++E L+PG I R D D Sbjct: 551 YHQ-DGTLRCHYCGRGEPARANCPACGGS-LVRLGAGTQRVEAEARALWPGTRIIRADGD 608 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 TT+RKG E+ G A IL+GTQ +A+G FP VTLV +++ D +L+ DFR+ ER Sbjct: 609 TTARKGRWEEIYRTFAGGHADILVGTQTIARGMDFPGVTLVGVVNADLSLYQPDFRARER 668 Query: 574 FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW 633 QL TQVAGRAGR G+V++QT++P P + + Y F EQ +A RR PP+ Sbjct: 669 TFQLLTQVAGRAGRK-SAGKVIIQTYNPADPAITLAAAQDYRRFYEQEIAGRRAGGYPPF 727 Query: 634 TSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 V V + + ++ +L S A ++ VLGP P + +RWQ++L Sbjct: 728 VKLVRV---GFSGRDEAGVIEAAHDLAGSIKGAGAQIEVLGPAPGFPVRVQDNYRWQLVL 784 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + P+ R + + G LA N P ++ ++DV P+ Sbjct: 785 KVPAWSRNKARLAGCLA--NYRP-RHDIRMIVDVGPV 818 >UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PM74_CHIPD Length = 815 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 186/467 (39%), Positives = 268/467 (57%), Gaps = 5/467 (1%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 +L+ Q A+ + ++ LL GVT SGKT++Y+ ++E +A GKQ L ++PEI Sbjct: 277 FKLSPAQEKALAEVRNSFAAKPVTLLHGVTSSGKTQLYVKLIEEYVAMGKQVLYLLPEIA 336 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LT Q + R ++ F + + HS N++ER+ W K KNG+ I++G RS+L PF++LG+ Sbjct: 337 LTAQIVRRLQKHFGNKIGIYHSRFNNNERVEIWNKVKNGDLKILLGARSSLLLPFQDLGL 396 Query: 317 IVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 I++DEEHD SYKQQ+ RYHARD A+Y A + ++LGSATP+LE+ N QQ KY L+ Sbjct: 397 IILDEEHDPSYKQQDPAPRYHARDAAIYYAGLFRAKVLLGSATPSLESYFNAQQGKYGLV 456 Query: 376 RLTRRAGNARPAIQHVLDLKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 L+ R G ++D+K ++ +Q P L + + A NQVILF NRRG+A Sbjct: 457 ELSERFGGLEMPEIAIVDVKKERAEKSMQENFTPQLNAAINNSVAAGNQVILFQNRRGYA 516 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P L+C CGWI C CD T H+ Q L CH+C ++ P P+ C +CGS L P GT Sbjct: 517 PFLMCATCGWIPSCKNCDVSLTYHKNQDKLHCHYCGTRYPYPQTCAACGSQTLNPKSFGT 576 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E++E L LFP I+R+D D K + + + + + IL+GTQM+ KG F +V Sbjct: 577 EKIEDDLQQLFPKARIARMDMDAVRNKDSHNKMIQLLEQRDIDILVGTQMVVKGLDFDNV 636 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 LV +L D L DFR ER QL QV+GRAGR +G+V++Q + HP+L + Sbjct: 637 NLVGILSADSLLSFPDFRVNERAFQLMEQVSGRAGRKHGKGKVIIQASNTRHPVLSYVTT 696 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 Y A +AER PP+T + + + N Q Q L N Sbjct: 697 HDYKAMYVAEIAERENFSYPPFTRLLKITLKHKNQQTVEQAAQVLGN 743 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/108 (36%), Positives = 60/108 (55%), Gaps = 5/108 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+ LP+ + Y +P M ++KAG RV V GKQ++ GIV ++ + + P + Sbjct: 1 MKFADVILPLALPKNYTYAVPPHMEESLKAGSRVAVQLGKQKKYAGIVKAIHEQA--PAD 58 Query: 59 -ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 K ++++LD +PV + W A YY G+VL ALP L+ Sbjct: 59 YRTKPLLDMLDKDPVVYPTQLSFWQWLASYYMCTEGEVLNAALPAHLK 106 >UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID=C6JQJ7_FUSVA Length = 773 Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 195/610 (31%), Positives = 331/610 (54%), Gaps = 22/610 (3%) Query: 128 DLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 D ++LK K + A+ ++ + + + +F+ + L ++ L L E + R Sbjct: 176 DFSNLK--EKFEDAVVYFQKKEEVQKKNLESKFSKELINKLIREKLLILKKNIKEDENQR 233 Query: 188 TNYAVSGE----RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + +S E + LN EQ A I + + + +LL G+TGSGKTEVY+ +++ Sbjct: 234 EIHEISEEVSEKNVVLNEEQEKAKEIIKNGDNKY--YLLKGITGSGKTEVYIELIKEAFK 291 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 GK ++ +VPEI LTPQ I RFR F + +LHS L + ER W +G IV+G Sbjct: 292 NGKGSIFLVPEISLTPQMINRFRNEFRENIAILHSRLTNRERADEWYNIYSGNKKIVLGV 351 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+F P +NL I++DEEH+++YKQ RY+A+ +A+ R E +ILGSATP++E+ Sbjct: 352 RSAIFAPVENLEYIILDEEHETTYKQDSNPRYNAKYVAIKRTELEGAKLILGSATPSIES 411 Query: 364 LCNVQQKKYRLLRLTRRAGNA-RPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 ++ Y L+ + R N+ P I+ ++D+K ++ + L+ ++ L QVI Sbjct: 412 SYYAEKGIYTLVTMDSRYNNSILPEIE-IVDMKKEE-DLYFSKKLLDEIKITLLKGEQVI 469 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 L LNR+G++ + C DCG + EC C + + +Q L+C++C R C CGST Sbjct: 470 LLLNRKGYSTYIQCKDCGHVEECTHCSIKSSYYASQGILKCNYCGQTRKYTGHCSKCGST 529 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 +L+ G G E++E+ + F V I R+D +++ K E+ + I+IGTQM+ Sbjct: 530 NLLHSGKGVERVEEEIKKYFD-VRIIRVDSESSKNKDFYEKMYFDFLDKKYDIMIGTQMI 588 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 +KG HFP+VTLV +++ D L DFR+ E+ QL TQV+GRAGR K+G+V++QT+ PE Sbjct: 589 SKGLHFPNVTLVGVINADTILNFPDFRAGEKTFQLVTQVSGRAGRGEKKGKVIVQTYQPE 648 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 + + + Y+ F + ++ R +++ PP++ + + + +F+++ Sbjct: 649 NYTFRAIEKSDYNKFYSEEISNRELLEYPPFSKTINIGISSRKEKELEIFVKE-----FF 703 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR--VRLQHIINGTLALINTIPDSRK 720 + DE + + GP+ +L + R+R+ I ++ + + +N L D R Sbjct: 704 KNIEDENVEMYGPMRSLVYRVKDRFRYNIFIKGSKKNISIFKRKLNKKLTDYKKSDDFR- 762 Query: 721 VKWVLDVDPI 730 V+DVDPI Sbjct: 763 --IVVDVDPI 770 >UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8Z6_9ACTN Length = 841 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 258/787 (32%), Positives = 384/787 (48%), Gaps = 80/787 (10%) Query: 12 LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE------LKAV 63 L F Y +P + + G V VPFG++ E +V +LP E +K V Sbjct: 60 LSEPFAYGVPLALDGVCQVGATVLVPFGRRVEAGYVVARSESLGKLPGAEGLEPFRIKPV 119 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP------ILLRQGR------PAA 111 EV+ + F+ + L W + Y P+ + L LP ++ R+ P Sbjct: 120 REVVAAP-AFSAASAELAFWMSREYVAPLSECLRLLLPPGGAGKVVRREDGSYAYEPPTV 178 Query: 112 NAPMWYWFA-TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN-DAALQALR 169 + W + TE+G++ +R+ +Q+Q + AL G + ++ + + A +++L Sbjct: 179 TSVTVRWVSLTEEGRS--FEPAERAVRQRQLIDALSCGPVTTRELNLMNGDLSATIRSLE 236 Query: 170 KKGLCDLASETPEFSDWRT-------NYAVSGERLRLNTEQATAVGAIHSAADTFSA--W 220 K+G+ + E WR + A + L Q A+ AI A + S Sbjct: 237 KRGVVTVE----ERRSWRGCEGSTTLSSANASAPKELTAGQQNALDAIARATEAASGDVV 292 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 L+ GVTGSGKTEVYL+ +E VLA G+ A V+VPEI LT QT+ RFR RF V V HS L Sbjct: 293 LVDGVTGSGKTEVYLTAIERVLAHGRSACVLVPEISLTAQTVGRFRSRFGDAVAVFHSRL 352 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDL 340 + ERL W ++G A +V+G RSALF P +LG+IVIDEEH+ SYKQ RYHAR++ Sbjct: 353 SAGERLDQWDMVRSGAARVVVGARSALFCPLADLGLIVIDEEHEQSYKQGSSPRYHAREV 412 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTR-----RAGNARPAIQHVLDLK 395 A A ++LGSATP+ E L + + R TR R G AR V DL+ Sbjct: 413 AAKLAQLHGCALVLGSATPSAEALARCEAGGHGGARWTRVEMPERPGTARLPEVIVADLR 472 Query: 396 GQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 + + L+ + + ++ + +L NRRGFA L+C +CG + C C Sbjct: 473 REFASGSRSIFSKPLLDALDEVVERRQKAVLLHNRRGFASFLMCRECGCVPTCKHCSTAL 532 Query: 453 TLHQAQHHLRCHHCDSQ---RPVPR---QCPSCGSTHLVPVGLGTEQLEQTLAPLFP-GV 505 T H+ H L CH C S RP P CP CGS +L +GLGT+Q+E L L P V Sbjct: 533 TYHERTHTLECHTCGSSYRVRPYPEYGSACPKCGSRYLAKMGLGTQQVEDALRALLPEDV 592 Query: 506 PISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFS 565 + R+D D+T KGA ++ L + +L+GTQM+AKG FP+VTLV +++ D AL Sbjct: 593 AVIRMDADSTRTKGAHQKLLEQFDAAECAVLLGTQMIAKGLDFPEVTLVGVINADYALKM 652 Query: 566 ADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAER 625 DFR+ ER L QVAGRAGR G V++QT+ P+ P+++ + F E L R Sbjct: 653 PDFRAGERAFDLLEQVAGRAGRGEAPGRVIIQTYLPDEPVIRAVKTHDRSVFTEHDLGMR 712 Query: 626 RMMQLPPWT--SHVIVRAEDHNNQH------------------APLFLQQLRNLILSSPL 665 R PP+ ++V+V +D AP+ + Sbjct: 713 REALYPPYVRLANVLVWGKDERAARGLVMRIAEELRVEFGLDAAPMLRPVVETGSAGVEF 772 Query: 666 ADEKLW----VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 + +L +LGP P + + R+R+ I+++ P L ++ ++ T P V Sbjct: 773 SSRELLSRPQILGPTPCVIERAKDRYRFHIVVKAPLNCDLSGALSAAVSRAGTRPG---V 829 Query: 722 KWVLDVD 728 +DVD Sbjct: 830 SIAVDVD 836 >UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae RepID=A1HMX8_9FIRM Length = 811 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 215/548 (39%), Positives = 313/548 (57%), Gaps = 28/548 (5%) Query: 196 RLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 R+ L EQ AV I +A + ++L+ GVTGSGKT+VY+ QG+Q +VMVP Sbjct: 276 RMALTNEQRQAVTQILAAIASREHKSFLIHGVTGSGKTQVYIEAAAAARQQGRQVIVMVP 335 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI LT QT++RF ERF V V+HS L+ ER AW + + GEA IVIG RSA+F P Sbjct: 336 EIALTGQTVSRFNERFGEDVVVVHSRLSAGERHDAWQRIRAGEAGIVIGARSAVFAPCTQ 395 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 +G+I++DEEH+ +YKQ+E RYH R++A+ RA ++LGSATP+LE+ ++ Sbjct: 396 IGLIILDEEHEFTYKQEESPRYHTREVALMRARQAGASVVLGSATPSLESYYQALAGRHV 455 Query: 374 LLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL----QADNQVILFLNRR 428 LL L+ R G A PA+ V+D++ +++ AG + +R+ L Q Q I+ LNRR Sbjct: 456 LLTLSERVDGRALPAVT-VVDMR-EELAAGRRGVISQPLRELLTQTRQEGGQAIILLNRR 513 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+A +LC +CG + C CD H +RCH+C R P CP+CGS ++ G Sbjct: 514 GYATFVLCRECGHVLRCEHCDVSLVYHATDKTIRCHYCQKTRQAPSLCPACGSRYIRYFG 573 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GT+++E+ LA LFP + R+D+DTT+ K A E+ L+ RG IL+GTQM+AKG Sbjct: 574 TGTQKVEEELAALFPEARVVRMDQDTTTGKMAHERILSAFSRGEYDILLGTQMVAKGIDI 633 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P+VT V ++ D +L DFR+AE+ L TQ AGRAGR + G VV+QT++PEH ++ Sbjct: 634 PNVTAVGIIAADTSLNLPDFRAAEKTFALITQAAGRAGRGSQPGHVVVQTYNPEHYAIKA 693 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ------HAPLFLQQLRNLILS 662 Y AF A RR + PP+ +++ H + HA +L N LS Sbjct: 694 GAAHDYHAFYNIEAAYRRQLHYPPFGG--LIKLTVHGTEETLVCGHAQNLADEL-NRALS 750 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 S K V+GP PA K +R IL++ + ++ L++ SR+ Sbjct: 751 SI---GKTQVVGPFPAPIAKIEDIFRMNILIKSNAMAEVKE------TLVSMGVASRR-D 800 Query: 723 WVLDVDPI 730 +LD+DP+ Sbjct: 801 VILDIDPL 808 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 79/288 (27%), Positives = 122/288 (42%), Gaps = 41/288 (14%) Query: 3 VAHVALPVP---LPRTFDYLLP-EGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 +A VA+ + + TF YL+P E V G RVRVPFG Q+E G VV+V + +E Sbjct: 4 IAEVAVNIAVRTIAATFSYLIPPELAFVGRGWRVRVPFG-QREAEGFVVAVKEQAEA--E 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK V+ VLD EP F ++ + W ++YY P+ + L +P G+ + + Y Sbjct: 61 GLKPVLSVLDDEPWFDENMLQTAEWMSNYYLCPLAEALRLFVP-----GKGELKSHIAYR 115 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + + S + S + Q L LR + +F L ALRK +L Sbjct: 116 LNESESKPSSSLSCQISDEMNQVLNYLRAKSLTAQHQLVKKFGPNVLTALRKLERLNLVE 175 Query: 179 ETP-EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S +R Y +RL L + AA+T +GK Sbjct: 176 RAAMSISKFRPRYE---QRLMLAVNR-------REAAETLDRL-------TGKP------ 212 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 AQ + V++ E LTP + ++R + ++ +GL SER Sbjct: 213 -----AQQRLLTVLMEESELTPNRLKQYRISADTVKRLIAAGLVRSER 255 >UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ED7 Length = 814 Score = 360 bits (925), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 197/547 (36%), Positives = 298/547 (54%), Gaps = 18/547 (3%) Query: 195 ERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 + + L+ EQ +A A+ SA +A+LL GVTGSGKT V+ ++ + + G+QA++++ Sbjct: 268 DEIVLSDEQQSAHDAVLSALFDRKAAAFLLHGVTGSGKTSVFEKLISDTVKMGRQAMLLI 327 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEIGLTPQ + RFR F V V+HSGL+ +RL + + KNG A IVIGTRSA+F P Sbjct: 328 PEIGLTPQILRRFRSLFGERVAVIHSGLSQGQRLDEYKRIKNGSADIVIGTRSAVFAPLD 387 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 N+G+I++DEE + SYK RY D+A +R + ++L SATP++E+ ++ Y Sbjct: 388 NIGIIIVDEEGERSYKSDSSPRYMTHDIARHRCGYHKAVLLLASATPSVESYYLAEKGVY 447 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRG 429 RLL + +R + ++D+ ++ + L + ++L Q IL LNRRG Sbjct: 448 RLLEMNKRYSTSPLPEVSIVDMNLEREDGNRTEFSRKLAEELSRNLANGEQSILLLNRRG 507 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGL 489 + + C DC CP C T H+ L CH+C CPSCGS L +G Sbjct: 508 YHTVISCCDCYQPVYCPNCSVPLTYHKKNDKLMCHYCGYVSERITVCPSCGSERLRNMGF 567 Query: 490 GTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFP 549 GT++LE+ LA FP + R+D DTT + + E+ A+ G I+IGTQM+ KG FP Sbjct: 568 GTQKLEEELAVYFPQARVLRMDADTTFSRYSYEKNFADFRDGKYDIMIGTQMIGKGLDFP 627 Query: 550 DVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL 609 DVTLV +L VD ALF+ DFRS ER L TQV GR+GR +QG +LQT PEH ++ Sbjct: 628 DVTLVGVLSVDKALFAGDFRSYERTFSLITQVVGRSGRGERQGRAILQTFMPEHYIMNLA 687 Query: 610 LYKGYDAFAEQALAERRMMQLPPWTSHVI--------VRAEDHNNQHAPLFLQQLRNLIL 661 + Y F + +A RR M PP + V + + L ++L + Sbjct: 688 AAQDYKGFYNEEIAIRRAMIFPPVCDMAVFCFAANDEVSVQKGADAVLALMKEKLDRMQP 747 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 +P + VLGPV A + G++R++I+++ + ++ I+ L + D + V Sbjct: 748 KTP-----IRVLGPVRASYGRINGKFRYRIIMKCKNNAEIRGFISSLLTEAADLKDMKGV 802 Query: 722 KWVLDVD 728 D++ Sbjct: 803 SLYADMN 809 Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 4/87 (4%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 F Y +P+ + K GCRV VPFG+ + RIG+++ +S S +LKA+V +D EPV + Sbjct: 20 FSYSVPDNIKAKVGCRVLVPFGRGNKRRIGVIMKLSQNSG---KKLKAIVSQVDDEPVVS 76 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALP 101 + +L L+ + + D + LP Sbjct: 77 DELLQLALYLRENTYCTYYDAVRIMLP 103 >UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK8_9FIRM Length = 791 Score = 360 bits (924), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 221/630 (35%), Positives = 333/630 (52%), Gaps = 29/630 (4%) Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL---EFNDAALQALRK 170 P+ W A + S+KR +Q+ + L Q I +D +++L F+ ++ + Sbjct: 178 PLEEWLAINNKSESE--SMKRGGRQKALWSHLCQ--IGQDSISSLISAGFSRDVIRRFCR 233 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGS 228 G L + N R +L EQ AV I A + + LL GVTGS Sbjct: 234 NGNGHLFYRGKKTFSLVENKKSDNPR-KLTAEQKYAVEYIIGAVNEERYKGILLYGVTGS 292 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVYL E+ +A G L+ VPEI LT Q ++ F + F V +HS L+ ER + Sbjct: 293 GKTEVYLRAAESAIAAGGTVLLEVPEIALTNQMVSYFADYFGDKVVFMHSNLSKGERYNN 352 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 + N E++I+IG+RSALF PFKNL +I++DEE+DSSYKQ E RY+ RD+A A Sbjct: 353 RQRIANEESSIIIGSRSALFMPFKNLKLIIVDEEYDSSYKQTETPRYNGRDVAKVMAVIY 412 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV---QAGLAP 405 PI+LG+ATP++ T + KK LL + +R +V D++ + L+ Sbjct: 413 NCPIVLGAATPSVTTFFAAKNKKIELLEMRQRVHRTPLPQIYVYDMRSEADIGHATNLSR 472 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 +I +R +Q +++ IL LNRRGFAP L+C CG++ +C CD H+ +H L CH+ Sbjct: 473 PMIDLLRDTVQKNHKAILLLNRRGFAPTLMCKHCGYVFKCTHCDVPLVYHKDKHRLNCHY 532 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C+S P+PRQCP C S ++ +G GT+++E+ L L P R D D+T+RK + + L Sbjct: 533 CESIFPLPRQCPVCSSQDILYLGWGTQRIEEDLKKLLPEAKCCRFDVDSTARKYSAAKIL 592 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + G IL GTQM+AKGH P V V +L VD L + +AE+ L TQ AGRA Sbjct: 593 SNFRDGKFDILFGTQMVAKGHDIPGVQSVGILSVDSTLNMPTYLAAEQTFNLITQCAGRA 652 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV----RA 641 GR +QG V+LQT++ EH ++ T + YDAF +Q L RR + PP+T + + + Sbjct: 653 GRNLEQGRVILQTYNTEHYVILTAAKQDYDAFYQQELEYRRTLHYPPFTRLMKITCFNKK 712 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 E HA + +R ++ P + + V P K + +L++ + RL Sbjct: 713 ESIARNHAEKIYRYIREMLPGIP---DYISVTPPYDEPVKKVRNIYNVSLLIKGKTLRRL 769 Query: 702 Q-HIINGTLALINTIPDSRKVKWVLDVDPI 730 + + N + N I ++DVDP+ Sbjct: 770 KLSMQNSKIFQENDI--------IIDVDPL 791 Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust. Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 5/88 (5%) Query: 12 LPRTFDYLLPEGMT-VKAGCRVRVPF-GKQQERIGIVVSVSDASELPLN-ELKAVVEVLD 68 L +TF Y +P+ ++ V +G R VPF GKQ+E GI++S + ++ +L + + +D Sbjct: 17 LNKTFSYKIPDHLSYVGSGWRCIVPFAGKQEE--GIILSCHEEEFSHISYKLLEIYDAID 74 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVL 96 S P FT ++ + W + YY + D L Sbjct: 75 SVPWFTDAMIKTAKWISQYYMCTLIDAL 102 >UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=PRIA_RICBR Length = 648 Score = 360 bits (923), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 202/536 (37%), Positives = 303/536 (56%), Gaps = 18/536 (3%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 L+ EQ A+ ++ D+ L+ GVTGSGKTEVY ++ LA+GKQALVM+PEI L+ Sbjct: 122 LSEEQKQALQMLN---DSNKPILIKGVTGSGKTEVYFYLIAEYLAKGKQALVMLPEIALS 178 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 Q I RF+ERF + +S + +++ + IVIG RS+LF PFKNLG+IV Sbjct: 179 TQIINRFKERFGFDPIIWNSSVTKAQKKMILRGILEDKVKIVIGARSSLFLPFKNLGLIV 238 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLT 378 IDEEHD SYKQ +G Y+ARD A+ R+ ++ I+L SATP++ET+ N KY ++ L+ Sbjct: 239 IDEEHDDSYKQDDGVLYNARDTAIVRSTFDKAQIVLCSATPSIETMYNANIGKYSVINLS 298 Query: 379 RRAGNARPAIQHVLDLKGQKV--QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 R NA ++D+ +++ L+ LI ++ +L+ Q +LFLNRRG+AP +LC Sbjct: 299 SRYKNAVLPNIEMIDMTKEELPKNCYLSNILIKAIKNNLENKEQTLLFLNRRGYAPLMLC 358 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC-GSTHLVPVGLGTEQLE 495 CG C C + +H++ L CHHC Q + CP C L G G E++E Sbjct: 359 KSCGHKFTCKYCSSWMVVHKSSKKLECHHCGYQSKIFNSCPECLEDESLAICGPGIERIE 418 Query: 496 QTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 + LFP I+ I +D + Q L ++ ILIGTQM+ KG+HFP++TLV Sbjct: 419 EEAKTLFPNSKIAVISKDHVKNPEKIAQLLHQMENLEIDILIGTQMITKGYHFPNLTLVG 478 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYD 615 ++D D AD RS+ER QL QV GRAGR +G V LQ+++P++ + + + D Sbjct: 479 VVDADLGSNHADLRSSERAFQLLHQVGGRAGRGNSKGMVYLQSYYPDNIIFSYIKDERED 538 Query: 616 AFAEQALAERRMMQLPPWT--SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 F L R+ +PP++ + VI+ N+H L+ +N++ +P A K +L Sbjct: 539 NFFVNELEVRKAADMPPFSKMASVILSG---TNEHK--ILEVAKNMVRIAPEAQVK--IL 591 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 GP +L K G++R++IL+ + LQ + L LI IP +K +D+DP Sbjct: 592 GPASSLMSKLAGKYRFRILIIADKKFNLQKYLKFWLELIK-IPSFCHIK--IDIDP 644 Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M +A + L DYL+PE +++ G V VPF + +E GIV S+ E + +L Sbjct: 1 MQIAKILLSAVKLFPLDYLIPEDLSLNIGDLVVVPF-RNKELTGIVWEFSNVPE--VKKL 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI 102 K + E + T V L+ W ++YY +G + LP+ Sbjct: 58 KTIKEKVPLNLTITSEVLDLIKWMSNYYMAELGSIAKLVLPV 99 >UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGW7_9DELT Length = 857 Score = 359 bits (921), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 234/554 (42%), Positives = 307/554 (55%), Gaps = 25/554 (4%) Query: 197 LRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPE 254 L L +Q A+ + +A A F++ LL G+TGSGKTEVYL ++ +V+ G A+V+VPE Sbjct: 304 LTLTGDQRRALEGLRAAFEAGRFASALLHGITGSGKTEVYLRLIASVIEAGGGAIVLVPE 363 Query: 255 IGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNL 314 I LTPQ RFR RF V VLHSGL +RL AW + GE IVIG RSA+F P L Sbjct: 364 IALTPQLAQRFRARFGDAVAVLHSGLTAQQRLDAWEHIRAGERPIVIGARSAIFAPVPKL 423 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 VIV+DEEHD S+KQ+EG RY+ARD+A+ R S ++LGSATP+LE+ N ++ + L Sbjct: 424 RVIVVDEEHDGSFKQEEGVRYNARDVALVRGRSLDAVVVLGSATPSLESWRNAREGRLAL 483 Query: 375 LRLTRRAGNARPAIQ-HVLDLKGQ--KVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 LT R RP + V++L+ + L+ L R+ A Q ILFLNRRG+ Sbjct: 484 WSLTTRP-TPRPLPEVEVVNLREHLPDPETLLSARLRQRLLDTANAGEQSILFLNRRGYT 542 Query: 432 PALLCHDCGWIAECPRCDH-YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 AL C CG +CP C T H ++ L CH C P C SCGST L G Sbjct: 543 TALSCKTCGSFQQCPDCSAPSMTYHLHRNRLMCHLCGHIEAAPSHCLSCGSTELEHGAAG 602 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 TE++E +A PGV + R+DRD TSR AL + L R A +LIGTQML+KGH FP Sbjct: 603 TERVEVAIAAALPGVRMLRLDRD-TSRGKALLELLGRFRRREADVLIGTQMLSKGHDFPG 661 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +L D L DFR+ ER QL TQVAGRAGR + G VV+QT P+HP ++ Sbjct: 662 VTLVGVLRADHGLGLPDFRATERVFQLLTQVAGRAGRGDRPGRVVVQTWAPDHPAIRYAR 721 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIV-------RAEDHNNQHAPLFLQQL-RNLIL- 661 ++ FAE L R PP +V RA D Q F + L R ++L Sbjct: 722 THDFEGFAEHELEARAKSGNPPIGHLALVRIHGTDRRAVDARAQAVADFARALGRRIVLA 781 Query: 662 ---SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 S+ A + +LGPV + + R R Q+LL+ SR L+ I++ + PD Sbjct: 782 AGASATPASAPVEILGPVDSPIERINKRHRMQVLLRARSRRPLRWILDHLRHRLG--PDG 839 Query: 719 RKVKWV---LDVDP 729 R +DVDP Sbjct: 840 RGRSQTVARVDVDP 853 Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 10/97 (10%) Query: 12 LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE----LKAVVEV 66 L R F YL+PE M T +AG RV VPFG R+ + V +E ++ L+ ++E Sbjct: 3 LDRGFTYLVPEDMATPEAGARVLVPFGA---RVLVGVVREAKAEFGPDDDPAKLRELLER 59 Query: 67 LD--SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 +D P + + RL W A+YY P+G+V ALP Sbjct: 60 VDPPGRPALSLDLVRLCEWIAEYYVAPVGEVYRMALP 96 >UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID=C9KIM0_9FIRM Length = 828 Score = 358 bits (918), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 211/573 (36%), Positives = 320/573 (55%), Gaps = 10/573 (1%) Query: 129 LNSLKRSPKQQQALAALRQG-KIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 L+S +R Q L L+Q ++ + + A + L GL ++ +R Sbjct: 227 LDSYRRKKAQAHLLELLQQTPEVPLAALKAQHVSLATVHNLEAAGLAEIRQRRVLRDSYR 286 Query: 188 TNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 A S E + L +Q V ++ A D + +LL GVTGSGKT+VY+ + E V A G Sbjct: 287 DARA-SKEEVALTEDQQQVVAQVYPAIDAARYQGFLLKGVTGSGKTQVYIELAERVRAAG 345 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 ++ +V+VPEI LT Q + F+ F + V+HS L+ +ER A L+ + EA I+IG RS Sbjct: 346 RRVIVLVPEIALTGQVVMAFKSYFPDDLVVVHSRLSLAERNDAILRVRRNEAGIIIGARS 405 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALFTP ++G++++DEE D SYKQ E RYHAR +A A ++LGSATP+LE+ Sbjct: 406 ALFTPADDIGLVILDEEQDMSYKQDESPRYHARVVAEKIARVHGAVLLLGSATPSLESYF 465 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQV 421 Q + LL + RR G+ + H +D++ Q+++ G ++ AL + + + QV Sbjct: 466 RAAQGELTLLVMPRRIGDIPLPVIHCVDMR-QELRMGNRHIISRALQELIEKTIARHQQV 524 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 I+ LNRRGF+ ++C CG + C C H+ L+CHHCD Q PVP CP CGS Sbjct: 525 IIMLNRRGFSTFVMCRSCGEVIRCRHCGLPLVYHR-NGQLKCHHCDVQEPVPDVCPKCGS 583 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 ++ G GTE+LEQ LA L P + R+DRDTT+ K A ++ L RG IL+GTQM Sbjct: 584 RYIKYFGSGTEKLEQELAALVPSARVIRMDRDTTTTKFAHQEILESFRRGEYDILLGTQM 643 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 +AKGH P+VT V ++ D +L DFR+AER L TQ AGRAGR +G+VV+QT++P Sbjct: 644 VAKGHDIPNVTAVGIISADSSLNMPDFRAAERCFMLITQTAGRAGRHETRGQVVIQTYNP 703 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 H + + + Y+ F + +A R+ + PP++ V + ++ + A + L Sbjct: 704 THYAVTCGIRQDYEGFFHKEIALRQELFYPPYSRLVKLLYQNASEVKAKAEAEALVKSFE 763 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + E V+GP PA+ G +R+ +L++ Sbjct: 764 LAFAGREGHQVIGPAPAVIACFRGIYRFVVLIK 796 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 6/106 (5%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A V + +P + R + Y +PE ++ ++AG RV VPFG ++ G VV + + P Sbjct: 24 MKTADVFVNIPVKSIARAYTYRVPEELSKIEAGWRVFVPFGSRKVE-GFVVETHELAAAP 82 Query: 57 LN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 N LK V+ +D E F+ + + W +D+Y + +++ +P Sbjct: 83 ENITLKDVIAAVDEECWFSPQMIEIARWLSDFYLCSLAEIMRLFMP 128 >UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW75_ALIAD Length = 805 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 201/482 (41%), Positives = 284/482 (58%), Gaps = 10/482 (2%) Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL GVTGSGKTEVY+ ++ + QALV+VPEI LTPQ + RF RF V VLHSGL Sbjct: 289 LLHGVTGSGKTEVYMHLIRGAIEDEGQALVLVPEIALTPQLVQRFERRFGGRVAVLHSGL 348 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDL 340 + ER W + GEA++VIG RSA+F P + L ++VIDEEH+ SYKQ++ Y AR++ Sbjct: 349 SLGERREEWTRVLEGEASVVIGARSAVFAPMRKLRLVVIDEEHEPSYKQEDAPHYDAREV 408 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARP-AIQHVLDLKGQKV 399 A++RA ++LGSATP+L ++ V++ RL+ L RA N RP V+D++ +++ Sbjct: 409 AMWRAREAGALVVLGSATPSLASMFRVERGDARLVSLPVRA-NRRPLPPVDVIDMR-EEL 466 Query: 400 QAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 +AG + L + + + Q ILFLNRRG+A A LC CG ECPRCD + T+H Sbjct: 467 RAGNRSIFSRRLAAELERTVSEGMQAILFLNRRGYAHAALCRACGHSMECPRCDIHLTVH 526 Query: 456 QAQ--HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 + H L CH+C + P+ R+CP+C LVP GLGTEQ+EQ L +P + + R+D D Sbjct: 527 RRADGHVLVCHYCGHEEPLVRRCPACAEDALVPYGLGTEQVEQHLLRTWPAMRVLRMDLD 586 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 TT RKGALE + RG A +L+GTQM+AKG FP V LV ++ D L D+R+ ER Sbjct: 587 TTRRKGALESIIDRFQRGEADVLVGTQMIAKGLDFPRVRLVGVVAADAMLTLPDYRANER 646 Query: 574 FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW 633 QL TQVAGRAGRA G ++QT+ P H ++ Y F E+ R + PP+ Sbjct: 647 AFQLLTQVAGRAGRAETDGITLIQTYQPGHRAIEAAKSHDYRQFYERERESREFFRYPPF 706 Query: 634 TSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 + A + A + + SP A L VL P+ + +R+Q+++ Sbjct: 707 CELAVFLASHSEERLARGAAARFERELARSPSA-ASLTVLPAGPSGIRRIDNVYRYQVVM 765 Query: 694 QH 695 ++ Sbjct: 766 KY 767 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 L + FDY++P GM V G RV VP + R GIV +V + + + L+ + V+D P Sbjct: 20 LDKRFDYIVPPGMDVSPGVRVVVPM-RDSVRSGIVWAVREVAN--VGGLRPLARVIDRVP 76 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-----RPAANAPM 115 V T R+ W D Y + + + LP R P+A+AP+ Sbjct: 77 VLTPHQMRMAEWLCDRYAATLPEAVSAILPGAFRVRVRKVIVPSADAPV 125 >UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM71_9FIRM Length = 755 Score = 357 bits (917), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 251/750 (33%), Positives = 375/750 (50%), Gaps = 53/750 (7%) Query: 14 RTFDYLLPEGMTVKA--GCRVRVPFGK-QQERIGIVVSVS--DASELPLNELKAVVEVLD 68 + + Y +P+ + + G V VPFG+ + R+ +V+ V DA P LK + + Sbjct: 19 KLYSYRIPDALLGRVWPGSMVLVPFGRGDKPRMAVVLRVEELDAGAAP-KRLKMLHDAAP 77 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVD 128 + T + L+ + D F A+ ++ G Y A G+ V Sbjct: 78 EQTRLTPDLLELVHFLKDRTFC----TWFEAVKAVIPYG-------AQYRAAVVDGKPVM 126 Query: 129 LNSLKRS------------------PKQQQALAALRQGKIWRDQVATLEFNDAALQALRK 170 + L RS P+Q+ A+ ALR+G + Q+ + + L L + Sbjct: 127 QSRLSRSTERVYTLTGELPQKPKPGPRQKAAVEALRKGPLTAHQLDEVGISKTTLDTLCE 186 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGS 228 KG+ +A + D + + + L EQ A A+ + A LL GVTGS Sbjct: 187 KGVLSVAEQDKAL-DLFADIPYEPQPITLAPEQQRAFAALAPDLEDGKPHAALLHGVTGS 245 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKT V+L ++E L G++A+V+VPEI LTPQ I R + F + + V HS LN++ERL Sbjct: 246 GKTIVFLKLIERTLELGRKAIVLVPEISLTPQMIRRLKSTFGSRLAVQHSALNNTERLLQ 305 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + G A IV+GTRSA+F P +N+G+I++DEE + +Y+ + RY A D+A RA E Sbjct: 306 WRLIQQGHADIVVGTRSAIFAPLQNIGLIIMDEEQEHTYQSESAPRYDAHDVAKKRAAME 365 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAGLAPAL 407 ++ SATP ET + KY+LL LT+R G RP Q +D++ + + AG + Sbjct: 366 NSLLVFASATPMTETYHAAESGKYKLLTLTQRYG-GRPLPQVDFIDMRAE-LAAGNPREV 423 Query: 408 ITRMRQHLQAD----NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 TRM + LQ + Q IL LNRRG+ +C CG + +CP C H+ Q L C Sbjct: 424 STRMIRELQENLENGEQSILLLNRRGYHTVAMCASCGHVLKCPNCSVPLVYHKPQQALMC 483 Query: 464 HHCDS-QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 HHC RP+P+ CP CG L G GT+++E+ LA L PG I R+D+D+T++K A E Sbjct: 484 HHCGHIVRPLPQLCPECGG-KLNYSGFGTQRVEEELAELLPGARILRMDQDSTNQKNAHE 542 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 LA+ R IL+GTQM+AKG F VTLV +L +D LF FR+ E L TQV Sbjct: 543 TMLAQFGRQEYDILLGTQMVAKGLDFEKVTLVGVLGIDSLLFGQGFRAYESVFSLVTQVI 602 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV--- 639 GR GRA G ++QT P HP+LQ + Y+AF + +A R+ PP+ + +V Sbjct: 603 GRGGRAALPGRALIQTTVPNHPVLQLAAAQDYEAFYREEIAFRKFGLYPPFCAFCVVGFV 662 Query: 640 -RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 AE A F L P L +LGP P G++R+++ L+ + Sbjct: 663 GAAEGTVAMAAHRFGTLLAERAAQHP--QIPLRLLGPAPMGITMLNGKYRYKLTLKCRNN 720 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ TL +K +LD + Sbjct: 721 AAFRSLLQETLDAYAQEKLPQKASVILDFN 750 >UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Possible helicase) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RW4_CYTH3 Length = 815 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 217/635 (34%), Positives = 330/635 (51%), Gaps = 34/635 (5%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQG------------KIWRDQVATLEFNDAALQ 166 + T A + L + P+QQ+ L Q I + + ++LQ Sbjct: 188 YTTPHALANLMQELDKKPRQQEVLMRYLQEVPVIQTPGANIPGIEKTFFTASGLSTSSLQ 247 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVT 226 L K + + E +R + S + L+ +Q A +I DT + LL GVT Sbjct: 248 TLIKNKVFEAFEEVISRLSYRADEKKSV--VELSEQQEAAKESILLQLDTKDSVLLHGVT 305 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTE+Y+ +++ + G QAL+++PEI LT Q + R E F + V HS +D+ER+ Sbjct: 306 GSGKTEIYIDLIKRSIDNGSQALLLLPEIALTTQIVQRLEEYFGDRMGVYHSKFSDNERV 365 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRA 345 W + G ++G RS++F PF +LG+I+IDEEH++SYKQQ+ RY+ RD A+ A Sbjct: 366 EVWRGLQEGRYDFIVGVRSSVFLPFTHLGLIIIDEEHEASYKQQDPAPRYNGRDAALMLA 425 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHV---LDLKGQKVQA 401 +LGSATP++E+ + ++ + L R GN P I+ ++ K + VQ Sbjct: 426 RIHNAKTVLGSATPSIESRDAALKNRWGYVPLLNRYGNVSLPEIRLADMRVERKNKTVQQ 485 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 G + L++ +R+ + QVI+F NRRG+AP L C DCG I C C T HQ H L Sbjct: 486 GFSLTLLSAIRETIANKKQVIIFQNRRGYAPMLECEDCGNIPMCTSCSVSLTYHQFSHEL 545 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 RCH+C R VP++C SC S L VG GTE++E L L P I R+D DTT +K + Sbjct: 546 RCHYCGFTRKVPQKCDSCSSHRLKTVGSGTERIEDELQILLPEARIRRMDLDTTRKKNSF 605 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + + + ILIGTQM+ KG F +V LV + D D L+ DFR+ ER Q+ QV Sbjct: 606 AELITAFSQHEIDILIGTQMVTKGLDFANVELVGVYDADRMLYFPDFRAIERTYQMIVQV 665 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIV 639 +GRAGR +G+V++QT PEHP+ + YD F + L ER M PP+T +H+ V Sbjct: 666 SGRAGRKSGEGKVIIQTAQPEHPVFAFIKNNDYDGFFTRELYEREMYHYPPFTRVTHISV 725 Query: 640 RAEDHNN--QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 D + A +L++ I S +LGP A K + ++ ++ Sbjct: 726 LHLDKKEALKTAHGLTAKLKDAIGSK-------RILGPQVASIEKLRNYYHIELFIKLEK 778 Query: 698 RVR-LQHIINGTLALI---NTIPDSRKVKWVLDVD 728 ++ LQ I N +++ +T+ K + ++D D Sbjct: 779 DIKGLQSIKNKIASIVQNEHTLHIGSKGRIIIDTD 813 Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 12/155 (7%) Query: 6 VALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 + LP+PLP+ F Y +P+ + TV AGCR+ VPFG+++ G+V S+ + + K + Sbjct: 1 MVLPLPLPQLFTYKIPDQLVDTVSAGCRIIVPFGQRKFVTGVVRSIHQHAPASY-QTKEL 59 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 ++VLD P ++ + W A+YY G+VL ALP G ++ M Q Sbjct: 60 IDVLDVTPTMNAYQFKFMDWMAEYYLCAPGEVLQAALP----SGFKLSSESMIQLNPLFQ 115 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL 158 +VDL + K+++ + LR + ++ L Sbjct: 116 EASVDL-----TEKERRIIQELRSNTLSYKDISKL 145 >UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GMK1_9FUSO Length = 734 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 215/708 (30%), Positives = 367/708 (51%), Gaps = 27/708 (3%) Query: 39 QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT--HSVWRLLLWAADYYHHPIGDVL 96 + ++ +V+S +EL ++ K + + D PV + + L+ W DYY V+ Sbjct: 35 NRNKMALVLSEISETELTIDTAK-IKFISDKAPVLSVPSVIMELVKWIKDYYLSDYNSVI 93 Query: 97 FHALP--ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ 154 A P + L + A ++ S K S ++ +++ K Q Sbjct: 94 KAAYPGALKLNYSKKAVYVKDLEIKEKKEKLFEKEESGK-SESIEKFNEYMKKKKEVTFQ 152 Query: 155 VATLEFNDAAL-QALRKKGLCDLASETPEFSDWRTNYAVSGERLR----LNTEQATAVGA 209 F++ + +A+R+K + + S + N + E L+ LN EQ AV Sbjct: 153 TLQKNFSEKIINKAIREKAVTIEKKIITK-SKIKENTELKSEILKDSVVLNDEQQKAVNR 211 Query: 210 IHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF 269 I + + F +L+ GVTGSGKTE+Y+++++N + + ++ +VPEI LTPQ I R +F Sbjct: 212 IENGNNKF--YLIKGVTGSGKTEIYVNLIKNAMKENCGSIFLVPEISLTPQMIERLERQF 269 Query: 270 NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ 329 + V VLHS L D E+ + W + GE IVIG RSA+F P +NL I+IDEEH+++YKQ Sbjct: 270 SGSVAVLHSKLTDVEKRAEWSFIRRGEKKIVIGARSAIFAPVENLKYIIIDEEHENTYKQ 329 Query: 330 QEGWRYHARDLAVYRAH-SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAI 388 RYH ++ A+ RA E + +I GSATP+ E+ ++ L+ L R NA+ Sbjct: 330 DTNPRYHVKNAAIKRALIEENVKVIFGSATPSFESYYQAKKGDLELIELKERFNNAKIPE 389 Query: 389 QHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRC 448 V+DL + + L+ + L QV+L LNR+ F+ L C +CG I CP C Sbjct: 390 YKVVDL--NETPNNFSDELLKEISNTLAKKEQVLLVLNRKAFSNLLKCKECGNIPTCPNC 447 Query: 449 DHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 + ++ + L+C +C + ++C SCGS ++ +G GTE++E+ L +F I Sbjct: 448 SISLSYYKYDNKLKCSYCGYEERFDKKCKSCGSDKMIQIGSGTEKIEEELKEIFYDGKIV 507 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 RID ++ K E + I++GTQ++AKG HFP+VTLV +++ D L DF Sbjct: 508 RIDSESVKTKKDYENLYNDFKNQKYNIMLGTQIIAKGFHFPNVTLVGIVNSDIILNFPDF 567 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 R+AE+ QL Q AGRAGR K+G+V++QT + E+ +++ + Y+ + E+ + R+++ Sbjct: 568 RAAEKTFQLLVQSAGRAGREEKEGQVIIQTFNKENEVIKKTVENDYEGYFEKEMEIRKLL 627 Query: 629 QLPPWTSH-VIVRAEDHNN---QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRG 684 PP+ +IV + D N + +F ++ + + ++ ++ P A K Sbjct: 628 NYPPYGRLIIIVLSSDEENGLEEKVKIFYNKIMSSVKRKIQPEKNEFISEPFKAPIYKIN 687 Query: 685 GRWRWQILLQHPSR--VRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 R+R+QI ++ ++++II TL N + ++ +DVDP+ Sbjct: 688 TRYRYQIFIKFNRNNITKIKNIIRATLNDYN----EKNMRISVDVDPV 731 >UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MNQ4_CRYCD Length = 786 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 268/797 (33%), Positives = 396/797 (49%), Gaps = 91/797 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A V L +P L ++ Y + ++ G V VPFG + +G V+ + L Sbjct: 9 MKFAQVVLDIPTQALEGSYVYAAHSDLGDIEVGSPVLVPFGGRSA-VGFVMKM-----LS 62 Query: 57 LNEL--KAVVEVLDSEPVFTHSVWRLL-------------LWAADYYHHPIGDV--LFH- 98 L+EL +AV E L + + RLL + A +Y P+ LF Sbjct: 63 LDELAPEAVEEALGCDSHKVKPITRLLGRSLFPRESAACAQFLAQHYIAPLASCVRLFTP 122 Query: 99 --ALPILLRQGRPAANAPMWYWFATEQGQAVD-----------LNSLKRSPKQQQALAAL 145 +P ++ GR WY G+ D + K++ KQ+ +AAL Sbjct: 123 PGGVPRMV-HGRDG-----WYLRDASVGKVDDRWVRLAVGAREFHPRKQAVKQRAIIAAL 176 Query: 146 RQGKIWRDQVATL--EFND--AALQALRKKGLCDLASETPEFSDWRTNYAVSG------- 194 G++ +VA L E+ A L++L KG+ ++ S +N SG Sbjct: 177 DAGEL---RVADLRAEYGSVSATLRSLATKGVIEIFSRRRMRGTSVSNTPTSGCDYGLCT 233 Query: 195 ----ERLRLNTEQATAVGAIHSAADTFSAW--LLAGVTGSGKTEVYLSVLENVLAQGKQA 248 + L Q AV AI A S L+ GVTGSGKTEVYL +E V+ G+ A Sbjct: 234 LDAAHKPHLTPGQQRAVAAISKAFQAHSGQVVLVDGVTGSGKTEVYLRAIEEVVRSGRSA 293 Query: 249 LVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALF 308 +V+VPEI LTPQT+ARFR RF V VLHS + ER W ++GEA +++G RSALF Sbjct: 294 IVLVPEISLTPQTVARFRGRFGDMVAVLHSRMGTGERFDQWDFIRSGEARVIVGARSALF 353 Query: 309 TPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQ 368 P +LG+IVIDEEH++SYKQ RY RD+A + A ++LGSATP++E + VQ Sbjct: 354 APVADLGLIVIDEEHEASYKQDSAPRYVTRDVAAWMARERGAALVLGSATPSIEAIFRVQ 413 Query: 369 QK-KYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITR----MRQHLQADNQVI 422 + + L RA G P+I+ V+D+ + AG R +R+ L A N+ + Sbjct: 414 HDPTWTAVELPERANGKPLPSIE-VVDM-AHEFSAGSRSMFSHRLQQALRETLTAGNKAV 471 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 L LN+RGFA +LC CG++ +CP C T H+ + L CHHC P CP CGS Sbjct: 472 LMLNQRGFAQFVLCRACGFVPQCPSCSTSLTFHEKGNVLMCHHCGFHMTTPAVCPQCGSP 531 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVP-----ISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 +L G GT+++E LA + G I R+D DTT+RKGA ++ L E A +L+ Sbjct: 532 YLKRFGAGTQRVEAELASILAGFSDVDAHIVRMDADTTARKGAHQKLLEEFAAADAAVLL 591 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG F DVTLV +++ D L DFRSAER L QVAGR+GRA G V++Q Sbjct: 592 GTQMIAKGLDFDDVTLVGVINADTQLRLPDFRSAERTFDLIEQVAGRSGRAQLPGRVIVQ 651 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIV--RAEDHNNQHAPLFL 653 T+ +Q + ++ L R+ + PP+ + V+V R E + A Sbjct: 652 TYSATSIAIQAAAHYDRTSWLNHELESRKSLGYPPFVRLADVLVWGRDEAAVRREAGELY 711 Query: 654 QQLRNLILSSPLADEKLW-VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 +++ + I D W +L P P + + G WR+ I ++ P+ + ++ + Sbjct: 712 RRMTDAIDEHTQGD---WTILAPTPCVLSRLRGSWRYHITVKAPATADIARVLT---PVF 765 Query: 713 NTIPDSRKVKWVLDVDP 729 + ++ +D+DP Sbjct: 766 RSRRAMHELSVAVDIDP 782 >UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0K0_UNCTG Length = 661 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 189/511 (36%), Positives = 292/511 (57%), Gaps = 18/511 (3%) Query: 195 ERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 ER LN +Q+ AV I+ + ++A+LL GVT SGKTEVY+ +E VL Q + A++++ Sbjct: 124 ERHILNAQQSNAVNLINESLGKKVYNAFLLYGVTASGKTEVYIKAVEYVLKQNRSAIMLI 183 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI L Q + +RF A + V HSG+++ E+ S + KAKNG I+IG RSA+F PFK Sbjct: 184 PEISLAIQFVDIMTKRFGASIGVWHSGISNIEKYSLFSKAKNGSIKIMIGARSAVFAPFK 243 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NLG+I++DEEH+ +YKQ++ Y R++A R ++LGSATP+LE+ + + + Sbjct: 244 NLGLIIVDEEHEHTYKQEQKPSYDTREIAKRRGVYHNAVVVLGSATPSLESYKDALENRL 303 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA-PALITRMRQHLQADNQVILFLNRRGFA 431 L+ L R VL L+ + +AGL P I M + L Q+I+FLNRRG++ Sbjct: 304 NLIELNERICKKELPEVKVLTLRDRIFKAGLLLPETIEAMSKALARKEQIIVFLNRRGYS 363 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P ++C CG + +C +C H+ L+CH+C + +P C C S + G GT Sbjct: 364 PTIMCRKCGIVYQCSKCSVSMVFHRNPELLKCHYCGLTKNLPVACSVCKSRDIAVFGAGT 423 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR----ILIGTQMLAKGHH 547 +++E L LF I R+DRDT S E+ +V+RG ILIGTQM+AKG Sbjct: 424 QKVEDELKKLFKTAKIFRLDRDTASS----EENYEKVYRGIKNEEYDILIGTQMIAKGFD 479 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQ 607 FP V+L +++ D +L+ F+S E+ QL TQVAGR+GR +G V++QT+HP+H ++ Sbjct: 480 FPRVSLACVVNADTSLYLPGFKSVEKTFQLITQVAGRSGRRDMRGSVIVQTNHPQHYAIE 539 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPW--TSHVIVRAEDHN--NQHAPLFLQQLRNLILSS 663 + +F + + ER+ + PP+ + + +R ++ + + L N I S Sbjct: 540 YAKNHDFVSFYKTEIEERKKLFYPPYCDVAKISIRNKEEKKADDDSEKLFSLLENSIKSY 599 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 L L +LGPVPA K +R I+++ Sbjct: 600 KLG---LKLLGPVPAYIAKLNNVYRQHIIIK 627 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERI--GIVVSVSDASELP 56 M V LPVPL + F YL PE M ++ G RV+V FGK RI +S + Sbjct: 1 MIVLESVLPVPLNKIFYYLPPENMNPESIVGKRVKVQFGK---RILTAYAISCRNVESDS 57 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +LK +++++D + + T + + + Y +G+ L +P+ ++ Sbjct: 58 GLKLKRIIKIIDDDSLITGETMEIADYISKNYVCSLGEALASIIPVSMK 106 >UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS5_9BACE Length = 839 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 203/546 (37%), Positives = 306/546 (56%), Gaps = 18/546 (3%) Query: 199 LNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 LN EQ A I AA +A LL GVTGSGKT+VY+ +++ L +G+ A+V+VPEI Sbjct: 299 LNEEQTAAFEGIDKLCAAGKSAAALLYGVTGSGKTQVYIRLIQETLKRGRSAMVLVPEIA 358 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LTPQ + F F + VLHS L ER W + + G+A +VIGTRSA+F P +NLG+ Sbjct: 359 LTPQLLHIFTSHFGDAIAVLHSSLRTGERYDEWKRVRAGKARVVIGTRSAVFAPLQNLGL 418 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 IV+DEE + +YK + RYHARD+A +R ++LGSATP++E++ + Y L Sbjct: 419 IVLDEEQEYTYKSENVPRYHARDVAKFRCARSGGVLLLGSATPSVESMYLAKTGVYHLFT 478 Query: 377 L-TRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD----NQVILFLNRRGFA 431 L +R A P ++ ++D+K ++++ G + ++R+ L+A+ Q ILFLNRRG + Sbjct: 479 LRSRYNTRALPQVR-IVDMK-RELRGGNGSDISQQLREELKANLERGEQSILFLNRRGNS 536 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC-GSTHLVPVGLG 490 C +CG + CPRC Y T H A L CH+C +P CP C GS H +G G Sbjct: 537 RMAACGECGEVPSCPRCTVYLTYHSANGRLMCHYCGHSERLPDACPHCGGSFHF--IGTG 594 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 T+++++ L LFPG + R+D DT S + E+ L+ + IL+GTQM+AKG F + Sbjct: 595 TQKVQEELEALFPGSEVMRMDTDTVSAVQSHEKLLSRFEKEKVPILVGTQMVAKGLDFEN 654 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV ++ D +L+ D+R+ ER L TQV GRAGR K G ++QT PE+ ++ T Sbjct: 655 VTLVGVISADLSLYVDDYRAGERTFSLLTQVVGRAGRGEKTGRAIIQTFTPENEVITTAA 714 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE-- 668 + YD F +Q + RR+ PP+ ++ A +LR L S AD Sbjct: 715 TQDYDTFYQQEITMRRVRGCPPFRDLFVLTASGTEESRVLRMCVRLRR-TLESWFADPAY 773 Query: 669 ---KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 + +LGP PA K R+R+++ + + ++ ++ L + + R V Sbjct: 774 QGLDVQLLGPAPASVAKVNNRYRYRLTISGHNSKTMRALVAALLCAAHNDKEMRGVSVFA 833 Query: 726 DVDPIE 731 DVDP++ Sbjct: 834 DVDPMD 839 Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERI-GIVVSVSDASELPLNE 59 VA A + + +DYLLP+ + A G RV +PFG RI GI++++ + Sbjct: 24 VALSAATFAIDKPYDYLLPDELRESASPGMRVLIPFGAGNRRIEGIILALGQGQRNA--K 81 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 LKAV+ +LD PV +L LW + Y + + LP Sbjct: 82 LKAVIALLDDNPVLDSESIQLALWMRERYFCTVYEAARAMLP 123 >UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugamushi RepID=A5CFA8_ORITB Length = 646 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 194/537 (36%), Positives = 299/537 (55%), Gaps = 17/537 (3%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L L+ EQ A AI T A LL G+TGSGKTE+Y ++ L QG Q L+++PEI Sbjct: 119 LDLSPEQQLAFDAIRK---TTGATLLQGITGSGKTEIYFHLIAEALRQGLQVLLLMPEIN 175 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 L RF RF + +S ++ S + E +VIGTRS++F P+ +LG+ Sbjct: 176 LAGHIAFRFASRFKFNAVIWNSSVSKSLKKKTLRGILTNEIKVVIGTRSSIFLPYSSLGL 235 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYKQ+ Y+ARD+AV R H IP+IL SATP+LE++ N KKY L++ Sbjct: 236 IIVDEEHDQSYKQENNILYNARDMAVMRGHIANIPVILASATPSLESIYNTYNKKYSLVK 295 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 L R G++ +++D+K + + G L+ +L M Q L+ + Q++LFLNR+G+AP + Sbjct: 296 LKSRFGSSTLPNINIIDMKKEHLPNGMWLSTSLKNAMEQTLKLNKQILLFLNRKGYAPII 355 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQL 494 LC +CG+ C C H++++ L+CHHC S +P + CP C L G G E++ Sbjct: 356 LCRNCGFRFMCSSCSSCLVFHKSKNKLQCHHCGSFKPFAQSCPECNEQTLSAYGPGIERI 415 Query: 495 EQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + + FP + + RDTT+ + L ++ I+IGTQML KG+HFP++ LV Sbjct: 416 AEEVKVYFPKYKTAIVSRDTTNTIDNSTEILQQIINNEVDIIIGTQMLTKGYHFPNLKLV 475 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 ++D D + D R+ E+ QL QVAGRAGR +G V +QT++P+ LL+ L+ Sbjct: 476 GIIDADLG-YGGDLRANEKTYQLLNQVAGRAGREEDKGYVYIQTYYPDSSLLKYLINYKD 534 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLG 674 D F + R +PP T V + + Q+A Q++ I+ + L +LG Sbjct: 535 DDFINYEMNLRISNNMPPATRFVAISVISTSEQNA----QEVAKNIVRTAKPCSSLRILG 590 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIIN--GTLALINTIPDSRKVKWVLDVDP 729 P PAL K ++R++ILL ++ ++ I L+ S++V +D+DP Sbjct: 591 PAPALLYKLKNKYRFRILLIFERKLDIRSYIKHWNILSF-----HSKRVSLKIDIDP 642 >UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribacterium sinus F0268 RepID=C2KVD6_9FIRM Length = 660 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 189/518 (36%), Positives = 296/518 (57%), Gaps = 13/518 (2%) Query: 198 RLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 +LN EQ + A+ + + LL GVTGSGKTE+YL ++E+ LA+GK+ + ++PEI Sbjct: 126 KLNAEQEEVLFAMQEYFQEEEAPSALLFGVTGSGKTELYLRLIEDCLAKGKEVIYLIPEI 185 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 L+ Q+ R RF V +LHS ++ ER + K ++GE +++G RSALF PF NLG Sbjct: 186 SLSHQSRMRVEGRFPGQVAILHSKMSQGERAESMEKCRSGEVKLLLGPRSALFAPFSNLG 245 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I+IDEE + SYK + RY +RD+A R + P++ GSATP++ ++ K RL Sbjct: 246 LIIIDEEQERSYKSETAPRYESRDVARKRGELAKCPVLFGSATPSVNIFREAEEGKVRLF 305 Query: 376 RLTRRA--GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGF 430 L RA G+ P + ++DL+ + + + AL + + L+ Q ILF+NRRG+ Sbjct: 306 TLKNRAVEGSFLPKLT-LIDLRKELEEGNRSIFSKALEEAVLKRLERGEQTILFMNRRGY 364 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 +P + C CG CP CD TLH+ L+CH+C R + + CP+CGS+++ P G G Sbjct: 365 SPFVSCRKCGKSLNCPHCDVSLTLHK-NGMLQCHYCGYSRKLEKNCPNCGSSYISPFGTG 423 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 TE+LE+ +FP I R+D DTT +KG E+ L + + A IL+GTQM+ KGH FP Sbjct: 424 TEKLEKICHAVFPKARILRMDGDTTGKKGKYEEILQDFAQEKADILLGTQMIVKGHDFPK 483 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV ++ + F +DF++ E Q+ TQ AGRAGR GEV++Q++ PE +L+ + Sbjct: 484 VTLVGIMAAEQLFFQSDFQAREYAFQILTQAAGRAGRGKLPGEVLIQSYRPEEEVLELAM 543 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + Y AF + R+ ++ PP+ + ++ + L L++ I L E+ Sbjct: 544 EQDYFAFYQSEKKFRQRLEYPPFARMLAIQCSYQEEEFLSLMLEKTIKRI-RGKLEKEQA 602 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSR---VRLQHII 705 + GP PA K +R I ++ S +RL+++ Sbjct: 603 ELFGPFPATIYKLKDNFRKIIYIKQESHDIIIRLRNLF 640 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 21/91 (23%), Positives = 46/91 (50%), Gaps = 1/91 (1%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 + + F Y +P +++ G V +PFG+ +++ G V+ + + ++ P ++K + L+ E Sbjct: 14 IDKCFTYRVPTEISLSVGDPVLIPFGRGKKK-GYVIGIEELADFPEEKIKDIFSPLEKEF 72 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPI 102 + L +W A+ Y + L LP+ Sbjct: 73 SVEKQLLDLAIWMAEEYGTTLNQCLKTVLPV 103 >UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI5_9FIRM Length = 694 Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 228/675 (33%), Positives = 343/675 (50%), Gaps = 43/675 (6%) Query: 15 TFDYLLPEGMTV--KAGCRVRVPFGKQ---------QERIGIVVSVSDASELPLNELKAV 63 + D+L G +V + G R VPFGK +E G + S+S P+ E++ Sbjct: 14 SLDHLFTYGSSVPIERGIRCYVPFGKSRRMAFVDHSEEYDGTLESLSQKLGYPVKEIQ-- 71 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 ++LD EP+ ++ L LW + + + ++ + R EQ Sbjct: 72 -QILDEEPLLNQELYDLALWLKE---KTLSTTIACFQVMMTNKKRVKGKVK---SVVLEQ 124 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND---AALQALRKKGLCDLASET 180 V S S KQ Q L +++ ++ E + ++ L KG+ + Sbjct: 125 IIEVADESFSLSVKQAQCLRYVQE----HTPISYTELRKKYPSIVKTLLNKGVF-IKKAQ 179 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 S + V ++ LN EQ A I LL G TGSGKTEVYL + + Sbjct: 180 ERLSFLQAEQEVQPLKV-LNQEQTKAYQLIQRKE---GVHLLYGQTGSGKTEVYLHLAKK 235 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 + +GKQ L++VPEIGLTPQ + R F + + HSGLN+ ER + K G ++ Sbjct: 236 AIEEGKQVLILVPEIGLTPQMVNRVSRVFGQDLGMYHSGLNEQERYEQYQLVKQGRLKVI 295 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +GTRSA+F PF+ LG+IV+DEEHDSSYKQ YH RD+AV RA P++LGSATP+ Sbjct: 296 VGTRSAIFLPFQKLGLIVLDEEHDSSYKQDVQPSYHCRDVAVERAGFHHCPLVLGSATPS 355 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQ 416 LE+ + Y+++ L R G + HV+D+ Q+++ G L+ L R+ + L+ Sbjct: 356 LESYAKALKGVYQMVSLKTRFGQDMAKV-HVVDM-SQEIRQGKDYILSDELKQRLTEVLR 413 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q IL LN+RG++ L C C + CP CD + H ++CH C + V R+C Sbjct: 414 KKEQAILLLNKRGYSRLLRCKSCQEVLTCPHCDLALSYHADCQKMKCHSCGYEMKVLRRC 473 Query: 477 PSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 P CGS H G GT++L + + FP I R+D D T RK A + L A I Sbjct: 474 PHCGSEHGFSGYGFGTQRLCEEVQKEFPKSRILRMDFDNTQRKNAHRKILESFGNHKADI 533 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+AKG FP+VTLV +L+ D L +D+RS E L Q AGR+GR K+G V+ Sbjct: 534 LVGTQMVAKGLDFPNVTLVGVLNADDGLQRSDYRSGEHTFDLLMQAAGRSGRGEKKGTVI 593 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV----RAEDHNNQHAPL 651 Q ++P H ++ + + Y++F +Q + R + + PP+TS V R E+ + A Sbjct: 594 FQVYNPTHFAIRFAIEQDYESFFKQEMVYRHLAKYPPYTSFVSFTFEGRKEEKVREIAEN 653 Query: 652 FLQQLRNLILSSPLA 666 F Q++ + S +A Sbjct: 654 FQQEIAKICFSLGVA 668 >UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0I4_9FIRM Length = 804 Score = 355 bits (911), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 232/625 (37%), Positives = 324/625 (51%), Gaps = 26/625 (4%) Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 Y+ A E + + L + R P Q++AL R + + E A + + L D Sbjct: 192 YYTAGEITEEL-LRAFTRRPAQRRALELFRMER----EHTLAELKQAGITTATIRHLTDA 246 Query: 177 ASETPEFS-DWRTNYA-----VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 T R +YA GE L ++A A +AA+TF +LL GVTGSGK Sbjct: 247 HILTEHLRRQVRDSYAAGQRETCGETLTEAQQRAVAALQAGAAAETFHGYLLHGVTGSGK 306 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 T VY+ V G+Q +V+VPEI LT Q I F+E F + VLHS L+ +ER A Sbjct: 307 TRVYMETARAVRRAGRQVIVLVPEIALTGQLITAFQEGFAGDIVVLHSRLSLAERNDAIF 366 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + + GEA ++IG RSALFTP N+G I++DEE D SYKQ E RYHAR +A A Sbjct: 367 RVRRGEAGVIIGARSALFTPAGNVGCIILDEEQDMSYKQDESPRYHARVVAEILARRHGA 426 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITR 410 +++GSATP+LET + LLR+ R G +D++ + ++ G L Sbjct: 427 ILVMGSATPSLETYARALSGELTLLRMPERIGAQSLPRVRAVDMRAE-LRLGRRTILSND 485 Query: 411 MR----QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 +R + L Q I+ LNRRG++ +LC CG++ C C H A L CHHC Sbjct: 486 LRDLLTETLARGEQAIIMLNRRGYSTFVLCRACGFVLSCHACGQPMVYH-ADGTLVCHHC 544 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 D + VP CP CGS + G GTE+LE L L P + R+DRDTT RK A E+ LA Sbjct: 545 DLRADVPVVCPKCGSRCIKYFGAGTEKLEAELEQLLPQARVIRMDRDTTGRKHAHEEILA 604 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 R IL+GTQM+AKGH P V V ++ D +L DFR+AER L TQ AGRAG Sbjct: 605 RFRRRDYDILLGTQMVAKGHDLPGVQTVGIISADASLNLPDFRAAERCFMLITQTAGRAG 664 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R G +GEV++QT++PEH +Q+ L + Y+AF Q + RR + PP + V + + Sbjct: 665 RHGARGEVIVQTYNPEHYAVQSALRQDYEAFYAQEIVLRRELFYPPLSRLVKLLFHHMDR 724 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 Q A ++ + + V+GP PAL K G +R+ +L++ +Q + Sbjct: 725 QRAWDAAAAFVDVFQKAFHGRQGYMVIGPSPALIAKERGEYRFVVLIKTLVLTDIQKFLR 784 Query: 707 GT-LALINTIPDSRKVKWVLDVDPI 730 L L N I +D+DPI Sbjct: 785 AQGLHLRNDI--------AIDIDPI 801 >UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=C2VXT4_BACCE Length = 473 Score = 352 bits (902), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 177/450 (39%), Positives = 273/450 (60%), Gaps = 9/450 (2%) Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 + RF+ RF + V VLHS L+ E+ W K E +V+G RSA+F PF+NLG+I+IDE Sbjct: 2 VDRFKGRFGSQVAVLHSALSVGEKYDEWRKILRKEVKVVVGARSAVFAPFENLGIIIIDE 61 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA 381 EH+SSYKQ++ RYHARD+AV+R + PI+LGSATP LE+ ++ Y LL + +R Sbjct: 62 EHESSYKQEDNPRYHARDVAVWRGQYHKCPIVLGSATPTLESFARAKKGVYELLTMEKRM 121 Query: 382 GN-ARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 A P ++ ++D++ ++++ G + AL ++ L+ Q++LFLNRRG + ++C Sbjct: 122 NEQALPTVE-IVDMR-EELRDGNRSMFSKALHEKIADRLEKKEQMVLFLNRRGHSTFVMC 179 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 DCG++ +CP CD T H+ H L+CH+C + +P CP+C ST++ G GT+++E+ Sbjct: 180 RDCGYVVQCPHCDISLTYHKMNHRLKCHYCSYEENMPTACPACQSTYIRFFGTGTQKVEE 239 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 + LFP + R+D DTTSRKG E+ L A IL+GTQM+AKG FP VTLV + Sbjct: 240 EITKLFPEARVIRMDVDTTSRKGMHEKLLKAFGEEKADILLGTQMIAKGLDFPKVTLVGV 299 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 L D L DFR++E+ QL TQV+GRAGR GEV++QT+ PEH ++ + YD Sbjct: 300 LTADTMLHLPDFRASEKTYQLLTQVSGRAGRHELPGEVIIQTYTPEHYSIELAKNQQYDV 359 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F +Q + RR Q PP+ V+V A +++ + S ++ VLGPV Sbjct: 360 FFDQEMQMRRTRQYPPYYYVVLVTVSHPELLKAVQVTEKIVGHLRSH--CSQQTMVLGPV 417 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + P+ R+R+Q ++++ L++++ Sbjct: 418 ASAIPRIKDRYRYQCMIKYKREPNLKNVLK 447 >UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZW7_PHYMT Length = 785 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 195/603 (32%), Positives = 337/603 (55%), Gaps = 24/603 (3%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND- 162 L + R + +Y+F D + ++ +PK++ + + + ++ L+F+ Sbjct: 166 LLKPRYSEKKETFYYF---NPICKDYHQIQLNPKEKHVIEQFKTT-LNIKKIDFLKFSTY 221 Query: 163 AALQALRKKGLCDLASETPEFSDW--RTNYAVS-GERLRLNTEQATAVGAIHSAADTFSA 219 A + L KKG+ + +D+ N+++S +++ LN EQ A+G I + Sbjct: 222 AVINNLLKKGI--ILKYEKNLNDFILHHNFSLSKNKKVTLNQEQEEALGQIDLNKN--KV 277 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHS 278 +LL G TG+GKTEVYL ++E +L +Q L++VPEI L R + +F + ++HS Sbjct: 278 YLLYGKTGTGKTEVYLKLIEKILKNKRQVLILVPEIILIAPLAQRLKSKFTEEKISIMHS 337 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 L+ ER + + KN EA I++GTRSA+F+P ++LG+I+IDEEHD S+ Q+E Y + Sbjct: 338 LLSSKERYNQYKMIKNQEATIILGTRSAIFSPLQSLGIIIIDEEHDESFIQKEQVSYDVK 397 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQ 397 +LA R +P+ILGSATP+LE+ NVQQ Y+LL L +R N P I+ V D+K + Sbjct: 398 ELAKIRTKYHNVPLILGSATPSLESHYNVQQNIYKLLTLNQRILVNNFPLIKLV-DMKKE 456 Query: 398 KVQAGLAP---ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 + L P L ++ + L+ + Q I+F+N +G+AP LLC CG++ +C C+ T Sbjct: 457 LTKGNLEPFSFELKKKLNETLKKNEQAIIFINTKGYAPFLLCRFCGYVPKCIECNISLTF 516 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 ++ ++ L+C+HC CP C + G+G E LE L FP + I R D DT Sbjct: 517 YKKKNLLKCNHCGFSLKFKLICPKCNQKKIKTFGIGIEYLENYLKQNFPTITIKRSDADT 576 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 ++ E E ++ +IL+GTQ+++KG F +VTLV ++ D L DF+++E+ Sbjct: 577 ITKISQYENIWNEFNQNKYQILLGTQIISKGLDFSNVTLVGIIAADSLLKIPDFKASEKT 636 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP-- 632 QL Q +GRAGRA KQG V++Q++ ++ +++++ ++ L ER++ QLPP Sbjct: 637 FQLLMQTSGRAGRA-KQGTVIIQSYDIDNYVIKSVASYQEKYVVQKLLDERKISQLPPFN 695 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQIL 692 + S +++ E + + + + IL +++ +LGP+ +L K+ ++R + Sbjct: 696 YVSKILICHESYLQVFS---ISKNIKYILEQKYNKKEMIILGPILSLISKKNNKYRILLT 752 Query: 693 LQH 695 L++ Sbjct: 753 LKY 755 >UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLK6_9FIRM Length = 798 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 180/511 (35%), Positives = 294/511 (57%), Gaps = 12/511 (2%) Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 S ++L+LN EQ + I ++ + + +L+ G+TGSGKTE+YL ++EN+L QGK ++++V Sbjct: 255 SYKKLKLNKEQKDVLDNILNSEN--NKFLIHGITGSGKTEIYLQLVENMLEQGKSSIILV 312 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQTI RF RF + ++HS L E+L+ W + ++ + IV+G RSA+F+P K Sbjct: 313 PEISLTPQTIERFSGRFGNDIAIIHSRLTIIEKLNQWKQIQDKDIKIVVGARSAIFSPIK 372 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NLG+++IDEEH+SSY + +Y+ ++A Y ++LGSATP++ Sbjct: 373 NLGLVIIDEEHESSYISDQNPKYYTHEVAEYLVGLSGAKLVLGSATPSVNIYERTNSDDI 432 Query: 373 RLLRLTRRA-GNARPAIQHVLDLKGQKV---QAGLAPALITRMRQHLQADNQVILFLNRR 428 +LL L RA N+ P ++ ++D++ + + ++ L+ +L +++ L QVILFLN+R Sbjct: 433 KLLELKNRATKNSLPEVE-IVDMREELLLGNKSILSNSLYEEIQKTLDRKEQVILFLNKR 491 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHH--LRCHHCDSQRPVPRQCPSCGSTHLVP 486 G + + C CG++ +C CD T H+ CH C +P P+ CP+C + Sbjct: 492 GRSSFVFCRSCGYVQKCDYCDISMTYHKDNRKDICICHMCGRTKPKPKICPNCFKQSIKE 551 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G GTE LE+ + F +SRID DT+ KG E+ ++ ILIGTQM++KG Sbjct: 552 FGFGTEALEEYIKNAFKDAKVSRIDADTSKEKGVYEEVYRKMKNKEIDILIGTQMISKGL 611 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 FP+VTLV ++ D +L FRSAE+ QL TQVAGR+GR K+G+V++QT+ P H + Sbjct: 612 DFPNVTLVGVVLADISLNIPSFRSAEKTFQLLTQVAGRSGRGDKEGKVIIQTYKPSHYSI 671 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS---S 663 Y+ F ++ + RR PP V + + ++ L+++R+LI Sbjct: 672 VNSSDHNYEEFFKEEINFRRSFLYPPKAHIVNFQFRSKSVENCMEELKKIRDLIFDKFKK 731 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + + +LGP P +R+ + ++ Sbjct: 732 EINLKNIIILGPNPDAIKWVNMVYRYNLTIK 762 >UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=B8I253_CLOCE Length = 818 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 178/499 (35%), Positives = 284/499 (56%), Gaps = 7/499 (1%) Query: 202 EQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 +QA + + D TF LL G+TGSGKTEVYL ++ + GK+A+++VPEI LTP Sbjct: 284 DQANTLMFLKKQLDSRTFQETLLHGITGSGKTEVYLQLISHCFELGKKAILLVPEISLTP 343 Query: 260 QTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVI 319 Q + RF RF V V+HS L+ ER W ++G+ +V+G RSA+F P +NLG+IVI Sbjct: 344 QMVERFVSRFGNRVAVIHSKLSLGERFDQWKLIRDGKVDVVVGARSAVFAPVENLGLIVI 403 Query: 320 DEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTR 379 DEEH+SSYK + RY+A+++A R ++ GSATP++ET N + K +LL + Sbjct: 404 DEEHESSYKSESLPRYNAKEVAQKRCEINDCLLVYGSATPSIETYYNTETGKIQLLEMKN 463 Query: 380 RAGNARPAIQHVLDLKGQKVQAGLAP---ALITRMRQHLQADNQVILFLNRRGFAPALLC 436 R A ++D++ + P L+ ++++ + + Q ILFLNRRGF+ ++C Sbjct: 464 RPKTAILPKVELVDMRLELENGNKTPFSSRLVEELQKNRENNQQSILFLNRRGFSTFVIC 523 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 DCG+ +CP C T H L CH+C P CPSC S ++ G+GT+++E+ Sbjct: 524 RDCGYTMKCPDCSIALTYHSKTKRLICHYCGFTVQNPSTCPSCKSENIRYFGIGTQKIEE 583 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 ++ L + R+D DT K A E+ L I++GTQM+AKGH FP+VTLV + Sbjct: 584 EVSKLITEASVIRMDMDTVGYKNAHEEILNRFKNENINIMVGTQMIAKGHDFPNVTLVGV 643 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 L DG L + D+R++ER QL TQV+GRAGR G V++QT++ + + + Sbjct: 644 LAADGMLNTGDYRASERTFQLLTQVSGRAGRGDIGGRVIIQTYNTDEYSIIAACNHDFCR 703 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F Q + R+ + PP+T+ ++ ++ + ++ L+ S + + +LGP Sbjct: 704 FYRQEIMIRKRLDYPPFTNIAVITFTGIRDRGVFEASKSIKPLL--SKVCPKDTLILGPS 761 Query: 677 PALAPKRGGRWRWQILLQH 695 + PK ++RW+++++ Sbjct: 762 RSPIPKIASKYRWRLVIKE 780 >UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI18_PETMO Length = 764 Score = 349 bits (895), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 192/539 (35%), Positives = 286/539 (53%), Gaps = 17/539 (3%) Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 L L KKG+ +L+ P + + + LN EQ AV AI + +D LL Sbjct: 213 TVLNTLWKKGIIELSEGFPIYEE--------NTEISLNDEQRQAVEAIKANSD--KPHLL 262 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLN 281 GVTGSGKTEV+ V +L G + L++VPEI LT + + R ++RF N HSGL Sbjct: 263 YGVTGSGKTEVFFEVARPILENGGKVLLLVPEISLTSELMIRLKKRFANYNAAFYHSGLT 322 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLA 341 SER+ W KA NGE +VIGTRSA+F P K+L +I+IDEEHD SY Q E Y A D A Sbjct: 323 SSERVQTWYKAVNGELDLVIGTRSAIFIPMKDLKMIIIDEEHDQSYYQIENVSYDAIDTA 382 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA 401 +R E I +IL SATP + L + + L ++ R P +Q V K +K Sbjct: 383 CFRKDLEDIQLILSSATPRVIDLYKAKANFFYLEKIHTRYFTEMPEVQIVDMKKDEKYNW 442 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + ++ + L+ + +VI+F RG+A ++C DCG+I +C CD T H+ + L Sbjct: 443 IFSKKVVENIEISLKKNKKVIVFTPTRGYANYVICSDCGYIFKCDECDVSLTFHKNERKL 502 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 RCH+C + +P CP CG L G GTE++ LA LFP P+ R+DR L Sbjct: 503 RCHYCGKESELPNFCPKCGGFKLQTRGFGTERVMAELAKLFPSQPLVRVDRTVIKTFKDL 562 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + G +I++GT+M+ KG D+ LV +LD D D+ + E A L QV Sbjct: 563 RNTFNFMKEPGKKIVVGTKMITKGLDIQDLDLVVILDADRYFNFPDYNAQESTASLLMQV 622 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGR+GR K G+V++Q+ PE+ + ++L+ +D AE L +R++ PP+ + ++ Sbjct: 623 AGRSGRKEK-GKVIIQSFQPENHIYKSLIDHNFDLIAENDLEQRKIYGYPPFVTLFMILV 681 Query: 642 EDHNNQHAPLFLQQLRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 NN A + ++ LS + +LGPV + K G +R+QI+++ + Sbjct: 682 ---NNPSADKAKAKANEIVEELSKIENQVDIEILGPVVPIISKLRGNYRYQIIIKSKQK 737 >UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGJ9_9BACT Length = 825 Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 220/634 (34%), Positives = 328/634 (51%), Gaps = 34/634 (5%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL-------QALRKK 171 + +E+ +SL+++PKQ L A I+ D E ++ + + K Sbjct: 202 YHSEESLKALFDSLQKAPKQLAVLMA-----IFTDSTGHKELKKVSILKSKSGSGSSQIK 256 Query: 172 GLCDLASETPEFSD-----WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVT 226 L D ++ D + V G + L+ Q ++ I D L GVT Sbjct: 257 TLIDKGVLEEQYQDEHRLLIKQQQDVLGNK-TLSDAQQLSLDEIKKQFDNKKVVLFEGVT 315 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 SGKTEVY+ ++E LA G Q L ++PEI LT Q + R RF V V HS + ER Sbjct: 316 SSGKTEVYIKLIEEQLAHGNQVLYLLPEISLTSQIVNRLAARFGDQVTVYHSKFSIHERA 375 Query: 287 SAWLKAKNG--EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVY 343 W K EA +++G RSA+ PF+NLG+++IDEEH++SYKQ + RY ARD A+Y Sbjct: 376 EVWQKVLTASPEARVIVGARSAVLLPFENLGLVLIDEEHENSYKQFDPAPRYQARDSAIY 435 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG---QKVQ 400 A+ Q ++LGSATP+LE+ NV+ KY +RLT R G ++DLK +K+ Sbjct: 436 LANLMQSRVLLGSATPSLESAENVRTGKYGWVRLTERYGGVSLPKIELIDLKEANRKKMM 495 Query: 401 AGL-APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 G+ + LI ++ L QVILF NRRG+AP C CG +C +CD T HQ Q Sbjct: 496 KGMFSSQLIDAIQHTLSQGKQVILFQNRRGYAPISECTSCGHSPQCTQCDVSLTYHQTQQ 555 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 LRCH+C P+P QC +CG L G GT+Q+E+ + FP V + R+D D+T K Sbjct: 556 QLRCHYCGYNIPMPNQCHACGMLTLTTKGAGTQQIEEQIKAFFPEVAVGRMDWDSTRGKW 615 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 + + + + +IL+GTQM+ KG F +V LV +++ D L DFR+ ER Q+ Sbjct: 616 SFDAIIESFVQERIQILVGTQMVVKGLDFKNVLLVGVINADHVLNFPDFRAHERSYQMLC 675 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QVAGRAGR+ ++G V++QT+ PEHP+L+ +L Y+ + ER + PP+ + + Sbjct: 676 QVAGRAGRSDRKGNVLIQTYQPEHPILRQVLDHDYEGLYQTQKKERHEYKYPPYYRMIRI 735 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSR 698 + L + N++ S VLGPV P++A R ++ Q++++ Sbjct: 736 TFKSRQYDTVNLASEWFTNVLRQSYEGT----VLGPVFPSVARIR-NQYHKQLVVKIDHN 790 Query: 699 VRLQHI---INGTLALINTIPDSRKVKWVLDVDP 729 Q I + TL I R + DVDP Sbjct: 791 FTPQVIKKTLERTLQSFQAIAAFRSTRVNFDVDP 824 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 3/101 (2%) Query: 6 VALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 V LP+ LP+ + Y + ++ G RV VPFGKQ+ +V + + E K++ Sbjct: 15 VLLPLALPKPYTYKITAEQLESLAVGFRVAVPFGKQKIYTALVTKIHQVAP-QTYEPKSI 73 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL 104 +LD P+ T S + W A YY G+++ LP L Sbjct: 74 AMILDEVPIVTDSQLKFWEWMASYYMCSQGEIMRACLPAAL 114 >UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PKC0_9SPHI Length = 825 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 212/630 (33%), Positives = 332/630 (52%), Gaps = 29/630 (4%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQ-----GKIWRDQVA-TLEFNDAALQALRKKG 172 + +G+ L+SL R+PKQQ A+ A Q +I R + + A++ AL KG Sbjct: 205 YTDTEGKRELLDSLNRAPKQQDAVLAYLQLSKTSSEITRQAIMEAVGCGPASITALIDKG 264 Query: 173 LCDLASET-PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 + + + F S N Q A I+ LL GVT SGKT Sbjct: 265 VFLVKEKVVSRFEGEDIELTAS---FTFNEGQQEAFDQINKLFHNKDVVLLHGVTASGKT 321 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 ++Y+ ++E +A+GK AL ++PEI LT Q R + F + V HS ND+ER W K Sbjct: 322 QIYIRMIEQAIAEGKSALYLLPEIALTAQITERLKLYFGDQLGVYHSKFNDNERAEVWHK 381 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQI 350 E +VIG RS+LF PF LG+++IDEEH+SSYKQ + RYHARD A+Y + Q Sbjct: 382 VLKNEYKVVIGARSSLFLPFHELGIVIIDEEHESSYKQYDPAPRYHARDTAIYLGYIHQA 441 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLKGQK----VQAGLAP 405 I+LGSATP++E+ N + KY L++L +R G A+ P I+ ++++ +K + + + Sbjct: 442 KILLGSATPSIESYYNAKAGKYGLVQLLKRYGTAQLPEIK-IVNISEEKRKDNMHSYFSG 500 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L+ + + + QVILF NRRG P + C+ CG++A+C CD T H+ + + CH+ Sbjct: 501 ILLKEIAETIARKEQVILFQNRRGHTPIIQCNTCGYVAKCVNCDVSLTYHKTTNRMHCHY 560 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C P+ CP+CG+TH+ G GTE++E+ L L P I R+D D+T K ++ + Sbjct: 561 CGHHEAPPQICPACGTTHMESRGFGTERIEEELELLMPDARIGRLDLDSTKGKHGFDKII 620 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 ILIGTQM+AKG F V+L+ +++ D + DFR+ ER L++QV+GRA Sbjct: 621 TAFDEHEYDILIGTQMIAKGLDFGKVSLIGIINADTIINFPDFRAYERAFSLFSQVSGRA 680 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR G+V++QT+ P H +++ ++ YDA + ER+ Q PP+ + + + + Sbjct: 681 GRRDSVGKVIIQTYTPNHRVIEQVVAHDYDAMFLEEATERKNYQYPPFYRLIKIDVKHPD 740 Query: 646 NQHAPLFLQQLRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ----HPSRV 699 Q R+L L S L V+GP P L + + I L+ + S Sbjct: 741 IQKC---FDAARDLASGLRSTLGSR---VIGPEPPLVSRVRNYFIQTITLKIERNNVSIA 794 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +++ ++ + V+ +DVDP Sbjct: 795 KVKELMQQAILSFELDKSHTGVRIQIDVDP 824 Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/94 (31%), Positives = 51/94 (54%), Gaps = 3/94 (3%) Query: 5 HVALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +V LP+ + +T+ Y +P + K G RV V FGK + IV V++ + E K Sbjct: 16 NVILPLAISKTYTYRIPHEWSDKIAVGMRVIVQFGKNKIYSAIVKEVTEMAP-ERYEAKY 74 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVL 96 V+++LD +P+ + +L W A YY +G+V+ Sbjct: 75 VLDILDQQPIVDGAQLKLWEWMASYYMCTLGEVM 108 >UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYR8_9BACL Length = 787 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 192/581 (33%), Positives = 320/581 (55%), Gaps = 16/581 (2%) Query: 121 TEQGQAVD-LNSLKRSPKQQQALAAL-RQGKIWRDQVAT-LEFNDAALQALRKKGLCDLA 177 TE+ +D +K + KQ++ + L KI + +V L ++ + L +K + + Sbjct: 177 TEEFYVLDKYEDVKLTKKQKELVDYLITNNKIKKSKVKDRLNIGNSVTKKLLEKNVIRII 236 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYL 235 E + N ++ +L+ Q I +T F+ +LL GVTG+GKTE+Y+ Sbjct: 237 EEDVKHD---INTSILDNNTKLSGHQQEIYDRISENFNTNKFNEYLLHGVTGAGKTEIYI 293 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 ++E V+ GK+A+++VPEI LTPQ +FR+ F+ + V+HS LN E+ + W K ++G Sbjct: 294 KLVEAVIRVGKEAIILVPEIILTPQIEKKFRKVFSDNIAVIHSRLNAKEKYTEWKKIRDG 353 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + I +GTRSA+F PF NLG+I+IDEEH++SYKQ E RY A+D+A R + ++ Sbjct: 354 KVKICLGTRSAVFAPFNNLGIIIIDEEHENSYKQTESPRYDAKDIARKRGIYNKSTVVYA 413 Query: 356 SATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 SATP+++ N ++ LL+LT R N P I V + + V +A L+T++++ Sbjct: 414 SATPSVDLYYNFEKNNPNNLLKLTHRFNNKLPMINIVHTAEKEDV---IASELLTKIKEK 470 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 ++ QV+L +N+RG+ + C CG + +C CD H+ + L CH C Q+ + Sbjct: 471 IEKKEQVLLLMNKRGYTNFIRCFSCGHLYKCENCDISLNYHKHDNSLHCHFCGYQKKISN 530 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 C LV G +++E+ L PGV I+R+D DTTSRKGA E+ L + + Sbjct: 531 ILKCCEHPELVSGNYGIQRVEEYLYQNIPGVRITRMDSDTTSRKGAYERLLTDFKNHKSD 590 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQM++KG FP++TLV +L +D + F++ E+ QL Q AGRAGR+ K+GEV Sbjct: 591 ILLGTQMISKGLDFPNITLVGVLSIDNMIALPSFKANEKLFQLLVQTAGRAGRSKKEGEV 650 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 V QT+ + +L + Y+ F + L R+++ PP+ + + ++ + + Sbjct: 651 VFQTNIASN-ILDYAIEHSYEKFYKYELNRRKLIDYPPFCKISFITIKGYDEKKTERVAK 709 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 + + I L VLGP +L K +++ I +++ Sbjct: 710 MIFDFISKKQT---NLSVLGPNKSLFYKINNEYKFNIAIRY 747 >UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEQ5_KOSOT Length = 759 Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 234/762 (30%), Positives = 382/762 (50%), Gaps = 70/762 (9%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 PL TF Y +T G RV V F + + VV ++D ELP K V++ LD + Sbjct: 7 PLLDTFTYHTDFPLT--PGERVVVDFA-NRSVVAYVVEITD--ELPEFATKPVLQKLDEK 61 Query: 71 PVFTHSVWRLLLWAADYYHHPIG---DVLF----------------HALPIL----LRQG 107 P T L L ++ + P+G D+ F LPI L Sbjct: 62 PFLTSKDVELALRISERFLCPVGKIFDLFFPPGKVMNVKSFVVPQSQELPIKDIIPLTAA 121 Query: 108 RPAANA-PMWYWFATEQGQAVDLNSLKRSPKQQQALAALR--------------QGKIW- 151 R A + W + + + V K++ Q++ LR Q K+ Sbjct: 122 REKFGAVTIENWKKSRKIRIVHSYEQKKTRVQKKKFVRLRLSIKDLEKIKLTDLQRKVVE 181 Query: 152 ----------RDQVATLEFNDAA-LQALRKKGLCD-LASETPEFSDWRTNYAVSGERLRL 199 R+ + L+ + +Q L KKG+ + ET EFSDW A E L Sbjct: 182 HLFSFDVIEVRELIKNLDLKSISPIQTLEKKGILEVFEDETYEFSDW--TIAPIDE---L 236 Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 +EQ + +I D L+ G+TG+GKTEVY +E VL +G Q L +VPE+ LTP Sbjct: 237 TSEQRRVLNSI--VYDFKGVHLIYGLTGTGKTEVYFKAMEKVLTEGAQVLYLVPEVSLTP 294 Query: 260 QTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 Q +AR + F V V HS L+ ++R WL A G I+IGTRS+++ P + LG+I+ Sbjct: 295 QLLARVKGTFPGREVRVYHSYLSKAKRQGIWLDAHEGNVDIIIGTRSSIWIPMRKLGLII 354 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLT 378 +DEEHD+S+ QQ Y A ++AV + IPIILGSATP + + +Y+L +L Sbjct: 355 VDEEHDASFYQQSSPHYDAVEVAVEKGKLHNIPIILGSATPRVTHYFRAIEGEYKLHKLK 414 Query: 379 RRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHD 438 R P+++ ++D++ K L+ + +++ L+ + Q+ +F++R+GF+ ++C + Sbjct: 415 HRPVGKLPSLE-LIDMRKSKGFYVLSKKALEEIKELLKDEKQIFVFVHRKGFSNYVVCTN 473 Query: 439 CGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTL 498 CG + +CP CD T H+ + L+CH+C P CP+CGS L G GTE++E L Sbjct: 474 CGTVIKCPNCDISLTYHRHGNILKCHYCGFTTPPFSNCPNCGSAALSARGFGTERVEYEL 533 Query: 499 APLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 FP V I R+D++T E+ L + + A++++GT+M+AKG FP V V ++D Sbjct: 534 RNFFPSVKIIRLDKETIESPSDYEKALRMIEQEDAQVVVGTKMIAKGLDFPKVGCVIVVD 593 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D + + + E QL TQ +GR+GR G G+ ++Q+ +P+HP++Q + ++ F Sbjct: 594 SDRLINLPRYDATENAFQLITQASGRSGR-GTFGKTLIQSFNPDHPVIQNAVENDFERFF 652 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPA 678 E + R +++ PP++ V + E + + +++ LI +++ + GPV Sbjct: 653 ETEIKTRELLKYPPFSYFVEMIVEHVDEKRCQKKAEEIAELI-GKEFSEQFFEIHGPVVP 711 Query: 679 LAPKRGGRWRWQILLQ---HPSRVRLQHIINGTLALINTIPD 717 + K GR+R +I L+ S L+ +I A I+ + D Sbjct: 712 VIKKFKGRFRMKIFLKLKPEASMKELRELIKKHSAQIDLVVD 753 >UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T3_9ZZZZ Length = 832 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 230/634 (36%), Positives = 334/634 (52%), Gaps = 67/634 (10%) Query: 133 KRSPKQQQALAALR--QGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 R+PKQ L G + Q A E+ +A+ AL GL + E E Sbjct: 227 SRAPKQAGLARRLADPSGGAYLVQEARREYGASAVTALLSTGLAQVQMEPSERQVGPAEP 286 Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSA----WLLAGVTGSGKTEVYLSVLENVLAQGK 246 + L L QA A+ + +A D+ SA +LL GVTGSGKTEVYL L + L++GK Sbjct: 287 PPAETPLLLTEAQAAALREVRAALDSPSARPQVFLLQGVTGSGKTEVYLQALAHCLSKGK 346 Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 + +++VPE+ LTPQ +ARF RF V VLHSGL +++ W + + G +V+G+R A Sbjct: 347 RGIILVPELSLTPQAVARFNARFPGQVGVLHSGLTPAQQADQWWQVRRGSYPVVVGSRGA 406 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLC 365 +F P + LG+IV+DEEH+ +YKQQ+ YHAR++AV A ++LGSATP + + Sbjct: 407 VFAPQRELGLIVLDEEHEWTYKQQDSAPHYHAREVAVRLAELTGAVVLLGSATPDVVSAY 466 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN------ 419 + +YRLL L R G + G AG+A A + MRQ L+ N Sbjct: 467 RARGGQYRLLTLPHRIGPS-----------GATATAGMARAEVVDMRQELREGNRSAFSR 515 Query: 420 --------------QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 Q ILFLNRRG A + C CG++ C +C YT H A+ L CH+ Sbjct: 516 SLQSALKECIGGGHQAILFLNRRGAASVVQCRSCGFVVRCWQCASPYTYHGAEG-LVCHY 574 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C+ R +P CP C +L +GLGT+++ + + L GV + R DRDT +R G Q+L Sbjct: 575 CNRHRKMPATCPECRRPNLRYLGLGTQRVAEEVEHLLSGVRVLRWDRDT-ARTGRAHQEL 633 Query: 526 AEVHRGG-ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 E G A +L+GTQM+AKG H P VTLV + D L D+R+AER Q+ QVAGR Sbjct: 634 LERFTSGQADVLVGTQMVAKGLHVPAVTLVGAVLADIGLHIPDYRAAERTFQVLCQVAGR 693 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT-------SHV 637 AGR + G+V++QT+ P+H +++ + Y+AF E+ LA RR + PP+ H Sbjct: 694 AGRGAEPGKVIIQTYLPDHYAVRSAQSQEYEAFYERELAFRRAHRYPPFGRLVRLLFGHA 753 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 Q L++ + A + V+GP PA P+ G WRW +LL+ + Sbjct: 754 DAATSRQEAQRMAAALKR-----AAREWAISHVDVVGPAPAYPPRVRGLWRWHLLLRGDN 808 Query: 698 -RVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 R+ L ++ +P + W++DVDP+ Sbjct: 809 PRLLLDKVL---------VPPN----WLVDVDPV 829 >UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteria RepID=C6XMJ5_HIRBI Length = 740 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 261/750 (34%), Positives = 369/750 (49%), Gaps = 53/750 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA-SELPLNELK 61 +A V LP+PLP FDY L E M V+ G V VP G + G+V + S+ PL K Sbjct: 17 IASVLLPMPLPEAFDYRLHEDMKVEVGAFVTVPLGARS-VTGVVWGLKQGPSKRPL---K 72 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM-WYWFA 120 V EVL++ P+ + ++ Y P+G++L + LR +P Y + Sbjct: 73 YVEEVLEAAPLMPQVTRDFVERSSKYTCTPMGNML----AMCLRSRDALLPSPTETYVYR 128 Query: 121 TEQGQAVDLNSLKR-SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS- 178 T+ + L R +P +Q+ L Q A L A + KGL D + Sbjct: 129 TK-------SELPRITPARQKVLDIAPQSADQGMTAAELA-RQADVSTGVVKGLVDSGAL 180 Query: 179 ---ETPEFSDW-RTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTE 232 E P + + N + G L EQ A+ A + F LL GVTGSGKTE Sbjct: 181 AQHEAPIDKPFGKPNSELKG--FDLTDEQQAGADALCEAVRSKEFKPILLDGVTGSGKTE 238 Query: 233 VYLSVLENVLAQ--GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 VY + L Q LV++PEI LT RF RF A HS ER W Sbjct: 239 VYFEAIAEALRTEPDAQILVLLPEIALTQAVRERFENRFGAAPAEWHSNATQKERRRVWR 298 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + G A IV+G RSALF PF+NL +I++DEEHD SYKQ EG Y RDL+V RAH Sbjct: 299 EVGAGRAQIVVGARSALFLPFQNLRLIIVDEEHDGSYKQDEGAVYQGRDLSVMRAHLGSA 358 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALI 408 ++L SATP+LETL N Q +Y+ ++L R G A + D+K L+P L+ Sbjct: 359 TVVLASATPSLETLANAYQGRYQHIKLLARPGAAVLPEILLADMKENPPAKDCWLSPLLV 418 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + Q+L A Q +L+LNRRG+AP ++C CG + P + + T H+ L CH Sbjct: 419 DALEQNLDAGEQSLLYLNRRGYAPLVICKGCGERLKAPDTESWLTEHRYTGMLVCHLTGF 478 Query: 469 QRPVPRQCPSCGST-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 P CP CG+ L+ VG G E+L + + LF G + DT L ++ Sbjct: 479 SMKKPVNCPHCGAADSLMGVGPGVERLAEEVRGLFQGARVEVFSSDTARNPEELNGIISR 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF---SADFRSAERFAQLYTQVAGR 584 + +G ILIGTQ+ AKGH+FP++TLV +D D L +D R+ ER QL +QV+GR Sbjct: 539 MEQGEVDILIGTQIAAKGHNFPNLTLVGAVDADSGLKGGQGSDLRAGERTFQLLSQVSGR 598 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT--SHVIVRAE 642 AGRA K G ++QT+ P+ P +Q LL D F E + R + PP+ + V++ AE Sbjct: 599 AGRADKPGRAIIQTYAPDSPSIQALLANDRDWFMELEMKSREELGFPPFGRLAAVVISAE 658 Query: 643 DH--NNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 + + A F++ +P AD +W GP PA GR R ++L++ V Sbjct: 659 NSLAADDAAATFVR-------GAPNADGVDIW--GPAPAPIAVLRGRHRRRMLIRANRNV 709 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 L ++ A I S V+ LD++P Sbjct: 710 DLSAYLS---AWRERIKLSSSVRVSLDIEP 736 >UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagibacter RepID=B6BRY0_9RICK Length = 651 Score = 348 bits (892), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 185/536 (34%), Positives = 291/536 (54%), Gaps = 10/536 (1%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 + L+ EQ ++ ++ + F +L G TGSGKT VY L+ ++ +G Q L+++PEIG Sbjct: 121 IELSEEQKKSLRKMNVSNQKFRVHVLQGTTGSGKTMVYFEALKAIINKGFQGLILLPEIG 180 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LT Q +F+E F V HSG+ ++ W NGE +VIG RS+LF PFK LG+ Sbjct: 181 LTGQFEKKFKEFFGFTPAVWHSGITKKKKEIIWSGITNGEIKVVIGARSSLFLPFKKLGL 240 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYKQ EG Y+ARD+A+ RA E IPI L +A P++ET N+++ K+ + + Sbjct: 241 IIVDEEHDQSYKQDEGVTYNARDMAISRASFENIPINLITAVPSIETYENIKKGKFTISK 300 Query: 377 LTRRAGNARPAIQHVLDLKGQKV--QAGLAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 L +R NA +++L K+ Q+ L+ +I ++ HL ++QV+ FLNRRGF+P + Sbjct: 301 LEKRYKNASLPNYEIINLNETKLEKQSWLSKKIIEKVNFHLDKNDQVLFFLNRRGFSPHV 360 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQL 494 LC+ C CP C H+ +++L CH+C + + R C G + G G E++ Sbjct: 361 LCNKCFNSYSCPNCSINLVYHKKKNNLLCHYCGFKSSLKRTCVKEGDCEFIFSGPGVERI 420 Query: 495 EQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + + FP I DT ++K + +L ++ +IL+GTQ+++KG HFP + + Sbjct: 421 SEEVKKNFPSKKIEIFSSDTMNKKSS-SDKLEKIIDNEVQILVGTQLISKGFHFPSLNCI 479 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 ++D+D + D R AE+ QLY Q++GRAGR GK V QT++ ++ L Sbjct: 480 VVVDIDLSSQGHDLRGAEKNLQLYHQLSGRAGRTGKPATVYFQTYNTNTKMISDLTNSNP 539 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLG 674 D F ++ L RR LPP+ + + N +N I K VLG Sbjct: 540 DIFLDRELDIRRQNNLPPFQRFISLILTGDNEARLEKEAFYFKNFIEKKI----KGRVLG 595 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 PV A + ++R ++L++ + LQ N +I S +K +DVDPI Sbjct: 596 PVSAPIFRLKKKFRIRMLIRGSKSLNLQ---NSIAKIIANYKFSSGIKLSVDVDPI 648 >UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWK1_METI4 Length = 635 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 192/528 (36%), Positives = 289/528 (54%), Gaps = 26/528 (4%) Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV--LHS 278 LL GVTGSGKTEVYL + L Q KQ L +VPEI LTPQ + R RF + + HS Sbjct: 110 LLFGVTGSGKTEVYLHAMARCLTQKKQVLFLVPEIALTPQLLERIHARFASSYTLGCWHS 169 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 ++ E+ W + + I+IGTRSA+F PF++LG+I++DEEH+SS+KQ+E RYH R Sbjct: 170 RISRGEKAHLWNQVLANQIDILIGTRSAIFAPFRSLGLIIVDEEHESSFKQEESPRYHGR 229 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 D+AV R E ++LGSATP+LE+ N KY L+ L +R + + ++DL+ QK Sbjct: 230 DVAVMRGRLEGSLVLLGSATPSLESYYNALNAKYNLVELKKRVEERKLPLVSIIDLRKQK 289 Query: 399 VQAGLAPA---------LITR-----MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAE 444 +A LI+R + + L QVIL++N RG++ +L C CG++ Sbjct: 290 QRASKTETQKPLSNTEELISRELKEAIEKRLDKKEQVILYINHRGYSSSLQCSSCGYVLP 349 Query: 445 CPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG 504 CP C + H+ L CH C+ P CP C + +G GTE++E+++ LFP Sbjct: 350 CPNCSISLSYHKIPGVLNCHLCNYSSSFPSFCPVCKAGKFKFLGSGTEKVEESIRKLFPA 409 Query: 505 VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF 564 I R+D DT +KG LEQ L + IL+GTQM+AKG FP V+LV ++ +D L Sbjct: 410 ARILRMDSDTIRKKGDLEQALRAFSQHDYDILVGTQMVAKGLDFPHVSLVGIVSIDSLLH 469 Query: 565 SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 DFR++E+ Q QV+GR+GR +GEV +QT P HP +Q + Y FAEQ L Sbjct: 470 LPDFRASEKSFQQLLQVSGRSGRGSIEGEVYIQTRTPYHPAIQFARHHDYLGFAEQELEF 529 Query: 625 RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRG 684 R+ + PP+ +++R N + +L Q+ + + D+ V P PA K Sbjct: 530 RKSLSYPPFYRAIMIRFVG-NPEEKVKYLAQVLTREIKEKIEDDTTLVGTPSPAPIVKVK 588 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK---VKWVLDVDP 729 ++ +Q+ +R ++ + L + D ++ + +D+DP Sbjct: 589 SQYHYQLF------IRSLKVLEASQKLREILLDRKETLGITLRIDIDP 630 >UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales RepID=C8X3K7_DESRD Length = 778 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 253/778 (32%), Positives = 386/778 (49%), Gaps = 80/778 (10%) Query: 15 TFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 T Y LPEG + G RV VP G+ R G+++ + +S P ++LK + L+ P Sbjct: 16 TLTYTLPEGFPHSLWQPGLRVWVPVGRAL-RPGVLLRPASSSLDP-DKLKPLFWPLERAP 73 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + + ++ A G +L ALP LR + A A A + + + L++ Sbjct: 74 LLSRDYLEMIEEMAKRVVQDSGAILAAALPAGLRSAKGALVA------AGNKRERLSLDA 127 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFND---------------------------AA 164 L+R + ++ R ++W + A +D A Sbjct: 128 LRRLSETERK----RWAELWSEGQAEWVLHDSEHRDSLQCFVKQDPPWQVRPQAKRQIAV 183 Query: 165 LQALRKKG---------------------LCDLA---SETPEFSDWRTNYAVSG-ERLRL 199 L L KG LCD A PE + + SG E L L Sbjct: 184 LDYLWDKGSVNRGRLRHELGNWAGPVLDTLCDKALVEVAAPEECEPDSCSVASGLEDLVL 243 Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 + EQ+ A+ + AA A L+ GVTGSGKT VY + LA G+ L++VPE+ L Sbjct: 244 SAEQSRALEGLRHAATQHQAALVHGVTGSGKTVVYAHLAREWLAGGRSVLLLVPEVALAR 303 Query: 260 QTIARFRERFNAPVEVLHSGLND---SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 QT+A R L+ G E++ L ++ E +V+GTRSALF P ++ G+ Sbjct: 304 QTLAAVRHFLPGERVYLYHGYQSPKQREKVFTELAGRD-EPCVVVGTRSALFLPLRDTGL 362 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 +V+DEEH S+KQ E Y A++LA +R Q ++LGSATP L+T ++++ + Sbjct: 363 VVLDEEHAESFKQDERLVYQAKELAFFRVRQSQGFLVLGSATPDLKTFSAAREERLPKVT 422 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 L R G ++ ++DL+ + AG A ++ R+++ L+ Q I+ NRRG+AP + Sbjct: 423 LQERVGASQLPEIDLVDLREEPPVAGPFAASVHQRLQEVLERGEQAIIMHNRRGYAPLVY 482 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C CG +A CP C+ T H+ + L CH+C + P CP C ++ VP+G GTE +E Sbjct: 483 CTGCGEVARCPDCEVGLTYHKRRQRLVCHYCGQHKEFPFVCPKCRASQFVPIGEGTELIE 542 Query: 496 QTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + L+ P GV + R+DRD+T R+G LE+ LA RG +++L+GTQML+KGHHFP VTL Sbjct: 543 EYLSTSLPAGVRVDRLDRDSTRRQGRLEEILAAFSRGESQVLVGTQMLSKGHHFPGVTLA 602 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 ++D D L D+R+AER Q+ QVAGRAGR K G V++QT PEH + + Y Sbjct: 603 VVVDGDLGLNLPDYRAAERTFQMLVQVAGRAGRGDKPGHVLIQTRDPEHYCWEFVRRGDY 662 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAE--DHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 + F E+ A R+ + PP+T +VR Q A + R L + A L V Sbjct: 663 EGFFEREAALRQRLSYPPYTKLALVRFSLPTEWEQGAETIREVGRFLRQAGKAAG--LRV 720 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 LGP PA + GR R+ LL+ S ++ + + R+++ LD+DP+ Sbjct: 721 LGPAPAPLGQLRGRLRYHCLLKGESWQEMRTVYQQVRHRFFRV---RQLRIQLDLDPV 775 >UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides RepID=Q3ZZA8_DEHSC Length = 815 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 234/624 (37%), Positives = 333/624 (53%), Gaps = 47/624 (7%) Query: 133 KRSPKQQQALAALRQGK--IWRDQVATLEFNDAA-LQALRKKGLCDLASETPEFSDWRTN 189 K SP+Q + LR+ I + ++ L N+AA L+AL KK L + +E + + Sbjct: 208 KLSPRQTEVFECLRENPQGISKSRLNLLVKNNAAILKALEKKEL--ILTEEHQVFRQPID 265 Query: 190 YA--VSGERLRLNTEQATAVGAIHSAADTFS-------AWLLAGVTGSGKTEVYLSVLEN 240 Y+ + L+L+ Q + +I+ + +T +LL G+TGSGKTE+YL L Sbjct: 266 YSHIETLPHLKLSPPQEKCLESINRSLNTPPEDDQNPRTFLLHGITGSGKTEIYLQALAE 325 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L GK+A+V+VPEI LTPQTIARF RF V VLHS L+ E+ W + KNG+A IV Sbjct: 326 ALRLGKKAIVLVPEISLTPQTIARFAGRFPGRVAVLHSRLSPGEQFDEWQRIKNGQADIV 385 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATP 359 IG RSALF P G+I+IDEEH+ +YKQQ RYH R +A+ ++LGSATP Sbjct: 386 IGPRSALFAPLDKPGIIIIDEEHEWTYKQQNPQPRYHTRTVALKMTEEYGAVLVLGSATP 445 Query: 360 ALETLCNVQQKKYRLL----RLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMR 412 +++ Q Y+LL RLT G + P + ++D++ + + + L + Sbjct: 446 DIDSYFKAQNGLYQLLELPERLTPYRGASLPKTE-LVDMRTELSEGNRSIFSRNLHASIE 504 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 + L Q ILF+NRRG A + C DCG++A C CD T H Q +L CH C P Sbjct: 505 KVLAKHEQAILFINRRGGASFIQCRDCGYVAMCKSCDTPLTYHPDQENLVCHQCGRHYPN 564 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P CP+C S + +G+GT++LE+ FP + R D D T K + +Q + + R Sbjct: 565 PLTCPNCKSRRIKYLGMGTQKLEEETGLAFPQAKLLRWDSDVTKGKDSHQQIMDKFSRHQ 624 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 A ILIGTQM+AKG P VTLV +++ D +L DFR+ ER QL QVAGRAGR G Sbjct: 625 ADILIGTQMVAKGLDLPGVTLVGVINADISLNLPDFRAGERTFQLLAQVAGRAGRGLAGG 684 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT-------SHVIVRAEDHN 645 +VV+QT+ PE+ +Q+ + Y F + +A RR + PP+ SH+ D Sbjct: 685 KVVIQTYTPENYAIQSAVCHDYPGFYAKEIAYRRELNNPPFQKLACLVFSHL---NHDFC 741 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 Q A L Q LR S+ L +LGP PA + GR+R+QI+L+ P+ I Sbjct: 742 QQQAILLAQTLREKADSA--GSGTLEILGPAPAFIQRLRGRYRYQIILRSPNPANFLRDI 799 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 N W +D+DP Sbjct: 800 NLGQG------------WSIDIDP 811 Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 3/96 (3%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 V PV P +F Y +P G+ +K G V PFG + + GIV+ VSD + + + Sbjct: 8 VNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGPKIVQ-GIVLEVSDQPA--FGQTREICG 64 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 V+ P+ + L W + Y I + L LP Sbjct: 65 VISDTPLLSFHQLNLAAWISQTYLCSIYEALSPMLP 100 >UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPQ1_9FIRM Length = 824 Score = 342 bits (876), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 184/544 (33%), Positives = 290/544 (53%), Gaps = 22/544 (4%) Query: 199 LNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L+ EQ+ + D+ LL GVTGSGKT V+L +++ L QGK AL++VPEI Sbjct: 285 LSDEQSAVYSGMSELMDSGKPQCALLKGVTGSGKTTVFLKLIDKALKQGKTALMLVPEIS 344 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LTPQ + F + F + V V+HS L+ +R + + + GEA IVIGTRSA+F P N+G+ Sbjct: 345 LTPQMVRNFTDLFGSNVAVIHSNLSLGQRTDEYKRIEKGEARIVIGTRSAVFAPLDNIGI 404 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 IVIDEE + +YK ++ RY AR +A R ++L SATP+LE+ +Y+L Sbjct: 405 IVIDEEGEHTYKSEKSPRYQARSIAKQRCFYHNATLLLASATPSLESAYFASIGRYKLFE 464 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAP 432 + +R +++D+K + V+ G + AL ++ +LQ Q IL LNRRG+ Sbjct: 465 MKKRYSQPVLPDVYLVDMKVE-VETGNRSNFSRALADEIKNNLQRGEQTILLLNRRGYNT 523 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C CG + +CP C+ T H+ + + CH+C +C SCGS + G GT+ Sbjct: 524 YMNCIKCGEVYKCPNCNIPLTYHKTNNCMICHYCGYTEVFTGKCKSCGSKFIYSTGTGTQ 583 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E ++ LFP + R+D DTT K + E+ + G I++GTQM+AKG F +VT Sbjct: 584 RIEDEISTLFPSARVLRMDADTTMSKFSYEKNFDKFKNGEYDIMVGTQMIAKGLDFENVT 643 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV +L +D +L++ D+ E+ L TQV GR GR K+G LQT PEH +L + Sbjct: 644 LVGVLLIDKSLYAGDYLGYEKTFSLITQVVGRCGRGSKKGRAYLQTFSPEHYVLNLAADQ 703 Query: 613 GYDAFAEQALAERRMMQLPPWTS--HVIVRAEDH------NNQHAPLFLQQLRNLILSSP 664 YD F Q R+ + PP+ + + + D ++ LF++ L + Sbjct: 704 NYDEFFRQECEIRKALLFPPYCDICEIGLSSVDEAVCKKGSDSFVKLFMKNLEGHGIP-- 761 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 + VLGP K G++R++I+++ + + ++ TL P KV + Sbjct: 762 -----IRVLGPSACSVAKVNGKYRYRIIIKCKNNKEFRSVMQATLLDAYKSPALDKVSFF 816 Query: 725 LDVD 728 D++ Sbjct: 817 ADMN 820 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 10/146 (6%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 FDY LP+G V G RV VPFGK ++R+G+V ++ LK + V++ + Sbjct: 25 FDYYLPQGAKVSIGQRVIVPFGKGGKKRVGLVTGFKQNAD--YGRLKDIYCVINDGVILG 82 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 RL+ W D D + LP G A N Y + E +A D S Sbjct: 83 DEALRLMHWLKDNTFCTYFDAVKTILP-----GGMALNVSQRYAISDEFRKAPD--SFAL 135 Query: 135 SPKQQQALAALRQGKIWRDQVATLEF 160 P +Q A L K R+ +E+ Sbjct: 136 EPAEQAVSAMLLGCKSDRELNDMIEY 161 >UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae RepID=Q5FEP8_EHRRW Length = 664 Score = 341 bits (874), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 203/557 (36%), Positives = 315/557 (56%), Gaps = 20/557 (3%) Query: 182 EFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 +FS D Y+ S ++ L+ Q A I ++S LL G TGSGKTEVY V+ Sbjct: 119 QFSVDENKKYS-SDIKINLSDVQKQAYNNIIGKISSYSVILLDGETGSGKTEVYCEVIRE 177 Query: 241 VLAQGK--QALVMVPEIGLTPQTIARFRERFNA--PVEVLHSGLNDSERLSAWLKAKNGE 296 ++ + Q LV++PEI LT Q I R + F PVE HS L R WL G+ Sbjct: 178 LVTRDNTAQVLVLLPEIVLTLQLIKRIKYYFENYFPVE-WHSNLTVKSRREYWLSIAYGQ 236 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 ++IVIG RSALF PFKNL +I++DEEHD+S+KQ G Y+ARD+++ A IP+IL S Sbjct: 237 SSIVIGARSALFLPFKNLKMIIVDEEHDASFKQDYGVIYNARDMSIVLAKQFNIPVILSS 296 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPALITRMRQHL 415 ATP+LET+ N+Q+ +Y +RLT+R G+A+ ++DL K + V L+ L + M + L Sbjct: 297 ATPSLETISNIQKSQYYHVRLTQRFGDAKLPTVKIIDLCKSKMVNRWLSYDLYSSMLKVL 356 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 Q +QV+LFLNRRG+A LC CG+ +C C + H+ ++ L CH+C + + Sbjct: 357 QRQDQVMLFLNRRGYATLRLCKTCGFKVQCKNCATWLIEHKRRNVLLCHYCGYSCTIVDE 416 Query: 476 CPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 C +C + ++ G+G E++ + + L P I+ I D +S++ + L + + Sbjct: 417 CYNCLDKSSVISYGIGVEKVAEDIMTLIPDAKIAIISSDISSKEIGVTIDL--IMQNKVN 474 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 I+IGTQ++AKGH+FP +TLV ++D D L ++D R+ ER QL QVAGR+GR + EV Sbjct: 475 IIIGTQVIAKGHNFPKLTLVGVIDADLGLNNSDLRATERTYQLLHQVAGRSGRFVDRSEV 534 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQT+ + L+++L + F + L R + Q+PP+T + + N + Sbjct: 535 ILQTYDANNALIKSLSSYNRELFYDLELKSRLLTQMPPYTRLIGIIVTGKNEAKV---IN 591 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + ++ S P L VLGP PA ++R++IL++ + V +Q ++ Sbjct: 592 VSKQIVKSLPTT---LTVLGPAPAPISLLNRQYRYRILIKVQNNVVIQKLLTRYKEY--- 645 Query: 715 IPDSRKVKWVLDVDPIE 731 + KVK ++DVDPI Sbjct: 646 YASTGKVKIIIDVDPIN 662 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 6/98 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA----SELPLN 58 +A V LPVP+ +TF Y +P G V VPFG + +GIV+++SD+ E+ ++ Sbjct: 7 IAEVLLPVPVNKTFFYNIPYNENFIVGDYVIVPFGSRL-IVGIVLAISDSIPSTCEVNIS 65 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVL 96 +LK +V S P ++ + W +DY P G +L Sbjct: 66 QLK-MVNCKGSLPGICSALIHFIKWVSDYNVVPAGLIL 102 >UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ74_9SPIO Length = 690 Score = 338 bits (868), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 206/566 (36%), Positives = 296/566 (52%), Gaps = 18/566 (3%) Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSG 229 K+ +L ++ EF+ T+++ S L L+ EQ +AV AI S + + G+TGSG Sbjct: 135 KREAGELNTDGIEFAG--TDFSASA--LTLSEEQRSAVEAI-SGCTGGEFFYVYGITGSG 189 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEV+L LA GK + +VPEI L+ Q ++RF VLHSGL S+RL+ W Sbjct: 190 KTEVFLQAASRALAAGKSVIYLVPEITLSHQVAETVKKRFGDRCAVLHSGLTGSKRLAEW 249 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + GEA IV+G RSA+F P ++LG+I+IDEEHD SYK RYHAR +A+Y Sbjct: 250 RRITRGEARIVVGVRSAIFAPVRDLGLIIIDEEHDGSYKSGFAPRYHARQVAMYLCKKHG 309 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRR-AGNARP--AIQHVLDLKGQKVQAGLAPA 406 P+++GSATP++E ++ R LRL+ R +G A P I+ +L G L+ A Sbjct: 310 CPLVMGSATPSVEAWHLMKTGAIRTLRLSERLSGGALPHIRIESLLHTAG-----ALSAA 364 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LI MR+ Q ILFLNRRGF+ C +CG C C T H+++ ++CH+C Sbjct: 365 LIDEMRRTKTEGKQTILFLNRRGFSHFFKCKNCGHELLCKNCSVPLTFHKSEGLMKCHYC 424 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 P CP CGS +GTE +E+ + FP + RID D + Q L Sbjct: 425 GWTAKPPSACPECGSIEAGYTSIGTEYIEEQVRKTFPDCTVQRIDTDVLQKNKQAVQILH 484 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + G IL+GTQM+AKG +FP V LV + D L DFR+AER L QVAGRAG Sbjct: 485 DFRSGAIDILLGTQMIAKGLNFPGVRLVGIALADTGLQMPDFRAAERTFSLIMQVAGRAG 544 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R GEV++QT++P HP + + + F Q L +R+ ++ PP+ + + + Sbjct: 545 RYVPDGEVIIQTYNPYHPAIVCAQHNDVEGFYTQELHQRQALEFPPFARLIRLVFRSKDQ 604 Query: 647 QHAPLFLQQLRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 Q A R L+ L P + + +LGP + G R Q+LL+ + +Q Sbjct: 605 QKAEEAAYGARELLPQLFPPEGAKDIEILGPSDCMLSLVAGNHRMQLLLRAETLAPMQKA 664 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 + I + V DVDP+ Sbjct: 665 V---YRFITEYKVAAGVYIETDVDPV 687 >UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX29_STRM9 Length = 643 Score = 338 bits (866), Expect = 6e-91, Method: Compositional matrix adjust. Identities = 161/459 (35%), Positives = 269/459 (58%), Gaps = 4/459 (0%) Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 V + LN Q A I ++ + +LL G+T SGKTE+Y+ ++E L + K ++ Sbjct: 113 TVIKNNITLNEYQQKAYEDIVNSDENI--FLLHGITSSGKTEIYIKLIEEALKKDKSSIF 170 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 ++PEI L+ Q + ++ F + + ++HS + + +L W+ +G + +++G RSALF P Sbjct: 171 LLPEISLSSQMVKVIKKVFGSSISLIHSKMTPATKLKEWINIYSGNSKVILGARSALFAP 230 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 KNLG I+IDEEH++SYKQ++ RYH+R++A+ RA E +ILGSATP+ E+ ++ Sbjct: 231 VKNLGYIIIDEEHENSYKQEDNARYHSRNVAIKRAMQEGAKVILGSATPSFESYYLAKKN 290 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGF 430 ++L+ L +R N V+DL +K + L+ L+ M+ L QVIL LNR+ Sbjct: 291 LFKLITLNKRFNNMELPEMEVVDLSNEK--SMLSEKLLQNMKTVLSKGEQVILILNRKLH 348 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 + + C +C CPRC ++++ L C HC+ +R + CP C S +L +G+G Sbjct: 349 SLLVRCIECKEKMICPRCSVNLRYSKSKNILECSHCEYRRKMYETCPYCESKNLELLGIG 408 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 E+LE+ L+ LF I R+D T + + ++ E +I IGTQ+LAKG HFP+ Sbjct: 409 IEKLEEELSDLFGSENILRMDSSTMTSQKDFDKAYKEFSENKYQIAIGTQILAKGFHFPN 468 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +++ D L +DFR E+ QL TQ AGRAGR K+G+V+LQ++ P+ L+ +++ Sbjct: 469 VTLVGIINTDQILSLSDFRVGEKTYQLVTQSAGRAGRGNKKGKVILQSYIPDSKLINSIM 528 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 ++ + E + R+++ LPP++ + + D + A Sbjct: 529 SGDFEGYFEYDMHIRKLLNLPPFSRMIKIIVSDKKEERA 567 >UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTT2_DESAD Length = 780 Score = 337 bits (865), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 227/760 (29%), Positives = 369/760 (48%), Gaps = 71/760 (9%) Query: 29 GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 G RV VP G+ ++ +V E ELK+++ L+ +P+ + ++L Sbjct: 31 GQRVLVPLGRSVRVAFLIETVETPPEG--VELKSIIWPLERDPLLNSNHFKLYRNIGARQ 88 Query: 89 HHPIGDVLFHALPILLRQ---------------------GRPAANAPMWYWFATEQGQAV 127 P+G VL + +P R GR A M ++G+ Sbjct: 89 MQPLGKVLENVVPKRFRSAKVSFKVADRALPARLKALDIGRMPAEKRMELVKIYDEGR-- 146 Query: 128 DLNSLKRSPKQQQALAALRQGKIW------RDQVATLEF-------------------ND 162 +N + +++ +L W Q+ LEF Sbjct: 147 -MNVSLPAAIEKEEYVSLTSDPPWPVRPNAARQLQILEFIFENGPREKGFLKNIMGDWTT 205 Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRL--NTEQATAVGAIHSAAD--TFS 218 ++ L L + E + A +G + + +Q A+ + +A D + Sbjct: 206 GVIKKLHSDSLVKIGPPPEEERNPAEKCAATGPKWDFTPSEQQQGAIDELLAALDEPKST 265 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 LL G+TGSGKT VY++ L QGK +V+VPEI L F + L+ Sbjct: 266 VKLLHGITGSGKTLVYMTAARKCLEQGKSVIVLVPEIALAYALWNGICPLFPDARKYLYH 325 Query: 279 GLNDSERLSAWLKA--KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 G R A +A ++ A+++GTRSALF P +N G+I++DEEHD SYKQ+E Y Sbjct: 326 GYQTPVRKEAIFRALAEDDSPALIVGTRSALFLPVRNPGLIIVDEEHDESYKQEERLPYQ 385 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-PAIQHVLDLK 395 A+++A AH ++LGSATP ++T QQ + ++ + +R G + PA++ V Sbjct: 386 AKEVAYVLAHMTGSLLVLGSATPDIKTFHAAQQGAFEVISMEKRVGKSMLPAVKVVDTSA 445 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + + AP R+++ + Q ++ LNRRGF+P + C DC +CP C+ T H Sbjct: 446 IKNPEQPFAPETEARLKEVVAKGEQAVVMLNRRGFSPLIYCTDCEEPFKCPHCNVSMTYH 505 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP-LFPGVPISRIDRDT 514 + + + CH+C + P C CG ++L+P+G GTE+LE+ +A L P I R+DRD+ Sbjct: 506 KGRERVICHYCGNAYHFPLPCSICGGSNLLPLGGGTERLEEQVAKALPPETKILRMDRDS 565 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T R+ L++ L RG A++L+GTQML+KGH+FP VTLV + + D L D+RSAER Sbjct: 566 TRRQERLDEILKSFARGDAQVLVGTQMLSKGHNFPGVTLVVVSEGDLGLNLPDYRSAERT 625 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL QV+GRAGR K GEV++QT +P++P+ + Y F E+ + +RR + PP+T Sbjct: 626 FQLLVQVSGRAGRGEKPGEVIIQTRNPQNPIWGAVTSADYKTFFEKEIEKRRRFRYPPFT 685 Query: 635 SHVIVRAED----HNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 ++R P F Q+R S + +GPVPA + GR R+ Sbjct: 686 KLTLIRISHPMGWEGEHLCPPFFSQIREAAKES-----GIMAMGPVPAPLAQLRGRKRFN 740 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 LL+ ++ + + ++ PD ++++ +D+DP+ Sbjct: 741 CLLKSDDWMKTRELYA---QILRRNPDKKQIRITMDLDPV 777 >UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7 Tax=Prochlorococcus marinus RepID=A2BPX9_PROMS Length = 758 Score = 337 bits (864), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 210/629 (33%), Positives = 331/629 (52%), Gaps = 26/629 (4%) Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T++ + N L + K+ + L + W+ ++ FN + ++ K + Sbjct: 140 WIETKKEFDIKKNGLTK--KEFFLMDTLSKKGNWQSELIKSGFNYTLINSMVSKNYLVKS 197 Query: 178 SETPEFSDWRTNYA---VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + ++ ++ ++ L EQ A + A LL G TGSGKTEVY Sbjct: 198 RRKKNINSKLNSFLKDHIATKKPNLTNEQKIAFQEFLTMKPG-DALLLWGETGSGKTEVY 256 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA-K 293 + + E+ + K L++ PEIGL PQ I RF RFN V HS + R W K K Sbjct: 257 MRIAEDQFLKKKSCLILAPEIGLIPQLIDRFSRRFNNVVYEYHSNCSPEHRTLIWKKIIK 316 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAVYRAHSEQIPI 352 + E IVIGTRSA+F P KNLGVI++DEEHD SYKQ Y AR++A+ + Sbjct: 317 SNEPLIVIGTRSAVFLPIKNLGVIIMDEEHDVSYKQDSPMPCYDAREIAIEIVKRNSAKL 376 Query: 353 ILGSATPALETL--CNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQAGL---APA 406 I GSATP+++T C + ++ ++L+R+ +R + N P I+ ++D++ + + + Sbjct: 377 IFGSATPSMKTWKKC-IFERNFKLVRMIQRISSNETPEIK-IIDMRDEFKMGNMKIFSNE 434 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH---QAQHHLRC 463 L+ + Q Q I+ + RRG + L C +CG++ CP CD ++H Q + LRC Sbjct: 435 LLQLLPQLRLKKEQAIILIPRRGHSGFLSCRNCGYLINCPNCDVPLSVHLGSQGKKWLRC 494 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H CD + + +CP C ST P G+GT+++ + L FP + + R DRDTTS K Sbjct: 495 HWCDHKSRLINRCPDCHSTAFKPFGIGTQRVIEFLNEEFPDLRVLRFDRDTTSGKDGHRD 554 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L++ +G A IL+GTQMLAKG P++TL ++ DG L D + E+ QL+ QVAG Sbjct: 555 ILSKFSKGDADILVGTQMLAKGIDIPNITLSVVIAADGLLHRPDISTEEKSLQLFLQVAG 614 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 RAGRA K+G+V+ QT+ P HP++ L + Y+ F + R+ L P+ + +++ Sbjct: 615 RAGRAQKKGKVIFQTYKPNHPVISYLQKRDYERFLIENSRLRKDANLFPFCTICLLKLSG 674 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLW-VLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 N + +L +LS ++K W ++GP P+L K G ++RWQIL+ P ++ Sbjct: 675 ENYELTESIAIKLAKYLLS--FCEKKNWKLIGPAPSLIAKVGKKFRWQILIHGPEGTKIP 732 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPIE 731 + L IP + V +DV+P E Sbjct: 733 --LPDRSILWKLIP--KNVFLTIDVNPAE 757 >UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PRIA_TREPA Length = 657 Score = 337 bits (863), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 233/737 (31%), Positives = 351/737 (47%), Gaps = 91/737 (12%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASEL---- 55 P + VPL ++F Y +A G RV PFG + IG V+S S +S Sbjct: 3 PWLELVFDVPLDKSFTYRACAAHAGEALVGRRVLAPFGART-LIGFVISESHSSPADCGG 61 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + K ++ V+D E +F + W M Sbjct: 62 AVGTFKEIIRVIDREALFDQTHLACARW-------------------------------M 90 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 +++ GQA L ++ S K+++ L++ A+ +R+ Sbjct: 91 AHFYLCALGQA--LCAVVPSRKRERTLSSF-----------------ASCAGVRRT---- 127 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 YA+SGE Q A+ AI +A+ ++ + GVTGSGKTEV+L Sbjct: 128 ------------DTYALSGE-------QRKAIDAI-TASTGARSFYVHGVTGSGKTEVFL 167 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 E VLA+GK + +VPEI LT Q + RF + VLHS L+ S+RL W + + Sbjct: 168 RAAEAVLARGKSVIYLVPEIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQCM 227 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 +VIG RSA+F P K LG++++DEEHDSSYK RYHAR +A+YR P ++G Sbjct: 228 RHCVVIGARSAIFAPLKRLGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCADANCPFVMG 287 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP++E + + R L LT R P V+D+ + + L+ L+ +R+ Sbjct: 288 SATPSVEAWYAMLRGAVRRLPLTARVAGGAPPRVEVVDVSKEALL--LSTRLVDEIRKTK 345 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 +A Q +LFLNRRGF+ + C CG+ C +C T H+ ++CH+C Q P Sbjct: 346 EAGYQSMLFLNRRGFSYSFQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPES 405 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C S G+GTE +E+ + LFP I+R+D D R G ++Q + + G + Sbjct: 406 CPCCHSFDTRYGGVGTEYIEEAVQALFPEYRIARVDTDAL-RSGHVQQTMEQFRAGKIDV 464 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+AKG +FP + LV + D L + DFR+AER L QVAGRAGR G V+ Sbjct: 465 LLGTQMIAKGFNFPTLRLVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVI 524 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT +P HP + + ++F Q LA+R + PP+ + + A Sbjct: 525 IQTRNPAHPAVVCAQHGDCESFYAQELAQREALCFPPFVRLIRFVFRSKTRRKAKDAAYA 584 Query: 656 LRNLILSS-PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 L+ + PL + VLGP + + G +R QILL+ PS +Q + + ++ Sbjct: 585 AHALLTAQMPLGAD---VLGPAACVVAQVAGSYRMQILLRAPSFPVVQQVAR---SFLDE 638 Query: 715 IPDSRKVKWVLDVDPIE 731 V DVDP+ Sbjct: 639 FRAPAGVYVESDVDPVN 655 >UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=Desulfovibrio RepID=Q311S8_DESDG Length = 823 Score = 335 bits (860), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 200/558 (35%), Positives = 297/558 (53%), Gaps = 30/558 (5%) Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAW--LLAGVTGSGKTEVYLSVLENVLAQGKQA 248 A + L Q A+ A A ++ SA LL G+TGSGKT VYL + L +G Sbjct: 275 AFENQLFELTDAQQAALRACTDAVESDSAETRLLFGITGSGKTAVYLELARACLEKGLSV 334 Query: 249 LVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS-ERLSAWL----KAKNGEAAIVIGT 303 +++ PE+ L + + RF VL+ G + ER +L +A+ G ++ GT Sbjct: 335 MLLAPEVALACKLYRDVQLRFPGLPAVLYHGYQSAHEREQQFLNLAAQAREGRPVLIAGT 394 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSALF P +LG +V+DEEHD+S+KQ E Y A+++A +R + ++LGSATP ++T Sbjct: 395 RSALFLPVASLGAVVLDEEHDASFKQDERLSYQAKEVAWFRVAQSKGALVLGSATPDVKT 454 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVI 422 V++ + L+ R G ++++K V+ LAP +TR+++ + Q + Sbjct: 455 FHAVREGHMPGIVLSERVGGGTLPAVELVNIKDNAVKETILAPQTLTRIKETVTRGEQAV 514 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 + LNRRG+AP + C DCG +A CP C+ T H+ + L CH+C P P C C Sbjct: 515 ILLNRRGYAPLMYCLDCGSVARCPECEIGLTYHKGRERLVCHYCGHSVPFPSPCAKCRGV 574 Query: 483 HLVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 H +P+G GTE+LE+TL+ + P G + R+DRD+T R G +EQ LA R + IL+GTQM Sbjct: 575 HYLPMGEGTEKLEETLSTMLPHGKKVLRLDRDSTRRPGRMEQILAAFAREESSILVGTQM 634 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 L+KGHHFP VTL + D D L D+R+ ER QL Q AGRAGR + G V++QT P Sbjct: 635 LSKGHHFPSVTLAVVADGDIGLNMPDYRATERTFQLLVQAAGRAGRGERPGSVIIQTRDP 694 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR---------AEDHNNQHAPLF 652 H + Y+ F E+ L RR + PP+ ++R +D N A Sbjct: 695 AHYCWDYIRNCDYEGFFEKELEARRKRRYPPFVKLALIRLSYPMDWPQGQDRVNALASAV 754 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 R L +S VLGP PA P GR R+Q LL+ ++ + + A Sbjct: 755 RASGRELGVS---------VLGPAPAPLPVLRGRRRFQCLLKASDWKTIRMLFH---AAR 802 Query: 713 NTIPDSRKVKWVLDVDPI 730 +P S +++ LD+DP+ Sbjct: 803 QGVPASSRLRLSLDLDPV 820 >UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YQC1_AZOPC Length = 664 Score = 335 bits (859), Expect = 3e-90, Method: Compositional matrix adjust. Identities = 189/544 (34%), Positives = 290/544 (53%), Gaps = 17/544 (3%) Query: 198 RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGL 257 +LN Q I LL G+ E+Y+ ++E L Q +Q L ++PEI L Sbjct: 127 KLNELQKKIFDQIVENFQKKDVCLLHKNISLGEIEIYIHLIERTLKQNRQVLYLLPEIAL 186 Query: 258 TPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA-KNGEAAIVIGTRSALFTPFKNLGV 316 T Q ++ F ++V HS +N ++R+ W + + I++G S++F PFKNLG+ Sbjct: 187 TRQITNHLKQFFGEQLDVYHSKVNLNKRMEIWNNLLSDKQYQIILGVHSSIFLPFKNLGL 246 Query: 317 IVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 I+IDEEHDSSYKQQ+ YHAR+ A+ A +ILGSATP++E+ NVQ KY + Sbjct: 247 IIIDEEHDSSYKQQKIAPYYHARNAAIVLATIHNSKVILGSATPSIESFYNVQIDKYSYI 306 Query: 376 RLTRRAGNARPAIQHVLDLK----GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 +P +D+K +K++ +P LI M+Q L+ QVILF NRRGFA Sbjct: 307 NSNEYLKKTKPLPIISIDVKELKRKRKMKTIFSPLLIEHMKQKLKNGEQVILFQNRRGFA 366 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P + C C W +C CD T H+ L CH+C +P +C CG+ +L +G GT Sbjct: 367 PCIFCKACNWTPKCHFCDINLTYHKESDRLTCHYCGRNYLLPNKCFRCGNLNLQSIGYGT 426 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E++E+ + LFPG ++R+D DTT K +L++ ++ G +ILIGTQ++ KG + V Sbjct: 427 EKVEEEVQVLFPGASVARMDLDTTKVKKSLKKTISNFESGQIQILIGTQIIYKGLNINKV 486 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 L+ +LDVD + DFR+ ER QL Q+ + R QGE++LQT HP HPL++ +L Sbjct: 487 GLIGILDVDTLMNFPDFRAYERTYQLILQMVEKVKRQRTQGELILQTSHPNHPLIKIVLQ 546 Query: 612 KGYDAFAEQALAERRMMQLPPWTS--HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEK 669 + Y + + ER + + PP++ H+++ H + + +L L D Sbjct: 547 QNYKGMYDMQIEERILFKYPPFSRLIHILLY---HKREELLCKVSDKYVHLLQEKLGDR- 602 Query: 670 LWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 V+G + K G + +ILL+ + S + L+ I+ G I R+V D Sbjct: 603 --VVGHDKPIVGKIKGLYIRKILLKIEVNASSIALRKILEGIHTKILKTAGLRRVIIHYD 660 Query: 727 VDPI 730 VDPI Sbjct: 661 VDPI 664 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%) Query: 6 VALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQE-RIGIVVSVSDA--SELPLNEL 60 V LP+PL TF Y +P M + G V V FG+ + G+V+ + S + + ++ Sbjct: 5 VILPLPLNGTFTYFVPTEMESQIMIGSLVVVGFGEYNKYHRGLVLCIEQILPSTINVEKI 64 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 K ++ V S P S R W ++YY +G+V ALP Sbjct: 65 KPILSVESSRPAIRQSQLRFWQWISNYYLCTLGNVFKTALP 105 >UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=18 Tax=Cyanobacteria RepID=Q7V699_PROMM Length = 768 Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 241/698 (34%), Positives = 347/698 (49%), Gaps = 28/698 (4%) Query: 52 ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL--PILLRQGRP 109 SE P L+A+ ++ S V +W + A + H + A P L Q + Sbjct: 80 GSEAPPRHLEAIEALVQSAAV--DPLWFGWIEAMAVHCHISSFRMLKAALPPGWLGQRQS 137 Query: 110 AANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR 169 P W+ + A++ +L + QA A G W+ + F + L Sbjct: 138 HQAEPRRLWWIQLESSAINPQNLPQRQADLQAALAAGGGGAWQRDLQAAGFGSGLVNGLI 197 Query: 170 KKGLCDLASETP-EFSDWRTNYAVSGERLR----LNTEQATAVGAIHSAADTFSAWLLAG 224 K+GL P + S+ + + L L EQ V A S + LL G Sbjct: 198 KRGLIRREKRQPTDASNGLSCSDACDQDLEVPQSLTVEQQEVVEAFQSQP-LGTGMLLWG 256 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VTGSGKTEVYL + L G+ L++ PEIGL PQ + RFR RF V HSG +D E Sbjct: 257 VTGSGKTEVYLQLAARELQAGRHCLILTPEIGLIPQLVDRFRRRFGTKVLEYHSGCSDRE 316 Query: 285 RLSAWLKAKNGEAA-IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAV 342 R+S W + +V+GTRSA+F P LG+IV+DEEHDSSYKQ+ YHARD+A+ Sbjct: 317 RVSTWRQGLTAATPLVVVGTRSAVFLPLAPLGLIVLDEEHDSSYKQESPMPCYHARDMAM 376 Query: 343 YRAHSEQIPIILGSATPALETLCNVQ-QKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA 401 RA ++LGSATP+L + N+ Q + L RLTRR + HV+D++ Q++ Sbjct: 377 DRARRTGARVVLGSATPSLVSWKNLAPQGQLALARLTRRISDQPLPPVHVVDMR-QELAD 435 Query: 402 G----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-- 455 G ++ L+ R+ +A Q ++ + RRG++ L C CG + +CP CD T+H Sbjct: 436 GHRRLISRPLMERLSALPEAGEQAVVLVPRRGYSSFLSCRSCGEVVQCPNCDVALTVHRS 495 Query: 456 -QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 Q LRCH CD + V C CGS P G GT+++ + L G+ + R DRD+ Sbjct: 496 RQGHQWLRCHWCDHRAEVMSSCHKCGSKAFKPFGAGTQRVMEHLVEELQGLRLLRFDRDS 555 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T+ + + L + G A +L+GTQMLAKG P VTL A+L DG L D ++ E+ Sbjct: 556 TAGRDGHRRLLEQFAAGEADVLVGTQMLAKGMDLPRVTLAAVLAADGLLHRPDLQAGEQS 615 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL Q+AGRAGR + G V++QT+ P+HP++ L+ Y F ++ R L P++ Sbjct: 616 LQLLMQLAGRAGRGERPGHVLVQTYCPDHPVIHHLVDGRYGEFLKEEACLRHEAGLVPYS 675 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL-GPVPALAPKRGGRWRWQILL 693 ++R + L I PL + + W L GP PA + GR RWQ+LL Sbjct: 676 RACLLRLSGDSAAVTATAAAVLAEQI--KPLCEAQGWCLVGPAPAPIARVAGRSRWQLLL 733 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 P RL T L N +P R V +D DPI+ Sbjct: 734 HGPEESRLPLPSGST--LWNGLP--RGVSLAVDPDPIQ 767 >UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIQ4_9FLAO Length = 815 Score = 335 bits (858), Expect = 5e-90, Method: Compositional matrix adjust. Identities = 173/504 (34%), Positives = 279/504 (55%), Gaps = 16/504 (3%) Query: 202 EQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 +Q TA I A + LL GVT SGKT +YL ++ + +GK L ++PEI LT Q Sbjct: 283 QQKTAKSEIDEAFEEGKNVLLHGVTSSGKTHIYLEKIDECIKEGKNVLFLLPEISLTKQI 342 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 R +++ + H L D ER+ W + K + I+IGTR+ALF P++NLG+IV+DE Sbjct: 343 TQRLEKKYGRQLGFYHQKLTDFERVEVWRRIKQNDIRILIGTRNALFLPYQNLGLIVVDE 402 Query: 322 EHDSSYKQQEGWRY-HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR 380 EHDS+Y+ +E Y +A+D ++ + +ILGSATP++E+ + ++ K + + L R Sbjct: 403 EHDSAYRPREVSPYFNAKDASLVLGKFYKAGVILGSATPSVESYYSARKDKMKYVFLNER 462 Query: 381 AGNARPAIQHVLDLK----GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 GN +++ K +KV + LI ++ + A NQ I+ NRRG++ + C Sbjct: 463 FGNVNLPEYELINFKEAQESKKVSGNFSLKLIEDIKTTVDAKNQAIVLHNRRGYSNVIEC 522 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CG++ C CD T H+A + ++CH+C + P+ CP C S L G+G EQ+ + Sbjct: 523 ESCGYVNYCSNCDVVMTYHKAANEMKCHYCGQRASKPKTCPKCNSEKLNERGVGVEQIHE 582 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 ++ LFP + R+D D+ +K A E+ ++ G I++GTQM++KG F + LVA+ Sbjct: 583 EVSKLFPENEVDRMDVDSMRKKFAYEKLYEKIEDGETDIIVGTQMISKGLDFDHIELVAI 642 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 D L+ DFR+ ER QL TQV+GRAGR +G++++QT +P+H + Q + Sbjct: 643 PKADSLLYVQDFRAEERAYQLITQVSGRAGRVSGKGKILIQTFNPDHSVFQLIKMNNPAK 702 Query: 617 FAEQALAERRMMQLPPWTSHVIV----RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 + L ER+ PP+T +++ R ED ++ + Q IL L ++ V Sbjct: 703 IYKYILTERQKFHYPPFTKLIMIELKHRREDKADRAS-----QFLGSILRKYLPED--CV 755 Query: 673 LGPVPALAPKRGGRWRWQILLQHP 696 LGP A K +++QI+L+ P Sbjct: 756 LGPERAQIAKLNNLYQFQIMLKLP 779 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 5/108 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A + LP+ L +F Y +PE M ++ G RV VPFG ++ GIV + D + P N Sbjct: 1 MQYAQIVLPLNLKGSFTYKVPEEMMPEIQPGMRVLVPFGGKKIYTGIVFELHDHA--PEN 58 Query: 59 EL-KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 + K ++ +LD +P+ W ++YY +G++ + P L+ Sbjct: 59 FVAKEIISMLDDQPILPQEQIDFWNWLSEYYLCNLGEIYRFSFPSSLK 106 >UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes RepID=A4CNF8_9FLAO Length = 839 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 225/639 (35%), Positives = 330/639 (51%), Gaps = 62/639 (9%) Query: 129 LNSLKRSPKQQQALA---ALRQG-------KIWRDQVATLEFNDAALQALRKKGLCDLAS 178 ++S+ R+PKQ + L LR+G K+ ++Q T + A L+AL KG+ + Sbjct: 226 MDSMGRAPKQSELLLHLFQLRRGTDKPIRSKVLQEQSGT---SRAVLKALIDKGVLE--- 279 Query: 179 ETPEFSDWRTNYAVSGERL------------RLNTEQATAVGAIHSAADTFSAWLLAGVT 226 Y + +R+ LN Q A+GAI S ++ LL GVT Sbjct: 280 ----------EYFLEEDRIVSPGGGAQHQPPELNALQEEALGAIRSGFESDRPVLLHGVT 329 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 SGKTEVYL ++ +++A G+Q L +VPEI +T Q + R + V V HS + ER Sbjct: 330 SSGKTEVYLRLILDMVAAGRQVLYLVPEIAITEQLVRRLQRVLGHRVAVFHSRHSMQERA 389 Query: 287 SAWLKAKNGE--AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVY 343 W + GE A++++G RSALF PF +LG+IV+DEEH+++YKQ + RYHARD A+ Sbjct: 390 ELWYHVRAGEEKASVILGARSALFLPFADLGLIVVDEEHENTYKQFDPAPRYHARDAAIV 449 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL 403 A ++LGSATP++E+ N + KY RL RR G+ ++DL Q + + Sbjct: 450 LAGLSGARVVLGSATPSIESYHNARSGKYAYARLDRRFGDVLLPEMELVDLAEQFRKKKM 509 Query: 404 APALITRMRQHLQA----DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 R+R+ ++ QVILF NRRGFAP + C CG +C CD T H+ + Sbjct: 510 QGHFSERLREEVEGALGQGGQVILFQNRRGFAPIVECASCGHAPQCRNCDVSLTFHRHRK 569 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 LRCH+C R + C +CG+ L G GTEQ+E LA LFP +R+D DTT K Sbjct: 570 ELRCHYCGFHRLLENTCEACGNPTLDTKGFGTEQVEAELAELFPKARTARMDLDTTRGKH 629 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 A + + IL+GTQML KG F +V LV +++ D L FR+ ER QL T Sbjct: 630 AYGRIIQAFEARETDILVGTQMLTKGLDFRNVALVGIMNADSLLNFPHFRAHERCFQLLT 689 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS--HV 637 QVAGRAGR ++G V++QT++P H +LQ + YDA + + ER PP + Sbjct: 690 QVAGRAGRTRERGRVLIQTYNPNHQILQQVASGAYDAMYAEQVYEREQFGYPPALRIIRI 749 Query: 638 IVRAEDHN--NQHAPLFLQQLRNLILSSPLADEKLWVLGP-VPALAPKRGGRWRWQILLQ 694 R ++N + A F + +R VLGP P +A R ++ ILL+ Sbjct: 750 TFRHREYNRVGEGAAWFARSMRMHFGKD--------VLGPEFPPVARIR-NQYHKNILLK 800 Query: 695 -HPSR--VRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 P + ++ I + N I R ++ + +VD I Sbjct: 801 IRPGSGLAQTKNSIKRIESSFNAISQFRSIRVIYNVDYI 839 Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 57/115 (49%), Gaps = 15/115 (13%) Query: 6 VALPVPLPRTFDYLL---PEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V LP+PL R F Y L P G T++ G RV VPFGK + G+VV + E K Sbjct: 28 VLLPMPLERNFTYALGDIPPG-TLRPGTRVAVPFGKSKLYTGLVVGFGHRAP-EAYEAKE 85 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP----------ILLRQG 107 V VLD EP+ T R W ADYY G+V A+P ++LR+G Sbjct: 86 VYRVLDEEPLVTELQLRHWQWIADYYMCTAGEVFRTAVPSVFLLQSETRVMLREG 140 >UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independent DNA replication n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X4B4_FLAB3 Length = 834 Score = 331 bits (848), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 199/617 (32%), Positives = 325/617 (52%), Gaps = 23/617 (3%) Query: 129 LNSLKRSPKQQQALAALRQGKIWRDQVATLE--------FNDAALQALRKKGLCDLASET 180 L SLKRSPKQQ+ L + + + +V + F L+ L +KGL + E Sbjct: 223 LLSLKRSPKQQELLLLILEKETEHPEVPIKKSVIFDEGNFAHTQLKTLIEKGLVE---EY 279 Query: 181 PEFSDWRTNYAVSGERLRLNTE-QATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 D Y E L TE Q A I A LL GVT SGKT +YL +E Sbjct: 280 LLQKDRLATYEGQIEGLEELTESQQRAKTEIDDAFTNDKNVLLHGVTSSGKTHIYLDKIE 339 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 + G+ L ++PEI LT Q + R ++ + H L D ER+ W K +N E + Sbjct: 340 ETVLAGRNVLFLLPEISLTKQIVQRLERKYGRQLGFYHQKLTDFERVEVWRKVRNNEIKV 399 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSAT 358 +IGTR++LF PF+NL +IV+DEEHDS+YK +E ++A+D A A + +ILGSAT Sbjct: 400 LIGTRNSLFLPFQNLRLIVVDEEHDSAYKPREVSPFFNAKDAAQVLAKMYEGHLILGSAT 459 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK----GQKVQAGLAPALITRMRQH 414 P++E+ Q++K + + L R G+ + +++ K +K+ + LI ++ Sbjct: 460 PSVESYYLAQKEKLQYVFLGERFGDVKLPEFELVNFKEEQDSKKIIGNFSVKLIDDIKSE 519 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ + Q ++ NRRG++ + C CG++ C CD T H+ + ++CH+C + P+ Sbjct: 520 LERNKQTMILHNRRGYSNVVECESCGYVNYCANCDVVMTFHKYSNEMKCHYCGQKASKPK 579 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP C S +L G+G EQ+ + ++ LFP + R+D D+ +K A E+ ++ Sbjct: 580 VCPKCHSENLNERGVGVEQIHEEVSRLFPDSEVDRMDVDSMRKKFAYEKLYEKIEESETD 639 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 I++GTQM++KG F ++ LVA+ D L+ DFR+ ER QL TQV+GRAGR +G+V Sbjct: 640 IVVGTQMISKGLDFDNIELVAIPKADSLLYVQDFRAEERAYQLITQVSGRAGRTSGEGKV 699 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT++P H + Q + + L ERR PP+ +++ + ++ A Q Sbjct: 700 IIQTYNPSHSVFQLIRDNDTASIYAHFLEERRKFLYPPFVKLIMIELKHRRDEKASRSAQ 759 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR---LQHIINGTLAL 711 L + +L L +E +LGP + K +++QI+L+ P R + ++ +L Sbjct: 760 FLGS-VLRKYLPEE--CILGPEKSPIAKLNLMYQYQIMLKLPRGKRYLEFKALVLKSLEE 816 Query: 712 INTIPDSRKVKWVLDVD 728 ++ I + VK ++ VD Sbjct: 817 MDEITAYQSVKKLIFVD 833 >UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ83_ERYRH Length = 716 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 225/677 (33%), Positives = 339/677 (50%), Gaps = 43/677 (6%) Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA-TEQG 124 VLD P+ + L LW + Y P+ L LP L+ A T Sbjct: 68 VLDEVPILNQELDDLALWMSYEYMTPMIRCLQTILPNKLKPKSSAGTIKTERVLKLTGHS 127 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 DL +PKQ L L Q + A ++D + L +KG + + Sbjct: 128 MGSDL-----TPKQCAFLKYLDQNTPLSLKAARHYYSD--YRKLIEKGFVEEFEREVTYQ 180 Query: 185 DWRTNYAVSGERLR--LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + + + L+ L +Q A+ I S +LL GVTGSGKTE+YL+ VL Sbjct: 181 EQ----FIKADYLKPTLTPDQIEALNKIQFGVA--STYLLHGVTGSGKTEIYLNAAAQVL 234 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 + KQ L+MVPEI LTPQ I R ERF V + HS LND E+ +++ + + IVIG Sbjct: 235 KEQKQVLIMVPEISLTPQMIQRVSERFGEDVAIYHSALNDQEKYEQYVRVQKQQVKIVIG 294 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRS++F PF++LG+IV+DEEHDSSYKQ + YH RD+A+ R+ P++LGSA+PALE Sbjct: 295 TRSSIFMPFEHLGLIVMDEEHDSSYKQDQVPMYHTRDIAIKRSQFHNCPLVLGSASPALE 354 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG---QKVQAGLAPALITRMRQHLQADN 419 + + Y+LL L R + P + ++D + +K L L++ +++ L A Sbjct: 355 SYARALKGNYQLLELNDRINHTFPTVT-LVDTRTALYEKQSPYLTHTLLSGIKKRLSAGE 413 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS---QRPVPRQC 476 QVIL LNRRG+ L + C CD H+ +RCH C Q P+ Sbjct: 414 QVILLLNRRGYNTLLKNAITNEVLLCEHCDVALNYHKDDQTIRCHMCGESYHQLPLVDGK 473 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P ++ G+GT++L + L +FP I+R+D DTTS+K A ++ L + + IL Sbjct: 474 PP----KIIGSGVGTQRLVEELEGIFPKARIARMDADTTSKKNAHQRILNDFINHQSDIL 529 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKG +VTLV +++ D L +D+RS E + Q AGR+GR GEV++ Sbjct: 530 VGTQMIAKGLDVENVTLVGIVNADATLAYSDYRSVELTFNMLLQAAGRSGRGQYPGEVII 589 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT---SHVIVRAEDHNNQHAPLFL 653 QT +P+H + + + Y F +Q + R++ PP+ S V + + + A Sbjct: 590 QTSNPDHYAIVCAVNQKYKHFFKQEMEYRKIAGYPPYNYLISLVFLDEDALKSWRAAEDF 649 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 Q+L N D+ +LGP +R R R I+L+ + + +I N L L Sbjct: 650 QKLLN--------DQDFQILGPTELRKLQRKHRTR--IILKGKNLESMINICNQALQLYR 699 Query: 714 TIPDSRKVKWVLDVDPI 730 I + V+DV+PI Sbjct: 700 KINGT---GVVVDVNPI 713 >UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWH7_HERA2 Length = 829 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 213/561 (37%), Positives = 297/561 (52%), Gaps = 42/561 (7%) Query: 199 LNTEQATAVGAIHSAADTFS------AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 L EQ I +A DT S LL GVTGSGKTE+YL + L G QALV+V Sbjct: 279 LTLEQERGWRQIVAAQDTASRTGKAKPILLHGVTGSGKTELYLRAIGRALRNGGQALVLV 338 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LT Q + RF RF + VLHS L+ ER W + + G+A + IG+RSA+++P Sbjct: 339 PEIALTTQLVRRFAARFPQQLAVLHSELSVGERYDEWRRLRRGDAQVAIGSRSAIWSPMS 398 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 L +I++DEEH+ S+K + YHARDLAV A +ILGSATP+LET VQ KY Sbjct: 399 KLQLIIVDEEHEHSFKHEATPYYHARDLAVKLAELAGAVLILGSATPSLETAYAVQINKY 458 Query: 373 RLLRLTRRAGNAR------------PAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQA 417 +L L R G P +Q ++D++ + V++ + L + +++ L Sbjct: 459 EVLELHERVGRKTVAGVTKADPIPMPPVQ-IVDMRSELKAGVRSMFSRPLQSAIQRTLDK 517 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH------LRCHHCDSQRP 471 Q ILFLNRRG A ++C DCG +CPRC +H LRCH+C Sbjct: 518 REQTILFLNRRGIASFVMCRDCGTTIQCPRCAVALAVHATAGDAAAPATLRCHYCGHVDW 577 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 VPR CPSC ST + G+GT+++ + + L+P + R DRD T RKG+ E L + + Sbjct: 578 VPRNCPSCFSTRIRDFGVGTQRVVEEVKLLYPQARVMRWDRDVTGRKGSHEALLNQFTQH 637 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A IL+GTQM+AKG P VTLV ++ D AL DFRS ER QL QVAGRAGR Sbjct: 638 EADILVGTQMVAKGFDLPLVTLVGVITADTALNLPDFRSGERTFQLLAQVAGRAGRRAGG 697 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G+V++Q+++PEH +Q Y F + +A RR PP++ + + +N+ Sbjct: 698 GQVIIQSYNPEHYAIQAAAQHDYRQFYREEIAFRRTAHYPPFSRLIRFMTQSPSNKTVER 757 Query: 652 FLQQLRNLILSSPLADEKL-W-VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 ++Q + W ++GP PA K +RW IL++ P L H + Sbjct: 758 VVRQFDTQLREELERRRIRDWAIIGPSPAFLQKVRDLYRWHILVRLPDPTDLLHDLK--- 814 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 IP W +DVDP+ Sbjct: 815 -----IPSG----WTIDVDPV 826 >UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMN6_9SYNE Length = 889 Score = 327 bits (838), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 236/698 (33%), Positives = 339/698 (48%), Gaps = 99/698 (14%) Query: 122 EQGQAVDLNSLKRSP------KQQQALAALRQ--GKIW-RDQVATLEFNDAALQALRKKG 172 ++ QAV L SP +QQ+ + L + G++W D + L+ L+ + G Sbjct: 199 QKRQAVFLTRTIESPASGLTARQQELVHGLARCGGELWLSDALQQLKTTSQTLKKIEALG 258 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 +A S + A+ + +L +Q+ A+ I + LL GVTGSGKTE Sbjct: 259 YLVIAPRERLRSSSHST-ALPDQPKQLTQDQSAALSQIQQI-QGYEEVLLHGVTGSGKTE 316 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VYL + + K ALV+VPEIGLTPQ RFR RF V V HSGL++ ER W + Sbjct: 317 VYLQAIAPHVQARKSALVLVPEIGLTPQLTDRFRSRFGELVCVYHSGLSEGERYDTWRQM 376 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAVYRAHSEQIP 351 +GE I+IGTRSA+F P N+G+I++DEEHDSS+KQ + YHA +A +RA E P Sbjct: 377 LSGEPQIIIGTRSAVFAPLPNIGIIILDEEHDSSFKQDQPMPCYHAGLVARWRAELENCP 436 Query: 352 IILGSATPALETLC--------------NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ 397 ++LGSATP+LET +V+ + RL + P H L L + Sbjct: 437 LVLGSATPSLETWIRFKPLPAPLPQPNDSVEGEFPDSARLLGSTPSQIPRRGHYLCLPTR 496 Query: 398 KVQAGLAPALITRMRQHL--------------------QADNQVILFLNRRGFAPALLCH 437 L P I MR+ L + NQ ILF++RRG + + C Sbjct: 497 VHAQPLPPIEIVDMRKELHEGNRTIFSRTLQTALETLVETGNQGILFIHRRGHSSFVSCR 556 Query: 438 DCGWIAECPRCDHYYTLHQ----AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 CG + ECP CD + HQ A L+CH+C + P +CP C S +L G GT++ Sbjct: 557 SCGHVMECPNCDVSLSYHQTHAEAAARLQCHYCGVSQAHPSKCPKCLSPYLKKFGSGTQR 616 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 + LA P + R D DTT KGA LA RG A +L+GTQML KG P V L Sbjct: 617 VVNDLAKYLPQIKCIRFDSDTTRNKGAHRALLARFARGEANLLVGTQMLTKGIDLPQVVL 676 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL---- 609 V ++ DG LF DFR++ER Q TQVAGRAGR + G V++QT+ PE+ ++Q L Sbjct: 677 VGVIAADGLLFMPDFRASERAYQTLTQVAGRAGRGEQPGRVIVQTYSPENAVIQALRGSS 736 Query: 610 --------------------------LYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE- 642 + Y+ F +Q L +R +Q PP+ +++R Sbjct: 737 TEDEQGISMPQLEKKPMAKQQAIKPQMIDQYEQFLQQELRDRAELQYPPFGRLILLRLSG 796 Query: 643 ---DHNNQHAPLFLQQLRNLILS-SPL-ADEK-----LWVLGPVPALAPKRGGRWRWQIL 692 + + A +L + L +PL A +K +LGPVPA + R+RW IL Sbjct: 797 LEPETVEKAAARLADKLEAINLEVTPLEATDKNTAASYELLGPVPAPIHRVARRYRWHIL 856 Query: 693 LQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L+ + L ++ + + + +DVDP+ Sbjct: 857 LKLAPKAPLPNLTR--------LRPPKGISLTIDVDPL 886 Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust. Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 8/91 (8%) Query: 15 TFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV----VEVLDSE 70 T+ Y +P + V +G V VPFG Q IG VV + + LP N++ A +E + ++ Sbjct: 19 TYIYRVPSELVVSSGDIVGVPFGAQ--LIGGVV-IRILTCLP-NQVSAEAIKPIESVINK 74 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 FT W+LL+ DYY P+ ++ ALP Sbjct: 75 AFFTKGYWQLLIRVEDYYQTPLIRIVRAALP 105 >UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonproteobacteria RepID=A6Q1U1_NITSB Length = 610 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 190/548 (34%), Positives = 295/548 (53%), Gaps = 40/548 (7%) Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + + + + ++L+ +Q A + A D LL G TGSGKT+VYL+ ++ V+ +G Sbjct: 99 YESGGDIDAKEVKLSAKQQKA---LQFAKDK-GISLLFGDTGSGKTQVYLAWMKEVVQRG 154 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 K+A+ ++PEI LTPQ + R F V + HS L+ +R + + G+ +V G RS Sbjct: 155 KEAIFLMPEIALTPQMLKRIEAVFGEAVALWHSRLSKKKREETLRRIREGKVKVVAGPRS 214 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF P KNLG+I++DEEHD SYK Q R HARD+AVY + IP++LGSATP++ + Sbjct: 215 ALFLPLKNLGLIIVDEEHDDSYKSQSRPRIHARDIAVYMGKTLNIPVLLGSATPSVSSF- 273 Query: 366 NVQQKKYRLLRL--TRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVIL 423 K+Y RL + G R + D G++ L+ +++ L Q ++ Sbjct: 274 ----KRYPSFRLKGSYFGGQKR----FIFD-----TSQGVSSQLLGELQKVLDQKKQALI 320 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 FL R L+C +CG +CP CD ++H +H L CH+C+ + +P++CPSCGS+ Sbjct: 321 FLPTRAHFKYLICQECGEAVKCPYCDVGMSVHFDEHALECHYCNFKEYIPKKCPSCGSSE 380 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 L LGT Q++ L FP I R D+D S + LE+ + E + IL+GTQML+ Sbjct: 381 LSTKRLGTAQIQSELQQHFPYARIERFDKDAVSTQRKLEKLIKEFAQKKIDILVGTQMLS 440 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGH +PDV L ++D+D L AD+R+ ER L+ Q++GRAGR + V++QT + Sbjct: 441 KGHDYPDVALSVVMDIDYVLAMADYRARERAVSLFVQISGRAGRK-ESANVLVQTKNEAF 499 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 YK YD F E LA R+ + PP+T + N + ++Q +LS Sbjct: 500 ----FDRYKEYDLFLEDELALRKDL-YPPFTRLAQLNFAHKNEKKVKEAMEQ----VLSC 550 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 EK+ ++G P K G++R+ ILL+ S + AL+ I + Sbjct: 551 LKGFEKIEIVGYGPNAIEKIAGKYRYHILLRSSS----------SKALLQAIYVCKNDLC 600 Query: 724 VLDVDPIE 731 +D+DP++ Sbjct: 601 DVDMDPVQ 608 >UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6Y1_SPHTD Length = 824 Score = 322 bits (826), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 213/631 (33%), Positives = 314/631 (49%), Gaps = 41/631 (6%) Query: 128 DLNSLKRSPKQQQALAALRQGKI--------WRDQVATLEFNDAALQALRKKGLCDLASE 179 D L R+P Q++AL +R+ W D V AALQAL ++G+ ++ Sbjct: 204 DGVDLHRAPAQRRALEVIRRRVALAGDEPIPWHDLVRRPGVTAAALQALAERGVIEILEL 263 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSV 237 + +G L EQA A + +A A +LL G+TGSGKTE+YL Sbjct: 264 PSPSAPPAQPRPGAGSTY-LTPEQAAAWRTLLAALRAGEPEEFLLHGITGSGKTEIYLRA 322 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + +GKQ +++VPEI L QT+ARF ERF V VLHS L + R W G Sbjct: 323 AAWCVGRGKQVIMLVPEIALAAQTVARFNERFPGQVAVLHSTLPPATRYHTWRAVAEGRI 382 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+G RSALF P + +G++++DEEH+ +YKQ RYHAR++A ++LGSA Sbjct: 383 PIVVGPRSALFAPLERVGLVILDEEHEGAYKQDNPPRYHAREVARRLIRQHNAVLLLGSA 442 Query: 358 TPALETLCNVQQKKYRLLRLTRRAG------NARPAIQ-------HVLDLKGQKVQAG-- 402 TP + T + RLL L R G RP + V+D++ + Q Sbjct: 443 TPDVTTYYAAETGAIRLLELPTRVGPRVLGKRGRPEHRTLDLPEVQVVDMRLELSQGHTH 502 Query: 403 -LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L +R+ +++ Q ILFLNRRG A + C CG + +CP CD H Q L Sbjct: 503 IFSRPLQAALRRAVESGEQAILFLNRRGAATLIQCRACGHVEQCPFCDVPLVYHADQRLL 562 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH C+ ++P P +CP+CGS+ + G GT+++E + L PG + R D+D R Sbjct: 563 LCHRCNQRQPPPSRCPACGSSAVGYYGTGTQRVEAEVRRLIPGARVLRWDQDALRRGVEH 622 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + V R +++GTQM+AKG FP V+ V +++ D L D RSAER QL TQV Sbjct: 623 RHLMQRVLRHEVDVIVGTQMVAKGLDFPLVSTVGIINADTLLHLPDIRSAERTFQLLTQV 682 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGR V++Q++ P+H + Y AF + +A RR PP+ + Sbjct: 683 AGRAGRRTPGARVIVQSYTPDHYAIDAASRHDYAAFYREEIAFRRKHGYPPFRRLIRFVY 742 Query: 642 EDHNNQHAPLFLQQLRNLILSSP--LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 + ++ +L+ ++ L + +LGP PA K GR++WQILL+ Sbjct: 743 RHPDEVTCQTTAAEVADLLAATADRLGARDVDLLGPTPAFTAKVRGRYQWQILLRGAD-- 800 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 H + + L W +DVDP+ Sbjct: 801 --SHAVASAVDL--------DPGWAIDVDPL 821 >UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL78_FIBSS Length = 672 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 192/489 (39%), Positives = 270/489 (55%), Gaps = 10/489 (2%) Query: 199 LNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L EQ TA+ ++ D F LL GVTGSGKT VY ++ L + K+ L++VPEIG Sbjct: 145 LTGEQETALASLVEDLDKDGFRGTLLHGVTGSGKTRVYQELVREALKRNKRVLILVPEIG 204 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LTPQT +RF + PV VLHS L+ ++ + +L +G A +V+GTRSA+ +PF + V Sbjct: 205 LTPQTASRFEDYLKVPVVVLHSALSAPQKRAGYLAVLDGSAKVVLGTRSAILSPF-DFDV 263 Query: 317 IVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +++DEEHDSS+KQQ+ RYH RDLA + A ++LGSATP LET N + +LL Sbjct: 264 VILDEEHDSSFKQQDPAPRYHTRDLAFHLAQKYGALVVLGSATPCLETFRNAKAGNLKLL 323 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADNQVILFLNRRGFAPA 433 L RA A V+D+ + Q G ++PAL + + +Q I+ +NRRG++ Sbjct: 324 TLKNRATAAPLPEVKVIDMGKVRQQKGVLMSPALREALSDCIAGGDQAIILMNRRGYSKI 383 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 +C CG C C H+ + L CH+C + PV CP+CG+ VG E+ Sbjct: 384 RVCTKCGETLYCKHCHIPLVYHKQYNALMCHYCAALYPVDTPCPTCGAETYEFVGGAIEK 443 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 LE+ + + R+DRDTT GA+E+ L IL+GTQM+AKGH FP V L Sbjct: 444 LEEEIHEWVADAKVIRMDRDTTQNVGAVEKILTSFRNREYNILLGTQMVAKGHDFPGVKL 503 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 V ++ D L DFRS ER QL +Q AGRAGRAG G V +QT +P P++Q + Sbjct: 504 VGIVGADSGLGIPDFRSTERLYQLLSQTAGRAGRAGSGGRVFIQTLNPTEPVMQYAIRHD 563 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 +D FAE + R+M PP+ V + + L+ N + S + + VL Sbjct: 564 FDGFAETESSNRQMAFYPPFCKLVEISCGSRDEN----LLRDTVNRLESILRKESSMTVL 619 Query: 674 GPVPALAPK 682 GPV A PK Sbjct: 620 GPVDAFVPK 628 >UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae RepID=A5USP2_ROSS1 Length = 868 Score = 321 bits (823), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 230/649 (35%), Positives = 323/649 (49%), Gaps = 65/649 (10%) Query: 129 LNSLKRSPKQQQALAALRQGKI---WRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 L L R+P+Q+ LA L D + + L+AL ++GL D+ + Sbjct: 235 LEGLARAPRQRDLLAYLIDHPDPIPVPDLLTAANADSGTLRALERRGLIDIIAR----DV 290 Query: 186 WRTNYAV------SGERLRLNTEQA--TAVGAIH--------SAADTFSAWLLAGVTGSG 229 WR A+ + L L ++A GA+ AA + +LL GVTGSG Sbjct: 291 WRDPLALLDVPPDTPPTLSLAQQKAWDAIAGALDWCTNATEDRAAPAQTHFLLHGVTGSG 350 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTE+YL + L G+QALV+ PEI LT Q + RF RF + VLHS L+ ER W Sbjct: 351 KTELYLRAIARALRLGRQALVLTPEIALTTQMVRRFAARFPGQLAVLHSELSIGERYDQW 410 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + + G+A I IG+RSA+F P NLG+I++DEEH+ SYK RYHARD+A A Sbjct: 411 RRLRRGDAGIAIGSRSAVFAPLPNLGLIIVDEEHEPSYKHDAAPRYHARDVAQRLATITG 470 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-----PAIQ-------HVLDLK-- 395 +ILGSATP++E+ + RLL L R A P I+ V+D++ Sbjct: 471 SVLILGSATPSVESYAAARAGHLRLLELPERITTATGPDGLPHIRTLPLPHVTVVDMRRE 530 Query: 396 -GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 + ++ + AL + + L+ +Q ILFLNRRG A LC DCG CP C TL Sbjct: 531 LAENNRSIFSRALQAALAETLKRGDQAILFLNRRGSASFFLCRDCGHAMTCPSCSSPLTL 590 Query: 455 HQ---------AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGV 505 HQ + L CH C+ + P CP C S + G+GT+++ + LFP Sbjct: 591 HQEAGDGQAASSGGMLICHTCNHRELPPALCPHCWSARIKSFGVGTQRVVDEITTLFPRT 650 Query: 506 PISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFS 565 R DRD+ +RKG ++ L R A +L+GTQM+AKG P V +V ++ D L+ Sbjct: 651 RTLRWDRDSVTRKGDHDRLLDRFLRHEADVLVGTQMIAKGLDLPMVRMVGVVAADTGLYL 710 Query: 566 ADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAER 625 DFR+ ER QL TQVAGRAGR V++QT+ PEH ++ Y AF EQ +A R Sbjct: 711 PDFRAGERAFQLLTQVAGRAGRREAGAHVIIQTYAPEHYAIRAAQEHDYHAFYEQEIAFR 770 Query: 626 RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP---LADEKLWVL-GPVPALAP 681 R PP+ V ++ A + L N I S LAD+ W L GP PA Sbjct: 771 RQTGYPPFARLVRFVYGAGSDARARRAAEALANDIRSLAVRHLADD--WSLVGPAPAFFR 828 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + R+RW ++L+ L + IP W++D+DP+ Sbjct: 829 VQRNRYRWHLILRALDPTPLIQALR--------IPPG----WIVDIDPV 865 >UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4N3_CAPGI Length = 818 Score = 321 bits (822), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 210/606 (34%), Positives = 308/606 (50%), Gaps = 28/606 (4%) Query: 141 ALAALRQGKIWRDQV-ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRL 199 AL + +Q I Q+ E + + L+ + +KG+ ++ +E + R ++A + L Sbjct: 224 ALRSQKQTSITPQQLLEKAEVSASVLKKIVEKGILEVYTEAVD----RVSFASDSDTWEL 279 Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 Q A+ + + LL GV SGKT +Y ++E LAQGK L +VPE+GL+ Sbjct: 280 TPAQEKALEEVQEQFSQKNTVLLQGVAASGKTLLYSQLIEQTLAQGKSVLYLVPEVGLSV 339 Query: 260 QTIARFRERFNAPVEVLHSGLNDSERLSAW--LKAKNGEAAIVIGTRSALFTPFKNLGVI 317 Q + R F + V H + ER+ W + A +A V+G R+A+ PF +LG++ Sbjct: 340 QLMNRLEHFFGDKMSVYHGKYSSHERVEVWNNVLANKPKAQFVLGVRAAVCLPFHDLGLV 399 Query: 318 VIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 ++DEEHD SYKQ++ R+ RD A+ AH +LGSATP+ E+ N Q KY ++ Sbjct: 400 IVDEEHDLSYKQEQTPPRFQVRDTALMLAHLHGAKTLLGSATPSAESYYNAQVGKYGFVQ 459 Query: 377 LTRRAGNARPAIQHVLDLKGQKV----QAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 L R + ++DLK + Q + L+ + Q L QVIL NRRG+AP Sbjct: 460 LLERYTGIQAPTIELVDLKEKTKKKETQGHFSDTLLAAIEQTLAQHRQVILLQNRRGYAP 519 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS-THLVPVGLGT 491 L C C I +CP CD T HQ Q+ LRCH+C P P CP+CG + L GLGT Sbjct: 520 YLQCDKCDTIPQCPNCDVSLTYHQLQNQLRCHYCGYTIPTPMSCPACGEHSSLKTKGLGT 579 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E++E+ L FP I R+D DTT K E+ + RG IL+GTQM++KG FP V Sbjct: 580 EKVEEELLQFFPKARIERMDMDTTKGKYGFEKIIHHFERGETDILVGTQMVSKGLDFPKV 639 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 LV +++ D L DFR++ER QL + +AGRAGR +QG V++QT++P LQ + Sbjct: 640 GLVGVMNADLFLHQPDFRASERAFQLLSHIAGRAGRK-EQGRVLIQTYNPFQETLQRIQQ 698 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIV----RAEDHNNQHAPLFLQQLRNLILSSPLAD 667 Y A L ER PP+ V + R + NQ F LR + P+ Sbjct: 699 GEYTAMMTAQLTERSDFHYPPYYRLVRIIFRHRELERINQAGQWFADGLRTGLTGYPVE- 757 Query: 668 EKLWVLG-PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS---RKVKW 723 VLG P ++ R + ILL+ +V L + + L L + + R V Sbjct: 758 ----VLGAEFPPISRIR-NEYIKHILLKIAPKVPLSVVKDYILRLEQSFYSTALFRPVML 812 Query: 724 VLDVDP 729 +VDP Sbjct: 813 SYNVDP 818 Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 4/103 (3%) Query: 1 MPVAHVALPVPLPRTFDYLL-PEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M VALP+PL + F Y + PE ++AG RV VPFGK + G+V+ V P Sbjct: 4 MYYTDVALPLPLRQAFTYEVNPEQADFLRAGMRVVVPFGKAKIYTGVVIRVHQHK--PSY 61 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 K + +LD +P+ + +L W + YY G+VL +P Sbjct: 62 PTKPIEFILDEQPMLSSRQLQLFSWISAYYLSTFGEVLKMGMP 104 >UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2 Tax=cellular organisms RepID=B1X5Q1_PAUCH Length = 752 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 242/760 (31%), Positives = 373/760 (49%), Gaps = 70/760 (9%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEVLD 68 P + F Y + + +K G VRV K+ RIG+ + SEL L+++ + Sbjct: 21 PEGKIFTYKNTDRIAIKVGDFVRVRL-KRASRIGLTIKSRTKIPSELKFRHLESIESIF- 78 Query: 69 SEPVFTHSVWRLLLWAAD-YYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE--QGQ 125 E F W L+ YYH +L A P W W + +G+ Sbjct: 79 -EINFIDPNWYSWLYEISIYYHTDFFKILKTAFP--------------WNWSKDDYIKGK 123 Query: 126 AVDL-----NSLKRSPKQQQALAALRQ--------GKIWRDQVATL----EFNDAALQAL 168 L N + P ++A RQ K ++ + L F+ + L AL Sbjct: 124 TSPLTEAFINLVTERPIDRKAFLTNRQIELINYLRTKSIKNCTSNLLKRQGFSLSTLNAL 183 Query: 169 RKKGLCDLASETPEFSDWRTNY---AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGV 225 KK + + + + ++N+ + R +TEQ A LL GV Sbjct: 184 TKKNVIQINLNSNQIIKEKSNWLDSKIKYLRKIFSTEQYIAFRTFEEIGQD-KPLLLWGV 242 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKT +YL L +G L++ PEIGL PQ + R +E + HSG + ++R Sbjct: 243 TGSGKTAIYLQAAAEQLKKGLSVLLLAPEIGLIPQLVDRCQEYLGLEILEYHSGCSKADR 302 Query: 286 LSAWLKAKNGEAA--IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAV 342 ++ W + +A +V+GTRSA+F P LG+I++DEEHDSSYKQ+ Y++RD+A+ Sbjct: 303 ITVWRHCYSFASAPTVVVGTRSAVFLPLNPLGLIILDEEHDSSYKQESPMPCYNSRDIAL 362 Query: 343 YRAHSEQIPIILGSATPALETLCNVQ-QKKYRLLRLTRR-AGNARPAIQHV-LDLKGQKV 399 R ++ +ILGSATP+LET + +KK L RL++R +G P+++ V + L+ + Sbjct: 363 IRRKYHKMKVILGSATPSLETWRSCYGKKKITLARLSKRISGQKLPSVKVVDMRLEFSEG 422 Query: 400 QAGL-APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH--- 455 Q GL + LI ++R + Q I+ + RRG + + C CG + CP CD T+H Sbjct: 423 QKGLFSRLLIEKLRTLKISGEQAIILVPRRGHSSFMSCRSCGEVMICPNCDVSLTVHKNE 482 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 + + LRCH CD + V +C +CGS+ G GT+++ + L + + + R DRDTT Sbjct: 483 EGNNWLRCHWCDYRSKVAPKCGNCGSSAFKSFGTGTQRVVEGLHQVIENLTLMRFDRDTT 542 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 L E +G A +L+GTQML+KG P+VTL +L DG L D RSAE Sbjct: 543 PGHNGHRNLLNEFSKGKADVLVGTQMLSKGIDLPNVTLSVVLAADGLLHKPDLRSAEHCL 602 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL Q+AGR+GR + GE+++QT+ P+HP++ L Y+ F + L+ R+ + P+ Sbjct: 603 QLLLQLAGRSGRGERLGEILVQTYCPDHPVIHHLSDGTYENFLIKELSSRKSFGMAPYNR 662 Query: 636 HVIVRAEDHNNQHAPLFLQQLRN-LILSSPLAD--EKL-W-VLGPVPALAPKRGGRWRWQ 690 ++ N L R +IL+S ++ EK+ W ++GP P A + G RWQ Sbjct: 663 VCLLSISGVCN------LSTSRTAIILASRISSVCEKMGWKLVGPTP--ATRIAGLSRWQ 714 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 ILLQ L I L I + V+ +D DPI Sbjct: 715 ILLQGSEYSSLSFI--KEFQLNENI--EKGVQLSIDPDPI 750 >UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0C0_THERP Length = 812 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 221/596 (37%), Positives = 311/596 (52%), Gaps = 39/596 (6%) Query: 158 LEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--AD 215 L + A +Q L ++GL ++ E P T L L EQ A AI S D Sbjct: 230 LGLSPATVQMLVQRGLVEVV-ELPR-GGLPTVQGGPDRPLTLTPEQQQAWEAIRSMFDQD 287 Query: 216 TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 LL GVTGSGKTE+YL + L +G+QA+V+VPEI L Q + R RF + Sbjct: 288 PPRPLLLHGVTGSGKTELYLRAIGECLRRGRQAIVLVPEIALATQVVQRVAARFPGRTVL 347 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-R 334 +HSGL +SER + W G+AA+V+G RSALF P +++G+IVIDEEH+++YKQQE R Sbjct: 348 VHSGLRESERSAVWEAIHQGQAAVVVGPRSALFVPLRSIGLIVIDEEHEAAYKQQEPPPR 407 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN---------AR 385 YHAR +A A + ++LGSATP + T + + RL +R G AR Sbjct: 408 YHARAVAQRLAELHRAVLLLGSATPDVTTAYAAATSQLAVARLRQRVGPLVVGERGEVAR 467 Query: 386 PAIQ----HVLD--LKGQKVQAGL-APALITRMRQHLQADNQVILFLNRRGFAPALLCHD 438 +Q V+D L+ Q AGL + AL + LQ QV+L +NRRG A + C Sbjct: 468 ARLQLPRVEVVDMRLEHQLGHAGLFSRALHEAIAAALQRGQQVLLLINRRGSATLVQCRS 527 Query: 439 CGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTL 498 CG + CP CD H + L CH CD +R CP+CG L G GT+++E+ + Sbjct: 528 CGHVEVCPLCDVPLVYHADRRQLICHRCDLRRLPSTTCPTCGRPALSYYGAGTQRVEREV 587 Query: 499 APLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 FP + R DRD R L V R +++GTQM+AKG FP VT V ++ Sbjct: 588 QQRFPQARVLRWDRDVVQRGNDPRSLLQRVLRREVDVIVGTQMVAKGLDFPAVTTVGIVH 647 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D ++ D+R+AER QL TQVAGRAGR G VV+QT+ PEH ++ + YDAF Sbjct: 648 ADTGIYLPDYRAAERTFQLLTQVAGRAGRHLPGGLVVIQTYTPEHYAIRAASRQDYDAFY 707 Query: 619 EQALAERRMMQLPPWTSHV--IVRAEDH--NNQHAPLFLQQLRNLILSSPLADEKLWVLG 674 ++ LA R+ PP+ V +VR D + ++LR + L+ + VLG Sbjct: 708 QEELAFRQRHGYPPFRRLVRLVVRHRDELAGRLASEEMAERLRE--KARELSARDVEVLG 765 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 P PA + G ++WQ+L++ R ++ IP W++DVDP+ Sbjct: 766 PTPAFVSRIRGLYQWQLLVRGADGPR----------VVAAIPVHG--GWIVDVDPV 809 >UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H5_9FIRM Length = 728 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 207/581 (35%), Positives = 315/581 (54%), Gaps = 22/581 (3%) Query: 25 TVKAGCRVRVPFGK-QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLW 83 TV+ G V VPFG+ + R+G+V++ E +LK + +V + T + RL+ + Sbjct: 31 TVRLGSMVLVPFGRGSRARMGVVLACDAEPE--SAKLKFLFDVAPASACLTPELLRLVHF 88 Query: 84 AAD----YYHHPIGDVLFHAL---PILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSP 136 + Y+ + V+ + P + G + V K P Sbjct: 89 LKERTFCTYYEAVKAVIPYGAQYKPTVAEDGVTPVLQKQLVRHTENAYKLVGTLPPKPRP 148 Query: 137 --KQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSG 194 KQ A+A L G+ + + A L L KG+ + S+ + D ++ + Sbjct: 149 TAKQLAAVALLAGGERTLSALEEKGISRAVLDNLCAKGVLE-CSKVNKSIDLYSSIPLKN 207 Query: 195 ERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 E + L EQ A A+ + + + LL GVTGSGKT V+L ++E+ L G++ALV+V Sbjct: 208 EPILLTEEQQAAYDALLPGLEDAAPHSALLYGVTGSGKTLVFLKLIEHCLQMGRRALVLV 267 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ I R + +F V V HS LN +ERL W ++G A IV+GTRSA+F+P + Sbjct: 268 PEISLTPQMILRLKSQFGKRVAVQHSALNHTERLLQWQMIQDGGADIVVGTRSAIFSPLE 327 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 N+G+++IDEE + +Y+ + RY A ++A RA ++L SATP+ E+ Q + Sbjct: 328 NIGLVIIDEEQEHTYRSESAPRYSAHEVARQRAAENGALLLLASATPSTESYYAAQHGRT 387 Query: 373 RLLRLTRR-AGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRR 428 +L+RLT+R GN P +Q ++D++ + ++ A+ +R +L+A Q IL LNRR Sbjct: 388 QLVRLTKRYGGNPLPKVQ-IVDMRAELASGNPREISLAMEDAIRHNLEAGKQTILLLNRR 446 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR-PVPRQCPSCGSTHLVPV 487 G+ C DC + +C +C H++ H L CH+C SQ P P +CP+CG L Sbjct: 447 GYQTVAQCEDCREVLKCQKCSVPMVYHKSAHKLLCHYCGSQMDPPPARCPACGG-KLQYR 505 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 G GT++ E+ LA LFP I R+D+DTT+ K A E+ LA+ R I++GTQM+AKG Sbjct: 506 GFGTQKAEEELAKLFPEARILRMDQDTTAAKDAHEKLLAKFARHEYDIMVGTQMVAKGLD 565 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 F DVTLV +L +D LF+ FR+ E L TQV GR+GRA Sbjct: 566 FEDVTLVGVLGIDSLLFAQGFRAYETVFSLVTQVVGRSGRA 606 >UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, PriA n=9 Tax=Wolbachia RepID=Q5GRP1_WOLTR Length = 786 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 178/508 (35%), Positives = 279/508 (54%), Gaps = 35/508 (6%) Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 Q L+++PEI LT Q + R R + + + HSGL R + WL NG A I+IG RSA Sbjct: 287 QVLILLPEIVLTSQLVNRIRSQTSRNLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSA 346 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 LF P+KNL +I++DEEHDSS+KQ++G Y+ARD+A+ A E IPIIL SATP LET+ + Sbjct: 347 LFLPYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILAKIENIPIILSSATPLLETIYH 406 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLN 426 V+ Y ++L +R G A + V+D + K ++ L ++Q ++ QV+LFLN Sbjct: 407 VKNGNYNYVKLAKRFGGAELPLIKVVDTRNNK--QWISNELFEGIKQTIEKKQQVMLFLN 464 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH-LV 485 RRG+A +C CG+ C C + H+ ++ L CHHC Q +P +C +C S L Sbjct: 465 RRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLF 524 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G+G E+L + L P + I D S ++ L E I+IGTQ++AKG Sbjct: 525 LYGIGIERLLEETVKLIPNAKTAIISSDQKSVSNVIDLVLKE----ELNIIIGTQIIAKG 580 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H+FP +TLV +++ D +L +AD R+AE+ QL QVAGR+GR ++G V++QT+HPE + Sbjct: 581 HNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSV 640 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI--------VRAEDHNNQHAPLFLQQ-- 655 ++ L ++ D+F E L R ++PP++ + + + N+ A Q Sbjct: 641 IKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCL 700 Query: 656 -----------LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ--HPSRVRLQ 702 + L L S ++ +LGP PA ++R+++LL+ + + +Q Sbjct: 701 SKKLPSSSSLSFQCLTLKS--RKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQ 758 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPI 730 + + N P+ + +DVDPI Sbjct: 759 KKLKYWIKNCNLSPN---IIVTIDVDPI 783 Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/51 (49%), Positives = 31/51 (60%) Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 VS +LN EQ A I S + +S LL G TGSGKTEVYLSV+ ++ Sbjct: 117 VSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQLI 167 >UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepID=Q2GEJ5_NEOSM Length = 709 Score = 315 bits (808), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 227/745 (30%), Positives = 375/745 (50%), Gaps = 61/745 (8%) Query: 5 HVALPVPLPRTFDYLLPEG-MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 +V LP+PL F Y G V G V+V F + ++ G+V SV +P +E + + Sbjct: 4 NVVLPLPLDSGFLY--SSGHFDVYVGSLVKVDF-RGRKITGLVTSV-----VPESEHEYI 55 Query: 64 V-EVLDSEPV--FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + E+L E V F+ + L W A Y +G VL AL + P + A + Sbjct: 56 IKEILAVEQVRPFSSEYVQFLSWIAYYNFTKLGLVLRSALV----KDIPDSAA----YIL 107 Query: 121 TEQGQAVDLNSLKRS---PKQQQALAALRQGK-IWRDQVATLEFNDAALQALRKKGLCD- 175 T N+++RS P + LA R + I D + + +Q L G + Sbjct: 108 TN-------NNIERSCLTPAVCRVLALFRGSQYITSDTLDAEKIQRKTVQKLIDIGAIER 160 Query: 176 ---LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 SE + + + L+ EQ+TA I + F+ +LL GVTGSGKT Sbjct: 161 IHASVSEIKALPE-----ELKKLKFELSDEQSTAREKI--CMEGFTVYLLDGVTGSGKTL 213 Query: 233 VYLSVLENVLAQ--GKQALVMVPEIGLTPQTIARFRERFNAPVEVL--HSGLNDSERLSA 288 VYLS +L + Q +++ EI L R ++ F VE++ HS L+ + R Sbjct: 214 VYLSAALEILQRDAAAQVIMLFSEIALASYIFERIKKSFLGMVEIVEWHSDLSPARRRKN 273 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHS 347 W K +A ++IG RSA+ P NL +IV+DEEHD S+KQ +G + Y+ARDLA+ R Sbjct: 274 WHKVVTNKARLIIGARSAILLPIPNLQMIVVDEEHDQSFKQDQGDFTYNARDLAIMRGKL 333 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPA 406 IP+IL SATP+LE+ NVQ+K + L L RR G A+ V+D+ K QKV ++ Sbjct: 334 FNIPVILSSATPSLESYYNVQKKGFVHLTLERRFGGAQLPDVRVVDMRKAQKVSQHISHE 393 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L + + Q +LFLN+RG+A ++C CG +CP C + H+ + L CH C Sbjct: 394 LYEELNCTFDSGMQSLLFLNKRGYASIIICSSCGHRMKCPDCIAWLVEHKQNNTLLCHLC 453 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 +RP+ +C C S ++ G G E++ + + LFP + + DT + + + Sbjct: 454 GFKRPMITKCEECSSDKIISFGPGVEKIAEEIGELFPSKEVLIMSSDT-----KITENIQ 508 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 ++ +G I+IGTQ++AKG+ FP +TL+A++D D ++ + D R++E+ Q+ Q GR G Sbjct: 509 KIEKGDVDIVIGTQIIAKGYDFPRLTLLAIIDSDVSMHTGDLRNSEKSFQILQQAIGRVG 568 Query: 587 RAGKQ-GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 R G VVLQ++ + +++ L + F ++ L R ++PP++ + + Sbjct: 569 RRKVYPGRVVLQSYSTDSVVVEALKNNDRETFYKEELKMRLAEEMPPFSRLISIIISGLI 628 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + + +++ I+ P+ ++ V GP PA R R+R++IL+ P ++++ Sbjct: 629 EREVIAYARKIAKTII--PI--REINVFGPCPAAIGMRKKRFRYRILIVVPKNFFSRNML 684 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 L+ +KV+ +D DP+ Sbjct: 685 TD---LLTQFTAEKKVEVQVDTDPL 706 >UniRef50_D0RQY4 Primosomal protein N' n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RQY4_9RICK Length = 656 Score = 315 bits (807), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 170/537 (31%), Positives = 281/537 (52%), Gaps = 12/537 (2%) Query: 198 RLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 LN+EQ + I D +S LL G+ GSGKT +Y +++ L + Q LV++PE Sbjct: 125 NLNSEQEDILKNIEKKIDFKKYSTNLLQGIPGSGKTHIYFEIIKKALEENYQVLVLLPEK 184 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 GL+ Q RF++ F + HSG+ D + W E +++G RSALF PF+NL Sbjct: 185 GLSEQIAKRFKDFFQYEPAIWHSGIKDKIKKKIWKGVFKNEIKLILGARSALFLPFQNLK 244 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +IVIDEEHD+SYKQ+EG ++ARD+A+ +A +Q P L SATP++ET N + KKY Sbjct: 245 LIVIDEEHDASYKQEEGISFNARDMAILQASIDQFPTFLVSATPSVETFYNSKNKKYNYF 304 Query: 376 RLTRRAGNAR-PAIQHVLDLKGQKVQAGLAPALITR-MRQHLQADNQVILFLNRRGFAPA 433 L R + P IQ + K + L+ + ++ +L+ +QV+ FLNRRG + Sbjct: 305 SLKNRFNQSELPEIQTIKLTKDNISENNFISELVVKEVKNYLKTGDQVLFFLNRRGHSTF 364 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 + C+ C ECP+C H+ + CH+C+ + RQC + GLG E+ Sbjct: 365 VFCYKCMKRLECPKCSVGLVYHKRDNTALCHYCNYSTKLERQCKDNSKCNFKFYGLGLEK 424 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 + + + F G + D T A +L + +I++ TQ+++KG +F + Sbjct: 425 VFEEIKNKFKGYNADILSSDLTEY-NAFSDKLKNIEENKTKIIVATQIVSKGFNFKHLNC 483 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 + ++ D A D RS+E+ QL Q++GRAGR K+ ++ LQT ++ + ++L Sbjct: 484 IVAVNCDSAFLGNDIRSSEKNYQLLYQLSGRAGRFNKKSKIFLQTFDDKNNIFESLKKFN 543 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 D F ++ + R LPP+ + + N+ H + QL+ + P +E + + Sbjct: 544 SDNFYKKEIDFREYSNLPPFYKFISIVVSGKNSFHVEKYAVQLKQTL---P-KNEFIEIY 599 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 GPV A+ K +R+++L+++ +V Q I L L +P + +K +DVDP+ Sbjct: 600 GPVSAVISKIKSDYRFRLLIKYNPKVTPQAQIKKKLELA-QLP--KNLKLQVDVDPL 653 >UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XU37_DESMR Length = 792 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 241/792 (30%), Positives = 354/792 (44%), Gaps = 74/792 (9%) Query: 6 VALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VAL P Y +P+G + G R+ VP G+ R+G+V A+ P L+ Sbjct: 7 VALTTPPFSVLTYAVPDGFALADFPVGLRLLVPVGRTL-RVGVVAGCGVAAP-PGVTLRP 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ----------GRPAAN 112 + L+ P+ L A + +G +L LP LR G P A Sbjct: 65 ALWPLERAPLCDAGYLELAASLASRHMATVGRILGAILPRGLRSAKVVFTCRAAGLPKAL 124 Query: 113 APMWYWFAT--------------------EQGQAVDLNSLKRSPKQQQALAALRQGKIWR 152 W + E G++ L L SP A +Q + Sbjct: 125 TATALWRKSSDERLELAPAWRDGTMACRLEAGESDPLCCLAASPPWPVRPGAAKQVAVLD 184 Query: 153 DQVATLEFNDAALQALRKK---GLCDLASETPEFSDWRTNYAVSGERLR----------- 198 A + AL L+ K G L E R + +++ Sbjct: 185 ---ALCDAGPMALSELKAKLGPGTLPLVRRLAELGLVRIEELETAAQVQPAETSAAVALP 241 Query: 199 -LNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 L EQA A+ ++ A D+ +A L+ GVTGSGKT +Y+ ++ L +G+Q L++ PE+ Sbjct: 242 PLTDEQAAAMDSLLPALDSPDGAARLVYGVTGSGKTRLYMELVRRTLERGRQVLLLAPEV 301 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSA--WLKAKNGEAAIVIGTRSALFTPFKN 313 L + F + G A W AIV GTRSAL P ++ Sbjct: 302 ALAEKLHRAACRAFPEVGPAFYHGYQSPALREALFWRCGGGSPPAIVAGTRSALLLPLRD 361 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 LG+IV+DEEHD ++KQ++ Y A+++ +RA +LGSATP ++T Q Sbjct: 362 LGLIVLDEEHDGAFKQEDRLPYQAKEVGFFRARQSGALFVLGSATPDVKTFHAAQSGHVP 421 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAG-------------LAPALITRMRQHLQADNQ 420 ++RL RR G ++D++G G L A + Q + Q Sbjct: 422 MVRLERRVGGGGMPRVEIVDMRGAAKLTGSAVNRETGDRVGVLTDASAAALAQTVAEGGQ 481 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 ++ LNRRG+AP L C DC CP CD T H+ + L CH+C RP P CP CG Sbjct: 482 AMILLNRRGYAPLLFCLDCETPVRCPHCDLSLTFHKDRERLVCHYCGHARPHPSPCPGCG 541 Query: 481 STHLVPVGLGTEQLEQTLAPLFPG-VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 T +P+G+G E LE+ LA + P ++R+DRD R LA+ G +R+L+GT Sbjct: 542 GTSFLPMGVGAEMLEEQLAGVLPAEAAVARLDRDVARRPEEARAVLADFAAGRSRVLVGT 601 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QML+KGHHFPDVTLV D D D+R++ER QL TQVAGRAGR + G V++QT Sbjct: 602 QMLSKGHHFPDVTLVIAADADLGRNLPDYRASERAFQLLTQVAGRAGRGERPGRVLIQTR 661 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 PE P +L Y+ F ++ L+ RR + PP+ +VR + L Sbjct: 662 MPEDPFFGYVLRGDYEGFFDEELSRRRRLCYPPFVRLGLVRLSFPRDYEEGYALAAAAGE 721 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + A +LGP PA GR R L++ P ++ + A T+ + Sbjct: 722 AMRRSAAAVGARLLGPAPAPLALVAGRRRLHCLIKSPDWPGVRQVFA---AGAKTLEKAD 778 Query: 720 KVKWVLDVDPIE 731 KV+ LD+DP++ Sbjct: 779 KVRCTLDLDPVD 790 >UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRX6_LAWIP Length = 792 Score = 311 bits (796), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 180/518 (34%), Positives = 285/518 (55%), Gaps = 10/518 (1%) Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +LL G+TGSGKT +YL +++ + + LV+ PE+ L + + F L Sbjct: 278 TFLLFGITGSGKTAIYLEIIQECIRNNQSVLVLAPEVALALKLQHEIKTVFPIIPCYLSH 337 Query: 279 GLNDSERLSAWLK--AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 G S++ + KN A ++IGTRSALF P N+G I++DEEHD+S+KQ E YH Sbjct: 338 GYQSSQQKEDLFRKIVKNQVAKVIIGTRSALFLPLTNIGSIILDEEHDASFKQGERLIYH 397 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL-TRRAGNARPAIQHVLDLK 395 A+++A +RA ++LGSATP ++T V+ K +++L +R G P I+ + + Sbjct: 398 AKEIAWFRAVQSNALLLLGSATPDIKTFHAVENNKISIVKLHSRVGGGVLPTIKLIDSQQ 457 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + A +T +++ L+ Q ++ LNRRG+AP + C C CP CD + H Sbjct: 458 LESKDVTFARESLTTLKETLEVGEQAVILLNRRGYAPIIYCITCRKSIRCPSCDVGMSYH 517 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG-VPISRIDRDT 514 + Q L CH+C P CP C T +P+G GTE++E+ + + P + R+D DT Sbjct: 518 KIQESLICHYCGKSIRFPCPCPFCKGTQFLPMGQGTEKVEEEIRAILPSDSMVLRLDYDT 577 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T R G E+ L +G +++LIGTQML+KGHHFP+VTLV +++ D L D+R+AE+ Sbjct: 578 TRRPGRTEEILKTFAQGKSQVLIGTQMLSKGHHFPNVTLVIVVNADIGLNIPDYRAAEKT 637 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL TQ AGRAGR K G+V++QTH H + + Y F + +A R+ PP+ Sbjct: 638 FQLLTQSAGRAGRGEKAGQVLIQTHDTSHYCWKFIQQHDYLGFYKYEIALRQKWLYPPFI 697 Query: 635 SHVIVR-AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 + ++R + + ++++++++L L + V GP + P GR R+Q LL Sbjct: 698 NLALIRLSYPIEWKEGKIWIKKVQSL-LQEWANKLNVSVRGPALSPIPILRGRNRFQCLL 756 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + QH I I T +K++ VLD+DPI+ Sbjct: 757 KSNN---WQH-IRTIFYKIQTTALPQKLRVVLDIDPID 790 >UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDF Length = 745 Score = 310 bits (795), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 250/742 (33%), Positives = 359/742 (48%), Gaps = 58/742 (7%) Query: 16 FDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 FDYLL G+ V+ G + VPF + + +G+VV ++ + +P +L A V+ EP Sbjct: 33 FDYLLGPGLEHVQVGTLLVVPFAGR-DVLGVVVELAGETGVPPEKLAAPRSVV--EPGVP 89 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF---------ATEQGQ 125 + L W D Y L LP P A AT+ G+ Sbjct: 90 AELVALARWITDEYCSTPARALGLVLP-------PGAGRATRPRVRTRRVLVAEATDAGR 142 Query: 126 AVDLNSLKR-SPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 A + +R +PKQ++ L L G + Q + L+ L +GL L Sbjct: 143 AALADGGQRLTPKQREVLETLAAAGPLPATQTGG---DHGGLRRLADRGLLQLEQRE--- 196 Query: 184 SDWRTNYAVSGER-----LRLNTEQATAVGAIHSAADTFSA--------WLLAGVTGSGK 230 R +A G R RL EQ A+ I +A + +LL GVTGSGK Sbjct: 197 QRRRPVHAAVGARNGAAPPRLTAEQIAALEPIVAALEAGDGALSPADRRFLLHGVTGSGK 256 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL L G+ +V+VPEI L PQT+ARF+ RF V VLHS L ER W+ Sbjct: 257 TEVYLQAAAAALRAGRNVIVLVPEIALAPQTVARFQARFGDTVAVLHSQLGQGERYDEWM 316 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + + GEA I +G RSA+F P ++G++++DEEH+ +YK + RY AR +A RAH Sbjct: 317 RLRRGEARICVGPRSAVFAPLADVGLVIVDEEHEPAYKHEGDPRYDARRVAARRAHDAGA 376 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITR 410 ++ GSATP E++ RL L R G P ++ +LD++ + L P Sbjct: 377 VLLSGSATPRPESV----HALRRLRILRRVDGRPLPPVE-ILDMR--DARHPLHPVTREA 429 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + +A + I+ +NRRG++ L C CG + CP CD LH++Q + CHHC Sbjct: 430 LGDVRRAGRKAIVLVNRRGWSNFLSCRSCGRVWNCPECDVALVLHRSQRAVSCHHCGHSE 489 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF--PGVPISRIDRDTTSRKGALEQQLAEV 528 VPR CP CGS L G GTE++EQ L P P+ R+D DTT+ KGA+ + L + Sbjct: 490 RVPRTCPDCGSVSLARHGAGTERIEQELIEAIGDPAFPVFRLDADTTATKGAIAKALGQF 549 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 A +L+GTQ++AKGH FPDVTL +LD D L DFR+ ER L Q+AGRAGR Sbjct: 550 DAAPAGVLVGTQIVAKGHDFPDVTLGVVLDADQTLRFPDFRAEERTFSLVAQLAGRAGRG 609 Query: 589 G-KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G V++QT + P + D F L R +++ PP+ S + V + Sbjct: 610 QHGDGRVLVQTLATDAPSIVAAARHDSDGFLAGELGRREILRYPPFASLIRVVCSAPDAA 669 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A + L+ +P A VLGP P + G+ R Q++++ R + Sbjct: 670 DAHAAADAVARLV-DAPGA----TVLGPAPLF--RLRGKERSQLVIKATQRRAAVQSVAA 722 Query: 708 TLALINTIPDSRKVKWVLDVDP 729 + + P R+V DVDP Sbjct: 723 AVDAVARTPVGRRVSLSADVDP 744 >UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospirillum sp. Group II RepID=A3EQU2_9BACT Length = 661 Score = 304 bits (778), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 186/498 (37%), Positives = 270/498 (54%), Gaps = 16/498 (3%) Query: 214 ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 AD FS +L GVTGSGKT +Y + ++ ++ +Q L++ PEIGL PQ E F+ V Sbjct: 149 ADQFSITVLRGVTGSGKTRLYQEMAKHTFSRDRQVLLLTPEIGLVPQ----LEEAFSGLV 204 Query: 274 E---VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 V+HS + +RLS+W+ GE ++V+G RSA F+P +LG+I++DEEHDS+Y+ Sbjct: 205 PRMGVIHSQITPMKRLSSWMSILRGEMSLVVGPRSAFFSPLTHLGLIIVDEEHDSAYQAW 264 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQ 389 EG ++ R+LA+ A QIP++LGSATP E+L +Y LL L RR G++ P I Sbjct: 265 EGLSFNVRNLALKYAQLRQIPVVLGSATPLAESLYYAGSHRYTLLSLPRRIHGSSLPEIT 324 Query: 390 HVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 + +K+ +L+ + Q L+ Q ++ LNRRG+AP L C C + C +C Sbjct: 325 LTAPSRKEKI---FPSSLLGEIDQTLKDGEQTVILLNRRGYAPLLQCLTCKNVLMCKKCS 381 Query: 450 HYYTLHQA-QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 LH+ L CH C S+ P C CG T L GL T++ E L+ FP + Sbjct: 382 VRLVLHKKPTRQLVCHLCASRFNPPDHCSECGGTFLSEDGLATQKAEDLLSFHFPNARVI 441 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 R+D+DT SR+ + +E A ILIGTQM+AKGH F VTL +L++D AL D+ Sbjct: 442 RLDQDTRSREHSSRTPFSETE---ADILIGTQMIAKGHDFRRVTLGIVLEMDQALSLPDY 498 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 RS ER QL Q+AGR GR G V L T P+ PL Q L D F + L ER+ Sbjct: 499 RSEERVFQLVLQLAGRVGRHRPGGRVHLVTAKPDLPLYQYLKNYDQDGFIQHVLRERKAF 558 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 PP+ ++ + + + L L + E + +LGPVPA K +R Sbjct: 559 GYPPFGRIALLTLSSKDEKTLLEIVSSLDRLWRAG-HDTEGVSLLGPVPAPVYKAKLYYR 617 Query: 689 WQILLQHPSRVRLQHIIN 706 +Q L++ S ++ I+ Sbjct: 618 YQYLIKSSSIEKIHSAID 635 Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 1/84 (1%) Query: 29 GCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 G RVR+P GK+ E +G + + + S LK V+E+LDS PV + + +++ +Y Sbjct: 31 GTRVRIPLGKR-EIVGFIWNATPPSPQKKLTLKPVLEILDSYPVLPPCLHPIYEFSSWFY 89 Query: 89 HHPIGDVLFHALPILLRQGRPAAN 112 P+G +L + LP L + P ++ Sbjct: 90 RLPLGLLLRNTLPQPLAKPLPLSS 113 >UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND9_FERNB Length = 775 Score = 303 bits (775), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 192/621 (30%), Positives = 313/621 (50%), Gaps = 36/621 (5%) Query: 126 AVDLNSLKRSPKQQQALAAL-RQGKIWRDQV-ATLEFNDAALQALRKKGLCDLASETPEF 183 +++L+ LK + Q + L +G +Q+ L+ + L+ KG+ ++ + +F Sbjct: 175 SIELSKLKLTVSQSTVVNYLLFKGPTEVEQIIEDLDVKKDVVVQLKNKGIIEILEQCSDF 234 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAA-DTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + +R+ L+ EQ + V I S L+ G TGSGKTEVYL V+E L Sbjct: 235 ETLN----IKPQRVILSDEQKSIVDKILSYDFRKEKKHLVFGPTGSGKTEVYLEVIEKYL 290 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 G L +VPE+ LT QTIAR R+RF + + V HS L +S+R+ W KA GE I++ Sbjct: 291 PFG-NVLYLVPEVSLTEQTIARLRKRFPDLSIAVYHSYLTESKRVEIWAKAVKGEINILV 349 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSA F P KNL + ++DEEHD Y Y ++ I ++ GSATP+L Sbjct: 350 GPRSAAFVPLKNLNLAIVDEEHDEGYYNNSEPFYEIHTFL----NALPITVVYGSATPSL 405 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 E+ + +Y +LT+R P ++ V K +KV ++ L + + L+AD Sbjct: 406 ESYKKAKDGEYVFHKLTKRYNVELPEVEIVDMNKTKKVTFSISEILYNNLSKVLEADKSA 465 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 I+F R+GF+ + C CG+I +C CD T H ++L+CH C S++ + CP+CGS Sbjct: 466 IIFTRRKGFS-RVQCAVCGYIVKCEHCDVAMTYHLDSNNLKCHICGSEKELSLNCPNCGS 524 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 + G G+E++E+ L LFP I RID + L++ L + G I+ GT+M Sbjct: 525 NMFIDRGTGSEKVEKELQQLFPSRNIGRIDAEIADTPEKLKKLLDYLREGKIDIVAGTKM 584 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 + KG + L+ ++DVD + D + R QL QV GRAGR ++G+ ++QT+ P Sbjct: 585 ITKGLDIYRIALIGVVDVDALISYPDINAPLRTFQLLVQVIGRAGR-NEKGKAIIQTYKP 643 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 P++ + + F E+ L R+ + PP+ S V++ + N + A + + + I Sbjct: 644 TDPVITFASNQDVEGFYERELEIRKQLNYPPFASVVVLTYANLNQEIARETIDTVADEIE 703 Query: 662 SSPLADEK--------LWVLGPVPALAPKRGGRWRWQILLQH---PSRVRLQHIINGTLA 710 + ++K L +LGP K ++R+QI + P VR Sbjct: 704 NIEKKEKKVQEVYKYYLELLGPSEHPIFKANNKYRYQIFFKTNNVPELVR---------- 753 Query: 711 LINTIPDSRKVKWVLDVDPIE 731 L+ I + +W++ V+P E Sbjct: 754 LLKKIISNYSGEWIIKVNPNE 774 >UniRef50_Q2NIR1 Primosomal protein N' n=3 Tax=Candidatus Phytoplasma RepID=Q2NIR1_AYWBP Length = 813 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 187/557 (33%), Positives = 303/557 (54%), Gaps = 21/557 (3%) Query: 149 KIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVG 208 +I R + L N +RKK + + + + +++ LN EQ + Sbjct: 238 EITRKKALELTSNSIIQSLIRKKLILQTEKKISIILNHNFDLLAEDKKIILNEEQKQILQ 297 Query: 209 AIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER 268 I+ + +LL G TG+GKTE+YL ++ VL Q KQ L++VPE+ L + R + + Sbjct: 298 KIN--INYHKTYLLHGKTGTGKTEIYLHLITKVLNQNKQVLLLVPELMLIAPLMQRLQAK 355 Query: 269 FNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSY 327 F + +LHS L+ E L +LK K +A IV+GTRSA+F P NLG+I+IDEEH+ + Sbjct: 356 FTKKNIAILHSYLSPKEHLDQFLKIKEQQAYIVLGTRSAIFAPLNNLGIIIIDEEHEEAL 415 Query: 328 KQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARP 386 ++E Y AR LA RA +IP+ILGSATP+LE+ V Q+ Y+LL LT+R + P Sbjct: 416 IEKERATYDARILAQIRAKYHKIPLILGSATPSLESHYQVLQQNYQLLSLTKRVLIDDFP 475 Query: 387 AIQHVLDLKGQKVQAGLAP---ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIA 443 I+ ++D+K + + L P L +++ + Q ILF+N +GFAP +LC CG++ Sbjct: 476 PIE-LVDMKEELKKGNLEPFSQNLKNALKEVIAKQQQAILFINTKGFAPFVLCRFCGFVP 534 Query: 444 ECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFP 503 +C +C++ T + Q L+C HC+ + ++C C + VG+G E +E + F Sbjct: 535 KCHKCNNSLTFYLKQELLKCSHCNYKEQFTKKCRRCSKEQIKEVGVGIEYIEAYIKKEFL 594 Query: 504 GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGAL 563 + + D DT ++ E+ + ++ A IL+GTQM+AKG F VTLV +L D L Sbjct: 595 HARLIKFDSDTITKISQYEKLWNDFNQEKADILLGTQMIAKGLDFHKVTLVGILMADSLL 654 Query: 564 FSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALA 623 F+ +E+ QL Q AGR GR +QG+V++Q+++ +H + + F + L Sbjct: 655 KIPSFKGSEKTFQLIIQAAGRCGRK-EQGKVIVQSYNVDHFAINAAVKYEEKGFLRKLLE 713 Query: 624 ERRMMQLPP--WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD---EKLWVLGPVPA 678 ER+M Q PP + S +++ +D + + LA+ +K+ VLGPV + Sbjct: 714 ERKMSQNPPFGYLSQILISHKDFKKTFNIAYR-------IKGALANRFSQKITVLGPVLS 766 Query: 679 LAPKRGGRWRWQILLQH 695 L PK+ R+R + L++ Sbjct: 767 LIPKKNNRYRCLLTLKY 783 >UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQE1_9DELT Length = 778 Score = 300 bits (767), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 194/575 (33%), Positives = 293/575 (50%), Gaps = 18/575 (3%) Query: 164 ALQALRKKGL---CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIH-SAADTFSA 219 ALQAL+ K L C E PE +G+ + EQ A+ + F A Sbjct: 211 ALQALQDKELVCPCKPGDE-PEGGSLE-----AGQDFCFSPEQKEALKHLSPRLRQGFGA 264 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 LL G+TGSGKT VYL + L G+ A+++ PEI + Q + R+ LH G Sbjct: 265 CLLHGITGSGKTLVYLDLARQSLEMGRSAILLAPEIAIARQLYQQARQYLPGAAIYLHHG 324 Query: 280 LND-SERLSAWLK-AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHA 337 S + +++ + + ++IGTRSALF P ++ G+IV+DEEHD S+KQ + Y A Sbjct: 325 SKGPSSKEKTFVELGQEKKPVLLIGTRSALFMPVQDTGLIVLDEEHDESFKQDQTLIYQA 384 Query: 338 RDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ 397 +++A Y A E+ ++LGSATP ++T Q L+ + R G + +DLK Sbjct: 385 KEIAWYLASREEALLVLGSATPDVKTFHAAQAGHVSLVEMHSRIGKSTLPQVDFVDLKND 444 Query: 398 K-VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 V +A +++ ++ Q ++ NRRG++P L+C C +C C T H+ Sbjct: 445 PPVFGAMAKTCAEALKETVKRGEQAVIMHNRRGYSPVLMCESCSETVKCANCQVGLTYHK 504 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 ++ L CH+C P C C + +PVG GTE++E+ LA P + R+DRD+T Sbjct: 505 KRNRLVCHYCGISVSFPPVCRHCRGSEFIPVGQGTEKVEEFLARHLPDTQVLRLDRDSTR 564 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 G E+ L + +G ARIL+GTQML+KGH FP+VTL +LD D L D+RS+ER Q Sbjct: 565 SPGKAEKILQDFAQGQARILVGTQMLSKGHSFPEVTLAIVLDGDLGLGLPDYRSSERIFQ 624 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L Q++GR+GR K G V +QT +P H Q + Y F +Q ++ R+ PP+ Sbjct: 625 LLVQLSGRSGRGEKPGRVFIQTRNPGHFCWQYIRDCDYKGFFQQEISRRQKFGYPPFVRL 684 Query: 637 VIVRAEDHNNQHAPL-FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 ++R + FL LR + A K+ +LGP PA+ + R R Q L++ Sbjct: 685 GLIRFSFPDTWEGKADFLAGLRKKAKQAA-AVSKVTMLGPAPAVLSRLKNRERHQFLVKS 743 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 I L L R+V+ LD+DP+ Sbjct: 744 SD---WAGIKQAYLELRPLFERYRQVRASLDLDPV 775 >UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGK8_9BACT Length = 648 Score = 298 bits (762), Expect = 6e-79, Method: Compositional matrix adjust. Identities = 186/542 (34%), Positives = 283/542 (52%), Gaps = 24/542 (4%) Query: 195 ERLRLNTEQATAVGAIHSA-ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 + L LN Q + I+S+ D FS L+ GVTGSGKTE+++ + + V+A+GKQ L +VP Sbjct: 116 KELTLNEAQLSVYNGIYSSLKDGFSTHLVHGVTGSGKTEIFIELAKKVIAEGKQVLYLVP 175 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI LTPQ R R V HS +R A+ G +++G RS+LF P K Sbjct: 176 EISLTPQLENRLSARMGFDVLSYHSKKTPKKRKEAFWSFSAGTLPMMLGARSSLFVPAKE 235 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 +G+I++DEEH+SSYKQ E Y RD++V +IP+IL SATP+LE+ N + KY Sbjct: 236 IGLIIVDEEHESSYKQDEIPSYQLRDMSVLYGKILKIPVILASATPSLESWANAKSGKYL 295 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAP 432 + R P IQ ++D+K ++ G L+ L + + + QVIL +NR+G++ Sbjct: 296 YHSIPCRPDTDMPEIQ-IVDMKEEEPIGGILSIPLYDAIYETINRGEQVILLINRKGYSH 354 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 L C CG I C C T +++ + +C++C + P+ C CGS + G GTE Sbjct: 355 TLYCRKCGNIINCSNCSVAVTYYKSTNTCKCNYCSQEVRRPK-CLHCGSDDITDYGAGTE 413 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++ + L F I R+D + L + L G I+ GTQ++AKG F +VT Sbjct: 414 KVAEVLETAFEK-KILRLDTENVKSYKKLSEMLKSFEDGEYPIMAGTQLVAKGLDFGNVT 472 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 L ++++D DFR+ ER QL Q+AGRAGRA K+G VV+QT PE L + L Sbjct: 473 LAGIINIDNMFTLPDFRANERAYQLLLQLAGRAGRADKKGRVVIQTAMPELDLFKRL--D 530 Query: 613 GYD-AFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL---ADE 668 D F E +A R++ PP+ + H + A ++ L+ + L D Sbjct: 531 CLDTTFYEMEMARRKLFNYPPFYKMCRITL-SHTKEEA---VKDAAFLVYDTLLRFKNDA 586 Query: 669 KLWVLGPVPALAP--KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 +++ PA AP K R+R+ I+++ P L +I A NT+ D+ K + Sbjct: 587 EVF----YPAQAPIYKIQNRFRYGIIIKSPLNSELSKLIR---AAANTLKDNAKTTLRIK 639 Query: 727 VD 728 +D Sbjct: 640 ID 641 >UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ36_9BACT Length = 673 Score = 296 bits (757), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 177/487 (36%), Positives = 259/487 (53%), Gaps = 21/487 (4%) Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 F+ +LL GVTGSGKT +Y + + L++G LV+ PEIGL + R + E + Sbjct: 169 FAPFLLRGVTGSGKTRLYQEMAKTALSEGSSVLVLTPEIGLVAPLLEAMRA-ISPLAEGI 227 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HS +ER A+ + +G +V+G RSALF+P LG+I++DEEHD SY+ EG ++ Sbjct: 228 HSAQTKAERTRAFARILSGRVPVVVGPRSALFSPLSRLGLIIVDEEHDPSYQAYEGLSFN 287 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLK 395 AR+LA+ RA IP++LGSATP +++ +V +Y L L R G + PAI + Sbjct: 288 ARNLAIRRAQDLGIPVVLGSATPLSDSIFHVSSGRYHGLSLPGRIGGRSLPAIHLIPSGS 347 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 G P R+ L Q ++ LNRRG+ P LLC C CP C H Sbjct: 348 GSSPLPDPVP---ERIAASLDRGEQSVILLNRRGYVPTLLCRSCHTTLSCPSCAVRLVFH 404 Query: 456 QA-QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 + + CH C S VP CP+C L G T++LE+ L FPG I R+D D+ Sbjct: 405 KVPDRRMICHSCASSYAVPSLCPTCLGRDLELRGTATQKLEEILGKHFPGARIIRLDADS 464 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 +++LA G IL+GTQ++AKGH P VT +L+ DG L D+R++ER Sbjct: 465 AQDG---QERLAAFREGEGDILVGTQVVAKGHDLPKVTYGVVLETDGMLAFPDYRASERA 521 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 L Q+AGR GR + G+V + T P++P+L +AF ++ L ERR++ PP+T Sbjct: 522 FGLILQLAGRVGRHREGGQVDIVTRDPDNPVLGWARDYNQEAFYKETLDERRLLGYPPFT 581 Query: 635 --SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL--WVLGPVPALAPKRGGRWRWQ 690 + VI+ + AP+ L SP + GPVPAL PK R+R Q Sbjct: 582 RLASVIL----SSTHEAPI----REALAERSPFGKFPAGNGIFGPVPALPPKLKNRYRAQ 633 Query: 691 ILLQHPS 697 ++++ P+ Sbjct: 634 VVIKGPT 640 >UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID=B9LA69_NAUPA Length = 601 Score = 290 bits (742), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 163/509 (32%), Positives = 262/509 (51%), Gaps = 33/509 (6%) Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 W+ N + ++L +Q A+ + +L G TGSGKTE+Y+ ++E VL G Sbjct: 99 WKINNVKTD--IKLTDKQQEALKFLKKN----DVSVLFGDTGSGKTEIYIKLIEEVLNDG 152 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 +Q L ++PEI +T Q R ++ F + + HS + ++ GE IV G RS Sbjct: 153 QQVLFLLPEIAITSQMEKRLQKYFGEALAIWHSKITKKKKQQILSGIAKGEIKIVAGARS 212 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF P +NLG+I++DEEHD SYK ++ +Y+A+DLAVY +ILGSATP + L Sbjct: 213 ALFLPLENLGLIIVDEEHDDSYKSEQTPKYNAKDLAVYFGKIYDAKVILGSATPLISDL- 271 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 K+ RL N + K + ++ +I +++ ++ + QVI+FL Sbjct: 272 ----YKFPHFRLKGTFYNTK---------KTRYFRSTFDDFIIQKIKDTIEKNKQVIIFL 318 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 R ++C +CG +C CD ++H+ + L CH+C+ +P C CGS + Sbjct: 319 PTRANFKYMICAECGKAVKCKHCDVAMSVHKNKRALVCHYCNYSMHIPSSCEYCGSEEFI 378 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 +GT + + L +FP I + DRD + K +++ L ILIGTQML+KG Sbjct: 379 NERMGTSEFLEVLKGIFPDAVIEKFDRDVITSKSRVDKLLKRFANKEIDILIGTQMLSKG 438 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H +PDV L +LD+D L SAD+R+ ER L QV GRAGR + GEV++QT +PE Sbjct: 439 HDYPDVALSIVLDIDFVLNSADYRAGERAFALARQVEGRAGRK-EDGEVIIQTLNPE--- 494 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 + Y+ F ++ + R+ + PP+ + + +D + A + + I + P Sbjct: 495 ---FFDRSYEEFYDEEIQNRKELGYPPFNRLIKIEFQDKDKIKAKEKMDRFLRCIGNRP- 550 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 ++G A K +R+Q+LL+ Sbjct: 551 -----EIVGSGEAPIFKIKNIFRYQVLLK 574 >UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B0S8N3_LEPBA Length = 650 Score = 283 bits (725), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 185/538 (34%), Positives = 282/538 (52%), Gaps = 18/538 (3%) Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV-MVPEIGL 257 LN Q A I + LL G+TGSGKTEVYL ++ ++L + K +++ +VPEI L Sbjct: 124 LNEAQKKAYTEIKQNTHA-NTHLLYGITGSGKTEVYLHLMRDILQEPKGSVIFLVPEISL 182 Query: 258 TPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVI 317 T TIAR F V VLHS L SE+ +L K G+ I IGTRSA+F P +L ++ Sbjct: 183 TYPTIARIEAIFPNQVAVLHSHLRISEKFQNYLDLKEGKKRICIGTRSAIFAPLSDLKLV 242 Query: 318 VIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 V+DEEHD+SYK+ RYHAR +A+ R ++LGSATP++E + + L Sbjct: 243 VMDEEHDASYKENGSPRYHARQVALQRILKTGGKLLLGSATPSIELYYLAKSGQIGFSIL 302 Query: 378 TRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 +RA N + + V Q + ++ L ++ L+ Q+IL LNRRG+ P + Sbjct: 303 EQRA-NPKAKLPFVEMSDKQDDKHLISGDLQFKISDRLKKKEQIILLLNRRGYNPFIFSP 361 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 CP+C H Q +RCH C + G L G GT++LE+ Sbjct: 362 QTKEFVHCPKCTATLCYHSDQT-VRCHLCGYHSNFYNLKQTFGED-LELFGAGTQKLEEY 419 Query: 498 LAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALL 557 L FP I R+D+D++ K L ++ G IL GTQM++KG + +VTLV +L Sbjct: 420 LLSHFPSARIERLDQDSSKNKDVTRLVLEKLGEGELDILTGTQMISKGLDYANVTLVGIL 479 Query: 558 DVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAF 617 + + L DFRS+ER L +QVAGRAGR K GEV++Q++ PEHP+L+ + Y AF Sbjct: 480 NANHGLGVPDFRSSERTYALVSQVAGRAGRGEKPGEVIIQSNDPEHPVLKMAKEQNYPAF 539 Query: 618 AEQALAERRMMQLPPWT--SHVIVRA--EDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 E L R+ + PP+ + ++ R+ E+ N+ + ++ + ++ ++ + +L Sbjct: 540 FEWELQFRKDLFYPPFARLARLVFRSKYEEVANKQSVVYGELIKE------KKEDSIVML 593 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 GP K +R+ ILL+ S L++++ T T K D+DP+E Sbjct: 594 GPSQCPFYKIDNNYRYHILLKAKSITALRNLLKETK---QTFKLDSKCYIEYDLDPME 648 Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 6/90 (6%) Query: 14 RTFDYLLPEGMT-VKAGCRVRVPF-GKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 +T Y +P +T ++ G RV VP GK+ + G+V+ + + P E +V++ +D EP Sbjct: 16 KTLTYEIPNSITALQPGVRVLVPLNGKEWD--GVVIQIHNNE--PNYETLSVLKQIDPEP 71 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 V T L W ++ Y +G+ LF +P Sbjct: 72 VITTEQLELATWMSENYLSSLGEALFLMVP 101 >UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID=C5ZWD1_9HELI Length = 594 Score = 281 bits (718), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 183/549 (33%), Positives = 271/549 (49%), Gaps = 59/549 (10%) Query: 198 RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGL 257 L+ +Q A+ I+S + LL G TGSGKTE+Y+ ++ L Q K AL+++PEI L Sbjct: 88 NLSPKQIQALDFINSHQSS----LLFGDTGSGKTEIYIHLINQTLKQSKNALLLMPEISL 143 Query: 258 TPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVI 317 TPQ R F + HS L+ +R + NGE I+ G RS+LF P +LG+I Sbjct: 144 TPQMEKRLYAVFGDILAFWHSKLSSKKRKEILKRLHNGEIRILAGARSSLFLPLDHLGLI 203 Query: 318 VIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 +IDEEHD +YK RYH RD+A+Y A I I+LGSATP T +Q Sbjct: 204 IIDEEHDDAYKSTSAPRYHTRDVALYLAKKTNIKILLGSATPLANTYYKFKQ-------- 255 Query: 378 TRRAGNARPAIQHVLDLKGQKVQAG-----------LAPALITRMRQHLQADNQVILFLN 426 Q V LKG Q+ L P ++ ++++LQA Q I+FL Sbjct: 256 ----------TQSVFRLKGTYYQSKKEFLFCHSSDELHPFVLQNLKENLQAHKQSIVFLP 305 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 R LLC+ CG +CP C +LH + L+CH+C P+P CP CG T L Sbjct: 306 TRANFKHLLCNTCGNNIQCPNCSVSMSLHSKESSLKCHYCHYTSPIPESCPICGGT-LSS 364 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 + +GT++ L+ P I+ DRD+ + + L + L + ILIGTQML+KGH Sbjct: 365 LRIGTQEFANHLSKELPNANIACFDRDSITTQKKLTETLKNFNHHKIDILIGTQMLSKGH 424 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 + +V L L +D L +D+RS E+ L Q++GR+GR + G+V++QT L Sbjct: 425 DYHNVALSVALGLDYILKGSDYRSREKALALMFQLSGRSGRK-ENGKVIIQT-------L 476 Query: 607 QTLLYKG----YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 Q ++ Y+ F ++ L R + PP+ +++ H Q + + IL Sbjct: 477 QEDFFRNYLDDYELFLQEELTFREHL-YPPFMRLALIKV-SHKKQETAIIIINDILTILK 534 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 D K+ ++G A K +WR+ ILL R + ++ L I IP Sbjct: 535 QNKTD-KIEIVGYGIAPIEKIANKWRYVILL----RSKETKALHQMLLKIKNIP------ 583 Query: 723 WVLDVDPIE 731 +D+DPIE Sbjct: 584 CEIDIDPIE 592 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriacea... 1082 0.0 UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=G... 892 0.0 UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organis... 886 0.0 UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteri... 881 0.0 UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacter... 876 0.0 UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter... 876 0.0 UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacter... 873 0.0 UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-... 847 0.0 UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID... 843 0.0 UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix or... 842 0.0 UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=... 837 0.0 UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter tur... 836 0.0 UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs repli... 833 0.0 UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacter... 832 0.0 UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacter... 831 0.0 UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromo... 831 0.0 UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacter... 827 0.0 UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-sup... 824 0.0 UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrer... 822 0.0 UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisph... 821 0.0 UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=S... 820 0.0 UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Th... 820 0.0 UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria... 818 0.0 UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aero... 817 0.0 UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis... 817 0.0 UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadale... 815 0.0 UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Ma... 815 0.0 UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum a... 814 0.0 UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs repli... 813 0.0 UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylop... 811 0.0 UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbea... 809 0.0 UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514... 809 0.0 UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 ... 808 0.0 UniRef50_Q21H75 Transcription elongation factor GreA / replicati... 806 0.0 UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4... 805 0.0 UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanel... 804 0.0 UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candida... 803 0.0 UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Ps... 803 0.0 UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine ... 800 0.0 UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID... 800 0.0 UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus caps... 798 0.0 UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea... 794 0.0 UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbioba... 792 0.0 UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia mucini... 792 0.0 UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius the... 790 0.0 UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium Re... 789 0.0 UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus n... 787 0.0 UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae R... 785 0.0 UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oe... 785 0.0 UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadens... 784 0.0 UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-supe... 784 0.0 UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella gryl... 784 0.0 UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=ce... 783 0.0 UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Ca... 782 0.0 UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum therm... 781 0.0 UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-sup... 777 0.0 UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=G... 776 0.0 UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae ... 775 0.0 UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44... 775 0.0 UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia Re... 775 0.0 UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkal... 773 0.0 UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatu... 773 0.0 UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria... 773 0.0 UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium... 772 0.0 UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacter... 772 0.0 UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gamma... 771 0.0 UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulfo... 770 0.0 UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ... 769 0.0 UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucom... 769 0.0 UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferrug... 766 0.0 UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacte... 766 0.0 UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus Re... 765 0.0 UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae R... 765 0.0 UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassi... 763 0.0 UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=... 762 0.0 UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obsc... 761 0.0 UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachl... 760 0.0 UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Su... 760 0.0 UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=... 759 0.0 UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6... 758 0.0 UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=... 757 0.0 UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RI... 756 0.0 UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (... 756 0.0 UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB... 756 0.0 UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepI... 755 0.0 UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus ... 754 0.0 UniRef50_UPI00016C01EC Primosomal protein N (replication factor ... 753 0.0 UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminoc... 751 0.0 UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacter... 751 0.0 UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=L... 751 0.0 UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacteri... 750 0.0 UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosi... 749 0.0 UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamo... 748 0.0 UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio s... 747 0.0 UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Ma... 747 0.0 UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobi... 746 0.0 UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus h... 744 0.0 UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas auran... 740 0.0 UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdema... 737 0.0 UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotro... 737 0.0 UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Ba... 736 0.0 UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID... 733 0.0 UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum varia... 732 0.0 UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacte... 731 0.0 UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepI... 730 0.0 UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=... 730 0.0 UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4... 727 0.0 UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepI... 726 0.0 UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C... 723 0.0 UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales R... 723 0.0 UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae ... 723 0.0 UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termiti... 722 0.0 UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae Rep... 722 0.0 UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminoco... 722 0.0 UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostri... 721 0.0 UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii... 721 0.0 UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales Re... 720 0.0 UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerof... 717 0.0 UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonel... 716 0.0 UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium cu... 715 0.0 UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae ... 714 0.0 UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna Re... 714 0.0 UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistip... 713 0.0 UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID... 713 0.0 UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID... 712 0.0 UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacte... 712 0.0 UniRef50_C3XBI2 Primosomal protein N' directs replication fork a... 710 0.0 UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulos... 708 0.0 UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID... 707 0.0 UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepI... 705 0.0 UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N5... 703 0.0 UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides Re... 703 0.0 UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae Re... 701 0.0 UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii ... 700 0.0 UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marin... 700 0.0 UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID... 698 0.0 UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacr... 696 0.0 UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collins... 696 0.0 UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimo... 693 0.0 UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae... 692 0.0 UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 T... 691 0.0 UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED... 690 0.0 UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae Re... 690 0.0 UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=C... 689 0.0 UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Ac... 688 0.0 UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteri... 688 0.0 UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum ... 688 0.0 UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus a... 687 0.0 UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae ... 687 0.0 UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium cap... 687 0.0 UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa... 687 0.0 UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepI... 687 0.0 UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachysp... 685 0.0 UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM... 684 0.0 UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=... 682 0.0 UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Sy... 681 0.0 UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhu... 681 0.0 UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidat... 680 0.0 UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n... 680 0.0 UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flu... 680 0.0 UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacteriu... 679 0.0 UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bactero... 678 0.0 UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2... 678 0.0 UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacter... 676 0.0 UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale... 675 0.0 UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales... 675 0.0 UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparin... 675 0.0 UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL... 674 0.0 UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton tha... 674 0.0 UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio al... 673 0.0 UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria Rep... 672 0.0 UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacter... 671 0.0 UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodf... 671 0.0 UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleo... 668 0.0 UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacter... 667 0.0 UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales... 665 0.0 UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacteri... 664 0.0 UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Poss... 663 0.0 UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinen... 662 0.0 UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio sale... 661 0.0 UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferr... 660 0.0 UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia ... 659 0.0 UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacter... 657 0.0 UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication fac... 657 0.0 UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepI... 656 0.0 UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candida... 654 0.0 UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochrace... 654 0.0 UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae Re... 654 0.0 UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rub... 653 0.0 UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacte... 650 0.0 UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacter... 650 0.0 UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteri... 650 0.0 UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobac... 649 0.0 UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bact... 649 0.0 UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber... 648 0.0 UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7... 644 0.0 UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter ther... 643 0.0 UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysan... 641 0.0 UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=1... 640 0.0 UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes Rep... 638 0.0 UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes Rep... 638 0.0 UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-sup... 637 0.0 UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2... 636 e-180 UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=... 636 e-180 UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribac... 635 e-180 UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=De... 634 e-180 UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospir... 633 e-180 UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Po... 633 e-179 UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechoc... 632 e-179 UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 629 e-179 UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium ro... 629 e-178 UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincenti... 628 e-178 UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite... 627 e-178 UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Mo... 626 e-178 UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aura... 625 e-177 UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fu... 622 e-176 UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gin... 622 e-176 UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphen... 621 e-176 UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacif... 618 e-175 UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis ... 615 e-174 UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magn... 614 e-174 UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepI... 613 e-174 UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=... 612 e-173 UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Ph... 612 e-173 UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexiba... 609 e-173 UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independen... 606 e-171 UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae Rep... 604 e-171 UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organism... 604 e-171 UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium p... 602 e-170 UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=B... 600 e-170 UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacteriu... 599 e-169 UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugam... 596 e-169 UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PR... 595 e-168 UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acet... 593 e-168 UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B... 584 e-165 UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus mo... 582 e-164 UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium n... 574 e-162 UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobact... 574 e-162 UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succin... 572 e-161 UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagib... 569 e-160 UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae R... 562 e-158 UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospiril... 554 e-156 UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonp... 554 e-156 UniRef50_C3XEQ9 Primosome assembly protein PriA n=1 Tax=Helicoba... 552 e-155 UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID... 545 e-153 UniRef50_Q7VFX4 Primosomal protein N' n=3 Tax=Helicobacter RepID... 535 e-150 UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID... 534 e-150 UniRef50_Q2NIR1 Primosomal protein N' n=3 Tax=Candidatus Phytopl... 531 e-149 UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum fer... 531 e-149 UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, ... 530 e-149 Sequences not found previously or not previously below threshold: >UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriaceae RepID=PRIA_ECOLI Length = 732 Score = 1082 bits (2799), Expect = 0.0, Method: Composition-based stats. Identities = 732/732 (100%), Positives = 732/732 (100%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL Sbjct: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA Sbjct: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET Sbjct: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN Sbjct: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV Sbjct: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA Sbjct: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ Sbjct: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG Sbjct: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ Sbjct: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH Sbjct: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI Sbjct: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK Sbjct: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 Query: 721 VKWVLDVDPIEG 732 VKWVLDVDPIEG Sbjct: 721 VKWVLDVDPIEG 732 >UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=Gammaproteobacteria RepID=A1SYK9_PSYIN Length = 753 Score = 892 bits (2305), Expect = 0.0, Method: Composition-based stats. Identities = 363/738 (49%), Positives = 503/738 (68%), Gaps = 11/738 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGM-----TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + +AL +PL + FDYLLP+ + GCRVRVPFG +++ IG++ V+ + + Sbjct: 16 ICRIALAIPLHKQFDYLLPDYLLKTEPNNLVGCRVRVPFGGKRQLIGVICEVNPKCDYAI 75 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++LK + +++D P+ ++W LL WAA YY + GDV ALP LRQG+ A + Sbjct: 76 DKLKKITQLIDQTPLLDKNIWSLLRWAAFYYQYAFGDVFQQALPSSLRQGKEAIFKGYEH 135 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T +LN KR+ KQQ AL L + + Q++ + L+AL++KG+ + Sbjct: 136 WQLTAN--PFNLNDFKRAQKQQSALQILSESSLSNQQLSAQGISRPTLKALQEKGVIESV 193 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 + P + +W + S ++ L EQA A+ ++ + F+ +LL G+TGSGKTEVYL+ Sbjct: 194 DKQPVSNLNWLAQFEESAQKPALTVEQAIAISCVNQQLEAFNCFLLEGITGSGKTEVYLN 253 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +++ VL GKQALV+VPEIGLTPQTI RF+ RFN PV + HSGLN E+L WL AK G Sbjct: 254 IIKPVLLAGKQALVIVPEIGLTPQTIKRFQARFNVPVYLKHSGLNPREQLDTWLHAKQGS 313 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AI+IGTRS++F FKNLG+I++DEEHD+S+KQQ+G+RYHARD A+ RA ++IPIILGS Sbjct: 314 GAIIIGTRSSIFCDFKNLGLIILDEEHDASFKQQDGFRYHARDFAIKRAALQKIPIILGS 373 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LETL N Q KY+ L LT R GNA+P +++L G +++GL+P LI M++HL Sbjct: 374 ATPSLETLNNALQGKYQHLHLTERPGNAKPPTNSLINLAGLPLKSGLSPQLIELMKKHLD 433 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 +NQVILFLNRRG+AP L+CH+CGW+ +C RCD +YT H++ ++L CHHC S PVP QC Sbjct: 434 KNNQVILFLNRRGYAPVLMCHECGWLVKCGRCDAFYTYHKSANYLHCHHCASTLPVPHQC 493 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 CGST L G+GTEQLE+TL LFP P RIDRD T +K + Q L +++ G +IL Sbjct: 494 DDCGSTQLNSTGVGTEQLEETLNDLFPDHPTVRIDRDNTRKKESFNQYLTDINSGKYKIL 553 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLVAL+DVDGALF D+R++ER AQL+TQV+GRAGRA K+G+VVL Sbjct: 554 LGTQMLAKGHHFPDVTLVALIDVDGALFCNDYRASERLAQLFTQVSGRAGRAEKKGQVVL 613 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTHHPEH LLQ L+ GY F+ AL ER++ QLPP T ++RAE N A FL Sbjct: 614 QTHHPEHSLLQDLINNGYFEFSRNALQERKLAQLPPSTFQALLRAESDNATLAENFLSLC 673 Query: 657 RNLILSSPLAD---EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 + ++ + + +KL +LGP+PA +R G++R+Q+LLQ R + I++ L + Sbjct: 674 QQILQQICINNNSLDKLLILGPIPASMERRAGKYRFQLLLQSEQRAVITQILHRALHAFD 733 Query: 714 TIPDSRKVKWVLDVDPIE 731 +P+ RKV+W +DVDPI+ Sbjct: 734 NLPEGRKVRWSIDVDPID 751 >UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organisms RepID=PRIA_HAEIN Length = 730 Score = 886 bits (2290), Expect = 0.0, Method: Composition-based stats. Identities = 379/737 (51%), Positives = 502/737 (68%), Gaps = 15/737 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLPR FDY +P+ ++++ G RV VPFG Q+ R+ IV S++P ++L Sbjct: 1 MKIVRVALAVPLPRLFDYFVPDDVSLQIGMRVLVPFGTQK-RVAIVADFPTKSDVPEDKL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+++ LD P+FT W L WAA+YY +GDVLF ALP+ LR G A +W Sbjct: 60 KAILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALPVKLRNGESAVKNDRTFWRI 119 Query: 121 TEQGQ-AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T+ G+ A+ LKRS KQ +AL L + + + +F+ A AL+ KG + + Sbjct: 120 TDAGKNALKQGELKRSKKQAEALQYLSETDLEK---GNNDFSSAIWSALKAKGFIEEITI 176 Query: 180 TPEFSDWRTNYAVSG-----ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 W+ + RL LN +QA A + + F+ WLL GVTGSGKTE+Y Sbjct: 177 QTNPLSWQQRLGNNPIVNAENRLTLNKQQALAFSQLLFHSG-FNVWLLDGVTGSGKTEIY 235 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L +E +L GKQ LV+VPEIGLTPQT+ RF+ RFN ++VLHS L D++RL W +A++ Sbjct: 236 LQYIEEILKSGKQVLVLVPEIGLTPQTVQRFKVRFNVEIDVLHSNLTDTQRLYVWDRARS 295 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G++AIVIGTRSALFT F NLG I++DEEHDSSYKQQ+ WRYHARDLA+ A I +++ Sbjct: 296 GQSAIVIGTRSALFTQFSNLGAIILDEEHDSSYKQQDSWRYHARDLAIVLAQKLNISVLM 355 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LE++ NVQ KY+ L L++RAGN+ V+DLK Q +Q GL+ L+ RM+ H Sbjct: 356 GSATPSLESINNVQNGKYQHLVLSKRAGNSTALRHFVIDLKNQNIQNGLSKPLLERMKAH 415 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ NQV+LFLNRRGFAP LLCH+CGWIA+CP C+ YT HQ Q+ LRCHHC +Q+ +PR Sbjct: 416 LEKGNQVLLFLNRRGFAPVLLCHECGWIAQCPHCEKPYTYHQHQNVLRCHHCGAQKTIPR 475 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QC CGSTHLV GLGTEQLE+TL LFP ++RIDRD+TSRKG LE L ++ +G ++ Sbjct: 476 QCGDCGSTHLVTTGLGTEQLEETLKTLFPHYSVARIDRDSTSRKGKLEGYLEDIQQGKSQ 535 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 ILIGTQMLAKGHHFP+VTLVAL++VD ALFS DFR+ ER AQLY QVAGRAGRA KQGEV Sbjct: 536 ILIGTQMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQGEV 595 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 VLQTH+P+HPLL TLL GY AFA++ L R M LPP+T +++A+ ++ A L Sbjct: 596 VLQTHYPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALIKAQARHSDLAENCLS 655 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 Q+ + S + L +LGP+PA K+ G++RWQ+LLQHPSR+ LQ + Sbjct: 656 QIADFFQSKQIT--GLQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTLQKALREYQQA--E 711 Query: 715 IPDSRKVKWVLDVDPIE 731 + + +V+ +LDVDP + Sbjct: 712 LEKNSQVRLILDVDPQD 728 >UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteria RepID=A4VH03_PSEU5 Length = 798 Score = 881 bits (2276), Expect = 0.0, Method: Composition-based stats. Identities = 374/736 (50%), Positives = 489/736 (66%), Gaps = 9/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDYL P G T ++ G R+RVPFG++ E IG++V +SD SE+PL + Sbjct: 63 ILRLALPSPLRRLFDYLPPHGATAGSLQPGMRLRVPFGRR-EVIGVLVELSDQSEVPLEK 121 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ +E+LDS P S+++L LW A YY H +GD L ALP+LLRQG PA YW Sbjct: 122 LRPAIELLDSTPPLPPSLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARLERYWR 181 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQG--KIWRDQVATLEFNDAALQALRKKGLCDLA 177 E G D L R+P+Q++ L + Q + + L+ N +L L +KGL + Sbjct: 182 LAE-GANPDDPRLARAPRQRETLKIIAQHAHGLPHALLGKLQLNKDSLDLLLEKGLVRVE 240 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S + + L LN +Q A AI + F A+LLAGVTGSGKTEVYL + Sbjct: 241 SRRSSPPRQHSGSWLLQAELTLNAQQRAAFEAISAGLGGFQAFLLAGVTGSGKTEVYLQL 300 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VLA GKQALV++PEI L PQT+ARF +RFNA + +LHS +ND ERL AWL A++GEA Sbjct: 301 IHRVLAAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNINDRERLDAWLAARDGEA 360 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 I+IGTRSALFTP KN G+I+IDEEHD+SYKQQEG RYHARDLA+ RA E +PI+LGSA Sbjct: 361 DIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLGSA 420 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L N +Y LL+L++RAGNA+ LD+K + + AG++ L + Q L A Sbjct: 421 TPSLESLHNAHSGRYALLKLSQRAGNAQQPRFLRLDVKSRPLDAGISGPLQQAIGQTLAA 480 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+++LNRRGFAP LLCHDCGW+++C RCD TLHQ + LRCHHC PR CP Sbjct: 481 GQQVLVYLNRRGFAPTLLCHDCGWLSQCQRCDARMTLHQRHNELRCHHCGHVERPPRNCP 540 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG L PVG GTE+ E+ L LFP P+ RIDRD+T+RKGA+E+ ++RG +L+ Sbjct: 541 DCGKVDLRPVGAGTERAEERLGVLFPDYPVLRIDRDSTARKGAMEKMFTTINRGDPCLLV 600 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQL QVAGRAGRA + G+V++Q Sbjct: 601 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 660 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH +HPLL L +GY AFAEQAL+ERR LPP++ ++RAE A FL + Sbjct: 661 THLADHPLLVQLTDQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDEAC 720 Query: 658 NLILSS--PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 L + L + +LGPVPA +R GR+R Q+LLQ +R L +++ + L+ + Sbjct: 721 TLAEQTFGQLQLSGIELLGPVPAPMERRAGRYRAQLLLQGNARAALHRLMDAWVPLLEQL 780 Query: 716 PDSRKVKWVLDVDPIE 731 P R V+W LDVDPI+ Sbjct: 781 PGGRAVRWSLDVDPID 796 >UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacteria RepID=A6VDH1_PSEA7 Length = 739 Score = 876 bits (2264), Expect = 0.0, Method: Composition-based stats. Identities = 372/736 (50%), Positives = 480/736 (65%), Gaps = 10/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDY P G+ ++ G R+ VPFG++ E IG+++ V+D SE+P ++ Sbjct: 5 ILRLALPSPLRRLFDYRAPRGIPRSALQPGIRLLVPFGRR-EMIGVLIEVTDRSEVPEDK 63 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK + VLD++P + L W A YY H +GD L ALP LLRQG PA +W Sbjct: 64 LKPALRVLDAKPPMPAHLLELCRWTAQYYQHSLGDSLSWALPNLLRQGEPAEARQQRFWH 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLA 177 A EQ ++D L R+P+Q+QALA L+Q + + + LE N +L L++KGL +L Sbjct: 124 AVEQS-SLDDPRLARAPRQRQALAILKQHPHGVSHELLNQLEINKDSLDLLKEKGLVELE 182 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + R ++ L LN EQ A A+ ++ +F +LLAGVTGSGKTEVYL + Sbjct: 183 VRRHN-TPPREGGWLAQAELPLNPEQRAAFEAVRASHGSFHCFLLAGVTGSGKTEVYLQL 241 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + LA G+QALV++PEI L PQT+ARF RFNA + +LHS L D ERL AWL A++GEA Sbjct: 242 IRETLAAGRQALVLIPEINLGPQTLARFERRFNARIALLHSALTDRERLDAWLAARDGEA 301 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IVIGTRSALFTP K G+I++DEEHD+SYKQQ+G RYHARDLA+ RA E +PI+LGSA Sbjct: 302 DIVIGTRSALFTPLKRPGLIIVDEEHDASYKQQDGLRYHARDLALVRARLENVPILLGSA 361 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TPALE+L N Q +Y LLRLT+RAG A+P LD+K + AGL+ L + L A Sbjct: 362 TPALESLHNAQAGRYGLLRLTQRAGGAQPPKFIRLDVKSMPLDAGLSRPLQQAIGDTLAA 421 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV++FLNRRGFAP LLCHDCGWI++CPRCD T+HQ LRCHHCD ++ P CP Sbjct: 422 GQQVLVFLNRRGFAPTLLCHDCGWISQCPRCDARMTVHQGSGELRCHHCDHRQRPPMNCP 481 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG L PVG GTE+ E+ L LFP P+ RIDRD+TSRK A+ A ++ G IL+ Sbjct: 482 QCGKLDLRPVGAGTERAEERLRILFPHHPVLRIDRDSTSRKHAMRDLFATINSGEPCILV 541 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQ QVAGRAGRA + G V++Q Sbjct: 542 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQQIVQVAGRAGRAEEPGRVLIQ 601 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH +HPLL L GY AFAEQAL+ERR LPP+ ++RAE H A FL Sbjct: 602 THLADHPLLVQLTEDGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEAFLDSAC 661 Query: 658 NLILS--SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + ++ +LGPVPA +R G+ R Q+LLQ SR L ++ L + + Sbjct: 662 GAAEQLLEQIGGPEVELLGPVPAPMERRAGKHRAQLLLQCMSRAPLHRLLAPWLQALEQL 721 Query: 716 PDSRKVKWVLDVDPIE 731 P R+V+W LDVDPI+ Sbjct: 722 PGGRQVRWSLDVDPID 737 >UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter RepID=B0K293_THEPX Length = 732 Score = 876 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 252/742 (33%), Positives = 395/742 (53%), Gaps = 28/742 (3%) Query: 3 VAHVALPV---PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V + + R + Y +PEGM VK G RV VPF + G V+S++D + +++ Sbjct: 2 FAEVVVDIKSSNTDRVYTYRIPEGMNVKIGMRVSVPF-NNRFIEGYVISITDKASYSVDK 60 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + +LDS +F + L W DYY + L +P+ ++QG Sbjct: 61 IKDIHRILDSYSIFDEKMIELAKWMKDYYKCYFSEALQTIMPVGIKQGEKKVKVVKI--- 117 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKGLCDLA 177 + K++PKQ + L L+ R + V L + +++L+ KG ++ Sbjct: 118 ---NIDEIPSQLSKKAPKQYEILQYLKNRSPIRLSELVKVLNIDYGVIKSLQNKGYIEIY 174 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYL 235 E E + + L L EQ AV + + TF +LL GVTGSGKTEVYL Sbjct: 175 EE--EVLRFSVKDIEKTKPLLLTEEQQRAVEEVKRSILTGTFDKYLLFGVTGSGKTEVYL 232 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 +++ + GK A+V+VPEI LTPQTI RF RF V V+HSGL+ ER W K KNG Sbjct: 233 QLIDEAIKIGKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNG 292 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIIL 354 +V+G R+A+F PF NLG+I+IDEEH+++YKQ + +Y+A+++A R E+ +++ Sbjct: 293 LVDVVVGVRNAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIEKAVLVM 352 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 SATP+LET + +Y+L+RLT+R + P I+ V+++ + + L + + Sbjct: 353 ASATPSLETYYKANKGEYKLIRLTKRINVSMPQIE-VVNMSEELASGNTSIFSRKLFSYI 411 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +++L+ Q ILFLNRRG++ + C DCG++ +CP CD T H L CH+C + Sbjct: 412 KENLKRKEQTILFLNRRGYSSFVSCRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEET 471 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 + CP CGS + +G+GTE++E + FP + R+D DTT +KG+ E+ + G Sbjct: 472 MKDTCPKCGSKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNG 531 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A ILIGTQM++KG P+VTLV ++ D L DFRS+ER QL TQVAGRAGR K Sbjct: 532 KADILIGTQMISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKP 591 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G VV+QT+ +H + T + Y F + + R + + PP++ + + + Sbjct: 592 GRVVIQTYEDDHYSIVTAKQQNYVKFYNEEIKYREIFRYPPFSHLMNIVVSGEKEEEVKN 651 Query: 652 FLQQLR---NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 +++ +LGP PA K R+RWQ++L+ R I+ Sbjct: 652 TAVSTYLTCQKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDR----DILTEI 707 Query: 709 LALINTIPDSRKVKWVLDVDPI 730 I + S+ ++ +D+DP+ Sbjct: 708 AEEIQKMKYSKDIRIAVDIDPL 729 >UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacteria RepID=A8FQM3_SHESH Length = 742 Score = 873 bits (2255), Expect = 0.0, Method: Composition-based stats. Identities = 364/735 (49%), Positives = 504/735 (68%), Gaps = 10/735 (1%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP VALPVP+ + F Y +P+ ++ K G RV+VPFG+QQ IG+V +SD L Sbjct: 12 MPLFVEVALPVPMRQAFSYKVPDSISTLPKKGMRVKVPFGRQQ-LIGLVTGISDTCNLAP 70 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K++ E+LD EP+ S+++L WAA YY +G +L A+P+ LR+G ++ + Sbjct: 71 QQIKSIFELLDDEPLLPDSLYKLTAWAARYYFCSLGQMLSQAIPVALRKGAEISSNTTTF 130 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T+ G++ L++LKR+P Q++ + L +G++ +D++++L + +AL+AL ++ Sbjct: 131 WHLTQSGRSASLDTLKRAPAQKKVMEHLLKGELTQDEISSLALSKSALKALNERAWITQD 190 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 WR + + L LN EQA AV ++ + LL G+TGSGKTEVYL+ Sbjct: 191 ERVNSIDLSWREKLELDEDPLTLNPEQAIAVATLNQQTG-YHCTLLEGITGSGKTEVYLA 249 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +LE+VL++GKQAL++VPEIGLTPQTI+RF+ RF V V+HSGL D++RL+AW +AK GE Sbjct: 250 LLESVLSKGKQALILVPEIGLTPQTISRFKSRFKVQVAVIHSGLTDNQRLAAWQQAKTGE 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AAI+IGTRSALFTP GVI++DEEHDSS+KQQEG YHARDLAV R H E+IP++LG+ Sbjct: 310 AAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGT 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N +Y+ L L +RAGNA Q ++D+ Q + GL+ AL+ MR HL Sbjct: 370 ATPSLESLQNALSGRYKHLELGQRAGNAEKVRQGIIDISNQPLNTGLSHALLNEMRIHLD 429 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQV+LFLNRRGFAPALLCH+CG + EC RCD ++T+HQ+ +RCHHC + +P+QC Sbjct: 430 AGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNHYAIPKQC 489 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 +CGST L+ G+GTEQL L FP P+ RIDRDTTSRKGALE L +H+G +IL Sbjct: 490 HNCGSTMLMGQGVGTEQLANILEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKIL 549 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQV+GRAGRA K G V++ Sbjct: 550 VGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLM 609 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH ++P+L+ L++KGY FA L ER+ LPP +++RAE H A FL Q+ Sbjct: 610 QTHQADNPVLRELMHKGYGEFARGQLNERKQALLPPAWHMLLIRAEAHQALDADNFLSQV 669 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 L+ +E+ V+GP+PA K+ G++R ++ Q SR +LQH L I ++P Sbjct: 670 AELLPQ----NEESEVIGPMPAPMDKKAGKYRRHLIFQTKSRNQLQHAFEHALPQIESLP 725 Query: 717 DSRKVKWVLDVDPIE 731 +++ +W LD DP + Sbjct: 726 LAKRCRWSLDRDPQD 740 >UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA replication mode; also involved in double-strand break repair n=3 Tax=Alteromonadales RepID=Q3IJD8_PSEHT Length = 728 Score = 847 bits (2189), Expect = 0.0, Method: Composition-based stats. Identities = 354/738 (47%), Positives = 469/738 (63%), Gaps = 19/738 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM-----TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M VA+ VPLPRTFDY + + +K G RV VPFG Q++ + +V+++ +E+ Sbjct: 1 MYFVEVAIKVPLPRTFDYKVDSQLGEASAPLKPGMRVLVPFGNQRK-VAVVLALKTTTEV 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 P N++KA+ E++D P+ + LL + A YY +P+G+ + ALP LRQG + Sbjct: 60 PENKIKAIFEIIDDTPILSAEHIELLRFTARYYCYPLGETIHIALPSALRQGESPDKTSI 119 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLC 174 TE+G L ++ Q L L Q GK ++ L F+ + +L K L Sbjct: 120 NMVALTEKGA---LLPSLKAKTQLNLLKQLSQSGKSSLTELKALGFSKKTIDSLIDKALI 176 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + E + W++ G + LN EQA A I+ ++ FS++LL GVTGSGKTEVY Sbjct: 177 TQSIE--HDNHWQSVAPTVGSKPTLNKEQAVACTTINQSSG-FSSFLLEGVTGSGKTEVY 233 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAK 293 L LE VL +G+QALV+VPEIGLTPQT+ RFR RF P+ + HS L D+ERL W + Sbjct: 234 LQCLEEVLKRGEQALVLVPEIGLTPQTVNRFRRRFPDTPIMLWHSALTDNERLQTWRFCE 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 AIVIGTRS++F PF LG+IV+DEEHDSS+KQQ+ RYHARDLA YRA+ +IP+I Sbjct: 294 KASCAIVIGTRSSIFLPFLKLGMIVVDEEHDSSFKQQDTLRYHARDLAAYRAYQHKIPLI 353 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQ 413 LGSATPALETL KY+LL LT RA A +LD+KGQ QAG+A A + MRQ Sbjct: 354 LGSATPALETLHKAINNKYQLLSLTERAQTATDNQFKLLDMKGQPDQAGIAHASLATMRQ 413 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 HL+ QV++FLNRRGF+P L+CH+CGW++EC RC T H+A + CHHC Q VP Sbjct: 414 HLKRGKQVMVFLNRRGFSPTLICHECGWLSECKRCSTSATFHKAIGQMICHHCGDQYHVP 473 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 QCP CGST + P G GTEQ+E+ L+ FP P++RIDRD+T RKG+LE+ L E++ GGA Sbjct: 474 HQCPDCGSTQIFPNGKGTEQIEEFLSSEFPQTPVTRIDRDSTRRKGSLEKALDEINLGGA 533 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 RIL+GTQMLAKGHHF DV+LV +LDVD L+S DFR+ E AQL TQVAGRAGR+G+ G+ Sbjct: 534 RILVGTQMLAKGHHFADVSLVVILDVDSGLYSCDFRATEHLAQLVTQVAGRAGRSGEAGQ 593 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V+LQTH PEHPLLQ L+ GY FA AL ER LPP T+ IVRA+ HN + FL Sbjct: 594 VLLQTHFPEHPLLQDLVNNGYQDFARFALREREDADLPPITNMAIVRAQGHNIKQVVDFL 653 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 L + +LGP+PA K G +R+Q+ +Q R L + + ++ Sbjct: 654 TDLV-----PVSGVTGIQLLGPIPAPLEKVAGMYRFQLHIQAQDRRVLHQYLAQMVDYLS 708 Query: 714 TIPDSRKVKWVLDVDPIE 731 T ++KV+W LDVDPI+ Sbjct: 709 TSKLAQKVRWSLDVDPID 726 >UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID=PRIA_BACSU Length = 805 Score = 843 bits (2179), Expect = 0.0, Method: Composition-based stats. Identities = 264/804 (32%), Positives = 397/804 (49%), Gaps = 78/804 (9%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M A V + V + R FDY +P+ + +K G RV VPFG ++ + G V +V +AS+L Sbjct: 1 MNFAEVIVDVSTKNIDRPFDYKIPDHLKGMIKTGMRVIVPFGPRKIQ-GFVTAVKEASDL 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 +K V ++LD PV T + L W +D L LP L+ Sbjct: 60 SGKSVKEVEDLLDLTPVLTEELMILSSWLSDKTLSFKITALQAMLPAALKAKYEKELKIA 119 Query: 116 WYWFATEQGQAVDLN--------------------------------------------- 130 Q + + Sbjct: 120 HGADLPPQVERLFSETKTLLYSDIPDHETLKLIQRHVQKGDIDVTYKVAQKTNKKMVRHI 179 Query: 131 ----SLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRK-------------- 170 S + KQ + L A +Q I ++ E L K Sbjct: 180 QANASKEELAKQAEGLSRQAAKQQAILHFLISEPEGVKIPAAELCKKTDTSSATIKTLIQ 239 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGS 228 KGL + E ++ E L L EQ A I D+ +LL GVTGS Sbjct: 240 KGLLKESYEEVYRDPYQDKMFKKTEPLPLTDEQRAAFEPIRETLDSDEHKVFLLHGVTGS 299 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTE+YL +E VLA+GK+A+V+VPEI LTPQ + RF+ RF + V V+HSGL+ E+ Sbjct: 300 GKTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVMHSGLSTGEKYDE 359 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W K E +V+G RSA+F PF+NLG+I+IDEEH+SSYKQ+E RYHA+++A+ RA Sbjct: 360 WRKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYHAKEVAIKRAEHH 419 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAP 405 P++LGSATP LE+ Q+ Y LL L R + ++D++ + + Sbjct: 420 SCPVVLGSATPTLESYARAQKGVYELLSLKHRVNHRVMPEVSLVDMREELRNGNRSMFSV 479 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L+ ++ + + Q +LFLN+RG++ ++C DCG++ +CP CD T H+ L+CH+ Sbjct: 480 ELMEKLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMTYHRYGQRLKCHY 539 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + PVP CP C S H+ G GT+++E+ L + P + R+D DTTSRKGA E+ L Sbjct: 540 CGHEEPVPHTCPECASEHIRFFGTGTQRVEEELTKVLPSARVIRMDVDTTSRKGAHEKLL 599 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + G A IL+GTQM+AKG FP+VTLV +L D L DFRSAE+ QL TQV+GRA Sbjct: 600 SAFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEKTFQLLTQVSGRA 659 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR K G V++QT+ P H +Q Y+ F + +A RR PP+ +V Sbjct: 660 GRHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRREQSYPPYYYLALVTVSHEE 719 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 A + +++ + + ++ AD K +LGP + + R+R+Q ++++ +L ++ Sbjct: 720 VAKAAVTAEKIAHFLKANCGADTK--ILGPSASPIARIKDRYRYQCVIKYKQETQLSALL 777 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L + + V +D++P Sbjct: 778 KKILEHYKREIEQKHVMISIDMNP 801 >UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWS5_HALOH Length = 745 Score = 842 bits (2177), Expect = 0.0, Method: Composition-based stats. Identities = 251/745 (33%), Positives = 390/745 (52%), Gaps = 21/745 (2%) Query: 2 PVAHVALPV--P-LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A V + + P L R++DY +PE + + G V+VPFGKQ G + S + + Sbjct: 3 KYARVVVDIKAPGLNRSYDYKIPEDLENKISIGTAVKVPFGKQ-IITGFITGFSSQTRVE 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR--PAANAP 114 ++K ++ ++ EP+F S+ +L W A YY + +V+ A+P L G+ Sbjct: 62 SVKIKEIMNIISEEPLFDKSMLKLFAWVASYYKTYLINVIKIAIPTGLVSGKVGKIKKRY 121 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK----IWRDQVATLEFNDAALQALRK 170 + A E+ + V R+PKQ + L + T + + L + Sbjct: 122 VKLLLAEEEARRVIEKINTRAPKQALVVKVLMENDNIDYTVSKLAETAGTSPGTVYRLIE 181 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGS 228 KG + + + ++L Q + I + + +LL GVTGS Sbjct: 182 KGYLGYVKK-VKIRRPDLGEKEDVKPVKLTPVQKQVIEKIEDSIEKGVPDTFLLHGVTGS 240 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY++ + QGK +++VPEI LTP + RF +F V V+HS L+ ER Sbjct: 241 GKTEVYINTASRAVEQGKGVIILVPEISLTPLMVRRFYNKFGEQVAVMHSNLSLGERYDE 300 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + K G+A IVIG RSA+F+P +NLG+IVIDEEH++SYKQ E YHAR++AV R E Sbjct: 301 WRRLKEGKAKIVIGARSAVFSPVRNLGLIVIDEEHENSYKQGENPYYHAREVAVMRGKLE 360 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAP 405 ++LGSATP+LE+ ++ Y+ L L R R ++D++ + Q + Sbjct: 361 NASVVLGSATPSLESYYRARKGFYKYLSLPERINQERLPPVEIIDMRDELRQGNTSIFSR 420 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 +L + + L QVI+FLNRRG+A +LC +CG + +C CD T H + LRCH+ Sbjct: 421 SLRDAINKALSNKEQVIIFLNRRGYANFVLCRECGHVIKCNNCDISLTYHADEDLLRCHY 480 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 CD R P +CP CGS + G+GTE+L+ LA F G + R+D DTT+RKG+ + L Sbjct: 481 CDYTRGKPDKCPLCGSKLIKEFGIGTEKLQNELANEFVGARVDRLDVDTTTRKGSHHRIL 540 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 G IL+GTQM+AKGH +P+V++V ++ D L DFRS+ER QL TQVAGR Sbjct: 541 KRFEDGKTDILVGTQMVAKGHDYPNVSVVGVISADTILNLPDFRSSERTFQLLTQVAGRT 600 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR KQG V++QT++P+H +++ + + F + R + PP++ V + Sbjct: 601 GRGSKQGRVIIQTYNPDHYSIKSSSHHNFREFYRHEIRLRHALNYPPFSLLVNIIISGLK 660 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + Q+L N ++ + +LGP PA + ++RWQI+L+ S + H++ Sbjct: 661 EKIVVKKAQKLYNFLMQ--YNQQINEMLGPAPAPVYRLRKKYRWQIILKFKSYKKRNHVL 718 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 + R V ++DVDP+ Sbjct: 719 SELQKSF-LPDQGRNVNIIIDVDPV 742 >UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=A6W2U3_MARMS Length = 743 Score = 837 bits (2162), Expect = 0.0, Method: Composition-based stats. Identities = 337/736 (45%), Positives = 458/736 (62%), Gaps = 10/736 (1%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV----KAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 P VALPVP+ FDY +P+ + + K G RV+VPFGK R+G++V++S+ S+ Sbjct: 10 PFIKVALPVPMRTLFDYKVPKAIALRHALKPGMRVKVPFGKS-SRLGVIVALSETSDWDP 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K + + D PV T + L WAA YYHHPIGDV+FHALP+LLR+G A + Sbjct: 69 EQVKPLTSMHDQSPVITEELMALCEWAARYYHHPIGDVIFHALPVLLRKGESAEFRTENW 128 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT--LEFNDAALQALRKKGLCD 175 W T +GQA+ L L R+P+QQ L A++Q Q A L+ AA ++L +KGL Sbjct: 129 WLTTPEGQALPLEQLSRAPRQQDFLKAVQQHPNGLSQHAASVLDLAPAAGKSLEEKGLLR 188 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + + + LN EQ A + F+ LL GVTGSGKTEV+L Sbjct: 189 REPRSFNKGGEKHAHQTQVPP-TLNPEQMRATEHLLDYRHQFNVALLDGVTGSGKTEVFL 247 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 V+E ++ +GKQ LVMVPEIGLTPQT+ RF RFN + ++HS ++D ERL AWL A G Sbjct: 248 RVMERLIEEGKQILVMVPEIGLTPQTLKRFEIRFNTDIVLMHSNMSDRERLDAWLLAACG 307 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 A I+IGTRSA F P NLG+IVIDEEHD+SYKQ EG+RYHARDLA+ RA + IP++L Sbjct: 308 HAKIIIGTRSAAFIPAPNLGMIVIDEEHDTSYKQHEGFRYHARDLAIKRAQALNIPVLLA 367 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP+ E+L N QK++ L+L +RAGNA +DL+G+ + G + + M+ L Sbjct: 368 SATPSYESLTNALQKRFAWLKLRQRAGNAHIPEMERVDLRGKTLVHGFSEHALASMKLCL 427 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + QV++FLNRRG+AP L+CH CGWIA C CD T+H+ + L CHHCD+Q+ + Sbjct: 428 ERKEQVLVFLNRRGYAPTLMCHQCGWIAACDHCDVNLTVHKRANKLHCHHCDTQKALLHT 487 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C S L VG GTEQ+E L+ LF VPI RIDRD+T RK A+ + ++H I Sbjct: 488 CPECQSEELFTVGEGTEQIETQLSTLFKDVPILRIDRDSTQRKSAMAKLTQKIHEHDQAI 547 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQMLAKGHHFP+VTLV ++D D LFS+DFR ER AQL TQVAGRAGRA K G V+ Sbjct: 548 LIGTQMLAKGHHFPNVTLVIIMDADAGLFSSDFRGMERTAQLITQVAGRAGRAKKPGHVL 607 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQT+HP+H ++ L GY+ FA LAER+ + LPP+ VI+RAE N Q A L Sbjct: 608 LQTYHPDHAAIECLCNLGYEHFAIDGLAERKSLSLPPFYHQVIIRAESGNEQEAMQLLSA 667 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 +RN + P + ++++GP A+ ++ G+ R I ++ R L + Sbjct: 668 MRNDL--EPYFAKDVYLVGPYAAIIVRKAGQHRALISIKAAQRAPLHQATQMMTEWLEQS 725 Query: 716 PDSRKVKWVLDVDPIE 731 ++++ +DVDP+E Sbjct: 726 TKQHRIRFAIDVDPLE 741 >UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRK6_TERTT Length = 739 Score = 836 bits (2159), Expect = 0.0, Method: Composition-based stats. Identities = 343/735 (46%), Positives = 459/735 (62%), Gaps = 10/735 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 VALPVPL TFDY LP A GCRV V FG Q +GI++S S + Sbjct: 8 FISVALPVPLRNTFDYRLPTEADPTANYMGCRVAVNFG-HQAMVGIILSCHQTSTYDPAK 66 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + A +E+LD +P+FT + L WAADYY HP+G+ L A+P LRQG+ +A + W Sbjct: 67 IVAALEILDHKPLFTAELLNLCWWAADYYQHPLGETLSTAMPTPLRQGKSSAPT-LAAWQ 125 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ-VATLEFNDAALQALRKKGLCDLAS 178 T +G+ + +LKR+ KQQ AL L D L+ N + A++KKGL + Sbjct: 126 LTTEGKGLPETALKRAKKQQIALQYLLHNDFLLDADARKLDINSTTMAAMQKKGLVEKVE 185 Query: 179 ETPEFSDWR--TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 PE + + + L L EQ A+ + + ++ +LL G TGSGKTE YL Sbjct: 186 RVPEHQAPKDAADQLLRESPLALTEEQEAALSQL--SFHRYTCYLLEGATGSGKTEFYLQ 243 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + L GKQALV++PEIGLTPQT+ARF +RF V LHS ++DS+R + WL A++G Sbjct: 244 AIARTLQAGKQALVLIPEIGLTPQTVARFEQRFACSVAELHSNVSDSQRTNNWLAARDGR 303 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IVIGTR A P ++LG+I++DEEHD S+KQQ+G RY ARDL++YRA+ QIPI+LGS Sbjct: 304 ARIVIGTRLASLCPMQDLGIIIVDEEHDLSFKQQDGLRYSARDLSIYRANQLQIPIVLGS 363 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+ N ++ LRLTRRAG A+P +DL+G+ + AGL A + + + ++ Sbjct: 364 ATPSLESFYNAIHGRFAHLRLTRRAGAAKPPTISRVDLRGKTLTAGLCDASVAVLEKTIE 423 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q I+F+NRRG+AP+LLCH CGWIAECP CD TLH+A +HL CHHCD+Q+PV R C Sbjct: 424 RGQQAIVFVNRRGYAPSLLCHHCGWIAECPSCDANLTLHKAPYHLHCHHCDAQKPVNRHC 483 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P C S L P GLGTEQ EQ L FP PI RIDRD+T +K +L++ LA V G IL Sbjct: 484 PQCNSPDLNPRGLGTEQTEQWLEERFPDTPIIRIDRDSTRQKNSLQETLAVVKSGKPCIL 543 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 IGTQMLAKGHHFP++ LV + D D L SAD+R ER AQL QVAGRAGR G+V++ Sbjct: 544 IGTQMLAKGHHFPNIALVVIADCDQGLMSADYRGPERMAQLVIQVAGRAGRGEIPGQVLI 603 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 Q+H P+HPLL LL KGY FA Q L ER+ LPP+T ++RAE Q+A FL+ Sbjct: 604 QSHSPDHPLLDLLLTKGYHLFARQLLNERQTAFLPPFTHQCLIRAESKRPQNAIDFLKMA 663 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 R + S ++L LGP+PA + R+R+Q+ + SR LQ ++ + I+ Sbjct: 664 RQQLSSLMPPSQQLQYLGPIPARMERVNERFRYQLHITAGSRKALQKLLKEGIEKIDQQA 723 Query: 717 DSRKVKWVLDVDPIE 731 +R+ +W +DVDP E Sbjct: 724 LARRTRWSVDVDPQE 738 >UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=17 Tax=Acinetobacter RepID=B0VLQ8_ACIBS Length = 742 Score = 833 bits (2152), Expect = 0.0, Method: Composition-based stats. Identities = 327/736 (44%), Positives = 451/736 (61%), Gaps = 17/736 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASE--LPLNE 59 VA+PV L TFDY L + + G RV + FG+Q IGI+ D E + Sbjct: 14 VRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQN-LIGIITEKVDPQESFTGNFQ 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA-ANAPMWYW 118 LKA+ E+LD EP+ V LL W+A YY PIG+V+ ALP LLRQG+P +W Sbjct: 73 LKAISELLDDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKI 132 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ--VATLEFNDAALQALRKKGLCDL 176 + +A+ LKRS KQQ A L+ + + A L+AL+KKGL D Sbjct: 133 IPCDNAEAL----LKRSIKQQDAYQILKLHPAGTTENILNLSGVETATLKALQKKGLVDC 188 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 E +FS A L LN +Q A + +A + A+LL G+TGSGKTEVYL Sbjct: 189 TLEPHDFSPAPVQLAQMP--LTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGKTEVYLH 246 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 ++ VL QGKQ LV+VPEIGLTPQTI+RF+ RFN + +LHSGLNDS+RL AW +A+ G+ Sbjct: 247 IMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGK 306 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A+I++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR H + P++LGS Sbjct: 307 ASIILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVLLGS 366 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP++++ V+ K L+L +RAG+A H++DLK K Q G++ LI +++ L Sbjct: 367 ATPSIDSYHLVETGKLTALQLNQRAGHALLPKMHLIDLKIVKKQHGISQPLIEQIKNTLA 426 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQ 475 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P Sbjct: 427 RKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTVHRLPDH 486 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C L +G GT ++E+ L LFP + R+DRD+TSR G+ ++ + + I Sbjct: 487 CPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSI 546 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V Sbjct: 547 LLGTQMLAKGHHFPHVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVY 606 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQT P+HPLL TL+ K Y A A+Q LAER++ LPP+ V++RAE + + FL + Sbjct: 607 LQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVALLPPYRYAVLIRAESKDRDYTLHFLNE 666 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + +A + + GP+PA ++ GR+R +++ R RL + A + Sbjct: 667 AAEQLRQ--IAGGIVDIWGPIPAPMERKAGRYRAHMVILSADRTRLHFYLRQWWAQLVHA 724 Query: 716 PDSRKVKWVLDVDPIE 731 P +++ +DVDP E Sbjct: 725 PRQHQLRLSIDVDPQE 740 >UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR42_9GAMM Length = 744 Score = 832 bits (2149), Expect = 0.0, Method: Composition-based stats. Identities = 334/735 (45%), Positives = 471/735 (64%), Gaps = 11/735 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + VA+ PL RTFDYL+ + GCRVRV FGK+ E IG+V+ + S+ +++ Sbjct: 14 IVRVAVLSPLRRTFDYLVTDEFVAAPPQRGCRVRVSFGKR-EVIGLVIEQTHKSDFAIDK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA-NAPMWYW 118 LK VV V+D+EP+ S+++L +WAA+YYHHPIGD LF+ALP+ LR G+ +W Sbjct: 73 LKPVVAVIDAEPLLPESLFKLFIWAANYYHHPIGDALFNALPVRLRLGQSLPLPKVTKWW 132 Query: 119 FATEQGQAVDLNSLK--RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 T+ G+ L+ R KQ+ L L + + R + A LQ + +KG+ +L Sbjct: 133 RVTDTGKERGQEMLRGGRLHKQRALLDELSKKSLTRQGNILKFYTRATLQRIEEKGIAEL 192 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 P+ D + + + L LN Q A+ AI F+ WL+ GVTGSGKTE+YL Sbjct: 193 VCIGPQEVDL--DNLLLEQPLSLNPSQQEAMDAI--DCHGFNTWLIDGVTGSGKTEIYLQ 248 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +E V+ G+QALVM+PEI LTPQT RFR+RFN V ++HSGL D ERL +W +A G+ Sbjct: 249 CIEKVIRYGRQALVMIPEISLTPQTEKRFRDRFNVEVAMMHSGLTDQERLESWTEAATGQ 308 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AAI++GTRSA+FTP KN G+I+IDEEHD SYKQQ+G+RY ARDLAV RA E+IPIILGS Sbjct: 309 AAILLGTRSAVFTPMKNPGIIIIDEEHDQSYKQQDGFRYSARDLAVIRAKQEKIPIILGS 368 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N ++K+Y+ L L+ RAG+A+P ++DLK ++V++G+A + + +R+ + Sbjct: 369 ATPSLESLHNCEKKRYQHLILSTRAGDAQPPTWSMVDLKSEQVESGVAASTLNAIREAIH 428 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 QV++FLNRRGFAPA+LCH CG+ AECP CD T+H+ L CHHC+ +R + C Sbjct: 429 NKQQVLVFLNRRGFAPAMLCHYCGFCAECPNCDARLTVHRRHQRLICHHCNYKRGLLHWC 488 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 PSC +V G GTE+ E L FP P+ R+DRDTT +K A++ V G IL Sbjct: 489 PSCRGDRMVAAGDGTERSEAWLQECFPDTPVLRVDRDTTRKKNAMQAMYDTVDSGAPCIL 548 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHF ++TLVA+LD D LFS DFRS ER QL TQVAGR+GR G+V+L Sbjct: 549 VGTQMLAKGHHFANITLVAVLDADSGLFSPDFRSHERLGQLLTQVAGRSGRGKMAGKVIL 608 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 Q+H P+HPLL+ L + Y ++ +R+ +LPP+ ++VRA+ + Q+A FLQ Sbjct: 609 QSHQPDHPLLEVLTQQSYGEYSTLLRKQRKQAELPPFKQLILVRADAAHAQNAEAFLQSA 668 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 R + + E + LGP+PAL +R R R+ + + R L +++ + + +P Sbjct: 669 RQCAEAIFPSGETVNYLGPLPALMERRNSRHRYVLQISGGRRSDLNFLLSQLVFELEKLP 728 Query: 717 DSRKVKWVLDVDPIE 731 +R V+W +DVDP E Sbjct: 729 MARHVRWGVDVDPQE 743 >UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTM7_9GAMM Length = 731 Score = 831 bits (2148), Expect = 0.0, Method: Composition-based stats. Identities = 356/732 (48%), Positives = 462/732 (63%), Gaps = 17/732 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VA+PVPL FDY +P V +AGCR+++ FG + E IGI D +++ Sbjct: 9 RYVQVAVPVPLYGLFDYAVPADSRVPEAGCRLQLRFGHR-ELIGICCGTIDQPATAADKI 67 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + LDSEPV S+ LL A+ YYHHP+GDVL ALP L QGR W Sbjct: 68 REYQACLDSEPVIPASLMHLLQRASQYYHHPLGDVLATALPTALMQGRAVDEGGRSLWRL 127 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDAALQALRKKGLCDLA 177 T+QG+ L +L+R+PKQ+ +A LR+ + D A E ++++AL +K + Sbjct: 128 TQQGREEPLEALQRAPKQRAIVAVLRESDGYCDAGSLSARFENWRSSVKALIEKEWLEAI 187 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S PE S AV LN EQ AV + S FS LL GVTGSGKTEVY Sbjct: 188 SLPPERS------AVVRPGPELNEEQRAAVDGVPSE-QGFSTTLLRGVTGSGKTEVYFRW 240 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 +E LAQG+QALV+VPEIGLTPQ + RF +RF A + VLHSG+ D ERL +W A G A Sbjct: 241 IERCLAQGRQALVLVPEIGLTPQLLERFSQRFEANLVVLHSGMTDLERLRSWQLAAAGRA 300 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+GTRSALFTP LG+IVIDEEHD+S+KQQEG+RYHARDLA RA +E IP+ILG+A Sbjct: 301 HIVLGTRSALFTPMPALGLIVIDEEHDASFKQQEGFRYHARDLAALRAQAEAIPLILGTA 360 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+ E+ NV+Q +YR LRL++RAG ARP I ++D + + + L+ +L + QHL A Sbjct: 361 TPSFESHHNVRQGRYRELRLSQRAGGARPPIIRMVDARQHRSGSPLSHSLDRAVEQHLAA 420 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 NQV+LFLNRRG+AP L+C CGW ++C RCD + TLH LRCHHC S++ P CP Sbjct: 421 GNQVMLFLNRRGYAPTLICPQCGWHSDCERCDAHMTLHFQPSVLRCHHCGSEQRPPPHCP 480 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG +L G GTEQL L FP ISRIDRD+T RKG+LE +L +V RG +L+ Sbjct: 481 SCGHRNLQHQGQGTEQLTMFLEERFPEATISRIDRDSTRRKGSLEAELKKVQRGEVDMLV 540 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLV +LD D LFSADF++ E AQL QVAGRAGRA K GEV++Q Sbjct: 541 GTQMLAKGHHFPSVTLVGVLDCDRGLFSADFKATEHMAQLILQVAGRAGRADKPGEVLIQ 600 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + P+HPL+ L+ +GY+AF +QAL ER+++ LPP+ ++RAE + A FLQ L Sbjct: 601 STQPDHPLMHCLITQGYEAFTQQALKERQVLGLPPFGFAALLRAESVEREAAMRFLQSLC 660 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 D + LGP+P+ +R GR+R Q+LL +R L ++ G + I Sbjct: 661 -----PASPDGDVQWLGPIPSPMERRAGRYRAQLLLLSQNRKALHVVLAGLVHTIQQQGS 715 Query: 718 SRKVKWVLDVDP 729 + V+W LDVDP Sbjct: 716 IKNVRWSLDVDP 727 >UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromonadales RepID=B4RY99_ALTMD Length = 729 Score = 831 bits (2146), Expect = 0.0, Method: Composition-based stats. Identities = 345/735 (46%), Positives = 465/735 (63%), Gaps = 12/735 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL--- 57 M VA+PVPL + F Y ++AG RV VPFG ++ +G+VV SE + Sbjct: 1 MAFIQVAVPVPLRQLFTYT--HDSALEAGVRVMVPFGPRK-LVGVVVETLRKSESEIDNS 57 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N+LKA+ VLD +P+ + ++ W YYHH G+VL LP+LLR+G A P Sbjct: 58 NKLKAIEMVLDHQPIVDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAGPTPQDM 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 T++G+ SL R+PKQ AL + + + A +F A++AL +K L + Sbjct: 118 LMLTDEGKKTLSASLSRAPKQNACFTALTKRAMLAIE-ARKQFGAPAVKALVEKSLAVIK 176 Query: 178 SETPEFSDWR-TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 TPEF + E+ +TEQ+ A+ A++ F+ LL GVTGSGKTEVYL Sbjct: 177 EVTPEFKPGAWLSTLTMAEKPVPDTEQSVAIAALNRQHGNFAVSLLEGVTGSGKTEVYLQ 236 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +E +L +GKQ L++VPEIGLTPQT++RF +RF V VLHS L+D +RL W +AK GE Sbjct: 237 AIEPLLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKDRLQVWQRAKAGE 296 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 IVIGTRSA+FTP N G++++DEEHD S+KQQ+G RYHARDLA RA IP++LGS Sbjct: 297 LGIVIGTRSAIFTPLNNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGS 356 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATPALETL N +Y L+LT+RAG A+ QHVLD + Q + G++ L+T MRQH+ Sbjct: 357 ATPALETLNNALSGRYAHLQLTKRAGGAQSTHQHVLDARDQPIHYGISQGLLTIMRQHIS 416 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQV++F+NRRG+APALLCH CG C RC+ YT+H+AQ+ L+CHHC R +P C Sbjct: 417 AGNQVLVFVNRRGYAPALLCHHCGETVTCKRCERPYTVHKAQNRLQCHHCGGMRAMPTNC 476 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 +C LV G GTEQ+EQ LA LFPGV RID DT K L Q L ++R ++L Sbjct: 477 EACHYNELVTAGTGTEQVEQGLASLFPGVTQVRIDSDTVRGKDKLHQTLDAINRQEYQLL 536 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQ+L+KGHHFP VTLVA+LD DGALFSADFR+ E+ AQL TQ+AGRAGRA K GE+ L Sbjct: 537 VGTQILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWL 596 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH+P HPLLQ L++ GY FA AL ER+ LPP+ S ++RAE ++ A FLQ Sbjct: 597 QTHNPHHPLLQDLVHNGYGHFARHALMERKAASLPPFISQFVIRAEATDSSLAYRFLQDC 656 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + + + + + GP P L KR GR+R+ ++ H R L + + L + +P Sbjct: 657 KQVFTQAHA----IEISGPFPCLIEKRQGRFRFMLVCSHQKRAPLHNALRLALPFLQALP 712 Query: 717 DSRKVKWVLDVDPIE 731 + KV+W +D+DP + Sbjct: 713 QATKVRWSIDIDPTD 727 >UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacterales RepID=C6PE53_CLOTS Length = 735 Score = 827 bits (2137), Expect = 0.0, Method: Composition-based stats. Identities = 249/744 (33%), Positives = 392/744 (52%), Gaps = 31/744 (4%) Query: 3 VAHVALP---VPLPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A V L + R Y +P+ + +K G RV VP K G +++S+ E+P+ Sbjct: 6 FADVVLNEFSRNIDRILTYRVPDDIKNLKIGSRVLVPVNKSFVE-GYAINLSEKIEIPIE 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ++K ++ VLD VF + L +W DYY + + L +P ++ G Sbjct: 65 KVKPIMRVLDDFTVFDEKLLNLAIWMRDYYKCNLSESLQCIIPSGIKNGIKKVKKVTL-- 122 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDL 176 L+ +P+Q + L L+ + D V L + + + +L +KG+ + Sbjct: 123 ------NKGYLDDASITPRQFEILNYLKDNGTVLLSDLVKDLNISYSTVNSLARKGIICV 176 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVY 234 + E + + + ++L EQ + + + F +LL GVTGSGKTEVY Sbjct: 177 YYD--EVNRLKMSDYKKTDKLIPTKEQEFVINEVKHSIGRNVFEKYLLFGVTGSGKTEVY 234 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++E + +GK+++V+VPEI LTPQTI RF RF V VLHSGL+D ER W + KN Sbjct: 235 LQLIEKCIEEGKESIVLVPEISLTPQTIERFISRFGNLVAVLHSGLSDGERFDEWRRIKN 294 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPII 353 GE +V+G R+A+F PF N+G+I+IDEEH+++YKQ + +Y+ +++A R E+ ++ Sbjct: 295 GEVKVVVGVRNAIFAPFSNIGLIIIDEEHENTYKQSDFKPKYNVKEVAEKRCEIEKAVLL 354 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP +E+ + +Y+LL+L R G P + V+++ + + L Sbjct: 355 LGSATPQIESYYKALRNEYKLLKLKERIGLELPEVD-VVNMSRELADGNNSIFSRKLYKE 413 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 +R++L Q ILFLNRRG++ ++C DCG++ ECP CD T H + LRCH+C Sbjct: 414 IRENLMKGEQTILFLNRRGYSSFVMCRDCGYVPECPNCDISLTFHANESKLRCHYCGYNI 473 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 CP CGS + +G+GTE++E+ + LFP + R+D DTT KGA E+ E Sbjct: 474 NTVYVCPKCGSRRVRYLGIGTERVEKEVKKLFPRSRVLRMDIDTTKTKGAHEKIFNEFKN 533 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A ILIGTQM++KG P+VTLV ++ D L DFRS ER QL TQVAGRAGR K Sbjct: 534 GNADILIGTQMISKGFDIPNVTLVGVILADVTLNIPDFRSGERTFQLLTQVAGRAGRGSK 593 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G V++QT+ ++ + + + Y++F ++ + R PP+T + + Sbjct: 594 PGRVIIQTYEEDNYSIISAKNQDYESFYKEEIRYRETYMYPPFTHLLNIVVSGPIKNDVV 653 Query: 651 LFLQQLRNLILS---SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 + NLI + VLGP A + +RWQI+++ R LQ + Sbjct: 654 TCAASVYNLIYKTINKSVKKSYNKVLGPSSAPIERIKNNYRWQIIIKSSERAILQDVC-- 711 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 ++NT+ + +K D+DP+ Sbjct: 712 --DVLNTLKFHKGIKISFDLDPLN 733 >UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=2 Tax=Peptococcaceae RepID=A5D1C1_PELTS Length = 746 Score = 824 bits (2128), Expect = 0.0, Method: Composition-based stats. Identities = 259/741 (34%), Positives = 381/741 (51%), Gaps = 19/741 (2%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A V + + R F Y +P + G V VPFG + G VV Sbjct: 7 FAEVIVDLSSRNTDRVFHYAIPPDYRDKIAVGSMVTVPFGNRH-LTGYVVGFGIPPG--E 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +K + V+D PVFT + L W A+ Y + L L+ + Y Sbjct: 64 VRIKEIAGVIDEGPVFTPELLELARWMAENYLCSTAEAFARILSPRLQVKASRRADVLVY 123 Query: 118 WFATEQGQAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 L+ L RSPKQ L AA G + A + + AL KKGL Sbjct: 124 PALAGAEMEKALSLLGRSPKQLAVLQKAAGCPGLTKSELAAAAMTSSKTVDALLKKGLLK 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEV 233 +++ P + + L LN +Q A+ I ++ D F +LL G+TGSGKTEV Sbjct: 184 VSAVMPAYLQDAPGDMIKTGSLTLNQDQEAALREISASLDRGRFDVFLLHGITGSGKTEV 243 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL + L G+QA+ +VPEI LTPQ + FR RF V VLHS L+ ER W + K Sbjct: 244 YLRAIAAALETGRQAVALVPEISLTPQMVELFRGRFGGQVAVLHSALSGGERYQEWRRVK 303 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 G+A++V+GTRSA+F P G+ +IDEEH+ SYKQ + RYHAR++A+ RA ++ Sbjct: 304 EGQASVVLGTRSAVFAPCPRPGLFIIDEEHEPSYKQDDHMRYHAREIALKRAQLAGAVVV 363 Query: 354 LGSATPALETLCNVQQK-KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 LGSATP+LE+ Y+LL+L RR V+DL+ + + + L+ Sbjct: 364 LGSATPSLESFSRAVSGGPYKLLKLPRRVDERPLPRVRVIDLRQEIREGNRGIFSRPLLY 423 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + L+ Q ILFLNRRG++ ++C +CG + +CPRCD T H + LRCH+C+ Sbjct: 424 ALNGCLERGGQAILFLNRRGYSTVVVCRECGLVLKCPRCDISLTYHL-EGRLRCHYCNHL 482 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P CP CGS ++ G GT+++E+ +FP I R+D D+T++KG+ ++ L Sbjct: 483 AVLPGLCPGCGSRYIRHFGAGTQKVEEEARKIFPKARIVRMDSDSTAQKGSHQKILDAFR 542 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 G ILIGTQM+AKG P VTLV +++ D AL DFR+AER QL TQVAGRAGR G Sbjct: 543 DGLYDILIGTQMIAKGLDLPGVTLVGVINADTALHMPDFRAAERTFQLLTQVAGRAGRGG 602 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV++QT+ PEH + Y+ F +A RR++ PP++ + + + Sbjct: 603 LPGEVLIQTYSPEHYSISAAAAHDYEGFYRSEMAVRRVLGYPPFSHLARLLFTHEDEEEV 662 Query: 650 PLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 ++ + L+ + ++ +LGP PA K G +RWQ++L+ R ++ II Sbjct: 663 RKGAEKSKELLDRLVSGRNCRVEILGPAPAPLSKIKGHFRWQLVLKGRRRENIKEIIREG 722 Query: 709 LALINTIPDSRKVKWVLDVDP 729 LA + KV +D++P Sbjct: 723 LAELERDRRF-KVAVNVDINP 742 >UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W07_COLP3 Length = 736 Score = 822 bits (2125), Expect = 0.0, Method: Composition-based stats. Identities = 347/740 (46%), Positives = 461/740 (62%), Gaps = 16/740 (2%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP VA+PVP+ + F Y +PE + +K G RV V FG ++ IGIV+ + Sbjct: 1 MPEQYIQVAIPVPMRQLFTYRVPEALSSPAIKVGERVAVSFGPRKV-IGIVIDAQAQCDF 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 ++++K + L+ + S+ L A YYHHP+GDV ALPILLR+ +P Sbjct: 60 EISKVKDITTRLNDNFNLSQSLVSFLQLCAHYYHHPVGDVFQQALPILLRKIENITLSPP 119 Query: 116 WYWFAT--EQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKK 171 W A + + L L++ +Q AL + I ++ TL ++ A L AL+ K Sbjct: 120 MVWQAQCPSEDNSDLLAKLEKKAAKQFALYQIINNHNGISWVELRTLGYSKAQLNALQSK 179 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 L + W+ N +RL L++EQA V AI+ + FS L+ GVTGSGKT Sbjct: 180 ALIIEKEQVASQYTWQENTLNQADRLVLSSEQAIIVSAINHSLAQFSCHLIDGVTGSGKT 239 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL +E VLA +Q LV+VPEIGLTPQT+ RF +RFN P+ + HSGLND ERL+ WL Sbjct: 240 EVYLQSMEEVLANNQQVLVIVPEIGLTPQTLNRFEQRFNVPIALHHSGLNDKERLATWLS 299 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 A+ G AAIVIGTRSA+FTP LG+I+IDEEHDSS KQQ+ +RYH RD+A+ RA IP Sbjct: 300 AQQGSAAIVIGTRSAVFTPLHRLGLIIIDEEHDSSLKQQDSFRYHCRDMAILRARQLNIP 359 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 I+LG+ATP+ E+L N KY +L RAG + A ++D+ Q+V+ GL+ L M Sbjct: 360 IVLGTATPSFESLQNALSGKYSYHQLLNRAGKSNKAKIALIDMNQQQVEFGLSGTLKHEM 419 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +Q L QV+LFLNRRG+APA+ C +C W+AEC RCD YTLHQ Q L CHHC SQ+ Sbjct: 420 KQTLARGEQVLLFLNRRGYAPAINCQECHWLAECQRCDKPYTLHQKQQLLICHHCGSQKR 479 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 +P QCPSCGS + P+G GTEQLE L LFP I RIDRD+T +KG L + L EV Sbjct: 480 IPPQCPSCGSVRIAPLGQGTEQLESRLEELFPESSIVRIDRDSTRKKGELAKLLQEVTDK 539 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 ++L+GTQMLAKGHHFPDVTLVA+LDVDGALFS DFR++E+ AQL QVAGRAGRA K Sbjct: 540 KHQLLVGTQMLAKGHHFPDVTLVAVLDVDGALFSFDFRASEQMAQLLIQVAGRAGRASKP 599 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G+V++Q++ +HPLLQ L++ GY FA QAL ER+ LPP+T ++RA+ + + Sbjct: 600 GKVLVQSNFVDHPLLQDLVHNGYHHFAHQALTERKQALLPPFTFQALLRADANYPSYPEK 659 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 FL+ L L E GPVPA K+ G++R+ +++Q SR L I L Sbjct: 660 FLRALTQRRL------EGCEFAGPVPAAMEKKAGKFRYHLIIQAKSRKDLHRAILQLLIQ 713 Query: 712 INTIPDSRKVKWVLDVDPIE 731 I KV+W LD+DPI+ Sbjct: 714 IPNNEWQGKVRWSLDIDPID 733 >UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK13_9BACT Length = 735 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 271/740 (36%), Positives = 398/740 (53%), Gaps = 20/740 (2%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 MP A V + L +TFDY +P GM ++ GCRVR+PFG + ER G VV + D S+ P N Sbjct: 1 MPKFARVLPDMSLDKTFDYKIPAGMDLRLGCRVRIPFG-RTERTGYVVDLVDKSDFPENR 59 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LKA+ ++ + + +L W ADYY + + + LP +R+ + F Sbjct: 60 LKAIA--VNEGHLIPEKMMQLGQWIADYYCTGMIQSVRNMLPAPVRKDKVKEKTQKLLSF 117 Query: 120 ATEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQV--ATLEFNDAALQALRKKGLCDL 176 A + L K+ P + + AL K + + + +++L K G+ + Sbjct: 118 AEGIQPPSLVPELEKKYPPRAAVVKALLGLKEAPQALLMKVANVSASPIKSLLKAGILEE 177 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVY 234 E + + + L L EQ A I + D + +L G+TGSGKTEVY Sbjct: 178 EVRHVERDPFGDEEVIISKPLELTDEQTDAFKLITNEMDEEKPATVVLYGITGSGKTEVY 237 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + L++GKQA+V+VPEI LTPQT+ RFR RF V VLHSGL++ ER W Sbjct: 238 LQAIAEALSRGKQAIVLVPEISLTPQTVHRFRSRFGKQVSVLHSGLSEGERYDQWKLISR 297 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GE IV+G RSALF PF N G+IV+DEEH+ SYKQ RY+ARD+AV R ++ P++L Sbjct: 298 GETQIVVGARSALFAPFHNPGIIVVDEEHEPSYKQDSHPRYNARDIAVMRGIMDKCPVVL 357 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITR 410 GSATP+ ET+ N Q KY++ +LT+R A ++D++ + G + LI Sbjct: 358 GSATPSFETMNNANQGKYKMAKLTQRPSTAVVPSIKLVDMRTEAAATGSNQIFSRELIES 417 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 ++Q L Q ILFLNRRG++ L C C + ++C C +T H+ + L CH C + Sbjct: 418 VKQQLHDRMQTILFLNRRGYSTHLTCEKCQYTSKCGDCSTSHTYHRKSNVLICHLCGDIK 477 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P +CP CG L GLGTE++E+ +FP I+R+D DT +RK + + L + + Sbjct: 478 EPPTKCPDCGHKDLSFSGLGTEKIERLCRGVFPNARIARMDSDTMTRKDSHKTMLGDFQQ 537 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G ILIGTQM+AKG HFP VTLV ++ D L ADFR+AER QL QV+GR+GR Sbjct: 538 GKYDILIGTQMIAKGLHFPRVTLVGVVFADAGLNMADFRAAERTFQLLAQVSGRSGRGDD 597 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G V++QT++P HP LQ L +DAF E R +M+ PP++ V++ Sbjct: 598 AGRVLIQTYNPTHPALQCALEGDFDAFYEDEKMGREVMKFPPFSKMVLIHFRGPEEGPLA 657 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 + + D++L P P+ K G++R+Q+ + + RL ++N L Sbjct: 658 SLASDFSQHLSKACTKDDRLM---PAVPSPIEKVRGQYRYQLTIFSDNIRRLVRVLN-WL 713 Query: 710 ALINTIPDSRKVKWVLDVDP 729 L ++ K ++DVDP Sbjct: 714 RL--NYKAPKEYKIIIDVDP 731 >UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=Staphylococcaceae RepID=A5IS97_STAA9 Length = 802 Score = 820 bits (2119), Expect = 0.0, Method: Composition-based stats. Identities = 263/800 (32%), Positives = 407/800 (50%), Gaps = 76/800 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASE--L 55 +A V + V + FDY++PE + ++ G RV VPFG + + G V+ V+ + L Sbjct: 2 IAKVIVDVASKSVDYKFDYIIPEQLESVIQPGVRVIVPFGPRTIQ-GYVMEVTAEPDAQL 60 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA---- 111 +++LK ++EV D +P T + L W + +L LP ++ A Sbjct: 61 DVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISMLEVMLPSAIKAKYKKAFKMK 120 Query: 112 -------------NAPMWYWF-------------------ATEQGQAVDLNSLKRSPK-- 137 + +Y++ E+ + N K++ + Sbjct: 121 DDIELPSALLQKFDKHGYYYYKDAQKNNDIQLLMKLLKDDIVEEKTILTQNITKKTKRAV 180 Query: 138 --------------------QQQALAALRQGK---IWRDQVATLEFNDAALQALRKKGLC 174 Q A L + + I+ + + F+ ++L L KKG Sbjct: 181 RVIEGYHPDEVLAKLEKVIKQYDLYAYLSEEQHKTIFLTDIEDMGFSKSSLDGLIKKGYV 240 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTE 232 + E ++ + +L +Q A AI + +LL GVTGSGKTE Sbjct: 241 EKYDAVVERDPFKDRVFEQESKQQLTEDQYKAYEAIKAKIVSQEQETFLLHGVTGSGKTE 300 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VYL +E+VL+QGKQA+++VPEI LTPQ + RF+ RF V VLHSGL++ ER W K Sbjct: 301 VYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKI 360 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 ++ A + +G RS++F PFKNLG+I+IDEEH+S+YKQ++ RYHAR++A +R+ P+ Sbjct: 361 RDDRARVSVGARSSVFAPFKNLGLIIIDEEHESTYKQEDYPRYHAREIAQWRSEYHHCPV 420 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 ILGSATP LE+ ++ Y LL L R ++D++ + + + L Sbjct: 421 ILGSATPCLESYARAEKDVYHLLSLPNRVNQQALPEIDIVDMREELSEGNRSMFSKDLRE 480 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ L QV+LFLNRRG+A +LC DCG++ +CP CD T H+ L+CH+C Q Sbjct: 481 AIQLRLDRQEQVVLFLNRRGYASFMLCRDCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQ 540 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 P QCP+C S H+ VG GT+++E+ L F I R+D DTTS+KGA E+ L E Sbjct: 541 ETPPNQCPNCESEHIRQVGTGTQKVEELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFE 600 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 +G IL+GTQM+AKG +P++TLV +L+ D L DFR++ER QL TQVAGRAGR Sbjct: 601 KGNGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHE 660 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 K G+V++QT++P+H + + Y F Q + R++ + PP+ + + Sbjct: 661 KAGQVIIQTYNPDHYSILDVQKNDYLTFYRQEMEYRKLGKYPPYYYLINFTISHKEMKKV 720 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q + ++L EK VLGP PA + +R+QIL+++ S L I Sbjct: 721 MEASQHVHKILLQHLT--EKALVLGPSPAALARINNEFRFQILVKYKSEPGLLQAIQFLD 778 Query: 710 ALINTIPDSRKVKWVLDVDP 729 + K+ +D+DP Sbjct: 779 DYYHEKFIKEKLALKIDIDP 798 >UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E46_THICR Length = 774 Score = 820 bits (2118), Expect = 0.0, Method: Composition-based stats. Identities = 333/774 (43%), Positives = 451/774 (58%), Gaps = 48/774 (6%) Query: 3 VAHVALPVPLPRTFDYLL-----------------PEGMTVK-------AGCRVRVPFGK 38 VA+P P DY + PE T G RV+VPF + Sbjct: 2 FVKVAVPGPFLSPLDYRIQAEKADHRIETLALDLEPEEQTESKKSFLPVVGGRVKVPF-R 60 Query: 39 QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFH 98 + IGIV+++SD + + +LKA+ +V+D P+F+ LL WA+ YYH PIG+V+ Sbjct: 61 NKSLIGIVMALSDDATVATQKLKALEDVIDEMPIFSEQEMALLSWASHYYHEPIGNVVQT 120 Query: 99 ALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ---V 155 ALP LR+G A + W TE G+ D R+ +Q+ L+Q Sbjct: 121 ALPKRLREGEAVDVAGVSAWQLTEAGREADEQIPSRATQQKALWQLLQQQDEALTAEVLN 180 Query: 156 ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD 215 +L ++ ++KG ++ + + LN EQ AV A+ A Sbjct: 181 RSLNQWRLPMKRFQEKGWVAETEKSCLHAMPVREKTARPGHI-LNAEQQAAVDAVL-ATS 238 Query: 216 TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 F A+L+ GVTGSGKTEVYL ++E+V+AQGKQ LV+VPEIGLTPQT+ RF APV V Sbjct: 239 GFDAFLVEGVTGSGKTEVYLGMIESVIAQGKQVLVLVPEIGLTPQTVKRFEAYLQAPVAV 298 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRY 335 +HSGLND ER AW K + +++GTRSA+FTPF +LG+ ++DEEHD S+KQQ+G+RY Sbjct: 299 MHSGLNDKERHCAWSLVKTHQVNVLLGTRSAIFTPFADLGLCIMDEEHDLSFKQQDGFRY 358 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 ARD V RA E +P++LGSATP+LETL N +Y+ L L +RAG A+ +LD++ Sbjct: 359 SARDCLVRRAQLENVPVVLGSATPSLETLHNALSGRYQHLHLKQRAGQAKMPEVQLLDVR 418 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 GQ + G++ L + HL+A QV+LFLNRRGFAP L+CHDCGW A CP CD T H Sbjct: 419 GQAEEEGISQPLRQEVETHLKAGGQVLLFLNRRGFAPVLMCHDCGWQAACPSCDANMTFH 478 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 Q + LRCHHC Q P CP+CGS +G GTE+LE + FP + R+DRDTT Sbjct: 479 QQVNELRCHHCGYQAKAPLDCPNCGSASFAKIGQGTERLETVVQQWFPDYKVLRVDRDTT 538 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 KG + + +G A ILIGTQMLAKGHHFP VTLV LLD+D LFS DFR+AER A Sbjct: 539 RNKGQMMALTEQASQGRADILIGTQMLAKGHHFPKVTLVGLLDIDQGLFSCDFRAAERMA 598 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL QV+GRAGR + G+VV+QTHHPEHPLL+ L+ +GY+AFA++AL ER LPP+ Sbjct: 599 QLVVQVSGRAGRGERPGQVVIQTHHPEHPLLKVLVARGYEAFAKEALKEREQADLPPYQY 658 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD------------------EKLWVLGPVP 677 V++RAE + FL +++ + + ++ + L V GPV Sbjct: 659 QVLLRAEAVDANAGWTFLNDVKSALNFAKMSMLRSYLSVNDSDDIKAEMLQGLEVFGPVS 718 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 A +R GR+R+Q+LLQ R L + + T ++KV+W LDVDP E Sbjct: 719 APMLRRQGRYRYQLLLQGAHRGFLHQWLAQVETQLYTSNQAKKVRWSLDVDPQE 772 >UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria RepID=C6P2J4_9PROT Length = 739 Score = 818 bits (2113), Expect = 0.0, Method: Composition-based stats. Identities = 308/744 (41%), Positives = 442/744 (59%), Gaps = 19/744 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MP+ VAL VPL FDY++ E M ++ G RV VPF ++++ +G+ + + L ++ + Sbjct: 1 MPIIRVALDVPLSTLFDYVVSEEMRLEIGQRVVVPF-RRKQALGVAMEWVQETALAVDRI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V +VLD P + LL + +DYYH+P+G + ALP LR P + Sbjct: 60 KPVTQVLDDVPPLPQELLALLRFCSDYYHYPLGMTVLAALPTRLRAVEPITVKQALDYTL 119 Query: 121 TEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLEFN-DAALQALRKKGLCDLAS 178 + G+A+D+ +L KR QQ+ L ALR + Q+ TL + AAL++L + G + + Sbjct: 120 SAAGRALDIATLPKRRVVQQRILQALRLAPLSGAQMRTLSPSAPAALKSLLEAGWVECVA 179 Query: 179 ET--PEFSDWRTNYAVSGER-------LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSG 229 P + + E+ L EQ AV A+ + +LL G+TGSG Sbjct: 180 RKAGPLSNSLPQAGERTNEKGNLLLGAHALTDEQQQAVDAVTQQKG-YGCFLLHGITGSG 238 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSA 288 KTE+Y+ ++ +L + Q L++VPEI LTPQ FR RF + LHSGL D ER Sbjct: 239 KTEIYVHLMHEMLQRSGQILLLVPEINLTPQLENYFRSRFPDVDLVSLHSGLADGERAQN 298 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 WLKA++G+A IV+GTR ++F P L +I++DEEHD S+KQQ+G RY ARD+A++RA+ Sbjct: 299 WLKAQSGDARIVLGTRLSVFAPLPKLSLILVDEEHDPSFKQQDGLRYSARDVAIFRANQR 358 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGLAPAL 407 +PI+LGSATP+LE+ N Q +Y+LL+LT+RA A + +D+ +Q GL+ L Sbjct: 359 GVPIVLGSATPSLESWFNAQSGRYKLLKLTQRAVQPATLPVVRCMDITKLPLQDGLSEPL 418 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 +T + LQ Q ++F+NRRG+AP L+C CGW++EC C LHQ LRCHHC Sbjct: 419 LTAIETRLQRKEQSLIFINRRGYAPVLMCTSCGWLSECKHCAGKLVLHQKDRSLRCHHCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 +Q+ VP CP+CG L PVG+GT++LE+TL FP I R+DRD+T KGA + Sbjct: 479 AQQRVPNACPTCGDADLKPVGIGTQRLEETLQTRFPNARILRVDRDSTRNKGAWSAMRKQ 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 +H G A ILIGTQMLAKGH FP++TLV ++ DGAL+SADFR++E+ TQV GRAGR Sbjct: 539 IHDGEADILIGTQMLAKGHDFPNLTLVGVISPDGALYSADFRASEKLFAQLTQVGGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 A K GEV++QT P HPL Q L Y+ +A+ LAER+M PP+ ++ AE Sbjct: 599 ADKAGEVIMQTAFPNHPLFQALRAHNYEIWAQTLLAERQMAGFPPFVYQALLSAEGKQES 658 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A FL+Q R+ + + + V G VPA PKR R Q+L+Q R L + Sbjct: 659 DAYNFLKQARSAAMELHMP---VEVYGVVPAAMPKRANHHRAQLLVQSDKRKALGEFLRA 715 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 +++ +P K++WVLDVDP+E Sbjct: 716 WKPILDALPAG-KLRWVLDVDPME 738 >UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYU8_9GAMM Length = 746 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 324/747 (43%), Positives = 448/747 (59%), Gaps = 24/747 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VALPVP+ FDY + GCRVRVPFG ++ +GIVV+ + S+L N +K Sbjct: 2 LIQVALPVPIDSVFDYRVVGDALPAIGCRVRVPFGARK-LVGIVVAHIEHSQLTQNAIKP 60 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V+++LD P+ ++ +L W + YY +P+GDV LP L+RQG + W Sbjct: 61 VLDILDERPIVDEALLKLAYWLSAYYCYPLGDVFAVMLPTLIRQGMTL-DYRQLCWQQLR 119 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGK---------------IWRDQVATLEFNDAALQA 167 D ++ + +QQ AL L + + A L+ Sbjct: 120 DATDEDFSASAKKQRQQFALCELVINSHGNSHRNSHGNDTKLVTEFALIDHGVEPAYLKK 179 Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGV 225 +KGL + P ++ L LN +Q AV I A + +LL G+ Sbjct: 180 FEQKGLIAPVYQMPSLPKLAK---LATTPLTLNLQQQQAVQKITRACQQPHYEGFLLNGI 236 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKTEVYL V++ VLAQGKQ L++VPEIGLTPQT RF ERF+A V +LHSGLND+ R Sbjct: 237 TGSGKTEVYLQVMQTVLAQGKQVLILVPEIGLTPQTRQRFAERFDAQVLMLHSGLNDTVR 296 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 L W + + G A I+IGTRS++ PF NLG+I++DE HD SYKQQ+ RYHA D+A+YR Sbjct: 297 LDGWQQCRLGYAQIIIGTRSSVLYPFANLGLIIVDESHDQSYKQQDSLRYHASDVALYRG 356 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAP 405 P+ILG+ATP+LE+L VQQ K L LT+RAG+A+PAI ++D + Q Q GLA Sbjct: 357 FQLNCPVILGTATPSLESLYLVQQGKLTELTLTQRAGDAKPAIMQLIDARQQAWQNGLAQ 416 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCH 464 +LI +RQ L D QV++FLNRRG+AP LLC CGW A+CPRCD + T+H Q L+CH Sbjct: 417 SLIQAIRQTLDKDEQVLVFLNRRGYAPILLCDACGWQADCPRCDAHLTVHFQPVAMLKCH 476 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 HCD Q+ +P CPSCGS++L PVG+GT ++ + L LFP VP+ +IDRDTT +K + EQ Sbjct: 477 HCDWQQAIPNHCPSCGSSNLDPVGMGTARMVEGLIELFPDVPVIQIDRDTTRKKNSWEQV 536 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 + IL+GTQM+AKGHHFP+VTLVA+ + D S+DFRS E AQL QVAGR Sbjct: 537 YQRIADNPKAILVGTQMVAKGHHFPNVTLVAIPNADRGFLSSDFRSPEHTAQLIIQVAGR 596 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGRA K G V++QT PE+P L TL+ +GY +FA+Q LAERRM+ LPP T +VR E Sbjct: 597 AGRADKAGLVLIQTLQPENPALLTLVREGYLSFAQQLLAERRMLGLPPLTYACLVRVESK 656 Query: 645 NNQHAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 + ++ L Q L+ S + + + GPV A K+ R+ +L+ +R Q Sbjct: 657 SLENNQQILHQAIALLPSRQHMTALGIAINGPVDAPMAKKNSRYHSHLLILTKTRHVRQQ 716 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPI 730 +++ +P ++ + +D+DP+ Sbjct: 717 LLSDWWRQTIALPSAKYARLSIDIDPM 743 >UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9P6_HAHCH Length = 746 Score = 817 bits (2110), Expect = 0.0, Method: Composition-based stats. Identities = 312/743 (41%), Positives = 433/743 (58%), Gaps = 18/743 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK----AGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 V VALPVPL R FDYL ++ G RV+VPFG++ G+++++SD SELP++ Sbjct: 6 VVTVALPVPLRRQFDYLPSHPTDLRENYPPGSRVQVPFGRR-SLTGVILAISDESELPIS 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA----P 114 LK V +VLD P+ + +L W ADYYH PIG+V+F ALP LR + Sbjct: 65 RLKPVAKVLDRAPLIPSVILQLCQWVADYYHAPIGEVVFAALPPPLRTANADTDIISSLQ 124 Query: 115 MWYWFATEQG-QAVDLNSLKRSPKQQQAL-AALRQGKIWRDQVATLEFNDAALQALRKKG 172 YW AT G A + L + KQ+Q L++ + + + L ++ L+AL KG Sbjct: 125 ETYWGATSLGLSAGNAEHLIKGAKQKQLWGLLLKRKSMLQGDITGLGYSLTQLRALSAKG 184 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 L S P E +LN EQ A+ I S D+F LL GVTGSGKTE Sbjct: 185 LIQPHSHIPGGGGAAPQII---EPPQLNQEQQEALNRISSEPDSFRTILLNGVTGSGKTE 241 Query: 233 VYLSVLENVLAQ--GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 VYL+ + L+Q Q L + PEI LTPQ RF RF V HS L D ER+ W+ Sbjct: 242 VYLAWIALALSQRPDSQFLALAPEISLTPQLRQRFALRFGDKVAAYHSALTDKERMRVWI 301 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 G IVIGTRSA+F PF +L I++DEEHDSS+KQQ+G RY+ARDLA+ RA Sbjct: 302 NILEGRTQIVIGTRSAVFLPFNDLAGIIVDEEHDSSFKQQDGARYNARDLAILRAKEHSC 361 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITR 410 PI+LGSATP+LE+L N + +Y + L +RA NA +LD+K + + G++P L+ Sbjct: 362 PIVLGSATPSLESLMNARGGRYESVLLRQRAVNADTPSIRLLDIKSRPLHGGISPPLLEE 421 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 ++QHL QV+LF+NRRGF+P L+C +CGW+AEC CD T H LRCHHCDS Sbjct: 422 IKQHLTEQRQVMLFINRRGFSPTLMCVECGWLAECQHCDARLTYHMKAALLRCHHCDSTY 481 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 +P CP C L VG GTE+ E+ L FP P+ RIDRDTT KG+L+ +L ++ Sbjct: 482 SLPTCCPKCKQDSLKAVGAGTERTEEFLETTFPDTPVIRIDRDTTQTKGSLQDKLLQIRS 541 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 I++GTQMLAKGH FP++ LV +++ D LFS+DFR+AE+ AQL QVAGRAGR+ Sbjct: 542 NEPCIIVGTQMLAKGHDFPNLALVGIINADSGLFSSDFRAAEKTAQLLLQVAGRAGRSAV 601 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +G+V++QT P HPLLQ + + Y+A E+ L R +LPP+TS ++RAE + A Sbjct: 602 EGKVIIQTLFPSHPLLQAIAAQDYNAICEEELHIREAGRLPPFTSMALIRAEAPLLEAAL 661 Query: 651 LFLQQLRNLILSSPLADE--KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 L L+ +L ++ ++ V GP P++ ++ R+ + L P + L+ + Sbjct: 662 GGLWSLKESLLELLKFNDGLQIEVHGPFPSVMQRKQNRFHAILWLFAPQKAELRQFLKHW 721 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 L I +W++DVDP+E Sbjct: 722 LRYSEGIATPSGFRWLIDVDPLE 744 >UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadales RepID=B3E7V0_GEOLS Length = 758 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 274/741 (36%), Positives = 400/741 (53%), Gaps = 20/741 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VA+P+PL TF Y +PE + ++ G RV VPFG+++ V+ S E +LK Sbjct: 23 VEVAVPLPLDTTFHYRVPEDLAPRIQPGVRVFVPFGRRKV-TAYVLRFSTPPE--GQQLK 79 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 +++VLD EP++T + W ADYY HP+G+VL ALP + ++ Sbjct: 80 GLLDVLDPEPLWTEAELTFFQWIADYYLHPLGEVLKTALPTGINLQSRSSVDGEAVSGGK 139 Query: 122 EQGQAVDLNSL------KRSPKQQQALAALRQGKIWRDQVATLEFNDAA--LQALRKKGL 173 + ++L K K LA LRQ + F + + L+ L + GL Sbjct: 140 KVRHERVFSALPADAPVKLRGKGLDILAFLRQSGSVSSAELKVRFGECSPNLRRLVELGL 199 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKT 231 ++ + L Q A+ I +A D+ FS +LL G+TGSGKT Sbjct: 200 VRMSEHEVYRDPFAGLSVTKDSPKPLTLHQQQALTTILTALDSRYFSPFLLHGITGSGKT 259 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + + LA G+ ALV+VPEI LTPQ + RFR RF + VLHS L+D ER W + Sbjct: 260 EVYLQGIAHTLAAGRNALVLVPEISLTPQLVQRFRARFCDGIAVLHSALSDGERYDEWRR 319 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GE IVIG RSA+F P + +G+IV+DEEH++S+KQ +G RY+ARDLA+ R EQ Sbjct: 320 IRRGEVRIVIGARSAIFAPLERIGIIVVDEEHEASFKQSDGLRYNARDLALVRGQQEQAV 379 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 ++LGSATP + T QQ K L L R GN +++ + ++ L+P LI + Sbjct: 380 VLLGSATPLITTRFAAQQGKLGYLSLPERVGNRPLPATSIINTR-MTAESPLSPQLIEAL 438 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +L+ Q +LFLNRRGFA L+C CG +CP C T H+ + CH+CD Q P Sbjct: 439 ADNLERGEQSLLFLNRRGFASWLVCPACGADLQCPNCSVSLTYHRQRRKSLCHYCDYQVP 498 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 P CPSCG L +G+GTE++E L FPG I+R+D DTTS KG + L +V RG Sbjct: 499 APCICPSCGELELKEMGVGTERIEHELLEQFPGARIARMDSDTTSGKGGHARILDKVGRG 558 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 IL+GTQM+AKGH FP VTLV +L +G+L+ DFR+ ER Q+ +QV GRAGR Sbjct: 559 EVDILVGTQMIAKGHDFPGVTLVGVLQAEGSLYLPDFRATERTFQVLSQVIGRAGRGELP 618 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V+LQ P+H + ++ F ++ L R+ + PP+ ++ + + Sbjct: 619 GRVLLQAMTPDHYGIAYAADHDFERFYQEELLFRQELNYPPYGFLAAIKLSATSEKSLTS 678 Query: 652 FLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 +Q ++ S ++ +LGP PA + GR+R QILL+ SR L+ ++ +A Sbjct: 679 AAEQSAAVLRSIKSRLGLRVEILGPAPAPLYRLRGRFRQQILLKDSSRAALRRLL---IA 735 Query: 711 LINTIPDSRKVKWVLDVDPIE 731 V+ +D+DP++ Sbjct: 736 YRREQSLPATVRMAIDIDPVD 756 >UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Marinobacter RepID=A1TYV0_MARAV Length = 723 Score = 815 bits (2105), Expect = 0.0, Method: Composition-based stats. Identities = 318/729 (43%), Positives = 442/729 (60%), Gaps = 15/729 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 A +AL PL R FDY +PE MTV G RV+VPFG+Q G+VV LK + Sbjct: 7 ARIALNRPLRRLFDYRIPETMTVSPGQRVKVPFGRQ-TLTGLVVETGVTPP-DGITLKPI 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +EVL+ + ++LL WA+DYY HP+G+ LF ALP LR+GRP+ +W T+ Sbjct: 65 LEVLEPWLALPAATFQLLSWASDYYQHPLGECLFTALPPALRRGRPSQQKQDEHWQGTQN 124 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRD-QVATLEFNDAALQALRKKGLCDLASETPE 182 + N + +Q+ L A+++ ++ FN +++L KGL +L Sbjct: 125 IAPLPAN----AHRQKALLEAIQRAPGISTGELVKAGFNRTQIKSLHDKGLIELTEPQLP 180 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + A + E L+ Q A + A D FSA LL G+TGSGKTE+YL L+ L Sbjct: 181 ACN---QTAGTVEGPELSPAQLAAAKDLPQATDRFSATLLYGITGSGKTELYLHYLKQQL 237 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 +QAL++VPEI LTPQT+ARFR F + + HS LND ERL WL+ +NGE I+IG Sbjct: 238 QADQQALILVPEINLTPQTLARFRRYFGSRIVAWHSALNDGERLDTWLRIRNGEPVILIG 297 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+ PF NL I++DEEHDSSYKQ EG+RY RD+AVYRAH + P+ILGSATP+LE Sbjct: 298 TRSAVLLPFTNLRAIIVDEEHDSSYKQGEGFRYSGRDVAVYRAHLNKCPVILGSATPSLE 357 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 + N +Q KY L+RL +RAGNA P +LD++ + ++AGL+ + +++ L Q + Sbjct: 358 SWHNARQGKYHLIRLEQRAGNALPPEVALLDIRSRPLEAGLSRPTLNAIKEVLTRGEQAL 417 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 +F+NRRGFAP ++C DCG + ECPRCD T H+ +RCHHCD Q CP C S Sbjct: 418 VFVNRRGFAPIMMCFDCGHMEECPRCDTRLTYHRRDRAMRCHHCDFQMAASHTCPKCRSE 477 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 + PVG GTE+ E+TLA FP PI R+DRD+T RKG+++ LA+V+ G IL+GTQML Sbjct: 478 NFKPVGQGTERTEETLAEQFPDTPIVRVDRDSTQRKGSIQGILAKVNSGEPCILVGTQML 537 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGH FP+VTLV +++ DG LFS DFR+ E+ Q QV+GRAGR K G+V++QT H + Sbjct: 538 AKGHDFPNVTLVTVVNADGGLFSVDFRAPEQMVQTLLQVSGRAGRGEKPGKVLIQTCHSD 597 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPLL++L Y A A+Q L ER+ LPP+ + I+RAE Q + L ++ Sbjct: 598 HPLLKSLCQGNYAALADQLLTERQTGALPPFRAMAILRAEADTMQASLQLLDSIK----- 652 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 A + GP+PA+ ++ R R Q++L R +L H++ ++ K Sbjct: 653 PKTAANGIETWGPLPAVIARKADRHRAQLILCSNHRRQLNHLLTHVCQYLDQCKLPASTK 712 Query: 723 WVLDVDPIE 731 W++DVDP E Sbjct: 713 WIVDVDPQE 721 >UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W073_DESAS Length = 747 Score = 814 bits (2103), Expect = 0.0, Method: Composition-based stats. Identities = 261/744 (35%), Positives = 398/744 (53%), Gaps = 19/744 (2%) Query: 3 VAHVALPVPL---PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A + + VP+ R F Y++P + +K G RV VPF ++ G VV S +++ Sbjct: 6 YAEIVVDVPVRNVDRVFSYIVPADLFPAIKFGMRVIVPFAGRKV-TGYVVGFSGITQVSQ 64 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +LK V+ VLD+EPV T +W L W YY + L + +R + +W Sbjct: 65 EKLKPVLAVLDNEPVITEELWTLARWMKAYYLCTLAQALKCMVSPAVRVKAAGSYTGLWI 124 Query: 118 WFATEQGQAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 FA + A L L RSPKQ + AA + G + + + A + AL KGL Sbjct: 125 GFA-DNQLAQVLAKLNRSPKQSAVIKAAAGQPGLSPKALADQVGVSSATVSALVGKGLLQ 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEV 233 + + + + + L EQA G I A + + L G+TGSGKTE+ Sbjct: 184 ARTTSVRRNPYPIKPTGIPGPV-LTPEQAYCAGEIIRAIESSQSQVFALHGITGSGKTEI 242 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL+V+ L G++ L+ VPEI LT Q + F+ER+ V VLHS L+ ER W + + Sbjct: 243 YLNVIARALVLGRKTLITVPEIALTGQMVNTFKERYGDTVAVLHSALSAGERYDEWQRIR 302 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 NG++ IV+GTRSA+F P G+++IDEEH+++YKQ + RYHAR++A+ RA +I Sbjct: 303 NGDSKIVLGTRSAVFAPLSGPGLLIIDEEHEAAYKQDDQARYHAREVALQRAKLSGAVVI 362 Query: 354 LGSATPALETLCNVQQ-KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 LGSAT +LE+ C Q+ YR L + R +DL+ + + + AL+ Sbjct: 363 LGSATMSLESYCRAQKEGPYRYLSIENRIEQKPLPQIKTIDLRAETHKGNPGIFSLALLQ 422 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ + ++ Q ILF+NRRGF+P ++C DCG++ +CP CD T H LRCH+C+ Sbjct: 423 KIEEKIRLKEQTILFINRRGFSPIVICRDCGFVLKCPHCDISLTYHSDL-TLRCHYCNYI 481 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 PV +C +C S L G GT+++E+ + +FP + R+D DTTSRKGA + L Sbjct: 482 SPVINKCSNCASEQLRFAGTGTQKVEEEIRHIFPSAGVLRMDADTTSRKGAHAEILKNFL 541 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 G A ILIGTQMLAKG + P+VTLV +++ D L DFR+AE+ QL TQVAGRAGR Sbjct: 542 DGKADILIGTQMLAKGLNLPNVTLVGVINADTTLHMPDFRAAEKTFQLLTQVAGRAGRGE 601 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 K GEV++QT++PEH ++ L Y F Q + RR + PP++ + + + Sbjct: 602 KPGEVIIQTYNPEHYSIKAALNNSYKDFYAQEMIIRRELGYPPFSRLIRIILSSTQSALV 661 Query: 650 PLFLQQLRNLILSSP--LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 L+ +L + +LGP PA K ++RWQI+L+ + L+ + Sbjct: 662 QSGAFLLKECLLEAQRDFNPHGPDILGPAPAPLHKIKEKYRWQIVLKGKQALILRQLAAK 721 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 + + + +R + ++DV+P Sbjct: 722 GIDIFESRQGNRLLSIIVDVEPQN 745 >UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FF05_ACIAD Length = 743 Score = 813 bits (2101), Expect = 0.0, Method: Composition-based stats. Identities = 319/735 (43%), Positives = 449/735 (61%), Gaps = 15/735 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVS--VSDASELPLNE 59 VA+PV L TFDY + + +AG RV V FG+Q IG++ D P + Sbjct: 15 VRVAVPVHLYDTFDYSVSQQQYEQAQAGARVLVSFGRQ-SLIGVITEKLAPDLPIDPRFQ 73 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK + E++D P+ V LL W+A YY PIG+V+ ALP LLRQG+ + + + W Sbjct: 74 LKTIRELIDQAPILDTKVLTLLTWSAHYYQFPIGEVIQTALPSLLRQGK-SQDVLTYIWK 132 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ--VATLEFNDAALQALRKKGLCDLA 177 T +A + LKRS KQ A L+ + + A L+AL KK L Sbjct: 133 ITAHPEA--ESKLKRSQKQYDAYQILKLHPTGTTETILNLSGVETATLRALAKKELVACT 190 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 E +F+ A L N +Q A+ + + + A+LL G+TGSGKTEVYL + Sbjct: 191 QEIQDFTPMPVQLAQMP--LTPNPDQHNAIQRVLKSLHHYQAFLLDGLTGSGKTEVYLQI 248 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VL QGKQ LV+VPEIGLTPQTI+RF+ RF+ V +LHSGLNDS+RL AW +AK G+A Sbjct: 249 MHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALLHSGLNDSKRLQAWQQAKMGKA 308 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +I++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR + EQ P+ILGSA Sbjct: 309 SIILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGYLEQCPVILGSA 368 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP++++ V+Q K LL+L +RAG A H++DLK K GL+ LI +++ L Sbjct: 369 TPSIDSYHLVEQNKLELLQLNQRAGVALLPKMHLIDLKVAKKNEGLSQILIDQIQHTLDR 428 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQC 476 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P C Sbjct: 429 QEQVLIFLNRRGYAPVLVCESCGWQANCPNCDAHFTLHTQPYGYLHCHHCGTIHRLPETC 488 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P C L +G+GT ++E+ L LFP + R+DRD+TSR G+ ++ + IL Sbjct: 489 PECHHHTLKTLGMGTAKVEEHLKTLFPEHDVIRVDRDSTSRVGSWQKIYDRIQHNKPMIL 548 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V + Sbjct: 549 LGTQMLAKGHHFPYVTLVAILDIDAGLLSVDVRAPERTAQLIVQVAGRAGRGEHKGHVYM 608 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT P+HP+L TL+ K Y A A+ L ER+ +LPP+ V++R E + ++ FLQ++ Sbjct: 609 QTLRPDHPMLTTLIEKDYRAVAKDMLEERKAARLPPYRYSVLIRCESRDRDYSQAFLQEI 668 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 ++ A + + + GP+PA ++ GR+R +++ R RL + A + +P Sbjct: 669 AQML--QHQAGDSIEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRPWWAEVIQLP 726 Query: 717 DSRKVKWVLDVDPIE 731 +++ +DVDP E Sbjct: 727 RQHQLRLSIDVDPQE 741 >UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5C3_9GAMM Length = 727 Score = 811 bits (2095), Expect = 0.0, Method: Composition-based stats. Identities = 306/734 (41%), Positives = 446/734 (60%), Gaps = 17/734 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDAS-ELPLNEL 60 + +A+P PL + FDYL E +AG RVR+ F + IGIV+ D + ++ +L Sbjct: 4 ILQIAVPCPLRQLFDYLSEEPENHWQAGMRVRINFANR-SCIGIVIKARDVTNDIDTRKL 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+ E LD + + + + +LW + YYHHP+G+ ALP LR+G + +WF Sbjct: 63 KAIDEKLDDQALIPEEILQTVLWVSRYYHHPLGECFQAALPKQLRKGETSDLQLENWWFK 122 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT---LEFNDAALQALRKKGLCDLA 177 T+Q ++ K KQQ + L Q A L ++L+AL +K L Sbjct: 123 TDQ-----QSNKKLGTKQQACIDFLNDYPDGISQAAMKAHLGTVLSSLKALEQKNLVKQE 177 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 F LN +Q T + A+ F +LL G+TGSGKTEVY + Sbjct: 178 ----PFPKLPIAQVELSVPFELNNKQKTVIEAVWQKKAQFQPFLLEGITGSGKTEVYTEL 233 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 E ++A+GKQ L+++PEIGLT Q + RF++R N + VL+S ++D +R WL AK G A Sbjct: 234 TEKIIAEGKQVLILIPEIGLTGQFVDRFKKRLNTNIVVLNSAVSDGDRKQGWLLAKRGLA 293 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 ++IGTRSA+FTP + G+I+IDEEHD+SYKQQ+G +YHAR++A+ RA IP+++GSA Sbjct: 294 KVIIGTRSAVFTPLPDAGLIIIDEEHDASYKQQDGLKYHARNVALIRAQKRGIPVLMGSA 353 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L V+Q++Y+LL+L +RAG A ++D GL+ L+ M QHL A Sbjct: 354 TPSLESLYQVEQQRYQLLQLKQRAGGAALPKVQLIDSNAAHPDHGLSQLLLKNMHQHLNA 413 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 NQVILF+NRRG+AP L+CHDCGW A+C CD +HQ ++ L CHHC + + CP Sbjct: 414 GNQVILFINRRGYAPVLMCHDCGWQAKCQHCDARMVVHQQRNILFCHHCGFIQRLLEACP 473 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C S L G GTE++EQ L LFP + R+DRDTT R A +A++ +G ARIL+ Sbjct: 474 ECESKQLKSYGAGTEKIEQVLQKLFPDTAVVRVDRDTTQRVNAFNDIVADIKQGQARILV 533 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGH F DVTLV +LD D L+SADFR+ E AQ+ TQV GRAGR K+GEV++Q Sbjct: 534 GTQMLAKGHDFHDVTLVGVLDTDQGLYSADFRATENLAQMITQVTGRAGRGDKKGEVIIQ 593 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + P+HP ++L+ +GY A+ L ER M +PP ++ ++RAE A FLQ + Sbjct: 594 SQQPQHPFWESLIQQGYKKTAQDLLQERIDMAMPPVSNWAVIRAEAQERHQAMDFLQAVT 653 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 +++ S+ + + +LGPVPA+ K+GGR+R Q+LL R L +++ + I + Sbjct: 654 SILHSTQ--QQHVLILGPVPAIMEKKGGRFRAQLLLTCQQRKPLHQLLDQHIQAIGSHKL 711 Query: 718 SRKVKWVLDVDPIE 731 +RK++W +D+DP++ Sbjct: 712 ARKLRWSIDIDPMD 725 >UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCN0_LEGLO Length = 753 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 299/731 (40%), Positives = 436/731 (59%), Gaps = 13/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY + + G RV VPF ++Q R+G+V+S+ +A + LK Sbjct: 32 VYQVCIPNTNRDCFDY-IADEFAPCIGARVWVPF-RKQTRLGVVISLKEAVQ-DSVLLKT 88 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + V+D EP+ + L LW A YY P+ +VL ALP R G ++ Sbjct: 89 ISAVIDKEPLLDEKILTLCLWIASYYQSPLSEVLPLALPKKYRLGEVCQLPMSDFYQLAL 148 Query: 123 QGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 N R+ KQ + + L ++ + + + FN + L L + L+ + Sbjct: 149 PLDEAKKNIPARAHKQLKLIEFLSIQKEPVAQRDLIQKGFNHSQLGHLVATQVLSLSQKI 208 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 ++ L LN+EQA AV I F +LL GVTGSGKTEVYL V+ Sbjct: 209 IFPQRAEISHI---PSLTLNSEQAVAVATIKEKLSHFQCFLLQGVTGSGKTEVYLQVIAE 265 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VL QGKQ LV+VPEIGLTPQ +ARF RF P+ V+HSGLN+SER AW AK + +V Sbjct: 266 VLEQGKQVLVLVPEIGLTPQLVARFTARFKQPIAVIHSGLNESERQVAWQLAKENKVKVV 325 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTR+++FTP LG+IV+DEEHD S KQ EG RY ARD A+ RA+ IPIILGSATP+ Sbjct: 326 IGTRASIFTPMPALGLIVVDEEHDPSLKQMEGVRYSARDTALMRANLANIPIILGSATPS 385 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +Q+KY+LLRLT +A + P ++DL+ Q VQ GLA + +++HL+ NQ Sbjct: 386 LESIYNCKQQKYKLLRLTHKALSTTPLHYQLIDLRSQVVQHGLATPTLHVIQEHLKKKNQ 445 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + P C +C Sbjct: 446 VLVFINRRGFAPVLLCHQCGWMVDCRACDSHLTLHKQIGQMICHHCGLTQKKPEYCSNCQ 505 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 T L+PVG GT+++ + L FP + + RIDRD +K ++++ L ++H G A++++GTQ Sbjct: 506 GTELMPVGAGTQRIHEFLGLHFPHIEVMRIDRDAVRKKNSMDEHLDKIHSGEAQLIVGTQ 565 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV +LD D L++ DFR+ E QL TQV+GRAGRA G V++QTH Sbjct: 566 MLAKGHHFPRLSLVVVLDADAGLYNQDFRALEHLGQLLTQVSGRAGRADSAGHVLIQTHM 625 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ +GYD+FA+ L R+ ++PP+ ++RA+ + FL ++ I Sbjct: 626 PDHPLLNLLIQQGYDSFADFLLTMRQQAEMPPFYFLAVIRAQGKAATNVAKFLHAVKEQI 685 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + V+GP PA P++ ++R Q+L++ SR L++ + + S Sbjct: 686 KT-----HSIIVMGPAPAPMPRKANQYRMQLLIKSASRKALKYALTQLREWLTKNKLSNG 740 Query: 721 VKWVLDVDPIE 731 ++W +DVDP++ Sbjct: 741 IRWNVDVDPVD 751 >UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514 RepID=B9XLJ1_9BACT Length = 773 Score = 809 bits (2091), Expect = 0.0, Method: Composition-based stats. Identities = 269/781 (34%), Positives = 402/781 (51%), Gaps = 63/781 (8%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A V L + L + FDYL+P + V G RV+VPFG ++ G V ++++ S L Sbjct: 2 IARVTLEIALRKEFDYLIPSELASQVDVGSRVQVPFGARKVL-GCVTAMAEES--AHANL 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + +++V+ ++ + T + +L W +YY P L LP +R+ + A + A Sbjct: 59 RPILKVIGAQTLVTPKILKLARWIGEYYCCPPEIALKSVLPDAVRKEQ-AGWRERLFVRA 117 Query: 121 TEQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 Q + + K +QQ+ L R+ ++ + E A +++L KGL + + Sbjct: 118 LPQTEPLP----KLPKRQQEVYRILEERKELPLQELIDLAETTAATVRSLEDKGLVTITT 173 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--------------------- 217 E E + + + + L LN +QA A+ I +A D Sbjct: 174 EISERDPYAHEHILPSQPLPLNPQQARALERIIAAMDGQQAKPSTASAGDMTPVSSSNNF 233 Query: 218 ----------------SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 S +LL GVTGSGKTEVYL L + L QGK A+V+VPEI LTPQT Sbjct: 234 RLQSDDVPQTEPKNASSVFLLHGVTGSGKTEVYLQALAHALEQGKGAIVLVPEISLTPQT 293 Query: 262 IARFRERFNAP-----VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 + RF+ RF++ V VLHS L+ ER W K + G A IVIG RSA+F P LG+ Sbjct: 294 VERFKARFSSGPLQTLVAVLHSHLSAGERHDEWHKIRQGRARIVIGARSAIFAPVDPLGL 353 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEH+ +YKQ+E RYHARD+A+ R E ++LGSATP++E+ N + KY LL Sbjct: 354 IIVDEEHEHTYKQEESPRYHARDVAIVRGRMEGATVVLGSATPSMESFYNCSRGKYILLE 413 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQA----GLAPALITRMRQHLQADNQVILFLNRRGFAP 432 + R + + V+D++ + +P L ++Q L+ Q ILFLNRRG++ Sbjct: 414 MLERVDAKKMPLVRVVDMRQAMRKGKSIPIYSPQLKEAIQQRLERKEQTILFLNRRGYST 473 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP--SCGSTHLVPVGLG 490 +L C CG++A+CP C T H+ L CH C PVP CP CG+ + GLG Sbjct: 474 SLQCPLCGFVAQCPNCSVSLTYHRRAQILCCHVCGHTEPVPSFCPGPKCGNPDIRYAGLG 533 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 TE++E TL LFP I R+D DT +K + L + G IL+GTQM+AKG HFP+ Sbjct: 534 TEKVEDTLLKLFPHARIKRMDSDTLKKKDDYRRILGDFRLGKIDILVGTQMIAKGLHFPN 593 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV ++ D AL ADFR+ ER QL TQVAGRAGR +GEV +Q+ P HP +Q Sbjct: 594 VTLVGIVYADMALHLADFRAGERTFQLLTQVAGRAGRGDIEGEVFVQSFTPFHPAIQYAR 653 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + F EQ L R ++ PP + ++ + N + L LR + + ++L Sbjct: 654 RHDFAGFYEQELEFREQLKYPPVSRVAMLTLKGRNEEKVKLSADHLRRELEKALAGIKEL 713 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + GP PA + +R+QI+L+ + + ++ V +D+DP+ Sbjct: 714 IIAGPAPAPLARAESLYRYQIMLRARQMSEVSKRLAVMN---QSLSLPEDVSLSIDIDPV 770 Query: 731 E 731 Sbjct: 771 N 771 >UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0E3_9GAMM Length = 726 Score = 808 bits (2087), Expect = 0.0, Method: Composition-based stats. Identities = 313/731 (42%), Positives = 438/731 (59%), Gaps = 12/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY G+ G RV VPF ++Q R+GI+++ ++ E+ + LK Sbjct: 4 VYQVCIPHTHRDFFDYEAEAGLNPCVGARVWVPF-RKQTRLGIILAKNEFQEV-TSSLKC 61 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + V+D EP+ + L W + YY P+ +VL ALP R G+ ++ Sbjct: 62 ISAVIDEEPLIQRDILALCAWISSYYQSPLSEVLPLALPKKYRLGQDCQLPMGDFYQLAL 121 Query: 123 QGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 R+ KQ + + L + + + + F + LQ L + L+ ++ Sbjct: 122 PVTNAKQLVPVRARKQLELIDFLATQTEPVSKHCLTQRGFTSSQLQKLLAAQIIFLSQQS 181 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 T + L LN EQA AV AI + +LL GVTGSGKTEVYL V+ N Sbjct: 182 MVPECADTPMS---PALSLNPEQAEAVTAISEQLQQYQCFLLQGVTGSGKTEVYLQVIAN 238 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VL QGKQ LV+VPEIGLTPQ +ARF RFN + V+HS LN+SER AW AK + +V Sbjct: 239 VLQQGKQVLVLVPEIGLTPQLLARFTARFNQAIAVIHSSLNESERQIAWQLAKENKVKMV 298 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTR+A+FTP +LG+IVIDEEHD+S KQ EG RY ARD A+ RAH IPIILGSATP+ Sbjct: 299 IGTRAAIFTPMPDLGLIVIDEEHDTSLKQMEGVRYSARDTALMRAHLANIPIILGSATPS 358 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +Q KY+LLRLT +A + P ++DL+ Q +Q GLA + +++HLQ NQ Sbjct: 359 LESVHNSKQGKYKLLRLTHKALSTTPLHYQLIDLRAQTLQHGLAIPTLHLIKEHLQKKNQ 418 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+A+C CD + TLH+ + CHHC + P C SC Sbjct: 419 VLVFINRRGFAPVLLCHQCGWMADCRACDSHLTLHKQAGQMICHHCGLTQRTPTYCRSCQ 478 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L+PVG GT+++ + L+ FP + RIDRD +K AL++ L +HRG A++++GTQ Sbjct: 479 SNELIPVGAGTQRVHEFLSSYFPETHVVRIDRDAVRKKNALDEHLEMIHRGEAQLIVGTQ 538 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV +LD D L++ DFR+ E+ QL TQVAGRAGRA G+V++QTH Sbjct: 539 MLAKGHHFPRLSLVVVLDADAGLYNQDFRALEQLGQLLTQVAGRAGRAEHAGQVLIQTHL 598 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ +GYD FAE L R+ QLPP+ ++RA+ FLQ + + Sbjct: 599 PDHPLLNVLIQQGYDDFAEALLTTRQQAQLPPFHYLAVIRAQGKIAGSVLKFLQAAKEHM 658 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 S P L V+GP PA P++ ++R Q+L++ SR L+ + + S Sbjct: 659 QSHP-----LTVMGPAPAPLPRKANQYRMQLLIKSSSRKVLKTSLTQLRTWLTINKLSNG 713 Query: 721 VKWVLDVDPIE 731 V+W +DVDP++ Sbjct: 714 VRWNVDVDPMD 724 >UniRef50_Q21H75 Transcription elongation factor GreA / replication restart DNA helicase PriA n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21H75_SACD2 Length = 736 Score = 806 bits (2082), Expect = 0.0, Method: Composition-based stats. Identities = 317/736 (43%), Positives = 441/736 (59%), Gaps = 15/736 (2%) Query: 3 VAHVALPVPLPRTFDYLL-----PEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +ALPVPL RTFDYL P G+ GCRV+ PFG Q IGI++ V SE P Sbjct: 5 YLEIALPVPLRRTFDYLTNFQGDPNGL---IGCRVQAPFG-NQTLIGIIIGVKAQSETPA 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-RPAANAPMW 116 +++K + ++D P+ +H +L WAA+YYHH +G+VL ++P LRQG R + Sbjct: 61 DKMKDIHTIIDDTPLISHLDLQLFSWAANYYHHSLGEVLHASIPQKLRQGERQEHEQLIS 120 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQG-KIWRDQVATLEFNDAALQALRKKGLCD 175 W T +G + +L RS KQQ+ L Q + R L F+ +A++AL+ K L + Sbjct: 121 AWKHTPEGMGLPETALNRSKKQQEIHRYLLQNTQFTRSTAQRLGFSTSAIKALKDKNLIE 180 Query: 176 LASETPEFSDWRTNYAVSGE-RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 +TN ++ L LN EQ A ++ F A+LL GVTGSGKTEVY Sbjct: 181 EILVKDSIEQVQTNNSLLNNTPLTLNQEQTAAQESVI--FHRFGAYLLDGVTGSGKTEVY 238 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++ L G QALV++PEIGL+PQT+ RF++RF+ + LHS +N+++R W AK+ Sbjct: 239 LQLVARALQAGTQALVLIPEIGLSPQTVGRFKDRFSVEIAELHSSINEAKRAEHWQAAKS 298 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G A IVIGTR A G+I++DEEHD SYKQ +G+RY ARD+ VYRA IP++L Sbjct: 299 GRAKIVIGTRLAALAALNKPGIIIVDEEHDLSYKQHDGFRYSARDICVYRAKQHNIPVVL 358 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LETL N +Y+ L+LT+RA A P +D++ Q++ AGL + I +R Sbjct: 359 GSATPSLETLNNAITGRYQHLKLTQRASTATPPHIESIDIRNQQLTAGLCESAIEEIRHT 418 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 LQ Q ++FLNRRGFAP+L CH CGW A+C C+ T H HL CH CD Q VPR Sbjct: 419 LQRQQQALVFLNRRGFAPSLFCHHCGWQAKCTGCELPMTFHSHPRHLHCHRCDRQNGVPR 478 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CPSC + G GTEQ+E LA FP P+ RIDRDTTS K A+++ L + G Sbjct: 479 ACPSCKNQAFSHRGSGTEQIELFLAKQFPNTPVIRIDRDTTSSKKAMQKLLEPAYAGTPC 538 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHH P + L + D D L SAD+R E+ QL TQVAGRAGRA G+V Sbjct: 539 ILVGTQMLAKGHHIPGINLAVIADADQGLMSADYRGVEQVGQLVTQVAGRAGRASSTGKV 598 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QTH P+HPL++ L+ +GY++FA Q LAER+ LPP+ ++R+E ++A LQ Sbjct: 599 LIQTHQPDHPLMRVLIAEGYNSFAVQLLAERKHSGLPPYGYSALIRSESKRPENALAILQ 658 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + I ++ + +GP+ A K G R+R+Q L SR L + L+ + Sbjct: 659 LIHGAIKNTG-NKHTITTIGPMAAPIEKIGNRFRFQYQLFCNSRKELHATLKAVLSEVEV 717 Query: 715 IPDSRKVKWVLDVDPI 730 ++R+ +W +D+DP+ Sbjct: 718 KAEARRTRWSVDIDPV 733 >UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4 Tax=Legionella pneumophila RepID=A5II38_LEGPC Length = 725 Score = 805 bits (2081), Expect = 0.0, Method: Composition-based stats. Identities = 299/731 (40%), Positives = 428/731 (58%), Gaps = 13/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + V +P FDY +T G RV VPF + Q R+GIV++ + + LK Sbjct: 4 IYQVCIPHTNRDCFDYEA-LDLTPCIGGRVWVPF-RNQARVGIVINKVCGQQT-GHSLKK 60 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + ++D +P+ + L LW YY P+ +V+ +P R G P + ++ Sbjct: 61 ITSIIDEKPLVPEDLLELCLWVGSYYQSPLSEVIPLVIPKKYRLGLPCSLPTEDFYQLNI 120 Query: 123 QGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + K++ KQ + + L Q I + + +N + AL +L+ + Sbjct: 121 PVEKAKTLISKKAKKQHELIDFLSRHQKGISKQTLKQHGYNGTQIAALLACQAINLSQQV 180 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + + L LN EQA AV +I + +LL GVTGSGKTEVYL V+ Sbjct: 181 ILPTKIPEKLS---PPLALNPEQAVAVASIFEHIHHYQCFLLQGVTGSGKTEVYLHVIAK 237 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 +L QGKQ LV+VPEIGLTPQ ++RF RFN P+ VLHS LN+SER AW AK + +V Sbjct: 238 ILEQGKQVLVLVPEIGLTPQLLSRFTARFNHPITVLHSNLNESERQIAWQLAKENKVKMV 297 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+FTP NLG+I+IDEEHDSS KQ EG RY ARD A+ RAH IPIILG+ATP+ Sbjct: 298 IGTRSAVFTPLPNLGLIIIDEEHDSSLKQMEGVRYSARDTALMRAHLANIPIILGTATPS 357 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LET+ N +QKKY LLRLT +A + P ++DL+ Q VQ GLA + + HL NQ Sbjct: 358 LETIHNCKQKKYNLLRLTHKAASTTPLHYQLIDLRSQMVQHGLALPTLKIIENHLLQQNQ 417 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + +P C +C Sbjct: 418 VLVFINRRGFAPVLLCHQCGWMVDCKACDSHLTLHKQAGQMICHHCGLTQRIPLFCNNCQ 477 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L+PVG GT+++ + L+ FP + RIDRD +K +L L ++++G A+++IGTQ Sbjct: 478 SKELIPVGSGTQRIYEFLSHQFPDTNVLRIDRDEVRKKNSLNSHLDKINKGEAQLIIGTQ 537 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV ++D D ++ DFR+ E QL TQV+GRAGRA G+V++QT+ Sbjct: 538 MLAKGHHFPRLSLVVVVDADAGFYNQDFRAIEHLGQLLTQVSGRAGRAEHAGQVLIQTYL 597 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ GYD FA L R+ ++PP+ ++RA+ FL+ ++ I Sbjct: 598 PDHPLLNLLIQHGYDEFANALLISRQEAEMPPFQFLAVIRAQGKTVNKVAQFLKATKDQI 657 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + PL VLGP PA P++ + R Q+L++ PSR L+ + + S Sbjct: 658 QAHPLK-----VLGPAPAPLPRKANQHRMQLLIKSPSRKVLKSSLTQLREWLTMNKLSNG 712 Query: 721 VKWVLDVDPIE 731 ++W +DVDP++ Sbjct: 713 IRWNVDVDPMD 723 >UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanella marisrubri RepID=Q1N0U9_9GAMM Length = 733 Score = 804 bits (2076), Expect = 0.0, Method: Composition-based stats. Identities = 324/737 (43%), Positives = 453/737 (61%), Gaps = 19/737 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 +AL PL +TFDY + G RV VPFG++ E +G+++ + + ++ ++ Sbjct: 6 YLRIALDKPLNQTFDYEPLANSRMHDYQIGMRVNVPFGQRSE-VGLILDIHNQPDIAPHK 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + E +D PV + + +L LW +YYH P+G+ LF LP+LLR+G+ A ++ Sbjct: 65 IKPIKERIDDSPVLSSELMKLGLWLHEYYHQPVGECLFTLLPVLLRKGQTAKATQEKHYC 124 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQ--GKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + +D ++R+P+Q+ L L++ K+ Q F + + L K L Sbjct: 125 L----EHLDWQKVERAPRQKAFLEWLQKQNHKVSHKQALDAGFTPSIIGQLIDKQLV--- 177 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 SE + + + L LN EQ A+ I S + F+ LL GVTGSGKTEVYL Sbjct: 178 SELWQDNFNALCGDSVEQALALNKEQEQALKGI-SEKNGFNPVLLEGVTGSGKTEVYLQA 236 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA---KN 294 + + + Q KQ LV++PEIGLTPQT+ RF++RFNA + +LHSGLND +RL+AWL+A KN Sbjct: 237 ISSAVTQRKQVLVLIPEIGLTPQTVQRFQQRFNADILLLHSGLNDQQRLNAWLQASRHKN 296 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 +A I+IGTRSA+FT NL I++DEEHD+SYKQQEG RYH RD+AV RA IPIIL Sbjct: 297 EKAQIIIGTRSAVFTEMPNLDFIIVDEEHDASYKQQEGIRYHGRDIAVIRAAKRNIPIIL 356 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+L++L N KKY+ +RLT+RAG+A PA + D++ Q V+ G+A L+ + + Sbjct: 357 GSATPSLDSLHNALVKKYQHIRLTQRAGDASPANLEIYDIRKQSVEHGIADELLQHIEET 416 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ +Q ++F+NRRGFAP L C DCGWI+EC RCD TLHQ HL CHHCD ++ +P Sbjct: 417 LEQGDQALVFINRRGFAPTLYCPDCGWISECKRCDARMTLHQKPAHLHCHHCDHKQTLPH 476 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QCP+C ST + +G GTE+LE L F + RIDRD+T K A+EQ L VH G Sbjct: 477 QCPNCLSTRIQAMGAGTERLETHLEYRFRRHKVIRIDRDSTQGKDAMEQLLQPVHNGEPC 536 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHHFP V LV +L+VD FSADFR+ E+ AQL QVAGRAGR G Sbjct: 537 ILVGTQMLAKGHHFPKVNLVIMLNVDSGFFSADFRAMEKTAQLILQVAGRAGRESHGGRA 596 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT +HPLL L + Y A A L ER++ LPP+ +VRA+ N + A +L Sbjct: 597 IIQTEFADHPLLHLLSEENYHALALALLEERKLHSLPPYAHQALVRADSPNPKEAEQYLH 656 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 +L I PL + + +GP+P+ R GR+R Q+ ++ R RLQ+ + L+ Sbjct: 657 RLLQNI--KPLTENGISFIGPLPSPMELRAGRFRSQLWIRSHQRSRLQNFLKNIEPLLYQ 714 Query: 715 IPDSRKVKWVLDVDPIE 731 KV+W LDVDP + Sbjct: 715 QKGFNKVRWSLDVDPSD 731 >UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXH1_9BACT Length = 762 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 241/743 (32%), Positives = 388/743 (52%), Gaps = 23/743 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A V +PL + F Y +P + + G RV+ PFG + G V ++ + + Sbjct: 23 FAEVVFNIPLNKLFHYSVPPDLRELLTPGMRVKAPFG-NKVITGFCVGLTTIPSV--YKT 79 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW-- 118 K ++ +LD+ P+ ++ R+ W + YY G+ + +P ++R+G Sbjct: 80 KDLMGILDAFPLADETMLRITKWLSSYYCCGWGEAIHAVIPPVVRRGAKEKIDIFVTCGK 139 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKI-----WRDQVATLEFNDAALQALRKKGL 173 T + L S KR+ KQ + L L +D + N + L+ L ++ L Sbjct: 140 PLTAFEKETILQSKKRAIKQARVLEFLFNQAQNTEIRAKDLMKATGGNMSMLRQLERENL 199 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKT 231 L + + S + L L+ EQ A I S LL G+TGSGKT Sbjct: 200 LRLEERQADAVNALKGGGASRQHLALSEEQQAAFTLIKEKLSEPSQGIILLHGITGSGKT 259 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+YL + +L QGK+AL +VPEI LT Q+I R +ERFN V VLHS L + + W Sbjct: 260 ELYLQTIAKLLEQGKKALFLVPEISLTSQSIQRIKERFNN-VAVLHSHLQGAFHHAQWKD 318 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 K G +V+G RS++F P K++G+I++DEEH+++YKQ+ RY+ARD+A+ RA E Sbjct: 319 IKEGRVDVVVGARSSIFAPLKDVGLIILDEEHENTYKQENSPRYNARDIAILRATYENAM 378 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLAPAL 407 +ILG+ATP+LE+ ++ Y + L++R G + ++D+ + ++ ++ L Sbjct: 379 VILGTATPSLESYYEAEKGDYTKIVLSKRIGTLQLPQVEIVDMLEEVRKKRGYHVVSQRL 438 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 M+Q L QVILFLNRRGF P + C CG++ +C RCD T H+ + + CH+C Sbjct: 439 EYYMKQALSRREQVILFLNRRGFTPYIHCKRCGFVLKCHRCDIPLTFHKKLNIVLCHYCH 498 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++ P CP C + ++ G GTE++E+ +A FPG I R+D D+ G+ E+ L Sbjct: 499 AEAIPPESCPDCMANYINYRGFGTEKIEEVIAKKFPGYNILRMDSDSMRSHGSHEKALKA 558 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G +IL+GTQM+AKG FP+VTLV ++ D L DFR+ ER QL +QVAGR GR Sbjct: 559 FGEGEFQILLGTQMIAKGLDFPNVTLVGVISADTMLNLPDFRAGERTFQLISQVAGRTGR 618 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 K G V++Q+ +P H + Y+ FA++ L RR + PP+ + + + Sbjct: 619 GQKGGRVIVQSFNPRHYSITYAAAHDYEGFAKKELEYRRPLNYPPFGRMARIIFRGASEK 678 Query: 648 HAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + + + + ++ +L +LGP PA K +RW +LL+ R+ + Sbjct: 679 NTEEKASVIAGKLKEIAKESNNQLQILGPSPAPVMKINNLFRWHLLLKAKDHQRIHDAL- 737 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 L + +T+ ++ V+ ++DVDP Sbjct: 738 --LCVADTLKPTKGVQSLVDVDP 758 >UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Psychrobacter RepID=Q1Q969_PSYCK Length = 793 Score = 803 bits (2074), Expect = 0.0, Method: Composition-based stats. Identities = 320/775 (41%), Positives = 447/775 (57%), Gaps = 56/775 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV--------------KAGCRVRVPFGKQQERIGIVVS 48 + VALPVPL R FDY LP ++ + G RV V FG+Q IGIVV+ Sbjct: 26 LVQVALPVPLYRVFDYSLPSDISALPNASPNNSSIQLPQIGSRVEVSFGRQ-TLIGIVVA 84 Query: 49 VSDASE--LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ 106 ++ +PLN+LK + + LD+E + +S+ +L W A YYH+P+G+VL LP L+RQ Sbjct: 85 HIAQADTSVPLNKLKPINKCLDAESILDNSLLKLAYWLARYYHYPLGEVLAVILPTLVRQ 144 Query: 107 GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR-QGKIWRDQVATLEFNDAAL 165 G+P + + +W D + + KQQ + L Q D + A L Sbjct: 145 GKPL-DLLITHWRILPHITDDDFRTNAKKQKQQFDMLKLHGQHGASEDVLLLEGMERAFL 203 Query: 166 QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLA 223 + L KGL + + T+ ++ L LN EQ AV AI +A ++ ++ +LL Sbjct: 204 KTLEDKGLIE---RYIQPKQAPTSVKLAKMPLDLNEEQQLAVAAIVAAHESKCYTGFLLN 260 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 G+TGSGKTEVYL ++ VL GKQ L++VPEIGLTPQT ARF RF A + +LHSG+N++ Sbjct: 261 GITGSGKTEVYLQAMQAVLEAGKQVLILVPEIGLTPQTRARFASRFAAHIVLLHSGMNNT 320 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 RL W + G A I+IGTRSA+ PF +LG+IV+DE HD SYKQQ+ RYHA D+A+Y Sbjct: 321 HRLQGWQDCRTGHAQIIIGTRSAVLYPFADLGLIVVDEAHDGSYKQQDTLRYHAADVALY 380 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ------ 397 R +IP++LG+ATP+LE L V + K +L+ R GNA+PA ++D + Q Sbjct: 381 RGFQAKIPVVLGTATPSLEHLKLVDEGKLVECQLSTRPGNAKPAPMQLIDARLQSTHQQT 440 Query: 398 -----KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 + GL ALI +RQ L+A +QV++FLNRRG+AP LLC CGW A+CPRCD + Sbjct: 441 QDDGARYDTGLTDALIGAIRQTLEAGDQVLIFLNRRGYAPVLLCEACGWQADCPRCDAHL 500 Query: 453 TLH----------QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 T+H + +L+CHHCD Q +P CP CGS +L G+GT +L + L +F Sbjct: 501 TVHYNNQAQRSNYSSNSYLKCHHCDWQAYIPTVCPDCGSQNLDAKGMGTTRLSENLHAIF 560 Query: 503 PG-------VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 PI +IDRDTT RK + E ++ G IL+GTQM+AKGHHFP+VTLV Sbjct: 561 ANPQTSKALYPIIQIDRDTTRRKDSWENIYQRINAGNPAILVGTQMVAKGHHFPNVTLVC 620 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYD 615 L + D SADFRS E AQL QVAGRAGR K G V++QT P++ LL L+ GY Sbjct: 621 LPNADRGFLSADFRSPEHTAQLMIQVAGRAGRGDKSGRVLIQTLQPDNALLLKLVKDGYL 680 Query: 616 AFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGP 675 +FA + L ER+MM LPP + ++R E L+ ++ L VLGP Sbjct: 681 SFARELLQERKMMGLPPHSHAALIRCEGKTLAATTQALKDAIAVL----PTGHNLAVLGP 736 Query: 676 VPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + A K+ R+ Q+LL R +L H++N + T+P ++ +K LD+DP+ Sbjct: 737 IDAPMSKKNSRYHAQLLLLAKDRQQLHHVLNHWWQPVLTLPSAKYLKLTLDIDPV 791 >UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHU2_9BACT Length = 736 Score = 800 bits (2068), Expect = 0.0, Method: Composition-based stats. Identities = 304/736 (41%), Positives = 441/736 (59%), Gaps = 9/736 (1%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP + V +PVPL F Y +P+G K G R++VPFG + IGI + SD+S+ Sbjct: 1 MPGDLIDVLVPVPLLEKFTYKVPKGYQKRKFKRGVRLKVPFGNR-ILIGIFWNYSDSSKP 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 K + E+LD + + ++ L W++ YYH+P+G+V+ + P LR+G+ A Sbjct: 60 KRASYKLIKEILDEDTLLDKALLDLADWSSRYYHYPLGEVITYFFPPSLRKGKEARFKES 119 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLC 174 YW T++G DL LKR+P Q++ L LR+ G + + + + L L KK L Sbjct: 120 TYWKVTDKGDFFDLAELKRAPSQREGLELLRENGDLSQKSLRAYGISSVTLNNLYKKELI 179 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 S + A+ ++ L EQ +V AI +LL GVTGSGKTEVY Sbjct: 180 QKISLEQLPVNSHQTEAIDEKK--LTPEQNISVQAISGEFGNDKTFLLNGVTGSGKTEVY 237 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + ++ QGKQALV++PEIGL PQ RF+E F V HS N+ ERL WL A+ Sbjct: 238 LRCIRKLVDQGKQALVLIPEIGLAPQAERRFKELFGDRVASFHSAKNERERLDVWLGAQR 297 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G IVIGTRS++F P KNLG+IV+DEEHD+S+KQ E +RY ARD+A+YRA +IP +L Sbjct: 298 GLYDIVIGTRSSVFIPMKNLGMIVVDEEHDASFKQTERFRYSARDIALYRAKLSKIPTLL 357 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 SATP++E++ N KY+LL L +RA A LDLKG+ ++ G + L+ + Sbjct: 358 ASATPSVESMSNALNGKYQLLTLKQRATGADLPSFVPLDLKGKTLKEGFSEKLLEEIESE 417 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L +NQV++FLNRRGFA +++C CGWI+ C RCD + T+H HL+CHHC++++P+ Sbjct: 418 LNKNNQVLIFLNRRGFACSMICKSCGWISHCDRCDAHMTVHSNPSHLQCHHCENKKPLFT 477 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CPSC G+GTE++E L F P+ RID D+T +K + + L + G Sbjct: 478 ICPSCQHNEFESYGIGTERIEGYLKKKFRQFPVLRIDSDSTRQKDSFKNYLKIIDEGKPL 537 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHHFP+VTLV +LD D +FSADFR +ER AQL TQV+GRAGR K G+V Sbjct: 538 ILVGTQMLAKGHHFPEVTLVGILDADSGIFSADFRGSERVAQLITQVSGRAGREKKPGKV 597 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQT+ EHP ++ LL Y+ F ++ + +R + PP++ V ++AE N + FL Sbjct: 598 ILQTYCQEHPQIEELLKGDYETFIKKIIEDRASTKSPPFSFQVKLQAESFNGLLSRDFLS 657 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + S L ++ + +GP+P+L K+ G +RW++ L SR L + + + + Sbjct: 658 SCLDYLNKSQLMNKDIKTIGPLPSLMEKKSGVYRWEVSLFSSSRKSLHSLTDHLQSYLYL 717 Query: 715 IPDSRKVKWVLDVDPI 730 +RKV+W +DVDPI Sbjct: 718 PKQTRKVRWSIDVDPI 733 >UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID=B1IIM2_CLOBK Length = 735 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 225/739 (30%), Positives = 385/739 (52%), Gaps = 21/739 (2%) Query: 2 PVAHVALP---VPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASEL 55 A + + + L + F Y +PE + ++ G RV+VPFGK ++I G V+ + + E Sbjct: 3 KYAGIIVNNSSIKLDKLFTYAIPEELNKKIRIGHRVKVPFGKGNKKIDGFVLKLYENYED 62 Query: 56 PLN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 +K++ + + +P+ + L+ + Y + + +P + +G Sbjct: 63 ENKVSIKSISNICEEDPLLDLNRVNLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKKEN 122 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV-ATLEFNDAALQALRKKGL 173 + + +G+ LK + +Q L G ++ + F+ +++ L K G Sbjct: 123 FIFIYKDLEGKY-----LKENYEQIYNFIKLNDGVYNKNVLNKKFGFSLSSINTLIKHGF 177 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 ++ + + + E LN +Q+ A+ I ++ +L+ GVTGSGKTE+ Sbjct: 178 LIQKNQVV--NRYNEKIYGNYEEKILNGDQSLALYRILNS--NRKLFLIHGVTGSGKTEI 233 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ +++ ++ + K ++++VPEI LTPQ + RF+ RF + + HS L++ ER W++ K Sbjct: 234 YMHLVKKLIEKDKDSIILVPEISLTPQMVERFKGRFGKSIAIFHSKLSNGERFDEWMRVK 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GE + IG RSA+F PFKNLG I+IDEEH+SSYK +Y+ARD+A R +E +I Sbjct: 294 RGEVKVAIGARSAVFLPFKNLGTIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKVI 353 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP+LET + K L+ + R A ++D++ + + + L Sbjct: 354 LGSATPSLETYYRSKNKIIDLITIKERIEGASMPEVKIVDMREELMSGNKSIFSRELFED 413 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + L+ Q+ILFLNRRGF+ + C +CG++ +C CD T H + LRCH+C + Sbjct: 414 ISTRLEKKEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGAST 473 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 +P+QCP C S ++ G GTE++E+ + FP V R+D DTT K A E + Sbjct: 474 RIPKQCPKCNSKYVKYFGAGTEKVEKAIKKCFPKVKTLRMDLDTTRTKDAYENIYNTFKK 533 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A ILIGTQM+AKG F +VTLV +L D +L D+RS ER QL TQV+GRAGR K Sbjct: 534 GEADILIGTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKK 593 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +G+V++Q+++PE+ + + Y+ F + + R+ M PP++ +++ Sbjct: 594 EGKVLIQSYNPENYSIASAAKSDYEGFYNKEIKIRKDMNYPPFSKILLINLSSKYENKLI 653 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 ++ ++ + + L +LGP P+ K +RWQI+L+ + I + Sbjct: 654 KNTHKVGIILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGDIMKEIQKIV- 712 Query: 711 LINTIPDSRKVKWVLDVDP 729 + ++ +D++P Sbjct: 713 YTSLEQVYNDIRVSIDINP 731 >UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus capsulatus RepID=Q604F0_METCA Length = 733 Score = 798 bits (2062), Expect = 0.0, Method: Composition-based stats. Identities = 334/738 (45%), Positives = 458/738 (62%), Gaps = 19/738 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V VA+P+P R FDYL P G+ ++ G R+ VPFG + R+G +++V + + Sbjct: 4 VVRVAVPIPAYRCFDYLAPAGVPLESLLPGVRLSVPFGNR-IRVGYLIAVVETPGCEVER 62 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ VLD+ P+ + + +LL WAA YYHHP+G+V+ A P+ LR+G A A Sbjct: 63 LRPAAAVLDAAPLLSETDLKLLRWAARYYHHPLGEVIQSAFPVHLREGGGAELARPSGLV 122 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALR--QGKIWRDQVATLEFNDAALQ----ALRKKGL 173 T G A+D + +R+P Q++ LR + + ++A L + ++ L ++G Sbjct: 123 LTPAGAALDPATFRRAPVQRRLFEVLRGRERPLPASRLAELAGSGRTVRDAARRLVERGW 182 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + R AV+G L+LN Q AV I + +LL GVTGSGKTEV Sbjct: 183 AEWVDL-----QDRRIPAVAGPPLQLNPAQLGAVDEISQNLGRYGVFLLEGVTGSGKTEV 237 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ V+ V+ +G+QALV+VPEI LTPQ R RER AP+ V HSGL+++ER +AWL + Sbjct: 238 YIEVIRRVITRGEQALVLVPEISLTPQLERRLRERIEAPLAVFHSGLSETERAAAWLGFQ 297 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GE +++GTRSA+F P + GVIV+DEEHD S+KQQEG+R+ ARD+AV RA IP++ Sbjct: 298 KGEVGVLLGTRSAVFAPMRWPGVIVLDEEHDRSFKQQEGFRFSARDVAVMRARMADIPLV 357 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQ 413 GSATP+LE++ NVQ+ +Y L L RAG A VLD++ +++Q GL+ LI MR Sbjct: 358 AGSATPSLESIRNVQRGRYVRLVLPARAGAAVAPRYRVLDIRARRLQDGLSEGLIAAMRD 417 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L A +QV+LFLNRRGFAPAL+CH CGW+A C RCD LH + LRCHHC ++ +P Sbjct: 418 TLAAGDQVLLFLNRRGFAPALVCHGCGWVARCRRCDANLVLHARESRLRCHHCAAEHGLP 477 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 CPSCG L P+G+GTE++++ L LFP V ++RIDRD+T + +LE+ L V +G Sbjct: 478 GCCPSCGQEDLRPLGVGTERVDEALRRLFPEVGVARIDRDSTRGRRSLERMLERVQQGEV 537 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQMLAKGHHFP VTLV +LDVD +S DFR+AE AQL QVAGRAGR GK G Sbjct: 538 GILLGTQMLAKGHHFPGVTLVGILDVDAGFYSTDFRAAEHTAQLIVQVAGRAGRGGKPGT 597 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V+LQT HP+HPLLQ LL GY FA LAER LPP+ + RAE + FL Sbjct: 598 VLLQTRHPDHPLLQRLLRDGYPGFAAAELAERESACLPPFGYQALWRAESKELALSMDFL 657 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 +LR A + LGP PA P++ GR+R Q+ L+ R L ++ LA + Sbjct: 658 ARLREEADGKNGA---VHWLGPAPAPMPRQAGRYRAQLWLKSARREELHAVLTDALARLQ 714 Query: 714 TIPDSRKVKWVLDVDPIE 731 P+ R+V+W LDVDP++ Sbjct: 715 ETPE-RRVRWSLDVDPVD 731 >UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea blandensis MED297 RepID=A4BGC2_9GAMM Length = 730 Score = 794 bits (2051), Expect = 0.0, Method: Composition-based stats. Identities = 318/727 (43%), Positives = 427/727 (58%), Gaps = 13/727 (1%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 VA+P P Y + V GCRV VP GK+ IG+VV +L + +L+AV Sbjct: 14 VAVPGPFSTPLTYACSK--PVAPGCRVEVPLGKRSV-IGVVVEQRPDEQLDMAKLRAVER 70 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 +LD PV + L W + YY H ALP LLR+G A + T G+ Sbjct: 71 ILDDTPVLPTDILALAEWMSRYYLHEFASPYLLALPGLLRKGEAATLPTETWLNLTVAGE 130 Query: 126 AVDLNSLKRSPKQQQALAALRQ-GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 A+D LKRS + Q + L+Q G++ + F QAL KK L L ET + Sbjct: 131 AIDPAQLKRSTQHQAIMTQLQQSGRLPWSHLRAQGFTRPQAQALEKKQLLSL-DETCDND 189 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 ++ L LN EQ+ A+ + A F+ +LL G+TGSGKTEVYL +E L++ Sbjct: 190 PIPPTGQLAEPSLTLNDEQSAALDQVSEA--RFAPFLLEGITGSGKTEVYLQAIERCLSR 247 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 G +ALV++PEIGLTPQT+ARF RF +LHSGL D +R AWL+A +G+AAIVIGTR Sbjct: 248 GHRALVLIPEIGLTPQTVARFERRFRDRCVILHSGLTDKQRTLAWLQANHGQAAIVIGTR 307 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL 364 SA+ TP +LG+IVIDEEHD+S+KQQ+ RY ARD+A+ RA IPIILG+ATP+LETL Sbjct: 308 SAVLTPIPDLGLIVIDEEHDASFKQQDTLRYQARDVALKRAQLADIPIILGTATPSLETL 367 Query: 365 CNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILF 424 N ++ L+L RAG AR ++D++ Q+ Q GL+ L+ R+R+HL NQV+LF Sbjct: 368 HNALTGRFGHLQLKERAGGARLPTIELIDMRRQQQQHGLSERLLIRIREHLNDGNQVLLF 427 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRGFAP+ CH CGWIA+C CD + T H H CHHC + P P CP C S L Sbjct: 428 LNRRGFAPSWFCHSCGWIADCVFCDAHLTYHHHGHINICHHCGHREPPPTVCPDCHSRDL 487 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 +G GTE+ EQ L F VPI R DRD S + EQQL + G I++GTQMLAK Sbjct: 488 SAMGTGTERAEQLLESAFADVPIIRFDRDVASTRLKFEQQLEKTAEDGPAIIVGTQMLAK 547 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 GHHF VTLV + D DG LFSAD R+ ER QL TQVAGR+GR + GEV++QT++P++P Sbjct: 548 GHHFHRVTLVGVWDSDGGLFSADLRAKERMGQLLTQVAGRSGRGERTGEVLIQTYYPDNP 607 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 + Q L Y +FA L ERR +LPP+ +VRA+ + A L + + +L Sbjct: 608 IFQPLTEHDYRSFAFSLLEERRKTRLPPFGFVAVVRADSAFAERAEELLATMTSYLLEHH 667 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 + VLGP+PAL +R G+ R+ +++Q R L + +R+V W Sbjct: 668 A----VRVLGPLPALLSRRAGKHRFMLIIQADRRSALHEALVPLHRHY--PRQTRQVSWH 721 Query: 725 LDVDPIE 731 +D+DP + Sbjct: 722 IDIDPAD 728 >UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbiobacterium thermophilum RepID=Q67PR6_SYMTH Length = 741 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 250/733 (34%), Positives = 365/733 (49%), Gaps = 20/733 (2%) Query: 13 PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 + F YL+P + + G VRVPFG ++ +G+ V ++ + LK + +L Sbjct: 11 DKLFTYLVPRSLAGRLTPGQWVRVPFGGRR-LVGLYVGPAERPPEGVA-LKEIAGLLPDI 68 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P + +L W AD Y L LP R+ Y + +A+ Sbjct: 69 PPIPAPLVQLARWTADRYLSTFPAALRLLLPTEARRQEVRTLTITNYRLNVDDVEALVSE 128 Query: 131 SLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDA-ALQALRKKGLCDLASETPEFSDW 186 +R+P+Q + LA + + ++ +A L + A ++ +KG + Sbjct: 129 LRRRAPRQAELLAYMARVGGEAERAQVLADLGESIAGPIRVALEKGWLTAGRVARRRDPF 188 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW----LLAGVTGSGKTEVYLSVLENVL 242 + L EQ A+ +I A+ L+ GVTGSGKTE+YL + V Sbjct: 189 ADEHVEPAPPPVLTPEQEQALASIRQELIAPPAFRQPVLVHGVTGSGKTELYLRAIALVR 248 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 GK A+ +VPEI LTPQ I RFR RF V VLHS L+ ER W + + GE +IV+G Sbjct: 249 EMGKNAICLVPEISLTPQMIQRFRARFGGDVAVLHSALSAGERFDEWQRIRRGEVSIVVG 308 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAVYRAHSEQIPIILGSATPAL 361 RSA+F PF+N+G+I+IDEEH+ SYKQ+ YHAR++A RA E ++LGSATPAL Sbjct: 309 ARSAVFAPFENVGLIIIDEEHEQSYKQEAPPPAYHAREVAAERARLEGALLVLGSATPAL 368 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQAD 418 E+ Q YRL+ L R N ++D++ + + AL+ + Q L A Sbjct: 369 ESFHLAQTGVYRLVSLGHRIDNRPLPPVTLVDMREELRAGNRSIFSRALVEALDQTLSAR 428 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLNRRG+ ++C CG +C C T H HL CH+C PVP CPS Sbjct: 429 EQAILFLNRRGYNTFIMCRSCGEAIQCVHCAVALTYHLGDDHLACHYCGYTAPVPLVCPS 488 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CGS + +G GTE++EQ L L+P V ++R+D DTT RKGA L +L+G Sbjct: 489 CGSDKIRHLGAGTERVEQELQRLYPHVRVARMDVDTTRRKGAHAAILKRFADHEVDVLVG 548 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+ KG FP VTLV ++ D +L DFR+AER QL TQVAGRAGR + G V++QT Sbjct: 549 TQMITKGLDFPGVTLVGVVLADTSLNLPDFRAAERTFQLVTQVAGRAGRGDRPGRVIVQT 608 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + P+H LQ Y F + + R+ + PP+ + + + Q + Sbjct: 609 YQPDHAALQAAAEHDYHRFFAEEIRFRQELDYPPFAHMIHLVISGEDEAAVAATAQNVHR 668 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN-TIPD 717 ++ +LGP PA K G++R+ ++L+ P + + A Sbjct: 669 VLAEGGFGG---QILGPAPAPLAKLRGKYRYHLVLKGPDVRAMAAEVKACFAAARGKWRA 725 Query: 718 SRKVKWVLDVDPI 730 SR V +DVDP+ Sbjct: 726 SRSVSLSVDVDPV 738 >UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULA1_AKKM8 Length = 738 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 267/739 (36%), Positives = 387/739 (52%), Gaps = 17/739 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLP-EGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M A + + DY +P E VK GCRV+VP + + G V+++S+ + + Sbjct: 1 MQAARILVDGQSDLVLDYGIPPEAGDVKPGCRVQVPL-RNRTATGTVLTLSEPAPAWKDR 59 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK +++++D EP+ + + L WAADYY + ++ LP +RQ A + Sbjct: 60 LKPILKLIDPEPLISPVMMNLASWAADYYSVALDQMIRCLLPETVRQENTAEKMRKMVYL 119 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND-AALQALRKKGLCDLAS 178 + +++P+Q Q L K +A ++L KG L Sbjct: 120 EKTPAREELDALYRKAPRQAQMLDYFSSAKQQSAPLAAFGAGALNVARSLEAKGFISLKE 179 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLS 236 E V + ++LN++Q A+ I + AA+ LL GVTGSGKTEVYL Sbjct: 180 EAVHRDPSTGEQFVPTQPMKLNSQQQKALEEITAMCAAERKKPVLLQGVTGSGKTEVYLQ 239 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERF---NAPVEVLHSGLNDSERLSAWLKAK 293 + ++ GK AL+MVPEI LTPQT+ RF+ RF + V VLHS L+D ER W + Sbjct: 240 AVSQIVKSGKSALIMVPEISLTPQTVQRFKSRFAELPSSVAVLHSLLSDGERFDEWHAIR 299 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 +G+A IVIG RSA+F P +NLG++++DEEHD+SYKQ+ RYH RDLAV RAH E ++ Sbjct: 300 SGKARIVIGPRSAVFAPLQNLGLVIVDEEHDASYKQESSPRYHGRDLAVLRAHLENCAVL 359 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALIT 409 LGSATP+LE++ N KY L++LT RA + + +LD+K + ++ L Sbjct: 360 LGSATPSLESIHNALIGKYSLVKLTERADGQQLPLIRILDMKTEGRNKSGPNVISERLRM 419 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + + L QVIL LNRRGFA ++ C DCG + C C T H+ + L CH C + Sbjct: 420 SIDRRLDKGEQVILLLNRRGFARSIQCPDCGHVVTCLHCSLPLTYHRTEDRLMCHLCGFK 479 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 PR CP C S +++ G GT+++E+ L FP I+R+D D RK A+ L + Sbjct: 480 ALPPRSCPECRSANILLQGYGTQKVEELLRRTFPAARITRVDADVARRKNAVRTILNQFR 539 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 IL+GTQM+AKG FP+VTLV +L+ D L D R+ ER QL TQVAGRAGR Sbjct: 540 AHKIDILLGTQMIAKGLDFPNVTLVGVLNADLGLHIPDPRAGERTFQLLTQVAGRAGRGD 599 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV++QT P+ P LQ + D FA Q L RR LPP+T ++ + A Sbjct: 600 LSGEVIIQTFTPQSPSLQYARHHDTDGFAAQELEMRRTFDLPPFTHIAVLTIRSQHESMA 659 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q L + + P+PA P+ G++R+QI ++ PS L + Sbjct: 660 EFATQTLAARLRGMLPPPATMT--DPMPAPIPRAHGQFRFQITVKGPSARILSRTLRK-- 715 Query: 710 ALINTIPDSRKVKWVLDVD 728 L+ + V+DVD Sbjct: 716 -LVQEAGLGEDLTAVIDVD 733 >UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K0_NATTJ Length = 749 Score = 790 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 249/756 (32%), Positives = 386/756 (51%), Gaps = 34/756 (4%) Query: 1 MPVAHV-ALPV---PLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASE 54 M HV L + L R F Y + + + G V+VPFGK+ +V V+ + Sbjct: 1 MKYCHVTILDIVSDELDRQFTYKITPHLESRVTRGSLVKVPFGKRNVN-AVVNEVTGTTS 59 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 L +++K V +VL +P + L W + YY + +P L+ G Sbjct: 60 LSKDKIKNVNQVLSDQP-LPEDIMELAQWMSSYYLCSLSKAYNIMVPQGLKSG--VNRIY 116 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKG 172 Y + +A L ++PKQ++ L L + L+ + +++L KG Sbjct: 117 KKYVSIADITEARKLLDSAKAPKQRKVLERLLSNSPLALDQLLDELKITKSPVESLYGKG 176 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA---------DTFSAWLLA 223 + ++ S + Q T + I + +LL Sbjct: 177 IINIQSSRSYREPIDFKQIEEYKPKEPTQAQKTVLKLIKNQGRGSCDNTSPKKPKPFLLF 236 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKTE+YL ++E+ L QG Q +V++PEI LTPQTI RF RF V V HS L+ Sbjct: 237 GVTGSGKTEIYLQLIESYLQQGLQTIVLIPEISLTPQTIERFVGRFGNQVAVTHSKLSHG 296 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 ERL W K G+A IV+G RSA+F PF NLG+I+IDEE + SYKQ+E RYHAR++A Sbjct: 297 ERLDQWEKMLWGKANIVVGPRSAVFAPFSNLGLIIIDEEQEGSYKQEELPRYHAREVAER 356 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG- 402 R + ++LG+ATP+LE++ V+ Y L L R G+ V+D+K + + Sbjct: 357 RCQFKDGQLLLGTATPSLESIHRVKSDDYNLAELPERVGDVELPDISVIDMKEEFQKGNK 416 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + LI ++++ Q ILFLNRRG++ LLC +CG+ CPRC+ T H++ + Sbjct: 417 SVFSRELILKLKEVTDKGEQTILFLNRRGYSTFLLCRECGYTVTCPRCEVTLTYHKSINQ 476 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L CH+CD P+ + CP C S + G GT+++E+ L P + R+D DTT +K + Sbjct: 477 LLCHYCDYTEPLSKFCPDCNSDKIKEFGTGTQKIERELKKYLPDLKTIRMDVDTTRKKNS 536 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 ++ L + A +LIGTQM+AKG FPDV+LV ++ D AL DFR+ E+ QL TQ Sbjct: 537 HQELLGKFKNKQANVLIGTQMIAKGLDFPDVSLVGIITADTALNLPDFRAGEKTFQLLTQ 596 Query: 581 VAGRAGRAG--KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 VAGRAGR ++G+VV+QT++P+H ++ + + F + LA R+ + PP+ + Sbjct: 597 VAGRAGRRDNNQRGQVVIQTYNPDHYSIEAVKNENVRKFTGEELALRKKLGYPPFKRMIR 656 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---H 695 + Q +++L S L D VLGP P PK +RW ++L+ + Sbjct: 657 IMLRSPYEQAVSHQVEEL-----SQKLQDMGYEVLGPTPCPIPKIKDEFRWHLMLRLDLN 711 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + + + L N + K++ +DVDP+ Sbjct: 712 NQEIIDEQLRDYLLTTKNNLSQQGKIRMAIDVDPLN 747 >UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium RepID=B1YIQ3_EXIS2 Length = 774 Score = 789 bits (2037), Expect = 0.0, Method: Composition-based stats. Identities = 259/781 (33%), Positives = 403/781 (51%), Gaps = 66/781 (8%) Query: 3 VAHVALPVP---LPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 +A V + V + R FDY +P+ + V G RV VPFG + +GIVV+V D ++L Sbjct: 2 IAEVIVDVAAATVDRPFDYEVPDLWRDLVV-PGMRVEVPFGPR-ALLGIVVAVKDETDL- 58 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHP------------------------- 91 +K +V VLD P +T + +L + ++ Sbjct: 59 -ARIKPIVRVLDETPTYTEELLQLSSYLSETTLCYQATALLAMLPAALKVSYDKLILAEN 117 Query: 92 --------------IGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPK 137 +V L + + L+S K Sbjct: 118 PRLIHWNQKKISQFPSEVQQQILVAAQNGDIRLQPIVKEKKTSKTDKRIRLLDSTIELSK 177 Query: 138 QQ------QALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 Q + R +W + + L+ + L +L KKG+ + + + + Sbjct: 178 QATKQILLREYLMARPEVLWSEVMHELDLTVSILNSLEKKGVITVETIDVNRNPYEHLVQ 237 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 L T Q AV AI ++ +T S +LL GVTGSGKTEVYL + +L +G+QA+++ Sbjct: 238 DIFVPSTLTTHQQDAVDAITASEET-STFLLHGVTGSGKTEVYLESIHTMLQRGRQAILL 296 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEI LTP + RF+ RF V VLHSGL+ E+ W K +GE +V+G RSA+F P Sbjct: 297 VPEISLTPMMVKRFKRRFGDRVAVLHSGLSLGEKYDEWRKISHGEVDVVVGARSAIFAPL 356 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 N+GVI++DEEH+++YKQ+E RYH RD+A +RA + P++LGSATP LET Q+ Sbjct: 357 TNIGVIILDEEHETTYKQEENPRYHTRDVATWRAAYHKCPVVLGSATPILETYARSQKGV 416 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRR 428 YR L L R G P ++ ++D++ + ++ + L+ ++Q ++ Q +L LNRR Sbjct: 417 YRYLPLKERFGGELPPVE-IIDMRKELERSNRTPFSLPLVEGIKQRIERGEQTVLLLNRR 475 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+ +LC DCG +CP C T HQ Q L+CH+C + +P+ CPSC S + G Sbjct: 476 GYTTFVLCRDCGETLQCPHCAVNLTYHQHQDCLKCHYCGFEAAMPKTCPSCESKKIRQFG 535 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GT+++E+ LA L P I R+D+DTTSRKGA E+ L RG IL+GTQM+AKG F Sbjct: 536 TGTQKIEEELAHLIPEAKIIRMDQDTTSRKGAHEKLLNAFERGEGNILLGTQMIAKGLDF 595 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P+VTLV ++ D L DFR++ER QL TQV+GRAGR G+ ++QT++P+H ++QT Sbjct: 596 PNVTLVGVIAADATLGIPDFRASERTFQLITQVSGRAGRGALAGQSIIQTYNPDHYVIQT 655 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 Y+AF ++ + R++ PP+ +V + A + + + L + Sbjct: 656 AKRHDYEAFYQREMQLRKLGGHPPFWFLGLVTISAAHPLEAQAEAEAIAGEL--RHLESD 713 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 L V GP+ A + +R+Q++L+H + ++ + LAL +KV+ +D++ Sbjct: 714 DLIVNGPLEAPLARLKNMYRYQVILKHKGQEEVREALRAMLAL----RIKQKVQVTVDLN 769 Query: 729 P 729 P Sbjct: 770 P 770 >UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYX5_HALNC Length = 774 Score = 787 bits (2034), Expect = 0.0, Method: Composition-based stats. Identities = 328/736 (44%), Positives = 447/736 (60%), Gaps = 14/736 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M VALP PL F Y +P ++ +AG RV VP GK Q R+G++ S ++ + + Sbjct: 46 MVYWQVALPGPLQMLFTYGVPADVSARAGMRVWVPLGKGQ-RMGVLWSPAEKETEWV--I 102 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V+ VLD EP+ + L WAADYYH P+G+ + AL LRQGR W Sbjct: 103 KPVLSVLDDEPLLDEELLACLGWAADYYHFPLGETVLAALAPSLRQGRS---LHELAWRI 159 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 G+ + R +Q+ L + Q + +F A L GL + E Sbjct: 160 LPSGEQALADGTLRGARQRALLERIAQTPQGVSESQLRDFPKAVRLRLADLGLIEP-FEQ 218 Query: 181 PEFSDWRTNYAVSGERLR---LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S W +SG +L LN Q+ AV A+ + + F WLL GVTGSGKTEVYL++ Sbjct: 219 MMPSTWPVLAEMSGNKLPAPDLNEAQSAAVSAVAACLENFGVWLLEGVTGSGKTEVYLNL 278 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VLAQG+Q L++VPEI LTPQ + RF +R VLHSGLND +RL+AWL A++G+A Sbjct: 279 ISRVLAQGRQVLILVPEIALTPQLVTRFTDRLGLVPAVLHSGLNDGDRLNAWLAARSGDA 338 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +VIGTRSA+F PF +LG+IV+DEEHD S+KQ EG+ YHARD+A++RA +PI+LGSA Sbjct: 339 TVVIGTRSAVFQPFADLGLIVVDEEHDGSFKQSEGFGYHARDVAIWRARRLGVPIMLGSA 398 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L NV +Y LL L RAG A +LD++ Q+++ GL+ L+ + HL A Sbjct: 399 TPSLESLRNVSLSRYHLLTLPERAGGAAMPDIRLLDVRQQRMRGGLSDDLVAAIETHLLA 458 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+L+LNRRG+A LLCH CGW+AEC CD + T H+ + LRCHHC +R P CP Sbjct: 459 GGQVMLYLNRRGYASNLLCHACGWVAECAHCDSFMTWHRGVNRLRCHHCGFERQPPSVCP 518 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 +C S L P GLGTEQLE L LFPG I R+DRD SR G L+++LA + AR+++ Sbjct: 519 NC-SATLSPRGLGTEQLEDVLTGLFPGFGIERLDRDALSRVGELDRRLARIQSSEARLIV 577 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ+L KGH FP V+LVA++D D ALF+ DFR AERFAQ QVAGRAGRA + G V++Q Sbjct: 578 GTQILVKGHDFPHVSLVAVVDADQALFANDFRGAERFAQQLIQVAGRAGRASRAGTVLVQ 637 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH PEH L L++ GY +FA+ LAER LPP + ++RA+ + L + Sbjct: 638 THQPEHVGLNRLIHAGYASFAQTLLAERAEAGLPPVRAAAMIRADARDADAPRELLTHMA 697 Query: 658 NLILSSPL--ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + + AD L V GPVPA +R GR+R+Q+L+ R RL ++ L Sbjct: 698 DWLHEHLADPADSPLDVWGPVPAPLARRAGRYRYQLLILADDRPRLHAALSQ-LESWQGT 756 Query: 716 PDSRKVKWVLDVDPIE 731 ++ ++W +DVDP++ Sbjct: 757 RRTKGIRWSIDVDPVD 772 >UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae RepID=B2IAA9_XYLF2 Length = 733 Score = 785 bits (2029), Expect = 0.0, Method: Composition-based stats. Identities = 312/742 (42%), Positives = 439/742 (59%), Gaps = 22/742 (2%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGMTV---KAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP + VALP+PLP+ FDYL P G+ + GCRVRVPFGK+ E IG+VV + ++E+ Sbjct: 1 MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKR-ELIGVVVEL-PSAEM 58 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + L+ +D P+ + + L W + Y H P+G++L ALP LLR G+P Sbjct: 59 SV-PLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWT 117 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV-ATLEFNDAALQALRKKGLC 174 + + + L+R+ + Q L D + + A L K+G Sbjct: 118 CWAWRLTETGRTAAPKLRRNSRSAQMAELLTASDQTEDALNTRMNRWRAVAHNLTKRGYV 177 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + + + + LNTEQ AV +++ F +LL GVTGSGKTEVY Sbjct: 178 ERIKKPTTVPVIIQTTSNTVP--VLNTEQQKAVETLNANVG-FKTYLLDGVTGSGKTEVY 234 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + LA KQALV+VPEIGLTPQ + F R PV LHS L DSER W A+ Sbjct: 235 LQAIATCLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARC 294 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+GTRSA+FTP N G+I++DEEHD+SYKQQ+G RY+ARD A+ R + +P+IL Sbjct: 295 GEARLVLGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNVPVIL 354 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LE+L N +Y+ LRL+ RAG A VLD++ + ++ GL+P ++T + Sbjct: 355 GSATPSLESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINAT 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD-----HYYTLHQAQHHLRCHHCDSQ 469 L D QV++F NR G++P LLCHDCGW A C +C T++ +L+CHHC ++ Sbjct: 415 LARDEQVLVFKNRCGYSPVLLCHDCGWTATCHQCSTSVHHTPMTVYSGGTYLQCHHCGAR 474 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P+P CP CGST L P G+GTE+LE L FP P+ RIDR+TT + L+ Q ++ Sbjct: 475 QPMPLSCPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKLG 534 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 A IL+GTQ+LAKGHH P +T+V ++ +D LFSADFR+ E+ +Q QVAGRAGRA Sbjct: 535 N-AAGILVGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAK 593 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV LQTHHP+HPLLQTL+ GY FA L +R+ LPP+ ++RAE + Sbjct: 594 HAGEVWLQTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDTTST 653 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 FL +R + + + GP+ A P+R G R+Q+LL R L +N + Sbjct: 654 QQFLTTIRKHM----PTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNVLI 709 Query: 710 ALINTIPDSRKVKWVLDVDPIE 731 I+ +P++R+V+W LDVDP++ Sbjct: 710 PAIHALPEARRVRWSLDVDPVD 731 >UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oenococcus oeni RepID=Q04FR0_OENOB Length = 803 Score = 785 bits (2028), Expect = 0.0, Method: Composition-based stats. Identities = 256/805 (31%), Positives = 413/805 (51%), Gaps = 80/805 (9%) Query: 1 MPVAHVALPVPLPRT---FDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASEL 55 M A V + +P +T F YL+P+ + G RVRVPFGK+ +G VV+V SE Sbjct: 1 MRTASVIVDLPTRQTNQPFTYLIPDDLLDFNLLGHRVRVPFGKRN-LMGYVVAVGQ-SER 58 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHA---------------- 99 +LK + ++D +PV + +L W ++Y V+ Sbjct: 59 SDFQLKKIESIIDEKPVLNSEMLKLSEWLSNYVFSYRVQVIQTILPNAFKPKYLKGLKIV 118 Query: 100 --------------------LP------------ILLRQGRPAANAPM-----------W 116 LP L+RQG+ + Sbjct: 119 DQVPEKIKENIFLNNQEIEFLPKNYTSEQIKVINSLIRQGKIVQTTTIQKKNKGKKVKVL 178 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK----IWRDQVATLEFNDAALQALRKKG 172 + A +LN S Q++ L L + ++ L+ + + + KK Sbjct: 179 SNNLNDNDIATNLNKKSLSDSQKKLLIFLSGHRDGFFQVKELAEILDISKSTILTAEKKS 238 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGK 230 + + + + LN++Q ++ SA + +LL G+TGSGK Sbjct: 239 WLKKSEVRMTRNPVKKIAVTKTNAVELNSDQKKVFNSVESAITKNENKTFLLEGITGSGK 298 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL ++E +AQGK AL++VPEI LTPQ I + RF V +LHSGL+D ERL W Sbjct: 299 TEVYLQLIEKTIAQGKTALLLVPEIALTPQMIRLVKSRFLDSVALLHSGLSDGERLDQWE 358 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + ++G+ IVIGTRSA+F+P N+G+I++DEEH+++YKQ+ RYHARD+A++RA Q Sbjct: 359 EIRDGKIKIVIGTRSAVFSPLTNIGLIIMDEEHETNYKQEGNPRYHARDIALWRAKYHQA 418 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLK----GQKVQAGLAP 405 +LGSATP+LE+ Q+ ++LL + RA A+ ++D++ + +P Sbjct: 419 VTLLGSATPSLESRARAQKGIFKLLTMNHRAVSGAKLPDVSIVDMREVWQKEHADNDFSP 478 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L+ ++ + + Q IL LNRRGF+ ++C +CG++ CP C+ TLH H L+CH+ Sbjct: 479 TLLKKIEERKENHEQTILLLNRRGFSSFVMCRNCGYVPRCPNCNLSLTLHMDSHSLKCHY 538 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + +P++CP CGS + VG GTE++E L L G+ ++R+D+DTT RKG+LE+ L Sbjct: 539 CGYEEAIPKKCPVCGSPQIRYVGTGTEKIETKLNSLVNGIRVARLDQDTTKRKGSLEKIL 598 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + +G +L+GTQM+AKG FPDVTLV +++ D L DFRS E+ QL TQVAGR+ Sbjct: 599 RDFGKGNYDVLLGTQMVAKGLDFPDVTLVGVINADIGLNLPDFRSGEKTFQLLTQVAGRS 658 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GRAGK GEV++QT +P++ ++ + Y+ F + ++ R + P+ + V + + Sbjct: 659 GRAGKTGEVIIQTFNPDNYAIKLAADQNYEGFYKTEMSIRHIADYSPYYYTIQVGIDGPD 718 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 A + ++ I P ++ VLGP P K R+ +QI+L++ ++ + Sbjct: 719 QFPASRAIDEVAEFI--KPKLAKETIVLGPTPKAIAKLRNRYYFQIILKYKKDPNIESTL 776 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 + + + + +D DP+ Sbjct: 777 SELQTVFGE-KLPKDIYLSIDRDPV 800 >UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7K8_9BACT Length = 743 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 263/744 (35%), Positives = 377/744 (50%), Gaps = 22/744 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M +A V + V L + FDYL+PE + +K G VRVPFG R G V+S++D+S+ Sbjct: 1 MAIAKVIIDVSLDKEFDYLIPETLLPQIKVGVMVRVPFG-HSTREGYVLSLADSSDYTGG 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + + ++ + L W ADYY + LP +R G+ Y Sbjct: 60 RLKPITGLCETRANIPEHLVTLGRWMADYYCCSQEQSIRTLLPAAVRSGKIKPRIRRLYR 119 Query: 119 FATEQGQA--VDLNSLKRSPKQQQAL--AALRQGKIWRDQVATL--EFNDAALQALRKKG 172 A V N K S + L A L G D + +L F+ + L L + Sbjct: 120 IADVAAAESFVACNGTKPSAALRVDLVKALLAHGAQPADSLKSLVPAFSQSGLNTLIRNK 179 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA---DTFSAWLLAGVTGSG 229 + + E + ++ + + L + +Q A+ I + LL GVT SG Sbjct: 180 IVETVEEIVRRDVFGDSHVLPSKPLPPSADQKKALELIGKMLLGETSSHVLLLHGVTNSG 239 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVYL + GK A+V+VPEI LTPQT+ RFR RF + VLHS L+D ER W Sbjct: 240 KTEVYLQAIAKAREMGKSAIVLVPEISLTPQTVRRFRARFGDQLSVLHSRLSDGERFDEW 299 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + NGE I +G RSALF PF+NLG+I++DEEH+SSYKQ E RY ARD+AV R E Sbjct: 300 NRINNGEVQIAVGARSALFAPFRNLGLIIVDEEHESSYKQSEAPRYSARDVAVMRGKLEG 359 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-----GQKVQAGLA 404 +ILGSATP+ ET N K+ L R+ + N ++D + + Sbjct: 360 AVVILGSATPSAETSYNASTGKFLLARMAAQVDNKLAPRVTIVDQRLAGPPEPGKSNFFS 419 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 ALIT + ++ Q I+FLNRRG+A ++C +CG+ A CP C YT + + L CH Sbjct: 420 KALITAVFDRMRRGEQSIIFLNRRGYARVMICEECGFEARCPDCSVAYTYSRQRETLTCH 479 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 C P CP C S + G+GTE++E +F I+R+D DT E Sbjct: 480 LCGGVIPAYELCPQCLSPKIRYAGVGTEKIESLAGAVFKPARIARMDSDTMRGADDYEAV 539 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L RG ILIGTQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQVAGR Sbjct: 540 LERFRRGELDILIGTQMIAKGLHFPNVTLVGIVNADLGLSMPDFRAPERTFQLITQVAGR 599 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR +GEV++QTH+PE+ +Q + +D F++ L R+++ PP+T +IV Sbjct: 600 AGRGDIRGEVIIQTHNPENETIQYAAQQDFDGFSKFDLEFRQLLAYPPYTHLIIVHFRGE 659 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + F + E + GP PA + G++R+ ++++ L+ Sbjct: 660 DESMVVEFANGFTAELQR--YGHEGIRFAGPSPAPIERIKGKFRYMLVIRGSRLKLLRQA 717 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 + LAL P + V+ +DVD Sbjct: 718 LR-VLALHRQPP--KGVEVYVDVD 738 >UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-superfamily II helicase n=11 Tax=Clostridiales RepID=C4ZEW0_EUBR3 Length = 753 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 236/754 (31%), Positives = 377/754 (50%), Gaps = 27/754 (3%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A+V + + L +TF Y +P+ + ++ G V +PFG + G V+ V+D E Sbjct: 2 YANVIVDISHEKLDKTFQYSIPDELLCDIRPGVCVDIPFGSR-TITGYVIEVTDKPEYDP 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 K ++ + + L W Y + L +P+ + + + Sbjct: 61 ARTKPLIGIKADSVAVEAKLIALAAWIRRNYGSTMNQALKTVIPVKKQAKEQVSRSIALK 120 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ-----VATLEFNDAALQALRKKG 172 + + L K+ + + AL L + A ++AL + G Sbjct: 121 IDKVKARAQLALCEAKKQKAKARLFRALIDADDGARLEYSFVTGKLSVSAATIRALEQSG 180 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGK 230 ++ +++ + + + +V LN Q + V AI AA + +L+ GVTGSGK Sbjct: 181 FIEVITQS-GYRNPVEHMSVDTYDKVLNAAQQSVVDAIEGDIAAGLRNTYLIKGVTGSGK 239 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ ++ + + G+QA+V++PEI LT QT+ RF RF V +++S L++ ER + Sbjct: 240 TEVYMELIAHCIQSGRQAIVLIPEIALTYQTVMRFFARFGNRVSIINSRLSNGERYDQFE 299 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +AKNG+ I+IG RSALFTPF NLG+I+IDEEH++SYK + RYHAR++A+ A Sbjct: 300 RAKNGDIDIMIGPRSALFTPFSNLGLIIIDEEHENSYKSESVPRYHAREVAIEYARMSDA 359 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 ++LGSATP++++ + YRLL L +R + V+DL+ + + L+ L Sbjct: 360 IVVLGSATPSVDSYYKAKTGVYRLLELDKRVDDRPLPKCEVVDLRQELREGNRSILSTRL 419 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 M + L Q +LFLNRRG + + C CG++ +CP CD + H + CH+C Sbjct: 420 QELMEERLLNGQQTMLFLNRRGKSAFMSCRACGFVVKCPHCDVSLSEHSG-GVMVCHYCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++PVP+ CPSCGS ++ GT+++E +A FP I R+D DTT K A E+ L Sbjct: 479 YRQPVPKVCPSCGSKYISGFKAGTQKIEAMVAKRFPQARILRMDYDTTRAKDAYEKILQA 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 A ILIGTQM+ KGH F +VTLV +L D +L DF +AER L TQ AGRAGR Sbjct: 539 FSNHEADILIGTQMIVKGHDFSNVTLVGVLAADMSLHVNDFHAAERTFALLTQAAGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G VV+QT+ P+H ++T + Y+AF ++ + RR+M PP + ++V + Sbjct: 599 GKLPGNVVIQTYDPDHYAIRTAKEQDYEAFYDKEIEYRRLMNYPPVWNMLLVHVTSPDES 658 Query: 648 HAPLFLQQLRNLIL---------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 QQ+ ++ L SP + ++GP A K +R I ++ Sbjct: 659 ECSSMAQQVYDIALQMISHTDENQSPDDRHLIQLIGPADATIAKVNDIYRKVIYMKTSDY 718 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG 732 L I + + + D +P+ G Sbjct: 719 AALISIKDVIEQAVKADTAMKHANISFDFNPMSG 752 >UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella grylli RepID=A8PKH0_9COXI Length = 684 Score = 784 bits (2025), Expect = 0.0, Method: Composition-based stats. Identities = 323/732 (44%), Positives = 453/732 (61%), Gaps = 66/732 (9%) Query: 3 VAHVALPVPLPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +A+P PL + F+YL P M +K G RV VPFGK+++ IG ++ S++S P N+ Sbjct: 14 ILKIAIPAPLHQYFEYLAPSHFPRMKLKKGLRVLVPFGKRKK-IGFLMETSESSVWPKNK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V+ +LD P+ S+ +L+ W + YYH PIG+V +ALP LR + + Sbjct: 73 LKQVITILDDFPLLPDSLQQLIEWTSRYYHCPIGEVFANALPNALRSEKMS--------- 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 ++ L++ K +D + + +AL Sbjct: 124 -------------------KKLKKFLKENKTHKDT--DTSISSKSRKAL----------- 151 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 LN Q AV I + F +LL GVTGSGKTEVYL V+E Sbjct: 152 ------------------PLNNHQQQAVATIIHSLGQFKTFLLNGVTGSGKTEVYLEVIE 193 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 VL +G+QALV+VPEIGLTPQ +ARF+ F+ P+ + HS L D++RL WL +K G+A+I Sbjct: 194 AVLNRGEQALVLVPEIGLTPQMLARFQTCFSVPLILFHSKLTDTQRLENWLLSKVGKASI 253 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIGTRSALFTP GVI++DEEHDSS+KQQ+G RYHARDLA+ R E IP+ILGSAT Sbjct: 254 VIGTRSALFTPLLRPGVIIVDEEHDSSFKQQKGLRYHARDLALVRGRLENIPVILGSATA 313 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE++ N QK+Y+++ L +RAG AR +DL+ +K+ G + +L+ M++HLQ + Sbjct: 314 SLESIFNAHQKRYQIIHLPQRAGMARQPSFRFIDLRHEKMDHGFSSSLLQTMKKHLQKQS 373 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QV+LFLNRRGF+P + C DCGW A+C RC+ + H+ HL CH+C +RP+ R C C Sbjct: 374 QVLLFLNRRGFSPVIRCQDCGWTADCQRCEQKMSFHKNPAHLLCHYCGYRRPLDRYCLGC 433 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 L+P+G GT++LEQTL FP + I R+DRD T RKG+ + L +H +ILIGT Sbjct: 434 QGQQLLPLGQGTQRLEQTLQKYFPHIGIVRVDRDNTQRKGSFNELLKTIHDNKGQILIGT 493 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QMLAKGHHFP+VTLV +L+ D LFSADFR+ ER QL TQVAGR+GRA K GEV++QTH Sbjct: 494 QMLAKGHHFPNVTLVGILEADSGLFSADFRALERTGQLLTQVAGRSGRADKCGEVLIQTH 553 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 HPEHPL L+ +GY +F+E L ER+ LPP++ ++ AE N + FL +++ Sbjct: 554 HPEHPLFNHLIEQGYFSFSEILLQERQRSLLPPYSYLALIHAEAFNAAYPFNFLNEVK-- 611 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + + +++ VLGPVP+L P+ G +R Q+LLQ SR LQ ++ + ++ + SR Sbjct: 612 -IQAECIKKEVNVLGPVPSLRPRCAGYFRSQLLLQAKSRYVLQRVLAQIIKPVSLLNSSR 670 Query: 720 KVKWVLDVDPIE 731 +V+W LDVDPIE Sbjct: 671 RVRWSLDVDPIE 682 >UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=cellular organisms RepID=Q1GXV2_METFK Length = 738 Score = 783 bits (2023), Expect = 0.0, Method: Composition-based stats. Identities = 322/735 (43%), Positives = 439/735 (59%), Gaps = 15/735 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VPL FDYL V+ G RV VPFG +++ +GIVV ++DAS++ +LK+ Sbjct: 12 ILKVALDVPLDGVFDYL--SEAPVQIGQRVVVPFGPRRQ-VGIVVDLADASDVAPAKLKS 68 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 +++ D EPV + LL + ADYY +P G L ALP LRQ PA + ++ Sbjct: 69 IIQYFDQEPVLDGEFFSLLKFCADYYQYPYGQALLSALPARLRQTEPARARQQFCYWLNS 128 Query: 123 QGQAVDLNSLK-RSPKQQQALAALR-QGKIWRDQVATLEFN-DAALQALRKKGLCDLASE 179 GQA D++++ R Q++ AALR G++ ++A L L ALR++G + E Sbjct: 129 AGQAADISAIPVRQAVQRRIFAALRAHGRLNEAELAELSPGWRKGLAALRERGWIE---E 185 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 ++ + S + LN EQ AV +I DTF WLL G+TGSGKTEVY+ +L+ Sbjct: 186 EQVYAGLGSTLHASSVQPELNEEQVLAVQSILQYRDTFRPWLLHGITGSGKTEVYIRLLQ 245 Query: 240 NVLAQGK-QALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEA 297 VL + QALV+VPEI LTPQ ARFR R P+ LHS L++SERL W A+ G A Sbjct: 246 AVLEGNQDQALVLVPEINLTPQLEARFRTRLPQFPLVTLHSNLSESERLQNWRLAQTGAA 305 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IVIGTR ++FTP L +++DEEHD+SYKQQ+G RYHARD+A+ RA IPI+LGSA Sbjct: 306 RIVIGTRLSVFTPLPGLKFMIVDEEHDTSYKQQDGMRYHARDVALVRAQRRNIPIVLGSA 365 Query: 358 TPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 TPALET N + +Y LL L +RA ++ + +D+ ++Q GL+P L+ ++ L+ Sbjct: 366 TPALETWHNARNGRYGLLTLQQRAVSQSQLPQVNCVDVSRVQMQEGLSPQLLKALKVRLE 425 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q +LF+NRRG+AP LLC+ C WIA C RC +H Q LRCHHC ++ + RQC Sbjct: 426 RGEQSLLFINRRGYAPVLLCNACHWIAPCMRCSSRLVVHLRQGFLRCHHCGHEQNIVRQC 485 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 PSCG+ L P G GT++LE+TL L P + R+DRD+T RK AL + L+ VH G IL Sbjct: 486 PSCGNADLHPTGNGTQRLEETLTRLLPEARVLRVDRDSTRRKHALSEMLSAVHVGEVDIL 545 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH FP++TLV +LD D ALFS DFR+AER QVAGRAGRA K GEV++ Sbjct: 546 VGTQMLAKGHDFPNLTLVGVLDTDSALFSPDFRAAERLFAQLMQVAGRAGRADKPGEVLI 605 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT PEH L L + + A+A L ER + Q PP +++AE + FLQ Sbjct: 606 QTSFPEHQLFNALRVQDFAAYAASLLQEREVAQFPPCEFLALIKAEANEYGPVQRFLQFA 665 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + S+ V PV + G R Q+L Q +R LQ ++ + P Sbjct: 666 AD---SARALGTDALVYDPVRPQMERLKGMERGQLLFQAATRQTLQIVLRQLTPQLRAHP 722 Query: 717 DSRKVKWVLDVDPIE 731 S K++W +DVDP E Sbjct: 723 LSNKIRWAVDVDPQE 737 >UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XL83_CALS8 Length = 723 Score = 782 bits (2021), Expect = 0.0, Method: Composition-based stats. Identities = 242/744 (32%), Positives = 386/744 (51%), Gaps = 36/744 (4%) Query: 1 MPVAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASE 54 M + V + + RTFDYL+P + V+ G RV V FG + G++++V + + Sbjct: 1 MMIVEVCINYQDANVDRTFDYLVPGHLEELVEVGKRVYVNFGVSNRVVEGLIINVKEDTN 60 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP--AAN 112 + +LK V+ V+D P+ + +L +YY +G L +P + Sbjct: 61 VEREKLKCVLAVIDKIPIVSDEQIKLAFSIKNYYATKLGQALGLIIPPFVSNNEIYIICA 120 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 ++ + + LKR + N+ + +L +G Sbjct: 121 QQTSDLTLEDELKEIYNRILKR---------------PVSANSKLAKENEDKIASLFLRG 165 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGK 230 L + + + + + +L +Q A+ I S D + LL GVTGSGK Sbjct: 166 LLRFELKLLKSLNEEKRETPTEPQYKLTKDQKKALELITSTFDKGIYKNILLFGVTGSGK 225 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ + V+++GK ++MVPEI LTPQ I + R + V V HS +N S+R AWL Sbjct: 226 TEVYIQAMRYVISKGKSVILMVPEISLTPQMIQNVKRRIESEVVVYHSKMNSSQRQRAWL 285 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 K K+GEA +VIG RSA+F P K LG+I++DEEH++SYK ++ R +A ++A RA I Sbjct: 286 KLKSGEAKVVIGPRSAIFAPAKELGLIIVDEEHETSYKSEKSPRVNAVEVAQMRAKINSI 345 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 PI+LGSATP +E KY + L R A P + V+D+K + + + L Sbjct: 346 PIVLGSATPTVEHYYYAIAGKYAICTLRERINKALPEV-FVVDMKKEILDGNKSIFSRLL 404 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 ++ + ++LQ QV+LFLNRRG++P ++C +CG++ C C T H+ +LRCH+C+ Sbjct: 405 LSEIEKNLQRGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-DGYLRCHYCN 463 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++ CP CGS ++ G GT+++E + F + R+D+DTT+RK A+E+ L++ Sbjct: 464 YKQEYTSICPKCGSKYVRQYGSGTQRIEDEIKTYFKDARVLRMDKDTTTRKDAVEEILSK 523 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 A IL+GTQM+AKG HFPD+TLV +++ D L DFRS ER QL TQVAGRAGR Sbjct: 524 FKSKEADILVGTQMVAKGLHFPDLTLVGVINADTILNMPDFRSKERTFQLITQVAGRAGR 583 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 KQG VV+QT +P+ + Y++F E+ + R+ M PP++ V N Sbjct: 584 -EKQGRVVIQTFNPDDYSIVAASNHDYESFFEEEIKIRKTMGYPPYSYIVNFIVVSQNEG 642 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A ++ + L+ L + GP + K ++R+ IL++ ++ I N Sbjct: 643 FAKKGIENVYRLL-EKCTKIVNLKIYGPSESPIFKVENQYRYHILVKFEKASQMIDIAN- 700 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 +I + + ++DV+PI Sbjct: 701 ---MIKERYNYNNAELIIDVNPIN 721 >UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR35_ANATD Length = 724 Score = 781 bits (2017), Expect = 0.0, Method: Composition-based stats. Identities = 232/741 (31%), Positives = 385/741 (51%), Gaps = 32/741 (4%) Query: 3 VAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASELP 56 +A V + + + FDYL+P + ++ G RV V FG + G+VV + +++ Sbjct: 2 IAQVCINYQDANVDKVFDYLVPTHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDIE 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 N++K V+ V+D + + L +YY +G+ L +P + + Sbjct: 62 ENKIKCVLAVIDKFSIVSKEQIELAFSMKNYYALNLGEALSLVIPPFV----SSKQIYNI 117 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 E+ + +D + ++ ++ + + + E + ++ + GL + Sbjct: 118 CAKKCEENKNLDDDL-------KELYESILKKPVSINSKLVKENKEKIVKLFLE-GLLEF 169 Query: 177 ASETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEV 233 + + + N L EQ A+ I SA D + LL GVTGSGKTEV Sbjct: 170 DLKNFDTRENTEKNLPRVEPEFNLTEEQNKALNNIISAFDEGGYRNILLFGVTGSGKTEV 229 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ ++ V+ +GK + MVPEI LTPQ I + R V V HS + +RL++WL A+ Sbjct: 230 YIRAIQYVIEKGKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSIDRLNSWLAAR 289 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 N EA +VIG RSA+F P KNLG+I++DEEH+ SYK ++ R +A ++A RA IPII Sbjct: 290 NKEAVVVIGPRSAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPII 349 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP++E ++ KY L L R P + ++D+K + ++ + L++ Sbjct: 350 LGSATPSIEHYYYAKKGKYSLCTLKNRINKTLPEV-LIVDMKKEILEGNKSIFSRLLLSE 408 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + +L+ QV+LFLNRRG++P ++C +CG++ C C T H+ + +L+CH+C + Sbjct: 409 IENNLKKGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-EGYLKCHYCGYKE 467 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 C C S ++ G GT+++E+ + F + R+D DTTS+K A EQ + + Sbjct: 468 EYKGVCTKCNSRYVRQYGSGTQKIEEEIKAYFKDARVLRMDSDTTSKKDATEQIVKKFRE 527 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 A IL+GTQM+AKG HFPD+TLV ++D D L DFRS ER QL TQVAGR+GR K Sbjct: 528 KEADILVGTQMIAKGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGR-EK 586 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G+V++QT +PE + Y++F Q + R+MM PP++ V A Sbjct: 587 PGKVIIQTFNPEDYSIVFASKHDYESFYAQEMKLRKMMVYPPYSYVVNFVTVAREENMAK 646 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 ++ + L+ + + ++ + + GP K ++R+ IL++ ++ I N Sbjct: 647 RGIEHVYALLKENEMEND-MKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIAN---- 701 Query: 711 LINTIPDSRKVKWVLDVDPIE 731 LI + ++DV+P++ Sbjct: 702 LIKERYNYSNASLIIDVNPLD 722 >UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=106 Tax=Firmicutes RepID=A4VTF2_STRSY Length = 812 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 264/797 (33%), Positives = 400/797 (50%), Gaps = 72/797 (9%) Query: 3 VAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDAS-EL 55 +A + + VPL + + Y +P + +K G RV VPFGK I GIVV + D E Sbjct: 18 LAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDEN 77 Query: 56 PLNELKAVVE------VLDSE-------------------------PVFTHSVWRLLL-- 82 L +LK + E VL+ E + + +L+ Sbjct: 78 SLQDLKELAEVLDYSPVLNQEQFWLADQMRKSVFSYKITLLKSMLPSLLNSTYDKLIRPG 137 Query: 83 ------------------WAADYYHHPIGDVLFHA-----LPILLRQGRPAANAPMWYWF 119 +D G ++ A L + + + WY Sbjct: 138 IGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGKILVDYVAKDKKQIKTEKWYRV 197 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 E+ + D+++ + +Q + L Q + +++ L+ ++KG ++ E Sbjct: 198 CLEKLREADISNRAKKRQQLREFL-LEQSEDQLLSNLKSDYSADTLRYFQEKGYIEVWEE 256 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGSGKTEVYLSVL 238 + + + L LN EQA AV I ++ +LL GVTGSGKTEVYL V+ Sbjct: 257 EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVI 316 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 + VL GK A+++VPEI LTPQ RF RF V +LHSGL+D E+ W K + G A Sbjct: 317 DRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQ 376 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 +V+G RSA+F P NLGVI+IDEEH+++YKQ RYHARD+A RA + ++LGSAT Sbjct: 377 VVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHARDVAKLRADYNRATLVLGSAT 436 Query: 359 PALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLK---GQKVQAGLAPALITRMRQH 414 P+LET + Y L L +RA AR V+D + GQ+ + P LI ++R+ Sbjct: 437 PSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIEKIREK 496 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L QV+L LNRRG++ ++C DCG + +CP CD TLH + CH+C Q+ +P+ Sbjct: 497 LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQ 556 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP+C S + G GT++ L L P I R+D DTT +KGA E L RG A Sbjct: 557 TCPNCQSRSIRYYGTGTQKAYDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEAD 616 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQM+AKG FP+VTLV +L+ D AL DFRS+ER QL TQVAGRAGRA K+GEV Sbjct: 617 ILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGRADKEGEV 676 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT++P H + + Y+ F + R+ + PP+ V + + + Sbjct: 677 LIQTYNPNHYAIAFAKEQDYEGFYRYEMDIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY 736 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + + + +LGP P + + +QI+L++ RL+ ++N L Sbjct: 737 ETVAFLRQHLT--DAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQE 794 Query: 715 IPDSRKVKWVLDVDPIE 731 +++ ++ ++D +P Sbjct: 795 -RENQDLRLIIDNEPQN 810 >UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E458 Length = 772 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 323/760 (42%), Positives = 444/760 (58%), Gaps = 37/760 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD-------AS 53 M + +A+PVPL +TF+Y V+ G RV+V F + +G+VV + Sbjct: 19 MAILAIAVPVPLRKTFNYT--YAQPVELGVRVQVSFANR-PLVGVVVGCVNSIDEIPLEQ 75 Query: 54 ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 + N+ K + VLD P+ + S LL W A YY HP+G+V+ ALP LR+ + + Sbjct: 76 QGDPNKYKPIDAVLDDTPMLSQSWLSLLHWLASYYQHPLGEVVQTALPNALRKPQSSQPT 135 Query: 114 PMWYWFATEQGQAVDLNS-----------LKRSPKQQQALAALRQGKIWRDQVATL---- 158 + + QA+++ LKR+PKQ ALA K V +L Sbjct: 136 LINVLALSPTLQAINVPGNDITQTVPFIHLKRAPKQ-FALACFVAAKTQSGTVDSLTKDE 194 Query: 159 ---EFNDAALQALRKKGLCDLASETPEFSDW----RTNYAVSGERLRLNTEQATAVGAIH 211 F+ A + AL KK + + W + L N EQ+ A+ I Sbjct: 195 VKQHFSSALINALIKKEILIESQHQLTSGCWFDRVGAEHFAHIAELPANVEQSVAISGIS 254 Query: 212 SAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA 271 + + FS +L+ G+TGSGKTEVYL V+ VL Q +Q L++VPEIGLTPQT++RF RF Sbjct: 255 AQLNQFSCFLIEGITGSGKTEVYLQVINKVLQQRQQVLILVPEIGLTPQTVSRFESRFGI 314 Query: 272 PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE 331 V VLHSGL D+ERL W +A+ + IVIGTRSA+FTP LG+I+IDEEHD S+KQQ+ Sbjct: 315 TVGVLHSGLTDTERLVVWQQARLNQIGIVIGTRSAIFTPLPELGMIIIDEEHDDSFKQQD 374 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 G RYHARDLA+ A + IPI+LG+ATP LE+L K++ +L +RAGNA A H+ Sbjct: 375 GLRYHARDLAIMLAQKQGIPIVLGTATPVLESLHRALTGKFQHFKLEQRAGNATVAPVHL 434 Query: 392 LDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 +D+ Q + GLAPA + M+ HL NQV+LF+NRRGFAPA++C CG + +C CD Sbjct: 435 IDICQQPLHYGLAPATLDVMQSHLSQGNQVLLFINRRGFAPAVVCSSCGHVEDCHACDKP 494 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T H+ Q + CH C +Q P C CG++ L+ G+GTEQLEQ L LFP RID Sbjct: 495 MTYHKTQSRMVCHQCLAQASAPHHCSVCGASELITQGIGTEQLEQGLNELFPQYSTIRID 554 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 D+ K L Q + V++ +IL+GTQ+LAKGHHF VT V ++DVDGALFSADFR+ Sbjct: 555 SDSMRGKHTLSQTIEAVNQRKHQILLGTQILAKGHHFAHVTCVVIMDVDGALFSADFRAP 614 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 E+ AQL TQ++GRAGRA K GE LQT P HPLLQ L+ GY FA AL ER LP Sbjct: 615 EKLAQLITQISGRAGRADKPGETFLQTTQPGHPLLQDLVNNGYGHFARFALHEREQAALP 674 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P+T VI+RAED + Q A LQ R+L+ + + + +GPVP L K+ R R+ + Sbjct: 675 PFTYQVILRAEDESPQRATQLLQFARHLLTNM----QNISTIGPVPCLIEKKQTRHRYML 730 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++Q P R Q +++ + + +V+W +DVD I+ Sbjct: 731 IIQSPYRNLRQKVLDTIIDDYAKYANKLRVRWSIDVDNID 770 >UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae RepID=D2R7W4_9PLAN Length = 769 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 268/749 (35%), Positives = 382/749 (51%), Gaps = 27/749 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VA V P FDYL+PE + +K G RV+VP G +E +G SV+ L Sbjct: 26 VAEVVFRDPPFGPFDYLIPEPLAPRLKPGARVQVPLGASREVVGYCTSVTSKPA-SGRPL 84 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+ V+D P+ + L W +DYY P G VL +P +R A + Sbjct: 85 KAIAAVIDDVPLVERKMLELTRWMSDYYLCPWGQVLHGVVPAGVRGN--AGTRETTFLSL 142 Query: 121 TEQGQAVDLNSLKRS--------PKQQQALAALRQGKIWRDQVATLEF---NDAALQALR 169 + +G+ + + + RS P + L L V EF + A + LR Sbjct: 143 SAEGRQILASGVDRSGEKPKKVLPAHLEILRILGTSPRELTPVELGEFASCSIAQITGLR 202 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTG 227 KK S E L L+ Q+ A+ AI+ A D T + LL GVTG Sbjct: 203 KKKWIASDVRRVRSSSHEELPLARTEPLALHPAQSHALAAINRAIDRRTSATILLHGVTG 262 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVY+ +E V++ G+QA+V+VPEI LTPQT RFR RF+ V VLHS L+D+ER Sbjct: 263 SGKTEVYIQAIERVISFGQQAIVLVPEISLTPQTRQRFRSRFD-RVAVLHSHLSDAERHY 321 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + GE +++G RSA+F P +LG+IVIDEEHD S+KQ E RYHARD+A +RA Sbjct: 322 HWEQIARGEVQVIVGARSAVFAPAPHLGLIVIDEEHDGSFKQSEAPRYHARDVAEHRALQ 381 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGL 403 IP++LG+ATP+LE+ + KY L+ + R +DL+ + + + Sbjct: 382 LGIPLVLGTATPSLESYYRARSGKYELVPMPDRVEGRELPHVGTIDLRVEFQSRSSRGSI 441 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 L T + Q + QVIL LNRRG++ + C CG++A+C CD T H+ + L C Sbjct: 442 GRQLHTAIAQAIAEKGQVILLLNRRGYSTHVQCPACGFVAKCEHCDLALTHHREEQLLVC 501 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HHCD P +CP C + GLGTE+LE + FP + R+D DT + G+ E Sbjct: 502 HHCDFTTKPPERCPDCTFDGIRYSGLGTEKLEAEIKARFPAAKVLRMDSDTMQKPGSHEA 561 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 LA+ G +IL+GTQM+AKG FP+VTLV +++ D AL DFR+AER QL TQVAG Sbjct: 562 ALAKFRSGEVQILLGTQMIAKGLDFPNVTLVGVINADTALHLPDFRAAERTFQLVTQVAG 621 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 R GR G V++QT P+HP ++ + Y F + L +R PP+T+ + + Sbjct: 622 RTGRGELGGRVLVQTFSPDHPAIEAAVDHDYAKFVGRELPDRVAHGFPPFTTLLRLIVRG 681 Query: 644 HNNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 + F A + + +LGP P + G++R+ L L+ Sbjct: 682 DSESKTREFATMAAESWKKLLEAKQCEHRILGPAPCAVARLRGKFRFHALATSVDSDTLR 741 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPIE 731 + T V+WV+DVD I+ Sbjct: 742 ATFREASSTWKT---PDDVQWVIDVDAID 767 >UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44 Tax=Bacilli RepID=Q38XT7_LACSS Length = 805 Score = 775 bits (2002), Expect = 0.0, Method: Composition-based stats. Identities = 260/807 (32%), Positives = 400/807 (49%), Gaps = 80/807 (9%) Query: 1 MP-VAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDAS 53 MP +A V + VP R +DY +P + ++ G RV +PFG +I G V+ V D Sbjct: 1 MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQL 60 Query: 54 ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR----- 108 +LKA+ V+D P + L W A + L LP ++R Sbjct: 61 SF-TGQLKAIEAVVDLTPAVNPELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTAT 119 Query: 109 -----PAANAPMWYWFATEQGQAVDLNSLKRSP----------------------KQQQA 141 P + E +L K KQ A Sbjct: 120 LTDEIPTDLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQGKISVTYHVDNRAQVKQLTA 179 Query: 142 LAALRQGKIWRDQVATLEFND-------AALQALRK-------KGLCDLAS--------- 178 + + + L + + LQ L K + + + Sbjct: 180 IEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIG 239 Query: 179 ---------ETPEFSDWRTNYAVSGERLRLNTEQATAVGAI--HSAADTFSAWLLAGVTG 227 + + + N ++ L +EQ TAV A+ ++ D +L+ GVTG Sbjct: 240 AEKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTG 299 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVYL ++ VL QGK AL++VPEI LTPQ + R + RF V VLHSGL++ E+ Sbjct: 300 SGKTEVYLQTIDAVLQQGKTALMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYD 359 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + + EA +V+G RSA+F P +++GVI++DEEH++SYKQ E RYHARD+A++R+ Sbjct: 360 EWRRIERKEARVVVGARSAVFAPLEDIGVIIMDEEHEASYKQDESPRYHARDVAIWRSQY 419 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG---QKVQAGLA 404 P+ILGSATP+LE+ Q+ Y L+RLT+R ++D++ + + + Sbjct: 420 HNCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFS 479 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 PAL+ +++ +Q Q +L LNRRGF+ ++C DCG++ +CP CD TLH H ++CH Sbjct: 480 PALLAGIKERMQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCH 539 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +C + +P+ CPSC S + G GT+++E L L P I R+D DTT +KGA + Sbjct: 540 YCGHEEAIPKICPSCQSRQIRYFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKL 599 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L + A IL+GTQM+AKG FPDVTLV +++ D AL DFR++ER QL TQV+GR Sbjct: 600 LKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGLPDFRASERTFQLLTQVSGR 659 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGRA K G+V++Q+++ E+ +Q Y+ F + +A R PP+ V V Sbjct: 660 AGRADKVGQVIVQSYNSENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHP 719 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 A Q+ + P+ ++ +LGP P + R+ +QI++++ +LQ Sbjct: 720 EEALAAKKSFQIAKQM--RPILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAK 777 Query: 705 INGTLALINTIPDSRKVKWVLDVDPIE 731 + L I K LD +P++ Sbjct: 778 LAEILETTQ-IDTRHGFKIGLDNEPLQ 803 >UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia RepID=B4D7U4_9BACT Length = 741 Score = 775 bits (2001), Expect = 0.0, Method: Composition-based stats. Identities = 267/744 (35%), Positives = 393/744 (52%), Gaps = 24/744 (3%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP A V + + FDY LPE + ++ G RVRVP + + + V+ + + +++P Sbjct: 1 MPRYARVLVDDSAGKAFDYELPEAVAAVLQPGARVRVPV-RTRTALATVIELLEETDVPG 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +L + EV+ +EP+ + + +L W +DYY + + LP ++R+ ++ Sbjct: 60 VKL--ISEVVSAEPILSPLLLKLGAWISDYYCCSLEAAMKAVLPNVIRKAEVGHQTRLFA 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIW---RDQVATLEFNDAALQALRKKGLC 174 A E + K++P Q + L + + + + A +QAL KKGL Sbjct: 118 RLAREVEEEELEKLRKKAPLQAGVIDHLTEAAQPVSVTELAEKCDASHAVVQALVKKGLI 177 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD-----TFSAWLLAGVTGSG 229 + E + V L +N EQ + A D LL GVTGSG Sbjct: 178 VTEAARVERDPFGDESFVHAAPLAMNPEQTAVFEHVRRAIDHPPDAAPKPLLLHGVTGSG 237 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA---PVEVLHSGLNDSERL 286 KTE+YL ++ VL +G+ A+++VPEI LTPQT+ RF+ RF A V VLHS L++ ER Sbjct: 238 KTEIYLQAIQLVLERGQTAIMLVPEISLTPQTVERFKSRFAATRHEVAVLHSHLSEGERH 297 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W K ++G A IVIG RSA+F P NLG+IV+DEEH+++YKQ+E RYH RD+AV RA Sbjct: 298 DEWHKIRDGRARIVIGARSAIFAPCANLGLIVVDEEHENTYKQEETPRYHGRDIAVLRAS 357 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LA 404 E+ I+LGSATP+LE+ N Q KY LLRL R + + ++DL+ + + G L+ Sbjct: 358 MEKCAILLGSATPSLESFHNAQTGKYELLRLIARVDDKKMPFIRIIDLRMESKKHGAILS 417 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 LIT + L Q ILFLNRRGF+ +L+C CG + ECP C T H+A + CH Sbjct: 418 ERLITAINDRLTKKEQTILFLNRRGFSTSLICEKCGHVCECPNCSVALTFHRAAARMVCH 477 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 C Q P++CP C + G GTE++E +++ LFP I R+D D R+ A + Sbjct: 478 ICGYQAVAPQKCPECRDPGIKYTGTGTEKVEDSVSRLFPKAVIKRLDADVMQRREAFRET 537 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L G IL+GTQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQVAGR Sbjct: 538 LTAFRTGKIDILVGTQMIAKGLHFPNVTLVGIINADLGLHLPDFRAGERTFQLLTQVAGR 597 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR +GEV +Q+ P P +Q + +D F EQ + RR PP+T V++ Sbjct: 598 AGRGDVEGEVFVQSFTPFSPSIQHARHHDFDGFWEQEIEFRRQWDYPPFTHLVLIIVRSA 657 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + Q + L + + + P PA K G +R+ ++++ S VRL Sbjct: 658 HQQRGSFSAETLHRRLKEELPP--GVTLSEPAPAPLEKSHGSYRFHLMMRTRSIVRLSRH 715 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 + L + V +DVD Sbjct: 716 LRAVLD---KLTFPEDVFVTVDVD 736 >UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIP9_9FIRM Length = 792 Score = 773 bits (1997), Expect = 0.0, Method: Composition-based stats. Identities = 256/792 (32%), Positives = 376/792 (47%), Gaps = 72/792 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSV-SDASELPLN 58 A + + + L R F Y +P M V+ G RV VPFG Q+ G + + +D+S + Sbjct: 4 FAEIIVSIRHNRLDRPFTYRVPSTMDVRVGSRVVVPFGPQR-LEGFCIGLNTDSSLSETD 62 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP--------A 110 +K + EVLD P+ T + L W A + D L +P +R + Sbjct: 63 GIKEIEEVLDEAPLLTEELVDLSAWGAARWLCNRVDFLQAMVPGGVRWTQRKWVEFTGEV 122 Query: 111 ANAPMWYWFATEQGQAVDLNSLKRSP---------------------------------- 136 + + G LK P Sbjct: 123 EPESPSLCYLRDNGPVKMAAWLKSFPEMDRPGELRRLQQDGIIKLSRRETRGIGKKKILT 182 Query: 137 --------------KQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 KQ A+ L++G ++ + A +++L K+G+ + Sbjct: 183 AYLINEADQSKLGNKQALAVGILKKGPCALTELEKQGVSRATVRSLEKRGIIKTEETSLR 242 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVLEN 240 + + L Q A+ I A + LL GVTGSGKTEVYL + + Sbjct: 243 RDPLAGEQFIPQQSLSATVAQGEALQQIGDALAGNKPRTVLLHGVTGSGKTEVYLQAIAD 302 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 A G+ ++V+VPEI LTPQ I RF RF V VLHS L+ ER W + GEA + Sbjct: 303 TAAAGRGSIVLVPEIALTPQMIERFAARFGERVAVLHSKLSAGERYDEWCRIAAGEAWVA 362 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSA+F PF+NLG+I++DEEH+S+YKQ E RYHARD+A++RA + ++LGSATPA Sbjct: 363 IGARSAIFAPFRNLGLIILDEEHESTYKQDEAPRYHARDIALWRAGNHDAAVVLGSATPA 422 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQA 417 LE+ + YRL L R N ++D++ + + L+ + + Sbjct: 423 LESSLQARLGNYRLCPLQERIANRPMPPVEIVDMRQELKDGHRSIFSRPLLAALEKVFAE 482 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 + Q IL LNRRG+A +LC +CG + C C+ H A+ LRCH+C+ Q P P CP Sbjct: 483 EKQAILLLNRRGYATFVLCRECGHVMRCTGCNVALKFHMAEEMLRCHYCEHQEPYPLTCP 542 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C ++ G GT+++E+ L FP V ++R+D DTT+RKGA ++ L A +LI Sbjct: 543 KCSGRYIKHFGTGTQKVEEELRKHFPHVRVARLDADTTTRKGAHQKILNTFKNKEAHVLI 602 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG FPDVTLV ++ D A+ DFR+ ER QL TQVAGRAGR G VV+Q Sbjct: 603 GTQMVAKGLDFPDVTLVGVITADTAINLPDFRAGERTFQLLTQVAGRAGRGSAGGNVVVQ 662 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T+ PEH + Y+AF + RR + PP+T V + + + Sbjct: 663 TYTPEHYAILAAKTHDYEAFYAEESVARRELGYPPFTRMVRLLLSGEDEARVIDAASFMV 722 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 +L + +LGP P K G++RWQ++++H L + P Sbjct: 723 SLF------EGDADILGPSPCPIEKVRGQFRWQVVVRHCELEPLLAAVEDAAEKFRCSPP 776 Query: 718 SRKVKWVLDVDP 729 + V+ +DVDP Sbjct: 777 ATAVRLSVDVDP 788 >UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBV0_PARUW Length = 745 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 254/744 (34%), Positives = 390/744 (52%), Gaps = 25/744 (3%) Query: 2 PVAHVALPVPLPRTFDY-LLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 +A V L + + +T DY ++P + + G RV VP + R G +V + S Sbjct: 6 AIASVILDISIDKTLDYGIVPSQLEAAQKGSRVEVPV-RGHSRTGYIVEIKSDSNF--KN 62 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW- 118 +K + +L P+ +++L LW A YY P+ D+ LP +R+G Sbjct: 63 IKPITRLLSETPLVPEELFKLALWVAKYYCAPLRDIFRIILPPSVRKGMKEKEQLFVVRG 122 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQ---GKIWRDQVATLEFNDAALQALRKKGLCD 175 + E + V ++ ++ P Q L + Q G + + + + +++ +L K+ L Sbjct: 123 KSKEILRQVCVDIREKKPAQASVLEVMLQVKNGILLSKLLEESKSSRSSVLSLAKQQLLI 182 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEV 233 + + + S + LN +QA A+ I ++ + F L+ G+TGSGKTE+ Sbjct: 183 VETIKIDRSPLVDEDYFMTKPKILNEDQAVALNKIDASLNAKIFQTHLIHGITGSGKTEI 242 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL +E L K +++VPEI LT QTI RFR RF + +LH L++ ER W K + Sbjct: 243 YLQAIEKALKLEKGTIMLVPEISLTAQTIQRFRSRFAEKIAILHHRLSEGERRDEWHKIR 302 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPI 352 G A I++G RSA+F+P NLG+I++DEEH+ SYKQ E Y ARD+AV R Q + Sbjct: 303 EGRAKIIVGARSAIFSPVVNLGLIIVDEEHEQSYKQNEMSPCYQARDVAVMRGKLAQATV 362 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA----GLAPALI 408 +LGSATP+LE+ N KY L L +RA A ++D++ + +A + L+ Sbjct: 363 VLGSATPSLESYYNALNGKYALSVLHKRADVATLPDVTIVDMRKEFERAKTLTSFSEVLL 422 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + + + QVILFLNRRG+ LLC DC I +C C+ T H +HL CH C Sbjct: 423 SGIERRQKQGEQVILFLNRRGYHTTLLCQDCSHIVKCTHCEIPLTFHLGDNHLSCHLCGY 482 Query: 469 Q-RPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 Q P P++CPSC G+ HL G GTE +E+ L +FP + RID DTT KG+ ++ L Sbjct: 483 QISPPPKECPSCRGTKHLKFRGAGTEHVEKALHAIFPQIRTMRIDADTTKHKGSHQKLLR 542 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + G A +LIGTQM+AKG HFP+VTLV +L+ D L DFR++E QL TQVAGR+G Sbjct: 543 DFGTGKADVLIGTQMIAKGLHFPEVTLVGVLNSDAGLNIPDFRASETIFQLITQVAGRSG 602 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R +GEV++QT PE+ +Q + Y F E+ +A R M PP++ + Sbjct: 603 RGVTKGEVIIQTSMPENSTIQHAAKQDYAGFYEEEIAVREMFHYPPFSHLAKLTFSGKQP 662 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQHII 705 Q+ R L++ + PV P K +R+Q LL+ PS + L ++ Sbjct: 663 DQTYEIAQKFRELLIFQLPQHYEFN---PVIPCGYAKIKDLYRYQFLLRGPSMIPLNLVL 719 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L+ +++K +D++P Sbjct: 720 EN---LMQKFSIPKEIKLFVDINP 740 >UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria RepID=C4K9E5_THASP Length = 724 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 289/733 (39%), Positives = 404/733 (55%), Gaps = 12/733 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VALP+PLP+ FDY + G V+VPFG+ ER G++V + + + L + Sbjct: 1 MAIVRVALPIPLPQAFDYTAADAGVGDVGRCVKVPFGRG-ERTGLIVGIGGEAGVELARI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF- 119 K V+ + P L+ + A YYH P+G+V+ ALP LR+ ++ Sbjct: 60 KPVLHIQRGVPALPADWLELVSFVARYYHAPLGEVVALALPPGLRRADGVSDEDEDPLLG 119 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 +G + + S A + WR V A+ L ++G ++ Sbjct: 120 VAPKGGEALCAARRASRALALLQALAAEPGPWRRSVIRAREGGEAVGELLRRGWLEIV-- 177 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +D + + L EQA AV AI A F WLL GVTGSGKTEVYL + Sbjct: 178 ----ADPGARHEAGAQPLA-TPEQAAAVDAIVGAGMRFRPWLLHGVTGSGKTEVYLRLAA 232 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEAA 298 + LAQG+Q L++VPEI LTPQ R +RF A V LHS L D R +++A +G A Sbjct: 233 HALAQGRQVLMLVPEIALTPQLEQRVAQRFAAANVVSLHSALADGARSRGFVQALSGRAD 292 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+GTR A+F P LG+I++DEEHD+SYKQQEG RY ARD+AV+R +P++LGSAT Sbjct: 293 IVLGTRLAVFAPLPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRGRQRDVPVVLGSAT 352 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P+LE+ + + ++Y L RL+RRA A +D + K+ GL+PAL + Q L+ Sbjct: 353 PSLESWFHARSERYALQRLSRRAVAATLPAVRCIDTRRTKLDEGLSPALHVAITQRLERG 412 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ++FLNRRG+AP L C CGW++ CP C +H A LRCHHC P+P CPS Sbjct: 413 EQSLVFLNRRGYAPVLSCPSCGWVSRCPHCSANLVVHLADRRLRCHHCGCDGPIPHACPS 472 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG + P G GT+++E LA LFP + R+DRD + E L + G A IL+G Sbjct: 473 CGDQDIQPFGRGTQRIEARLAELFPQARVLRVDRDAARTRSQWETLLDTIAAGEADILVG 532 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGR GEV++QT Sbjct: 533 TQMMAKGHDFPKLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRGALPGEVLIQT 592 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 +P HPL L +DAFA AL ERR PP+T ++RA+ + A FL+ R Sbjct: 593 EYPMHPLYLHLAKHDFDAFARMALQERRAAGFPPFTHQAMLRADAPALEDAVEFLRHARR 652 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 L A L + PVP + R R Q+L++ R LQ + +A++ + Sbjct: 653 LAEERAPA--GLRLYDPVPMRMTRLARRERAQLLVEADHRGPLQAFLAEWVAVLYRQRTA 710 Query: 719 RKVKWVLDVDPIE 731 R+++W LDVDP+E Sbjct: 711 RELRWQLDVDPLE 723 >UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium hafniense RepID=B8FS82_DESHD Length = 775 Score = 772 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 239/776 (30%), Positives = 379/776 (48%), Gaps = 49/776 (6%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SEL 55 M A V + V L + F Y +PEG+++K G RV VP +Q + G+VV +++ E+ Sbjct: 1 MHYAEVLVDVANRRLDQVFHYQIPEGLSLKRGMRVLVPLQYRQVQ-GVVVRITEQLPQEI 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + LK ++ ++D+ V + L LW A+ I L P+L +G+ Sbjct: 60 AHSALKPILGIVDTMYVVPEDLVDLALWLAETTICSIAQSLHTVWPLL--KGKVEEYVIP 117 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 E +A+ + + + + + + ++ L K+G Sbjct: 118 MASQEDEDVKALKILDSETYQALAVIFRSRNKTLPLSTYLKRSGLSKTQVEHLAKQGWLK 177 Query: 176 LASETPEFSDWRTNYAVSGERL--------------------------------RLNTEQ 203 L S + A++ E L EQ Sbjct: 178 LESRFTSGVPRKVQAALTPEERVGDDLGDRESMTGMMHEADIELNVHQGPDYLRTLTPEQ 237 Query: 204 ATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 + A D ++ LL GVTGSGKTEVY ++ VL +G A+++VPEI LT Q Sbjct: 238 GKVCEKVTQALDKQSYETLLLHGVTGSGKTEVYQRLIGEVLVKGGSAILLVPEISLTSQI 297 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 F+++F + VLHSGL E+ AW G+ IV+G RSA+F P +L +I++DE Sbjct: 298 ARYFQDQFGEQLIVLHSGLQVGEKAKAWQDILQGKIRIVVGARSAVFAPLPDLRLIILDE 357 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA 381 EH+S+Y Q+E +YHAR++A R + ++LGSATP+LE Q K LL + R Sbjct: 358 EHESAYHQEENPKYHARNVARKRMEQLRGVVLLGSATPSLEAYAAAQTGKVPLLTMEERV 417 Query: 382 GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHD 438 V+D++ + ++ + +L ++++ L+ Q +LFLNRRG++ ++C + Sbjct: 418 NRRPLPPVEVVDMREELIKGNRSMFSLSLQDKLKRTLERGEQSMLFLNRRGYSTFVVCRE 477 Query: 439 CGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTL 498 CG++ C CD T H H +RCH+C+ + PR CP CGS ++ G GT+++E + Sbjct: 478 CGYVIRCHDCDIALTYHTQGHTMRCHYCNHEEVPPRTCPECGSRYIRFFGQGTQRVEDEI 537 Query: 499 APLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 L+P I R+D DTT K A E L + R A IL+GTQM+AKG FP+VTLV ++ Sbjct: 538 KGLYPAARILRLDFDTTRSKDAYEDILGKFRRQEADILVGTQMMAKGLDFPNVTLVGVVA 597 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D L DFR+ ER QL TQVAGRAGR+ K G+VV+QT+ PE + + F Sbjct: 598 ADQMLNMPDFRARERTFQLLTQVAGRAGRSQKPGQVVIQTYTPEDRAIIQASQHNFKGFF 657 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQH----APLFLQQLRNLILSSPLADEKLWVLG 674 + + R+ PP+T + V + A + LR I+S L +LG Sbjct: 658 WEEIGYRKARNYPPFTHVIRVTLIHEKEEKVIKGAHSLVNSLRQGIVSDQNGHTSLDILG 717 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 P PA+ P+ +RWQ+ ++ L+ ++ + P S ++ ++VDP+ Sbjct: 718 PAPAVIPRLKNHFRWQVSVKGKLMDTLREFLHQGVRRFARDPISSGIQLNIEVDPL 773 >UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacteria RepID=A8ST73_9FIRM Length = 754 Score = 772 bits (1994), Expect = 0.0, Method: Composition-based stats. Identities = 238/750 (31%), Positives = 376/750 (50%), Gaps = 23/750 (3%) Query: 3 VAHVALPV---PLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQE-RIGIVVSVSDASELP 56 A V + + + R F Y++PE + + GC+V +PFG+ R G V+ +SD +E Sbjct: 5 YADVIIDISHEAIDRAFQYVIPEKLVSQIRTGCQVNIPFGRGNTMRTGYVIGISDRTEYD 64 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 ++K + V + L W + Y + + L +P+ Sbjct: 65 RTKIKTIDSVCTEGIAAPGRLVALAGWIKENYGSTMINALQTVMPVKKTVRSVVVRYVAL 124 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKI--WRDQVATLEFNDAALQALRKKGLC 174 T++ + + R+ + L L+ I L + A ++A++++G+ Sbjct: 125 AVDETDEIEYKYMKRNARAK--LRLLRTLKGENIIPMSKVTGELGVSSATVKAMQEEGVI 182 Query: 175 DLASET---PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSG 229 + ++ SD A + LN Q + + D +LL GVTGSG Sbjct: 183 TVTEDSCYRKVTSDAVRKEAFMAPDIELNDIQMSIINEFQDDVDKDVHRTYLLHGVTGSG 242 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVY+ + V+ QGKQA+V++PEI LT QTI F F V V++S L+ ER + Sbjct: 243 KTEVYVQCIRRVIEQGKQAIVLIPEIALTYQTIKYFTRYFGERVTVVNSRLSSGERYDQF 302 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 +AK G+ +VIG RSALFTPF+ LG+I+IDEEH+SSYK +YHAR+ A+ RA E Sbjct: 303 ERAKKGDVDVVIGPRSALFTPFERLGLIIIDEEHESSYKSDNPPKYHARETAIERARLEG 362 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPA 406 +ILGSATP++E+ ++RL + R + + A ++DL+ + + ++ Sbjct: 363 ASVILGSATPSVESYKKAMSGEFRLWTMDERVSDRKMADTSIVDLREELRRGNRSIISDE 422 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH--HLRCH 464 L + L Q++LF+N+RGF + C +CG + +CP CD T H A + L CH Sbjct: 423 LAEDITDRLSRHEQIMLFINKRGFNSFVSCRNCGEVVKCPHCDVSMTKHMASNGGKLVCH 482 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +C P +CPSCGS + G+GTE++EQ + +FP R+D+DTTS+K + EQ Sbjct: 483 YCGYTVEEPSKCPSCGSRLIGGYGVGTEKVEQEINRMFPVARTLRMDKDTTSKKNSHEQI 542 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L RG A ILIGTQM+ KGH F +VTLV +L D LF D+R+ ER L TQ AGR Sbjct: 543 LESFGRGDADILIGTQMIVKGHDFANVTLVGILLADLTLFDGDYRAGERTFDLLTQAAGR 602 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR G+VV+QT+ P++ + + Y +F E A R M+ PP + +++ A Sbjct: 603 AGRGDVPGKVVIQTYKPDNYAIVAAANQDYRSFYETESAYRSFMRYPPEWNMLVIMAVGE 662 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + + + ++ + I + + L V+GP K +R + ++H L + Sbjct: 663 DEEQLANTMDRMYSHIRGNHMNVRHLAVIGPAEPALAKVKDLYRKVLYIKHRDYQVLVDV 722 Query: 705 IN---GTLALINTIPDSRKVKWVLDVDPIE 731 N L T + + D +P+ Sbjct: 723 KNCVEEWLRDDETREINSGINVFFDFNPMN 752 >UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8L5_9GAMM Length = 730 Score = 771 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 308/734 (41%), Positives = 445/734 (60%), Gaps = 17/734 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 V VA PVPL R FDYL PE ++ G R+RVPFGK+ E I++ V+ + + Sbjct: 8 AVLRVAAPVPLRRPFDYLAPESQNPDRLRPGIRLRVPFGKR-EITAILLEVAAEASVNAE 66 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +L+ ++VLD +P+ T + L W++DYY HP+G+V A+P LR+GR + W Sbjct: 67 QLRPALDVLDDKPLLTPGIMALCKWSSDYYQHPVGEVFSAAIPKALREGRGLSETH---W 123 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 T +G+ + +L R+ Q +ALA L+ G+ + + + A L+ L KGL + Sbjct: 124 RLTTEGKGLPEGALSRAKSQAKALALLQTGEQLPEVLKNAGISGAVLRELTAKGLVERCR 183 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 T + A+ L+ EQ +AV A+ D+FS LL GVTGSGKTEVYL ++ Sbjct: 184 ITTSL----PSAALKENGPPLSEEQGSAVAAVE--WDSFSCHLLQGVTGSGKTEVYLRLI 237 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 L +G+QALV++PEIGLTPQT+ RF RF +PV VLHSGL+D +R +AW A++G A Sbjct: 238 AACLDRGEQALVLIPEIGLTPQTVKRFEARFQSPVAVLHSGLSDGQRFAAWQAAQSGTAG 297 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+GTRSA+FTP G+I++DEEHD SYKQQ+G+RY ARD+AV RA E P++LGSAT Sbjct: 298 IVMGTRSAIFTPLARPGLIIVDEEHDGSYKQQDGFRYAARDVAVKRAQLEGCPVMLGSAT 357 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA- 417 P+LE+L N ++++YR L R G + +DL+G ++ AG++ L+ +R+ ++A Sbjct: 358 PSLESLENARRERYRHHFLRGRQGGGELPMLQTVDLRGLQLNAGISDYLMAAIRETVEAQ 417 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q +LFLNRRGFAP L CH CGW+A C CD T+H + LRCHHC +QR +P QCP Sbjct: 418 KRQALLFLNRRGFAPTLQCHSCGWVAGCDHCDARLTVHLRKRCLRCHHCAAQRALPAQCP 477 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG T L+ GLGTEQ E+ L + P+ R+D D A++ L H +++ Sbjct: 478 DCGGTALLTHGLGTEQTEEFLRNVL-SCPVHRVDSDAMRGVDAMQSLLEVAHSEEPCVIL 536 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQML KGHHFP V LV ++D D L+SADFR ER AQL QVAGRAGR G+V++Q Sbjct: 537 GTQMLTKGHHFPAVQLVGVIDADALLYSADFRGEERMAQLVVQVAGRAGRESAGGKVLIQ 596 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH+P+ PL + L + +++ L +RR LPP+ +++R++ N + FL+ ++ Sbjct: 597 THYPDDPLFEALRHGHFESITRSLLDKRRASGLPPYGQLMLLRSDARNERDGEAFLRAVQ 656 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 + D +L +GP+P+ P+R GR+RWQ+ SR + + Sbjct: 657 KEVTGFLPPDCQL--IGPLPSAMPRRAGRFRWQLWCLSASRGSAMAAARLLVERAEGLRK 714 Query: 718 SRKVKWVLDVDPIE 731 SR++ W +DVDP + Sbjct: 715 SRELSWFIDVDPSD 728 >UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I505_DESAP Length = 735 Score = 770 bits (1988), Expect = 0.0, Method: Composition-based stats. Identities = 263/745 (35%), Positives = 377/745 (50%), Gaps = 30/745 (4%) Query: 1 MP---VAHVALPVPL---PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDA 52 MP A + + +PL + + Y +PE + G RV VPFG++Q G VV Sbjct: 1 MPERAYAEIVVDLPLSRVDQVYHYAVPERFRTELCLGSRVLVPFGRRQ-LAGYVVGFRSQ 59 Query: 53 SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 + + ++K +++VL S+P FTH ++ L W A+ Y L R A Sbjct: 60 AAVE--QVKDILDVLSSQPAFTHELYTLARWMAERYLCTTAQALQCI----AAPSRGAGP 113 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATL-EFNDAALQALRK 170 +A G + D L +PKQ+Q +R+ + R QVA L + L + Sbjct: 114 RYEEGVYAAPGGGSADQERL--TPKQRQVWRTVREHPGLTRAQVAALSGVTPVVVARLLE 171 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA--WLLAGVTGS 228 KG+ + + + + + ++ E RL EQ A+ AI +LL GVTGS Sbjct: 172 KGVLTTSRRSVARNPYPVSQTIT-ELPRLTGEQLRALEAIEKGFQAQRKEFFLLHGVTGS 230 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTE+YL L QG+Q LV+VPEI L Q I +F+ RF V VLHS L ER Sbjct: 231 GKTEIYLRAAAGALVQGRQVLVLVPEITLATQLIHQFKARFGDLVAVLHSRLGAGERYDE 290 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + GEA IV+G RSA+F P +N+G+ V+DEEH+ YKQ+E RY D+ RA Sbjct: 291 WNRIFRGEAPIVVGARSAVFAPLQNIGLFVLDEEHEPGYKQEEAPRYLTGDVVRARAALS 350 Query: 349 QIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LA 404 + ++ GSATPAL T + ++LL+LT R V+DL+ + + Sbjct: 351 KAVVVFGSATPALRTYARALTGQQHQLLKLTSRVDGRSLPQVRVVDLREELQAGNRHVFS 410 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 L R+R+ L QV+LFLNRRG A +LC CG C C T H+ L CH Sbjct: 411 RYLAGRIREKLDQGQQVLLFLNRRGLATIVLCRACGEALSCAHCAISLTYHR-DGSLHCH 469 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +C +R +P CP CG L G GT+++E+ LFPG + R+D DT + K + ++ Sbjct: 470 YCGYRRNLPAACPVCGGERLSRFGTGTQRVEEETQRLFPGARVVRLDGDTVTGKRSHDRL 529 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L G A ILIGTQM+AKG P VTLV +++ D L D++SAER QL TQVAGR Sbjct: 530 LDSFREGQADILIGTQMIAKGLDLPGVTLVGVVNADTTLLLPDYQSAERTFQLVTQVAGR 589 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR GEVV+QT+HP+H +Q + Y+ F + +A RR M PP+T+ V Sbjct: 590 AGRGPVPGEVVVQTYHPDHYSIQAATSQNYELFFIREMALRREMGYPPFTTLARVLFRGR 649 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 QQ R L+ + D ++ V+GP P + +R ++L+ P R L+ + Sbjct: 650 RESQVEQAAQQFRELL--ALPEDGRIQVMGPAPPPVARIKDYYRRHLILKAPKRKELRML 707 Query: 705 INGTLALINTIPDSRKVKWVLDVDP 729 + TL KV +D+DP Sbjct: 708 LVETLDKFEAG-GRNKVLVGIDIDP 731 >UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENF9_ACIF5 Length = 720 Score = 769 bits (1987), Expect = 0.0, Method: Composition-based stats. Identities = 326/729 (44%), Positives = 436/729 (59%), Gaps = 21/729 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 +A+ VPL R F Y P ++ G RVRVPFGK R+GIV+ + S P LK + Sbjct: 8 IQIAVMVPLRRIFSYAPPPEGRLQPGMRVRVPFGKG-SRVGIVLGYA--SCPPDVTLKPI 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP-AANAPMWYWFATE 122 +VLD+ PV ++ +L+ + A YYHHPIGD ALP LLRQGRP AP Y + + Sbjct: 65 GQVLDAHPVLPSALQQLVQFGAAYYHHPIGDAWATALPTLLRQGRPLPEPAPQGYRLSID 124 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 + Q K QQ L ++ E A L+ ++G + E Sbjct: 125 EAQTAQRQPGKL---QQALREHLITHRVVHTTAIPKEL-RATLRQAVRRGWIEAVMEDTP 180 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + V+ LNTEQA+AV + A F+AWLL GVTGSGKTEVYL + L Sbjct: 181 PTQ------VAPSPHCLNTEQASAVTQLRMARG-FNAWLLEGVTGSGKTEVYLEAIRPHL 233 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 G Q LV+VPEIGLTPQ + R + RF A V LHS +D ERL W A G ++I Sbjct: 234 ESGAQILVLVPEIGLTPQLVERCQMRFGARRVAALHSAQSDGERLRIWAAAAAGRIQVII 293 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P L +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSATP+L Sbjct: 294 GTRSAVFVPLPRLAMIVVDEEHDPSFKQQNGWHYSARDLAIQRARLENIPIVLGSATPSL 353 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 E+LCN Q+ +YR L+L +RA +A + ++ L+ + +Q G++ L+T ++ L+A NQV Sbjct: 354 ESLCNAQKGRYRHLQLRQRATSADLPVMTIVPLRRENLQGGISTTLLTACKETLEAGNQV 413 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 +LFLNRRG+APA+LCHDCG + +CPRC T H+ Q LRCHHC + P+ CP+C S Sbjct: 414 LLFLNRRGYAPAVLCHDCGHVIQCPRCSAPMTWHRRQERLRCHHCGHESRWPQACPACHS 473 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 T L+ G GTEQLE+ L FP PI RIDRD + +L +A++ + A IL+GTQM Sbjct: 474 TALITAGQGTEQLEEVLRQRFPQTPIWRIDRDALHDRDSLATAVADIRQNRAAILVGTQM 533 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 LAKGHHFP VTLV +++ D LFSADFR+ ER Q QVAGRAGR + G+V+LQTH P Sbjct: 534 LAKGHHFPAVTLVGIINTDQGLFSADFRAPERLLQTVVQVAGRAGREERPGQVLLQTHLP 593 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 EHPLLQ+L Y AE L ERR LPP+ + ++RAE H FL + Sbjct: 594 EHPLLQSLARGDYRPPAEALLNERRAAGLPPFAALTLLRAEAHQRYRVDTFLSAACQCVP 653 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 + + + GP+P+L +R G R ++ +Q P+R ++Q +N L + + +R V Sbjct: 654 PAL-----VEISGPLPSLMERRAGFERAELWVQAPNRTQMQKALNLWLPQLAGLSSARHV 708 Query: 722 KWVLDVDPI 730 +W LDVDP+ Sbjct: 709 RWTLDVDPL 717 >UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JME8_9BACT Length = 749 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 264/737 (35%), Positives = 388/737 (52%), Gaps = 26/737 (3%) Query: 13 PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 R Y LP M V+ G VRVP G++Q IG++V +LPL +LK V++++ Sbjct: 17 DRPLHYRLPGSMEAMVEPGSLVRVPLGRRQT-IGLIVEKGCEPDLPLMQLKLVLDLVYPT 75 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P+ T ++ RL W YY I +VL +P +RQG A + T +A+ Sbjct: 76 PIMTPALLRLGSWLRQYYGASIQNVLETMIPGPVRQGMKAKHDKYVTAVKTVDAEALAAL 135 Query: 131 SLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 K++PKQ + L Q + + + L + AA L KKG + E + Sbjct: 136 E-KKAPKQFELYQFLAQQFRAQKKSLVLNRLGASPAAYTGLLKKGFITEEARKVERVAYD 194 Query: 188 TNYA----VSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + + + LN EQAT V +I + TF LL GVTGSGKTEVY++ +E Sbjct: 195 DELGDVEYATNQEIVLNKEQATCVQSIIESVRTGTFITHLLYGVTGSGKTEVYIAAMEEA 254 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERF----NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 L GK L +VPE+ LTPQT+ R R RF +A V HS L+D ERL AW+ NG A Sbjct: 255 LKAGKSVLFLVPEVALTPQTVGRLRSRFTEHKDAHAVVWHSSLSDGERLDAWMALANGTA 314 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +V+G RSA+F P NLG++++DEEH+ ++KQ E RYH RD+AVYR++ E + +LGSA Sbjct: 315 RVVVGARSAVFAPLPNLGLVIVDEEHEPAFKQDETPRYHGRDVAVYRSYLESVVCVLGSA 374 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQ 413 TP+LET NV++ KY+L LT+R + + I HV+D++ + ++ ++ L ++R Sbjct: 375 TPSLETFRNVKRGKYKLDSLTKRIDDRQLPIMHVVDMRIEMMRTRKPVTISSLLAEKLRD 434 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 + Q ILF+NRRG+ ++C +CG + EC C T H++ + L+CH C + P Sbjct: 435 RWEKGEQSILFINRRGYNSTMMCTECGHVEECKHCSLPMTFHRSDNTLKCHLCGHEADPP 494 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 +CP C S + G GT+++E + + P I RID DT +K + L E +G Sbjct: 495 WRCPECKSDAIRGKGSGTQRIEDVVKSILPKARIVRIDTDTMGKKHLFREILGEFRKGKI 554 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 +L+GTQM+AKG FP+VTLV ++D D +L DFR+ ER QL QV+GRAGR GE Sbjct: 555 DLLVGTQMIAKGLDFPNVTLVGMVDADLSLHVPDFRANERTFQLLVQVSGRAGRGDLAGE 614 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 VV+QT P +Q DAF E + R Q PP+ V N A F Sbjct: 615 VVVQTFTPHADPIQFARRGEVDAFLEVEIESREQFQYPPFRHLVRQVFRSRNADKAMFFA 674 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 +Q + + K+ + GP P K ++R+ I + L + A Sbjct: 675 EQFARKVEARMAG--KIEMRGPTPCSIEKMKDQYRFHIWYFTTNVSGLMRELKTVEA--- 729 Query: 714 TIPDSRKVKWVLDVDPI 730 + + V +LDVDP+ Sbjct: 730 EVILPKDVIQILDVDPM 746 >UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V792_9PROT Length = 724 Score = 766 bits (1979), Expect = 0.0, Method: Composition-based stats. Identities = 267/734 (36%), Positives = 409/734 (55%), Gaps = 14/734 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLP FDY + + + + G RV VPF ++ + +G+V+ SEL + ++ Sbjct: 1 MQIVRVALDVPLPTLFDYTVDDAVVL--GQRVIVPF-RRSQLVGVVMECVMFSELAVEKI 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K VV +L + + LL + ++YYH+PIG + ALP LR +P +++ Sbjct: 58 KPVVRILSDSEPISSKLLALLRFCSEYYHYPIGQTVIPALPARLRSDKPITVKHEYHYRL 117 Query: 121 TEQGQAVDLNSLKRSPKQQQA-LAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 + +DL +++ + + AL+ + + + L + A L+ L + G + Sbjct: 118 LDGAPPIDLIPQRKTAARNMVKMLALQPCNLQQLKTVALTAS-AQLKWLIEAGWVEAFEV 176 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 P R + + + L EQ V A+ + + +LL G+TGSGKTEVY+ ++ Sbjct: 177 NPLACLPRMHCFANAHK--LTDEQQQVVDAVTQTSG-YRCFLLHGITGSGKTEVYVHLIN 233 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAWLKAKNGEAA 298 VL G Q L++VPEI LTPQ F RF V LHSGL+++ERL W +A++G A Sbjct: 234 RVLQTGGQVLLLVPEINLTPQLEHYFLSRFPVATLVSLHSGLSENERLKHWQQAQSGAAG 293 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+GTR ++F L +I++DEEHD+S+KQQ+G RY ARD+A++RA +PI+LGSAT Sbjct: 294 IVLGTRLSVFAELPKLSLIIVDEEHDASFKQQDGLRYSARDVAIFRAKQCGVPILLGSAT 353 Query: 359 PALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 P+ E+ N +Y +L+LT RA +A + K + G++ L+ + + Sbjct: 354 PSFESYHNALNGRYEMLKLTGRALADANLPEIKFIHSKQTVMVDGISEVLLREIAHRITR 413 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q +LF+NRRG+AP L+C +CGW+++C C LH LRCHHC Q VP CP Sbjct: 414 GEQSLLFINRRGYAPVLMCTECGWLSDCKNCAGKMVLHTKDQRLRCHHCGYQIHVPTLCP 473 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C L+PVG GT+++E+ L FP I R+DRD+T K E +++ I++ Sbjct: 474 ECRHPELLPVGSGTQRVERVLIDRFPEARILRVDRDSTRNKRTWEAMRSKITANEVDIMV 533 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGH FP +TLV +L+ D AL+S+DFR+AE+ QV+GRAGRA K GEV++Q Sbjct: 534 GTQMLAKGHDFPALTLVGILNPDSALYSSDFRAAEKLFSQLMQVSGRAGRADKPGEVLIQ 593 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T P+HP+ + L ++ +A LAER M PP+ ++RAE +L + Sbjct: 594 TEFPDHPMYRCLQQHDFEGWAASQLAEREMADFPPFAFQAMLRAEGLVEADVYAYLNMAK 653 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L+ + + + G VPA +R R Q+L+Q SR LQ + + + Sbjct: 654 ---LAGVKLNHPVEIFGVVPASLARRANHVRAQLLIQANSRRVLQQFLRVWQPGLADL-A 709 Query: 718 SRKVKWVLDVDPIE 731 S K++ LD+DP+E Sbjct: 710 SNKLRCSLDIDPLE 723 >UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY60_9FIRM Length = 750 Score = 766 bits (1978), Expect = 0.0, Method: Composition-based stats. Identities = 238/744 (31%), Positives = 380/744 (51%), Gaps = 18/744 (2%) Query: 2 PVAHVALPV---PLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASEL 55 A + + + L R F Y +P + V+ G RV VPFG+ G VV++ ++ Sbjct: 7 RYADIIIDISHEALDRVFQYRVPLSLWKEVRPGSRVFVPFGRGNRETEGYVVAIRPEADY 66 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 +++K ++ V + ++ + + Y + L LP+ + +P + Sbjct: 67 EESKIKEILRVNTEGVSVESELIKVASFLKEQYGSTMIQALRTVLPVKAKM-KPKEEVFI 125 Query: 116 WYWFATEQGQAVDLNSLKRS--PKQQQALAALRQGKIWRDQ-VATLEFNDAALQALRKKG 172 E Q + ++ + + + +G+I +++ V F ++ L ++G Sbjct: 126 TLSADIEAAQKLLAEWEQKHYVARARFLFLLIEKGRITKEEAVKGCNFPLKEIRRLAEQG 185 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGK 230 + L S + + LN EQ D +LL GVTGSGK Sbjct: 186 IVKLESRIKYRNPFP-ELTKRSTGWPLNEEQQAVADNFQKDYDNGKRGTYLLYGVTGSGK 244 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL+++E VLA+ KQ +V++PEI LT QT+ RF ERF + V++S ++ E+ A Sbjct: 245 TEVYLALIEQVLAKKKQVIVLIPEISLTYQTVRRFYERFGERIAVINSRMSKGEKSDACE 304 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + + GEA ++IG RSALF P + LG+I+IDEEHD +YK +YHAR+ AVYRA Sbjct: 305 RIRAGEADVIIGARSALFAPTERLGLIIIDEEHDGAYKSDTSPKYHARETAVYRAGLCGA 364 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 ++LGSATP++E +Y+L L +RAGNA ++DL+ + + + L Sbjct: 365 SVVLGSATPSVEAYARALSGEYKLWTLKKRAGNAMLPTTQIIDLREEFKKGNRSIFSGEL 424 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 ++ + L Q++LFLNRRGFA + C CG + +CP CD T H+ LRCH+C Sbjct: 425 HKKIEERLAKKEQIMLFLNRRGFAGFVSCRACGQVIKCPHCDVTLTYHR-NGKLRCHYCG 483 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + +QCP C S+H+ GLGTE++E L FP + R+D DTT RK A E+ LA Sbjct: 484 YEETFIKQCPICKSSHVATFGLGTEKVEAALHAEFPTARVLRMDMDTTRRKHAHEEMLAA 543 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 +G A IL+GTQM+ KGH + +VTLV +L D +L DFRS E+ QL Q AGRAGR Sbjct: 544 FSKGEADILLGTQMIVKGHDYANVTLVGILAADLSLHEQDFRSGEKTFQLLCQAAGRAGR 603 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 K+G+V++QT+ PEH + T Y+ F ++ R++M PP +++ + + Sbjct: 604 GDKRGDVIIQTYSPEHYSITTAAEHSYENFFKEEYTYRQLMGYPPCAHMLVILVQSGDES 663 Query: 648 HAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + + ++ +I S + E + +L P A K +R + L+H + L + Sbjct: 664 QSVVARLRIEKMIEQSQVGQEVPVQILAPGQASLSKLKDVYRQVLYLKHKDKETLLDLKR 723 Query: 707 GTLALINTIPDSRKVKWVLDVDPI 730 ++ P + D DP+ Sbjct: 724 RLEPVLEKHPMFAGITIQFDFDPL 747 >UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus RepID=D2RNT9_ACIFE Length = 797 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 267/804 (33%), Positives = 387/804 (48%), Gaps = 84/804 (10%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A VA+ +P + R F Y +PE + + G RV VPFG QQ G +V +L Sbjct: 1 MEYAKVAINLPAKNIFRQFTYHVPETLDFLGQGWRVVVPFG-QQLLEGFIVEEDREPDLS 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL------------ 104 ELK + +V+ +EP F + W + YY + + L +P Sbjct: 60 -RELKDIADVVGTEPWFDSEMLATAYWLSQYYLCTLAEALRLFIPGRKSLAAVGKYVPVP 118 Query: 105 ----------------------------------------RQGRPAANAPMWYWFATEQG 124 + + + E+ Sbjct: 119 EAEGLSRPEQELYDFLTLKGPLPRKAIRRIPGGETALKGLIARKAVVLSYDVKYKLREKT 178 Query: 125 QAVDLNSLKRSPKQQ----------QALAALRQGKIWRD-QVATLEFNDAALQALRKKGL 173 + + + Q+ AL L GK ++ A L+ L +KG Sbjct: 179 ERTFTATPEGLAAQENGEVRGKSQQAALDLLPYGKTASAGELEARGITSAVLRNLVRKGW 238 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVTGSGKT 231 L D E L L EQ A+ A+ +A + +LL G+TGSGKT Sbjct: 239 L-LEGRRRVLRDSYQGLEARKETLELTEEQQAAIQAVDAARENREARTFLLQGITGSGKT 297 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + L G+Q +V+VPEI LT Q + RF+ F A V V HS L+ SER W + Sbjct: 298 EVYLRLAARALQAGQQVMVLVPEIALTGQIVKRFKAWFGAGVAVAHSRLSASERGDVWSR 357 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 ++G+A ++IG RSA+F PF +LG+I+IDEEH+ +YKQ+E YHAR +A YRAH ++P Sbjct: 358 MRSGQARVLIGVRSAVFCPFADLGLILIDEEHEGTYKQEERPSYHARLVAQYRAHYRKVP 417 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAG---LAPAL 407 ++LGSATP LE+ ++ Y LLRLT RA + ++D++ + Q L+ AL Sbjct: 418 VVLGSATPDLESYYLAEKGGYTLLRLTHRARSGSHLPKVSIVDMREELHQGNRTVLSEAL 477 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 TR+ +Q Q I+ LNRRGF+ +LC DCG CP C H + + CH+C Sbjct: 478 RTRLEHVVQNGEQAIVLLNRRGFSTFVLCRDCGESLSCPNCAVSLVYHAREQLMECHYCG 537 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 PVP +CP CGS + G GTE+ E+ + L PGV R+D+D+TS K A EQ L Sbjct: 538 YTEPVPTKCPYCGSPRIRFFGTGTEKAEREIRELCPGVKPLRMDQDSTSGKFAHEQILQA 597 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G +L+GTQM+AKGH P+VTLV +L D L DFRS ER L TQ AGRAGR Sbjct: 598 FRSGLYNVLLGTQMVAKGHDIPNVTLVGVLSADSQLNLPDFRSGERCFALLTQAAGRAGR 657 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 K GEV+ Q + E+P+LQ + Y+ FA+ L +R+ + PP+T + + + Sbjct: 658 GDKPGEVIFQAYDAENPILQLAARQDYEGFAKMELEQRKELSYPPFTRMLKITVLHKKEE 717 Query: 648 HAPLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 A Q+L N + + L L +LGP PA+ + +R +LL+ P ++ + Sbjct: 718 EALAIAQKLVNALEAWQLESGHPLEILGPFPAIVARVNQIYRINVLLKSPRMKPVKEWLR 777 Query: 707 GTLALINTIPDSRKVKWVLDVDPI 730 + +P+ DVDPI Sbjct: 778 Q--SEYRELPN-----VYFDVDPI 794 >UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae RepID=Q1DCD8_MYXXD Length = 795 Score = 765 bits (1975), Expect = 0.0, Method: Composition-based stats. Identities = 279/743 (37%), Positives = 396/743 (53%), Gaps = 22/743 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A +A+ P+ F Y LP+ + ++ G RV VPFG+ G + + L Sbjct: 55 LASIAVGRPVRGEFTYTLPDELAGRLEPGQRVLVPFGRGTAL-GFYLGPASPPTGEKVRL 113 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAV VL+ P + LL +AA +Y +P+G+V+ ALP L + A Sbjct: 114 KAVQRVLEDSPSLPKDLIALLRFAAVHYRYPLGEVIRGALPPGLSKAVDEKEARPDVQHF 173 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQ---GKIWRDQVATLEFNDAALQALRKKGLCDLA 177 L R+P Q ALA L + + L+ L +G L Sbjct: 174 AVALVNEVPPELSRAPAQSAALAYLLAVGGSAPLEEVAHAIPGARETLKKLATRGFARLE 233 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYL 235 +T E S + G L EQ A + +A D TF +LL GVTGSGKTEVYL Sbjct: 234 EKTVEAS--VKEGLIQGRPDHLTPEQDAAGVVLRAALDAATFQPFLLHGVTGSGKTEVYL 291 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 E+ L+ GK +L++VPEI LTPQ + RFR RF A V VLHS L D ERL W + G Sbjct: 292 RAAEHALSLGKGSLILVPEIALTPQLVGRFRSRFGAEVAVLHSALKDRERLFHWQALRRG 351 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + I +G RSA+F P NLG+IV+DEEHD S+KQ+E RY ARDLAV R ++LG Sbjct: 352 DVKIAVGVRSAVFAPVDNLGLIVVDEEHDPSFKQEEKLRYQARDLAVVRGKQAGAVVVLG 411 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--------LAPAL 407 SATPALETL NV++ +Y+LL L R + ++DL+ ++ + G L+P L Sbjct: 412 SATPALETLENVKRGRYQLLELKHRVDDRPMPTIELVDLRVERPREGVVTEEAPILSPPL 471 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + M + + QVILFLNRRG + LLC CG +C CD T H++Q+ + CH+C Sbjct: 472 LEAMAETIGRGQQVILFLNRRGHSTVLLCEVCGLSLKCSECDVCLTHHRSQNRVVCHYCG 531 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 PVP QC C L +G+GTE++E + P ++R+DRD+ S L + LA Sbjct: 532 LAMPVPEQCLECTGPMLK-LGIGTERVEAEVLERIPTARVARLDRDSASSAERLTEMLAS 590 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 R +L+GTQM+AKGH FP VTLV ++ D +L DFR+AER L TQV+GRAGR Sbjct: 591 FARRELDVLVGTQMVAKGHDFPGVTLVCVVMADTSLSIPDFRAAERTFHLLTQVSGRAGR 650 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G V++QT++P+ ++ +L +D FA Q L R+ + PP++ VR E + + Sbjct: 651 GKDPGRVLVQTYNPDAEPVRRVLAHDFDGFANQELEWRKALAYPPYSRMAAVRLEGEHPE 710 Query: 648 HAPLFLQQLRNLILSS-PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + L N++ P A + +LGP A + G+ RWQ+LL+ P+ L ++ Sbjct: 711 QTASVARSLGNIVSRHMPPASAGVRMLGPALAPISRIRGKTRWQLLLKGPTHTALAPLLA 770 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 A + +P + VK V+DVDP Sbjct: 771 RLEAALVDVPSA--VKVVIDVDP 791 >UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z8I4_9GAMM Length = 735 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 301/731 (41%), Positives = 428/731 (58%), Gaps = 10/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + A+P+P+ DYL +G G R+ +P G +Q +G+V + + + +L Sbjct: 11 LLRCAVPIPVRGYLDYLPVKGGNAVPVAGGRILIPLGSRQ-LVGVVTEILGFTAISPEKL 69 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K LD P+ V LL W ADYY HP G+ L L R+G P A+ + Sbjct: 70 KCAKAYLDDTPLIDSIVLELLGWTADYYQHPPGETLILGLSPRERRGEPPASTHEAGFSL 129 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 T +G+ + +L R+P+QQ +AALR G R ++ + F L+AL + L + Sbjct: 130 TIRGEGLSDAALSRAPRQQALIAALRAGPKTRAELRAIGFKPDNLRALITRSLIE----- 184 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + L N EQ+ A+ I+++ FS LL GVTGSGKTEVYL + Sbjct: 185 -PMAMLANKTWSCRAPLPANNEQSLAITHINASLGEFSCHLLEGVTGSGKTEVYLQAIAA 243 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 LA+ +Q LV++PEIGLTPQ + RF ERF+AP+ LHSGL ++ER W A++G+AAI+ Sbjct: 244 ALARQEQTLVLIPEIGLTPQLVRRFNERFDAPIVTLHSGLGNAERDRNWQAARSGQAAII 303 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+F P G+I++DEEHD S QQ+G RY ARD+AV RA PI+LGSATP+ Sbjct: 304 IGTRSAVFAPMLTPGLIIVDEEHDVSLSQQDGLRYSARDVAVKRAQLSGCPIVLGSATPS 363 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +YR RLT+RA A P +H++D++G ++AGL+P L ++M + L Q Sbjct: 364 LESMANATNARYRWHRLTQRAAGASPPTKHIVDIRGLALRAGLSPQLQSKMTEVLSRGEQ 423 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V+LFLNRRGFAP LLCHDCGW AEC CD TLH+ ++CHHC Q P+P++CP C Sbjct: 424 VLLFLNRRGFAPTLLCHDCGWTAECQNCDARQTLHKKPPRVQCHHCGQQSPLPKRCPECQ 483 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 LV GLGTEQ EQ L FP +P+ R+D D+ S + A+ V + GA I++GTQ Sbjct: 484 GHRLVASGLGTEQTEQALRKDFPEIPVHRVDSDSMSGRHAMATFTQAVEQTGACIMLGTQ 543 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 +LAKGHHFP VT V +LD D L S DFR ER AQL TQV GRAGRA + GEV++QT H Sbjct: 544 LLAKGHHFPKVTCVGILDADSLLMSPDFRGEERLAQLLTQVGGRAGRAQQPGEVIVQTRH 603 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHP++ +L K + A + Q L R+ LPP + +R + + + FL + Sbjct: 604 PEHPIITAVLEKSWRALSAQLLLSRKAQGLPPNGALAALRCDSASAESGAAFLLAIMEKY 663 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + + ++GP+ A +R G +R I++ R ++ + +AL + Sbjct: 664 HRT-TPNPSIRLVGPLSAPMARRAGLYRSHIVITGAQRSKVHASVKILVALASEHRIPTG 722 Query: 721 VKWVLDVDPIE 731 ++W +D+DP E Sbjct: 723 LRWFVDIDPSE 733 >UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=A6BZI9_9PLAN Length = 800 Score = 762 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 250/748 (33%), Positives = 387/748 (51%), Gaps = 21/748 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASE-LP 56 + +A + L P+ R F Y +PE + ++AG RV+VPFG+ + G V V E LP Sbjct: 55 LYLAEIVLNRPVDRVFHYKVPEELRPLLRAGHRVQVPFGRGNQLAPGYCVGVGPGDENLP 114 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK+V +LDS P+F + +L W AD Y G VL +P ++ ++ Sbjct: 115 SVRLKSVEAILDSRPLFNAKMLKLTRWIADRYLCSWGQVLDCVVPAGVKNQAGTRMVTVF 174 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---IWRDQVATLEFNDAALQALRKKGL 173 + K KQ+ AL+ + E + +L+KK + Sbjct: 175 EVVPVPGEAEQNEIIEKLPAKQRAVYDALKSAARPLTLDELTQAAECGSGPVNSLKKKAV 234 Query: 174 CDLASETPEF----SDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTG 227 + ++ D + + L+LN +Q A+ I +A ++L GVTG Sbjct: 235 ISSHQKRMQYFENDDDVVHAHIQKQDDLKLNRDQRLALDQILTAIRGQQSETFVLHGVTG 294 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVY+ + V++ G+QA+V+VPEI LTPQ I RFR RF++ V VLHS L DS+R Sbjct: 295 SGKTEVYIQAIREVVSYGQQAIVLVPEISLTPQAIQRFRSRFDS-VAVLHSHLTDSDRHY 353 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W G+ +++G RSA+F P +LG+I+IDEEH++S+KQ+ RYHAR++A R+ Sbjct: 354 HWQNIAAGKVQVIVGARSAVFAPAPHLGLIIIDEEHETSFKQETAPRYHAREVARKRSEL 413 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLA 404 E++P+ILGSATP L + V +KK L+ + RR + +++D++ + + Sbjct: 414 ERVPLILGSATPTLNSWLRVIEKKDTLISMPRRVNDLPMPNVNIIDVRNDVQIRRNESIG 473 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 L T M+ L A QVILFLN RG++PAL C CG +CP C+ T H+ ++ CH Sbjct: 474 RVLFTGMQHALGAGGQVILFLNLRGYSPALWCKGCGNSVKCPHCEISLTWHRDKNLAVCH 533 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 CD P CP CG+ L VG GT++LE+ + FPG R+D DT G+ + Sbjct: 534 SCDFSAKPPTNCPGCGAPGLRFVGAGTQRLEEEVKAKFPGYSCQRMDSDTMRGVGSHARV 593 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L G IL+GTQM+AKG FP+VTLV ++D D L D ++ER QL QVAGR Sbjct: 594 LNAFAGGEVDILLGTQMIAKGLDFPNVTLVGVVDADTMLHQPDLFASERTFQLIAQVAGR 653 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 GR + G V +Q+ P P + + FA L R+ M PP++ + V Sbjct: 654 TGRGMQGGRVFVQSASPTEPAIVKAADHDFLGFARLELGHRKEMLAPPFSHYARVILRGP 713 Query: 645 NNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 +H F +QL ++ + + ++ +LGP PA + +R+ L + + + Sbjct: 714 QEEHVEHFARQLATILSDAASEKQLQVQILGPAPAPIIRLKKYFRYHFQL---AALEVDQ 770 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPIE 731 I+ + +P + +++++DVDP+ Sbjct: 771 ILQLWHEVEGKLPREKGIEYIIDVDPVN 798 >UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5758 Length = 800 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 262/758 (34%), Positives = 389/758 (51%), Gaps = 38/758 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGC--RVRVPFGKQ-QERIGIVVSVSDASELPLNE 59 A V PL + Y +P + K G RV VPFGK + G V V+D E Sbjct: 46 FADVVFDRPLDHAYTYAVPAELVAKIGVGKRVEVPFGKGGKATAGFCVRVTDDEPTSGYE 105 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K V VLD + + + +L W ADYY G VL +P +R A M + Sbjct: 106 IKTVTRVLDDDAIVDEHLMKLTRWMADYYLCGWGQVLHAVVPAGVRDN---AGTRMASFV 162 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV---ATLEFNDAALQALRKKGLCDL 176 +++ +P+Q+ AL L++ + + + + L KKGL Sbjct: 163 EPVPRESLPNPLPTVTPQQKAALDKLKKENRPLEILQLARLAKCTAGVVSGLIKKGLVRK 222 Query: 177 ASETPEFSDWRTNYAVSGER----------LRLNTEQATAVGAIHSAA--DTFSAWLLAG 224 SE E + + E + LN +Q I A + +LL G Sbjct: 223 FSERIETEASGAHESAESENAQGTDEARKEIELNADQLRVWKPIGEALAAGGYHPFLLHG 282 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VTGSGKTEVYL +E V+ QGK+ +V+VPEI LTPQTI+RF+ R + V+HS L D+E Sbjct: 283 VTGSGKTEVYLRAIEEVVKQGKEVVVLVPEISLTPQTISRFQGRCGN-LAVMHSHLTDAE 341 Query: 285 RLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYR 344 R W + G +V+G RSA+F P + LG+I+IDEEH++S+KQ+ RYHARD+AV R Sbjct: 342 RGGYWRRIATGHIHVVVGARSAVFAPTRKLGLIIIDEEHENSFKQESTPRYHARDVAVMR 401 Query: 345 AHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG-- 402 A E IPI++GSATP+LE+ N ++ Y +L + R + V+DL+ + G Sbjct: 402 ARLEGIPILMGSATPSLESWANAEKGNYTVLSMPNRVASRPMPAVKVVDLRHEPKAPGKP 461 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + P L MRQ L+ Q+IL LNRRGF+ + C CG++A+C CD T H+ ++ Sbjct: 462 GAIGPTLEAAMRQTLKDKGQIILLLNRRGFSTHVHCEACGYVAQCANCDLAMTFHRTKNS 521 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L CH+C + ++CP+C + GLGTE+L+ + FPG R+D DT S+ G+ Sbjct: 522 LMCHYCGFETAPFQKCPTCAQPSMRYQGLGTEKLQVEIEEKFPGSVCQRMDSDTMSKPGS 581 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 ++ L G +IL+GTQM+AKG FP+VTLV +++ D L DFRSAER QL Q Sbjct: 582 HQRVLDAFRDGLIQILVGTQMIAKGLDFPNVTLVGVVNADVGLHLPDFRSAERTFQLLAQ 641 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 VAGRAGR + G+V++QT PEHP + + Y+ FA+ L R++ + PP+ + Sbjct: 642 VAGRAGRGTRGGQVLVQTFTPEHPCITLASHHNYNEFAKMELVHRKLHKYPPYERMARMI 701 Query: 641 AEDHNNQH--------APLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQI 691 + A F + +R + + P + + +LGP + +R+ Sbjct: 702 VRSEKEEAAAAFADVLATAFKEAIRRAMSTGRPSPEAPVRLLGPAECPVFRLNNFYRFHF 761 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 LQ S L ++ LAL V++ +D+DP Sbjct: 762 QLQSDSSAVLHEVLRNVLALA---KPPHGVEFQVDIDP 796 >UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB01_9CHLA Length = 746 Score = 760 bits (1964), Expect = 0.0, Method: Composition-based stats. Identities = 252/745 (33%), Positives = 386/745 (51%), Gaps = 26/745 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V L V + +T DY +PE + +A G RV VP + R G ++ + + ++ Sbjct: 8 KYAAVILDVAIEKTLDYGIPEDLVPEAKKGVRVEVPL-RGSLRNGYIMEIKETADY--AR 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + + + + ++ L LW + YY P+ V +P +R+ Sbjct: 65 VSPIQRIFPD-VQISEDLFELALWISRYYLAPLSQVFKILVPSSIRKDMQHKQQLFVMRK 123 Query: 120 -ATEQGQAVDLNSLKRSPKQQQALA---ALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 EQ + V + Q L +++G + + + + + + L KG Sbjct: 124 QTREQLKEVCETIRNKHSAQAAVLDEMLLVKKGILLSELLEKTGGSRSPVDTLAAKGYLL 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEV 233 + + S + + L+ EQ A I + + F LL G+TGSGKTEV Sbjct: 184 VEPVRIDRSPLIGEEYLLTKPKILSAEQQEAFTKIAHSLEAGIFQTHLLYGITGSGKTEV 243 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL +E L K A+++VPEI LT QTI RF+ RF + +LH L+ ER W K + Sbjct: 244 YLQAIEKALQMQKSAIMLVPEISLTAQTIERFKSRFPDNIAILHHRLSHGERFDEWHKIR 303 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPI 352 GEA IVIG RSA+F+P NLG++++DEEH+ SYKQQE YHARD+AV R Q + Sbjct: 304 RGEARIVIGARSAVFSPVPNLGLVIVDEEHEQSYKQQEESPCYHARDIAVMRGKIAQATV 363 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA----GLAPALI 408 +LGSATP++E+ N + KY L L +RA ++ ++D+K + +A + L+ Sbjct: 364 LLGSATPSIESYYNAIKGKYVLSLLKKRAESSLLPSVTIVDMKREFEKAKGFTNFSELLL 423 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + L Q ILFLNRRG+ L C C +CP C T + +++ L CH CD Sbjct: 424 NEIEKRLTTGEQTILFLNRRGYHTTLTCPSCQTAIKCPHCSLALTFYYSRNSLSCHLCDF 483 Query: 469 Q-RPVPRQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 P P CP+C T + G+GTE +E++L +FP + RID DTT KG+ ++ L Sbjct: 484 TISPPPSTCPNCKKDTPMKFQGVGTELIERSLHAIFPDIRTIRIDADTTKHKGSHQKLLR 543 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + G A +LIGTQM+AKG HF +VTLV +L+ D +L DFRS+E QL TQVAGRAG Sbjct: 544 DFGTGKADVLIGTQMIAKGLHFSEVTLVGVLNGDASLNIPDFRSSEIAFQLMTQVAGRAG 603 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R QG+V++QTH P++ +Q + Y AF E+ ++ R + PP++S V + N Sbjct: 604 RGITQGKVIIQTHIPDNSTIQLASQQNYTAFFEEEISSRELFNFPPFSSMVKLNFSGSNE 663 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQHII 705 + F Q R+ + ++ +++VL PV P+ K R+R+Q L++ PS I Sbjct: 664 KETLEFSQIFRSKLQTNL---PEIFVLSPVIPSGHAKVKDRFRFQFLVRGPSIYAANQAI 720 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 TL +K ++DV+P+ Sbjct: 721 KTTL---QRTSIPHGMKLLVDVNPL 742 >UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=32 Tax=Neisseriaceae RepID=A9M290_NEIM0 Length = 733 Score = 760 bits (1963), Expect = 0.0, Method: Composition-based stats. Identities = 276/736 (37%), Positives = 395/736 (53%), Gaps = 11/736 (1%) Query: 1 MPVAHVALPVPL-PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M +A+ VPL Y + + G RV VPF + + +G+V A ++ Sbjct: 5 MIYHRIAVNVPLSDGLLTYSHSDPLP--PGTRVLVPF-RNKTVVGMVWETDIAPDMDTAR 61 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + ++ EP S LL + + YYH+P G +F ALP L++ R ++ Sbjct: 62 ILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGLKETRAVEMPQPPLFY 121 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA-ALQALRKKGLCDLAS 178 A + L R K+ AL G + + + A ++ ++G + + Sbjct: 122 ALNEAGRAQTPPLARFNKKAALWDALLSGGMTMAALKQVNAQAAKLIEDWAEQGWIE-TT 180 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 E + N S LN +Q A AI +A F +LL G+TGSGKTEVY + Sbjct: 181 EAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPFLLYGITGSGKTEVYFDAM 240 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 VLAQG+Q L ++PEI LTPQ + R RF + P VLHS + +R +L+A G+A Sbjct: 241 AKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLHSQMAAGKRTQDYLRAMLGQA 300 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +VIGTR A+FTP ++G+IV+DEEHD S+KQ RYHARDLAV+RA PIILGSA Sbjct: 301 KLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQGGCPIILGSA 360 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNA-RPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 TP+LE+ Q YRLL+LT RA A + +L++ K+ G +P + ++Q+ + Sbjct: 361 TPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDILNVGRLKLDNGFSPQALQLLKQNFE 420 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A +++LNRRGFAPAL C DCG+ CP C LHQ LRCHHCD + P+P +C Sbjct: 421 AGGMSLVYLNRRGFAPALFCGDCGYTFGCPNCSAKMVLHQRVRQLRCHHCDHREPIPFKC 480 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P CG+ L VG GT+++E+TL P + R+DRD+T+ K + IL Sbjct: 481 PDCGNQDLTAVGHGTQRVEETLRAFLPKAAVVRVDRDSTAHKNDWADLYRRIADNEIDIL 540 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH F + LV +L+ DG+L+SADFR+ ER QV+GRAGRA K G+V++ Sbjct: 541 VGTQMLAKGHDFARLNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLI 600 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT PEHP+ + + Y FAE L ER+M +PP+ VRA+ A FL Sbjct: 601 QTQLPEHPVFAAVKAQDYVVFAENELNERQMFAMPPFGFQTAVRADAPRVADAMEFLNAA 660 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + + +PL E + G P L + R R QI L+ SR L ++ + ++ Sbjct: 661 KETL--APLLPESVSQFGAAPMLMVRLAERERAQIFLESTSRQDLHRAVSLWVQVLQQNR 718 Query: 717 DSRKVKWVLDVDPIEG 732 D K++W +DVDP E Sbjct: 719 DG-KIRWSVDVDPHEA 733 >UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=D1BMC0_VEIPT Length = 727 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 224/739 (30%), Positives = 361/739 (48%), Gaps = 21/739 (2%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M VA V + P L + YL+PE V G RV +P G +E GI++ + E P Sbjct: 1 MRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREE-GILIGYDELVEPP 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 L+ +V+VLDSEP FT + +YY GD L + + + AP Sbjct: 60 EFTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDALRLF---TVNKTLKSYEAPKE 116 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 W +V S ++ +++ A L G + + ++ ++ + + + Sbjct: 117 EWLVVMPEFSVAQFSERKKKQRELAKYLLEVGGASKALLLAKGYSRIVIKQVSEAKGIVV 176 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVTGSGKTEVY 234 + + L Q G I +A ++ +LL GVTGSGKT++Y Sbjct: 177 EARFKATKTTFDELLTEEVNIPLTEAQQAVYGPIQAAMNSHEHKTFLLHGVTGSGKTQLY 236 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++Q K A+++VPEI LT Q + RF E F V V HS L +R + W + + Sbjct: 237 LRATAKCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWERLRR 296 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 ++ I+IG RSA+F P +++G+IV+DEEHD SYKQ++ RYHAR++A++RA + P+IL Sbjct: 297 KDSHIIIGARSAVFAPAEDIGLIVVDEEHDPSYKQEDMVRYHARNVALWRAEAHGCPVIL 356 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 GSATP++ + +Q +Y LL L R ++D+K + + + A+ + Sbjct: 357 GSATPSVTSYYKAKQGEYHLLELPNRIFEQPMPKVTIVDMKEEILHGNYSVFSDAMSRLI 416 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 + L NQ+I+ LNRRG++ ++C DCG CP CD HQA LRCH+C+ P Sbjct: 417 QHTLDEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHHEP 476 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 +P CP C S + G GT+++E+ L F I+R+D+D T K E L + Sbjct: 477 IPTVCPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQLAEDILHDFGAH 536 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 IL+GTQM++KGH F DVT V +L D L + ++ER L TQ +GRAGR K Sbjct: 537 KYDILLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGRGEKP 596 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G VV+QT++P + + Y F + + R+ + PP+ + + + + Sbjct: 597 GSVVIQTYNPLNYAIIKSKAHDYIGFYNEEIKNRKALGYPPFREMIHMVVRHQDMKTLES 656 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 ++ + + S ++ + + GP A K +R I+++ L+ I + Sbjct: 657 IANRIVDDLESYK-GNQDILINGPYEAPIKKVRDMYRLAIMIRGTDLTNLKEYIYNSWIF 715 Query: 712 INTIPDSRKVKWVLDVDPI 730 ++DVDP+ Sbjct: 716 TQEG-------LLIDVDPV 727 >UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6 Tax=Betaproteobacteria RepID=Q5P4Q5_AZOSE Length = 723 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 289/732 (39%), Positives = 400/732 (54%), Gaps = 11/732 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + V+LPVPLP+ FDY + G VRVPFG+ E+ G++V+++D S + L Sbjct: 1 MRIVRVSLPVPLPQLFDYTSEDATEGDVGRCVRVPFGRG-EKSGVIVAIADDSAIEAARL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAV V L+ + A YYH P+G+V+ ALP LR+ ++ Sbjct: 60 KAVRHVQREVAPLPRDWLELVAFVARYYHAPLGEVIALALPPGLRRADAVSDREADPLLD 119 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 L +R + L L + R V + AL ++G T Sbjct: 120 VGDAGRAALAVPRRPSRALALLRDLVALGVVRHSVVRALPSGDALADALRRGWIVPVRRT 179 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 +GE +L EQ A+ A+ +A F WLL GVTGSGKTEVYL + Sbjct: 180 NPA-------DAAGELPQLTAEQGAAIDAVLAAGPGFVPWLLQGVTGSGKTEVYLRLAAR 232 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L G+Q L++VPEI LTPQ AR RF A V LHSGL R +++A G A I Sbjct: 233 TLEAGRQVLMLVPEIALTPQLEARVAGRFPSATVISLHSGLAPGARSRGFVQALEGRADI 292 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+GTR A+F LG+I++DEEHD+SYKQQEG RY ARD+AV+RA +PI+LGSATP Sbjct: 293 VLGTRLAVFAALPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRARQRDVPIVLGSATP 352 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE+ +V+ +YR LRL+ RA + +D + ++ GL+PAL + + L+ Sbjct: 353 SLESWQHVRVGRYRGLRLSVRAVASTLPAVRRIDTRRARLDEGLSPALQAAIGERLERGE 412 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q ++F+NRRG+AP L C C W++ CP C +H A LRCHHC +PR CP C Sbjct: 413 QSLVFINRRGYAPVLSCPSCSWVSPCPHCSANLVVHLADRRLRCHHCGCDSAIPRVCPVC 472 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 G+ + P G GT+++E L LFP + R+DRD+ + E LA + G A IL+GT Sbjct: 473 GNQDIQPFGRGTQRIEARLVELFPDARVLRVDRDSARTRKQWEAMLATIAAGEADILVGT 532 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGRA GEV++QT Sbjct: 533 QMMAKGHDFPRLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRAHLPGEVLIQTE 592 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 +PEHPL + L+ +DAFA +AL ERR PP+T ++RA+ A FL R L Sbjct: 593 YPEHPLYRCLVRHDFDAFAARALDERRQAGFPPFTHQAMLRADAPALDDAMKFLAHARRL 652 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 S A E L V VP + R R Q+L++ R LQ + + ++ R Sbjct: 653 AQDS--APEGLQVFDVVPMRMTRLARRERAQLLVEAGERALLQEFVGRWICVLRAQRLPR 710 Query: 720 KVKWVLDVDPIE 731 ++W LDVDP+E Sbjct: 711 DLRWQLDVDPLE 722 >UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS2_SYNAS Length = 809 Score = 757 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 273/811 (33%), Positives = 394/811 (48%), Gaps = 89/811 (10%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A+ +P F Y +P+ + G R VPFG ++ G ++ + + Sbjct: 4 YVKIAINIPTESHFTYSVPQALSGDAAVGKRALVPFGARK-LTGYIIGFLSEPDFDD--I 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR----PAANAPMW 116 + ++++LDSEP+F+ WA+ YYH+P+G L LP + A Sbjct: 61 RDILDILDSEPLFSSEDLAFYSWASSYYHYPLGKTLHDILPGGIDLKSDRLFKVAAGHKA 120 Query: 117 YWFATEQGQAVDLNSLKRSPKQ---------------QQALAALRQGK--IWRDQVATLE 159 +GQ L+ L +PK ++ LAAL I + + E Sbjct: 121 PSNPLPEGQRKILDLLGAAPKGLSLKRLRRLLSGSPIRRDLAALLSANRVIAEEGLEQPE 180 Query: 160 FNDAA-----------------------LQALRKK------------------------- 171 L L++K Sbjct: 181 IRKKTEKVITLVAGRSVPARLSAVQQRVLSYLQEKGTACFPELRPFACNPSPVVHRLMEK 240 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSG 229 GL L+ S + + LN +QA A G + SA + F +LL GVTGSG Sbjct: 241 GLVSLSEREVYRSSEESPEMSILNDIHLNDDQAAACGELESALSSRRFKPFLLHGVTGSG 300 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSA 288 KTEVY ++ L G AL +VPEIGLTPQ ++R R RF + V+HS + R Sbjct: 301 KTEVYFHAIKQALNSGGGALYLVPEIGLTPQLLSRVRNRFQGEEIAVIHSDIARGIRYDF 360 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + + GE +V+G RSALF P NL +IVIDEEHDSSYKQ RYHARDLAV RA + Sbjct: 361 WRRLQRGEIRLVVGARSALFAPLPNLRLIVIDEEHDSSYKQDVRMRYHARDLAVLRAKLQ 420 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LA 404 I+LGSATP + T +Q KY L L RR N ++D+K ++ + G L+ Sbjct: 421 NAVIVLGSATPDMRTFYQARQGKYDCLSLPRRVENRPLPQVRIVDMKAEREETGRIPVLS 480 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 ALIT + + L +Q + FLNRRGF L C DCG + CP C TLH + L+CH Sbjct: 481 RALITALEETLNDGSQALFFLNRRGFHTFLFCPDCGTVLFCPNCAVSLTLHAEANRLQCH 540 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +CD P CP CG + G GTE+LE+ + FP + +R+DRDTT+RKGA + Sbjct: 541 YCDYAVKTPSLCPKCGGRDIQFYGAGTERLEKEILSHFPHIRTARMDRDTTARKGAHTRI 600 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L RG +LIGTQM+ KGH F +VTLV ++ D AL DFRSAE+ QL TQV+GR Sbjct: 601 LKSFDRGEIDLLIGTQMITKGHDFHNVTLVGVIAADTALNLPDFRSAEKTFQLLTQVSGR 660 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 GR K+G+V++QT +P+H +Q Y F E+ + R+ + PP++ +I++ Sbjct: 661 GGRGRKEGQVIIQTINPDHFAIQRAKNHDYTGFHEEEILHRKSLGYPPFSRLIILQLSSL 720 Query: 645 NNQHAPLFLQQLRNLILSSPLADEK----LWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 N + +++ + + + + V+GP A K GR+RWQI+L+ + Sbjct: 721 NEERGRREVEEAGRMARAFTREESSRTMPVEVIGPAEAPIAKIKGRYRWQIMLKSDNLQA 780 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L + L T SRK++ +DVDP+ Sbjct: 781 LHFLTRRLL----TSAASRKLEIKVDVDPVN 807 >UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RII3_9MOLU Length = 736 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 232/741 (31%), Positives = 362/741 (48%), Gaps = 28/741 (3%) Query: 2 PVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVS-------D 51 + V + P L TFDYL + +G RV + FG Q+ IG V + Sbjct: 7 YIVQVLVEHPTHALDTTFDYL--ANTEIASGVRVTIAFGYQR-IIGYVTGCRYSNSTKEE 63 Query: 52 ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 + + + EV+D P+ + L L A P L LP L+ + Sbjct: 64 LETAAGFKYRYISEVIDERPLLNQELQELSLTLAKLTLSPRISCLQAMLPPQLKPSTNKS 123 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 + + L ++ KQQ+A L+ + ++ L L ++ Sbjct: 124 VGIKYQKVIKVINEDATL----KTVKQQEAYQYLKTHPDTP--LKAFPYSRGLLDKLIEQ 177 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 + E + D + L +Q V I S DT+ L+ GVTGSGKT Sbjct: 178 -RVTVIIEQELYRDPYLDDQKEEHEFSLTVDQQKVVNGIMSKIDTYHTALIHGVTGSGKT 236 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + + V+ K L++VPEI LTP + F+ +F V +LHS L+ ER + + Sbjct: 237 EVYLHLSKYVIRNNKTVLMLVPEISLTPMMVNAFKHKFGKEVAILHSKLSAGERYDEYRR 296 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 N E IV+G RSA+F P + +G+I++DEEHD SYKQ+ RY +A R P Sbjct: 297 ILNSEVKIVVGARSAVFAPLEKIGLIILDEEHDPSYKQESKPRYQTTQIARIRGQYHNCP 356 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALI 408 +ILGSATP+LE+ Q+ Y L L +R ++D+ + + A+ Sbjct: 357 VILGSATPSLESYSRGQKGIYDLYELPKRINQFPLPKIELIDMADEIRNKNYSLFSKAMK 416 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 +++ L D QVIL LN+RG+A + C DCG + +CP CD T H+A H LRCH+C+ Sbjct: 417 EQIQTCLDHDEQVILLLNKRGYATYVRCLDCGEVIKCPHCDVTLTYHKADHKLRCHYCEH 476 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 Q +PR CP C S L VG GT+++E+ L +F G + R D DTT +K ++ L + Sbjct: 477 QIEMPRLCPHCSSERLKLVGAGTQKVEEQLETIFDGAKVIRYDVDTTKQKDGHQKLLDKF 536 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 R IL+GTQM+AKG F +VT V +L+ D +L DFR+ ER QL QV+GR+GR Sbjct: 537 ARKEGNILLGTQMIAKGLDFENVTFVGVLNADISLNIPDFRANERTFQLLEQVSGRSGRG 596 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K+G V++QT++PEH +LQ + Y F ++ + R++ PP+ V + + + + Sbjct: 597 QKEGTVMIQTYNPEHFVLQCVKNHDYLRFYQEEMKTRKLAAYPPYVHLVSILIQGKDEEV 656 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 Q++ + +K+ +LGP +L + +R +I+++ + +L ++ Sbjct: 657 VNQSAVQIKEYLQKQL---DKMAILGPANSLIYRMQDIYRKRIMIKFTNSKQLYPVLEKM 713 Query: 709 LALINTIPDSRKVKWVLDVDP 729 N KV V D +P Sbjct: 714 SDFYN--KKGNKVHVVCDFNP 732 >UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (replication factor Y) n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B64 Length = 727 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 290/736 (39%), Positives = 427/736 (58%), Gaps = 21/736 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 + VAL VPL R FDYL G K G V+V FG + +G+V ++ S L ++LK Sbjct: 6 KILKVALDVPLDRLFDYLN-NGEAFKVGQYVKVSFGSR-VLMGVVCGFANDSLLAEDKLK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 ++ + E +F + + RLL ++ADYYHHPIG + +P ++Q + + AT Sbjct: 64 KIIHA-EPEVIFDNDLLRLLEFSADYYHHPIGQTILSIVPSRIKQHKYQLRIKEKVYKAT 122 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + + L + K + LAA G+ R + + + KK + DL Sbjct: 123 RELTPDWIELLPKRQKNLRKLAAHLLGQPIRQS------SLKNIASNAKKAILDLEIMGV 176 Query: 182 EFSD-WRTNYAVSGE-RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +S+ W + + + R LN EQ A+ ++ + F A LL GVTGSGKTEVYL ++ Sbjct: 177 CYSEEWVEDESHKIDMRPSLNEEQQLAINSVMNEKG-FLASLLYGVTGSGKTEVYLHLIA 235 Query: 240 NVLAQGK-QALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEA 297 N L + K Q LV+VPEI LTPQ +RFR RF + VLHS L+ ERL W +AK+G+A Sbjct: 236 NFLEEEKAQILVLVPEINLTPQLESRFRARFPDRNLVVLHSNLSSIERLDNWRQAKSGKA 295 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +I+IGTR A+FTPFKNL +I++DEEHDSS+KQQEG +YHARD+A+ RA + IPI+LG+A Sbjct: 296 SIIIGTRLAVFTPFKNLKLIIVDEEHDSSFKQQEGLKYHARDVAMVRARNNNIPIVLGTA 355 Query: 358 TPALETLCNVQQK--KYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 TP+LE+ N ++ KY+LLRL RA NA L K Q ++P ++ ++Q Sbjct: 356 TPSLESWLNASKEISKYQLLRLKDRAVLNASLPAIKTTPLNSDKDQL-ISPLILKAIKQR 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 + Q ++F+NRRG++P L+C CGW A C +C +H +RCHHC + P+ Sbjct: 415 VALKQQALIFINRRGYSPVLVCSSCGWSASCHQCSARLVVHLKDKKMRCHHCSYESPIAM 474 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QC CG+ L P+G GT+++E + L P I R+DRD+ +K AL + + RG Sbjct: 475 QCQDCGNPDLYPLGSGTQKIEDRIRALIPSASILRVDRDSMRKKNALNELYEKTSRGDID 534 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGH FP +TLV +LD D AL+S DFR++ER QV+GR+GR+ GEV Sbjct: 535 ILVGTQMLAKGHDFPKLTLVVVLDADNALYSTDFRASERLFSQLMQVSGRSGRSSIAGEV 594 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT P HP+ Q + Y+ FA LAER + LPP++ +++AE A F+ Sbjct: 595 LIQTSFPNHPIFQAVKTHNYELFANSILAERASIDLPPFSFQAVLQAESRTLSLAERFMD 654 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + ++S EK+ + GPV + + G R I +Q R LQ+++ + I Sbjct: 655 DIADWAINSK---EKVNIFGPVRPVMERVSGHERINIYIQSNERKHLQNMLKVWIDQIRQ 711 Query: 715 IPDSRKVKWVLDVDPI 730 P + +VKW +D+DP+ Sbjct: 712 HPLANRVKWSVDIDPM 727 >UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZW59_OPITP Length = 745 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 254/739 (34%), Positives = 370/739 (50%), Gaps = 27/739 (3%) Query: 13 PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 + Y +P+ M V+ G VRVP + R+GIV + + P+ +LKAVVEVL Sbjct: 12 DKLLHYKVPDPMRDAVQVGSLVRVPV-LRTMRLGIVGEIGVPKDFPVEKLKAVVEVLHPF 70 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P T + +L W A YY + V+ LP +R+G + + + Sbjct: 71 PALTPELLQLARWMAGYYACGVDSVIETMLPAAVRRGATVKHEKSLALVRRLTPDELTVL 130 Query: 131 SLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 K++P+Q + L Q + + ++ L A AL K+G E + Sbjct: 131 E-KKAPQQARLYRLLAQQFRPQLKSLVLSRLGVTAAVATALIKRGFVREELRRVERVAYA 189 Query: 188 TNYA----VSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVLENV 241 ++A V+ + LN EQA V + S F LL GVTGSGKTEVYL ++ Sbjct: 190 DDFAHGELVAAQPHTLNPEQAAVVADLESRLGEQKFGVALLHGVTGSGKTEVYLRGIDTT 249 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERF-----NAPVEVLHSGLNDSERLSAWLKAKNGE 296 L G L +VPE+ LTPQT+AR R R V HS L+D ER WL GE Sbjct: 250 LKAGGGVLFLVPEVALTPQTVARLRSRLEAIAPGHRCVVWHSHLSDGERFDGWLALATGE 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+G RSA+F P NL +I++DEEH+ +YKQ E RYH RD+AV RA +LGS Sbjct: 310 ARIVVGARSAVFAPVANLRLIIVDEEHEPAYKQDETPRYHGRDVAVMRAKLTGAFCVLGS 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGLAPALITRMR 412 ATP+LE+ N KYRLL LT+R N + V+DL+ + ++ L+ L+ M+ Sbjct: 370 ATPSLESFANALAGKYRLLTLTQRVDNRQLPNIDVVDLRIEAMKHRSLTALSDKLVNAMQ 429 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 + Q ILF+NRRG++ ++LC CG + ECP C T H+A LRCH C Q+ Sbjct: 430 ARFERREQTILFINRRGYSSSMLCTKCGHVEECPHCSIAMTYHRADEMLRCHLCGEQKAA 489 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P +CP CG+ + GLGT+++E+ + + P I R+D D ++K + L++ G Sbjct: 490 PARCPQCGAPDIRWRGLGTQRVEEAVRRVLPRARIERMDTDAMAKKNRFREVLSQFRAGK 549 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 +L+GTQM+ KG FP+VTLV L+D D ++ DFR+ ER QL QVAGRAGR + G Sbjct: 550 IDVLVGTQMIGKGLDFPNVTLVGLIDADMSMHIPDFRANERTFQLLVQVAGRAGRGDRAG 609 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 +VV+QT P+ +Q + FAE L R+ PP+ + N + F Sbjct: 610 DVVVQTFTPQAEAIQFSRRADFAGFAESELKLRKEFHYPPYRHLIHHLFRGPNPEKLKFF 669 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 +Q L+ + + + GP + K +RWQ+ + ++ L Sbjct: 670 AEQWARLVEKEL--GQIVELRGPSASPIEKIKDEYRWQLWYFT---HAVIKVVPALAKLR 724 Query: 713 NTIPDSRKVKWVLDVDPIE 731 + VLDVDP+ Sbjct: 725 AGFAWPDDITQVLDVDPVN 743 >UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepID=A9KMA0_CLOPH Length = 792 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 237/793 (29%), Positives = 377/793 (47%), Gaps = 63/793 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERI-GIVVSVSDASE 54 M A + + + L +T+ Y +P + A G V +PFG I G +V +SD + Sbjct: 1 MQYADIIVDISVENLDKTYQYSIPPALCADAVIGVPVTIPFGNGNRSISGFIVGLSDVPK 60 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 + +K+++ + D + L + + Y + D L +P+ + Sbjct: 61 IAPERIKSILGIKDKGLPIEGQMIALAAFVKEQYGGTMNDALKTVIPVKKSVKQIEKRIV 120 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKG 172 + A K+ + + L AL + + D V L + + +L++ G Sbjct: 121 SSAVSKEKLQDAYIEAEKKKHKAKARLLLALMNSEEIEFEDIVNKLNISRTTINSLKESG 180 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGK 230 + + SET + + + + LN EQ V + + +L+ G+TGSGK Sbjct: 181 IIQIESETK-YRNPIASKTTDSYSISLNYEQQEIVSKVLKDYEEGIRKTYLIHGITGSGK 239 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ +++ V+ G+Q ++++PEI LT QT+ RF +RF + +L+S ++ ER Sbjct: 240 TEVYMGIIDQVIQSGRQVIMLIPEIALTYQTVVRFYKRFGNRISILNSKMSAGERYDQIE 299 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +AKNG+ I+IG RSALFTPFK+LG+I+IDEEH++SYK + +YHAR++A+ R Sbjct: 300 RAKNGDIDIMIGPRSALFTPFKDLGLIIIDEEHETSYKSEMPPKYHAREVAIKRGELSNA 359 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---AGLAPAL 407 IILGSATP+LE ++ L LT+RA A+ + ++DLK + + + + L Sbjct: 360 SIILGSATPSLEAYKKAMDGEFELFHLTKRAKEAKVPMVSIVDLKEELKKKNKSIFSDLL 419 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + + L+ Q++LFLNRRG+A + C CG +CP CD T H + L+CH+C Sbjct: 420 RSLIEDRLRKKEQIMLFLNRRGYAGFVSCRSCGTAMKCPHCDISLTAH-STGVLKCHYCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + P P CP CGS ++ G GT+++E + FP + R+D DTT K + E+ L+ Sbjct: 479 YEIPTPNICPVCGSKYIAAFGTGTQKVEAMVLKEFPTARVLRMDADTTKNKLSYEEILSS 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G A ILIGTQM+ KGH F VTLV +L D +L++ D+R+AER QL Q AGRAGR Sbjct: 539 FANGEADILIGTQMIVKGHDFAGVTLVGILAADLSLYANDYRAAERTFQLLAQAAGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 GEVV+QT+ PEH + T + Y AF EQ + RR+M+ PP + + + + Sbjct: 599 GELIGEVVIQTYQPEHYAVTTAATEDYVAFYEQEMNYRRLMKYPPAAHIMAILIQSKEEE 658 Query: 648 HAPLFLQQLRNLIL---------------------------------------------- 661 L L + Sbjct: 659 VVILAADLLAGAVKEWLKAKVELINQDKPDEQNKFIEQGKFEFKEQDKFKEQGKIENYLE 718 Query: 662 --SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + ++GP PA K +R + L+ L + + I + Sbjct: 719 NNEQDDNKPNISIIGPAPAGIAKMNDIYRRVLYLKEEQYEYLVEVKDFLEQYITVSEYFK 778 Query: 720 KVKWVLDVDPIEG 732 K D DP+ Sbjct: 779 KCNVQFDFDPMNS 791 >UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRF0_9GAMM Length = 724 Score = 754 bits (1948), Expect = 0.0, Method: Composition-based stats. Identities = 327/729 (44%), Positives = 419/729 (57%), Gaps = 22/729 (3%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 VA+ PL +TF Y G RVRVPFG+ RIGIVV E LK + Sbjct: 16 LEVAVFAPLRQTFSYRCKTP-PPPTGTRVRVPFGRGH-RIGIVVGYGL--EPAGTTLKDI 71 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +LD EP+ T ++ LL + A YY HP+G+V ALP LL +GRP + + E Sbjct: 72 DAILDDEPLLTPALQSLLHFGASYYQHPLGEVWATALPALLCRGRPLTSGEAPRYACNEP 131 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 + + P+Q L LR+ Q A L +L +G Sbjct: 132 SPD---AATRLGPRQTALLQLLREAGPLGRQELPAALRPA-LPSLLARGWLRAEDAPAPV 187 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 D +++ L+ EQ AV A+ +A D FS +LL GVTGSGKTEVYL + L Sbjct: 188 LDLQSSPHA------LHPEQRDAVTALRAARD-FSVFLLDGVTGSGKTEVYLETARSHLE 240 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 G+Q L +VPEIGLTPQ + R R RF A V HSG ++++RL W A++G +++G Sbjct: 241 AGQQVLFLVPEIGLTPQLLERCRARFGSAVVASYHSGQSEAQRLRVWQGARSGRIRLIVG 300 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSALF P +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSATP+LE Sbjct: 301 TRSALFLPLARPALIVVDEEHDPSFKQQSGWLYSARDLAIRRAQLESIPIVLGSATPSLE 360 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 +L N KYR LRL +RA +L ++ + +QAGL+ L+ Q L+A +QV+ Sbjct: 361 SLHNAHIGKYRHLRLRQRATAMNLPPMTILPMRRRLLQAGLSVDLLQACTQTLEAGHQVL 420 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LFLNRRG+APALLCHDCG CPRC T H+ LRCHHC + P QCP C S Sbjct: 421 LFLNRRGYAPALLCHDCGSALFCPRCSAPMTWHRQAGRLRCHHCGHEEGHPHQCPQCASV 480 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L PVG GTEQLE L FPGVP+ RIDRD ++ G LE LA+VH G ILIGTQML Sbjct: 481 DLRPVGAGTEQLEDYLGQRFPGVPVLRIDRDCITQTGQLEAVLAQVHHSGPAILIGTQML 540 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGHHFP VTLV +++VD +LFSADFR+ ER AQ QVAGRAGR G +LQ+H PE Sbjct: 541 AKGHHFPRVTLVGIVNVDQSLFSADFRATERLAQTVLQVAGRAGRGSVPGRALLQSHVPE 600 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPLL L Y A A+ L ERR+ +LPP+ + ++RAE H FL S Sbjct: 601 HPLLALLQAGDYTAIAQHLLEERRVARLPPFRALALLRAEAHRLDRVQSFLAAAAERAPS 660 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 L + GP P+L +R G R ++ L+ R LQ + L + T P+SR+V+ Sbjct: 661 ------GLEISGPFPSLLERRAGFHRAELWLEAARRSELQRALKHWLPQLGTRPESRRVR 714 Query: 723 WVLDVDPIE 731 WV+DVDP+ Sbjct: 715 WVVDVDPLN 723 >UniRef50_UPI00016C01EC Primosomal protein N (replication factor Y) - superfamily II helicase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01EC Length = 745 Score = 753 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 241/741 (32%), Positives = 379/741 (51%), Gaps = 19/741 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGK-QQERIGIVVSVSDASELP--LNE 59 + + A + + F Y+LPE + G RV VPFG + IG ++++ ++ + Sbjct: 6 IINRATNKAIDKPFTYILPEHLNALVGSRVMVPFGPLNKLTIGYLINIVSDEQITNIDFK 65 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K V+EVLD EP+ ++ + +YY + LP + + A A + + Sbjct: 66 IKTVIEVLDEEPILNQEQLEMVKFLVEYYGSSYAAAISTLLPPIDKHDIKTAVATTEFLY 125 Query: 120 ATEQGQAV-----DLNSLKRSPKQQQALAALRQ--GKIWRDQVATLEFND-AALQALRKK 171 QA+ ++ K Q + L L Q G+I + TLE N +++ +L K Sbjct: 126 KAADDQAILQYLNKISHSKTFANQAKILNFLLQNDGQIVSELKNTLELNTNSSINSLLKL 185 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 L Y + L LN+EQ A I S +D + +LL GVTGSGKT Sbjct: 186 KLIKRVFWQVRVQHMPICYD---KFLPLNSEQQQAYDQISSCSD-HNTFLLEGVTGSGKT 241 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EV+L ++ + + +G+ +V+VPEI LT QT+ RF ERF + V + HS L +R +L+ Sbjct: 242 EVFLHLIRDAVERGESVIVLVPEIALTRQTVNRFTERFGSRVALTHSKLTPRKRREIYLQ 301 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 AK IVIG RSA+F P L +I+IDEEHD SYK +++A ++A+ R Q Sbjct: 302 AKIQNVQIVIGPRSAVFMPLPRLSLIIIDEEHDGSYKSDMVPKFNAIEIAIERMKHHQGK 361 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALI 408 +IL SATP+LE+ Y L+L +RA NA ++D++ + L+ L Sbjct: 362 LILASATPSLESYYQATLGIYEYLKLNQRAKNATMPTISIVDMREELAAGNTKILSRRLH 421 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + QV++ LNRRG + + C CG++A+C CD +T HQ L CHHC + Sbjct: 422 NAIVDTVTQGKQVMILLNRRGHSTFISCRSCGYVAKCAYCDQPFTYHQKNKLLICHHCLN 481 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 Q VP CP CGS ++ G GT+++E+ L F I+R+D DT S+K LE L + Sbjct: 482 QIQVPTTCPECGSKYMQFFGNGTQKIEEYLMMHFSHYGIARMDLDTVSKKNELETLLQDF 541 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 +G ++L+GTQM++KGH F +VTLV ++ D L+ DFR+AE+ QL TQ GR+GR Sbjct: 542 EKGATKLLVGTQMISKGHDFSNVTLVGIISADSLLYIPDFRAAEKTYQLITQTLGRSGRG 601 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 QG+V++QTH P++ +L + F + L R++M PP+ V + Q Sbjct: 602 ADQGKVIIQTHSPQNDVLINIQNGSQPQFYKSELITRKIMGYPPYNHLFSVMISSEDEQS 661 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 +++L + + +LGP A PK ++RW+I++ R L Sbjct: 662 VIQNIKKLFAY-YTHYNKKKLFRLLGPTAATMPKLANKFRWKIMIIGQPRDILLFYGRYC 720 Query: 709 LALINTIPDSRKVKWVLDVDP 729 + N +K+ + D+DP Sbjct: 721 IDKFNEYEKPKKINIIWDIDP 741 >UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNV0_9FIRM Length = 706 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 223/709 (31%), Positives = 369/709 (52%), Gaps = 11/709 (1%) Query: 30 CRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 V VPFGK + G V ++S + ++++K + ++ S + L W Y Sbjct: 1 MAVVVPFGKGNRKTKGYVTALSKTCDYDISKVKEIADISRSGVEIEAKLIALAAWMKSNY 60 Query: 89 HHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG 148 + L LPI ++ + + K + + +AAL Sbjct: 61 GGTMLQSLKTVLPIKEKENIKVKKRLRLLIDRETGEKQLHYYLEKNQKARARLMAALLDD 120 Query: 149 KIWRDQV--ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATA 206 + ++ L ++AL ++ + + SE + + + + + EQ A Sbjct: 121 PLLDYELVRKKLNITATVIRALEEQHVLAVESEQV-YRNPVHAENIQKKEIIYTQEQKRA 179 Query: 207 VGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIAR 264 + + +LL GVTGSGKTEVY+ ++++V+ +GKQA+V++PEI LT QT+ R Sbjct: 180 IMRFCKDYENGIRKTYLLHGVTGSGKTEVYMEMIQSVVDKGKQAIVLIPEIALTYQTVMR 239 Query: 265 FRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHD 324 F RF V V++S L+ ER ++AK GE ++IG RSALFTPF NLG+IVIDEEH+ Sbjct: 240 FYRRFKDRVSVMNSRLSAGERYDQMMRAKAGEVDVMIGPRSALFTPFPNLGLIVIDEEHE 299 Query: 325 SSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNA 384 +YK ++ RYHAR+ A+ RA +E ++LGSATP++E + + +Y L+ + R+ Sbjct: 300 PTYKSEQTPRYHARETALRRAQTEGASVVLGSATPSMEAMYRAKNGEYVLMEMKNRSKMQ 359 Query: 385 RPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 PA + +D++ + L+ L M++ L+ Q +LFLNRRG++ + C +CG Sbjct: 360 DPAEVYTVDMRKELKNGNRSILSEQLQRLMKERLEKKEQTMLFLNRRGYSGFVSCRECGH 419 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 + +CP CD ++H+ +RCH+C ++ + CP CGS H+ GT+Q+E+ + + Sbjct: 420 VIKCPHCDVSLSVHR-DGKMRCHYCGYEQTHVKICPECGSDHIGEFRAGTQQIEEIVKTV 478 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 FP + R+D DTT +K + E+ L+ A +L+GTQM+ KGH FP+VTLV +L D Sbjct: 479 FPQARVLRMDMDTTRQKDSHEKILSAFANEEADVLVGTQMIVKGHDFPNVTLVGILAADM 538 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 +L++ D+RS ER QL TQ GRAGR K+GE V+QT+ P+H + T + Y+AF E+ Sbjct: 539 SLYTDDYRSGERTFQLLTQAVGRAGRGDKKGEAVIQTYSPDHYAIATSAAQDYEAFYEEE 598 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAP 681 + R MM PP + + V + + L+ ++ + D + V+GP Sbjct: 599 IRYRTMMGYPPAENLLAVFISSADEALLETGCRYLKEYMIKAK-KDIEASVIGPASPGIE 657 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 K +R I ++ L + + T I K++ D +P+ Sbjct: 658 KINDVYRKVIYVKTADYHDLVVLKDRTEKYIEINSGFDKMRIQFDFNPM 706 >UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9F7_9BACT Length = 769 Score = 751 bits (1940), Expect = 0.0, Method: Composition-based stats. Identities = 260/760 (34%), Positives = 373/760 (49%), Gaps = 46/760 (6%) Query: 13 PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDAS------ELPLNELKAVV 64 + Y PE + + G VRVP R+GIV + + + P+ +LK + Sbjct: 13 DKLLHYRAPESLREQAQVGMLVRVPILNGL-RLGIVGEMLEIGEGGGGLDFPVEKLKTLS 71 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-------------RPAA 111 + P + +L W A YY P+ ++ LP +R P+ Sbjct: 72 AFVYPFPALPPDLLQLARWMAGYYAAPLDGIIETMLPAAVRHAAGLKYEKYLSLAAPPSP 131 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ---VATLEFNDAALQAL 168 P A R+P Q + LR + + ++ L AA AL Sbjct: 132 PPPPPATSAAPLDAEEFARLEHRAPAQAKLYRFLRDQFRPQKKSLVLSRLGITAAACNAL 191 Query: 169 RKKGLCDLASETPEF----SDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLL 222 K+GL + E DW T +V+ LN EQ TA A+ + AA F LL Sbjct: 192 VKRGLIREETRRVERVAYADDWATGESVAALPHNLNDEQQTAADALRASLAARQFGVTLL 251 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-----NAPVEVLH 277 GVTGSGKTEVYL + + LA G + +VPE+ LTPQT+AR R R V V H Sbjct: 252 HGVTGSGKTEVYLRAVHDALADGGGVVFLVPEVALTPQTVARLRGRLEAIAPGHNVVVWH 311 Query: 278 SGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHA 337 S L+D ER+ WL GEA +V+G RSA+F P +NL +IV+DEEH+ +YKQ E RYH Sbjct: 312 SHLSDGERMDGWLALATGEARVVVGARSAIFAPVRNLRLIVVDEEHEPAYKQDETPRYHG 371 Query: 338 RDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ 397 RD+AV RA +LGSATP+LET N + KY LLRLT+R + ++DL+ + Sbjct: 372 RDVAVMRAKLAGAHCLLGSATPSLETHANAKAGKYSLLRLTKRIDTRQLPHIEIVDLRIE 431 Query: 398 KVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 +Q L+ L+ M+ + Q ILFLNRRG++ A+ C CG + ECP C T Sbjct: 432 AMQNRGFTTLSKKLVNAMQARFERREQTILFLNRRGYSSAMQCRKCGHVEECPHCSVSLT 491 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPS--CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 H++ LRCH C Q+ P CP+ C + + G+GT+++E+ + + P I R+D Sbjct: 492 YHRSDETLRCHLCGYQKTAPLVCPNATCRAPDIRWRGMGTQRVEEAVRRVLPHARIERMD 551 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 DT +K Q L+E G +L+GTQM+ KG FP+VTLV L+D D ++ DFR+ Sbjct: 552 ADTMQKKNRFRQLLSEFRAGKIDLLVGTQMIGKGLDFPNVTLVGLVDADISMHIPDFRAN 611 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER QL QVAGRAGR + GEV++QT P+ +Q + YD FAE L R P Sbjct: 612 ERTFQLLVQVAGRAGRGDRAGEVIVQTFTPQAEAIQFSRHADYDGFAEAELKMRNAFGYP 671 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P + N + F +Q L+ A ++ + GP P K +R+Q+ Sbjct: 672 PARHLIHHLFRGPNPEKLQFFSEQWAKLVEKELGA--RVELRGPSPCPIEKIKDEYRYQL 729 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + + I+ L T ++ V+DVDP+ Sbjct: 730 W--YFTNANVSAIVADLARLRATFAWPEQLVQVIDVDPVN 767 >UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=Lactobacillales RepID=Q03FY4_PEDPA Length = 806 Score = 751 bits (1939), Expect = 0.0, Method: Composition-based stats. Identities = 256/803 (31%), Positives = 386/803 (48%), Gaps = 82/803 (10%) Query: 6 VALPVPLPRT---FDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASELPLNE 59 V + VP +T F Y+ + + +K G RV VPFGK + I G VV +E Sbjct: 7 VIVNVPALQTNTPFTYIANDAIKNDIKIGSRVIVPFGKSERPIQGFVVGEETTNEFEG-- 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK ++ VL+ EP+ + L W AD + L LP L++ Sbjct: 65 LKDIISVLEPEPLLNKELIELSEWLADQTYAFRVSCLNAMLPSLVKVNTKRFIKINETKI 124 Query: 120 ATE-------QGQAVDLNSLKRSPKQQQAL------------------------------ 142 E + Q DL + S QQ+ L Sbjct: 125 TMETVLALLGEEQVTDLKVNELSFSQQKQLNQWIKDEFVTLKYVTEDSAKKKMINWLWPT 184 Query: 143 ----AALRQGKIWRDQVATLEFNDAALQAL-RKKGLCDLASE------------------ 179 ++ K R ++ L KKG+ + Sbjct: 185 MDLSEYEQEQKKLRKNATKQVELLNIIKTLDVKKGISQASILNDYGVGRSTLNTAVKNGW 244 Query: 180 --TPEFSDWRTNYAVSGERLRLN----TEQATAVGAIHSAADTF--SAWLLAGVTGSGKT 231 +R + +L N EQ +A I A + L+ GVTGSGKT Sbjct: 245 LVRKAVEQYRDPFEGRQMQLDQNLALNEEQQSAYNLITQAIEDKNAKPILVEGVTGSGKT 304 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL ++ V+ +GK AL++VPEI LTP + R R RF V VLHSGL+D E+ W + Sbjct: 305 EVYLQSIQQVIKKGKTALLLVPEISLTPLMVKRVRARFGTQVAVLHSGLSDGEKFDEWRR 364 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 E +V+G RSA+F P +N+G+I+IDEEH +YKQ + RYHARD+A++RA + P Sbjct: 365 IVRNEVKVVVGARSAVFAPLRNIGIIIIDEEHSETYKQSDAPRYHARDVAIHRAKKFECP 424 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK---GQKVQAGLAPALI 408 ++LGSATP+LE+ V++ +Y +++ +RA V+D++ G + ++ Sbjct: 425 VVLGSATPSLESRSRVERGRYDFVKIQKRANQKALPNIQVIDMRQHLGDGYNENFSAPMV 484 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 +R + QV+L LNRRGF+ ++C CG++ CP CD T+H +RCH+C Sbjct: 485 EEIRHRILRKEQVVLMLNRRGFSSFVMCRTCGFVLTCPNCDVSLTMHMDSRTMRCHYCGH 544 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + +PR C +CGS + G GTE+++Q LA + P + R+D DTT RKGA E+ L Sbjct: 545 EEAIPRLCKNCGSDKIRFFGTGTEKVQQQLAEIIPEARVLRMDVDTTRRKGAHERLLERF 604 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 A IL+GTQM+AKG FPDVTLV +L+ D AL D R++ER QL TQVAGRAGRA Sbjct: 605 GNHEADILLGTQMIAKGLDFPDVTLVGVLNADTALELPDLRASERTFQLLTQVAGRAGRA 664 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K GEV++QT +P+H ++ + Y+ F + + R + + PP+ V+V D + + Sbjct: 665 DKTGEVLIQTFNPDHYAIRLAQKQDYEDFFYKEMYLRHLGKYPPYYYTVLVSVSDRDERQ 724 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 A ++ N+I P VLGP K ++ +QIL+++ +L + Sbjct: 725 ALKNAYEMLNII--QPQLSANAIVLGPTAKSISKIKQKYYYQILIKYQREPKLHRALLEV 782 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 L + + +D +P Sbjct: 783 LNKSQE-KFRQGTRISIDSEPQN 804 >UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacterium KB13 RepID=B6BVT9_9PROT Length = 725 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 278/733 (37%), Positives = 408/733 (55%), Gaps = 18/733 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 + VA+ VP+ FDY E V G V VPFG ++ IGIVV V + LPLN++K Sbjct: 7 QIIKVAIDVPVDDLFDYRCSEQ--VDVGQFVVVPFGSRK-LIGIVVEVDVNTTLPLNKIK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 V+ V D E +F +++L + A YY +PIG + A+P ++QG + + A+ Sbjct: 64 EVIRV-DEESLFNTELFKLFRFVASYYQYPIGQTIHTAVPSRIKQGVTRGKKKNYIFNAS 122 Query: 122 EQGQAVDLNSLKRSPKQQQALAA-LRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 ++ ++ K +A L + ++ T+ ++ L L T Sbjct: 123 NNLSYEVIHGFPKNQKNLIKIATQLLTQPMNEIELKTVSNWKKHIEYLINHDLVTQVEIT 182 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PE L LN+EQ+ V I F A+L+ G+TGSGKTEVY+ ++++ Sbjct: 183 PEAPQHSA-------PLILNSEQSEIVEQIKKTKG-FEAFLIHGITGSGKTEVYMHLIDS 234 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAAI 299 ++ Q LVMVPEI LTPQ RF+ RF+ + LHS L+ +RL W AK+GEA I Sbjct: 235 LIKNEGQVLVMVPEINLTPQLEDRFQSRFHTKKIVSLHSHLSQPDRLENWRLAKSGEAQI 294 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIGTR ++FTPFKNL I++DEEHD S+KQQ+ RYHARD+ + RA IP I GSATP Sbjct: 295 VIGTRLSVFTPFKNLTAIMMDEEHDMSFKQQDNLRYHARDVGMMRAKLLNIPFIAGSATP 354 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-GQKVQAGLAPALITRMRQHLQAD 418 ++E +K L + N + V +K Q + L+ L ++ L Sbjct: 355 SMEIWHRAVNEKKLKLLSLTKRANEDATLPRVDLIKTSQDLDEPLSTYLKDAIQHRLDQQ 414 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 QV++F+NRRGFAP L C CGW A+C RC +H+ + LRCHHCD QR + C Sbjct: 415 QQVLIFINRRGFAPVLFCSSCGWQADCNRCSSKLVVHKNKQQLRCHHCDYQRTIDSSCQE 474 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG+ L+ +G GT+++E+ LA LFP I R+DRDT K L+Q A++H IL+G Sbjct: 475 CGNVDLMTLGKGTQKIEEQLARLFPLARIKRVDRDTIKNKKDLDQLYADMHDQKLDILVG 534 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQML+KGH FP +TLV +LD D AL+S+DFR+ ER QVAGR+GRA +GEVV++T Sbjct: 535 TQMLSKGHDFPHLTLVGILDADHALYSSDFRAGERLFSQLVQVAGRSGRASIKGEVVIET 594 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + PEHPL + + + ++ FA++ L R+ + PP+ +++ E N ++ F+ Q Sbjct: 595 NFPEHPLYKKIQSQDFNGFAKEELQLRKELHFPPFVMQAMLKTESKNKKYLEAFVTQCFQ 654 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 + + P K+ PV + G R I +Q +R L H ++ + I+ + S Sbjct: 655 FMSNLP---SKVTCFPPVRPYLERLQGFERSHIYMQSNNRTELNHFLSELRSFISAMKIS 711 Query: 719 RKVKWVLDVDPIE 731 +VKWV+DVDP+E Sbjct: 712 SRVKWVIDVDPVE 724 >UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVR6_BACS4 Length = 809 Score = 749 bits (1934), Expect = 0.0, Method: Composition-based stats. Identities = 209/642 (32%), Positives = 348/642 (54%), Gaps = 10/642 (1%) Query: 96 LFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR---QGKIWR 152 L + P++ + + + ++ + + KQ++ + + Sbjct: 166 LLYIKPVVSSKETKKLRTVVKPNMTITELHSICESLPNNAKKQKELVQYFINHFETVTVV 225 Query: 153 DQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 D + + + + + L +K + ++ L L +Q A+ I + Sbjct: 226 DLIEKVPTSRSTISTLVEKEILIKEEVEMRRDPFKGREYKRTSALPLTEQQTVALSPIIN 285 Query: 213 AAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN 270 + +LL GVTGSGKTEVYL ++ L GK+A+++VPEI LTPQ + F++RF Sbjct: 286 TLENNKHETFLLRGVTGSGKTEVYLQAIDKALKLGKEAIMLVPEISLTPQMVTHFKQRFG 345 Query: 271 APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 + V VLHS L+ E+ W + ++ + + +G RSA+F PF+NLG+I+IDEEH++SYKQ+ Sbjct: 346 SEVAVLHSALSKGEKYDEWRRIRDKKVKVAVGARSAIFAPFENLGIIIIDEEHETSYKQE 405 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQH 390 E RYHARD+A+ R P+ILGSATP+LE+ ++ Y LL +T R N + + Sbjct: 406 EAPRYHARDVAIKRGEHYSCPVILGSATPSLESYARAKKSVYHLLTMTTRVNNVQMPSVN 465 Query: 391 VLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 ++D++ + + LI M ++ Q++LFLNRRG++ +LC DCG++AECP Sbjct: 466 IIDMREELRSGNRSMFSEPLIEAMINRIEKQEQIVLFLNRRGYSTFILCRDCGYVAECPH 525 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T H+ L+CH+C P CPSC + G GT+++E+ L + GV + Sbjct: 526 CDISLTYHRTNQTLQCHYCGHVETPPNVCPSCEGDSIRFFGSGTQKVEEELNKVLSGVRV 585 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+D DTT RKG+ E+ L + RG A +L+GTQM+AKG FP++TLV +L D L D Sbjct: 586 IRMDVDTTRRKGSHEELLNKFGRGEADVLLGTQMIAKGLDFPNITLVGVLAADSMLHIPD 645 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FRSAER QL TQV+GRAGR K+GEV++Q++ P+H +Q + + +F E+ + R+ Sbjct: 646 FRSAERTFQLLTQVSGRAGRHQKKGEVLIQSYTPDHYSIQDVKQHDFVSFFEKEMKIRKQ 705 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 PP+ +++ D + + +++ I SS +V GPV + P+ R+ Sbjct: 706 AGHPPYYYLILIHVSDTDLGNTVSVAEKISKFIKSS--VSPDTYVYGPVTSAIPRIKDRY 763 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 R+Q ++++ + ++ L + + + ++D +P Sbjct: 764 RYQCMIKYKVEPNITVVLQEVLKTYQSEMNKSDLSIMIDTNP 805 >UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC9_9BACT Length = 789 Score = 748 bits (1933), Expect = 0.0, Method: Composition-based stats. Identities = 242/791 (30%), Positives = 385/791 (48%), Gaps = 68/791 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + LP+ +P+ Y + G RV V + GI + + E Sbjct: 1 MHYYVIHLPLEIPKELIY--CSSAEIVEGARVIVNLSGRLW-TGICGAKTRPEEDKDIRY 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA---------- 110 KAV+EVLD+ PV + + +L W ADYYH +G LF LP L A Sbjct: 58 KAVIEVLDTVPVLSPELMKLGYWMADYYHCSVGKALFAMLPARLLPEMEANVIWLSENVP 117 Query: 111 -----------------------ANAPMWYWFATEQGQAVDLNSLKRSP----------- 136 + E+G+ + L ++R Sbjct: 118 EPFIPLKKAIDKSENPVLKTLRKELTSYPLYKRIEEGEELGLLKIERRLNHKDKPRTVNF 177 Query: 137 ---------------KQQQALAALRQG-KIWRDQVATLEFNDAALQALRKKGLCDLASET 180 KQ++A +++ + + + +A++AL KKG + Sbjct: 178 IIRLQPTLEEDTLPLKQREAWEKIKEEEPSFPMSNISSTISYSAIKALVKKGFIKIEPRR 237 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 E + +++ LN Q A+ I TF+ LL G+TGSGKTEVY+ ++ + Sbjct: 238 FEPESVSFENSSPLKQITLNYAQVEAIKDITEGFGTFNVNLLYGITGSGKTEVYIELIRH 297 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L+ K + ++PEI LTPQ + RF+ F + + HS L + +RL W K K+GE IV Sbjct: 298 YLSVNKTVIFLIPEIALTPQMVDRFQSNFGQILAIQHSQLTEKDRLIQWQKIKSGEKRIV 357 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSA+F P +LG+I++DEEH+ +YKQ+ RY RDLA+ RA + +ILGSATPA Sbjct: 358 IGARSAVFAPLPDLGLIIVDEEHEGTYKQESAPRYQGRDLAIVRAQIQNAQVILGSATPA 417 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE+ N Q KY+L ++ R + V+DL+ + + ++ L+ + + LQ Q Sbjct: 418 LESWHNAQNGKYKLQKIESRPLDYCLPDVQVVDLRDEYEHSLISAPLLEAIDKRLQRKEQ 477 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILF NRRG++ + C CG + C C+ + H+ + ++CH+C + P PR+CP CG Sbjct: 478 VILFQNRRGYSSFMQCLKCGKLITCKNCEISMSYHRDREEMQCHYCGNTIPSPRKCPYCG 537 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S GT+++EQ L LFP I R+D D+ ++ + + IL+GTQ Sbjct: 538 SYSFAYGAPGTQKIEQNLKILFPEAKILRMDSDSARKRDTYKSMYNRMKNKEVDILLGTQ 597 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 M++KG FP VTLV ++ D +L DFR+AER QL TQVAGR+GR K GEV++QT++ Sbjct: 598 MISKGLDFPLVTLVGIVMADISLNLPDFRAAERTFQLLTQVAGRSGRRDKAGEVIIQTYN 657 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN-- 658 PEH +++ + Y FA + L R+ + PP+ + + + + + +R Sbjct: 658 PEHYAIESASQQNYIRFATEELGYRKKLYYPPYYRLARILFQSTDLETLKKEMSNMREVL 717 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 +L + +L +LGP A K +R+ ++ + + LQ+ I +L N Sbjct: 718 YLLRKQIPMPQLLLLGPSVAPFSKISSYYRYHLIFKAQTVKILQNAIRLFNSLYNC---P 774 Query: 719 RKVKWVLDVDP 729 ++ +D+DP Sbjct: 775 SNIRKQIDIDP 785 >UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ1_9GAMM Length = 731 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 310/739 (41%), Positives = 406/739 (54%), Gaps = 20/739 (2%) Query: 1 MP---VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP +A VAL PL R FDY +PE ++ G RVRVPFG+ E IGIVV++++ S++P Sbjct: 1 MPETGIAQVALDRPLDRLFDYRIPEDTDLRPGQRVRVPFGRG-EAIGIVVALANQSDVPE 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA-NAPMW 116 N+L+ + D++P+ T V LL + A YYHHP+G+ L ALP LR+G P AP Sbjct: 60 NKLREALGSPDAQPILTPMVLELLRFGARYYHHPLGEALLSALPPALRRGHPLPILAPEP 119 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV-----ATLEFNDAALQALRKK 171 W T G R +Q L AL D+ A L+ L+ L + Sbjct: 120 LWRLTAAGHRALAEGQVRGRRQLAILRALPALGAALDRTTLSTAAALQITAKDLRQLEAR 179 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G + P T G L EQ A+ A+ D LL GVTGSGKT Sbjct: 180 GWLEQTRADPLAPAPPT-----GTGYTLTPEQEAAIAAVSP--DDPRPMLLEGVTGSGKT 232 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + + +A+G+Q L ++PEI LTPQ R ++RF V +LHSGL + ERL AW Sbjct: 233 EVYLRMAADAVARGRQVLFLIPEIALTPQLAGRIQQRFPGQVALLHSGLAEGERLRAWEA 292 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 A+ GE IV+GTRSALF P G+I++DEEHDS++KQQ+G+RY ARDLA+ R E P Sbjct: 293 ARQGERRIVVGTRSALFVPLPEPGLIIVDEEHDSAFKQQDGFRYSARDLAIKRGQLEHTP 352 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 ++LGSATP LETL +Q +Y + L R +P +D + GL L+ M Sbjct: 353 VVLGSATPTLETLHAARQGRYTHVHLRSRPDGTQPPSVETIDTRVHSPDEGLTAPLLDAM 412 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +Q L A Q + LNRRGFA L C CGW+A+CP CD + T+H CH C Q Sbjct: 413 QQTLAAGAQCFVLLNRRGFARVLACESCGWVADCPDCDAHLTVHTQDRRAICHLCGHQER 472 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 +CP CG L+ GLGT++LEQ LA FP PI R+DRD+ KGALE L + + Sbjct: 473 RAERCPECGEA-LINRGLGTQRLEQALARHFPQTPIIRLDRDSVRHKGALETALDRIRQL 531 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A I++GTQMLAKGH FP V LV ++DVD LFS D R+ E QL Q AGRAGR Sbjct: 532 DAAIVVGTQMLAKGHDFPRVGLVGVIDVDQGLFSVDLRATEHTLQLIVQAAGRAGRGDGG 591 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V+LQT HP+HPL++ L Y A E LAER LPP+ +VR E A Sbjct: 592 GRVLLQTGHPDHPLMRGLDAGNYPAMLEPLLAEREAAGLPPYGHLALVRVEAAEAAAAHR 651 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 + + +L++ D L VLGP PA + R+R QILL+ R L + Sbjct: 652 HAETIAGHLLAARHGD--LRVLGPAPAPRHRVNRRFREQILLRAAERQALHRTLTQARHA 709 Query: 712 INTIPDSRKVKWVLDVDPI 730 T R V+ +DVDP+ Sbjct: 710 WQTEDLPRGVRIAIDVDPV 728 >UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LE29_MAGSM Length = 738 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 287/748 (38%), Positives = 401/748 (53%), Gaps = 36/748 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A VAL +F Y +P + G V VP G R G+V + S + EL Sbjct: 2 YALVALTGARDASFSYKIPAELADGCHPGYLVLVPVG-NSLRTGVVWACSATPQWCEGEL 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + EVL E + + +LL W YYH P G V+ ALP LR R W Sbjct: 61 KEIEEVLSDESLLDDELRQLLNWMIRYYHQPAGAVITAALPGHLRYDR----KQRIRWNP 116 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN------DAALQALRKKGLC 174 A D +L + P QA+A Q + TL N L+ L G Sbjct: 117 -----AADPTTLAQQPAALQAIATALQKRSNGLTEETLARNHGRRGLSRRLKQLEMAGYI 171 Query: 175 DLAS-----ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTG 227 T + V LN +Q AVG + +A + F+A+LL GVTG Sbjct: 172 LTEQSWNARHTATEAAESPTSRVMQAAPPLNEQQQQAVGQLVAALEAQHFAAFLLDGVTG 231 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVY +E+ LAQG+QAL++VPEI LTPQ I R+ RF+ + V HS ++ + R Sbjct: 232 SGKTEVYFRGVEHCLAQGRQALLLVPEIALTPQLIQRYEARFHENLAVFHSEMSAARRYR 291 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W +AK+G A +VIG RSALF PF LG+IV+DEEH+ SYKQ+EG Y+ARD+AV RA Sbjct: 292 DWQRAKSGAARVVIGARSALFAPFAKLGLIVVDEEHEGSYKQEEGVPYNARDMAVVRARM 351 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL---- 403 Q ++LGSATP++E+L N QQ +Y L LT+RA V++L +K GL Sbjct: 352 NQAVLVLGSATPSMESLYNAQQGRYHHLHLTQRATGVALPPVQVINLADKKNLQGLPFGT 411 Query: 404 --APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L M+Q QA Q +LFLNRRGFAPA+LC+ CG CP C TLH+ L Sbjct: 412 LLSHPLRQAMQQVWQAGKQSLLFLNRRGFAPAILCNLCGITVSCPNCSVALTLHKGAAKL 471 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH+CD + VP CP+C L+ G GTE+L+ + FP ++R+DRD ++ GA+ Sbjct: 472 VCHYCDHVQGVPDLCPNCKQLGLIQFGPGTERLQLEVESCFPEARVARLDRDAVAQSGAM 531 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ L + H G IL+GTQM+AKGHHFP +TLV ++ + L DFR+AER QL TQV Sbjct: 532 ERILKQFHEGQIDILVGTQMVAKGHHFPRLTLVGVVLAETTLSMPDFRAAERTFQLITQV 591 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGR + G+V +Q+ P H +Q + D FA+ R+++ PP+ ++R Sbjct: 592 AGRAGREAEVGQVYVQSFDPAHYAIQAAMAHDADRFADAEFGFRQLVGYPPFKRMAVLRF 651 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 N Q F+ +LR L+ P + VLGP PA K R+RWQ++++ + + Sbjct: 652 STPNVQEGGHFIHELRRLVPDQP----GVVVLGPAPAPLFKLRNRFRWQLMIKAETVQGV 707 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDP 729 +++ L + + RK++ +D+DP Sbjct: 708 HAMVSQLLQIAQPM-AGRKIRVDVDIDP 734 >UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTS9_METML Length = 752 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 312/753 (41%), Positives = 428/753 (56%), Gaps = 28/753 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 P+ +AL VPL R FDYL G V+ G RV VPFG++ + IGIV+ +D+SE + +LK Sbjct: 4 PILQIALDVPLARLFDYL-SAGQQVQVGQRVLVPFGRRNQ-IGIVMDEADSSEFAIEKLK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + + E V L+ ++ADYYH+P G L ALP LRQ PA + + T Sbjct: 62 PITQAFSDEVPLDAEVLSLIRFSADYYHYPFGQALLAALPARLRQVAPAVARKQYCYQIT 121 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + G+ VDL SL + + + + Q + + + + +A +A ++ A+ Sbjct: 122 DAGRQVDLESLPKRQRVLRLVLQALQAEGEQTEAVLDALSGSARKAAKELVNLGYATAEQ 181 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + R + + LN EQA AV +I F AWLL G+TGSGKTEVY+ ++++V Sbjct: 182 VLAVKRVPAILQTPQPALNAEQAAAVTSITQEIQVFKAWLLHGITGSGKTEVYIRLMQHV 241 Query: 242 LAQGK--------QALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKA 292 L QG Q LV+VPEI LTPQ ARFR R + LHS L++SERL W A Sbjct: 242 LQQGADGAAQQSAQVLVLVPEINLTPQLEARFRTRLPQYNLVSLHSSLSESERLHNWQLA 301 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 ++G A I+IGTR ++FTP NL +I+IDEEHDSSYKQQ+ RYHARD+A+ RA IP+ Sbjct: 302 QSGAAQIIIGTRLSIFTPIPNLKLILIDEEHDSSYKQQDSMRYHARDVALVRAKRLNIPV 361 Query: 353 ILGSATPALETLCNV-------------QQKKYRLLRLTRRA-GNARPAIQHVLDLKGQK 398 ++GSATPALE+ N Q KY LL L +RA A+ +D Sbjct: 362 VMGSATPALESWYNAMGSNGQATSAASSQPNKYGLLTLKQRAVSAAQLPKIDCIDTTKVN 421 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 +Q GL P L+ +R L+ Q +LF+NRRG++P LLC C WIA C RC +H Q Sbjct: 422 LQHGLTPQLVAALRLRLERKEQSLLFINRRGYSPVLLCTACHWIAPCTRCSSRLVVHLGQ 481 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 LRCHHC ++ +P QCPSCG L P G GT++LEQTLA L P I+R+DRD+ SRK Sbjct: 482 KKLRCHHCGHEQRIPHQCPSCGDADLHPTGHGTQRLEQTLATLLPTARIARVDRDSISRK 541 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 AL + L VH IL+GTQMLAKGH FP++TLV ++D D AL S DFR++ER Sbjct: 542 HALVEILDRVHNQEIDILVGTQMLAKGHDFPNLTLVGVIDTDSALHSPDFRASERLFAQL 601 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QVAGRAGRA K G+V++QT PEH L L + Y ++A L ER +Q PP+ + Sbjct: 602 MQVAGRAGRADKAGQVIIQTAFPEHALFNALRSQDYASYANDLLQEREQVQFPPYVFTAL 661 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 +RAE H+ FLQ S+ +++ PV + G R IL+ R Sbjct: 662 LRAEAHDFPLVQQFLQLA---FSSARALSQQVVTYDPVRPQMERLKGMERGYILMHAQQR 718 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 LQ ++ + + P + KV+W +DV+P+E Sbjct: 719 PALQKLLTQLVHQLRAAPIAAKVRWAVDVNPLE 751 >UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC17_CARHZ Length = 718 Score = 744 bits (1921), Expect = 0.0, Method: Composition-based stats. Identities = 228/735 (31%), Positives = 364/735 (49%), Gaps = 32/735 (4%) Query: 3 VAHVALPVP---LPRTFDYLLPEG--MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A VAL P L R + Y LP V G +V+ F + E G + S+ + Sbjct: 4 YAQVALLRPSRHLDRLYTYKLPSSDIKKVAIGAKVKFNFNNRLEE-GFIFSLGQEKDFS- 61 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 E+K ++EVL E T + ++ W ++YY I + L + + ++ Sbjct: 62 GEIKPILEVLPEELWLTPELVEMVKWISEYYLCSITEALTLI----SFPEKIYQDVEVFC 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 E + KR + ++ L+ + L + ++ L K+G+ + Sbjct: 118 TVVDETKLKEKIKKSKRLQNDEMVISLLKDKR-------GLVRTTSTIKKLVKQGILQIR 170 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + + L Q I LL G+TGSGKTE+YL + Sbjct: 171 EKPLP----------NLPPIELTESQKQVYQQIKRDMPKNFVGLLHGITGSGKTEIYLKL 220 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + L GKQ L ++PEIG+T Q +AR ++ F V HS L+ E+ + W + K G Sbjct: 221 AGDFLNHGKQVLFLLPEIGITTQMVARVKKYFPENTLVYHSRLSAREKFTVWRELKKGSP 280 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +V+GTRSA F PF+NLG+I++DEEH+ SYKQ+E +YH R++ +RA IP++LG+A Sbjct: 281 VLVLGTRSAAFLPFQNLGLIILDEEHELSYKQEETPKYHVREVVYWRAKRLGIPLLLGTA 340 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQH 414 TP++ET V + L +R N ++D+ + + ++ L ++ + Sbjct: 341 TPSMETYAAVISGLIKYYFLGKRYQNRPYPQVIIVDMFKEAKEGNTGIISSVLQKKISER 400 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 LQ QV LFLNRRGFAP ++C CG+ CP CD T H+ + + +CH+C + R Sbjct: 401 LQKGEQVFLFLNRRGFAPMIMCRKCGYFYRCPDCDVSMTYHKEEKNFQCHYCGKKIAFTR 460 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 +CP+C L G GT+++E+ L LFP I R+D DT K + ++ L + A Sbjct: 461 KCPACQEISLDLYGYGTQRVEEELKKLFP-AKIFRVDYDTMRSKNSYDKILEAIKNKEAD 519 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 I+IGTQMLAKG FPD+TLV +L+ D +L DFR+ ER L TQVAGRAGR GEV Sbjct: 520 IIIGTQMLAKGFDFPDLTLVGVLNADQSLNLPDFRAGERSFNLLTQVAGRAGRGLVPGEV 579 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT +PE+ ++Q + + +A + L+ R+ PP++ + + Q Sbjct: 580 IIQTFNPENYIIQAVQRGNFQQYALKELSLRKQTGYPPFSKIFRLIIAGEDEQKVIEGAN 639 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 L NL+ ++ ++ ++GP A K +R+ ILL+ + ++ L Sbjct: 640 NLVNLLKNASKFSPEIEIIGPAAAPFYKLKRNFRYHILLKTNKSSFAREVLKAGLQEFKK 699 Query: 715 IPDSRKVKWVLDVDP 729 + K+ VLD+ P Sbjct: 700 SSLNHKLTLVLDLSP 714 >UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6V7_GEMAT Length = 767 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 270/760 (35%), Positives = 376/760 (49%), Gaps = 36/760 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 VAL VPL RTF Y +P G+ V G RV VPF + + IGI + A E Sbjct: 10 RCIEVALAVPLFRTFTYTVPAGIAWPVAVGSRVLVPF-RNRAEIGICLGPGTAPE--GVR 66 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR---PAANAPMW 116 LK +V V+DSEP + W AD+Y PIG L LP LL Q + P A Sbjct: 67 LKPIVSVVDSEPSLPGPLIDTAQWIADWYAAPIGLTLRGMLPTLLLQTKTPTPRAKTQRV 126 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK----IWRDQVATLEFNDAALQALRKKG 172 E + +QQ+ + L + + + + A+ K+G Sbjct: 127 VRVVQELPSLLQREQTFARARQQRVVYDLLEAQGGVAPVDALLVQANCTAGVIVAMVKRG 186 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 + ++ E E + N A + Q A+ AI A D +LL G+TGSGKT Sbjct: 187 IVEVKQEVVERDPF-ANRAGVAPPPEPSASQRAAIAAIL-AGDPGQVFLLHGITGSGKTL 244 Query: 233 VYLSVLENVLAQ-GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 VY+ VL VL Q G+ A+V+VPEI LT QT+ RFR F V VLHS L+D ERL AW Sbjct: 245 VYIEVLRAVLQQPGRTAIVLVPEIALTSQTVDRFRGAFGDSVAVLHSALSDGERLDAWQS 304 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GE I +G RSALF P + +GV+++DEEH+ SYKQ E RYHAR+ A+ RA +E Sbjct: 305 LRRGERRIAVGARSALFAPLERVGVVIVDEEHEGSYKQAETPRYHAREAAIVRARAEGAL 364 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG--------------- 396 ++LGSATP+LE+ + + L L RAG A ++D++ Sbjct: 365 VVLGSATPSLESWERANRGQATRLTLPDRAGGASLPPVQLVDMRAVTKIERAGRAPHAPY 424 Query: 397 QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 + L+PAL+ + + Q +L LNRRG+A L CH CG + CP C T H+ Sbjct: 425 DPMLGVLSPALLKAIESRMVRGEQTLLLLNRRGYAAYLQCHACGDVQVCPHCSISLTYHR 484 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 L CH+C Q VP C CG+ + G+GT+Q+E+ +A FP I+R+D DTTS Sbjct: 485 VPEALICHYCQYQAVVPTHCAHCGTESIRRRGMGTQQVERLVAERFPEARIARMDVDTTS 544 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 K A Q L V RG IL+GTQM+AKG FP+VTLV ++D D L DFR++ER Q Sbjct: 545 GKWAHTQILDRVGRGEVDILLGTQMIAKGLDFPNVTLVGVVDADTGLNLPDFRASERTFQ 604 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L +QVAGRAGR K GEV++QT P+ ++ L Y F ++ L R++ PP+ Sbjct: 605 LLSQVAGRAGRGPKGGEVIVQTRMPDAHAVRHALTHDYLGFVQEELEARQVPAYPPFVGI 664 Query: 637 VIVRAEDHNN--QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 V + + L A + ++GP P + RWRW L++ Sbjct: 665 ANVVVSGTHQHLVAEAAIAAAVWVRALLERHAIAGVSIVGPAPCPIDRIKDRWRWHFLVK 724 Query: 695 HPSRVRLQHIINGTLALI----NTIPDSRKVKWVLDVDPI 730 L + + + V+ V+D DP+ Sbjct: 725 TAQPRLLTRLARYVAERAPVGTDAAHRTADVRLVVDRDPV 764 >UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F6_9FIRM Length = 722 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 243/741 (32%), Positives = 365/741 (49%), Gaps = 33/741 (4%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD------ 51 M +A V + P L + F Y + + G RV V F +Q +G V +V++ Sbjct: 1 MRIAKVWIEHPVLQLDQVFSYDA-LQLPAEKGKRVSVDFNGRQ-IVGFVDAVTEVDDGQP 58 Query: 52 ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 +++ LK ++ VLD + T ++ L W A+ P+ LP L+ Sbjct: 59 ETQVNGRPLKPLLSVLDENALITPELFELAKWMAEDTLSPVISCFQAMLPSKLKPKSSNQ 118 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 M + +P+Q++ LA LR + + A + L K Sbjct: 119 KIKMEQIAVYVGEHPL------LTPRQKEVLAWLRTEGPTV-LAKWRKQSPAITRTLEKL 171 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G L S T + + + + A + L LN +Q V I ++ LL GVTGSGKT Sbjct: 172 GCVRLDSRTVKAREEQADQAEAF--LPLNADQKRVVQEIQTSTQ--DVILLHGVTGSGKT 227 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + VL G+Q L++VPEI LTPQ +AR + RF V + HS LN+ ++ + + Sbjct: 228 EVYLHLARQVLDAGQQVLILVPEISLTPQMVARVKGRFQNDVAIYHSALNNQQKYEQYCR 287 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 +A+IV+GTRSA+F PF +LG+I++DEEHDSSYKQ +YH RD+A++RA Sbjct: 288 VFEKQASIVVGTRSAVFMPFDHLGLIILDEEHDSSYKQDSLPQYHCRDIAIHRARHFGCK 347 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ--KVQAGLAPALIT 409 +ILGSATP+LE+ + Y L L R P + V+D+K Q L+ L Sbjct: 348 VILGSATPSLESYARALKGVYGLAELKERVNRQLP-VCTVVDMKNQNRAQSGILSDVLRQ 406 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ ++ Q IL LNRRG++P + C CG +CP CD + H++ ++CH C S+ Sbjct: 407 KIADRIKRGEQAILLLNRRGYSPLIKCGQCGETLQCPHCDVALSYHKSIQKMKCHLCGSE 466 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 P+ CP CGS G GT++LE+ + LFP + R+D DTTSRK A ++ L + Sbjct: 467 FPLVTVCPKCGSRTFAAPGYGTQKLEEEVTRLFPQARVLRMDADTTSRKEAHQKLLEQFG 526 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 R A IL+GTQM+AKG FP VTLV +L+ D DFRS E L Q AGR+GR+ Sbjct: 527 RHEADILVGTQMIAKGLDFPQVTLVGILNADAGTARPDFRSVEMTFDLIMQAAGRSGRSQ 586 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEVV+Q P H + + Y +F Q + R + PP+T + + D Sbjct: 587 TPGEVVIQAFDPNHFAVVAGSRQDYQSFFYQEMQYRHLGGYPPYTYLIALTFSDVRPDRP 646 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q + + S L VLGP K R+R +++L+ +++ + L Sbjct: 647 KQSAQVVAQALRQSSL----FKVLGPSD--LFKLQDRYRSRLVLKGKDLDQMKTALAQVL 700 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 +DV+P+ Sbjct: 701 QEYRRQRSQAH--LSIDVNPL 719 >UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R7_ABIDE Length = 741 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 239/740 (32%), Positives = 367/740 (49%), Gaps = 17/740 (2%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVK---AGCRVRVPFG-KQQERIGIVVSVSDASEL 55 A V + + L +TF Y +PE + G V VPFG +E VV + + +E+ Sbjct: 2 YAEVVIGISVDKLDKTFCYRVPEHLGDAENLIGAEVIVPFGMGNRETKAYVVEIKEDTEV 61 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + +K ++ ++ + L W + Y + + L L + A Sbjct: 62 DKHLIKDILMKSENSVNIETKLIELACWLKNNYGGSMNEALRSVLQAPKKVNHIKARTVS 121 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA-ALQALRKKGLC 174 E + + K+ + + LA +G+ + E + A A ++L K G+ Sbjct: 122 LLTDRDEAAEKLKEFERKKYSLKTKILAKAIEGEFSYENFIKNEKSAASAFKSLVKDGII 181 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTE 232 ++ E + + +G+ L EQ AV + + + +LL G+TGSGKTE Sbjct: 182 EIKEELLYRKPVKISDKNTGKA-ELGEEQKRAVDKVVNDYKSGIMGRYLLFGITGSGKTE 240 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VY+ ++E V+ G+Q + ++PEI L+ Q + R RF + V++S ++ ER +L+A Sbjct: 241 VYMEIMEEVIRSGRQVIFLIPEIALSFQMVERLSARFGERISVMNSKMSQGERYDQYLRA 300 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 KNG+ I++G RSALFTPF NLG+I++DEEH+ SYK + RYHAR+ A+YRA E + Sbjct: 301 KNGDIDIIVGPRSALFTPFSNLGLIIVDEEHEGSYKSSKTPRYHARETALYRAGKENAAV 360 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 ILGSATP+LE + KK +L LT R A V+DL+ + ++ L Sbjct: 361 ILGSATPSLEAVKLASDKKIEVLMLTERPAGALLPEIEVVDLREELRAGNKSIISKKLSE 420 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ L Q ILF+NRRG+A + C CG +CP CD T H+ L CH+C + Sbjct: 421 LIKDRLAKKEQTILFINRRGYAGFVSCRSCGEAVKCPHCDVSLTFHRPD-RLICHYCGYE 479 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P +CP C S ++ GLGTE++E+ + FP + R+D DTT+ K E + + Sbjct: 480 EKMPDKCPKCESPYISTFGLGTEKVEEIVKNDFPVARVLRMDGDTTTGKYGHEAIIEKFK 539 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 +G A ILIGTQM+ KGH F VTLV +L D +LF DFR+AE +L Q AGRAGR Sbjct: 540 KGEADILIGTQMIVKGHDFEKVTLVGILAADLSLFLGDFRAAETTYELLVQAAGRAGRGR 599 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 +GEVV+QT+ PEH +Q+ Y F + + R++ + PP + + + Sbjct: 600 YRGEVVIQTYKPEHYAIQSAATGNYKEFYTKEIHYRKLGEYPPEKHLLGIILYSVKPEEV 659 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 + L + E++ V GPV A PK +R I L+ R L N Sbjct: 660 TRAGEVLAGYLKGEK--SEEVTVNGPVWAAIPKIRDIYRKIIYLKSSVRNELVRAKNQVE 717 Query: 710 ALINTIPDSRKVKWVLDVDP 729 P KV D +P Sbjct: 718 IYTKENPHFNKVSVQFDFEP 737 >UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Bacteria RepID=Q110J1_TRIEI Length = 914 Score = 736 bits (1900), Expect = 0.0, Method: Composition-based stats. Identities = 258/853 (30%), Positives = 383/853 (44%), Gaps = 138/853 (16%) Query: 3 VAHVALPVPL----------PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA 52 + V + VP + F Y +P + ++ G V VPFG+QQ GI + + Sbjct: 75 LVEVLVDVPFQTSTDDAEEEEKLFTYKIPPELDIQPGDIVIVPFGRQQV-GGIAIRKTSK 133 Query: 53 SE--LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHH----------PIG------- 93 L + LK + +++ F + W+LL A YY P G Sbjct: 134 LPEGLSSDRLKNISDIITKG-FFPATYWQLLEKVAIYYQTPLIKVIRAALPPGLLKGSQR 192 Query: 94 --DVLFHALPIL--------------LRQGRPAANAPMWYWFATEQGQAVDLNSL----- 132 ++ A+P + Q + Y +G L L Sbjct: 193 RIRIIEAAIPTGGEIFLNANAQKILEILQNSKTKDYTWKYIQRQVKGAERGLKDLLQRGW 252 Query: 133 ----------------------------KRSPKQQQALAALRQ--GKIW-RDQVATLEFN 161 +P+QQ+ + LRQ G++W + + T + Sbjct: 253 VESYLEPPSPPKPKLRQAVTLVAQTPPKDLTPRQQEVMEVLRQSGGEMWLTELLNTCKTT 312 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 + ++ L +KG + + + ++ L + Q A+ I + F+ L Sbjct: 313 TSVVKKLEEKGYAVIQEQEILRREQGRGNTRDEIKM-LTSYQTEALTTI-TKIQEFAQVL 370 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKTEVYL + +L GK ALV+VPEIGLTPQ RFR RF V V HS L+ Sbjct: 371 LHGVTGSGKTEVYLQAIAPILENGKSALVLVPEIGLTPQLTDRFRARFGKKVYVYHSALS 430 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDL 340 ER W G I+IGTRSA+F P LG+IV+DEEHD+S+KQ YHAR + Sbjct: 431 AGERYDTWRNMTWGIPQIIIGTRSAIFAPLPKLGLIVLDEEHDNSFKQDRPAPCYHARTV 490 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQ----KKYR----------------------- 373 A +RA E P+ILGSATP+LE+ ++ KK + Sbjct: 491 AKWRAELENCPLILGSATPSLESWLETRKYYQDKKIQASPYLLENIDKNVSPTGNTQNLT 550 Query: 374 ----LLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLN 426 L L R + ++D++ Q Q + L +++ + Q ILF++ Sbjct: 551 PNTYYLSLPERIHSRPMPPVEIVDMRQQLRQGNRTMFSYPLQEALQELQETKQQGILFIH 610 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLH----QAQHHLRCHHCDSQRPVPRQCPSCGST 482 RRG++ + C CG + ECP CD + H A LRCH+C+ P++CP CGS Sbjct: 611 RRGYSTFVSCRSCGHVMECPHCDVSLSYHYTHEGATELLRCHYCNYNELQPQRCPKCGSP 670 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 G GT+++ Q L FPG+ R D DTT +K A L + G A +LIGTQML Sbjct: 671 FFKFFGSGTQKVAQELTRQFPGLRYIRYDSDTTRKKDAHRNLLNQFANGEADLLIGTQML 730 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 KG VTLV ++ DG L +D+R+ ER Q QVAGRAGR G V++QT+ PE Sbjct: 731 TKGLDLAQVTLVGVVSADGLLHFSDYRANERTFQTLLQVAGRAGRGDNPGRVIIQTYTPE 790 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HP++Q + Y++F E L R + PP+ +++R ++ + Q+L +++ Sbjct: 791 HPVIQAVQRNDYESFVETELQGRAELHYPPYGRLILLRLSSYDPTEVAVTAQELASVLRE 850 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQ----HPSRVRLQHIINGTLALINTIPDS 718 EK +LGP PA + R+RWQILL+ + + L + N Sbjct: 851 KE-GKEKYDLLGPAPAPIARIANRYRWQILLKLLSGYENVPDLTQLSNFCRP-------- 901 Query: 719 RKVKWVLDVDPIE 731 V +DVDP+ Sbjct: 902 -GVSLTVDVDPMN 913 >UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID=C7RHM6_ANAPD Length = 790 Score = 733 bits (1893), Expect = 0.0, Method: Composition-based stats. Identities = 227/780 (29%), Positives = 380/780 (48%), Gaps = 79/780 (10%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGK-QQERIGIVVSVSDASELP 56 A V L L R+F Y +P+ + + RV VPFG + + + + D + Sbjct: 2 FAKVILDTNSRFLDRSFTYKVPDRLVDDISIARRVLVPFGGGNKTYVAFIYELVDDLDSD 61 Query: 57 LN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL-PILLRQ-------- 106 +N ++K +++++D + ++ + L + + Y PI L + P ++ Sbjct: 62 INFKIKEIIDLIDDRKLISNELMDLAFFMSKRYISPIQAGLKQVMPPTKIKDIHVYYQNV 121 Query: 107 -----------GRPAANAPMWYWFATEQGQAVDLNSLK---------------------- 133 + F+ +G+ K Sbjct: 122 SELSNDFLDYLKEKREIKDIARKFSDYRGKLDYYLQEKIVKETFDVKSSQKISYDEYADL 181 Query: 134 ----------RSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDL--ASE 179 R+ KQ + + L++ I ++ +A + ++L AL K + + + Sbjct: 182 TKMNEEKINSRAHKQIEIVNYLKENGITEVKELLANTKAGKSSLNALISKSIISITKKEK 241 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 E SD Y + LN EQ A I++ D +LL GVTGSGKTE++L ++E Sbjct: 242 EKEISDLYRKY----NKFTLNDEQQKAYDTINN--DRKGHFLLYGVTGSGKTEIFLQMVE 295 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 V+++GK+A+++VPEI LTPQTI RF+ RFN + ++HS L ER + W NGE I Sbjct: 296 KVISEGKEAIILVPEISLTPQTIERFKGRFNEKIAIMHSRLTPKERFNQWRMINNGEVKI 355 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIG RSA+F PF+NLG+I+IDEEHD SY + +YH ++A+ RA + +IL +ATP Sbjct: 356 VIGARSAIFAPFRNLGIIIIDEEHDQSYVSSQDPKYHTDEIAIERARAHSCNLILATATP 415 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA---PALITRMRQHLQ 416 ++ ++ V++ + L++L R N P+I ++D++ + ++ + L + +L+ Sbjct: 416 SIRSMARVEEGDFELIKLNNRVNNHMPSID-IVDMREELKESNFSMISKKLYREIENNLK 474 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q ILFLN+ G C CG + +C CD T H+ L CH+C + R C Sbjct: 475 NSEQTILFLNKVGHDSFTFCRSCGHVIKCEACDVAMTYHKNVDKLVCHYCGRTKNQVRIC 534 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P C S + G GTE+LE+ + FP I R+D T + K E ++ IL Sbjct: 535 PVCHSKKIKEFGAGTEKLEEEVRNFFPNANILRMDSMTATNKNLYEMMYRDMKNNKIDIL 594 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKG F +V+LV ++ D +L DF++ E QL TQV+GRAGR +G V++ Sbjct: 595 LGTQMIAKGLDFKNVSLVGIISADLSLNVGDFKANETTFQLLTQVSGRAGRDKIKGRVII 654 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT+ P++ ++Q Y+AF E L RR PP+ + + +R + + A ++L Sbjct: 655 QTYRPDNFVIQAAKNNDYEAFYENELKLRRAFNYPPYKNILTIRVVNESRLRAVDISKKL 714 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 I S L + + ++GP P + ++R+ IL++ +N + +IN + Sbjct: 715 YKDI-SKLLNNTSIELIGPNPCKIARINNKFRYNILIKVDDDG-----LNNVIDIINRLR 768 >UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM71_9FIRM Length = 755 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 227/747 (30%), Positives = 365/747 (48%), Gaps = 24/747 (3%) Query: 4 AHVALP---VPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQ-QERIGIVVSVSD-ASELP 56 VA+ + + + Y +P+ + + G V VPFG+ + R+ +V+ V + + Sbjct: 6 VQVAVDNATIHFDKLYSYRIPDALLGRVWPGSMVLVPFGRGDKPRMAVVLRVEELDAGAA 65 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK + + + T + L+ + D + + +P + + Sbjct: 66 PKRLKMLHDAAPEQTRLTPDLLELVHFLKDRTFCTWFEAVKAVIPYGAQYRAAVVDGKPV 125 Query: 117 YWFATEQGQAVDL-------NSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR 169 + K P+Q+ A+ ALR+G + Q+ + + L L Sbjct: 126 MQSRLSRSTERVYTLTGELPQKPKPGPRQKAAVEALRKGPLTAHQLDEVGISKTTLDTLC 185 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW--LLAGVTG 227 +KG+ +A + D + + + L EQ A A+ + LL GVTG Sbjct: 186 EKGVLSVAEQDKAL-DLFADIPYEPQPITLAPEQQRAFAALAPDLEDGKPHAALLHGVTG 244 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKT V+L ++E L G++A+V+VPEI LTPQ I R + F + + V HS LN++ERL Sbjct: 245 SGKTIVFLKLIERTLELGRKAIVLVPEISLTPQMIRRLKSTFGSRLAVQHSALNNTERLL 304 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + G A IV+GTRSA+F P +N+G+I++DEE + +Y+ + RY A D+A RA Sbjct: 305 QWRLIQQGHADIVVGTRSAIFAPLQNIGLIIMDEEQEHTYQSESAPRYDAHDVAKKRAAM 364 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LA 404 E ++ SATP ET + KY+LL LT+R G +D++ + ++ Sbjct: 365 ENSLLVFASATPMTETYHAAESGKYKLLTLTQRYGGRPLPQVDFIDMRAELAAGNPREVS 424 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 +I ++++L+ Q IL LNRRG+ +C CG + +CP C H+ Q L CH Sbjct: 425 TRMIRELQENLENGEQSILLLNRRGYHTVAMCASCGHVLKCPNCSVPLVYHKPQQALMCH 484 Query: 465 HCDS-QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HC RP+P+ CP CG L G GT+++E+ LA L PG I R+D+D+T++K A E Sbjct: 485 HCGHIVRPLPQLCPECGG-KLNYSGFGTQRVEEELAELLPGARILRMDQDSTNQKNAHET 543 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 LA+ R IL+GTQM+AKG F VTLV +L +D LF FR+ E L TQV G Sbjct: 544 MLAQFGRQEYDILLGTQMVAKGLDFEKVTLVGVLGIDSLLFGQGFRAYESVFSLVTQVIG 603 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 R GRA G ++QT P HP+LQ + Y+AF + +A R+ PP+ + +V Sbjct: 604 RGGRAALPGRALIQTTVPNHPVLQLAAAQDYEAFYREEIAFRKFGLYPPFCAFCVVGFVG 663 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKL--WVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + + L+ ++ +LGP P G++R+++ L+ + Sbjct: 664 AAEGTVAMAAHRFGTLLAERAAQHPQIPLRLLGPAPMGITMLNGKYRYKLTLKCRNNAAF 723 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ TL +K +LD + Sbjct: 724 RSLLQETLDAYAQEKLPQKASVILDFN 750 >UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ4_9FIRM Length = 721 Score = 731 bits (1888), Expect = 0.0, Method: Composition-based stats. Identities = 256/739 (34%), Positives = 372/739 (50%), Gaps = 30/739 (4%) Query: 1 MPVAHVAL---PVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 M +AHV + + L RTF Y +G TV G RV VPFG + +G V V + S Sbjct: 1 MKLAHVFIEHSTMHLDRTFSYGC-DGFTVCRGMRVVVPFGA-KIIVGFVERVEEISAQEA 58 Query: 58 N----ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 E+K ++ VLD EP+ ++ L A Y P LP L+ A Sbjct: 59 AAYDFEIKRIIRVLDEEPLLNEELFELANMMAKRYIVPRIACFQCILPAKLKPRSTAKCR 118 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + W E+ A + KQQ L A+++ K + + + L G Sbjct: 119 KLETWVRYEKDIA------SLTKKQQVVLEAMKEAKEMLRTTYYQMY-KSVGKKLISLGC 171 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + E SG LN +Q AV A+ + LL GVTGSGKTEV Sbjct: 172 VTVFER--EAQAVLGCEEPSGPVFDLNAQQQHAVDAVLH--HSAMVTLLHGVTGSGKTEV 227 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 +L + + + + KQ L++VPEI LTPQ IAR ++RF A V + HS LN+ E+ + K Sbjct: 228 FLHLAKAMRERDKQVLILVPEISLTPQMIARVKQRFGAQVAIYHSALNEQEKYEQYQLVK 287 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 + IV+GTRSA+F PF +LG+IV+DEEHD+SYKQ G RYH RD+A+ RA Q ++ Sbjct: 288 KHQVDIVVGTRSAVFMPFDHLGLIVMDEEHDTSYKQDRGVRYHCRDIALQRAKIHQAKLV 347 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRM 411 L SATP+LE+ + Y+L+ + +R P ++ V + K + ++ AL+ + Sbjct: 348 LASATPSLESYARAHKGIYQLVEMPKRINEQFPQVKLVEMREAVKKKESYLMSNALLDAI 407 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 LQ QVIL LNRRG+ P L C +CG++ CP C+ + H+ + L+CH CDS P Sbjct: 408 YTRLQRKEQVILLLNRRGYTPILRCMECGYVQMCPNCETAMSYHKEEGVLKCHICDSVMP 467 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 VP CPSC S +G+GT++LE+ + FP I R+D DTT +K A E L + + Sbjct: 468 VPTHCPSCHSAAWRYMGMGTQKLEEFIQIKFPQAKIIRMDADTTHKKHAHENYLRDFGKH 527 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A IL+GTQM+AKG F +VTLV +L+ D L +D+RSAE L Q GR+GR KQ Sbjct: 528 KADILLGTQMIAKGLDFENVTLVGILNGDALLNRSDYRSAELCYDLLEQACGRSGRGEKQ 587 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 GEV++Q + +H +Q + Y F + + R + PP+T + + + A Sbjct: 588 GEVIIQAYDTKHYAIQCAAHHDYKTFFKNEMNYRHLAGYPPYTYLISLTFSHKQEELAYQ 647 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 Q L S A ++ VLGP K G R +ILL+ L Sbjct: 648 GAQ----LAFSLLKAKSEVRVLGPT--ALHKLRGECRIRILLKGKQEELLTAYAKDVYE- 700 Query: 712 INTIPDSRKVKWVLDVDPI 730 + +K + +D+ P+ Sbjct: 701 -QHLYKKQKARLDIDLSPL 718 >UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepID=C5EIZ7_9FIRM Length = 767 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 235/762 (30%), Positives = 367/762 (48%), Gaps = 39/762 (5%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFG-KQQERIGIVVSVSDASELP 56 A++ + + + RTF Y +PE ++ + AG +V +PFG ++R G VV ++D +E+ Sbjct: 5 YANIIIDISHESVDRTFQYRIPEHLSGSIHAGQQVYIPFGQGNRQRKGYVVGLTDQAEID 64 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 N++K V ++ + L W + Y + L LP+ + Sbjct: 65 ENKIKDVAGIVQGSVTAESQLIWLAWWMKERYGSTMNQALKTVLPVKQKVKEAPKRQLKC 124 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLC 174 +AV+ K + + L A + + + L A ++ L + G+ Sbjct: 125 LLDQEGLLRAVEEARRKNHKARLRLLEAFLLAPVIPYEEAMNRLSLTAAVVKPLEEGGVL 184 Query: 175 DLASETPEFSDWRTNYAVSGERLR------------------LNTEQATAVGAIHSAADT 216 + + ++G LN Q +I Sbjct: 185 KVEVVERYRNPLLEMQRLAGMPREGTTFAGGGTAGNPGTFPALNQAQQEIADSILRDYGE 244 Query: 217 --FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 +L+ G+TGSGKTEVY+ ++ +VL G+Q +V++PEI LT QT+ RF RF V Sbjct: 245 GIRRTYLIHGITGSGKTEVYMELIAHVLQAGRQVIVLIPEISLTWQTVMRFYTRFGNRVS 304 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR 334 V++S ++ ER + +A+ G+ I+IG RSALF PF NLG+I+IDEEH+++YK + R Sbjct: 305 VMNSRMSAGERYDQYERARTGDIDIIIGPRSALFAPFSNLGLIIIDEEHENAYKSELSPR 364 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLD 393 Y AR+ A RA + +ILGSATP+LE+ + +Y L + RA +A A ++D Sbjct: 365 YDAREAAAVRAEANHASLILGSATPSLESYTKALRGEYGLFTMKERAKADASLAKVEIVD 424 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 L+ + + L M L Q++LF+NRRG+A + C CG +CP CD Sbjct: 425 LREELRAGNRSIFSRRLQELMEDRLAKKEQIMLFINRRGYANFVSCRSCGEAIKCPHCDV 484 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 TLH+ + CH+C P+ CPSCGS ++ P G GT+++E A LFP I R+ Sbjct: 485 TLTLHR-NGRMMCHYCGYSMEQPKVCPSCGSRYIAPFGTGTQKIEAMAAGLFPDAGILRM 543 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DTTSRKG ++ L+ RG A ILIGTQM+ KGH FP VTLV L D +LF++D+R Sbjct: 544 DLDTTSRKGGHQEILSAFARGEADILIGTQMIVKGHDFPKVTLVGALAADLSLFASDYRC 603 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 E+ L TQ AGRAGR +G VV+QT+ P+H +Q + Y+AF Q A RR++ Sbjct: 604 GEQTFALLTQAAGRAGRGELEGNVVIQTYQPDHYCIQAAARQDYEAFYGQETAYRRLLGY 663 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE------KLWVLGPVPALAPKRG 684 PP + ++ + + + L ++GPV A K Sbjct: 664 PPAVGLLTIQMACPREDVVEQAAGRTAGWVEGWKAGQDRNGPGRDLKLIGPVNAPVYKVN 723 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 +R + ++H + L I + + D Sbjct: 724 DIYRKILYIKHENYDILIQIRKMAELRLKEAEGRFGLTIQYD 765 >UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=B8I253_CLOCE Length = 818 Score = 730 bits (1884), Expect = 0.0, Method: Composition-based stats. Identities = 220/818 (26%), Positives = 369/818 (45%), Gaps = 93/818 (11%) Query: 1 MPV--AHVAL---PVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQ-ERIGIVVSVSDA 52 M V V L + + Y +PE ++ + GCRV VPFG + + G V+ + Sbjct: 1 MKVTTVSVVLSNTTRAFDKKYTYSVPEKLSEQVFRGCRVLVPFGNGELIKEGFVMETNPL 60 Query: 53 S-ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG---- 107 E K + E+L+ P+ T+ +LL W Y D++ LP + Sbjct: 61 VFEEKPITYKEIKEILEPYPLLTNDSIQLLDWMKRRYICTYFDIIKCMLPPGISVKTVKN 120 Query: 108 ----------------RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIW 151 + + E G+ L ++K + G + Sbjct: 121 IRIDTLNQKEFKKTGLNKVLSILTYCGGECEYGELRSLCNIKGFK--AAIDELCQSGTVI 178 Query: 152 RDQVATLEFNDAALQAL-RKKGLCDLASETPEFSDWRTNYAVSGERLRLNT--------- 201 ++ + N ++A+ + ++ E R + E L N Sbjct: 179 LEESYEQKVNAKTVKAVSLARPASEIVEELENNRIKRIQHVKVLEILLENEIVSVSDIQR 238 Query: 202 -------------------------------EQATAVGAIHSAADTFSAWL--------- 221 ++ A + + L Sbjct: 239 FAGVTASVLNTLSKHGYISYKSLEIKRNPLKDKQYAKTEPLPPTEDQANTLMFLKKQLDS 298 Query: 222 -------LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 L G+TGSGKTEVYL ++ + GK+A+++VPEI LTPQ + RF RF V Sbjct: 299 RTFQETLLHGITGSGKTEVYLQLISHCFELGKKAILLVPEISLTPQMVERFVSRFGNRVA 358 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR 334 V+HS L+ ER W ++G+ +V+G RSA+F P +NLG+IVIDEEH+SSYK + R Sbjct: 359 VIHSKLSLGERFDQWKLIRDGKVDVVVGARSAVFAPVENLGLIVIDEEHESSYKSESLPR 418 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL 394 Y+A+++A R ++ GSATP++ET N + K +LL + R A ++D+ Sbjct: 419 YNAKEVAQKRCEINDCLLVYGSATPSIETYYNTETGKIQLLEMKNRPKTAILPKVELVDM 478 Query: 395 KGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + + + L+ ++++ + + Q ILFLNRRGF+ ++C DCG+ +CP C Sbjct: 479 RLELENGNKTPFSSRLVEELQKNRENNQQSILFLNRRGFSTFVICRDCGYTMKCPDCSIA 538 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T H L CH+C P CPSC S ++ G+GT+++E+ ++ L + R+D Sbjct: 539 LTYHSKTKRLICHYCGFTVQNPSTCPSCKSENIRYFGIGTQKIEEEVSKLITEASVIRMD 598 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 DT K A E+ L I++GTQM+AKGH FP+VTLV +L DG L + D+R++ Sbjct: 599 MDTVGYKNAHEEILNRFKNENINIMVGTQMIAKGHDFPNVTLVGVLAADGMLNTGDYRAS 658 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER QL TQV+GRAGR G V++QT++ + + + F Q + R+ + P Sbjct: 659 ERTFQLLTQVSGRAGRGDIGGRVIIQTYNTDEYSIIAACNHDFCRFYRQEIMIRKRLDYP 718 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P+T+ ++ ++ + ++ L+ S + + +LGP + PK ++RW++ Sbjct: 719 PFTNIAVITFTGIRDRGVFEASKSIKPLL--SKVCPKDTLILGPSRSPIPKIASKYRWRL 776 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +++ L + T + V +D++P Sbjct: 777 VIKEKDVELLIDRLTETADKFWRNNKDKDVSMSIDINP 814 >UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4F8_PAESJ Length = 833 Score = 727 bits (1876), Expect = 0.0, Method: Composition-based stats. Identities = 231/664 (34%), Positives = 344/664 (51%), Gaps = 28/664 (4%) Query: 94 DVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLK----RSPKQQQALAALRQGK 149 + L L R +A +L R+ KQ++ LA + + Sbjct: 166 EALRDGLLQEQTSIRDRLAIRKVLTVFPPDDEAAAREALANFPARAGKQRELLAFMLERG 225 Query: 150 ---IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATA 206 + +A + A+++AL KGL L E + L L Q Sbjct: 226 EAMPLQALLAEAGGSPASVRALADKGLLGLHEVEQERDPYAGRDFERTVPLPLMPGQQDV 285 Query: 207 VGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIAR 264 I + LL GVTGSGKTEVY+ +++ L GKQA+V+VPEI LTPQ + R Sbjct: 286 YERIAGTVSRGEPQVLLLHGVTGSGKTEVYMQSIQHCLELGKQAIVLVPEISLTPQMVER 345 Query: 265 FRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHD 324 F+ RF V VLHS L++ ER W K ++ + IG RSA+F PF+ +G+I+IDEEH+ Sbjct: 346 FKGRFGEAVAVLHSRLSNGERYDEWRKIRSRRVQVAIGARSAIFAPFERIGLIIIDEEHE 405 Query: 325 SSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY-----RLLRLTR 379 SSYKQ+E +YHARD+AV RA ++LGSATP+LE+ ++ LL + Sbjct: 406 SSYKQEESPKYHARDVAVRRARQHGAAVVLGSATPSLESFAAASRQPAPGKESALLPMPE 465 Query: 380 RAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 R G+ V+D++G+ + L + L+ Q +L LNRRG++ ++C Sbjct: 466 RVGSRPMPPVQVIDMRGELQDGNRSMFSRKLHAALADRLERGEQSVLLLNRRGYSTFVMC 525 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CG+ A CP CD T HQ LRCH+C P++CPSC S H+ G GT+++E+ Sbjct: 526 RSCGYTAACPHCDISLTYHQKSRALRCHYCGHAELAPKECPSCSSEHIRYFGTGTQRVEE 585 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 LA LFPG+ + R+D DTTS K + E+ L + A +L+GTQM+AKG FP VTLV + Sbjct: 586 ELAKLFPGIRVIRMDVDTTSEKHSHEKLLKQFGERKADVLLGTQMVAKGLDFPYVTLVGV 645 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 + D +L DFRSAER QL TQVAGRAGR GEV++QT+ PEH + T + Y A Sbjct: 646 IAADTSLNLPDFRSAERTFQLLTQVAGRAGRHHLPGEVIIQTYSPEHYAILTAQHHDYAA 705 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHN----NQHAPLFLQQLRNLILSSPLAD----- 667 F + L R +M PP+ V+V + + F ++LR L + Sbjct: 706 FVREELKHRSVMGYPPYCRLVLVTMSHEQLPLLSSVSEQFAERLRGLASDEGVLGPLEGG 765 Query: 668 --EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 + +LGPV + + R+R+Q ++++ + + ++ +A ++ V++ + Sbjct: 766 LPRAMDILGPVASPISRMKDRYRFQCVIKYRGNIDIPALLRHAMAPFVEGSQAKLVQFSI 825 Query: 726 DVDP 729 DVDP Sbjct: 826 DVDP 829 >UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepID=A6TRW9_ALKMQ Length = 829 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 209/640 (32%), Positives = 329/640 (51%), Gaps = 14/640 (2%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFN 161 ++ L LK + KQ+ L L++ +WR D + E + Sbjct: 186 MKTKVKIKTETYMELKIDHHELERCLEGLKNAKKQKTILLLLKEQPVWRIKDLMIAGEAS 245 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSA 219 A + L +KG+ + + + + N EQ + I + Sbjct: 246 RATINTLIEKGMASIYEKEVRRDPLAQQDYAAFPKFLPNEEQKGVIDEITQLIKQERRQN 305 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 +LL G+TGSGKTE+YL ++E V GKQ +V+VPEI LTPQTI RF+ RF + VLHS Sbjct: 306 YLLHGITGSGKTEIYLQLIEEVNRMGKQGIVLVPEIVLTPQTIERFKGRFGDGIAVLHSH 365 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 L+D ER W + ++GE VIG RSA+F P +NLG+I+IDEEH+ +YK ++ +YHA + Sbjct: 366 LSDGERFDEWRRIQSGEVNTVIGARSAIFAPLQNLGLIIIDEEHEHTYKSEQNPKYHAVE 425 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQK 398 +A R E +ILGSATP++E + ++ +L+ L +RA ++D++ + Sbjct: 426 VAKQRGVIENAIVILGSATPSVEDYSLTENEETIKLMTLNKRATQGELPPVEIVDMREEL 485 Query: 399 VQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + L+ L T + ++L+ Q ILFLNRRG++ + C CG++ +C CD T H Sbjct: 486 DEGNKSILSKRLHTAIEENLEKRKQTILFLNRRGYSTFISCRQCGYVVKCKHCDISMTYH 545 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 A +L+CH+C PR CP C S+++ G GT+++E+ + F + R+D DTT Sbjct: 546 MASGNLQCHYCGESLEPPRICPECSSSYIKYFGTGTQKMEKIVQQQFSKANVERMDLDTT 605 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 SRKG+ + L +G ILIGTQM+AKG FP+VTLV ++ D L DFR++E+ Sbjct: 606 SRKGSHGRILERFKKGEIDILIGTQMIAKGLDFPNVTLVGIVSADMMLNFPDFRASEKTF 665 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL TQVAGRAGR G V+LQT+ P+H + Y F E L R+ PP+ Sbjct: 666 QLITQVAGRAGRGLDPGVVILQTYDPDHYSILAASKHDYRTFYEDELMIRKAFGYPPFNK 725 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLIL----SSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 + + + +++ + I D +LGP P++ K ++R+Q+ Sbjct: 726 LINLNFSGVSEMQVITVTKKIVDGIKYILNKKGFIDLDEVILGPNPSVIGKINRKYRYQV 785 Query: 692 LLQHPSRV--RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +L+ L+ ++ L + +D++P Sbjct: 786 ILKDQGVPFILLKKVVKYLLIDQRQRFIPDTIHSSIDINP 825 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 88/233 (37%), Gaps = 26/233 (11%) Query: 3 VAHVALPV---PLPRTFDYLLPEGM--TVKAGCRVRVPFG-KQQERIGIVVSVSDASELP 56 +A V + + + FDY +P+ + ++ G RV VPFG ++ V+ + + S Sbjct: 7 IAQVIVDHKNHHIDKAFDYGIPDHLLGKIQRGMRVLVPFGNGNKKLEAYVLKIMEHSG-A 65 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK V+E++D +P+ +L+ W Y + + +P + + Sbjct: 66 KQRLKKVIELIDQKPILREEQMKLIQWIKQEYLCKYIEAIHCIVPRGMIHREEKMVTLIN 125 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQ--GKIWRDQVA---TLEFNDAALQALRKK 171 + E + KQ + L AL GK D++ L+ L L +K Sbjct: 126 DHWRQEISTQ--------ATKQLKVLEALEAMGGKTPYDKLNKALELKDMSQILNNLSEK 177 Query: 172 GLCDLASETPEFSDWRTNY--AVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 GL DL E +T + + L + + +A + LL Sbjct: 178 GLLDLTYEMKTKVKIKTETYMELKIDHHEL----ERCLEGLKNAKKQKTILLL 226 >UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C6J2B4_9BACL Length = 854 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 223/654 (34%), Positives = 334/654 (51%), Gaps = 26/654 (3%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR---DQVATL 158 + + R + + + Q + ++ +Q++ L L + + + D ++TL Sbjct: 197 AIKDKVRKKTVKTVAAAVSGQAAQEALASFGPQARRQKEVLQYLLEVGLPQSLQDVLSTL 256 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--T 216 + ++ L +KG + ++ E L EQ + D Sbjct: 257 QVTAGTVKKLAEKGFAVIEDVEVFRDPYQGRRFQRSEPLPRTPEQELVYRRLAETLDAQR 316 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 +LL GVTGSGKTEVYL +E +A G+QA+V+VPEI LTPQ + RF+ RF A V VL Sbjct: 317 HEVFLLHGVTGSGKTEVYLQTIERCIASGRQAIVLVPEISLTPQMVERFKGRFGAKVAVL 376 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HS L+ ER W K + G + IG RSA+F PF LG+IV+DEEH++SYKQ+E +YH Sbjct: 377 HSRLSTGERYDEWRKIREGRVEVAIGARSAIFAPFSRLGLIVMDEEHETSYKQEETPKYH 436 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR-------LLRLTRRAGNARPAIQ 389 ARD+AV RA +ILGSATP+LE+ + LL + +R +R Sbjct: 437 ARDVAVRRARQHGAAVILGSATPSLESYHAARSGGGEFGEFAPILLEMKQRPAGSRLPGV 496 Query: 390 HVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECP 446 ++D++ + + + AL + L+ Q +L LNRRG++ ++C CG++A CP Sbjct: 497 QIVDMREELKEGNRSMFSRALHQGIAARLERGEQTVLLLNRRGYSTFVMCRTCGYVASCP 556 Query: 447 RCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVP 506 CD T HQ ++LRCH+C P CP CGS H+ G GT+++E LA LFPG+ Sbjct: 557 NCDISLTYHQKSNNLRCHYCGYAEAAPSVCPECGSEHIRYFGTGTQRVEGELAKLFPGIR 616 Query: 507 ISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA 566 + R+D DTTS KGA E+ L +L+GTQM+AKG FPDVTLV ++ D AL Sbjct: 617 VIRMDVDTTSEKGAHEKLLQAFREKKGDVLLGTQMVAKGLDFPDVTLVGVIAADTALNFP 676 Query: 567 DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERR 626 DFRSAE+ QL TQVAGRAGR GEV +Q++ PEH + Y +F + L R+ Sbjct: 677 DFRSAEKTFQLLTQVAGRAGRHQLPGEVFIQSYMPEHYSIVHASGHDYLSFVREELKTRK 736 Query: 627 MMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD-----------EKLWVLGP 675 M PP++ ++V + + + L +LGP Sbjct: 737 TMHYPPYSRLILVTLSHEKLPLLLRMAENFAGDLRAKAQRQGWFGSLDRFVPAALDILGP 796 Query: 676 VPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 V + P+ R+R Q ++++ + ++ T A ++ +DVDP Sbjct: 797 VASPIPRIKNRYRIQCMVKYRGDLDAVSLVQETAAATLDQWRDALLQISIDVDP 850 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 52/237 (21%), Positives = 92/237 (38%), Gaps = 20/237 (8%) Query: 2 PVAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 +A V + VP R FDYL+PE M ++ G RV VPFG++ + G VVS+ + E+ Sbjct: 4 RMAKVIVDVPSRETDRPFDYLIPESMAGWIEVGSRVGVPFGRRTVQ-GFVVSLHEQPEMD 62 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI-----LLRQGRPAA 111 +K + E+LD P + L W + Y + L +P R R A Sbjct: 63 PARMKPIQELLDMMPPLPPDLVELAEWMSRKYACSLIAALQAMIPAALKGKAERYIRVAD 122 Query: 112 NAPMWYWFATEQGQAVDLN-----SLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA-- 164 +A G+A N +P++++ L +R ++ +AA Sbjct: 123 DAAEEGALTGADGRAEGENHAFTFPHLLTPEEEEILRFVRASDTVTMNQLGAKYPEAAGL 182 Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 ++ + +G+ + + +T V+ A+ + A L Sbjct: 183 IKDMLARGVLTESQAIKDKVRKKTVKTVAAAVSG--QAAQEALASFGPQARRQKEVL 237 >UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales RepID=Q0K5N2_RALEH Length = 773 Score = 723 bits (1868), Expect = 0.0, Method: Composition-based stats. Identities = 294/749 (39%), Positives = 402/749 (53%), Gaps = 27/749 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V VAL P FDYL V G V VPFG++ +G+ V+ +D+S++P + L+ Sbjct: 29 VIRVALDTPADDCFDYLATPE--VAPGDLVVVPFGRR-SMVGVAVAYADSSDVPADRLRP 85 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ-----GRPAANAPMWY 117 V + L+ P L +AA YY +G+V+ ALP LR+ G Y Sbjct: 86 VAQRLEWMPPLQPDWIGLAAFAARYYQRRLGEVMLPALPPALREAEGWPGLAQRARTDEY 145 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN------DAALQALRKK 171 +A+ R+ + AL + + + + A L + Sbjct: 146 RLLPGHAEALLAAVPPRARSVRALAQALAERAAAAEPLTLADARVLCAAAPARLAEWQAA 205 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G + AS T L+ EQ AV AI A + F+ +LL GVTGSGKT Sbjct: 206 GWVE-ASRTARPLLPTDPAQPPSAAPPLHDEQRAAVQAIAEA-EGFAPFLLHGVTGSGKT 263 Query: 232 EVYLSVLENVLAQG--KQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSA 288 EVYL ++ +L + Q L++VPEI LTPQ AR RF P+ VLHSGL D ER Sbjct: 264 EVYLHAMQALLERDPQAQVLMLVPEINLTPQLQARIAARFPHLPLAVLHSGLADQERSLQ 323 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 WL A GEA IV+GTR A+ L +IV+DEEHD+SYKQQEG RY ARDLAV+RA Sbjct: 324 WLAAHRGEARIVLGTRMAVMASLPALALIVVDEEHDTSYKQQEGLRYSARDLAVWRAKQR 383 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQ-----AG 402 I ++LGSATP++ET Q YR L L RA A ++DL ++ + G Sbjct: 384 GIAVVLGSATPSMETWWRAGQGTYRKLVLRERAQAEATLPTVRLVDLNHERQRQRPLFEG 443 Query: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 L+ L+ + L Q +LFLNRRG+AP + C CGW++ CPRC Y LH+ + LR Sbjct: 444 LSVPLLEAIDARLARGEQSLLFLNRRGYAPVIACDSCGWLSGCPRCSAYLVLHRPERRLR 503 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CHHC + PVP CP CG+ + P+G GT+++E+ LA FP I+RID D+T RKG+ + Sbjct: 504 CHHCGLEAPVPHHCPDCGNVDIAPLGRGTQRIEEALATRFPQARIARIDADSTRRKGSAQ 563 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 EVH G IL+GTQM+AKGH F VTLV ++ D A+FS DFR+AE QVA Sbjct: 564 AMFDEVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDFRAAEHLFASLMQVA 623 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGRAG GEV++QT +P+ P LQ L YD FA L ERR LPP+ V+V A+ Sbjct: 624 GRAGRAGLPGEVLIQTRYPDTPALQALTRHDYDGFAASQLRERRQAGLPPFCYQVLVTAD 683 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 + A FL+ R + LA E + + PVP + R R Q+L++ SR LQ Sbjct: 684 HGQLERALQFLEVARRHAETCELAAE-VQLHDPVPMSMVRIFNRERAQMLVEATSRPVLQ 742 Query: 703 HIINGTLALINTI-PDSRKVKWVLDVDPI 730 + + + +++ V+W L++DP+ Sbjct: 743 RFVAEWVQTFADVGTEAKGVRWQLEIDPL 771 >UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae RepID=C8WGN6_EGGLE Length = 780 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 260/781 (33%), Positives = 373/781 (47%), Gaps = 57/781 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASE 54 M +A V L +P L + Y +PE ++ GC V VPFG +Q +G ++ + + +E Sbjct: 1 MKLASVILDIPTQALDAPYTYAVPEEAGDQPIEVGCAVLVPFGPRQA-VGFIIGIEERAE 59 Query: 55 ------LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 L +LK +V + S P F W ++ Y P+ + P Sbjct: 60 GDWPAGLDPAKLKGIVRAV-SRPYFDEEGAACAQWLSERYIAPLSSCVRLFTPPGGVPRM 118 Query: 109 PAANAPMWYWFATEQGQAVD-----------LNSLKRSPKQQQALAALRQGKI-WRDQVA 156 A W G+ D K + KQ AAL +G++ + A Sbjct: 119 VRAQGGYWRLEEPTVGEVDDRWVVPGPALADFEPRKNAVKQASIAAALERGELRVAELTA 178 Query: 157 TLEFNDAALQALRKKGLCDLASET-------------PEFSDWRTNYAVSGERLRLNTEQ 203 + L+AL K+G+ + P + L Q Sbjct: 179 EFGAVSSPLKALEKQGVVRIEHRRRMRGMAEGSAGSAPSADSAAVPSFTPSPKPPLTRGQ 238 Query: 204 ATAVGAIH--SAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 A A+ AI + L+ GVTGSGKTEVYL +E LA G+ A V+VPEI LTPQT Sbjct: 239 ADALAAIDAARSRGAGEVVLVDGVTGSGKTEVYLQAIEETLAAGRTACVLVPEISLTPQT 298 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 +ARFR RF V V+HS ++ ER W ++G A +V+G RSALFTP NLG+IVIDE Sbjct: 299 VARFRGRFGDLVAVMHSRMSQGERYDQWDFIRSGAARVVVGARSALFTPLSNLGLIVIDE 358 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN-VQQKKYRLLRLTRR 380 EH+ SYKQ RYHARD+AV+ A ++LGSATP++E L + + + L R Sbjct: 359 EHEGSYKQDSAPRYHARDVAVWMARRAGAAVVLGSATPSIEALHACAKNPSWHQVSLPER 418 Query: 381 AGNARPAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 A V+D+ + ++ A L + + L A + +L LN+RGFA LLC Sbjct: 419 ANGKPLPEVQVVDMAKEFSGGSRSMFALPLARALEEELAAGRKAVLLLNQRGFAKFLLCR 478 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 +CG++ ECP C T H+ + L CHHC + P P CP CGS +L G GT+++E Sbjct: 479 ECGFVPECPSCSTSLTYHERGNFLICHHCGYRIPTPPVCPECGSPYLKKFGAGTQRVEAE 538 Query: 498 LAPLF-------PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 L L PGVPI R+D DTTS KGA ++ L E A +L+GTQM+AKG F D Sbjct: 539 LRVLLDEMPGVDPGVPIVRMDADTTSGKGAHQRLLEEFAAADAAVLLGTQMIAKGLDFED 598 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +++ D L D+R++ER L QVAGRAGRA G V++QT+ + P ++ Sbjct: 599 VTLVGVINADTMLKLPDYRASERTFDLVEQVAGRAGRAELPGRVLVQTYEADAPAIRAAA 658 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS--PLADE 668 F L +RR++ PP+ V + +L+ + + + Sbjct: 659 AYDRALFLRDELPKRRLLGYPPYVRMANVLVWSKDEPAVRRVAAELQAALEEAVRDFGGD 718 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 VL P + K G +RW I+++ P+ L + L L R +DVD Sbjct: 719 GWSVLPATPCVLAKLRGTYRWHIVVKCPADADLSDAL---LPLFRRRKPDRDANVAVDVD 775 Query: 729 P 729 P Sbjct: 776 P 776 >UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH07_SEBTE Length = 715 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 203/719 (28%), Positives = 367/719 (51%), Gaps = 23/719 (3%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDAS--ELPLNELKAVVEVLDSEPVF 73 F Y E K G V F ++ R +++ ++ + + ++K + D Sbjct: 15 FTYKSEEEY--KPGEWCIVDFSGRK-RSAVILRETEEDKIDFDIKKIKEIDSRADILS-I 70 Query: 74 THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLK 133 + +L+ W A YY +V+ P +L+ E+ + + Sbjct: 71 PEDIIKLMDWMAVYYISDYYNVIKTVFPGILKLNYSQKAVFYKELENAEKYNSETIKDFN 130 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVS 193 K+++ + + K + + + + A++ +K L ++ E T+ ++ Sbjct: 131 DYMKKKKVVTSATLIKKFGKDLVSYAQSKDAVK--IEKHLVTKENKIKEIE---TDGIIN 185 Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 + LN EQ V AI + + + +L+ G+TGSGKTEVY+ +++N L G ++ +VP Sbjct: 186 ETDIELNEEQKNTVEAIENGNNDY--YLIKGITGSGKTEVYIRLIKNALKSGGGSIFLVP 243 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI LTPQ + R + F+ V +LHS L ER W K+G +VIG RSA+F P +N Sbjct: 244 EISLTPQMMDRLKREFSNNVALLHSRLTTKERKEEWNAIKSGNKKVVIGARSAVFAPVQN 303 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS-EQIPIILGSATPALETLCNVQQKKY 372 L I++DEEH+++YKQ+ RYH +++A+ RA+ E + +ILGSATP+ +T ++ Sbjct: 304 LKYIILDEEHETTYKQESNPRYHTKNVAIKRANLLENVKVILGSATPSFDTYYQAKEGVI 363 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 LL L R +A+ + +++L Q V + L+ ++ + L + Q+IL LNR+ F+ Sbjct: 364 ELLELKNRYNDAKKPVYDLVNL--QNVNGNFSHELLEKISEKLLKNEQIILILNRKAFST 421 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C DCG + CP C ++ ++ L+CH+C ++ C +CGS +L+ +G GTE Sbjct: 422 FIKCRDCGTVETCPNCSISLNYYRKENKLKCHYCGYEKYFKPVCGNCGSKNLIHLGTGTE 481 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E L +F I RID + T + E+ + IL+GTQ++AKG HFP+VT Sbjct: 482 KIELELGEIFKDARILRIDSENTKTQEQFEKMYNDFKNHKYDILLGTQIIAKGFHFPNVT 541 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV++++ D L DFR+ E+ QL TQ +GR+GR K+GEV++QT+ P++ ++ + Sbjct: 542 LVSIINADIILNFPDFRAGEKTYQLLTQASGRSGREKKEGEVLIQTYDPDNDAIKKTISD 601 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 Y+ + E + R++++ PP+ + + ++ N+I K Sbjct: 602 NYEGYYENEMEIRKILKYPPYGRIINIVISSETETGLKEKAEKFYNMIKEKNSFIPK--- 658 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 P A + R+R+QI ++ R+ + +I + + + + + V+ +DVDP+ Sbjct: 659 --PFKAPIYRINNRYRYQIFIKS-DRISINNIKHRIRSSLVNYRE-KDVRISVDVDPVN 713 >UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae RepID=PRIA_CHLTR Length = 753 Score = 722 bits (1865), Expect = 0.0, Method: Composition-based stats. Identities = 238/746 (31%), Positives = 373/746 (50%), Gaps = 25/746 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQ----QERIGIVVSVSDASELP 56 A V + + + DY +P + V G V+VP ++ + +I IV+ + +S+ Sbjct: 11 YAEVIVNANINKILDYGIPAELENLVTVGSVVKVPLQRKLTNDKYKIAIVLKIKSSSDF- 69 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 ++ ++ ++++ + L+ W + YY P+G + LP + Q + Sbjct: 70 VHVIQPILDISYEGITLPQDLIDLIFWISQYYFCPLGSAVSLFLPTVYAQTHSTKHQNNV 129 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---IWRDQVATLEFNDAALQALRKKGL 173 + + L +L +P+Q L L + + + E + L AL K+ Sbjct: 130 FLGQNAERTQEILKTLD-NPQQIAVLRKLLKTTKPLTPPELMRKTEVSAKTLDALVKQKF 188 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKT 231 + + + LN EQ AV I + + F LL GVTGSGKT Sbjct: 189 IRIVDSADLEIQDEQLHYFLPDPPTLNQEQLDAVNTISQSLVAEQFQTCLLFGVTGSGKT 248 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL V+ A GK +++VPE+ LT QT++ F+ F + V VLH L+DSER W K Sbjct: 249 EVYLQVIRKARALGKSVILLVPEVALTIQTLSFFKMHFGSEVGVLHYKLSDSERTQTWYK 308 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQI 350 A G I+IG RSA+F P +NLG+I++DEEHDS+YKQ + Y ARD+AV R Sbjct: 309 ASRGLINIIIGPRSAIFCPIQNLGLIIVDEEHDSAYKQSDLPPFYQARDVAVMRGKMTNA 368 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGLAPA 406 +ILGSATP+LE+ N KKY L L++RA + P ++D+ + + + + Sbjct: 369 TVILGSATPSLESYTNALSKKYTLSVLSKRASTSTPTKVFLIDMNLEMEKTRKKPFFSQT 428 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 +I + Q L+ Q I+F NRRGF + C C + +CP CD T H+ + L CH C Sbjct: 429 VIRSIEQRLEVGEQTIIFFNRRGFHTNVSCSSCKYTLKCPHCDMILTFHKTERILLCHLC 488 Query: 467 DSQRPVP-RQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +++ P CP C G+ L G GTE++E L FP R+D DTT +G+ + Sbjct: 489 NTRLSKPITSCPQCLGTMTLQYRGAGTEKIETLLREFFPTARTIRLDSDTTRFRGSHDAL 548 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 + + G A ILIGTQM+AKG HFP VTL +L D L+ DFR+AE+ QL TQV GR Sbjct: 549 VKQFATGKADILIGTQMIAKGMHFPAVTLSVVLSGDSGLYIPDFRAAEQVFQLITQVTGR 608 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 +GR+ GEV++QT P++ + L + + AF ++ + R++ PP+T + Sbjct: 609 SGRSHLPGEVLIQTFLPQNSTISHALAQDFPAFYKEEILGRKVCNYPPFTRLIRCIFLGK 668 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + + Q++ LI + + L + P K + +Q L++ + + Sbjct: 669 CSDYTLKETQRVHTLIKQNLDSQASLMEI--SPCGHFKVKDLFHYQFLIKTRNILVANKQ 726 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 I LA S KV+ ++DVDP+ Sbjct: 727 IQEALAAA---KLSSKVRCIVDVDPV 749 >UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ED7 Length = 814 Score = 722 bits (1863), Expect = 0.0, Method: Composition-based stats. Identities = 247/812 (30%), Positives = 382/812 (47%), Gaps = 87/812 (10%) Query: 1 MP-VAHVAL---PVPLPRTFDYLLPEGMTVKAGCRVRVPFGK-QQERIGIVVSVSDASEL 55 MP +A +A+ F Y +P+ + K GCRV VPFG+ + RIG+++ +S S Sbjct: 1 MPLIAEIAVSGTAYSFDMLFSYSVPDNIKAKVGCRVLVPFGRGNKRRIGVIMKLSQNS-- 58 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL---RQGRPAAN 112 +LKA+V +D EPV + + +L L+ + + D + LP + + R Sbjct: 59 -GKKLKAIVSQVDDEPVVSDELLQLALYLRENTYCTYYDAVRIMLPPAMSVRAKERFTLV 117 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALR----------------QGKIWRDQVA 156 + A L LK P + L G + D + Sbjct: 118 KNFTDFSALSDEAHELLEKLKEIPDNKSLNEVLENYILENGRRLPDELCDAGAMDSDNIF 177 Query: 157 TLEFNDAALQ--ALRKKGLCDLAS-----ETPEFSDWRTNYAVSGER------------- 196 DAA++ L K L + S + +D+ + Y + E+ Sbjct: 178 RQAVGDAAVRMVRLSDKYLSEPESFDLTPKQKIVADFLSEYGAAAEKEAAYMCGVTQAVV 237 Query: 197 --------------------------------LRLNTEQATAVGAIHSAA--DTFSAWLL 222 + L+ EQ +A A+ SA +A+LL Sbjct: 238 KRLIAGGAAAEYDMEVFRHVEDGSEEKCDPDEIVLSDEQQSAHDAVLSALFDRKAAAFLL 297 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKT V+ ++ + + G+QA++++PEIGLTPQ + RFR F V V+HSGL+ Sbjct: 298 HGVTGSGKTSVFEKLISDTVKMGRQAMLLIPEIGLTPQILRRFRSLFGERVAVIHSGLSQ 357 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 +RL + + KNG A IVIGTRSA+F P N+G+I++DEE + SYK RY D+A Sbjct: 358 GQRLDEYKRIKNGSADIVIGTRSAVFAPLDNIGIIIVDEEGERSYKSDSSPRYMTHDIAR 417 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 +R + ++L SATP++E+ ++ YRLL + +R + ++D+ ++ Sbjct: 418 HRCGYHKAVLLLASATPSVESYYLAEKGVYRLLEMNKRYSTSPLPEVSIVDMNLEREDGN 477 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 + L + ++L Q IL LNRRG+ + C DC CP C T H+ Sbjct: 478 RTEFSRKLAEELSRNLANGEQSILLLNRRGYHTVISCCDCYQPVYCPNCSVPLTYHKKND 537 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L CH+C CPSCGS L +G GT++LE+ LA FP + R+D DTT + Sbjct: 538 KLMCHYCGYVSERITVCPSCGSERLRNMGFGTQKLEEELAVYFPQARVLRMDADTTFSRY 597 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 + E+ A+ G I+IGTQM+ KG FPDVTLV +L VD ALF+ DFRS ER L T Sbjct: 598 SYEKNFADFRDGKYDIMIGTQMIGKGLDFPDVTLVGVLSVDKALFAGDFRSYERTFSLIT 657 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QV GR+GR +QG +LQT PEH ++ + Y F + +A RR M PP + Sbjct: 658 QVVGRSGRGERQGRAILQTFMPEHYIMNLAAAQDYKGFYNEEIAIRRAMIFPPVCDMAVF 717 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSP---LADEKLWVLGPVPALAPKRGGRWRWQILLQHP 696 ++ + L+ + VLGPV A + G++R++I+++ Sbjct: 718 CFAANDEVSVQKGADAVLALMKEKLDRMQPKTPIRVLGPVRASYGRINGKFRYRIIMKCK 777 Query: 697 SRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ I+ L + D + V D++ Sbjct: 778 NNAEIRGFISSLLTEAADLKDMKGVSLYADMN 809 >UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VUU0_9CLOT Length = 824 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 241/816 (29%), Positives = 377/816 (46%), Gaps = 88/816 (10%) Query: 2 PVAHVAL---PVPLPRTFDYLLPEGM--TVKAGCRVRVPFGK-QQERIGI---VVSVSDA 52 V VA+ + +DYL+P+ + + GCRV VPFG + R G+ V + Sbjct: 5 RVGKVAVENTAYHFDKAYDYLIPQTLWAKAEKGCRVLVPFGGGNRTRQGLLMDVEEIRAG 64 Query: 53 SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ------ 106 LK+V VLD P+ + + L W + Y + D + LP L Sbjct: 65 RTGSEEGLKSVKAVLDQTPLLSPEMLLLARWMKERYFCTLFDAVRVMLPAGLHYQVACSY 124 Query: 107 --GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAAL-------------RQGKIW 151 R + E+ L+ + ++ + L AL RQG + Sbjct: 125 QAARDIPPEKLEALGDEEKRLIAYLSRCRLPVRRDKLLTALGYEADNDLPEHMSRQGYLE 184 Query: 152 RDQVATLEFNDAALQ--ALRKKG------------------------------------- 172 + A + DA ++ L +KG Sbjct: 185 KIDDAFRKIGDAMVKMVRLTEKGETGGVKLSPKQREVFSLLQTVGAASVKEVCYFTGVTA 244 Query: 173 -----------LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA-- 219 C SE + E + L EQ A + + Sbjct: 245 GVVDALVKKGLACCFESERYRNPYDGAPESAVKEEIVLTQEQQRAYEEQLAQYQSPDGGI 304 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 LL GVTGSGKT V+L +++ + + ++MVPEI LTPQ +A F+ R+ V V HSG Sbjct: 305 SLLYGVTGSGKTSVFLKLIDRAVEDKRGVILMVPEISLTPQMLALFQRRYGRQVAVFHSG 364 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 L+ ERL W + KNG+A I +GTRSA+F PF+NLG+I++DEE + +YK ++ R+HAR+ Sbjct: 365 LSMGERLDEWKRVKNGDALIALGTRSAVFAPFENLGLIIMDEEQEYTYKSEQAPRFHARE 424 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV 399 +A +R + + L SATP++E+ Q+ Y L ++ R G A+ V D+ + + Sbjct: 425 IAKFRCRWHRCLLTLASATPSVESYYLAQKGVYSLSTISNRYGGAKLPRVVVADMNQELL 484 Query: 400 QAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 + + L+ + ++L+ Q IL LNRRG+ + C CG CP C T H Sbjct: 485 EGNTGPFSSVLMECLAENLRLRRQSILLLNRRGYHTFVNCRACGEPVTCPHCSISLTYHA 544 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 A L CH+C P +CPSC + G GT++ E+ + LFP I R+D DTT Sbjct: 545 ANRRLMCHYCGYSIPFTDECPSCHQRQVRYAGAGTQKAEEAVEELFPEARILRMDADTTM 604 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 K + E++L + G I++GTQM+AKG FP+VTLV +L D AL+S DFRS ER Sbjct: 605 AKYSHEKKLKQFADGEYDIMVGTQMVAKGLDFPNVTLVGVLSADQALYSDDFRSYERAFA 664 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L TQV GR+GR K+G V+QT+ PE+P++Q + Y AF + + R+ M PP+ Sbjct: 665 LLTQVVGRSGRGEKEGLAVIQTYTPENPVIQMAARQDYGAFFQGEIQMRKAMLYPPFADL 724 Query: 637 VIVRAEDHNNQHAPLFLQQLRNLIL---SSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 +V ++ + ++ + A + V+GP A PK GR+R+++++ Sbjct: 725 CVVGFSGQQEENVEQAARYFTRELIALAQAEYASLPMRVIGPAKAAVPKVSGRYRYKLII 784 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 ++ + +I L + K +D++P Sbjct: 785 KNRFDKSFRELIARLLRQYGKQKEYAKTSVFVDINP 820 >UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii KC4 RepID=C9RCL9_AMMDK Length = 730 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 273/742 (36%), Positives = 391/742 (52%), Gaps = 29/742 (3%) Query: 3 VAHVALPVPLP---RTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + VA+ +PLP + Y LP + K G RV VPF + + +G+VV + + + Sbjct: 1 MVQVAVALPLPPGKEVYSYRLPPQLAEKVIPGARVVVPF-RGRPVVGVVVELEEEIPEGV 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ELK ++ V +++P + RL W A+ Y +G+ L P +Y Sbjct: 60 KELKPIIRVEEAKP-LPPKLLRLGEWLAERYLCSLGEALLAL-------TAPPGEKEEYY 111 Query: 118 WFATEQGQAVDLNSL-KRSPKQQQALAALR--QGKIWRDQVATLEFNDAALQALRKKGLC 174 + A ++ + +L +R P Q +ALA + G + L AL +KGL Sbjct: 112 FPAEDRDLEETIEALSRRFPAQARALAVVVAFPGIDRLSLLREAGVKAQTLDALWRKGLV 171 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTE 232 E F + + L L QA A+ + A + T + LL GVTGSGKTE Sbjct: 172 R--KEKASFKALPFPFTPAETGLSLTPAQAKALSRVEEALNRKTPAVLLLHGVTGSGKTE 229 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VYL LAQG+Q +V+VPEI L Q + +FR RF V VLHS L + ER ++W + Sbjct: 230 VYLRAASLTLAQGRQVIVLVPEIVLAYQLVEQFRSRFGDRVAVLHSALGERERGTSWQRV 289 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 + GEA +VIG RSA+F P LG+IV+DEEH+ +YKQ++ RYHAR++A+ RA + + Sbjct: 290 ERGEAPVVIGARSAVFAPVSRLGLIVLDEEHEPAYKQEQVPRYHAREVALARAAQDGAVV 349 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---AGLAPALIT 409 +LGSATP+LET Y LL L +R + ++DL+ + + + L+ Sbjct: 350 LLGSATPSLETYARALAGHYELLELPQRVDGSPLPQVRLVDLREEYRRGMTGLFSRFLLK 409 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 R+++ L+ QVILFLNRRGFA +LC CG I CP CD T +Q L CH+C + Sbjct: 410 RIKEKLRLGEQVILFLNRRGFAAFVLCRSCGRILRCPHCDIALTFYQPD-LLLCHYCHYR 468 Query: 470 RPVPRQ-CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + CP CG L G GT++LE + LFP ++R+D +TTSR+G+ E L+ V Sbjct: 469 IRRQKLFCPYCGKGELELYGAGTQRLEAEVKSLFPEARVARLDAETTSRRGSHEAILSAV 528 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 R ILIGTQM+AKG P VTLV +++ D L DFR+AER QL QVAGRAGR Sbjct: 529 ARREVDILIGTQMVAKGLDLPGVTLVGVVNADVTLTLPDFRAAERTFQLLYQVAGRAGRG 588 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 G GEVV+Q+H PEH + + + FA + LA RR + PP++ V Sbjct: 589 GTPGEVVIQSHCPEHYAIYLSARQDFSTFARRELALRRRFEYPPFSHLARVVFTGAAENK 648 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 + R L+L+ A E++ VLGP P K G WRW I+L+ L+ I+ T Sbjct: 649 VRERALRFRELLLAE--AGEEITVLGPAPCPLGKLKGFWRWHIILKGRKAKPLREILRET 706 Query: 709 LALINTIPDSRKVKWVLDVDPI 730 + +VK LD+DP+ Sbjct: 707 VEQAKR-KAGAEVKIALDIDPL 727 >UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales RepID=B1MXU0_LEUCK Length = 806 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 224/640 (35%), Positives = 334/640 (52%), Gaps = 15/640 (2%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIW-----RDQVA 156 + + + A + + +LK + K+Q+ L G + RD A Sbjct: 168 VKVNNKANIKTQLAYQMSADIEFLENEYQALKTNAKKQRQLLTFILGHMGEKWSKRDLQA 227 Query: 157 TLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD- 215 L +DA L T L LN+EQ +A AI AAD Sbjct: 228 QLAVHDAVLNHAVTHQWLTKTRIEQLRDPLATVAVGPTSPLALNSEQQSAFEAIIHAADE 287 Query: 216 -TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 + +LL G+TGSGKTEVYL ++V QGK L +VPEI LTPQ + R + RF A Sbjct: 288 GQYQPFLLEGITGSGKTEVYLQAAQHVYNQGKTILFLVPEIALTPQMVQRVKSRFGAQTA 347 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR 334 VLHSGL+D ER W + + + IV+G RSA+F P ++LG+I++DEEH+++YKQ + R Sbjct: 348 VLHSGLSDGERYDEWRRIERDDVKIVVGARSAVFAPLRHLGLIIVDEEHETTYKQSDNPR 407 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLD 393 Y+ARD+A++R +IP++LGSATP+LET Q+ Y L +LT RA AR ++D Sbjct: 408 YNARDVALWRGEYHRIPVVLGSATPSLETRARAQRGVYALCQLTNRAAVGARLPQVEIID 467 Query: 394 LKGQKV---QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 +K + + L + L Q IL LNRRG++ ++C DCG++ P C+ Sbjct: 468 MKETLAAGPETNFSDQLRQALNDCLARGEQAILMLNRRGYSSFVMCRDCGYVPRDPNCNL 527 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 TLH L+CH+C + +P QC CGS + G GTE++E LA L P + R+ Sbjct: 528 AMTLHMDTKTLKCHYCGHEEAIPTQCAHCGSKRIRYYGTGTEKVEAELATLLPQARVIRM 587 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D+DTT +KG++ + L + A IL+GTQM+AKG F +VTLV +L+ D AL DF + Sbjct: 588 DQDTTRKKGSMTKMLTRFGQHEADILLGTQMIAKGLDFANVTLVGVLNADTALGLPDFHA 647 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 +ER QL TQV+GRAGRA K G+V +QT +P H + Y+ F +Q +A R Sbjct: 648 SERTFQLLTQVSGRAGRAKKAGKVFVQTFNPTHYAIAYAKNHDYEGFYQQEMAVRHAGNY 707 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 P+ + ++A + + Q+ + S A + +LGP P K R+ +Q Sbjct: 708 APYFYTIQIQASHTDENTIAKQMFQIVRWLKSR--ASNDVIILGPSPKPIAKLRNRYYFQ 765 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 I+L+ R + ++ D ++ +D DP+ Sbjct: 766 IILKFKQRDEMDVLLTTLYNRAQKAKD--DLQLSIDRDPV 803 Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats. Identities = 41/227 (18%), Positives = 82/227 (36%), Gaps = 24/227 (10%) Query: 2 PVAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A + + VP + + Y +P+ M ++AG RV VPFG + +G V+++ +++P Sbjct: 5 QFAQIIVDVPTMQTNQPYTYQVPDNMVGIIQAGMRVDVPFGGRHV-MGFVIALVSDTDVP 63 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 + +LK + +LD P + RL + A +L LP L+ + Sbjct: 64 VQQLKTITHILDLTPALNEELLRLSDYLAAETFAFRITILQTMLPNALKASYERILTLID 123 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 QQ+ L Q + T + + LR+ G ++ Sbjct: 124 EVDDDT---------------QQRLFKGLDQVTYQAREWTTEDIEK--ITRLRRAGKIEV 166 Query: 177 ASETPEFSDWRTNYAVS-GERLRLNTEQATAVGAIHSAADTFSAWLL 222 + ++ +T A + + A+ ++L Sbjct: 167 TVKVNNKANIKTQLAYQMSADIEFLENEYQALKTNAKKQRQLLTFIL 213 >UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S0_9FIRM Length = 809 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 235/810 (29%), Positives = 386/810 (47%), Gaps = 87/810 (10%) Query: 3 VAHVALPVPL----PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASEL 55 +A+V + L + +DY +PE + + G RV V FG+ + +V+ +S+ S+ Sbjct: 2 IANVLIDT-LGAIGDKIYDYKIPENLIDETEIGKRVLVYFGRGSNLVPALVIGLSETSDY 60 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 ++LK + E+LD E + + ++ + D Y D L +P L + R + Sbjct: 61 DNDKLKEINEILDDEVIVQSYLIDMIKYMRDNYFCTYVDALRCVIPSLEQVKRKEIYTYI 120 Query: 116 WYWFATEQGQAVDLNSLKRSP-----------------KQQQALAALRQGKIWRDQVATL 158 + L+ + + + ++ + L + I + +V Sbjct: 121 ENDKEIKDEYKYILDLIIKRKGEASFDYIKTKLKISKEELKEHIYYLSKRNIIKKEVIYH 180 Query: 159 EFND------------------------------AALQALRK---------------KGL 173 + + +++L K +G+ Sbjct: 181 VKEEKMNEIISLSGKYETIEEYLSCIRKNATKQVSVIKSLEKGPLLYETLIHKTEANRGI 240 Query: 174 C----DLASETPEFSDWRTNYAVS----GERLRLNTEQATAVGAIHSAADTFSAWLLAGV 225 DL EF + +S + + LN EQ + I+ + + +LL GV Sbjct: 241 ITKLEDLELIKSEFREKNDELDLSIPEEDKEVELNDEQKKVLN-IYLNEENTNKFLLHGV 299 Query: 226 TGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 TGSGKTEVY+ + + + +GKQ L +VPEI LTPQ + +F+ V ++HS L ++R Sbjct: 300 TGSGKTEVYIKMFKEQINKGKQCLFLVPEIALTPQMMRNIYYKFDGDVAIMHSKLTMAKR 359 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 + W K ++G+A IV+G RSALF PFK+LG+IVIDEEH+++YK + RY +LA + Sbjct: 360 IKEWDKVRSGKAKIVLGARSALFMPFKDLGLIVIDEEHENTYKSSQTPRYETIELANFIC 419 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV---QAG 402 ++LGSATP++E+ + +YRLL + RA ++D+ + ++ Sbjct: 420 DGIGAKLVLGSATPSVESYYKAFKGEYRLLEMENRANGKDFPEVQIVDMTDEMRSGNRSS 479 Query: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 ++ L ++R+ L Q+ILF+NRRGF+ + C CG+I ECP CD T H + LR Sbjct: 480 ISRTLSKKIRERLDRKEQIILFMNRRGFSTYVFCRKCGYIEECPNCDVSLTYHANTNSLR 539 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CH+C ++ P CPSCGS + G GT+++E + LFP I R+D DTT + G++E Sbjct: 540 CHYCGYEKRAPEVCPSCGSDKIKRAGTGTQKVEAAVRELFPDAKILRMDFDTTRKAGSME 599 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 + L++ A ILIGTQM+ KGH F +VTLV +L D AL D S +R QL TQ + Sbjct: 600 KILSDFREEKADILIGTQMVVKGHDFANVTLVGILLADTALNFPDINSPQRTFQLCTQAS 659 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGRA K+GEVV+QT+ P + L Y +F + R M PP+T + + Sbjct: 660 GRAGRASKEGEVVMQTYMPNNKTLVYSSMHDYKSFYAYDIEYRMKMNYPPFTEILGIFVA 719 Query: 643 DHNNQHAPLFLQQLRNLILS--SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 + + + + + I E + + P+ A K ++ ILL++ Sbjct: 720 NEDENKSVEHINHVYKRIEELLKEKNREDVKLYQPMDAFIHKLKNKYIMHILLRYNKDDE 779 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++ I I DS +V+P+ Sbjct: 780 IKKEIRNIFNDIKREVDSN---VFAEVNPV 806 >UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT87_9FIRM Length = 801 Score = 716 bits (1849), Expect = 0.0, Method: Composition-based stats. Identities = 210/620 (33%), Positives = 331/620 (53%), Gaps = 13/620 (2%) Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR----DQVATLEFNDAALQALRKKGLCD 175 E + + + RS K Q L L + +A + + ++L+ K G Sbjct: 183 PAESIKQIIQDLPARSQKVAQLLTYLLASGQPQWEQQALLAASQVSASSLKTALKHGYIK 242 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEV 233 + + L Q + A + +LL GVTGSGKTEV Sbjct: 243 SQKVSVYRDPLAHLEVEQSQSRTLTEAQKAVYEQVAQALEAHQDQTFLLEGVTGSGKTEV 302 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL ++ G+ A+++VPEI LTPQ + + + RF V VLHSGL +S++ W + Sbjct: 303 YLQLMAKASQMGRGAILLVPEIALTPQMVRQVKSRFQTGVAVLHSGLTNSQKYDEWRRII 362 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 G+A IV+G RS++F P ++LG+++IDEEH+++YKQ + RYHAR++A++R H Q P++ Sbjct: 363 RGQATIVVGARSSIFAPIRDLGLVIIDEEHETTYKQSDTPRYHAREVAIWRCHYHQAPLL 422 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---AGLAPALITR 410 LGSATP+LE+ Q +Y+ LRL R ++D+ + Q L+ L + Sbjct: 423 LGSATPSLESRSRAQVGRYQHLRLPERVNGRPLPPVTLVDMTKEMAQQTTDELSSVLKDK 482 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + L Q++L LNRRG+A +LC +CG + +CPRCD T H+ +H L+CH+CD Q Sbjct: 483 ITDRLAKGQQIVLLLNRRGYASYMLCRECGQVIQCPRCDISLTYHKHEHRLKCHYCDYQS 542 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 PVP +CP+C S +L GLGT+++E+ L FP + R+D DTT +KG E L R Sbjct: 543 PVPDRCPNCHSDYLRTFGLGTQKIEELLNQHFPDARVIRMDMDTTRKKGQHEALLDRFRR 602 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 A IL+GTQM+AKG F VTLV +++ D AL DFR+ E+ QL TQVAGR GR Sbjct: 603 HEADILLGTQMIAKGLDFEAVTLVGVINADTALNLPDFRAGEKTFQLLTQVAGRTGRGRF 662 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +GEV++QT++P+H ++Q Y++F + R + PP+ ++ A Sbjct: 663 EGEVLIQTYNPDHYVMQLAQQHDYESFFYYEMKRRHLGHYPPYFYTTLITISSKYQAKAQ 722 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 Q++ +L+S A L +LGP + R+ +Q+LL++ ++ + L Sbjct: 723 AMSHQVKQALLASGAA---LEILGPSQGAIARINERYYFQLLLKYKDGQVIKESLGAILD 779 Query: 711 LINTIPDSRKVKWVLDVDPI 730 + + + +D +P+ Sbjct: 780 QSQ-LEAKQGIYITIDHEPL 798 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 23/180 (12%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 V + +P + R FDY +PE +++ G RV+VPFG +Q +G VV + S+ Sbjct: 2 FVKVIVDIPAAQVNRPFDYQVPEAYQDSLQLGMRVQVPFGNRQ-LLGFVVGIHHTSDFK- 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 LK + VLD E + L A H +VL LP +L+ + Sbjct: 60 GTLKPITAVLDYESFINEELLDLSEHLAQTLHAFRINVLQAMLPAMLK-----VKYQNIF 114 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 QG + L Q ++ +DQV + + ++ L +G+ +L Sbjct: 115 LIHQPQGLSDYELPS----------DWLNQSQLDKDQVEA-QLSRKQIKQLLDQGVLELV 163 >UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MNQ4_CRYCD Length = 786 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 244/780 (31%), Positives = 371/780 (47%), Gaps = 57/780 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A V L +P L ++ Y + ++ G V VPFG + +G V+ + EL Sbjct: 9 MKFAQVVLDIPTQALEGSYVYAAHSDLGDIEVGSPVLVPFGGRSA-VGFVMKMLSLDELA 67 Query: 57 L-----------NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +++K + +L +F + A +Y P+ + P Sbjct: 68 PEAVEEALGCDSHKVKPITRLLGRS-LFPRESAACAQFLAQHYIAPLASCVRLFTPPGGV 126 Query: 106 QGRPAANAPMWYWFATEQGQ-----------AVDLNSLKRSPKQQQALAALRQGKIWRDQ 154 R WY G+ A + + K++ KQ+ +AAL G++ Sbjct: 127 P-RMVHGRDGWYLRDASVGKVDDRWVRLAVGAREFHPRKQAVKQRAIIAALDAGELRVAD 185 Query: 155 VATLEFN-DAALQALRKKGLCDLASETPEFSDWRTNYAVSG-----------ERLRLNTE 202 + + A L++L KG+ ++ S +N SG + L Sbjct: 186 LRAEYGSVSATLRSLATKGVIEIFSRRRMRGTSVSNTPTSGCDYGLCTLDAAHKPHLTPG 245 Query: 203 QATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 Q AV AI A S L+ GVTGSGKTEVYL +E V+ G+ A+V+VPEI LTPQ Sbjct: 246 QQRAVAAISKAFQAHSGQVVLVDGVTGSGKTEVYLRAIEEVVRSGRSAIVLVPEISLTPQ 305 Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 T+ARFR RF V VLHS + ER W ++GEA +++G RSALF P +LG+IVID Sbjct: 306 TVARFRGRFGDMVAVLHSRMGTGERFDQWDFIRSGEARVIVGARSALFAPVADLGLIVID 365 Query: 321 EEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK-YRLLRLTR 379 EEH++SYKQ RY RD+A + A ++LGSATP++E + VQ + + L Sbjct: 366 EEHEASYKQDSAPRYVTRDVAAWMARERGAALVLGSATPSIEAIFRVQHDPTWTAVELPE 425 Query: 380 RAGNARPAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 RA V+D+ + ++ + L +R+ L A N+ +L LN+RGFA +LC Sbjct: 426 RANGKPLPSIEVVDMAHEFSAGSRSMFSHRLQQALRETLTAGNKAVLMLNQRGFAQFVLC 485 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CG++ +CP C T H+ + L CHHC P CP CGS +L G GT+++E Sbjct: 486 RACGFVPQCPSCSTSLTFHEKGNVLMCHHCGFHMTTPAVCPQCGSPYLKRFGAGTQRVEA 545 Query: 497 TLAPLFPG-----VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 LA + G I R+D DTT+RKGA ++ L E A +L+GTQM+AKG F DV Sbjct: 546 ELASILAGFSDVDAHIVRMDADTTARKGAHQKLLEEFAAADAAVLLGTQMIAKGLDFDDV 605 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV +++ D L DFRSAER L QVAGR+GRA G V++QT+ +Q + Sbjct: 606 TLVGVINADTQLRLPDFRSAERTFDLIEQVAGRSGRAQLPGRVIVQTYSATSIAIQAAAH 665 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS--PLADEK 669 ++ L R+ + PP+ V + +L + + Sbjct: 666 YDRTSWLNHELESRKSLGYPPFVRLADVLVWGRDEAAVRREAGELYRRMTDAIDEHTQGD 725 Query: 670 LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +L P P + + G WR+ I ++ P+ + ++ + + ++ +D+DP Sbjct: 726 WTILAPTPCVLSRLRGSWRYHITVKAPATADIARVLT---PVFRSRRAMHELSVAVDIDP 782 >UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae RepID=B0TGS7_HELMI Length = 789 Score = 714 bits (1844), Expect = 0.0, Method: Composition-based stats. Identities = 249/746 (33%), Positives = 367/746 (49%), Gaps = 53/746 (7%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + +P L R F Y +PE + V+ G V V F + R ++ +EL Sbjct: 9 LAQVIVDIPHRDLDRVFHYRIPETLAGEVEPGREVWVAFHGKLTRGWVLELEVATAELER 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ--------GRP 109 VE ++ H + L+ W A DVL P Sbjct: 69 AFALQPVEAVNGSYRLGHDLLALVPWLARETLGTKADVLRLMAPPGPPVRPAAWVLLAAK 128 Query: 110 AANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA------ 163 + +W + A L L R+P+++ A+L +DA Sbjct: 129 PDREAIAFWEGIDPECADLLRRLSRAPQRRMKYASLTGKGGGVPPAVIDRLSDAGLVTVR 188 Query: 164 -ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLR-------------LNTEQATAVGA 209 L L ++ + A E ++ + A + L +Q AV Sbjct: 189 QLLPKLAERATMERAREKAHQTETIADPAAKPASITNSSALPPLFPEPALTPDQKQAVHY 248 Query: 210 IHSAADT------FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIA 263 + A D +LL GVTGSGKTEVY+ + LA+G+QAL++VPEI LTPQT Sbjct: 249 LTEALDAAGRGGDSRPFLLHGVTGSGKTEVYICAIREALARGRQALLLVPEIALTPQTER 308 Query: 264 RFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 R RERF + V +LHSGL D+ R W + GEA +V+G RSA+F P LG+I++DEEH Sbjct: 309 RLRERFGSQVALLHSGLADAARRQEWQRIYRGEADLVVGARSAVFAPLPRLGLIIVDEEH 368 Query: 324 DSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN 383 + SY+Q +YHAR+ A+ RA ++ GSATPALET +++LL+L +R Sbjct: 369 EPSYRQDNDLKYHARETAMERARHCGAVVVFGSATPALETYAQALSGRFQLLKLRQRPAG 428 Query: 384 ARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 + V+D++ + L+ L+ + + LQ QVIL+LNRRGF+ ++C +CG Sbjct: 429 GQLPPVDVIDMRDELAAGNKGMLSRYLLKAVEERLQRRQQVILYLNRRGFSTFVICRECG 488 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 + CP C H+ L CH+C+ ++ VP +CP C S + G GT+++E+ L Sbjct: 489 TVVTCPHCSISLVYHRHGEQLHCHYCNFRQDVPERCPHCRSRAIRYFGTGTQRIEEELRA 548 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 FPGVP+ R+DRD +++G + L RG A IL+GTQM+AKG FP VTLV +L D Sbjct: 549 RFPGVPVLRMDRDVAAQEG-IAPVLDAFGRGEAPILVGTQMIAKGLDFPRVTLVGVLAAD 607 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 +L +DFR+AER QL +QVAGRAGRA + G+VVLQT+ PEH LQ + Y+ F + Sbjct: 608 ASLHISDFRAAERTFQLLSQVAGRAGRAREPGQVVLQTYCPEHYCLQAVQLHDYEGFFRR 667 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI----------LSSPLADEKL 670 + R+ + PP+ V + ++ LSS LA ++ Sbjct: 668 EIELRQQLGYPPFARLARVLFSGPEEPLVRVAADTWAEILRQQAGAVTMGLSSGLAQPEI 727 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHP 696 V GP PA K R+RW + L+ Sbjct: 728 DVWGPAPAPVAKVENRFRWLLTLRVK 753 >UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna RepID=B0S138_FINM2 Length = 789 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 229/780 (29%), Positives = 384/780 (49%), Gaps = 72/780 (9%) Query: 13 PRTFDYLLPEGMTVKAGCRVRVPFGKQQE-RIGIVVSVSDASELPLNELKAVVEVLDSEP 71 R + Y V+ G RV VPFGK ++ +VV V++ ++ K ++ V+D P Sbjct: 15 NRLYSY--HSNEEVEVGMRVIVPFGKSNINKLALVVRVNENPNQDID-YKEIISVVDLNP 71 Query: 72 VFTHSVWRLLLWA-----ADY-----YHHPIG-------------------DVLFHALPI 102 + T + + +DY P G + L++ L Sbjct: 72 IVTQESIDIAFFMIDKYLSDYSSAFQTILPPGNFEELKEYFVANDKLNNVDEDLYNILKT 131 Query: 103 LLRQGRPAANAPMWYWFATEQGQAVDLN-------------------------SLKRSPK 137 + + + E + L KR+ Sbjct: 132 KKEYSEIKEISDISHKKLMEYVKFGLLKMDLVYDQKISPKLLKYVKLIDNNPVISKRANA 191 Query: 138 QQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 QQ+ + L++ ++ + +A + ++AL +K + + + + + S Sbjct: 192 QQKIVDMLKKESNILYSELLAKTNTTSSVVKALEEKKVVKIYFKEVDR--IVVDDTKSYH 249 Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 ++ LN++Q A +I + F+ LL GVTGSGKTEVYL ++E +L +GK ++V+VPEI Sbjct: 250 KISLNSQQENAYNSILE--NQFN--LLHGVTGSGKTEVYLHLVEKMLNEGKDSIVLVPEI 305 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 LTPQTI RF RF V ++HS LN +E+ + K NGE IV+G RSA+F+PFKNLG Sbjct: 306 SLTPQTIERFEGRFPGKVAIIHSKLNINEKFEQFRKMYNGEYKIVVGARSAVFSPFKNLG 365 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I+IDEEH++SY ++ +Y+A D++ +RA ++LGSATP +E N + +Y L+ Sbjct: 366 LIIIDEEHETSYVSEKNPKYNAIDISRFRAEYNNAKLLLGSATPGVEEYNNALKGQYNLI 425 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAP 432 + +RA N P ++D++ + + L+ +++++L Q ILFLN+RG Sbjct: 426 EMNKRANNTTPVDCTIVDMRKELETGNMRMFSKVLLNKIQENLNNKKQTILFLNKRGHTS 485 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C CG++ +C CD T H+ ++ L CH C P+ CP+CGS + G GT+ Sbjct: 486 FISCRRCGYVLKCDSCDVSMTYHKTKNRLICHMCGRTALKPKVCPNCGSKFIKEFGAGTQ 545 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 +LE+ LFP I R+DRDTT+ K E+ ++ ILIGTQML+KG FP+VT Sbjct: 546 KLEEETRELFPDARIVRMDRDTTNTKKDYEKIYDMMNNQEIDILIGTQMLSKGFDFPNVT 605 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV ++ D +L D++S E+ QL TQVAGRAGRA +G+V++QT+ P++ + + Sbjct: 606 LVGVMAADISLNLGDYKSNEKTFQLITQVAGRAGRAEYEGDVIIQTYKPDNFAITSAALH 665 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS--SPLADEKL 670 Y F E+ + R+ PP+ + + N A + ++ N + + Sbjct: 666 DYKMFYEKEIKLRKSFNYPPFYRILNINISSRNRNVAMKKINEVSNYVAALIRRYKLSTT 725 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPS-RVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + GP P+ + +R+ + + P+ ++ II L + + + +DP Sbjct: 726 LINGPHPSPIERINNMYRFDLYYKFPNGDDKIIEIIKKVLINNEYNINLEGITLKITLDP 785 >UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTV2_9BACT Length = 748 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 265/755 (35%), Positives = 371/755 (49%), Gaps = 34/755 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M A + LP+ P + + + EG+T+ G V VPFG+ + GIV + D + Sbjct: 1 MRYADIVLPLAQP-LYTFAVAEGVTLCEGMAVVVPFGRSKIYTGIVWRLHDRRP-DFKTV 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-------RPAANA 113 K V VL P+ R W ADYY +G+V+ ALP L++ Sbjct: 59 KTVSRVLYGTPLLDERQRRFWEWVADYYMCTLGEVMRVALPSLMKPSGHGEEEFAADEFR 118 Query: 114 PMWYWFATEQGQAVDLNSL--------KRSPKQQQALAALRQGKIWRDQVAT--LEFNDA 163 P WF G+A+ + L +R+P+Q++AL L +VA L + Sbjct: 119 PRREWFVALAGEALTADGLAAALERMGRRAPRQREALEELAALAPDGAEVARSRLAADRT 178 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 AL L KKGL E + L+ Q A I + + LL Sbjct: 179 ALALLVKKGLLTCIER--EVAPGPVTGGAQFRLPTLSAAQRKAAEEIRAVFADRATVLLR 236 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKTE+Y+ VLA+G Q L++VPEI LT Q + R R+ F V HS L D Sbjct: 237 GVTGSGKTEIYMHFAAEVLARGGQVLLLVPEIALTAQLVDRLRQVFGERVIAYHSKLTDR 296 Query: 284 ERLSAWLKAKNGEAA-IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLA 341 +R +L+ ++ +VIG RSA+F P + L ++V+DEEHD SYKQ + RY ARD A Sbjct: 297 KRTELYLRLRDSAGGELVIGARSAIFLPLRRLELVVVDEEHDPSYKQTDPAPRYQARDCA 356 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD----LKGQ 397 V +LGSATP+LE+ N KY + L R G +R V D +K Sbjct: 357 VLMTRLLGCRTLLGSATPSLESYLNAATGKYGSVVLAERYGPSRMPQILVSDTIRAVKRG 416 Query: 398 KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA 457 + A L+ RM + L Q +LF NRRGFAP + C +CGW A CP C+ TLH+ Sbjct: 417 ERHAHFNKLLLDRMEETLGGGGQAMLFQNRRGFAPYVECRECGWTARCPDCNVTLTLHKG 476 Query: 458 QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 + CH+C PVP +CP C T VP+G GTE++E+ +A +FP ++R+DRD+ + Sbjct: 477 SGRMVCHYCGHTEPVPAKCPHCRVTEPVPMGFGTEKVEEEIARVFPEARVARLDRDSVTS 536 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 + A Q + RG IL+GTQM+ KG F V LV +L+ D L + DFRSAER QL Sbjct: 537 ERAFRQIVEAFARGDDDILVGTQMITKGFDFGGVELVGVLNADNLLNNPDFRSAERAFQL 596 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 QVAGRAGR G VV+QT P HP+LQ ++ Y+A A Q LAER+ PP+ + Sbjct: 597 LMQVAGRAGRRENPGTVVIQTAEPGHPVLQQVIAGDYEAMARQQLAERKAFFYPPYARLL 656 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ--- 694 + + L + VLGP + G + +LL+ Sbjct: 657 NLLLRHRDPVTLRRAANALAAALRERF----GRRVLGPTAPPVDRVRGEYLATLLLKVEA 712 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 S R + + G L + P+ + V + DVDP Sbjct: 713 GASLARAREAVRGILDRVVKSPECKGVTILCDVDP 747 >UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID=C6JQJ7_FUSVA Length = 773 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 213/785 (27%), Positives = 372/785 (47%), Gaps = 68/785 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + YL E + G RV V F + +++ G++++ D SE ++ Sbjct: 1 MRYFKIYVDNTQS-LYTYL-DENEEYEIGDRVVVSF-RNRDKSGLIIA-EDNSENITFKV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + L++E + + +LL W YY V+ A+P L+ + Sbjct: 57 LPIKSRLENEIKLSENFIKLLRWIKTYYMSSYEQVISAAVPSDLKVKYDSVYVLSDIKNI 116 Query: 121 TEQGQAVDLNS------------------------------------------------- 131 + + Sbjct: 117 FKDEAEKIYSKEFIDFFKDRITITKATLNKKFTKEIINEMIADTILFNEKGSVKLNYDFD 176 Query: 132 -LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 K + A+ ++ + + + +F+ + L ++ L L E + R + Sbjct: 177 FSNLKEKFEDAVVYFQKKEEVQKKNLESKFSKELINKLIREKLLILKKNIKEDENQREIH 236 Query: 191 AVSGE----RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK 246 +S E + LN EQ A I + + + +LL G+TGSGKTEVY+ +++ GK Sbjct: 237 EISEEVSEKNVVLNEEQEKAKEIIKNGDNKY--YLLKGITGSGKTEVYIELIKEAFKNGK 294 Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 ++ +VPEI LTPQ I RFR F + +LHS L + ER W +G IV+G RSA Sbjct: 295 GSIFLVPEISLTPQMINRFRNEFRENIAILHSRLTNRERADEWYNIYSGNKKIVLGVRSA 354 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 +F P +NL I++DEEH+++YKQ RY+A+ +A+ R E +ILGSATP++E+ Sbjct: 355 IFAPVENLEYIILDEEHETTYKQDSNPRYNAKYVAIKRTELEGAKLILGSATPSIESSYY 414 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLN 426 ++ Y L+ + R N+ ++D+K ++ + L+ ++ L QVIL LN Sbjct: 415 AEKGIYTLVTMDSRYNNSILPEIEIVDMKKEE-DLYFSKKLLDEIKITLLKGEQVILLLN 473 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 R+G++ + C DCG + EC C + + +Q L+C++C R C CGST+L+ Sbjct: 474 RKGYSTYIQCKDCGHVEECTHCSIKSSYYASQGILKCNYCGQTRKYTGHCSKCGSTNLLH 533 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G G E++E+ + F V I R+D +++ K E+ + I+IGTQM++KG Sbjct: 534 SGKGVERVEEEIKKYF-DVRIIRVDSESSKNKDFYEKMYFDFLDKKYDIMIGTQMISKGL 592 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 HFP+VTLV +++ D L DFR+ E+ QL TQV+GRAGR K+G+V++QT+ PE+ Sbjct: 593 HFPNVTLVGVINADTILNFPDFRAGEKTFQLVTQVSGRAGRGEKKGKVIVQTYQPENYTF 652 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA 666 + + Y+ F + ++ R +++ PP++ + + + +F+++ I Sbjct: 653 RAIEKSDYNKFYSEEISNRELLEYPPFSKTINIGISSRKEKELEIFVKEFFKNI-----E 707 Query: 667 DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 DE + + GP+ +L + R+R+ I ++ S+ + + S + V+D Sbjct: 708 DENVEMYGPMRSLVYRVKDRFRYNIFIKG-SKKNISIFKRKLNKKLTDYKKSDDFRIVVD 766 Query: 727 VDPIE 731 VDPI Sbjct: 767 VDPIN 771 >UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID=C7NDX7_LEPBD Length = 760 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 218/761 (28%), Positives = 371/761 (48%), Gaps = 58/761 (7%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASE--LPLNELKAVVEVLDSEP 71 T+ Y E + G V F ++++GI++++ + ++ ++++K + D+ P Sbjct: 13 GTYTYKSEEKY--EIGQWCIVNF-INKDKMGIIIAIVNENQIQFDISKVKKIK---DAAP 66 Query: 72 VF--THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG-QAVD 128 V + +L+ W +YY V+ P L+ + + + Sbjct: 67 VLSIPSDIMQLIRWIKNYYISDYYSVIKAVYPGALKLNYSKKAIFQREFSENNETLEVEK 126 Query: 129 LNSLKRSP---KQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 + +K+ K++Q + + K + ++ N+ + ++ KK + + E Sbjct: 127 IEEIKKFNEYMKKRQEVTVVTLKKNFSSEIVERAVNEKVI-SIEKKVILNSKISKRE--- 182 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + + + + LN EQ AV I ++ + +LL G+TGSGKTE+Y+++++ L QG Sbjct: 183 -KGKSEIVEKEIILNDEQQKAVDTIKNSENQ--IFLLKGITGSGKTEIYINLIKEALKQG 239 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 ++ +VPEI LT Q I R E F+ V +LHS L D E+ W +NGE IVIG RS Sbjct: 240 FGSIFLVPEISLTVQMIQRLEEEFHNEVAILHSKLTDKEKREEWTFIRNGEKKIVIGARS 299 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA-------------------- 345 A+F P +NL I++DEEH+++YKQ+ RYH +++A+ RA Sbjct: 300 AVFAPVQNLKYIIVDEEHENTYKQENNPRYHVKNVAIKRAFLQNENLKKDEKLEKNSELE 359 Query: 346 -----------HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL 394 SE+I +ILGSATP+ ET QQ L+ LT+R NA+ ++DL Sbjct: 360 KNDNLEEAEIVKSEKIKVILGSATPSFETYYQAQQGDIELIELTKRYKNAKLPKFEIVDL 419 Query: 395 KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 + + L+ ++ Q LQ + QVIL LNR+ F+ L C DCG I CP C Sbjct: 420 N--ETTENFSEELLDKISQTLQKNEQVILILNRKAFSNLLKCKDCGNIPTCPNCSISLNY 477 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 ++ + L+CH+C ++ C CG + +G GTE++E+ LA FP I R+D ++ Sbjct: 478 YKYDNRLKCHYCGYEKRFDNTCDECGGHKMRQIGAGTEKIEEELAIAFPSAKIVRVDSES 537 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 K E+ + I++GTQ++AKG HF +VTLV +++ D L DFR++E+ Sbjct: 538 IKTKQNYEKAYNDFKNHKYDIMLGTQIIAKGLHFSNVTLVGVINADIILNFPDFRASEKT 597 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL TQ +GRAGR K GEV++QT + E+ +++ + Y+ + + + R+M+ PP+ Sbjct: 598 FQLLTQASGRAGRGEKDGEVIIQTFNGENDVIKKTIESDYEGYYKNEMIMRKMLNYPPFG 657 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW----VLGPVPALAPKRGGRWRWQ 690 +I+ + LR I + A L + + K GR+R+Q Sbjct: 658 RIIILVISATEENLVMEKAKILREEITRNVNATMNLTSNDFISDAFKSPIYKINGRYRYQ 717 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 I + L+ + +KV+ +DVDP+ Sbjct: 718 IFFKFERENILKIKKIIKKCVGKFREREKKVRITIDVDPVN 758 >UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB39_9FIRM Length = 697 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 231/721 (32%), Positives = 352/721 (48%), Gaps = 41/721 (5%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 L TF Y V+ GCRVRV F + +G V + S+ +K V+EV+D +P Sbjct: 12 LRNTFTYSC--EQDVEVGCRVRVEF-NNRTLVGFVEEIDVESDF--KNIKPVIEVIDEKP 66 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + + + L + AD+Y LP LR + + ++ Sbjct: 67 LLNNELKLLANYMADFYASSKVTCYKTMLPPALRPSSKHSKIIYEDYAVLKESNET---- 122 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 + +Q++ L + + + + + L +KG + + + + A Sbjct: 123 --LTSRQKEVLEMFSYPCKMSEL---RKVSPSITKVLLEKGYIGIEKRIKDSNTHVSEIA 177 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 L EQ A+ I S LL GVTGSGKTEV+L + ENVL+ GKQ L + Sbjct: 178 DVMHS--LTIEQKNAISKITST--EKMVSLLHGVTGSGKTEVFLRLAENVLSCGKQVLFL 233 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEIGLTP I R + RF + + HSGLN E+L + K+ + IV+GTRSA F PF Sbjct: 234 VPEIGLTPMMIQRVQARFKQKIAIYHSGLNAQEKLEQYNLVKDHKVDIVVGTRSACFMPF 293 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 +LG+I++DEEHDSSYKQ RYH RD+ ++RA + +IL SATP+LE+ + Sbjct: 294 SSLGLILMDEEHDSSYKQDNTPRYHTRDIVLFRASYHKCKVILASATPSLESYARAYKNV 353 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 Y L+ L R ++D+K +++ GL+ L+ + + L QVIL LNRRG+ Sbjct: 354 YELIELKNRIH--EMPEICLVDMKKERITNGLSETLLQAIHKRLSKKEQVILLLNRRGYL 411 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P + C DCG + CP C T H+ Q+ L CH C Q +CPSC S + G+GT Sbjct: 412 PVVRCSDCGHVRICPDCGVALTYHKNQNALVCHCCGRQFKFMEECPSCHSKNYFKAGMGT 471 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E+LE+ + +F + R+D D+T +K A E+ L E G +LIGTQM+AKG F V Sbjct: 472 ERLEEQIVEIFKDHHVVRMDADSTRKKNAHEKLLQEFEESG-DLLIGTQMVAKGLDFERV 530 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV +L+ D L D+R++E ++ Q +GR+GR +GEV++QT P+H ++Q + Sbjct: 531 TLVGILNADATLCRNDYRASETAYEMLEQASGRSGRGKLKGEVMIQTFDPDHFVMQCVKM 590 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW 671 Y F Q + R + PP+ + + A + S L Sbjct: 591 HDYKRFFNQEMQYRHLGMYPPYVYLCTLIFTHFDFNEAYKQASAAKEYFSS-------LR 643 Query: 672 VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD--P 729 VLGP+ + + R +++L+ L ++ L ++DV+ P Sbjct: 644 VLGPIE--IRMQQKKHRVRLILKSKDDKLLHELVQNYLDETKQ---------IVDVNMHP 692 Query: 730 I 730 I Sbjct: 693 I 693 >UniRef50_C3XBI2 Primosomal protein N' directs replication fork assembly at D-loops n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XBI2_OXAFO Length = 677 Score = 710 bits (1833), Expect = 0.0, Method: Composition-based stats. Identities = 281/741 (37%), Positives = 392/741 (52%), Gaps = 84/741 (11%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT----VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 + V L PL FDY P K G V VPFG+++E G++V V + SE+ N Sbjct: 6 IVQVVLDTPLDFYFDYRYPVEAENFPVPKIGMLVVVPFGRREE-AGLIVDVKEESEIDEN 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +LK VV V+ P L +AA YY P+G+V ALP + + R Sbjct: 65 KLKDVVSVISEIPPLRTDWIDLCRFAAGYYQRPLGEV---ALPSIPKNIRANKKL----- 116 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 +LKR+ ++AL + Sbjct: 117 ------------ALKRA-----------------------------VKALVQ-------- 127 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 A + E+ L Q AV AI F ++L GVTGSGKTE+YL + Sbjct: 128 ------VPGNIVATNMEKPVLLKAQEQAVSAIVKTRG-FKPFVLYGVTGSGKTEIYLQAI 180 Query: 239 ENVLAQG--KQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNG 295 E L Q Q L+MVPEI LTPQ R RF + LHS L +SERL WL+ G Sbjct: 181 EEKLKQSDAMQVLIMVPEINLTPQLEVSVRSRFPGVTIATLHSRLTESERLKNWLQIHTG 240 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 A IV+GTR A+ LG+IV+DEEHD SYKQQEG RY ARDLAV+RA+ IP++LG Sbjct: 241 VARIVLGTRLAILASMPQLGLIVVDEEHDPSYKQQEGLRYSARDLAVWRANQLGIPVVLG 300 Query: 356 SATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 SATP+LE+ +V +Y L L RA +A ++D + +Q G +P+LI +++ Sbjct: 301 SATPSLESWQHVLSGRYVKLELPERAVKDAVLPAIRLIDATREPLQNGFSPSLINAIKRR 360 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ Q +LFLNRRG+AP + C CGWI+ C RC Y H++ H LRCHHC +RP+PR Sbjct: 361 LEKSEQSLLFLNRRGYAPVITCEACGWISVCERCTAYMVYHKSHHLLRCHHCGLERPIPR 420 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP CG+ L +G GT+++E+ LA FP I RID D+T +KG+LE L VH+G Sbjct: 421 VCPDCGNIDLQTLGRGTQRIEEGLAGYFPDARILRIDADSTRKKGSLEAALEMVHKGEID 480 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA-----G 589 I+IGTQM++KGH F ++TLV +L+ D ALFS D+R+ ER QVAGRAGR G Sbjct: 481 IVIGTQMISKGHDFQNMTLVGVLNPDTALFSHDYRAGERLFSQLMQVAGRAGRGGVSEHG 540 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 + EV++QT +P HPL Q L Y + L ER+ LPP+ V++ AE ++A Sbjct: 541 NRSEVLIQTRYPMHPLYQAALTHDYGNYVSDLLMERQNAGLPPFGFQVLLFAEARKVENA 600 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 FL+Q + I E + + P+P + R Q+L++ SR RLQ ++ + Sbjct: 601 LDFLRQAIDAIPEP----EAVIINEPIPMAMMRIANVERAQLLIESTSRGRLQGMLKEWI 656 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 ++ + ++W ++VDP+ Sbjct: 657 PVLRNMKT--GIRWHIEVDPM 675 >UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GYC2_SORC5 Length = 807 Score = 708 bits (1829), Expect = 0.0, Method: Composition-based stats. Identities = 273/809 (33%), Positives = 404/809 (49%), Gaps = 84/809 (10%) Query: 1 MPV-AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASE-LP 56 MP+ A VA+PVPL + F Y +P + V+ G RV F +++ +G+V++VS+ S + Sbjct: 1 MPLLADVAVPVPLSQAFTYEVPAALAGEVRPGARVLCEFHRRK-LLGVVLAVSERSAAID 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 +++K + ++D+ P + L A YY PIG+VL ALP + R+ A A Sbjct: 60 PSKIKPLAALVDARPALPAELLAFLQELAAYYFAPIGEVLRLALPAIEREQVRALKAQGE 119 Query: 117 YWFATEQGQAVDLNSLK----------------RSPKQQQALAALRQGKIWRDQVA-TLE 159 + G+A + K R G+ ++ Sbjct: 120 LDGVLDLGRAKQVGGRKVAYASATDVVEEPGTLRGQAAAVLALLRANGEQPVARIEERFG 179 Query: 160 FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNT------------------ 201 +AL+ L ++ L L P + LN Sbjct: 180 NARSALKKLAERNLVTLDEREPPRDPFFRRAEERDVPPELNAAQAEAAARIDAALAALAP 239 Query: 202 ---------EQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 Q A SA+LL GVTGSGKTEVYL +++ L +G+ ALVMV Sbjct: 240 SGGGEHPAIAQQEPRPA--GQEPRPSAFLLFGVTGSGKTEVYLRAIKSCLDRGRGALVMV 297 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ +ARFR RF + VLHSGL+D++R + W G+ + IG RSALF P Sbjct: 298 PEIALTPQLVARFRARFGDELAVLHSGLSDADRHAMWASLHGGKVRVAIGARSALFAPVP 357 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 +LG+I++DEEHD S+KQ+EG RYHARD+A+ RAH +LGSATP++E++ V++ K Sbjct: 358 DLGLILVDEEHDGSFKQEEGVRYHARDMALLRAHRAGAVCVLGSATPSIESVALVRRGKL 417 Query: 373 RLLRLTRRAGN-ARPAIQHVLDLK----GQKVQAGLAPALITRMRQHLQADNQVILFLNR 427 LRL RA A ++DL+ G ++ L + + L A Q ILFLNR Sbjct: 418 AELRLPDRAHREASLPEVSLVDLRRFRAGPSGDPLISLPLHRALEKTLAAKEQAILFLNR 477 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQ-------------------------HHLR 462 RGFAP+++C CG + C C T H+ + LR Sbjct: 478 RGFAPSVVCGSCGTLTTCDACSVALTYHRGRRRDARPPSPGGAPAPAAPLDERPEGGRLR 537 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CH+CD P+P +C +CG+ +L+ GLGTE+LE T+A FP ++R+DRD + K + Sbjct: 538 CHYCDYAGPLPDRCGACGARNLLLEGLGTERLEATIAGSFPEARVARLDRD-VAGKDRSQ 596 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 LA++ G IL+GTQM+ KGH P+VTLV +++ D AL DFR+AER QL QVA Sbjct: 597 AILAKMREGKIDILVGTQMVTKGHDLPNVTLVGVVNADAALGLPDFRAAERGFQLLVQVA 656 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR + G V++QT +PEHP + F E+ + +R + PP T ++R + Sbjct: 657 GRAGRRDRPGRVLIQTRNPEHPAIAFAAAHDVPGFLEREIRDREEVGYPPATRLALLRID 716 Query: 643 DHNNQHAPLFLQQLRNLILSSPL-ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + +L + P A ++ VLGP A + GR+R+++LL+ R L Sbjct: 717 AVDESVGRGAAAKLAAHARTCPEGASRRVEVLGPSAAPIARLRGRYRFRVLLRARDRGPL 776 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + LI R + ++DVDP+ Sbjct: 777 RGALAALAGLIRDG-LDRNARVIIDVDPV 804 >UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID=B0U139_FRAP2 Length = 718 Score = 707 bits (1826), Expect = 0.0, Method: Composition-based stats. Identities = 268/732 (36%), Positives = 390/732 (53%), Gaps = 20/732 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VP DY + + V+ RV V G++Q IG +V+ + L +K Sbjct: 2 IVKVALAVPPSYLLDYSI-KDTNVELFSRVLVQVGERQ-LIGFIVAKDIKIDYELTRVKP 59 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 +++++D + +V RL+LW + YY + + + ALP + + Y + Sbjct: 60 ILKIIDQ--PISDAVQRLILWLSQYYCCDLYNAIRLALPNDFLKIEKVSPQKDTYVYLD- 116 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 ++L K + KQQ L + R + + + L K + + + Sbjct: 117 ---QIELQQHKLTSKQQDVLKIFANNEALRFEDLKELASSYVINKLLDKNILKKTYKLRQ 173 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + N S LN EQ A I S + F LL GVTGSGKTEVYL +++ L Sbjct: 174 SN----NTIESDLPKLLNPEQQYAFEQITSQSG-FKVSLLYGVTGSGKTEVYLHTIQSFL 228 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 A+ +Q LV+VPEI LTPQTI RF +RF + V LHS L+D RL+ WLK KNGEA IVI Sbjct: 229 AKSQQVLVLVPEINLTPQTIKRFEKRFIDKNVVALHSKLSDKTRLTNWLKIKNGEADIVI 288 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPA 360 TRS + FKNLG+I++DEEHDSSYKQQ RY+ARD+A++RA +P++LGSATP+ Sbjct: 289 ATRSGVLADFKNLGIIIVDEEHDSSYKQQTTTIRYNARDVAIFRASQLDVPVVLGSATPS 348 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 +++ N KY LL+L +RA N+ +LDLK V G++ L + + Q + Q Sbjct: 349 IQSYYNYLIGKYNLLKLNKRALNSHQNTIELLDLKSSIVDNGISNILFSLIEQSINDHQQ 408 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ-HHLRCHHCDSQRPVPRQCPSC 479 ++F+N+ GFA AL+C CG EC RCD YTLH +L CH C S++P+ CPSC Sbjct: 409 SLIFINKLGFAKALVCKGCGEAVECKRCDKPYTLHTHPYQYLECHFCGSRKPIVTACPSC 468 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 + L G GTE+++ + FP I R DR L ++ +++GT Sbjct: 469 NAEELFAYGSGTEKVQSRIEARFPYNKIVRFDRSNIKTMNDLHSINQMINDKQVDVIVGT 528 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM+AKGHHF ++TL L+++D L+S DF + ER AQ QV+GRAGRA K G ++LQT+ Sbjct: 529 QMIAKGHHFENITLAGLINIDAGLYSTDFHAIERTAQTIVQVSGRAGRADKPGRIILQTY 588 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 P++ LLQ L+ Y F + L +R+ PP+T + AE + L+Q+ Sbjct: 589 QPDNKLLQLLVNSDYLDFLDYLLEQRKYASYPPYTYQAQIIAESKDENKVLNMLEQIYLS 648 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + S + V P+PAL K+ +R+ ILL SR ++ II Sbjct: 649 LTDS----SGVQVSKPLPALHLKKNNVYRYSILLTSNSRSQINSIIKWIANTQIMSSLKN 704 Query: 720 KVKWVLDVDPIE 731 VK D+DPIE Sbjct: 705 SVKMYFDIDPIE 716 >UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepID=Q2JJJ7_SYNJB Length = 801 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 263/807 (32%), Positives = 380/807 (47%), Gaps = 95/807 (11%) Query: 8 LPVP-LPRTFDYLLPEGMTVKAGCRVRVPFGKQQE-RIGIVVSVSDASELPLNELKAVVE 65 + P L F Y +PEG +AG + VPFG+Q + + + + ++ + Sbjct: 3 VDHPHLGGCFTYRVPEGSAPEAGDLLSVPFGRQMAGAVALGWRSELPAGVDPQSVREIEA 62 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHA-----------------LPILLRQGR 108 V+ + W LL ADYY P+ V+ LP + Sbjct: 63 VVAKG-ILPKEFWPLLQRVADYYLTPLAQVVRTVLPPGLLSRSQRRVRLLRLPAEGEECS 121 Query: 109 PAANAPM------------WYWFATEQGQAVDLNSLKRSP-------------------- 136 PAA + Y A+ L L+R Sbjct: 122 PAAQTLLQLLQAKGGELSWRYVQQQVPTAALALRELQRRGWVESFWQEQQGGRVRTQLAA 181 Query: 137 ------------KQQQALAALRQGK---IWRDQVATLEFNDAALQALRKKGLCDLASETP 181 QQ+AL L+Q + + + A LQ L +KG L Sbjct: 182 SLADDSPEGLSLPQQKALQILKQKGGELLLAEWERLAGVSRAVLQGLARKGRVHLYERPL 241 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + L QA AV AI A F +LL GVTGSGKTEVYL V+ V Sbjct: 242 LRLGDASLPGWRDPPRPLTAAQAQAVEAIRQALGRFQRFLLHGVTGSGKTEVYLQVIAQV 301 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 L QG+ ALV+VPEIGLTPQ + RFR R + V HSGL++ ER W + + +VI Sbjct: 302 LQQGRSALVLVPEIGLTPQLMDRFRARLRSQVWAYHSGLSEGERYDTWRQMLSSTPQVVI 361 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPA 360 GTRSA+F P LG+IV+DEEHD S+KQ + YHAR +A +RA P++LGSATPA Sbjct: 362 GTRSAVFAPLSKLGLIVLDEEHDDSFKQDQPQPCYHARQVAEWRAELAGCPLVLGSATPA 421 Query: 361 LETLCNVQQKKYRLLR--LTRRAGN----ARPAIQHVLDLKGQKVQAG---LAPALITRM 411 +ET Q R +R L +R A ++D++ + L+ L + Sbjct: 422 VETYAAHLQDPQRWIRLALPQRIPQAGIPATLPQLELVDMRQELQAGNRSILSRRLHQAL 481 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL---HQAQHHLRCHHCDS 468 +Q L Q ILF+ RRG + +LC CG++ C CD T H LRCH+C + Sbjct: 482 QQTLDRGEQAILFVPRRGHSTFVLCRSCGFVLTCEHCDVSLTFHLAHLGGQELRCHYCGA 541 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 ++P P++CP+CGS +L G GT+++ + L +P + I R D D T RKG+ L + Sbjct: 542 RQPHPQRCPACGSPYLKHFGTGTQKVVEVLHQHWPQLSILRYDSDATRRKGSHRDLLEQF 601 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A++L+GTQML KG P VTLV ++ DG L AD+R+ ER QL TQVAGR+GR Sbjct: 602 RSGKAQVLVGTQMLTKGLDIPQVTLVGVMAADGLLHQADYRAGERSFQLLTQVAGRSGRG 661 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 G+ ++QT+ PEHP+L+ +L + Y+ F + L +RR PP + +++R + Sbjct: 662 SLPGQAIIQTYLPEHPILRAVLAQNYEGFLQAELQQRREGGYPPHRALILIRLSSTRLEA 721 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ-----HPSRVRLQH 703 + ++ + P VLGP PA + GR+RWQILL+ R +L Sbjct: 722 LERYCHRVAERLQGIPA-----EVLGPGPAQVERVAGRYRWQILLKQLPDQGWDRPKLAA 776 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPI 730 I + + ++ +DVDP+ Sbjct: 777 QIQAAIGH-----PPQGIRVSIDVDPL 798 >UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N540_SLAHD Length = 695 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 255/750 (34%), Positives = 370/750 (49%), Gaps = 78/750 (10%) Query: 1 MPVAHVALPV---PLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A V L + L ++ Y +P+ M V+ GC V V FG++Q +G V+SV+ E Sbjct: 1 MKTASVILDINTQSLDSSYTYAVPDDMEGVEVGCPVLVEFGRRQA-VGYVMSVAPLDEAD 59 Query: 57 L----NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 ++LK ++ VL E F L+ A Y P+ + P Sbjct: 60 ELPDASKLKPLLAVL-GESCFDEHAAALIEHMAYTYIAPLSSCIHLFTPAG--------- 109 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 R+PK ++ G WR Q Sbjct: 110 ---------------------RTPK------VVKDGDGWRLQKPAKR------------- 129 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF----SAWLLAGVTGS 228 + D S + L L Q A AI A D ++ GVTGS Sbjct: 130 ----RARKDAVDDGEPEVRTSNDDLSLTEGQKAAFDAISEAIDGKPDAGRCIVVDGVTGS 185 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVYL + VL G+ A+V+VPEI LTPQT+ARF+ RF V V+HS + ++R Sbjct: 186 GKTEVYLRSIGKVLEVGQGAIVLVPEIALTPQTVARFKGRFGNTVAVMHSNMTQAQRYDE 245 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W K GE +V+G RSALF P LG+I+IDEEH+S+YKQ+ RYHARD+AV+ Sbjct: 246 WTAVKRGERRVVVGARSALFAPVGRLGIIIIDEEHESTYKQESAPRYHARDIAVWLGDRL 305 Query: 349 QIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLA 404 IP++LGSATP++E+L K +R + L RA V+D+ + ++ + Sbjct: 306 GIPVVLGSATPSIESLHACATKPGWRKVDLPERANGKPMPDVEVVDMAKEFHSGSRSMFS 365 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 L + + + A ++ +L LN+RGFA +LC DCG++ ECP C T H+ +H L CH Sbjct: 366 KRLTQALFETVDAGHKAVLLLNQRGFANFMLCRDCGFVPECPTCSVSLTYHEVEHALICH 425 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG--VPISRIDRDTTSRKGALE 522 HC ++PVP +CP CGS +L G GT+++E L L G VP+ R+D DTTS + A E Sbjct: 426 HCGRRQPVPARCPECGSPYLRKFGAGTQRVESELKALLEGRDVPVIRMDSDTTSTRNAHE 485 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 + L R GA +L+GTQM+AKG F +VTLV +++ D L DFRSAER L QVA Sbjct: 486 ELLKRFARPGASVLLGTQMIAKGLDFDEVTLVGVINADTQLKLPDFRSAERTFDLIQQVA 545 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR G+V +QT+ E +Q + F L +R+M++ PP+ V Sbjct: 546 GRAGRGVFAGKVYVQTYVSESVAVQAAAHYDRKRFLIDELPKRKMLRYPPYARIADVLVW 605 Query: 643 DHNNQHAPLFLQQLRNLILSS-PLADEKLWV-LGPVPALAPKRGGRWRWQILLQHPSRVR 700 H+ Q Q L + ++ + WV G P L K +RW IL++ P+ Sbjct: 606 GHDAQEVQKAAQALAQRVEAALHDNGGEGWVSFGAAPCLLSKIRNMYRWHILVKAPAGAD 665 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + +++ ++ + S+ V DVDP+ Sbjct: 666 VSAVLS---PVMRSRKASKTVNVACDVDPL 692 >UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides RepID=Q3ZZA8_DEHSC Length = 815 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 260/826 (31%), Positives = 378/826 (45%), Gaps = 112/826 (13%) Query: 1 MPVAHVALPVPL--PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVS---------- 48 M A +A+ P+ P +F Y +P G+ +K G V PFG + GIV+ Sbjct: 1 MAFAELAVNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGP-KIVQGIVLEVSDQPAFGQT 59 Query: 49 ------VSDASELPLNEL----------------------------KAVVEV-LDSEPV- 72 +SD L ++L ++V + L+ P+ Sbjct: 60 REICGVISDTPLLSFHQLNLAAWISQTYLCSIYEALSPMLPPSFERRSVAYISLEPSPLN 119 Query: 73 --------FTHSVWRLLLWAADYYHHPIGD--------VLFHALPILLRQGRPAANAPMW 116 + S+ ++ W P + A+ L+ QG + Sbjct: 120 KSEKPPATLSPSLQKIFDWLQTRDITPQTELENIFGKKTTQTAILKLINQGLINRTYQIS 179 Query: 117 YWFATEQGQA------------VDLNSLKRSPKQQQALAALR---QGKIWRDQVATLEFN 161 + + D K SP+Q + LR QG ++ N Sbjct: 180 PVRTQTKFEKHFGLSEQALAFIKDQTLPKLSPRQTEVFECLRENPQGISKSRLNLLVKNN 239 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF---- 217 A L+AL KK L ++ + L+L+ Q + +I+ + +T Sbjct: 240 AAILKALEKKELILTEEHQVFRQPIDYSHIETLPHLKLSPPQEKCLESINRSLNTPPEDD 299 Query: 218 ---SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 +LL G+TGSGKTE+YL L L GK+A+V+VPEI LTPQTIARF RF V Sbjct: 300 QNPRTFLLHGITGSGKTEIYLQALAEALRLGKKAIVLVPEISLTPQTIARFAGRFPGRVA 359 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GW 333 VLHS L+ E+ W + KNG+A IVIG RSALF P G+I+IDEEH+ +YKQQ Sbjct: 360 VLHSRLSPGEQFDEWQRIKNGQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQNPQP 419 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR---AGNARPAIQH 390 RYH R +A+ ++LGSATP +++ Q Y+LL L R A Sbjct: 420 RYHTRTVALKMTEEYGAVLVLGSATPDIDSYFKAQNGLYQLLELPERLTPYRGASLPKTE 479 Query: 391 VLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 ++D++ + + + L + + L Q ILF+NRRG A + C DCG++A C Sbjct: 480 LVDMRTELSEGNRSIFSRNLHASIEKVLAKHEQAILFINRRGGASFIQCRDCGYVAMCKS 539 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T H Q +L CH C P P CP+C S + +G+GT++LE+ FP + Sbjct: 540 CDTPLTYHPDQENLVCHQCGRHYPNPLTCPNCKSRRIKYLGMGTQKLEEETGLAFPQAKL 599 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R D D T K + +Q + + R A ILIGTQM+AKG P VTLV +++ D +L D Sbjct: 600 LRWDSDVTKGKDSHQQIMDKFSRHQADILIGTQMVAKGLDLPGVTLVGVINADISLNLPD 659 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FR+ ER QL QVAGRAGR G+VV+QT+ PE+ +Q+ + Y F + +A RR Sbjct: 660 FRAGERTFQLLAQVAGRAGRGLAGGKVVIQTYTPENYAIQSAVCHDYPGFYAKEIAYRRE 719 Query: 628 MQLPPWTSHVIVRAEDHN----NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKR 683 + PP+ + N Q A L Q LR S+ L +LGP PA + Sbjct: 720 LNNPPFQKLACLVFSHLNHDFCQQQAILLAQTLREKADSA--GSGTLEILGPAPAFIQRL 777 Query: 684 GGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 GR+R+QI+L+ P+ IN W +D+DP Sbjct: 778 RGRYRYQIILRSPNPANFLRDINLGQG------------WSIDIDP 811 >UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae RepID=C3WCB2_FUSMR Length = 769 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 211/781 (27%), Positives = 373/781 (47%), Gaps = 64/781 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + Y + G RV + F + ++R G++++ D +E + Sbjct: 1 MRYYKIYVDN-TRELYTYE-DREDKYEVGDRVIISF-RGKQRTGLIIA-QDTNEEKNYRV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL--LRQGRPAANAPMWYW 118 + + +++ + + +LL+W +YY V+ A+P ++ + + + Sbjct: 57 LPIQKRMENSIKLSENYIKLLVWIKNYYMSSYEQVITSAIPSGLSVKYEKFYFPRDIVEF 116 Query: 119 FATEQGQAVDLNSLKRSPK----------------------------------------- 137 TE ++ Sbjct: 117 LDTEVISPEIREYFRKRVSITKGALSKNFGLDKINSLLKSGLLLKDGKVNIVVDYSKILD 176 Query: 138 ----QQQALAALRQGKIWRDQVATLEFNDAALQALRKKG---LCDLASETPEFSDWRTNY 190 ++ ++ + +++ F L+ L K G L E + Sbjct: 177 LELVEKNIYEYFKRREKVKEETLEKIFPKKELEKLLKAGDLRLEKFIKAEEEKVEEIDEI 236 Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 + LN EQ A I S + +LL GVTGSGKTEVY+S++++ +GK ++ Sbjct: 237 EIESRDRELNEEQKKARETIISGIE--KNYLLKGVTGSGKTEVYISIIKSAFNKGKGSIF 294 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQ I RF+ F + +LHS L SER W G+ IV+G RSA+F P Sbjct: 295 LVPEISLTPQMINRFKGEFKENIAILHSKLTASERAKEWYNIYIGKKKIVLGVRSAIFAP 354 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 +NLG I +DEEH+++YKQ RY+A+ +A+ RA E +ILGSATP++ET Q+ Sbjct: 355 VENLGYIFLDEEHETTYKQDNNPRYNAKQVAIKRAELEGAKLILGSATPSIETYYFSQKN 414 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGF 430 ++L+ L R NA ++D+KG++ + L+ +R+ L QV+L LNR+G+ Sbjct: 415 LFKLVELKNRYNNALLPEIEIVDMKGEESI-YFSKRLLEEIRKTLLKGEQVLLLLNRKGY 473 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 + + C DCG++ EC C Y+ + +Q L+C++C + C CGS++L+ G G Sbjct: 474 STYIQCKDCGYVEECSHCSIKYSYYASQGVLKCNYCGRVKKYTGHCSKCGSSNLIHSGKG 533 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 E++E+ + F V + R+D + + + E+ + I++GTQ+++KG HFP+ Sbjct: 534 VERVEEEIKKYF-DVRVIRVDSEMSKDREFFEKMYFDFLEKKYDIMVGTQLISKGLHFPN 592 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +++ D L DFR+ E+ QL TQVAGRAGR K+G V++QT+ EHP+ + + Sbjct: 593 VTLVGVVNADTILNFPDFRAGEKTFQLVTQVAGRAGRGDKKGRVIVQTYQSEHPVFKRVK 652 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 Y+ F + + R +++ PP++ + + ++ F+Q I + + Sbjct: 653 ESDYEGFYSEEIGNRELLEYPPFSKTINIGISSKYEKYLENFVQDFYRDIKY-----DGV 707 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + GP+ ++ K R+R+ I ++ S + + I + K++ V+D+DPI Sbjct: 708 ELYGPMRSMVYKVKDRYRYNIFIKG-SIKEINNFKKKLKLKITNYEKNDKIRIVIDIDPI 766 Query: 731 E 731 Sbjct: 767 N 767 >UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii RepID=B6J9B5_COXB1 Length = 662 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 278/569 (48%), Positives = 378/569 (66%), Gaps = 11/569 (1%) Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 +L L ++G ++ + E + + L LN Q AV I ++ F +LL Sbjct: 103 GSLPRLFRQGKTIISEKIEELNQ------AAPPSLELNEYQQNAVNQIMASKG-FQTFLL 155 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 AGVTGSGKTEVYL +E ++ Q KQAL++VPEIGLTPQT+ RFRERFN P VLHS L D Sbjct: 156 AGVTGSGKTEVYLRCIEKLIQQEKQALILVPEIGLTPQTLNRFRERFNVPTAVLHSSLTD 215 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 +R AW+ AK G A IVIGTRSA+FTP N G+I++DEEHD+S+KQQ G+RY ARDLAV Sbjct: 216 KKRAQAWMMAKRGTAKIVIGTRSAIFTPLLNPGIIILDEEHDTSFKQQSGFRYSARDLAV 275 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 R E IP++LGSATP+LE+L NV++++Y+LL L RAG A+ ++DL+ +K+ AG Sbjct: 276 MRGQFENIPVVLGSATPSLESLYNVERRRYQLLSLPGRAGKAKLPSLTIVDLRQKKLIAG 335 Query: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 ++ L+ + +H++ QV+LFLNRRG+AP LLCH CGW+ C RCD TLH L Sbjct: 336 MSEDLLISIEKHIKNKGQVLLFLNRRGYAPTLLCHGCGWVMHCDRCDARLTLHHFPKRLY 395 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CHHC + + +P CP C L+ VGLGTE+LE L FP I RIDRD+T K ++E Sbjct: 396 CHHCGAAKKIPPTCPQCHQQELIDVGLGTERLEAALQQRFPNDDIVRIDRDSTRTKNSME 455 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 +L +H A ILIGTQM+AKGHHF +TLVA++D D L+SADFR+ ER QL TQVA Sbjct: 456 NKLNLIHNREAPILIGTQMIAKGHHFSHLTLVAIIDADSGLYSADFRATERMGQLLTQVA 515 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR +QGEV++QTH P +P L LL +GY+AFA+ L ER++ QLPP+T ++R E Sbjct: 516 GRAGRVDRQGEVLIQTHQPNNPFLTLLLQEGYEAFAQALLKERQLAQLPPFTYLALLRTE 575 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 FL +++ L+++ E++ +LGPVPA ++ GR+R+Q+L Q R L Sbjct: 576 AVKQNLPLDFLTKIKELMVNEL--KEEVDLLGPVPAGMERKAGRYRYQLLFQSKHRKHLH 633 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++N ++L+ T KV+W LD+DP E Sbjct: 634 SVLNKLISLLATQRT--KVRWSLDIDPQE 660 >UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MD21_RHOM4 Length = 828 Score = 700 bits (1807), Expect = 0.0, Method: Composition-based stats. Identities = 257/720 (35%), Positives = 365/720 (50%), Gaps = 36/720 (5%) Query: 38 KQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT-HSVWRLLLWAADYYHHPIGDV- 95 +++ G +E P AV+ + P T + + L +A+ H + Sbjct: 113 RRRLYPG-----HPPAEPPGERAAAVLRFVAEHPGTTIRRLRQELRFASYALLHRLVARG 167 Query: 96 ---LFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQ----- 147 L +L Q + + + T Q L L R +Q+ + AL+ Sbjct: 168 WLQLEESLEAPRVQIKKEQHVRFAPAYRTPAAQEAVLEKL-RGARQRALVTALQALRLEG 226 Query: 148 --GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQAT 205 + +A + + A L+ L + G+ +L + S + + EQ Sbjct: 227 VAEPTRAELLARADASPATLRRLVELGVLELVEKEVIRSPLEAEPVPKAAPVTFHPEQQA 286 Query: 206 AVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIA 263 A+ I A + F +LL GVTGSGKTEVY++ L+ V AQG+ +++VPEI LTPQT+ Sbjct: 287 ALDRITEAIEARRFETFLLHGVTGSGKTEVYIAALKRVRAQGRTGIILVPEIALTPQTVR 346 Query: 264 RFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 RFR F V VLHS ++D ER W + + G IVIG RSA+ P +NLG+IV+DEEH Sbjct: 347 RFRAHFGDEVAVLHSRMSDGERYDTWRQLRAGRYPIVIGPRSAVLAPLENLGLIVVDEEH 406 Query: 324 DSSYKQ-QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG 382 + SYKQ RYHARD+AVYRA+ +LGSATP+LE+ N + KY LL + RRA Sbjct: 407 ERSYKQFDPAPRYHARDVAVYRAYLNGAVCVLGSATPSLESYLNARSGKYTLLEMRRRAP 466 Query: 383 N-----ARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 AR ++DL+ ++ G LAP L + Q L+ QVIL NRRGFAP L Sbjct: 467 AVGHTPARLPSVRLVDLRHTRLVNGNPLAPPLARAIAQRLERGEQVILLQNRRGFAPVLE 526 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C +CGW CP C T H+ QH LRCH+C P C CG+ L P+G+GT+++E Sbjct: 527 CAECGWSPHCPHCSVTLTYHKVQHQLRCHYCGYATRHPGTCRQCGAAALEPLGIGTQRVE 586 Query: 496 QTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 + L LFP + R+D DTT + A + L RG A IL+GTQM+AKG FP VTLV Sbjct: 587 EALRALFPEARVLRMDLDTTRGRRAHHRLLDRFARGEADILLGTQMVAKGLDFPRVTLVG 646 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYD 615 +++ D L DFR+ E QL QVAGRAGRA + GEV+LQT +P+H + + LL Y Sbjct: 647 VVNADTGLLLPDFRADEHTFQLLMQVAGRAGRADRPGEVLLQTRNPDHRVFRYLLRHDYA 706 Query: 616 AFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS---SPLADEKLWV 672 A + LAER + PP+ ++ + + + Sbjct: 707 GLARELLAERHQLGYPPYARLAVLECSGPDEARVAELARSWTEHFQQVCHQHAGGHLIDT 766 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRV---RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 LGP PAL + GR+R+ +L++ P R LQ ++ L P R + LD+DP Sbjct: 767 LGPTPALHERLKGRYRYHVLVKVPRRTGAPPLQPLLRQALETF--PPLPRAYRLTLDIDP 824 Score = 128 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 83/225 (36%), Gaps = 15/225 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEG--MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + VALP+PL + F Y +P V+ GCRV VPFG++ G+VV LP Sbjct: 7 IVQVALPLPLLQVFSYRVPPEWREAVRPGCRVLVPFGRRH-LTGVVVPELPPDPLPSPLK 65 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 +++VLD P T + RL W ADYY G+V+ ALP L + Sbjct: 66 -PILDVLDDTPALTDELLRLTRWMADYYVCGWGEVIRAALPPGLE---------IESRRR 115 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS-- 178 G +R+ + +A I R + + A L L +G L Sbjct: 116 LYPGHPPAEPPGERAAAVLRFVAEHPGTTIRRLRQELRFASYALLHRLVARGWLQLEESL 175 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 E P + + R Q + + A L Sbjct: 176 EAPRVQIKKEQHVRFAPAYRTPAAQEAVLEKLRGARQRALVTALQ 220 >UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID=C9KIM0_9FIRM Length = 828 Score = 698 bits (1801), Expect = 0.0, Method: Composition-based stats. Identities = 241/811 (29%), Positives = 377/811 (46%), Gaps = 90/811 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGI----------- 45 M A V + +P + R + Y +PE ++ ++AG RV VPFG ++ + Sbjct: 24 MKTADVFVNIPVKSIARAYTYRVPEELSKIEAGWRVFVPFGSRKVEGFVVETHELAAAPE 83 Query: 46 ------VVSVSDASELPLNELKAVVEVLDSEPVFT-HSVWRLL------LWAADYYHHPI 92 V++ D ++ + L + + + RL L Y Sbjct: 84 NITLKDVIAAVDEECWFSPQMIEIARWLSDFYLCSLAEIMRLFMPGKSGLRITVRYEADE 143 Query: 93 GDV---------------------------LFHALPILLRQGRPAANAPMWYWFATEQGQ 125 L ALP + + Y + + Sbjct: 144 SQPDHMMLAMRGCRAIYDTLLREGPQKKAELRRALPEWQEELDDLLAKLLKYHIVRKVYE 203 Query: 126 AVD--------------------LNSLKRSPKQQQALAALRQGK-IWRDQVATLEFNDAA 164 A L+S +R Q L L+Q + + + A Sbjct: 204 AQKRDAAQYEKIVVLCGEVTPGLLDSYRRKKAQAHLLELLQQTPEVPLAALKAQHVSLAT 263 Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLL 222 + L GL ++ +R + S E + L +Q V ++ A D + +LL Sbjct: 264 VHNLEAAGLAEIRQRRVLRDSYR-DARASKEEVALTEDQQQVVAQVYPAIDAARYQGFLL 322 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKT+VY+ + E V A G++ +V+VPEI LT Q + F+ F + V+HS L+ Sbjct: 323 KGVTGSGKTQVYIELAERVRAAGRRVIVLVPEIALTGQVVMAFKSYFPDDLVVVHSRLSL 382 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 +ER A L+ + EA I+IG RSALFTP ++G++++DEE D SYKQ E RYHAR +A Sbjct: 383 AERNDAILRVRRNEAGIIIGARSALFTPADDIGLVILDEEQDMSYKQDESPRYHARVVAE 442 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 A ++LGSATP+LE+ Q + LL + RR G+ + H +D++ + Sbjct: 443 KIARVHGAVLLLGSATPSLESYFRAAQGELTLLVMPRRIGDIPLPVIHCVDMRQELRMGN 502 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 ++ AL + + + QVI+ LNRRGF+ ++C CG + C C H+ Sbjct: 503 RHIISRALQELIEKTIARHQQVIIMLNRRGFSTFVMCRSCGEVIRCRHCGLPLVYHR-NG 561 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L+CHHCD Q PVP CP CGS ++ G GTE+LEQ LA L P + R+DRDTT+ K Sbjct: 562 QLKCHHCDVQEPVPDVCPKCGSRYIKYFGSGTEKLEQELAALVPSARVIRMDRDTTTTKF 621 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 A ++ L RG IL+GTQM+AKGH P+VT V ++ D +L DFR+AER L T Sbjct: 622 AHQEILESFRRGEYDILLGTQMVAKGHDIPNVTAVGIISADSSLNMPDFRAAERCFMLIT 681 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 Q AGRAGR +G+VV+QT++P H + + + Y+ F + +A R+ + PP++ V + Sbjct: 682 QTAGRAGRHETRGQVVIQTYNPTHYAVTCGIRQDYEGFFHKEIALRQELFYPPYSRLVKL 741 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 ++ + A + L + E V+GP PA+ G +R+ +L++ Sbjct: 742 LYQNASEVKAKAEAEALVKSFELAFAGREGHQVIGPAPAVIACFRGIYRFVVLIKTADLP 801 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + + +D+DPI Sbjct: 802 AVHDFLKEQQLHLRAD-------VAIDIDPI 825 >UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE7_9FIRM Length = 781 Score = 696 bits (1797), Expect = 0.0, Method: Composition-based stats. Identities = 224/780 (28%), Positives = 377/780 (48%), Gaps = 80/780 (10%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP-LNELKAVVEVLDSE 70 + + Y+ + + +K G RV V FG R+GIV+ + P L++LK +++VLD+E Sbjct: 14 IDNLYTYIFDKDIYLKPGMRVMVSFGNG-TRVGIVLKIYSTYNGPYLSKLKNIIDVLDAE 72 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT--EQGQAVD 128 P+ + + L LW D Y LP + + Y + E + ++ Sbjct: 73 PIISEDLIELGLWMKDRYLLGYSKAFAPLLPPGDLKKIKKSVNIKKYPYGQDLEDLKKIN 132 Query: 129 LNSLKR---------------------------------------------------SPK 137 L+ L + + Sbjct: 133 LDKLYEDMDSNMKNLCNKLYKKGILKFSYLPITSIKIKTEKYLKKSNNFSMEKLQGLTKR 192 Query: 138 QQQALAALRQGKIWRDQV--ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 Q QA+ + + K ++ L+ + ++AL KK L + + G Sbjct: 193 QSQAVNYIIEKKDVSKKLLMKELKMSSTPIEALIKKDLVTEFDREVKTD--KKYVGKVGT 250 Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 LN EQ A+ +I +L G+TGSGKTEVYL++ + L +G+ +V+VPEI Sbjct: 251 NHTLNEEQEDAIRSIEGT--KKEVSILYGLTGSGKTEVYLNLAKIALDRGEDVIVLVPEI 308 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 GLT Q I RFR +F V ++HS L+ +R + K NG+ IV+G RSA+F PF N Sbjct: 309 GLTSQMIERFRNKFQDDVAIIHSKLSKGQRYEEYRKILNGDVHIVVGVRSAVFVPFTNCS 368 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I++DE HDSSY + +Y + ++A+ R ++ ++LGSATP + QQ KY L Sbjct: 369 LIILDEFHDSSYTFHDSLKYDSIEVAIKRMENKG-KVVLGSATPDISHYYLAQQGKYNLS 427 Query: 376 RLTRRA-GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFA 431 L RA +R ++D++ + + + AL ++++ L + Q+ILFLNRRGF+ Sbjct: 428 CLKNRAFHGSRLPDTKIIDMRKELLMGNLSIFSRALKDKIKEKLDKNEQIILFLNRRGFS 487 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 + C CG + +C CD T H+ + L CH+C + +P+ CPSCGS ++ GLGT Sbjct: 488 NFVSCRTCGHVIKCDNCDISMTYHKTNNRLICHYCGYTKSLPKICPSCGSKYIKQFGLGT 547 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 +++E+ + FP I R+D+DTTS+K + E + ++IGTQM++KG FPDV Sbjct: 548 QKVEEEVKKFFPNARILRMDKDTTSKKDSYENYYHMIKNKEVDVIIGTQMISKGFDFPDV 607 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV ++ D +L+ + ++S+E QL TQV+GRAGR+ K+G+V++Q+++P H + Sbjct: 608 TLVGVIASDISLYISSYKSSEDTFQLITQVSGRAGRSYKKGDVIIQSYNPNHYAIMYAAD 667 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ----LRNLILSSPLAD 667 Y+ F ++ L ERR PP++ + + + A + + +I + + Sbjct: 668 NSYEGFYKEELEERRTFLYPPFSKIINLEFSSVYEKLAIKWANAYLYNIGKIIGNLDVQA 727 Query: 668 EKLWVLGPVPALAPKRGGRWRWQILLQH--PSRVRLQHIINGTLALINTIPDSRKVKWVL 725 K+ L PK +R L+ L ++ + I+ I D + + + Sbjct: 728 TKIIKL-------PKIKNMYRIHFSLKVFPQDEQMLLKVLRRVIN-ISKINDKKDIDLNI 779 >UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8Z6_9ACTN Length = 841 Score = 696 bits (1796), Expect = 0.0, Method: Composition-based stats. Identities = 248/794 (31%), Positives = 377/794 (47%), Gaps = 73/794 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSD------ 51 V + +P L F Y +P + + G V VPFG++ E G VV+ S+ Sbjct: 48 YVSVVIDIPARALSEPFAYGVPLALDGVCQVGATVLVPFGRRVE-AGYVVARSESLGKLP 106 Query: 52 -ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG--- 107 A L +K V EV+ + F+ + L W + Y P+ + L LP Sbjct: 107 GAEGLEPFRIKPVREVVAAP-AFSAASAELAFWMSREYVAPLSECLRLLLPPGGAGKVVR 165 Query: 108 --------RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE 159 P + + + + +R+ +Q+Q + AL G + ++ + Sbjct: 166 REDGSYAYEPPTVTSVTVRWVSLTEEGRSFEPAERAVRQRQLIDALSCGPVTTRELNLMN 225 Query: 160 FN-DAALQALRKKGLCDLASETPEFSDWRTNY---AVSGERLRLNTEQATAVGAIHSAAD 215 + A +++L K+G+ + + A + L Q A+ AI A + Sbjct: 226 GDLSATIRSLEKRGVVTVEERRSWRGCEGSTTLSSANASAPKELTAGQQNALDAIARATE 285 Query: 216 --TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 + L+ GVTGSGKTEVYL+ +E VLA G+ A V+VPEI LT QT+ RFR RF V Sbjct: 286 AASGDVVLVDGVTGSGKTEVYLTAIERVLAHGRSACVLVPEISLTAQTVGRFRSRFGDAV 345 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 V HS L+ ERL W ++G A +V+G RSALF P +LG+IVIDEEH+ SYKQ Sbjct: 346 AVFHSRLSAGERLDQWDMVRSGAARVVVGARSALFCPLADLGLIVIDEEHEQSYKQGSSP 405 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK-----KYRLLRLTRRAGNARPAI 388 RYHAR++A A ++LGSATP+ E L + ++ + + R G AR Sbjct: 406 RYHAREVAAKLAQLHGCALVLGSATPSAEALARCEAGGHGGARWTRVEMPERPGTARLPE 465 Query: 389 QHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 V DL+ + ++ + L+ + + ++ + +L NRRGFA L+C +CG + C Sbjct: 466 VIVADLRREFASGSRSIFSKPLLDALDEVVERRQKAVLLHNRRGFASFLMCRECGCVPTC 525 Query: 446 PRCDHYYTLHQAQHHLRCHHCDSQ---RPVP---RQCPSCGSTHLVPVGLGTEQLEQTLA 499 C T H+ H L CH C S RP P CP CGS +L +GLGT+Q+E L Sbjct: 526 KHCSTALTYHERTHTLECHTCGSSYRVRPYPEYGSACPKCGSRYLAKMGLGTQQVEDALR 585 Query: 500 PLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 L P V + R+D D+T KGA ++ L + +L+GTQM+AKG FP+VTLV +++ Sbjct: 586 ALLPEDVAVIRMDADSTRTKGAHQKLLEQFDAAECAVLLGTQMIAKGLDFPEVTLVGVIN 645 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D AL DFR+ ER L QVAGRAGR G V++QT+ P+ P+++ + F Sbjct: 646 ADYALKMPDFRAGERAFDLLEQVAGRAGRGEAPGRVIIQTYLPDEPVIRAVKTHDRSVFT 705 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL----------------- 661 E L RR PP+ V + + A + ++ + Sbjct: 706 EHDLGMRREALYPPYVRLANVLVWGKDERAARGLVMRIAEELRVEFGLDAAPMLRPVVET 765 Query: 662 -------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 SS + +LGP P + + R+R+ I+++ P L ++ ++ T Sbjct: 766 GSAGVEFSSRELLSRPQILGPTPCVIERAKDRYRFHIVVKAPLNCDLSGALSAAVSRAGT 825 Query: 715 IPDSRKVKWVLDVD 728 P V +DVD Sbjct: 826 RP---GVSIAVDVD 836 >UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLK6_9FIRM Length = 798 Score = 693 bits (1789), Expect = 0.0, Method: Composition-based stats. Identities = 216/802 (26%), Positives = 370/802 (46%), Gaps = 83/802 (10%) Query: 3 VAHVALPVPL----PRTFDYLLPE--GMTVKAGCRVRVPFGK-QQERIGIVVSVSDASEL 55 +A V + L F Y +P+ + G RV VPFGK + +G+V+++ D ++ Sbjct: 2 LAEVVVKSFLLSRAENIFTYKIPKNIEEEISVGKRVIVPFGKGNKGTVGLVINILDEKDV 61 Query: 56 PLN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL---------- 104 + + K + V+D + + +L + ++ Y + L LP Sbjct: 62 ETDIKFKEINMVIDEREIVSKIQIKLAKFMSEKYITNLSYCLNCVLPPGDWSKIEEFFVL 121 Query: 105 ---------------------------------RQGRPAANAPMWYWFATEQGQAVDLNS 131 + N + + + L Sbjct: 122 NKEKSNELSVVEAEFFSKRKNILEIREFYNDNSKVNYLIENEIIVKKYKYNNSENKFLEK 181 Query: 132 L-------------KRSPKQQQALAALRQGKIWR-DQVATLEFNDAALQALRKKGLCDLA 177 K + KQ + L L+ + F A + +L L Sbjct: 182 FVKLNEDFDFSKIRKNAVKQLELLNFLKGKDFVSVKILRENNFTKAVVDSLISMEALVLT 241 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + ++L+LN EQ + I ++ + + +L+ G+TGSGKTE+YL + Sbjct: 242 ENKIYKNSIEEKSSY--KKLKLNKEQKDVLDNILNSEN--NKFLIHGITGSGKTEIYLQL 297 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 +EN+L QGK ++++VPEI LTPQTI RF RF + ++HS L E+L+ W + ++ + Sbjct: 298 VENMLEQGKSSIILVPEISLTPQTIERFSGRFGNDIAIIHSRLTIIEKLNQWKQIQDKDI 357 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+G RSA+F+P KNLG+++IDEEH+SSY + +Y+ ++A Y ++LGSA Sbjct: 358 KIVVGARSAIFSPIKNLGLVIIDEEHESSYISDQNPKYYTHEVAEYLVGLSGAKLVLGSA 417 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV---QAGLAPALITRMRQH 414 TP++ +LL L RA ++D++ + + ++ L+ +L +++ Sbjct: 418 TPSVNIYERTNSDDIKLLELKNRATKNSLPEVEIVDMREELLLGNKSILSNSLYEEIQKT 477 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH--LRCHHCDSQRPV 472 L QVILFLN+RG + + C CG++ +C CD T H+ CH C +P Sbjct: 478 LDRKEQVILFLNKRGRSSFVFCRSCGYVQKCDYCDISMTYHKDNRKDICICHMCGRTKPK 537 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P+ CP+C + G GTE LE+ + F +SRID DT+ KG E+ ++ Sbjct: 538 PKICPNCFKQSIKEFGFGTEALEEYIKNAFKDAKVSRIDADTSKEKGVYEEVYRKMKNKE 597 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 ILIGTQM++KG FP+VTLV ++ D +L FRSAE+ QL TQVAGR+GR K+G Sbjct: 598 IDILIGTQMISKGLDFPNVTLVGVVLADISLNIPSFRSAEKTFQLLTQVAGRSGRGDKEG 657 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 +V++QT+ P H + Y+ F ++ + RR PP V + + ++ Sbjct: 658 KVIIQTYKPSHYSIVNSSDHNYEEFFKEEINFRRSFLYPPKAHIVNFQFRSKSVENCMEE 717 Query: 653 LQQLRNLI---LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH-PSRVRLQHIINGT 708 L+++R+LI + + + +LGP P +R+ + ++ + + Sbjct: 718 LKKIRDLIFDKFKKEINLKNIIILGPNPDAIKWVNMVYRYNLTIKVLEDYDVFRQFLTEL 777 Query: 709 L----ALINTIPDSRKVKWVLD 726 + NT + + + +D Sbjct: 778 IFNKKYSFNTEKNGKLI-LTID 798 >UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae RepID=A5EW34_DICNV Length = 710 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 282/725 (38%), Positives = 402/725 (55%), Gaps = 20/725 (2%) Query: 7 ALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEV 66 + PL + F Y + +G RVRVPFG + + IGI V+ + + +K + +V Sbjct: 2 VVLRPLYQRFIYA--AATPIASGMRVRVPFGAR-DAIGITVATVAQPKTHFH-IKKIRKV 57 Query: 67 LDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQA 126 LD+EPVF ++ R L + A YY P G V ALP L G + TE+G+A Sbjct: 58 LDNEPVFDATLLRFLQYTARYYQVPEGTVFAAALPNALLNGASNKRTLPAIYRLTEKGRA 117 Query: 127 VDLNSLKRSPKQQQALAALRQGKIWRDQVA-TLEFNDAALQALRKKGLCDLASETPEFSD 185 + + KQQ L AL + Q+ T + A L L +G ++ Sbjct: 118 ANASG----KKQQAVLHALTIQPLSGAQLRQTFSVSAAWLNDLVNRGWLEMTE------T 167 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + A + + LN Q + + + TFS +L GVTGSGKTE+Y E +LA G Sbjct: 168 FIAPPAATEKAPTLNAAQNAVLQTLITKT-TFSVTVLDGVTGSGKTEIYWRWAELLLAAG 226 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 KQ V++PEIGL ARFR RF+A V HS ++++ RLS W K G+ +V+GTRS Sbjct: 227 KQICVLLPEIGLAMSIFARFRARFSAC-AVYHSEMSEAARLSVWQAVKAGDIKMVVGTRS 285 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF PF LG I++DE HD SYKQ + +RYHA D+AV RA IPI+LGSATP LE Sbjct: 286 ALFLPFCRLGAIIVDEAHDQSYKQSDQFRYHAADMAVVRAKQHNIPILLGSATPTLEHYQ 345 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 ++LL L RA + +++ K GL+ LI+ +RQHLQ Q++LFL Sbjct: 346 QTLTGTWQLLHLPERALTQHKPSIVIDEIEPSKQIGGLSQPLISAIRQHLQRKQQILLFL 405 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRG+AP + C +C W + C CD T+H L CHHC + +P +CP C ST L Sbjct: 406 NRRGYAPVMRCRECSWESSCTACDTMMTVHTFSRQLICHHCGRSQLLPVRCPKCASTQLY 465 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 GLGT++LEQT+ FP + RIDRD S +Q L ++H G ++IGTQ LAKG Sbjct: 466 VCGLGTQRLEQTVREQFPQARVLRIDRDVFSTAKQFQQALKQIHSGAIDVMIGTQWLAKG 525 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 HHFP + LVA++D D A +S+DFR+ ER AQL QV GRAGR + G + +QT H +HP+ Sbjct: 526 HHFPRLQLVAVVDADSAFYSSDFRAEERLAQLLVQVGGRAGR-EQAGTIWIQTQHAQHPI 584 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 + L + Y A A+Q L R+ QLPP+++ + A+ H L +R++ + + Sbjct: 585 F-SALSQPYFATAQQLLTIRQQAQLPPFSAQTLFWAQHHELSRTLAVLTSMRDVAQKAEI 643 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 W LGP+PAL ++ G++R Q+++Q P++ LQ + AL+ + VK + Sbjct: 644 GQTWQW-LGPIPALIARKDGKYRAQMVVQAPNKKVLQRELAQVRALLWEESRASGVKVGI 702 Query: 726 DVDPI 730 DVDP+ Sbjct: 703 DVDPL 707 >UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGZ0_BDEBA Length = 681 Score = 691 bits (1784), Expect = 0.0, Method: Composition-based stats. Identities = 251/749 (33%), Positives = 345/749 (46%), Gaps = 101/749 (13%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERI-GIVVSVSDASELPLNELKAV 63 VA PLP Y + ++ G V VP G+ ++ G+++ + E+P E+KAV Sbjct: 8 KVAADAPLPEALTYS--SDLPLQRGQLVTVPLGRGGRKVHGLILGPTQ--EVPDFEVKAV 63 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +++ + L W A YY HP+G V+ A Sbjct: 64 DSIVEEYAPLPEPYVKWLEWLAQYYLHPVGQVVQSA------------------------ 99 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 L+++ KQ+ + P Sbjct: 100 -----FPPLRKTEKQRA------------------------------------SKRPPVI 118 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + A L L EQ T +I + +FS LL GVTGSGKTEVYL +L+ VL+ Sbjct: 119 PQLEADSA-----LNLTDEQQTCFESI-AKFSSFSTHLLFGVTGSGKTEVYLRLLDKVLS 172 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 +GK+ +V+VPEI LTPQ I RF RF + LHS L D ER + W G +I+IG Sbjct: 173 EGKRGIVLVPEISLTPQLIQRFARRFGDKIAALHSQLTDRERTNQWWDIVEGRKSILIGA 232 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSALF P NLG+I++DEEH+ S+KQ E +Y+ RD AV P++LGSATP+LET Sbjct: 233 RSALFCPIDNLGLIIVDEEHEPSFKQDEKLKYNGRDAAVMLGKQMNCPVVLGSATPSLET 292 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---------------GLAPALI 408 N + KY L RLTRR N V+DL+ K L+P L Sbjct: 293 WKNAVEGKYHLHRLTRRVANRALPDIEVIDLRKLKSDDEEKQKAITKYSHLPFWLSPDLY 352 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 RM Q L +Q LFLNRRG A ++C CG ECP CD TLH A HL CH+CD Sbjct: 353 ERMHQVLDRGDQAALFLNRRGIAQMVVCPACGHTRECPNCDISLTLH-AHSHLICHYCDY 411 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 +CP C L +GLGTE LE L LFPG I+R DRD + LE +A + Sbjct: 412 HENFKTKCPDCKEGQLEAIGLGTELLETDLTRLFPGKKIARADRDEIQSRADLEDLIANM 471 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR- 587 G IL+GTQM+AKG FP + LV L+ D DFR+ ER QL TQ++GR+GR Sbjct: 472 ESGDIDILVGTQMIAKGLDFPKLKLVGLVLADVGFNLPDFRATERSFQLITQMSGRSGRH 531 Query: 588 ---AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 G V++QT + EH + ++ FA L R + PP V R + Sbjct: 532 VKDGESPGLVIIQTFNTEHDSITFAKNHDFEGFATHELEIRSALNYPPMGRLVSFRIQGT 591 Query: 645 NNQHAPLFLQQLRNLILSSPLADEK---LWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + L + + + VLGP A K G++R+ +L++ Sbjct: 592 KLGQVEETARLLARRAQALKTQFPQYGSIEVLGPAEAPLSKLRGQFRYHLLIKTTQPAAA 651 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPI 730 L + +P VK ++D+DP+ Sbjct: 652 NPFSRQLLGDQDWVP--SGVKILIDIDPM 678 >UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED105 RepID=A6GL59_9BURK Length = 680 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 276/728 (37%), Positives = 390/728 (53%), Gaps = 53/728 (7%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 V + PLP+ F Y T + G RV VP+G+Q RIG+V + ++ N +K V Sbjct: 3 VLVAAPLPKAFTYQWHSEHTPRFGMRVIVPWGRQH-RIGLVQGAAPDQQMAEN-IKPVHS 60 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 VLD + L+ +AA YYHHP+G + ALP LR P+ + E Q Sbjct: 61 VLDHGECLSAHWQALIEFAAKYYHHPLGMIALEALPKALRVLNARGEEPVMVAKSREHAQ 120 Query: 126 AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 K ++ LAA + GK DQ+ Sbjct: 121 -------KLLAERNDPLAASKGGKAKIDQL------------------------------ 143 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 E+ LN EQ AV + SAA F +LL GVTGSGKTEVYL +E L +G Sbjct: 144 ---------EKPVLNAEQLDAVAQLSSAAG-FQPFLLYGVTGSGKTEVYLHTVEERLKRG 193 Query: 246 KQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 +Q LV++PEI LTP A ++ER V V+HS L + R AW +A G A ++I TR Sbjct: 194 EQVLVLLPEINLTPAAQALYKERLAPHRVVVMHSNLAELTRTKAWFEAATGAADVIIATR 253 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL 364 + TP LG+IV+DEEHD SYKQQ+G RYHARDLA+ A ++PI+LGSATPALE+ Sbjct: 254 LGVLTPLPRLGMIVVDEEHDPSYKQQDGMRYHARDLALMLAKQREVPIVLGSATPALESW 313 Query: 365 CNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVIL 423 Y+ L L RA A +++ + GL+ + + Q+ +A Q I+ Sbjct: 314 LKADLGAYKRLSLKNRAVLGASLPKVELINTANFPAKEGLSEPAMQALVQNFEAGKQSIV 373 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 FLNRRG+AP ++C+ CGW+A C C + H+ + LRCHHC + + VP CP+CG+ Sbjct: 374 FLNRRGYAPQMVCNACGWVANCDHCTAHMVWHKNERMLRCHHCGAGQRVPTHCPTCGNQD 433 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 L G GT+++E+TLA L P I RID D+T KG +E L + H G A +L+GTQM+A Sbjct: 434 LTGFGRGTQRIEETLAGLLPTANILRIDADSTRNKGQMEALLQQAHSGEADVLVGTQMIA 493 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGH F +VTLV L+VD +L+S +R+ ER QVAGRAGR +V+QT +P+H Sbjct: 494 KGHDFANVTLVLALNVDASLYSHAYRAPERLFAQLMQVAGRAGRRAGDARMVVQTRYPQH 553 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 PL L Y++FA + R+ ++PP++ +RA+ + FL R L Sbjct: 554 PLFDALKAHDYESFASHEMQARKDARMPPFSHQATIRADHKKLANCLQFLSTARELGEPL 613 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 AD +++ PVP + GG R Q+L++ SR L + LA ++ +P S V+W Sbjct: 614 VDADNPVFMCDPVPLTVVRVGGIERAQMLIESESRPALHRFLTQWLAQLHELPGS--VRW 671 Query: 724 VLDVDPIE 731 L+VDP++ Sbjct: 672 FLEVDPVD 679 >UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae RepID=A1HMX8_9FIRM Length = 811 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 214/639 (33%), Positives = 324/639 (50%), Gaps = 16/639 (2%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG-KIWRDQVATLEF 160 + + A L+ L P QQ+ L L + ++ +++ Sbjct: 178 AMSISKFRPRYEQRLMLAVNRREAAETLDRLTGKPAQQRLLTVLMEESELTPNRLKQYRI 237 Query: 161 NDAALQALRKKGLCDLASETPEFSDWR---TNYAVSGERLRLNTEQATAVGAIHSAA--D 215 + ++ L GL + + A R+ L EQ AV I +A Sbjct: 238 SADTVKRLIAAGLVRSERRRVMRNSYAQLCREPAPQENRMALTNEQRQAVTQILAAIASR 297 Query: 216 TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 ++L+ GVTGSGKT+VY+ QG+Q +VMVPEI LT QT++RF ERF V V Sbjct: 298 EHKSFLIHGVTGSGKTQVYIEAAAAARQQGRQVIVMVPEIALTGQTVSRFNERFGEDVVV 357 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRY 335 +HS L+ ER AW + + GEA IVIG RSA+F P +G+I++DEEH+ +YKQ+E RY Sbjct: 358 VHSRLSAGERHDAWQRIRAGEAGIVIGARSAVFAPCTQIGLIILDEEHEFTYKQEESPRY 417 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 H R++A+ RA ++LGSATP+LE+ ++ LL L+ R V+D++ Sbjct: 418 HTREVALMRARQAGASVVLGSATPSLESYYQALAGRHVLLTLSERVDGRALPAVTVVDMR 477 Query: 396 GQKV---QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 + + ++ L + Q Q Q I+ LNRRG+A +LC +CG + C CD Sbjct: 478 EELAAGRRGVISQPLRELLTQTRQEGGQAIILLNRRGYATFVLCRECGHVLRCEHCDVSL 537 Query: 453 TLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDR 512 H +RCH+C R P CP+CGS ++ G GT+++E+ LA LFP + R+D+ Sbjct: 538 VYHATDKTIRCHYCQKTRQAPSLCPACGSRYIRYFGTGTQKVEEELAALFPEARVVRMDQ 597 Query: 513 DTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAE 572 DTT+ K A E+ L+ RG IL+GTQM+AKG P+VT V ++ D +L DFR+AE Sbjct: 598 DTTTGKMAHERILSAFSRGEYDILLGTQMVAKGIDIPNVTAVGIIAADTSLNLPDFRAAE 657 Query: 573 RFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 + L TQ AGRAGR + G VV+QT++PEH ++ Y AF A RR + PP Sbjct: 658 KTFALITQAAGRAGRGSQPGHVVVQTYNPEHYAIKAGAAHDYHAFYNIEAAYRRQLHYPP 717 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQIL 692 + + + Q L + + + + K V+GP PA K +R IL Sbjct: 718 FGGLIKLTVHGTEETLVCGHAQNLADELNRALSSIGKTQVVGPFPAPIAKIEDIFRMNIL 777 Query: 693 LQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++ + ++ + + R V +LD+DP+ Sbjct: 778 IKSNAMAEVKETLVSM-----GVASRRDV--ILDIDPLN 809 Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats. Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 16/226 (7%) Query: 2 PVAHVALPVPLPR---TFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A VA+ + + TF YL+P + V G RVRVPFG Q+E G VV+V + +E Sbjct: 3 RIAEVAVNIAVRTIAATFSYLIPPELAFVGRGWRVRVPFG-QREAEGFVVAVKEQAEAEG 61 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 LK V+ VLD EP F ++ + W ++YY P+ + L +P G+ + + Y Sbjct: 62 --LKPVLSVLDDEPWFDENMLQTAEWMSNYYLCPLAEALRLFVP-----GKGELKSHIAY 114 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + + S + S + Q L LR + +F L ALRK +L Sbjct: 115 RLNESESKPSSSLSCQISDEMNQVLNYLRAKSLTAQHQLVKKFGPNVLTALRKLERLNLV 174 Query: 178 SETP-EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 S +R Y +RL L + A + + L Sbjct: 175 ERAAMSISKFRPRYE---QRLMLAVNRREAAETLDRLTGKPAQQRL 217 >UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=Cyanobacteria RepID=Q3MDW5_ANAVT Length = 849 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 246/830 (29%), Positives = 372/830 (44%), Gaps = 110/830 (13%) Query: 2 PVAHVALPVP-LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDAS--ELPLN 58 V + P F Y +P + ++ G + VPFG QQ I + + +L + Sbjct: 28 QYVEVLVDFPGNSGLFTYRIPSQLEIRPGDILSVPFGSQQ-LGAIAIRLLAEPNIDLAQD 86 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG----------- 107 +++ V +V+ S F + W LL A YY+ P+ V+ ALP L Sbjct: 87 KIREVEDVVTSG-FFASAYWELLNRVASYYYTPLIQVIRVALPPGLLGRSQRRVRLIKRQ 145 Query: 108 ---------RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL 158 P A + + G ++ + + L + + + Sbjct: 146 NEQLSVAFLSPPAQQILQLLQSQPSGDYSFHYLQQKVKATYRGMRELLRIGLVESYLEPP 205 Query: 159 EFNDAALQAL-------------RKKGLCDLASE------------------TPEFSDWR 187 N LQ R++ + ++ + S + Sbjct: 206 RTNRPKLQKAVILIDTVDRDLTNRQREILEVLRRRGGELWHSELLQICSTSSSTLKSMEQ 265 Query: 188 TNYAVSGERLRLNTEQATAVG----AIHSAADTFSAWLLAGVTGS-----------GKTE 232 Y ER L TEQ + + + A + + + G GKTE Sbjct: 266 KGYIAIEEREVLRTEQGQVLDLDTPKLLNIAQENALVTIHRLNGFAQVLLHGVTGSGKTE 325 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLK 291 VYL + +LAQGK ALV+VPEIGLTPQ RFR RF + V HS L+D ER W + Sbjct: 326 VYLQAIAPILAQGKSALVLVPEIGLTPQLTDRFRARFGNNKISVYHSALSDGERYDTWRQ 385 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQI 350 G IVIGTRSA+F P NLG+I++DEEHDSS+KQ YHAR +A +RA E Sbjct: 386 MLTGTPQIVIGTRSAIFAPLPNLGLIILDEEHDSSFKQDSPIPTYHARTVAQWRAELENC 445 Query: 351 PIILGSATPALETLCNVQQK----------------------KYRLLRLTRRAGNARPAI 388 P++LGSATP+LE+ +V Q + L R + Sbjct: 446 PLVLGSATPSLESWVSVSQNSKFKIQNSKLTISSSPSSPPSPQSLYSPLPERINSRPLPP 505 Query: 389 QHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 ++D++ + + +L ++ Q Q ILF++RRG + + C CG++ EC Sbjct: 506 VEIVDMRQELQDGNRSIFSRSLQAALQHLEQTGRQGILFIHRRGHSTFVSCRSCGYVVEC 565 Query: 446 PRCDHYYTLHQAQ----HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 P CD HQ + LRCH+C+ P+ CP C S +L G GT+++ Q L+ Sbjct: 566 PHCDVSLAYHQTEVGAPQLLRCHYCNYVSVHPKHCPECSSPYLKFFGSGTQRVAQELSRQ 625 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 FPG+ R D DTT KGA L + G A +L+GTQML KG P VTLV ++ DG Sbjct: 626 FPGLKYIRFDSDTTRNKGAHRTLLTQFANGEANLLVGTQMLTKGLDLPQVTLVGVVAADG 685 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 L +D+R++ER Q TQVAGRAGR G V++QT+ PEHP+++ + + Y +F + Sbjct: 686 LLNLSDYRASERAFQTLTQVAGRAGRGDDPGRVIMQTYTPEHPVIEAVRHHDYQSFVQAE 745 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAP 681 L +R+ + PP+ +++R + + ++ ++P +LGP PA Sbjct: 746 LEQRQALNYPPYGRLILLRLSSFDPIQVQNTAGAIATVLNANP----GFELLGPAPASVM 801 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + R+RWQILL+ Q + + PD V +DVDP+ Sbjct: 802 RVANRYRWQILLKFAPEALPQ--LPDWDEVRLLCPD--GVSLTIDVDPLN 847 >UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Acidobacteria RepID=Q1IK26_ACIBL Length = 813 Score = 688 bits (1776), Expect = 0.0, Method: Composition-based stats. Identities = 225/609 (36%), Positives = 328/609 (53%), Gaps = 18/609 (2%) Query: 133 KRSPKQQQALAALRQ--GKIWRDQVATLEFN-----DAALQALRKKGLCDLASETPEFSD 185 K + Q+ L AL+ G++ D + LE N + L L K+ + ++ E F Sbjct: 205 KINANQEAILLALKAAGGRLRVDAMRDLEANGKPVPRSTLSTLVKRDIVEIVEEPAGFR- 263 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLA 243 ++ Q A+ I++ D+ F++ LL GVTGSGKT VYLS ++ VL Sbjct: 264 -ISSLKPRKLEFLFTPAQQDALRFINTGVDSGKFTSALLHGVTGSGKTAVYLSAMQEVLG 322 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 G+ A+++VPEIGLTP A E F V +LHSGL+D ER W + + GE IV+GT Sbjct: 323 AGRSAILLVPEIGLTPAVAADLHEVFGEQVAILHSGLSDDERAEQWHQIRRGEKRIVVGT 382 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+F P +L ++++DEEHD SYKQ+E RYHARD+AV RA ++LGSATP++ET Sbjct: 383 RSAVFAPVSDLALLIVDEEHDHSYKQEEVPRYHARDVAVVRAKMAGATVVLGSATPSMET 442 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADN 419 N ++ KY LL L R V+D++ + + G L+ L+ + + L+ Sbjct: 443 YFNAEKGKYALLSLPGRVQARPLPEVEVIDMRLEFQETGHESVLSRKLVEEVNERLERGE 502 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q ++ LNRRGFA +LC CG +C C T H+ L CH+C PVPR CP C Sbjct: 503 QAMILLNRRGFANFVLCRACGKTIQCRNCAIALTFHKRDRKLMCHYCGYLAPVPRTCPEC 562 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 S H+ G+G+E+LE+ L FP I R+DRDT + LE L +H G +L+GT Sbjct: 563 HSEHIQFFGMGSEKLEELLHGAFPKARIGRLDRDTVRGRDDLENILTALHHGEIDLLVGT 622 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM+AKGH VTLV ++ D AL DFR+AER QL TQVAGRAGR G+V++Q++ Sbjct: 623 QMIAKGHDIHGVTLVGVVGADAALGMPDFRAAERTFQLLTQVAGRAGRGNTPGKVLMQSY 682 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 HP+H ++ + F E+ R M PP+TS V +A + + Sbjct: 683 HPDHYVVDYAAKHDFQGFYEKESRLRSWMHYPPYTSLANVLVRSDRVNNALTWSGLIGKW 742 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + P E + V+GP A + +R+ +L+ SR +L ++ +A + R Sbjct: 743 FETVP--HEGVRVMGPAAAPIERLKNDYRYHFILKSRSREQLNSVLRALIAFSSAKKIPR 800 Query: 720 KVKWVLDVD 728 ++DVD Sbjct: 801 TA-VIVDVD 808 Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats. Identities = 64/229 (27%), Positives = 96/229 (41%), Gaps = 16/229 (6%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VALPVPL ++F Y EG G RV VPF +QQ+ GIVV+V D+ P E K Sbjct: 3 RFCDVALPVPLDQSFTYRF-EGAEPAVGVRVVVPF-RQQKLSGIVVAVHDSP--PSVEAK 58 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 ++ VLD+EPV + L W A YY PIG+V LP+ R Sbjct: 59 LILRVLDTEPVLNEQLLELGRWIAGYYIAPIGEVYRTMLPLNAEFRRAHGYRITERGQEA 118 Query: 122 EQGQAVDLNSLKRSPKQQQ-------ALAALRQGKIWRDQV--ATLEFNDAALQALRKKG 172 A +SL R+ K + L L G++ R+Q + + + + + K Sbjct: 119 LYASAEIGSSL-RAKKDTEHQMLEYAVLNHLADGEVVREQSLRSATQASREIFRTMLSKK 177 Query: 173 LCDLASETPEFSDWRTNYAVSGERL--RLNTEQATAVGAIHSAADTFSA 219 D + RT + + + ++N Q + A+ +A Sbjct: 178 WIDREDLSAVRDATRTVSVAALKEITGKINANQEAILLALKAAGGRLRV 226 >UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteria RepID=C6XMJ5_HIRBI Length = 740 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 240/742 (32%), Positives = 345/742 (46%), Gaps = 35/742 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +A V LP+PLP FDY L E M V+ G V VP G + G+V + LK Sbjct: 16 QIASVLLPMPLPEAFDYRLHEDMKVEVGAFVTVPLGARSV-TGVVWGLKQGP--SKRPLK 72 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 V EVL++ P+ + ++ Y P+G++L L ++ Sbjct: 73 YVEEVLEAAPLMPQVTRDFVERSSKYTCTPMGNMLAMCLRSRDALLPSPTETYVY----- 127 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQ----GKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + +P +Q+ L Q G + + + ++ L G Sbjct: 128 ----RTKSELPRITPARQKVLDIAPQSADQGMTAAELARQADVSTGVVKGLVDSGALAQH 183 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYL 235 + + N + G L EQ A+ A + F LL GVTGSGKTEVY Sbjct: 184 EAPIDKPFGKPNSELKG--FDLTDEQQAGADALCEAVRSKEFKPILLDGVTGSGKTEVYF 241 Query: 236 SVLENVL--AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 + L Q LV++PEI LT RF RF A HS ER W + Sbjct: 242 EAIAEALRTEPDAQILVLLPEIALTQAVRERFENRFGAAPAEWHSNATQKERRRVWREVG 301 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 G A IV+G RSALF PF+NL +I++DEEHD SYKQ EG Y RDL+V RAH ++ Sbjct: 302 AGRAQIVVGARSALFLPFQNLRLIIVDEEHDGSYKQDEGAVYQGRDLSVMRAHLGSATVV 361 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA--GLAPALITRM 411 L SATP+LETL N Q +Y+ ++L R G A + D+K L+P L+ + Sbjct: 362 LASATPSLETLANAYQGRYQHIKLLARPGAAVLPEILLADMKENPPAKDCWLSPLLVDAL 421 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 Q+L A Q +L+LNRRG+AP ++C CG + P + + T H+ L CH Sbjct: 422 EQNLDAGEQSLLYLNRRGYAPLVICKGCGERLKAPDTESWLTEHRYTGMLVCHLTGFSMK 481 Query: 472 VPRQCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P CP CG+ L+ VG G E+L + + LF G + DT L ++ + + Sbjct: 482 KPVNCPHCGAADSLMGVGPGVERLAEEVRGLFQGARVEVFSSDTARNPEELNGIISRMEQ 541 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALF---SADFRSAERFAQLYTQVAGRAGR 587 G ILIGTQ+ AKGH+FP++TLV +D D L +D R+ ER QL +QV+GRAGR Sbjct: 542 GEVDILIGTQIAAKGHNFPNLTLVGAVDADSGLKGGQGSDLRAGERTFQLLSQVSGRAGR 601 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 A K G ++QT+ P+ P +Q LL D F E + R + PP+ V N+ Sbjct: 602 ADKPGRAIIQTYAPDSPSIQALLANDRDWFMELEMKSREELGFPPFGRLAAVVISAENSL 661 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A ++ + + + GP PA GR R ++L++ V L ++ Sbjct: 662 AADDAAATFVRGAPNA----DGVDIWGPAPAPIAVLRGRHRRRMLIRANRNVDLSAYLSA 717 Query: 708 TLALINTIPDSRKVKWVLDVDP 729 I S V+ LD++P Sbjct: 718 WRERI---KLSSSVRVSLDIEP 736 >UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB87_DESAA Length = 824 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 219/639 (34%), Positives = 326/639 (51%), Gaps = 15/639 (2%) Query: 103 LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND 162 ++++GR + + EQ A R + + L L + + E Sbjct: 189 VMQKGRVRSKTETYIKALKEQSDAP-----ARQKSRHKILEILPKDGDMTMRALKKEVPS 243 Query: 163 AA--LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSA 219 A + + + G + + + R L +EQ A I A + + Sbjct: 244 APRWIWEMEEAGEIQVFEKEVYRDPFGEPIPPDETRFTLTSEQEVAYTEIVGALGRGYKS 303 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 LL GVTGSGKTEVYL +E L QG +V+VPEI L Q RF RF V VLHSG Sbjct: 304 ILLHGVTGSGKTEVYLRCVEKALEQGLSVIVLVPEIALISQMQRRFLARFGEKVAVLHSG 363 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 L D ERL W++ G+A I +G RS++F P KN G++++DEEHD SYKQ RY ARD Sbjct: 364 LTDGERLDQWMRIVRGQAPIALGARSSIFAPVKNPGLVIVDEEHDESYKQDSRLRYQARD 423 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ-- 397 LAV R H E+ +LGSATP++ + N K++ + + R ++DL+ Sbjct: 424 LAVMRCHMEKAVTVLGSATPSISSRHNCANGKFQKISIKNRVAERPFPEVTLVDLRNTTT 483 Query: 398 -KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 + ++ L L + + L + Q +LFLNRRGFA +C +CG C CD T HQ Sbjct: 484 GQNRSLLTDVLKHHLTETLAKNEQALLFLNRRGFANFPVCLECGGTITCAHCDVSLTYHQ 543 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 +CH+C + + + CPSCGS L +G+GTE++E +L +FP I R+DRDT + Sbjct: 544 EDGCFQCHYCGFCQDITKGCPSCGSRKLKMMGMGTEKVEDSLRSMFPQAIIGRLDRDTAA 603 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 +KG L L + I++GTQM+ KGH FP++TLV ++ D ++ DFR+ ER Q Sbjct: 604 KKGGLVSVLKGLREKTTDIVVGTQMITKGHDFPNITLVGVVCADLSMGFPDFRAGERTFQ 663 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L QVAGRAGR K G VVLQT++PEH + T YDAF + L R ++ PP+ Sbjct: 664 LLAQVAGRAGRGEKPGRVVLQTYNPEHFCITTACANDYDAFCNEELKFRHQLKYPPFARL 723 Query: 637 VIVRAEDHNNQHAPLFL----QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQIL 692 +R +++ F ++ R L+ + + VLGP+P+ + RWQ+L Sbjct: 724 AQIRFTGEDSKETGAFANSIGEECRKLLWAEKAFKNSVQVLGPIPSPIARIARMHRWQML 783 Query: 693 LQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L+ + + +I + ++ V+DVDP+ Sbjct: 784 LKGLDHKAFRAYLRQVNRIIQSKAGAKGPTAVIDVDPVN 822 Score = 121 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 18/210 (8%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 VA+ PL +T Y LP+ + G RV VP G+++ G ++ + E + Sbjct: 16 AYLEVAVAAPLEQTLTYKLPQDQAPLAEPGKRVLVPMGRRRV-TGYILGPAPKPE--GFK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 ++++++LD P+F ++ L W ADYY +P+G + +LP + + Sbjct: 73 ARSILDILDELPLFPEAMVPLFRWLADYYIYPLGLTIKESLPSGVNH------LELAMVK 126 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV---ATLEFNDAALQALRKKGLCDL 176 T +G+ +Q+ L G ++Q+ A + + + +++KG ++ Sbjct: 127 ITPEGEKALEAGQANLKEQRFLEILLTAGATAQNQLLKKAGKGASVSTILTMQRKGFVEI 186 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATA 206 + ++ EQ+ A Sbjct: 187 HRVMQKGRVRSKTETY----IKALKEQSDA 212 >UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW75_ALIAD Length = 805 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 252/800 (31%), Positives = 375/800 (46%), Gaps = 79/800 (9%) Query: 2 PVAHVALP---VPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 VA V + + L + FDY++P GM V G RV VP + R GIV +V + + + Sbjct: 7 RVAEVVVDGTALFLDKRFDYIVPPGMDVSPGVRVVVPM-RDSVRSGIVWAVREVANV--G 63 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR---------- 108 L+ + V+D PV T R+ W D Y + + + LP R Sbjct: 64 GLRPLARVIDRVPVLTPHQMRMAEWLCDRYAATLPEAVSAILPGAFRVRVRKVIVPSADA 123 Query: 109 --PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE------- 159 P + + + RS ++A A + R+++ E Sbjct: 124 PVPDDVKASTLFRFIAESEPEWSEIRARSKADERAARAWAEAGFVREELRVDEAVGEKRR 183 Query: 160 ---------------------------------------------FNDAALQALRKKGLC 174 + +++ L + GL Sbjct: 184 AYLVTRASEVDLRREAERRSRRARRQSELLLHLAEAGEMPWDRRAYPLSSVAPLIEAGLV 243 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAI-HSAADTFSAWLLAGVTGSGKTEV 233 +A + + + L Q AV A+ A LL GVTGSGKTEV Sbjct: 244 AVAERRVKRAP--ASLDAEEPWPELTPYQVAAVRALAEMARQGHGVALLHGVTGSGKTEV 301 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ ++ + QALV+VPEI LTPQ + RF RF V VLHSGL+ ER W + Sbjct: 302 YMHLIRGAIEDEGQALVLVPEIALTPQLVQRFERRFGGRVAVLHSGLSLGERREEWTRVL 361 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GEA++VIG RSA+F P + L ++VIDEEH+ SYKQ++ Y AR++A++RA ++ Sbjct: 362 EGEASVVIGARSAVFAPMRKLRLVVIDEEHEPSYKQEDAPHYDAREVAMWRAREAGALVV 421 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP+L ++ V++ RL+ L RA V+D++ + + L Sbjct: 422 LGSATPSLASMFRVERGDARLVSLPVRANRRPLPPVDVIDMREELRAGNRSIFSRRLAAE 481 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ--AQHHLRCHHCDS 468 + + + Q ILFLNRRG+A A LC CG ECPRCD + T+H+ H L CH+C Sbjct: 482 LERTVSEGMQAILFLNRRGYAHAALCRACGHSMECPRCDIHLTVHRRADGHVLVCHYCGH 541 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + P+ R+CP+C LVP GLGTEQ+EQ L +P + + R+D DTT RKGALE + Sbjct: 542 EEPLVRRCPACAEDALVPYGLGTEQVEQHLLRTWPAMRVLRMDLDTTRRKGALESIIDRF 601 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 RG A +L+GTQM+AKG FP V LV ++ D L D+R+ ER QL TQVAGRAGRA Sbjct: 602 QRGEADVLVGTQMIAKGLDFPRVRLVGVVAADAMLTLPDYRANERAFQLLTQVAGRAGRA 661 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 G ++QT+ P H ++ Y F E+ R + PP+ + A + Sbjct: 662 ETDGITLIQTYQPGHRAIEAAKSHDYRQFYERERESREFFRYPPFCELAVFLASHSEERL 721 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 A + + SP A L VL P+ + +R+Q+++++ + ++ + Sbjct: 722 ARGAAARFERELARSPSA-ASLTVLPAGPSGIRRIDNVYRYQVVMKYAAWQDVKEDVVRA 780 Query: 709 LALINTIPDSRKVKWVLDVD 728 L+ + VLDV+ Sbjct: 781 YRLVKEKMNRLGGSAVLDVN 800 >UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae RepID=UPI0001C17122 Length = 884 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 222/616 (36%), Positives = 323/616 (52%), Gaps = 25/616 (4%) Query: 131 SLKRSPKQQQALAALRQ--GKIWRDQ-VATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 L + +Q++ L L G++W V + L+ L K G C + E + Sbjct: 277 ELSLTKRQREILNLLADHGGELWLTACVEICKTTPPTLRLLEKLG-CVVIEEQERLRREQ 335 Query: 188 TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 + L +Q+ A+ AI +A F+ LL GVTGSGKTEVYL + +L +GK Sbjct: 336 GPKMGKDQAKTLTPDQSQALEAIIAAKG-FNKILLHGVTGSGKTEVYLQAIAPLLGEGKS 394 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 ALV+VPEIGLTPQ RFR RF V+V HS L+ ER W + G + +VIGTRSA+ Sbjct: 395 ALVLVPEIGLTPQLTDRFRARFGNKVQVYHSNLSRGERYDTWRQMFTGSSQVVIGTRSAV 454 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 F+P NLG+I++DEEHDSS+KQ YHAR +A +RA E P+ILGSATP+LET + Sbjct: 455 FSPLPNLGIIILDEEHDSSFKQDSRIPTYHARTVAQWRAELENCPLILGSATPSLETWVD 514 Query: 367 V----QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADN 419 V + L L +R + ++D++ + Q + L +++ Sbjct: 515 VTLPPSPTHNQYLSLPQRINSKPLPPIEIVDMRQELKQGNRSMFSRTLEQALQELKGKGQ 574 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ----AQHHLRCHHCDSQRPVPRQ 475 Q ILF++RRG + + C CG++ ECP CD H L+CH+C+ R P+ Sbjct: 575 QGILFIHRRGHSTFVSCRSCGYVLECPNCDVSLAYHHLEAGGPELLKCHYCNYGRSHPKL 634 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP CGS +L G GT+++ Q + FP + + R D DTT KG+ + L + +G A + Sbjct: 635 CPECGSPYLKFFGSGTQKIVQEINRQFPDLQVIRFDSDTTRNKGSHRKLLDQFAKGEADL 694 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQML KG P VTLV ++ DG L +D+R++ER Q TQVAGRAGR + G V+ Sbjct: 695 LVGTQMLTKGLDLPQVTLVGVVAADGLLHLSDYRASERAFQTLTQVAGRAGRGEESGRVI 754 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT+ PEH ++ + Y +F LA+R + PP +++R + Q Sbjct: 755 IQTYTPEHAVIAAVQNHDYQSFCRAELAQRDALSYPPCGRLILLRLTSLDPIQVQNTAQI 814 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + P L +LGP PA + R+RWQILL+ + Q + + Sbjct: 815 IATTFPHQP----GLEILGPAPASILRVANRYRWQILLKFAPNILPQ--MPDWGQIFQLC 868 Query: 716 PDSRKVKWVLDVDPIE 731 P V +DVDP+ Sbjct: 869 PP--GVSLTIDVDPLN 882 Score = 68.7 bits (167), Expect = 8e-10, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 17/200 (8%) Query: 18 YLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEVLDSEPVFTH 75 Y +PE + + G + VP+G QQ I + + S +PL +++ V +++ E F Sbjct: 98 YQIPETLNINPGDILTVPWGTQQ-LGAIAIRLLSQLPSGIPLEKVREVKDIVSKE-FFPR 155 Query: 76 SVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRS 135 + W LL A YY+ P+ V+ ALP + + + + + S Sbjct: 156 TYWELLGRIATYYYTPLIKVIRVALPPGILERSQSRLRLKRENIPPGGEEFLG------S 209 Query: 136 PKQQQALAALRQGKIWRDQVATLEFN----DAALQALRKKGLCD---LASETPEFSDWRT 188 ++ L L+ L+ D + L + + +++ + Sbjct: 210 QAAREILKVLQSQPDGDYSFQYLKRQVRGFDRGKKQLLDRNWVESYFKLTQSKPQTQLAV 269 Query: 189 NYAVSGERLRLNTEQATAVG 208 G L L Q + Sbjct: 270 TLVDHGRELSLTKRQREILN 289 >UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1L0_ACIC5 Length = 825 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 255/831 (30%), Positives = 379/831 (45%), Gaps = 110/831 (13%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 MP VALPVPL R F Y + G RV VPF + ++ GIV+ + D + P E Sbjct: 1 MPAFCDVALPVPLDRAFTYS-TGLFAPEVGARVLVPF-RNEKLSGIVLRLHD--DPPPVE 56 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP-ILLRQGRPAANAPMWYW 118 K ++ V+D + + + + L W A YY PIG+VL LP I + Sbjct: 57 AKPLLAVMDEQSILSPQLLDLARWIAQYYVAPIGEVLRAMLPLIAEVRRHVLYRITDTGR 116 Query: 119 FATEQGQAVDLNSLKRSPKQQQ-----ALAALRQGKIWRDQVATLEFNDAA--LQALRKK 171 A G + R P +Q L L G R + + L+ + +K Sbjct: 117 EALFAGAQQGSSRRSRLPAAEQDREYAVLNYLESGDPARVSAIRSKTGASIDLLRGMLRK 176 Query: 172 GLCDLAS--------ETPEFSDWRTNYAVSGERLRLNTEQATAVGA-------------- 209 + T + + RLN Q T + A Sbjct: 177 KWLARETAAETRTAQRTMRVARLAQSLDGEARLPRLNENQQTILAALAGIDGGVPVAQLR 236 Query: 210 ----------------IHSAADTFSAWLLAG---------------------VTGS---G 229 + + + +L++G +TGS G Sbjct: 237 ELDVPDSTLGTLVRRGLVAIEERPVDFLMSGLSIRHHGEHKLIEAQQQALAQITGSVEEG 296 Query: 230 KTEVYLSVLENVLAQGKQALVM----------------VPEIGLTPQTIARFRERFNAPV 273 YL L V GK A+ + VPEIGLTPQ A+ F + V Sbjct: 297 GFRPYL--LHGVTGSGKTAVYLAAMRHALERGKSSILLVPEIGLTPQMAAQLHRAFGSEV 354 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 +LHS L ER W + + EA +V+GTRSA+F P ++LG+I++DEEHD SYKQ+ Sbjct: 355 ALLHSALLPEERAEQWHRIRRREARVVVGTRSAIFAPVEDLGLILVDEEHDGSYKQESVP 414 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 RYHARD+AV RA ++LGSATP+LE+ N + KY + + R ++D Sbjct: 415 RYHARDVAVMRAKLAGATVVLGSATPSLESWNNAIEGKYTRIEMHERIHQRPMPEVELVD 474 Query: 394 LKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 ++ + + G + LI + + L Q I+ LNRRG++ +LC CG +C C Sbjct: 475 MRREFQETGAEHLFSRTLIDQTQATLDRGEQAIVLLNRRGYSFVVLCRACGEKLQCENCS 534 Query: 450 HYYTLHQA----------QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLA 499 T H+A L CH+C +R +P++CP C S HL +G G++Q E+ L Sbjct: 535 ISLTYHKAVTDAEAHAPVGQRLECHYCGYKRTIPQRCPKCDSEHLYFLGAGSQQGEERLQ 594 Query: 500 PLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDV 559 +FPG I R+DRDT +G LE+ LA++H G +L+GTQM+AKGH VTLV ++ Sbjct: 595 EIFPGARIGRMDRDTVRGRGDLERLLAKLHSGEINLLVGTQMIAKGHDIHGVTLVGVVGA 654 Query: 560 DGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAE 619 D AL DFR+AER QL TQVAGRAGR G+V++QT++PEH ++ + +FAE Sbjct: 655 DHALGLPDFRAAERTFQLLTQVAGRAGRGELPGKVIVQTYYPEHYAVECARQHDFHSFAE 714 Query: 620 QALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPAL 679 + L RR M+ PP+ + V + + + L + ++ D + VLGP A Sbjct: 715 RELKYRRWMRYPPYAAITNVLLQSEDFGQLAHWAAALGRWLSAAEFPD--VRVLGPATAP 772 Query: 680 APKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + R +LL+ SR LQ ++ + + ++DVD + Sbjct: 773 IARIKRMHRMHLLLKSQSRQSLQRVLRLLRHHAEEVGIPPR-NLIIDVDAV 822 >UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI5_9FIRM Length = 694 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 228/705 (32%), Positives = 340/705 (48%), Gaps = 39/705 (5%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQ---------ERIGIVVSVSDASELPLNELKA 62 L F Y + ++ G R VPFGK + E G + S+S P +K Sbjct: 15 LDHLFTYG--SSVPIERGIRCYVPFGKSRRMAFVDHSEEYDGTLESLSQKLGYP---VKE 69 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + ++LD EP+ ++ L LW + + R + E Sbjct: 70 IQQILDEEPLLNQELYDLALWLKEKTLSTTIACFQVMMTNKKRVKGKVKSV------VLE 123 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 Q V S S KQ Q L +++ ++ + ++ L KG+ + Sbjct: 124 QIIEVADESFSLSVKQAQCLRYVQEHTPISYTELRKKY-PSIVKTLLNKGVF-IKKAQER 181 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 S + V ++ LN EQ A I LL G TGSGKTEVYL + + + Sbjct: 182 LSFLQAEQEVQPLKV-LNQEQTKAYQLIQRKEG---VHLLYGQTGSGKTEVYLHLAKKAI 237 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 +GKQ L++VPEIGLTPQ + R F + + HSGLN+ ER + K G +++G Sbjct: 238 EEGKQVLILVPEIGLTPQMVNRVSRVFGQDLGMYHSGLNEQERYEQYQLVKQGRLKVIVG 297 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+F PF+ LG+IV+DEEHDSSYKQ YH RD+AV RA P++LGSATP+LE Sbjct: 298 TRSAIFLPFQKLGLIVLDEEHDSSYKQDVQPSYHCRDVAVERAGFHHCPLVLGSATPSLE 357 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---GLAPALITRMRQHLQADN 419 + + Y+++ L R G A HV+D+ + Q L+ L R+ + L+ Sbjct: 358 SYAKALKGVYQMVSLKTRFGQD-MAKVHVVDMSQEIRQGKDYILSDELKQRLTEVLRKKE 416 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q IL LN+RG++ L C C + CP CD + H ++CH C + V R+CP C Sbjct: 417 QAILLLNKRGYSRLLRCKSCQEVLTCPHCDLALSYHADCQKMKCHSCGYEMKVLRRCPHC 476 Query: 480 GSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 GS H G GT++L + + FP I R+D D T RK A + L A IL+G Sbjct: 477 GSEHGFSGYGFGTQRLCEEVQKEFPKSRILRMDFDNTQRKNAHRKILESFGNHKADILVG 536 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG FP+VTLV +L+ D L +D+RS E L Q AGR+GR K+G V+ Q Sbjct: 537 TQMVAKGLDFPNVTLVGVLNADDGLQRSDYRSGEHTFDLLMQAAGRSGRGEKKGTVIFQV 596 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 ++P H ++ + + Y++F +Q + R + + PP+TS V E + + + Sbjct: 597 YNPTHFAIRFAIEQDYESFFKQEMVYRHLAKYPPYTSFVSFTFEGRKEEKVREIAENFQQ 656 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 I + LG A K+ +R++I+++ L Sbjct: 657 EIAKICFS------LGV--AALLKKQDLYRYRIVVKEKYLENLLK 693 >UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepID=Q3ASD1_CHLCH Length = 815 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 232/631 (36%), Positives = 327/631 (51%), Gaps = 4/631 (0%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN 161 L ++ + T Q L S+ + KQ L+ L + LE + Sbjct: 182 TLSKKFSTKKPKYKSAYRLTAPLQDGVLESVASAKKQHATLSTLADLYPETAFLNELEVS 241 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSA 219 A +Q L KGL + + E + + + +Q + + SA+ + Sbjct: 242 HAVIQVLLNKGLVEKVQKRIESNFSSGYRESAQPAKKPTAQQQKVLNELCSASRQGHYQT 301 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 +LL GVTGSGKT VY+ L+ VLA GK A+V+VPEI LTPQT RFRE F+ + +LHS Sbjct: 302 FLLHGVTGSGKTLVYIEFLKEVLAAGKTAIVLVPEIALTPQTAGRFREHFHHDIAILHSA 361 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 ++ E+ AW K+G I +G RS LF P +NLG I++DEEHD +YKQ RYHARD Sbjct: 362 MSLQEKYDAWHSLKSGRCRIALGARSTLFAPLENLGAIIVDEEHDGAYKQDRSPRYHARD 421 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV 399 AV RA +LGSATP+ E+ N Q KY LLR+ R A ++ ++ Sbjct: 422 TAVMRAMLSNAICLLGSATPSFESYQNAQNGKYHLLRMAERIDGATMPTISLIWMRESPR 481 Query: 400 QA-GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + ++ L ++ Q ++ + QVIL NRRGFA ++LC +CG I CP C+ H Sbjct: 482 RTTSISEMLYQQIAQRIEKNEQVILLQNRRGFAGSILCLECGHIPLCPHCNIPLVYHATH 541 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 +HLRCH+C C +C ST L G GTE++E+ L LFP I R+D DTT++K Sbjct: 542 NHLRCHYCGHTERYKAMCSACKSTGLFYKGSGTERIEEELQKLFPDEKILRMDVDTTAKK 601 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 GA + L E H ARIL+GTQM+AKG FP VTLV +L D L DFR++ER L Sbjct: 602 GAHGRILREFHERKARILLGTQMVAKGLDFPAVTLVGVLMGDIGLNIPDFRASERTFALL 661 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QVAGRAGRA GEV++Q ++ E + LL+ Y+ F +Q L RR + PP + Sbjct: 662 MQVAGRAGRAAIPGEVLIQVYNKESDVFTALLHGDYERFFQQELESRRTLLYPPAARLIK 721 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 + A + I+ L +++ VLGP PA K R+R+ +L++ Sbjct: 722 FECSADDEVQAEAAATFCKE-IVQQHLPEKQGMVLGPAPACIAKIRNRFRYHVLVKLMLG 780 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 I I++ S V +DVDP Sbjct: 781 KLSPLFIREMSDTIHSRFRSANVLLTVDVDP 811 Score = 65.6 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 81/215 (37%), Gaps = 18/215 (8%) Query: 15 TFDYLLPEGM--TVKAGCRVRV-PF-GKQQERIGIVVSVSDASELP-LNELKAVVEVLD- 68 F ++PE ++AGC V + G+ IG V+S+S + +NE E++D Sbjct: 15 PFSLVVPEAFCEELQAGCMVLLLSLKGQGLMSIGYVLSLSPDAPPDMVNEELPSFEMVDL 74 Query: 69 ---SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 S+PV + +L W ADYY D + ALP+ +R + + Sbjct: 75 LNGSQPVLNGELLKLTSWIADYYLTRPIDAIHTALPVAIR-TTVHDVVEAAGFTLQAEPT 133 Query: 126 AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 V +L+RS + A + ++ + + L K G L+ + Sbjct: 134 KVMNTALRRSILKLLATNKQLTVTQLQRRLGKKQL-YKTISQLEKGGYLTLSKK------ 186 Query: 186 WRTNYAVSGERLRLNTE-QATAVGAIHSAADTFSA 219 + T RL Q + ++ SA + Sbjct: 187 FSTKKPKYKSAYRLTAPLQDGVLESVASAKKQHAT 221 >UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachyspira RepID=C0QW49_BRAHW Length = 661 Score = 685 bits (1769), Expect = 0.0, Method: Composition-based stats. Identities = 203/549 (36%), Positives = 297/549 (54%), Gaps = 10/549 (1%) Query: 190 YAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 A L+LN EQ + I+ + D+ +LL GVTGSGKTEVYL ++ V+ GKQ Sbjct: 114 PAKQKPYLKLNEEQEAVLKKINESIDSNNPKTFLLHGVTGSGKTEVYLQAIKKVVDMGKQ 173 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 A+V++PEI LTPQTI RF ERF + VLHS L+ + + W K E IVIG RSA+ Sbjct: 174 AIVILPEISLTPQTIKRFAERFEGKIAVLHSKLSPNSKYRYWQMIKKDEIKIVIGARSAI 233 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 F+P NLG+IVIDEEH++SYK + RYHAR +A YR E ++LGSATP++E+ Sbjct: 234 FSPTPNLGIIVIDEEHETSYKAGDTPRYHARQVAFYRKSQENATLLLGSATPSIESFYYA 293 Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA---PALITRMRQHLQADNQVILF 424 K LL L +RA + +LDLK +K L+ + + L+ Q+ILF Sbjct: 294 SIGKIELLSLKKRAASVNMPEVKILDLKKEKRADAFPMITQKLVEEINKKLEKKEQIILF 353 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNR+G+AP + C C + ECP C T H+ ++ + CH+C + + C C H Sbjct: 354 LNRKGYAPVVSCSYCQRVLECPNCSVSLTYHKKKNVVMCHYCGYTQYLDELCDECKIGHF 413 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 +G GTE++E+ L LFP + R+D+DT E+ G IL+GTQM+AK Sbjct: 414 ERIGSGTEKVEEHLNILFPNAVVERMDQDTVGGTKNYEKIFKRFSDGEIDILVGTQMIAK 473 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G FP+VTLV +L D +L DFRSAER L TQVAGR+GR K+G V +QT+ P + Sbjct: 474 GLDFPNVTLVGVLFADMSLHIPDFRSAERTFNLITQVAGRSGRGDKKGIVYIQTYSPNNY 533 Query: 605 LLQTLLYKGYDAFAEQALAERRM-MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 ++ Y +F + + R+ + PP++ V + + + ++ +++ Sbjct: 534 SIECAKNHDYISFYNKEIENRKAPLNYPPFSRLVRLVIRGIDEKKVENDANKIADMLRME 593 Query: 664 PLAD-EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 D +K+ +LG K +RW IL++ PS L++ N + Sbjct: 594 TYNDSDKIIILGATACAMSKLNKYYRWNILIKTPSHSLLKNFFNKLNTNFAADKGN---Y 650 Query: 723 WVLDVDPIE 731 +D+DPI Sbjct: 651 IEIDIDPIN 659 Score = 99.2 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 12/146 (8%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK-AGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V +P+ R Y P+ + GCRV P K + GIVV + + ++ Sbjct: 2 YVKVVFNLPIDRILTYRKPDEINDSLVGCRVVAPI-KGKNNKGIVVEEVETIDGN-YKVY 59 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + +D EP+ + ++L W ++YYH G+ LF ALP+ + P+ Sbjct: 60 PIKARIDLEPICSDKEFKLAKWMSNYYHSSFGEALFAALPVGTPAKKEKKAKPI------ 113 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQ 147 A LK + +Q+ L + + Sbjct: 114 ---PAKQKPYLKLNEEQEAVLKKINE 136 >UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK8_9FIRM Length = 791 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 237/797 (29%), Positives = 373/797 (46%), Gaps = 79/797 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDAS-ELPL 57 +A + + P L +TF Y +P+ ++ V +G R VPF +QE GI++S + Sbjct: 5 IAEILINRPSKHLNKTFSYKIPDHLSYVGSGWRCIVPFAGKQEE-GIILSCHEEEFSHIS 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +L + + +DS P FT ++ + W + YY + D L L + ++G Sbjct: 64 YKLLEIYDAIDSVPWFTDAMIKTAKWISQYYMCTLIDALRLFL--IDKKGIRTEVLYEIN 121 Query: 118 WFATEQGQAVD---LNSLKRSPKQQQAL--------AALRQGKIWRDQVATLEFNDA--- 163 W + + + S++ K+ L L +G I ++ + + Sbjct: 122 WKEIPECEDIWGLIDISVEIISKEDAVLVLGKTRCNRYLAKGFIKETELLQKVYKEPLEE 181 Query: 164 --------------------------------ALQALRKKGLCDLASETPEFSD------ 185 ++ +L G + Sbjct: 182 WLAINNKSESESMKRGGRQKALWSHLCQIGQDSISSLISAGFSRDVIRRFCRNGNGHLFY 241 Query: 186 ------WRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSV 237 S +L EQ AV I A + + LL GVTGSGKTEVYL Sbjct: 242 RGKKTFSLVENKKSDNPRKLTAEQKYAVEYIIGAVNEERYKGILLYGVTGSGKTEVYLRA 301 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 E+ +A G L+ VPEI LT Q ++ F + F V +HS L+ ER + + N E+ Sbjct: 302 AESAIAAGGTVLLEVPEIALTNQMVSYFADYFGDKVVFMHSNLSKGERYNNRQRIANEES 361 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +I+IG+RSALF PFKNL +I++DEE+DSSYKQ E RY+ RD+A A PI+LG+A Sbjct: 362 SIIIGSRSALFMPFKNLKLIIVDEEYDSSYKQTETPRYNGRDVAKVMAVIYNCPIVLGAA 421 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---GLAPALITRMRQH 414 TP++ T + KK LL + +R +V D++ + L+ +I +R Sbjct: 422 TPSVTTFFAAKNKKIELLEMRQRVHRTPLPQIYVYDMRSEADIGHATNLSRPMIDLLRDT 481 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 +Q +++ IL LNRRGFAP L+C CG++ +C CD H+ +H L CH+C+S P+PR Sbjct: 482 VQKNHKAILLLNRRGFAPTLMCKHCGYVFKCTHCDVPLVYHKDKHRLNCHYCESIFPLPR 541 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QCP C S ++ +G GT+++E+ L L P R D D+T+RK + + L+ G Sbjct: 542 QCPVCSSQDILYLGWGTQRIEEDLKKLLPEAKCCRFDVDSTARKYSAAKILSNFRDGKFD 601 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL GTQM+AKGH P V V +L VD L + +AE+ L TQ AGRAGR +QG V Sbjct: 602 ILFGTQMVAKGHDIPGVQSVGILSVDSTLNMPTYLAAEQTFNLITQCAGRAGRNLEQGRV 661 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQT++ EH ++ T + YDAF +Q L RR + PP+T + + + A + Sbjct: 662 ILQTYNTEHYVILTAAKQDYDAFYQQELEYRRTLHYPPFTRLMKITCFNKKESIARNHAE 721 Query: 655 QLRNLILSSPLADEK-LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 ++ I + V P K + +L++ + + + Sbjct: 722 KIYRYIREMLPGIPDYISVTPPYDEPVKKVRNIYNVSLLIKGKT-------LRRLKLSMQ 774 Query: 714 TIPDSRKVKWVLDVDPI 730 ++ ++DVDP+ Sbjct: 775 NSKIFQENDIIIDVDPL 791 >UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=Bacteria RepID=Q6AL40_DESPS Length = 866 Score = 682 bits (1761), Expect = 0.0, Method: Composition-based stats. Identities = 212/585 (36%), Positives = 309/585 (52%), Gaps = 8/585 (1%) Query: 152 RDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIH 211 RD + AL L ++GL + + + L+ EQ A I Sbjct: 279 RDLLRLYPGAAKALVYLEERGLVERFQRRVFRNPFGDTLPFFPRIEELSPEQEEACSEIK 338 Query: 212 SAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF 269 + F+ +LL G+TGSGKTEVYL E +A+G+ LV+VPEI L Q A F RF Sbjct: 339 KTIEGEIFAPFLLYGITGSGKTEVYLRSAEEAIARGRDVLVLVPEIALATQLEAYFVSRF 398 Query: 270 NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ 329 V + HSGL SE+ W A +G A IVIG RSA+F P KN+G+I++DEEHD +KQ Sbjct: 399 GDLVVLQHSGLKASEKYDQWSLALSGRAKIVIGARSAIFAPLKNVGLILVDEEHDGGFKQ 458 Query: 330 QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ 389 + +RY+ARDLAV RA ++LGSATP++ + + + KYRLL + R G+ Sbjct: 459 DDSFRYNARDLAVLRAKYHSATVVLGSATPSVTSFYHAKSGKYRLLTMKNRIGSRTLPRV 518 Query: 390 HVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 V+DL KG+K + P L T +++ L Q IL +NRRGF+ +LC DCG I C Sbjct: 519 RVIDLNTRDKGKKKKGIFQPPLQTALKEVLAQGKQSILLMNRRGFSAIVLCRDCGEIVSC 578 Query: 446 PRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGV 505 RC+ TLH+ L CH+C P C SCG ++VPVG GTE++E+ + L P Sbjct: 579 KRCNVSLTLHRHSKKLVCHYCGFSLPEATVCRSCGGANIVPVGFGTERVEEEVQKLLPEA 638 Query: 506 PISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFS 565 ++R+D DT + + L ++ G +LIGTQM+AKGHHFP V LV ++ DG + Sbjct: 639 RVARLDSDTAGNREHFLKILQKMRDGQIDVLIGTQMIAKGHHFPGVVLVGVVWADGGMSL 698 Query: 566 ADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAER 625 DFR+AE+ QL +QV GRAGR G+V +QT P+H + Y AF E ++ R Sbjct: 699 PDFRAAEKTYQLISQVTGRAGRGDSPGKVFIQTMRPDHYAIAFARNHDYQAFYEHEISLR 758 Query: 626 RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRG 684 + PP+ + N + N + ++ +LGP PA + Sbjct: 759 QNPLFPPFVRLIAFHIRGENEGQVKNSAGNIANFCRRENRDKKLQVDILGPAPAPIDRIK 818 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +RWQ+L++ +L + + + + + K+ ++DVDP Sbjct: 819 DSYRWQVLIKGSCYEKLHTLCHRVESAGKELLLA-KITMIIDVDP 862 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 102/260 (39%), Gaps = 26/260 (10%) Query: 2 PVAHVALPVPLPRTFDYL---LPEGMTVKA---GCRVRVPFGKQQERIGIV------VSV 49 P VAL +P+ + Y + G A G RV VP +Q I+ V+ Sbjct: 15 PEVEVALALPVNQILTYSLRGVDTGGRSDAHMLGMRVLVPLSGRQATAYIINILREKVAC 74 Query: 50 SDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP 109 + E ++++++ LD +F ++ W +DYYH+P+G V+ ALP L Q Sbjct: 75 PEGREEKKYKIRSILRFLDKGALFHSNMLPFFKWISDYYHYPLGLVIKSALPGGLTQKTV 134 Query: 110 AANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ-VATLEFNDAALQAL 168 + + + ++ P Q + L + + + N L L Sbjct: 135 SVIKRGEAPW----DEKKLAGLIQEMPDWLQRVCQLGKLSFAESRSLLKESKNRTLLTKL 190 Query: 169 RKKGLCDLASETPEFSDWRTN---YAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGV 225 + GL + E S N Y + G L +++ QA + S + F LL+ + Sbjct: 191 EELGLVQIGQEQVGDSVREKNEICYHLLGLALDIDSLQAE-LSPETSQIEEFRQSLLSSI 249 Query: 226 TG-----SGKTEVYLSVLEN 240 TG KT YLS L + Sbjct: 250 TGKMLFSEAKTLYYLSYLAH 269 >UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL2_SYNWW Length = 802 Score = 681 bits (1759), Expect = 0.0, Method: Composition-based stats. Identities = 248/811 (30%), Positives = 382/811 (47%), Gaps = 93/811 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M V + +P L T+ Y++P + + G RV V G ++ V + D E+ Sbjct: 1 MLGVRVLINLPAMSLDHTYTYIVPPALKEEIAVGKRVLVELGNRKVE-AFVSEILDEGEI 59 Query: 56 PLNEL---KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 N + K V++VLD EP+F H+++ L W AD Y P+ VL P LLR+ + Sbjct: 60 DGNAIAAIKPVLKVLDREPLFDHNLFILAEWMADTYLCPLSLVLKLMTPRLLRKKKAVKV 119 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 P A ++ + S + ++ L L Q A N+ ++AL + Sbjct: 120 TP-----ALKREEIELWRSRLIAQRENDFLDLLLQRGELTLYEAKKFLNNQEIKALVDEN 174 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTE----------QATAVGAIHSAADTFSAWLL 222 L L+ ++ Y + L + QA A+ I + LL Sbjct: 175 LIYLSGNYSSQRVEKSGYVYVLKNFDLARDLPALEKAAPRQAEAIR-IIAKEQEVDCILL 233 Query: 223 A--------------G---------VTGSGKT------EVYLSVLEN------------- 240 G + K E +E Sbjct: 234 EQLIPARSVKSLLEKGYIERQKKKVIVSDKKLQLNREQEAAFRSIEKSLIKADREEFLLF 293 Query: 241 -----------------VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 V+ QG++A+V+VPEI LT +A F R + V+HS + D Sbjct: 294 GVTGSGKTEIYIRSVEKVIEQGRKAIVLVPEIALTRHLLADFSSRIEN-MAVMHSAMPDG 352 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 ER W + + GE +V+GTRSA+F P LG+I+IDEE +SSYKQ+E +YHARD+A Sbjct: 353 ERHDEWRRIRQGEVDLVLGTRSAIFAPLDQLGLIIIDEEQESSYKQEETPKYHARDVARK 412 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG- 402 RA + +++GSATP+L+TL + +LL L +R A+ I V ++K Sbjct: 413 RAELDGAVLLIGSATPSLDTLYRAVKGDMKLLTLKQRIAQAKMPIIQVENMKKVASSHKS 472 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 L+P L+ ++ LQ Q ILF+NRRG++P LC CG I CP C T HQ Sbjct: 473 RVLSPLLLEKLSTTLQRGEQSILFINRRGYSPLSLCRSCGNILSCPSCSVGMTYHQDMGK 532 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 CH+C+ Q P CP CGS H+ +GLGT+++E+ LFP I R+D D++ + G Sbjct: 533 NLCHYCNYQANPPSSCPICGSRHMSHMGLGTQRVEEECRQLFPSAHIQRLDLDSSKKAGF 592 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 E L + R ILIGTQM+AKG +FP V+LV ++D D L DFR+AER QL Q Sbjct: 593 QESILERMERKEIDILIGTQMVAKGLNFPSVSLVGIVDADSMLNLPDFRAAERCIQLLLQ 652 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 AGR+GR+ GEV++QT +P +PL + + Y AF Q + +RR++ PP+T + + Sbjct: 653 AAGRSGRSHLPGEVIIQTFNPANPLFSMIQKQDYLAFFYQEIKQRRLLNYPPFTQLLRIV 712 Query: 641 AEDHNNQHAPLFLQQL-RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 + A + + L R + ++ + +LGP P K R+RWQ+ L+ + + Sbjct: 713 CSAQSLDMARMVAESLSREINDIIDAKEDDIEILGPAPCPLLKIRNRYRWQLTLKCENML 772 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L+ I + + + V+ D++P+ Sbjct: 773 LLKSIARYIIEY----KEFKNVRVEWDLNPV 799 >UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ83_ERYRH Length = 716 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 220/695 (31%), Positives = 339/695 (48%), Gaps = 32/695 (4%) Query: 42 RIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP 101 + V SV + E + + VLD P+ + L LW + Y P+ L LP Sbjct: 45 MVAFVHSVKEPYET-TYTVAPIDSVLDEVPILNQELDDLALWMSYEYMTPMIRCLQTILP 103 Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN 161 L+ A +PKQ L L Q + A ++ Sbjct: 104 NKLKPKSSAGTIKTERVLKLTG----HSMGSDLTPKQCAFLKYLDQNTPLSLKAARHYYS 159 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 D + L +KG + + + + L +Q A+ I S +L Sbjct: 160 D--YRKLIEKGFVEEFEREVTYQEQFIKADYL--KPTLTPDQIEALNKI--QFGVASTYL 213 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKTE+YL+ VL + KQ L+MVPEI LTPQ I R ERF V + HS LN Sbjct: 214 LHGVTGSGKTEIYLNAAAQVLKEQKQVLIMVPEISLTPQMIQRVSERFGEDVAIYHSALN 273 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLA 341 D E+ +++ + + IVIGTRS++F PF++LG+IV+DEEHDSSYKQ + YH RD+A Sbjct: 274 DQEKYEQYVRVQKQQVKIVIGTRSSIFMPFEHLGLIVMDEEHDSSYKQDQVPMYHTRDIA 333 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG---QK 398 + R+ P++LGSA+PALE+ + Y+LL L R + P + ++D + +K Sbjct: 334 IKRSQFHNCPLVLGSASPALESYARALKGNYQLLELNDRINHTFPTVT-LVDTRTALYEK 392 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 L L++ +++ L A QVIL LNRRG+ L + C CD H+ Sbjct: 393 QSPYLTHTLLSGIKKRLSAGEQVILLLNRRGYNTLLKNAITNEVLLCEHCDVALNYHKDD 452 Query: 459 HHLRCHHCD---SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 +RCH C Q P+ P ++ G+GT++L + L +FP I+R+D DTT Sbjct: 453 QTIRCHMCGESYHQLPLVDGKP----PKIIGSGVGTQRLVEELEGIFPKARIARMDADTT 508 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 S+K A ++ L + + IL+GTQM+AKG +VTLV +++ D L +D+RS E Sbjct: 509 SKKNAHQRILNDFINHQSDILVGTQMIAKGLDVENVTLVGIVNADATLAYSDYRSVELTF 568 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 + Q AGR+GR GEV++QT +P+H + + + Y F +Q + R++ PP+ Sbjct: 569 NMLLQAAGRSGRGQYPGEVIIQTSNPDHYAIVCAVNQKYKHFFKQEMEYRKIAGYPPYNY 628 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 + + D + + + + L+ D+ +LGP K + R +I+L+ Sbjct: 629 LISLVFLDEDALKSWRAAEDFQKLL-----NDQDFQILGPTE--LRKLQRKHRTRIILKG 681 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + +I N L L I V+DV+PI Sbjct: 682 KNLESMINICNQALQLYRKI---NGTGVVVDVNPI 713 >UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD9_LIBAP Length = 731 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 233/733 (31%), Positives = 368/733 (50%), Gaps = 28/733 (3%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVV-SVSDASELPLNELKAVV 64 + L + + Y +P M V+ G VRVP + + +GIV + + ++ +L+ + Sbjct: 18 ILLLQAVSGPYIYSVPSAMKVELGSIVRVPL-RSRTVLGIVWYNSEEKYKIDSLKLRPIE 76 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 V D P + + + W ADY P+G V + L + E+ Sbjct: 77 YVFDC-PPLSRQMCEFVKWVADYTFSPMGLVARMVVSALSETEK-----------MEEKI 124 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDLASETPE 182 Q + + + + L ++ GKIW RD + + + + L+ +G+ E Sbjct: 125 QFTGIFPRINTVARLRVLDKIKDGKIWEKRDLIRASQVSSHVIDGLKAQGVIKQIFEV-- 182 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHS-AADTFSAWLLAGVTGSGKTEVYLSVLENV 241 S + + L+ Q V + F+ L++GVTGSGKTEVYL ++ V Sbjct: 183 ISPVVDSPNLYFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAV 242 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 L GKQ L+++PEI LT + RF++RF HS L+ S R W + G ++++ Sbjct: 243 LHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIV 302 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSALF PFK LG+IVIDEEHD SYKQ+EG Y+ARD+++ R E P++L SATP++ Sbjct: 303 GVRSALFLPFKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLVSATPSI 362 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADN 419 E+ N ++Y + L+ R N+ V+D++GQ + G L+P +I +R L + Sbjct: 363 ESRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNE 422 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q +LFLNRRG+AP LC CG +C C + H+++ L CH C + C C Sbjct: 423 QTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVC 482 Query: 480 GST-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 GS+ ++ G G E++ + + FP IS + D G L+ QL+ + +G I+IG Sbjct: 483 GSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIG 542 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQ++AKGH+FP ++LV ++D D L +AD RS+ER QL +QV GRAGR G + ++Q Sbjct: 543 TQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQA 602 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + P HP++Q L+ D+F E + R + LPP+ V Q + L+ Sbjct: 603 YQPTHPVMQALVSGDADSFYESEIRARESVNLPPFGRLAAVIISGTKYQEVENYAYNLKE 662 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 S + V GP + GR+R+++L+ LQ + NTI S Sbjct: 663 HAPRS----SDIVVFGPAESPLFMVRGRYRFRLLIHGKRNSNLQGFFSQMYD--NTIKRS 716 Query: 719 RKVKWVLDVDPIE 731 ++ D+DP Sbjct: 717 NALRVQFDIDPQN 729 >UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWK1_METI4 Length = 635 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 205/626 (32%), Positives = 317/626 (50%), Gaps = 26/626 (4%) Query: 127 VDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKGLCDLASETPEFS 184 + N KR+ K+++ALA L++ R + L +KGL + + Sbjct: 12 LFQNKHKRAKKEKEALAYLQKFHPVRLSELPQKTGIPRRTWNKLLEKGLLRAVLTEKKKA 71 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVL 242 + L EQ A+ I + LL GVTGSGKTEVYL + L Sbjct: 72 SSPPIFPCYTPPQNLTEEQRKALDFIGQQLEDPKPKPILLFGVTGSGKTEVYLHAMARCL 131 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEV--LHSGLNDSERLSAWLKAKNGEAAIV 300 Q KQ L +VPEI LTPQ + R RF + + HS ++ E+ W + + I+ Sbjct: 132 TQKKQVLFLVPEIALTPQLLERIHARFASSYTLGCWHSRISRGEKAHLWNQVLANQIDIL 191 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+F PF++LG+I++DEEH+SS+KQ+E RYH RD+AV R E ++LGSATP+ Sbjct: 192 IGTRSAIFAPFRSLGLIIVDEEHESSFKQEESPRYHGRDVAVMRGRLEGSLVLLGSATPS 251 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--------------LAPA 406 LE+ N KY L+ L +R + + ++DL+ QK +A ++ Sbjct: 252 LESYYNALNAKYNLVELKKRVEERKLPLVSIIDLRKQKQRASKTETQKPLSNTEELISRE 311 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L + + L QVIL++N RG++ +L C CG++ CP C + H+ L CH C Sbjct: 312 LKEAIEKRLDKKEQVILYINHRGYSSSLQCSSCGYVLPCPNCSISLSYHKIPGVLNCHLC 371 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 + P CP C + +G GTE++E+++ LFP I R+D DT +KG LEQ L Sbjct: 372 NYSSSFPSFCPVCKAGKFKFLGSGTEKVEESIRKLFPAARILRMDSDTIRKKGDLEQALR 431 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + IL+GTQM+AKG FP V+LV ++ +D L DFR++E+ Q QV+GR+G Sbjct: 432 AFSQHDYDILVGTQMVAKGLDFPHVSLVGIVSIDSLLHLPDFRASEKSFQQLLQVSGRSG 491 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R +GEV +QT P HP +Q + Y FAEQ L R+ + PP+ +++R + Sbjct: 492 RGSIEGEVYIQTRTPYHPAIQFARHHDYLGFAEQELEFRKSLSYPPFYRAIMIRFVGNPE 551 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLG-PVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + Q L I ++ ++G P PA K ++ +Q+ ++ + + Sbjct: 552 EKVKYLAQVLTREIKEK--IEDDTTLVGTPSPAPIVKVKSQYHYQLFIRSLKVLEASQKL 609 Query: 706 NGTLALINTIPDSRKVKWVLDVDPIE 731 L ++ + +D+DP + Sbjct: 610 REILL---DRKETLGITLRIDIDPQD 632 >UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0I4_9FIRM Length = 804 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 261/812 (32%), Positives = 373/812 (45%), Gaps = 93/812 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVS--DASE 54 M VA V + +P + F Y++P+ + + G RV VPFGK G VV+V DA+ Sbjct: 1 MTVADVYVNIPVKSIATAFTYVVPDALPQIDVGWRVFVPFGK-VRVEGFVVAVRPYDAAR 59 Query: 55 LPLNELKAVVEVLDSEPVFTH------------------SVWRL-------LLWAADY-- 87 + L+A++E +D E FT + RL L + Y Sbjct: 60 DGGHRLRAILEPVDEEAWFTPQLLAAAQELAAFYLCSAAEMMRLFMPGKSGLRIFSAYVP 119 Query: 88 -------------------------YHHPIGDVLFHALPIL------------------L 104 Y G L ALP Sbjct: 120 AKNVDETHPILMDAAARAVYDCLCEYGEQRGAQLRTALPACDVDGALEKLLRYGLIRKEY 179 Query: 105 RQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR-DQVATLEFNDA 163 R R Y+ A E + + L + R P Q++AL R + ++ A Sbjct: 180 RADRRDKAKYEKYYTAGEITEEL-LRAFTRRPAQRRALELFRMEREHTLAELKQAGITTA 238 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWL 221 ++ L + + + L Q AV A+ + A +TF +L Sbjct: 239 TIRHLTDAHILTEHLRRQVRDSYAAGQRETCGE-TLTEAQQRAVAALQAGAAAETFHGYL 297 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKT VY+ V G+Q +V+VPEI LT Q I F+E F + VLHS L+ Sbjct: 298 LHGVTGSGKTRVYMETARAVRRAGRQVIVLVPEIALTGQLITAFQEGFAGDIVVLHSRLS 357 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLA 341 +ER A + + GEA ++IG RSALFTP N+G I++DEE D SYKQ E RYHAR +A Sbjct: 358 LAERNDAIFRVRRGEAGVIIGARSALFTPAGNVGCIILDEEQDMSYKQDESPRYHARVVA 417 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV-- 399 A +++GSATP+LET + LLR+ R G +D++ + Sbjct: 418 EILARRHGAILVMGSATPSLETYARALSGELTLLRMPERIGAQSLPRVRAVDMRAELRLG 477 Query: 400 -QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + L+ L + + L Q I+ LNRRG++ +LC CG++ C C H A Sbjct: 478 RRTILSNDLRDLLTETLARGEQAIIMLNRRGYSTFVLCRACGFVLSCHACGQPMVYH-AD 536 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 L CHHCD + VP CP CGS + G GTE+LE L L P + R+DRDTT RK Sbjct: 537 GTLVCHHCDLRADVPVVCPKCGSRCIKYFGAGTEKLEAELEQLLPQARVIRMDRDTTGRK 596 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 A E+ LA R IL+GTQM+AKGH P V V ++ D +L DFR+AER L Sbjct: 597 HAHEEILARFRRRDYDILLGTQMVAKGHDLPGVQTVGIISADASLNLPDFRAAERCFMLI 656 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 TQ AGRAGR G +GEV++QT++PEH +Q+ L + Y+AF Q + RR + PP + V Sbjct: 657 TQTAGRAGRHGARGEVIVQTYNPEHYAVQSALRQDYEAFYAQEIVLRRELFYPPLSRLVK 716 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 + + Q A ++ + + V+GP PAL K G +R+ +L++ Sbjct: 717 LLFHHMDRQRAWDAAAAFVDVFQKAFHGRQGYMVIGPSPALIAKERGEYRFVVLIKTLVL 776 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +Q + + +D+DPI Sbjct: 777 TDIQKFLRAQGLHLRND-------IAIDIDPI 801 >UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacterium RepID=A5TU64_FUSNP Length = 766 Score = 679 bits (1753), Expect = 0.0, Method: Composition-based stats. Identities = 214/779 (27%), Positives = 380/779 (48%), Gaps = 63/779 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + + Y + + G V VPF + ++ G ++ + ++ Sbjct: 1 MQYFDIYID-SMKGIYTYS-DKNDEFEVGENVIVPF-RNIKKSGFIIRKNLKESFEF-KV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ-------------- 106 + + + ++ +L+ W DYY V+ +P ++ Sbjct: 57 LNISSKVKNSLKLSNEQIKLIEWMVDYYLASYDSVIKAMIPKKIKISYNNIYIINLDRLN 116 Query: 107 -----------GRPAANAPMWYWFATEQGQAVDLNSL---------------------KR 134 + A + Y + + +++L K Sbjct: 117 ILSEYLDNEIINHIFSLATISYNTVKSKFKKPIIDNLINKVFLYKDANNICVNMEKFFKL 176 Query: 135 SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTN--YAV 192 + ++ + I + + +F ++ L +K + + + E D+ ++ V Sbjct: 177 KEENKEIFEYFYKKTIIKKEKLEEKFKKNDIKELEEKEILKIEASISEKKDYSSDNIEKV 236 Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 S + LN +Q I + + +LL GVTGSGKTE+Y+ +++ +G ++ +V Sbjct: 237 SKNKSLLNEKQLAIKENIEKSIKKY--FLLKGVTGSGKTEIYIELIKKAFFEGYGSIFLV 294 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ + RF+ F + +LHS LND ER W G+ IV+G RSA+F+P K Sbjct: 295 PEISLTPQMVERFQSEFKNNIAILHSSLNDIERAKEWESIYTGKKKIVLGVRSAIFSPVK 354 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NL I++DEEH+++YKQ RY+A+ +A+ R E +ILGSATP++E+ + Y Sbjct: 355 NLKYIILDEEHEATYKQDSSPRYNAKYVAIKRCLDEDAKLILGSATPSIESYYYAKTGIY 414 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 LL L R GNA+ V+D+K Q+ + AL+ ++ L + QVIL LNR+G++ Sbjct: 415 ELLSLEDRYGNAQMPDIQVVDMK-QEDDLFFSKALLEEIKNTLLKNEQVILLLNRKGYST 473 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C DCG++ EC C + +++ + +C++C Q +C CGST+L+ G G E Sbjct: 474 YIQCKDCGYVEECDNCSIKMSYYKSTNKYKCNYCGKQIYYTGKCTKCGSTNLIHSGKGIE 533 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E+ L F VP+ ++D + + K + + ILIGTQ++AKG HFP+VT Sbjct: 534 RIEEELKKYF-DVPMIKVDSELSRNKDYFSKIYKDFSDKKYSILIGTQIIAKGLHFPNVT 592 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV +++ D L DFRS E+ QL TQV+GRAGR K+G+V++QT+ PE+ +++ + Sbjct: 593 LVGVINSDIILNFPDFRSGEKTFQLLTQVSGRAGRGDKKGKVIIQTYEPENNVIKDSKEE 652 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 YD F E+ ++ R++ PP++ + + + ++ + I S E + + Sbjct: 653 NYDLFYEKEISSRKVFSYPPFSKILNIGFSSEDEARLLDISKKFYDEIKS-----ENIEL 707 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 GP+P++ K R+R I + S+ ++ +N D+ KV+ V+D+DPI Sbjct: 708 YGPMPSMVYKVQKRFRMNIFAKG-SKKKIDKFKLFLKRKLNEFNDT-KVRIVVDIDPIN 764 >UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS5_9BACE Length = 839 Score = 678 bits (1751), Expect = 0.0, Method: Composition-based stats. Identities = 234/825 (28%), Positives = 365/825 (44%), Gaps = 102/825 (12%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASELP 56 +A VAL + + +DYLLP+ + + G RV +PFG RI GI++++ Sbjct: 21 LAKVALSAATFAIDKPYDYLLPDELRESASPGMRVLIPFGAGNRRIEGIILALGQGQR-- 78 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 +LKAV+ +LD PV +L LW + Y + + LP L + Sbjct: 79 NAKLKAVIALLDDNPVLDSESIQLALWMRERYFCTVYEAARAMLPAGL---YFSLQDQYH 135 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND---AALQALRKKGL 173 ++ A + ++ LA G Q+ A++ L ++G+ Sbjct: 136 IVEGVDKETAYEAAGRSEHARRILDLAYACGGTAEMGQIRGAFGTKDPNPAIRLLTERGI 195 Query: 174 CDLASETPEFSDWRTNYAVS-----GERLRLNTEQAT------AVGAIHSAADTFSAWLL 222 L + +T VS E L L + AV + SA S+ + Sbjct: 196 LTLETSASRGVGDKTEQVVSLAVPPEEALALTAPKRKTAPLRYAVVELLSAIGQASSKEI 255 Query: 223 AGVTG-----------SG-----KTEVYLSVL---------------------------- 238 TG SG K EV+ Sbjct: 256 CYFTGASPATLRSLVKSGLVVMEKREVFRRAAPEQGEPAAPVVLNEEQTAAFEGIDKLCA 315 Query: 239 -------------------------ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 + L +G+ A+V+VPEI LTPQ + F F + Sbjct: 316 AGKSAAALLYGVTGSGKTQVYIRLIQETLKRGRSAMVLVPEIALTPQLLHIFTSHFGDAI 375 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 VLHS L ER W + + G+A +VIGTRSA+F P +NLG+IV+DEE + +YK + Sbjct: 376 AVLHSSLRTGERYDEWKRVRAGKARVVIGTRSAVFAPLQNLGLIVLDEEQEYTYKSENVP 435 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 RYHARD+A +R ++LGSATP++E++ + Y L L R ++D Sbjct: 436 RYHARDVAKFRCARSGGVLLLGSATPSVESMYLAKTGVYHLFTLRSRYNTRALPQVRIVD 495 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 +K + ++ L ++ +L+ Q ILFLNRRG + C +CG + CPRC Sbjct: 496 MKRELRGGNGSDISQQLREELKANLERGEQSILFLNRRGNSRMAACGECGEVPSCPRCTV 555 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 Y T H A L CH+C +P CP CG +G GT+++++ L LFPG + R+ Sbjct: 556 YLTYHSANGRLMCHYCGHSERLPDACPHCGG-SFHFIGTGTQKVQEELEALFPGSEVMRM 614 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DT S + E+ L+ + IL+GTQM+AKG F +VTLV ++ D +L+ D+R+ Sbjct: 615 DTDTVSAVQSHEKLLSRFEKEKVPILVGTQMVAKGLDFENVTLVGVISADLSLYVDDYRA 674 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 ER L TQV GRAGR K G ++QT PE+ ++ T + YD F +Q + RR+ Sbjct: 675 GERTFSLLTQVVGRAGRGEKTGRAIIQTFTPENEVITTAATQDYDTFYQQEITMRRVRGC 734 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS----SPLADEKLWVLGPVPALAPKRGGR 686 PP+ ++ A +LR + S + +LGP PA K R Sbjct: 735 PPFRDLFVLTASGTEESRVLRMCVRLRRTLESWFADPAYQGLDVQLLGPAPASVAKVNNR 794 Query: 687 WRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 +R+++ + + ++ ++ L + + R V DVDP++ Sbjct: 795 YRYRLTISGHNSKTMRALVAALLCAAHNDKEMRGVSVFADVDPMD 839 >UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHU0_DESAH Length = 815 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 229/608 (37%), Positives = 338/608 (55%), Gaps = 13/608 (2%) Query: 133 KRSPKQQQALAALRQGKIWRDQVATLEFNDAA--LQALRKKGLCDLASETPEFSDWRTNY 190 + S K++Q L +R+ + E A ++ L G ++ F D + Sbjct: 206 RMSAKRRQILEIVREKGEISLTLLKQEVPTAPKLVKILAGAGYLEVIERQV-FRDPLGDP 264 Query: 191 AVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL 249 L EQA V + S D FS +LL+GVTGSGKTEVYL ++ + +G+ AL Sbjct: 265 VDPDVPPELMDEQAGVVNQVISEMDKGFSRYLLSGVTGSGKTEVYLRLVTEAMDRGQGAL 324 Query: 250 VMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 V+VPEI L QT RFR RF + VLHSGL ERL W + G+A IVIG RS++F Sbjct: 325 VLVPEISLISQTERRFRARFGKKIAVLHSGLTMGERLDQWNRIMTGDAVIVIGVRSSVFA 384 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 P NLG+I++DEEHD+SYKQ+ G RY+ARD+AV RA E IP++LGSATP++++ NV + Sbjct: 385 PINNLGIIIVDEEHDTSYKQETGLRYNARDIAVVRAKIENIPVVLGSATPSVQSYYNVCE 444 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL----APALITRMRQHLQADNQVILFL 425 +++ L+LT+R ++DLK K G+ P L + L+ Q ++FL Sbjct: 445 GRFKELKLTKRVNCHPLPEIELVDLKRYKDFRGIERIITPELSRGIGHCLERGEQALIFL 504 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRGFA +C C +C CD TLH + RCH C + + CP+C + + Sbjct: 505 NRRGFATYPVCQACNEPVKCKFCDLTMTLHMDTNEFRCHLCGFSMSMNQPCPNCNARRIK 564 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 P+G GTE++E L LFP ++R+D+DT S+KGA+ L +V I+IGTQMLAKG Sbjct: 565 PLGFGTERIENMLQVLFPDARVARLDQDTGSKKGAMVSILKKVKHRTVDIIIGTQMLAKG 624 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H FP +TLV ++ D +L DFR+ ER QL QVAGRAGR ++G VV+QT++PEH Sbjct: 625 HDFPFITLVGVICADLSLNFPDFRAGERTFQLLAQVAGRAGRGDRKGRVVMQTYNPEHFS 684 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL----QQLRNLIL 661 ++ + + F + + R+ + PP + + ++ + + ++ + L+ Sbjct: 685 IEASKNQDFVEFYHKEIPFRKGLGYPPVSRIIQLKISGLDKDKVKVHALFVGEECKRLVD 744 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 + +LGP+ A PK R+RWQILL+ P L ++ LA + +R+V Sbjct: 745 QDRENGHLVQILGPIEAGIPKIAMRYRWQILLKSPRATLLNRLVRAMLAE-KKVFANREV 803 Query: 722 KWVLDVDP 729 +DVDP Sbjct: 804 TVGIDVDP 811 Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats. Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 18/231 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A+ +P+ TF Y LP + + G RV VPFG ++ G V+ E + Sbjct: 6 FIEIAVALPVHGTFTYTLPLDLAAEAIPGMRVLVPFGNRRV-TGYVLGPGH--ENTEFKA 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + +LD P+F ++ L W +DYY HP+G+V+ ALP +G + Sbjct: 63 KPIQGLLDEAPLFPPAMIELFRWVSDYYIHPLGEVIKAALP----KGLNRYDVSFLSLVE 118 Query: 121 TEQGQAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDAA---LQALRKKGLCDL 176 + SP++Q + L ++G + + N + ++ L +KG+ Sbjct: 119 KPGNLPDLPDLPDLSPREQAVVDLLKKKGSVSVKSLVGRGKNPSVSALVRRLIQKGVIQQ 178 Query: 177 ASETPEFS-----DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 A+ + + GE + + + + I S LL Sbjct: 179 AARLKKDQIQMKTEKFILPTGQGEPMERMSAKRRQILEIVREKGEISLTLL 229 >UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacteria RepID=A5V2S3_SPHWW Length = 734 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 247/738 (33%), Positives = 366/738 (49%), Gaps = 29/738 (3%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVS---VSDASELPL 57 M AHV L P DY V+ G V P G +Q +G+V + A ++ Sbjct: 13 MARAHVLLLNPALGPLDYRADREHVVEPGSIVLAPLGPRQ-MVGVVWEEETLPSADQVGD 71 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N L+ +++V D P + RL+ W +DYY P VL ALP Sbjct: 72 NRLRPLLDVYD-VPPLAAPLRRLIEWTSDYYLAPPAAVLRMALPSSSALDGARTIV---- 126 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + +A + +P+++QAL + ++ + R+ + ++ ++ L K G + Sbjct: 127 -----EYRATGERPGRMTPQREQALDRIGQRQGLIRELATIADVSEGVIRGLVKSGAIEA 181 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVY 234 T + + L+ EQ A G + A A F +LL GVTGSGKTEVY Sbjct: 182 V--TVSIDTPWDAPDPDHKAVELSDEQQLAAGMLAEAVAAKRFQPFLLDGVTGSGKTEVY 239 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 + L G+Q LV++PEI LT + RF RF HS L S+R AW + Sbjct: 240 FEAVAEALRAGRQTLVLLPEIALTEPFLKRFEARFGHLPVAWHSELRQSQRRRAWRGIVH 299 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+G RSALF P+++LG+I++DE H++S+KQ++G YHARD+AV RA E+IPI+L Sbjct: 300 GEAKVVVGARSALFLPYRDLGLIIVDEAHETSFKQEDGVLYHARDVAVMRAKLEEIPIVL 359 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMR 412 SATPA+ET +Y L+LT R G A +DL G +AP L+ + Sbjct: 360 ASATPAIETRQQATIGRYTELKLTARHGAAEMPEIEAIDLLADPPPRGRWIAPTLVRALA 419 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 L+ Q +LFLNRRG+AP LC CG +CP C + H+ L+CHHC Sbjct: 420 DRLEKKEQSLLFLNRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLLGRLQCHHCGHSMAP 479 Query: 473 PRQCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 P +CP C LV G G E++ +A LFP ++ DT S + + + G Sbjct: 480 PAECPECKDEDSLVACGPGVERIADEVAALFPDARVAIATSDTLSTPARAAEFVERMEAG 539 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 +++GTQ++ KG+HFP++TLV ++D D L D R+AER Q QVAGRAGR K Sbjct: 540 DIDVVVGTQLVTKGYHFPELTLVGVIDADLGLSGGDLRAAERSFQQIAQVAGRAGRGAKP 599 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V +QTH P+ P++Q LL +F R++ + PP+ + + + A Sbjct: 600 GHVYIQTHAPKAPVIQALLSGDAQSFYTAETEARKIAEAPPFGRYAAIIISAEKLEEAAT 659 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 + LI + A + + V GP PA GR R ++L+ + +Q +I L Sbjct: 660 TAR----LIGRTAPAIDGMHVYGPAPAPLAMLRGRHRQRLLVHARRSLDVQQVIRDWLGP 715 Query: 712 INTIPDSRKVKWVLDVDP 729 + R V+ +DVDP Sbjct: 716 LQW---PRGVRVAVDVDP 730 >UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJK3_9SPHI Length = 804 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 215/644 (33%), Positives = 341/644 (52%), Gaps = 26/644 (4%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALA------------ALRQGKIWRDQV 155 + + + + V L L++ PKQQ+ + AL + + + + Sbjct: 162 KMVRKIRLHRNYEKREQLLVLLQRLEKLPKQQEVVMRYLSHVPLQRTPALNEKGLDKTIL 221 Query: 156 ATL-EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA 214 E + ++L L K + + + ++L Q TA I + Sbjct: 222 NQDDELSQSSLATLLKNQVFETFDVIQPRFSDNGSPDGLQTEIKLTDAQRTASNQIMAQF 281 Query: 215 DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 D + LL G+TGSGKTEVY+ +++ L G Q L ++PEI LT Q + R + F + Sbjct: 282 DQHNVVLLHGITGSGKTEVYIDLIQQALGSGSQVLYLLPEIALTTQIVVRLQRVFGDKMG 341 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GW 333 + HS +D+ER+ W +G+ V+G RSA+F PF NLG+I++DEEH++SYKQ + Sbjct: 342 IYHSKFSDNERVEVWKGVVSGQYQFVVGVRSAVFLPFDNLGLIIVDEEHETSYKQHDPAP 401 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 RYHARD+A+ AH +Q ++LGSATP+LET +Q +Y L+ L +R G+A +++ Sbjct: 402 RYHARDVAIMLAHWQQAKVLLGSATPSLETYYQAKQGRYGLVELFQRFGDATLPNIMLVN 461 Query: 394 LKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 ++ +K ++ + L+ + +++ Q ILF NRRG++P + C DC W AECP C Sbjct: 462 MQQEKKQKTLRNEFSSVLLGALEANMERKEQSILFQNRRGYSPYMQCEDCDWTAECPNCA 521 Query: 450 HYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISR 509 T HQ LRCH+C + VPR CP+CGST + +G GTE+LE L FP + R Sbjct: 522 VSLTYHQRDAELRCHYCGHKEGVPRMCPTCGSTKVKTIGFGTEKLEDQLQIFFPQSRVLR 581 Query: 510 IDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFR 569 +D DTT K A +Q + E G IL+GTQM+ KG F +V+LV + D D + DFR Sbjct: 582 MDLDTTRAKNAYQQIIQEFEGGQVDILVGTQMITKGLDFDNVSLVGIFDADRLIHFPDFR 641 Query: 570 SAERFAQLYTQVAGRAG-RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 + ER Q+ TQV+GRAG RAG+QG V++QT +P+ P+LQ ++ Y + L ER+ Sbjct: 642 ATERAFQMITQVSGRAGRRAGRQGTVLIQTSNPQQPILQKVIDNDYKGLFTEELQERQDF 701 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 PP++ + + + + ++L ++ + + VLGP L + ++ Sbjct: 702 NYPPFSRLIKLTVRHTDRAISHQAAERLAAELVDALGSS---RVLGPEEPLVERIRNQFL 758 Query: 689 WQILLQ-HPSRVRLQHIINGTLALINTI---PDSRKVKWVLDVD 728 + IL++ +V ++ + IN I R+V V DVD Sbjct: 759 FDILIKIERDKVNIKAVKTYIQDRINDILTDKGLRQVSIVADVD 802 Score = 89.1 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 8/159 (5%) Query: 26 VKAGCRVRVPFGKQQERI--GIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLW 83 +K G RV VPFGK+ R+ IV + + + + + E LD P+ T L W Sbjct: 5 LKIGARVIVPFGKKNGRVFTAIVAKLHNTPPT-GYQARYINETLDEYPLTTSYQLELFRW 63 Query: 84 AADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALA 143 ADYY IG+V+ ALP L+ + + + + +L K+ AL+ Sbjct: 64 IADYYMCCIGEVMNVALPSGLKISSQSKVQFNPDF-SYPELLTELEETLLTELKKHPALS 122 Query: 144 ALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 G++ D V A +++L +K + E E Sbjct: 123 YDEVGRLAGDGVNV----AALIKSLVEKKAIIVFEEVRE 157 >UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales RepID=C6VSU2_DYAFD Length = 831 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 212/646 (32%), Positives = 339/646 (52%), Gaps = 28/646 (4%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR-------------QGKIWR 152 + + A + + T + + L ++PKQQ+ L +G Sbjct: 189 KPKVAKKIRLTAAYTTNEALSKLAADLDKTPKQQEILLKYLSFIPVYNNPELNYKGLDKS 248 Query: 153 DQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 +DA+L L KKG+ + S + A + + L Q A IH Sbjct: 249 IFSQDDTISDASLNTLIKKGIFEQFEVFV--SRFDDIPAGNMGTITLTDTQQEAFRQIHE 306 Query: 213 AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP 272 LL G+TGSGKTEVY+ +++ L G Q L ++PEI LT Q + R R+ F Sbjct: 307 LFAEKEVVLLHGITGSGKTEVYIELIKQALESGSQVLFLLPEIALTTQIVVRLRKVFGDV 366 Query: 273 VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE- 331 + + HS +D+ER+ W +G+ V+G RSA+F PF NLG++++DEEH++SYKQ + Sbjct: 367 MGIYHSKFSDNERVEVWKGILDGKFQFVVGVRSAIFLPFDNLGLVIVDEEHETSYKQHDP 426 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 RY+ARD+AV ++ + +LGSATP+LE+ + Q +Y +++ +R GNA + Sbjct: 427 APRYNARDVAVIMSYMHKGKTLLGSATPSLESYFHAQSGRYGFVQMKQRYGNAALPRFEL 486 Query: 392 LDLKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 +D K +K ++ + L++ + +L+ Q ILF NRRG++P L C +C WI+EC Sbjct: 487 IDTKKEKRQKQMKNEFSSVLLSHLEYNLKNKEQTILFQNRRGYSPYLQCEECNWISECAN 546 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T H LRCH+C + VPR CP CGS + +G GTE++E+ + ++P + Sbjct: 547 CDVSLTYHMKARELRCHYCGHKEEVPRTCPHCGSPKVKTMGYGTEKIEEEINVMYPEARV 606 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+D DTT K A +Q +++ GG IL+GTQM++KG F +V++V + D D + + Sbjct: 607 QRMDLDTTRAKNAYQQIISDFEEGGIDILVGTQMVSKGLDFDNVSVVGIFDADRIIHFPE 666 Query: 568 FRSAERFAQLYTQVAGRAG-RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERR 626 FR++ER Q+ TQV+GRAG RA K G+V++QT +P PLL+ ++ Y+ E +AER Sbjct: 667 FRASERAFQMLTQVSGRAGRRADKPGKVLIQTANPSQPLLEKIINNDYEGMYEAEIAERE 726 Query: 627 MMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGR 686 PP+T + V + + A + L + S A VLGP P L + + Sbjct: 727 KFSYPPFTRLIKVTVKHIDEGTALRAAKVLAEKLTSHLGAS---RVLGPQPPLVERVRNQ 783 Query: 687 WRWQILLQHPSR----VRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + + IL++ + I + T + ++ V+DVD Sbjct: 784 FLFDILIKLEREKINFKAAKSFIQEKVIDTLTDKTLKSIQVVIDVD 829 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 50/222 (22%), Positives = 86/222 (38%), Gaps = 9/222 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A + LPVP+P F Y +P M +K G RV V FG+++ +V + + + Sbjct: 12 FADLILPVPIPNLFTYRVPREMASLIKVGARVIVQFGQKRVITAVVAQLHSNPPVK-YQA 70 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++E+LD +P+ T L W A+YY IG+V+ ALP L+ + + F Sbjct: 71 KYILELLDEQPIVTQQQLELFAWVAEYYLCNIGEVMNVALPAGLKIT-SQSRIQLNPEFE 129 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 E + K+ Q L+ +++ + +++L K L E Sbjct: 130 HEDLLTDQEQLVVEEIKKHQTLSY-----EEVERLLQKSNITSIIKSLVGKRAVILYEEV 184 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 E + + E + + A LL Sbjct: 185 KERYKPKVAKKIRLTAAYTTNEALSKLAADLDKTPKQQEILL 226 >UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTX7_PEDHD Length = 824 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 208/626 (33%), Positives = 324/626 (51%), Gaps = 20/626 (3%) Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR------DQVATLEFNDAALQALRKK 171 ++ E+ L+R+PKQ AL + + + + AA + L K Sbjct: 204 FYREEENLKQLFTILERAPKQLNALLTFIKLSRQQNLVSKSQLLEESDCGQAAFKTLLDK 263 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 + + S + N L+ Q A+ I + LL G+T SGKT Sbjct: 264 EIFTVEKRPV--SRLKDNDEDFVLNFELSAAQQQALTGIEMEFERKDVVLLHGITASGKT 321 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 ++Y+ ++E + QG Q L ++PEI LT Q + R + F + V HS N++ER+ W K Sbjct: 322 QIYIKLIEKAIEQGGQVLFLLPEIALTTQIVQRIQRYFGDAIGVYHSKFNNNERVEIWNK 381 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQI 350 NG+ +V+G RSA+F PFK L +IV+DEEH+SSYKQQE RY ARD+AVY AH Q Sbjct: 382 VLNGKYRVVLGARSAVFLPFKELKLIVVDEEHESSYKQQEPSPRYQARDVAVYMAHLHQA 441 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL----DLKGQKVQAGLAPA 406 +LGSATP++E+ N +KY L+ L R G + V+ + K +K+ + + Sbjct: 442 KTVLGSATPSIESYYNAISQKYGLVTLNERFGGVELPLHEVVSISEETKKKKMVSYFSGK 501 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LI + L+ QVILF NRRG+A L+C CG+ +C CD T H+ L CH+C Sbjct: 502 LIEGISLALEQKEQVILFQNRRGYATILICATCGYAPKCVNCDVSLTYHKTSGKLHCHYC 561 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 + CP+CGS H+ G GTE++E+ L+ +FP I+R+D D+T + L+Q ++ Sbjct: 562 GYHQSSINICPACGSVHIEQKGFGTERVEEELSLVFPDAKIARLDVDSTRTRNGLQQLIS 621 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + ILIGTQM+AKG F +VTL+ +++ D L DFR+ ER QL QVAGRAG Sbjct: 622 DFQEKKTDILIGTQMVAKGLDFDNVTLIGVINADTLLNYPDFRAFERSYQLLAQVAGRAG 681 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R KQG+V++Q + H +++ ++ Y + LAER PP+T + V + + Sbjct: 682 RRDKQGKVIIQAYDDSHRIIRQVMENQYLEMYKDELAERLQFHYPPFTRLIFVNIKHKDQ 741 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH--- 703 + Q+ ++ + VLGP + + + Q++++ +Q Sbjct: 742 DLLNMAAQRFATILRAQLGP----RVLGPEQPMVARIRNYYIKQVIIKTDKDTSVQKVKS 797 Query: 704 IINGTLALINTIPDSRKVKWVLDVDP 729 ++ T+ + + R V +DVDP Sbjct: 798 VLKNTILDFQSEKEYRSVNIQVDVDP 823 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 50/226 (22%), Positives = 82/226 (36%), Gaps = 17/226 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ L + + Y +P + V G RV V FGK + ++ ++S + L + Sbjct: 15 FVEVILPLSLAKNYLYRVPFDLNSEVAIGKRVVVQFGKNKIYTALIKTISQTAPR-LYQA 73 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K +++V+D +PV T +L W YY GDV+ ALP L+ Sbjct: 74 KYIIDVVDEQPVITTLQLQLWDWMTGYYLCNEGDVMSAALPTGLKLASETIIVL------ 127 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWR----DQVATLEFNDAALQALRKKGLCDL 176 + L + K++ + AL K + + + L +K L + Sbjct: 128 ----KEEALQEKVLTEKERILMDALNHQKRLTIADVSALLGQKTVYPIINTLLEKALVYV 183 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 A E E V+ E + I A LL Sbjct: 184 AEEVVEKYRPLLKSFVALNAFYREEENLKQLFTILERAPKQLNALL 229 >UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECY8_9SPHI Length = 821 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 210/677 (31%), Positives = 329/677 (48%), Gaps = 27/677 (3%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V V+++ + + + + Y P+ P + + + Sbjct: 163 KTVYPVINT--LLEKEMIYIAEEVVEKYK-PLMKSFVVINPFYQEEEHLRSLFELLEPKP 219 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + L R KQ + + ++ + L K + + Sbjct: 220 KHLNVLLTYLRLARLQKQ----------VPKHQLLEESDCSEGTFKTLLNKEIFVVNKLP 269 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + V L+ Q A I ++ + LL GVT SGKT++Y+ ++E Sbjct: 270 VSRLKHHEDDFVL--NFTLSEAQQKAFEEIGTSFEEKDVVLLHGVTASGKTQIYIKLIEQ 327 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 + +G Q L ++PEI LT Q + R + F + V HS N++ER+ W K NG+ +V Sbjct: 328 AIEKGGQVLFLLPEIALTTQIVDRIQRYFGDAIGVYHSKFNNNERVEIWNKVLNGKYRVV 387 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATP 359 +G RSA+F PF++L +IV+DEEH+ SYKQQ+ RY ARD AVY AH + I+LGSATP Sbjct: 388 LGARSAVFLPFQDLKLIVVDEEHEPSYKQQDPAPRYQARDAAVYLAHLHKAKIVLGSATP 447 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGLAPALITRMRQHL 415 +LE+ N KKY L+ L+ R G +Q V+ + + + + + LI + L Sbjct: 448 SLESYFNALMKKYGLVTLSERFGGVELPVQEVISISEETKRKKMVSYFSSKLIEEIDAAL 507 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 Q QVILF NRRG+A L+C CG+ +C CD T H+ L CH+C + Sbjct: 508 QLKEQVILFQNRRGYATILICATCGYAPKCVNCDVSLTYHKTSGKLHCHYCGYHQNSINI 567 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP+CGS H+ G GTE++E+ L+ +FP I+R+D D+T K L+Q ++ I Sbjct: 568 CPACGSVHVEQKGFGTERVEEELSLIFPDAKIARLDVDSTRTKNGLQQIISGFQEKKTDI 627 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQM+AKG F +VTL+ +++ D L DFR+ ER QL QVAGRAGR KQG+VV Sbjct: 628 LIGTQMVAKGLDFDNVTLIGVINADTLLNYPDFRAFERSYQLLAQVAGRAGRRDKQGKVV 687 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +Q + H ++ ++ Y E + ERR PP+T + V + + + QQ Sbjct: 688 IQAYDDHHRIIAQVMDNKYFEMFEDEIRERREFNYPPFTRMIFVDIKHKDMNLLNVAAQQ 747 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI---INGTLALI 712 N++ + VLGP L + + Q++++ ++ + + T+ Sbjct: 748 FANVLKGQLGS----RVLGPEQPLVGRVRNYYIKQVIIKSDKNTDIKKVKTILKDTIQQF 803 Query: 713 NTIPDSRKVKWVLDVDP 729 + R V +DVDP Sbjct: 804 QAQKEYRGVLVRIDVDP 820 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 51/243 (20%), Positives = 87/243 (35%), Gaps = 26/243 (10%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ L + Y +P + + G RV V FGK + ++ S+ D + + Sbjct: 11 FVEVILPLSLAINYTYRVPFELNAQVAVGKRVVVQFGKNKIYTALIRSIGDQPP-KVYQA 69 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K +++V+D PV T + W DYY G+V+ ALP L+ Sbjct: 70 KYIIDVVDEHPVITPVQLQFWEWMMDYYICNEGEVMAAALPASLKLASET---------I 120 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALR-QGKIWRDQVATLEFNDA---ALQALRKKGLCDL 176 + + + KQ+ L +L+ G++ DQV+ L + L +K + + Sbjct: 121 IVLKDEIPSDGEVLNAKQETILNSLKLHGRLTIDQVSGLLGQKTVYPVINTLLEKEMIYI 180 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 A E E V E ++ + LL YL Sbjct: 181 AEEVVEKYKPLMKSFVVINPFYQEEEHLRSLFELLEPKPKHLNVLL----------TYLR 230 Query: 237 VLE 239 + Sbjct: 231 LAR 233 >UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT54_CHLT3 Length = 829 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 223/631 (35%), Positives = 319/631 (50%), Gaps = 9/631 (1%) Query: 105 RQGRPAANAPMWYWFATEQGQAVDL-NSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA 163 R+G+P + + L L+R+ KQ + + + R L + Sbjct: 196 RKGKPKLKTAYTLCKNFSEDEISSLKEDLQRAKKQAEVFERILAFEQKRFFKEELSASGQ 255 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWL 221 L AL ++G+ + +R+ + + + L Q I +A F +L Sbjct: 256 ILDALCQRGILAKEKVDVS-AQYRSVFRETSAKKPLTAAQEPVYEKIRAALQAAAFRTFL 314 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKT +Y+ + L GK ALV+VPEI LTPQ ARF+ F + VLHS +N Sbjct: 315 LHGVTGSGKTRIYIEAIRETLGAGKSALVLVPEISLTPQIAARFQAFFGDNLRVLHSAMN 374 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDL 340 SE+ AW K G+A + +G RSA+F P +NLG++++DEEH+SSYKQ + RYHARD Sbjct: 375 GSEKFEAWESLKTGKARVALGPRSAVFAPLENLGLVIVDEEHESSYKQFDKPPRYHARDT 434 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKV 399 A+ RA E +LGSATP+ E+ N KY LL L+ RA G P I+ V K K Sbjct: 435 AIMRAKLEGAVCVLGSATPSFESYYNALSGKYELLTLSERADGAVAPEIKLVHFPKSAKK 494 Query: 400 QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 L+ L + + + Q ILFLNRRGFA ++ C CG+IA C C H + Sbjct: 495 SQNLSQPLFEEIEKRHASGEQSILFLNRRGFAGSVRCEKCGFIAMCSDCHVPLVYHFQKA 554 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 HLRCH+C CP CG+ L GTE++E L LFP ISR+D DTT+ K Sbjct: 555 HLRCHYCGKVADTLHTCPKCGAKDLTLKSSGTERIEIELGQLFPPDDISRMDLDTTAGKD 614 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 + L + G +IL+GTQM+AKG FP+VTLV +++ D L DFR++ER L Sbjct: 615 KHAEILKDFQTGKTKILLGTQMVAKGLDFPNVTLVGVINADIGLTLPDFRASERLFALLL 674 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QVAGRAGR KQGEV +Q + E + + + Y+ F + R+ + PP++ + Sbjct: 675 QVAGRAGRGKKQGEVFMQVFNLESEVFRFVAKGDYEIFYNYEIESRKELFYPPFSRLAKI 734 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 +++ L E +LGP PA+ K GR+R QIL++ Sbjct: 735 EFSGEEENEVASAAADFAKILIRD-LDPESFDILGPAPAVMAKLKGRYRHQILIKQKGTT 793 Query: 700 RLQHII--NGTLALINTIPDSRKVKWVLDVD 728 + + N + KV+ +DVD Sbjct: 794 LISKKLFRKMQFEFRNESKFAAKVRLDIDVD 824 Score = 74.9 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 47/219 (21%), Positives = 82/219 (37%), Gaps = 34/219 (15%) Query: 18 YLLPE-GMTVKAGCRVRVP-FGKQ-QERIGIVVSVSDASELPLNELKAVVEVLD----SE 70 Y PE ++ G RV + G++ +E +G V V++ ++ K E++D E Sbjct: 31 YASPELHEMIQPGSRVLIKIVGRKSKEVLGFVREVANG----VSGAKPAAEIVDVFERGE 86 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P+F+ ++ L+ W A+YY + L ALP LR + +E V + Sbjct: 87 PLFSPKLFGLIQWLANYYICRPIEALHAALPAELRVKPVEKVFLKPFELRSEPETIVKTD 146 Query: 131 SLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDA---ALQALRKKGLCDLASETPEFSDW 186 KR L+ L +Q + Q+ + + AL L G +L Sbjct: 147 LRKR------ILSYLEKQSPLTVKQLQNRTQSKSLRLALTQLEAAGYIELKKSYARKGKP 200 Query: 187 RTNYAVS-------------GERLRLNTEQATAVGAIHS 212 + A + E L+ +QA I + Sbjct: 201 KLKTAYTLCKNFSEDEISSLKEDLQRAKKQAEVFERILA 239 >UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1V8_9DELT Length = 856 Score = 673 bits (1738), Expect = 0.0, Method: Composition-based stats. Identities = 225/624 (36%), Positives = 324/624 (51%), Gaps = 15/624 (2%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQ-------GKIWRDQVATLEFNDAALQALRKK 171 T++G +S+ P + + LA L + G R+ + AL+ L + Sbjct: 231 HTTKKGSDPFSSSVALKPSEDKTLALLTELAANNPNGVPRRELLKRYPGAGRALKGLLAR 290 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSG 229 + + RL EQ+ + + A + ++ +LL G+TGSG Sbjct: 291 NQISTFEQRRYRDPFGEAPPFFPRPERLTDEQSAVMARLTPAIEGRQYTPFLLHGITGSG 350 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTE+YL E LA G+Q LV+VPEI L Q F RF V +LHSGL+ +R W Sbjct: 351 KTEIYLRAAEAALAAGRQVLVLVPEIALATQLEGHFCSRFGNAVALLHSGLSGGQRYDQW 410 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 +GEA I IG RSA+F P + G+I++DEEHD +YKQ++G RY+ARDLA+ R +Q Sbjct: 411 SLLLSGEAQIAIGARSAIFAPLADPGLIIVDEEHDPAYKQEDGLRYNARDLALLRGVKQQ 470 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAP 405 ++LGSATPA+ + +Q K+ LL++TRR + ++DLK + +G +P Sbjct: 471 ATVLLGSATPAVSSYHAARQGKFELLQMTRRVEDRPLPAVEIVDLKAVRTVSGLPPLFSP 530 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 LI +R++L A Q ++FLNRRGFA +LC DCG +C C T H+ L CHH Sbjct: 531 QLIRALRENLAAGQQSLVFLNRRGFANLVLCKDCGRPVQCRHCQVTLTYHKKADLLLCHH 590 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C ++P C C S LVP G GTE+LE+ L FP ++R+D+DT+ + + L Sbjct: 591 CGYRQPRASLCGHCHSGTLVPAGFGTERLEEELRRHFPAARLARLDQDTSRDRKEFLKVL 650 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 V ILIGTQM+ KGHHFP VTLV ++ D L D+++AER QL TQV GRA Sbjct: 651 KAVRDHEVDILIGTQMITKGHHFPRVTLVGIVWADAGLGIPDYKAAERTFQLLTQVTGRA 710 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR + G V++QT EH + Y EQ +A R+ + PPW + +R + Sbjct: 711 GRGEQPGRVLVQTLQSEHYSIALARAHDYQGLYEQEIALRQRLGFPPWGRLINLRFDGEK 770 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + +L + AD + VLGP PA + R+RWQ+LL+ L + Sbjct: 771 EEKVRELALRLGEIARGR--ADSGIKVLGPAPAPLSRLKDRFRWQLLLKGRGVAPLHRLC 828 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L + + VK LDVDP Sbjct: 829 QALLGEYARLAGASTVKLSLDVDP 852 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 14/203 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASEL------ 55 VA+ P+ +T Y P G+ + G R+ VP G++Q G ++ + Sbjct: 8 YFEVAVAAPIHQTLTYAPPAGVAQLPPGHRLLVPLGRRQV-TGYLLDCAAQPPALKDGGN 66 Query: 56 ---PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL--LRQGRPA 110 P +++A +EVLD EP+F ++ W ADYYHHPIG+V+ +ALP R R Sbjct: 67 DRQPGGKIRAALEVLDDEPLFPAAMVPFFRWIADYYHHPIGEVIQNALPAGLSRRSTRII 126 Query: 111 ANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT-LEFNDAALQALR 169 Q+ P L +G++ + AT + L+ + Sbjct: 127 KLTDRGAEKLPSLAQSTASKRNSPLPLSDWLPELLARGELSATKSATVIRRRPPELKRWQ 186 Query: 170 KKGLCDLASETPEFSDWRTNYAV 192 +GL ++ + S + Sbjct: 187 DEGLIEIDNRLRRESVRAQTETI 209 >UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria RepID=PRIA_SYNY3 Length = 831 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 230/616 (37%), Positives = 330/616 (53%), Gaps = 24/616 (3%) Query: 130 NSLKRSPKQQQALAALRQ--GKIW-RDQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 S K + Q + L L+ G++W D + + + + +Q+L KKGL +A + Sbjct: 222 PSFKLTELQARTLIVLKNQGGEMWLADLLKAVPCSASTIQSLAKKGLVAIAEREK-LRLF 280 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK 246 + + + L Q A + + LL GVTGSGKTEVYL + + L +G+ Sbjct: 281 QQPSINASQAPELTPAQKQACQTVLP-LQGYHQVLLHGVTGSGKTEVYLQICGDRLGKGQ 339 Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 LV+VPEIGLTPQ RFR RF V V HSGL+ E+ W + G IVIGTRSA Sbjct: 340 SVLVLVPEIGLTPQLTDRFRARFGNKVAVYHSGLSSGEKYDTWRQTLLGHEQIVIGTRSA 399 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQ-QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 +FTP NLG+I++DEEHDSS+KQ Q YHAR +A RA EQ P+ILGSATP+LE+ Sbjct: 400 IFTPLPNLGLIILDEEHDSSFKQTQLTPNYHARTVAQRRAELEQCPLILGSATPSLESWH 459 Query: 366 NVQQ----KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQAD 418 V + + L L R + ++D++ + Q + AL T + + Sbjct: 460 TVHRHQNDPQRHYLELPERVQSRPLPPVQIVDMRAELKQGNRSIFSRALQTALGELKAKQ 519 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH----QAQHHLRCHHCDSQRPVPR 474 Q ILF+NRRG + + C CG++ ECP CD + H Q LRCH+C+ P+ Sbjct: 520 QQGILFINRRGHSTFVSCRSCGYVLECPNCDVSLSYHYVQGNGQPLLRCHYCNHAEIQPK 579 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP C S +L G GT+++ + L FP + R D DTT RKGA L + RG A Sbjct: 580 VCPECSSPYLKFFGSGTQKVTEALTQEFPDLRWIRFDSDTTRRKGAHRALLDQFQRGEAD 639 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 +L+GTQML KG +TLV ++ D L AD+RSAER Q TQV+GRAGR + G+V Sbjct: 640 LLVGTQMLTKGLDLAQITLVGVVAADSLLNFADYRSAERGFQTLTQVSGRAGRGEEPGQV 699 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT+ P HP++Q + Y F Q L +R M+ PP+ +++R N + +Q Sbjct: 700 IIQTYTPRHPVIQAVKTHNYHGFIAQELPQREMLNYPPYGKLILLRCLGTNEREVEKTIQ 759 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + +L L + + +LGP PA + R+RWQ+L+++PS +I + Sbjct: 760 AIA--VLCEQLLPKTVEILGPAPASILRIAQRYRWQLLVKYPS---FIKVILPLERIKQI 814 Query: 715 IPDSRKVKWVLDVDPI 730 P S V +DVDP+ Sbjct: 815 CPSS--VYLDIDVDPL 828 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 28/232 (12%) Query: 2 PVAHVALPVPLP-RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLN 58 P A V + +P + Y +P G+TV+ G V VPFG QQ GIVV +LP Sbjct: 23 PWAAVLVDLPQNEGVYTYAIPPGLTVQDGDIVAVPFGNQQ-LGGIVVGCLTKLPPDLPPE 81 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ----------GR 108 ++K + +V+ S F WRLL W A+YY + V+ ALP L Q R Sbjct: 82 KIKPIQDVIVSG-FFAPHYWRLLHWLAEYYCTELITVIRMALPPGLLQRSQRRIKLNGDR 140 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 ++ P++ + QG L L+ S + + LRQ AL+ L Sbjct: 141 LPSDWPLFLSQPSHQGARQILTLLQSSKEGDYSYRYLRQKVPGLT---------KALRDL 191 Query: 169 RKKGLCDLASETPEFSDWRTNYAVS----GERLRLNTEQATAVGAIHSAADT 216 K+ + E P+ + V+ +L QA + + + Sbjct: 192 LKRQWVESYLEPPKAVQPQLPKMVTLLNFDPSFKLTELQARTLIVLKNQGGE 243 >UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacteria RepID=B6JD02_OLICO Length = 805 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 242/736 (32%), Positives = 360/736 (48%), Gaps = 27/736 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL-NEL 60 V V +PV L +T+ Y +PEG+ + G V VP + E +V + + + L N L Sbjct: 85 RVVDVLVPVALDQTYSYSVPEGLDLTVGDVVTVPLAAR-EVTAVVWAENPNPDPRLHNRL 143 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + LD P + R + W + Y G V L + G + Sbjct: 144 KDISGKLD-VPPLREELRRFVDWVSTYTLASRGMVARMTLRMGEHLGPERVRLGVRL--- 199 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQG--KIWRDQVATLEFNDAALQALRKKGLCDLAS 178 V + + + + L L G + + + + ++ L +G + Sbjct: 200 ------VGAPPARMTAARARVLDLLSDGLLRPKSEAAKEAGVSVSVIEGLVDEGTLTVEP 253 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLS 236 E + A + + EQ+ A +H+ D F+ LL GVTGSGKTEVY Sbjct: 254 MPREKPMQPPDPAFAEPDF--SPEQSAAAAEMHALAQKDDFAVALLDGVTGSGKTEVYFE 311 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + ++ +G+QAL+++PEI LT Q + RF +RF HS L R WL NGE Sbjct: 312 AVAEIIRKGRQALILMPEIALTGQFLDRFSQRFGVRPIEWHSELTPRTRARNWLAVANGE 371 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+G RSALF P+ +LG+IV+DEEHD +YKQ +G YHARD+AV R H +IP++L S Sbjct: 372 AQIVVGARSALFLPYADLGLIVVDEEHDQAYKQSDGAHYHARDMAVVRGHIAKIPVVLSS 431 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQH 414 ATP++ET N + +Y + L R G +DL+ + G ++P L ++ Sbjct: 432 ATPSVETEVNARTGRYTRIALPSRFGGQHMPQIEAIDLRREGPPRGRFISPPLAEAVKFA 491 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 ++ Q +LFLNRRG+AP LC CG C CD + H+ + L CHHC P P Sbjct: 492 VERREQALLFLNRRGYAPLTLCRACGHRFSCNICDAWLVDHRFRQRLVCHHCGFSMPRPH 551 Query: 475 QCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 QCP CG+ L +G G E+L++ +A LFP + D + + +L E+ G Sbjct: 552 QCPQCGAEESLAAIGPGVERLQEEVANLFPEARTMVLSSDLITDIETMRSELNEIAEGRV 611 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 I+IGTQ++AKGH+FP + LV ++D D L + D R+AER QL QV GRAGR +G Sbjct: 612 DIIIGTQLVAKGHNFPRLNLVGVVDADLGLGNGDPRAAERTFQLLNQVIGRAGREQGRGV 671 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 LQTH PEHP+++ L+ AF + + R PP+ + N A F Sbjct: 672 GYLQTHQPEHPVMKALVASDRKAFYDSEIEARERAAYPPFGRLAALIIAAANRPDAEGFA 731 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 ++L L +E++ VLGP A GR R++IL++ L + LA Sbjct: 732 RKLVGLAPR----EERVIVLGPAEAPLAVIKGRHRFRILVKSQRVFDLSGYLRTWLAAAP 787 Query: 714 TIPDSRKVKWVLDVDP 729 S + +D+DP Sbjct: 788 KTKGS--LTLEVDIDP 801 >UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GMK1_9FUSO Length = 734 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 211/729 (28%), Positives = 365/729 (50%), Gaps = 26/729 (3%) Query: 16 FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVF-- 73 + Y + + G V F + + + +V+S +EL ++ K + + D PV Sbjct: 15 YTYKSQDKY--EIGEWCIVNFANRNK-MALVLSEISETELTIDTAK-IKFISDKAPVLSV 70 Query: 74 THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLK 133 + L+ W DYY V+ A P L+ + E+ + + Sbjct: 71 PSVIMELVKWIKDYYLSDYNSVIKAAYPGALKLNYSKKAVYVKDLEIKEKKEKLFEKEES 130 Query: 134 -RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAV 192 +S ++ +++ K Q F++ + ++ + + S + N + Sbjct: 131 GKSESIEKFNEYMKKKKEVTFQTLQKNFSEKIINKAIREKAVTIEKKIITKSKIKENTEL 190 Query: 193 SGERLR----LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQA 248 E L+ LN EQ AV I + + F +L+ GVTGSGKTE+Y+++++N + + + Sbjct: 191 KSEILKDSVVLNDEQQKAVNRIENGNNKF--YLIKGVTGSGKTEIYVNLIKNAMKENCGS 248 Query: 249 LVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALF 308 + +VPEI LTPQ I R +F+ V VLHS L D E+ + W + GE IVIG RSA+F Sbjct: 249 IFLVPEISLTPQMIERLERQFSGSVAVLHSKLTDVEKRAEWSFIRRGEKKIVIGARSAIF 308 Query: 309 TPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH-SEQIPIILGSATPALETLCNV 367 P +NL I+IDEEH+++YKQ RYH ++ A+ RA E + +I GSATP+ E+ Sbjct: 309 APVENLKYIIIDEEHENTYKQDTNPRYHVKNAAIKRALIEENVKVIFGSATPSFESYYQA 368 Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNR 427 ++ L+ L R NA+ V+DL + L+ + L QV+L LNR Sbjct: 369 KKGDLELIELKERFNNAKIPEYKVVDLNETP--NNFSDELLKEISNTLAKKEQVLLVLNR 426 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPV 487 + F+ L C +CG I CP C + ++ + L+C +C + ++C SCGS ++ + Sbjct: 427 KAFSNLLKCKECGNIPTCPNCSISLSYYKYDNKLKCSYCGYEERFDKKCKSCGSDKMIQI 486 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 G GTE++E+ L +F I RID ++ K E + I++GTQ++AKG H Sbjct: 487 GSGTEKIEEELKEIFYDGKIVRIDSESVKTKKDYENLYNDFKNQKYNIMLGTQIIAKGFH 546 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQ 607 FP+VTLV +++ D L DFR+AE+ QL Q AGRAGR K+G+V++QT + E+ +++ Sbjct: 547 FPNVTLVGIVNSDIILNFPDFRAAEKTFQLLVQSAGRAGREEKEGQVIIQTFNKENEVIK 606 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN----NQHAPLFLQQLRNLILSS 663 + Y+ + E+ + R+++ PP+ +I+ + +F ++ + + Sbjct: 607 KTVENDYEGYFEKEMEIRKLLNYPPYGRLIIIVLSSDEENGLEEKVKIFYNKIMSSVKRK 666 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR--VRLQHIINGTLALINTIPDSRKV 721 ++ ++ P A K R+R+QI ++ ++++II TL N + + Sbjct: 667 IQPEKNEFISEPFKAPIYKINTRYRYQIFIKFNRNNITKIKNIIRATLNDYNE----KNM 722 Query: 722 KWVLDVDPI 730 + +DVDP+ Sbjct: 723 RISVDVDPV 731 >UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRR8_DESOH Length = 679 Score = 668 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 229/557 (41%), Positives = 314/557 (56%), Gaps = 10/557 (1%) Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD-TFSAWLLAGVTGSGKTEVYLSVLENV 241 D + + L T+Q V + S D F + LLAG+TGSGKTEVY+ V+ Sbjct: 119 PKDAVGDPILPDTPPDLTTDQEAVVADLVSRLDAGFCSCLLAGITGSGKTEVYMRVVAAA 178 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 LA GK ALV+VPEI L Q RF RF V VLHSGL+ +ER W K GEAAI I Sbjct: 179 LAMGKTALVLVPEIALIAQAEHRFCARFGHTVAVLHSGLSRTERWHQWSKIARGEAAIAI 238 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P G+I++DEEHD+SYKQ+ G RY+A DLAV RA ++LGSATP++ Sbjct: 239 GTRSAVFAPLDRPGIIIVDEEHDTSYKQESGLRYNACDLAVVRAKLSDAVVVLGSATPSV 298 Query: 362 ETLCNVQQKKY-RLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQ 416 ++L N K+ + R+ RR V+DL+ Q+ + G ++ L M + L Sbjct: 299 QSLHNATTGKFSKTYRMDRRINRQPLPAITVVDLREQQARRGPRAYISDELHRAMAETLA 358 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 NQV+LFLNRRGFA +C CG +C CD TLH+ + RCH C R R C Sbjct: 359 QGNQVLLFLNRRGFASLPVCAACGNTIKCKHCDISLTLHKGANAFRCHFCGYSRAAARGC 418 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 CGS+ + +GLGTE++E+ + LFP ++R+DRDTT+RKGA+ + L ++ IL Sbjct: 419 DICGSSSIKLLGLGTEKVEEAVKQLFPEASVARLDRDTTTRKGAMLRILKDLKNRKIDIL 478 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKGH FP +TL+ ++ D +L DFR+ ER QL QVAGRAGR G V+L Sbjct: 479 VGTQMIAKGHDFPGITLIGVICADLSLNFPDFRAGERTFQLLAQVAGRAGRGVDPGRVIL 538 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ- 655 QT++P+H + + AF +Q +A RR + PP++ V + + A ++ Sbjct: 539 QTYNPDHLCIAAATRQDGSAFYDQEIAFRRQLGYPPFSRMVHLHISATDPAKAKARAREA 598 Query: 656 ---LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 L S+P + VLGPV A K R+RWQILL+ S ++ LA Sbjct: 599 GDCCTALKNSAPAVFGAVEVLGPVEAPIHKLASRYRWQILLKSRSAAAVKSFAARLLAQD 658 Query: 713 NTIPDSRKVKWVLDVDP 729 V+ V+DVDP Sbjct: 659 GQRLRKGGVRLVVDVDP 675 >UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PKC0_9SPHI Length = 825 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 204/639 (31%), Positives = 328/639 (51%), Gaps = 21/639 (3%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL------E 159 + + + + +G+ L+SL R+PKQQ A+ A Q ++ Sbjct: 192 KPKKKNYLILNAEYTDTEGKRELLDSLNRAPKQQDAVLAYLQLSKTSSEITRQAIMEAVG 251 Query: 160 FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA 219 A++ AL KG+ + + S + N Q A I+ Sbjct: 252 CGPASITALIDKGVFLVKEKVV--SRFEGEDIELTASFTFNEGQQEAFDQINKLFHNKDV 309 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 LL GVT SGKT++Y+ ++E +A+GK AL ++PEI LT Q R + F + V HS Sbjct: 310 VLLHGVTASGKTQIYIRMIEQAIAEGKSALYLLPEIALTAQITERLKLYFGDQLGVYHSK 369 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHAR 338 ND+ER W K E +VIG RS+LF PF LG+++IDEEH+SSYKQ + RYHAR Sbjct: 370 FNDNERAEVWHKVLKNEYKVVIGARSSLFLPFHELGIVIIDEEHESSYKQYDPAPRYHAR 429 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 D A+Y + Q I+LGSATP++E+ N + KY L++L +R G A+ ++++ +K Sbjct: 430 DTAIYLGYIHQAKILLGSATPSIESYYNAKAGKYGLVQLLKRYGTAQLPEIKIVNISEEK 489 Query: 399 VQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 + + L+ + + + QVILF NRRG P + C+ CG++A+C CD T Sbjct: 490 RKDNMHSYFSGILLKEIAETIARKEQVILFQNRRGHTPIIQCNTCGYVAKCVNCDVSLTY 549 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ + + CH+C P+ CP+CG+TH+ G GTE++E+ L L P I R+D D+ Sbjct: 550 HKTTNRMHCHYCGHHEAPPQICPACGTTHMESRGFGTERIEEELELLMPDARIGRLDLDS 609 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T K ++ + ILIGTQM+AKG F V+L+ +++ D + DFR+ ER Sbjct: 610 TKGKHGFDKIITAFDEHEYDILIGTQMIAKGLDFGKVSLIGIINADTIINFPDFRAYERA 669 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 L++QV+GRAGR G+V++QT+ P H +++ ++ YDA + ER+ Q PP+ Sbjct: 670 FSLFSQVSGRAGRRDSVGKVIIQTYTPNHRVIEQVVAHDYDAMFLEEATERKNYQYPPFY 729 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + + + Q + L + + S+ + V+GP P L + + I L+ Sbjct: 730 RLIKIDVKHPDIQKCFDAARDLASGLRSTLGS----RVIGPEPPLVSRVRNYFIQTITLK 785 Query: 695 HP----SRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 S +++ ++ + V+ +DVDP Sbjct: 786 IERNNVSIAKVKELMQQAILSFELDKSHTGVRIQIDVDP 824 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 17/226 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +V LP+ + +T+ Y +P + + G RV V FGK + IV V++ + E Sbjct: 14 FVNVILPLAISKTYTYRIPHEWSDKIAVGMRVIVQFGKNKIYSAIVKEVTEMAP-ERYEA 72 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V+++LD +P+ + +L W A YY +G+V+ Q A + Sbjct: 73 KYVLDILDQQPIVDGAQLKLWEWMASYYMCTLGEVM---------QAALPAALKLASETK 123 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA----LQALRKKGLCDL 176 L+ + S K+ + AL R L+ L G + Sbjct: 124 IIASDQEGLDKSQLSDKEYMIMEALEIAGELRVSDIVKLLGQKTVFPILKQLFDNGFLMI 183 Query: 177 ASETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 + E E + + NY + + + +++ A A L Sbjct: 184 SEEISERYKPKKKNYLILNAEYTDTEGKRELLDSLNRAPKQQDAVL 229 >UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales RepID=C8X3K7_DESRD Length = 778 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 242/777 (31%), Positives = 375/777 (48%), Gaps = 58/777 (7%) Query: 5 HVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VAL T Y LPEG + G RV VP G + R G+++ + +S L ++LK Sbjct: 6 DVALLGAPFTTLTYTLPEGFPHSLWQPGLRVWVPVG-RALRPGVLLRPASSS-LDPDKLK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA---------- 111 + L+ P+ + ++ A G +L ALP LR + A Sbjct: 64 PLFWPLERAPLLSRDYLEMIEEMAKRVVQDSGAILAAALPAGLRSAKGALVAAGNKRERL 123 Query: 112 --------------------NAPMWYWFATEQGQAVDLNSLKR----------SPKQQQA 141 + W + L + + +Q Sbjct: 124 SLDALRRLSETERKRWAELWSEGQAEWVLHDSEHRDSLQCFVKQDPPWQVRPQAKRQIAV 183 Query: 142 LAALRQGKIWRDQVATLEFND---AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLR 198 L L E + L L K L ++A+ E + A E L Sbjct: 184 LDYLWDKGSVNRGRLRHELGNWAGPVLDTLCDKALVEVAA-PEECEPDSCSVASGLEDLV 242 Query: 199 LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 L+ EQ+ A+ + AA A L+ GVTGSGKT VY + LA G+ L++VPE+ L Sbjct: 243 LSAEQSRALEGLRHAATQHQAALVHGVTGSGKTVVYAHLAREWLAGGRSVLLLVPEVALA 302 Query: 259 PQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAK-NGEAAIVIGTRSALFTPFKNLGV 316 QT+A R V + H + +R + + E +V+GTRSALF P ++ G+ Sbjct: 303 RQTLAAVRHFLPGERVYLYHGYQSPKQREKVFTELAGRDEPCVVVGTRSALFLPLRDTGL 362 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 +V+DEEH S+KQ E Y A++LA +R Q ++LGSATP L+T ++++ + Sbjct: 363 VVLDEEHAESFKQDERLVYQAKELAFFRVRQSQGFLVLGSATPDLKTFSAAREERLPKVT 422 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 L R G ++ ++DL+ + AG A ++ R+++ L+ Q I+ NRRG+AP + Sbjct: 423 LQERVGASQLPEIDLVDLREEPPVAGPFAASVHQRLQEVLERGEQAIIMHNRRGYAPLVY 482 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C CG +A CP C+ T H+ + L CH+C + P CP C ++ VP+G GTE +E Sbjct: 483 CTGCGEVARCPDCEVGLTYHKRRQRLVCHYCGQHKEFPFVCPKCRASQFVPIGEGTELIE 542 Query: 496 QTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + L+ P GV + R+DRD+T R+G LE+ LA RG +++L+GTQML+KGHHFP VTL Sbjct: 543 EYLSTSLPAGVRVDRLDRDSTRRQGRLEEILAAFSRGESQVLVGTQMLSKGHHFPGVTLA 602 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 ++D D L D+R+AER Q+ QVAGRAGR K G V++QT PEH + + Y Sbjct: 603 VVVDGDLGLNLPDYRAAERTFQMLVQVAGRAGRGDKPGHVLIQTRDPEHYCWEFVRRGDY 662 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAEDHNN-QHAPLFLQQLRNLILSSPLADEKLWVL 673 + F E+ A R+ + PP+T +VR + ++++ + + A L VL Sbjct: 663 EGFFEREAALRQRLSYPPYTKLALVRFSLPTEWEQGAETIREVGRFLRQAGKA-AGLRVL 721 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 GP PA + GR R+ LL+ S ++ + + R+++ LD+DP+ Sbjct: 722 GPAPAPLGQLRGRLRYHCLLKGESWQEMRTVYQQVRHRFFRV---RQLRIQLDLDPV 775 >UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NKU6_9DELT Length = 820 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 230/642 (35%), Positives = 317/642 (49%), Gaps = 14/642 (2%) Query: 100 LPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE 159 L + R SLK S + AL G + V E Sbjct: 177 LQLGHRLRAEKVRPKTETVVIPRGQARQHQPSLKPSEAKTLALLGELAGAEEQPAVPRRE 236 Query: 160 FND------AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA 213 AL+ L GL L +L TEQ + AI A Sbjct: 237 LTRQYPGAGRALKGLAAHGLVALEQRRLFRDPLGEPPPFFARPAQLTTEQQAVLAAIQPA 296 Query: 214 A--DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA 271 ++ +LL GVTGSGKTEVYL LAQG+Q LV+VPEI L Q F RF Sbjct: 297 VTGGRYAPFLLHGVTGSGKTEVYLQAAATALAQGRQVLVLVPEIALATQLEGHFCSRFGD 356 Query: 272 PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE 331 V +LHSGL R W +G+A I IG RSA+F P + G+I++DEEHD +YKQ++ Sbjct: 357 IVALLHSGLAAGARFDQWSLLLSGQAKIAIGARSAIFAPLPDPGLIIVDEEHDPAYKQED 416 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 RY+ARDLA+ R +Q +ILGSATPA+ + Q K++LL +++R + + Sbjct: 417 QPRYNARDLALLRGLQQQATVILGSATPAVASFYQAQAGKFKLLTMSKRVEDRPLPAVEI 476 Query: 392 LDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 +DL+ K +G +P L+ ++++L A Q ++FLNRRGFA +LC DCG +C Sbjct: 477 IDLQEVKTVSGRPPLFSPQLVKALKENLAAGRQSLVFLNRRGFANLMLCKDCGRPIQCQH 536 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 C TLH+ + L CHHC P CP C S LV G GTE+LE+ L+ L P I Sbjct: 537 CQVSLTLHKKRGQLLCHHCGFHLPRNVVCPHCRSGTLVAAGFGTERLEEELSRLLPSARI 596 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 +R+D+DT+ + L V ILIGTQM+ KGHHFP VTLV ++ D L D Sbjct: 597 ARLDQDTSRDRRRYLAVLKAVRDHEIDILIGTQMITKGHHFPQVTLVGIVWADAGLGIPD 656 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 +++AER QL TQV+GRAGR G V++QT +H + Y ++ +A RR Sbjct: 657 YKAAERTFQLLTQVSGRAGRGEHPGRVIVQTLQADHYSVALAQAHDYQGLYQREIALRRR 716 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 + PP+ + +R + N Q L + A + VLGP PA + GR+ Sbjct: 717 LGFPPFGRLINLRLDGENEQRCQELAAGLGEIARRQQPA--TVQVLGPAPAPLARLRGRY 774 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 RWQ+LL+ + + G A + + VK LDVDP Sbjct: 775 RWQLLLKGAEVATIHTLCRGICAEFAKLAGASTVKLSLDVDP 816 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 2/111 (1%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 P VA+ P+ Y P + + G R+ VP GK+Q G +++ S + ++ Sbjct: 10 PYLEVAVCAPIEHPLTYTPPPEAGILQPGQRLLVPLGKRQ-ITGYLLACQQQSPVAGAKI 68 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 + + VLD EP+F ++ W ADYYHHPIG+++ ALP L + Sbjct: 69 RPALAVLDPEPLFPAAMIPFFRWLADYYHHPIGEIIQSALPAGLDRRSVPV 119 >UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Possible helicase) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RW4_CYTH3 Length = 815 Score = 663 bits (1711), Expect = 0.0, Method: Composition-based stats. Identities = 209/642 (32%), Positives = 323/642 (50%), Gaps = 26/642 (4%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG------------KIWRDQV 155 + + + + T A + L + P+QQ+ L Q I + Sbjct: 177 KIISKIRLADQYTTPHALANLMQELDKKPRQQEVLMRYLQEVPVIQTPGANIPGIEKTFF 236 Query: 156 ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD 215 + ++LQ L K + + E +R + + L+ +Q A +I D Sbjct: 237 TASGLSTSSLQTLIKNKVFEAFEEVISRLSYRADE--KKSVVELSEQQEAAKESILLQLD 294 Query: 216 TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 T + LL GVTGSGKTE+Y+ +++ + G QAL+++PEI LT Q + R E F + V Sbjct: 295 TKDSVLLHGVTGSGKTEIYIDLIKRSIDNGSQALLLLPEIALTTQIVQRLEEYFGDRMGV 354 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWR 334 HS +D+ER+ W + G ++G RS++F PF +LG+I+IDEEH++SYKQQ+ R Sbjct: 355 YHSKFSDNERVEVWRGLQEGRYDFIVGVRSSVFLPFTHLGLIIIDEEHEASYKQQDPAPR 414 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL 394 Y+ RD A+ A +LGSATP++E+ + ++ + L R GN + D+ Sbjct: 415 YNGRDAALMLARIHNAKTVLGSATPSIESRDAALKNRWGYVPLLNRYGNVSLPEIRLADM 474 Query: 395 KGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 + ++ VQ G + L++ +R+ + QVI+F NRRG+AP L C DCG I C C Sbjct: 475 RVERKNKTVQQGFSLTLLSAIRETIANKKQVIIFQNRRGYAPMLECEDCGNIPMCTSCSV 534 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 T HQ H LRCH+C R VP++C SC S L VG GTE++E L L P I R+ Sbjct: 535 SLTYHQFSHELRCHYCGFTRKVPQKCDSCSSHRLKTVGSGTERIEDELQILLPEARIRRM 594 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DTT +K + + + + ILIGTQM+ KG F +V LV + D D L+ DFR+ Sbjct: 595 DLDTTRKKNSFAELITAFSQHEIDILIGTQMVTKGLDFANVELVGVYDADRMLYFPDFRA 654 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 ER Q+ QV+GRAGR +G+V++QT PEHP+ + YD F + L ER M Sbjct: 655 IERTYQMIVQVSGRAGRKSGEGKVIIQTAQPEHPVFAFIKNNDYDGFFTRELYEREMYHY 714 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 PP+T + + + A L + + + +LGP A K + + Sbjct: 715 PPFTRVTHISVLHLDKKEALKTAHGLTAKLKDAIGSK---RILGPQVASIEKLRNYYHIE 771 Query: 691 ILLQ-HPSRVRLQHIINGTLALIN---TIPDSRKVKWVLDVD 728 + ++ LQ I N +++ T+ K + ++D D Sbjct: 772 LFIKLEKDIKGLQSIKNKIASIVQNEHTLHIGSKGRIIIDTD 813 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 9/178 (5%) Query: 7 ALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 LP+PLP+ F Y +P+ + TV AGCR+ VPFG+++ G+V S+ + + K ++ Sbjct: 2 VLPLPLPQLFTYKIPDQLVDTVSAGCRIIVPFGQRKFVTGVVRSIHQHAP-ASYQTKELI 60 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 +VLD P ++ + W A+YY G+VL ALP + ++ M Q Sbjct: 61 DVLDVTPTMNAYQFKFMDWMAEYYLCAPGEVLQAALPSGFKL----SSESMIQLNPLFQE 116 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 +VDL +R Q+ L I ++ ++ L +K L E E Sbjct: 117 ASVDLTEKERRIIQELRSNTLSYKDI--SKLIDQSSVQPIIKLLIQKQAILLFEEVKE 172 >UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PM74_CHIPD Length = 815 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 241/824 (29%), Positives = 370/824 (44%), Gaps = 107/824 (12%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+ LP+ + Y +P M +KAG RV V GKQ++ GIV ++ + + Sbjct: 1 MKFADVILPLALPKNYTYAVPPHMEESLKAGSRVAVQLGKQKKYAGIVKAIHEQAPAD-Y 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K ++++LD +PV + W A YY G+VL ALP L+ + Sbjct: 60 RTKPLLDMLDKDPVVYPTQLSFWQWLASYYMCTEGEVLNAALPAHLKLSSETLLLFNDAY 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN-DAALQALRKKGLCDLA 177 D + +AL ++ +I Q+ + + + ++ L +K + + Sbjct: 120 GDDFSNLDDDEYLV------AEALNIRKELRIDEVQLILDKADVYSTIKKLIEKNVLLVY 173 Query: 178 SETPE---------------------FSDWRTNYAVSGERLRLNTE-------QATAVGA 209 E E + A + +++ L Q + + + Sbjct: 174 EELKEVYKEKKENYVQLHTQYEDEELLAPLFNELAKAPKQMELLLAYLHLIKTQGSVLQS 233 Query: 210 IHSAADTFSAWLLAG----------------VTGSGKTEVYLS-----VLENVLA----- 243 + L G V G GK E + E LA Sbjct: 234 ELLKKSGATTAQLKGLVDKNILWIEKRVVDRVPGGGKVEAQIDFKLSPAQEKALAEVRNS 293 Query: 244 --------------QGKQALVM----------------VPEIGLTPQTIARFRERFNAPV 273 GK L + +PEI LT Q + R ++ F + Sbjct: 294 FAAKPVTLLHGVTSSGKTQLYVKLIEEYVAMGKQVLYLLPEIALTAQIVRRLQKHFGNKI 353 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-G 332 + HS N++ER+ W K KNG+ I++G RS+L PF++LG+I++DEEHD SYKQQ+ Sbjct: 354 GIYHSRFNNNERVEIWNKVKNGDLKILLGARSSLLLPFQDLGLIILDEEHDPSYKQQDPA 413 Query: 333 WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL 392 RYHARD A+Y A + ++LGSATP+LE+ N QQ KY L+ L+ R G ++ Sbjct: 414 PRYHARDAAIYYAGLFRAKVLLGSATPSLESYFNAQQGKYGLVELSERFGGLEMPEIAIV 473 Query: 393 DLKGQK----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRC 448 D+K ++ +Q P L + + A NQVILF NRRG+AP L+C CGWI C C Sbjct: 474 DVKKERAEKSMQENFTPQLNAAINNSVAAGNQVILFQNRRGYAPFLMCATCGWIPSCKNC 533 Query: 449 DHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 D T H+ Q L CH+C ++ P P+ C +CGS L P GTE++E L LFP I+ Sbjct: 534 DVSLTYHKNQDKLHCHYCGTRYPYPQTCAACGSQTLNPKSFGTEKIEDDLQQLFPKARIA 593 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 R+D D K + + + + + IL+GTQM+ KG F +V LV +L D L DF Sbjct: 594 RMDMDAVRNKDSHNKMIQLLEQRDIDILVGTQMVVKGLDFDNVNLVGILSADSLLSFPDF 653 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 R ER QL QV+GRAGR +G+V++Q + HP+L + Y A +AER Sbjct: 654 RVNERAFQLMEQVSGRAGRKHGKGKVIIQASNTRHPVLSYVTTHDYKAMYVAEIAERENF 713 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 PP+T + + + N Q Q L N + ++GP L + + Sbjct: 714 SYPPFTRLLKITLKHKNQQTVEQAAQVLGNWLR----PHIGARLVGPAIPLVGRVRNNYL 769 Query: 689 WQILLQHPSRVRL----QHIINGTLALINTIPDSRKVKWVLDVD 728 ++L++ P ++ + ++ + R V V DVD Sbjct: 770 QEMLIKLPRDSKVIADTKRMVQEHFIRLLAEKQFRSVFIVPDVD 813 >UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTT2_DESAD Length = 780 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 225/781 (28%), Positives = 367/781 (46%), Gaps = 66/781 (8%) Query: 7 ALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 L P + Y P + + G RV VP G+ R+ ++ + ELK+++ Sbjct: 8 CLASPPYSIYTYEAPADLPKLMEGQRVLVPLGRS-VRVAFLIETVETPP-EGVELKSIIW 65 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ------------------- 106 L+ +P+ + ++L P+G VL + +P R Sbjct: 66 PLERDPLLNSNHFKLYRNIGARQMQPLGKVLENVVPKRFRSAKVSFKVADRALPARLKAL 125 Query: 107 --GRPAANAPMWYWFATEQGQ-------------------AVDLNSLKRSPKQQQALAAL 145 GR A M ++G+ + +Q Q L + Sbjct: 126 DIGRMPAEKRMELVKIYDEGRMNVSLPAAIEKEEYVSLTSDPPWPVRPNAARQLQILEFI 185 Query: 146 RQGKIWRD---QVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNT- 201 + + ++ ++ L L + E + A +G + Sbjct: 186 FENGPREKGFLKNIMGDWTTGVIKKLHSDSLVKIGPPPEEERNPAEKCAATGPKWDFTPS 245 Query: 202 -EQATAVGAIHSAADTFSAW--LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 +Q A+ + +A D + LL G+TGSGKT VY++ L QGK +V+VPEI L Sbjct: 246 EQQQGAIDELLAALDEPKSTVKLLHGITGSGKTLVYMTAARKCLEQGKSVIVLVPEIALA 305 Query: 259 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA--KNGEAAIVIGTRSALFTPFKNLGV 316 F + L+ G R A +A ++ A+++GTRSALF P +N G+ Sbjct: 306 YALWNGICPLFPDARKYLYHGYQTPVRKEAIFRALAEDDSPALIVGTRSALFLPVRNPGL 365 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYKQ+E Y A+++A AH ++LGSATP ++T QQ + ++ Sbjct: 366 IIVDEEHDESYKQEERLPYQAKEVAYVLAHMTGSLLVLGSATPDIKTFHAAQQGAFEVIS 425 Query: 377 LTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 + +R G + V+D + + AP R+++ + Q ++ LNRRGF+P + Sbjct: 426 MEKRVGKSMLPAVKVVDTSAIKNPEQPFAPETEARLKEVVAKGEQAVVMLNRRGFSPLIY 485 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C DC +CP C+ T H+ + + CH+C + P C CG ++L+P+G GTE+LE Sbjct: 486 CTDCEEPFKCPHCNVSMTYHKGRERVICHYCGNAYHFPLPCSICGGSNLLPLGGGTERLE 545 Query: 496 QTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + +A P I R+DRD+T R+ L++ L RG A++L+GTQML+KGH+FP VTLV Sbjct: 546 EQVAKALPPETKILRMDRDSTRRQERLDEILKSFARGDAQVLVGTQMLSKGHNFPGVTLV 605 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 + + D L D+RSAER QL QV+GRAGR K GEV++QT +P++P+ + Y Sbjct: 606 VVSEGDLGLNLPDYRSAERTFQLLVQVSGRAGRGEKPGEVIIQTRNPQNPIWGAVTSADY 665 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAED----HNNQHAPLFLQQLRNLILSSPLADEKL 670 F E+ + +RR + PP+T ++R P F Q+R S + Sbjct: 666 KTFFEKEIEKRRRFRYPPFTKLTLIRISHPMGWEGEHLCPPFFSQIREAAKES-----GI 720 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +GPVPA + GR R+ LL+ ++ + + L PD ++++ +D+DP+ Sbjct: 721 MAMGPVPAPLAQLRGRKRFNCLLKSDDWMKTRELYAQIL---RRNPDKKQIRITMDLDPV 777 Query: 731 E 731 Sbjct: 778 N 778 >UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYL3_9PROT Length = 705 Score = 660 bits (1704), Expect = 0.0, Method: Composition-based stats. Identities = 262/733 (35%), Positives = 364/733 (49%), Gaps = 32/733 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M VA+ PLP F Y P G RV+VPFGK RIG+V+ +SD E Sbjct: 1 MLCIEVAVFSPLPGCFSYSWPPEFGEPAVGIRVQVPFGKG-TRIGVVLRLSDTLP-DSVE 58 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V + LD P++ S + + YY GD AL A P Sbjct: 59 LKPVADRLDVSPLYDASRIQWVERVRRYYLASSGDAWQTALAWAAHDQVRAFRCPDVAVL 118 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 A + + +R+ + A + + L + GL + Sbjct: 119 AKAAPALAAVFTSRRALSLKTIAARIEPCALRH-----------CLNTACQAGLLEEVLH 167 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 P + A L L QA+AV + A F +LL G TGSGKTEVYL Sbjct: 168 EPLLQQNESIPAA----LTLTDAQASAVQMLVDARG-FQPFLLFGRTGSGKTEVYLRAAS 222 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 + +G + LV+VPEIGLTP IAR + RF A V V HS L + +RL+ + I Sbjct: 223 ESIRRGGRVLVLVPEIGLTPMWIARLQSRF-ARVAVWHSALTERDRLAVRQHLA--QTDI 279 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 +IGTRSALF P +L +IV+DEEHD S+KQQ+G Y ARD+AV A IPI+LGSATP Sbjct: 280 LIGTRSALFLPLPDLAMIVVDEEHDGSFKQQDGMAYSARDMAVLLAQQLDIPIVLGSATP 339 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQ-HVLDLKGQKVQAGLAPALITRMRQHLQAD 418 +LE+ Y+ + L R + I+ ++D++ V ++PAL+ M+Q L A Sbjct: 340 SLESWRQALAGLYQRIDLPSRIADHTQQIKPEIIDMRA--VDGPVSPALLAAMQQTLAAG 397 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 +Q ILFLNRRG++P+L C CG + +CP C TLH+ LRCH C R PR C Sbjct: 398 DQTILFLNRRGYSPSLQCTACGDVPQCPACSLSLTLHRRAGQLRCHSCGFIRRAPRSCEC 457 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG L+P+G GTE++E+ L P + SR DRD + L + LA R L+G Sbjct: 458 CGEAALMPMGEGTERIEEWLQQHIPDLRFSRFDRDVVTSHARLSEILAAFERRELDCLLG 517 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQML KGH FP VTLV +++ D + DFR+ ER+ Q TQV GRAGR K G +++QT Sbjct: 518 TQMLVKGHDFPHVTLVGVVNADQGMNMPDFRAGERWWQQMTQVTGRAGRGEKAGRMLIQT 577 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+ LQ + +A L R M+Q PP+ V V + A Sbjct: 578 RMPDAAWLQRIAEAQAEATMTAELELREMLQYPPFARWVRVVFSAMRAERADQAAAAFAE 637 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 S A +L V GP+P + GR+R+++LL+ +R L L +++++ Sbjct: 638 ----SCRAISELMVSGPMPCAMERLAGRFRFEVLLRDTTRQLLP---WKLLPVLDSLKVP 690 Query: 719 RKVKWVLDVDPIE 731 V+ +DVDP + Sbjct: 691 SGVRRRVDVDPQD 703 >UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEQ5_KOSOT Length = 759 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 218/758 (28%), Positives = 366/758 (48%), Gaps = 70/758 (9%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 PL TF Y + G RV V F + + VV ++D ELP K V++ LD + Sbjct: 7 PLLDTFTY--HTDFPLTPGERVVVDFANRSV-VAYVVEITD--ELPEFATKPVLQKLDEK 61 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA-------------------- 110 P T L L ++ + P+G + P + Sbjct: 62 PFLTSKDVELALRISERFLCPVGKIFDLFFPPGKVMNVKSFVVPQSQELPIKDIIPLTAA 121 Query: 111 ----ANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA-- 164 + W + + + V K++ Q++ LR +++ + Sbjct: 122 REKFGAVTIENWKKSRKIRIVHSYEQKKTRVQKKKFVRLRLSIKDLEKIKLTDLQRKVVE 181 Query: 165 ------------------------LQALRKKGLCDL-ASETPEFSDWRTNYAVSGERLRL 199 +Q L KKG+ ++ ET EFSDW L Sbjct: 182 HLFSFDVIEVRELIKNLDLKSISPIQTLEKKGILEVFEDETYEFSDWTIAPID-----EL 236 Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 +EQ + +I D L+ G+TG+GKTEVY +E VL +G Q L +VPE+ LTP Sbjct: 237 TSEQRRVLNSIV--YDFKGVHLIYGLTGTGKTEVYFKAMEKVLTEGAQVLYLVPEVSLTP 294 Query: 260 QTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 Q +AR + F V V HS L+ ++R WL A G I+IGTRS+++ P + LG+I+ Sbjct: 295 QLLARVKGTFPGREVRVYHSYLSKAKRQGIWLDAHEGNVDIIIGTRSSIWIPMRKLGLII 354 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLT 378 +DEEHD+S+ QQ Y A ++AV + IPIILGSATP + + +Y+L +L Sbjct: 355 VDEEHDASFYQQSSPHYDAVEVAVEKGKLHNIPIILGSATPRVTHYFRAIEGEYKLHKLK 414 Query: 379 RRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHD 438 R P+++ ++D++ K L+ + +++ L+ + Q+ +F++R+GF+ ++C + Sbjct: 415 HRPVGKLPSLE-LIDMRKSKGFYVLSKKALEEIKELLKDEKQIFVFVHRKGFSNYVVCTN 473 Query: 439 CGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTL 498 CG + +CP CD T H+ + L+CH+C P CP+CGS L G GTE++E L Sbjct: 474 CGTVIKCPNCDISLTYHRHGNILKCHYCGFTTPPFSNCPNCGSAALSARGFGTERVEYEL 533 Query: 499 APLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 FP V I R+D++T E+ L + + A++++GT+M+AKG FP V V ++D Sbjct: 534 RNFFPSVKIIRLDKETIESPSDYEKALRMIEQEDAQVVVGTKMIAKGLDFPKVGCVIVVD 593 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D + + + E QL TQ +GR+GR G+ ++Q+ +P+HP++Q + ++ F Sbjct: 594 SDRLINLPRYDATENAFQLITQASGRSGRG-TFGKTLIQSFNPDHPVIQNAVENDFERFF 652 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPA 678 E + R +++ PP++ V + E + + +++ LI +++ + GPV Sbjct: 653 ETEIKTRELLKYPPFSYFVEMIVEHVDEKRCQKKAEEIAELI-GKEFSEQFFEIHGPVVP 711 Query: 679 LAPKRGGRWRWQILLQHP---SRVRLQHIINGTLALIN 713 + K GR+R +I L+ S L+ +I A I+ Sbjct: 712 VIKKFKGRFRMKIFLKLKPEASMKELRELIKKHSAQID 749 >UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacteria RepID=B5ZDR1_GLUDA Length = 759 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 255/747 (34%), Positives = 367/747 (49%), Gaps = 36/747 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVS-------- 50 P V LP+P P FDY P + G V VP G++ E G+V Sbjct: 28 PRVAVLLPLPFPGPFDYAAPPDLPAPPLQPGDIVTVPLGRRTE-TGVVWDPERNLPPEFT 86 Query: 51 --DASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 + LK V+ LD +P S+ R + W A Y P G VL AL R G Sbjct: 87 PPPMKSVADGRLKPVIARLD-QPPLPASLRRFVDWVAAYTLSPPGLVLAMAL----RTGT 141 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALA-ALRQGKIWRDQVAT-LEFNDAALQ 166 A AP W + L+ +P +++ L A G + ++A + ++ Sbjct: 142 AAQAAPALGWAVADPP-----PGLRDTPARRRVLDIAAHDGPLTAAELARRAGVGTSVVR 196 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVT 226 L G + TP + R + L ++ +A FS LL GVT Sbjct: 197 GLADAGALRGVTMTPRPAFVRPDPDHCPPALDGEQAESARALRALAAEGGFSVTLLEGVT 256 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTE+Y+ + LA+GKQ +V++PEI L+ Q RF RF A + HS L R Sbjct: 257 GSGKTEIYMEAIAACLARGKQVMVLLPEIALSSQWTGRFARRFGAEPALWHSDLGPRLRR 316 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W +G A +V+G RSALF PF LG+I++DEEH++++KQ++G YHARD+AV RA Sbjct: 317 VTWHAVADGTARVVVGARSALFLPFAELGLIIVDEEHETAFKQEDGVTYHARDMAVVRAR 376 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LA 404 ++ P++L SATP+LETL NV +YR L LT R G A +D++ + G L+ Sbjct: 377 MDRAPVVLVSATPSLETLANVGAGRYRHLVLTARHGGATMPEVRTIDMRAHPPERGLFLS 436 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 P L +RQ + Q +LFLNRRG+AP LC CG +CP C + H+A+ L CH Sbjct: 437 PVLTEAIRQAIGRGEQGMLFLNRRGYAPLTLCRTCGHRLQCPNCTAWLVEHRARQILTCH 496 Query: 465 HCDSQRPVPRQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HC Q P CP C + L P+G G E++ + FP I + DT A Sbjct: 497 HCGYQEATPPACPECHAESSLTPIGPGVERITEEARATFPDARILVMASDTLPGPAATAD 556 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 +A + R ++IGTQ++AKG HFP +TLV ++D D L D R+AER QL QVAG Sbjct: 557 AVARIARREIDLVIGTQIVAKGWHFPHLTLVGVVDADLGLGGGDLRAAERTVQLLHQVAG 616 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 RAGRA G V+LQ++ P+HP++ L+ +++F Q +RR PP+ + Sbjct: 617 RAGRAEAPGTVLLQSYTPDHPVMLALVSGDFESFMRQEAEQRRPGFWPPFGRLAALIVSA 676 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 + A + L + L VLGP PA GR R ++LL+ V +Q Sbjct: 677 DTPEAADATARALGQAAPR----GDSLQVLGPAPAPLAILRGRHRRRLLLRTRREVAVQP 732 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPI 730 ++ L + R + +D+DP+ Sbjct: 733 LLRQWLDRVT---PERGARIDIDIDPV 756 >UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=uncultured marine gamma proteobacterium EBAC31A08 RepID=Q9F7S3_PRB01 Length = 662 Score = 657 bits (1695), Expect = 0.0, Method: Composition-based stats. Identities = 243/733 (33%), Positives = 362/733 (49%), Gaps = 75/733 (10%) Query: 1 MPV--AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M + +A+ +PL + F Y + + G RV VPFGK++ +G+V+ + Sbjct: 1 MKIFYYDIAVSLPLRQCFTYS--SELKITKGTRVSVPFGKRK-IVGVVIKNIQK----PD 53 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + V P+ + + Y+ Sbjct: 54 FLKKAGAIKKIIAVLDE------------------------YPLFDKPIFDSILWSSDYY 89 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + + + ALR Sbjct: 90 HHPIGEVFNTFIPTELRKINNKKIEALR-------------------------------- 117 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 EFS++ N ++ L +Q AV A+ + FS LL GVTGSGKTEVYL V Sbjct: 118 ---EFSEYSVNED--DKKFDLTKDQEKAVKALSKSKG-FSPTLLYGVTGSGKTEVYLRVA 171 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 E + K LV+VPEI LTPQ ++RF RFN + + HS ++RL WLKAK G Sbjct: 172 ETFIKNNKSVLVLVPEINLTPQLLSRFENRFNGEIGIYHSKQTAAKRLKTWLKAKFGSIK 231 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I++GTRS+ P N+G+I+IDEEHD S++Q EG+++ ARDL++ RA IPIILGSAT Sbjct: 232 IIVGTRSSALVPLDNIGLIIIDEEHDQSFRQSEGFKFSARDLSIKRAQLADIPIILGSAT 291 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P+L+TL V++ K+ + + R +P LD+ + G+A I M+ + Sbjct: 292 PSLQTLKLVKENKFIRVDIPNRVDGNKPPKLIALDINNSPLIGGVAKETIEAMQSTIDRG 351 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 QV++F+NRRGFAP C CGW+A+C CD HQA++ L CH C+S V CP+ Sbjct: 352 EQVLVFINRRGFAPLYQCSSCGWVADCKSCDTNLVFHQARNRLICHRCESAYSVNLSCPA 411 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C S G GTE++E+ L F PI R+D D+T + GA+E + ++H A IL+G Sbjct: 412 CKSNDFNMYGAGTERVEEVLKSSFVKTPIIRVDHDSTKKVGAMEAIVKKIHSSDAAILVG 471 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGH FP VTL +L+ D L S + + E+ +QL QV+GRAGR +V++QT Sbjct: 472 TQMLAKGHDFPKVTLSVILNADNGLISPEINALEKISQLLIQVSGRAGRNNNLAKVIIQT 531 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 +P+ L + Y FA Q L+ M LPP+T+ ++R + FL++ Sbjct: 532 RYPDDINLNKIKTGDYMKFASQCLSTNEQMNLPPFTTLCLLRCSSPTQKSNVDFLEKAVL 591 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 ++ + + V+GP+P+L K G +R Q+ + P + L ++ P+S Sbjct: 592 ILSNR----TDINVIGPLPSLVSKSKGNYRHQVYIHAPKKTFLNKVLKFLTTEFEKWPES 647 Query: 719 RKVKWVLDVDPIE 731 KVKW D+DPI+ Sbjct: 648 NKVKWSFDIDPID 660 >UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepID=C3Q6Q1_9BACE Length = 820 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 214/691 (30%), Positives = 335/691 (48%), Gaps = 46/691 (6%) Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V+ V+ + + + Y + R A + Sbjct: 154 LKNVLTVI--KSLLDKEAIFVKEELKRNY-----------------KPRTEARVRLVNGE 194 Query: 120 ATEQGQAVDLNSLKRSPKQQQALA------------ALRQGKIWRDQVATLEFNDAALQA 167 A E N L R+PKQ L + ++ + + A Sbjct: 195 ADEAYLQRLFNELSRAPKQLMILMKYVELSGWVTKGYALKEVTKKELLEKSGGSVAVFNG 254 Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTG 227 L +K + ++ + E +G+ LN Q A I + LL GVT Sbjct: 255 LVEKKVFEVYHQ--EIGRLDKGILDTGDINPLNIAQQQAYSNILQCFREKNVCLLHGVTS 312 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTE+Y+ +++ VL GKQ L ++PEI LT Q R + F + + HS D+ER+ Sbjct: 313 SGKTEIYIHLIQEVLKTGKQVLYLLPEIALTTQITERLKRVFGHRLGIYHSKFPDAERVE 372 Query: 288 AWLK-AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRA 345 W K +++G RS++F PF+NLG+++IDEEH+++YKQQ+ RYHAR A+ A Sbjct: 373 IWQKQLGEKSYDVILGVRSSIFLPFRNLGLVIIDEEHENTYKQQDPAPRYHARSSAIMLA 432 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG----QKVQA 401 + ++LG+ATP +ET N KY L+ L R + R ++D+K +++Q Sbjct: 433 SMFKAKVLLGTATPGVETYFNATSGKYGLVELKERYKDIRLPHIELVDIKELAHQKRMQG 492 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 +P L+ ++++ L+ QVILF NRRGFAP + CH CGW+ +C CD T H+ + L Sbjct: 493 PFSPVLVKQIKEALERKEQVILFQNRRGFAPMIECHTCGWVPKCKNCDVSLTYHKGLNQL 552 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH+C VPR CP+CG L+ G GTE++E + +FP ++R+D DTT + A Sbjct: 553 TCHYCGYTYQVPRSCPACGGVELMHRGFGTERIEDDIKLIFPEAKVARMDLDTTRTRTAY 612 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ + G ILIGTQM++KG F V++V +L+ D L DFRS ER QL QV Sbjct: 613 EKIITNFELGKTDILIGTQMVSKGLDFDHVSVVGILNADTMLNFPDFRSYERAFQLMAQV 672 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGR KQG V+LQT P+ P++ +++ Y+ LAER+M + PP+ + V Sbjct: 673 AGRAGRKNKQGLVILQTKSPDLPVIHQVIHNDYEQLYYDQLAERQMFKYPPYYRLIYVYL 732 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + L + + S VLGP + + +++++ + Sbjct: 733 KHRKEDVLDLAADTMAAQLRS----GLGDRVLGPDKPPVARIQTLFIKKMIVKVEQNASI 788 Query: 702 QHIINGTLALINTIPDSRKVK---WVLDVDP 729 + + + LA+ I + + + DVDP Sbjct: 789 KKVRDYLLAVQRAILEDERFRSLLVYYDVDP 819 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 17/194 (8%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V +P+P+ + Y LP+ M V+ GCRV VPFGK++ IV +V A+ E Sbjct: 3 KFVDVIVPLPIANQYTYSLPQEMEEMVQIGCRVIVPFGKKKFYTAIVTNVHYAAP-EGYE 61 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 K + EVLDS PV + W A+YY +GDV A+P ++ + + Y Sbjct: 62 TKDIAEVLDSSPVLLPKQYEFWQWLAEYYLCTLGDVYKAAIPSGMKLE---SETLVEYNP 118 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALR----QGKIWRDQVATLEFNDAALQALRKKGLCD 175 E + K+Q+ L L Q ++ + L+ +++L K Sbjct: 119 DFETTAPLPE-------KEQKILDLLSRDTEQCVTQLEKNSGLKNVLTVIKSLLDKEAIF 171 Query: 176 LASETPEFSDWRTN 189 + E RT Sbjct: 172 VKEELKRNYKPRTE 185 >UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERS5_AMOA5 Length = 832 Score = 654 bits (1689), Expect = 0.0, Method: Composition-based stats. Identities = 222/653 (33%), Positives = 329/653 (50%), Gaps = 27/653 (4%) Query: 100 LPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQAL------------AALRQ 147 L + A + L++ PKQ L + Sbjct: 185 LQEKYAPKKEKQIALNKNFVDNTAELQALFEKLEKKPKQLDVLLQYMALVSTNLPEQTQS 244 Query: 148 GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAV 207 I + Q+ + + AALQ L ++ + L + S AV+ L+ Q A+ Sbjct: 245 YFIAKKQLLEKDVSSAALQKLIQQDI--LIEKAVIISRLAQLKAVATPHTTLSPAQTQAL 302 Query: 208 GAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRE 267 +I + T + LL G+TGSGKTE+Y+ ++++VL Q Q L ++PEIGL Q + R + Sbjct: 303 LSIENHFKTKNTALLHGITGSGKTEIYVRLIQSVLEQDGQVLYLLPEIGLATQIVQRLNK 362 Query: 268 RFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSY 327 F + V HS +ER+ W +VIG RSALF PF L +I++DEEH+++Y Sbjct: 363 IFGNKMGVYHSKYASNERVEIWNNVLQNNVQLVIGARSALFLPFDRLQLIIVDEEHETAY 422 Query: 328 KQQEG-WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARP 386 KQ + RYHARD A+ A Q ++LGSATPA+ET N QQ KY L++LT R Sbjct: 423 KQLDAIPRYHARDAALMLATFHQAKVLLGSATPAIETYYNAQQGKYGLVKLTERFNQTPL 482 Query: 387 AIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWI 442 +++L+ ++ + G L+ ++ LQ Q I+F NRRG+A LLC C + Sbjct: 483 PRIELVNLRTEQQRKGIQGEFTSILLQKLESILQQQEQAIIFQNRRGYASYLLCQTCAEV 542 Query: 443 AECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 C +C T HQ + L CH+C VP CP C + L VG GTE++E+TL F Sbjct: 543 PTCQQCSVSLTYHQFRDALVCHYCGFHCKVPPLCPVCDAPTLKNVGFGTEKIEETLQHFF 602 Query: 503 PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGA 562 P + R+D DTT RK + EQ + + G IL+GTQM+ KG F V+LV +LDVD Sbjct: 603 PNKRVQRMDLDTTRRKHSYEQIIDNLESGQTDILVGTQMITKGLDFGQVSLVGVLDVDRL 662 Query: 563 LFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQAL 622 L+ DFR+ ER QL TQV+GRAGR GKQG+V++QT +P+ P+LQ ++ Y+ Q L Sbjct: 663 LYFPDFRANERCFQLITQVSGRAGRRGKQGQVLIQTTNPQLPILQDIINYDYEQMYTQEL 722 Query: 623 AERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPK 682 ER+ + PP+ + + + N + Q L + D +LGP L K Sbjct: 723 GERQKFRYPPYIRLIKITCQHTNERLVKECAQVLAGYLCKLVSEDN---ILGPQAPLVAK 779 Query: 683 RGGRWR---WQILLQHPSRVRL--QHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++R W L + V L + I + + R+++ + DVDPI Sbjct: 780 VRNQYRIDTWVKLAKSSEPVLLAIKQQIQQATKSLTSEKQFRQIRIIFDVDPI 832 Score = 126 bits (318), Expect = 3e-27, Method: Composition-based stats. Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 18/229 (7%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A + LP+P+ + Y +P + VK G RV V GK++ GIV + + P + Sbjct: 12 YFAELILPLPIAKLLTYGIPLNLVDIVKQGSRVIVSLGKKKILTGIVNKIHQRA--PNHP 69 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 K +++VLD EP+ L W A YY +GDV+ ALP + ++ + ++ Sbjct: 70 AKNIIDVLDEEPIVNTYQLALFHWIAQYYMCSVGDVVKAALPSGFKL---SSQSKIYLHP 126 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR----DQVATLEFNDAALQALRKKGLCD 175 A E+ L + +Q +A L+ GK +Q+ + L+ L K + Sbjct: 127 AFEEDSIPLLEN------EQLIVATLKNGKPLSYQQIEQLIGQKEAYKQLKKLIHKEIII 180 Query: 176 LASETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 L E E ++ + + NT + A+ LL Sbjct: 181 LVEELQEKYAPKKEKQIALNKNFVDNTAELQALFEKLEKKPKQLDVLLQ 229 >UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZQ3_HALO1 Length = 858 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 237/615 (38%), Positives = 325/615 (52%), Gaps = 15/615 (2%) Query: 131 SLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAA-LQALRKKGLCDLASETPEFSDWR 187 +L R+PK+ AL+AL G + E N A+ L+AL GL E S + Sbjct: 245 ALIRAPKRAAALSALERAGGAAAVSALREHEPNIASHLRALAGLGLVHFEQRAAEGSSYA 304 Query: 188 TN--YAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + + S L Q A+GAI A F+A+LL G+TGSGKTEVYL + L Sbjct: 305 PDDGLSASAAPPALTDAQRAALGAISGGLAGADFAAYLLHGITGSGKTEVYLHAIAEALD 364 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 G+ A+V+VPEI LTPQ ARFR RF V VLHSGL D ER W + ++G A I +G Sbjct: 365 SGRTAIVLVPEISLTPQLAARFRARFGDLVAVLHSGLTDRERFDEWQRLRSGSARIALGA 424 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSA+F P + +IV+DEEHDSS+KQ+EG RY+ARD+A+ RA +LGSATP+ E+ Sbjct: 425 RSAVFAPVERPAIIVVDEEHDSSFKQEEGVRYNARDVALVRAQRVGGVCVLGSATPSTES 484 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK--GQKVQAGLAPALITRMRQHLQADNQV 421 ++ +Y+LL L R +DL+ + + L L + + L QV Sbjct: 485 YWAAERGRYQLLTLPERPTPRPLPTVERIDLRVYKAESEDMLTAPLRQAIAETLARGEQV 544 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 ILFLNRRGF +LC CG C +C T H+A++ L CH+C QR VP QCPSC + Sbjct: 545 ILFLNRRGFDTFVLCRACGEALRCQQCSVSLTYHRARNMLLCHYCGYQRRVPEQCPSCRA 604 Query: 482 T-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 ++ GLGTE++ +A F ++R+DRD + E L V R IL+GTQ Sbjct: 605 PGTILRKGLGTEKVADAVAERFAPARVARLDRDVATGARIGE-ILGRVARREVDILVGTQ 663 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 M+ KGH FP VTLV +L D L DFR++ER QL TQVAGRAGR + G V++Q+ Sbjct: 664 MVTKGHDFPGVTLVGVLCADTGLSLPDFRASERTFQLLTQVAGRAGRGERPGRVLIQSFR 723 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PE + T Y AF R PP+ V +R + + + L + Sbjct: 724 PEAVAIATAAQHDYAAFYRAEREAREEFGYPPFGHFVALRLDGTDALAVERTAELLIQRV 783 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL---ALINTIPD 717 S L D + VLGP A + GR RW + L +R L+ +I+ L + Sbjct: 784 RGSGL-DAGITVLGPTEAPLARIKGRTRWHLWLLAEARPPLRRLIHAVLYGDIAGASAQL 842 Query: 718 SRKVKWVLDVDPIEG 732 +V+ +DVDP+ Sbjct: 843 PAEVRVSVDVDPVSA 857 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 51/222 (22%), Positives = 86/222 (38%), Gaps = 22/222 (9%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDAS--ELPL 57 A +A+ P+ +F Y +PE + + G RV VPFG + G+V+S+++A E+ Sbjct: 31 RYAELAVQAPVRGSFCYEVPERLRGRLVRGSRVLVPFGGR-GLTGVVLSLAEAPPAEVDP 89 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++A+ +L E + L LWAA YY P G+VL ALP+ +A Sbjct: 90 ARVRAIDGLLADEEPVPVELLELCLWAAAYYEAPPGEVLRAALPVG-----AQVSAQQVV 144 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND------------AAL 165 +A+ S +Q+ L L Q + A L A + Sbjct: 145 ELTETGERALAGEGGALSARQRDVLGRLSQAGGSMSRKALLGRAKDGERGRARALRAADI 204 Query: 166 QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAV 207 L ++GL E + + ++ A+ Sbjct: 205 APLVEEGLVRYRREADRARVRTRTERTAVLSRPPSDDERIAL 246 >UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae RepID=A5USP2_ROSS1 Length = 868 Score = 654 bits (1687), Expect = 0.0, Method: Composition-based stats. Identities = 222/670 (33%), Positives = 313/670 (46%), Gaps = 53/670 (7%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---IWRDQVATL 158 L R + L L R+P+Q+ LA L D + Sbjct: 208 TLARARARPRTERLVRLALPPDEAHTALEGLARAPRQRDLLAYLIDHPDPIPVPDLLTAA 267 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--- 215 + L+AL ++GL D+ + L+ Q A AI A D Sbjct: 268 NADSGTLRALERRGLIDIIARDVWRDPLALLDVPPDTPPTLSLAQQKAWDAIAGALDWCT 327 Query: 216 ---------TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFR 266 + +LL GVTGSGKTE+YL + L G+QALV+ PEI LT Q + RF Sbjct: 328 NATEDRAAPAQTHFLLHGVTGSGKTELYLRAIARALRLGRQALVLTPEIALTTQMVRRFA 387 Query: 267 ERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSS 326 RF + VLHS L+ ER W + + G+A I IG+RSA+F P NLG+I++DEEH+ S Sbjct: 388 ARFPGQLAVLHSELSIGERYDQWRRLRRGDAGIAIGSRSAVFAPLPNLGLIIVDEEHEPS 447 Query: 327 YKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR- 385 YK RYHARD+A A +ILGSATP++E+ + RLL L R A Sbjct: 448 YKHDAAPRYHARDVAQRLATITGSVLILGSATPSVESYAAARAGHLRLLELPERITTATG 507 Query: 386 -----------PAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFA 431 V+D++ + + + AL + + L+ +Q ILFLNRRG A Sbjct: 508 PDGLPHIRTLPLPHVTVVDMRRELAENNRSIFSRALQAALAETLKRGDQAILFLNRRGSA 567 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQ---------AQHHLRCHHCDSQRPVPRQCPSCGST 482 LC DCG CP C TLHQ + L CH C+ + P CP C S Sbjct: 568 SFFLCRDCGHAMTCPSCSSPLTLHQEAGDGQAASSGGMLICHTCNHRELPPALCPHCWSA 627 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 + G+GT+++ + LFP R DRD+ +RKG ++ L R A +L+GTQM+ Sbjct: 628 RIKSFGVGTQRVVDEITTLFPRTRTLRWDRDSVTRKGDHDRLLDRFLRHEADVLVGTQMI 687 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKG P V +V ++ D L+ DFR+ ER QL TQVAGRAGR V++QT+ PE Sbjct: 688 AKGLDLPMVRMVGVVAADTGLYLPDFRAGERAFQLLTQVAGRAGRREAGAHVIIQTYAPE 747 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 H ++ Y AF EQ +A RR PP+ V ++ A + L N I S Sbjct: 748 HYAIRAAQEHDYHAFYEQEIAFRRQTGYPPFARLVRFVYGAGSDARARRAAEALANDIRS 807 Query: 663 SPLAD--EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + ++GP PA + R+RW ++L+ L + IP Sbjct: 808 LAVRHLADDWSLVGPAPAFFRVQRNRYRWHLILRALDPTPLIQALR--------IPPG-- 857 Query: 721 VKWVLDVDPI 730 W++D+DP+ Sbjct: 858 --WIVDIDPV 865 Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 80/203 (39%), Gaps = 42/203 (20%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSV-------SDAS 53 +A VAL F Y +P + ++ G V P +Q+ G+V+ + D + Sbjct: 12 LADVALSA--NAVFTYRVPPSLRPLLRVGHLVWAPL-RQRHVQGVVLDLYAWGGSPHDPA 68 Query: 54 ----------------ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLF 97 + L+ V+++ D + T + RL W ADYY + + L Sbjct: 69 VALSPPALRADPADWFDPQTPTLRDVIDIADPDIALTPAQIRLAHWIADYYRVSLYEALT 128 Query: 98 HALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQV 155 P A W AT +G +V+ +L P ++ L LR+ R+ Sbjct: 129 LMTPPG------IAREAETTWRATVEGHSVNPGALP--PGERDVLYLLRRSGEMTERELR 180 Query: 156 ATLEFNDAALQ----ALRKKGLC 174 L +DA LQ ALR++GL Sbjct: 181 KRLRGSDAELQAIYTALRERGLI 203 >UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rubrum RepID=PRIA_RHORU Length = 811 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 270/798 (33%), Positives = 378/798 (47%), Gaps = 81/798 (10%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 PV V LP+PL +DY +P GM G VRVP G+++E IG+V A E P L Sbjct: 23 PVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGRREE-IGVVWGAG-AGETPPERL 80 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ-------GRPAANA 113 K ++ + P + + W A Y P G VL AL + G +A Sbjct: 81 KPLIGFPEC-PPLPAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRRPSA 139 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK----IWRDQVATLEFNDAALQALR 169 +GQ + SP +Q+ LA L D A + A+ Sbjct: 140 GQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVGPAVVAAMA 199 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGS 228 K GL + + + E+S + G L+ +Q A + +A D FS LL GVTGS Sbjct: 200 KAGLLEAVTRSNEWSPQAPDADRPGPL--LSADQQAAADGLRTALDQGFSGLLLEGVTGS 257 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY + L +G+QALV++PEI L Q RF +RF A HS + + R A Sbjct: 258 GKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQMGAAARRRA 317 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W G A +V+G RSALF P+ +LG+I++DEEHDS++KQ+EG Y+ARD+AV RA Sbjct: 318 WRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARDMAVVRARLG 377 Query: 349 QIPIILGSATPALETLCNVQQKKYR-----------------LLRLTRRAGNARPAIQHV 391 P +L SATP+LET+ N +Q +YR LL L R Sbjct: 378 GFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPPQKWLPTDFA 437 Query: 392 --------------------------------------LDLKGQKVQAGLAPALITRMRQ 413 + L+P LIT + + Sbjct: 438 GPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLSPPLITAVEE 497 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L A QV+LFLNRRG+AP LC CG +CPRC + H+ LRCHHC Q+P+P Sbjct: 498 TLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCHHCGYQQPIP 557 Query: 474 RQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 CP+CG + L P G G E+L + A FP + DT + + Sbjct: 558 ETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAALATRIANHD 617 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 ++IGTQ++AKGHHFP +TLV ++D D L D R++ER QL QVAGRAGRA + G Sbjct: 618 IDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAGRAGRAERPG 677 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 V++QT P HP+++ L F E AER+ + +PP+ V + ++ Sbjct: 678 RVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVISGEDSARV--- 734 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 Q + + + L VLGPVPA GR R ++LL+ V++Q ++ L+L+ Sbjct: 735 -QAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQPVVRHWLSLV 793 Query: 713 NTIPDSRKVKWVLDVDPI 730 + P VK +DVDPI Sbjct: 794 SIPP---GVKVQVDVDPI 808 >UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPQ1_9FIRM Length = 824 Score = 650 bits (1678), Expect = 0.0, Method: Composition-based stats. Identities = 190/629 (30%), Positives = 306/629 (48%), Gaps = 9/629 (1%) Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA--TLEFNDAALQ 166 + + G+ D + KQ++ L + A + Sbjct: 192 SETEKNVRLTDSYLSGEYADKGGKPLTAKQKKVADFLTDADSASVKEVCYNCVVTSAVIN 251 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSG-ERLRLNTEQATAVGAIHSAADTFSA--WLLA 223 + K G+ + S AV + + L+ EQ+ + D+ LL Sbjct: 252 NMEKNGIVECFDNEVSRSLTAGAKAVRSIDDIVLSDEQSAVYSGMSELMDSGKPQCALLK 311 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKT V+L +++ L QGK AL++VPEI LTPQ + F + F + V V+HS L+ Sbjct: 312 GVTGSGKTTVFLKLIDKALKQGKTALMLVPEISLTPQMVRNFTDLFGSNVAVIHSNLSLG 371 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 +R + + + GEA IVIGTRSA+F P N+G+IVIDEE + +YK ++ RY AR +A Sbjct: 372 QRTDEYKRIEKGEARIVIGTRSAVFAPLDNIGIIVIDEEGEHTYKSEKSPRYQARSIAKQ 431 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV---Q 400 R ++L SATP+LE+ +Y+L + +R +++D+K + + Sbjct: 432 RCFYHNATLLLASATPSLESAYFASIGRYKLFEMKKRYSQPVLPDVYLVDMKVEVETGNR 491 Query: 401 AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + + AL ++ +LQ Q IL LNRRG+ + C CG + +CP C+ T H+ + Sbjct: 492 SNFSRALADEIKNNLQRGEQTILLLNRRGYNTYMNCIKCGEVYKCPNCNIPLTYHKTNNC 551 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 + CH+C +C SCGS + G GT+++E ++ LFP + R+D DTT K + Sbjct: 552 MICHYCGYTEVFTGKCKSCGSKFIYSTGTGTQRIEDEISTLFPSARVLRMDADTTMSKFS 611 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 E+ + G I++GTQM+AKG F +VTLV +L +D +L++ D+ E+ L TQ Sbjct: 612 YEKNFDKFKNGEYDIMVGTQMIAKGLDFENVTLVGVLLIDKSLYAGDYLGYEKTFSLITQ 671 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 V GR GR K+G LQT PEH +L + YD F Q R+ + PP+ + Sbjct: 672 VVGRCGRGSKKGRAYLQTFSPEHYVLNLAADQNYDEFFRQECEIRKALLFPPYCDICEIG 731 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 + L + + + VLGP K G++R++I+++ + Sbjct: 732 LSSVDEAVCKKGSDSFVKLFMKNLEGHGIPIRVLGPSACSVAKVNGKYRYRIIIKCKNNK 791 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ TL P KV + D++ Sbjct: 792 EFRSVMQATLLDAYKSPALDKVSFFADMN 820 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 30/233 (12%) Query: 2 PVAHVALPVPL---PRTFDYLLPEGMTVKAGCRVRVPFGKQ-QERIGIVVSVSDASELPL 57 + V + L FDY LP+G V G RV VPFGK ++R+G+V ++ Sbjct: 8 AIVSVVVDKALYSFDNEFDYYLPQGAKVSIGQRVIVPFGKGGKKRVGLVTGFKQNADY-- 65 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 LK + V++ + RL+ W D D + LP + Sbjct: 66 GRLKDIYCVINDGVILGDEALRLMHWLKDNTFCTYFDAVKTILPGGMALNVS-------Q 118 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN-----DAALQALRKKG 172 +A +S P +Q A L K R+ +E+ + L +K Sbjct: 119 RYAISDEFRKAPDSFALEPAEQAVSAMLLGCKSDRELNDMIEYGFDEQQKKLIGRLSEKS 178 Query: 173 LC------------DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA 213 + + + + L +Q + A Sbjct: 179 VLVSLDIIKQRVGSETEKNVRLTDSYLSGEYADKGGKPLTAKQKKVADFLTDA 231 >UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacteria RepID=B8EQ16_METSB Length = 744 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 248/745 (33%), Positives = 360/745 (48%), Gaps = 32/745 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V PV + + Y+ P M + G V P G ++ IG+V + A N L+A Sbjct: 10 VVDVLFPVAVDTAYSYVAPAAMGLVPGAFVEAPLGPRRA-IGVVFAQRPAPPGASN-LRA 67 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V LD P + + W A + P G VL A+ + Sbjct: 68 VAARLDISP-LGDRLRDFIDWVARWGMSPRGMVLRMAIRAPFHAAPEPKRVGLRL----- 121 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV--ATLEFNDAALQALRKKGLCDLASET 180 + +P +++ LAA + G + + + + L ++G+ L + Sbjct: 122 ----TGAAPARLTPARERTLAAAQAGGLMTKAALAKAAGVSASVIDGLIRQGVFTLETLA 177 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PE + + L + A A A A +FS LL GVTGSGKTE Y + Sbjct: 178 PEPAAPVGDPDFRQPLLSQDQAAAAAELAKAVLAQSFSVTLLEGVTGSGKTETYFEAIAA 237 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L G+Q LV++PEI LT Q + RF RF A HSG+ + R W +GEA I+ Sbjct: 238 ALRAGRQTLVLLPEIALTSQFVDRFGARFGAAPVEWHSGIGAARRARIWSAVASGEAKII 297 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSALF PF++LG++++DEEHD +YKQ++G YHARD+AV R EQ +IL SATP+ Sbjct: 298 IGARSALFLPFQSLGLVIVDEEHDGAYKQEDGVVYHARDMAVVRGRIEQCAVILASATPS 357 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQAD 418 +ET N Q +YR L L R G +D++ + G ++PALI + +L Sbjct: 358 IETRVNADQGRYRRLVLKDRFGGRAMPKIEAVDMRLKPPPRGKWISPALIAALADNLGKG 417 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q +LFLNRRG+AP LC CG +CP C + H+ + L CHHC P CP+ Sbjct: 418 QQSLLFLNRRGYAPLTLCRSCGHRFQCPNCAAWLVDHRFRKALICHHCGHMERRPELCPN 477 Query: 479 CGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C + L+ G G E+LE+ A LFP + + D L + V RG I+I Sbjct: 478 CEAVESLMACGPGVERLEEEAAELFPDARLMILSSDLAGGAERLRAEFEAVARGACDIVI 537 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ++AKGH+FP +TLV ++D D L S D R+AER QL QV GRAGR G ++Q Sbjct: 538 GTQLVAKGHNFPGLTLVGVIDADIGLTSGDPRAAERTFQLLQQVTGRAGRFETPGRALVQ 597 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + PEHP+++ +L + F + + +RR LPP+ + ++ A F + L Sbjct: 598 SFQPEHPVMRAILSGDSEKFYAEEIEQRRRAGLPPFGRLAALIVSGNDAASAEAFARALA 657 Query: 658 NLILSSPLAD-------------EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 P +D +L +LGP A GR R+++L++ P LQ Sbjct: 658 RAAHDLPRSDGWTLAAAGGLPTEGELSLLGPAEAPIAILRGRHRFRLLIRAPRSSDLQGF 717 Query: 705 INGTLALINTIPDSRKVKWVLDVDP 729 +N LA P V +D+DP Sbjct: 718 LNALLAA--GPPQRGGVNAAIDIDP 740 >UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteria RepID=A5CXS0_VESOH Length = 680 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 256/729 (35%), Positives = 379/729 (51%), Gaps = 64/729 (8%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VA+ +PL +TF+YL V G VRV ++PL K Sbjct: 16 IIEVAISIPLSKTFNYLCDNE--VSVG--VRV-------------------KVPLAR-KK 51 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V+ ++ L + Y+ R+ R Sbjct: 52 VIGIV------------LAIKDKSRYNET-----------NFRKKREDTLGYKLKSVEKV 88 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 + L+ + L L W + L K L ++ + Sbjct: 89 LDKIPILD--------KSILDLL----FWSANYYHYPISKVISYTLPKNLLLGKEAKIKK 136 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 D+ + + EQ A+ I + + + A+LL GVTGSGKTEVYL ++++++ Sbjct: 137 IIDFPNK--LQQPDFQPTDEQNIAIEQILKSTNQYHAFLLHGVTGSGKTEVYLHIIQSMI 194 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 Q KQ LV+VPEIGLTPQ I F+ R V +HS LN++++L A+L AKNG+A +++G Sbjct: 195 DQKKQVLVLVPEIGLTPQMITHFKSRLKTRVIAIHSQLNETQKLDAYLMAKNGDAGVILG 254 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+F P N G+I+IDEEHD+S+KQQ +RY AR+L RA IP++LG+ATP+LE Sbjct: 255 TRSAIFAPISNFGLIIIDEEHDNSFKQQSSFRYSARNLGFIRAQQSNIPLVLGTATPSLE 314 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 L KK + LT+RAG A ++D++ L+ LI +++Q+L D QV+ Sbjct: 315 LLKIAMDKKITRITLTKRAGGATLPKVSLIDMRS-NTNDALSKILIEKIKQYLSIDKQVM 373 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LF+NRRG+AP C C W A+C CD H+ + L+CHHC ++ CP+C Sbjct: 374 LFINRRGYAPIYYCTQCNWKAQCNHCDSTMVYHRHINRLKCHHCGDEKIPEHVCPNCTKQ 433 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L +G GTE+LE+TL F PI RIDRDTT RK + Q L +++ G I+IGTQML Sbjct: 434 SLKILGYGTEKLEETLYSYFVDTPIIRIDRDTTRRKKSFAQHLEQINTGKPCIIIGTQML 493 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 KGH F ++ +V +LDVD S +FR+ E AQL QV+GRAGR ++GEVV+QT +P+ Sbjct: 494 TKGHDFSNLAMVGILDVDTGFLSTNFRATEYLAQLLIQVSGRAGRHKERGEVVIQTRYPD 553 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HP+ +L Y FA Q L +R +PP++ ++ A N Q+A FL + L+ S Sbjct: 554 HPIFNFVLSSRYTQFASQLLKQRLSAMMPPFSHQALLCANAKNKQNAENFLHEAAILLKS 613 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 + + + GP+ K+ + + + LQ +RV L I++ IN + KV+ Sbjct: 614 IQMNS--VEIWGPIANTIEKKSDYYYFNLYLQSNNRVTLHQILSTFSQHINKLKLKNKVR 671 Query: 723 WVLDVDPIE 731 W LD+DPIE Sbjct: 672 WYLDIDPIE 680 >UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobacteriales RepID=C7M9J5_CAPOD Length = 817 Score = 649 bits (1675), Expect = 0.0, Method: Composition-based stats. Identities = 203/624 (32%), Positives = 333/624 (53%), Gaps = 20/624 (3%) Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKI-------WRDQVATLEFNDAALQALRKK 171 + TE+G L LKRS KQ++ + A + + L+++ +K Sbjct: 192 YQTEEGLQKALELLKRSEKQKKLIMAYFNYINREVLPLKAEKLLEEASVSTTVLKSVIEK 251 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G+ + + + + + + LN Q A+ I T + LL GVT SGKT Sbjct: 252 GIFEEYYLQKDRVSFADSDVSTKK--VLNEVQEEALHQIQKQFQTKNTVLLQGVTASGKT 309 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+Y+ ++ L GKQ L ++PEIGLT I RF+ F + V HS + +ER+ W Sbjct: 310 EIYIELINQYLKAGKQVLYLLPEIGLTVHLINRFKNHFGKSLSVYHSKYSTNERIEVWNN 369 Query: 292 AKNG--EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSE 348 N +A +++G RS+++ PF+ LG+++IDEEHD+SY+Q E R ARD A+ A+ Sbjct: 370 VLNNSPKAQLIVGVRSSVYLPFRQLGLVIIDEEHDNSYRQFEPAPRMQARDTAIMLANIF 429 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGLA 404 + +LGSATP+LE++ NV+ +KY + L++R + P I ++D+K + ++ + Sbjct: 430 KAKTLLGSATPSLESMHNVKTEKYGFVYLSKRYADFLPPIIELIDIKDKHHRKRMNGHFS 489 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 LI + L QV+LF NRRG+AP + C CG + +CP CD T HQ+ + LRCH Sbjct: 490 DVLIKEITNTLSQGRQVLLFQNRRGYAPIVQCMQCGTVPQCPHCDVSLTFHQSSNQLRCH 549 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +C P+P+ C +CGS L G GTEQ+ + L LFP + I R+D+DTT+ K E+ Sbjct: 550 YCGYAIPMPKACIACGSVDLRTKGFGTEQISKELEVLFPNIAIDRMDQDTTNGKYGYEKI 609 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L++ + +IL+GTQM+ KG F ++ LV +++ D + S D+R+ ER QL QV+GR Sbjct: 610 LSKFEQQETQILVGTQMITKGLDFENIGLVGVMNADALIHSPDYRAYERSFQLLLQVSGR 669 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR+ +QG+V +QT++P++P++Q +L + + + ER+ PP+ + + + Sbjct: 670 AGRSAQQGKVFIQTYNPQYPVIQQVLQNDFRGMYQSQIEERQSFLYPPFVQMIKITLKHS 729 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ-HPSRVRLQH 703 N + N + + + VLGP + + +L++ HPS V L+H Sbjct: 730 NFNQVNESAEWFANTLREVFASQRGIDVLGPEFPPISRIRNEYLKDVLVKVHPSEVSLRH 789 Query: 704 I---INGTLALINTIPDSRKVKWV 724 I I + R ++ Sbjct: 790 TKEHIRRIETSFQAISNFRAIRVS 813 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 73/221 (33%), Gaps = 11/221 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M V LP+PL + F Y + E ++ G RV VPFGK + IV + P Sbjct: 1 MYFVDVILPLPLSKLFTYRINEDEAHFLQMGMRVAVPFGKSKVYTAIVHHIHTVE--PSY 58 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 + K + +LD P+ T W AD+Y +G+VL ALP Sbjct: 59 DTKDIEYILDETPIITPQQIEHWQWIADFYMCTLGEVLKSALPSAFLLE------SETII 112 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 E+ L + + ++ +++L +KG ++ Sbjct: 113 EIAEKELNSTLFTDDEWQVYEALHYKTALKGSEVSKIIPKNKALKVMKSLVEKGAARISE 172 Query: 179 ETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 E + Y + A+ + + Sbjct: 173 RIFEKYVPKLIKYIRLSSEYQTEEGLQKALELLKRSEKQKK 213 >UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGJ9_9BACT Length = 825 Score = 649 bits (1674), Expect = 0.0, Method: Composition-based stats. Identities = 208/641 (32%), Positives = 324/641 (50%), Gaps = 22/641 (3%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF----- 160 + + + + +E+ +SL+++PKQ L A+ ++ + Sbjct: 189 KPKRVRYVSLAKHYHSEESLKALFDSLQKAPKQLAVLMAIFTDSTGHKELKKVSILKSKS 248 Query: 161 --NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 + ++ L KG+ + + + V G + L+ Q ++ I D Sbjct: 249 GSGSSQIKTLIDKGVLEEQYQDEHRLLIKQQQDVLGNK-TLSDAQQLSLDEIKKQFDNKK 307 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 L GVT SGKTEVY+ ++E LA G Q L ++PEI LT Q + R RF V V HS Sbjct: 308 VVLFEGVTSSGKTEVYIKLIEEQLAHGNQVLYLLPEISLTSQIVNRLAARFGDQVTVYHS 367 Query: 279 GLNDSERLSAWLKA--KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ-QEGWRY 335 + ER W K + EA +++G RSA+ PF+NLG+++IDEEH++SYKQ RY Sbjct: 368 KFSIHERAEVWQKVLTASPEARVIVGARSAVLLPFENLGLVLIDEEHENSYKQFDPAPRY 427 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL- 394 ARD A+Y A+ Q ++LGSATP+LE+ NV+ KY +RLT R G ++DL Sbjct: 428 QARDSAIYLANLMQSRVLLGSATPSLESAENVRTGKYGWVRLTERYGGVSLPKIELIDLK 487 Query: 395 ---KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + + ++ + LI ++ L QVILF NRRG+AP C CG +C +CD Sbjct: 488 EANRKKMMKGMFSSQLIDAIQHTLSQGKQVILFQNRRGYAPISECTSCGHSPQCTQCDVS 547 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T HQ Q LRCH+C P+P QC +CG L G GT+Q+E+ + FP V + R+D Sbjct: 548 LTYHQTQQQLRCHYCGYNIPMPNQCHACGMLTLTTKGAGTQQIEEQIKAFFPEVAVGRMD 607 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 D+T K + + + + +IL+GTQM+ KG F +V LV +++ D L DFR+ Sbjct: 608 WDSTRGKWSFDAIIESFVQERIQILVGTQMVVKGLDFKNVLLVGVINADHVLNFPDFRAH 667 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER Q+ QVAGRAGR+ ++G V++QT+ PEHP+L+ +L Y+ + ER + P Sbjct: 668 ERSYQMLCQVAGRAGRSDRKGNVLIQTYQPEHPILRQVLDHDYEGLYQTQKKERHEYKYP 727 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P+ + + + L + N++ S VLGPV + ++ Q+ Sbjct: 728 PYYRMIRITFKSRQYDTVNLASEWFTNVLRQSYEG----TVLGPVFPSVARIRNQYHKQL 783 Query: 692 LLQHPSR---VRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +++ ++ + TL I R + DVDP Sbjct: 784 VVKIDHNFTPQVIKKTLERTLQSFQAIAAFRSTRVNFDVDP 824 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 12/165 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ LP+ + Y + ++ G RV VPFGKQ+ +V + + E Sbjct: 12 YIDVLLPLALPKPYTYKITAEQLESLAVGFRVAVPFGKQKIYTALVTKIHQVAP-QTYEP 70 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K++ +LD P+ T S + W A YY G+++ LP L Sbjct: 71 KSIAMILDEVPIVTDSQLKFWEWMASYYMCSQGEIMRACLPAALLLESKTVLVKC----- 125 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL 165 +A ++ S Q AL++ + D+++ + + Sbjct: 126 ----EASEVQLKALSDMQYLVYEALQKQTLTLDEISKIVDRKQVM 166 >UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYZ4_SALRD Length = 825 Score = 648 bits (1673), Expect = 0.0, Method: Composition-based stats. Identities = 239/633 (37%), Positives = 321/633 (50%), Gaps = 31/633 (4%) Query: 121 TEQGQAVDLNSLKRSPKQQQALAALR-------QGKIWRDQVATLEFNDAALQALRKKGL 173 + DL R KQ+ + AL D + + + + +++L +KG+ Sbjct: 194 QHKDAPDDLIEQLRGNKQRAVVRALAGFRAEGTPEPRRTDVMERADASYSTVRSLVEKGM 253 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNT-EQATAVGAIHSAAD--TFSAWLLAGVTGSGK 230 +L + S A Q A+ A+ A D + +LL G+TGSGK Sbjct: 254 LELVEKEVMRSPLDDLPAPDPPPDHDLLPAQQDALDAVTDAVDAHRYGTFLLHGITGSGK 313 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ L+ V A+G+ +++VPEI LTPQT+ RFR F + VLHS +N ER AW Sbjct: 314 TEVYIRALQAVRARGRTGIILVPEIALTPQTVQRFRAHFGDEIAVLHSQMNMGERYDAWR 373 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ-QEGWRYHARDLAVYRAHSEQ 349 + + GEAAI IG RSA+ P ++LG+IV+DEEH++SYKQ RYHARD+AV RAH Sbjct: 374 RLRTGEAAIAIGPRSAVLAPLEDLGLIVVDEEHEASYKQFDPAPRYHARDVAVMRAHRAD 433 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-----PAIQHVLDL----KGQKVQ 400 ILGSATP+LE+ N + KY L L R +A VLDL K ++ Sbjct: 434 AVCILGSATPSLESTMNARWGKYERLELPERVPDASGKTAALPDVRVLDLALQRKKHQLD 493 Query: 401 AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH- 459 LA L +R + Q IL NRRG+AP L C DCGW EC C TLH+ Sbjct: 494 GALADPLREAIRTRVDRGEQTILLQNRRGYAPVLECEDCGWAPECQSCSVSLTLHRHDGG 553 Query: 460 -HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 LRCH+C VPRQCP CG + +G GT+++E L + P I R+DRDTT K Sbjct: 554 EQLRCHYCGYAARVPRQCPECGGRDIHQIGTGTQRVEAELEEVVPDATILRMDRDTTREK 613 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 L G A IL+GTQM+AKG F VTLV ++D D L DFR+ ER QL Sbjct: 614 HGHHDLLRRFENG-ADILLGTQMIAKGLDFSRVTLVGVVDADVGLLFPDFRAEERTFQLL 672 Query: 579 TQVAGRAGR-AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 TQVAGRAGR GEV+LQT +P+H L+ Y+ FAE+ALAERR + PP+ Sbjct: 673 TQVAGRAGRTRELAGEVILQTRNPDHMALRYAQEHDYEGFAEEALAERRELGYPPFGHVA 732 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ--H 695 V + + + V+GP PA + + R++ LL+ Sbjct: 733 TVEFRGPDEDRVERLAENWTEQLRQHAGPAG---VMGPEPAFIQRVKKQHRYRTLLKVRG 789 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 S LQ + T P+ V +DVD Sbjct: 790 GSPGPLQTALRRTRDAHGAPPNGYHV--AVDVD 820 Score = 121 bits (305), Expect = 8e-26, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 7/133 (5%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +V LP+PL + + Y +PE + +AG RV VPF + + GI+V A+E ++K Sbjct: 3 VNVVLPLPLDQAYTYRVPEALVGAAQAGARVLVPF-RNRRLTGIIVGEGPAAETLDFDVK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL----LRQGRPAANAPMWY 117 AV++VLD PV T + L W ADYY P G+ L LP +A Sbjct: 62 AVLDVLDDVPVCTEGLLDLTKWIADYYVCPWGEALKAVLPAGTTVETEHRLTRTDAAPDA 121 Query: 118 WFATEQGQAVDLN 130 W E G+ V + Sbjct: 122 WADHEVGRTVLED 134 >UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7 Tax=Prochlorococcus marinus RepID=A2BPX9_PROMS Length = 758 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 220/738 (29%), Positives = 356/738 (48%), Gaps = 28/738 (3%) Query: 15 TFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASEL--PLNEL---KAVVEVLDS 69 +F YL + + G V V + + G+V+S D S + + + K++ + Sbjct: 27 SFYYLDGNNLGAEVGDIVSVRL-RGRLLNGLVISKKDFSTINNDESNITGGKSIRYLFVE 85 Query: 70 EPV----FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 + S L+ + A +Y + A P + + E + Sbjct: 86 SILQKKIIDESWRELIDFLASFYMVSNLKMFKTAFPPGWIGKYKNFSKGLKDQIWIETKK 145 Query: 126 AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 D+ + K+ + L + W+ ++ FN + ++ K + + Sbjct: 146 EFDIKKNGLTKKEFFLMDTLSKKGNWQSELIKSGFNYTLINSMVSKNYLVKSRRKKNINS 205 Query: 186 WRTNY---AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 ++ ++ ++ L EQ A + A LL G TGSGKTEVY+ + E+ Sbjct: 206 KLNSFLKDHIATKKPNLTNEQKIAFQEFLT-MKPGDALLLWGETGSGKTEVYMRIAEDQF 264 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA-KNGEAAIVI 301 + K L++ PEIGL PQ I RF RFN V HS + R W K K+ E IVI Sbjct: 265 LKKKSCLILAPEIGLIPQLIDRFSRRFNNVVYEYHSNCSPEHRTLIWKKIIKSNEPLIVI 324 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPA 360 GTRSA+F P KNLGVI++DEEHD SYKQ Y AR++A+ +I GSATP+ Sbjct: 325 GTRSAVFLPIKNLGVIIMDEEHDVSYKQDSPMPCYDAREIAIEIVKRNSAKLIFGSATPS 384 Query: 361 LETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQ 416 ++T ++ ++L+R+ +R + ++D++ + + L+ + Q Sbjct: 385 MKTWKKCIFERNFKLVRMIQRISSNETPEIKIIDMRDEFKMGNMKIFSNELLQLLPQLRL 444 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH---QAQHHLRCHHCDSQRPVP 473 Q I+ + RRG + L C +CG++ CP CD ++H Q + LRCH CD + + Sbjct: 445 KKEQAIILIPRRGHSGFLSCRNCGYLINCPNCDVPLSVHLGSQGKKWLRCHWCDHKSRLI 504 Query: 474 RQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 +CP C ST P G+GT+++ + L FP + + R DRDTTS K L++ +G A Sbjct: 505 NRCPDCHSTAFKPFGIGTQRVIEFLNEEFPDLRVLRFDRDTTSGKDGHRDILSKFSKGDA 564 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQMLAKG P++TL ++ DG L D + E+ QL+ QVAGRAGRA K+G+ Sbjct: 565 DILVGTQMLAKGIDIPNITLSVVIAADGLLHRPDISTEEKSLQLFLQVAGRAGRAQKKGK 624 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V+ QT+ P HP++ L + Y+ F + R+ L P+ + +++ N + Sbjct: 625 VIFQTYKPNHPVISYLQKRDYERFLIENSRLRKDANLFPFCTICLLKLSGENYELTESIA 684 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 +L +LS + ++GP P+L K G ++RWQIL+ P ++ + L Sbjct: 685 IKLAKYLLSFC-EKKNWKLIGPAPSLIAKVGKKFRWQILIHGPEGTKIP--LPDRSILWK 741 Query: 714 TIPDSRKVKWVLDVDPIE 731 IP + V +DV+P E Sbjct: 742 LIP--KNVFLTIDVNPAE 757 >UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6Y1_SPHTD Length = 824 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 210/627 (33%), Positives = 312/627 (49%), Gaps = 41/627 (6%) Query: 132 LKRSPKQQQALAALR--------QGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 L R+P Q++AL +R + W D V AALQAL ++G+ ++ Sbjct: 208 LHRAPAQRRALEVIRRRVALAGDEPIPWHDLVRRPGVTAAALQALAERGVIEILELPSPS 267 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVLENV 241 + +G L EQA A + +A +LL G+TGSGKTE+YL Sbjct: 268 APPAQPRPGAGSTY-LTPEQAAAWRTLLAALRAGEPEEFLLHGITGSGKTEIYLRAAAWC 326 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 + +GKQ +++VPEI L QT+ARF ERF V VLHS L + R W G IV+ Sbjct: 327 VGRGKQVIMLVPEIALAAQTVARFNERFPGQVAVLHSTLPPATRYHTWRAVAEGRIPIVV 386 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSALF P + +G++++DEEH+ +YKQ RYHAR++A ++LGSATP + Sbjct: 387 GPRSALFAPLERVGLVILDEEHEGAYKQDNPPRYHAREVARRLIRQHNAVLLLGSATPDV 446 Query: 362 ETLCNVQQKKYRLLRLTRRAG------NARP-------AIQHVLDLKGQKVQAG---LAP 405 T + RLL L R G RP V+D++ + Q + Sbjct: 447 TTYYAAETGAIRLLELPTRVGPRVLGKRGRPEHRTLDLPEVQVVDMRLELSQGHTHIFSR 506 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L +R+ +++ Q ILFLNRRG A + C CG + +CP CD H Q L CH Sbjct: 507 PLQAALRRAVESGEQAILFLNRRGAATLIQCRACGHVEQCPFCDVPLVYHADQRLLLCHR 566 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C+ ++P P +CP+CGS+ + G GT+++E + L PG + R D+D R + Sbjct: 567 CNQRQPPPSRCPACGSSAVGYYGTGTQRVEAEVRRLIPGARVLRWDQDALRRGVEHRHLM 626 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 V R +++GTQM+AKG FP V+ V +++ D L D RSAER QL TQVAGRA Sbjct: 627 QRVLRHEVDVIVGTQMVAKGLDFPLVSTVGIINADTLLHLPDIRSAERTFQLLTQVAGRA 686 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR V++Q++ P+H + Y AF + +A RR PP+ + + Sbjct: 687 GRRTPGARVIVQSYTPDHYAIDAASRHDYAAFYREEIAFRRKHGYPPFRRLIRFVYRHPD 746 Query: 646 NQHAPLFLQQLRNLILSS--PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 ++ +L+ ++ L + +LGP PA K GR++WQILL+ Sbjct: 747 EVTCQTTAAEVADLLAATADRLGARDVDLLGPTPAFTAKVRGRYQWQILLRGADS----- 801 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPI 730 + + ++ P W +DVDP+ Sbjct: 802 --HAVASAVDLDPG-----WAIDVDPL 821 >UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYR8_9BACL Length = 787 Score = 641 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 222/789 (28%), Positives = 376/789 (47%), Gaps = 75/789 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A V + V + + + YL+P+ G RV VPFG + + +V + S SE+ + Sbjct: 2 YAEVIIDVNNHNVNQVYSYLVPDEFKDIDIVGYRVEVPFGTRTVQGYVVDTRSGNSEVEV 61 Query: 58 -NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR-------- 108 N+ K + + D P+ T + L AD + +P L+ Sbjct: 62 TNKFKYIKRLKDDFPILTKEMILLSKVMADELFCTRIQAIETIVPTSLKNKYIEYYELLD 121 Query: 109 ------------------PAANAPMWYWFATEQGQAVDLNSL------------------ 132 N + G + L ++ Sbjct: 122 GNKTLLLDYTKHFNTDNLIEKNKFEKILSIEQIGYLISLKAIRLISRIKEIKNNETEEFY 181 Query: 133 --------KRSPKQQQALAAL-RQGKIWRDQVA-TLEFNDAALQALRKKGLCDLASETPE 182 K + KQ++ + L KI + +V L ++ + L +K + + E + Sbjct: 182 VLDKYEDVKLTKKQKELVDYLITNNKIKKSKVKDRLNIGNSVTKKLLEKNVIRIIEEDVK 241 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLEN 240 N ++ +L+ Q I +T F+ +LL GVTG+GKTE+Y+ ++E Sbjct: 242 HD---INTSILDNNTKLSGHQQEIYDRISENFNTNKFNEYLLHGVTGAGKTEIYIKLVEA 298 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 V+ GK+A+++VPEI LTPQ +FR+ F+ + V+HS LN E+ + W K ++G+ I Sbjct: 299 VIRVGKEAIILVPEIILTPQIEKKFRKVFSDNIAVIHSRLNAKEKYTEWKKIRDGKVKIC 358 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +GTRSA+F PF NLG+I+IDEEH++SYKQ E RY A+D+A R + ++ SATP+ Sbjct: 359 LGTRSAVFAPFNNLGIIIIDEEHENSYKQTESPRYDAKDIARKRGIYNKSTVVYASATPS 418 Query: 361 LETLCNVQQ-KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 ++ N ++ LL+LT R N P I V + + V +A L+T++++ ++ Sbjct: 419 VDLYYNFEKNNPNNLLKLTHRFNNKLPMINIVHTAEKEDV---IASELLTKIKEKIEKKE 475 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QV+L +N+RG+ + C CG + +C CD H+ + L CH C Q+ + C Sbjct: 476 QVLLLMNKRGYTNFIRCFSCGHLYKCENCDISLNYHKHDNSLHCHFCGYQKKISNILKCC 535 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 LV G +++E+ L PGV I+R+D DTTSRKGA E+ L + + IL+GT Sbjct: 536 EHPELVSGNYGIQRVEEYLYQNIPGVRITRMDSDTTSRKGAYERLLTDFKNHKSDILLGT 595 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM++KG FP++TLV +L +D + F++ E+ QL Q AGRAGR+ K+GEVV QT+ Sbjct: 596 QMISKGLDFPNITLVGVLSIDNMIALPSFKANEKLFQLLVQTAGRAGRSKKEGEVVFQTN 655 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 + +L + Y+ F + L R+++ PP+ + + ++ + + + + Sbjct: 656 IASN-ILDYAIEHSYEKFYKYELNRRKLIDYPPFCKISFITIKGYDEKKTERVAKMIFDF 714 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV--RLQHIINGTLALINTIPD 717 I L VLGP +L K +++ I +++ +L ++ Sbjct: 715 ISKKQ---TNLSVLGPNKSLFYKINNEYKFNIAIRYQDEDYNKLYSLLKYINDYFAESFS 771 Query: 718 SRKVKWVLD 726 K+ +D Sbjct: 772 REKITITID 780 >UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=18 Tax=Cyanobacteria RepID=Q7V699_PROMM Length = 768 Score = 640 bits (1652), Expect = 0.0, Method: Composition-based stats. Identities = 246/744 (33%), Positives = 358/744 (48%), Gaps = 35/744 (4%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVS----------DASELPLNELKAV 63 R F Y+ + V G V V ++ G+V+ SE P L+A+ Sbjct: 33 RCFTYVDSRRLGVDLGDLVVVRLRGRRMH-GLVMDRRISSPVDRGQDSGSEAPPRHLEAI 91 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI-LLRQGRPAANAPMWYWFATE 122 ++ S V + + A + H +L ALP L Q + P W+ Sbjct: 92 EALVQSAAV-DPLWFGWIEAMAVHCHISSFRMLKAALPPGWLGQRQSHQAEPRRLWWIQL 150 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 + A++ +L + QA A G W+ + F + L K+GL P Sbjct: 151 ESSAINPQNLPQRQADLQAALAAGGGGAWQRDLQAAGFGSGLVNGLIKRGLIRREKRQPT 210 Query: 183 FSDWRTNYAVSGE-----RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + + + + L EQ V A S + LL GVTGSGKTEVYL + Sbjct: 211 DASNGLSCSDACDQDLEVPQSLTVEQQEVVEAFQSQ-PLGTGMLLWGVTGSGKTEVYLQL 269 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK-AKNGE 296 L G+ L++ PEIGL PQ + RFR RF V HSG +D ER+S W + Sbjct: 270 AARELQAGRHCLILTPEIGLIPQLVDRFRRRFGTKVLEYHSGCSDRERVSTWRQGLTAAT 329 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILG 355 +V+GTRSA+F P LG+IV+DEEHDSSYKQ+ YHARD+A+ RA ++LG Sbjct: 330 PLVVVGTRSAVFLPLAPLGLIVLDEEHDSSYKQESPMPCYHARDMAMDRARRTGARVVLG 389 Query: 356 SATPALETLCN-VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 SATP+L + N Q + L RLTRR + HV+D++ + ++ L+ R+ Sbjct: 390 SATPSLVSWKNLAPQGQLALARLTRRISDQPLPPVHVVDMRQELADGHRRLISRPLMERL 449 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH---QAQHHLRCHHCDS 468 +A Q ++ + RRG++ L C CG + +CP CD T+H Q LRCH CD Sbjct: 450 SALPEAGEQAVVLVPRRGYSSFLSCRSCGEVVQCPNCDVALTVHRSRQGHQWLRCHWCDH 509 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + V C CGS P G GT+++ + L G+ + R DRD+T+ + + L + Sbjct: 510 RAEVMSSCHKCGSKAFKPFGAGTQRVMEHLVEELQGLRLLRFDRDSTAGRDGHRRLLEQF 569 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A +L+GTQMLAKG P VTL A+L DG L D ++ E+ QL Q+AGRAGR Sbjct: 570 AAGEADVLVGTQMLAKGMDLPRVTLAAVLAADGLLHRPDLQAGEQSLQLLMQLAGRAGRG 629 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 + G V++QT+ P+HP++ L+ Y F ++ R L P++ ++R + Sbjct: 630 ERPGHVLVQTYCPDHPVIHHLVDGRYGEFLKEEACLRHEAGLVPYSRACLLRLSGDSAAV 689 Query: 649 APLFLQQLRNLILSSPLADEKLWVL-GPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 L I PL + + W L GP PA + GR RWQ+LL P RL + Sbjct: 690 TATAAAVLAEQI--KPLCEAQGWCLVGPAPAPIARVAGRSRWQLLLHGPEESRLP--LPS 745 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 L N +P R V +D DPI+ Sbjct: 746 GSTLWNGLP--RGVSLAVDPDPIQ 767 >UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes RepID=A4CNF8_9FLAO Length = 839 Score = 638 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 221/653 (33%), Positives = 320/653 (49%), Gaps = 25/653 (3%) Query: 98 HALPILLRQGRPAANAPMWYWFATEQGQA---VDLNSLKRSPKQQQALAALRQGKIWRDQ 154 L L+QG A + QA ++S+ R+PKQ + L L Q + D+ Sbjct: 192 LVLQEKLQQGYKPLRARFIRLHPDYEDQAALGELMDSMGRAPKQSELLLHLFQLRRGTDK 251 Query: 155 VATLEF-------NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAV 207 + + A L+AL KG+ + E + LN Q A+ Sbjct: 252 PIRSKVLQEQSGTSRAVLKALIDKGVLEEYF-LEEDRIVSPGGGAQHQPPELNALQEEAL 310 Query: 208 GAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRE 267 GAI S ++ LL GVT SGKTEVYL ++ +++A G+Q L +VPEI +T Q + R + Sbjct: 311 GAIRSGFESDRPVLLHGVTSSGKTEVYLRLILDMVAAGRQVLYLVPEIAITEQLVRRLQR 370 Query: 268 RFNAPVEVLHSGLNDSERLSAWLKAKNGE--AAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 V V HS + ER W + GE A++++G RSALF PF +LG+IV+DEEH++ Sbjct: 371 VLGHRVAVFHSRHSMQERAELWYHVRAGEEKASVILGARSALFLPFADLGLIVVDEEHEN 430 Query: 326 SYKQ-QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNA 384 +YKQ RYHARD A+ A ++LGSATP++E+ N + KY RL RR G+ Sbjct: 431 TYKQFDPAPRYHARDAAIVLAGLSGARVVLGSATPSIESYHNARSGKYAYARLDRRFGDV 490 Query: 385 RPAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 ++DL + +K+Q + L + L QVILF NRRGFAP + C CG Sbjct: 491 LLPEMELVDLAEQFRKKKMQGHFSERLREEVEGALGQGGQVILFQNRRGFAPIVECASCG 550 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 +C CD T H+ + LRCH+C R + C +CG+ L G GTEQ+E LA Sbjct: 551 HAPQCRNCDVSLTFHRHRKELRCHYCGFHRLLENTCEACGNPTLDTKGFGTEQVEAELAE 610 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 LFP +R+D DTT K A + + IL+GTQML KG F +V LV +++ D Sbjct: 611 LFPKARTARMDLDTTRGKHAYGRIIQAFEARETDILVGTQMLTKGLDFRNVALVGIMNAD 670 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 L FR+ ER QL TQVAGRAGR ++G V++QT++P H +LQ + YDA + Sbjct: 671 SLLNFPHFRAHERCFQLLTQVAGRAGRTRERGRVLIQTYNPNHQILQQVASGAYDAMYAE 730 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALA 680 + ER PP + + + D VLGP Sbjct: 731 QVYEREQFGYPPALRIIRITFRHREYNRVGEGAAWFARSMRMHFGKD----VLGPEFPPV 786 Query: 681 PKRGGRWRWQILLQ---HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + ++ ILL+ + ++ I + N I R ++ + +VD I Sbjct: 787 ARIRNQYHKNILLKIRPGSGLAQTKNSIKRIESSFNAISQFRSIRVIYNVDYI 839 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 53/203 (26%), Positives = 76/203 (37%), Gaps = 11/203 (5%) Query: 2 PVAHVALPVPLPRTFDYL---LPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 V LP+PL R F Y +P G T++ G RV VPFGK + G+VV + Sbjct: 24 RYVEVLLPMPLERNFTYALGDIPPG-TLRPGTRVAVPFGKSKLYTGLVVGFGHRAP-EAY 81 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 E K V VLD EP+ T R W ADYY G+V A+P + Sbjct: 82 EAKEVYRVLDEEPLVTELQLRHWQWIADYYMCTAGEVFRTAVPSVFLLQSETRVMLREGA 141 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ------VATLEFNDAALQALRKKG 172 E+ + + + Q L+ G I + + + LQ ++G Sbjct: 142 DPDEKDLDDTEFLILEALQHQPVLSVGEIGDIVDRKSVLPILHRMIGRDLLVLQEKLQQG 201 Query: 173 LCDLASETPEFSDWRTNYAVSGE 195 L + + A GE Sbjct: 202 YKPLRARFIRLHPDYEDQAALGE 224 >UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes RepID=A6LEB0_PARD8 Length = 820 Score = 638 bits (1645), Expect = 0.0, Method: Composition-based stats. Identities = 217/636 (34%), Positives = 327/636 (51%), Gaps = 29/636 (4%) Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALA-----------ALRQGKIWRDQVATLEFNDA 163 YW E LKR+ KQ+ L AL + ++ + + A Sbjct: 192 EAYW--DETKLQAVFEELKRAKKQELLLVSFLDLSHTLNPALSKELSKKELLERSGYTSA 249 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 L+ L K+G+ + + E + + E L+ Q A G IH A T LL Sbjct: 250 VLEGLLKRGILESYEK--EVGRLQVSVCRLQEPNPLSPAQEKAYGEIHEAFKTKEVCLLH 307 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVT SGKTE+Y+ ++ VL G+Q L M+PEI +T Q R + F + V HS +D+ Sbjct: 308 GVTSSGKTEIYVRLIHEVLRLGRQVLYMLPEIAITTQITERLAKLFGDKLLVYHSKFSDN 367 Query: 284 ERLSAWLKA-KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLA 341 ER+ W K + E +V+G RS+LF PFK+LG+I++DEEH+++YKQQ+ RYHAR+ A Sbjct: 368 ERVEVWNKLLHSDEPMLVLGVRSSLFLPFKDLGLIIVDEEHENTYKQQDPAPRYHARNAA 427 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ- 400 + A +LGSATP++++ N KY L+ L+ R G+ +D+K K + Sbjct: 428 IVLAGMHGGKTLLGSATPSIDSYFNATAGKYGLVELSTRYGDCLMPEIITVDVKELKRKK 487 Query: 401 ----AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 +P L+ ++R+ L Q ILF NRRGFAP + C CGW+ C CD T H+ Sbjct: 488 IMKDTLFSPLLVEKVREALSRGEQAILFQNRRGFAPMIECRGCGWVPHCVNCDVSLTYHK 547 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 A + L CH+C +P+ CP C T G GTE++E+ +A FP + R+D DT Sbjct: 548 AHNQLVCHYCGYTYRLPQVCPECKGTEFKMQGFGTEKVEEEIAGQFPAAKVERLDFDTAR 607 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 + A E+ +++ +G +ILIGTQML+KG F +V++V +L D + DFR+ ER Q Sbjct: 608 TRTAYERIISDFEKGKTQILIGTQMLSKGLDFGNVSVVGILSADSLMNFPDFRAHERAYQ 667 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L QV+GRAGR K+G V+LQT PEHPL++ + + Y L+ER M + PP+ Sbjct: 668 LMVQVSGRAGRRDKRGTVILQTTQPEHPLIRMVQHFAYKEMVSLQLSERSMFRYPPYYRL 727 Query: 637 VIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ-- 694 +++ N + LQ++ L A VLGPV + +I+L+ Sbjct: 728 IVLILRSRNEE----ALQEMSALYAEKLRARLGERVLGPVTPPITRVQTLHIKKIVLKIE 783 Query: 695 -HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 L+ I+ G + +++ DVDP Sbjct: 784 ISAGIAPLREILEGIHTEMQGYVPFKQLLVHYDVDP 819 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 16/198 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+PL ++ Y +PE M V GCRV V FGK++ IV+ V D + Sbjct: 1 MKYADVILPLPLENSYTYRIPEDMERAVTPGCRVIVHFGKKRYYTAIVMEVHDREPVSDF 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 E K + +LD+ PV R W + YY +GDV ALP L+ A + Sbjct: 61 ETKEIYALLDATPVLRRPQLRFWKWISSYYICKLGDVYKAALPSGLKLESETAVTYNEDF 120 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAA----LRQGKIWRDQVATLEFNDAALQALRKKGLC 174 AT P +Q L A L+ ++ L + +L KG Sbjct: 121 EATAP----------LRPNEQAVLDAFSGVLKLTISELEKKTGLRNVVPIVSSLMVKGAV 170 Query: 175 DLASETPEFSDWRTNYAV 192 +++ E +T + Sbjct: 171 EVSEELKRGFVPKTQAFI 188 >UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRX6_LAWIP Length = 792 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 219/788 (27%), Positives = 353/788 (44%), Gaps = 66/788 (8%) Query: 6 VALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVS-DASELPLNE-L 60 + L P Y LP + K G RV + GK+ R GI++S+ ELP N L Sbjct: 7 ITLLSPPYSLLTYTLPSWLPYTLWKPGLRVAILLGKEMLRTGIILSLHTQKPELPHNVVL 66 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR---PAANAPMWY 117 + ++ L+ P+F++ +++ A + P G + LP+ LR + Sbjct: 67 RPILWALEKIPIFSYEYIKMIQELALRHSIPSGKIFASILPMGLRTTHVQMKCTYKNVLT 126 Query: 118 WFATEQGQAVDLNSL----------------------------------------KRSPK 137 ++ + L + + Sbjct: 127 NLQLKELKHKTEEELHDIGTKWISEENNDWLTSQTESMIVSEECILTVDPPWPIRPSATR 186 Query: 138 QQQALAALRQGKIWRDQVATLEFN---DAALQALRKKGLCDLASETPEFSDWRTNYAVSG 194 Q+ L L + + + AL +L + G+ + E D N Sbjct: 187 QRVILDFLFTNGVVSKKELLQKLGKEYRTALTSLTRYGIISIKQEILTDKDELANTIALL 246 Query: 195 ERL-----RLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 L L EQ V + +LL G+TGSGKT +YL +++ + + Sbjct: 247 PPLIPFGYTLTEEQKEVVTLLKKELQKNQAKTFLLFGITGSGKTAIYLEIIQECIRNNQS 306 Query: 248 ALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEA-AIVIGTRS 305 LV+ PE+ L + + F P + H + ++ + K + ++IGTRS Sbjct: 307 VLVLAPEVALALKLQHEIKTVFPIIPCYLSHGYQSSQQKEDLFRKIVKNQVAKVIIGTRS 366 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF P N+G I++DEEHD+S+KQ E YHA+++A +RA ++LGSATP ++T Sbjct: 367 ALFLPLTNIGSIILDEEHDASFKQGERLIYHAKEIAWFRAVQSNALLLLGSATPDIKTFH 426 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHLQADNQVILF 424 V+ K +++L R G ++D + + A +T +++ L+ Q ++ Sbjct: 427 AVENNKISIVKLHSRVGGGVLPTIKLIDSQQLESKDVTFARESLTTLKETLEVGEQAVIL 486 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRG+AP + C C CP CD + H+ Q L CH+C P CP C T Sbjct: 487 LNRRGYAPIIYCITCRKSIRCPSCDVGMSYHKIQESLICHYCGKSIRFPCPCPFCKGTQF 546 Query: 485 VPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 +P+G GTE++E+ + + P + R+D DTT R G E+ L +G +++LIGTQML+ Sbjct: 547 LPMGQGTEKVEEEIRAILPSDSMVLRLDYDTTRRPGRTEEILKTFAQGKSQVLIGTQMLS 606 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KGHHFP+VTLV +++ D L D+R+AE+ QL TQ AGRAGR K G+V++QTH H Sbjct: 607 KGHHFPNVTLVIVVNADIGLNIPDYRAAEKTFQLLTQSAGRAGRGEKAGQVLIQTHDTSH 666 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 + + Y F + +A R+ PP+ + ++R + +L Sbjct: 667 YCWKFIQQHDYLGFYKYEIALRQKWLYPPFINLALIRLSYPIEWKEGKIWIKKVQSLLQE 726 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKW 723 + V GP + P GR R+Q LL+ + I I T +K++ Sbjct: 727 WANKLNVSVRGPALSPIPILRGRNRFQCLLKSNNW----QHIRTIFYKIQTTALPQKLRV 782 Query: 724 VLDVDPIE 731 VLD+DPI+ Sbjct: 783 VLDIDPID 790 >UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2 Tax=cellular organisms RepID=B1X5Q1_PAUCH Length = 752 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 221/740 (29%), Positives = 349/740 (47%), Gaps = 30/740 (4%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEVLD 68 P + F Y + + +K G VRV K+ RIG+ + SEL L+++ + + Sbjct: 21 PEGKIFTYKNTDRIAIKVGDFVRVRL-KRASRIGLTIKSRTKIPSELKFRHLESIESIFE 79 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP-ILLRQGRPAANAPMWYWFATEQGQAV 127 + + L + YYH +L A P + Sbjct: 80 IN-FIDPNWYSWLYEISIYYHTDFFKILKTAFPWNWSKDDYIKGKTSPLTEAFINLVTER 138 Query: 128 DLNSLK-RSPKQQQALAALRQGKI---WRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 ++ + +Q + + LR I + + F+ + L AL KK + + + + Sbjct: 139 PIDRKAFLTNRQIELINYLRTKSIKNCTSNLLKRQGFSLSTLNALTKKNVIQINLNSNQI 198 Query: 184 SDWRTNYAVSGERL---RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 ++N+ S + +TEQ A LL GVTGSGKT +YL Sbjct: 199 IKEKSNWLDSKIKYLRKIFSTEQYIAFRTFEE-IGQDKPLLLWGVTGSGKTAIYLQAAAE 257 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN--GEAA 298 L +G L++ PEIGL PQ + R +E + HSG + ++R++ W + Sbjct: 258 QLKKGLSVLLLAPEIGLIPQLVDRCQEYLGLEILEYHSGCSKADRITVWRHCYSFASAPT 317 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSA 357 +V+GTRSA+F P LG+I++DEEHDSSYKQ+ Y++RD+A+ R ++ +ILGSA Sbjct: 318 VVVGTRSAVFLPLNPLGLIILDEEHDSSYKQESPMPCYNSRDIALIRRKYHKMKVILGSA 377 Query: 358 TPALETLCNVQ-QKKYRLLRLTRRAGNARPAIQHVLDLK---GQKVQAGLAPALITRMRQ 413 TP+LET + +KK L RL++R + V+D++ + + + LI ++R Sbjct: 378 TPSLETWRSCYGKKKITLARLSKRISGQKLPSVKVVDMRLEFSEGQKGLFSRLLIEKLRT 437 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ---AQHHLRCHHCDSQR 470 + Q I+ + RRG + + C CG + CP CD T+H+ + LRCH CD + Sbjct: 438 LKISGEQAIILVPRRGHSSFMSCRSCGEVMICPNCDVSLTVHKNEEGNNWLRCHWCDYRS 497 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 V +C +CGS+ G GT+++ + L + + + R DRDTT L E + Sbjct: 498 KVAPKCGNCGSSAFKSFGTGTQRVVEGLHQVIENLTLMRFDRDTTPGHNGHRNLLNEFSK 557 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A +L+GTQML+KG P+VTL +L DG L D RSAE QL Q+AGR+GR + Sbjct: 558 GKADVLVGTQMLSKGIDLPNVTLSVVLAADGLLHKPDLRSAEHCLQLLLQLAGRSGRGER 617 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 GE+++QT+ P+HP++ L Y+ F + L+ R+ + P+ ++ N Sbjct: 618 LGEILVQTYCPDHPVIHHLSDGTYENFLIKELSSRKSFGMAPYNRVCLLSISGVCNLSTS 677 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 L + I SS ++GP PA + G RWQILLQ L I L Sbjct: 678 RTAIILASRI-SSVCEKMGWKLVGPTPAT--RIAGLSRWQILLQGSEYSSLSFIKEFQL- 733 Query: 711 LINTIPDSRKVKWVLDVDPI 730 + V+ +D DPI Sbjct: 734 ---NENIEKGVQLSIDPDPI 750 >UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=C2VXT4_BACCE Length = 473 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 176/472 (37%), Positives = 273/472 (57%), Gaps = 6/472 (1%) Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 + RF+ RF + V VLHS L+ E+ W K E +V+G RSA+F PF+NLG+I+ID Sbjct: 1 MVDRFKGRFGSQVAVLHSALSVGEKYDEWRKILRKEVKVVVGARSAVFAPFENLGIIIID 60 Query: 321 EEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR 380 EEH+SSYKQ++ RYHARD+AV+R + PI+LGSATP LE+ ++ Y LL + +R Sbjct: 61 EEHESSYKQEDNPRYHARDVAVWRGQYHKCPIVLGSATPTLESFARAKKGVYELLTMEKR 120 Query: 381 AGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 ++D++ + + AL ++ L+ Q++LFLNRRG + ++C Sbjct: 121 MNEQALPTVEIVDMREELRDGNRSMFSKALHEKIADRLEKKEQMVLFLNRRGHSTFVMCR 180 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 DCG++ +CP CD T H+ H L+CH+C + +P CP+C ST++ G GT+++E+ Sbjct: 181 DCGYVVQCPHCDISLTYHKMNHRLKCHYCSYEENMPTACPACQSTYIRFFGTGTQKVEEE 240 Query: 498 LAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALL 557 + LFP + R+D DTTSRKG E+ L A IL+GTQM+AKG FP VTLV +L Sbjct: 241 ITKLFPEARVIRMDVDTTSRKGMHEKLLKAFGEEKADILLGTQMIAKGLDFPKVTLVGVL 300 Query: 558 DVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAF 617 D L DFR++E+ QL TQV+GRAGR GEV++QT+ PEH ++ + YD F Sbjct: 301 TADTMLHLPDFRASEKTYQLLTQVSGRAGRHELPGEVIIQTYTPEHYSIELAKNQQYDVF 360 Query: 618 AEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVP 677 +Q + RR Q PP+ V+V A +++ + S ++ VLGPV Sbjct: 361 FDQEMQMRRTRQYPPYYYVVLVTVSHPELLKAVQVTEKIVGHLRSH--CSQQTMVLGPVA 418 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + P+ R+R+Q ++++ L++++ ++++ +D +P Sbjct: 419 SAIPRIKDRYRYQCMIKYKREPNLKNVLKMVNEHYQA-EMQKELQISIDFNP 469 >UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribacterium sinus F0268 RepID=C2KVD6_9FIRM Length = 660 Score = 635 bits (1639), Expect = e-180, Method: Composition-based stats. Identities = 200/731 (27%), Positives = 336/731 (45%), Gaps = 81/731 (11%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V + + + + F Y +P +++ G V +PFG+ +++ G V+ + + ++ P + Sbjct: 2 FAKVIVDISHESIDKCFTYRVPTEISLSVGDPVLIPFGRGKKK-GYVIGIEELADFPEEK 60 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + L+ E + L +W A+ Y + L LP+ + + Y Sbjct: 61 IKDIFSPLEKEFSVEKQLLDLAIWMAEEYGTTLNQCLKTVLPVKKKTKNRTKPGKIQYGN 120 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 + K + +Q++ L A+++ E Sbjct: 121 PYP--------APKLNAEQEEVLFAMQEYFQ--------------------------EEE 146 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 P + + E + I GK +YL Sbjct: 147 APSALLFGVTGSGKTELY---------LRLIEDCLAK------------GKEVIYL---- 181 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 +PEI L+ Q+ R RF V +LHS ++ ER + K ++GE + Sbjct: 182 ------------IPEISLSHQSRMRVEGRFPGQVAILHSKMSQGERAESMEKCRSGEVKL 229 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 ++G RSALF PF NLG+I+IDEE + SYK + RY +RD+A R + P++ GSATP Sbjct: 230 LLGPRSALFAPFSNLGLIIIDEEQERSYKSETAPRYESRDVARKRGELAKCPVLFGSATP 289 Query: 360 ALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHL 415 ++ ++ K RL L RA + ++DL+ + + + AL + + L Sbjct: 290 SVNIFREAEEGKVRLFTLKNRAVEGSFLPKLTLIDLRKELEEGNRSIFSKALEEAVLKRL 349 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q ILF+NRRG++P + C CG CP CD TLH+ L+CH+C R + + Sbjct: 350 ERGEQTILFMNRRGYSPFVSCRKCGKSLNCPHCDVSLTLHK-NGMLQCHYCGYSRKLEKN 408 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP+CGS+++ P G GTE+LE+ +FP I R+D DTT +KG E+ L + + A I Sbjct: 409 CPNCGSSYISPFGTGTEKLEKICHAVFPKARILRMDGDTTGKKGKYEEILQDFAQEKADI 468 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+ KGH FP VTLV ++ + F +DF++ E Q+ TQ AGRAGR GEV+ Sbjct: 469 LLGTQMIVKGHDFPKVTLVGIMAAEQLFFQSDFQAREYAFQILTQAAGRAGRGKLPGEVL 528 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +Q++ PE +L+ + + Y AF + R+ ++ PP+ + ++ + L L++ Sbjct: 529 IQSYRPEEEVLELAMEQDYFAFYQSEKKFRQRLEYPPFARMLAIQCSYQEEEFLSLMLEK 588 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 I L E+ + GP PA K +R I ++ S + + N + + Sbjct: 589 TIKRIRGK-LEKEQAELFGPFPATIYKLKDNFRKIIYIKQESHDIIIRLRNLFVEELRKE 647 Query: 716 PDSRKVKWVLD 726 ++ D Sbjct: 648 DKRSLIQLQFD 658 >UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=Desulfovibrio RepID=Q311S8_DESDG Length = 823 Score = 634 bits (1636), Expect = e-180, Method: Composition-based stats. Identities = 240/799 (30%), Positives = 370/799 (46%), Gaps = 72/799 (9%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFG-KQQERIGIVVSVSDASELP 56 + + V+L P T Y LPE + + AG RV VP G + R G++ + A + Sbjct: 27 LRIVSVSLMAPPYTTLHYRLPEWLPEEMWCAGLRVAVPLGARGTLRAGVIAACGCAPDTV 86 Query: 57 LN--ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ-------- 106 ELKAV+ L+ P+ ++ A P G +L LP LR Sbjct: 87 PQGVELKAVLWPLEFVPLLGEEYLEMVRQLAVRQMVPPGQILGMLLPAGLRSAGVRLRVR 146 Query: 107 --GRPAANAPMWYWFATEQGQAV-------------------------------DLNSLK 133 GRP + + V Sbjct: 147 AGGRPRTLRLRDIAKMADSERHVLASHWSAGRVEVLEPETDEAENDICHVTADPPWPVRP 206 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAA---LQALRKKGLCDLASETPEFSD----- 185 + +Q + L L + + + A L L ++GL + E ++ Sbjct: 207 AARRQTEVLEYLWENGPVSRRRMLHDLGTGAQTPLLTLAERGLVHVGPLDAEQAEVCGCG 266 Query: 186 ---WRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTEVYLSVLEN 240 A + L Q A+ A A +D+ LL G+TGSGKT VYL + Sbjct: 267 IDSACHTEAFENQLFELTDAQQAALRACTDAVESDSAETRLLFGITGSGKTAVYLELARA 326 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL-HSGLNDSERLSAWL----KAKNG 295 L +G +++ PE+ L + + RF VL H + ER +L +A+ G Sbjct: 327 CLEKGLSVMLLAPEVALACKLYRDVQLRFPGLPAVLYHGYQSAHEREQQFLNLAAQAREG 386 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 ++ GTRSALF P +LG +V+DEEHD+S+KQ E Y A+++A +R + ++LG Sbjct: 387 RPVLIAGTRSALFLPVASLGAVVLDEEHDASFKQDERLSYQAKEVAWFRVAQSKGALVLG 446 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV-QAGLAPALITRMRQH 414 SATP ++T V++ + L+ R G ++++K V + LAP +TR+++ Sbjct: 447 SATPDVKTFHAVREGHMPGIVLSERVGGGTLPAVELVNIKDNAVKETILAPQTLTRIKET 506 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 + Q ++ LNRRG+AP + C DCG +A CP C+ T H+ + L CH+C P P Sbjct: 507 VTRGEQAVILLNRRGYAPLMYCLDCGSVARCPECEIGLTYHKGRERLVCHYCGHSVPFPS 566 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 C C H +P+G GTE+LE+TL+ + P G + R+DRD+T R G +EQ LA R + Sbjct: 567 PCAKCRGVHYLPMGEGTEKLEETLSTMLPHGKKVLRLDRDSTRRPGRMEQILAAFAREES 626 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQML+KGHHFP VTL + D D L D+R+ ER QL Q AGRAGR + G Sbjct: 627 SILVGTQMLSKGHHFPSVTLAVVADGDIGLNMPDYRATERTFQLLVQAAGRAGRGERPGS 686 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH-NNQHAPLF 652 V++QT P H + Y+ F E+ L RR + PP+ ++R + Sbjct: 687 VIIQTRDPAHYCWDYIRNCDYEGFFEKELEARRKRRYPPFVKLALIRLSYPMDWPQGQDR 746 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + L + + +S + + VLGP PA P GR R+Q LL+ ++ + + Sbjct: 747 VNALASAVRASGR-ELGVSVLGPAPAPLPVLRGRRRFQCLLKASDWKTIRMLFHAAR--- 802 Query: 713 NTIPDSRKVKWVLDVDPIE 731 +P S +++ LD+DP+ Sbjct: 803 QGVPASSRLRLSLDLDPVN 821 >UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQE1_9DELT Length = 778 Score = 633 bits (1633), Expect = e-180, Method: Composition-based stats. Identities = 219/762 (28%), Positives = 344/762 (45%), Gaps = 52/762 (6%) Query: 15 TFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 + Y LP + V G RV VP G+ + V+ S + +LK++ L+ E Sbjct: 22 SLSYALPPYLPVHVWHPGMRVLVPMGQSNKLCCAVLERSVPALPTEKKLKSIFWPLEKEA 81 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR--QGRPAANAPMWYWFATEQGQAVDL 129 V + +L A +G VL LP LR F++ + L Sbjct: 82 VLSADYLEMLENVAARQLTSLGRVLASVLPASLRRVPDGWRDRKNKKIPFSSGRDNREFL 141 Query: 130 NSLKRSPKQQQ--------------------------------ALAALRQGKIWRDQVAT 157 + L Q + + L Sbjct: 142 SRLAEFWMQGELDVKSPGGKEPALTVSSDPPWPIRPQARVQWAVMDLLYAHGPRTASSIR 201 Query: 158 LEF---NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA 214 E + ALQAL+ K +L + +G+ + EQ A+ + Sbjct: 202 AELGQGSTKALQALQDK---ELVCPCKPGDEPEGGSLEAGQDFCFSPEQKEALKHLSPRL 258 Query: 215 -DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAP 272 F A LL G+TGSGKT VYL + L G+ A+++ PEI + Q + R+ A Sbjct: 259 RQGFGACLLHGITGSGKTLVYLDLARQSLEMGRSAILLAPEIAIARQLYQQARQYLPGAA 318 Query: 273 VEVLHSGLNDSERLSAWLKA-KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE 331 + + H S + +++ + + ++IGTRSALF P ++ G+IV+DEEHD S+KQ + Sbjct: 319 IYLHHGSKGPSSKEKTFVELGQEKKPVLLIGTRSALFMPVQDTGLIVLDEEHDESFKQDQ 378 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 Y A+++A Y A E+ ++LGSATP ++T Q L+ + R G + Sbjct: 379 TLIYQAKEIAWYLASREEALLVLGSATPDVKTFHAAQAGHVSLVEMHSRIGKSTLPQVDF 438 Query: 392 LDLKGQK-VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 +DLK V +A +++ ++ Q ++ NRRG++P L+C C +C C Sbjct: 439 VDLKNDPPVFGAMAKTCAEALKETVKRGEQAVIMHNRRGYSPVLMCESCSETVKCANCQV 498 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 T H+ ++ L CH+C P C C + +PVG GTE++E+ LA P + R+ Sbjct: 499 GLTYHKKRNRLVCHYCGISVSFPPVCRHCRGSEFIPVGQGTEKVEEFLARHLPDTQVLRL 558 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 DRD+T G E+ L + +G ARIL+GTQML+KGH FP+VTL +LD D L D+RS Sbjct: 559 DRDSTRSPGKAEKILQDFAQGQARILVGTQMLSKGHSFPEVTLAIVLDGDLGLGLPDYRS 618 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 +ER QL Q++GR+GR K G V +QT +P H Q + Y F +Q ++ R+ Sbjct: 619 SERIFQLLVQLSGRSGRGEKPGRVFIQTRNPGHFCWQYIRDCDYKGFFQQEISRRQKFGY 678 Query: 631 PPWTSHVIVRAEDHNNQHA-PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRW 689 PP+ ++R + FL LR + A K+ +LGP PA+ + R R Sbjct: 679 PPFVRLGLIRFSFPDTWEGKADFLAGLRKKAKQA-AAVSKVTMLGPAPAVLSRLKNRERH 737 Query: 690 QILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 Q L++ ++ L R+V+ LD+DP+ Sbjct: 738 QFLVKSSDWAGIKQAYLELRPLFE---RYRQVRASLDLDPVN 776 >UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Polynucleobacter necessarius RepID=A4SUT7_POLSQ Length = 709 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 251/765 (32%), Positives = 383/765 (50%), Gaps = 95/765 (12%) Query: 1 MP---VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASE 54 MP V V + PL + FDYL + G V VPFG + +GIV+ VSD S+ Sbjct: 1 MPSPIVVQVVVDKPLAQGFDYLWDSNQLGNDPEVGQLVEVPFG-RASLVGIVIKVSDHSD 59 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 L++LK++ V P F + RL+ +A+ YY H +G+ + +P + Sbjct: 60 YELDKLKSITRVA-PLPPFDAASLRLVNFASQYYIHALGETIIPTIPQM----------- 107 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC 174 W + ++AL + + + + E ++ GL Sbjct: 108 ---WKKPDN--------------WEKALEKISAAEEKKRKKIQQEPSE---------GLI 141 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTE 232 D A LN QA A+ + + F LL G TGSGKT Sbjct: 142 DEA--------------------HLNQGQALALEKLRQCSVEKEFKTILLQGQTGSGKTA 181 Query: 233 VYLSVLENVLA-QGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWL 290 V+L+ L+ +L Q L++VPEI LTPQ R R F + VLHSG+++ R AW Sbjct: 182 VFLNWLKGILEDSSSQVLLLVPEINLTPQLERRVRAYFPDKKMVVLHSGVSEKNRGIAWY 241 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +A G+A I++GTR A TP NL IV+DEEHD SYKQQ+G RY ARDLA++RAH +I Sbjct: 242 EAMTGKAQIILGTRLAALTPLPNLRAIVVDEEHDPSYKQQDGIRYSARDLAIWRAHDLKI 301 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---------- 400 P++L SATP+LE+ + +Y +RL +RA A +++ + + Q Sbjct: 302 PVLLASATPSLESWIAAKAGRYEYIRLDQRAQGAALPQVRLINTRDPQSQFSPGDIGRPI 361 Query: 401 --AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + + L + ++L+ Q ++ +NRRG+AP L C+ C W+++C +C Y +H+A Sbjct: 362 SASLITKTLANAISKNLENKKQSLILINRRGYAPILSCNACTWLSKCQQCSSYMVMHKAG 421 Query: 459 H-----HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 L CHHC +P+P CP CG+ L +G GT+++E + ++P + R+D D Sbjct: 422 ALGRRPVLSCHHCGLVKPIPEHCPDCGNADLKTLGKGTQKIEDAIEEMWPSARVLRVDTD 481 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 + + E+ E+H G I++GTQM+AKGH + ++ LVA+LD D LFS DFR+AER Sbjct: 482 ASRKSKGAEELFQEIHAGNVDIVVGTQMIAKGHDYQNIGLVAVLDADSRLFSPDFRAAER 541 Query: 574 FAQLYTQVAGRAGRAGKQ----GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQ 629 QVAGRAGR+ K GE+ ++T +PE + Q LL D F ER + Sbjct: 542 LFAQLVQVAGRAGRSSKDDQGAGEIYIETQYPEAAVFQYLLRHDVDGFLGYLAHERDEAK 601 Query: 630 LPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRW 689 LPP++ +V AE + A FL L+ + S L L V PVP + G R Sbjct: 602 LPPFSYQGLVHAEAKSLDKAIQFLAALKGRLKSRGLMTPGLKVYDPVPRAVMRVAGTERA 661 Query: 690 QILLQHPSRVRLQHIINGTLALINTIPDSR-----KVKWVLDVDP 729 Q++L+ R +LQ ++ + R +++W+++ DP Sbjct: 662 QLVLEADDRRQLQDVLEAVDQDLRNGSQGRISKGDRIRWLIERDP 706 >UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMN6_9SYNE Length = 889 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 228/767 (29%), Positives = 342/767 (44%), Gaps = 114/767 (14%) Query: 50 SDASELPLNELKAVVEVLDSEPVFTHSVWRLLL--WAADYYHHPIGDVLFHALPILLRQG 107 S+ + LK + T ++ +LL W Y P R Sbjct: 150 SETKDYSWQYLKQKIRAPRRTGTATQALQQLLRLGWVESYLATP-------------RSP 196 Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKI---WRDQVATLEFNDAA 164 +P ++ E + + +QQ+ + L + D + L+ Sbjct: 197 QPQKRQAVFLTRTIES------PASGLTARQQELVHGLARCGGELWLSDALQQLKTTSQT 250 Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAG 224 L+ + G +A + A+ + +L +Q+ A+ I + LL G Sbjct: 251 LKKIEALGYLVIAPRE-RLRSSSHSTALPDQPKQLTQDQSAALSQI-QQIQGYEEVLLHG 308 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VTGSGKTEVYL + + K ALV+VPEIGLTPQ RFR RF V V HSGL++ E Sbjct: 309 VTGSGKTEVYLQAIAPHVQARKSALVLVPEIGLTPQLTDRFRSRFGELVCVYHSGLSEGE 368 Query: 285 RLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVY 343 R W + +GE I+IGTRSA+F P N+G+I++DEEHDSS+KQ + YHA +A + Sbjct: 369 RYDTWRQMLSGEPQIIIGTRSAVFAPLPNIGIIILDEEHDSSFKQDQPMPCYHAGLVARW 428 Query: 344 RAHSEQIPIILGSATPALETLCNVQ-------------------------------QKKY 372 RA E P++LGSATP+LET + ++ Sbjct: 429 RAELENCPLVLGSATPSLETWIRFKPLPAPLPQPNDSVEGEFPDSARLLGSTPSQIPRRG 488 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRG 429 L L R ++D++ + + + L T + ++ NQ ILF++RRG Sbjct: 489 HYLCLPTRVHAQPLPPIEIVDMRKELHEGNRTIFSRTLQTALETLVETGNQGILFIHRRG 548 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQ----AQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 + + C CG + ECP CD + HQ A L+CH+C + P +CP C S +L Sbjct: 549 HSSFVSCRSCGHVMECPNCDVSLSYHQTHAEAAARLQCHYCGVSQAHPSKCPKCLSPYLK 608 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G GT+++ LA P + R D DTT KGA LA RG A +L+GTQML KG Sbjct: 609 KFGSGTQRVVNDLAKYLPQIKCIRFDSDTTRNKGAHRALLARFARGEANLLVGTQMLTKG 668 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 P V LV ++ DG LF DFR++ER Q TQVAGRAGR + G V++QT+ PE+ + Sbjct: 669 IDLPQVVLVGVIAADGLLFMPDFRASERAYQTLTQVAGRAGRGEQPGRVIVQTYSPENAV 728 Query: 606 LQTLLYKG------------------------------YDAFAEQALAERRMMQLPPWTS 635 +Q L Y+ F +Q L +R +Q PP+ Sbjct: 729 IQALRGSSTEDEQGISMPQLEKKPMAKQQAIKPQMIDQYEQFLQQELRDRAELQYPPFGR 788 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL-----------WVLGPVPALAPKRG 684 +++R + +L + + + L L +LGPVPA + Sbjct: 789 LILLRLSGLEPETVEKAAARLADKLEAINLEVTPLEATDKNTAASYELLGPVPAPIHRVA 848 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 R+RW ILL+ + L ++ + + + +DVDP+ Sbjct: 849 RRYRWHILLKLAPKAPLPNLTR--------LRPPKGISLTIDVDPLN 887 Score = 80.7 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 85/233 (36%), Gaps = 18/233 (7%) Query: 3 VAHVALPVP--LPRTFD---YLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD--ASEL 55 A V + P R FD Y +P + V +G V VPFG Q G+V+ + +++ Sbjct: 2 WADVLVDCPGTANRAFDTYIYRVPSELVVSSGDIVGVPFGAQL-IGGVVIRILTCLPNQV 60 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 +K + V++ FT W+LL+ DYY P+ ++ ALP L + Sbjct: 61 SAEAIKPIESVINKA-FFTKGYWQLLIRVEDYYQTPLIRIVRAALPPGL-----LSRTQR 114 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 S +S Q AL + + + ++ ++A R+ G Sbjct: 115 RVRLCQSISSETVKLSGYQSKLSQSALLLIETLNNSETKDYSWQYLKQKIRAPRRTGTAT 174 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQA----TAVGAIHSAADTFSAWLLAG 224 A + W +Y + + QA + + S L+ G Sbjct: 175 QALQQLLRLGWVESYLATPRSPQPQKRQAVFLTRTIESPASGLTARQQELVHG 227 >UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T3_9ZZZZ Length = 832 Score = 629 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 227/648 (35%), Positives = 343/648 (52%), Gaps = 33/648 (5%) Query: 101 PILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQ--GKIWRDQVATL 158 P RQGR A + + R+PKQ L G + Q A Sbjct: 197 PPTPRQGR--LRAHLQLGTEPSLARQWAEERASRAPKQAGLARRLADPSGGAYLVQEARR 254 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 E+ +A+ AL GL + E E + L L QA A+ + +A D+ S Sbjct: 255 EYGASAVTALLSTGLAQVQMEPSERQVGPAEPPPAETPLLLTEAQAAALREVRAALDSPS 314 Query: 219 A----WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 A +LL GVTGSGKTEVYL L + L++GK+ +++VPE+ LTPQ +ARF RF V Sbjct: 315 ARPQVFLLQGVTGSGKTEVYLQALAHCLSKGKRGIILVPELSLTPQAVARFNARFPGQVG 374 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GW 333 VLHSGL +++ W + + G +V+G+R A+F P + LG+IV+DEEH+ +YKQQ+ Sbjct: 375 VLHSGLTPAQQADQWWQVRRGSYPVVVGSRGAVFAPQRELGLIVLDEEHEWTYKQQDSAP 434 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG------NARPA 387 YHAR++AV A ++LGSATP + + + +YRLL L R G A A Sbjct: 435 HYHAREVAVRLAELTGAVVLLGSATPDVVSAYRARGGQYRLLTLPHRIGPSGATATAGMA 494 Query: 388 IQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAE 444 V+D++ + + + +L + +++ + +Q ILFLNRRG A + C CG++ Sbjct: 495 RAEVVDMRQELREGNRSAFSRSLQSALKECIGGGHQAILFLNRRGAASVVQCRSCGFVVR 554 Query: 445 CPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG 504 C +C YT H A+ L CH+C+ R +P CP C +L +GLGT+++ + + L G Sbjct: 555 CWQCASPYTYHGAEG-LVCHYCNRHRKMPATCPECRRPNLRYLGLGTQRVAEEVEHLLSG 613 Query: 505 VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALF 564 V + R DRDT A ++ L G A +L+GTQM+AKG H P VTLV + D L Sbjct: 614 VRVLRWDRDTARTGRAHQELLERFTSGQADVLVGTQMVAKGLHVPAVTLVGAVLADIGLH 673 Query: 565 SADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 D+R+AER Q+ QVAGRAGR + G+V++QT+ P+H +++ + Y+AF E+ LA Sbjct: 674 IPDYRAAERTFQVLCQVAGRAGRGAEPGKVIIQTYLPDHYAVRSAQSQEYEAFYERELAF 733 Query: 625 RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL--SSPLADEKLWVLGPVPALAPK 682 RR + PP+ V + + + Q++ + + A + V+GP PA P+ Sbjct: 734 RRAHRYPPFGRLVRLLFGHADAATSRQEAQRMAAALKRAAREWAISHVDVVGPAPAYPPR 793 Query: 683 RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 G WRW +LL+ + L L + P+ W++DVDP+ Sbjct: 794 VRGLWRWHLLLRGDNPRLL-------LDKVLVPPN-----WLVDVDPV 829 Score = 98.0 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 73/206 (35%), Gaps = 23/206 (11%) Query: 1 MPVAHVALPVPL---PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +P A V + VP F Y +P M ++ G VRVPFG++ G+VV ++ Sbjct: 23 LPYADVVVSVPTTAPDDAFTYAVPADMDLEPGHLVRVPFGRRYAY-GVVVGR--TGQMKA 79 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 K V ++ EP+ T L W + YY L LP R Sbjct: 80 GYAKPVQRLVFPEPLLTPKQLDLGRWVSGYYQAHWFAALAPMLPPGFR--------TPTQ 131 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE----FNDAALQALRKKGL 173 A D L + Q+ L+ LR+ + +++L + GL Sbjct: 132 AIVRLVDGATDEAGLSSAA--QRLLSYLRRRPGAARLATLTRLLGPWVPNVVRSLSRAGL 189 Query: 174 CDL---ASETPEFSDWRTNYAVSGER 196 ++ TP R + + E Sbjct: 190 VEVGWSEPPTPRQGRLRAHLQLGTEP 215 >UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0C0_THERP Length = 812 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 238/822 (28%), Positives = 358/822 (43%), Gaps = 110/822 (13%) Query: 2 PVAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A + L P Y +P + ++ V VP + + R+G+V S+ + E P Sbjct: 5 RYADIVLELEPGERRPLLTYGVPAELADRIRLYQAVWVPL-RDEVRLGVVASLHE--EAP 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL-------------PIL 103 ++ VV V++ E V T W L W + + + + L P Sbjct: 62 AFAVRPVVGVVEPEFVLTPEQWALAEWLVEETLCTLWEAVALFLPPRLAQRVEVLLRPTG 121 Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRS---------------------------- 135 + Q + L +R+ Sbjct: 122 AVPTGRLSPVQRRLLDLLAQRGPLTLEQAQRALGRSLTTALERAVSTGLIERLPIVRPIQ 181 Query: 136 -------------------PKQQQALAALRQ-------GKIWRDQVATLEFNDAALQALR 169 Q +A +R+ + R + L + A +Q L Sbjct: 182 RVVSEQFLRPRLDSDPPTDAAQGRAYEIIRRWYEEHDGALLPRRFLHRLGLSPATVQMLV 241 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTG 227 ++GL ++ T L L EQ A AI S D LL GVTG Sbjct: 242 QRGLVEVVELP--RGGLPTVQGGPDRPLTLTPEQQQAWEAIRSMFDQDPPRPLLLHGVTG 299 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTE+YL + L +G+QA+V+VPEI L Q + R RF ++HSGL +SER + Sbjct: 300 SGKTELYLRAIGECLRRGRQAIVLVPEIALATQVVQRVAARFPGRTVLVHSGLRESERSA 359 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAH 346 W G+AA+V+G RSALF P +++G+IVIDEEH+++YKQQE RYHAR +A A Sbjct: 360 VWEAIHQGQAAVVVGPRSALFVPLRSIGLIVIDEEHEAAYKQQEPPPRYHARAVAQRLAE 419 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-------------NARPAIQHVLD 393 + ++LGSATP + T + + RL +R G + V+D Sbjct: 420 LHRAVLLLGSATPDVTTAYAAATSQLAVARLRQRVGPLVVGERGEVARARLQLPRVEVVD 479 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 ++ + + AL + LQ QV+L +NRRG A + C CG + CP CD Sbjct: 480 MRLEHQLGHAGLFSRALHEAIAAALQRGQQVLLLINRRGSATLVQCRSCGHVEVCPLCDV 539 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 H + L CH CD +R CP+CG L G GT+++E+ + FP + R Sbjct: 540 PLVYHADRRQLICHRCDLRRLPSTTCPTCGRPALSYYGAGTQRVEREVQQRFPQARVLRW 599 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 DRD R L V R +++GTQM+AKG FP VT V ++ D ++ D+R+ Sbjct: 600 DRDVVQRGNDPRSLLQRVLRREVDVIVGTQMVAKGLDFPAVTTVGIVHADTGIYLPDYRA 659 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 AER QL TQVAGRAGR G VV+QT+ PEH ++ + YDAF ++ LA R+ Sbjct: 660 AERTFQLLTQVAGRAGRHLPGGLVVIQTYTPEHYAIRAASRQDYDAFYQEELAFRQRHGY 719 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS--PLADEKLWVLGPVPALAPKRGGRWR 688 PP+ V + + L +++ + L+ + VLGP PA + G ++ Sbjct: 720 PPFRRLVRLVVRHRDELAGRLASEEMAERLREKARELSARDVEVLGPTPAFVSRIRGLYQ 779 Query: 689 WQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 WQ+L++ R+ I W++DVDP+ Sbjct: 780 WQLLVRGADGPRVVAAI------------PVHGGWIVDVDPV 809 >UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ74_9SPIO Length = 690 Score = 628 bits (1620), Expect = e-178, Method: Composition-based stats. Identities = 194/545 (35%), Positives = 273/545 (50%), Gaps = 8/545 (1%) Query: 188 TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 S L L+ EQ +AV AI + + G+TGSGKTEV+L LA GK Sbjct: 149 AGTDFSASALTLSEEQRSAVEAISGCTGG-EFFYVYGITGSGKTEVFLQAASRALAAGKS 207 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 + +VPEI L+ Q ++RF VLHSGL S+RL+ W + GEA IV+G RSA+ Sbjct: 208 VIYLVPEITLSHQVAETVKKRFGDRCAVLHSGLTGSKRLAEWRRITRGEARIVVGVRSAI 267 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 F P ++LG+I+IDEEHD SYK RYHAR +A+Y P+++GSATP++E + Sbjct: 268 FAPVRDLGLIIIDEEHDGSYKSGFAPRYHARQVAMYLCKKHGCPLVMGSATPSVEAWHLM 327 Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNR 427 + R LRL+ R + L L+ ALI MR+ Q ILFLNR Sbjct: 328 KTGAIRTLRLSERLSGGALPHIRIESLLH--TAGALSAALIDEMRRTKTEGKQTILFLNR 385 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPV 487 RGF+ C +CG C C T H+++ ++CH+C P CP CGS Sbjct: 386 RGFSHFFKCKNCGHELLCKNCSVPLTFHKSEGLMKCHYCGWTAKPPSACPECGSIEAGYT 445 Query: 488 GLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHH 547 +GTE +E+ + FP + RID D + Q L + G IL+GTQM+AKG + Sbjct: 446 SIGTEYIEEQVRKTFPDCTVQRIDTDVLQKNKQAVQILHDFRSGAIDILLGTQMIAKGLN 505 Query: 548 FPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQ 607 FP V LV + D L DFR+AER L QVAGRAGR GEV++QT++P HP + Sbjct: 506 FPGVRLVGIALADTGLQMPDFRAAERTFSLIMQVAGRAGRYVPDGEVIIQTYNPYHPAIV 565 Query: 608 TLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS--SPL 665 + + F Q L +R+ ++ PP+ + + + Q A R L+ P Sbjct: 566 CAQHNDVEGFYTQELHQRQALEFPPFARLIRLVFRSKDQQKAEEAAYGARELLPQLFPPE 625 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 + + +LGP + G R Q+LL+ + +Q I + V Sbjct: 626 GAKDIEILGPSDCMLSLVAGNHRMQLLLRAETLAPMQ---KAVYRFITEYKVAAGVYIET 682 Query: 726 DVDPI 730 DVDP+ Sbjct: 683 DVDPV 687 >UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0K0_UNCTG Length = 661 Score = 627 bits (1617), Expect = e-178, Method: Composition-based stats. Identities = 192/565 (33%), Positives = 305/565 (53%), Gaps = 11/565 (1%) Query: 173 LCDLASETPEFSDWRTNYAVSG--ERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGS 228 + ++ + P+ N ER LN +Q+ AV I+ + ++A+LL GVT S Sbjct: 100 IIPVSMKPPKRIPKNRNKYEKKIYERHILNAQQSNAVNLINESLGKKVYNAFLLYGVTAS 159 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY+ +E VL Q + A++++PEI L Q + +RF A + V HSG+++ E+ S Sbjct: 160 GKTEVYIKAVEYVLKQNRSAIMLIPEISLAIQFVDIMTKRFGASIGVWHSGISNIEKYSL 219 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 + KAKNG I+IG RSA+F PFKNLG+I++DEEH+ +YKQ++ Y R++A R Sbjct: 220 FSKAKNGSIKIMIGARSAVFAPFKNLGLIIVDEEHEHTYKQEQKPSYDTREIAKRRGVYH 279 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA-PAL 407 ++LGSATP+LE+ + + + L+ L R VL L+ + +AGL P Sbjct: 280 NAVVVLGSATPSLESYKDALENRLNLIELNERICKKELPEVKVLTLRDRIFKAGLLLPET 339 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I M + L Q+I+FLNRRG++P ++C CG + +C +C H+ L+CH+C Sbjct: 340 IEAMSKALARKEQIIVFLNRRGYSPTIMCRKCGIVYQCSKCSVSMVFHRNPELLKCHYCG 399 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + +P C C S + G GT+++E L LF I R+DRDT S + E+ Sbjct: 400 LTKNLPVACSVCKSRDIAVFGAGTQKVEDELKKLFKTAKIFRLDRDTASSEENYEKVYRG 459 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + ILIGTQM+AKG FP V+L +++ D +L+ F+S E+ QL TQVAGR+GR Sbjct: 460 IKNEEYDILIGTQMIAKGFDFPRVSLACVVNADTSLYLPGFKSVEKTFQLITQVAGRSGR 519 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +G V++QT+HP+H ++ + +F + + ER+ + PP+ + + + Sbjct: 520 RDMRGSVIVQTNHPQHYAIEYAKNHDFVSFYKTEIEERKKLFYPPYCDVAKISIRNKEEK 579 Query: 648 HAPLFLQQLRNLIL-SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 A ++L +L+ S L +LGPVPA K +R I+++ L+ Sbjct: 580 KADDDSEKLFSLLENSIKSYKLGLKLLGPVPAYIAKLNNVYRQHIIIKGGRENILK---- 635 Query: 707 GTLALINTIPDSRKVKWVLDVDPIE 731 L+ T S ++V P + Sbjct: 636 -LAGLLETFKQSSGTFIGIEVMPSD 659 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 3/132 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M V LPVPL + F YL PE M + G RV+V FGK+ +S + Sbjct: 1 MIVLESVLPVPLNKIFYYLPPENMNPESIVGKRVKVQFGKR-ILTAYAISCRNVESDSGL 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +LK +++++D + + T + + + Y +G+ L +P+ ++ + Y Sbjct: 60 KLKRIIKIIDDDSLITGETMEIADYISKNYVCSLGEALASIIPVSMKPPKRIPKNRNKYE 119 Query: 119 FATEQGQAVDLN 130 + ++ Sbjct: 120 KKIYERHILNAQ 131 >UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK26_MOOTA Length = 821 Score = 626 bits (1615), Expect = e-178, Method: Composition-based stats. Identities = 235/643 (36%), Positives = 332/643 (51%), Gaps = 28/643 (4%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQ 166 R A YW G A L + +R+P+Q + L AL +G AL+ Sbjct: 186 RQAPGVRRPYWAVPRPGAAAALAGMERRAPRQARILRALLEGGPRPAADLAAGNGYTALR 245 Query: 167 ALRKKGLCDLASETPEFSD--WRTNYAVSGE-------------RLRLNTEQATAVGAIH 211 L + GL +L P ++ + + E L+LN +Q A+ AI Sbjct: 246 RLEEMGLIELTLGPPAGAEGMPPSRFEGGSEEYGNHGGAGGGVAPLQLNRDQEEALRAIE 305 Query: 212 SAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA 271 A +LL GVTGSGKTEVYL LA+G++AL +VPE L PQ +AR R+ Sbjct: 306 GALSQGGTFLLYGVTGSGKTEVYLRATRAALARGRRALFLVPEHSLIPQVVARLRQAVGD 365 Query: 272 PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE 331 V V+H L+ ER + W +A+ GE ++ G+RSALF P +LG+I++DEEH SYKQ Sbjct: 366 GVAVIHGNLSPGERAAIWERARRGEIRVIAGSRSALFAPLPDLGLIIVDEEHAGSYKQDA 425 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 RY AR++A+ R H E ++LGSATP+ ET ++ LL+L RR N + Sbjct: 426 APRYDAREVAIKRGHLEGAVVVLGSATPSTETFYLARRGAINLLQLPRRVENLSLPAVEI 485 Query: 392 LDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRC 448 +DL+ + Q L+ L + L A Q ILFLNRRG+AP +LC CG++ C C Sbjct: 486 VDLREEFRAGHQGYLSRRLRQEVAAALAAGRQAILFLNRRGYAPHVLCRRCGYVPLCRHC 545 Query: 449 DHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPIS 508 D T HQ LRCH+C P CP+CG LV +G GT+++E L+PG I Sbjct: 546 DVALTYHQ-DGTLRCHYCGRGEPARANCPACGG-SLVRLGAGTQRVEAEARALWPGTRII 603 Query: 509 RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADF 568 R D DTT+RKG E+ G A IL+GTQ +A+G FP VTLV +++ D +L+ DF Sbjct: 604 RADGDTTARKGRWEEIYRTFAGGHADILVGTQTIARGMDFPGVTLVGVVNADLSLYQPDF 663 Query: 569 RSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 R+ ER QL TQVAGRAGR G+V++QT++P P + + Y F EQ +A RR Sbjct: 664 RARERTFQLLTQVAGRAGRKS-AGKVIIQTYNPADPAITLAAAQDYRRFYEQEIAGRRAG 722 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWR 688 PP+ V V + L I A ++ VLGP P + +R Sbjct: 723 GYPPFVKLVRVGFSGRDEAGVIEAAHDLAGSIKG---AGAQIEVLGPAPGFPVRVQDNYR 779 Query: 689 WQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 WQ++L+ P+ R + + G LA ++ ++DV P+ Sbjct: 780 WQLVLKVPAWSRNKARLAGCLA---NYRPRHDIRMIVDVGPVN 819 Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 51/239 (21%), Positives = 80/239 (33%), Gaps = 22/239 (9%) Query: 3 VAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + VA+ P + +T Y +P M V+ G V V GKQ G+VV + + Sbjct: 5 LVEVAVNSAPGAIDKTLTYRVPPEMAAGVRVGSLVLVTVGKQMA-TGLVVDLQGGTGH-- 61 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 + LK + +VL+++ + L + A+ Y P+ L LP + R Sbjct: 62 SSLKDIRDVLEAD-FLPPHLVELGRYMAERYFCPLAVALSAMLPPATGR-RLERRWRWVP 119 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND---AALQALRKKGLC 174 E A++L SP + A Q+ AL+ L GL Sbjct: 120 TSGEETAAALNLAGYLPSPARAVAAYLAEVAVAGESQLRPFARGRELAGALKILATHGLI 179 Query: 175 DLASETPEFSDWRTNYAVSGERL---------RLNTEQATAVGAIHSAADTFSAWLLAG 224 + R Y R QA + A+ +A L AG Sbjct: 180 REEWNWRQAPGVRRPYWAVPRPGAAAALAGMERRAPRQARILRALLEGGPRPAADLAAG 238 >UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWH7_HERA2 Length = 829 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 221/655 (33%), Positives = 319/655 (48%), Gaps = 45/655 (6%) Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD-----QVATLEFNDA 163 A W T A L L ++P+ A+ + + + ++ + + + Sbjct: 184 AAKPKREWSAQPTSATPAEALAELSKAPRLAAIFQAILEQAVDGEPVLLPELRDVGASLS 243 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF------ 217 L++L + L L L EQ I +A DT Sbjct: 244 HLRSLALRNLIQLEQIEVRRDPLLGRIPPLEFPPELTLEQERGWRQIVAAQDTASRTGKA 303 Query: 218 SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLH 277 LL GVTGSGKTE+YL + L G QALV+VPEI LT Q + RF RF + VLH Sbjct: 304 KPILLHGVTGSGKTELYLRAIGRALRNGGQALVLVPEIALTTQLVRRFAARFPQQLAVLH 363 Query: 278 SGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHA 337 S L+ ER W + + G+A + IG+RSA+++P L +I++DEEH+ S+K + YHA Sbjct: 364 SELSVGERYDEWRRLRRGDAQVAIGSRSAIWSPMSKLQLIIVDEEHEHSFKHEATPYYHA 423 Query: 338 RDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR-----------P 386 RDLAV A +ILGSATP+LET VQ KY +L L R G Sbjct: 424 RDLAVKLAELAGAVLILGSATPSLETAYAVQINKYEVLELHERVGRKTVAGVTKADPIPM 483 Query: 387 AIQHVLDLKGQK---VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIA 443 ++D++ + V++ + L + +++ L Q ILFLNRRG A ++C DCG Sbjct: 484 PPVQIVDMRSELKAGVRSMFSRPLQSAIQRTLDKREQTILFLNRRGIASFVMCRDCGTTI 543 Query: 444 ECPRCDHYYTLHQAQH------HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 +CPRC +H LRCH+C VPR CPSC ST + G+GT+++ + Sbjct: 544 QCPRCAVALAVHATAGDAAAPATLRCHYCGHVDWVPRNCPSCFSTRIRDFGVGTQRVVEE 603 Query: 498 LAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALL 557 + L+P + R DRD T RKG+ E L + + A IL+GTQM+AKG P VTLV ++ Sbjct: 604 VKLLYPQARVMRWDRDVTGRKGSHEALLNQFTQHEADILVGTQMVAKGFDLPLVTLVGVI 663 Query: 558 DVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAF 617 D AL DFRS ER QL QVAGRAGR G+V++Q+++PEH +Q Y F Sbjct: 664 TADTALNLPDFRSGERTFQLLAQVAGRAGRRAGGGQVIIQSYNPEHYAIQAAAQHDYRQF 723 Query: 618 AEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL--RNLILSSPLADEKLWVLGP 675 + +A RR PP++ + + +N+ ++Q + ++GP Sbjct: 724 YREEIAFRRTAHYPPFSRLIRFMTQSPSNKTVERVVRQFDTQLREELERRRIRDWAIIGP 783 Query: 676 VPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 PA K +RW IL++ P L H + IP W +DVDP+ Sbjct: 784 SPAFLQKVRDLYRWHILVRLPDPTDLLHDLK--------IPSG----WTIDVDPV 826 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 47/237 (19%), Positives = 80/237 (33%), Gaps = 23/237 (9%) Query: 3 VAHVALPVPLPR----TFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A VAL LP Y +P + ++ G V VP G ++ + G+V+ S Sbjct: 2 YAQVALNAYLPDNPEAILTYAVPPHLRPLRVGALVWVPLGPRRVQ-GVVLEFSTQRPQGF 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-----RPAAN 112 ++ ++E D E + + L W + + D + +P ++Q RP + Sbjct: 61 V-VRDILEHADPEAIAAPAQLALAQWFSQSQAVRLWDAVQLTMPPGVKQEIERTWRPTEH 119 Query: 113 APMWYWFATEQGQAVDLNSLKR----SPKQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 ++ + L L+R S +Q + + R E AL +L Sbjct: 120 GQKIELGTLDERERAILFHLRRVGEQSERQLRVDLRGSDADLRRSYTELHERGLIALGSL 179 Query: 169 RKKGLCDLASE---TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 + E P + A + RL A AI A LL Sbjct: 180 VSRPAAKPKREWSAQPTSATPAEALAELSKAPRL----AAIFQAILEQAVDGEPVLL 232 >UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI73_SYNFM Length = 814 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 219/573 (38%), Positives = 314/573 (54%), Gaps = 7/573 (1%) Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLL 222 L+ L G + E + RL +Q A+ A+ F ++L Sbjct: 239 LRKLAAAGTVRVEEREEERTFRLAQALPEAPPPRLTPDQQEVFDAVSPYLASGPFQPFML 298 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKTEVY+ ++E L +G+ ALV+VPEIGL+ Q A FR+RF + V HSG+ + Sbjct: 299 FGVTGSGKTEVYMRLVEETLKRGRGALVLVPEIGLSTQLEALFRQRFGERLAVWHSGVPE 358 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 R W G +V+G RSA+F P ++ G+IV+DEEHD SYKQ + RYHARD A+ Sbjct: 359 GARHDQWRDILAGRRTVVLGARSAVFMPVRDPGLIVVDEEHDPSYKQDDHLRYHARDAAL 418 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 RA IP++LGSATP+L+T+ + ++YR L L RR + ++D++ + +A Sbjct: 419 VRARLLGIPVVLGSATPSLQTIHQSRLERYRPLLLPRRILDRPLPTLEIVDMRRESSRAR 478 Query: 403 L-APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + + L T + + LQA +Q +LFLNRRGFA LC CG + +C C T HQ + L Sbjct: 479 ILSHRLRTALAETLQAGDQALLFLNRRGFATCFLCGVCGAVLQCSSCSVSLTYHQREKIL 538 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 RCH+C + VP +CP+CG L P+G GTE++E+ + P I RIDRDT SR L Sbjct: 539 RCHYCGKEEAVPERCPACGHAGLFPLGFGTERVEEEVRRELPDARIVRIDRDTVSRPEDL 598 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + L V G A +LIGTQM+ KGH FPD+TLV +++ D AL DFR+ E QL QV Sbjct: 599 VESLDAVRSGRANVLIGTQMVGKGHDFPDITLVGVINADTALQFPDFRAGETTVQLLMQV 658 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV-- 639 AGRAGR + G V+LQT++ H L+ +L Y+ F + L R ++ PP+ + Sbjct: 659 AGRAGRGEQPGRVILQTYNQFHYTLEAVLALDYERFCDIELQSREQLRYPPFARFLKFLV 718 Query: 640 --RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 R+E + A R + VLGP PA K R+RW + ++ + Sbjct: 719 TSRSEAQTREAARRLAALCRETAERFDASGRPAAVLGPSPAPLLKLKDRYRWHVFVKAWT 778 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 LQ L+ + P R+V+ +D DP+ Sbjct: 779 SRDLQDFTETVLSGARSDPALRRVQLAVDRDPM 811 Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 17/181 (9%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV--KAGCRVRVPFGKQQERIGIVVSVSDASEL---P 56 P A V++ L +T Y +P + + G RV VP G++ G++++ +D P Sbjct: 4 PFAEVSIFSALEKTLHYAIPSELNAGARPGARVLVPLGRRSA-TGLILARADCPPPDMPP 62 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK ++ VLD PV T + L W A YY +P+G+VL ALP Sbjct: 63 EVRLKPILAVLDDAPVLTPDLIALCRWLASYYFYPVGEVLQTALPSGATNAPQVFVRLTP 122 Query: 117 YWFATEQGQAVDLNSL--KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC 174 + Q ++ L +R P L A Q L+ L +GL Sbjct: 123 AGEERAETQRDEIGELLHRRGPTALAELEAACGSPRGFRQK---------LRELENRGLV 173 Query: 175 D 175 + Sbjct: 174 E 174 >UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4N3_CAPGI Length = 818 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 201/613 (32%), Positives = 298/613 (48%), Gaps = 24/613 (3%) Query: 135 SPKQQQALAAL-------RQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWR 187 S Q++ L A + + + E + + L+ + +KG+ ++ +E + R Sbjct: 212 SKAQEKLLWAFVALRSQKQTSITPQQLLEKAEVSASVLKKIVEKGILEVYTEAVD----R 267 Query: 188 TNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 ++A + L Q A+ + + LL GV SGKT +Y ++E LAQGK Sbjct: 268 VSFASDSDTWELTPAQEKALEEVQEQFSQKNTVLLQGVAASGKTLLYSQLIEQTLAQGKS 327 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE--AAIVIGTRS 305 L +VPE+GL+ Q + R F + V H + ER+ W + A V+G R+ Sbjct: 328 VLYLVPEVGLSVQLMNRLEHFFGDKMSVYHGKYSSHERVEVWNNVLANKPKAQFVLGVRA 387 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETL 364 A+ PF +LG++++DEEHD SYKQ++ R+ RD A+ AH +LGSATP+ E+ Sbjct: 388 AVCLPFHDLGLVIVDEEHDLSYKQEQTPPRFQVRDTALMLAHLHGAKTLLGSATPSAESY 447 Query: 365 CNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV----QAGLAPALITRMRQHLQADNQ 420 N Q KY ++L R + ++DLK + Q + L+ + Q L Q Sbjct: 448 YNAQVGKYGFVQLLERYTGIQAPTIELVDLKEKTKKKETQGHFSDTLLAAIEQTLAQHRQ 507 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VIL NRRG+AP L C C I +CP CD T HQ Q+ LRCH+C P P CP+CG Sbjct: 508 VILLQNRRGYAPYLQCDKCDTIPQCPNCDVSLTYHQLQNQLRCHYCGYTIPTPMSCPACG 567 Query: 481 STH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 L GLGTE++E+ L FP I R+D DTT K E+ + RG IL+GT Sbjct: 568 EHSSLKTKGLGTEKVEEELLQFFPKARIERMDMDTTKGKYGFEKIIHHFERGETDILVGT 627 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM++KG FP V LV +++ D L DFR++ER QL + +AGRAGR QG V++QT+ Sbjct: 628 QMVSKGLDFPKVGLVGVMNADLFLHQPDFRASERAFQLLSHIAGRAGRKE-QGRVLIQTY 686 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 +P LQ + Y A L ER PP+ V + + Q + Sbjct: 687 NPFQETLQRIQQGEYTAMMTAQLTERSDFHYPPYYRLVRIIFRHRELERINQAGQWFADG 746 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI---P 716 + + L + VLG + + ILL+ +V L + + L L + Sbjct: 747 L-RTGLTGYPVEVLGAEFPPISRIRNEYIKHILLKIAPKVPLSVVKDYILRLEQSFYSTA 805 Query: 717 DSRKVKWVLDVDP 729 R V +VDP Sbjct: 806 LFRPVMLSYNVDP 818 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 98/265 (36%), Gaps = 37/265 (13%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M VALP+PL + F Y + ++AG RV VPFGK + G+V+ V P Sbjct: 4 MYYTDVALPLPLRQAFTYEVNPEQADFLRAGMRVVVPFGKAKIYTGVVIRVHQHK--PSY 61 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI---LLRQGRPAANAPM 115 K + +LD +P+ + +L W + YY G+VL +P L + + Sbjct: 62 PTKPIEFILDEQPMLSSRQLQLFSWISAYYLSTFGEVLKMGMPSSLLLESETIVEKTSTP 121 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 + + +L ++ ++L ++ + L++L +K Sbjct: 122 ITVATLSDEEFLVYEALGQA-------SSLTTKEVGKVLQRKNPIG--VLKSLLEKDAIR 172 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 L+ + E + + RL E A+ LL G T + K + L Sbjct: 173 LSEKIFEKYQPKVEKYL---RLSSTYEDRNALNT-----------LLEGDTLTSKAQEKL 218 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQ 260 L KQ +TPQ Sbjct: 219 LWAFVALRSQKQ-------TSITPQ 236 >UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H119_9FIRM Length = 675 Score = 621 bits (1603), Expect = e-176, Method: Composition-based stats. Identities = 192/572 (33%), Positives = 306/572 (53%), Gaps = 12/572 (2%) Query: 172 GLCDLASETPEFSDWRTN--YAVSGERLRLNTEQATAVGAIHSAADTFSA--WLLAGVTG 227 G+ + P+ + T+ + G+++ L Q I + S +LL GV G Sbjct: 102 GVISPKGDRPKRALKPTHNLESKDGKKVMLTPTQQALANEIKKEVEASSPEIFLLKGVAG 161 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERL 286 SGKTE+Y++ +E +A K +V++PEI LT Q ARFRE F + ++HSGL ++R Sbjct: 162 SGKTEIYINAVEQAVASSKSGIVLLPEIALTKQITARFREHFGDEKIAIIHSGLTRAQRF 221 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 + +L+ ++ +A +VIG RSA+F P +NLG+I+IDEE DSSYK RY A ++ V R+ Sbjct: 222 NEFLRIRDNDAMVVIGARSAVFAPVRNLGIIIIDEEQDSSYKATNSPRYDAVEVGVMRSR 281 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPA 406 E PI+LGSATPA+ ++ K RLL L R ++++ + + +P Sbjct: 282 FESAPIVLGSATPAISDYYRAKEGKMRLLSLDERYNGGSFPDIEIVNMTDEMRKGNFSPL 341 Query: 407 ---LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 L+ MR + QV+LFLNRRG+AP ++C C I +C +C H+ C Sbjct: 342 SALLMKEMRATIDKGKQVLLFLNRRGYAPIIMCESCKEILKCEKCGIPLVYHREDGRALC 401 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H+C S +C CGS + GLG EQL + + F ++R+D D + G LE+ Sbjct: 402 HYCGSSETAFSKCKKCGSKQIQYRGLGIEQLTELVQGEFKDAKVARLDSDVAVKAGKLEE 461 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L + G +LIGTQ+++KG F +VTL ++++ D L DFR+ ER QL Q AG Sbjct: 462 VLEQFSDGKIDVLIGTQIISKGLDFENVTLASIIEADAGLQIPDFRADERVFQLIVQTAG 521 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 RAGR +G+VVLQT + ++ + Y+ F +A R+ M PP+ S + + Sbjct: 522 RAGRRDDRGKVVLQTLSKDADVVNMAAQQDYEGFYSSEIAFRKKMGYPPFGSIIKLEFSS 581 Query: 644 HNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS--RVRL 701 + A F +N I+ + K+ VLGPVP+ K G +R++++L+ P R + Sbjct: 582 DKKEGALDFANSFKNSIIRTLEGIFKIDVLGPVPSFIQKSDGMYRYRLILKMPREVREKY 641 Query: 702 QHIINGTLALINTIPD--SRKVKWVLDVDPIE 731 H+I + + + S+K + ++D +P + Sbjct: 642 SHLIRWQIDVFKNRKNKASKKERILVDAEPYD 673 >UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGW7_9DELT Length = 857 Score = 618 bits (1595), Expect = e-175, Method: Composition-based stats. Identities = 224/566 (39%), Positives = 301/566 (53%), Gaps = 19/566 (3%) Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLE 239 + D A + L L +Q A+ + +A + F++ LL G+TGSGKTEVYL ++ Sbjct: 289 DLDDGADPGADGSKGLTLTGDQRRALEGLRAAFEAGRFASALLHGITGSGKTEVYLRLIA 348 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 +V+ G A+V+VPEI LTPQ RFR RF V VLHSGL +RL AW + GE I Sbjct: 349 SVIEAGGGAIVLVPEIALTPQLAQRFRARFGDAVAVLHSGLTAQQRLDAWEHIRAGERPI 408 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIG RSA+F P L VIV+DEEHD S+KQ+EG RY+ARD+A+ R S ++LGSATP Sbjct: 409 VIGARSAIFAPVPKLRVIVVDEEHDGSFKQEEGVRYNARDVALVRGRSLDAVVVLGSATP 468 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG--QKVQAGLAPALITRMRQHLQA 417 +LE+ N ++ + L LT R V++L+ + L+ L R+ A Sbjct: 469 SLESWRNAREGRLALWSLTTRPTPRPLPEVEVVNLREHLPDPETLLSARLRQRLLDTANA 528 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY-YTLHQAQHHLRCHHCDSQRPVPRQC 476 Q ILFLNRRG+ AL C CG +CP C T H ++ L CH C P C Sbjct: 529 GEQSILFLNRRGYTTALSCKTCGSFQQCPDCSAPSMTYHLHRNRLMCHLCGHIEAAPSHC 588 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 SCGST L GTE++E +A PGV + R+DRDT+ K AL + L R A +L Sbjct: 589 LSCGSTELEHGAAGTERVEVAIAAALPGVRMLRLDRDTSRGK-ALLELLGRFRRREADVL 647 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 IGTQML+KGH FP VTLV +L D L DFR+ ER QL TQVAGRAGR + G VV+ Sbjct: 648 IGTQMLSKGHDFPGVTLVGVLRADHGLGLPDFRATERVFQLLTQVAGRAGRGDRPGRVVV 707 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT P+HP ++ ++ FAE L R PP +VR + + Q + Sbjct: 708 QTWAPDHPAIRYARTHDFEGFAEHELEARAKSGNPPIGHLALVRIHGTDRRAVDARAQAV 767 Query: 657 RNLIL------------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + S+ A + +LGPV + + R R Q+LL+ SR L+ I Sbjct: 768 ADFARALGRRIVLAAGASATPASAPVEILGPVDSPIERINKRHRMQVLLRARSRRPLRWI 827 Query: 705 INGTLALINTIPDSRKVKWV-LDVDP 729 ++ + R +DVDP Sbjct: 828 LDHLRHRLGPDGRGRSQTVARVDVDP 853 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 54/248 (21%), Positives = 87/248 (35%), Gaps = 30/248 (12%) Query: 10 VPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEV 66 + L R F YL+PE M +AG RV VPFG + +G+V + +L+ ++E Sbjct: 1 MALDRGFTYLVPEDMATPEAGARVLVPFGAR-VLVGVVREAKAEFGPDDDPAKLRELLER 59 Query: 67 LDSE--PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR-----------QGRPAANA 113 +D P + + RL W A+YY P+G+V ALP + G+ +A Sbjct: 60 VDPPGRPALSLDLVRLCEWIAEYYVAPVGEVYRMALPGMAMGVDARRARVSAAGQALVDA 119 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND------AALQA 167 + A L S ++ L A+ G+ + VA A L+ Sbjct: 120 EASPLLSAGSEDAPALASRPLERADRRLLEAIADGQTGKKGVAVATLTRLEPPIPAVLRR 179 Query: 168 ---LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL--- 221 L + L + + + R + I + L Sbjct: 180 LGELAQAELVIVDRDEAKDKQARRELHYRRTDRLRGGADEAGIKQIVGRSKQRRGLLDYL 239 Query: 222 -LAGVTGS 228 L T S Sbjct: 240 ELQADTSS 247 >UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI18_PETMO Length = 764 Score = 615 bits (1587), Expect = e-174, Method: Composition-based stats. Identities = 224/788 (28%), Positives = 355/788 (45%), Gaps = 88/788 (11%) Query: 1 MPVAHVALPVPLPRT----FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M V P+ + F Y ++ G RV + + + G+V S+ +E Sbjct: 1 MYYYEVI---PIGQMVFNGFTYK--SDKKLEIGQRVIIDL-RGKFLPGLVYKESETTEFD 54 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR-----QGRPAA 111 ++K + LD++ +L+ + + PIG+V P L + P + Sbjct: 55 --KIKEIAFPLDNKSFLNEKHIKLMEKVSSKFMAPIGEVARLFFPPLSSDIYKLRITPKS 112 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQA------------------------------ 141 + + ++ ++ KQ + Sbjct: 113 SFSPIQKPIFYKQFLKSFDNASKANKQLREYLDSNLIEIELYRKEITKKIDKFVSLKMDL 172 Query: 142 --LAALRQGKIWRDQVATLEFN-----------------DAALQALRKKGLCDLASETPE 182 + K R+ + L N L L KKG+ +L+ P Sbjct: 173 KEMWKFNVSKSAREVINYLSINGETLESDLYSQGILKKGSTVLNTLWKKGIIELSEGFPI 232 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + + + LN EQ AV AI + +D LL GVTGSGKTEV+ V +L Sbjct: 233 YEE--------NTEISLNDEQRQAVEAIKANSD--KPHLLYGVTGSGKTEVFFEVARPIL 282 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 G + L++VPEI LT + + R ++RF N HSGL SER+ W KA NGE +VI Sbjct: 283 ENGGKVLLLVPEISLTSELMIRLKKRFANYNAAFYHSGLTSSERVQTWYKAVNGELDLVI 342 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P K+L +I+IDEEHD SY Q E Y A D A +R E I +IL SATP + Sbjct: 343 GTRSAIFIPMKDLKMIIIDEEHDQSYYQIENVSYDAIDTACFRKDLEDIQLILSSATPRV 402 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 L + + L ++ R P +Q V K +K + ++ + L+ + +V Sbjct: 403 IDLYKAKANFFYLEKIHTRYFTEMPEVQIVDMKKDEKYNWIFSKKVVENIEISLKKNKKV 462 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 I+F RG+A ++C DCG+I +C CD T H+ + LRCH+C + +P CP CG Sbjct: 463 IVFTPTRGYANYVICSDCGYIFKCDECDVSLTFHKNERKLRCHYCGKESELPNFCPKCGG 522 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 L G GTE++ LA LFP P+ R+DR L + G +I++GT+M Sbjct: 523 FKLQTRGFGTERVMAELAKLFPSQPLVRVDRTVIKTFKDLRNTFNFMKEPGKKIVVGTKM 582 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 + KG D+ LV +LD D D+ + E A L QVAGR+GR K G+V++Q+ P Sbjct: 583 ITKGLDIQDLDLVVILDADRYFNFPDYNAQESTASLLMQVAGRSGRKEK-GKVIIQSFQP 641 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 E+ + ++L+ +D AE L +R++ PP+ + ++ + + A ++ + Sbjct: 642 ENHIYKSLIDHNFDLIAENDLEQRKIYGYPPFVTLFMILVNNPSADKAKAKANEIVEEL- 700 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 S + +LGPV + K G +R+QI+++ + + TL R + Sbjct: 701 SKIENQVDIEILGPVVPIISKLRGNYRYQIIIKSKQKN--HDFLYSTLK-----KHFRDI 753 Query: 722 KWVLDVDP 729 K V+P Sbjct: 754 KIY--VNP 759 >UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XU37_DESMR Length = 792 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 237/791 (29%), Positives = 353/791 (44%), Gaps = 68/791 (8%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VAL P Y +P+G + G R+ VP G + R+G+V A+ P L Sbjct: 5 LAVALTTPPFSVLTYAVPDGFALADFPVGLRLLVPVG-RTLRVGVVAGCGVAAP-PGVTL 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR----------PA 110 + + L+ P+ L A + +G +L LP LR + P Sbjct: 63 RPALWPLERAPLCDAGYLELAASLASRHMATVGRILGAILPRGLRSAKVVFTCRAAGLPK 122 Query: 111 ANAPMWYWFAT--------------------EQGQAVDLNSLKRSP---------KQQQA 141 A W + E G++ L L SP KQ Sbjct: 123 ALTATALWRKSSDERLELAPAWRDGTMACRLEAGESDPLCCLAASPPWPVRPGAAKQVAV 182 Query: 142 LAALRQGKIWRDQVATLEFNDAAL---QALRKKGLCDLASETPEFSDWRTNYAVSGERLR 198 L AL + L + L + GL + + + Sbjct: 183 LDALCDAGPMALSELKAKLGPGTLPLVRRLAELGLVRIEELETAAQVQPAETSAAVALPP 242 Query: 199 LNTEQATAVGAIHSAADTF--SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L EQA A+ ++ A D+ +A L+ GVTGSGKT +Y+ ++ L +G+Q L++ PE+ Sbjct: 243 LTDEQAAAMDSLLPALDSPDGAARLVYGVTGSGKTRLYMELVRRTLERGRQVLLLAPEVA 302 Query: 257 LTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEA-AIVIGTRSALFTPFKNL 314 L + F H + + R + + + G AIV GTRSAL P ++L Sbjct: 303 LAEKLHRAACRAFPEVGPAFYHGYQSPALREALFWRCGGGSPPAIVAGTRSALLLPLRDL 362 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 G+IV+DEEHD ++KQ++ Y A+++ +RA +LGSATP ++T Q + Sbjct: 363 GLIVLDEEHDGAFKQEDRLPYQAKEVGFFRARQSGALFVLGSATPDVKTFHAAQSGHVPM 422 Query: 375 LRLTRRAGNARPAIQHVLDLKGQKVQAG-------------LAPALITRMRQHLQADNQV 421 +RL RR G ++D++G G L A + Q + Q Sbjct: 423 VRLERRVGGGGMPRVEIVDMRGAAKLTGSAVNRETGDRVGVLTDASAAALAQTVAEGGQA 482 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 ++ LNRRG+AP L C DC CP CD T H+ + L CH+C RP P CP CG Sbjct: 483 MILLNRRGYAPLLFCLDCETPVRCPHCDLSLTFHKDRERLVCHYCGHARPHPSPCPGCGG 542 Query: 482 THLVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 T +P+G+G E LE+ LA + P ++R+DRD R LA+ G +R+L+GTQ Sbjct: 543 TSFLPMGVGAEMLEEQLAGVLPAEAAVARLDRDVARRPEEARAVLADFAAGRSRVLVGTQ 602 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 ML+KGHHFPDVTLV D D D+R++ER QL TQVAGRAGR + G V++QT Sbjct: 603 MLSKGHHFPDVTLVIAADADLGRNLPDYRASERAFQLLTQVAGRAGRGERPGRVLIQTRM 662 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PE P +L Y+ F ++ L+ RR + PP+ +VR + L Sbjct: 663 PEDPFFGYVLRGDYEGFFDEELSRRRRLCYPPFVRLGLVRLSFPRDYEEGYALAAAAGEA 722 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + A +LGP PA GR R L++ P ++ + T+ + K Sbjct: 723 MRRSAAAVGARLLGPAPAPLALVAGRRRLHCLIKSPDWPGVRQVFAAG---AKTLEKADK 779 Query: 721 VKWVLDVDPIE 731 V+ LD+DP++ Sbjct: 780 VRCTLDLDPVD 790 >UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepID=Q2GEJ5_NEOSM Length = 709 Score = 613 bits (1582), Expect = e-174, Method: Composition-based stats. Identities = 217/736 (29%), Positives = 355/736 (48%), Gaps = 39/736 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +V LP+PL F Y V G V+V F + ++ G+V SV SE +K Sbjct: 2 YLNVVLPLPLDSGFLYS-SGHFDVYVGSLVKVDF-RGRKITGLVTSVVPESEHEYI-IKE 58 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 ++ V P F+ + L W A Y +G VL AL Y Sbjct: 59 ILAVEQVRP-FSSEYVQFLSWIAYYNFTKLGLVLRSAL-------VKDIPDSAAYILTNN 110 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + L +P + LA R + I D + + +Q L G + + Sbjct: 111 NIERSCL-----TPAVCRVLALFRGSQYITSDTLDAEKIQRKTVQKLIDIGAIERIHASV 165 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + + L+ EQ+TA I + F+ +LL GVTGSGKT VYLS + Sbjct: 166 S-EIKALPEELKKLKFELSDEQSTAREKI--CMEGFTVYLLDGVTGSGKTLVYLSAALEI 222 Query: 242 LAQGK--QALVMVPEIGLTPQTIARFRERFNAPVEV--LHSGLNDSERLSAWLKAKNGEA 297 L + Q +++ EI L R ++ F VE+ HS L+ + R W K +A Sbjct: 223 LQRDAAAQVIMLFSEIALASYIFERIKKSFLGMVEIVEWHSDLSPARRRKNWHKVVTNKA 282 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGS 356 ++IG RSA+ P NL +IV+DEEHD S+KQ +G + Y+ARDLA+ R IP+IL S Sbjct: 283 RLIIGARSAILLPIPNLQMIVVDEEHDQSFKQDQGDFTYNARDLAIMRGKLFNIPVILSS 342 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHL 415 ATP+LE+ NVQ+K + L L RR G A+ V+D++ QKV ++ L + Sbjct: 343 ATPSLESYYNVQKKGFVHLTLERRFGGAQLPDVRVVDMRKAQKVSQHISHELYEELNCTF 402 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q +LFLN+RG+A ++C CG +CP C + H+ + L CH C +RP+ + Sbjct: 403 DSGMQSLLFLNKRGYASIIICSSCGHRMKCPDCIAWLVEHKQNNTLLCHLCGFKRPMITK 462 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C C S ++ G G E++ + + LFP + + DT + + ++ +G I Sbjct: 463 CEECSSDKIISFGPGVEKIAEEIGELFPSKEVLIMSSDTKITEN-----IQKIEKGDVDI 517 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK-QGEV 594 +IGTQ++AKG+ FP +TL+A++D D ++ + D R++E+ Q+ Q GR GR G V Sbjct: 518 VIGTQIIAKGYDFPRLTLLAIIDSDVSMHTGDLRNSEKSFQILQQAIGRVGRRKVYPGRV 577 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 VLQ++ + +++ L + F ++ L R ++PP++ + + + + + Sbjct: 578 VLQSYSTDSVVVEALKNNDRETFYKEELKMRLAEEMPPFSRLISIIISGLIEREVIAYAR 637 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 ++ I + ++ V GP PA R R+R++IL+ P ++++ L Sbjct: 638 KIAKTI----IPIREINVFGPCPAAIGMRKKRFRYRILIVVPKNFFSRNMLTDLLTQFTA 693 Query: 715 IPDSRKVKWVLDVDPI 730 +KV+ +D DP+ Sbjct: 694 ---EKKVEVQVDTDPL 706 >UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=PRIA_RICBR Length = 648 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 196/564 (34%), Positives = 298/564 (52%), Gaps = 14/564 (2%) Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGS 228 K + + + L+ EQ A+ ++ D+ L+ GVTGS Sbjct: 92 IAKLVLPVDIAEKPIKVKEQKINNNFTLPDLSEEQKQALQMLN---DSNKPILIKGVTGS 148 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY ++ LA+GKQALVM+PEI L+ Q I RF+ERF + +S + +++ Sbjct: 149 GKTEVYFYLIAEYLAKGKQALVMLPEIALSTQIINRFKERFGFDPIIWNSSVTKAQKKMI 208 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 + IVIG RS+LF PFKNLG+IVIDEEHD SYKQ +G Y+ARD A+ R+ + Sbjct: 209 LRGILEDKVKIVIGARSSLFLPFKNLGLIVIDEEHDDSYKQDDGVLYNARDTAIVRSTFD 268 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPA 406 + I+L SATP++ET+ N KY ++ L+ R NA ++D+ +++ L+ Sbjct: 269 KAQIVLCSATPSIETMYNANIGKYSVINLSSRYKNAVLPNIEMIDMTKEELPKNCYLSNI 328 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LI ++ +L+ Q +LFLNRRG+AP +LC CG C C + +H++ L CHHC Sbjct: 329 LIKAIKNNLENKEQTLLFLNRRGYAPLMLCKSCGHKFTCKYCSSWMVVHKSSKKLECHHC 388 Query: 467 DSQRPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 Q + CP C L G G E++E+ LFP I+ I +D + Q L Sbjct: 389 GYQSKIFNSCPECLEDESLAICGPGIERIEEEAKTLFPNSKIAVISKDHVKNPEKIAQLL 448 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 ++ ILIGTQM+ KG+HFP++TLV ++D D AD RS+ER QL QV GRA Sbjct: 449 HQMENLEIDILIGTQMITKGYHFPNLTLVGVVDADLGSNHADLRSSERAFQLLHQVGGRA 508 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR +G V LQ+++P++ + + + D F L R+ +PP++ V N Sbjct: 509 GRGNSKGMVYLQSYYPDNIIFSYIKDEREDNFFVNELEVRKAADMPPFSKMASVILSGTN 568 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + + + + ++ +LGP +L K G++R++IL+ + LQ + Sbjct: 569 EHKILEVAKNMVRIAPEA-----QVKILGPASSLMSKLAGKYRFRILIIADKKFNLQKYL 623 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L LI IP +K +D+DP Sbjct: 624 KFWLELIK-IPSFCHIK--IDIDP 644 >UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZW7_PHYMT Length = 785 Score = 612 bits (1579), Expect = e-173, Method: Composition-based stats. Identities = 217/765 (28%), Positives = 368/765 (48%), Gaps = 75/765 (9%) Query: 3 VAHVALPV---PLP-RTFDYLLPEGM--TVKAGCRVRVPFG-KQQERIGIVVSVSDASEL 55 +A V + + L R FDY++PE ++ G RV VPFG K +R+G V + + S+ Sbjct: 2 IAQVVIDLKAFTLRNRHFDYIIPEKFHGMIQKGMRVIVPFGLKDNKRLGYVCDLVNYSDF 61 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP-------------- 101 K ++EVLD EP ++ L V +P Sbjct: 62 AK---KELLEVLDLEPCIDPELFLLAEEILKIPFISKALVYETVIPKGLLINYQKKVLLF 118 Query: 102 --ILLRQGRPAANAPMWYWFATEQGQAVD----------LNSLK-------RSPKQQQAL 142 + + W + L+ LK R ++++ Sbjct: 119 NKKGISEEIIQKFNNKNEWLLNDSEYKKFGVELNKLACKLDILKIQTLLKPRYSEKKETF 178 Query: 143 AAL--------------RQGKIWRDQVATLEFND---------AALQALRKKGLCDLASE 179 ++ + TL A + L KKG+ + Sbjct: 179 YYFNPICKDYHQIQLNPKEKHVIEQFKTTLNIKKIDFLKFSTYAVINNLLKKGIILKYEK 238 Query: 180 TPEFSDWRTNYAVSG-ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 N+++S +++ LN EQ A+G I + +LL G TG+GKTEVYL ++ Sbjct: 239 NLNDFILHHNFSLSKNKKVTLNQEQEEALGQI--DLNKNKVYLLYGKTGTGKTEVYLKLI 296 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 E +L +Q L++VPEI L R + +F + ++HS L+ ER + + KN EA Sbjct: 297 EKILKNKRQVLILVPEIILIAPLAQRLKSKFTEEKISIMHSLLSSKERYNQYKMIKNQEA 356 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 I++GTRSA+F+P ++LG+I+IDEEHD S+ Q+E Y ++LA R +P+ILGSA Sbjct: 357 TIILGTRSAIFSPLQSLGIIIIDEEHDESFIQKEQVSYDVKELAKIRTKYHNVPLILGSA 416 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAP---ALITRMRQH 414 TP+LE+ NVQQ Y+LL L +R + ++D+K + + L P L ++ + Sbjct: 417 TPSLESHYNVQQNIYKLLTLNQRILVNNFPLIKLVDMKKELTKGNLEPFSFELKKKLNET 476 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ + Q I+F+N +G+AP LLC CG++ +C C+ T ++ ++ L+C+HC Sbjct: 477 LKKNEQAIIFINTKGYAPFLLCRFCGYVPKCIECNISLTFYKKKNLLKCNHCGFSLKFKL 536 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP C + G+G E LE L FP + I R D DT ++ E E ++ + Sbjct: 537 ICPKCNQKKIKTFGIGIEYLENYLKQNFPTITIKRSDADTITKISQYENIWNEFNQNKYQ 596 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQ+++KG F +VTLV ++ D L DF+++E+ QL Q +GRAGRA KQG V Sbjct: 597 ILLGTQIISKGLDFSNVTLVGIIAADSLLKIPDFKASEKTFQLLMQTSGRAGRA-KQGTV 655 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++Q++ ++ +++++ ++ L ER++ QLPP+ + + + Sbjct: 656 IIQSYDIDNYVIKSVASYQEKYVVQKLLDERKISQLPPFNYVSKILICHESYLQVFSISK 715 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 ++ IL +++ +LGP+ +L K+ ++R + L++ Sbjct: 716 NIK-YILEQKYNKKEMIILGPILSLISKKNNKYRILLTLKYSKWP 759 >UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDF Length = 745 Score = 609 bits (1572), Expect = e-173, Method: Composition-based stats. Identities = 235/736 (31%), Positives = 345/736 (46%), Gaps = 36/736 (4%) Query: 11 PLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDS 69 L FDYLL G+ V+ G + VPF + + +G+VV ++ + +P +L A V+ Sbjct: 28 ALRGPFDYLLGPGLEHVQVGTLLVVPFAGR-DVLGVVVELAGETGVPPEKLAAPRSVV-- 84 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL--LRQGRPAANAPMWYWFATEQGQAV 127 EP + L W D Y L LP + AT+ G+A Sbjct: 85 EPGVPAELVALARWITDEYCSTPARALGLVLPPGAGRATRPRVRTRRVLVAEATDAGRAA 144 Query: 128 DLNSLKR-SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 + +R +PKQ++ L L + L+ L +GL L Sbjct: 145 LADGGQRLTPKQREVLETLAAAGPLP--ATQTGGDHGGLRRLADRGLLQLEQREQRRRPV 202 Query: 187 RTNYAV--SGERLRLNTEQATAVGAIHSAADTF--------SAWLLAGVTGSGKTEVYLS 236 RL EQ A+ I +A + +LL GVTGSGKTEVYL Sbjct: 203 HAAVGARNGAAPPRLTAEQIAALEPIVAALEAGDGALSPADRRFLLHGVTGSGKTEVYLQ 262 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 L G+ +V+VPEI L PQT+ARF+ RF V VLHS L ER W++ + GE Sbjct: 263 AAAAALRAGRNVIVLVPEIALAPQTVARFQARFGDTVAVLHSQLGQGERYDEWMRLRRGE 322 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A I +G RSA+F P ++G++++DEEH+ +YK + RY AR +A RAH ++ GS Sbjct: 323 ARICVGPRSAVFAPLADVGLVIVDEEHEPAYKHEGDPRYDARRVAARRAHDAGAVLLSGS 382 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP E++ +++ + +LD++ + L P + + Sbjct: 383 ATPRPESVHALRRLRILRR-----VDGRPLPPVEILDMRD--ARHPLHPVTREALGDVRR 435 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A + I+ +NRRG++ L C CG + CP CD LH++Q + CHHC VPR C Sbjct: 436 AGRKAIVLVNRRGWSNFLSCRSCGRVWNCPECDVALVLHRSQRAVSCHHCGHSERVPRTC 495 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLF--PGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 P CGS L G GTE++EQ L P P+ R+D DTT+ KGA+ + L + A Sbjct: 496 PDCGSVSLARHGAGTERIEQELIEAIGDPAFPVFRLDADTTATKGAIAKALGQFDAAPAG 555 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ-GE 593 +L+GTQ++AKGH FPDVTL +LD D L DFR+ ER L Q+AGRAGR G Sbjct: 556 VLVGTQIVAKGHDFPDVTLGVVLDADQTLRFPDFRAEERTFSLVAQLAGRAGRGQHGDGR 615 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V++QT + P + D F L R +++ PP+ S + V + A Sbjct: 616 VLVQTLATDAPSIVAAARHDSDGFLAGELGRREILRYPPFASLIRVVCSAPDAADAHAAA 675 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 + L+ + VLGP A + G+ R Q++++ R + + + Sbjct: 676 DAVARLVDA-----PGATVLGP--APLFRLRGKERSQLVIKATQRRAAVQSVAAAVDAVA 728 Query: 714 TIPDSRKVKWVLDVDP 729 P R+V DVDP Sbjct: 729 RTPVGRRVSLSADVDP 744 >UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independent DNA replication n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X4B4_FLAB3 Length = 834 Score = 606 bits (1563), Expect = e-171, Method: Composition-based stats. Identities = 195/640 (30%), Positives = 327/640 (51%), Gaps = 23/640 (3%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV--------AT 157 + + A + + + A L SLKRSPKQQ+ L + + + +V Sbjct: 200 KAKEVAFLRIKDKESVNKRLAEVLLSLKRSPKQQELLLLILEKETEHPEVPIKKSVIFDE 259 Query: 158 LEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLR-LNTEQATAVGAIHSAADT 216 F L+ L +KGL + E D Y E L L Q A I A Sbjct: 260 GNFAHTQLKTLIEKGLVE---EYLLQKDRLATYEGQIEGLEELTESQQRAKTEIDDAFTN 316 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 LL GVT SGKT +YL +E + G+ L ++PEI LT Q + R ++ + Sbjct: 317 DKNVLLHGVTSSGKTHIYLDKIEETVLAGRNVLFLLPEISLTKQIVQRLERKYGRQLGFY 376 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRY 335 H L D ER+ W K +N E ++IGTR++LF PF+NL +IV+DEEHDS+YK +E + Sbjct: 377 HQKLTDFERVEVWRKVRNNEIKVLIGTRNSLFLPFQNLRLIVVDEEHDSAYKPREVSPFF 436 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 +A+D A A + +ILGSATP++E+ Q++K + + L R G+ + +++ K Sbjct: 437 NAKDAAQVLAKMYEGHLILGSATPSVESYYLAQKEKLQYVFLGERFGDVKLPEFELVNFK 496 Query: 396 GQ----KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + K+ + LI ++ L+ + Q ++ NRRG++ + C CG++ C CD Sbjct: 497 EEQDSKKIIGNFSVKLIDDIKSELERNKQTMILHNRRGYSNVVECESCGYVNYCANCDVV 556 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T H+ + ++CH+C + P+ CP C S +L G+G EQ+ + ++ LFP + R+D Sbjct: 557 MTFHKYSNEMKCHYCGQKASKPKVCPKCHSENLNERGVGVEQIHEEVSRLFPDSEVDRMD 616 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 D+ +K A E+ ++ I++GTQM++KG F ++ LVA+ D L+ DFR+ Sbjct: 617 VDSMRKKFAYEKLYEKIEESETDIVVGTQMISKGLDFDNIELVAIPKADSLLYVQDFRAE 676 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER QL TQV+GRAGR +G+V++QT++P H + Q + + L ERR P Sbjct: 677 ERAYQLITQVSGRAGRTSGEGKVIIQTYNPSHSVFQLIRDNDTASIYAHFLEERRKFLYP 736 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P+ +++ + ++ A Q L +++ + +LGP + K +++QI Sbjct: 737 PFVKLIMIELKHRRDEKASRSAQFLGSVLRKYLPEEC---ILGPEKSPIAKLNLMYQYQI 793 Query: 692 LLQ---HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 +L+ + + ++ +L ++ I + VK ++ VD Sbjct: 794 MLKLPRGKRYLEFKALVLKSLEEMDEITAYQSVKKLIFVD 833 Score = 119 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 8/182 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A + LP+ L TF Y +P+ + ++ G RV V F + GIV + E Sbjct: 22 FAQIILPLNLKGTFTYKVPDEIMPDIEVGMRVLVSFRGNKIYTGIVFEIH-KDEPEGFVP 80 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ +LD P+ R W ++YY G++ A P L+ Sbjct: 81 KEIISILDDFPILPPEQIRFWNWISEYYLCNPGEIYRFAFPASLKLESETYLKLKPNVTV 140 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + V+ L Q + L + E +++L ++ + Sbjct: 141 EFENLDVNEMYLI----QALEVRQLINVTEIEAFIPKKEI-VKTIKSLIDLQYIEIDEKI 195 Query: 181 PE 182 E Sbjct: 196 AE 197 >UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae RepID=Q123Y5_POLSJ Length = 739 Score = 604 bits (1558), Expect = e-171, Method: Composition-based stats. Identities = 266/802 (33%), Positives = 354/802 (44%), Gaps = 140/802 (17%) Query: 2 PVAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 V + P + Y + G VRVP GK+ E +G+V ++ Sbjct: 3 YWIEVVVATPAHSAVAGPLTYR--SEFPLFPGALVRVPLGKR-EVLGVVWNL-------- 51 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 L R I L P+ + A +Y Sbjct: 52 ---------LPDSGGLPEKQIR-----------SIAGALDGLAPLATTWRKLVAFTAGYY 91 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + + ALAAL LR+ LA Sbjct: 92 QRSLGEV----------------ALAALPPQ-------------------LRELSAVQLA 116 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + + + L +Q A+ AD LL G TGSGKTEVYL Sbjct: 117 RRLKRPVLDTSCAPGTADLIALTPQQTKALAEFDGDADA-RPALLFGATGSGKTEVYLRA 175 Query: 238 LENVLAQG--KQALVMVPEIGLTPQTIARFRERFN----APVEVLHSGLNDSERLSAWLK 291 VL Q Q LVMVPEI LTPQ ARF RF V +HSGL ++RL WL Sbjct: 176 AARVLEQDPDAQVLVMVPEINLTPQLQARFEARFAHLGKERVVPMHSGLTPAQRLKGWLA 235 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE--- 348 A G+A +V+GTR A+ NL ++V+DEEHD SYKQQEG RY ARDLAVYRA E Sbjct: 236 AHTGQARLVLGTRMAVLASLPNLRLLVVDEEHDPSYKQQEGARYSARDLAVYRAKLETAE 295 Query: 349 ------QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR----------------- 385 ++LGSATP+LE+ +Y+ L +T R G Sbjct: 296 ARHAHGPCRVLLGSATPSLESWQATLTGRYQRLTMTERIGVPSSIGMEALQFSDGPPLGK 355 Query: 386 -----------------PAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRR 428 + +D+ Q +AP L+ + Q + Q ++FLNRR Sbjct: 356 LAPPGGSELRAASERGGLPLVRRVDMNHQPKHCIIAPPLVEAIAQRVARGEQSLIFLNRR 415 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+AP L CHDCGW +ECP C Y H+ LRCHHC VPR CP CG+ + PVG Sbjct: 416 GYAPVLACHDCGWKSECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPDCGNIDIAPVG 475 Query: 489 LGTEQLEQTLAPLFPG------------VPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 GTE+LE+ LA L V I+RID D+T KGALE QLA VH +L Sbjct: 476 RGTERLEEHLAELLAHVQRPDDGGVPGPVRIARIDADSTRLKGALESQLASVHAREVDVL 535 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG---RAGKQGE 593 +GTQM+AKGH F +TLVA ++ DGALFS+DFR+ ER L Q GRAG R + E Sbjct: 536 VGTQMIAKGHDFRHITLVAAINPDGALFSSDFRAPERLFSLLMQAGGRAGRDARHSEASE 595 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 + +QT HP+HPL + L Y AFA + LAER + P+ +VRAE + A FL Sbjct: 596 MWVQTFHPDHPLFEALKKHDYPAFAARQLAEREAAGMAPFGFSALVRAEARAQEVAQGFL 655 Query: 654 QQLRNLILSSPL-ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + + +++ VP + R Q+L++ PSR LQ + ++ Sbjct: 656 NAAAASAKAQQVTGHDQVAAYPAVPMTIQRVANIERAQMLVESPSRAALQRFLAAWQPVL 715 Query: 713 NTIPDSRK----VKWVLDVDPI 730 ++W +DVDPI Sbjct: 716 FETRQHSDFKSLIRWAVDVDPI 737 >UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organisms RepID=A1TVM2_ACIAC Length = 763 Score = 604 bits (1557), Expect = e-171, Method: Composition-based stats. Identities = 272/767 (35%), Positives = 366/767 (47%), Gaps = 103/767 (13%) Query: 2 PVAHVALPVPLP----RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + VA+ P Y ++ G VRVP G + E +G+V + Sbjct: 60 AIVSVAVQTPAHSAVGGPLSYA--SAHPLEPGTLVRVPLGTR-EVLGVVWDAPADAP--- 113 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 L AA P+ VL P+ R A A +Y Sbjct: 114 ---------------------ELPRGAAVR---PVAGVLEGLAPLDAAWRRLVAFAARYY 149 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 A + ALAAL L+ L L Sbjct: 150 QRALGEV----------------ALAAL----------------PPQLRDLTPAQLARRL 177 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 P + + E L+ EQ A AI + +LL G TGSGKTEVYL Sbjct: 178 RRAPAATAGEAAPPYAPEPHALSAEQQAATDAIAA---RPGPFLLYGSTGSGKTEVYLRC 234 Query: 238 LENVLAQ--GKQALVMVPEIGLTPQTIARFRERFN-----APVEVLHSGLNDSERLSAWL 290 ++ LA Q LVMVPEI LTPQ ARF RF V LHSG+ +RL +WL Sbjct: 235 VQQALAADPSAQVLVMVPEINLTPQLEARFLARFAPLYGADSVVSLHSGMTHPQRLKSWL 294 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 A G+A IV+GTR A+F L +IV+DEEHD+SYKQQEG RY ARDLA++R + Sbjct: 295 AAHAGQARIVLGTRMAVFASLPGLALIVVDEEHDASYKQQEGARYSARDLAIWRGREQDA 354 Query: 351 PIILGSATPALETLCNVQQ-------KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL 403 +ILGSATP+LE+ + +Y L + R G ++D+ Q A Sbjct: 355 KVILGSATPSLESWHASRPPTDGDPGGRYLRLHMPSRIGAGALPRVRLVDMAQQPRGAVF 414 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 +P L+ + + ++ Q ++ LNRRGFAP L C +CGW ++CP C + H+ LRC Sbjct: 415 SPPLVAAITERVERGEQCLVLLNRRGFAPVLHCTECGWKSDCPHCSAHQVFHKIDRSLRC 474 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPG--------VPISRIDRDTT 515 HHC + VP CP CG+ + P+G GTEQLE+ LA L ++RID DTT Sbjct: 475 HHCGFAQRVPYACPGCGNPDIAPIGRGTEQLEEQLAALLRNVITPERRAARVARIDADTT 534 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 KGALE+QLA+VH G +L+GTQM+AKGH F +TLVA + DGALFS+DFR+ ER Sbjct: 535 KAKGALEEQLAQVHAGEVDVLVGTQMVAKGHDFRRITLVAAVQPDGALFSSDFRAPERLF 594 Query: 576 QLYTQVAGRAGRA-------GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMM 628 L Q AGRAGR G E+ +QT+HP+H + L Y AFA + LAER Sbjct: 595 ALLMQAAGRAGRDAGYVAAQGGACEMWVQTYHPDHAVYAALRRHDYPAFAARQLAERAEA 654 Query: 629 QLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD-EKLWVLGPVPALAPKRGGRW 687 +PP+ +VRA+ + A FL + L E++ V PVP + Sbjct: 655 AMPPFAFQALVRADARTQEVAQTFLAACAEAARQAGLPGLEQVTVFPPVPLAIQRVANVE 714 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTI---PDSRK-VKWVLDVDPI 730 R Q+LL+ PSR LQ + L++ P R V+W++DVDP+ Sbjct: 715 RAQMLLESPSRAALQRFLAAWQPLLHACRADPAHRGLVRWLVDVDPL 761 >UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H5_9FIRM Length = 728 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 202/595 (33%), Positives = 311/595 (52%), Gaps = 22/595 (3%) Query: 13 PRTFDYLL-PEGMT-VKAGCRVRVPFGKQ-QERIGIVVSVSDASELPLNELKAVVEVLDS 69 + + Y + P+ V+ G V VPFG+ + R+G+V++ +E +LK + +V + Sbjct: 17 DKLYTYAVMPDQQDTVRLGSMVLVPFGRGSRARMGVVLAC--DAEPESAKLKFLFDVAPA 74 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALP-------ILLRQGRPAANAPMWYWFATE 122 T + RL+ + + + + +P + G Sbjct: 75 SACLTPELLRLVHFLKERTFCTYYEAVKAVIPYGAQYKPTVAEDGVTPVLQKQLVRHTEN 134 Query: 123 QGQAVDLNSLKRSP--KQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + V K P KQ A+A L G+ + + A L L KG+ + + Sbjct: 135 AYKLVGTLPPKPRPTAKQLAAVALLAGGERTLSALEEKGISRAVLDNLCAKGVLECSKVN 194 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW--LLAGVTGSGKTEVYLSVL 238 D ++ + E + L EQ A A+ + + LL GVTGSGKT V+L ++ Sbjct: 195 KSI-DLYSSIPLKNEPILLTEEQQAAYDALLPGLEDAAPHSALLYGVTGSGKTLVFLKLI 253 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 E+ L G++ALV+VPEI LTPQ I R + +F V V HS LN +ERL W ++G A Sbjct: 254 EHCLQMGRRALVLVPEISLTPQMILRLKSQFGKRVAVQHSALNHTERLLQWQMIQDGGAD 313 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+GTRSA+F+P +N+G+++IDEE + +Y+ + RY A ++A RA ++L SAT Sbjct: 314 IVVGTRSAIFSPLENIGLVIIDEEQEHTYRSESAPRYSAHEVARQRAAENGALLLLASAT 373 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHL 415 P+ E+ Q + +L+RLT+R G ++D++ + ++ A+ +R +L Sbjct: 374 PSTESYYAAQHGRTQLVRLTKRYGGNPLPKVQIVDMRAELASGNPREISLAMEDAIRHNL 433 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR-PVPR 474 +A Q IL LNRRG+ C DC + +C +C H++ H L CH+C SQ P P Sbjct: 434 EAGKQTILLLNRRGYQTVAQCEDCREVLKCQKCSVPMVYHKSAHKLLCHYCGSQMDPPPA 493 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 +CP+CG L G GT++ E+ LA LFP I R+D+DTT+ K A E+ LA+ R Sbjct: 494 RCPACGG-KLQYRGFGTQKAEEELAKLFPEARILRMDQDTTAAKDAHEKLLAKFARHEYD 552 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 I++GTQM+AKG F DVTLV +L +D LF+ FR+ E L TQV GR+GRA Sbjct: 553 IMVGTQMVAKGLDFEDVTLVGVLGIDSLLFAQGFRAYETVFSLVTQVVGRSGRAK 607 >UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=Burkholderiales RepID=A2SC06_METPP Length = 715 Score = 600 bits (1547), Expect = e-170, Method: Composition-based stats. Identities = 263/751 (35%), Positives = 362/751 (48%), Gaps = 90/751 (11%) Query: 3 VAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASE---L 55 V V + P L YL + G +RVP G++ E +G+ + Sbjct: 30 VVPVVIDAPQYSGLKAALGYL--SERPLTPGTLLRVPLGRR-EVLGVAWDTRSGEDSAVP 86 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 L+ V V D ALP L R + Sbjct: 87 DGVTLREVAAVFD------------------------------ALPPLPAAWRELVDFAA 116 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 Y+ + A+ + + L L ++ R L LR K Sbjct: 117 SYYQRSPGEVALAVLPPE--------LRMLSATQLERR-----------LTRLRAK---- 153 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 G + EQA + A+ ++A LL G TGSGKTE+YL Sbjct: 154 ----------LLPPSGAQGALPAPSAEQAQVLQALAASAGDAPVTLLHGSTGSGKTEIYL 203 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKN 294 + V+ G+QALV+VPEI LTPQ RF RF V LHSGL + RL WL Sbjct: 204 REAQRVVEAGRQALVLVPEINLTPQLEERFLARFPGRRVVSLHSGLTPARRLKHWLMVLL 263 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+GTR A+F P LG++++DEEHD SYKQQEG RY ARDLAV R E +P++L Sbjct: 264 GEADLVLGTRLAVFAPLPRLGLVIVDEEHDPSYKQQEGARYSARDLAVVRGRVEGVPVLL 323 Query: 355 GSATPALETLCNVQQ------KKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLA 404 GSATP+LE+ N +Y L + R G ++D+ K + L+ Sbjct: 324 GSATPSLESWHNALPATEGGAGRYTRLTMAARIGGGVLPTVRLVDMSRLPKEVLRDSALS 383 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 PAL+ +R+ L Q ++ LNRRG+AP L C +CGW + C C + H+ LRCH Sbjct: 384 PALLGALRERLARGEQSLVLLNRRGYAPVLHCTECGWKSACAHCSAWRVFHKLDRTLRCH 443 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 HC VPR CP CG+ + P G GTE+LE+ LA PG + RID DTT R GALE + Sbjct: 444 HCGLTERVPRACPDCGNADIQPTGRGTERLEEQLALALPGARVGRIDADTTRRSGALEAE 503 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L+ VH G +L+GTQM+AKGH F +TLVA ++ D ALFS+DFR+ ER L Q AGR Sbjct: 504 LSRVHAGEVDVLVGTQMIAKGHDFRRMTLVAAVNPDAALFSSDFRAPERQFSLLMQAAGR 563 Query: 585 AGRA---GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRA + E+ +QT HP+H L L Y AFA+ LAERR LPP+T ++RA Sbjct: 564 AGRAAEQADRAEMWVQTWHPQHALYAALRTHDYAAFAQAQLAERRAAGLPPYTHLALLRA 623 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + A +L+ + + ++ + PVP + R Q+L++ SR L Sbjct: 624 DAREQSVAQAWLRVVSDEARE-LAEQHQVALYPPVPLSVQRVADMERAQLLVESASRPAL 682 Query: 702 QHIINGTLALINTIPDSRK--VKWVLDVDPI 730 Q + A + +K ++W +DVDP+ Sbjct: 683 QRFLTAWDATLRRKRPEQKGLLRWAVDVDPL 713 >UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIQ4_9FLAO Length = 815 Score = 599 bits (1545), Expect = e-169, Method: Composition-based stats. Identities = 191/684 (27%), Positives = 328/684 (47%), Gaps = 40/684 (5%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ ++S + + A+ Y + + A + Sbjct: 155 KDIIRTINS--LIDLQYIEIDEKIAEKY-----------------KAKEVAYVRINDEVL 195 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIW--------RDQVATLEFNDAALQALRKKG 172 Q L L R+ KQ+ + + + + F + + L KG Sbjct: 196 ANQNLTEILLKLNRAQKQKDLFLLILEKQTENPDTPIKKSELFEDGYFGSSHFKPLADKG 255 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 L + + + E L +Q TA I A + LL GVT SGKT Sbjct: 256 LVEEYYMQKDRIESYEGEIEELEELS--EQQKTAKSEIDEAFEEGKNVLLHGVTSSGKTH 313 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 +YL ++ + +GK L ++PEI LT Q R +++ + H L D ER+ W + Sbjct: 314 IYLEKIDECIKEGKNVLFLLPEISLTKQITQRLEKKYGRQLGFYHQKLTDFERVEVWRRI 373 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIP 351 K + I+IGTR+ALF P++NLG+IV+DEEHDS+Y+ +E ++A+D ++ + Sbjct: 374 KQNDIRILIGTRNALFLPYQNLGLIVVDEEHDSAYRPREVSPYFNAKDASLVLGKFYKAG 433 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG----QKVQAGLAPAL 407 +ILGSATP++E+ + ++ K + + L R GN +++ K +KV + L Sbjct: 434 VILGSATPSVESYYSARKDKMKYVFLNERFGNVNLPEYELINFKEAQESKKVSGNFSLKL 493 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I ++ + A NQ I+ NRRG++ + C CG++ C CD T H+A + ++CH+C Sbjct: 494 IEDIKTTVDAKNQAIVLHNRRGYSNVIECESCGYVNYCSNCDVVMTYHKAANEMKCHYCG 553 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + P+ CP C S L G+G EQ+ + ++ LFP + R+D D+ +K A E+ + Sbjct: 554 QRASKPKTCPKCNSEKLNERGVGVEQIHEEVSKLFPENEVDRMDVDSMRKKFAYEKLYEK 613 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + G I++GTQM++KG F + LVA+ D L+ DFR+ ER QL TQV+GRAGR Sbjct: 614 IEDGETDIIVGTQMISKGLDFDHIELVAIPKADSLLYVQDFRAEERAYQLITQVSGRAGR 673 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +G++++QT +P+H + Q + + L ER+ PP+T +++ + Sbjct: 674 VSGKGKILIQTFNPDHSVFQLIKMNNPAKIYKYILTERQKFHYPPFTKLIMIELKHRRED 733 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHI 704 A Q L +++ D VLGP A K +++QI+L+ + + + + Sbjct: 734 KADRASQFLGSILRKYLPEDC---VLGPERAQIAKLNNLYQFQIMLKLPRGKTYEKFKSM 790 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 + +L + I + +K + VD Sbjct: 791 VLISLKEFDEITAYQSIKKDVFVD 814 Score = 135 bits (340), Expect = 8e-30, Method: Composition-based stats. Identities = 42/225 (18%), Positives = 81/225 (36%), Gaps = 9/225 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A + LP+ L +F Y +PE M ++ G RV VPFG ++ GIV + D + Sbjct: 1 MQYAQIVLPLNLKGSFTYKVPEEMMPEIQPGMRVLVPFGGKKIYTGIVFELHDHAPENFV 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K ++ +LD +P+ W ++YY +G++ + P L+ Sbjct: 61 -AKEIISMLDDQPILPQEQIDFWNWLSEYYLCNLGEIYRFSFPSSLKLESETYLKLKAGA 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + V+ L Q + L + + + +L ++ Sbjct: 120 IVDFENLDVNEMYLI----QALEVRQLINLTDIEAFIPKKDIIR-TINSLIDLQYIEIDE 174 Query: 179 ETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 + E + Y + + N + ++ A +LL Sbjct: 175 KIAEKYKAKEVAYVRINDEVLANQNLTEILLKLNRAQKQKDLFLL 219 >UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugamushi RepID=A5CFA8_ORITB Length = 646 Score = 596 bits (1538), Expect = e-169, Method: Composition-based stats. Identities = 199/569 (34%), Positives = 309/569 (54%), Gaps = 13/569 (2%) Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 A L + K L +E P ++ + + L L+ EQ A AI A LL Sbjct: 85 ADLGTVAKMTLPIELNEKPYVAESQEVNHSLFQLLDLSPEQQLAFDAIRKTTG---ATLL 141 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 G+TGSGKTE+Y ++ L QG Q L+++PEI L RF RF + +S ++ Sbjct: 142 QGITGSGKTEIYFHLIAEALRQGLQVLLLMPEINLAGHIAFRFASRFKFNAVIWNSSVSK 201 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 S + E +VIGTRS++F P+ +LG+I++DEEHD SYKQ+ Y+ARD+AV Sbjct: 202 SLKKKTLRGILTNEIKVVIGTRSSIFLPYSSLGLIIVDEEHDQSYKQENNILYNARDMAV 261 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 R H IP+IL SATP+LE++ N KKY L++L R G++ +++D+K + + G Sbjct: 262 MRGHIANIPVILASATPSLESIYNTYNKKYSLVKLKSRFGSSTLPNINIIDMKKEHLPNG 321 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 L+ +L M Q L+ + Q++LFLNR+G+AP +LC +CG+ C C H++++ Sbjct: 322 MWLSTSLKNAMEQTLKLNKQILLFLNRKGYAPIILCRNCGFRFMCSSCSSCLVFHKSKNK 381 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L+CHHC S +P + CP C L G G E++ + + FP + + RDTT+ Sbjct: 382 LQCHHCGSFKPFAQSCPECNEQTLSAYGPGIERIAEEVKVYFPKYKTAIVSRDTTNTIDN 441 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 + L ++ I+IGTQML KG+HFP++ LV ++D D + D R+ E+ QL Q Sbjct: 442 STEILQQIINNEVDIIIGTQMLTKGYHFPNLKLVGIIDADLG-YGGDLRANEKTYQLLNQ 500 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 VAGRAGR +G V +QT++P+ LL+ L+ D F + R +PP T V + Sbjct: 501 VAGRAGREEDKGYVYIQTYYPDSSLLKYLINYKDDDFINYEMNLRISNNMPPATRFVAIS 560 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 + Q+A Q++ I+ + L +LGP PAL K ++R++ILL ++ Sbjct: 561 VISTSEQNA----QEVAKNIVRTAKPCSSLRILGPAPALLYKLKNKYRFRILLIFERKLD 616 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDP 729 ++ I L S++V +D+DP Sbjct: 617 IRSYIKHWNIL---SFHSKRVSLKIDIDP 642 Score = 57.6 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 12/130 (9%) Query: 18 YLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSV 77 Y + + G V VPF + ++ GIV V+ + +K ++ Sbjct: 17 YKSTTHL-LSIGDLVVVPF-RNKQITGIVCEVNIIPQH--KNIKEIIAKQFQGYSIKPIN 72 Query: 78 WRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPK 137 + + A YY +G V LPI L + Y +++ L SP+ Sbjct: 73 LKFIDIVARYYIADLGTVAKMTLPIELNEK--------PYVAESQEVNHSLFQLLDLSPE 124 Query: 138 QQQALAALRQ 147 QQ A A+R+ Sbjct: 125 QQLAFDAIRK 134 >UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PRIA_TREPA Length = 657 Score = 595 bits (1535), Expect = e-168, Method: Composition-based stats. Identities = 193/538 (35%), Positives = 281/538 (52%), Gaps = 9/538 (1%) Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 + L+ EQ A+ AI ++ S + + GVTGSGKTEV+L E VLA+GK + +VP Sbjct: 127 TDTYALSGEQRKAIDAITASTGARS-FYVHGVTGSGKTEVFLRAAEAVLARGKSVIYLVP 185 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI LT Q + RF + VLHS L+ S+RL W + + +VIG RSA+F P K Sbjct: 186 EIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQCMRHCVVIGARSAIFAPLKR 245 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 LG++++DEEHDSSYK RYHAR +A+YR P ++GSATP++E + + R Sbjct: 246 LGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCADANCPFVMGSATPSVEAWYAMLRGAVR 305 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPA 433 L LT R P V+D+ + + L+ L+ +R+ +A Q +LFLNRRGF+ + Sbjct: 306 RLPLTARVAGGAPPRVEVVDVSKEALL--LSTRLVDEIRKTKEAGYQSMLFLNRRGFSYS 363 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 C CG+ C +C T H+ ++CH+C Q P CP C S G+GTE Sbjct: 364 FQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPESCPCCHSFDTRYGGVGTEY 423 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 +E+ + LFP I+R+D D G ++Q + + G +L+GTQM+AKG +FP + L Sbjct: 424 IEEAVQALFPEYRIARVDTDALRS-GHVQQTMEQFRAGKIDVLLGTQMIAKGFNFPTLRL 482 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 V + D L + DFR+AER L QVAGRAGR G V++QT +P HP + + Sbjct: 483 VGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQHGD 542 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 ++F Q LA+R + PP+ + + A L+ + VL Sbjct: 543 CESFYAQELAQREALCFPPFVRLIRFVFRSKTRRKAKDAAYAAHALLTAQMPLGAD--VL 600 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 GP + + G +R QILL+ PS +Q + L V DVDP+ Sbjct: 601 GPAACVVAQVAGSYRMQILLRAPSFPVVQQVARSFLDEFRA---PAGVYVESDVDPVN 655 >UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGK8_9BACT Length = 648 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 180/561 (32%), Positives = 278/561 (49%), Gaps = 11/561 (1%) Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA-DTFSAWLLAGVTGSG 229 KG+ T E + + + L LN Q + I+S+ D FS L+ GVTGSG Sbjct: 93 KGVISEQVYTSEKTTVEIKHF-EPKELTLNEAQLSVYNGIYSSLKDGFSTHLVHGVTGSG 151 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTE+++ + + V+A+GKQ L +VPEI LTPQ R R V HS +R A+ Sbjct: 152 KTEIFIELAKKVIAEGKQVLYLVPEISLTPQLENRLSARMGFDVLSYHSKKTPKKRKEAF 211 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 G +++G RS+LF P K +G+I++DEEH+SSYKQ E Y RD++V + Sbjct: 212 WSFSAGTLPMMLGARSSLFVPAKEIGLIIVDEEHESSYKQDEIPSYQLRDMSVLYGKILK 271 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL-APALI 408 IP+IL SATP+LE+ N + KY + R P IQ ++D+K ++ G+ + L Sbjct: 272 IPVILASATPSLESWANAKSGKYLYHSIPCRPDTDMPEIQ-IVDMKEEEPIGGILSIPLY 330 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + + QVIL +NR+G++ L C CG I C C T +++ + +C++C Sbjct: 331 DAIYETINRGEQVILLINRKGYSHTLYCRKCGNIINCSNCSVAVTYYKSTNTCKCNYCSQ 390 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + P+ C CGS + G GTE++ + L F I R+D + L + L Sbjct: 391 EVRRPK-CLHCGSDDITDYGAGTEKVAEVLETAF-EKKILRLDTENVKSYKKLSEMLKSF 448 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G I+ GTQ++AKG F +VTL ++++D DFR+ ER QL Q+AGRAGRA Sbjct: 449 EDGEYPIMAGTQLVAKGLDFGNVTLAGIINIDNMFTLPDFRANERAYQLLLQLAGRAGRA 508 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K+G VV+QT PE L + L F E +A R++ PP+ + + Sbjct: 509 DKKGRVVIQTAMPELDLFKRLDCLD-TTFYEMEMARRKLFNYPPFYKMCRITLSHTKEEA 567 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 + + +L V P A K R+R+ I+++ P L +I Sbjct: 568 VKDAAFLVYDTLLRFK---NDAEVFYPAQAPIYKIQNRFRYGIIIKSPLNSELSKLIRAA 624 Query: 709 LALINTIPDSRKVKWVLDVDP 729 + + ++ +D DP Sbjct: 625 ANTLKDNAKTT-LRIKIDRDP 644 Score = 81.4 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M V LPVP + Y + ++ G R VP G++ GIV+ + A + + + Sbjct: 1 MKYYDVILPVPTGGIYTYTSEDE--IQNGVRATVPLGRR-TLTGIVLRENTAPDESI-KY 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL 100 + + V D+ P+F+ L++ ++YY G VL + Sbjct: 57 RNISTVHDTNPIFSCEYMDLIMKISEYYCAGAGQVLKGVI 96 >UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B0S8N3_LEPBA Length = 650 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 199/655 (30%), Positives = 300/655 (45%), Gaps = 21/655 (3%) Query: 81 LLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQ 140 L W + + I + + AL +R P + +L Sbjct: 11 LSWESKTLTYEIPNSI-TALQPGVRVLVPLNGKEWDGVVIQIHNNEPNYETLS------- 62 Query: 141 ALAALRQGKIWRDQVATLE--FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERL- 197 L + + + L ++ L +L + + + V L Sbjct: 63 VLKQIDPEPVITTEQLELATWMSENYLSSLGEALFLMVPKGKKRKLTKEVDTEVQSHLLH 122 Query: 198 RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK-QALVMVPEIG 256 LN Q A I + LL G+TGSGKTEVYL ++ ++L + K + +VPEI Sbjct: 123 PLNEAQKKAYTEIKQNTHA-NTHLLYGITGSGKTEVYLHLMRDILQEPKGSVIFLVPEIS 181 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 LT TIAR F V VLHS L SE+ +L K G+ I IGTRSA+F P +L + Sbjct: 182 LTYPTIARIEAIFPNQVAVLHSHLRISEKFQNYLDLKEGKKRICIGTRSAIFAPLSDLKL 241 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 +V+DEEHD+SYK+ RYHAR +A+ R ++LGSATP++E + + Sbjct: 242 VVMDEEHDASYKENGSPRYHARQVALQRILKTGGKLLLGSATPSIELYYLAKSGQIGFSI 301 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 L +RA N + + V Q + ++ L ++ L+ Q+IL LNRRG+ P + Sbjct: 302 LEQRA-NPKAKLPFVEMSDKQDDKHLISGDLQFKISDRLKKKEQIILLLNRRGYNPFIFS 360 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CP+C H Q +RCH C + G L G GT++LE+ Sbjct: 361 PQTKEFVHCPKCTATLCYHSDQ-TVRCHLCGYHSNFYNLKQTFG-EDLELFGAGTQKLEE 418 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L FP I R+D+D++ K L ++ G IL GTQM++KG + +VTLV + Sbjct: 419 YLLSHFPSARIERLDQDSSKNKDVTRLVLEKLGEGELDILTGTQMISKGLDYANVTLVGI 478 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 L+ + L DFRS+ER L +QVAGRAGR K GEV++Q++ PEHP+L+ + Y A Sbjct: 479 LNANHGLGVPDFRSSERTYALVSQVAGRAGRGEKPGEVIIQSNDPEHPVLKMAKEQNYPA 538 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F E L R+ + PP+ + + A LI ++ + +LGP Sbjct: 539 FFEWELQFRKDLFYPPFARLARLVFRSKYEEVANKQSVVYGELIKEKK--EDSIVMLGPS 596 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 K +R+ ILL+ S L++++ T T K D+DP+E Sbjct: 597 QCPFYKIDNNYRYHILLKAKSITALRNLLKETK---QTFKLDSKCYIEYDLDPME 648 >UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX29_STRM9 Length = 643 Score = 582 bits (1500), Expect = e-164, Method: Composition-based stats. Identities = 170/537 (31%), Positives = 295/537 (54%), Gaps = 12/537 (2%) Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 + LN Q A I ++ + + +LL G+T SGKTE+Y+ ++E L + K ++ ++P Sbjct: 116 KNNITLNEYQQKAYEDIVNSDE--NIFLLHGITSSGKTEIYIKLIEEALKKDKSSIFLLP 173 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI L+ Q + ++ F + + ++HS + + +L W+ +G + +++G RSALF P KN Sbjct: 174 EISLSSQMVKVIKKVFGSSISLIHSKMTPATKLKEWINIYSGNSKVILGARSALFAPVKN 233 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 LG I+IDEEH++SYKQ++ RYH+R++A+ RA E +ILGSATP+ E+ ++ ++ Sbjct: 234 LGYIIIDEEHENSYKQEDNARYHSRNVAIKRAMQEGAKVILGSATPSFESYYLAKKNLFK 293 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPA 433 L+ L +R N V+DL +K L+ L+ M+ L QVIL LNR+ + Sbjct: 294 LITLNKRFNNMELPEMEVVDLSNEKSM--LSEKLLQNMKTVLSKGEQVILILNRKLHSLL 351 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 + C +C CPRC ++++ L C HC+ +R + CP C S +L +G+G E+ Sbjct: 352 VRCIECKEKMICPRCSVNLRYSKSKNILECSHCEYRRKMYETCPYCESKNLELLGIGIEK 411 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 LE+ L+ LF I R+D T + + ++ E +I IGTQ+LAKG HFP+VTL Sbjct: 412 LEEELSDLFGSENILRMDSSTMTSQKDFDKAYKEFSENKYQIAIGTQILAKGFHFPNVTL 471 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 V +++ D L +DFR E+ QL TQ AGRAGR K+G+V+LQ++ P+ L+ +++ Sbjct: 472 VGIINTDQILSLSDFRVGEKTYQLVTQSAGRAGRGNKKGKVILQSYIPDSKLINSIMSGD 531 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 ++ + E + R+++ LPP++ + + D + A +++ I + + Sbjct: 532 FEGYFEYDMHIRKLLNLPPFSRMIKIIVSDKKEERALKVTKKIHKDISENFAEVSHIE-- 589 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 A K +R+ I ++ ++ L I + + ++D+DP+ Sbjct: 590 ---KAPIFKMNDDFRYNIYIKSDKNEIAKN--RKLLFAIKG-SSNNTTRILVDIDPL 640 >UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND9_FERNB Length = 775 Score = 574 bits (1481), Expect = e-162, Method: Composition-based stats. Identities = 206/770 (26%), Positives = 347/770 (45%), Gaps = 83/770 (10%) Query: 26 VKAGCRVRVPFGKQQERIGIVVSVSDASELPL--------NELKAVVEVLDSEPVFTHSV 77 ++ G RV + K ++ +G V+ + + +E +VE +D S Sbjct: 24 IEIGERVLLQ-HKGKKVLGYVIGNQEWAPCDEFLPNQKSSSEYSKIVERMDYISFLEKSR 82 Query: 78 WRLLLWAADYYHHPIGDVLFHALPILLRQ------------------------------- 106 + L A++Y +G + P Sbjct: 83 VKALYGLANFYFSGLGKYFDISFPNKFDDYFSLFVESVSPFVNIEKMPYEEFKKIKNYKE 142 Query: 107 ------GRPAANAPMWYWFATEQGQAVDLN-------SLKRSPKQQQALAALR-QGKIWR 152 + + ++G+ V L LK + Q + L +G Sbjct: 143 YINNGLVKVYRDFETKKPRPRKRGECVYLKISSIELSKLKLTVSQSTVVNYLLFKGPTEV 202 Query: 153 DQVAT-LEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIH 211 +Q+ L+ + L+ KG+ ++ + +F + +R+ L+ EQ + V I Sbjct: 203 EQIIEDLDVKKDVVVQLKNKGIIEILEQCSDFETLN----IKPQRVILSDEQKSIVDKIL 258 Query: 212 S-AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN 270 S L+ G TGSGKTEVYL V+E L G L +VPE+ LT QTIAR R+RF Sbjct: 259 SYDFRKEKKHLVFGPTGSGKTEVYLEVIEKYLPFG-NVLYLVPEVSLTEQTIARLRKRFP 317 Query: 271 A-PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ 329 + V HS L +S+R+ W KA GE I++G RSA F P KNL + ++DEEHD Y Sbjct: 318 DLSIAVYHSYLTESKRVEIWAKAVKGEINILVGPRSAAFVPLKNLNLAIVDEEHDEGYYN 377 Query: 330 QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQ 389 Y ++ I ++ GSATP+LE+ + +Y +LT+R P ++ Sbjct: 378 NSEPFYEIHTF----LNALPITVVYGSATPSLESYKKAKDGEYVFHKLTKRYNVELPEVE 433 Query: 390 HVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 V K +KV ++ L + + L+AD I+F R+GF+ + C CG+I +C CD Sbjct: 434 IVDMNKTKKVTFSISEILYNNLSKVLEADKSAIIFTRRKGFSR-VQCAVCGYIVKCEHCD 492 Query: 450 HYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISR 509 T H ++L+CH C S++ + CP+CGS + G G+E++E+ L LFP I R Sbjct: 493 VAMTYHLDSNNLKCHICGSEKELSLNCPNCGSNMFIDRGTGSEKVEKELQQLFPSRNIGR 552 Query: 510 IDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFR 569 ID + L++ L + G I+ GT+M+ KG + L+ ++DVD + D Sbjct: 553 IDAEIADTPEKLKKLLDYLREGKIDIVAGTKMITKGLDIYRIALIGVVDVDALISYPDIN 612 Query: 570 SAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQ 629 + R QL QV GRAGR K G+ ++QT+ P P++ + + F E+ L R+ + Sbjct: 613 APLRTFQLLVQVIGRAGRNEK-GKAIIQTYKPTDPVITFASNQDVEGFYERELEIRKQLN 671 Query: 630 LPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL--------WVLGPVPALAP 681 PP+ S V++ + N + A + + + I + ++K+ +LGP Sbjct: 672 YPPFASVVVLTYANLNQEIARETIDTVADEIENIEKKEKKVQEVYKYYLELLGPSEHPIF 731 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 K ++R+QI + + L ++ ++ + +W++ V+P E Sbjct: 732 KANNKYRYQIFFKTNNVPELVRLLKKIISNYSG-------EWIIKVNPNE 774 >UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YQC1_AZOPC Length = 664 Score = 574 bits (1480), Expect = e-162, Method: Composition-based stats. Identities = 209/741 (28%), Positives = 334/741 (45%), Gaps = 88/741 (11%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG--IVVSVSDASELPLN 58 M + V LP+PL TF Y +P M + IG +VV + ++ Sbjct: 1 MYI-EVILPLPLNGTFTYFVPTEMESQI-------------MIGSLVVVGFGEYNK---- 42 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 YH + + LP + + Sbjct: 43 -----------------------------YHRGLVLCIEQILPSTINVEKIKP------I 67 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + E + S R + G +++ + + Sbjct: 68 LSVESSRPAIRQSQLRFWQWISNYYLCTLGNVFKTALPSS--------------FHMKEK 113 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 ++ ++ +LN Q I LL G+ E+Y+ ++ Sbjct: 114 QSERCKIIPQPFS------KLNELQKKIFDQIVENFQKKDVCLLHKNISLGEIEIYIHLI 167 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN-GEA 297 E L Q +Q L ++PEI LT Q ++ F ++V HS +N ++R+ W + + Sbjct: 168 ERTLKQNRQVLYLLPEIALTRQITNHLKQFFGEQLDVYHSKVNLNKRMEIWNNLLSDKQY 227 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGS 356 I++G S++F PFKNLG+I+IDEEHDSSYKQQ+ YHAR+ A+ A +ILGS Sbjct: 228 QIILGVHSSIFLPFKNLGLIIIDEEHDSSYKQQKIAPYYHARNAAIVLATIHNSKVILGS 287 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMR 412 ATP++E+ NVQ KY + +P +D+ + +K++ +P LI M+ Sbjct: 288 ATPSIESFYNVQIDKYSYINSNEYLKKTKPLPIISIDVKELKRKRKMKTIFSPLLIEHMK 347 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 Q L+ QVILF NRRGFAP + C C W +C CD T H+ L CH+C + Sbjct: 348 QKLKNGEQVILFQNRRGFAPCIFCKACNWTPKCHFCDINLTYHKESDRLTCHYCGRNYLL 407 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P +C CG+ +L +G GTE++E+ + LFPG ++R+D DTT K +L++ ++ G Sbjct: 408 PNKCFRCGNLNLQSIGYGTEKVEEEVQVLFPGASVARMDLDTTKVKKSLKKTISNFESGQ 467 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 +ILIGTQ++ KG + V L+ +LDVD + DFR+ ER QL Q+ + R QG Sbjct: 468 IQILIGTQIIYKGLNINKVGLIGILDVDTLMNFPDFRAYERTYQLILQMVEKVKRQRTQG 527 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 E++LQT HP HPL++ +L + Y + + ER + + PP++ + + + Sbjct: 528 ELILQTSHPNHPLIKIVLQQNYKGMYDMQIEERILFKYPPFSRLIHILLYHKREELLCKV 587 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHIINGTL 709 + +L L D V+G + K G + +ILL+ + S + L+ I+ G Sbjct: 588 SDK-YVHLLQEKLGD---RVVGHDKPIVGKIKGLYIRKILLKIEVNASSIALRKILEGIH 643 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 I R+V DVDPI Sbjct: 644 TKILKTAGLRRVIIHYDVDPI 664 >UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL78_FIBSS Length = 672 Score = 572 bits (1476), Expect = e-161, Method: Composition-based stats. Identities = 222/729 (30%), Positives = 339/729 (46%), Gaps = 75/729 (10%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V +P+ P F Y +PEG ++ G V V +++ + +V V K Sbjct: 13 RFCEVYIPLS-PSVFTYGVPEGADIQRGSVVWVQLARRKPTLALVSRVHSE--------K 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 +V + P + V+ ++ Y + V + + +R +W A Sbjct: 64 PSFDVRYACPHESGYVF------SERYMESLEWVSKYYISSPMR-------TLNVFWPAD 110 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 D L AL L + + Sbjct: 111 F---------------------------------------DKFLDAL----LAEKSEPRG 127 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLE 239 E V + L EQ TA+ ++ D F LL GVTGSGKT VY ++ Sbjct: 128 EAPSNGPEMEVCSDLPPLTGEQETALASLVEDLDKDGFRGTLLHGVTGSGKTRVYQELVR 187 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L + K+ L++VPEIGLTPQT +RF + PV VLHS L+ ++ + +L +G A + Sbjct: 188 EALKRNKRVLILVPEIGLTPQTASRFEDYLKVPVVVLHSALSAPQKRAGYLAVLDGSAKV 247 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSAT 358 V+GTRSA+ +PF + V+++DEEHDSS+KQQ+ RYH RDLA + A ++LGSAT Sbjct: 248 VLGTRSAILSPF-DFDVVILDEEHDSSFKQQDPAPRYHTRDLAFHLAQKYGALVVLGSAT 306 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQ 416 P LET N + +LL L RA A V+D+ + Q G ++PAL + + Sbjct: 307 PCLETFRNAKAGNLKLLTLKNRATAAPLPEVKVIDMGKVRQQKGVLMSPALREALSDCIA 366 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 +Q I+ +NRRG++ +C CG C C H+ + L CH+C + PV C Sbjct: 367 GGDQAIILMNRRGYSKIRVCTKCGETLYCKHCHIPLVYHKQYNALMCHYCAALYPVDTPC 426 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P+CG+ VG E+LE+ + + R+DRDTT GA+E+ L IL Sbjct: 427 PTCGAETYEFVGGAIEKLEEEIHEWVADAKVIRMDRDTTQNVGAVEKILTSFRNREYNIL 486 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKGH FP V LV ++ D L DFRS ER QL +Q AGRAGRAG G V + Sbjct: 487 LGTQMVAKGHDFPGVKLVGIVGADSGLGIPDFRSTERLYQLLSQTAGRAGRAGSGGRVFI 546 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT +P P++Q + +D FAE + R+M PP+ V + + + +L Sbjct: 547 QTLNPTEPVMQYAIRHDFDGFAETESSNRQMAFYPPFCKLVEISCGSRDENLLRDTVNRL 606 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 +++ + + VLGPV A PK + ++ ++ + ++ ++ L Sbjct: 607 ESILRK----ESSMTVLGPVDAFVPKVQNVFWVKLYIKTQNLAAVRKVLAPILNAPKAWV 662 Query: 717 DSRKVKWVL 725 ++K L Sbjct: 663 AGVEIKVEL 671 >UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagibacter RepID=B6BRY0_9RICK Length = 651 Score = 569 bits (1468), Expect = e-160, Method: Composition-based stats. Identities = 184/542 (33%), Positives = 293/542 (54%), Gaps = 10/542 (1%) Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 + + L+ EQ ++ ++ + F +L G TGSGKT VY L+ ++ +G Q L++ Sbjct: 116 IKTNAIELSEEQKKSLRKMNVSNQKFRVHVLQGTTGSGKTMVYFEALKAIINKGFQGLIL 175 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 +PEIGLT Q +F+E F V HSG+ ++ W NGE +VIG RS+LF PF Sbjct: 176 LPEIGLTGQFEKKFKEFFGFTPAVWHSGITKKKKEIIWSGITNGEIKVVIGARSSLFLPF 235 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 K LG+I++DEEHD SYKQ EG Y+ARD+A+ RA E IPI L +A P++ET N+++ K Sbjct: 236 KKLGLIIVDEEHDQSYKQDEGVTYNARDMAISRASFENIPINLITAVPSIETYENIKKGK 295 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKV--QAGLAPALITRMRQHLQADNQVILFLNRRG 429 + + +L +R NA +++L K+ Q+ L+ +I ++ HL ++QV+ FLNRRG Sbjct: 296 FTISKLEKRYKNASLPNYEIINLNETKLEKQSWLSKKIIEKVNFHLDKNDQVLFFLNRRG 355 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGL 489 F+P +LC+ C CP C H+ +++L CH+C + + R C G + G Sbjct: 356 FSPHVLCNKCFNSYSCPNCSINLVYHKKKNNLLCHYCGFKSSLKRTCVKEGDCEFIFSGP 415 Query: 490 GTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFP 549 G E++ + + FP I DT ++K + ++ L ++ +IL+GTQ+++KG HFP Sbjct: 416 GVERISEEVKKNFPSKKIEIFSSDTMNKKSSSDK-LEKIIDNEVQILVGTQLISKGFHFP 474 Query: 550 DVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL 609 + + ++D+D + D R AE+ QLY Q++GRAGR GK V QT++ ++ L Sbjct: 475 SLNCIVVVDIDLSSQGHDLRGAEKNLQLYHQLSGRAGRTGKPATVYFQTYNTNTKMISDL 534 Query: 610 LYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEK 669 D F ++ L RR LPP+ + + N +N I Sbjct: 535 TNSNPDIFLDRELDIRRQNNLPPFQRFISLILTGDNEARLEKEAFYFKNFIEKKIKG--- 591 Query: 670 LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 VLGPV A + ++R ++L++ + LQ+ I +A S +K +DVDP Sbjct: 592 -RVLGPVSAPIFRLKKKFRIRMLIRGSKSLNLQNSIAKIIA---NYKFSSGIKLSVDVDP 647 Query: 730 IE 731 I Sbjct: 648 IN 649 Score = 75.3 bits (184), Expect = 9e-12, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 15/179 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M V + LP F Y + +K G V VPFGK + G+V + ++ Sbjct: 1 MKV-PILLPNIFNHPFTYE--SNLDLKIGDYVVVPFGKSK-ITGVVWDEFEKKNNRHFKI 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K+V++ LD P + + L W ++Y P G L L + +A + Sbjct: 57 KSVLKKLDVVP-LKKTTIKFLNWFSEYNIIPKGMALKLVLLSSNAIEKIQKDAYKIFESN 115 Query: 121 TEQGQAVDLNSLKRSPK------QQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + K+S + Q+ + L+ + E AL+A+ KG Sbjct: 116 IKTNAIELSEEQKKSLRKMNVSNQKFRVHVLQGTTGSGKTMVYFE----ALKAIINKGF 170 >UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae RepID=Q5FEP8_EHRRW Length = 664 Score = 562 bits (1450), Expect = e-158, Method: Composition-based stats. Identities = 195/541 (36%), Positives = 306/541 (56%), Gaps = 16/541 (2%) Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG--KQALVMVP 253 ++ L+ Q A I ++S LL G TGSGKTEVY V+ ++ + Q LV++P Sbjct: 133 KINLSDVQKQAYNNIIGKISSYSVILLDGETGSGKTEVYCEVIRELVTRDNTAQVLVLLP 192 Query: 254 EIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 EI LT Q I R + F V HS L R WL G+++IVIG RSALF PFK Sbjct: 193 EIVLTLQLIKRIKYYFENYFPVEWHSNLTVKSRREYWLSIAYGQSSIVIGARSALFLPFK 252 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NL +I++DEEHD+S+KQ G Y+ARD+++ A IP+IL SATP+LET+ N+Q+ +Y Sbjct: 253 NLKMIIVDEEHDASFKQDYGVIYNARDMSIVLAKQFNIPVILSSATPSLETISNIQKSQY 312 Query: 373 RLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 +RLT+R G+A+ ++DL K + V L+ L + M + LQ +QV+LFLNRRG+A Sbjct: 313 YHVRLTQRFGDAKLPTVKIIDLCKSKMVNRWLSYDLYSSMLKVLQRQDQVMLFLNRRGYA 372 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC-GSTHLVPVGLG 490 LC CG+ +C C + H+ ++ L CH+C + +C +C + ++ G+G Sbjct: 373 TLRLCKTCGFKVQCKNCATWLIEHKRRNVLLCHYCGYSCTIVDECYNCLDKSSVISYGIG 432 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 E++ + + L P I+ I D +S++ + L + + I+IGTQ++AKGH+FP Sbjct: 433 VEKVAEDIMTLIPDAKIAIISSDISSKEIGVTIDL--IMQNKVNIIIGTQVIAKGHNFPK 490 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 +TLV ++D D L ++D R+ ER QL QVAGR+GR + EV+LQT+ + L+++L Sbjct: 491 LTLVGVIDADLGLNNSDLRATERTYQLLHQVAGRSGRFVDRSEVILQTYDANNALIKSLS 550 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + F + L R + Q+PP+T + + N +Q+ + ++ L Sbjct: 551 SYNRELFYDLELKSRLLTQMPPYTRLIGIIVTGKNEAKVINVSKQIVKSLPTT------L 604 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 VLGP PA ++R++IL++ + V +Q ++ + KVK ++DVDPI Sbjct: 605 TVLGPAPAPISLLNRQYRYRILIKVQNNVVIQKLLTRYKEYY---ASTGKVKIIIDVDPI 661 Query: 731 E 731 Sbjct: 662 N 662 Score = 83.7 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD----ASELPLN 58 +A V LPVP+ +TF Y +P G V VPFG + +GIV+++SD E+ ++ Sbjct: 7 IAEVLLPVPVNKTFFYNIPYNENFIVGDYVIVPFGSRL-IVGIVLAISDSIPSTCEVNIS 65 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL 100 +LK V S P ++ + W +DY P G +L Sbjct: 66 QLKMV-NCKGSLPGICSALIHFIKWVSDYNVVPAGLILKMVF 106 >UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospirillum sp. Group II RepID=A3EQU2_9BACT Length = 661 Score = 554 bits (1429), Expect = e-156, Method: Composition-based stats. Identities = 223/726 (30%), Positives = 331/726 (45%), Gaps = 83/726 (11%) Query: 7 ALPVP-LPRTF-DYLLPE-GMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 +P+ LP F Y E T G RVR+P GK+ E +G + + + S LK V Sbjct: 6 IVPMTGLPEPFLTYSWTETDRTPIPGTRVRIPLGKR-EIVGFIWNATPPSPQKKLTLKPV 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +E+LDS PV LP L P W++ Sbjct: 65 LEILDSYPV---------------------------LPPCL---HPIYEFSSWFYRLP-- 92 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 L L + + + L + + P Sbjct: 93 ------------------LGLLLRNTLPQPLAKPLPLSSKI--------------QQPAP 120 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIH-SAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 S + + + +Q AD FS +L GVTGSGKT +Y + ++ Sbjct: 121 SPPSR---ATSDLPPMTEDQKQVFLEWEAKQADQFSITVLRGVTGSGKTRLYQEMAKHTF 177 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 ++ +Q L++ PEIGL PQ F + V+HS + +RLS+W+ GE ++V+G Sbjct: 178 SRDRQVLLLTPEIGLVPQLEEAFSGLVP-RMGVIHSQITPMKRLSSWMSILRGEMSLVVG 236 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 RSA F+P +LG+I++DEEHDS+Y+ EG ++ R+LA+ A QIP++LGSATP E Sbjct: 237 PRSAFFSPLTHLGLIIVDEEHDSAYQAWEGLSFNVRNLALKYAQLRQIPVVLGSATPLAE 296 Query: 363 TLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 +L +Y LL L RR G++ P I + +K+ +L+ + Q L+ Q Sbjct: 297 SLYYAGSHRYTLLSLPRRIHGSSLPEITLTAPSRKEKI---FPSSLLGEIDQTLKDGEQT 353 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA-QHHLRCHHCDSQRPVPRQCPSCG 480 ++ LNRRG+AP L C C + C +C LH+ L CH C S+ P C CG Sbjct: 354 VILLNRRGYAPLLQCLTCKNVLMCKKCSVRLVLHKKPTRQLVCHLCASRFNPPDHCSECG 413 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 T L GL T++ E L+ FP + R+D+DT SR+ + A ILIGTQ Sbjct: 414 GTFLSEDGLATQKAEDLLSFHFPNARVIRLDQDTRSREHSSRT---PFSETEADILIGTQ 470 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 M+AKGH F VTL +L++D AL D+RS ER QL Q+AGR GR G V L T Sbjct: 471 MIAKGHDFRRVTLGIVLEMDQALSLPDYRSEERVFQLVLQLAGRVGRHRPGGRVHLVTAK 530 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+ PL Q L D F + L ER+ PP+ ++ + + + L L Sbjct: 531 PDLPLYQYLKNYDQDGFIQHVLRERKAFGYPPFGRIALLTLSSKDEKTLLEIVSSLDRLW 590 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + E + +LGPVPA K +R+Q L++ S ++ I+ + + + Sbjct: 591 RAGHDT-EGVSLLGPVPAPVYKAKLYYRYQYLIKSSSIEKIHSAIDFFQKQLAPVRGA-H 648 Query: 721 VKWVLD 726 V W +D Sbjct: 649 VGWAVD 654 >UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonproteobacteria RepID=A6Q1U1_NITSB Length = 610 Score = 554 bits (1427), Expect = e-156, Method: Composition-based stats. Identities = 184/546 (33%), Positives = 288/546 (52%), Gaps = 36/546 (6%) Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + + + + ++L+ +Q A+ A LL G TGSGKT+VYL+ ++ V+ +G Sbjct: 99 YESGGDIDAKEVKLSAKQQKALQF----AKDKGISLLFGDTGSGKTQVYLAWMKEVVQRG 154 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 K+A+ ++PEI LTPQ + R F V + HS L+ +R + + G+ +V G RS Sbjct: 155 KEAIFLMPEIALTPQMLKRIEAVFGEAVALWHSRLSKKKREETLRRIREGKVKVVAGPRS 214 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF P KNLG+I++DEEHD SYK Q R HARD+AVY + IP++LGSATP++ + Sbjct: 215 ALFLPLKNLGLIIVDEEHDDSYKSQSRPRIHARDIAVYMGKTLNIPVLLGSATPSVSSF- 273 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 K+Y RL + + + D G++ L+ +++ L Q ++FL Sbjct: 274 ----KRYPSFRLKGSYFGGQK--RFIFD-----TSQGVSSQLLGELQKVLDQKKQALIFL 322 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 R L+C +CG +CP CD ++H +H L CH+C+ + +P++CPSCGS+ L Sbjct: 323 PTRAHFKYLICQECGEAVKCPYCDVGMSVHFDEHALECHYCNFKEYIPKKCPSCGSSELS 382 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 LGT Q++ L FP I R D+D S + LE+ + E + IL+GTQML+KG Sbjct: 383 TKRLGTAQIQSELQQHFPYARIERFDKDAVSTQRKLEKLIKEFAQKKIDILVGTQMLSKG 442 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H +PDV L ++D+D L AD+R+ ER L+ Q++GRAGR V++QT + Sbjct: 443 HDYPDVALSVVMDIDYVLAMADYRARERAVSLFVQISGRAGRKESA-NVLVQTKN--EAF 499 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 YD F E LA R+ + PP+T + N + ++Q+ LS Sbjct: 500 FDRYKE--YDLFLEDELALRKDL-YPPFTRLAQLNFAHKNEKKVKEAMEQV----LSCLK 552 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 EK+ ++G P K G++R+ ILL+ S L + I + + Sbjct: 553 GFEKIEIVGYGPNAIEKIAGKYRYHILLRSSSSKAL----------LQAIYVCKNDLCDV 602 Query: 726 DVDPIE 731 D+DP++ Sbjct: 603 DMDPVQ 608 >UniRef50_C3XEQ9 Primosome assembly protein PriA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEQ9_9HELI Length = 695 Score = 552 bits (1423), Expect = e-155, Method: Composition-based stats. Identities = 196/725 (27%), Positives = 324/725 (44%), Gaps = 55/725 (7%) Query: 15 TFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFT 74 Y + + + +V V + + +GI+V + ++E S +T Sbjct: 15 PLTYYTHDEVVLYDIMQVSV---RNKMELGIIVQIVSNQNFEF----EILEAKKSHFSYT 67 Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 + LL + + YY IG P +R ++ + + + + +K Sbjct: 68 QTQRILLPFMSAYYMQSIGITAQVFTPKDMRLESNIHSSGLPNFKLQKNEDLESNHHIKC 127 Query: 135 SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSG 194 KQ + + + A + L T + Sbjct: 128 --KQTFDMESKYDKNLDSKNYALSPVSHPDL--------------TENIESNLPQTEILC 171 Query: 195 ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPE 254 L++ Q I + S L+ G TGSGKTE+Y + L +GKQAL+++PE Sbjct: 172 NLKTLSSNQQ----EIFTECSKRSLSLIFGTTGSGKTEIYFHAIAKTLKEGKQALLLMPE 227 Query: 255 IGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNL 314 I LTPQ R F + HS +++ +NG+ I+ G RSALF PF+NL Sbjct: 228 ISLTPQMQERLNTAFPNLADTWHSKRTATQKQKILQSLQNGKLKIIAGARSALFLPFENL 287 Query: 315 GVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRL 374 G+I++DEEHD SYK Q +YHARDLA++ + I +ILGSATP+ ++ ++ Y L Sbjct: 288 GLIIVDEEHDDSYKSQSNPKYHARDLAIFLSTK-GIQVILGSATPSPKSYYLAKKHNY-L 345 Query: 375 LRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 L L + N+ + + + Q G++ ++ + L+ QVI+FL R L Sbjct: 346 LHLQNKFHNSTQTLHY-----DESEQIGISLHILHAITSTLERGEQVIIFLPTRANFKIL 400 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQL 494 LC C CP C +LH ++ L CH+C+ +PR C +CGS L V +GTE+ Sbjct: 401 LCRTCKQKILCPNCSITLSLHSKKNALVCHYCNFTSQIPRVCNTCGSDMLSGVRMGTEEF 460 Query: 495 EQTLAPLF------PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 ++ L P I+ DRD S + L L + ILIGTQM+AKGH + Sbjct: 461 KKELETALLSHNLTPN--IAIFDRDNVSTQKKLTALLHDFGEQKIDILIGTQMIAKGHDY 518 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P+VTL ++ +D L D+R+ E L QVAGR+GR K G +++QT + L+ Sbjct: 519 PNVTLSVIIGMDYMLQIPDYRAHETSFSLLYQVAGRSGR-KKHGNILVQT--KDFGLINN 575 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 L + Y L ER + PP+ ++R + + A ++ +++ ++ Sbjct: 576 L-WGDYTKVLHYILHERNPL-YPPFCRLALLRFGHSSEKKAHNLAKEFASILHKIQCEND 633 Query: 669 -KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK--WVL 725 ++G A K ++ +QILL+ + + LQ + L ++ +K + Sbjct: 634 YAFEIVGVSEASIFKIKKKYYYQILLRAYNNLTLQKALQHALKY-----ATKDIKNCVDI 688 Query: 726 DVDPI 730 D+DP+ Sbjct: 689 DIDPL 693 >UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID=B9LA69_NAUPA Length = 601 Score = 545 bits (1404), Expect = e-153, Method: Composition-based stats. Identities = 170/534 (31%), Positives = 271/534 (50%), Gaps = 43/534 (8%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 ++L +Q A+ + +L G TGSGKTE+Y+ ++E VL G+Q L ++PEI Sbjct: 108 IKLTDKQQEALKFLKKN----DVSVLFGDTGSGKTEIYIKLIEEVLNDGQQVLFLLPEIA 163 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 +T Q R ++ F + + HS + ++ GE IV G RSALF P +NLG+ Sbjct: 164 ITSQMEKRLQKYFGEALAIWHSKITKKKKQQILSGIAKGEIKIVAGARSALFLPLENLGL 223 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYK ++ +Y+A+DLAVY +ILGSATP + L K+ R Sbjct: 224 IIVDEEHDDSYKSEQTPKYNAKDLAVYFGKIYDAKVILGSATPLISDLY-----KFPHFR 278 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 L N + K + ++ +I +++ ++ + QVI+FL R ++C Sbjct: 279 LKGTFYNTK---------KTRYFRSTFDDFIIQKIKDTIEKNKQVIIFLPTRANFKYMIC 329 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 +CG +C CD ++H+ + L CH+C+ +P C CGS + +GT + + Sbjct: 330 AECGKAVKCKHCDVAMSVHKNKRALVCHYCNYSMHIPSSCEYCGSEEFINERMGTSEFLE 389 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L +FP I + DRD + K +++ L ILIGTQML+KGH +PDV L + Sbjct: 390 VLKGIFPDAVIEKFDRDVITSKSRVDKLLKRFANKEIDILIGTQMLSKGHDYPDVALSIV 449 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 LD+D L SAD+R+ ER L QV GRAGR GEV++QT +PE + Y+ Sbjct: 450 LDIDFVLNSADYRAGERAFALARQVEGRAGRKED-GEVIIQTLNPE------FFDRSYEE 502 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F ++ + R+ + PP+ + + +D + A + + I + P ++G Sbjct: 503 FYDEEIQNRKELGYPPFNRLIKIEFQDKDKIKAKEKMDRFLRCIGNRP------EIVGSG 556 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 A K +R+Q+LL+ + L II + IN + +DVDP+ Sbjct: 557 EAPIFKIKNIFRYQVLLKGKN---LHKIIYPCVN-INEMK--------VDVDPV 598 Score = 52.2 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 28/150 (18%), Positives = 50/150 (33%), Gaps = 24/150 (16%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M +A+ + P TF Y + G V + + ++ G VV Sbjct: 1 MKYYDIAV-INTPNTFTYS--SNFELNPGDVVEIEV-RNRKTTGYVVKEVQKPNFEC--- 53 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ L S F+ +++ + YY PIG+ W Sbjct: 54 KVILSKLYS---FSSKKQKIIDFICKYYFAPIGEAAGLF---------YECKIENVKWKI 101 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKI 150 +K + KQQ+AL L++ + Sbjct: 102 NNVK-----TDIKLTDKQQEALKFLKKNDV 126 >UniRef50_Q7VFX4 Primosomal protein N' n=3 Tax=Helicobacter RepID=Q7VFX4_HELHP Length = 637 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 174/563 (30%), Positives = 280/563 (49%), Gaps = 18/563 (3%) Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 GL E S + ++ E L+ EQ A+ + S + LL G TGSGKT Sbjct: 88 GLFVPQESKSEESANKNLAELTFELKTLSREQNEALKFLLS----HTNPLLFGDTGSGKT 143 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+Y+ ++ + LAQ K L ++PEI LTPQ +R RE F V + HS + +++ L Sbjct: 144 EIYIHLIAHTLAQAKNTLFLMPEIALTPQIESRLREVFGDAVGIWHSKVTPAQKRKLLLA 203 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 +G I+ G RSALF P + LG++++DEEHD +YK Q Y+ARD+A+Y I Sbjct: 204 LHSGTIRIIAGARSALFLPIRELGLVIVDEEHDDAYKSQSTPYYNARDMALYLGSKTNIK 263 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD---LKGQKVQAGLAPALI 408 ++LGSATP++ + N ++ + RL R + +I V + + + L+ Sbjct: 264 VVLGSATPSVVSYYNAIKQD-SVYRLRGRYFTSHKSIYIVSQNPQMTIETESTPIDEGLV 322 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 ++++ L+ + Q I+F+ R L+C +CG EC C +LH ++ L CH+C Sbjct: 323 AKIKEKLEHNEQAIVFIPTRAHYKMLVCSECGSGIECAFCSVNMSLHLDKNALICHYCHW 382 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 P+P CP C S L +GT Q+ Q L P I+ DRD + L+ L + Sbjct: 383 SSPIPTLCPKCKSESLHSHRIGTAQVAQALQKALPNAKITLFDRDNITTHTKLKTILQKF 442 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 + G +L+GTQML+KGH + V L +L +D L +D+R ER L Q+AGR+GR Sbjct: 443 NDGDIDVLVGTQMLSKGHDYHRVNLAIILGIDYVLKGSDYRCNERAISLLHQIAGRSGR- 501 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 GEV +Q+ + L+ L Y+ F L R + PP+ + Sbjct: 502 KYDGEVYVQSAN--SIFLEQFLR-DYEDFLHYELRNRPHL-YPPYQRLATLTFSHKIESK 557 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 A +Q +R ++L L ++ ++G AL + ++R+ +LL+ PS L +++ Sbjct: 558 ALNAMQNVREILLKRGLG--EVEIVGDSKALVERLYNKYRFILLLRSPSARALLELLHYL 615 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 A + + +DVDP+ Sbjct: 616 NAHTHQDLGR---MYEIDVDPLN 635 >UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID=C5ZWD1_9HELI Length = 594 Score = 534 bits (1375), Expect = e-150, Method: Composition-based stats. Identities = 171/556 (30%), Positives = 274/556 (49%), Gaps = 29/556 (5%) Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + + + S ++ L+ +Q A+ I+S + LL G TGSGKTE+Y+ Sbjct: 66 IFTPFVKNSTPIKQTSLDFTLPNLSPKQIQALDFINS----HQSSLLFGDTGSGKTEIYI 121 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 ++ L Q K AL+++PEI LTPQ R F + HS L+ +R + NG Sbjct: 122 HLINQTLKQSKNALLLMPEISLTPQMEKRLYAVFGDILAFWHSKLSSKKRKEILKRLHNG 181 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 E I+ G RS+LF P +LG+I+IDEEHD +YK RYH RD+A+Y A I I+LG Sbjct: 182 EIRILAGARSSLFLPLDHLGLIIIDEEHDDAYKSTSAPRYHTRDVALYLAKKTNIKILLG 241 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP T +Q + + RL ++ L P ++ ++++L Sbjct: 242 SATPLANTYYKFKQTQ-SVFRLKGTYYQSKKEFLFCH------SSDELHPFVLQNLKENL 294 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 QA Q I+FL R LLC+ CG +CP C +LH + L+CH+C P+P Sbjct: 295 QAHKQSIVFLPTRANFKHLLCNTCGNNIQCPNCSVSMSLHSKESSLKCHYCHYTSPIPES 354 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP CG T L + +GT++ L+ P I+ DRD+ + + L + L + I Sbjct: 355 CPICGGT-LSSLRIGTQEFANHLSKELPNANIACFDRDSITTQKKLTETLKNFNHHKIDI 413 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQML+KGH + +V L L +D L +D+RS E+ L Q++GR+GR G+V+ Sbjct: 414 LIGTQMLSKGHDYHNVALSVALGLDYILKGSDYRSREKALALMFQLSGRSGRKE-NGKVI 472 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT + + L Y+ F ++ L R + PP+ +++ + A + + Sbjct: 473 IQTLQED--FFRNYLD-DYELFLQEELTFREHL-YPPFMRLALIKVSHKKQETAIIIIND 528 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + ++ + +K+ ++G A K +WR+ ILL+ L ++ Sbjct: 529 ILTILKQNKT--DKIEIVGYGIAPIEKIANKWRYVILLRSKETKALHQMLLKI------- 579 Query: 716 PDSRKVKWVLDVDPIE 731 + + +D+DPIE Sbjct: 580 ---KNIPCEIDIDPIE 592 >UniRef50_Q2NIR1 Primosomal protein N' n=3 Tax=Candidatus Phytoplasma RepID=Q2NIR1_AYWBP Length = 813 Score = 531 bits (1369), Expect = e-149, Method: Composition-based stats. Identities = 176/541 (32%), Positives = 293/541 (54%), Gaps = 10/541 (1%) Query: 161 NDAALQALRKKGLC-DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA 219 +++ +Q+L +K L + + + +++ LN EQ + I+ + Sbjct: 249 SNSIIQSLIRKKLILQTEKKISIILNHNFDLLAEDKKIILNEEQKQILQKIN--INYHKT 306 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHS 278 +LL G TG+GKTE+YL ++ VL Q KQ L++VPE+ L + R + +F + +LHS Sbjct: 307 YLLHGKTGTGKTEIYLHLITKVLNQNKQVLLLVPELMLIAPLMQRLQAKFTKKNIAILHS 366 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 L+ E L +LK K +A IV+GTRSA+F P NLG+I+IDEEH+ + ++E Y AR Sbjct: 367 YLSPKEHLDQFLKIKEQQAYIVLGTRSAIFAPLNNLGIIIIDEEHEEALIEKERATYDAR 426 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 LA RA +IP+ILGSATP+LE+ V Q+ Y+LL LT+R ++D+K + Sbjct: 427 ILAQIRAKYHKIPLILGSATPSLESHYQVLQQNYQLLSLTKRVLIDDFPPIELVDMKEEL 486 Query: 399 VQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + + L +++ + Q ILF+N +GFAP +LC CG++ +C +C++ T + Sbjct: 487 KKGNLEPFSQNLKNALKEVIAKQQQAILFINTKGFAPFVLCRFCGFVPKCHKCNNSLTFY 546 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 Q L+C HC+ + ++C C + VG+G E +E + F + + D DT Sbjct: 547 LKQELLKCSHCNYKEQFTKKCRRCSKEQIKEVGVGIEYIEAYIKKEFLHARLIKFDSDTI 606 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 ++ E+ + ++ A IL+GTQM+AKG F VTLV +L D L F+ +E+ Sbjct: 607 TKISQYEKLWNDFNQEKADILLGTQMIAKGLDFHKVTLVGILMADSLLKIPSFKGSEKTF 666 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL Q AGR GR QG+V++Q+++ +H + + F + L ER+M Q PP+ Sbjct: 667 QLIIQAAGRCGRKE-QGKVIVQSYNVDHFAINAAVKYEEKGFLRKLLEERKMSQNPPFGY 725 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 + + + +++ + + +K+ VLGPV +L PK+ R+R + L++ Sbjct: 726 LSQILISHKDFKKTFNIAYRIKGAL--ANRFSQKITVLGPVLSLIPKKNNRYRCLLTLKY 783 Query: 696 P 696 Sbjct: 784 N 784 Score = 77.2 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 14/156 (8%) Query: 3 VAHVALPVP-----LPRTFDYLLPEGMT--VKAGCRVRVPFGK-QQERIGIVVSVSDASE 54 +A + + + + + FDYL+P ++ RV VPFG +R+G ++++ + S+ Sbjct: 2 IAEIIIDIKTTYQGINKPFDYLVPPHFEKIIQRAMRVVVPFGNANLQRLGYIINLKENSQ 61 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 N LK ++ +LD P F + L V P + Sbjct: 62 FN-NNLKEIITILDENPYFDQEFFLLSQEMLKTPFIIKALVYKTIFPKEFVKSFLKEIKI 120 Query: 115 MWYWFATEQGQAVDLNSLK-----RSPKQQQALAAL 145 + E + N + ++ Q++ L Sbjct: 121 INKELLPENLKGFFTNKNEIFLNPKNKSQEKLLEHF 156 >UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ36_9BACT Length = 673 Score = 531 bits (1368), Expect = e-149, Method: Composition-based stats. Identities = 211/729 (28%), Positives = 321/729 (44%), Gaps = 87/729 (11%) Query: 7 ALP-VPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 A+P +PL Y P+ T + G RV VP G++ G+V SV Sbjct: 26 AIPEIPL---LTYRNPDPSTWIPPGTRVAVPLGRR-TVAGLVWSV--------------- 66 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 P F ++ + VL A P+ + WY+ Sbjct: 67 ----PAPPFDGTLRDIAG------------VLDPA-PVFPSPLHTLVSFGAWYYKIPPGL 109 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 A S L W+ A LE E Sbjct: 110 LAKSALPPSLS------LPKSLPASFWKAYGAPLE---------------------EEKR 142 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAAD-TFSAWLLAGVTGSGKTEVYLSVLENVLA 243 +W + L+ Q+ A+ F+ +LL GVTGSGKT +Y + + L+ Sbjct: 143 EW-------TDLPPLSLAQSDALREWEEKRHHPFAPFLLRGVTGSGKTRLYQEMAKTALS 195 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 +G LV+ PEIGL + R + HS +ER A+ + +G +V+G Sbjct: 196 EGSSVLVLTPEIGLVAPLLEAMRAISPLAEGI-HSAQTKAERTRAFARILSGRVPVVVGP 254 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 RSALF+P LG+I++DEEHD SY+ EG ++AR+LA+ RA IP++LGSATP ++ Sbjct: 255 RSALFSPLSRLGLIIVDEEHDPSYQAYEGLSFNARNLAIRRAQDLGIPVVLGSATPLSDS 314 Query: 364 LCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVIL 423 + +V +Y L L R G H++ + L + R+ L Q ++ Sbjct: 315 IFHVSSGRYHGLSLPGRIGGRSLPAIHLI--PSGSGSSPLPDPVPERIAASLDRGEQSVI 372 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ-AQHHLRCHHCDSQRPVPRQCPSCGST 482 LNRRG+ P LLC C CP C H+ + CH C S VP CP+C Sbjct: 373 LLNRRGYVPTLLCRSCHTTLSCPSCAVRLVFHKVPDRRMICHSCASSYAVPSLCPTCLGR 432 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L G T++LE+ L FPG I R+D D+ +++LA G IL+GTQ++ Sbjct: 433 DLELRGTATQKLEEILGKHFPGARIIRLDADSAQ---DGQERLAAFREGEGDILVGTQVV 489 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGH P VT +L+ DG L D+R++ER L Q+AGR GR + G+V + T P+ Sbjct: 490 AKGHDLPKVTYGVVLETDGMLAFPDYRASERAFGLILQLAGRVGRHREGGQVDIVTRDPD 549 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 +P+L +AF ++ L ERR++ PP+T V + L + R+ Sbjct: 550 NPVLGWARDYNQEAFYKETLDERRLLGYPPFTRLASVILSSTHEAPIREALAE-RSPFGK 608 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 P + + GPVPAL PK R+R Q++++ P+ + + + + + V+ Sbjct: 609 FPAGNG---IFGPVPALPPKLKNRYRAQVVIKGPTIGLVHNRLEQVRSYYQS-RGKILVE 664 Query: 723 WVLDVDPIE 731 W +D P + Sbjct: 665 WQID--PFD 671 >UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, PriA n=9 Tax=Wolbachia RepID=Q5GRP1_WOLTR Length = 786 Score = 530 bits (1367), Expect = e-149, Method: Composition-based stats. Identities = 174/506 (34%), Positives = 276/506 (54%), Gaps = 31/506 (6%) Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 Q L+++PEI LT Q + R R + + + HSGL R + WL NG A I+IG RSA Sbjct: 287 QVLILLPEIVLTSQLVNRIRSQTSRNLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSA 346 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 LF P+KNL +I++DEEHDSS+KQ++G Y+ARD+A+ A E IPIIL SATP LET+ + Sbjct: 347 LFLPYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILAKIENIPIILSSATPLLETIYH 406 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLN 426 V+ Y ++L +R G A + V+D + K ++ L ++Q ++ QV+LFLN Sbjct: 407 VKNGNYNYVKLAKRFGGAELPLIKVVDTRNNK--QWISNELFEGIKQTIEKKQQVMLFLN 464 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH-LV 485 RRG+A +C CG+ C C + H+ ++ L CHHC Q +P +C +C S L Sbjct: 465 RRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLF 524 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G+G E+L + L P + I D S ++ L E I+IGTQ++AKG Sbjct: 525 LYGIGIERLLEETVKLIPNAKTAIISSDQKSVSNVIDLVLKE----ELNIIIGTQIIAKG 580 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H+FP +TLV +++ D +L +AD R+AE+ QL QVAGR+GR ++G V++QT+HPE + Sbjct: 581 HNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSV 640 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI----- 660 ++ L ++ D+F E L R ++PP++ + + N ++ + + Sbjct: 641 IKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCL 700 Query: 661 --------------LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ--HPSRVRLQHI 704 L+ ++ +LGP PA ++R+++LL+ + + +Q Sbjct: 701 SKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKK 760 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 + + N P + +DVDPI Sbjct: 761 LKYWIKNCNLSP---NIIVTIDVDPI 783 Score = 86.8 bits (214), Expect = 3e-15, Method: Composition-based stats. Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 11/140 (7%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +V LP+P+ + F Y + E V G V VPFGK++ IGIV S+ ++ ELK Sbjct: 3 RTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGKKR-LIGIVWKYSNKND---QELK 58 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + + ++ P + W A Y IG + + G + Sbjct: 59 FIEQKIN-LPNIRLKLIAFAEWVAQYNVISIGMLAKVIM------GGVLKVNHLDKLVHV 111 Query: 122 EQGQAVDLNSLKRSPKQQQA 141 EQ Q V + + +P+QQ A Sbjct: 112 EQEQEVSEINYQLNPEQQIA 131 Score = 65.6 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 31/58 (53%) Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 VS +LN EQ A I S + +S LL G TGSGKTEVYLSV+ ++ Sbjct: 112 EQEQEVSEINYQLNPEQQIASNKIISNLNEYSVTLLDGETGSGKTEVYLSVIAQLIKN 169 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriacea... 908 0.0 UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter... 855 0.0 UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=G... 829 0.0 UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteri... 827 0.0 UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix or... 826 0.0 UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organis... 823 0.0 UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacter... 821 0.0 UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-sup... 812 0.0 UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacter... 811 0.0 UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacter... 803 0.0 UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-... 799 0.0 UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisph... 797 0.0 UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum a... 795 0.0 UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=... 795 0.0 UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadale... 792 0.0 UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromo... 792 0.0 UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514... 791 0.0 UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrer... 788 0.0 UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID... 787 0.0 UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Th... 786 0.0 UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-sup... 782 0.0 UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacter... 781 0.0 UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs repli... 781 0.0 UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacter... 781 0.0 UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria... 780 0.0 UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter tur... 780 0.0 UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=S... 779 0.0 UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius the... 779 0.0 UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candida... 777 0.0 UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Ma... 777 0.0 UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbioba... 776 0.0 UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia mucini... 776 0.0 UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium... 773 0.0 UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylop... 772 0.0 UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadens... 772 0.0 UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Ca... 771 0.0 UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 ... 771 0.0 UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs repli... 769 0.0 UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4... 769 0.0 UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium Re... 769 0.0 UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aero... 768 0.0 UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbea... 768 0.0 UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine ... 765 0.0 UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanel... 763 0.0 UniRef50_Q21H75 Transcription elongation factor GreA / replicati... 762 0.0 UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis... 762 0.0 UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44... 762 0.0 UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea... 761 0.0 UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatu... 761 0.0 UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia Re... 760 0.0 UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID... 759 0.0 UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-supe... 759 0.0 UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae ... 759 0.0 UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oe... 758 0.0 UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum therm... 757 0.0 UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Ps... 756 0.0 UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulfo... 756 0.0 UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacter... 755 0.0 UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacte... 755 0.0 UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus caps... 754 0.0 UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus n... 754 0.0 UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachl... 752 0.0 UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferrug... 750 0.0 UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkal... 750 0.0 UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=ce... 749 0.0 UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=... 747 0.0 UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obsc... 746 0.0 UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae R... 745 0.0 UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucom... 744 0.0 UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RI... 743 0.0 UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamo... 741 0.0 UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria... 740 0.0 UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Su... 740 0.0 UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae R... 739 0.0 UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ... 739 0.0 UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepI... 739 0.0 UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=G... 738 0.0 UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=... 737 0.0 UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB... 737 0.0 UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus h... 737 0.0 UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Ma... 734 0.0 UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (... 731 0.0 UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdema... 730 0.0 UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacter... 729 0.0 UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosi... 728 0.0 UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotro... 727 0.0 UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6... 727 0.0 UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminoc... 724 0.0 UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gamma... 724 0.0 UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus ... 723 0.0 UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacteri... 723 0.0 UniRef50_UPI00016C01EC Primosomal protein N (replication factor ... 722 0.0 UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacte... 721 0.0 UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonel... 720 0.0 UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termiti... 720 0.0 UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio s... 719 0.0 UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas auran... 717 0.0 UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=L... 717 0.0 UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepI... 715 0.0 UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales Re... 713 0.0 UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobi... 712 0.0 UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C... 711 0.0 UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum varia... 710 0.0 UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassi... 709 0.0 UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepI... 708 0.0 UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4... 707 0.0 UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID... 706 0.0 UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae Re... 705 0.0 UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae ... 705 0.0 UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales R... 704 0.0 UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii... 703 0.0 UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID... 703 0.0 UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacte... 702 0.0 UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID... 702 0.0 UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae Rep... 702 0.0 UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium cap... 701 0.0 UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae ... 700 0.0 UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna Re... 698 0.0 UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=... 694 0.0 UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides Re... 693 0.0 UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium cu... 693 0.0 UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM... 692 0.0 UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulos... 692 0.0 UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N5... 690 0.0 UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus Re... 687 0.0 UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID... 687 0.0 UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepI... 687 0.0 UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae Re... 685 0.0 UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistip... 684 0.0 UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collins... 684 0.0 UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID... 682 0.0 UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum ... 680 0.0 UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachysp... 680 0.0 UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteri... 680 0.0 UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa... 678 0.0 UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinen... 677 0.0 UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bactero... 676 0.0 UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacteriu... 675 0.0 UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marin... 675 0.0 UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii ... 675 0.0 UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Sy... 675 0.0 UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacr... 672 0.0 UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=... 672 0.0 UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED... 671 0.0 UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus a... 671 0.0 UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepI... 671 0.0 UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=... 670 0.0 UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Ba... 670 0.0 UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Ac... 669 0.0 UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL... 666 0.0 UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flu... 666 0.0 UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n... 666 0.0 UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella gryl... 665 0.0 UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae ... 665 0.0 UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacter... 665 0.0 UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodf... 664 0.0 UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=C... 663 0.0 UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale... 663 0.0 UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio al... 661 0.0 UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimo... 661 0.0 UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton tha... 661 0.0 UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2... 661 0.0 UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhu... 661 0.0 UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae... 660 0.0 UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidat... 660 0.0 UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostri... 659 0.0 UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparin... 659 0.0 UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacteri... 659 0.0 UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacter... 659 0.0 UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleo... 659 0.0 UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacter... 656 0.0 UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication fac... 656 0.0 UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales... 655 0.0 UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia ... 655 0.0 UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferr... 653 0.0 UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria Rep... 652 0.0 UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacter... 651 0.0 UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminoco... 651 0.0 UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepI... 648 0.0 UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacter... 647 0.0 UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerof... 645 0.0 UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacte... 644 0.0 UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobac... 644 0.0 UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Poss... 643 0.0 UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rub... 641 0.0 UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribac... 641 0.0 UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber... 640 0.0 UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales... 639 0.0 UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteri... 638 0.0 UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bact... 638 0.0 UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candida... 637 0.0 UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochrace... 636 e-180 UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 T... 633 e-180 UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio sale... 633 e-179 UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae Re... 632 e-179 UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultur... 631 e-179 UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes Rep... 629 e-178 UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Po... 629 e-178 UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechoc... 628 e-178 UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=... 626 e-178 UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7... 626 e-177 UniRef50_C3XBI2 Primosomal protein N' directs replication fork a... 626 e-177 UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincenti... 625 e-177 UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-sup... 625 e-177 UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysan... 624 e-177 UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospir... 624 e-177 UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter ther... 622 e-176 UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gin... 620 e-176 UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite... 620 e-176 UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes Rep... 619 e-175 UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphen... 619 e-175 UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacif... 619 e-175 UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fu... 618 e-175 UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=... 614 e-174 UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Mo... 613 e-174 UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=De... 613 e-173 UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aura... 611 e-173 UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Ph... 611 e-173 UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=1... 611 e-173 UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis ... 610 e-173 UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2... 606 e-171 UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium ro... 603 e-170 UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=B... 602 e-170 UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacteriu... 597 e-169 UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independen... 596 e-169 UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepI... 596 e-168 UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organism... 594 e-168 UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succin... 593 e-168 UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae Rep... 591 e-167 UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PR... 591 e-167 UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobact... 589 e-166 UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acet... 588 e-166 UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugam... 588 e-166 UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexiba... 585 e-165 UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium p... 584 e-165 UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magn... 584 e-165 UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagib... 581 e-164 UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus mo... 578 e-163 UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B... 574 e-162 UniRef50_C3XEQ9 Primosome assembly protein PriA n=1 Tax=Helicoba... 571 e-161 UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium n... 567 e-160 UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae R... 557 e-157 UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonp... 547 e-154 UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum fer... 541 e-152 UniRef50_Q7VFX4 Primosomal protein N' n=3 Tax=Helicobacter RepID... 538 e-151 UniRef50_A6LJP7 Primosomal protein N' n=2 Tax=Thermosipho RepID=... 537 e-151 UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID... 536 e-150 UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, ... 532 e-149 UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospiril... 532 e-149 UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID... 532 e-149 Sequences not found previously or not previously below threshold: >UniRef50_P17888 Primosomal protein N' n=98 Tax=Enterobacteriaceae RepID=PRIA_ECOLI Length = 732 Score = 908 bits (2347), Expect = 0.0, Method: Composition-based stats. Identities = 732/732 (100%), Positives = 732/732 (100%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL Sbjct: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA Sbjct: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET Sbjct: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN Sbjct: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV Sbjct: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA Sbjct: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ Sbjct: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG Sbjct: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ Sbjct: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH Sbjct: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI Sbjct: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK Sbjct: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 Query: 721 VKWVLDVDPIEG 732 VKWVLDVDPIEG Sbjct: 721 VKWVLDVDPIEG 732 >UniRef50_B0K293 Primosomal protein N' n=8 Tax=Thermoanaerobacter RepID=B0K293_THEPX Length = 732 Score = 855 bits (2210), Expect = 0.0, Method: Composition-based stats. Identities = 249/742 (33%), Positives = 389/742 (52%), Gaps = 28/742 (3%) Query: 3 VAHVALPV---PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V + + R + Y +PEGM VK G RV VPF + G V+S++D + +++ Sbjct: 2 FAEVVVDIKSSNTDRVYTYRIPEGMNVKIGMRVSVPF-NNRFIEGYVISITDKASYSVDK 60 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + +LDS +F + L W DYY + L +P+ ++QG Sbjct: 61 IKDIHRILDSYSIFDEKMIELAKWMKDYYKCYFSEALQTIMPVGIKQGEKKVKVVKI--- 117 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + K++PKQ + L R + V L + +++L+ KG ++ Sbjct: 118 ---NIDEIPSQLSKKAPKQYEILQYLKNRSPIRLSELVKVLNIDYGVIKSLQNKGYIEIY 174 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYL 235 E + + L L EQ AV + + TF +LL GVTGSGKTEVYL Sbjct: 175 EEEVLR--FSVKDIEKTKPLLLTEEQQRAVEEVKRSILTGTFDKYLLFGVTGSGKTEVYL 232 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 +++ + GK A+V+VPEI LTPQTI RF RF V V+HSGL+ ER W K KNG Sbjct: 233 QLIDEAIKIGKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNG 292 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIIL 354 +V+G R+A+F PF NLG+I+IDEEH+++YKQ + +Y+A+++A R E+ +++ Sbjct: 293 LVDVVVGVRNAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIEKAVLVM 352 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 SATP+LET + +Y+L+RLT+R N V+++ + + L + + Sbjct: 353 ASATPSLETYYKANKGEYKLIRLTKRI-NVSMPQIEVVNMSEELASGNTSIFSRKLFSYI 411 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +++L+ Q ILFLNRRG++ + C DCG++ +CP CD T H L CH+C + Sbjct: 412 KENLKRKEQTILFLNRRGYSSFVSCRDCGYVPKCPNCDISLTYHFEDKKLVCHYCGYEET 471 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 + CP CGS + +G+GTE++E + FP + R+D DTT +KG+ E+ + G Sbjct: 472 MKDTCPKCGSKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNG 531 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A ILIGTQM++KG P+VTLV ++ D L DFRS+ER QL TQVAGRAGR K Sbjct: 532 KADILIGTQMISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKP 591 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G VV+QT+ +H + T + Y F + + R + + PP++ + + + Sbjct: 592 GRVVIQTYEDDHYSIVTAKQQNYVKFYNEEIKYREIFRYPPFSHLMNIVVSGEKEEEVKN 651 Query: 652 FLQQLR---NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 +++ +LGP PA K R+RWQ++L+ R I+ Sbjct: 652 TAVSTYLTCQKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDR----DILTEI 707 Query: 709 LALINTIPDSRKVKWVLDVDPI 730 I + S+ ++ +D+DP+ Sbjct: 708 AEEIQKMKYSKDIRIAVDIDPL 729 >UniRef50_A1SYK9 Replication restart DNA helicase PriA n=42 Tax=Gammaproteobacteria RepID=A1SYK9_PSYIN Length = 753 Score = 829 bits (2141), Expect = 0.0, Method: Composition-based stats. Identities = 362/738 (49%), Positives = 501/738 (67%), Gaps = 11/738 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGM-----TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + +AL +PL + FDYLLP+ + GCRVRVPFG +++ IG++ V+ + + Sbjct: 16 ICRIALAIPLHKQFDYLLPDYLLKTEPNNLVGCRVRVPFGGKRQLIGVICEVNPKCDYAI 75 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++LK + +++D P+ ++W LL WAA YY + GDV ALP LRQG+ A + Sbjct: 76 DKLKKITQLIDQTPLLDKNIWSLLRWAAFYYQYAFGDVFQQALPSSLRQGKEAIFKGYEH 135 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T +LN KR+ KQQ AL L + + Q++ + L+AL++KG+ + Sbjct: 136 WQLTAN--PFNLNDFKRAQKQQSALQILSESSLSNQQLSAQGISRPTLKALQEKGVIESV 193 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 + P + +W + S ++ L EQA A+ ++ + F+ +LL G+TGSGKTEVYL+ Sbjct: 194 DKQPVSNLNWLAQFEESAQKPALTVEQAIAISCVNQQLEAFNCFLLEGITGSGKTEVYLN 253 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +++ VL GKQALV+VPEIGLTPQTI RF+ RFN PV + HSGLN E+L WL AK G Sbjct: 254 IIKPVLLAGKQALVIVPEIGLTPQTIKRFQARFNVPVYLKHSGLNPREQLDTWLHAKQGS 313 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AI+IGTRS++F FKNLG+I++DEEHD+S+KQQ+G+RYHARD A+ RA ++IPIILGS Sbjct: 314 GAIIIGTRSSIFCDFKNLGLIILDEEHDASFKQQDGFRYHARDFAIKRAALQKIPIILGS 373 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LETL N Q KY+ L LT R GNA+P +++L G +++GL+P LI M++HL Sbjct: 374 ATPSLETLNNALQGKYQHLHLTERPGNAKPPTNSLINLAGLPLKSGLSPQLIELMKKHLD 433 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 +NQVILFLNRRG+AP L+CH+CGW+ +C RCD +YT H++ ++L CHHC S PVP QC Sbjct: 434 KNNQVILFLNRRGYAPVLMCHECGWLVKCGRCDAFYTYHKSANYLHCHHCASTLPVPHQC 493 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 CGST L G+GTEQLE+TL LFP P RIDRD T +K + Q L +++ G +IL Sbjct: 494 DDCGSTQLNSTGVGTEQLEETLNDLFPDHPTVRIDRDNTRKKESFNQYLTDINSGKYKIL 553 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLVAL+DVDGALF D+R++ER AQL+TQV+GRAGRA K+G+VVL Sbjct: 554 LGTQMLAKGHHFPDVTLVALIDVDGALFCNDYRASERLAQLFTQVSGRAGRAEKKGQVVL 613 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTHHPEH LLQ L+ GY F+ AL ER++ QLPP T ++RAE N A FL Sbjct: 614 QTHHPEHSLLQDLINNGYFEFSRNALQERKLAQLPPSTFQALLRAESDNATLAENFLSLC 673 Query: 657 RNLILSSPLADEKLW---VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 + ++ + + L +LGP+PA +R G++R+Q+LLQ R + I++ L + Sbjct: 674 QQILQQICINNNSLDKLLILGPIPASMERRAGKYRFQLLLQSEQRAVITQILHRALHAFD 733 Query: 714 TIPDSRKVKWVLDVDPIE 731 +P+ RKV+W +DVDPI+ Sbjct: 734 NLPEGRKVRWSIDVDPID 751 >UniRef50_A4VH03 Primosome assembly protein PriA n=76 Tax=Bacteria RepID=A4VH03_PSEU5 Length = 798 Score = 827 bits (2138), Expect = 0.0, Method: Composition-based stats. Identities = 373/736 (50%), Positives = 487/736 (66%), Gaps = 9/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDYL P G T ++ G R+RVPFG++ E IG++V +SD SE+PL + Sbjct: 63 ILRLALPSPLRRLFDYLPPHGATAGSLQPGMRLRVPFGRR-EVIGVLVELSDQSEVPLEK 121 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ +E+LDS P S+++L LW A YY H +GD L ALP+LLRQG PA YW Sbjct: 122 LRPAIELLDSTPPLPPSLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARLERYWR 181 Query: 120 ATEQGQAVDLNSLKRSPKQQQAL--AALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 E D L R+P+Q++ L A + + L+ N +L L +KGL + Sbjct: 182 LAEGANPDD-PRLARAPRQRETLKIIAQHAHGLPHALLGKLQLNKDSLDLLLEKGLVRVE 240 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S + + L LN +Q A AI + F A+LLAGVTGSGKTEVYL + Sbjct: 241 SRRSSPPRQHSGSWLLQAELTLNAQQRAAFEAISAGLGGFQAFLLAGVTGSGKTEVYLQL 300 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VLA GKQALV++PEI L PQT+ARF +RFNA + +LHS +ND ERL AWL A++GEA Sbjct: 301 IHRVLAAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNINDRERLDAWLAARDGEA 360 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 I+IGTRSALFTP KN G+I+IDEEHD+SYKQQEG RYHARDLA+ RA E +PI+LGSA Sbjct: 361 DIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLGSA 420 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L N +Y LL+L++RAGNA+ LD+K + + AG++ L + Q L A Sbjct: 421 TPSLESLHNAHSGRYALLKLSQRAGNAQQPRFLRLDVKSRPLDAGISGPLQQAIGQTLAA 480 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+++LNRRGFAP LLCHDCGW+++C RCD TLHQ + LRCHHC PR CP Sbjct: 481 GQQVLVYLNRRGFAPTLLCHDCGWLSQCQRCDARMTLHQRHNELRCHHCGHVERPPRNCP 540 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG L PVG GTE+ E+ L LFP P+ RIDRD+T+RKGA+E+ ++RG +L+ Sbjct: 541 DCGKVDLRPVGAGTERAEERLGVLFPDYPVLRIDRDSTARKGAMEKMFTTINRGDPCLLV 600 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQL QVAGRAGRA + G+V++Q Sbjct: 601 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVIIQ 660 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH +HPLL L +GY AFAEQAL+ERR LPP++ ++RAE A FL + Sbjct: 661 THLADHPLLVQLTDQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDEAC 720 Query: 658 NLILSS--PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 L + L + +LGPVPA +R GR+R Q+LLQ +R L +++ + L+ + Sbjct: 721 TLAEQTFGQLQLSGIELLGPVPAPMERRAGRYRAQLLLQGNARAALHRLMDAWVPLLEQL 780 Query: 716 PDSRKVKWVLDVDPIE 731 P R V+W LDVDPI+ Sbjct: 781 PGGRAVRWSLDVDPID 796 >UniRef50_B8CWS5 Primosomal protein N' n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWS5_HALOH Length = 745 Score = 826 bits (2133), Expect = 0.0, Method: Composition-based stats. Identities = 250/745 (33%), Positives = 387/745 (51%), Gaps = 21/745 (2%) Query: 2 PVAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A V + + L R++DY +PE + + G V+VPFGKQ G + S + + Sbjct: 3 KYARVVVDIKAPGLNRSYDYKIPEDLENKISIGTAVKVPFGKQ-IITGFITGFSSQTRVE 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR--PAANAP 114 ++K ++ ++ EP+F S+ +L W A YY + +V+ A+P L G+ Sbjct: 62 SVKIKEIMNIISEEPLFDKSMLKLFAWVASYYKTYLINVIKIAIPTGLVSGKVGKIKKRY 121 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG----KIWRDQVATLEFNDAALQALRK 170 + A E+ + V R+PKQ + L + T + + L + Sbjct: 122 VKLLLAEEEARRVIEKINTRAPKQALVVKVLMENDNIDYTVSKLAETAGTSPGTVYRLIE 181 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGS 228 KG + + ++L Q + I + + +LL GVTGS Sbjct: 182 KGYLGYVKKVKIRRPDLGEKEDV-KPVKLTPVQKQVIEKIEDSIEKGVPDTFLLHGVTGS 240 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY++ + QGK +++VPEI LTP + RF +F V V+HS L+ ER Sbjct: 241 GKTEVYINTASRAVEQGKGVIILVPEISLTPLMVRRFYNKFGEQVAVMHSNLSLGERYDE 300 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + K G+A IVIG RSA+F+P +NLG+IVIDEEH++SYKQ E YHAR++AV R E Sbjct: 301 WRRLKEGKAKIVIGARSAVFSPVRNLGLIVIDEEHENSYKQGENPYYHAREVAVMRGKLE 360 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAP 405 ++LGSATP+LE+ ++ Y+ L L R R ++D++ + Q + Sbjct: 361 NASVVLGSATPSLESYYRARKGFYKYLSLPERINQERLPPVEIIDMRDELRQGNTSIFSR 420 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 +L + + L QVI+FLNRRG+A +LC +CG + +C CD T H + LRCH+ Sbjct: 421 SLRDAINKALSNKEQVIIFLNRRGYANFVLCRECGHVIKCNNCDISLTYHADEDLLRCHY 480 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 CD R P +CP CGS + G+GTE+L+ LA F G + R+D DTT+RKG+ + L Sbjct: 481 CDYTRGKPDKCPLCGSKLIKEFGIGTEKLQNELANEFVGARVDRLDVDTTTRKGSHHRIL 540 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 G IL+GTQM+AKGH +P+V++V ++ D L DFRS+ER QL TQVAGR Sbjct: 541 KRFEDGKTDILVGTQMVAKGHDYPNVSVVGVISADTILNLPDFRSSERTFQLLTQVAGRT 600 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR KQG V++QT++P+H +++ + + F + R + PP++ V + Sbjct: 601 GRGSKQGRVIIQTYNPDHYSIKSSSHHNFREFYRHEIRLRHALNYPPFSLLVNIIISGLK 660 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + Q+L N ++ +LGP PA + ++RWQI+L+ S + H++ Sbjct: 661 EKIVVKKAQKLYNFLMQYNQQIN--EMLGPAPAPVYRLRKKYRWQIILKFKSYKKRNHVL 718 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 + R V ++DVDP+ Sbjct: 719 SELQKSFLPD-QGRNVNIIIDVDPV 742 >UniRef50_P44647 Primosomal protein N' n=114 Tax=cellular organisms RepID=PRIA_HAEIN Length = 730 Score = 823 bits (2127), Expect = 0.0, Method: Composition-based stats. Identities = 379/737 (51%), Positives = 502/737 (68%), Gaps = 15/737 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLPR FDY +P+ ++++ G RV VPFG Q+ R+ IV S++P ++L Sbjct: 1 MKIVRVALAVPLPRLFDYFVPDDVSLQIGMRVLVPFGTQK-RVAIVADFPTKSDVPEDKL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+++ LD P+FT W L WAA+YY +GDVLF ALP+ LR G A +W Sbjct: 60 KAILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALPVKLRNGESAVKNDRTFWRI 119 Query: 121 TEQGQ-AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T+ G+ A+ LKRS KQ +AL L + + + +F+ A AL+ KG + + Sbjct: 120 TDAGKNALKQGELKRSKKQAEALQYLSETDL---EKGNNDFSSAIWSALKAKGFIEEITI 176 Query: 180 TPEFSDWRT-----NYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 W+ + RL LN +QA A + + F+ WLL GVTGSGKTE+Y Sbjct: 177 QTNPLSWQQRLGNNPIVNAENRLTLNKQQALAFSQLLFHSG-FNVWLLDGVTGSGKTEIY 235 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L +E +L GKQ LV+VPEIGLTPQT+ RF+ RFN ++VLHS L D++RL W +A++ Sbjct: 236 LQYIEEILKSGKQVLVLVPEIGLTPQTVQRFKVRFNVEIDVLHSNLTDTQRLYVWDRARS 295 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G++AIVIGTRSALFT F NLG I++DEEHDSSYKQQ+ WRYHARDLA+ A I +++ Sbjct: 296 GQSAIVIGTRSALFTQFSNLGAIILDEEHDSSYKQQDSWRYHARDLAIVLAQKLNISVLM 355 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LE++ NVQ KY+ L L++RAGN+ V+DLK Q +Q GL+ L+ RM+ H Sbjct: 356 GSATPSLESINNVQNGKYQHLVLSKRAGNSTALRHFVIDLKNQNIQNGLSKPLLERMKAH 415 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ NQV+LFLNRRGFAP LLCH+CGWIA+CP C+ YT HQ Q+ LRCHHC +Q+ +PR Sbjct: 416 LEKGNQVLLFLNRRGFAPVLLCHECGWIAQCPHCEKPYTYHQHQNVLRCHHCGAQKTIPR 475 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QC CGSTHLV GLGTEQLE+TL LFP ++RIDRD+TSRKG LE L ++ +G ++ Sbjct: 476 QCGDCGSTHLVTTGLGTEQLEETLKTLFPHYSVARIDRDSTSRKGKLEGYLEDIQQGKSQ 535 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 ILIGTQMLAKGHHFP+VTLVAL++VD ALFS DFR+ ER AQLY QVAGRAGRA KQGEV Sbjct: 536 ILIGTQMLAKGHHFPNVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQGEV 595 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 VLQTH+P+HPLL TLL GY AFA++ L R M LPP+T +++A+ ++ A L Sbjct: 596 VLQTHYPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALIKAQARHSDLAENCLS 655 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 Q+ + S + L +LGP+PA K+ G++RWQ+LLQHPSR+ LQ + Sbjct: 656 QIADFFQSKQI--TGLQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTLQKALREYQQA--E 711 Query: 715 IPDSRKVKWVLDVDPIE 731 + + +V+ +LDVDP + Sbjct: 712 LEKNSQVRLILDVDPQD 728 >UniRef50_A6VDH1 Primosomal protein N' n=14 Tax=Gammaproteobacteria RepID=A6VDH1_PSEA7 Length = 739 Score = 821 bits (2122), Expect = 0.0, Method: Composition-based stats. Identities = 370/736 (50%), Positives = 477/736 (64%), Gaps = 10/736 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + +ALP PL R FDY P G+ ++ G R+ VPFG++ E IG+++ V+D SE+P ++ Sbjct: 5 ILRLALPSPLRRLFDYRAPRGIPRSALQPGIRLLVPFGRR-EMIGVLIEVTDRSEVPEDK 63 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK + VLD++P + L W A YY H +GD L ALP LLRQG PA +W Sbjct: 64 LKPALRVLDAKPPMPAHLLELCRWTAQYYQHSLGDSLSWALPNLLRQGEPAEARQQRFWH 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALA--ALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 A EQ ++D L R+P+Q+QALA + + + LE N +L L++KGL +L Sbjct: 124 AVEQS-SLDDPRLARAPRQRQALAILKQHPHGVSHELLNQLEINKDSLDLLKEKGLVELE 182 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + R ++ L LN EQ A A+ ++ +F +LLAGVTGSGKTEVYL + Sbjct: 183 VRRHN-TPPREGGWLAQAELPLNPEQRAAFEAVRASHGSFHCFLLAGVTGSGKTEVYLQL 241 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + LA G+QALV++PEI L PQT+ARF RFNA + +LHS L D ERL AWL A++GEA Sbjct: 242 IRETLAAGRQALVLIPEINLGPQTLARFERRFNARIALLHSALTDRERLDAWLAARDGEA 301 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IVIGTRSALFTP K G+I++DEEHD+SYKQQ+G RYHARDLA+ RA E +PI+LGSA Sbjct: 302 DIVIGTRSALFTPLKRPGLIIVDEEHDASYKQQDGLRYHARDLALVRARLENVPILLGSA 361 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TPALE+L N Q +Y LLRLT+RAG A+P LD+K + AGL+ L + L A Sbjct: 362 TPALESLHNAQAGRYGLLRLTQRAGGAQPPKFIRLDVKSMPLDAGLSRPLQQAIGDTLAA 421 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV++FLNRRGFAP LLCHDCGWI++CPRCD T+HQ LRCHHCD ++ P CP Sbjct: 422 GQQVLVFLNRRGFAPTLLCHDCGWISQCPRCDARMTVHQGSGELRCHHCDHRQRPPMNCP 481 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG L PVG GTE+ E+ L LFP P+ RIDRD+TSRK A+ A ++ G IL+ Sbjct: 482 QCGKLDLRPVGAGTERAEERLRILFPHHPVLRIDRDSTSRKHAMRDLFATINSGEPCILV 541 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLVA+LD DG LFSADFR++ER AQ QVAGRAGRA + G V++Q Sbjct: 542 GTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQQIVQVAGRAGRAEEPGRVLIQ 601 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH +HPLL L GY AFAEQAL+ERR LPP+ ++RAE H A FL Sbjct: 602 THLADHPLLVQLTEDGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEAFLDSAC 661 Query: 658 NLILS--SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + ++ +LGPVPA +R G+ R Q+LLQ SR L ++ L + + Sbjct: 662 GAAEQLLEQIGGPEVELLGPVPAPMERRAGKHRAQLLLQCMSRAPLHRLLAPWLQALEQL 721 Query: 716 PDSRKVKWVLDVDPIE 731 P R+V+W LDVDPI+ Sbjct: 722 PGGRQVRWSLDVDPID 737 >UniRef50_A5D1C1 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=2 Tax=Peptococcaceae RepID=A5D1C1_PELTS Length = 746 Score = 812 bits (2098), Expect = 0.0, Method: Composition-based stats. Identities = 257/742 (34%), Positives = 380/742 (51%), Gaps = 19/742 (2%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A V + + R F Y +P + G V VPFG + G VV Sbjct: 7 FAEVIVDLSSRNTDRVFHYAIPPDYRDKIAVGSMVTVPFGNRH-LTGYVVGFGIPPG--E 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +K + V+D PVFT + L W A+ Y + L L+ + Y Sbjct: 64 VRIKEIAGVIDEGPVFTPELLELARWMAENYLCSTAEAFARILSPRLQVKASRRADVLVY 123 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALA--ALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 L+ L RSPKQ L A G + A + + AL KKGL Sbjct: 124 PALAGAEMEKALSLLGRSPKQLAVLQKAAGCPGLTKSELAAAAMTSSKTVDALLKKGLLK 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEV 233 +++ P + + L LN +Q A+ I ++ D F +LL G+TGSGKTEV Sbjct: 184 VSAVMPAYLQDAPGDMIKTGSLTLNQDQEAALREISASLDRGRFDVFLLHGITGSGKTEV 243 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL + L G+QA+ +VPEI LTPQ + FR RF V VLHS L+ ER W + K Sbjct: 244 YLRAIAAALETGRQAVALVPEISLTPQMVELFRGRFGGQVAVLHSALSGGERYQEWRRVK 303 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 G+A++V+GTRSA+F P G+ +IDEEH+ SYKQ + RYHAR++A+ RA ++ Sbjct: 304 EGQASVVLGTRSAVFAPCPRPGLFIIDEEHEPSYKQDDHMRYHAREIALKRAQLAGAVVV 363 Query: 354 LGSATPALETLCNVQQK-KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 LGSATP+LE+ Y+LL+L RR V+DL+ + + + L+ Sbjct: 364 LGSATPSLESFSRAVSGGPYKLLKLPRRVDERPLPRVRVIDLRQEIREGNRGIFSRPLLY 423 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + L+ Q ILFLNRRG++ ++C +CG + +CPRCD T H + LRCH+C+ Sbjct: 424 ALNGCLERGGQAILFLNRRGYSTVVVCRECGLVLKCPRCDISLTYHL-EGRLRCHYCNHL 482 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P CP CGS ++ G GT+++E+ +FP I R+D D+T++KG+ ++ L Sbjct: 483 AVLPGLCPGCGSRYIRHFGAGTQKVEEEARKIFPKARIVRMDSDSTAQKGSHQKILDAFR 542 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 G ILIGTQM+AKG P VTLV +++ D AL DFR+AER QL TQVAGRAGR G Sbjct: 543 DGLYDILIGTQMIAKGLDLPGVTLVGVINADTALHMPDFRAAERTFQLLTQVAGRAGRGG 602 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV++QT+ PEH + Y+ F +A RR++ PP++ + + + Sbjct: 603 LPGEVLIQTYSPEHYSISAAAAHDYEGFYRSEMAVRRVLGYPPFSHLARLLFTHEDEEEV 662 Query: 650 PLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 ++ + L+ + ++ +LGP PA K G +RWQ++L+ R ++ II Sbjct: 663 RKGAEKSKELLDRLVSGRNCRVEILGPAPAPLSKIKGHFRWQLVLKGRRRENIKEIIREG 722 Query: 709 LALINTIPDSRKVKWVLDVDPI 730 LA + + V +D++P Sbjct: 723 LAELERDRRFK-VAVNVDINPQ 743 >UniRef50_A8FQM3 Primosomal protein N' n=26 Tax=Gammaproteobacteria RepID=A8FQM3_SHESH Length = 742 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 364/735 (49%), Positives = 504/735 (68%), Gaps = 10/735 (1%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP VALPVP+ + F Y +P+ ++ K G RV+VPFG+QQ IG+V +SD L Sbjct: 12 MPLFVEVALPVPMRQAFSYKVPDSISTLPKKGMRVKVPFGRQQ-LIGLVTGISDTCNLAP 70 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K++ E+LD EP+ S+++L WAA YY +G +L A+P+ LR+G ++ + Sbjct: 71 QQIKSIFELLDDEPLLPDSLYKLTAWAARYYFCSLGQMLSQAIPVALRKGAEISSNTTTF 130 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 W T+ G++ L++LKR+P Q++ + L +G++ +D++++L + +AL+AL ++ Sbjct: 131 WHLTQSGRSASLDTLKRAPAQKKVMEHLLKGELTQDEISSLALSKSALKALNERAWITQD 190 Query: 178 SETPEFS-DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 WR + + L LN EQA AV ++ + LL G+TGSGKTEVYL+ Sbjct: 191 ERVNSIDLSWREKLELDEDPLTLNPEQAIAVATLNQQTG-YHCTLLEGITGSGKTEVYLA 249 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +LE+VL++GKQAL++VPEIGLTPQTI+RF+ RF V V+HSGL D++RL+AW +AK GE Sbjct: 250 LLESVLSKGKQALILVPEIGLTPQTISRFKSRFKVQVAVIHSGLTDNQRLAAWQQAKTGE 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AAI+IGTRSALFTP GVI++DEEHDSS+KQQEG YHARDLAV R H E+IP++LG+ Sbjct: 310 AAIIIGTRSALFTPMAFPGVIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGT 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N +Y+ L L +RAGNA Q ++D+ Q + GL+ AL+ MR HL Sbjct: 370 ATPSLESLQNALSGRYKHLELGQRAGNAEKVRQGIIDISNQPLNTGLSHALLNEMRIHLD 429 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQV+LFLNRRGFAPALLCH+CG + EC RCD ++T+HQ+ +RCHHC + +P+QC Sbjct: 430 AGNQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNHYAIPKQC 489 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 +CGST L+ G+GTEQL L FP P+ RIDRDTTSRKGALE L +H+G +IL Sbjct: 490 HNCGSTMLMGQGVGTEQLANILEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKIL 549 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHFPDVTLV LLDVDGALFSADFR+ ERF QLYTQV+GRAGRA K G V++ Sbjct: 550 VGTQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLM 609 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH ++P+L+ L++KGY FA L ER+ LPP +++RAE H A FL Q+ Sbjct: 610 QTHQADNPVLRELMHKGYGEFARGQLNERKQALLPPAWHMLLIRAEAHQALDADNFLSQV 669 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 L+ +E+ V+GP+PA K+ G++R ++ Q SR +LQH L I ++P Sbjct: 670 AELLPQ----NEESEVIGPMPAPMDKKAGKYRRHLIFQTKSRNQLQHAFEHALPQIESLP 725 Query: 717 DSRKVKWVLDVDPIE 731 +++ +W LD DP + Sbjct: 726 LAKRCRWSLDRDPQD 740 >UniRef50_C6PE53 Primosomal protein N' n=3 Tax=Thermoanaerobacterales RepID=C6PE53_CLOTS Length = 735 Score = 803 bits (2075), Expect = 0.0, Method: Composition-based stats. Identities = 246/744 (33%), Positives = 386/744 (51%), Gaps = 31/744 (4%) Query: 3 VAHVALP---VPLPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 A V L + R Y +P+ + +K G RV VP K G +++S+ E+P+ Sbjct: 6 FADVVLNEFSRNIDRILTYRVPDDIKNLKIGSRVLVPVNKS-FVEGYAINLSEKIEIPIE 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ++K ++ VLD VF + L +W DYY + + L +P ++ G Sbjct: 65 KVKPIMRVLDDFTVFDEKLLNLAIWMRDYYKCNLSESLQCIIPSGIKNGIKKVKKVTLNK 124 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDL 176 L+ +P+Q + L L+ D V L + + + +L +KG+ + Sbjct: 125 G--------YLDDASITPRQFEILNYLKDNGTVLLSDLVKDLNISYSTVNSLARKGIICV 176 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVY 234 + + + ++L EQ + + + F +LL GVTGSGKTEVY Sbjct: 177 YYDEVNR--LKMSDYKKTDKLIPTKEQEFVINEVKHSIGRNVFEKYLLFGVTGSGKTEVY 234 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++E + +GK+++V+VPEI LTPQTI RF RF V VLHSGL+D ER W + KN Sbjct: 235 LQLIEKCIEEGKESIVLVPEISLTPQTIERFISRFGNLVAVLHSGLSDGERFDEWRRIKN 294 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPII 353 GE +V+G R+A+F PF N+G+I+IDEEH+++YKQ + +Y+ +++A R E+ ++ Sbjct: 295 GEVKVVVGVRNAIFAPFSNIGLIIIDEEHENTYKQSDFKPKYNVKEVAEKRCEIEKAVLL 354 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP +E+ + +Y+LL+L R V+++ + + L Sbjct: 355 LGSATPQIESYYKALRNEYKLLKLKERI-GLELPEVDVVNMSRELADGNNSIFSRKLYKE 413 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 +R++L Q ILFLNRRG++ ++C DCG++ ECP CD T H + LRCH+C Sbjct: 414 IRENLMKGEQTILFLNRRGYSSFVMCRDCGYVPECPNCDISLTFHANESKLRCHYCGYNI 473 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 CP CGS + +G+GTE++E+ + LFP + R+D DTT KGA E+ E Sbjct: 474 NTVYVCPKCGSRRVRYLGIGTERVEKEVKKLFPRSRVLRMDIDTTKTKGAHEKIFNEFKN 533 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A ILIGTQM++KG P+VTLV ++ D L DFRS ER QL TQVAGRAGR K Sbjct: 534 GNADILIGTQMISKGFDIPNVTLVGVILADVTLNIPDFRSGERTFQLLTQVAGRAGRGSK 593 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G V++QT+ ++ + + + Y++F ++ + R PP+T + + Sbjct: 594 PGRVIIQTYEEDNYSIISAKNQDYESFYKEEIRYRETYMYPPFTHLLNIVVSGPIKNDVV 653 Query: 651 LFLQQLRNLILS---SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 + NLI + VLGP A + +RWQI+++ R LQ + Sbjct: 654 TCAASVYNLIYKTINKSVKKSYNKVLGPSSAPIERIKNNYRWQIIIKSSERAILQDV--- 710 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 ++NT+ + +K D+DP+ Sbjct: 711 -CDVLNTLKFHKGIKISFDLDPLN 733 >UniRef50_Q3IJD8 Primosome factor Y, also called protein n'; ATP-dependent DNA helicase activity required for recA-dependent stable DNA replication mode; also involved in double-strand break repair n=3 Tax=Alteromonadales RepID=Q3IJD8_PSEHT Length = 728 Score = 799 bits (2064), Expect = 0.0, Method: Composition-based stats. Identities = 353/737 (47%), Positives = 468/737 (63%), Gaps = 17/737 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM-----TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M VA+ VPLPRTFDY + + +K G RV VPFG Q++ + +V+++ +E+ Sbjct: 1 MYFVEVAIKVPLPRTFDYKVDSQLGEASAPLKPGMRVLVPFGNQRK-VAVVLALKTTTEV 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 P N++KA+ E++D P+ + LL + A YY +P+G+ + ALP LRQG + Sbjct: 60 PENKIKAIFEIIDDTPILSAEHIELLRFTARYYCYPLGETIHIALPSALRQGESPDKTSI 119 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 TE+G L SLK + + GK ++ L F+ + +L K L Sbjct: 120 NMVALTEKG--ALLPSLKAKTQLNLLKQLSQSGKSSLTELKALGFSKKTIDSLIDKALIT 177 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + E + W++ G + LN EQA A I+ ++ FS++LL GVTGSGKTEVYL Sbjct: 178 QSIE--HDNHWQSVAPTVGSKPTLNKEQAVACTTINQSSG-FSSFLLEGVTGSGKTEVYL 234 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKN 294 LE VL +G+QALV+VPEIGLTPQT+ RFR RF P+ + HS L D+ERL W + Sbjct: 235 QCLEEVLKRGEQALVLVPEIGLTPQTVNRFRRRFPDTPIMLWHSALTDNERLQTWRFCEK 294 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 AIVIGTRS++F PF LG+IV+DEEHDSS+KQQ+ RYHARDLA YRA+ +IP+IL Sbjct: 295 ASCAIVIGTRSSIFLPFLKLGMIVVDEEHDSSFKQQDTLRYHARDLAAYRAYQHKIPLIL 354 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATPALETL KY+LL LT RA A +LD+KGQ QAG+A A + MRQH Sbjct: 355 GSATPALETLHKAINNKYQLLSLTERAQTATDNQFKLLDMKGQPDQAGIAHASLATMRQH 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ QV++FLNRRGF+P L+CH+CGW++EC RC T H+A + CHHC Q VP Sbjct: 415 LKRGKQVMVFLNRRGFSPTLICHECGWLSECKRCSTSATFHKAIGQMICHHCGDQYHVPH 474 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QCP CGST + P G GTEQ+E+ L+ FP P++RIDRD+T RKG+LE+ L E++ GGAR Sbjct: 475 QCPDCGSTQIFPNGKGTEQIEEFLSSEFPQTPVTRIDRDSTRRKGSLEKALDEINLGGAR 534 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHHF DV+LV +LDVD L+S DFR+ E AQL TQVAGRAGR+G+ G+V Sbjct: 535 ILVGTQMLAKGHHFADVSLVVILDVDSGLYSCDFRATEHLAQLVTQVAGRAGRSGEAGQV 594 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQTH PEHPLLQ L+ GY FA AL ER LPP T+ IVRA+ HN + FL Sbjct: 595 LLQTHFPEHPLLQDLVNNGYQDFARFALREREDADLPPITNMAIVRAQGHNIKQVVDFLT 654 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 L + +LGP+PA K G +R+Q+ +Q R L + + ++T Sbjct: 655 DLV-----PVSGVTGIQLLGPIPAPLEKVAGMYRFQLHIQAQDRRVLHQYLAQMVDYLST 709 Query: 715 IPDSRKVKWVLDVDPIE 731 ++KV+W LDVDPI+ Sbjct: 710 SKLAQKVRWSLDVDPID 726 >UniRef50_A6DK13 Primosome assembly protein PriA n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DK13_9BACT Length = 735 Score = 797 bits (2060), Expect = 0.0, Method: Composition-based stats. Identities = 265/740 (35%), Positives = 395/740 (53%), Gaps = 18/740 (2%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 MP A V + L +TFDY +P GM ++ GCRVR+PFG + ER G VV + D S+ P N Sbjct: 1 MPKFARVLPDMSLDKTFDYKIPAGMDLRLGCRVRIPFG-RTERTGYVVDLVDKSDFPENR 59 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LKA+ ++ + + +L W ADYY + + + LP +R+ + F Sbjct: 60 LKAIA--VNEGHLIPEKMMQLGQWIADYYCTGMIQSVRNMLPAPVRKDKVKEKTQKLLSF 117 Query: 120 ATEQGQAVDLNSL-KRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 A + L K+ P + + A + + + + +++L K G+ + Sbjct: 118 AEGIQPPSLVPELEKKYPPRAAVVKALLGLKEAPQALLMKVANVSASPIKSLLKAGILEE 177 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVY 234 E + + + L L EQ A I + + + +L G+TGSGKTEVY Sbjct: 178 EVRHVERDPFGDEEVIISKPLELTDEQTDAFKLITNEMDEEKPATVVLYGITGSGKTEVY 237 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + L++GKQA+V+VPEI LTPQT+ RFR RF V VLHSGL++ ER W Sbjct: 238 LQAIAEALSRGKQAIVLVPEISLTPQTVHRFRSRFGKQVSVLHSGLSEGERYDQWKLISR 297 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GE IV+G RSALF PF N G+IV+DEEH+ SYKQ RY+ARD+AV R ++ P++L Sbjct: 298 GETQIVVGARSALFAPFHNPGIIVVDEEHEPSYKQDSHPRYNARDIAVMRGIMDKCPVVL 357 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITR 410 GSATP+ ET+ N Q KY++ +LT+R A ++D++ + G + LI Sbjct: 358 GSATPSFETMNNANQGKYKMAKLTQRPSTAVVPSIKLVDMRTEAAATGSNQIFSRELIES 417 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 ++Q L Q ILFLNRRG++ L C C + ++C C +T H+ + L CH C + Sbjct: 418 VKQQLHDRMQTILFLNRRGYSTHLTCEKCQYTSKCGDCSTSHTYHRKSNVLICHLCGDIK 477 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P +CP CG L GLGTE++E+ +FP I+R+D DT +RK + + L + + Sbjct: 478 EPPTKCPDCGHKDLSFSGLGTEKIERLCRGVFPNARIARMDSDTMTRKDSHKTMLGDFQQ 537 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G ILIGTQM+AKG HFP VTLV ++ D L ADFR+AER QL QV+GR+GR Sbjct: 538 GKYDILIGTQMIAKGLHFPRVTLVGVVFADAGLNMADFRAAERTFQLLAQVSGRSGRGDD 597 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G V++QT++P HP LQ L +DAF E R +M+ PP++ V++ Sbjct: 598 AGRVLIQTYNPTHPALQCALEGDFDAFYEDEKMGREVMKFPPFSKMVLIHFRGPEEGPLA 657 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 + + D+ ++ VP+ K G++R+Q+ + + RL ++N Sbjct: 658 SLASDFSQHLSKACTKDD--RLMPAVPSPIEKVRGQYRYQLTIFSDNIRRLVRVLNWLR- 714 Query: 711 LINTIPDSRKVKWVLDVDPI 730 ++ K ++DVDP Sbjct: 715 --LNYKAPKEYKIIIDVDPQ 732 >UniRef50_C8W073 Primosomal protein N' n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W073_DESAS Length = 747 Score = 795 bits (2054), Expect = 0.0, Method: Composition-based stats. Identities = 260/744 (34%), Positives = 396/744 (53%), Gaps = 19/744 (2%) Query: 3 VAHVALPVPL---PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A + + VP+ R F Y++P + +K G RV VPF ++ G VV S +++ Sbjct: 6 YAEIVVDVPVRNVDRVFSYIVPADLFPAIKFGMRVIVPFAGRKV-TGYVVGFSGITQVSQ 64 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +LK V+ VLD+EPV T +W L W YY + L + +R + +W Sbjct: 65 EKLKPVLAVLDNEPVITEELWTLARWMKAYYLCTLAQALKCMVSPAVRVKAAGSYTGLWI 124 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCD 175 FA + A L L RSPKQ + A + G + + + A + AL KGL Sbjct: 125 GFA-DNQLAQVLAKLNRSPKQSAVIKAAAGQPGLSPKALADQVGVSSATVSALVGKGLLQ 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEV 233 + + + + L EQA G I A + + L G+TGSGKTE+ Sbjct: 184 ARTTSVRRNPYPIKPTGIPGP-VLTPEQAYCAGEIIRAIESSQSQVFALHGITGSGKTEI 242 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL+V+ L G++ L+ VPEI LT Q + F+ER+ V VLHS L+ ER W + + Sbjct: 243 YLNVIARALVLGRKTLITVPEIALTGQMVNTFKERYGDTVAVLHSALSAGERYDEWQRIR 302 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 NG++ IV+GTRSA+F P G+++IDEEH+++YKQ + RYHAR++A+ RA +I Sbjct: 303 NGDSKIVLGTRSAVFAPLSGPGLLIIDEEHEAAYKQDDQARYHAREVALQRAKLSGAVVI 362 Query: 354 LGSATPALETLCNVQQ-KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 LGSAT +LE+ C Q+ YR L + R +DL+ + + + AL+ Sbjct: 363 LGSATMSLESYCRAQKEGPYRYLSIENRIEQKPLPQIKTIDLRAETHKGNPGIFSLALLQ 422 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ + ++ Q ILF+NRRGF+P ++C DCG++ +CP CD T H LRCH+C+ Sbjct: 423 KIEEKIRLKEQTILFINRRGFSPIVICRDCGFVLKCPHCDISLTYHS-DLTLRCHYCNYI 481 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 PV +C +C S L G GT+++E+ + +FP + R+D DTTSRKGA + L Sbjct: 482 SPVINKCSNCASEQLRFAGTGTQKVEEEIRHIFPSAGVLRMDADTTSRKGAHAEILKNFL 541 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 G A ILIGTQMLAKG + P+VTLV +++ D L DFR+AE+ QL TQVAGRAGR Sbjct: 542 DGKADILIGTQMLAKGLNLPNVTLVGVINADTTLHMPDFRAAEKTFQLLTQVAGRAGRGE 601 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 K GEV++QT++PEH ++ L Y F Q + RR + PP++ + + + Sbjct: 602 KPGEVIIQTYNPEHYSIKAALNNSYKDFYAQEMIIRRELGYPPFSRLIRIILSSTQSALV 661 Query: 650 PLFLQQLRNLILSSPL--ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 L+ +L + +LGP PA K ++RWQI+L+ + L+ + Sbjct: 662 QSGAFLLKECLLEAQRDFNPHGPDILGPAPAPLHKIKEKYRWQIVLKGKQALILRQLAAK 721 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 + + + +R + ++DV+P Sbjct: 722 GIDIFESRQGNRLLSIIVDVEPQN 745 >UniRef50_A6W2U3 Primosomal protein N' n=2 Tax=Marinomonas RepID=A6W2U3_MARMS Length = 743 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 335/736 (45%), Positives = 459/736 (62%), Gaps = 10/736 (1%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV----KAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 P VALPVP+ FDY +P+ + + K G RV+VPFGK R+G++V++S+ S+ Sbjct: 10 PFIKVALPVPMRTLFDYKVPKAIALRHALKPGMRVKVPFGKSS-RLGVIVALSETSDWDP 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++K + + D PV T + L WAA YYHHPIGDV+FHALP+LLR+G A + Sbjct: 69 EQVKPLTSMHDQSPVITEELMALCEWAARYYHHPIGDVIFHALPVLLRKGESAEFRTENW 128 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLCD 175 W T +GQA+ L L R+P+QQ L A++Q + + + L+ AA ++L +KGL Sbjct: 129 WLTTPEGQALPLEQLSRAPRQQDFLKAVQQHPNGLSQHAASVLDLAPAAGKSLEEKGLLR 188 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + + + LN EQ A + F+ LL GVTGSGKTEV+L Sbjct: 189 REPRSFNKGGEKHAHQTQVPP-TLNPEQMRATEHLLDYRHQFNVALLDGVTGSGKTEVFL 247 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 V+E ++ +GKQ LVMVPEIGLTPQT+ RF RFN + ++HS ++D ERL AWL A G Sbjct: 248 RVMERLIEEGKQILVMVPEIGLTPQTLKRFEIRFNTDIVLMHSNMSDRERLDAWLLAACG 307 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 A I+IGTRSA F P NLG+IVIDEEHD+SYKQ EG+RYHARDLA+ RA + IP++L Sbjct: 308 HAKIIIGTRSAAFIPAPNLGMIVIDEEHDTSYKQHEGFRYHARDLAIKRAQALNIPVLLA 367 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP+ E+L N QK++ L+L +RAGNA +DL+G+ + G + + M+ L Sbjct: 368 SATPSYESLTNALQKRFAWLKLRQRAGNAHIPEMERVDLRGKTLVHGFSEHALASMKLCL 427 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + QV++FLNRRG+AP L+CH CGWIA C CD T+H+ + L CHHCD+Q+ + Sbjct: 428 ERKEQVLVFLNRRGYAPTLMCHQCGWIAACDHCDVNLTVHKRANKLHCHHCDTQKALLHT 487 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C S L VG GTEQ+E L+ LF VPI RIDRD+T RK A+ + ++H I Sbjct: 488 CPECQSEELFTVGEGTEQIETQLSTLFKDVPILRIDRDSTQRKSAMAKLTQKIHEHDQAI 547 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQMLAKGHHFP+VTLV ++D D LFS+DFR ER AQL TQVAGRAGRA K G V+ Sbjct: 548 LIGTQMLAKGHHFPNVTLVIIMDADAGLFSSDFRGMERTAQLITQVAGRAGRAKKPGHVL 607 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQT+HP+H ++ L GY+ FA LAER+ + LPP+ VI+RAE N Q A L Sbjct: 608 LQTYHPDHAAIECLCNLGYEHFAIDGLAERKSLSLPPFYHQVIIRAESGNEQEAMQLLSA 667 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 +RN + P + ++++GP A+ ++ G+ R I ++ R L + Sbjct: 668 MRNDLE--PYFAKDVYLVGPYAAIIVRKAGQHRALISIKAAQRAPLHQATQMMTEWLEQS 725 Query: 716 PDSRKVKWVLDVDPIE 731 ++++ +DVDP+E Sbjct: 726 TKQHRIRFAIDVDPLE 741 >UniRef50_B3E7V0 Primosomal protein N' n=11 Tax=Desulfuromonadales RepID=B3E7V0_GEOLS Length = 758 Score = 792 bits (2046), Expect = 0.0, Method: Composition-based stats. Identities = 268/741 (36%), Positives = 392/741 (52%), Gaps = 20/741 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VA+P+PL TF Y +PE + ++ G RV VPFG+++ V+ S E +LK Sbjct: 23 VEVAVPLPLDTTFHYRVPEDLAPRIQPGVRVFVPFGRRKV-TAYVLRFSTPPE--GQQLK 79 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN--------A 113 +++VLD EP++T + W ADYY HP+G+VL ALP + ++ Sbjct: 80 GLLDVLDPEPLWTEAELTFFQWIADYYLHPLGEVLKTALPTGINLQSRSSVDGEAVSGGK 139 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + + A L+ A + L+ L + GL Sbjct: 140 KVRHERVFSALPADAPVKLRGKGLDILAFLRQSGSVSSAELKVRFGECSPNLRRLVELGL 199 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKT 231 ++ + L Q A+ I +A D+ FS +LL G+TGSGKT Sbjct: 200 VRMSEHEVYRDPFAGLSVTKDSPKPLTLHQQQALTTILTALDSRYFSPFLLHGITGSGKT 259 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + + LA G+ ALV+VPEI LTPQ + RFR RF + VLHS L+D ER W + Sbjct: 260 EVYLQGIAHTLAAGRNALVLVPEISLTPQLVQRFRARFCDGIAVLHSALSDGERYDEWRR 319 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GE IVIG RSA+F P + +G+IV+DEEH++S+KQ +G RY+ARDLA+ R EQ Sbjct: 320 IRRGEVRIVIGARSAIFAPLERIGIIVVDEEHEASFKQSDGLRYNARDLALVRGQQEQAV 379 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 ++LGSATP + T QQ K L L R GN +++ + ++ L+P LI + Sbjct: 380 VLLGSATPLITTRFAAQQGKLGYLSLPERVGNRPLPATSIINTR-MTAESPLSPQLIEAL 438 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +L+ Q +LFLNRRGFA L+C CG +CP C T H+ + CH+CD Q P Sbjct: 439 ADNLERGEQSLLFLNRRGFASWLVCPACGADLQCPNCSVSLTYHRQRRKSLCHYCDYQVP 498 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 P CPSCG L +G+GTE++E L FPG I+R+D DTTS KG + L +V RG Sbjct: 499 APCICPSCGELELKEMGVGTERIEHELLEQFPGARIARMDSDTTSGKGGHARILDKVGRG 558 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 IL+GTQM+AKGH FP VTLV +L +G+L+ DFR+ ER Q+ +QV GRAGR Sbjct: 559 EVDILVGTQMIAKGHDFPGVTLVGVLQAEGSLYLPDFRATERTFQVLSQVIGRAGRGELP 618 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V+LQ P+H + ++ F ++ L R+ + PP+ ++ + + Sbjct: 619 GRVLLQAMTPDHYGIAYAADHDFERFYQEELLFRQELNYPPYGFLAAIKLSATSEKSLTS 678 Query: 652 FLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 +Q ++ S ++ +LGP PA + GR+R QILL+ SR L+ ++ +A Sbjct: 679 AAEQSAAVLRSIKSRLGLRVEILGPAPAPLYRLRGRFRQQILLKDSSRAALRRLL---IA 735 Query: 711 LINTIPDSRKVKWVLDVDPIE 731 V+ +D+DP++ Sbjct: 736 YRREQSLPATVRMAIDIDPVD 756 >UniRef50_B4RY99 Primosome assembly protein PriA n=3 Tax=Alteromonadales RepID=B4RY99_ALTMD Length = 729 Score = 792 bits (2045), Expect = 0.0, Method: Composition-based stats. Identities = 344/735 (46%), Positives = 461/735 (62%), Gaps = 12/735 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP---L 57 M VA+PVPL + F Y + +AG RV VPFG ++ +G+VV SE Sbjct: 1 MAFIQVAVPVPLRQLFTYTHDSAL--EAGVRVMVPFGPRK-LVGVVVETLRKSESEIDNS 57 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N+LKA+ VLD +P+ + ++ W YYHH G+VL LP+LLR+G A P Sbjct: 58 NKLKAIEMVLDHQPIVDGVLLKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAGPTPQDM 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 T++G+ SL R+PKQ A + A +F A++AL +K L + Sbjct: 118 LMLTDEGKKTLSASLSRAPKQNACFTA-LTKRAMLAIEARKQFGAPAVKALVEKSLAVIK 176 Query: 178 SETPEFSDWRT-NYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 TPEF + E+ +TEQ+ A+ A++ F+ LL GVTGSGKTEVYL Sbjct: 177 EVTPEFKPGAWLSTLTMAEKPVPDTEQSVAIAALNRQHGNFAVSLLEGVTGSGKTEVYLQ 236 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +E +L +GKQ L++VPEIGLTPQT++RF +RF V VLHS L+D +RL W +AK GE Sbjct: 237 AIEPLLREGKQVLILVPEIGLTPQTVSRFEKRFGIAVGVLHSQLSDKDRLQVWQRAKAGE 296 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 IVIGTRSA+FTP N G++++DEEHD S+KQQ+G RYHARDLA RA IP++LGS Sbjct: 297 LGIVIGTRSAIFTPLNNPGMLIVDEEHDESFKQQDGLRYHARDLAAMRAKQHNIPLLLGS 356 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATPALETL N +Y L+LT+RAG A+ QHVLD + Q + G++ L+T MRQH+ Sbjct: 357 ATPALETLNNALSGRYAHLQLTKRAGGAQSTHQHVLDARDQPIHYGISQGLLTIMRQHIS 416 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A NQV++F+NRRG+APALLCH CG C RC+ YT+H+AQ+ L+CHHC R +P C Sbjct: 417 AGNQVLVFVNRRGYAPALLCHHCGETVTCKRCERPYTVHKAQNRLQCHHCGGMRAMPTNC 476 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 +C LV G GTEQ+EQ LA LFPGV RID DT K L Q L ++R ++L Sbjct: 477 EACHYNELVTAGTGTEQVEQGLASLFPGVTQVRIDSDTVRGKDKLHQTLDAINRQEYQLL 536 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQ+L+KGHHFP VTLVA+LD DGALFSADFR+ E+ AQL TQ+AGRAGRA K GE+ L Sbjct: 537 VGTQILSKGHHFPHVTLVAVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWL 596 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QTH+P HPLLQ L++ GY FA AL ER+ LPP+ S ++RAE ++ A FLQ Sbjct: 597 QTHNPHHPLLQDLVHNGYGHFARHALMERKAASLPPFISQFVIRAEATDSSLAYRFLQDC 656 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + + + + + GP P L KR GR+R+ ++ H R L + + L + +P Sbjct: 657 KQVFTQAHA----IEISGPFPCLIEKRQGRFRFMLVCSHQKRAPLHNALRLALPFLQALP 712 Query: 717 DSRKVKWVLDVDPIE 731 + KV+W +D+DP + Sbjct: 713 QATKVRWSIDIDPTD 727 >UniRef50_B9XLJ1 Primosomal protein N' n=1 Tax=bacterium Ellin514 RepID=B9XLJ1_9BACT Length = 773 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 264/779 (33%), Positives = 399/779 (51%), Gaps = 59/779 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A V L + L + FDYL+P + V G RV+VPFG ++ G V ++++ S L Sbjct: 2 IARVTLEIALRKEFDYLIPSELASQVDVGSRVQVPFGARKVL-GCVTAMAEES--AHANL 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + +++V+ ++ + T + +L W +YY P L LP +R+ + ++ Sbjct: 59 RPILKVIGAQTLVTPKILKLARWIGEYYCCPPEIALKSVLPDAVRKEQAGWRERLFVRAL 118 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + L L + ++ + R+ ++ + E A +++L KGL + +E Sbjct: 119 PQTEP---LPKLPKRQQEVYRILEERKELPLQELIDLAETTAATVRSLEDKGLVTITTEI 175 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT------------------------ 216 E + + + + L LN +QA A+ I +A D Sbjct: 176 SERDPYAHEHILPSQPLPLNPQQARALERIIAAMDGQQAKPSTASAGDMTPVSSSNNFRL 235 Query: 217 -------------FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIA 263 S +LL GVTGSGKTEVYL L + L QGK A+V+VPEI LTPQT+ Sbjct: 236 QSDDVPQTEPKNASSVFLLHGVTGSGKTEVYLQALAHALEQGKGAIVLVPEISLTPQTVE 295 Query: 264 RFRERFNAP-----VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIV 318 RF+ RF++ V VLHS L+ ER W K + G A IVIG RSA+F P LG+I+ Sbjct: 296 RFKARFSSGPLQTLVAVLHSHLSAGERHDEWHKIRQGRARIVIGARSAIFAPVDPLGLII 355 Query: 319 IDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLT 378 +DEEH+ +YKQ+E RYHARD+A+ R E ++LGSATP++E+ N + KY LL + Sbjct: 356 VDEEHEHTYKQEESPRYHARDVAIVRGRMEGATVVLGSATPSMESFYNCSRGKYILLEML 415 Query: 379 RRAGNARPAIQHVLDLKGQKVQA----GLAPALITRMRQHLQADNQVILFLNRRGFAPAL 434 R + + V+D++ + +P L ++Q L+ Q ILFLNRRG++ +L Sbjct: 416 ERVDAKKMPLVRVVDMRQAMRKGKSIPIYSPQLKEAIQQRLERKEQTILFLNRRGYSTSL 475 Query: 435 LCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP--SCGSTHLVPVGLGTE 492 C CG++A+CP C T H+ L CH C PVP CP CG+ + GLGTE Sbjct: 476 QCPLCGFVAQCPNCSVSLTYHRRAQILCCHVCGHTEPVPSFCPGPKCGNPDIRYAGLGTE 535 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E TL LFP I R+D DT +K + L + G IL+GTQM+AKG HFP+VT Sbjct: 536 KVEDTLLKLFPHARIKRMDSDTLKKKDDYRRILGDFRLGKIDILVGTQMIAKGLHFPNVT 595 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV ++ D AL ADFR+ ER QL TQVAGRAGR +GEV +Q+ P HP +Q Sbjct: 596 LVGIVYADMALHLADFRAGERTFQLLTQVAGRAGRGDIEGEVFVQSFTPFHPAIQYARRH 655 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 + F EQ L R ++ PP + ++ + N + L LR + + ++L + Sbjct: 656 DFAGFYEQELEFREQLKYPPVSRVAMLTLKGRNEEKVKLSADHLRRELEKALAGIKELII 715 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 GP PA + +R+QI+L+ + + ++ V +D+DP+ Sbjct: 716 AGPAPAPLARAESLYRYQIMLRARQMSEVSKRLAVMN---QSLSLPEDVSLSIDIDPVN 771 >UniRef50_Q47W07 Primosomal protein N' n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47W07_COLP3 Length = 736 Score = 788 bits (2035), Expect = 0.0, Method: Composition-based stats. Identities = 346/740 (46%), Positives = 459/740 (62%), Gaps = 16/740 (2%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP VA+PVP+ + F Y +PE + +K G RV V FG ++ IGIV+ + Sbjct: 1 MPEQYIQVAIPVPMRQLFTYRVPEALSSPAIKVGERVAVSFGPRKV-IGIVIDAQAQCDF 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 ++++K + L+ + S+ L A YYHHP+GDV ALPILLR+ +P Sbjct: 60 EISKVKDITTRLNDNFNLSQSLVSFLQLCAHYYHHPVGDVFQQALPILLRKIENITLSPP 119 Query: 116 WYWFA--TEQGQAVDLNSLKRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKK 171 W A + + L L++ +Q AL I ++ TL ++ A L AL+ K Sbjct: 120 MVWQAQCPSEDNSDLLAKLEKKAAKQFALYQIINNHNGISWVELRTLGYSKAQLNALQSK 179 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 L + W+ N +RL L++EQA V AI+ + FS L+ GVTGSGKT Sbjct: 180 ALIIEKEQVASQYTWQENTLNQADRLVLSSEQAIIVSAINHSLAQFSCHLIDGVTGSGKT 239 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL +E VLA +Q LV+VPEIGLTPQT+ RF +RFN P+ + HSGLND ERL+ WL Sbjct: 240 EVYLQSMEEVLANNQQVLVIVPEIGLTPQTLNRFEQRFNVPIALHHSGLNDKERLATWLS 299 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 A+ G AAIVIGTRSA+FTP LG+I+IDEEHDSS KQQ+ +RYH RD+A+ RA IP Sbjct: 300 AQQGSAAIVIGTRSAVFTPLHRLGLIIIDEEHDSSLKQQDSFRYHCRDMAILRARQLNIP 359 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRM 411 I+LG+ATP+ E+L N KY +L RAG + A ++D+ Q+V+ GL+ L M Sbjct: 360 IVLGTATPSFESLQNALSGKYSYHQLLNRAGKSNKAKIALIDMNQQQVEFGLSGTLKHEM 419 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +Q L QV+LFLNRRG+APA+ C +C W+AEC RCD YTLHQ Q L CHHC SQ+ Sbjct: 420 KQTLARGEQVLLFLNRRGYAPAINCQECHWLAECQRCDKPYTLHQKQQLLICHHCGSQKR 479 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 +P QCPSCGS + P+G GTEQLE L LFP I RIDRD+T +KG L + L EV Sbjct: 480 IPPQCPSCGSVRIAPLGQGTEQLESRLEELFPESSIVRIDRDSTRKKGELAKLLQEVTDK 539 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 ++L+GTQMLAKGHHFPDVTLVA+LDVDGALFS DFR++E+ AQL QVAGRAGRA K Sbjct: 540 KHQLLVGTQMLAKGHHFPDVTLVAVLDVDGALFSFDFRASEQMAQLLIQVAGRAGRASKP 599 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G+V++Q++ +HPLLQ L++ GY FA QAL ER+ LPP+T ++RA+ + + Sbjct: 600 GKVLVQSNFVDHPLLQDLVHNGYHHFAHQALTERKQALLPPFTFQALLRADANYPSYPEK 659 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 FL+ L E GPVPA K+ G++R+ +++Q SR L I L Sbjct: 660 FLRALTQ------RRLEGCEFAGPVPAAMEKKAGKFRYHLIIQAKSRKDLHRAILQLLIQ 713 Query: 712 INTIPDSRKVKWVLDVDPIE 731 I KV+W LD+DPI+ Sbjct: 714 IPNNEWQGKVRWSLDIDPID 733 >UniRef50_B1IIM2 Primosomal protein N' n=38 Tax=Clostridium RepID=B1IIM2_CLOBK Length = 735 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 225/739 (30%), Positives = 385/739 (52%), Gaps = 21/739 (2%) Query: 2 PVAHVALP---VPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDA-SE 54 A + + + L + F Y +PE + ++ G RV+VPFGK ++I G V+ + + + Sbjct: 3 KYAGIIVNNSSIKLDKLFTYAIPEELNKKIRIGHRVKVPFGKGNKKIDGFVLKLYENYED 62 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 +K++ + + +P+ + L+ + Y + + +P + +G Sbjct: 63 ENKVSIKSISNICEEDPLLDLNRVNLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKKEN 122 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV-ATLEFNDAALQALRKKGL 173 + + +G+ LK + +Q L G ++ + F+ +++ L K G Sbjct: 123 FIFIYKDLEGKY-----LKENYEQIYNFIKLNDGVYNKNVLNKKFGFSLSSINTLIKHGF 177 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 L + + + + E LN +Q+ A+ I ++ +L+ GVTGSGKTE+ Sbjct: 178 --LIQKNQVVNRYNEKIYGNYEEKILNGDQSLALYRILNS--NRKLFLIHGVTGSGKTEI 233 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ +++ ++ + K ++++VPEI LTPQ + RF+ RF + + HS L++ ER W++ K Sbjct: 234 YMHLVKKLIEKDKDSIILVPEISLTPQMVERFKGRFGKSIAIFHSKLSNGERFDEWMRVK 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GE + IG RSA+F PFKNLG I+IDEEH+SSYK +Y+ARD+A R +E +I Sbjct: 294 RGEVKVAIGARSAVFLPFKNLGTIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKVI 353 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP+LET + K L+ + R A ++D++ + + + L Sbjct: 354 LGSATPSLETYYRSKNKIIDLITIKERIEGASMPEVKIVDMREELMSGNKSIFSRELFED 413 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + L+ Q+ILFLNRRGF+ + C +CG++ +C CD T H + LRCH+C + Sbjct: 414 ISTRLEKKEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGAST 473 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 +P+QCP C S ++ G GTE++E+ + FP V R+D DTT K A E + Sbjct: 474 RIPKQCPKCNSKYVKYFGAGTEKVEKAIKKCFPKVKTLRMDLDTTRTKDAYENIYNTFKK 533 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G A ILIGTQM+AKG F +VTLV +L D +L D+RS ER QL TQV+GRAGR K Sbjct: 534 GEADILIGTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKK 593 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +G+V++Q+++PE+ + + Y+ F + + R+ M PP++ +++ Sbjct: 594 EGKVLIQSYNPENYSIASAAKSDYEGFYNKEIKIRKDMNYPPFSKILLINLSSKYENKLI 653 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 ++ ++ + + L +LGP P+ K +RWQI+L+ + I + Sbjct: 654 KNTHKVGIILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGDIMKEIQKIV- 712 Query: 711 LINTIPDSRKVKWVLDVDP 729 + ++ +D++P Sbjct: 713 YTSLEQVYNDIRVSIDINP 731 >UniRef50_Q31E46 Replication restart DNA helicase PriA n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31E46_THICR Length = 774 Score = 786 bits (2030), Expect = 0.0, Method: Composition-based stats. Identities = 330/774 (42%), Positives = 448/774 (57%), Gaps = 48/774 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEG----------MTVKA--------------GCRVRVPFGK 38 VA+P P DY + + ++ G RV+VPF + Sbjct: 2 FVKVAVPGPFLSPLDYRIQAEKADHRIETLALDLEPEEQTESKKSFLPVVGGRVKVPF-R 60 Query: 39 QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFH 98 + IGIV+++SD + + +LKA+ +V+D P+F+ LL WA+ YYH PIG+V+ Sbjct: 61 NKSLIGIVMALSDDATVATQKLKALEDVIDEMPIFSEQEMALLSWASHYYHEPIGNVVQT 120 Query: 99 ALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---IWRDQV 155 ALP LR+G A + W TE G+ D R+ +Q+ L+Q Sbjct: 121 ALPKRLREGEAVDVAGVSAWQLTEAGREADEQIPSRATQQKALWQLLQQQDEALTAEVLN 180 Query: 156 ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD 215 +L ++ ++KG ++ + + LN EQ AV A+ A Sbjct: 181 RSLNQWRLPMKRFQEKGWVAETEKSCLHAMPVREKTARPGHI-LNAEQQAAVDAVL-ATS 238 Query: 216 TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 F A+L+ GVTGSGKTEVYL ++E+V+AQGKQ LV+VPEIGLTPQT+ RF APV V Sbjct: 239 GFDAFLVEGVTGSGKTEVYLGMIESVIAQGKQVLVLVPEIGLTPQTVKRFEAYLQAPVAV 298 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRY 335 +HSGLND ER AW K + +++GTRSA+FTPF +LG+ ++DEEHD S+KQQ+G+RY Sbjct: 299 MHSGLNDKERHCAWSLVKTHQVNVLLGTRSAIFTPFADLGLCIMDEEHDLSFKQQDGFRY 358 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 ARD V RA E +P++LGSATP+LETL N +Y+ L L +RAG A+ +LD++ Sbjct: 359 SARDCLVRRAQLENVPVVLGSATPSLETLHNALSGRYQHLHLKQRAGQAKMPEVQLLDVR 418 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 GQ + G++ L + HL+A QV+LFLNRRGFAP L+CHDCGW A CP CD T H Sbjct: 419 GQAEEEGISQPLRQEVETHLKAGGQVLLFLNRRGFAPVLMCHDCGWQAACPSCDANMTFH 478 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 Q + LRCHHC Q P CP+CGS +G GTE+LE + FP + R+DRDTT Sbjct: 479 QQVNELRCHHCGYQAKAPLDCPNCGSASFAKIGQGTERLETVVQQWFPDYKVLRVDRDTT 538 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 KG + + +G A ILIGTQMLAKGHHFP VTLV LLD+D LFS DFR+AER A Sbjct: 539 RNKGQMMALTEQASQGRADILIGTQMLAKGHHFPKVTLVGLLDIDQGLFSCDFRAAERMA 598 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL QV+GRAGR + G+VV+QTHHPEHPLL+ L+ +GY+AFA++AL ER LPP+ Sbjct: 599 QLVVQVSGRAGRGERPGQVVIQTHHPEHPLLKVLVARGYEAFAKEALKEREQADLPPYQY 658 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLI------------------LSSPLADEKLWVLGPVP 677 V++RAE + FL +++ + + L V GPV Sbjct: 659 QVLLRAEAVDANAGWTFLNDVKSALNFAKMSMLRSYLSVNDSDDIKAEMLQGLEVFGPVS 718 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 A +R GR+R+Q+LLQ R L + + T ++KV+W LDVDP E Sbjct: 719 APMLRRQGRYRYQLLLQGAHRGFLHQWLAQVETQLYTSNQAKKVRWSLDVDPQE 772 >UniRef50_A4VTF2 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=106 Tax=Firmicutes RepID=A4VTF2_STRSY Length = 812 Score = 782 bits (2019), Expect = 0.0, Method: Composition-based stats. Identities = 260/797 (32%), Positives = 394/797 (49%), Gaps = 72/797 (9%) Query: 3 VAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASELP 56 +A + + VPL + + Y +P + +K G RV VPFGK I GIVV + D + Sbjct: 18 LAQIIVDVPLMQTDQAYSYRVPAELEEGLKVGVRVHVPFGKGNRLIQGIVVDLIDEDDEN 77 Query: 57 LNE-LKAVVEVLDSEPVFTHSV-------------------------------------- 77 + LK + EVLD PV Sbjct: 78 SLQDLKELAEVLDYSPVLNQEQFWLADQMRKSVFSYKITLLKSMLPSLLNSTYDKLIRPG 137 Query: 78 --WRLLLWAA-----------DYYHHPIGDVLFHA-----LPILLRQGRPAANAPMWYWF 119 + + D G ++ A L + + + WY Sbjct: 138 IGLEMAEQISLFGDKEQIRFSDLDVTEQGKIMRLAQSGKILVDYVAKDKKQIKTEKWYRV 197 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 E+ + D+++ + +Q + + + +++ L+ ++KG ++ E Sbjct: 198 CLEKLREADISNRAKKRQQLREFLLEQSEDQLLSNLK-SDYSADTLRYFQEKGYIEVWEE 256 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGSGKTEVYLSVL 238 + + + L LN EQA AV I ++ +LL GVTGSGKTEVYL V+ Sbjct: 257 EVSRTQGVFDKVEKTQALDLNPEQAIAVREIVASIGQESQTFLLQGVTGSGKTEVYLQVI 316 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 + VL GK A+++VPEI LTPQ RF RF V +LHSGL+D E+ W K + G A Sbjct: 317 DRVLKMGKTAIMLVPEISLTPQMTNRFISRFGQQVAILHSGLSDGEKYDEWRKIEAGNAQ 376 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 +V+G RSA+F P NLGVI+IDEEH+++YKQ RYHARD+A RA + ++LGSAT Sbjct: 377 VVVGARSAIFAPLTNLGVIIIDEEHEATYKQDSNPRYHARDVAKLRADYNRATLVLGSAT 436 Query: 359 PALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKG---QKVQAGLAPALITRMRQH 414 P+LET + Y L L +RA AR V+D + Q+ + P LI ++R+ Sbjct: 437 PSLETRARASRGVYGRLTLNQRANPLARIPEVEVVDFRDYIGQQEASNFTPVLIEKIREK 496 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L QV+L LNRRG++ ++C DCG + +CP CD TLH + CH+C Q+ +P+ Sbjct: 497 LARKEQVVLMLNRRGYSSFVMCRDCGSVDQCPNCDISLTLHMDTKTMNCHYCGFQKGIPQ 556 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP+C S + G GT++ L L P I R+D DTT +KGA E L RG A Sbjct: 557 TCPNCQSRSIRYYGTGTQKAYDELQELLPEARILRMDVDTTKKKGAHEDLLERFGRGEAD 616 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQM+AKG FP+VTLV +L+ D AL DFRS+ER QL TQVAGRAGRA K+GEV Sbjct: 617 ILLGTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGRADKEGEV 676 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT++P H + + Y+ F + R+ + PP+ V + + + Sbjct: 677 LIQTYNPNHYAIAFAKEQDYEGFYRYEMDIRKNLGYPPYYFTVGLTFSHKSEEFVVKKAY 736 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + + + +LGP P + + +QI+L++ RL+ ++N L Sbjct: 737 ETVAFLRQHLT--DAIQILGPTPKPIARTHNLYHYQIILKYRHEDRLEEVLNQILDWTQE 794 Query: 715 IPDSRKVKWVLDVDPIE 731 +++ ++ ++D +P Sbjct: 795 -RENQDLRLIIDNEPQN 810 >UniRef50_B5JTM7 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTM7_9GAMM Length = 731 Score = 781 bits (2018), Expect = 0.0, Method: Composition-based stats. Identities = 354/734 (48%), Positives = 460/734 (62%), Gaps = 17/734 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VA+PVPL FDY +P V +AGCR+++ FG + E IGI D +++ Sbjct: 9 RYVQVAVPVPLYGLFDYAVPADSRVPEAGCRLQLRFGHR-ELIGICCGTIDQPATAADKI 67 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + LDSEPV S+ LL A+ YYHHP+GDVL ALP L QGR W Sbjct: 68 REYQACLDSEPVIPASLMHLLQRASQYYHHPLGDVLATALPTALMQGRAVDEGGRSLWRL 127 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD---QVATLEFNDAALQALRKKGLCDLA 177 T+QG+ L +L+R+PKQ+ +A LR+ + D A E ++++AL +K + Sbjct: 128 TQQGREEPLEALQRAPKQRAIVAVLRESDGYCDAGSLSARFENWRSSVKALIEKEWLEAI 187 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S PE S LN EQ AV + S FS LL GVTGSGKTEVY Sbjct: 188 SLPPERSAVVR------PGPELNEEQRAAVDGVPSE-QGFSTTLLRGVTGSGKTEVYFRW 240 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 +E LAQG+QALV+VPEIGLTPQ + RF +RF A + VLHSG+ D ERL +W A G A Sbjct: 241 IERCLAQGRQALVLVPEIGLTPQLLERFSQRFEANLVVLHSGMTDLERLRSWQLAAAGRA 300 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+GTRSALFTP LG+IVIDEEHD+S+KQQEG+RYHARDLA RA +E IP+ILG+A Sbjct: 301 HIVLGTRSALFTPMPALGLIVIDEEHDASFKQQEGFRYHARDLAALRAQAEAIPLILGTA 360 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+ E+ NV+Q +YR LRL++RAG ARP I ++D + + + L+ +L + QHL A Sbjct: 361 TPSFESHHNVRQGRYRELRLSQRAGGARPPIIRMVDARQHRSGSPLSHSLDRAVEQHLAA 420 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 NQV+LFLNRRG+AP L+C CGW ++C RCD + TLH LRCHHC S++ P CP Sbjct: 421 GNQVMLFLNRRGYAPTLICPQCGWHSDCERCDAHMTLHFQPSVLRCHHCGSEQRPPPHCP 480 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG +L G GTEQL L FP ISRIDRD+T RKG+LE +L +V RG +L+ Sbjct: 481 SCGHRNLQHQGQGTEQLTMFLEERFPEATISRIDRDSTRRKGSLEAELKKVQRGEVDMLV 540 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLV +LD D LFSADF++ E AQL QVAGRAGRA K GEV++Q Sbjct: 541 GTQMLAKGHHFPSVTLVGVLDCDRGLFSADFKATEHMAQLILQVAGRAGRADKPGEVLIQ 600 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + P+HPL+ L+ +GY+AF +QAL ER+++ LPP+ ++RAE + A FLQ L Sbjct: 601 STQPDHPLMHCLITQGYEAFTQQALKERQVLGLPPFGFAALLRAESVEREAAMRFLQSLC 660 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 D + LGP+P+ +R GR+R Q+LL +R L ++ G + I Sbjct: 661 -----PASPDGDVQWLGPIPSPMERRAGRYRAQLLLLSQNRKALHVVLAGLVHTIQQQGS 715 Query: 718 SRKVKWVLDVDPIE 731 + V+W LDVDP Sbjct: 716 IKNVRWSLDVDPTN 729 >UniRef50_B0VLQ8 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=17 Tax=Acinetobacter RepID=B0VLQ8_ACIBS Length = 742 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 319/733 (43%), Positives = 440/733 (60%), Gaps = 11/733 (1%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASE--LPLNE 59 VA+PV L TFDY L + + G RV + FG+Q IGI+ D E + Sbjct: 14 VRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQN-LIGIITEKVDPQESFTGNFQ 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LKA+ E+LD EP+ V LL W+A YY PIG+V+ ALP LLRQG+P + W Sbjct: 73 LKAISELLDDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPM-DVLFHLWK 131 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 A L + + L + + A L+AL+KKGL D E Sbjct: 132 IIPCDNAEALLKRSIKQQDAYQILKLHPAGTTENILNLSGVETATLKALQKKGLVDCTLE 191 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +FS A L LN +Q A + +A + A+LL G+TGSGKTEVYL ++ Sbjct: 192 PHDFSPAPVQLAQM--PLTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGKTEVYLHIMH 249 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 VL QGKQ LV+VPEIGLTPQTI+RF+ RFN + +LHSGLNDS+RL AW +A+ G+A+I Sbjct: 250 EVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASI 309 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 ++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR H + P++LGSATP Sbjct: 310 ILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGCPVLLGSATP 369 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 ++++ V+ K L+L +RAG+A H++DLK K Q G++ LI +++ L Sbjct: 370 SIDSYHLVETGKLTALQLNQRAGHALLPKMHLIDLKIVKKQHGISQPLIEQIKNTLARKE 429 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQCPS 478 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P CP Sbjct: 430 QVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTVHRLPDHCPE 489 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C L +G GT ++E+ L LFP + R+DRD+TSR G+ ++ + + IL+G Sbjct: 490 CQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLG 549 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V LQT Sbjct: 550 TQMLAKGHHFPHVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQT 609 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+HPLL TL+ K Y A A+Q LAER++ LPP+ V++RAE + + FL + Sbjct: 610 LRPDHPLLTTLIEKDYRAVAKQTLAERKVALLPPYRYAVLIRAESKDRDYTLHFLNEAAE 669 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 + + + GP+PA ++ GR+R +++ R RL + A + P Sbjct: 670 QLRQIAGGI--VDIWGPIPAPMERKAGRYRAHMVILSADRTRLHFYLRQWWAQLVHAPRQ 727 Query: 719 RKVKWVLDVDPIE 731 +++ +DVDP E Sbjct: 728 HQLRLSIDVDPQE 740 >UniRef50_Q1YR42 Primosomal protein N' n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YR42_9GAMM Length = 744 Score = 781 bits (2016), Expect = 0.0, Method: Composition-based stats. Identities = 334/735 (45%), Positives = 472/735 (64%), Gaps = 11/735 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 + VA+ PL RTFDYL+ + + GCRVRV FGK+ E IG+V+ + S+ +++ Sbjct: 14 IVRVAVLSPLRRTFDYLVTDEFVAAPPQRGCRVRVSFGKR-EVIGLVIEQTHKSDFAIDK 72 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA-NAPMWYW 118 LK VV V+D+EP+ S+++L +WAA+YYHHPIGD LF+ALP+ LR G+ +W Sbjct: 73 LKPVVAVIDAEPLLPESLFKLFIWAANYYHHPIGDALFNALPVRLRLGQSLPLPKVTKWW 132 Query: 119 FATEQGQAVDLNSLK--RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 T+ G+ L+ R KQ+ L L + + R + A LQ + +KG+ +L Sbjct: 133 RVTDTGKERGQEMLRGGRLHKQRALLDELSKKSLTRQGNILKFYTRATLQRIEEKGIAEL 192 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 P+ D + + + L LN Q A+ AI F+ WL+ GVTGSGKTE+YL Sbjct: 193 VCIGPQEVDL--DNLLLEQPLSLNPSQQEAMDAI--DCHGFNTWLIDGVTGSGKTEIYLQ 248 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +E V+ G+QALVM+PEI LTPQT RFR+RFN V ++HSGL D ERL +W +A G+ Sbjct: 249 CIEKVIRYGRQALVMIPEISLTPQTEKRFRDRFNVEVAMMHSGLTDQERLESWTEAATGQ 308 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 AAI++GTRSA+FTP KN G+I+IDEEHD SYKQQ+G+RY ARDLAV RA E+IPIILGS Sbjct: 309 AAILLGTRSAVFTPMKNPGIIIIDEEHDQSYKQQDGFRYSARDLAVIRAKQEKIPIILGS 368 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+L N ++K+Y+ L L+ RAG+A+P ++DLK ++V++G+A + + +R+ + Sbjct: 369 ATPSLESLHNCEKKRYQHLILSTRAGDAQPPTWSMVDLKSEQVESGVAASTLNAIREAIH 428 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 QV++FLNRRGFAPA+LCH CG+ AECP CD T+H+ L CHHC+ +R + C Sbjct: 429 NKQQVLVFLNRRGFAPAMLCHYCGFCAECPNCDARLTVHRRHQRLICHHCNYKRGLLHWC 488 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 PSC +V G GTE+ E L FP P+ R+DRDTT +K A++ V G IL Sbjct: 489 PSCRGDRMVAAGDGTERSEAWLQECFPDTPVLRVDRDTTRKKNAMQAMYDTVDSGAPCIL 548 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGHHF ++TLVA+LD D LFS DFRS ER QL TQVAGR+GR G+V+L Sbjct: 549 VGTQMLAKGHHFANITLVAVLDADSGLFSPDFRSHERLGQLLTQVAGRSGRGKMAGKVIL 608 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 Q+H P+HPLL+ L + Y ++ +R+ +LPP+ ++VRA+ + Q+A FLQ Sbjct: 609 QSHQPDHPLLEVLTQQSYGEYSTLLRKQRKQAELPPFKQLILVRADAAHAQNAEAFLQSA 668 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 R + + E + LGP+PAL +R R R+ + + R L +++ + + +P Sbjct: 669 RQCAEAIFPSGETVNYLGPLPALMERRNSRHRYVLQISGGRRSDLNFLLSQLVFELEKLP 728 Query: 717 DSRKVKWVLDVDPIE 731 +R V+W +DVDP E Sbjct: 729 MARHVRWGVDVDPQE 743 >UniRef50_C6P2J4 Primosomal protein N' n=2 Tax=Betaproteobacteria RepID=C6P2J4_9PROT Length = 739 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 307/744 (41%), Positives = 442/744 (59%), Gaps = 19/744 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 MP+ VAL VPL FDY++ E M ++ G RV VPF ++++ +G+ + + L ++ + Sbjct: 1 MPIIRVALDVPLSTLFDYVVSEEMRLEIGQRVVVPF-RRKQALGVAMEWVQETALAVDRI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V +VLD P + LL + +DYYH+P+G + ALP LR P + Sbjct: 60 KPVTQVLDDVPPLPQELLALLRFCSDYYHYPLGMTVLAALPTRLRAVEPITVKQALDYTL 119 Query: 121 TEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLEFND-AALQALRKKGLCDLAS 178 + G+A+D+ +L KR QQ+ L ALR + Q+ TL + AAL++L + G + + Sbjct: 120 SAAGRALDIATLPKRRVVQQRILQALRLAPLSGAQMRTLSPSAPAALKSLLEAGWVECVA 179 Query: 179 ET--PEFSDWRTNYAVSGER-------LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSG 229 P + + E+ L EQ AV A+ + +LL G+TGSG Sbjct: 180 RKAGPLSNSLPQAGERTNEKGNLLLGAHALTDEQQQAVDAVTQQKG-YGCFLLHGITGSG 238 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSA 288 KTE+Y+ ++ +L + Q L++VPEI LTPQ FR RF + LHSGL D ER Sbjct: 239 KTEIYVHLMHEMLQRSGQILLLVPEINLTPQLENYFRSRFPDVDLVSLHSGLADGERAQN 298 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 WLKA++G+A IV+GTR ++F P L +I++DEEHD S+KQQ+G RY ARD+A++RA+ Sbjct: 299 WLKAQSGDARIVLGTRLSVFAPLPKLSLILVDEEHDPSFKQQDGLRYSARDVAIFRANQR 358 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGLAPAL 407 +PI+LGSATP+LE+ N Q +Y+LL+LT+RA A + +D+ +Q GL+ L Sbjct: 359 GVPIVLGSATPSLESWFNAQSGRYKLLKLTQRAVQPATLPVVRCMDITKLPLQDGLSEPL 418 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 +T + LQ Q ++F+NRRG+AP L+C CGW++EC C LHQ LRCHHC Sbjct: 419 LTAIETRLQRKEQSLIFINRRGYAPVLMCTSCGWLSECKHCAGKLVLHQKDRSLRCHHCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 +Q+ VP CP+CG L PVG+GT++LE+TL FP I R+DRD+T KGA + Sbjct: 479 AQQRVPNACPTCGDADLKPVGIGTQRLEETLQTRFPNARILRVDRDSTRNKGAWSAMRKQ 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 +H G A ILIGTQMLAKGH FP++TLV ++ DGAL+SADFR++E+ TQV GRAGR Sbjct: 539 IHDGEADILIGTQMLAKGHDFPNLTLVGVISPDGALYSADFRASEKLFAQLTQVGGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 A K GEV++QT P HPL Q L Y+ +A+ LAER+M PP+ ++ AE Sbjct: 599 ADKAGEVIMQTAFPNHPLFQALRAHNYEIWAQTLLAERQMAGFPPFVYQALLSAEGKQES 658 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A FL+Q R+ + + + V G VPA PKR R Q+L+Q R L + Sbjct: 659 DAYNFLKQARSAAMELHMP---VEVYGVVPAAMPKRANHHRAQLLVQSDKRKALGEFLRA 715 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 +++ +P + ++WVLDVDP+E Sbjct: 716 WKPILDALPAGK-LRWVLDVDPME 738 >UniRef50_C5BRK6 Primosomal protein N' n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRK6_TERTT Length = 739 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 343/735 (46%), Positives = 459/735 (62%), Gaps = 10/735 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 VALPVPL TFDY LP A GCRV V FG Q +GI++S S + Sbjct: 8 FISVALPVPLRNTFDYRLPTEADPTANYMGCRVAVNFGHQ-AMVGIILSCHQTSTYDPAK 66 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + A +E+LD +P+FT + L WAADYY HP+G+ L A+P LRQG+ +A + W Sbjct: 67 IVAALEILDHKPLFTAELLNLCWWAADYYQHPLGETLSTAMPTPLRQGKSSAPT-LAAWQ 125 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ-VATLEFNDAALQALRKKGLCDLAS 178 T +G+ + +LKR+ KQQ AL L D L+ N + A++KKGL + Sbjct: 126 LTTEGKGLPETALKRAKKQQIALQYLLHNDFLLDADARKLDINSTTMAAMQKKGLVEKVE 185 Query: 179 ETPEFSDWRT--NYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 PE + + + L L EQ A+ + + ++ +LL G TGSGKTE YL Sbjct: 186 RVPEHQAPKDAADQLLRESPLALTEEQEAALSQL--SFHRYTCYLLEGATGSGKTEFYLQ 243 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + L GKQALV++PEIGLTPQT+ARF +RF V LHS ++DS+R + WL A++G Sbjct: 244 AIARTLQAGKQALVLIPEIGLTPQTVARFEQRFACSVAELHSNVSDSQRTNNWLAARDGR 303 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IVIGTR A P ++LG+I++DEEHD S+KQQ+G RY ARDL++YRA+ QIPI+LGS Sbjct: 304 ARIVIGTRLASLCPMQDLGIIIVDEEHDLSFKQQDGLRYSARDLSIYRANQLQIPIVLGS 363 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP+LE+ N ++ LRLTRRAG A+P +DL+G+ + AGL A + + + ++ Sbjct: 364 ATPSLESFYNAIHGRFAHLRLTRRAGAAKPPTISRVDLRGKTLTAGLCDASVAVLEKTIE 423 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 Q I+F+NRRG+AP+LLCH CGWIAECP CD TLH+A +HL CHHCD+Q+PV R C Sbjct: 424 RGQQAIVFVNRRGYAPSLLCHHCGWIAECPSCDANLTLHKAPYHLHCHHCDAQKPVNRHC 483 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P C S L P GLGTEQ EQ L FP PI RIDRD+T +K +L++ LA V G IL Sbjct: 484 PQCNSPDLNPRGLGTEQTEQWLEERFPDTPIIRIDRDSTRQKNSLQETLAVVKSGKPCIL 543 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 IGTQMLAKGHHFP++ LV + D D L SAD+R ER AQL QVAGRAGR G+V++ Sbjct: 544 IGTQMLAKGHHFPNIALVVIADCDQGLMSADYRGPERMAQLVIQVAGRAGRGEIPGQVLI 603 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 Q+H P+HPLL LL KGY FA Q L ER+ LPP+T ++RAE Q+A FL+ Sbjct: 604 QSHSPDHPLLDLLLTKGYHLFARQLLNERQTAFLPPFTHQCLIRAESKRPQNAIDFLKMA 663 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 R + S ++L LGP+PA + R+R+Q+ + SR LQ ++ + I+ Sbjct: 664 RQQLSSLMPPSQQLQYLGPIPARMERVNERFRYQLHITAGSRKALQKLLKEGIEKIDQQA 723 Query: 717 DSRKVKWVLDVDPIE 731 +R+ +W +DVDP E Sbjct: 724 LARRTRWSVDVDPQE 738 >UniRef50_A5IS97 Replication restart DNA helicase PriA n=53 Tax=Staphylococcaceae RepID=A5IS97_STAA9 Length = 802 Score = 779 bits (2013), Expect = 0.0, Method: Composition-based stats. Identities = 256/801 (31%), Positives = 393/801 (49%), Gaps = 76/801 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASE--L 55 +A V + V + FDY++PE + ++ G RV VPFG + + G V+ V+ + L Sbjct: 2 IAKVIVDVASKSVDYKFDYIIPEQLESVIQPGVRVIVPFGPRTIQ-GYVMEVTAEPDAQL 60 Query: 56 PLNEL------KAVVEVLDSEPV------------------------------------- 72 +++L K + L SE + Sbjct: 61 DVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISMLEVMLPSAIKAKYKKAFKMK 120 Query: 73 ----FTHSVWRLLLWAADYYHHP---------IGDVLF--HALPILLRQGRPAANAPMWY 117 ++ + YY+ + +L + Sbjct: 121 DDIELPSALLQKFDKHGYYYYKDAQKNNDIQLLMKLLKDDIVEEKTILTQNITKKTKRAV 180 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAA---LRQGKIWRDQVATLEFNDAALQALRKKGLC 174 L L++ KQ A + I+ + + F+ ++L L KKG Sbjct: 181 RVIEGYHPDEVLAKLEKVIKQYDLYAYLSEEQHKTIFLTDIEDMGFSKSSLDGLIKKGYV 240 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTE 232 + E ++ + +L +Q A AI + +LL GVTGSGKTE Sbjct: 241 EKYDAVVERDPFKDRVFEQESKQQLTEDQYKAYEAIKAKIVSQEQETFLLHGVTGSGKTE 300 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VYL +E+VL+QGKQA+++VPEI LTPQ + RF+ RF V VLHSGL++ ER W K Sbjct: 301 VYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSNGERYDEWQKI 360 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 ++ A + +G RS++F PFKNLG+I+IDEEH+S+YKQ++ RYHAR++A +R+ P+ Sbjct: 361 RDDRARVSVGARSSVFAPFKNLGLIIIDEEHESTYKQEDYPRYHAREIAQWRSEYHHCPV 420 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 ILGSATP LE+ ++ Y LL L R ++D++ + + + L Sbjct: 421 ILGSATPCLESYARAEKDVYHLLSLPNRVNQQALPEIDIVDMREELSEGNRSMFSKDLRE 480 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ L QV+LFLNRRG+A +LC DCG++ +CP CD T H+ L+CH+C Q Sbjct: 481 AIQLRLDRQEQVVLFLNRRGYASFMLCRDCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQ 540 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 P QCP+C S H+ VG GT+++E+ L F I R+D DTTS+KGA E+ L E Sbjct: 541 ETPPNQCPNCESEHIRQVGTGTQKVEELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFE 600 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 +G IL+GTQM+AKG +P++TLV +L+ D L DFR++ER QL TQVAGRAGR Sbjct: 601 KGNGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLTQVAGRAGRHE 660 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 K G+V++QT++P+H + + Y F Q + R++ + PP+ + + Sbjct: 661 KAGQVIIQTYNPDHYSILDVQKNDYLTFYRQEMEYRKLGKYPPYYYLINFTISHKEMKKV 720 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q + ++L EK VLGP PA + +R+QIL+++ S L I Sbjct: 721 MEASQHVHKILLQHLT--EKALVLGPSPAALARINNEFRFQILVKYKSEPGLLQAIQFLD 778 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 + K+ +D+DP Sbjct: 779 DYYHEKFIKEKLALKIDIDPQ 799 >UniRef50_B2A2K0 Primosomal protein N' n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A2K0_NATTJ Length = 749 Score = 779 bits (2011), Expect = 0.0, Method: Composition-based stats. Identities = 247/756 (32%), Positives = 385/756 (50%), Gaps = 34/756 (4%) Query: 1 MPVAHV-ALPV---PLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASE 54 M HV L + L R F Y + + + G V+VPFGK+ +V V+ + Sbjct: 1 MKYCHVTILDIVSDELDRQFTYKITPHLESRVTRGSLVKVPFGKRNVN-AVVNEVTGTTS 59 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 L +++K V +VL +P + L W + YY + +P L+ G Sbjct: 60 LSKDKIKNVNQVLSDQP-LPEDIMELAQWMSSYYLCSLSKAYNIMVPQGLKSGVN--RIY 116 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKG 172 Y + +A L ++PKQ++ L L + L+ + +++L KG Sbjct: 117 KKYVSIADITEARKLLDSAKAPKQRKVLERLLSNSPLALDQLLDELKITKSPVESLYGKG 176 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS---------AADTFSAWLLA 223 + ++ S + Q T + I + + +LL Sbjct: 177 IINIQSSRSYREPIDFKQIEEYKPKEPTQAQKTVLKLIKNQGRGSCDNTSPKKPKPFLLF 236 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKTE+YL ++E+ L QG Q +V++PEI LTPQTI RF RF V V HS L+ Sbjct: 237 GVTGSGKTEIYLQLIESYLQQGLQTIVLIPEISLTPQTIERFVGRFGNQVAVTHSKLSHG 296 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 ERL W K G+A IV+G RSA+F PF NLG+I+IDEE + SYKQ+E RYHAR++A Sbjct: 297 ERLDQWEKMLWGKANIVVGPRSAVFAPFSNLGLIIIDEEQEGSYKQEELPRYHAREVAER 356 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG- 402 R + ++LG+ATP+LE++ V+ Y L L R G+ V+D+K + + Sbjct: 357 RCQFKDGQLLLGTATPSLESIHRVKSDDYNLAELPERVGDVELPDISVIDMKEEFQKGNK 416 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 + LI ++++ Q ILFLNRRG++ LLC +CG+ CPRC+ T H++ + Sbjct: 417 SVFSRELILKLKEVTDKGEQTILFLNRRGYSTFLLCRECGYTVTCPRCEVTLTYHKSINQ 476 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L CH+CD P+ + CP C S + G GT+++E+ L P + R+D DTT +K + Sbjct: 477 LLCHYCDYTEPLSKFCPDCNSDKIKEFGTGTQKIERELKKYLPDLKTIRMDVDTTRKKNS 536 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 ++ L + A +LIGTQM+AKG FPDV+LV ++ D AL DFR+ E+ QL TQ Sbjct: 537 HQELLGKFKNKQANVLIGTQMIAKGLDFPDVSLVGIITADTALNLPDFRAGEKTFQLLTQ 596 Query: 581 VAGRAGRAG--KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 VAGRAGR ++G+VV+QT++P+H ++ + + F + LA R+ + PP+ + Sbjct: 597 VAGRAGRRDNNQRGQVVIQTYNPDHYSIEAVKNENVRKFTGEELALRKKLGYPPFKRMIR 656 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ--HP 696 + Q +++L + D VLGP P PK +RW ++L+ Sbjct: 657 IMLRSPYEQAVSHQVEELSQKLQ-----DMGYEVLGPTPCPIPKIKDEFRWHLMLRLDLN 711 Query: 697 SRVRLQHIIN-GTLALINTIPDSRKVKWVLDVDPIE 731 ++ + + L N + K++ +DVDP+ Sbjct: 712 NQEIIDEQLRDYLLTTKNNLSQQGKIRMAIDVDPLN 747 >UniRef50_Q1PXH1 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXH1_9BACT Length = 762 Score = 777 bits (2008), Expect = 0.0, Method: Composition-based stats. Identities = 241/743 (32%), Positives = 387/743 (52%), Gaps = 23/743 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A V +PL + F Y +P + + G RV+ PFG + G V ++ + + Sbjct: 23 FAEVVFNIPLNKLFHYSVPPDLRELLTPGMRVKAPFG-NKVITGFCVGLTTIP--SVYKT 79 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY--W 118 K ++ +LD+ P+ ++ R+ W + YY G+ + +P ++R+G Sbjct: 80 KDLMGILDAFPLADETMLRITKWLSSYYCCGWGEAIHAVIPPVVRRGAKEKIDIFVTCGK 139 Query: 119 FATEQGQAVDLNSLKRSPKQQQAL-----AALRQGKIWRDQVATLEFNDAALQALRKKGL 173 T + L S KR+ KQ + L A +D + N + L+ L ++ L Sbjct: 140 PLTAFEKETILQSKKRAIKQARVLEFLFNQAQNTEIRAKDLMKATGGNMSMLRQLERENL 199 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKT 231 L + + S + L L+ EQ A I S LL G+TGSGKT Sbjct: 200 LRLEERQADAVNALKGGGASRQHLALSEEQQAAFTLIKEKLSEPSQGIILLHGITGSGKT 259 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 E+YL + +L QGK+AL +VPEI LT Q+I R +ERFN V VLHS L + + W Sbjct: 260 ELYLQTIAKLLEQGKKALFLVPEISLTSQSIQRIKERFN-NVAVLHSHLQGAFHHAQWKD 318 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 K G +V+G RS++F P K++G+I++DEEH+++YKQ+ RY+ARD+A+ RA E Sbjct: 319 IKEGRVDVVVGARSSIFAPLKDVGLIILDEEHENTYKQENSPRYNARDIAILRATYENAM 378 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPAL 407 +ILG+ATP+LE+ ++ Y + L++R G + ++D+ + + ++ L Sbjct: 379 VILGTATPSLESYYEAEKGDYTKIVLSKRIGTLQLPQVEIVDMLEEVRKKRGYHVVSQRL 438 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 M+Q L QVILFLNRRGF P + C CG++ +C RCD T H+ + + CH+C Sbjct: 439 EYYMKQALSRREQVILFLNRRGFTPYIHCKRCGFVLKCHRCDIPLTFHKKLNIVLCHYCH 498 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++ P CP C + ++ G GTE++E+ +A FPG I R+D D+ G+ E+ L Sbjct: 499 AEAIPPESCPDCMANYINYRGFGTEKIEEVIAKKFPGYNILRMDSDSMRSHGSHEKALKA 558 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G +IL+GTQM+AKG FP+VTLV ++ D L DFR+ ER QL +QVAGR GR Sbjct: 559 FGEGEFQILLGTQMIAKGLDFPNVTLVGVISADTMLNLPDFRAGERTFQLISQVAGRTGR 618 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 K G V++Q+ +P H + Y+ FA++ L RR + PP+ + + + Sbjct: 619 GQKGGRVIVQSFNPRHYSITYAAAHDYEGFAKKELEYRRPLNYPPFGRMARIIFRGASEK 678 Query: 648 HAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + + + + ++ +L +LGP PA K +RW +LL+ R+ + Sbjct: 679 NTEEKASVIAGKLKEIAKESNNQLQILGPSPAPVMKINNLFRWHLLLKAKDHQRIHDAL- 737 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 L + +T+ ++ V+ ++DVDP Sbjct: 738 --LCVADTLKPTKGVQSLVDVDP 758 >UniRef50_A1TYV0 Replication restart DNA helicase PriA n=3 Tax=Marinobacter RepID=A1TYV0_MARAV Length = 723 Score = 777 bits (2007), Expect = 0.0, Method: Composition-based stats. Identities = 318/729 (43%), Positives = 439/729 (60%), Gaps = 15/729 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 A +AL PL R FDY +PE MTV G RV+VPFG +Q G+VV LK + Sbjct: 7 ARIALNRPLRRLFDYRIPETMTVSPGQRVKVPFG-RQTLTGLVVETGVTPP-DGITLKPI 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +EVL+ + ++LL WA+DYY HP+G+ LF ALP LR+GRP+ +W Sbjct: 65 LEVLEPWLALPAATFQLLSWASDYYQHPLGECLFTALPPALRRGRPSQQKQDEHWQ---- 120 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGK-IWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 G + +Q+ L A+++ I ++ FN +++L KGL +L Sbjct: 121 GTQNIAPLPANAHRQKALLEAIQRAPGISTGELVKAGFNRTQIKSLHDKGLIELTEPQLP 180 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + A + E L+ Q A + A D FSA LL G+TGSGKTE+YL L+ L Sbjct: 181 ACN---QTAGTVEGPELSPAQLAAAKDLPQATDRFSATLLYGITGSGKTELYLHYLKQQL 237 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 +QAL++VPEI LTPQT+ARFR F + + HS LND ERL WL+ +NGE I+IG Sbjct: 238 QADQQALILVPEINLTPQTLARFRRYFGSRIVAWHSALNDGERLDTWLRIRNGEPVILIG 297 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+ PF NL I++DEEHDSSYKQ EG+RY RD+AVYRAH + P+ILGSATP+LE Sbjct: 298 TRSAVLLPFTNLRAIIVDEEHDSSYKQGEGFRYSGRDVAVYRAHLNKCPVILGSATPSLE 357 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 + N +Q KY L+RL +RAGNA P +LD++ + ++AGL+ + +++ L Q + Sbjct: 358 SWHNARQGKYHLIRLEQRAGNALPPEVALLDIRSRPLEAGLSRPTLNAIKEVLTRGEQAL 417 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 +F+NRRGFAP ++C DCG + ECPRCD T H+ +RCHHCD Q CP C S Sbjct: 418 VFVNRRGFAPIMMCFDCGHMEECPRCDTRLTYHRRDRAMRCHHCDFQMAASHTCPKCRSE 477 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 + PVG GTE+ E+TLA FP PI R+DRD+T RKG+++ LA+V+ G IL+GTQML Sbjct: 478 NFKPVGQGTERTEETLAEQFPDTPIVRVDRDSTQRKGSIQGILAKVNSGEPCILVGTQML 537 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGH FP+VTLV +++ DG LFS DFR+ E+ Q QV+GRAGR K G+V++QT H + Sbjct: 538 AKGHDFPNVTLVTVVNADGGLFSVDFRAPEQMVQTLLQVSGRAGRGEKPGKVLIQTCHSD 597 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPLL++L Y A A+Q L ER+ LPP+ + I+RAE Q + L + Sbjct: 598 HPLLKSLCQGNYAALADQLLTERQTGALPPFRAMAILRAEADTMQASLQLLDSI-----K 652 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 A + GP+PA+ ++ R R Q++L R +L H++ ++ K Sbjct: 653 PKTAANGIETWGPLPAVIARKADRHRAQLILCSNHRRQLNHLLTHVCQYLDQCKLPASTK 712 Query: 723 WVLDVDPIE 731 W++DVDP E Sbjct: 713 WIVDVDPQE 721 >UniRef50_Q67PR6 Primosomal replication factor Y n=1 Tax=Symbiobacterium thermophilum RepID=Q67PR6_SYMTH Length = 741 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 248/733 (33%), Positives = 359/733 (48%), Gaps = 20/733 (2%) Query: 13 PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 + F YL+P + + G VRVPFG ++ +G+ V ++ LK + +L Sbjct: 11 DKLFTYLVPRSLAGRLTPGQWVRVPFGGRR-LVGLYVGPAERPP-EGVALKEIAGLLPDI 68 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P + +L W AD Y L LP R+ Y + +A+ Sbjct: 69 PPIPAPLVQLARWTADRYLSTFPAALRLLLPTEARRQEVRTLTITNYRLNVDDVEALVSE 128 Query: 131 SLKRSPKQQQALAALRQGKIWRDQVATL----EFNDAALQALRKKGLCDLASETPEFSDW 186 +R+P+Q + LA + + ++ L E ++ +KG + Sbjct: 129 LRRRAPRQAELLAYMARVGGEAERAQVLADLGESIAGPIRVALEKGWLTAGRVARRRDPF 188 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTF----SAWLLAGVTGSGKTEVYLSVLENVL 242 + L EQ A+ +I L+ GVTGSGKTE+YL + V Sbjct: 189 ADEHVEPAPPPVLTPEQEQALASIRQELIAPPAFRQPVLVHGVTGSGKTELYLRAIALVR 248 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 GK A+ +VPEI LTPQ I RFR RF V VLHS L+ ER W + + GE +IV+G Sbjct: 249 EMGKNAICLVPEISLTPQMIQRFRARFGGDVAVLHSALSAGERFDEWQRIRRGEVSIVVG 308 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR-YHARDLAVYRAHSEQIPIILGSATPAL 361 RSA+F PF+N+G+I+IDEEH+ SYKQ+ YHAR++A RA E ++LGSATPAL Sbjct: 309 ARSAVFAPFENVGLIIIDEEHEQSYKQEAPPPAYHAREVAAERARLEGALLVLGSATPAL 368 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQAD 418 E+ Q YRL+ L R N ++D++ + + AL+ + Q L A Sbjct: 369 ESFHLAQTGVYRLVSLGHRIDNRPLPPVTLVDMREELRAGNRSIFSRALVEALDQTLSAR 428 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLNRRG+ ++C CG +C C T H HL CH+C PVP CPS Sbjct: 429 EQAILFLNRRGYNTFIMCRSCGEAIQCVHCAVALTYHLGDDHLACHYCGYTAPVPLVCPS 488 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CGS + +G GTE++EQ L L+P V ++R+D DTT RKGA L +L+G Sbjct: 489 CGSDKIRHLGAGTERVEQELQRLYPHVRVARMDVDTTRRKGAHAAILKRFADHEVDVLVG 548 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+ KG FP VTLV ++ D +L DFR+AER QL TQVAGRAGR + G V++QT Sbjct: 549 TQMITKGLDFPGVTLVGVVLADTSLNLPDFRAAERTFQLVTQVAGRAGRGDRPGRVIVQT 608 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + P+H LQ Y F + + R+ + PP+ + + + Q + Sbjct: 609 YQPDHAALQAAAEHDYHRFFAEEIRFRQELDYPPFAHMIHLVISGEDEAAVAATAQNVHR 668 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN-TIPD 717 ++ +LGP PA K G++R+ ++L+ P + + A Sbjct: 669 VLAEGGFGG---QILGPAPAPLAKLRGKYRYHLVLKGPDVRAMAAEVKACFAAARGKWRA 725 Query: 718 SRKVKWVLDVDPI 730 SR V +DVDP+ Sbjct: 726 SRSVSLSVDVDPV 738 >UniRef50_B2ULA1 Primosomal protein N' n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULA1_AKKM8 Length = 738 Score = 776 bits (2005), Expect = 0.0, Method: Composition-based stats. Identities = 265/739 (35%), Positives = 385/739 (52%), Gaps = 17/739 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M A + + DY +P VK GCRV+VP + + G V+++S+ + + Sbjct: 1 MQAARILVDGQSDLVLDYGIPPEAGDVKPGCRVQVPL-RNRTATGTVLTLSEPAPAWKDR 59 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK +++++D EP+ + + L WAADYY + ++ LP +RQ A + Sbjct: 60 LKPILKLIDPEPLISPVMMNLASWAADYYSVALDQMIRCLLPETVRQENTAEKMRKMVYL 119 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFND-AALQALRKKGLCDLAS 178 + +++P+Q Q L K +A ++L KG L Sbjct: 120 EKTPAREELDALYRKAPRQAQMLDYFSSAKQQSAPLAAFGAGALNVARSLEAKGFISLKE 179 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLS 236 E V + ++LN++Q A+ I + AA+ LL GVTGSGKTEVYL Sbjct: 180 EAVHRDPSTGEQFVPTQPMKLNSQQQKALEEITAMCAAERKKPVLLQGVTGSGKTEVYLQ 239 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERF---NAPVEVLHSGLNDSERLSAWLKAK 293 + ++ GK AL+MVPEI LTPQT+ RF+ RF + V VLHS L+D ER W + Sbjct: 240 AVSQIVKSGKSALIMVPEISLTPQTVQRFKSRFAELPSSVAVLHSLLSDGERFDEWHAIR 299 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 +G+A IVIG RSA+F P +NLG++++DEEHD+SYKQ+ RYH RDLAV RAH E ++ Sbjct: 300 SGKARIVIGPRSAVFAPLQNLGLVIVDEEHDASYKQESSPRYHGRDLAVLRAHLENCAVL 359 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALIT 409 LGSATP+LE++ N KY L++LT RA + + +LD+K + ++ L Sbjct: 360 LGSATPSLESIHNALIGKYSLVKLTERADGQQLPLIRILDMKTEGRNKSGPNVISERLRM 419 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + + L QVIL LNRRGFA ++ C DCG + C C T H+ + L CH C + Sbjct: 420 SIDRRLDKGEQVILLLNRRGFARSIQCPDCGHVVTCLHCSLPLTYHRTEDRLMCHLCGFK 479 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 PR CP C S +++ G GT+++E+ L FP I+R+D D RK A+ L + Sbjct: 480 ALPPRSCPECRSANILLQGYGTQKVEELLRRTFPAARITRVDADVARRKNAVRTILNQFR 539 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 IL+GTQM+AKG FP+VTLV +L+ D L D R+ ER QL TQVAGRAGR Sbjct: 540 AHKIDILLGTQMIAKGLDFPNVTLVGVLNADLGLHIPDPRAGERTFQLLTQVAGRAGRGD 599 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV++QT P+ P LQ + D FA Q L RR LPP+T ++ + A Sbjct: 600 LSGEVIIQTFTPQSPSLQYARHHDTDGFAAQELEMRRTFDLPPFTHIAVLTIRSQHESMA 659 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q L + + P+PA P+ G++R+QI ++ PS L + + Sbjct: 660 EFATQTLAARLRGMLPPPATMT--DPMPAPIPRAHGQFRFQITVKGPSARILSRTLRKLV 717 Query: 710 ALINTIPDSRKVKWVLDVD 728 + V+DVD Sbjct: 718 QEAG---LGEDLTAVIDVD 733 >UniRef50_B8FS82 Primosomal protein N' n=3 Tax=Desulfitobacterium hafniense RepID=B8FS82_DESHD Length = 775 Score = 773 bits (1996), Expect = 0.0, Method: Composition-based stats. Identities = 237/776 (30%), Positives = 377/776 (48%), Gaps = 49/776 (6%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SEL 55 M A V + V L + F Y +PEG+++K G RV VP +Q + G+VV +++ E+ Sbjct: 1 MHYAEVLVDVANRRLDQVFHYQIPEGLSLKRGMRVLVPLQYRQVQ-GVVVRITEQLPQEI 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + LK ++ ++D+ V + L LW A+ I L P L +G+ Sbjct: 60 AHSALKPILGIVDTMYVVPEDLVDLALWLAETTICSIAQSLHTVWP--LLKGKVEEYVIP 117 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 E +A+ + + + + + + ++ L K+G Sbjct: 118 MASQEDEDVKALKILDSETYQALAVIFRSRNKTLPLSTYLKRSGLSKTQVEHLAKQGWLK 177 Query: 176 LASETPEFSDWRTNYAVSGERL--------------------------------RLNTEQ 203 L S + A++ E L EQ Sbjct: 178 LESRFTSGVPRKVQAALTPEERVGDDLGDRESMTGMMHEADIELNVHQGPDYLRTLTPEQ 237 Query: 204 ATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 + A D + LL GVTGSGKTEVY ++ VL +G A+++VPEI LT Q Sbjct: 238 GKVCEKVTQALDKQSYETLLLHGVTGSGKTEVYQRLIGEVLVKGGSAILLVPEISLTSQI 297 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 F+++F + VLHSGL E+ AW G+ IV+G RSA+F P +L +I++DE Sbjct: 298 ARYFQDQFGEQLIVLHSGLQVGEKAKAWQDILQGKIRIVVGARSAVFAPLPDLRLIILDE 357 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA 381 EH+S+Y Q+E +YHAR++A R + ++LGSATP+LE Q K LL + R Sbjct: 358 EHESAYHQEENPKYHARNVARKRMEQLRGVVLLGSATPSLEAYAAAQTGKVPLLTMEERV 417 Query: 382 GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHD 438 V+D++ + ++ + +L ++++ L+ Q +LFLNRRG++ ++C + Sbjct: 418 NRRPLPPVEVVDMREELIKGNRSMFSLSLQDKLKRTLERGEQSMLFLNRRGYSTFVVCRE 477 Query: 439 CGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTL 498 CG++ C CD T H H +RCH+C+ + PR CP CGS ++ G GT+++E + Sbjct: 478 CGYVIRCHDCDIALTYHTQGHTMRCHYCNHEEVPPRTCPECGSRYIRFFGQGTQRVEDEI 537 Query: 499 APLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 L+P I R+D DTT K A E L + R A IL+GTQM+AKG FP+VTLV ++ Sbjct: 538 KGLYPAARILRLDFDTTRSKDAYEDILGKFRRQEADILVGTQMMAKGLDFPNVTLVGVVA 597 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D L DFR+ ER QL TQVAGRAGR+ K G+VV+QT+ PE + + F Sbjct: 598 ADQMLNMPDFRARERTFQLLTQVAGRAGRSQKPGQVVIQTYTPEDRAIIQASQHNFKGFF 657 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEK----LWVLG 674 + + R+ PP+T + V + L N + ++D+ L +LG Sbjct: 658 WEEIGYRKARNYPPFTHVIRVTLIHEKEEKVIKGAHSLVNSLRQGIVSDQNGHTSLDILG 717 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 P PA+ P+ +RWQ+ ++ L+ ++ + P S ++ ++VDP+ Sbjct: 718 PAPAVIPRLKNHFRWQVSVKGKLMDTLREFLHQGVRRFARDPISSGIQLNIEVDPL 773 >UniRef50_C0N5C3 Primosomal protein N', putative n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N5C3_9GAMM Length = 727 Score = 772 bits (1995), Expect = 0.0, Method: Composition-based stats. Identities = 303/731 (41%), Positives = 441/731 (60%), Gaps = 11/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSD-ASELPLNEL 60 + +A+P PL + FDYL E +AG RVR+ F + IGIV+ D +++ +L Sbjct: 4 ILQIAVPCPLRQLFDYLSEEPENHWQAGMRVRINFANRS-CIGIVIKARDVTNDIDTRKL 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+ E LD + + + + +LW + YYHHP+G+ ALP LR+G + +WF Sbjct: 63 KAIDEKLDDQALIPEEILQTVLWVSRYYHHPLGECFQAALPKQLRKGETSDLQLENWWFK 122 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 T+Q K KQQ + L Q A L +L+ +L + Sbjct: 123 TDQQSNK-----KLGTKQQACIDFLNDYPDGISQAAMKAHLGTVLSSLKALEQKNLVKQE 177 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 P +S LN +Q T + A+ F +LL G+TGSGKTEVY + E Sbjct: 178 PFPKLPIAQVELSV-PFELNNKQKTVIEAVWQKKAQFQPFLLEGITGSGKTEVYTELTEK 236 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 ++A+GKQ L+++PEIGLT Q + RF++R N + VL+S ++D +R WL AK G A ++ Sbjct: 237 IIAEGKQVLILIPEIGLTGQFVDRFKKRLNTNIVVLNSAVSDGDRKQGWLLAKRGLAKVI 296 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+FTP + G+I+IDEEHD+SYKQQ+G +YHAR++A+ RA IP+++GSATP+ Sbjct: 297 IGTRSAVFTPLPDAGLIIIDEEHDASYKQQDGLKYHARNVALIRAQKRGIPVLMGSATPS 356 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE+L V+Q++Y+LL+L +RAG A ++D GL+ L+ M QHL A NQ Sbjct: 357 LESLYQVEQQRYQLLQLKQRAGGAALPKVQLIDSNAAHPDHGLSQLLLKNMHQHLNAGNQ 416 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILF+NRRG+AP L+CHDCGW A+C CD +HQ ++ L CHHC + + CP C Sbjct: 417 VILFINRRGYAPVLMCHDCGWQAKCQHCDARMVVHQQRNILFCHHCGFIQRLLEACPECE 476 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L G GTE++EQ L LFP + R+DRDTT R A +A++ +G ARIL+GTQ Sbjct: 477 SKQLKSYGAGTEKIEQVLQKLFPDTAVVRVDRDTTQRVNAFNDIVADIKQGQARILVGTQ 536 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGH F DVTLV +LD D L+SADFR+ E AQ+ TQV GRAGR K+GEV++Q+ Sbjct: 537 MLAKGHDFHDVTLVGVLDTDQGLYSADFRATENLAQMITQVTGRAGRGDKKGEVIIQSQQ 596 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HP ++L+ +GY A+ L ER M +PP ++ ++RAE A FLQ + +++ Sbjct: 597 PQHPFWESLIQQGYKKTAQDLLQERIDMAMPPVSNWAVIRAEAQERHQAMDFLQAVTSIL 656 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + +LGPVPA+ K+GGR+R Q+LL R L +++ + I + +RK Sbjct: 657 --HSTQQQHVLILGPVPAIMEKKGGRFRAQLLLTCQQRKPLHQLLDQHIQAIGSHKLARK 714 Query: 721 VKWVLDVDPIE 731 ++W +D+DP++ Sbjct: 715 LRWSIDIDPMD 725 >UniRef50_D1N7K8 Primosomal protein N' n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N7K8_9BACT Length = 743 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 253/744 (34%), Positives = 367/744 (49%), Gaps = 22/744 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M +A V + V L + FDYL+PE + +K G VRVPFG R G V+S++D+S+ Sbjct: 1 MAIAKVIIDVSLDKEFDYLIPETLLPQIKVGVMVRVPFGHS-TREGYVLSLADSSDYTGG 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + + ++ + L W ADYY + LP +R G+ Y Sbjct: 60 RLKPITGLCETRANIPEHLVTLGRWMADYYCCSQEQSIRTLLPAAVRSGKIKPRIRRLYR 119 Query: 119 FATEQGQAVDL------NSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 A + S +AL A + F+ + L L + Sbjct: 120 IADVAAAESFVACNGTKPSAALRVDLVKALLAHGAQPADSLKSLVPAFSQSGLNTLIRNK 179 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA---DTFSAWLLAGVTGSG 229 + + E + ++ + + L + +Q A+ I + LL GVT SG Sbjct: 180 IVETVEEIVRRDVFGDSHVLPSKPLPPSADQKKALELIGKMLLGETSSHVLLLHGVTNSG 239 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVYL + GK A+V+VPEI LTPQT+ RFR RF + VLHS L+D ER W Sbjct: 240 KTEVYLQAIAKAREMGKSAIVLVPEISLTPQTVRRFRARFGDQLSVLHSRLSDGERFDEW 299 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + NGE I +G RSALF PF+NLG+I++DEEH+SSYKQ E RY ARD+AV R E Sbjct: 300 NRINNGEVQIAVGARSALFAPFRNLGLIIVDEEHESSYKQSEAPRYSARDVAVMRGKLEG 359 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK-----GQKVQAGLA 404 +ILGSATP+ ET N K+ L R+ + N ++D + + Sbjct: 360 AVVILGSATPSAETSYNASTGKFLLARMAAQVDNKLAPRVTIVDQRLAGPPEPGKSNFFS 419 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 ALIT + ++ Q I+FLNRRG+A ++C +CG+ A CP C YT + + L CH Sbjct: 420 KALITAVFDRMRRGEQSIIFLNRRGYARVMICEECGFEARCPDCSVAYTYSRQRETLTCH 479 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 C P CP C S + G+GTE++E +F I+R+D DT E Sbjct: 480 LCGGVIPAYELCPQCLSPKIRYAGVGTEKIESLAGAVFKPARIARMDSDTMRGADDYEAV 539 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L RG ILIGTQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQVAGR Sbjct: 540 LERFRRGELDILIGTQMIAKGLHFPNVTLVGIVNADLGLSMPDFRAPERTFQLITQVAGR 599 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGR +GEV++QTH+PE+ +Q + +D F++ L R+++ PP+T +IV Sbjct: 600 AGRGDIRGEVIIQTHNPENETIQYAAQQDFDGFSKFDLEFRQLLAYPPYTHLIIVHFRGE 659 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + F + E + GP PA + G++R+ ++++ L+ Sbjct: 660 DESMVVEFANGFTAELQRY--GHEGIRFAGPSPAPIERIKGKFRYMLVIRGSRLKLLRQA 717 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 + + V+ +DVD Sbjct: 718 LRVLALHRQ---PPKGVEVYVDVD 738 >UniRef50_A4XL83 Replication restart DNA helicase PriA n=1 Tax=Caldicellulosiruptor saccharolyticus DSM 8903 RepID=A4XL83_CALS8 Length = 723 Score = 771 bits (1992), Expect = 0.0, Method: Composition-based stats. Identities = 241/744 (32%), Positives = 382/744 (51%), Gaps = 36/744 (4%) Query: 1 MPVAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFG-KQQERIGIVVSVSDASE 54 M + V + + RTFDYL+P + V+ G RV V FG + G++++V + + Sbjct: 1 MMIVEVCINYQDANVDRTFDYLVPGHLEELVEVGKRVYVNFGVSNRVVEGLIINVKEDTN 60 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA--AN 112 + +LK V+ V+D P+ + +L +YY +G L +P + Sbjct: 61 VEREKLKCVLAVIDKIPIVSDEQIKLAFSIKNYYATKLGQALGLIIPPFVSNNEIYIICA 120 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 ++ + + LKR + N+ + +L +G Sbjct: 121 QQTSDLTLEDELKEIYNRILKR---------------PVSANSKLAKENEDKIASLFLRG 165 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGK 230 L + + + + + +L +Q A+ I S D + LL GVTGSGK Sbjct: 166 LLRFELKLLKSLNEEKRETPTEPQYKLTKDQKKALELITSTFDKGIYKNILLFGVTGSGK 225 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ + V+++GK ++MVPEI LTPQ I + R + V V HS +N S+R AWL Sbjct: 226 TEVYIQAMRYVISKGKSVILMVPEISLTPQMIQNVKRRIESEVVVYHSKMNSSQRQRAWL 285 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 K K+GEA +VIG RSA+F P K LG+I++DEEH++SYK ++ R +A ++A RA I Sbjct: 286 KLKSGEAKVVIGPRSAIFAPAKELGLIIVDEEHETSYKSEKSPRVNAVEVAQMRAKINSI 345 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 PI+LGSATP +E KY + L R A V+D+K + + + L Sbjct: 346 PIVLGSATPTVEHYYYAIAGKYAICTLRERINKA-LPEVFVVDMKKEILDGNKSIFSRLL 404 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 ++ + ++LQ QV+LFLNRRG++P ++C +CG++ C C T H+ +LRCH+C+ Sbjct: 405 LSEIEKNLQRGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-DGYLRCHYCN 463 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++ CP CGS ++ G GT+++E + F + R+D+DTT+RK A+E+ L++ Sbjct: 464 YKQEYTSICPKCGSKYVRQYGSGTQRIEDEIKTYFKDARVLRMDKDTTTRKDAVEEILSK 523 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 A IL+GTQM+AKG HFPD+TLV +++ D L DFRS ER QL TQVAGRAGR Sbjct: 524 FKSKEADILVGTQMVAKGLHFPDLTLVGVINADTILNMPDFRSKERTFQLITQVAGRAGR 583 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 KQG VV+QT +P+ + Y++F E+ + R+ M PP++ V N Sbjct: 584 -EKQGRVVIQTFNPDDYSIVAASNHDYESFFEEEIKIRKTMGYPPYSYIVNFIVVSQNEG 642 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A ++ + L+ L + GP + K ++R+ IL++ ++ I N Sbjct: 643 FAKKGIENVYRLLEK-CTKIVNLKIYGPSESPIFKVENQYRYHILVKFEKASQMIDIANM 701 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 N + ++DV+PI Sbjct: 702 IKERYN----YNNAELIIDVNPIN 721 >UniRef50_C6N0E3 Primosomal protein N (Replication factor Y) n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N0E3_9GAMM Length = 726 Score = 771 bits (1991), Expect = 0.0, Method: Composition-based stats. Identities = 313/731 (42%), Positives = 436/731 (59%), Gaps = 12/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY G+ G RV VPF ++Q R+GI+++ ++ E+ + LK Sbjct: 4 VYQVCIPHTHRDFFDYEAEAGLNPCVGARVWVPF-RKQTRLGIILAKNEFQEV-TSSLKC 61 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + V+D EP+ + L W + YY P+ +VL ALP R G+ ++ Sbjct: 62 ISAVIDEEPLIQRDILALCAWISSYYQSPLSEVLPLALPKKYRLGQDCQLPMGDFYQLAL 121 Query: 123 QGQAVDLNSLKRSPKQQQ--ALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 R+ KQ + A + + + + F + LQ L + L+ ++ Sbjct: 122 PVTNAKQLVPVRARKQLELIDFLATQTEPVSKHCLTQRGFTSSQLQKLLAAQIIFLSQQS 181 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 T L LN EQA AV AI + +LL GVTGSGKTEVYL V+ N Sbjct: 182 MVPECADTP---MSPALSLNPEQAEAVTAISEQLQQYQCFLLQGVTGSGKTEVYLQVIAN 238 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VL QGKQ LV+VPEIGLTPQ +ARF RFN + V+HS LN+SER AW AK + +V Sbjct: 239 VLQQGKQVLVLVPEIGLTPQLLARFTARFNQAIAVIHSSLNESERQIAWQLAKENKVKMV 298 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTR+A+FTP +LG+IVIDEEHD+S KQ EG RY ARD A+ RAH IPIILGSATP+ Sbjct: 299 IGTRAAIFTPMPDLGLIVIDEEHDTSLKQMEGVRYSARDTALMRAHLANIPIILGSATPS 358 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +Q KY+LLRLT +A + P ++DL+ Q +Q GLA + +++HLQ NQ Sbjct: 359 LESVHNSKQGKYKLLRLTHKALSTTPLHYQLIDLRAQTLQHGLAIPTLHLIKEHLQKKNQ 418 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+A+C CD + TLH+ + CHHC + P C SC Sbjct: 419 VLVFINRRGFAPVLLCHQCGWMADCRACDSHLTLHKQAGQMICHHCGLTQRTPTYCRSCQ 478 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L+PVG GT+++ + L+ FP + RIDRD +K AL++ L +HRG A++++GTQ Sbjct: 479 SNELIPVGAGTQRVHEFLSSYFPETHVVRIDRDAVRKKNALDEHLEMIHRGEAQLIVGTQ 538 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV +LD D L++ DFR+ E+ QL TQVAGRAGRA G+V++QTH Sbjct: 539 MLAKGHHFPRLSLVVVLDADAGLYNQDFRALEQLGQLLTQVAGRAGRAEHAGQVLIQTHL 598 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ +GYD FAE L R+ QLPP+ ++RA+ FLQ + + Sbjct: 599 PDHPLLNVLIQQGYDDFAEALLTTRQQAQLPPFHYLAVIRAQGKIAGSVLKFLQAAKEHM 658 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 S P L V+GP PA P++ ++R Q+L++ SR L+ + + S Sbjct: 659 QSHP-----LTVMGPAPAPLPRKANQYRMQLLIKSSSRKVLKTSLTQLRTWLTINKLSNG 713 Query: 721 VKWVLDVDPIE 731 V+W +DVDP++ Sbjct: 714 VRWNVDVDPMD 724 >UniRef50_Q6FF05 Primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FF05_ACIAD Length = 743 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 312/733 (42%), Positives = 440/733 (60%), Gaps = 11/733 (1%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSV--SDASELPLNE 59 VA+PV L TFDY + + +AG RV V FG +Q IG++ D P + Sbjct: 15 VRVAVPVHLYDTFDYSVSQQQYEQAQAGARVLVSFG-RQSLIGVITEKLAPDLPIDPRFQ 73 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK + E++D P+ V LL W+A YY PIG+V+ ALP LLRQG+ + + W Sbjct: 74 LKTIRELIDQAPILDTKVLTLLTWSAHYYQFPIGEVIQTALPSLLRQGKS-QDVLTYIWK 132 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T +A + + L + A L+AL KK L E Sbjct: 133 ITAHPEAESKLKRSQKQYDAYQILKLHPTGTTETILNLSGVETATLRALAKKELVACTQE 192 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +F+ A L N +Q A+ + + + A+LL G+TGSGKTEVYL ++ Sbjct: 193 IQDFTPMPVQLAQM--PLTPNPDQHNAIQRVLKSLHHYQAFLLDGLTGSGKTEVYLQIMH 250 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 VL QGKQ LV+VPEIGLTPQTI+RF+ RF+ V +LHSGLNDS+RL AW +AK G+A+I Sbjct: 251 EVLKQGKQVLVLVPEIGLTPQTISRFKSRFHCDVALLHSGLNDSKRLQAWQQAKMGKASI 310 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 ++GTRSA++TP LG+I++DEEHD SYKQQEG+RYHARD+A+YR + EQ P+ILGSATP Sbjct: 311 ILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGYLEQCPVILGSATP 370 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 ++++ V+Q K LL+L +RAG A H++DLK K GL+ LI +++ L Sbjct: 371 SIDSYHLVEQNKLELLQLNQRAGVALLPKMHLIDLKVAKKNEGLSQILIDQIQHTLDRQE 430 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHHCDSQRPVPRQCPS 478 QV++FLNRRG+AP L+C CGW A CP CD ++TLH Q +L CHHC + +P CP Sbjct: 431 QVLIFLNRRGYAPVLVCESCGWQANCPNCDAHFTLHTQPYGYLHCHHCGTIHRLPETCPE 490 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C L +G+GT ++E+ L LFP + R+DRD+TSR G+ ++ + IL+G Sbjct: 491 CHHHTLKTLGMGTAKVEEHLKTLFPEHDVIRVDRDSTSRVGSWQKIYDRIQHNKPMILLG 550 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGHHFP VTLVA+LD+D L S D R+ ER AQL QVAGRAGR +G V +QT Sbjct: 551 TQMLAKGHHFPYVTLVAILDIDAGLLSVDVRAPERTAQLIVQVAGRAGRGEHKGHVYMQT 610 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+HP+L TL+ K Y A A+ L ER+ +LPP+ V++R E + ++ FLQ++ Sbjct: 611 LRPDHPMLTTLIEKDYRAVAKDMLEERKAARLPPYRYSVLIRCESRDRDYSQAFLQEIAQ 670 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 ++ A + + + GP+PA ++ GR+R +++ R RL + A + +P Sbjct: 671 MLQ--HQAGDSIEIWGPIPAPMERKAGRYRAHMVILAQDRARLHFFLRPWWAEVIQLPRQ 728 Query: 719 RKVKWVLDVDPIE 731 +++ +DVDP E Sbjct: 729 HQLRLSIDVDPQE 741 >UniRef50_A5II38 Primosomal protein N' (Replication factor Y) n=4 Tax=Legionella pneumophila RepID=A5II38_LEGPC Length = 725 Score = 769 bits (1986), Expect = 0.0, Method: Composition-based stats. Identities = 298/731 (40%), Positives = 426/731 (58%), Gaps = 13/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + V +P FDY +T G RV VPF + Q R+GIV++ + + LK Sbjct: 4 IYQVCIPHTNRDCFDYEA-LDLTPCIGGRVWVPF-RNQARVGIVINKVCGQQT-GHSLKK 60 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + ++D +P+ + L LW YY P+ +V+ +P R G P + ++ Sbjct: 61 ITSIIDEKPLVPEDLLELCLWVGSYYQSPLSEVIPLVIPKKYRLGLPCSLPTEDFYQLNI 120 Query: 123 QGQAVDLNSLKRSPKQQQ--ALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + K++ KQ + + Q I + + +N + AL +L+ + Sbjct: 121 PVEKAKTLISKKAKKQHELIDFLSRHQKGISKQTLKQHGYNGTQIAALLACQAINLSQQV 180 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + L LN EQA AV +I + +LL GVTGSGKTEVYL V+ Sbjct: 181 ILPTKIPEKL---SPPLALNPEQAVAVASIFEHIHHYQCFLLQGVTGSGKTEVYLHVIAK 237 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 +L QGKQ LV+VPEIGLTPQ ++RF RFN P+ VLHS LN+SER AW AK + +V Sbjct: 238 ILEQGKQVLVLVPEIGLTPQLLSRFTARFNHPITVLHSNLNESERQIAWQLAKENKVKMV 297 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+FTP NLG+I+IDEEHDSS KQ EG RY ARD A+ RAH IPIILG+ATP+ Sbjct: 298 IGTRSAVFTPLPNLGLIIIDEEHDSSLKQMEGVRYSARDTALMRAHLANIPIILGTATPS 357 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LET+ N +QKKY LLRLT +A + P ++DL+ Q VQ GLA + + HL NQ Sbjct: 358 LETIHNCKQKKYNLLRLTHKAASTTPLHYQLIDLRSQMVQHGLALPTLKIIENHLLQQNQ 417 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + +P C +C Sbjct: 418 VLVFINRRGFAPVLLCHQCGWMVDCKACDSHLTLHKQAGQMICHHCGLTQRIPLFCNNCQ 477 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S L+PVG GT+++ + L+ FP + RIDRD +K +L L ++++G A+++IGTQ Sbjct: 478 SKELIPVGSGTQRIYEFLSHQFPDTNVLRIDRDEVRKKNSLNSHLDKINKGEAQLIIGTQ 537 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV ++D D ++ DFR+ E QL TQV+GRAGRA G+V++QT+ Sbjct: 538 MLAKGHHFPRLSLVVVVDADAGFYNQDFRAIEHLGQLLTQVSGRAGRAEHAGQVLIQTYL 597 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ GYD FA L R+ ++PP+ ++RA+ FL+ ++ I Sbjct: 598 PDHPLLNLLIQHGYDEFANALLISRQEAEMPPFQFLAVIRAQGKTVNKVAQFLKATKDQI 657 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + P L VLGP PA P++ + R Q+L++ PSR L+ + + S Sbjct: 658 QAHP-----LKVLGPAPAPLPRKANQHRMQLLIKSPSRKVLKSSLTQLREWLTMNKLSNG 712 Query: 721 VKWVLDVDPIE 731 ++W +DVDP++ Sbjct: 713 IRWNVDVDPMD 723 >UniRef50_B1YIQ3 Primosomal protein N' n=2 Tax=Exiguobacterium RepID=B1YIQ3_EXIS2 Length = 774 Score = 769 bits (1985), Expect = 0.0, Method: Composition-based stats. Identities = 255/781 (32%), Positives = 400/781 (51%), Gaps = 66/781 (8%) Query: 3 VAHVALPVP---LPRTFDYLLPE---GMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 +A V + V + R FDY +P+ + V G RV VPFG + +GIVV+V D ++L Sbjct: 2 IAEVIVDVAAATVDRPFDYEVPDLWRDLVV-PGMRVEVPFGPR-ALLGIVVAVKDETDLA 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHH----------------PIGDVLFHAL 100 +K +V VLD P +T + +L + ++ ++ Sbjct: 60 --RIKPIVRVLDETPTYTEELLQLSSYLSETTLCYQATALLAMLPAALKVSYDKLILAEN 117 Query: 101 PI-----------------------------LLRQGRPAANAPMWYWFATEQGQAVDLNS 131 P L+ ++L+ Sbjct: 118 PRLIHWNQKKISQFPSEVQQQILVAAQNGDIRLQPIVKEKKTSKTDKRIRLLDSTIELSK 177 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 + R +W + + L+ + L +L KKG+ + + + + Sbjct: 178 QATKQILLREYLMARPEVLWSEVMHELDLTVSILNSLEKKGVITVETIDVNRNPYEHLVQ 237 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 L T Q AV AI ++ +T S +LL GVTGSGKTEVYL + +L +G+QA+++ Sbjct: 238 DIFVPSTLTTHQQDAVDAITASEET-STFLLHGVTGSGKTEVYLESIHTMLQRGRQAILL 296 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEI LTP + RF+ RF V VLHSGL+ E+ W K +GE +V+G RSA+F P Sbjct: 297 VPEISLTPMMVKRFKRRFGDRVAVLHSGLSLGEKYDEWRKISHGEVDVVVGARSAIFAPL 356 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 N+GVI++DEEH+++YKQ+E RYH RD+A +RA + P++LGSATP LET Q+ Sbjct: 357 TNIGVIILDEEHETTYKQEENPRYHTRDVATWRAAYHKCPVVLGSATPILETYARSQKGV 416 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRR 428 YR L L R G P ++D++ + ++ + L+ ++Q ++ Q +L LNRR Sbjct: 417 YRYLPLKERFGGELPP-VEIIDMRKELERSNRTPFSLPLVEGIKQRIERGEQTVLLLNRR 475 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+ +LC DCG +CP C T HQ Q L+CH+C + +P+ CPSC S + G Sbjct: 476 GYTTFVLCRDCGETLQCPHCAVNLTYHQHQDCLKCHYCGFEAAMPKTCPSCESKKIRQFG 535 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GT+++E+ LA L P I R+D+DTTSRKGA E+ L RG IL+GTQM+AKG F Sbjct: 536 TGTQKIEEELAHLIPEAKIIRMDQDTTSRKGAHEKLLNAFERGEGNILLGTQMIAKGLDF 595 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 P+VTLV ++ D L DFR++ER QL TQV+GRAGR G+ ++QT++P+H ++QT Sbjct: 596 PNVTLVGVIAADATLGIPDFRASERTFQLITQVSGRAGRGALAGQSIIQTYNPDHYVIQT 655 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 Y+AF ++ + R++ PP+ +V + A + + + L + Sbjct: 656 AKRHDYEAFYQREMQLRKLGGHPPFWFLGLVTISAAHPLEAQAEAEAIAGELR--HLESD 713 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 L V GP+ A + +R+Q++L+H + ++ + LA + +KV+ +D++ Sbjct: 714 DLIVNGPLEAPLARLKNMYRYQVILKHKGQEEVREALRAMLA----LRIKQKVQVTVDLN 769 Query: 729 P 729 P Sbjct: 770 P 770 >UniRef50_C8PYU8 Primosomal protein N' n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PYU8_9GAMM Length = 746 Score = 768 bits (1984), Expect = 0.0, Method: Composition-based stats. Identities = 320/746 (42%), Positives = 444/746 (59%), Gaps = 22/746 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VALPVP+ FDY + GCRVRVPFG ++ +GIVV+ + S+L N +K Sbjct: 2 LIQVALPVPIDSVFDYRVVGDALPAIGCRVRVPFGARK-LVGIVVAHIEHSQLTQNAIKP 60 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V+++LD P+ ++ +L W + YY +P+GDV LP L+RQG + + + Sbjct: 61 VLDILDERPIVDEALLKLAYWLSAYYCYPLGDVFAVMLPTLIRQGMTLDYRQLCWQQLRD 120 Query: 123 QGQAVDLNSLKRSPKQ--------------QQALAALRQGKIWRDQVATLEFNDAALQAL 168 S K+ +Q + + + A L+ Sbjct: 121 ATDEDFSASAKKQRQQFALCELVINSHGNSHRNSHGNDTKLVTEFALIDHGVEPAYLKKF 180 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVT 226 +KGL + P ++ L LN +Q AV I A +LL G+T Sbjct: 181 EQKGLIAPVYQMPSLPKLAK---LATTPLTLNLQQQQAVQKITRACQQPHYEGFLLNGIT 237 Query: 227 GSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERL 286 GSGKTEVYL V++ VLAQGKQ L++VPEIGLTPQT RF ERF+A V +LHSGLND+ RL Sbjct: 238 GSGKTEVYLQVMQTVLAQGKQVLILVPEIGLTPQTRQRFAERFDAQVLMLHSGLNDTVRL 297 Query: 287 SAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAH 346 W + + G A I+IGTRS++ PF NLG+I++DE HD SYKQQ+ RYHA D+A+YR Sbjct: 298 DGWQQCRLGYAQIIIGTRSSVLYPFANLGLIIVDESHDQSYKQQDSLRYHASDVALYRGF 357 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPA 406 P+ILG+ATP+LE+L VQQ K L LT+RAG+A+PAI ++D + Q Q GLA + Sbjct: 358 QLNCPVILGTATPSLESLYLVQQGKLTELTLTQRAGDAKPAIMQLIDARQQAWQNGLAQS 417 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH-QAQHHLRCHH 465 LI +RQ L D QV++FLNRRG+AP LLC CGW A+CPRCD + T+H Q L+CHH Sbjct: 418 LIQAIRQTLDKDEQVLVFLNRRGYAPILLCDACGWQADCPRCDAHLTVHFQPVAMLKCHH 477 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 CD Q+ +P CPSCGS++L PVG+GT ++ + L LFP VP+ +IDRDTT +K + EQ Sbjct: 478 CDWQQAIPNHCPSCGSSNLDPVGMGTARMVEGLIELFPDVPVIQIDRDTTRKKNSWEQVY 537 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + IL+GTQM+AKGHHFP+VTLVA+ + D S+DFRS E AQL QVAGRA Sbjct: 538 QRIADNPKAILVGTQMVAKGHHFPNVTLVAIPNADRGFLSSDFRSPEHTAQLIIQVAGRA 597 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GRA K G V++QT PE+P L TL+ +GY +FA+Q LAERRM+ LPP T +VR E + Sbjct: 598 GRADKAGLVLIQTLQPENPALLTLVREGYLSFAQQLLAERRMLGLPPLTYACLVRVESKS 657 Query: 646 NQHAPLFLQQLRNLILSS-PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 ++ L Q L+ S + + + GPV A K+ R+ +L+ +R Q + Sbjct: 658 LENNQQILHQAIALLPSRQHMTALGIAINGPVDAPMAKKNSRYHSHLLILTKTRHVRQQL 717 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 ++ +P ++ + +D+DP+ Sbjct: 718 LSDWWRQTIALPSAKYARLSIDIDPM 743 >UniRef50_D1RCN0 Primosomal protein N' n=1 Tax=Legionella longbeachae D-4968 RepID=D1RCN0_LEGLO Length = 753 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 298/731 (40%), Positives = 436/731 (59%), Gaps = 13/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V +P FDY + + G RV VPF ++Q R+G+V+S+ +A + LK Sbjct: 32 VYQVCIPNTNRDCFDY-IADEFAPCIGARVWVPF-RKQTRLGVVISLKEAVQ-DSVLLKT 88 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + V+D EP+ + L LW A YY P+ +VL ALP R G ++ Sbjct: 89 ISAVIDKEPLLDEKILTLCLWIASYYQSPLSEVLPLALPKKYRLGEVCQLPMSDFYQLAL 148 Query: 123 QGQAVDLNSLKRSPKQQQ--ALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 N R+ KQ + ++++ + + + FN + L L + L+ + Sbjct: 149 PLDEAKKNIPARAHKQLKLIEFLSIQKEPVAQRDLIQKGFNHSQLGHLVATQVLSLSQKI 208 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 ++ L LN+EQA AV I F +LL GVTGSGKTEVYL V+ Sbjct: 209 IFPQRAEISHI---PSLTLNSEQAVAVATIKEKLSHFQCFLLQGVTGSGKTEVYLQVIAE 265 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 VL QGKQ LV+VPEIGLTPQ +ARF RF P+ V+HSGLN+SER AW AK + +V Sbjct: 266 VLEQGKQVLVLVPEIGLTPQLVARFTARFKQPIAVIHSGLNESERQVAWQLAKENKVKVV 325 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTR+++FTP LG+IV+DEEHD S KQ EG RY ARD A+ RA+ IPIILGSATP+ Sbjct: 326 IGTRASIFTPMPALGLIVVDEEHDPSLKQMEGVRYSARDTALMRANLANIPIILGSATPS 385 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +Q+KY+LLRLT +A + P ++DL+ Q VQ GLA + +++HL+ NQ Sbjct: 386 LESIYNCKQQKYKLLRLTHKALSTTPLHYQLIDLRSQVVQHGLATPTLHVIQEHLKKKNQ 445 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V++F+NRRGFAP LLCH CGW+ +C CD + TLH+ + CHHC + P C +C Sbjct: 446 VLVFINRRGFAPVLLCHQCGWMVDCRACDSHLTLHKQIGQMICHHCGLTQKKPEYCSNCQ 505 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 T L+PVG GT+++ + L FP + + RIDRD +K ++++ L ++H G A++++GTQ Sbjct: 506 GTELMPVGAGTQRIHEFLGLHFPHIEVMRIDRDAVRKKNSMDEHLDKIHSGEAQLIVGTQ 565 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 MLAKGHHFP ++LV +LD D L++ DFR+ E QL TQV+GRAGRA G V++QTH Sbjct: 566 MLAKGHHFPRLSLVVVLDADAGLYNQDFRALEHLGQLLTQVSGRAGRADSAGHVLIQTHM 625 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 P+HPLL L+ +GYD+FA+ L R+ ++PP+ ++RA+ + FL ++ I Sbjct: 626 PDHPLLNLLIQQGYDSFADFLLTMRQQAEMPPFYFLAVIRAQGKAATNVAKFLHAVKEQI 685 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + V+GP PA P++ ++R Q+L++ SR L++ + + S Sbjct: 686 KTH-----SIIVMGPAPAPMPRKANQYRMQLLIKSASRKALKYALTQLREWLTKNKLSNG 740 Query: 721 VKWVLDVDPIE 731 ++W +DVDP++ Sbjct: 741 IRWNVDVDPVD 751 >UniRef50_Q6SHU2 Primosomal protein N' n=1 Tax=uncultured marine bacterium 311 RepID=Q6SHU2_9BACT Length = 736 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 304/736 (41%), Positives = 440/736 (59%), Gaps = 9/736 (1%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP + V +PVPL F Y +P+G K G R++VPFG + IGI + SD+S+ Sbjct: 1 MPGDLIDVLVPVPLLEKFTYKVPKGYQKRKFKRGVRLKVPFGNR-ILIGIFWNYSDSSKP 59 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 K + E+LD + + ++ L W++ YYH+P+G+V+ + P LR+G+ A Sbjct: 60 KRASYKLIKEILDEDTLLDKALLDLADWSSRYYHYPLGEVITYFFPPSLRKGKEARFKES 119 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALR-QGKIWRDQVATLEFNDAALQALRKKGLC 174 YW T++G DL LKR+P Q++ L LR G + + + + L L KK L Sbjct: 120 TYWKVTDKGDFFDLAELKRAPSQREGLELLRENGDLSQKSLRAYGISSVTLNNLYKKELI 179 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 S + A+ ++ L EQ +V AI +LL GVTGSGKTEVY Sbjct: 180 QKISLEQLPVNSHQTEAIDEKK--LTPEQNISVQAISGEFGNDKTFLLNGVTGSGKTEVY 237 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + ++ QGKQALV++PEIGL PQ RF+E F V HS N+ ERL WL A+ Sbjct: 238 LRCIRKLVDQGKQALVLIPEIGLAPQAERRFKELFGDRVASFHSAKNERERLDVWLGAQR 297 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G IVIGTRS++F P KNLG+IV+DEEHD+S+KQ E +RY ARD+A+YRA +IP +L Sbjct: 298 GLYDIVIGTRSSVFIPMKNLGMIVVDEEHDASFKQTERFRYSARDIALYRAKLSKIPTLL 357 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 SATP++E++ N KY+LL L +RA A LDLKG+ ++ G + L+ + Sbjct: 358 ASATPSVESMSNALNGKYQLLTLKQRATGADLPSFVPLDLKGKTLKEGFSEKLLEEIESE 417 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L +NQV++FLNRRGFA +++C CGWI+ C RCD + T+H HL+CHHC++++P+ Sbjct: 418 LNKNNQVLIFLNRRGFACSMICKSCGWISHCDRCDAHMTVHSNPSHLQCHHCENKKPLFT 477 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CPSC G+GTE++E L F P+ RID D+T +K + + L + G Sbjct: 478 ICPSCQHNEFESYGIGTERIEGYLKKKFRQFPVLRIDSDSTRQKDSFKNYLKIIDEGKPL 537 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHHFP+VTLV +LD D +FSADFR +ER AQL TQV+GRAGR K G+V Sbjct: 538 ILVGTQMLAKGHHFPEVTLVGILDADSGIFSADFRGSERVAQLITQVSGRAGREKKPGKV 597 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 +LQT+ EHP ++ LL Y+ F ++ + +R + PP++ V ++AE N + FL Sbjct: 598 ILQTYCQEHPQIEELLKGDYETFIKKIIEDRASTKSPPFSFQVKLQAESFNGLLSRDFLS 657 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + S L ++ + +GP+P+L K+ G +RW++ L SR L + + + + Sbjct: 658 SCLDYLNKSQLMNKDIKTIGPLPSLMEKKSGVYRWEVSLFSSSRKSLHSLTDHLQSYLYL 717 Query: 715 IPDSRKVKWVLDVDPI 730 +RKV+W +DVDPI Sbjct: 718 PKQTRKVRWSIDVDPI 733 >UniRef50_Q1N0U9 Primosome assembly protein PriA n=1 Tax=Bermanella marisrubri RepID=Q1N0U9_9GAMM Length = 733 Score = 763 bits (1971), Expect = 0.0, Method: Composition-based stats. Identities = 322/737 (43%), Positives = 450/737 (61%), Gaps = 19/737 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 +AL PL +TFDY + G RV VPFG++ E +G+++ + + ++ ++ Sbjct: 6 YLRIALDKPLNQTFDYEPLANSRMHDYQIGMRVNVPFGQRSE-VGLILDIHNQPDIAPHK 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + E +D PV + + +L LW +YYH P+G+ LF LP+LLR+G+ A ++ Sbjct: 65 IKPIKERIDDSPVLSSELMKLGLWLHEYYHQPVGECLFTLLPVLLRKGQTAKATQEKHYC 124 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + +D ++R+P+Q+ L + K+ Q F + + L K L Sbjct: 125 L----EHLDWQKVERAPRQKAFLEWLQKQNHKVSHKQALDAGFTPSIIGQLIDK---QLV 177 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 SE + + + L LN EQ A+ I + F+ LL GVTGSGKTEVYL Sbjct: 178 SELWQDNFNALCGDSVEQALALNKEQEQALKGISE-KNGFNPVLLEGVTGSGKTEVYLQA 236 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA---KN 294 + + + Q KQ LV++PEIGLTPQT+ RF++RFNA + +LHSGLND +RL+AWL+A KN Sbjct: 237 ISSAVTQRKQVLVLIPEIGLTPQTVQRFQQRFNADILLLHSGLNDQQRLNAWLQASRHKN 296 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 +A I+IGTRSA+FT NL I++DEEHD+SYKQQEG RYH RD+AV RA IPIIL Sbjct: 297 EKAQIIIGTRSAVFTEMPNLDFIIVDEEHDASYKQQEGIRYHGRDIAVIRAAKRNIPIIL 356 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+L++L N KKY+ +RLT+RAG+A PA + D++ Q V+ G+A L+ + + Sbjct: 357 GSATPSLDSLHNALVKKYQHIRLTQRAGDASPANLEIYDIRKQSVEHGIADELLQHIEET 416 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ +Q ++F+NRRGFAP L C DCGWI+EC RCD TLHQ HL CHHCD ++ +P Sbjct: 417 LEQGDQALVFINRRGFAPTLYCPDCGWISECKRCDARMTLHQKPAHLHCHHCDHKQTLPH 476 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QCP+C ST + +G GTE+LE L F + RIDRD+T K A+EQ L VH G Sbjct: 477 QCPNCLSTRIQAMGAGTERLETHLEYRFRRHKVIRIDRDSTQGKDAMEQLLQPVHNGEPC 536 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHHFP V LV +L+VD FSADFR+ E+ AQL QVAGRAGR G Sbjct: 537 ILVGTQMLAKGHHFPKVNLVIMLNVDSGFFSADFRAMEKTAQLILQVAGRAGRESHGGRA 596 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT +HPLL L + Y A A L ER++ LPP+ +VRA+ N + A +L Sbjct: 597 IIQTEFADHPLLHLLSEENYHALALALLEERKLHSLPPYAHQALVRADSPNPKEAEQYLH 656 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 +L I PL + + +GP+P+ R GR+R Q+ ++ R RLQ+ + L+ Sbjct: 657 RLLQNIK--PLTENGISFIGPLPSPMELRAGRFRSQLWIRSHQRSRLQNFLKNIEPLLYQ 714 Query: 715 IPDSRKVKWVLDVDPIE 731 KV+W LDVDP + Sbjct: 715 QKGFNKVRWSLDVDPSD 731 >UniRef50_Q21H75 Transcription elongation factor GreA / replication restart DNA helicase PriA n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21H75_SACD2 Length = 736 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 316/736 (42%), Positives = 441/736 (59%), Gaps = 15/736 (2%) Query: 3 VAHVALPVPLPRTFDYLL-----PEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +ALPVPL RTFDYL P G+ GCRV+ PFG Q IGI++ V SE P Sbjct: 5 YLEIALPVPLRRTFDYLTNFQGDPNGL---IGCRVQAPFG-NQTLIGIIIGVKAQSETPA 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-RPAANAPMW 116 +++K + ++D P+ +H +L WAA+YYHH +G+VL ++P LRQG R + Sbjct: 61 DKMKDIHTIIDDTPLISHLDLQLFSWAANYYHHSLGEVLHASIPQKLRQGERQEHEQLIS 120 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDAALQALRKKGLCD 175 W T +G + +L RS KQQ+ L + + R L F+ +A++AL+ K L + Sbjct: 121 AWKHTPEGMGLPETALNRSKKQQEIHRYLLQNTQFTRSTAQRLGFSTSAIKALKDKNLIE 180 Query: 176 LASETPEFSDWRTNYAVSGE-RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 +TN ++ L LN EQ A ++ F A+LL GVTGSGKTEVY Sbjct: 181 EILVKDSIEQVQTNNSLLNNTPLTLNQEQTAAQESVI--FHRFGAYLLDGVTGSGKTEVY 238 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++ L G QALV++PEIGL+PQT+ RF++RF+ + LHS +N+++R W AK+ Sbjct: 239 LQLVARALQAGTQALVLIPEIGLSPQTVGRFKDRFSVEIAELHSSINEAKRAEHWQAAKS 298 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 G A IVIGTR A G+I++DEEHD SYKQ +G+RY ARD+ VYRA IP++L Sbjct: 299 GRAKIVIGTRLAALAALNKPGIIIVDEEHDLSYKQHDGFRYSARDICVYRAKQHNIPVVL 358 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LETL N +Y+ L+LT+RA A P +D++ Q++ AGL + I +R Sbjct: 359 GSATPSLETLNNAITGRYQHLKLTQRASTATPPHIESIDIRNQQLTAGLCESAIEEIRHT 418 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 LQ Q ++FLNRRGFAP+L CH CGW A+C C+ T H HL CH CD Q VPR Sbjct: 419 LQRQQQALVFLNRRGFAPSLFCHHCGWQAKCTGCELPMTFHSHPRHLHCHRCDRQNGVPR 478 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CPSC + G GTEQ+E LA FP P+ RIDRDTTS K A+++ L + G Sbjct: 479 ACPSCKNQAFSHRGSGTEQIELFLAKQFPNTPVIRIDRDTTSSKKAMQKLLEPAYAGTPC 538 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGHH P + L + D D L SAD+R E+ QL TQVAGRAGRA G+V Sbjct: 539 ILVGTQMLAKGHHIPGINLAVIADADQGLMSADYRGVEQVGQLVTQVAGRAGRASSTGKV 598 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QTH P+HPL++ L+ +GY++FA Q LAER+ LPP+ ++R+E ++A LQ Sbjct: 599 LIQTHQPDHPLMRVLIAEGYNSFAVQLLAERKHSGLPPYGYSALIRSESKRPENALAILQ 658 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + I ++ + +GP+ A K G R+R+Q L SR L + L+ + Sbjct: 659 LIHGAIKNTG-NKHTITTIGPMAAPIEKIGNRFRFQYQLFCNSRKELHATLKAVLSEVEV 717 Query: 715 IPDSRKVKWVLDVDPI 730 ++R+ +W +D+DP+ Sbjct: 718 KAEARRTRWSVDIDPV 733 >UniRef50_Q2S9P6 Primosomal protein N' n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S9P6_HAHCH Length = 746 Score = 762 bits (1968), Expect = 0.0, Method: Composition-based stats. Identities = 309/743 (41%), Positives = 431/743 (58%), Gaps = 18/743 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK----AGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 V VALPVPL R FDYL ++ G RV+VPFG++ G+++++SD SELP++ Sbjct: 6 VVTVALPVPLRRQFDYLPSHPTDLRENYPPGSRVQVPFGRRS-LTGVILAISDESELPIS 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA----P 114 LK V +VLD P+ + +L W ADYYH PIG+V+F ALP LR + Sbjct: 65 RLKPVAKVLDRAPLIPSVILQLCQWVADYYHAPIGEVVFAALPPPLRTANADTDIISSLQ 124 Query: 115 MWYWFATEQG--QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 YW AT G + +K + ++Q L++ + + + L ++ L+AL KG Sbjct: 125 ETYWGATSLGLSAGNAEHLIKGAKQKQLWGLLLKRKSMLQGDITGLGYSLTQLRALSAKG 184 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 L S P E +LN EQ A+ I S D+F LL GVTGSGKTE Sbjct: 185 LIQPHSHIPGGGGAAPQII---EPPQLNQEQQEALNRISSEPDSFRTILLNGVTGSGKTE 241 Query: 233 VYLSVLENVLAQ--GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 VYL+ + L+Q Q L + PEI LTPQ RF RF V HS L D ER+ W+ Sbjct: 242 VYLAWIALALSQRPDSQFLALAPEISLTPQLRQRFALRFGDKVAAYHSALTDKERMRVWI 301 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 G IVIGTRSA+F PF +L I++DEEHDSS+KQQ+G RY+ARDLA+ RA Sbjct: 302 NILEGRTQIVIGTRSAVFLPFNDLAGIIVDEEHDSSFKQQDGARYNARDLAILRAKEHSC 361 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITR 410 PI+LGSATP+LE+L N + +Y + L +RA NA +LD+K + + G++P L+ Sbjct: 362 PIVLGSATPSLESLMNARGGRYESVLLRQRAVNADTPSIRLLDIKSRPLHGGISPPLLEE 421 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 ++QHL QV+LF+NRRGF+P L+C +CGW+AEC CD T H LRCHHCDS Sbjct: 422 IKQHLTEQRQVMLFINRRGFSPTLMCVECGWLAECQHCDARLTYHMKAALLRCHHCDSTY 481 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 +P CP C L VG GTE+ E+ L FP P+ RIDRDTT KG+L+ +L ++ Sbjct: 482 SLPTCCPKCKQDSLKAVGAGTERTEEFLETTFPDTPVIRIDRDTTQTKGSLQDKLLQIRS 541 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 I++GTQMLAKGH FP++ LV +++ D LFS+DFR+AE+ AQL QVAGRAGR+ Sbjct: 542 NEPCIIVGTQMLAKGHDFPNLALVGIINADSGLFSSDFRAAEKTAQLLLQVAGRAGRSAV 601 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 +G+V++QT P HPLLQ + + Y+A E+ L R +LPP+TS ++RAE + A Sbjct: 602 EGKVIIQTLFPSHPLLQAIAAQDYNAICEEELHIREAGRLPPFTSMALIRAEAPLLEAAL 661 Query: 651 LFLQQLRNLILSSPLADEK--LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 L L+ +L ++ + V GP P++ ++ R+ + L P + L+ + Sbjct: 662 GGLWSLKESLLELLKFNDGLQIEVHGPFPSVMQRKQNRFHAILWLFAPQKAELRQFLKHW 721 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 L I +W++DVDP+E Sbjct: 722 LRYSEGIATPSGFRWLIDVDPLE 744 >UniRef50_Q38XT7 Primosomal replication protein N (Factor Y) n=44 Tax=Bacilli RepID=Q38XT7_LACSS Length = 805 Score = 762 bits (1967), Expect = 0.0, Method: Composition-based stats. Identities = 256/807 (31%), Positives = 396/807 (49%), Gaps = 80/807 (9%) Query: 1 MP-VAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQ-QERIGIVVSVSDAS 53 MP +A V + VP R +DY +P + ++ G RV +PFG ++ G V+ V D Sbjct: 1 MPQIAKVIVDVPTMQTNRPYDYQVPVTLVDVIQPGMRVIIPFGNGDRKIQGFVLQVLDQL 60 Query: 54 ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 +LKA+ V+D P + L W A + L LP ++R Sbjct: 61 SF-TGQLKAIEAVVDLTPAVNPELLSLSDWLAQQTYAFQITCLQTMLPSVMRAKYTKTAT 119 Query: 114 PMWY---------------------------------------------------WFATE 122 T Sbjct: 120 LTDEIPTDLQASLFNGNDELTFDQNLAPDKLKQLMQLQRQGKISVTYHVDNRAQVKQLTA 179 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA----- 177 A+ L+ + + A + I Q + L+ + +K Sbjct: 180 IEPALSFEQLEEARMGLRKSAQKQSQLISYLQTLIDQEAPTLLKTILEKTTFTRENIRIG 239 Query: 178 -----SETPEFSDWRTNYAVSGER---LRLNTEQATAVGAI--HSAADTFSAWLLAGVTG 227 + +R YA + + + L +EQ TAV A+ ++ D +L+ GVTG Sbjct: 240 AEKGWLRQVKVEAYRNPYANAVQPTHKMTLTSEQETAVDAVVQSASTDASEVFLIEGVTG 299 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVYL ++ VL QGK AL++VPEI LTPQ + R + RF V VLHSGL++ E+ Sbjct: 300 SGKTEVYLQTIDAVLQQGKTALMLVPEIALTPQMVQRVKGRFGDLVAVLHSGLSEGEKYD 359 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + + EA +V+G RSA+F P +++GVI++DEEH++SYKQ E RYHARD+A++R+ Sbjct: 360 EWRRIERKEARVVVGARSAVFAPLEDIGVIIMDEEHEASYKQDESPRYHARDVAIWRSQY 419 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLA 404 P+ILGSATP+LE+ Q+ Y L+RLT+R ++D++ + + + Sbjct: 420 HNCPVILGSATPSLESRARAQKDVYHLIRLTQRVNQQALPAVELVDMREAMRVQKASNFS 479 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 PAL+ +++ +Q Q +L LNRRGF+ ++C DCG++ +CP CD TLH H ++CH Sbjct: 480 PALLAGIKERMQKGEQSVLLLNRRGFSSFIMCRDCGFVLQCPNCDISLTLHMDTHSMKCH 539 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +C + +P+ CPSC S + G GT+++E L L P I R+D DTT +KGA + Sbjct: 540 YCGHEEAIPKICPSCQSRQIRYFGTGTQKVEAELQELIPEARILRMDVDTTRKKGAHAKL 599 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L + A IL+GTQM+AKG FPDVTLV +++ D AL DFR++ER QL TQV+GR Sbjct: 600 LKKFGDHEADILLGTQMIAKGLDFPDVTLVGVINADTALGLPDFRASERTFQLLTQVSGR 659 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 AGRA K G+V++Q+++ E+ +Q Y+ F + +A R PP+ V V Sbjct: 660 AGRADKVGQVIVQSYNSENYAIQFAKQHDYEGFYQYEMAVRHRGGYPPYYFTVKVTVSHP 719 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 A Q+ + P+ ++ +LGP P + R+ +QI++++ +LQ Sbjct: 720 EEALAAKKSFQIAKQMR--PILSDQALILGPTPKSIARINNRYFYQIVIKYKQEPQLQAK 777 Query: 705 INGTLALINTIPDSRKVKWVLDVDPIE 731 + L K LD +P++ Sbjct: 778 LAEILETTQIDT-RHGFKIGLDNEPLQ 803 >UniRef50_A4BGC2 Primosome assembly protein PriA n=1 Tax=Reinekea blandensis MED297 RepID=A4BGC2_9GAMM Length = 730 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 316/727 (43%), Positives = 424/727 (58%), Gaps = 13/727 (1%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 VA+P P Y + V GCRV VP GK+ IG+VV +L + +L+AV Sbjct: 14 VAVPGPFSTPLTYACSK--PVAPGCRVEVPLGKRSV-IGVVVEQRPDEQLDMAKLRAVER 70 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 +LD PV + L W + YY H ALP LLR+G A + T G+ Sbjct: 71 ILDDTPVLPTDILALAEWMSRYYLHEFASPYLLALPGLLRKGEAATLPTETWLNLTVAGE 130 Query: 126 AVDLNSLKRSPK-QQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 A+D LKRS + Q + G++ + F QAL KK L L ET + Sbjct: 131 AIDPAQLKRSTQHQAIMTQLQQSGRLPWSHLRAQGFTRPQAQALEKKQLLSL-DETCDND 189 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 ++ L LN EQ+ A+ + A F+ +LL G+TGSGKTEVYL +E L++ Sbjct: 190 PIPPTGQLAEPSLTLNDEQSAALDQVSEA--RFAPFLLEGITGSGKTEVYLQAIERCLSR 247 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTR 304 G +ALV++PEIGLTPQT+ARF RF +LHSGL D +R AWL+A +G+AAIVIGTR Sbjct: 248 GHRALVLIPEIGLTPQTVARFERRFRDRCVILHSGLTDKQRTLAWLQANHGQAAIVIGTR 307 Query: 305 SALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETL 364 SA+ TP +LG+IVIDEEHD+S+KQQ+ RY ARD+A+ RA IPIILG+ATP+LETL Sbjct: 308 SAVLTPIPDLGLIVIDEEHDASFKQQDTLRYQARDVALKRAQLADIPIILGTATPSLETL 367 Query: 365 CNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILF 424 N ++ L+L RAG AR ++D++ Q+ Q GL+ L+ R+R+HL NQV+LF Sbjct: 368 HNALTGRFGHLQLKERAGGARLPTIELIDMRRQQQQHGLSERLLIRIREHLNDGNQVLLF 427 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRGFAP+ CH CGWIA+C CD + T H H CHHC + P P CP C S L Sbjct: 428 LNRRGFAPSWFCHSCGWIADCVFCDAHLTYHHHGHINICHHCGHREPPPTVCPDCHSRDL 487 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 +G GTE+ EQ L F VPI R DRD S + EQQL + G I++GTQMLAK Sbjct: 488 SAMGTGTERAEQLLESAFADVPIIRFDRDVASTRLKFEQQLEKTAEDGPAIIVGTQMLAK 547 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 GHHF VTLV + D DG LFSAD R+ ER QL TQVAGR+GR + GEV++QT++P++P Sbjct: 548 GHHFHRVTLVGVWDSDGGLFSADLRAKERMGQLLTQVAGRSGRGERTGEVLIQTYYPDNP 607 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 + Q L Y +FA L ERR +LPP+ +VRA+ + A L + + +L Sbjct: 608 IFQPLTEHDYRSFAFSLLEERRKTRLPPFGFVAVVRADSAFAERAEELLATMTSYLLEHH 667 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 + VLGP+PAL +R G+ R+ +++Q R L + +R+V W Sbjct: 668 A----VRVLGPLPALLSRRAGKHRFMLIIQADRRSALHEALVPLHRHY--PRQTRQVSWH 721 Query: 725 LDVDPIE 731 +D+DP + Sbjct: 722 IDIDPAD 728 >UniRef50_Q6MBV0 Putative primosomal protein N' n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBV0_PARUW Length = 745 Score = 761 bits (1965), Expect = 0.0, Method: Composition-based stats. Identities = 252/743 (33%), Positives = 389/743 (52%), Gaps = 25/743 (3%) Query: 3 VAHVALPVPLPRTFDY-LLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A V L + + +T DY ++P + + G RV VP + R G +V + S + Sbjct: 7 IASVILDISIDKTLDYGIVPSQLEAAQKGSRVEVPV-RGHSRTGYIVEIKSDSNFK--NI 63 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW-F 119 K + +L P+ +++L LW A YY P+ D+ LP +R+G Sbjct: 64 KPITRLLSETPLVPEELFKLALWVAKYYCAPLRDIFRIILPPSVRKGMKEKEQLFVVRGK 123 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAAL---RQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + E + V ++ ++ P Q L + + G + + + + +++ +L K+ L + Sbjct: 124 SKEILRQVCVDIREKKPAQASVLEVMLQVKNGILLSKLLEESKSSRSSVLSLAKQQLLIV 183 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVY 234 + + S + LN +QA A+ I ++ + F L+ G+TGSGKTE+Y Sbjct: 184 ETIKIDRSPLVDEDYFMTKPKILNEDQAVALNKIDASLNAKIFQTHLIHGITGSGKTEIY 243 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L +E L K +++VPEI LT QTI RFR RF + +LH L++ ER W K + Sbjct: 244 LQAIEKALKLEKGTIMLVPEISLTAQTIQRFRSRFAEKIAILHHRLSEGERRDEWHKIRE 303 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPII 353 G A I++G RSA+F+P NLG+I++DEEH+ SYKQ E Y ARD+AV R Q ++ Sbjct: 304 GRAKIIVGARSAIFSPVVNLGLIIVDEEHEQSYKQNEMSPCYQARDVAVMRGKLAQATVV 363 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA----GLAPALIT 409 LGSATP+LE+ N KY L L +RA A ++D++ + +A + L++ Sbjct: 364 LGSATPSLESYYNALNGKYALSVLHKRADVATLPDVTIVDMRKEFERAKTLTSFSEVLLS 423 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + + + QVILFLNRRG+ LLC DC I +C C+ T H +HL CH C Q Sbjct: 424 GIERRQKQGEQVILFLNRRGYHTTLLCQDCSHIVKCTHCEIPLTFHLGDNHLSCHLCGYQ 483 Query: 470 -RPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 P P++CPSC G+ HL G GTE +E+ L +FP + RID DTT KG+ ++ L + Sbjct: 484 ISPPPKECPSCRGTKHLKFRGAGTEHVEKALHAIFPQIRTMRIDADTTKHKGSHQKLLRD 543 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G A +LIGTQM+AKG HFP+VTLV +L+ D L DFR++E QL TQVAGR+GR Sbjct: 544 FGTGKADVLIGTQMIAKGLHFPEVTLVGVLNSDAGLNIPDFRASETIFQLITQVAGRSGR 603 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +GEV++QT PE+ +Q + Y F E+ +A R M PP++ + Sbjct: 604 GVTKGEVIIQTSMPENSTIQHAAKQDYAGFYEEEIAVREMFHYPPFSHLAKLTFSGKQPD 663 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 Q+ R L++ + PV P K +R+Q LL+ PS + L ++ Sbjct: 664 QTYEIAQKFRELLIFQLPQHYEFN---PVIPCGYAKIKDLYRYQFLLRGPSMIPLNLVLE 720 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 + +++K +D++P Sbjct: 721 NL---MQKFSIPKEIKLFVDINP 740 >UniRef50_B4D7U4 Primosomal protein N' n=2 Tax=Verrucomicrobia RepID=B4D7U4_9BACT Length = 741 Score = 760 bits (1962), Expect = 0.0, Method: Composition-based stats. Identities = 266/742 (35%), Positives = 390/742 (52%), Gaps = 23/742 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V + + FDY LPE + ++ G RVRVP + + + V+ + + +++P + Sbjct: 3 RYARVLVDDSAGKAFDYELPEAVAAVLQPGARVRVPV-RTRTALATVIELLEETDVPGVK 61 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L + EV+ +EP+ + + +L W +DYY + + LP ++R+ ++ Sbjct: 62 L--ISEVVSAEPILSPLLLKLGAWISDYYCCSLEAAMKAVLPNVIRKAEVGHQTRLFARL 119 Query: 120 ATEQGQAVDLNSLKRSPKQQ---QALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 A E + K++P Q L Q + + + A +QAL KKGL Sbjct: 120 AREVEEEELEKLRKKAPLQAGVIDHLTEAAQPVSVTELAEKCDASHAVVQALVKKGLIVT 179 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD-----TFSAWLLAGVTGSGKT 231 + E + V L +N EQ + A D LL GVTGSGKT Sbjct: 180 EAARVERDPFGDESFVHAAPLAMNPEQTAVFEHVRRAIDHPPDAAPKPLLLHGVTGSGKT 239 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP---VEVLHSGLNDSERLSA 288 E+YL ++ VL +G+ A+++VPEI LTPQT+ RF+ RF A V VLHS L++ ER Sbjct: 240 EIYLQAIQLVLERGQTAIMLVPEISLTPQTVERFKSRFAATRHEVAVLHSHLSEGERHDE 299 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W K ++G A IVIG RSA+F P NLG+IV+DEEH+++YKQ+E RYH RD+AV RA E Sbjct: 300 WHKIRDGRARIVIGARSAIFAPCANLGLIVVDEEHENTYKQEETPRYHGRDIAVLRASME 359 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPA 406 + I+LGSATP+LE+ N Q KY LLRL R + + ++DL+ + + G L+ Sbjct: 360 KCAILLGSATPSLESFHNAQTGKYELLRLIARVDDKKMPFIRIIDLRMESKKHGAILSER 419 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LIT + L Q ILFLNRRGF+ +L+C CG + ECP C T H+A + CH C Sbjct: 420 LITAINDRLTKKEQTILFLNRRGFSTSLICEKCGHVCECPNCSVALTFHRAAARMVCHIC 479 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 Q P++CP C + G GTE++E +++ LFP I R+D D R+ A + L Sbjct: 480 GYQAVAPQKCPECRDPGIKYTGTGTEKVEDSVSRLFPKAVIKRLDADVMQRREAFRETLT 539 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 G IL+GTQM+AKG HFP+VTLV +++ D L DFR+ ER QL TQVAGRAG Sbjct: 540 AFRTGKIDILVGTQMIAKGLHFPNVTLVGIINADLGLHLPDFRAGERTFQLLTQVAGRAG 599 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R +GEV +Q+ P P +Q + +D F EQ + RR PP+T V++ + Sbjct: 600 RGDVEGEVFVQSFTPFSPSIQHARHHDFDGFWEQEIEFRRQWDYPPFTHLVLIIVRSAHQ 659 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 Q + L + + + P PA K G +R+ ++++ S VRL + Sbjct: 660 QRGSFSAETLHRRLKEELPP--GVTLSEPAPAPLEKSHGSYRFHLMMRTRSIVRLSRHLR 717 Query: 707 GTLALINTIPDSRKVKWVLDVD 728 L + V +DVD Sbjct: 718 AVLDKL---TFPEDVFVTVDVD 736 >UniRef50_P94461 Primosomal protein N' n=104 Tax=Bacillales RepID=PRIA_BACSU Length = 805 Score = 759 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 224/636 (35%), Positives = 346/636 (54%), Gaps = 12/636 (1%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK-----IWRDQVATL 158 ++ + + E+ +++ KQQ L L + Sbjct: 168 AQKTNKKMVRHIQANASKEELAKQAEGLSRQAAKQQAILHFLISEPEGVKIPAAELCKKT 227 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-- 216 + + A ++ L +KGL + E ++ E L L EQ A I D+ Sbjct: 228 DTSSATIKTLIQKGLLKESYEEVYRDPYQDKMFKKTEPLPLTDEQRAAFEPIRETLDSDE 287 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 +LL GVTGSGKTE+YL +E VLA+GK+A+V+VPEI LTPQ + RF+ RF + V V+ Sbjct: 288 HKVFLLHGVTGSGKTEIYLQSIEKVLAKGKEAIVLVPEISLTPQMVNRFKGRFGSQVAVM 347 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HSGL+ E+ W K E +V+G RSA+F PF+NLG+I+IDEEH+SSYKQ+E RYH Sbjct: 348 HSGLSTGEKYDEWRKIHRKEVRLVVGARSAIFAPFENLGMIIIDEEHESSYKQEEMPRYH 407 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG 396 A+++A+ RA P++LGSATP LE+ Q+ Y LL L R + ++D++ Sbjct: 408 AKEVAIKRAEHHSCPVVLGSATPTLESYARAQKGVYELLSLKHRVNHRVMPEVSLVDMRE 467 Query: 397 QKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 + + L+ ++ + + Q +LFLN+RG++ ++C DCG++ +CP CD T Sbjct: 468 ELRNGNRSMFSVELMEKLEETIAKGEQAVLFLNKRGYSSFVMCRDCGYVPQCPHCDISMT 527 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 H+ L+CH+C + PVP CP C S H+ G GT+++E+ L + P + R+D D Sbjct: 528 YHRYGQRLKCHYCGHEEPVPHTCPECASEHIRFFGTGTQRVEEELTKVLPSARVIRMDVD 587 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 TTSRKGA E+ L+ G A IL+GTQM+AKG FP+VTLV +L D L DFRSAE+ Sbjct: 588 TTSRKGAHEKLLSAFGEGKADILLGTQMIAKGLDFPNVTLVGVLSADTTLHIPDFRSAEK 647 Query: 574 FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW 633 QL TQV+GRAGR K G V++QT+ P H +Q Y+ F + +A RR PP+ Sbjct: 648 TFQLLTQVSGRAGRHEKPGHVIIQTYTPSHYSIQLTKTHDYETFYQHEMAHRREQSYPPY 707 Query: 634 TSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 +V A + +++ + + ++ AD K +LGP + + R+R+Q ++ Sbjct: 708 YYLALVTVSHEEVAKAAVTAEKIAHFLKANCGADTK--ILGPSASPIARIKDRYRYQCVI 765 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 ++ +L ++ L + + V +D++P Sbjct: 766 KYKQETQLSALLKKILEHYKREIEQKHVMISIDMNP 801 >UniRef50_C4ZEW0 Primosomal protein N (Replication factor Y)-superfamily II helicase n=11 Tax=Clostridiales RepID=C4ZEW0_EUBR3 Length = 753 Score = 759 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 234/754 (31%), Positives = 374/754 (49%), Gaps = 27/754 (3%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A+V + + L +TF Y +P+ + ++ G V +PFG + G V+ V+D E Sbjct: 2 YANVIVDISHEKLDKTFQYSIPDELLCDIRPGVCVDIPFGSR-TITGYVIEVTDKPEYDP 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 K ++ + + L W Y + L +P+ + + + Sbjct: 61 ARTKPLIGIKADSVAVEAKLIALAAWIRRNYGSTMNQALKTVIPVKKQAKEQVSRSIALK 120 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA-----TLEFNDAALQALRKKG 172 + + L K+ + + AL L + A ++AL + G Sbjct: 121 IDKVKARAQLALCEAKKQKAKARLFRALIDADDGARLEYSFVTGKLSVSAATIRALEQSG 180 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGK 230 ++ +++ + + +V LN Q + V AI + +L+ GVTGSGK Sbjct: 181 FIEVITQSGYRNP-VEHMSVDTYDKVLNAAQQSVVDAIEGDIAAGLRNTYLIKGVTGSGK 239 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ ++ + + G+QA+V++PEI LT QT+ RF RF V +++S L++ ER + Sbjct: 240 TEVYMELIAHCIQSGRQAIVLIPEIALTYQTVMRFFARFGNRVSIINSRLSNGERYDQFE 299 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +AKNG+ I+IG RSALFTPF NLG+I+IDEEH++SYK + RYHAR++A+ A Sbjct: 300 RAKNGDIDIMIGPRSALFTPFSNLGLIIIDEEHENSYKSESVPRYHAREVAIEYARMSDA 359 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 ++LGSATP++++ + YRLL L +R + V+DL+ + + L+ L Sbjct: 360 IVVLGSATPSVDSYYKAKTGVYRLLELDKRVDDRPLPKCEVVDLRQELREGNRSILSTRL 419 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 M + L Q +LFLNRRG + + C CG++ +CP CD + H + CH+C Sbjct: 420 QELMEERLLNGQQTMLFLNRRGKSAFMSCRACGFVVKCPHCDVSLSEHSG-GVMVCHYCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 ++PVP+ CPSCGS ++ GT+++E +A FP I R+D DTT K A E+ L Sbjct: 479 YRQPVPKVCPSCGSKYISGFKAGTQKIEAMVAKRFPQARILRMDYDTTRAKDAYEKILQA 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 A ILIGTQM+ KGH F +VTLV +L D +L DF +AER L TQ AGRAGR Sbjct: 539 FSNHEADILIGTQMIVKGHDFSNVTLVGVLAADMSLHVNDFHAAERTFALLTQAAGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G VV+QT+ P+H ++T + Y+AF ++ + RR+M PP + ++V + Sbjct: 599 GKLPGNVVIQTYDPDHYAIRTAKEQDYEAFYDKEIEYRRLMNYPPVWNMLLVHVTSPDES 658 Query: 648 HAPLFLQQLRNLIL---------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 QQ+ ++ L SP + ++GP A K +R I ++ Sbjct: 659 ECSSMAQQVYDIALQMISHTDENQSPDDRHLIQLIGPADATIAKVNDIYRKVIYMKTSDY 718 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIEG 732 L I + + + D +P+ G Sbjct: 719 AALISIKDVIEQAVKADTAMKHANISFDFNPMSG 752 >UniRef50_D2R7W4 Primosomal protein N' n=3 Tax=Planctomycetaceae RepID=D2R7W4_9PLAN Length = 769 Score = 759 bits (1959), Expect = 0.0, Method: Composition-based stats. Identities = 260/747 (34%), Positives = 371/747 (49%), Gaps = 23/747 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VA V P FDYL+PE + +K G RV+VP G +E +G SV+ L Sbjct: 26 VAEVVFRDPPFGPFDYLIPEPLAPRLKPGARVQVPLGASREVVGYCTSVTSKP-ASGRPL 84 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KA+ V+D P+ + L W +DYY P G VL +P +R A Sbjct: 85 KAIAAVIDDVPLVERKMLELTRWMSDYYLCPWGQVLHGVVPAGVRGNAGTRETTFLSLSA 144 Query: 121 T---------EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 ++ L + + L + + + A + LRKK Sbjct: 145 EGRQILASGVDRSGEKPKKVLPAHLEILRILGTSPRELTPVELGEFASCSIAQITGLRKK 204 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVTGSG 229 S E L L+ Q+ A+ AI+ A D + LL GVTGSG Sbjct: 205 KWIASDVRRVRSSSHEELPLARTEPLALHPAQSHALAAINRAIDRRTSATILLHGVTGSG 264 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVY+ +E V++ G+QA+V+VPEI LTPQT RFR RF V VLHS L+D+ER W Sbjct: 265 KTEVYIQAIERVISFGQQAIVLVPEISLTPQTRQRFRSRF-DRVAVLHSHLSDAERHYHW 323 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + GE +++G RSA+F P +LG+IVIDEEHD S+KQ E RYHARD+A +RA Sbjct: 324 EQIARGEVQVIVGARSAVFAPAPHLGLIVIDEEHDGSFKQSEAPRYHARDVAEHRALQLG 383 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGLAP 405 IP++LG+ATP+LE+ + KY L+ + R +DL+ + + + Sbjct: 384 IPLVLGTATPSLESYYRARSGKYELVPMPDRVEGRELPHVGTIDLRVEFQSRSSRGSIGR 443 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L T + Q + QVIL LNRRG++ + C CG++A+C CD T H+ + L CHH Sbjct: 444 QLHTAIAQAIAEKGQVILLLNRRGYSTHVQCPACGFVAKCEHCDLALTHHREEQLLVCHH 503 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 CD P +CP C + GLGTE+LE + FP + R+D DT + G+ E L Sbjct: 504 CDFTTKPPERCPDCTFDGIRYSGLGTEKLEAEIKARFPAAKVLRMDSDTMQKPGSHEAAL 563 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 A+ G +IL+GTQM+AKG FP+VTLV +++ D AL DFR+AER QL TQVAGR Sbjct: 564 AKFRSGEVQILLGTQMIAKGLDFPNVTLVGVINADTALHLPDFRAAERTFQLVTQVAGRT 623 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR G V++QT P+HP ++ + Y F + L +R PP+T+ + + + Sbjct: 624 GRGELGGRVLVQTFSPDHPAIEAAVDHDYAKFVGRELPDRVAHGFPPFTTLLRLIVRGDS 683 Query: 646 NQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 F A + + +LGP P + G++R+ L L+ Sbjct: 684 ESKTREFATMAAESWKKLLEAKQCEHRILGPAPCAVARLRGKFRFHALATSVDSDTLRAT 743 Query: 705 INGTLALINTIPDSRKVKWVLDVDPIE 731 + T V+WV+DVD I+ Sbjct: 744 FREASS---TWKTPDDVQWVIDVDAID 767 >UniRef50_Q04FR0 Replication restart DNA helicase PriA n=2 Tax=Oenococcus oeni RepID=Q04FR0_OENOB Length = 803 Score = 758 bits (1957), Expect = 0.0, Method: Composition-based stats. Identities = 248/805 (30%), Positives = 406/805 (50%), Gaps = 80/805 (9%) Query: 1 MPVAHVALPVPLPR---TFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASEL 55 M A V + +P + F YL+P+ + G RVRVPFGK+ +G VV+V SE Sbjct: 1 MRTASVIVDLPTRQTNQPFTYLIPDDLLDFNLLGHRVRVPFGKRN-LMGYVVAVG-QSER 58 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRL----------------------------------- 80 +LK + ++D +PV + +L Sbjct: 59 SDFQLKKIESIIDEKPVLNSEMLKLSEWLSNYVFSYRVQVIQTILPNAFKPKYLKGLKIV 118 Query: 81 -----------------LLWAADYYHHPIGDVLFHALPIL-------LRQGRPAANAPMW 116 + + Y V+ + +++ + Sbjct: 119 DQVPEKIKENIFLNNQEIEFLPKNYTSEQIKVINSLIRQGKIVQTTTIQKKNKGKKVKVL 178 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR----DQVATLEFNDAALQALRKKG 172 + A +LN S Q++ L L + + L+ + + + KK Sbjct: 179 SNNLNDNDIATNLNKKSLSDSQKKLLIFLSGHRDGFFQVKELAEILDISKSTILTAEKKS 238 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGK 230 + + + + LN++Q ++ SA + +LL G+TGSGK Sbjct: 239 WLKKSEVRMTRNPVKKIAVTKTNAVELNSDQKKVFNSVESAITKNENKTFLLEGITGSGK 298 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVYL ++E +AQGK AL++VPEI LTPQ I + RF V +LHSGL+D ERL W Sbjct: 299 TEVYLQLIEKTIAQGKTALLLVPEIALTPQMIRLVKSRFLDSVALLHSGLSDGERLDQWE 358 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + ++G+ IVIGTRSA+F+P N+G+I++DEEH+++YKQ+ RYHARD+A++RA Q Sbjct: 359 EIRDGKIKIVIGTRSAVFSPLTNIGLIIMDEEHETNYKQEGNPRYHARDIALWRAKYHQA 418 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKG----QKVQAGLAP 405 +LGSATP+LE+ Q+ ++LL + RA A+ ++D++ + +P Sbjct: 419 VTLLGSATPSLESRARAQKGIFKLLTMNHRAVSGAKLPDVSIVDMREVWQKEHADNDFSP 478 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L+ ++ + + Q IL LNRRGF+ ++C +CG++ CP C+ TLH H L+CH+ Sbjct: 479 TLLKKIEERKENHEQTILLLNRRGFSSFVMCRNCGYVPRCPNCNLSLTLHMDSHSLKCHY 538 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + +P++CP CGS + VG GTE++E L L G+ ++R+D+DTT RKG+LE+ L Sbjct: 539 CGYEEAIPKKCPVCGSPQIRYVGTGTEKIETKLNSLVNGIRVARLDQDTTKRKGSLEKIL 598 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + +G +L+GTQM+AKG FPDVTLV +++ D L DFRS E+ QL TQVAGR+ Sbjct: 599 RDFGKGNYDVLLGTQMVAKGLDFPDVTLVGVINADIGLNLPDFRSGEKTFQLLTQVAGRS 658 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GRAGK GEV++QT +P++ ++ + Y+ F + ++ R + P+ + V + + Sbjct: 659 GRAGKTGEVIIQTFNPDNYAIKLAADQNYEGFYKTEMSIRHIADYSPYYYTIQVGIDGPD 718 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 A + ++ I P ++ VLGP P K R+ +QI+L++ ++ + Sbjct: 719 QFPASRAIDEVAEFIK--PKLAKETIVLGPTPKAIAKLRNRYYFQIILKYKKDPNIESTL 776 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 + + + + +D DP+ Sbjct: 777 SELQTVFGE-KLPKDIYLSIDRDPV 800 >UniRef50_B9MR35 Primosomal protein N' n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MR35_ANATD Length = 724 Score = 757 bits (1955), Expect = 0.0, Method: Composition-based stats. Identities = 228/740 (30%), Positives = 372/740 (50%), Gaps = 30/740 (4%) Query: 3 VAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFG-KQQERIGIVVSVSDASELP 56 +A V + + + FDYL+P + ++ G RV V FG + G+VV + +++ Sbjct: 2 IAQVCINYQDANVDKVFDYLVPTHLENSIEIGKRVYVSFGVSNRIVEGLVVGIKQTTDIE 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 N++K V+ V+D + + L +YY +G+ L +P + + Sbjct: 62 ENKIKCVLAVIDKFSIVSKEQIELAFSMKNYYALNLGEALSLVIPPFVSSKQIY------ 115 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + ++ ++ + + + E + ++ + L Sbjct: 116 -----NICAKKCEENKNLDDDLKELYESILKKPVSINSKLVKENKEKIVKLFLEGLLEFD 170 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVY 234 + N L EQ A+ I SA D + LL GVTGSGKTEVY Sbjct: 171 LKNFDTRENTEKNLPRVEPEFNLTEEQNKALNNIISAFDEGGYRNILLFGVTGSGKTEVY 230 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 + ++ V+ +GK + MVPEI LTPQ I + R V V HS + +RL++WL A+N Sbjct: 231 IRAIQYVIEKGKSVIFMVPEISLTPQMIENVQSRIGNKVLVYHSKMKSIDRLNSWLAARN 290 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 EA +VIG RSA+F P KNLG+I++DEEH+ SYK ++ R +A ++A RA IPIIL Sbjct: 291 KEAVVVIGPRSAVFAPVKNLGLIIVDEEHEPSYKSEKSPRINAVEVAQMRAKINNIPIIL 350 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 GSATP++E ++ KY L L R N ++D+K + ++ + L++ + Sbjct: 351 GSATPSIEHYYYAKKGKYSLCTLKNRI-NKTLPEVLIVDMKKEILEGNKSIFSRLLLSEI 409 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 +L+ QV+LFLNRRG++P ++C +CG++ C C T H+ + +L+CH+C + Sbjct: 410 ENNLKKGEQVLLFLNRRGYSPIVICRECGYVYMCKNCSISLTYHK-EGYLKCHYCGYKEE 468 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 C C S ++ G GT+++E+ + F + R+D DTTS+K A EQ + + Sbjct: 469 YKGVCTKCNSRYVRQYGSGTQKIEEEIKAYFKDARVLRMDSDTTSKKDATEQIVKKFREK 528 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 A IL+GTQM+AKG HFPD+TLV ++D D L DFRS ER QL TQVAGR+GR K Sbjct: 529 EADILVGTQMIAKGLHFPDLTLVGVIDADILLNMPDFRSRERTFQLLTQVAGRSGR-EKP 587 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G+V++QT +PE + Y++F Q + R+MM PP++ V A Sbjct: 588 GKVIIQTFNPEDYSIVFASKHDYESFYAQEMKLRKMMVYPPYSYVVNFVTVAREENMAKR 647 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 ++ + L+ + + + + + GP K ++R+ IL++ ++ I N Sbjct: 648 GIEHVYALLKENEMEN-DMKIYGPSENPIFKIENQYRYHILVKFKRAGQMISIANLIKER 706 Query: 712 INTIPDSRKVKWVLDVDPIE 731 N ++DV+P++ Sbjct: 707 YN----YSNASLIIDVNPLD 722 >UniRef50_Q1Q969 Replication restart DNA helicase PriA n=3 Tax=Psychrobacter RepID=Q1Q969_PSYCK Length = 793 Score = 756 bits (1953), Expect = 0.0, Method: Composition-based stats. Identities = 317/774 (40%), Positives = 441/774 (56%), Gaps = 54/774 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTV--------------KAGCRVRVPFGKQQERIGIVVS 48 + VALPVPL R FDY LP ++ + G RV V FG +Q IGIVV+ Sbjct: 26 LVQVALPVPLYRVFDYSLPSDISALPNASPNNSSIQLPQIGSRVEVSFG-RQTLIGIVVA 84 Query: 49 VSDASE--LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ 106 ++ +PLN+LK + + LD+E + +S+ +L W A YYH+P+G+VL LP L+RQ Sbjct: 85 HIAQADTSVPLNKLKPINKCLDAESILDNSLLKLAYWLARYYHYPLGEVLAVILPTLVRQ 144 Query: 107 GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQ 166 G+P + + K+ +Q L Q D + A L+ Sbjct: 145 GKPLDLLITHWRILPHITDDDFRTNAKKQKQQFDMLKLHGQHGASEDVLLLEGMERAFLK 204 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAG 224 L KG L + T+ ++ L LN EQ AV AI +A ++ ++ +LL G Sbjct: 205 TLEDKG---LIERYIQPKQAPTSVKLAKMPLDLNEEQQLAVAAIVAAHESKCYTGFLLNG 261 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 +TGSGKTEVYL ++ VL GKQ L++VPEIGLTPQT ARF RF A + +LHSG+N++ Sbjct: 262 ITGSGKTEVYLQAMQAVLEAGKQVLILVPEIGLTPQTRARFASRFAAHIVLLHSGMNNTH 321 Query: 285 RLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYR 344 RL W + G A I+IGTRSA+ PF +LG+IV+DE HD SYKQQ+ RYHA D+A+YR Sbjct: 322 RLQGWQDCRTGHAQIIIGTRSAVLYPFADLGLIVVDEAHDGSYKQQDTLRYHAADVALYR 381 Query: 345 AHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ------- 397 +IP++LG+ATP+LE L V + K +L+ R GNA+PA ++D + Q Sbjct: 382 GFQAKIPVVLGTATPSLEHLKLVDEGKLVECQLSTRPGNAKPAPMQLIDARLQSTHQQTQ 441 Query: 398 ----KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 + GL ALI +RQ L+A +QV++FLNRRG+AP LLC CGW A+CPRCD + T Sbjct: 442 DDGARYDTGLTDALIGAIRQTLEAGDQVLIFLNRRGYAPVLLCEACGWQADCPRCDAHLT 501 Query: 454 LH----------QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFP 503 +H + +L+CHHCD Q +P CP CGS +L G+GT +L + L +F Sbjct: 502 VHYNNQAQRSNYSSNSYLKCHHCDWQAYIPTVCPDCGSQNLDAKGMGTTRLSENLHAIFA 561 Query: 504 G-------VPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 PI +IDRDTT RK + E ++ G IL+GTQM+AKGHHFP+VTLV L Sbjct: 562 NPQTSKALYPIIQIDRDTTRRKDSWENIYQRINAGNPAILVGTQMVAKGHHFPNVTLVCL 621 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 + D SADFRS E AQL QVAGRAGR K G V++QT P++ LL L+ GY + Sbjct: 622 PNADRGFLSADFRSPEHTAQLMIQVAGRAGRGDKSGRVLIQTLQPDNALLLKLVKDGYLS 681 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 FA + L ER+MM LPP + ++R E L+ ++ L VLGP+ Sbjct: 682 FARELLQERKMMGLPPHSHAALIRCEGKTLAATTQALKDAIAVL----PTGHNLAVLGPI 737 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 A K+ R+ Q+LL R +L H++N + T+P ++ +K LD+DP+ Sbjct: 738 DAPMSKKNSRYHAQLLLLAKDRQQLHHVLNHWWQPVLTLPSAKYLKLTLDIDPV 791 >UniRef50_B1I505 Primosomal protein N' n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I505_DESAP Length = 735 Score = 756 bits (1952), Expect = 0.0, Method: Composition-based stats. Identities = 257/744 (34%), Positives = 366/744 (49%), Gaps = 26/744 (3%) Query: 1 MP---VAHVALPVPL---PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDA 52 MP A + + +PL + + Y +PE + G RV VPFG++Q G VV Sbjct: 1 MPERAYAEIVVDLPLSRVDQVYHYAVPERFRTELCLGSRVLVPFGRRQ-LAGYVVGFRSQ 59 Query: 53 SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 + + ++K +++VL S+P FTH ++ L W A+ Y L R A Sbjct: 60 A--AVEQVKDILDVLSSQPAFTHELYTLARWMAERYLCTTAQALQCI----AAPSRGAGP 113 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 +A G + D L +Q G A + L +KG Sbjct: 114 RYEEGVYAAPGGGSADQERLTPKQRQVWRTVREHPGLTRAQVAALSGVTPVVVARLLEKG 173 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGK 230 + + + + + + + E RL EQ A+ AI A +LL GVTGSGK Sbjct: 174 VLTTSRRSVARNPYPVSQTI-TELPRLTGEQLRALEAIEKGFQAQRKEFFLLHGVTGSGK 232 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TE+YL L QG+Q LV+VPEI L Q I +F+ RF V VLHS L ER W Sbjct: 233 TEIYLRAAAGALVQGRQVLVLVPEITLATQLIHQFKARFGDLVAVLHSRLGAGERYDEWN 292 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + GEA IV+G RSA+F P +N+G+ V+DEEH+ YKQ+E RY D+ RA + Sbjct: 293 RIFRGEAPIVVGARSAVFAPLQNIGLFVLDEEHEPGYKQEEAPRYLTGDVVRARAALSKA 352 Query: 351 PIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPA 406 ++ GSATPAL T + ++LL+LT R V+DL+ + + Sbjct: 353 VVVFGSATPALRTYARALTGQQHQLLKLTSRVDGRSLPQVRVVDLREELQAGNRHVFSRY 412 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L R+R+ L QV+LFLNRRG A +LC CG C C T H+ L CH+C Sbjct: 413 LAGRIREKLDQGQQVLLFLNRRGLATIVLCRACGEALSCAHCAISLTYHR-DGSLHCHYC 471 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 +R +P CP CG L G GT+++E+ LFPG + R+D DT + K + ++ L Sbjct: 472 GYRRNLPAACPVCGGERLSRFGTGTQRVEEETQRLFPGARVVRLDGDTVTGKRSHDRLLD 531 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 G A ILIGTQM+AKG P VTLV +++ D L D++SAER QL TQVAGRAG Sbjct: 532 SFREGQADILIGTQMIAKGLDLPGVTLVGVVNADTTLLLPDYQSAERTFQLVTQVAGRAG 591 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R GEVV+QT+HP+H +Q + Y+ F + +A RR M PP+T+ V Sbjct: 592 RGPVPGEVVVQTYHPDHYSIQAATSQNYELFFIREMALRREMGYPPFTTLARVLFRGRRE 651 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 QQ R L+ + D ++ V+GP P + +R ++L+ P R L+ ++ Sbjct: 652 SQVEQAAQQFRELL--ALPEDGRIQVMGPAPPPVARIKDYYRRHLILKAPKRKELRMLLV 709 Query: 707 GTLALINTIPDSRKVKWVLDVDPI 730 TL KV +D+DP Sbjct: 710 ETLDKFEAG-GRNKVLVGIDIDPQ 732 >UniRef50_A8ST73 Putative uncharacterized protein n=10 Tax=Bacteria RepID=A8ST73_9FIRM Length = 754 Score = 755 bits (1951), Expect = 0.0, Method: Composition-based stats. Identities = 234/748 (31%), Positives = 373/748 (49%), Gaps = 19/748 (2%) Query: 3 VAHVALPV---PLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQE-RIGIVVSVSDASELP 56 A V + + + R F Y++PE + + GC+V +PFG+ R G V+ +SD +E Sbjct: 5 YADVIIDISHEAIDRAFQYVIPEKLVSQIRTGCQVNIPFGRGNTMRTGYVIGISDRTEYD 64 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 ++K + V + L W + Y + + L +P+ Sbjct: 65 RTKIKTIDSVCTEGIAAPGRLVALAGWIKENYGSTMINALQTVMPVKKTVRSVVVRYVAL 124 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 T++ + + R+ + L + A ++A++++G+ + Sbjct: 125 AVDETDEIEYKYMKRNARAKLRLLRTLKGENIIPMSKVTGELGVSSATVKAMQEEGVITV 184 Query: 177 ASETPEF---SDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKT 231 ++ SD A + LN Q + + D +LL GVTGSGKT Sbjct: 185 TEDSCYRKVTSDAVRKEAFMAPDIELNDIQMSIINEFQDDVDKDVHRTYLLHGVTGSGKT 244 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVY+ + V+ QGKQA+V++PEI LT QTI F F V V++S L+ ER + + Sbjct: 245 EVYVQCIRRVIEQGKQAIVLIPEIALTYQTIKYFTRYFGERVTVVNSRLSSGERYDQFER 304 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 AK G+ +VIG RSALFTPF+ LG+I+IDEEH+SSYK +YHAR+ A+ RA E Sbjct: 305 AKKGDVDVVIGPRSALFTPFERLGLIIIDEEHESSYKSDNPPKYHARETAIERARLEGAS 364 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALI 408 +ILGSATP++E+ ++RL + R + + A ++DL+ + + ++ L Sbjct: 365 VILGSATPSVESYKKAMSGEFRLWTMDERVSDRKMADTSIVDLREELRRGNRSIISDELA 424 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH--HLRCHHC 466 + L Q++LF+N+RGF + C +CG + +CP CD T H A + L CH+C Sbjct: 425 EDITDRLSRHEQIMLFINKRGFNSFVSCRNCGEVVKCPHCDVSMTKHMASNGGKLVCHYC 484 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 P +CPSCGS + G+GTE++EQ + +FP R+D+DTTS+K + EQ L Sbjct: 485 GYTVEEPSKCPSCGSRLIGGYGVGTEKVEQEINRMFPVARTLRMDKDTTSKKNSHEQILE 544 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 RG A ILIGTQM+ KGH F +VTLV +L D LF D+R+ ER L TQ AGRAG Sbjct: 545 SFGRGDADILIGTQMIVKGHDFANVTLVGILLADLTLFDGDYRAGERTFDLLTQAAGRAG 604 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R G+VV+QT+ P++ + + Y +F E A R M+ PP + +++ A + Sbjct: 605 RGDVPGKVVIQTYKPDNYAIVAAANQDYRSFYETESAYRSFMRYPPEWNMLVIMAVGEDE 664 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL---QH 703 + + ++ + I + + L V+GP K +R + ++H L ++ Sbjct: 665 EQLANTMDRMYSHIRGNHMNVRHLAVIGPAEPALAKVKDLYRKVLYIKHRDYQVLVDVKN 724 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPIE 731 + L T + + D +P+ Sbjct: 725 CVEEWLRDDETREINSGINVFFDFNPMN 752 >UniRef50_C0EY60 Putative uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EY60_9FIRM Length = 750 Score = 755 bits (1949), Expect = 0.0, Method: Composition-based stats. Identities = 236/743 (31%), Positives = 371/743 (49%), Gaps = 16/743 (2%) Query: 2 PVAHVALPV---PLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASEL 55 A + + + L R F Y +P + V+ G RV VPFG+ G VV++ ++ Sbjct: 7 RYADIIIDISHEALDRVFQYRVPLSLWKEVRPGSRVFVPFGRGNRETEGYVVAIRPEADY 66 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP--ILLRQGRPAANA 113 +++K ++ V + ++ + + Y + L LP ++ Sbjct: 67 EESKIKEILRVNTEGVSVESELIKVASFLKEQYGSTMIQALRTVLPVKAKMKPKEEVFIT 126 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 A ++ A + + L + + V F ++ L ++G+ Sbjct: 127 LSADIEAAQKLLAEWEQKHYVARARFLFLLIEKGRITKEEAVKGCNFPLKEIRRLAEQGI 186 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKT 231 L S + + LN EQ D +LL GVTGSGKT Sbjct: 187 VKLESRIKYRNPFP-ELTKRSTGWPLNEEQQAVADNFQKDYDNGKRGTYLLYGVTGSGKT 245 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL+++E VLA+ KQ +V++PEI LT QT+ RF ERF + V++S ++ E+ A + Sbjct: 246 EVYLALIEQVLAKKKQVIVLIPEISLTYQTVRRFYERFGERIAVINSRMSKGEKSDACER 305 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GEA ++IG RSALF P + LG+I+IDEEHD +YK +YHAR+ AVYRA Sbjct: 306 IRAGEADVIIGARSALFAPTERLGLIIIDEEHDGAYKSDTSPKYHARETAVYRAGLCGAS 365 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALI 408 ++LGSATP++E +Y+L L +RAGNA ++DL+ + + + L Sbjct: 366 VVLGSATPSVEAYARALSGEYKLWTLKKRAGNAMLPTTQIIDLREEFKKGNRSIFSGELH 425 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 ++ + L Q++LFLNRRGFA + C CG + +CP CD T H+ LRCH+C Sbjct: 426 KKIEERLAKKEQIMLFLNRRGFAGFVSCRACGQVIKCPHCDVTLTYHR-NGKLRCHYCGY 484 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + +QCP C S+H+ GLGTE++E L FP + R+D DTT RK A E+ LA Sbjct: 485 EETFIKQCPICKSSHVATFGLGTEKVEAALHAEFPTARVLRMDMDTTRRKHAHEEMLAAF 544 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 +G A IL+GTQM+ KGH + +VTLV +L D +L DFRS E+ QL Q AGRAGR Sbjct: 545 SKGEADILLGTQMIVKGHDYANVTLVGILAADLSLHEQDFRSGEKTFQLLCQAAGRAGRG 604 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K+G+V++QT+ PEH + T Y+ F ++ R++M PP +++ + + Sbjct: 605 DKRGDVIIQTYSPEHYSITTAAEHSYENFFKEEYTYRQLMGYPPCAHMLVILVQSGDESQ 664 Query: 649 APLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 + + ++ +I S + E + +L P A K +R + L+H + L + Sbjct: 665 SVVARLRIEKMIEQSQVGQEVPVQILAPGQASLSKLKDVYRQVLYLKHKDKETLLDLKRR 724 Query: 708 TLALINTIPDSRKVKWVLDVDPI 730 ++ P + D DP+ Sbjct: 725 LEPVLEKHPMFAGITIQFDFDPL 747 >UniRef50_Q604F0 Primosomal protein N` n=1 Tax=Methylococcus capsulatus RepID=Q604F0_METCA Length = 733 Score = 754 bits (1947), Expect = 0.0, Method: Composition-based stats. Identities = 331/734 (45%), Positives = 456/734 (62%), Gaps = 11/734 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V VA+P+P R FDYL P G+ ++ G R+ VPFG + R+G +++V + + Sbjct: 4 VVRVAVPIPAYRCFDYLAPAGVPLESLLPGVRLSVPFGNR-IRVGYLIAVVETPGCEVER 62 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ VLD+ P+ + + +LL WAA YYHHP+G+V+ A P+ LR+G A A Sbjct: 63 LRPAAAVLDAAPLLSETDLKLLRWAARYYHHPLGEVIQSAFPVHLREGGGAELARPSGLV 122 Query: 120 ATEQGQAVDLNSLKRSPKQQQALA--ALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 T G A+D + +R+P Q++ R+ + ++A L + ++ + L + Sbjct: 123 LTPAGAALDPATFRRAPVQRRLFEVLRGRERPLPASRLAELAGSGRTVR-DAARRLVERG 181 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 R AV+G L+LN Q AV I + +LL GVTGSGKTEVY+ V Sbjct: 182 WAEWVDLQDRRIPAVAGPPLQLNPAQLGAVDEISQNLGRYGVFLLEGVTGSGKTEVYIEV 241 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + V+ +G+QALV+VPEI LTPQ R RER AP+ V HSGL+++ER +AWL + GE Sbjct: 242 IRRVITRGEQALVLVPEISLTPQLERRLRERIEAPLAVFHSGLSETERAAAWLGFQKGEV 301 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +++GTRSA+F P + GVIV+DEEHD S+KQQEG+R+ ARD+AV RA IP++ GSA Sbjct: 302 GVLLGTRSAVFAPMRWPGVIVLDEEHDRSFKQQEGFRFSARDVAVMRARMADIPLVAGSA 361 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE++ NVQ+ +Y L L RAG A VLD++ +++Q GL+ LI MR L A Sbjct: 362 TPSLESIRNVQRGRYVRLVLPARAGAAVAPRYRVLDIRARRLQDGLSEGLIAAMRDTLAA 421 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 +QV+LFLNRRGFAPAL+CH CGW+A C RCD LH + LRCHHC ++ +P CP Sbjct: 422 GDQVLLFLNRRGFAPALVCHGCGWVARCRRCDANLVLHARESRLRCHHCAAEHGLPGCCP 481 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG L P+G+GTE++++ L LFP V ++RIDRD+T + +LE+ L V +G IL+ Sbjct: 482 SCGQEDLRPLGVGTERVDEALRRLFPEVGVARIDRDSTRGRRSLERMLERVQQGEVGILL 541 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGHHFP VTLV +LDVD +S DFR+AE AQL QVAGRAGR GK G V+LQ Sbjct: 542 GTQMLAKGHHFPGVTLVGILDVDAGFYSTDFRAAEHTAQLIVQVAGRAGRGGKPGTVLLQ 601 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T HP+HPLLQ LL GY FA LAER LPP+ + RAE + FL +LR Sbjct: 602 TRHPDHPLLQRLLRDGYPGFAAAELAERESACLPPFGYQALWRAESKELALSMDFLARLR 661 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 + + + LGP PA P++ GR+R Q+ L+ R L ++ LA + P+ Sbjct: 662 E---EADGKNGAVHWLGPAPAPMPRQAGRYRAQLWLKSARREELHAVLTDALARLQETPE 718 Query: 718 SRKVKWVLDVDPIE 731 R+V+W LDVDP++ Sbjct: 719 -RRVRWSLDVDPVD 731 >UniRef50_D0KYX5 Primosomal protein N' n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KYX5_HALNC Length = 774 Score = 754 bits (1946), Expect = 0.0, Method: Composition-based stats. Identities = 325/736 (44%), Positives = 444/736 (60%), Gaps = 14/736 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M VALP PL F Y +P ++ +AG RV VP GK Q R+G++ S ++ + + Sbjct: 46 MVYWQVALPGPLQMLFTYGVPADVSARAGMRVWVPLGKGQ-RMGVLWSPAEKETEWV--I 102 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V+ VLD EP+ + L WAADYYH P+G+ + AL LRQGR W Sbjct: 103 KPVLSVLDDEPLLDEELLACLGWAADYYHFPLGETVLAALAPSLRQGRSL---HELAWRI 159 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 G+ + R +Q+ L + Q + +F A L GL + Sbjct: 160 LPSGEQALADGTLRGARQRALLERIAQTPQGVSESQLRDFPKAVRLRLADLGLIEPFE-Q 218 Query: 181 PEFSDWRTNYAVSG---ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 S W +SG LN Q+ AV A+ + + F WLL GVTGSGKTEVYL++ Sbjct: 219 MMPSTWPVLAEMSGNKLPAPDLNEAQSAAVSAVAACLENFGVWLLEGVTGSGKTEVYLNL 278 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + VLAQG+Q L++VPEI LTPQ + RF +R VLHSGLND +RL+AWL A++G+A Sbjct: 279 ISRVLAQGRQVLILVPEIALTPQLVTRFTDRLGLVPAVLHSGLNDGDRLNAWLAARSGDA 338 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +VIGTRSA+F PF +LG+IV+DEEHD S+KQ EG+ YHARD+A++RA +PI+LGSA Sbjct: 339 TVVIGTRSAVFQPFADLGLIVVDEEHDGSFKQSEGFGYHARDVAIWRARRLGVPIMLGSA 398 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+LE+L NV +Y LL L RAG A +LD++ Q+++ GL+ L+ + HL A Sbjct: 399 TPSLESLRNVSLSRYHLLTLPERAGGAAMPDIRLLDVRQQRMRGGLSDDLVAAIETHLLA 458 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV+L+LNRRG+A LLCH CGW+AEC CD + T H+ + LRCHHC +R P CP Sbjct: 459 GGQVMLYLNRRGYASNLLCHACGWVAECAHCDSFMTWHRGVNRLRCHHCGFERQPPSVCP 518 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 +C S L P GLGTEQLE L LFPG I R+DRD SR G L+++LA + AR+++ Sbjct: 519 NC-SATLSPRGLGTEQLEDVLTGLFPGFGIERLDRDALSRVGELDRRLARIQSSEARLIV 577 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ+L KGH FP V+LVA++D D ALF+ DFR AERFAQ QVAGRAGRA + G V++Q Sbjct: 578 GTQILVKGHDFPHVSLVAVVDADQALFANDFRGAERFAQQLIQVAGRAGRASRAGTVLVQ 637 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH PEH L L++ GY +FA+ LAER LPP + ++RA+ + L + Sbjct: 638 THQPEHVGLNRLIHAGYASFAQTLLAERAEAGLPPVRAAAMIRADARDADAPRELLTHMA 697 Query: 658 NLILSSP--LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + + AD L V GPVPA +R GR+R+Q+L+ R RL ++ + Sbjct: 698 DWLHEHLADPADSPLDVWGPVPAPLARRAGRYRYQLLILADDRPRLHAALSQLES-WQGT 756 Query: 716 PDSRKVKWVLDVDPIE 731 ++ ++W +DVDP++ Sbjct: 757 RRTKGIRWSIDVDPVD 772 >UniRef50_D1RB01 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1RB01_9CHLA Length = 746 Score = 752 bits (1941), Expect = 0.0, Method: Composition-based stats. Identities = 251/745 (33%), Positives = 386/745 (51%), Gaps = 26/745 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V L V + +T DY +PE + +A G RV VP + R G ++ + + ++ Sbjct: 8 KYAAVILDVAIEKTLDYGIPEDLVPEAKKGVRVEVPL-RGSLRNGYIMEIKETADYA--R 64 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + + + + ++ L LW + YY P+ V +P +R+ Sbjct: 65 VSPIQRIFPDVQ-ISEDLFELALWISRYYLAPLSQVFKILVPSSIRKDMQHKQQLFVMRK 123 Query: 120 AT-EQGQAVDLNSLKRSPKQQQALAAL---RQGKIWRDQVATLEFNDAALQALRKKGLCD 175 T EQ + V + Q L + ++G + + + + + + L KG Sbjct: 124 QTREQLKEVCETIRNKHSAQAAVLDEMLLVKKGILLSELLEKTGGSRSPVDTLAAKGYLL 183 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEV 233 + + S + + L+ EQ A I + + F LL G+TGSGKTEV Sbjct: 184 VEPVRIDRSPLIGEEYLLTKPKILSAEQQEAFTKIAHSLEAGIFQTHLLYGITGSGKTEV 243 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL +E L K A+++VPEI LT QTI RF+ RF + +LH L+ ER W K + Sbjct: 244 YLQAIEKALQMQKSAIMLVPEISLTAQTIERFKSRFPDNIAILHHRLSHGERFDEWHKIR 303 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPI 352 GEA IVIG RSA+F+P NLG++++DEEH+ SYKQQE YHARD+AV R Q + Sbjct: 304 RGEARIVIGARSAVFSPVPNLGLVIVDEEHEQSYKQQEESPCYHARDIAVMRGKIAQATV 363 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA----GLAPALI 408 +LGSATP++E+ N + KY L L +RA ++ ++D+K + +A + L+ Sbjct: 364 LLGSATPSIESYYNAIKGKYVLSLLKKRAESSLLPSVTIVDMKREFEKAKGFTNFSELLL 423 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 + + L Q ILFLNRRG+ L C C +CP C T + +++ L CH CD Sbjct: 424 NEIEKRLTTGEQTILFLNRRGYHTTLTCPSCQTAIKCPHCSLALTFYYSRNSLSCHLCDF 483 Query: 469 Q-RPVPRQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 P P CP+C T + G+GTE +E++L +FP + RID DTT KG+ ++ L Sbjct: 484 TISPPPSTCPNCKKDTPMKFQGVGTELIERSLHAIFPDIRTIRIDADTTKHKGSHQKLLR 543 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + G A +LIGTQM+AKG HF +VTLV +L+ D +L DFRS+E QL TQVAGRAG Sbjct: 544 DFGTGKADVLIGTQMIAKGLHFSEVTLVGVLNGDASLNIPDFRSSEIAFQLMTQVAGRAG 603 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R QG+V++QTH P++ +Q + Y AF E+ ++ R + PP++S V + N Sbjct: 604 RGITQGKVIIQTHIPDNSTIQLASQQNYTAFFEEEISSRELFNFPPFSSMVKLNFSGSNE 663 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLGPV-PALAPKRGGRWRWQILLQHPSRVRLQHII 705 + F Q R+ + ++ +++VL PV P+ K R+R+Q L++ PS I Sbjct: 664 KETLEFSQIFRSKLQTNLP---EIFVLSPVIPSGHAKVKDRFRFQFLVRGPSIYAANQAI 720 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 + +K ++DV+P+ Sbjct: 721 K---TTLQRTSIPHGMKLLVDVNPL 742 >UniRef50_C5V792 Primosomal protein N' n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V792_9PROT Length = 724 Score = 750 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 264/733 (36%), Positives = 402/733 (54%), Gaps = 12/733 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VAL VPLP FDY + + + + G RV VPF ++ + +G+V+ SEL + ++ Sbjct: 1 MQIVRVALDVPLPTLFDYTVDDAVVL--GQRVIVPF-RRSQLVGVVMECVMFSELAVEKI 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K VV +L + + LL + ++YYH+PIG + ALP LR +P +++ Sbjct: 58 KPVVRILSDSEPISSKLLALLRFCSEYYHYPIGQTVIPALPARLRSDKPITVKHEYHYRL 117 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + +DL +++ + Q + A L+ L + G + Sbjct: 118 LDGAPPIDLIPQRKTAARNMVKMLALQPCNLQQLKTVALTASAQLKWLIEAGWVEAFEVN 177 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 P R + + + L EQ V A+ + + +LL G+TGSGKTEVY+ ++ Sbjct: 178 PLACLPRMHCFANAHK--LTDEQQQVVDAV-TQTSGYRCFLLHGITGSGKTEVYVHLINR 234 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEAAI 299 VL G Q L++VPEI LTPQ F RF + LHSGL+++ERL W +A++G A I Sbjct: 235 VLQTGGQVLLLVPEINLTPQLEHYFLSRFPVATLVSLHSGLSENERLKHWQQAQSGAAGI 294 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+GTR ++F L +I++DEEHD+S+KQQ+G RY ARD+A++RA +PI+LGSATP Sbjct: 295 VLGTRLSVFAELPKLSLIIVDEEHDASFKQQDGLRYSARDVAIFRAKQCGVPILLGSATP 354 Query: 360 ALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 + E+ N +Y +L+LT RA +A + K + G++ L+ + + Sbjct: 355 SFESYHNALNGRYEMLKLTGRALADANLPEIKFIHSKQTVMVDGISEVLLREIAHRITRG 414 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q +LF+NRRG+AP L+C +CGW+++C C LH LRCHHC Q VP CP Sbjct: 415 EQSLLFINRRGYAPVLMCTECGWLSDCKNCAGKMVLHTKDQRLRCHHCGYQIHVPTLCPE 474 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C L+PVG GT+++E+ L FP I R+DRD+T K E +++ I++G Sbjct: 475 CRHPELLPVGSGTQRVERVLIDRFPEARILRVDRDSTRNKRTWEAMRSKITANEVDIMVG 534 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGH FP +TLV +L+ D AL+S+DFR+AE+ QV+GRAGRA K GEV++QT Sbjct: 535 TQMLAKGHDFPALTLVGILNPDSALYSSDFRAAEKLFSQLMQVSGRAGRADKPGEVLIQT 594 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+HP+ + L ++ +A LAER M PP+ ++RAE +L + Sbjct: 595 EFPDHPMYRCLQQHDFEGWAASQLAEREMADFPPFAFQAMLRAEGLVEADVYAYLNMAK- 653 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 L+ + + + G VPA +R R Q+L+Q SR LQ + + + S Sbjct: 654 --LAGVKLNHPVEIFGVVPASLARRANHVRAQLLIQANSRRVLQQFLRVWQPGLADL-AS 710 Query: 719 RKVKWVLDVDPIE 731 K++ LD+DP+E Sbjct: 711 NKLRCSLDIDPLE 723 >UniRef50_C0GIP9 Primosomal protein N' n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIP9_9FIRM Length = 792 Score = 750 bits (1937), Expect = 0.0, Method: Composition-based stats. Identities = 254/793 (32%), Positives = 374/793 (47%), Gaps = 72/793 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSV-SDASELPLN 58 A + + + L R F Y +P M V+ G RV VPFG Q+ G + + +D+S + Sbjct: 4 FAEIIVSIRHNRLDRPFTYRVPSTMDVRVGSRVVVPFGPQR-LEGFCIGLNTDSSLSETD 62 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHA------------------- 99 +K + EVLD P+ T + L W A + D L Sbjct: 63 GIKEIEEVLDEAPLLTEELVDLSAWGAARWLCNRVDFLQAMVPGGVRWTQRKWVEFTGEV 122 Query: 100 ------------------------LPILLRQGRPAANAP-------------MWYWFATE 122 P + R G + Sbjct: 123 EPESPSLCYLRDNGPVKMAAWLKSFPEMDRPGELRRLQQDGIIKLSRRETRGIGKKKILT 182 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 + + K KQ A+ L++G ++ + A +++L K+G+ + Sbjct: 183 AYLINEADQSKLGNKQALAVGILKKGPCALTELEKQGVSRATVRSLEKRGIIKTEETSLR 242 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVLEN 240 + + L Q A+ I A + LL GVTGSGKTEVYL + + Sbjct: 243 RDPLAGEQFIPQQSLSATVAQGEALQQIGDALAGNKPRTVLLHGVTGSGKTEVYLQAIAD 302 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 A G+ ++V+VPEI LTPQ I RF RF V VLHS L+ ER W + GEA + Sbjct: 303 TAAAGRGSIVLVPEIALTPQMIERFAARFGERVAVLHSKLSAGERYDEWCRIAAGEAWVA 362 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSA+F PF+NLG+I++DEEH+S+YKQ E RYHARD+A++RA + ++LGSATPA Sbjct: 363 IGARSAIFAPFRNLGLIILDEEHESTYKQDEAPRYHARDIALWRAGNHDAAVVLGSATPA 422 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV---QAGLAPALITRMRQHLQA 417 LE+ + YRL L R N ++D++ + ++ + L+ + + Sbjct: 423 LESSLQARLGNYRLCPLQERIANRPMPPVEIVDMRQELKDGHRSIFSRPLLAALEKVFAE 482 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 + Q IL LNRRG+A +LC +CG + C C+ H A+ LRCH+C+ Q P P CP Sbjct: 483 EKQAILLLNRRGYATFVLCRECGHVMRCTGCNVALKFHMAEEMLRCHYCEHQEPYPLTCP 542 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C ++ G GT+++E+ L FP V ++R+D DTT+RKGA ++ L A +LI Sbjct: 543 KCSGRYIKHFGTGTQKVEEELRKHFPHVRVARLDADTTTRKGAHQKILNTFKNKEAHVLI 602 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQM+AKG FPDVTLV ++ D A+ DFR+ ER QL TQVAGRAGR G VV+Q Sbjct: 603 GTQMVAKGLDFPDVTLVGVITADTAINLPDFRAGERTFQLLTQVAGRAGRGSAGGNVVVQ 662 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T+ PEH + Y+AF + RR + PP+T V + + + Sbjct: 663 TYTPEHYAILAAKTHDYEAFYAEESVARRELGYPPFTRMVRLLLSGEDEARVIDAASFMV 722 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 +L +LGP P K G++RWQ++++H L + P Sbjct: 723 SLFEG------DADILGPSPCPIEKVRGQFRWQVVVRHCELEPLLAAVEDAAEKFRCSPP 776 Query: 718 SRKVKWVLDVDPI 730 + V+ +DVDP Sbjct: 777 ATAVRLSVDVDPQ 789 >UniRef50_Q1GXV2 Replication restart DNA helicase PriA n=6 Tax=cellular organisms RepID=Q1GXV2_METFK Length = 738 Score = 749 bits (1935), Expect = 0.0, Method: Composition-based stats. Identities = 311/734 (42%), Positives = 427/734 (58%), Gaps = 9/734 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + + VAL VPL FDYL V+ G RV VPFG +++ +GIVV ++DAS++ +L Sbjct: 10 LHILKVALDVPLDGVFDYL--SEAPVQIGQRVVVPFGPRRQ-VGIVVDLADASDVAPAKL 66 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K++++ D EPV + LL + ADYY +P G L ALP LRQ PA + ++ Sbjct: 67 KSIIQYFDQEPVLDGEFFSLLKFCADYYQYPYGQALLSALPARLRQTEPARARQQFCYWL 126 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 GQA D++++ Q+ + A + ++ E + + L E Sbjct: 127 NSAGQAADISAIPVRQAVQRRIFAALRAHGRLNEAELAELSPGWRKGLAALRERGWIEEE 186 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 ++ + S + LN EQ AV +I DTF WLL G+TGSGKTEVY+ +L+ Sbjct: 187 QVYAGLGSTLHASSVQPELNEEQVLAVQSILQYRDTFRPWLLHGITGSGKTEVYIRLLQA 246 Query: 241 VLAQGK-QALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAA 298 VL + QALV+VPEI LTPQ ARFR R P+ LHS L++SERL W A+ G A Sbjct: 247 VLEGNQDQALVLVPEINLTPQLEARFRTRLPQFPLVTLHSNLSESERLQNWRLAQTGAAR 306 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IVIGTR ++FTP L +++DEEHD+SYKQQ+G RYHARD+A+ RA IPI+LGSAT Sbjct: 307 IVIGTRLSVFTPLPGLKFMIVDEEHDTSYKQQDGMRYHARDVALVRAQRRNIPIVLGSAT 366 Query: 359 PALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 PALET N + +Y LL L +RA ++ + +D+ ++Q GL+P L+ ++ L+ Sbjct: 367 PALETWHNARNGRYGLLTLQQRAVSQSQLPQVNCVDVSRVQMQEGLSPQLLKALKVRLER 426 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 Q +LF+NRRG+AP LLC+ C WIA C RC +H Q LRCHHC ++ + RQCP Sbjct: 427 GEQSLLFINRRGYAPVLLCNACHWIAPCMRCSSRLVVHLRQGFLRCHHCGHEQNIVRQCP 486 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 SCG+ L P G GT++LE+TL L P + R+DRD+T RK AL + L+ VH G IL+ Sbjct: 487 SCGNADLHPTGNGTQRLEETLTRLLPEARVLRVDRDSTRRKHALSEMLSAVHVGEVDILV 546 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQMLAKGH FP++TLV +LD D ALFS DFR+AER QVAGRAGRA K GEV++Q Sbjct: 547 GTQMLAKGHDFPNLTLVGVLDTDSALFSPDFRAAERLFAQLMQVAGRAGRADKPGEVLIQ 606 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T PEH L L + + A+A L ER + Q PP +++AE + FLQ Sbjct: 607 TSFPEHQLFNALRVQDFAAYAASLLQEREVAQFPPCEFLALIKAEANEYGPVQRFLQFAA 666 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 + + V PV + G R Q+L Q +R LQ ++ + P Sbjct: 667 DSARA---LGTDALVYDPVRPQMERLKGMERGQLLFQAATRQTLQIVLRQLTPQLRAHPL 723 Query: 718 SRKVKWVLDVDPIE 731 S K++W +DVDP E Sbjct: 724 SNKIRWAVDVDPQE 737 >UniRef50_D1BMC0 Primosomal protein N' n=3 Tax=Veillonella RepID=D1BMC0_VEIPT Length = 727 Score = 747 bits (1930), Expect = 0.0, Method: Composition-based stats. Identities = 224/739 (30%), Positives = 361/739 (48%), Gaps = 21/739 (2%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M VA V + P L + YL+PE V G RV +P G +E GI++ + E P Sbjct: 1 MRVAQVIINRPAKQLHKPLSYLMPEKFGNVLPGTRVLIPLGHSREE-GILIGYDELVEPP 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 L+ +V+VLDSEP FT + +YY GD L + + + AP Sbjct: 60 EFTLRNIVQVLDSEPWFTPEMMDTARRLNEYYLFSYGDALRLFT---VNKTLKSYEAPKE 116 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 W +V S ++ +++ A L G + + ++ ++ + + + Sbjct: 117 EWLVVMPEFSVAQFSERKKKQRELAKYLLEVGGASKALLLAKGYSRIVIKQVSEAKGIVV 176 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAGVTGSGKTEVY 234 + + L Q G I +A ++ +LL GVTGSGKT++Y Sbjct: 177 EARFKATKTTFDELLTEEVNIPLTEAQQAVYGPIQAAMNSHEHKTFLLHGVTGSGKTQLY 236 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++Q K A+++VPEI LT Q + RF E F V V HS L +R + W + + Sbjct: 237 LRATAKCISQDKTAIILVPEIILTDQIVRRFVETFGDEVVVFHSKLTVQQRNNNWERLRR 296 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 ++ I+IG RSA+F P +++G+IV+DEEHD SYKQ++ RYHAR++A++RA + P+IL Sbjct: 297 KDSHIIIGARSAVFAPAEDIGLIVVDEEHDPSYKQEDMVRYHARNVALWRAEAHGCPVIL 356 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 GSATP++ + +Q +Y LL L R ++D+K + + + A+ + Sbjct: 357 GSATPSVTSYYKAKQGEYHLLELPNRIFEQPMPKVTIVDMKEEILHGNYSVFSDAMSRLI 416 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRP 471 + L NQ+I+ LNRRG++ ++C DCG CP CD HQA LRCH+C+ P Sbjct: 417 QHTLDEHNQMIILLNRRGYSTFVMCRDCGETIMCPHCDVAMVYHQAGEELRCHYCEHHEP 476 Query: 472 VPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 +P CP C S + G GT+++E+ L F I+R+D+D T K E L + Sbjct: 477 IPTVCPKCNSKRIKFFGSGTQKVEEELRRHFKSARIARLDQDVTKNKQLAEDILHDFGAH 536 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 IL+GTQM++KGH F DVT V +L D L + ++ER L TQ +GRAGR K Sbjct: 537 KYDILLGTQMVSKGHDFKDVTAVGILTADSVLNIPVYTASERTFDLLTQTSGRAGRGEKP 596 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G VV+QT++P + + Y F + + R+ + PP+ + + + + Sbjct: 597 GSVVIQTYNPLNYAIIKSKAHDYIGFYNEEIKNRKALGYPPFREMIHMVVRHQDMKTLES 656 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 ++ + + S ++ + + GP A K +R I+++ L+ I + Sbjct: 657 IANRIVDDLESYK-GNQDILINGPYEAPIKKVRDMYRLAIMIRGTDLTNLKEYIYNSWIF 715 Query: 712 INTIPDSRKVKWVLDVDPI 730 ++DVDP+ Sbjct: 716 TQEG-------LLIDVDPV 727 >UniRef50_UPI00016C5758 primosomal protein N n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5758 Length = 800 Score = 746 bits (1927), Expect = 0.0, Method: Composition-based stats. Identities = 256/755 (33%), Positives = 373/755 (49%), Gaps = 32/755 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGC--RVRVPFGKQ-QERIGIVVSVSDASELPLNE 59 A V PL + Y +P + K G RV VPFGK + G V V+D E Sbjct: 46 FADVVFDRPLDHAYTYAVPAELVAKIGVGKRVEVPFGKGGKATAGFCVRVTDDEPTSGYE 105 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K V VLD + + + +L W ADYY G VL +P +R A Sbjct: 106 IKTVTRVLDDDAIVDEHLMKLTRWMADYYLCGWGQVLHAVVPAGVRDNAGTRMASFVEPV 165 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 E + L + + + L KKGL SE Sbjct: 166 PRESLPNPLPTVTPQQKAALDKLKKENRPLEILQLARLAKCTAGVVSGLIKKGLVRKFSE 225 Query: 180 TPE----------FSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTG 227 E S+ + + + LN +Q I A + +LL GVTG Sbjct: 226 RIETEASGAHESAESENAQGTDEARKEIELNADQLRVWKPIGEALAAGGYHPFLLHGVTG 285 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVYL +E V+ QGK+ +V+VPEI LTPQTI+RF+ R + V+HS L D+ER Sbjct: 286 SGKTEVYLRAIEEVVKQGKEVVVLVPEISLTPQTISRFQGRCG-NLAVMHSHLTDAERGG 344 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + G +V+G RSA+F P + LG+I+IDEEH++S+KQ+ RYHARD+AV RA Sbjct: 345 YWRRIATGHIHVVVGARSAVFAPTRKLGLIIIDEEHENSFKQESTPRYHARDVAVMRARL 404 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGL 403 E IPI++GSATP+LE+ N ++ Y +L + R + V+DL+ + + Sbjct: 405 EGIPILMGSATPSLESWANAEKGNYTVLSMPNRVASRPMPAVKVVDLRHEPKAPGKPGAI 464 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRC 463 P L MRQ L+ Q+IL LNRRGF+ + C CG++A+C CD T H+ ++ L C Sbjct: 465 GPTLEAAMRQTLKDKGQIILLLNRRGFSTHVHCEACGYVAQCANCDLAMTFHRTKNSLMC 524 Query: 464 HHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 H+C + ++CP+C + GLGTE+L+ + FPG R+D DT S+ G+ ++ Sbjct: 525 HYCGFETAPFQKCPTCAQPSMRYQGLGTEKLQVEIEEKFPGSVCQRMDSDTMSKPGSHQR 584 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 L G +IL+GTQM+AKG FP+VTLV +++ D L DFRSAER QL QVAG Sbjct: 585 VLDAFRDGLIQILVGTQMIAKGLDFPNVTLVGVVNADVGLHLPDFRSAERTFQLLAQVAG 644 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 RAGR + G+V++QT PEHP + + Y+ FA+ L R++ + PP+ + Sbjct: 645 RAGRGTRGGQVLVQTFTPEHPCITLASHHNYNEFAKMELVHRKLHKYPPYERMARMIVRS 704 Query: 644 HNNQHAPL----FLQQLRNLILSS-----PLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + A + I + P + + +LGP + +R+ LQ Sbjct: 705 EKEEAAAAFADVLATAFKEAIRRAMSTGRPSPEAPVRLLGPAECPVFRLNNFYRFHFQLQ 764 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 S L ++ LAL V++ +D+DP Sbjct: 765 SDSSAVLHEVLRNVLALA---KPPHGVEFQVDIDP 796 >UniRef50_B2IAA9 Primosomal protein N' n=8 Tax=Xanthomonadaceae RepID=B2IAA9_XYLF2 Length = 733 Score = 745 bits (1925), Expect = 0.0, Method: Composition-based stats. Identities = 315/742 (42%), Positives = 432/742 (58%), Gaps = 22/742 (2%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGMTV---KAGCRVRVPFGKQQERIGIVVSVSDASEL 55 MP + VALP+PLP+ FDYL P G+ + GCRVRVPFGK+ E IG+VV + S Sbjct: 1 MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKR-ELIGVVVEL--PSAE 57 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 L+ +D P+ + + L W + Y H P+G++L ALP LLR G+P Sbjct: 58 MSVPLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILATALPGLLRHGKPLPETWT 117 Query: 116 -WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC 174 W W TE G+ + S Q A + + A L K+G Sbjct: 118 CWAWRLTETGRTAAPKLRRNSRSAQMAELLTASDQTEDALNTRMNRWRAVAHNLTKRGYV 177 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + + + + LNTEQ AV +++ F +LL GVTGSGKTEVY Sbjct: 178 ERIKKPTTVPVIIQTTSNTVP--VLNTEQQKAVETLNANVG-FKTYLLDGVTGSGKTEVY 234 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L + LA KQALV+VPEIGLTPQ + F R PV LHS L DSER W A+ Sbjct: 235 LQAIATCLAASKQALVLVPEIGLTPQLLTNFHARLGIPVHALHSKLADSERARVWATARC 294 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+GTRSA+FTP N G+I++DEEHD+SYKQQ+G RY+ARD A+ R + +P+IL Sbjct: 295 GEARLVLGTRSAVFTPLPNAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNVPVIL 354 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 GSATP+LE+L N +Y+ LRL+ RAG A VLD++ + ++ GL+P ++T + Sbjct: 355 GSATPSLESLYNAHNGRYKHLRLSYRAGQAYAPQVRVLDVRKRPLKDGLSPEVLTGINAT 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD-----HYYTLHQAQHHLRCHHCDSQ 469 L D QV++F NR G++P LLCHDCGW A C +C T++ +L+CHHC ++ Sbjct: 415 LARDEQVLVFKNRCGYSPVLLCHDCGWTATCHQCSTSVHHTPMTVYSGGTYLQCHHCGAR 474 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P+P CP CGST L P G+GTE+LE L FP P+ RIDR+TT + L+ Q ++ Sbjct: 475 QPMPLSCPDCGSTALQPQGIGTERLEARLIEAFPKHPVVRIDRNTTKHRDGLKTQFTKLG 534 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 A IL+GTQ+LAKGHH P +T+V ++ +D LFSADFR+ E+ +Q QVAGRAGRA Sbjct: 535 N-AAGILVGTQILAKGHHLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAK 593 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEV LQTHHP+HPLLQTL+ GY FA L +R+ LPP+ ++RAE + Sbjct: 594 HAGEVWLQTHHPDHPLLQTLINGGYHTFANTELQQRQAAWLPPFAHLALLRAEAKDTTST 653 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 FL I + + GP+ A P+R G R+Q+LL R L +N + Sbjct: 654 QQFLTT----IRKHMPTNNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNALHRTLNVLI 709 Query: 710 ALINTIPDSRKVKWVLDVDPIE 731 I+ +P++R+V+W LDVDP++ Sbjct: 710 PAIHALPEARRVRWSLDVDPVD 731 >UniRef50_B5JME8 Primosomal protein N', putative n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JME8_9BACT Length = 749 Score = 744 bits (1922), Expect = 0.0, Method: Composition-based stats. Identities = 264/745 (35%), Positives = 387/745 (51%), Gaps = 28/745 (3%) Query: 6 VALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 V L R Y LP M V+ G VRVP G++Q IG++V +LPL +LK V Sbjct: 10 VWLMSGFDRPLHYRLPGSMEAMVEPGSLVRVPLGRRQT-IGLIVEKGCEPDLPLMQLKLV 68 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 ++++ P+ T ++ RL W YY I +VL +P +RQG Y A + Sbjct: 69 LDLVYPTPIMTPALLRLGSWLRQYYGASIQNVLETMIPGPVRQG--MKAKHDKYVTAVKT 126 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQ----VATLEFNDAALQALRKKGLCDLASE 179 A L +L++ +Q L + + + L + AA L KKG + Sbjct: 127 VDAEALAALEKKAPKQFELYQFLAQQFRAQKKSLVLNRLGASPAAYTGLLKKGFITEEAR 186 Query: 180 TPEFSDWRTN----YAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEV 233 E + + + + LN EQAT V +I + TF LL GVTGSGKTEV Sbjct: 187 KVERVAYDDELGDVEYATNQEIVLNKEQATCVQSIIESVRTGTFITHLLYGVTGSGKTEV 246 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF----NAPVEVLHSGLNDSERLSAW 289 Y++ +E L GK L +VPE+ LTPQT+ R R RF +A V HS L+D ERL AW Sbjct: 247 YIAAMEEALKAGKSVLFLVPEVALTPQTVGRLRSRFTEHKDAHAVVWHSSLSDGERLDAW 306 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 + NG A +V+G RSA+F P NLG++++DEEH+ ++KQ E RYH RD+AVYR++ E Sbjct: 307 MALANGTARVVVGARSAVFAPLPNLGLVIVDEEHEPAFKQDETPRYHGRDVAVYRSYLES 366 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAP 405 + +LGSATP+LET NV++ KY+L LT+R + + I HV+D++ + ++ ++ Sbjct: 367 VVCVLGSATPSLETFRNVKRGKYKLDSLTKRIDDRQLPIMHVVDMRIEMMRTRKPVTISS 426 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L ++R + Q ILF+NRRG+ ++C +CG + EC C T H++ + L+CH Sbjct: 427 LLAEKLRDRWEKGEQSILFINRRGYNSTMMCTECGHVEECKHCSLPMTFHRSDNTLKCHL 486 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + P +CP C S + G GT+++E + + P I RID DT +K + L Sbjct: 487 CGHEADPPWRCPECKSDAIRGKGSGTQRIEDVVKSILPKARIVRIDTDTMGKKHLFREIL 546 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 E +G +L+GTQM+AKG FP+VTLV ++D D +L DFR+ ER QL QV+GRA Sbjct: 547 GEFRKGKIDLLVGTQMIAKGLDFPNVTLVGMVDADLSLHVPDFRANERTFQLLVQVSGRA 606 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR GEVV+QT P +Q DAF E + R Q PP+ V N Sbjct: 607 GRGDLAGEVVVQTFTPHADPIQFARRGEVDAFLEVEIESREQFQYPPFRHLVRQVFRSRN 666 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 A F +Q + + K+ + GP P K ++R+ I + L + Sbjct: 667 ADKAMFFAEQFARKVEARMAG--KIEMRGPTPCSIEKMKDQYRFHIWYFTTNVSGLMREL 724 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 A + + V +LDVDP+ Sbjct: 725 KTVEA---EVILPKDVIQILDVDPM 746 >UniRef50_C3RII3 Primosomal protein n n=4 Tax=Bacteria RepID=C3RII3_9MOLU Length = 736 Score = 743 bits (1918), Expect = 0.0, Method: Composition-based stats. Identities = 231/743 (31%), Positives = 363/743 (48%), Gaps = 28/743 (3%) Query: 2 PVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVS-------D 51 + V + P L TFDYL + +G RV + FG Q+ IG V + Sbjct: 7 YIVQVLVEHPTHALDTTFDYL--ANTEIASGVRVTIAFGYQRI-IGYVTGCRYSNSTKEE 63 Query: 52 ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 + + + EV+D P+ + L L A P L LP L+ + Sbjct: 64 LETAAGFKYRYISEVIDERPLLNQELQELSLTLAKLTLSPRISCLQAMLPPQLKPSTNKS 123 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 + + L ++ KQQ+A L+ + ++ L L ++ Sbjct: 124 VGIKYQKVIKVINEDATL----KTVKQQEAYQYLKTHPDTP--LKAFPYSRGLLDKLIEQ 177 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 + + + + + E L +Q V I S DT+ L+ GVTGSGKT Sbjct: 178 RVTVIIEQELYRDPYLDDQKEEHE-FSLTVDQQKVVNGIMSKIDTYHTALIHGVTGSGKT 236 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + + V+ K L++VPEI LTP + F+ +F V +LHS L+ ER + + Sbjct: 237 EVYLHLSKYVIRNNKTVLMLVPEISLTPMMVNAFKHKFGKEVAILHSKLSAGERYDEYRR 296 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 N E IV+G RSA+F P + +G+I++DEEHD SYKQ+ RY +A R P Sbjct: 297 ILNSEVKIVVGARSAVFAPLEKIGLIILDEEHDPSYKQESKPRYQTTQIARIRGQYHNCP 356 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALI 408 +ILGSATP+LE+ Q+ Y L L +R ++D+ + + A+ Sbjct: 357 VILGSATPSLESYSRGQKGIYDLYELPKRINQFPLPKIELIDMADEIRNKNYSLFSKAMK 416 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 +++ L D QVIL LN+RG+A + C DCG + +CP CD T H+A H LRCH+C+ Sbjct: 417 EQIQTCLDHDEQVILLLNKRGYATYVRCLDCGEVIKCPHCDVTLTYHKADHKLRCHYCEH 476 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 Q +PR CP C S L VG GT+++E+ L +F G + R D DTT +K ++ L + Sbjct: 477 QIEMPRLCPHCSSERLKLVGAGTQKVEEQLETIFDGAKVIRYDVDTTKQKDGHQKLLDKF 536 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 R IL+GTQM+AKG F +VT V +L+ D +L DFR+ ER QL QV+GR+GR Sbjct: 537 ARKEGNILLGTQMIAKGLDFENVTFVGVLNADISLNIPDFRANERTFQLLEQVSGRSGRG 596 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 K+G V++QT++PEH +LQ + Y F ++ + R++ PP+ V + + + + Sbjct: 597 QKEGTVMIQTYNPEHFVLQCVKNHDYLRFYQEEMKTRKLAAYPPYVHLVSILIQGKDEEV 656 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 Q++ + +K+ +LGP +L + +R +I+++ + +L ++ Sbjct: 657 VNQSAVQIKEYLQKQL---DKMAILGPANSLIYRMQDIYRKRIMIKFTNSKQLYPVLEKM 713 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 N KV V D +P Sbjct: 714 SDFYN--KKGNKVHVVCDFNPYN 734 >UniRef50_B0VFC9 Primosomal protein n n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFC9_9BACT Length = 789 Score = 741 bits (1914), Expect = 0.0, Method: Composition-based stats. Identities = 238/791 (30%), Positives = 380/791 (48%), Gaps = 68/791 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + LP+ +P+ Y + G RV V + GI + + E Sbjct: 1 MHYYVIHLPLEIPKELIY--CSSAEIVEGARVIVNLSGRLW-TGICGAKTRPEEDKDIRY 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR------------ 108 KAV+EVLD+ PV + + +L W ADYYH +G LF LP L Sbjct: 58 KAVIEVLDTVPVLSPELMKLGYWMADYYHCSVGKALFAMLPARLLPEMEANVIWLSENVP 117 Query: 109 ---------------------PAANAPMWYWFATEQGQAVDLNSLKRS------------ 135 + E+G+ + L ++R Sbjct: 118 EPFIPLKKAIDKSENPVLKTLRKELTSYPLYKRIEEGEELGLLKIERRLNHKDKPRTVNF 177 Query: 136 ---------------PKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 +++ + + + + +A++AL KKG + Sbjct: 178 IIRLQPTLEEDTLPLKQREAWEKIKEEEPSFPMSNISSTISYSAIKALVKKGFIKIEPRR 237 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 E + +++ LN Q A+ I TF+ LL G+TGSGKTEVY+ ++ + Sbjct: 238 FEPESVSFENSSPLKQITLNYAQVEAIKDITEGFGTFNVNLLYGITGSGKTEVYIELIRH 297 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L+ K + ++PEI LTPQ + RF+ F + + HS L + +RL W K K+GE IV Sbjct: 298 YLSVNKTVIFLIPEIALTPQMVDRFQSNFGQILAIQHSQLTEKDRLIQWQKIKSGEKRIV 357 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSA+F P +LG+I++DEEH+ +YKQ+ RY RDLA+ RA + +ILGSATPA Sbjct: 358 IGARSAVFAPLPDLGLIIVDEEHEGTYKQESAPRYQGRDLAIVRAQIQNAQVILGSATPA 417 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE+ N Q KY+L ++ R + V+DL+ + + ++ L+ + + LQ Q Sbjct: 418 LESWHNAQNGKYKLQKIESRPLDYCLPDVQVVDLRDEYEHSLISAPLLEAIDKRLQRKEQ 477 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 VILF NRRG++ + C CG + C C+ + H+ + ++CH+C + P PR+CP CG Sbjct: 478 VILFQNRRGYSSFMQCLKCGKLITCKNCEISMSYHRDREEMQCHYCGNTIPSPRKCPYCG 537 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 S GT+++EQ L LFP I R+D D+ ++ + + IL+GTQ Sbjct: 538 SYSFAYGAPGTQKIEQNLKILFPEAKILRMDSDSARKRDTYKSMYNRMKNKEVDILLGTQ 597 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 M++KG FP VTLV ++ D +L DFR+AER QL TQVAGR+GR K GEV++QT++ Sbjct: 598 MISKGLDFPLVTLVGIVMADISLNLPDFRAAERTFQLLTQVAGRSGRRDKAGEVIIQTYN 657 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN-- 658 PEH +++ + Y FA + L R+ + PP+ + + + + + +R Sbjct: 658 PEHYAIESASQQNYIRFATEELGYRKKLYYPPYYRLARILFQSTDLETLKKEMSNMREVL 717 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 +L + +L +LGP A K +R+ ++ + + LQ+ I +L N Sbjct: 718 YLLRKQIPMPQLLLLGPSVAPFSKISSYYRYHLIFKAQTVKILQNAIRLFNSLYNC---P 774 Query: 719 RKVKWVLDVDP 729 ++ +D+DP Sbjct: 775 SNIRKQIDIDP 785 >UniRef50_C4K9E5 Primosomal protein N' n=3 Tax=Betaproteobacteria RepID=C4K9E5_THASP Length = 724 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 289/733 (39%), Positives = 404/733 (55%), Gaps = 12/733 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + VALP+PLP+ FDY + G V+VPFG+ ER G++V + + + L + Sbjct: 1 MAIVRVALPIPLPQAFDYTAADAGVGDVGRCVKVPFGRG-ERTGLIVGIGGEAGVELARI 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF- 119 K V+ + P L+ + A YYH P+G+V+ ALP LR+ ++ Sbjct: 60 KPVLHIQRGVPALPADWLELVSFVARYYHAPLGEVVALALPPGLRRADGVSDEDEDPLLG 119 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 +G + + S A + WR V A+ L ++G ++ Sbjct: 120 VAPKGGEALCAARRASRALALLQALAAEPGPWRRSVIRAREGGEAVGELLRRGWLEIV-- 177 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +D + + L EQA AV AI A F WLL GVTGSGKTEVYL + Sbjct: 178 ----ADPGARHEAGAQPLA-TPEQAAAVDAIVGAGMRFRPWLLHGVTGSGKTEVYLRLAA 232 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEAA 298 + LAQG+Q L++VPEI LTPQ R +RF A V LHS L D R +++A +G A Sbjct: 233 HALAQGRQVLMLVPEIALTPQLEQRVAQRFAAANVVSLHSALADGARSRGFVQALSGRAD 292 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IV+GTR A+F P LG+I++DEEHD+SYKQQEG RY ARD+AV+R +P++LGSAT Sbjct: 293 IVLGTRLAVFAPLPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRGRQRDVPVVLGSAT 352 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P+LE+ + + ++Y L RL+RRA A +D + K+ GL+PAL + Q L+ Sbjct: 353 PSLESWFHARSERYALQRLSRRAVAATLPAVRCIDTRRTKLDEGLSPALHVAITQRLERG 412 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ++FLNRRG+AP L C CGW++ CP C +H A LRCHHC P+P CPS Sbjct: 413 EQSLVFLNRRGYAPVLSCPSCGWVSRCPHCSANLVVHLADRRLRCHHCGCDGPIPHACPS 472 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG + P G GT+++E LA LFP + R+DRD + E L + G A IL+G Sbjct: 473 CGDQDIQPFGRGTQRIEARLAELFPQARVLRVDRDAARTRSQWETLLDTIAAGEADILVG 532 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGR GEV++QT Sbjct: 533 TQMMAKGHDFPKLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRGALPGEVLIQT 592 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 +P HPL L +DAFA AL ERR PP+T ++RA+ + A FL+ R Sbjct: 593 EYPMHPLYLHLAKHDFDAFARMALQERRAAGFPPFTHQAMLRADAPALEDAVEFLRHARR 652 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 L A L + PVP + R R Q+L++ R LQ + +A++ + Sbjct: 653 LAEERAPA--GLRLYDPVPMRMTRLARRERAQLLVEADHRGPLQAFLAEWVAVLYRQRTA 710 Query: 719 RKVKWVLDVDPIE 731 R+++W LDVDP+E Sbjct: 711 RELRWQLDVDPLE 723 >UniRef50_A9M290 Primosomal protein N' (Replication factor Y) (Superfamily II helicase) n=32 Tax=Neisseriaceae RepID=A9M290_NEIM0 Length = 733 Score = 740 bits (1910), Expect = 0.0, Method: Composition-based stats. Identities = 274/736 (37%), Positives = 392/736 (53%), Gaps = 11/736 (1%) Query: 1 MPVAHVALPVPL-PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M +A+ VPL Y + + G RV VPF + + +G+V A ++ Sbjct: 5 MIYHRIAVNVPLSDGLLTYSHSDPLP--PGTRVLVPF-RNKTVVGMVWETDIAPDMDTAR 61 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 + ++ EP S LL + + YYH+P G +F ALP L++ R ++ Sbjct: 62 ILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGLKETRAVEMPQPPLFY 121 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA-LQALRKKGLCDLAS 178 A + L R K+ AL G + + + A ++ ++G + Sbjct: 122 ALNEAGRAQTPPLARFNKKAALWDALLSGGMTMAALKQVNAQAAKLIEDWAEQGWIETTE 181 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 A E LN +Q A AI +A F +LL G+TGSGKTEVY + Sbjct: 182 AAKPVLRSCNGQASHSE-FVLNADQQKASDAIQTALGRFQPFLLYGITGSGKTEVYFDAM 240 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 VLAQG+Q L ++PEI LTPQ + R RF + P VLHS + +R +L+A G+A Sbjct: 241 AKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLHSQMAAGKRTQDYLRAMLGQA 300 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +VIGTR A+FTP ++G+IV+DEEHD S+KQ RYHARDLAV+RA PIILGSA Sbjct: 301 KLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRYHARDLAVWRAKQGGCPIILGSA 360 Query: 358 TPALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 TP+LE+ Q YRLL+LT RA A+ +L++ K+ G +P + ++Q+ + Sbjct: 361 TPSLESWHKAQSGAYRLLQLTERAHTAAQLPQVDILNVGRLKLDNGFSPQALQLLKQNFE 420 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A +++LNRRGFAPAL C DCG+ CP C LHQ LRCHHCD + P+P +C Sbjct: 421 AGGMSLVYLNRRGFAPALFCGDCGYTFGCPNCSAKMVLHQRVRQLRCHHCDHREPIPFKC 480 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P CG+ L VG GT+++E+TL P + R+DRD+T+ K + IL Sbjct: 481 PDCGNQDLTAVGHGTQRVEETLRAFLPKAAVVRVDRDSTAHKNDWADLYRRIADNEIDIL 540 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH F + LV +L+ DG+L+SADFR+ ER QV+GRAGRA K G+V++ Sbjct: 541 VGTQMLAKGHDFARLNLVIVLNADGSLYSADFRAPERLFAELMQVSGRAGRADKPGKVLI 600 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT PEHP+ + + Y FAE L ER+M +PP+ VRA+ A FL Sbjct: 601 QTQLPEHPVFAAVKAQDYVVFAENELNERQMFAMPPFGFQTAVRADAPRVADAMEFLNAA 660 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 + + +PL E + G P L + R R QI L+ SR L ++ + ++ Sbjct: 661 KETL--APLLPESVSQFGAAPMLMVRLAERERAQIFLESTSRQDLHRAVSLWVQVLQQNR 718 Query: 717 DSRKVKWVLDVDPIEG 732 D + ++W +DVDP E Sbjct: 719 DGK-IRWSVDVDPHEA 733 >UniRef50_Q1DCD8 Primosomal protein N' n=6 Tax=Cystobacterineae RepID=Q1DCD8_MYXXD Length = 795 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 279/743 (37%), Positives = 396/743 (53%), Gaps = 22/743 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A +A+ P+ F Y LP+ + ++ G RV VPFG+ G + + L Sbjct: 55 LASIAVGRPVRGEFTYTLPDELAGRLEPGQRVLVPFGRGTAL-GFYLGPASPPTGEKVRL 113 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAV VL+ P + LL +AA +Y +P+G+V+ ALP L + A Sbjct: 114 KAVQRVLEDSPSLPKDLIALLRFAAVHYRYPLGEVIRGALPPGLSKAVDEKEARPDVQHF 173 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQ---GKIWRDQVATLEFNDAALQALRKKGLCDLA 177 L R+P Q ALA L + + L+ L +G L Sbjct: 174 AVALVNEVPPELSRAPAQSAALAYLLAVGGSAPLEEVAHAIPGARETLKKLATRGFARLE 233 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYL 235 +T E S + G L EQ A + +A D TF +LL GVTGSGKTEVYL Sbjct: 234 EKTVEAS--VKEGLIQGRPDHLTPEQDAAGVVLRAALDAATFQPFLLHGVTGSGKTEVYL 291 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 E+ L+ GK +L++VPEI LTPQ + RFR RF A V VLHS L D ERL W + G Sbjct: 292 RAAEHALSLGKGSLILVPEIALTPQLVGRFRSRFGAEVAVLHSALKDRERLFHWQALRRG 351 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 + I +G RSA+F P NLG+IV+DEEHD S+KQ+E RY ARDLAV R ++LG Sbjct: 352 DVKIAVGVRSAVFAPVDNLGLIVVDEEHDPSFKQEEKLRYQARDLAVVRGKQAGAVVVLG 411 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--------LAPAL 407 SATPALETL NV++ +Y+LL L R + ++DL+ ++ + G L+P L Sbjct: 412 SATPALETLENVKRGRYQLLELKHRVDDRPMPTIELVDLRVERPREGVVTEEAPILSPPL 471 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + M + + QVILFLNRRG + LLC CG +C CD T H++Q+ + CH+C Sbjct: 472 LEAMAETIGRGQQVILFLNRRGHSTVLLCEVCGLSLKCSECDVCLTHHRSQNRVVCHYCG 531 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 PVP QC C L +G+GTE++E + P ++R+DRD+ S L + LA Sbjct: 532 LAMPVPEQCLECTGPMLK-LGIGTERVEAEVLERIPTARVARLDRDSASSAERLTEMLAS 590 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 R +L+GTQM+AKGH FP VTLV ++ D +L DFR+AER L TQV+GRAGR Sbjct: 591 FARRELDVLVGTQMVAKGHDFPGVTLVCVVMADTSLSIPDFRAAERTFHLLTQVSGRAGR 650 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 G V++QT++P+ ++ +L +D FA Q L R+ + PP++ VR E + + Sbjct: 651 GKDPGRVLVQTYNPDAEPVRRVLAHDFDGFANQELEWRKALAYPPYSRMAAVRLEGEHPE 710 Query: 648 HAPLFLQQLRNLILSS-PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 + L N++ P A + +LGP A + G+ RWQ+LL+ P+ L ++ Sbjct: 711 QTASVARSLGNIVSRHMPPASAGVRMLGPALAPISRIRGKTRWQLLLKGPTHTALAPLLA 770 Query: 707 GTLALINTIPDSRKVKWVLDVDP 729 A + +P + VK V+DVDP Sbjct: 771 RLEAALVDVPSA--VKVVIDVDP 791 >UniRef50_B5ENF9 Primosomal protein N' n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ENF9_ACIF5 Length = 720 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 321/728 (44%), Positives = 430/728 (59%), Gaps = 19/728 (2%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 +A+ VPL R F Y P ++ G RVRVPFGK R+GIV+ + S P LK + Sbjct: 8 IQIAVMVPLRRIFSYAPPPEGRLQPGMRVRVPFGKGS-RVGIVLGYA--SCPPDVTLKPI 64 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +VLD+ PV ++ +L+ + A YYHHPIGD ALP LLRQGRP + + Sbjct: 65 GQVLDAHPVLPSALQQLVQFGAAYYHHPIGDAWATALPTLLRQGRPLPEPAPQGYRLSID 124 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 + QQAL A + A L+ ++G + E Sbjct: 125 EAQTAQRQPGK---LQQALREHLITHRVVHTTAIPKELRATLRQAVRRGWIEAVMEDTPP 181 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + + LNTEQA+AV + A F+AWLL GVTGSGKTEVYL + L Sbjct: 182 TQVAPS------PHCLNTEQASAVTQLRMARG-FNAWLLEGVTGSGKTEVYLEAIRPHLE 234 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 G Q LV+VPEIGLTPQ + R + RF A V LHS +D ERL W A G ++IG Sbjct: 235 SGAQILVLVPEIGLTPQLVERCQMRFGARRVAALHSAQSDGERLRIWAAAAAGRIQVIIG 294 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+F P L +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSATP+LE Sbjct: 295 TRSAVFVPLPRLAMIVVDEEHDPSFKQQNGWHYSARDLAIQRARLENIPIVLGSATPSLE 354 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 +LCN Q+ +YR L+L +RA +A + ++ L+ + +Q G++ L+T ++ L+A NQV+ Sbjct: 355 SLCNAQKGRYRHLQLRQRATSADLPVMTIVPLRRENLQGGISTTLLTACKETLEAGNQVL 414 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LFLNRRG+APA+LCHDCG + +CPRC T H+ Q LRCHHC + P+ CP+C ST Sbjct: 415 LFLNRRGYAPAVLCHDCGHVIQCPRCSAPMTWHRRQERLRCHHCGHESRWPQACPACHST 474 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L+ G GTEQLE+ L FP PI RIDRD + +L +A++ + A IL+GTQML Sbjct: 475 ALITAGQGTEQLEEVLRQRFPQTPIWRIDRDALHDRDSLATAVADIRQNRAAILVGTQML 534 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGHHFP VTLV +++ D LFSADFR+ ER Q QVAGRAGR + G+V+LQTH PE Sbjct: 535 AKGHHFPAVTLVGIINTDQGLFSADFRAPERLLQTVVQVAGRAGREERPGQVLLQTHLPE 594 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPLLQ+L Y AE L ERR LPP+ + ++RAE H FL + Sbjct: 595 HPLLQSLARGDYRPPAEALLNERRAAGLPPFAALTLLRAEAHQRYRVDTFLSAACQCVPP 654 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 + + + GP+P+L +R G R ++ +Q P+R ++Q +N L + + +R V+ Sbjct: 655 AL-----VEISGPLPSLMERRAGFERAELWVQAPNRTQMQKALNLWLPQLAGLSSARHVR 709 Query: 723 WVLDVDPI 730 W LDVDP+ Sbjct: 710 WTLDVDPL 717 >UniRef50_A9KMA0 Primosomal protein N' n=7 Tax=Clostridiales RepID=A9KMA0_CLOPH Length = 792 Score = 739 bits (1907), Expect = 0.0, Method: Composition-based stats. Identities = 235/793 (29%), Positives = 374/793 (47%), Gaps = 63/793 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQ-QERIGIVVSVSDASE 54 M A + + + L +T+ Y +P + G V +PFG + G +V +SD + Sbjct: 1 MQYADIIVDISVENLDKTYQYSIPPALCADAVIGVPVTIPFGNGNRSISGFIVGLSDVPK 60 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 + +K+++ + D + L + + Y + D L +P+ + Sbjct: 61 IAPERIKSILGIKDKGLPIEGQMIALAAFVKEQYGGTMNDALKTVIPVKKSVKQIEKRIV 120 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKKG 172 + A K+ + + L A + + D V L + + +L++ G Sbjct: 121 SSAVSKEKLQDAYIEAEKKKHKAKARLLLALMNSEEIEFEDIVNKLNISRTTINSLKESG 180 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGK 230 + + SET + + + LN EQ V + + +L+ G+TGSGK Sbjct: 181 IIQIESETKYRNPIASKT-TDSYSISLNYEQQEIVSKVLKDYEEGIRKTYLIHGITGSGK 239 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ +++ V+ G+Q ++++PEI LT QT+ RF +RF + +L+S ++ ER Sbjct: 240 TEVYMGIIDQVIQSGRQVIMLIPEIALTYQTVVRFYKRFGNRISILNSKMSAGERYDQIE 299 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +AKNG+ I+IG RSALFTPFK+LG+I+IDEEH++SYK + +YHAR++A+ R Sbjct: 300 RAKNGDIDIMIGPRSALFTPFKDLGLIIIDEEHETSYKSEMPPKYHAREVAIKRGELSNA 359 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---AGLAPAL 407 IILGSATP+LE ++ L LT+RA A+ + ++DLK + + + + L Sbjct: 360 SIILGSATPSLEAYKKAMDGEFELFHLTKRAKEAKVPMVSIVDLKEELKKKNKSIFSDLL 419 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + + L+ Q++LFLNRRG+A + C CG +CP CD T H L+CH+C Sbjct: 420 RSLIEDRLRKKEQIMLFLNRRGYAGFVSCRSCGTAMKCPHCDISLTAHS-TGVLKCHYCG 478 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + P P CP CGS ++ G GT+++E + FP + R+D DTT K + E+ L+ Sbjct: 479 YEIPTPNICPVCGSKYIAAFGTGTQKVEAMVLKEFPTARVLRMDADTTKNKLSYEEILSS 538 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 G A ILIGTQM+ KGH F VTLV +L D +L++ D+R+AER QL Q AGRAGR Sbjct: 539 FANGEADILIGTQMIVKGHDFAGVTLVGILAADLSLYANDYRAAERTFQLLAQAAGRAGR 598 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 GEVV+QT+ PEH + T + Y AF EQ + RR+M+ PP + + + + Sbjct: 599 GELIGEVVIQTYQPEHYAVTTAATEDYVAFYEQEMNYRRLMKYPPAAHIMAILIQSKEEE 658 Query: 648 HAPLFLQQLRNLILSSPLA----------------------------------------- 666 L L + A Sbjct: 659 VVILAADLLAGAVKEWLKAKVELINQDKPDEQNKFIEQGKFEFKEQDKFKEQGKIENYLE 718 Query: 667 -------DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + ++GP PA K +R + L+ L + + I + Sbjct: 719 NNEQDDNKPNISIIGPAPAGIAKMNDIYRRVLYLKEEQYEYLVEVKDFLEQYITVSEYFK 778 Query: 720 KVKWVLDVDPIEG 732 K D DP+ Sbjct: 779 KCNVQFDFDPMNS 791 >UniRef50_UPI0000E0E458 primosome assembly protein PriA n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0E458 Length = 772 Score = 738 bits (1906), Expect = 0.0, Method: Composition-based stats. Identities = 317/759 (41%), Positives = 438/759 (57%), Gaps = 35/759 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASEL----- 55 M + +A+PVPL +TF+Y V+ G RV+V F + +G+VV ++ + Sbjct: 19 MAILAIAVPVPLRKTFNYTY--AQPVELGVRVQVSFANR-PLVGVVVGCVNSIDEIPLEQ 75 Query: 56 --PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 N+ K + VLD P+ + S LL W A YY HP+G+V+ ALP LR+ + + Sbjct: 76 QGDPNKYKPIDAVLDDTPMLSQSWLSLLHWLASYYQHPLGEVVQTALPNALRKPQSSQPT 135 Query: 114 PMWYWFATEQGQAVD-----------LNSLKRSPKQQQALAALRQGKIW------RDQVA 156 + + QA++ LKR+PKQ + Sbjct: 136 LINVLALSPTLQAINVPGNDITQTVPFIHLKRAPKQFALACFVAAKTQSGTVDSLTKDEV 195 Query: 157 TLEFNDAALQALRKKGLCDLASETP----EFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 F+ A + AL KK + + F + L N EQ+ A+ I + Sbjct: 196 KQHFSSALINALIKKEILIESQHQLTSGCWFDRVGAEHFAHIAELPANVEQSVAISGISA 255 Query: 213 AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP 272 + FS +L+ G+TGSGKTEVYL V+ VL Q +Q L++VPEIGLTPQT++RF RF Sbjct: 256 QLNQFSCFLIEGITGSGKTEVYLQVINKVLQQRQQVLILVPEIGLTPQTVSRFESRFGIT 315 Query: 273 VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG 332 V VLHSGL D+ERL W +A+ + IVIGTRSA+FTP LG+I+IDEEHD S+KQQ+G Sbjct: 316 VGVLHSGLTDTERLVVWQQARLNQIGIVIGTRSAIFTPLPELGMIIIDEEHDDSFKQQDG 375 Query: 333 WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVL 392 RYHARDLA+ A + IPI+LG+ATP LE+L K++ +L +RAGNA A H++ Sbjct: 376 LRYHARDLAIMLAQKQGIPIVLGTATPVLESLHRALTGKFQHFKLEQRAGNATVAPVHLI 435 Query: 393 DLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 D+ Q + GLAPA + M+ HL NQV+LF+NRRGFAPA++C CG + +C CD Sbjct: 436 DICQQPLHYGLAPATLDVMQSHLSQGNQVLLFINRRGFAPAVVCSSCGHVEDCHACDKPM 495 Query: 453 TLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDR 512 T H+ Q + CH C +Q P C CG++ L+ G+GTEQLEQ L LFP RID Sbjct: 496 TYHKTQSRMVCHQCLAQASAPHHCSVCGASELITQGIGTEQLEQGLNELFPQYSTIRIDS 555 Query: 513 DTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAE 572 D+ K L Q + V++ +IL+GTQ+LAKGHHF VT V ++DVDGALFSADFR+ E Sbjct: 556 DSMRGKHTLSQTIEAVNQRKHQILLGTQILAKGHHFAHVTCVVIMDVDGALFSADFRAPE 615 Query: 573 RFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 + AQL TQ++GRAGRA K GE LQT P HPLLQ L+ GY FA AL ER LPP Sbjct: 616 KLAQLITQISGRAGRADKPGETFLQTTQPGHPLLQDLVNNGYGHFARFALHEREQAALPP 675 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQIL 692 +T VI+RAED + Q A LQ R+L+ + + + +GPVP L K+ R R+ ++ Sbjct: 676 FTYQVILRAEDESPQRATQLLQFARHLLTNM----QNISTIGPVPCLIEKKQTRHRYMLI 731 Query: 693 LQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 +Q P R Q +++ + + +V+W +DVD I+ Sbjct: 732 IQSPYRNLRQKVLDTIIDDYAKYANKLRVRWSIDVDNID 770 >UniRef50_A6BZI9 Primosomal protein N n=2 Tax=Planctomyces RepID=A6BZI9_9PLAN Length = 800 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 250/748 (33%), Positives = 385/748 (51%), Gaps = 21/748 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERI-GIVVSVSDASE-LP 56 + +A + L P+ R F Y +PE + ++AG RV+VPFG+ + G V V E LP Sbjct: 55 LYLAEIVLNRPVDRVFHYKVPEELRPLLRAGHRVQVPFGRGNQLAPGYCVGVGPGDENLP 114 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK+V +LDS P+F + +L W AD Y G VL +P ++ ++ Sbjct: 115 SVRLKSVEAILDSRPLFNAKMLKLTRWIADRYLCSWGQVLDCVVPAGVKNQAGTRMVTVF 174 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALR---QGKIWRDQVATLEFNDAALQALRKKGL 173 + K KQ+ AL+ + + E + +L+KK + Sbjct: 175 EVVPVPGEAEQNEIIEKLPAKQRAVYDALKSAARPLTLDELTQAAECGSGPVNSLKKKAV 234 Query: 174 CDLASETPEF----SDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTG 227 + ++ D + + L+LN +Q A+ I +A ++L GVTG Sbjct: 235 ISSHQKRMQYFENDDDVVHAHIQKQDDLKLNRDQRLALDQILTAIRGQQSETFVLHGVTG 294 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVY+ + V++ G+QA+V+VPEI LTPQ I RFR RF V VLHS L DS+R Sbjct: 295 SGKTEVYIQAIREVVSYGQQAIVLVPEISLTPQAIQRFRSRF-DSVAVLHSHLTDSDRHY 353 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W G+ +++G RSA+F P +LG+I+IDEEH++S+KQ+ RYHAR++A R+ Sbjct: 354 HWQNIAAGKVQVIVGARSAVFAPAPHLGLIIIDEEHETSFKQETAPRYHAREVARKRSEL 413 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLA 404 E++P+ILGSATP L + V +KK L+ + RR + +++D++ + + Sbjct: 414 ERVPLILGSATPTLNSWLRVIEKKDTLISMPRRVNDLPMPNVNIIDVRNDVQIRRNESIG 473 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 L T M+ L A QVILFLN RG++PAL C CG +CP C+ T H+ ++ CH Sbjct: 474 RVLFTGMQHALGAGGQVILFLNLRGYSPALWCKGCGNSVKCPHCEISLTWHRDKNLAVCH 533 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 CD P CP CG+ L VG GT++LE+ + FPG R+D DT G+ + Sbjct: 534 SCDFSAKPPTNCPGCGAPGLRFVGAGTQRLEEEVKAKFPGYSCQRMDSDTMRGVGSHARV 593 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L G IL+GTQM+AKG FP+VTLV ++D D L D ++ER QL QVAGR Sbjct: 594 LNAFAGGEVDILLGTQMIAKGLDFPNVTLVGVVDADTMLHQPDLFASERTFQLIAQVAGR 653 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 GR + G V +Q+ P P + + FA L R+ M PP++ + V Sbjct: 654 TGRGMQGGRVFVQSASPTEPAIVKAADHDFLGFARLELGHRKEMLAPPFSHYARVILRGP 713 Query: 645 NNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 +H F +QL ++ + + ++ +LGP PA + +R+ L + + Sbjct: 714 QEEHVEHFARQLATILSDAASEKQLQVQILGPAPAPIIRLKKYFRYHFQLAA---LEVDQ 770 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPIE 731 I+ + +P + +++++DVDP+ Sbjct: 771 ILQLWHEVEGKLPREKGIEYIIDVDPVN 798 >UniRef50_B1ZW59 Primosomal protein N' n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZW59_OPITP Length = 745 Score = 737 bits (1904), Expect = 0.0, Method: Composition-based stats. Identities = 254/739 (34%), Positives = 370/739 (50%), Gaps = 27/739 (3%) Query: 13 PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 + Y +P+ M V+ G VRVP + R+GIV + + P+ +LKAVVEVL Sbjct: 12 DKLLHYKVPDPMRDAVQVGSLVRVPVL-RTMRLGIVGEIGVPKDFPVEKLKAVVEVLHPF 70 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 P T + +L W A YY + V+ LP +R+G + + + Sbjct: 71 PALTPELLQLARWMAGYYACGVDSVIETMLPAAVRRGATVKHEKSLALVRRLTPDELTVL 130 Query: 131 SLKRSPKQQQA---LAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF---- 183 K++P+Q + LA + ++ ++ L A AL K+G E Sbjct: 131 E-KKAPQQARLYRLLAQQFRPQLKSLVLSRLGVTAAVATALIKRGFVREELRRVERVAYA 189 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVLENV 241 D+ V+ + LN EQA V + S F LL GVTGSGKTEVYL ++ Sbjct: 190 DDFAHGELVAAQPHTLNPEQAAVVADLESRLGEQKFGVALLHGVTGSGKTEVYLRGIDTT 249 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERF-----NAPVEVLHSGLNDSERLSAWLKAKNGE 296 L G L +VPE+ LTPQT+AR R R V HS L+D ER WL GE Sbjct: 250 LKAGGGVLFLVPEVALTPQTVARLRSRLEAIAPGHRCVVWHSHLSDGERFDGWLALATGE 309 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+G RSA+F P NL +I++DEEH+ +YKQ E RYH RD+AV RA +LGS Sbjct: 310 ARIVVGARSAVFAPVANLRLIIVDEEHEPAYKQDETPRYHGRDVAVMRAKLTGAFCVLGS 369 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMR 412 ATP+LE+ N KYRLL LT+R N + V+DL+ + ++ L+ L+ M+ Sbjct: 370 ATPSLESFANALAGKYRLLTLTQRVDNRQLPNIDVVDLRIEAMKHRSLTALSDKLVNAMQ 429 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 + Q ILF+NRRG++ ++LC CG + ECP C T H+A LRCH C Q+ Sbjct: 430 ARFERREQTILFINRRGYSSSMLCTKCGHVEECPHCSIAMTYHRADEMLRCHLCGEQKAA 489 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P +CP CG+ + GLGT+++E+ + + P I R+D D ++K + L++ G Sbjct: 490 PARCPQCGAPDIRWRGLGTQRVEEAVRRVLPRARIERMDTDAMAKKNRFREVLSQFRAGK 549 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 +L+GTQM+ KG FP+VTLV L+D D ++ DFR+ ER QL QVAGRAGR + G Sbjct: 550 IDVLVGTQMIGKGLDFPNVTLVGLIDADMSMHIPDFRANERTFQLLVQVAGRAGRGDRAG 609 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 +VV+QT P+ +Q + FAE L R+ PP+ + N + F Sbjct: 610 DVVVQTFTPQAEAIQFSRRADFAGFAESELKLRKEFHYPPYRHLIHHLFRGPNPEKLKFF 669 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 +Q L+ + + GP + K +RWQ+ + +++ + A Sbjct: 670 AEQWARLVEKELGQI--VELRGPSASPIEKIKDEYRWQLWYFTHAVIKVVPALAKLRAGF 727 Query: 713 NTIPDSRKVKWVLDVDPIE 731 + VLDVDP+ Sbjct: 728 A---WPDDITQVLDVDPVN 743 >UniRef50_Q3AC17 Primosomal protein N' n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AC17_CARHZ Length = 718 Score = 737 bits (1903), Expect = 0.0, Method: Composition-based stats. Identities = 228/736 (30%), Positives = 362/736 (49%), Gaps = 32/736 (4%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A VAL P L R + Y LP V G +V+ F + E G + S+ + Sbjct: 4 YAQVALLRPSRHLDRLYTYKLPSSDIKKVAIGAKVKFNFNNRLEE-GFIFSLGQEKDFS- 61 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 E+K ++EVL E T + ++ W ++YY I + L + + ++ Sbjct: 62 GEIKPILEVLPEELWLTPELVEMVKWISEYYLCSITEALTLIS----FPEKIYQDVEVFC 117 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 E + KR + ++ L+ L + ++ L K+G+ + Sbjct: 118 TVVDETKLKEKIKKSKRLQNDEMVISLLKDK-------RGLVRTTSTIKKLVKQGILQIR 170 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + L Q I LL G+TGSGKTE+YL + Sbjct: 171 EKPLPNLP----------PIELTESQKQVYQQIKRDMPKNFVGLLHGITGSGKTEIYLKL 220 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 + L GKQ L ++PEIG+T Q +AR ++ F V HS L+ E+ + W + K G Sbjct: 221 AGDFLNHGKQVLFLLPEIGITTQMVARVKKYFPENTLVYHSRLSAREKFTVWRELKKGSP 280 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +V+GTRSA F PF+NLG+I++DEEH+ SYKQ+E +YH R++ +RA IP++LG+A Sbjct: 281 VLVLGTRSAAFLPFQNLGLIILDEEHELSYKQEETPKYHVREVVYWRAKRLGIPLLLGTA 340 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQH 414 TP++ET V + L +R N ++D+ + + ++ L ++ + Sbjct: 341 TPSMETYAAVISGLIKYYFLGKRYQNRPYPQVIIVDMFKEAKEGNTGIISSVLQKKISER 400 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 LQ QV LFLNRRGFAP ++C CG+ CP CD T H+ + + +CH+C + R Sbjct: 401 LQKGEQVFLFLNRRGFAPMIMCRKCGYFYRCPDCDVSMTYHKEEKNFQCHYCGKKIAFTR 460 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 +CP+C L G GT+++E+ L LFP I R+D DT K + ++ L + A Sbjct: 461 KCPACQEISLDLYGYGTQRVEEELKKLFP-AKIFRVDYDTMRSKNSYDKILEAIKNKEAD 519 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 I+IGTQMLAKG FPD+TLV +L+ D +L DFR+ ER L TQVAGRAGR GEV Sbjct: 520 IIIGTQMLAKGFDFPDLTLVGVLNADQSLNLPDFRAGERSFNLLTQVAGRAGRGLVPGEV 579 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT +PE+ ++Q + + +A + L+ R+ PP++ + + Q Sbjct: 580 IIQTFNPENYIIQAVQRGNFQQYALKELSLRKQTGYPPFSKIFRLIIAGEDEQKVIEGAN 639 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 L NL+ ++ ++ ++GP A K +R+ ILL+ + ++ L Sbjct: 640 NLVNLLKNASKFSPEIEIIGPAAAPFYKLKRNFRYHILLKTNKSSFAREVLKAGLQEFKK 699 Query: 715 IPDSRKVKWVLDVDPI 730 + K+ VLD+ P Sbjct: 700 SSLNHKLTLVLDLSPQ 715 >UniRef50_A0LE29 Replication restart DNA helicase PriA n=1 Tax=Magnetococcus sp. MC-1 RepID=A0LE29_MAGSM Length = 738 Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 275/739 (37%), Positives = 393/739 (53%), Gaps = 18/739 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A VAL +F Y +P + G V VP G R G+V + S + EL Sbjct: 2 YALVALTGARDASFSYKIPAELADGCHPGYLVLVPVG-NSLRTGVVWACSATPQWCEGEL 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + EVL E + + +LL W YYH P G V+ ALP LR R Sbjct: 61 KEIEEVLSDESLLDDELRQLLNWMIRYYHQPAGAVITAALPGHLRYDRKQRIRWNPAADP 120 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 T Q + Q+++ + L L+ + Sbjct: 121 TTLAQQPAALQAIATALQKRSNGLTEETLARNHGRRGLSRRLKQLEMAGYILTEQSWNAR 180 Query: 181 PEFSDWRTNYAVS--GERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLS 236 ++ + LN +Q AVG + +A + F+A+LL GVTGSGKTEVY Sbjct: 181 HTATEAAESPTSRVMQAAPPLNEQQQQAVGQLVAALEAQHFAAFLLDGVTGSGKTEVYFR 240 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 +E+ LAQG+QAL++VPEI LTPQ I R+ RF+ + V HS ++ + R W +AK+G Sbjct: 241 GVEHCLAQGRQALLLVPEIALTPQLIQRYEARFHENLAVFHSEMSAARRYRDWQRAKSGA 300 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A +VIG RSALF PF LG+IV+DEEH+ SYKQ+EG Y+ARD+AV RA Q ++LGS Sbjct: 301 ARVVIGARSALFAPFAKLGLIVVDEEHEGSYKQEEGVPYNARDMAVVRARMNQAVLVLGS 360 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGL------APALITR 410 ATP++E+L N QQ +Y L LT+RA V++L +K GL + L Sbjct: 361 ATPSMESLYNAQQGRYHHLHLTQRATGVALPPVQVINLADKKNLQGLPFGTLLSHPLRQA 420 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 M+Q QA Q +LFLNRRGFAPA+LC+ CG CP C TLH+ L CH+CD + Sbjct: 421 MQQVWQAGKQSLLFLNRRGFAPAILCNLCGITVSCPNCSVALTLHKGAAKLVCHYCDHVQ 480 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 VP CP+C L+ G GTE+L+ + FP ++R+DRD ++ GA+E+ L + H Sbjct: 481 GVPDLCPNCKQLGLIQFGPGTERLQLEVESCFPEARVARLDRDAVAQSGAMERILKQFHE 540 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 G IL+GTQM+AKGHHFP +TLV ++ + L DFR+AER QL TQVAGRAGR + Sbjct: 541 GQIDILVGTQMVAKGHHFPRLTLVGVVLAETTLSMPDFRAAERTFQLITQVAGRAGREAE 600 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 G+V +Q+ P H +Q + D FA+ R+++ PP+ ++R N Q Sbjct: 601 VGQVYVQSFDPAHYAIQAAMAHDADRFADAEFGFRQLVGYPPFKRMAVLRFSTPNVQEGG 660 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 F+ +LR L+ P + VLGP PA K R+RWQ++++ + + +++ L Sbjct: 661 HFIHELRRLVPDQP----GVVVLGPAPAPLFKLRNRFRWQLMIKAETVQGVHAMVSQLLQ 716 Query: 711 LINTIPDSRKVKWVLDVDP 729 + + RK++ +D+DP Sbjct: 717 IAQPMAG-RKIRVDVDIDP 734 >UniRef50_UPI0000E87B64 probable priA; primosomal protein N'''' (replication factor Y) n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B64 Length = 727 Score = 731 bits (1887), Expect = 0.0, Method: Composition-based stats. Identities = 289/736 (39%), Positives = 422/736 (57%), Gaps = 21/736 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 + VAL VPL R FDYL G K G V+V FG + +G+V ++ S L ++LK Sbjct: 6 KILKVALDVPLDRLFDYL-NNGEAFKVGQYVKVSFGSR-VLMGVVCGFANDSLLAEDKLK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 ++ + E +F + + RLL ++ADYYHHPIG + +P ++Q + + AT Sbjct: 64 KIIHA-EPEVIFDNDLLRLLEFSADYYHHPIGQTILSIVPSRIKQHKYQLRIKEKVYKAT 122 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + + L + K + LAA G+ R + + + KK + DL Sbjct: 123 RELTPDWIELLPKRQKNLRKLAAHLLGQPIRQS------SLKNIASNAKKAILDLEIMGV 176 Query: 182 EFSD--WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 +S+ R LN EQ A+ ++ + F A LL GVTGSGKTEVYL ++ Sbjct: 177 CYSEEWVEDESHKIDMRPSLNEEQQLAINSVMNEKG-FLASLLYGVTGSGKTEVYLHLIA 235 Query: 240 NVLAQGK-QALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEA 297 N L + K Q LV+VPEI LTPQ +RFR RF + VLHS L+ ERL W +AK+G+A Sbjct: 236 NFLEEEKAQILVLVPEINLTPQLESRFRARFPDRNLVVLHSNLSSIERLDNWRQAKSGKA 295 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 +I+IGTR A+FTPFKNL +I++DEEHDSS+KQQEG +YHARD+A+ RA + IPI+LG+A Sbjct: 296 SIIIGTRLAVFTPFKNLKLIIVDEEHDSSFKQQEGLKYHARDVAMVRARNNNIPIVLGTA 355 Query: 358 TPALETLCNVQQ--KKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQH 414 TP+LE+ N + KY+LLRL RA NA L K Q ++P ++ ++Q Sbjct: 356 TPSLESWLNASKEISKYQLLRLKDRAVLNASLPAIKTTPLNSDKDQ-LISPLILKAIKQR 414 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 + Q ++F+NRRG++P L+C CGW A C +C +H +RCHHC + P+ Sbjct: 415 VALKQQALIFINRRGYSPVLVCSSCGWSASCHQCSARLVVHLKDKKMRCHHCSYESPIAM 474 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 QC CG+ L P+G GT+++E + L P I R+DRD+ +K AL + + RG Sbjct: 475 QCQDCGNPDLYPLGSGTQKIEDRIRALIPSASILRVDRDSMRKKNALNELYEKTSRGDID 534 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQMLAKGH FP +TLV +LD D AL+S DFR++ER QV+GR+GR+ GEV Sbjct: 535 ILVGTQMLAKGHDFPKLTLVVVLDADNALYSTDFRASERLFSQLMQVSGRSGRSSIAGEV 594 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT P HP+ Q + Y+ FA LAER + LPP++ +++AE A F+ Sbjct: 595 LIQTSFPNHPIFQAVKTHNYELFANSILAERASIDLPPFSFQAVLQAESRTLSLAERFMD 654 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + + ++S EK+ + GPV + + G R I +Q R LQ+++ + I Sbjct: 655 DIADWAINS---KEKVNIFGPVRPVMERVSGHERINIYIQSNERKHLQNMLKVWIDQIRQ 711 Query: 715 IPDSRKVKWVLDVDPI 730 P + +VKW +D+DP+ Sbjct: 712 HPLANRVKWSVDIDPM 727 >UniRef50_B9Y7F6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y7F6_9FIRM Length = 722 Score = 730 bits (1885), Expect = 0.0, Method: Composition-based stats. Identities = 241/741 (32%), Positives = 366/741 (49%), Gaps = 33/741 (4%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD------ 51 M +A V + P L + F Y + + G RV V F +Q +G V +V++ Sbjct: 1 MRIAKVWIEHPVLQLDQVFSYDA-LQLPAEKGKRVSVDFNGRQI-VGFVDAVTEVDDGQP 58 Query: 52 ASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 +++ LK ++ VLD + T ++ L W A+ P+ LP L+ Sbjct: 59 ETQVNGRPLKPLLSVLDENALITPELFELAKWMAEDTLSPVISCFQAMLPSKLKPKSSNQ 118 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 M + +P+Q++ L A + + + + A + L K Sbjct: 119 KIKMEQIAVYVGEHPL------LTPRQKEVL-AWLRTEGPTVLAKWRKQSPAITRTLEKL 171 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G L S T + + + + A + L LN +Q V I ++ LL GVTGSGKT Sbjct: 172 GCVRLDSRTVKAREEQADQAEAF--LPLNADQKRVVQEIQTSTQ--DVILLHGVTGSGKT 227 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL + VL G+Q L++VPEI LTPQ +AR + RF V + HS LN+ ++ + + Sbjct: 228 EVYLHLARQVLDAGQQVLILVPEISLTPQMVARVKGRFQNDVAIYHSALNNQQKYEQYCR 287 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 +A+IV+GTRSA+F PF +LG+I++DEEHDSSYKQ +YH RD+A++RA Sbjct: 288 VFEKQASIVVGTRSAVFMPFDHLGLIILDEEHDSSYKQDSLPQYHCRDIAIHRARHFGCK 347 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ--KVQAGLAPALIT 409 +ILGSATP+LE+ + Y L L R N + + V+D+K Q L+ L Sbjct: 348 VILGSATPSLESYARALKGVYGLAELKERV-NRQLPVCTVVDMKNQNRAQSGILSDVLRQ 406 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ ++ Q IL LNRRG++P + C CG +CP CD + H++ ++CH C S+ Sbjct: 407 KIADRIKRGEQAILLLNRRGYSPLIKCGQCGETLQCPHCDVALSYHKSIQKMKCHLCGSE 466 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 P+ CP CGS G GT++LE+ + LFP + R+D DTTSRK A ++ L + Sbjct: 467 FPLVTVCPKCGSRTFAAPGYGTQKLEEEVTRLFPQARVLRMDADTTSRKEAHQKLLEQFG 526 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 R A IL+GTQM+AKG FP VTLV +L+ D DFRS E L Q AGR+GR+ Sbjct: 527 RHEADILVGTQMIAKGLDFPQVTLVGILNADAGTARPDFRSVEMTFDLIMQAAGRSGRSQ 586 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 GEVV+Q P H + + Y +F Q + R + PP+T + + D Sbjct: 587 TPGEVVIQAFDPNHFAVVAGSRQDYQSFFYQEMQYRHLGGYPPYTYLIALTFSDVRPDRP 646 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 Q + + S L VLGP K R+R +++L+ +++ + L Sbjct: 647 KQSAQVVAQALRQSSL----FKVLGPSD--LFKLQDRYRSRLVLKGKDLDQMKTALAQVL 700 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 +DV+P+ Sbjct: 701 QEYRRQRSQAH--LSIDVNPL 719 >UniRef50_C0A9F7 Primosomal protein N' n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9F7_9BACT Length = 769 Score = 729 bits (1882), Expect = 0.0, Method: Composition-based stats. Identities = 258/772 (33%), Positives = 370/772 (47%), Gaps = 46/772 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDAS----- 53 M V + Y PE + + G VRVP R+GIV + + Sbjct: 1 MMTVGVHPLAGFDKLLHYRAPESLREQAQVGMLVRVPILNG-LRLGIVGEMLEIGEGGGG 59 Query: 54 -ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 + P+ +LK + + P + +L W A YY P+ ++ LP +R Sbjct: 60 LDFPVEKLKTLSAFVYPFPALPPDLLQLARWMAGYYAAPLDGIIETMLPAAVRHAAGLKY 119 Query: 113 APMWYWFATEQGQ-------------AVDLNSLKRSPKQQQALAALRQGKIWRDQ---VA 156 A R+P Q + LR + + ++ Sbjct: 120 EKYLSLAAPPSPPPPPPATSAAPLDAEEFARLEHRAPAQAKLYRFLRDQFRPQKKSLVLS 179 Query: 157 TLEFNDAALQALRKKGLCDLASETPEF----SDWRTNYAVSGERLRLNTEQATAVGAIHS 212 L AA AL K+GL + E DW T +V+ LN EQ TA A+ + Sbjct: 180 RLGITAAACNALVKRGLIREETRRVERVAYADDWATGESVAALPHNLNDEQQTAADALRA 239 Query: 213 AA--DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF- 269 + F LL GVTGSGKTEVYL + + LA G + +VPE+ LTPQT+AR R R Sbjct: 240 SLAARQFGVTLLHGVTGSGKTEVYLRAVHDALADGGGVVFLVPEVALTPQTVARLRGRLE 299 Query: 270 ----NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 V V HS L+D ER+ WL GEA +V+G RSA+F P +NL +IV+DEEH+ Sbjct: 300 AIAPGHNVVVWHSHLSDGERMDGWLALATGEARVVVGARSAIFAPVRNLRLIVVDEEHEP 359 Query: 326 SYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR 385 +YKQ E RYH RD+AV RA +LGSATP+LET N + KY LLRLT+R + Sbjct: 360 AYKQDETPRYHGRDVAVMRAKLAGAHCLLGSATPSLETHANAKAGKYSLLRLTKRIDTRQ 419 Query: 386 PAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 ++DL+ + +Q L+ L+ M+ + Q ILFLNRRG++ A+ C CG Sbjct: 420 LPHIEIVDLRIEAMQNRGFTTLSKKLVNAMQARFERREQTILFLNRRGYSSAMQCRKCGH 479 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS--CGSTHLVPVGLGTEQLEQTLA 499 + ECP C T H++ LRCH C Q+ P CP+ C + + G+GT+++E+ + Sbjct: 480 VEECPHCSVSLTYHRSDETLRCHLCGYQKTAPLVCPNATCRAPDIRWRGMGTQRVEEAVR 539 Query: 500 PLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDV 559 + P I R+D DT +K Q L+E G +L+GTQM+ KG FP+VTLV L+D Sbjct: 540 RVLPHARIERMDADTMQKKNRFRQLLSEFRAGKIDLLVGTQMIGKGLDFPNVTLVGLVDA 599 Query: 560 DGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAE 619 D ++ DFR+ ER QL QVAGRAGR + GEV++QT P+ +Q + YD FAE Sbjct: 600 DISMHIPDFRANERTFQLLVQVAGRAGRGDRAGEVIVQTFTPQAEAIQFSRHADYDGFAE 659 Query: 620 QALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPAL 679 L R PP + N + F +Q L+ A + + GP P Sbjct: 660 AELKMRNAFGYPPARHLIHHLFRGPNPEKLQFFSEQWAKLVEKELGAR--VELRGPSPCP 717 Query: 680 APKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 K +R+Q+ + + + I+ L T ++ V+DVDP+ Sbjct: 718 IEKIKDEYRYQLW--YFTNANVSAIVADLARLRATFAWPEQLVQVIDVDPVN 767 >UniRef50_D2LVR6 Primosomal protein N' n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LVR6_BACS4 Length = 809 Score = 728 bits (1880), Expect = 0.0, Method: Composition-based stats. Identities = 210/642 (32%), Positives = 347/642 (54%), Gaps = 10/642 (1%) Query: 96 LFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK---IWR 152 L + P++ + + + ++ + + KQ++ + Sbjct: 166 LLYIKPVVSSKETKKLRTVVKPNMTITELHSICESLPNNAKKQKELVQYFINHFETVTVV 225 Query: 153 DQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 D + + + + + L +K + ++ L L +Q A+ I + Sbjct: 226 DLIEKVPTSRSTISTLVEKEILIKEEVEMRRDPFKGREYKRTSALPLTEQQTVALSPIIN 285 Query: 213 AAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN 270 + +LL GVTGSGKTEVYL ++ L GK+A+++VPEI LTPQ + F++RF Sbjct: 286 TLENNKHETFLLRGVTGSGKTEVYLQAIDKALKLGKEAIMLVPEISLTPQMVTHFKQRFG 345 Query: 271 APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 + V VLHS L+ E+ W + ++ + + +G RSA+F PF+NLG+I+IDEEH++SYKQ+ Sbjct: 346 SEVAVLHSALSKGEKYDEWRRIRDKKVKVAVGARSAIFAPFENLGIIIIDEEHETSYKQE 405 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQH 390 E RYHARD+A+ R P+ILGSATP+LE+ ++ Y LL +T R N + + Sbjct: 406 EAPRYHARDVAIKRGEHYSCPVILGSATPSLESYARAKKSVYHLLTMTTRVNNVQMPSVN 465 Query: 391 VLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 ++D++ + + LI M ++ Q++LFLNRRG++ +LC DCG++AECP Sbjct: 466 IIDMREELRSGNRSMFSEPLIEAMINRIEKQEQIVLFLNRRGYSTFILCRDCGYVAECPH 525 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T H+ L+CH+C P CPSC + G GT+++E+ L + GV + Sbjct: 526 CDISLTYHRTNQTLQCHYCGHVETPPNVCPSCEGDSIRFFGSGTQKVEEELNKVLSGVRV 585 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+D DTT RKG+ E+ L + RG A +L+GTQM+AKG FP++TLV +L D L D Sbjct: 586 IRMDVDTTRRKGSHEELLNKFGRGEADVLLGTQMIAKGLDFPNITLVGVLAADSMLHIPD 645 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FRSAER QL TQV+GRAGR K+GEV++Q++ P+H +Q + + +F E+ + R+ Sbjct: 646 FRSAERTFQLLTQVSGRAGRHQKKGEVLIQSYTPDHYSIQDVKQHDFVSFFEKEMKIRKQ 705 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 PP+ +++ D + + +++ I SS D V GPV + P+ R+ Sbjct: 706 AGHPPYYYLILIHVSDTDLGNTVSVAEKISKFIKSSVSPDTY--VYGPVTSAIPRIKDRY 763 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 R+Q ++++ + ++ L + + + ++D +P Sbjct: 764 RYQCMIKYKVEPNITVVLQEVLKTYQSEMNKSDLSIMIDTNP 805 >UniRef50_C4G2R7 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC 49176 RepID=C4G2R7_ABIDE Length = 741 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 238/741 (32%), Positives = 367/741 (49%), Gaps = 17/741 (2%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVK---AGCRVRVPFG-KQQERIGIVVSVSDASEL 55 A V + + L +TF Y +PE + G V VPFG +E VV + + +E+ Sbjct: 2 YAEVVIGISVDKLDKTFCYRVPEHLGDAENLIGAEVIVPFGMGNRETKAYVVEIKEDTEV 61 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 + +K ++ ++ + L W + Y + + L L + A Sbjct: 62 DKHLIKDILMKSENSVNIETKLIELACWLKNNYGGSMNEALRSVLQAPKKVNHIKARTVS 121 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL-QALRKKGLC 174 E + + K+ + + LA +G+ + E + A+ ++L K G+ Sbjct: 122 LLTDRDEAAEKLKEFERKKYSLKTKILAKAIEGEFSYENFIKNEKSAASAFKSLVKDGII 181 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTE 232 ++ E + + +G+ L EQ AV + + + +LL G+TGSGKTE Sbjct: 182 EIKEELLYRKPVKISDKNTGKA-ELGEEQKRAVDKVVNDYKSGIMGRYLLFGITGSGKTE 240 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 VY+ ++E V+ G+Q + ++PEI L+ Q + R RF + V++S ++ ER +L+A Sbjct: 241 VYMEIMEEVIRSGRQVIFLIPEIALSFQMVERLSARFGERISVMNSKMSQGERYDQYLRA 300 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 KNG+ I++G RSALFTPF NLG+I++DEEH+ SYK + RYHAR+ A+YRA E + Sbjct: 301 KNGDIDIIVGPRSALFTPFSNLGLIIVDEEHEGSYKSSKTPRYHARETALYRAGKENAAV 360 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALIT 409 ILGSATP+LE + KK +L LT R A V+DL+ + ++ L Sbjct: 361 ILGSATPSLEAVKLASDKKIEVLMLTERPAGALLPEIEVVDLREELRAGNKSIISKKLSE 420 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 ++ L Q ILF+NRRG+A + C CG +CP CD T H+ L CH+C + Sbjct: 421 LIKDRLAKKEQTILFINRRGYAGFVSCRSCGEAVKCPHCDVSLTFHRPD-RLICHYCGYE 479 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 +P +CP C S ++ GLGTE++E+ + FP + R+D DTT+ K E + + Sbjct: 480 EKMPDKCPKCESPYISTFGLGTEKVEEIVKNDFPVARVLRMDGDTTTGKYGHEAIIEKFK 539 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 +G A ILIGTQM+ KGH F VTLV +L D +LF DFR+AE +L Q AGRAGR Sbjct: 540 KGEADILIGTQMIVKGHDFEKVTLVGILAADLSLFLGDFRAAETTYELLVQAAGRAGRGR 599 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 +GEVV+QT+ PEH +Q+ Y F + + R++ + PP + + + Sbjct: 600 YRGEVVIQTYKPEHYAIQSAATGNYKEFYTKEIHYRKLGEYPPEKHLLGIILYSVKPEEV 659 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTL 709 + L + E++ V GPV A PK +R I L+ R L N Sbjct: 660 TRAGEVLAGYLK--GEKSEEVTVNGPVWAAIPKIRDIYRKIIYLKSSVRNELVRAKNQVE 717 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 P KV D +P Sbjct: 718 IYTKENPHFNKVSVQFDFEPQ 738 >UniRef50_Q5P4Q5 Primosomal protein N' (Replication factor Y) n=6 Tax=Betaproteobacteria RepID=Q5P4Q5_AZOSE Length = 723 Score = 727 bits (1877), Expect = 0.0, Method: Composition-based stats. Identities = 289/732 (39%), Positives = 400/732 (54%), Gaps = 11/732 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + V+LPVPLP+ FDY + G VRVPFG+ E+ G++V+++D S + L Sbjct: 1 MRIVRVSLPVPLPQLFDYTSEDATEGDVGRCVRVPFGRG-EKSGVIVAIADDSAIEAARL 59 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 KAV V L+ + A YYH P+G+V+ ALP LR+ ++ Sbjct: 60 KAVRHVQREVAPLPRDWLELVAFVARYYHAPLGEVIALALPPGLRRADAVSDREADPLLD 119 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 L +R + L L + R V + AL ++G T Sbjct: 120 VGDAGRAALAVPRRPSRALALLRDLVALGVVRHSVVRALPSGDALADALRRGWIVPVRRT 179 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 +GE +L EQ A+ A+ +A F WLL GVTGSGKTEVYL + Sbjct: 180 NPAD-------AAGELPQLTAEQGAAIDAVLAAGPGFVPWLLQGVTGSGKTEVYLRLAAR 232 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L G+Q L++VPEI LTPQ AR RF A V LHSGL R +++A G A I Sbjct: 233 TLEAGRQVLMLVPEIALTPQLEARVAGRFPSATVISLHSGLAPGARSRGFVQALEGRADI 292 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+GTR A+F LG+I++DEEHD+SYKQQEG RY ARD+AV+RA +PI+LGSATP Sbjct: 293 VLGTRLAVFAALPRLGLILVDEEHDASYKQQEGVRYSARDVAVWRARQRDVPIVLGSATP 352 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 +LE+ +V+ +YR LRL+ RA + +D + ++ GL+PAL + + L+ Sbjct: 353 SLESWQHVRVGRYRGLRLSVRAVASTLPAVRRIDTRRARLDEGLSPALQAAIGERLERGE 412 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q ++F+NRRG+AP L C C W++ CP C +H A LRCHHC +PR CP C Sbjct: 413 QSLVFINRRGYAPVLSCPSCSWVSPCPHCSANLVVHLADRRLRCHHCGCDSAIPRVCPVC 472 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 G+ + P G GT+++E L LFP + R+DRD+ + E LA + G A IL+GT Sbjct: 473 GNQDIQPFGRGTQRIEARLVELFPDARVLRVDRDSARTRKQWEAMLATIAAGEADILVGT 532 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM+AKGH FP +TLV ++ D +L +ADFR+ ER Q QV GRAGRA GEV++QT Sbjct: 533 QMMAKGHDFPRLTLVGVVGADASLHAADFRAPERLFQQLMQVGGRAGRAHLPGEVLIQTE 592 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 +PEHPL + L+ +DAFA +AL ERR PP+T ++RA+ A FL R L Sbjct: 593 YPEHPLYRCLVRHDFDAFAARALDERRQAGFPPFTHQAMLRADAPALDDAMKFLAHARRL 652 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 S A E L V VP + R R Q+L++ R LQ + + ++ R Sbjct: 653 AQDS--APEGLQVFDVVPMRMTRLARRERAQLLVEAGERALLQEFVGRWICVLRAQRLPR 710 Query: 720 KVKWVLDVDPIE 731 ++W LDVDP+E Sbjct: 711 DLRWQLDVDPLE 722 >UniRef50_A5KNV0 Putative uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KNV0_9FIRM Length = 706 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 226/710 (31%), Positives = 369/710 (51%), Gaps = 13/710 (1%) Query: 30 CRVRVPFGKQQERI-GIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYY 88 V VPFGK + G V ++S + ++++K + ++ S + L W Y Sbjct: 1 MAVVVPFGKGNRKTKGYVTALSKTCDYDISKVKEIADISRSGVEIEAKLIALAAWMKSNY 60 Query: 89 HHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG 148 + L LPI ++ + E G+ L+++ K + L A Sbjct: 61 GGTMLQSLKTVLPIKEKEN-IKVKKRLRLLIDRETGEKQLHYYLEKNQKARARLMAALLD 119 Query: 149 KIWRDQ---VATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQAT 205 D L ++AL ++ + + SE + + + + EQ Sbjct: 120 DPLLDYELVRKKLNITATVIRALEEQHVLAVESEQVYRNPVHAEN-IQKKEIIYTQEQKR 178 Query: 206 AVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIA 263 A+ + +LL GVTGSGKTEVY+ ++++V+ +GKQA+V++PEI LT QT+ Sbjct: 179 AIMRFCKDYENGIRKTYLLHGVTGSGKTEVYMEMIQSVVDKGKQAIVLIPEIALTYQTVM 238 Query: 264 RFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 RF RF V V++S L+ ER ++AK GE ++IG RSALFTPF NLG+IVIDEEH Sbjct: 239 RFYRRFKDRVSVMNSRLSAGERYDQMMRAKAGEVDVMIGPRSALFTPFPNLGLIVIDEEH 298 Query: 324 DSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN 383 + +YK ++ RYHAR+ A+ RA +E ++LGSATP++E + + +Y L+ + R+ Sbjct: 299 EPTYKSEQTPRYHARETALRRAQTEGASVVLGSATPSMEAMYRAKNGEYVLMEMKNRSKM 358 Query: 384 ARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 PA + +D++ + L+ L M++ L+ Q +LFLNRRG++ + C +CG Sbjct: 359 QDPAEVYTVDMRKELKNGNRSILSEQLQRLMKERLEKKEQTMLFLNRRGYSGFVSCRECG 418 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 + +CP CD ++H+ +RCH+C ++ + CP CGS H+ GT+Q+E+ + Sbjct: 419 HVIKCPHCDVSLSVHR-DGKMRCHYCGYEQTHVKICPECGSDHIGEFRAGTQQIEEIVKT 477 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 +FP + R+D DTT +K + E+ L+ A +L+GTQM+ KGH FP+VTLV +L D Sbjct: 478 VFPQARVLRMDMDTTRQKDSHEKILSAFANEEADVLVGTQMIVKGHDFPNVTLVGILAAD 537 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 +L++ D+RS ER QL TQ GRAGR K+GE V+QT+ P+H + T + Y+AF E+ Sbjct: 538 MSLYTDDYRSGERTFQLLTQAVGRAGRGDKKGEAVIQTYSPDHYAIATSAAQDYEAFYEE 597 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALA 680 + R MM PP + + V + + L+ ++ + D + V+GP Sbjct: 598 EIRYRTMMGYPPAENLLAVFISSADEALLETGCRYLKEYMIKAK-KDIEASVIGPASPGI 656 Query: 681 PKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 K +R I ++ L + + T I K++ D +P+ Sbjct: 657 EKINDVYRKVIYVKTADYHDLVVLKDRTEKYIEINSGFDKMRIQFDFNPM 706 >UniRef50_A4A8L5 Primosomal protein N` n=2 Tax=unclassified Gammaproteobacteria RepID=A4A8L5_9GAMM Length = 730 Score = 724 bits (1869), Expect = 0.0, Method: Composition-based stats. Identities = 307/733 (41%), Positives = 445/733 (60%), Gaps = 17/733 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V VA PVPL R FDYL PE ++ G R+RVPFGK+ E I++ V+ + + + Sbjct: 9 VLRVAAPVPLRRPFDYLAPESQNPDRLRPGIRLRVPFGKR-EITAILLEVAAEASVNAEQ 67 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 L+ ++VLD +P+ T + L W++DYY HP+G+V A+P LR+GR + W Sbjct: 68 LRPALDVLDDKPLLTPGIMALCKWSSDYYQHPVGEVFSAAIPKALREGRGLSETH---WR 124 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T +G+ + +L R+ Q +ALA L+ G+ + + + A L+ L KGL + Sbjct: 125 LTTEGKGLPEGALSRAKSQAKALALLQTGEQLPEVLKNAGISGAVLRELTAKGLVE---- 180 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 + + A+ L+ EQ +AV A+ D+FS LL GVTGSGKTEVYL ++ Sbjct: 181 RCRITTSLPSAALKENGPPLSEEQGSAVAAVE--WDSFSCHLLQGVTGSGKTEVYLRLIA 238 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L +G+QALV++PEIGLTPQT+ RF RF +PV VLHSGL+D +R +AW A++G A I Sbjct: 239 ACLDRGEQALVLIPEIGLTPQTVKRFEARFQSPVAVLHSGLSDGQRFAAWQAAQSGTAGI 298 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+GTRSA+FTP G+I++DEEHD SYKQQ+G+RY ARD+AV RA E P++LGSATP Sbjct: 299 VMGTRSAIFTPLARPGLIIVDEEHDGSYKQQDGFRYAARDVAVKRAQLEGCPVMLGSATP 358 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA-D 418 +LE+L N ++++YR L R G + +DL+G ++ AG++ L+ +R+ ++A Sbjct: 359 SLESLENARRERYRHHFLRGRQGGGELPMLQTVDLRGLQLNAGISDYLMAAIRETVEAQK 418 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q +LFLNRRGFAP L CH CGW+A C CD T+H + LRCHHC +QR +P QCP Sbjct: 419 RQALLFLNRRGFAPTLQCHSCGWVAGCDHCDARLTVHLRKRCLRCHHCAAQRALPAQCPD 478 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG T L+ GLGTEQ E+ L + P+ R+D D A++ L H +++G Sbjct: 479 CGGTALLTHGLGTEQTEEFLRNVL-SCPVHRVDSDAMRGVDAMQSLLEVAHSEEPCVILG 537 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQML KGHHFP V LV ++D D L+SADFR ER AQL QVAGRAGR G+V++QT Sbjct: 538 TQMLTKGHHFPAVQLVGVIDADALLYSADFRGEERMAQLVVQVAGRAGRESAGGKVLIQT 597 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 H+P+ PL + L + +++ L +RR LPP+ +++R++ N + FL+ ++ Sbjct: 598 HYPDDPLFEALRHGHFESITRSLLDKRRASGLPPYGQLMLLRSDARNERDGEAFLRAVQK 657 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 + D +L +GP+P+ P+R GR+RWQ+ SR + + S Sbjct: 658 EVTGFLPPDCQL--IGPLPSAMPRRAGRFRWQLWCLSASRGSAMAAARLLVERAEGLRKS 715 Query: 719 RKVKWVLDVDPIE 731 R++ W +DVDP + Sbjct: 716 RELSWFIDVDPSD 728 >UniRef50_C6NRF0 Primosomal protein N' n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NRF0_9GAMM Length = 724 Score = 723 bits (1867), Expect = 0.0, Method: Composition-based stats. Identities = 326/729 (44%), Positives = 418/729 (57%), Gaps = 22/729 (3%) Query: 4 AHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAV 63 VA+ PL +TF Y G RVRVPFG+ RIGIVV E LK + Sbjct: 16 LEVAVFAPLRQTFSYRCKTP-PPPTGTRVRVPFGRGH-RIGIVVGYG--LEPAGTTLKDI 71 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +LD EP+ T ++ LL + A YY HP+G+V ALP LL +GRP + + E Sbjct: 72 DAILDDEPLLTPALQSLLHFGASYYQHPLGEVWATALPALLCRGRPLTSGEAPRYACNEP 131 Query: 124 GQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEF 183 + P+Q L LR+ Q A L +L +G Sbjct: 132 SPDAA---TRLGPRQTALLQLLREAGPLGRQELPAALRPA-LPSLLARGWLRAEDAPAPV 187 Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLA 243 D +++ L+ EQ AV A+ +A D FS +LL GVTGSGKTEVYL + L Sbjct: 188 LDLQSS------PHALHPEQRDAVTALRAARD-FSVFLLDGVTGSGKTEVYLETARSHLE 240 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPV-EVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 G+Q L +VPEIGLTPQ + R R RF + V HSG ++++RL W A++G +++G Sbjct: 241 AGQQVLFLVPEIGLTPQLLERCRARFGSAVVASYHSGQSEAQRLRVWQGARSGRIRLIVG 300 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSALF P +IV+DEEHD S+KQQ GW Y ARDLA+ RA E IPI+LGSATP+LE Sbjct: 301 TRSALFLPLARPALIVVDEEHDPSFKQQSGWLYSARDLAIRRAQLESIPIVLGSATPSLE 360 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 +L N KYR LRL +RA +L ++ + +QAGL+ L+ Q L+A +QV+ Sbjct: 361 SLHNAHIGKYRHLRLRQRATAMNLPPMTILPMRRRLLQAGLSVDLLQACTQTLEAGHQVL 420 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LFLNRRG+APALLCHDCG CPRC T H+ LRCHHC + P QCP C S Sbjct: 421 LFLNRRGYAPALLCHDCGSALFCPRCSAPMTWHRQAGRLRCHHCGHEEGHPHQCPQCASV 480 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L PVG GTEQLE L FPGVP+ RIDRD ++ G LE LA+VH G ILIGTQML Sbjct: 481 DLRPVGAGTEQLEDYLGQRFPGVPVLRIDRDCITQTGQLEAVLAQVHHSGPAILIGTQML 540 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGHHFP VTLV +++VD +LFSADFR+ ER AQ QVAGRAGR G +LQ+H PE Sbjct: 541 AKGHHFPRVTLVGIVNVDQSLFSADFRATERLAQTVLQVAGRAGRGSVPGRALLQSHVPE 600 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPLL L Y A A+ L ERR+ +LPP+ + ++RAE H FL S Sbjct: 601 HPLLALLQAGDYTAIAQHLLEERRVARLPPFRALALLRAEAHRLDRVQSFLAAAAERAPS 660 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 L + GP P+L +R G R ++ L+ R LQ + L + T P+SR+V+ Sbjct: 661 ------GLEISGPFPSLLERRAGFHRAELWLEAARRSELQRALKHWLPQLGTRPESRRVR 714 Query: 723 WVLDVDPIE 731 WV+DVDP+ Sbjct: 715 WVVDVDPLN 723 >UniRef50_B6BVT9 Primosomal protein N' n=1 Tax=beta proteobacterium KB13 RepID=B6BVT9_9PROT Length = 725 Score = 723 bits (1866), Expect = 0.0, Method: Composition-based stats. Identities = 277/734 (37%), Positives = 408/734 (55%), Gaps = 20/734 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 + VA+ VP+ FDY E V G V VPFG ++ IGIVV V + LPLN++K Sbjct: 7 QIIKVAIDVPVDDLFDYRCSEQ--VDVGQFVVVPFGSRK-LIGIVVEVDVNTTLPLNKIK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 V+ V D E +F +++L + A YY +PIG + A+P ++QG + + A+ Sbjct: 64 EVIRV-DEESLFNTELFKLFRFVASYYQYPIGQTIHTAVPSRIKQGVTRGKKKNYIFNAS 122 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRD-QVATLEFNDAALQALRKKGLCDLASET 180 ++ ++ K +A + + ++ T+ ++ L L T Sbjct: 123 NNLSYEVIHGFPKNQKNLIKIATQLLTQPMNEIELKTVSNWKKHIEYLINHDLVTQVEIT 182 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PE L LN+EQ+ V I F A+L+ G+TGSGKTEVY+ ++++ Sbjct: 183 PEAPQHSA-------PLILNSEQSEIVEQIKKTKG-FEAFLIHGITGSGKTEVYMHLIDS 234 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAAI 299 ++ Q LVMVPEI LTPQ RF+ RF+ + LHS L+ +RL W AK+GEA I Sbjct: 235 LIKNEGQVLVMVPEINLTPQLEDRFQSRFHTKKIVSLHSHLSQPDRLENWRLAKSGEAQI 294 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 VIGTR ++FTPFKNL I++DEEHD S+KQQ+ RYHARD+ + RA IP I GSATP Sbjct: 295 VIGTRLSVFTPFKNLTAIMMDEEHDMSFKQQDNLRYHARDVGMMRAKLLNIPFIAGSATP 354 Query: 360 ALETLCNVQQKKYRLLRLTR-RAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 ++E +K L RA +A ++ Q + L+ L ++ L Sbjct: 355 SMEIWHRAVNEKKLKLLSLTKRANEDATLPRVDLIK-TSQDLDEPLSTYLKDAIQHRLDQ 413 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 QV++F+NRRGFAP L C CGW A+C RC +H+ + LRCHHCD QR + C Sbjct: 414 QQQVLIFINRRGFAPVLFCSSCGWQADCNRCSSKLVVHKNKQQLRCHHCDYQRTIDSSCQ 473 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG+ L+ +G GT+++E+ LA LFP I R+DRDT K L+Q A++H IL+ Sbjct: 474 ECGNVDLMTLGKGTQKIEEQLARLFPLARIKRVDRDTIKNKKDLDQLYADMHDQKLDILV 533 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQML+KGH FP +TLV +LD D AL+S+DFR+ ER QVAGR+GRA +GEVV++ Sbjct: 534 GTQMLSKGHDFPHLTLVGILDADHALYSSDFRAGERLFSQLVQVAGRSGRASIKGEVVIE 593 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T+ PEHPL + + + ++ FA++ L R+ + PP+ +++ E N ++ F+ Q Sbjct: 594 TNFPEHPLYKKIQSQDFNGFAKEELQLRKELHFPPFVMQAMLKTESKNKKYLEAFVTQCF 653 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 + + P K+ PV + G R I +Q +R L H ++ + I+ + Sbjct: 654 QFMSNLP---SKVTCFPPVRPYLERLQGFERSHIYMQSNNRTELNHFLSELRSFISAMKI 710 Query: 718 SRKVKWVLDVDPIE 731 S +VKWV+DVDP+E Sbjct: 711 SSRVKWVIDVDPVE 724 >UniRef50_UPI00016C01EC Primosomal protein N (replication factor Y) - superfamily II helicase n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C01EC Length = 745 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 232/744 (31%), Positives = 365/744 (49%), Gaps = 17/744 (2%) Query: 3 VAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGK-QQERIGIVVSVSDASELP- 56 + + + + F Y+LPE + G RV VPFG + IG ++++ ++ Sbjct: 2 FCSIIINRATNKAIDKPFTYILPEHLNALVGSRVMVPFGPLNKLTIGYLINIVSDEQITN 61 Query: 57 -LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 ++K V+EVLD EP+ ++ + +YY + LP + + A A Sbjct: 62 IDFKIKTVIEVLDEEPILNQEQLEMVKFLVEYYGSSYAAAISTLLPPIDKHDIKTAVATT 121 Query: 116 WYWFATEQGQAVDLNSLKRSP-----KQQQALAALRQGKIWRDQVATLEFNDAALQALRK 170 + + QA+ K S Q + L L Q ++ Sbjct: 122 EFLYKAADDQAILQYLNKISHSKTFANQAKILNFLLQNDGQIVSELKNTLELNTNSSINS 181 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 L + + L LN+EQ A I S +D + +LL GVTGSGK Sbjct: 182 LLKLKLIKRVFWQVRVQHMPICYDKFLPLNSEQQQAYDQISSCSD-HNTFLLEGVTGSGK 240 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEV+L ++ + + +G+ +V+VPEI LT QT+ RF ERF + V + HS L +R +L Sbjct: 241 TEVFLHLIRDAVERGESVIVLVPEIALTRQTVNRFTERFGSRVALTHSKLTPRKRREIYL 300 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +AK IVIG RSA+F P L +I+IDEEHD SYK +++A ++A+ R Q Sbjct: 301 QAKIQNVQIVIGPRSAVFMPLPRLSLIIIDEEHDGSYKSDMVPKFNAIEIAIERMKHHQG 360 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPAL 407 +IL SATP+LE+ Y L+L +RA NA ++D++ + L+ L Sbjct: 361 KLILASATPSLESYYQATLGIYEYLKLNQRAKNATMPTISIVDMREELAAGNTKILSRRL 420 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + + QV++ LNRRG + + C CG++A+C CD +T HQ L CHHC Sbjct: 421 HNAIVDTVTQGKQVMILLNRRGHSTFISCRSCGYVAKCAYCDQPFTYHQKNKLLICHHCL 480 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 +Q VP CP CGS ++ G GT+++E+ L F I+R+D DT S+K LE L + Sbjct: 481 NQIQVPTTCPECGSKYMQFFGNGTQKIEEYLMMHFSHYGIARMDLDTVSKKNELETLLQD 540 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 +G ++L+GTQM++KGH F +VTLV ++ D L+ DFR+AE+ QL TQ GR+GR Sbjct: 541 FEKGATKLLVGTQMISKGHDFSNVTLVGIISADSLLYIPDFRAAEKTYQLITQTLGRSGR 600 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 QG+V++QTH P++ +L + F + L R++M PP+ V + Q Sbjct: 601 GADQGKVIIQTHSPQNDVLINIQNGSQPQFYKSELITRKIMGYPPYNHLFSVMISSEDEQ 660 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 +++L + + +LGP A PK ++RW+I++ R L Sbjct: 661 SVIQNIKKLFAY-YTHYNKKKLFRLLGPTAATMPKLANKFRWKIMIIGQPRDILLFYGRY 719 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 + N +K+ + D+DP Sbjct: 720 CIDKFNEYEKPKKINIIWDIDPRN 743 >UniRef50_A8RCQ4 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RCQ4_9FIRM Length = 721 Score = 721 bits (1862), Expect = 0.0, Method: Composition-based stats. Identities = 252/740 (34%), Positives = 374/740 (50%), Gaps = 32/740 (4%) Query: 1 MPVAHVALP---VPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP- 56 M +AHV + + L RTF Y +G TV G RV VPFG + +G V V + S Sbjct: 1 MKLAHVFIEHSTMHLDRTFSYGC-DGFTVCRGMRVVVPFGA-KIIVGFVERVEEISAQEA 58 Query: 57 ---LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 E+K ++ VLD EP+ ++ L A Y P LP L+ A Sbjct: 59 AAYDFEIKRIIRVLDEEPLLNEELFELANMMAKRYIVPRIACFQCILPAKLKPRSTAKCR 118 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + W E+ A + KQQ L A+++ K + + + L G Sbjct: 119 KLETWVRYEKDIA------SLTKKQQVVLEAMKEAKEMLRTTYYQMY-KSVGKKLISLGC 171 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + E SG LN +Q AV A+ + LL GVTGSGKTEV Sbjct: 172 VTVFER--EAQAVLGCEEPSGPVFDLNAQQQHAVDAVLH--HSAMVTLLHGVTGSGKTEV 227 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 +L + + + + KQ L++VPEI LTPQ IAR ++RF A V + HS LN+ E+ + K Sbjct: 228 FLHLAKAMRERDKQVLILVPEISLTPQMIARVKQRFGAQVAIYHSALNEQEKYEQYQLVK 287 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 + IV+GTRSA+F PF +LG+IV+DEEHD+SYKQ G RYH RD+A+ RA Q ++ Sbjct: 288 KHQVDIVVGTRSAVFMPFDHLGLIVMDEEHDTSYKQDRGVRYHCRDIALQRAKIHQAKLV 347 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 L SATP+LE+ + Y+L+ + +R N + +++++ + ++ AL+ Sbjct: 348 LASATPSLESYARAHKGIYQLVEMPKRI-NEQFPQVKLVEMREAVKKKESYLMSNALLDA 406 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + LQ QVIL LNRRG+ P L C +CG++ CP C+ + H+ + L+CH CDS Sbjct: 407 IYTRLQRKEQVILLLNRRGYTPILRCMECGYVQMCPNCETAMSYHKEEGVLKCHICDSVM 466 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 PVP CPSC S +G+GT++LE+ + FP I R+D DTT +K A E L + + Sbjct: 467 PVPTHCPSCHSAAWRYMGMGTQKLEEFIQIKFPQAKIIRMDADTTHKKHAHENYLRDFGK 526 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 A IL+GTQM+AKG F +VTLV +L+ D L +D+RSAE L Q GR+GR K Sbjct: 527 HKADILLGTQMIAKGLDFENVTLVGILNGDALLNRSDYRSAELCYDLLEQACGRSGRGEK 586 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 QGEV++Q + +H +Q + Y F + + R + PP+T + + + A Sbjct: 587 QGEVIIQAYDTKHYAIQCAAHHDYKTFFKNEMNYRHLAGYPPYTYLISLTFSHKQEELAY 646 Query: 651 LFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA 710 Q +L+ + ++ VLGP K G R +ILL+ L Sbjct: 647 QGAQLAFSLLKAK----SEVRVLGPT--ALHKLRGECRIRILLKGKQEELLTAYAKDVYE 700 Query: 711 LINTIPDSRKVKWVLDVDPI 730 + +K + +D+ P+ Sbjct: 701 --QHLYKKQKARLDIDLSPL 718 >UniRef50_C4FT87 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FT87_9FIRM Length = 801 Score = 720 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 237/803 (29%), Positives = 383/803 (47%), Gaps = 81/803 (10%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 V + +P + R FDY +PE +++ G RV+VPFG +Q +G VV + S+ Sbjct: 2 FVKVIVDIPAAQVNRPFDYQVPEAYQDSLQLGMRVQVPFGNRQ-LLGFVVGIHHTSDFK- 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA-ANAPMW 116 LK + VLD E + L A H +VL LP +L+ Sbjct: 60 GTLKPITAVLDYESFINEELLDLSEHLAQTLHAFRINVLQAMLPAMLKVKYQNIFLIHQP 119 Query: 117 YWFATEQGQAVDLNSLKRSPKQ-QQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 + + + LN + Q + L+ + ++ V L + + + + + Sbjct: 120 QGLSDYELPSDWLNQSQLDKDQVEAQLSRKQIKQLLDQGVLELVYQVQDQTTTKTQTMIE 179 Query: 176 LASETPEFSDWRTNYAVSGERL-----------RLNTEQATAVGAIHSAADTFSAWLLAG 224 LA + +++ + EQ + A +A + L G Sbjct: 180 LAMPAESIKQIIQDLPARSQKVAQLLTYLLASGQPQWEQQALLAASQVSASSLKTALKHG 239 Query: 225 VTGSGK---------------------TE------------------------------- 232 S K TE Sbjct: 240 YIKSQKVSVYRDPLAHLEVEQSQSRTLTEAQKAVYEQVAQALEAHQDQTFLLEGVTGSGK 299 Query: 233 --VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 VYL ++ G+ A+++VPEI LTPQ + + + RF V VLHSGL +S++ W Sbjct: 300 TEVYLQLMAKASQMGRGAILLVPEIALTPQMVRQVKSRFQTGVAVLHSGLTNSQKYDEWR 359 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 + G+A IV+G RS++F P ++LG+++IDEEH+++YKQ + RYHAR++A++R H Q Sbjct: 360 RIIRGQATIVVGARSSIFAPIRDLGLVIIDEEHETTYKQSDTPRYHAREVAIWRCHYHQA 419 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---AGLAPAL 407 P++LGSATP+LE+ Q +Y+ LRL R ++D+ + Q L+ L Sbjct: 420 PLLLGSATPSLESRSRAQVGRYQHLRLPERVNGRPLPPVTLVDMTKEMAQQTTDELSSVL 479 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 ++ L Q++L LNRRG+A +LC +CG + +CPRCD T H+ +H L+CH+CD Sbjct: 480 KDKITDRLAKGQQIVLLLNRRGYASYMLCRECGQVIQCPRCDISLTYHKHEHRLKCHYCD 539 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 Q PVP +CP+C S +L GLGT+++E+ L FP + R+D DTT +KG E L Sbjct: 540 YQSPVPDRCPNCHSDYLRTFGLGTQKIEELLNQHFPDARVIRMDMDTTRKKGQHEALLDR 599 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 R A IL+GTQM+AKG F VTLV +++ D AL DFR+ E+ QL TQVAGR GR Sbjct: 600 FRRHEADILLGTQMIAKGLDFEAVTLVGVINADTALNLPDFRAGEKTFQLLTQVAGRTGR 659 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +GEV++QT++P+H ++Q Y++F + R + PP+ ++ Sbjct: 660 GRFEGEVLIQTYNPDHYVMQLAQQHDYESFFYYEMKRRHLGHYPPYFYTTLITISSKYQA 719 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A Q++ +L+S A L +LGP + R+ +Q+LL++ ++ + Sbjct: 720 KAQAMSHQVKQALLASGAA---LEILGPSQGAIARINERYYFQLLLKYKDGQVIKESLGA 776 Query: 708 TLALINTIPDSRKVKWVLDVDPI 730 L + + + + +D +P+ Sbjct: 777 ILDQ-SQLEAKQGIYITIDHEPL 798 >UniRef50_D1AH07 Primosomal protein N' n=1 Tax=Sebaldella termitidis ATCC 33386 RepID=D1AH07_SEBTE Length = 715 Score = 720 bits (1859), Expect = 0.0, Method: Composition-based stats. Identities = 203/734 (27%), Positives = 369/734 (50%), Gaps = 24/734 (3%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDAS--ELPLN 58 M + + F Y K G V F ++ R +++ ++ + + Sbjct: 1 MKYYVLYVE-NTKSFFTYK--SEEEYKPGEWCIVDFSGRK-RSAVILRETEEDKIDFDIK 56 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ++K + D + +L+ W A YY +V+ P +L+ Sbjct: 57 KIKEIDSRADILS-IPEDIIKLMDWMAVYYISDYYNVIKTVFPGILKLNYSQKAVFYKEL 115 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 E+ + + K+++ + + K + + + + A++ +K L + Sbjct: 116 ENAEKYNSETIKDFNDYMKKKKVVTSATLIKKFGKDLVSYAQSKDAVK--IEKHLVTKEN 173 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 + E T+ ++ + LN EQ V AI + + + +L+ G+TGSGKTEVY+ ++ Sbjct: 174 KIKEIE---TDGIINETDIELNEEQKNTVEAIENGNNDY--YLIKGITGSGKTEVYIRLI 228 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 +N L G ++ +VPEI LTPQ + R + F+ V +LHS L ER W K+G Sbjct: 229 KNALKSGGGSIFLVPEISLTPQMMDRLKREFSNNVALLHSRLTTKERKEEWNAIKSGNKK 288 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS-EQIPIILGSA 357 +VIG RSA+F P +NL I++DEEH+++YKQ+ RYH +++A+ RA+ E + +ILGSA Sbjct: 289 VVIGARSAVFAPVQNLKYIILDEEHETTYKQESNPRYHTKNVAIKRANLLENVKVILGSA 348 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQA 417 TP+ +T ++ LL L R +A+ + +++L Q V + L+ ++ + L Sbjct: 349 TPSFDTYYQAKEGVIELLELKNRYNDAKKPVYDLVNL--QNVNGNFSHELLEKISEKLLK 406 Query: 418 DNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCP 477 + Q+IL LNR+ F+ + C DCG + CP C ++ ++ L+CH+C ++ C Sbjct: 407 NEQIILILNRKAFSTFIKCRDCGTVETCPNCSISLNYYRKENKLKCHYCGYEKYFKPVCG 466 Query: 478 SCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 +CGS +L+ +G GTE++E L +F I RID + T + E+ + IL+ Sbjct: 467 NCGSKNLIHLGTGTEKIELELGEIFKDARILRIDSENTKTQEQFEKMYNDFKNHKYDILL 526 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ++AKG HFP+VTLV++++ D L DFR+ E+ QL TQ +GR+GR K+GEV++Q Sbjct: 527 GTQIIAKGFHFPNVTLVSIINADIILNFPDFRAGEKTYQLLTQASGRSGREKKEGEVLIQ 586 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 T+ P++ ++ + Y+ + E + R++++ PP+ + + ++ Sbjct: 587 TYDPDNDAIKKTISDNYEGYYENEMEIRKILKYPPYGRIINIVISSETETGLKEKAEKFY 646 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 N+I K P A + R+R+QI ++ R+ + +I + + + + Sbjct: 647 NMIKEKNSFIPK-----PFKAPIYRINNRYRYQIFIKS-DRISINNIKHRIRSSLVNYRE 700 Query: 718 SRKVKWVLDVDPIE 731 + V+ +DVDP+ Sbjct: 701 -KDVRISVDVDPVN 713 >UniRef50_B9ZMZ1 Primosomal protein N' n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZMZ1_9GAMM Length = 731 Score = 719 bits (1856), Expect = 0.0, Method: Composition-based stats. Identities = 304/734 (41%), Positives = 400/734 (54%), Gaps = 10/734 (1%) Query: 1 MP---VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 MP +A VAL PL R FDY +PE ++ G RVRVPFG+ E IGIVV++++ S++P Sbjct: 1 MPETGIAQVALDRPLDRLFDYRIPEDTDLRPGQRVRVPFGRG-EAIGIVVALANQSDVPE 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRP-AANAPMW 116 N+L+ + D++P+ T V LL + A YYHHP+G+ L ALP LR+G P AP Sbjct: 60 NKLREALGSPDAQPILTPMVLELLRFGARYYHHPLGEALLSALPPALRRGHPLPILAPEP 119 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 W T G R +Q L AL D+ + A + L Sbjct: 120 LWRLTAAGHRALAEGQVRGRRQLAILRALPALGAALDRTTLSTAAALQITAKDLRQLEAR 179 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLS 236 +D +G L EQ A+ A+ LL GVTGSGKTEVYL Sbjct: 180 GWLEQTRADPLAPAPPTGTGYTLTPEQEAAIAAVSPDDPRPM--LLEGVTGSGKTEVYLR 237 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 + + +A+G+Q L ++PEI LTPQ R ++RF V +LHSGL + ERL AW A+ GE Sbjct: 238 MAADAVARGRQVLFLIPEIALTPQLAGRIQQRFPGQVALLHSGLAEGERLRAWEAARQGE 297 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 IV+GTRSALF P G+I++DEEHDS++KQQ+G+RY ARDLA+ R E P++LGS Sbjct: 298 RRIVVGTRSALFVPLPEPGLIIVDEEHDSAFKQQDGFRYSARDLAIKRGQLEHTPVVLGS 357 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP LETL +Q +Y + L R +P +D + GL L+ M+Q L Sbjct: 358 ATPTLETLHAARQGRYTHVHLRSRPDGTQPPSVETIDTRVHSPDEGLTAPLLDAMQQTLA 417 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A Q + LNRRGFA L C CGW+A+CP CD + T+H CH C Q +C Sbjct: 418 AGAQCFVLLNRRGFARVLACESCGWVADCPDCDAHLTVHTQDRRAICHLCGHQERRAERC 477 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P CG L+ GLGT++LEQ LA FP PI R+DRD+ KGALE L + + A I+ Sbjct: 478 PECG-EALINRGLGTQRLEQALARHFPQTPIIRLDRDSVRHKGALETALDRIRQLDAAIV 536 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQMLAKGH FP V LV ++DVD LFS D R+ E QL Q AGRAGR G V+L Sbjct: 537 VGTQMLAKGHDFPRVGLVGVIDVDQGLFSVDLRATEHTLQLIVQAAGRAGRGDGGGRVLL 596 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT HP+HPL++ L Y A E LAER LPP+ +VR E A + + Sbjct: 597 QTGHPDHPLMRGLDAGNYPAMLEPLLAEREAAGLPPYGHLALVRVEAAEAAAAHRHAETI 656 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 +L++ L VLGP PA + R+R QILL+ R L + T Sbjct: 657 AGHLLAARHG--DLRVLGPAPAPRHRVNRRFREQILLRAAERQALHRTLTQARHAWQTED 714 Query: 717 DSRKVKWVLDVDPI 730 R V+ +DVDP+ Sbjct: 715 LPRGVRIAIDVDPV 728 >UniRef50_C1A6V7 Primosomal protein N' n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A6V7_GEMAT Length = 767 Score = 717 bits (1851), Expect = 0.0, Method: Composition-based stats. Identities = 265/760 (34%), Positives = 373/760 (49%), Gaps = 36/760 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 VAL VPL RTF Y +P G+ V G RV VPF + + IGI + A E Sbjct: 10 RCIEVALAVPLFRTFTYTVPAGIAWPVAVGSRVLVPF-RNRAEIGICLGPGTAPE--GVR 66 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK +V V+DSEP + W AD+Y PIG L LP LL Q + Sbjct: 67 LKPIVSVVDSEPSLPGPLIDTAQWIADWYAAPIGLTLRGMLPTLLLQTKTPTPRAKTQRV 126 Query: 120 ATEQGQAVDLNSLKRSPKQQQA-------LAALRQGKIWRDQVATLEFNDAALQALRKKG 172 + L +++ + + L A + + A+ K+G Sbjct: 127 VRVVQELPSLLQREQTFARARQQRVVYDLLEAQGGVAPVDALLVQANCTAGVIVAMVKRG 186 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 + ++ E E + N A + Q A+ AI + D +LL G+TGSGKT Sbjct: 187 IVEVKQEVVERDPFA-NRAGVAPPPEPSASQRAAIAAILAG-DPGQVFLLHGITGSGKTL 244 Query: 233 VYLSVLENVLAQ-GKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 VY+ VL VL Q G+ A+V+VPEI LT QT+ RFR F V VLHS L+D ERL AW Sbjct: 245 VYIEVLRAVLQQPGRTAIVLVPEIALTSQTVDRFRGAFGDSVAVLHSALSDGERLDAWQS 304 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 + GE I +G RSALF P + +GV+++DEEH+ SYKQ E RYHAR+ A+ RA +E Sbjct: 305 LRRGERRIAVGARSALFAPLERVGVVIVDEEHEGSYKQAETPRYHAREAAIVRARAEGAL 364 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG--------------- 396 ++LGSATP+LE+ + + L L RAG A ++D++ Sbjct: 365 VVLGSATPSLESWERANRGQATRLTLPDRAGGASLPPVQLVDMRAVTKIERAGRAPHAPY 424 Query: 397 QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 + L+PAL+ + + Q +L LNRRG+A L CH CG + CP C T H+ Sbjct: 425 DPMLGVLSPALLKAIESRMVRGEQTLLLLNRRGYAAYLQCHACGDVQVCPHCSISLTYHR 484 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 L CH+C Q VP C CG+ + G+GT+Q+E+ +A FP I+R+D DTTS Sbjct: 485 VPEALICHYCQYQAVVPTHCAHCGTESIRRRGMGTQQVERLVAERFPEARIARMDVDTTS 544 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 K A Q L V RG IL+GTQM+AKG FP+VTLV ++D D L DFR++ER Q Sbjct: 545 GKWAHTQILDRVGRGEVDILLGTQMIAKGLDFPNVTLVGVVDADTGLNLPDFRASERTFQ 604 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L +QVAGRAGR K GEV++QT P+ ++ L Y F ++ L R++ PP+ Sbjct: 605 LLSQVAGRAGRGPKGGEVIVQTRMPDAHAVRHALTHDYLGFVQEELEARQVPAYPPFVGI 664 Query: 637 VIVRAEDHNNQHAPLFLQQLRNLILS--SPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 V + + + A + ++GP P + RWRW L++ Sbjct: 665 ANVVVSGTHQHLVAEAAIAAAVWVRALLERHAIAGVSIVGPAPCPIDRIKDRWRWHFLVK 724 Query: 695 HPSRVRLQHIINGTLALI----NTIPDSRKVKWVLDVDPI 730 L + + + V+ V+D DP+ Sbjct: 725 TAQPRLLTRLARYVAERAPVGTDAAHRTADVRLVVDRDPV 764 >UniRef50_Q03FY4 Replication restart DNA helicase PriA n=50 Tax=Lactobacillales RepID=Q03FY4_PEDPA Length = 806 Score = 717 bits (1850), Expect = 0.0, Method: Composition-based stats. Identities = 245/810 (30%), Positives = 375/810 (46%), Gaps = 94/810 (11%) Query: 5 HVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQ-QERIGI------------- 45 +V + VP F Y+ + + +K G RV VPFGK + G Sbjct: 6 NVIVNVPALQTNTPFTYIANDAIKNDIKIGSRVIVPFGKSERPIQGFVVGEETTNEFEGL 65 Query: 46 --VVSVSDASELPLNELKAVVEVLDSE--------------------------------- 70 ++SV + L EL + E L + Sbjct: 66 KDIISVLEPEPLLNKELIELSEWLADQTYAFRVSCLNAMLPSLVKVNTKRFIKINETKIT 125 Query: 71 -----PVFTHSVW--------------RLLLWAADYYHHPIGDVLFHALPILLRQGRPAA 111 + +L W D + L + ++ Sbjct: 126 METVLALLGEEQVTDLKVNELSFSQQKQLNQWIKDEFV-----TLKYVTEDSAKKKMINW 180 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR-----QGKIWRDQVATLEFNDAALQ 166 P EQ Q K + KQ + L ++ +G + + L Sbjct: 181 LWPTMDLSEYEQEQKKL---RKNATKQVELLNIIKTLDVKKGISQASILNDYGVGRSTLN 237 Query: 167 ALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF--SAWLLAG 224 K G + + + L LN EQ +A I A + L+ G Sbjct: 238 TAVKNGWLVRKAVEQYRDPFEGRQMQLDQNLALNEEQQSAYNLITQAIEDKNAKPILVEG 297 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VTGSGKTEVYL ++ V+ +GK AL++VPEI LTP + R R RF V VLHSGL+D E Sbjct: 298 VTGSGKTEVYLQSIQQVIKKGKTALLLVPEISLTPLMVKRVRARFGTQVAVLHSGLSDGE 357 Query: 285 RLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYR 344 + W + E +V+G RSA+F P +N+G+I+IDEEH +YKQ + RYHARD+A++R Sbjct: 358 KFDEWRRIVRNEVKVVVGARSAVFAPLRNIGIIIIDEEHSETYKQSDAPRYHARDVAIHR 417 Query: 345 AHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA--- 401 A + P++LGSATP+LE+ V++ +Y +++ +RA V+D++ Sbjct: 418 AKKFECPVVLGSATPSLESRSRVERGRYDFVKIQKRANQKALPNIQVIDMRQHLGDGYNE 477 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + ++ +R + QV+L LNRRGF+ ++C CG++ CP CD T+H + Sbjct: 478 NFSAPMVEEIRHRILRKEQVVLMLNRRGFSSFVMCRTCGFVLTCPNCDVSLTMHMDSRTM 537 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 RCH+C + +PR C +CGS + G GTE+++Q LA + P + R+D DTT RKGA Sbjct: 538 RCHYCGHEEAIPRLCKNCGSDKIRFFGTGTEKVQQQLAEIIPEARVLRMDVDTTRRKGAH 597 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ L A IL+GTQM+AKG FPDVTLV +L+ D AL D R++ER QL TQV Sbjct: 598 ERLLERFGNHEADILLGTQMIAKGLDFPDVTLVGVLNADTALELPDLRASERTFQLLTQV 657 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGRA K GEV++QT +P+H ++ + Y+ F + + R + + PP+ V+V Sbjct: 658 AGRAGRADKTGEVLIQTFNPDHYAIRLAQKQDYEDFFYKEMYLRHLGKYPPYYYTVLVSV 717 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 D + + A ++ N+I P VLGP K ++ +QIL+++ +L Sbjct: 718 SDRDERQALKNAYEMLNIIQ--PQLSANAIVLGPTAKSISKIKQKYYYQILIKYQREPKL 775 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + L + + +D +P Sbjct: 776 HRALLEVLNKSQE-KFRQGTRISIDSEPQN 804 >UniRef50_C5EIZ7 Primosomal protein N' n=5 Tax=Clostridiales RepID=C5EIZ7_9FIRM Length = 767 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 235/762 (30%), Positives = 367/762 (48%), Gaps = 39/762 (5%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFG-KQQERIGIVVSVSDASELP 56 A++ + + + RTF Y +PE ++ + AG +V +PFG ++R G VV ++D +E+ Sbjct: 5 YANIIIDISHESVDRTFQYRIPEHLSGSIHAGQQVYIPFGQGNRQRKGYVVGLTDQAEID 64 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 N++K V ++ + L W + Y + L LP+ + Sbjct: 65 ENKIKDVAGIVQGSVTAESQLIWLAWWMKERYGSTMNQALKTVLPVKQKVKEAPKRQLKC 124 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGK--IWRDQVATLEFNDAALQALRKKGLC 174 +AV+ K + + L A + + + L A ++ L + G+ Sbjct: 125 LLDQEGLLRAVEEARRKNHKARLRLLEAFLLAPVIPYEEAMNRLSLTAAVVKPLEEGGVL 184 Query: 175 DLASETPEFSDWRTNYAVSGER------------------LRLNTEQATAVGAIHSAADT 216 + + ++G LN Q +I Sbjct: 185 KVEVVERYRNPLLEMQRLAGMPREGTTFAGGGTAGNPGTFPALNQAQQEIADSILRDYGE 244 Query: 217 --FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVE 274 +L+ G+TGSGKTEVY+ ++ +VL G+Q +V++PEI LT QT+ RF RF V Sbjct: 245 GIRRTYLIHGITGSGKTEVYMELIAHVLQAGRQVIVLIPEISLTWQTVMRFYTRFGNRVS 304 Query: 275 VLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR 334 V++S ++ ER + +A+ G+ I+IG RSALF PF NLG+I+IDEEH+++YK + R Sbjct: 305 VMNSRMSAGERYDQYERARTGDIDIIIGPRSALFAPFSNLGLIIIDEEHENAYKSELSPR 364 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLD 393 Y AR+ A RA + +ILGSATP+LE+ + +Y L + RA +A A ++D Sbjct: 365 YDAREAAAVRAEANHASLILGSATPSLESYTKALRGEYGLFTMKERAKADASLAKVEIVD 424 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 L+ + + L M L Q++LF+NRRG+A + C CG +CP CD Sbjct: 425 LREELRAGNRSIFSRRLQELMEDRLAKKEQIMLFINRRGYANFVSCRSCGEAIKCPHCDV 484 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 TLH+ + CH+C P+ CPSCGS ++ P G GT+++E A LFP I R+ Sbjct: 485 TLTLHR-NGRMMCHYCGYSMEQPKVCPSCGSRYIAPFGTGTQKIEAMAAGLFPDAGILRM 543 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DTTSRKG ++ L+ RG A ILIGTQM+ KGH FP VTLV L D +LF++D+R Sbjct: 544 DLDTTSRKGGHQEILSAFARGEADILIGTQMIVKGHDFPKVTLVGALAADLSLFASDYRC 603 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 E+ L TQ AGRAGR +G VV+QT+ P+H +Q + Y+AF Q A RR++ Sbjct: 604 GEQTFALLTQAAGRAGRGELEGNVVIQTYQPDHYCIQAAARQDYEAFYGQETAYRRLLGY 663 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE------KLWVLGPVPALAPKRG 684 PP + ++ + + + L ++GPV A K Sbjct: 664 PPAVGLLTIQMACPREDVVEQAAGRTAGWVEGWKAGQDRNGPGRDLKLIGPVNAPVYKVN 723 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 +R + ++H + L I + + D Sbjct: 724 DIYRKILYIKHENYDILIQIRKMAELRLKEAEGRFGLTIQYD 765 >UniRef50_B1MXU0 Primosomal protein N' n=6 Tax=Lactobacillales RepID=B1MXU0_LEUCK Length = 806 Score = 713 bits (1840), Expect = 0.0, Method: Composition-based stats. Identities = 227/809 (28%), Positives = 355/809 (43%), Gaps = 90/809 (11%) Query: 2 PVAHVALPVPL---PRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A + + VP + + Y +P+ M ++AG RV VPFG + G V+++ +++P Sbjct: 5 QFAQIIVDVPTMQTNQPYTYQVPDNMVGIIQAGMRVDVPFGGRHVM-GFVIALVSDTDVP 63 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 + +LK + +LD P + RL + A +L LP L+ + Sbjct: 64 VQQLKTITHILDLTPALNEELLRLSDYLAAETFAFRITILQTMLPNALKASYERILTLID 123 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + Q L + Q + KI R + A + Sbjct: 124 EV--DDDTQQRLFKGLDQVTYQAREWTTEDIEKITRLRRAGKIEVTVKVNNKANIKTQLA 181 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-------------FSAWLLA 223 + + Y +Q + I A L Sbjct: 182 YQMSADIEFLENEYQALKTNA---KKQRQLLTFILGHMGEKWSKRDLQAQLAVHDAVLNH 238 Query: 224 GVT--GSGKTEV--------------------------YLSVLENVLAQG---------- 245 VT KT + + + +G Sbjct: 239 AVTHQWLTKTRIEQLRDPLATVAVGPTSPLALNSEQQSAFEAIIHAADEGQYQPFLLEGI 298 Query: 246 --------------------KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSER 285 K L +VPEI LTPQ + R + RF A VLHSGL+D ER Sbjct: 299 TGSGKTEVYLQAAQHVYNQGKTILFLVPEIALTPQMVQRVKSRFGAQTAVLHSGLSDGER 358 Query: 286 LSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA 345 W + + + IV+G RSA+F P ++LG+I++DEEH+++YKQ + RY+ARD+A++R Sbjct: 359 YDEWRRIERDDVKIVVGARSAVFAPLRHLGLIIVDEEHETTYKQSDNPRYNARDVALWRG 418 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR-AGNARPAIQHVLDLKGQKVQA--- 401 +IP++LGSATP+LET Q+ Y L +LT R A AR ++D+K Sbjct: 419 EYHRIPVVLGSATPSLETRARAQRGVYALCQLTNRAAVGARLPQVEIIDMKETLAAGPET 478 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 + L + L Q IL LNRRG++ ++C DCG++ P C+ TLH L Sbjct: 479 NFSDQLRQALNDCLARGEQAILMLNRRGYSSFVMCRDCGYVPRDPNCNLAMTLHMDTKTL 538 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 +CH+C + +P QC CGS + G GTE++E LA L P + R+D+DTT +KG++ Sbjct: 539 KCHYCGHEEAIPTQCAHCGSKRIRYYGTGTEKVEAELATLLPQARVIRMDQDTTRKKGSM 598 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 + L + A IL+GTQM+AKG F +VTLV +L+ D AL DF ++ER QL TQV Sbjct: 599 TKMLTRFGQHEADILLGTQMIAKGLDFANVTLVGVLNADTALGLPDFHASERTFQLLTQV 658 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 +GRAGRA K G+V +QT +P H + Y+ F +Q +A R P+ + ++A Sbjct: 659 SGRAGRAKKAGKVFVQTFNPTHYAIAYAKNHDYEGFYQQEMAVRHAGNYAPYFYTIQIQA 718 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + + Q+ + S A + +LGP P K R+ +QI+L+ R + Sbjct: 719 SHTDENTIAKQMFQIVRWLKSR--ASNDVIILGPSPKPIAKLRNRYYFQIILKFKQRDEM 776 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPI 730 ++ ++ +D DP+ Sbjct: 777 DVLLTTLYNRAQ--KAKDDLQLSIDRDPV 803 >UniRef50_C6WTS9 Primosomal protein N' n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTS9_METML Length = 752 Score = 712 bits (1838), Expect = 0.0, Method: Composition-based stats. Identities = 311/753 (41%), Positives = 428/753 (56%), Gaps = 28/753 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 P+ +AL VPL R FDYL G V+ G RV VPFG++ + IGIV+ +D+SE + +LK Sbjct: 4 PILQIALDVPLARLFDYL-SAGQQVQVGQRVLVPFGRRNQ-IGIVMDEADSSEFAIEKLK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + + E V L+ ++ADYYH+P G L ALP LRQ PA + + T Sbjct: 62 PITQAFSDEVPLDAEVLSLIRFSADYYHYPFGQALLAALPARLRQVAPAVARKQYCYQIT 121 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + G+ VDL SL + + + + Q + + + + +A +A ++ A+ Sbjct: 122 DAGRQVDLESLPKRQRVLRLVLQALQAEGEQTEAVLDALSGSARKAAKELVNLGYATAEQ 181 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + R + + LN EQA AV +I F AWLL G+TGSGKTEVY+ ++++V Sbjct: 182 VLAVKRVPAILQTPQPALNAEQAAAVTSITQEIQVFKAWLLHGITGSGKTEVYIRLMQHV 241 Query: 242 LAQGK--------QALVMVPEIGLTPQTIARFRERFN-APVEVLHSGLNDSERLSAWLKA 292 L QG Q LV+VPEI LTPQ ARFR R + LHS L++SERL W A Sbjct: 242 LQQGADGAAQQSAQVLVLVPEINLTPQLEARFRTRLPQYNLVSLHSSLSESERLHNWQLA 301 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPI 352 ++G A I+IGTR ++FTP NL +I+IDEEHDSSYKQQ+ RYHARD+A+ RA IP+ Sbjct: 302 QSGAAQIIIGTRLSIFTPIPNLKLILIDEEHDSSYKQQDSMRYHARDVALVRAKRLNIPV 361 Query: 353 ILGSATPALETLCNVQ-------------QKKYRLLRLTRRAGNA-RPAIQHVLDLKGQK 398 ++GSATPALE+ N KY LL L +RA +A + +D Sbjct: 362 VMGSATPALESWYNAMGSNGQATSAASSQPNKYGLLTLKQRAVSAAQLPKIDCIDTTKVN 421 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 +Q GL P L+ +R L+ Q +LF+NRRG++P LLC C WIA C RC +H Q Sbjct: 422 LQHGLTPQLVAALRLRLERKEQSLLFINRRGYSPVLLCTACHWIAPCTRCSSRLVVHLGQ 481 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 LRCHHC ++ +P QCPSCG L P G GT++LEQTLA L P I+R+DRD+ SRK Sbjct: 482 KKLRCHHCGHEQRIPHQCPSCGDADLHPTGHGTQRLEQTLATLLPTARIARVDRDSISRK 541 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 AL + L VH IL+GTQMLAKGH FP++TLV ++D D AL S DFR++ER Sbjct: 542 HALVEILDRVHNQEIDILVGTQMLAKGHDFPNLTLVGVIDTDSALHSPDFRASERLFAQL 601 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QVAGRAGRA K G+V++QT PEH L L + Y ++A L ER +Q PP+ + Sbjct: 602 MQVAGRAGRADKAGQVIIQTAFPEHALFNALRSQDYASYANDLLQEREQVQFPPYVFTAL 661 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 +RAE H+ FLQ S+ +++ PV + G R IL+ R Sbjct: 662 LRAEAHDFPLVQQFLQLA---FSSARALSQQVVTYDPVRPQMERLKGMERGYILMHAQQR 718 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 LQ ++ + + P + KV+W +DV+P+E Sbjct: 719 PALQKLLTQLVHQLRAAPIAAKVRWAVDVNPLE 751 >UniRef50_C6J2B4 Primosomal protein N' n=2 Tax=Bacillales RepID=C6J2B4_9BACL Length = 854 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 226/679 (33%), Positives = 334/679 (49%), Gaps = 27/679 (3%) Query: 75 HSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKR 134 L+ + +R+ A A ++ A +R Sbjct: 177 PEAAGLIKDMLARGVLTESQAIKD----KVRKKTVKTVAAAVSGQAAQEALASFGPQARR 232 Query: 135 SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSG 194 + Q L + + +D ++TL+ ++ L +KG + ++ Sbjct: 233 QKEVLQYLLEVGLPQSLQDVLSTLQVTAGTVKKLAEKGFAVIEDVEVFRDPYQGRRFQRS 292 Query: 195 ERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 E L EQ + A +LL GVTGSGKTEVYL +E +A G+QA+V+V Sbjct: 293 EPLPRTPEQELVYRRLAETLDAQRHEVFLLHGVTGSGKTEVYLQTIERCIASGRQAIVLV 352 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ + RF+ RF A V VLHS L+ ER W K + G + IG RSA+F PF Sbjct: 353 PEISLTPQMVERFKGRFGAKVAVLHSRLSTGERYDEWRKIREGRVEVAIGARSAIFAPFS 412 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 LG+IV+DEEH++SYKQ+E +YHARD+AV RA +ILGSATP+LE+ + Sbjct: 413 RLGLIVMDEEHETSYKQEETPKYHARDVAVRRARQHGAAVILGSATPSLESYHAARSGGG 472 Query: 373 R-------LLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVI 422 LL + +R +R ++D++ + + + AL + L+ Q + Sbjct: 473 EFGEFAPILLEMKQRPAGSRLPGVQIVDMREELKEGNRSMFSRALHQGIAARLERGEQTV 532 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 L LNRRG++ ++C CG++A CP CD T HQ ++LRCH+C P CP CGS Sbjct: 533 LLLNRRGYSTFVMCRTCGYVASCPNCDISLTYHQKSNNLRCHYCGYAEAAPSVCPECGSE 592 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 H+ G GT+++E LA LFPG+ + R+D DTTS KGA E+ L +L+GTQM+ Sbjct: 593 HIRYFGTGTQRVEGELAKLFPGIRVIRMDVDTTSEKGAHEKLLQAFREKKGDVLLGTQMV 652 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKG FPDVTLV ++ D AL DFRSAE+ QL TQVAGRAGR GEV +Q++ PE Sbjct: 653 AKGLDFPDVTLVGVIAADTALNFPDFRSAEKTFQLLTQVAGRAGRHQLPGEVFIQSYMPE 712 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 H + Y +F + L R+ M PP++ ++V + + + Sbjct: 713 HYSIVHASGHDYLSFVREELKTRKTMHYPPYSRLILVTLSHEKLPLLLRMAENFAGDLRA 772 Query: 663 SPLAD-----------EKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 L +LGPV + P+ R+R Q ++++ + ++ T A Sbjct: 773 KAQRQGWFGSLDRFVPAALDILGPVASPIPRIKNRYRIQCMVKYRGDLDAVSLVQETAAA 832 Query: 712 INTIPDSRKVKWVLDVDPI 730 ++ +DVDP Sbjct: 833 TLDQWRDALLQISIDVDPQ 851 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%) Query: 2 PVAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 +A V + VP R FDYL+PE M ++ G RV VPFG++ + G VVS+ + E+ Sbjct: 4 RMAKVIVDVPSRETDRPFDYLIPESMAGWIEVGSRVGVPFGRRTVQ-GFVVSLHEQPEMD 62 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 +K + E+LD P + L W + Y + L +P L+ Sbjct: 63 PARMKPIQELLDMMPPLPPDLVELAEWMSRKYACSLIAALQAMIPAALKGKAERYIR 119 >UniRef50_D1PM71 Primosomal protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PM71_9FIRM Length = 755 Score = 710 bits (1834), Expect = 0.0, Method: Composition-based stats. Identities = 229/747 (30%), Positives = 367/747 (49%), Gaps = 24/747 (3%) Query: 4 AHVALP---VPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQ-QERIGIVVSVSD-ASELP 56 VA+ + + + Y +P+ + V G V VPFG+ + R+ +V+ V + + Sbjct: 6 VQVAVDNATIHFDKLYSYRIPDALLGRVWPGSMVLVPFGRGDKPRMAVVLRVEELDAGAA 65 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK + + + T + L+ + D + + +P + + Sbjct: 66 PKRLKMLHDAAPEQTRLTPDLLELVHFLKDRTFCTWFEAVKAVIPYGAQYRAAVVDGKPV 125 Query: 117 YWFATEQGQA-------VDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR 169 + K P+Q+ A+ ALR+G + Q+ + + L L Sbjct: 126 MQSRLSRSTERVYTLTGELPQKPKPGPRQKAAVEALRKGPLTAHQLDEVGISKTTLDTLC 185 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTG 227 +KG+ +A + + + + + L EQ A A+ + A LL GVTG Sbjct: 186 EKGVLSVAEQDKALDLFA-DIPYEPQPITLAPEQQRAFAALAPDLEDGKPHAALLHGVTG 244 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKT V+L ++E L G++A+V+VPEI LTPQ I R + F + + V HS LN++ERL Sbjct: 245 SGKTIVFLKLIERTLELGRKAIVLVPEISLTPQMIRRLKSTFGSRLAVQHSALNNTERLL 304 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHS 347 W + G A IV+GTRSA+F P +N+G+I++DEE + +Y+ + RY A D+A RA Sbjct: 305 QWRLIQQGHADIVVGTRSAIFAPLQNIGLIIMDEEQEHTYQSESAPRYDAHDVAKKRAAM 364 Query: 348 EQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LA 404 E ++ SATP ET + KY+LL LT+R G +D++ + ++ Sbjct: 365 ENSLLVFASATPMTETYHAAESGKYKLLTLTQRYGGRPLPQVDFIDMRAELAAGNPREVS 424 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 +I ++++L+ Q IL LNRRG+ +C CG + +CP C H+ Q L CH Sbjct: 425 TRMIRELQENLENGEQSILLLNRRGYHTVAMCASCGHVLKCPNCSVPLVYHKPQQALMCH 484 Query: 465 HCDS-QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQ 523 HC RP+P+ CP CG L G GT+++E+ LA L PG I R+D+D+T++K A E Sbjct: 485 HCGHIVRPLPQLCPECGG-KLNYSGFGTQRVEEELAELLPGARILRMDQDSTNQKNAHET 543 Query: 524 QLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAG 583 LA+ R IL+GTQM+AKG F VTLV +L +D LF FR+ E L TQV G Sbjct: 544 MLAQFGRQEYDILLGTQMVAKGLDFEKVTLVGVLGIDSLLFGQGFRAYESVFSLVTQVIG 603 Query: 584 RAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAED 643 R GRA G ++QT P HP+LQ + Y+AF + +A R+ PP+ + +V Sbjct: 604 RGGRAALPGRALIQTTVPNHPVLQLAAAQDYEAFYREEIAFRKFGLYPPFCAFCVVGFVG 663 Query: 644 HNNQHAPLFLQQLRNLI--LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + + L+ ++ L +LGP P G++R+++ L+ + Sbjct: 664 AAEGTVAMAAHRFGTLLAERAAQHPQIPLRLLGPAPMGITMLNGKYRYKLTLKCRNNAAF 723 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ TL +K +LD + Sbjct: 724 RSLLQETLDAYAQEKLPQKASVILDFN 750 >UniRef50_A0Z8I4 Primosome assembly protein PriA n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=A0Z8I4_9GAMM Length = 735 Score = 709 bits (1831), Expect = 0.0, Method: Composition-based stats. Identities = 301/731 (41%), Positives = 428/731 (58%), Gaps = 10/731 (1%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + A+P+P+ DYL +G G R+ +P G +Q +G+V + + + +L Sbjct: 11 LLRCAVPIPVRGYLDYLPVKGGNAVPVAGGRILIPLGSRQ-LVGVVTEILGFTAISPEKL 69 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K LD P+ V LL W ADYY HP G+ L L R+G P A+ + Sbjct: 70 KCAKAYLDDTPLIDSIVLELLGWTADYYQHPPGETLILGLSPRERRGEPPASTHEAGFSL 129 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 T +G+ + +L R+P+QQ +AALR G R ++ + F L+AL + L + Sbjct: 130 TIRGEGLSDAALSRAPRQQALIAALRAGPKTRAELRAIGFKPDNLRALITRSLIE----- 184 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + L N EQ+ A+ I+++ FS LL GVTGSGKTEVYL + Sbjct: 185 -PMAMLANKTWSCRAPLPANNEQSLAITHINASLGEFSCHLLEGVTGSGKTEVYLQAIAA 243 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 LA+ +Q LV++PEIGLTPQ + RF ERF+AP+ LHSGL ++ER W A++G+AAI+ Sbjct: 244 ALARQEQTLVLIPEIGLTPQLVRRFNERFDAPIVTLHSGLGNAERDRNWQAARSGQAAII 303 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+F P G+I++DEEHD S QQ+G RY ARD+AV RA PI+LGSATP+ Sbjct: 304 IGTRSAVFAPMLTPGLIIVDEEHDVSLSQQDGLRYSARDVAVKRAQLSGCPIVLGSATPS 363 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 LE++ N +YR RLT+RA A P +H++D++G ++AGL+P L ++M + L Q Sbjct: 364 LESMANATNARYRWHRLTQRAAGASPPTKHIVDIRGLALRAGLSPQLQSKMTEVLSRGEQ 423 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCG 480 V+LFLNRRGFAP LLCHDCGW AEC CD TLH+ ++CHHC Q P+P++CP C Sbjct: 424 VLLFLNRRGFAPTLLCHDCGWTAECQNCDARQTLHKKPPRVQCHHCGQQSPLPKRCPECQ 483 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 LV GLGTEQ EQ L FP +P+ R+D D+ S + A+ V + GA I++GTQ Sbjct: 484 GHRLVASGLGTEQTEQALRKDFPEIPVHRVDSDSMSGRHAMATFTQAVEQTGACIMLGTQ 543 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 +LAKGHHFP VT V +LD D L S DFR ER AQL TQV GRAGRA + GEV++QT H Sbjct: 544 LLAKGHHFPKVTCVGILDADSLLMSPDFRGEERLAQLLTQVGGRAGRAQQPGEVIVQTRH 603 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 PEHP++ +L K + A + Q L R+ LPP + +R + + + FL + Sbjct: 604 PEHPIITAVLEKSWRALSAQLLLSRKAQGLPPNGALAALRCDSASAESGAAFLLAIMEKY 663 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 + + + ++GP+ A +R G +R I++ R ++ + +AL + Sbjct: 664 HRT-TPNPSIRLVGPLSAPMARRAGLYRSHIVITGAQRSKVHASVKILVALASEHRIPTG 722 Query: 721 VKWVLDVDPIE 731 ++W +D+DP E Sbjct: 723 LRWFVDIDPSE 733 >UniRef50_A6TRW9 Primosomal protein N' n=3 Tax=Clostridiales RepID=A6TRW9_ALKMQ Length = 829 Score = 708 bits (1828), Expect = 0.0, Method: Composition-based stats. Identities = 208/640 (32%), Positives = 329/640 (51%), Gaps = 14/640 (2%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFN 161 ++ L LK + KQ+ L L++ +WR D + E + Sbjct: 186 MKTKVKIKTETYMELKIDHHELERCLEGLKNAKKQKTILLLLKEQPVWRIKDLMIAGEAS 245 Query: 162 DAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSA 219 A + L +KG+ + + + + N EQ + I + Sbjct: 246 RATINTLIEKGMASIYEKEVRRDPLAQQDYAAFPKFLPNEEQKGVIDEITQLIKQERRQN 305 Query: 220 WLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSG 279 +LL G+TGSGKTE+YL ++E V GKQ +V+VPEI LTPQTI RF+ RF + VLHS Sbjct: 306 YLLHGITGSGKTEIYLQLIEEVNRMGKQGIVLVPEIVLTPQTIERFKGRFGDGIAVLHSH 365 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARD 339 L+D ER W + ++GE VIG RSA+F P +NLG+I+IDEEH+ +YK ++ +YHA + Sbjct: 366 LSDGERFDEWRRIQSGEVNTVIGARSAIFAPLQNLGLIIIDEEHEHTYKSEQNPKYHAVE 425 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQK 398 +A R E +ILGSATP++E + ++ +L+ L +RA ++D++ + Sbjct: 426 VAKQRGVIENAIVILGSATPSVEDYSLTENEETIKLMTLNKRATQGELPPVEIVDMREEL 485 Query: 399 VQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + L+ L T + ++L+ Q ILFLNRRG++ + C CG++ +C CD T H Sbjct: 486 DEGNKSILSKRLHTAIEENLEKRKQTILFLNRRGYSTFISCRQCGYVVKCKHCDISMTYH 545 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 A +L+CH+C PR CP C S+++ G GT+++E+ + F + R+D DTT Sbjct: 546 MASGNLQCHYCGESLEPPRICPECSSSYIKYFGTGTQKMEKIVQQQFSKANVERMDLDTT 605 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 SRKG+ + L +G ILIGTQM+AKG FP+VTLV ++ D L DFR++E+ Sbjct: 606 SRKGSHGRILERFKKGEIDILIGTQMIAKGLDFPNVTLVGIVSADMMLNFPDFRASEKTF 665 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL TQVAGRAGR G V+LQT+ P+H + Y F E L R+ PP+ Sbjct: 666 QLITQVAGRAGRGLDPGVVILQTYDPDHYSILAASKHDYRTFYEDELMIRKAFGYPPFNK 725 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW----VLGPVPALAPKRGGRWRWQI 691 + + + +++ + I + +LGP P++ K ++R+Q+ Sbjct: 726 LINLNFSGVSEMQVITVTKKIVDGIKYILNKKGFIDLDEVILGPNPSVIGKINRKYRYQV 785 Query: 692 LLQHPSRV--RLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +L+ L+ ++ L + +D++P Sbjct: 786 ILKDQGVPFILLKKVVKYLLIDQRQRFIPDTIHSSIDINP 825 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/228 (19%), Positives = 83/228 (36%), Gaps = 16/228 (7%) Query: 3 VAHVALPV---PLPRTFDYLLPEGM--TVKAGCRVRVPFGK-QQERIGIVVSVSDASELP 56 +A V + + + FDY +P+ + ++ G RV VPFG ++ V+ + + S Sbjct: 7 IAQVIVDHKNHHIDKAFDYGIPDHLLGKIQRGMRVLVPFGNGNKKLEAYVLKIMEHSG-A 65 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK V+E++D +P+ +L+ W Y + + +P + Sbjct: 66 KQRLKKVIELIDQKPILREEQMKLIQWIKQEYLCKYIEAIHCIVPRGMIHREEKMVT--- 122 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFN--DAALQALRKKGLC 174 + + + K +AL A+ + LE L L +KGL Sbjct: 123 --LINDHWRQEISTQATKQLKVLEALEAMGGKTPYDKLNKALELKDMSQILNNLSEKGLL 180 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 DL E + + E + E + + +A + LL Sbjct: 181 DLTYEMK--TKVKIKTETYMELKIDHHELERCLEGLKNAKKQKTILLL 226 >UniRef50_C6D4F8 Primosomal protein N' n=8 Tax=Bacilli RepID=C6D4F8_PAESJ Length = 833 Score = 707 bits (1825), Expect = 0.0, Method: Composition-based stats. Identities = 224/631 (35%), Positives = 332/631 (52%), Gaps = 24/631 (3%) Query: 124 GQAVDLNSLKRSPKQQQALAALRQG---KIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + N R+ KQ++ LA + + + +A + A+++AL KGL L Sbjct: 200 AREALANFPARAGKQRELLAFMLERGEAMPLQALLAEAGGSPASVRALADKGLLGLHEVE 259 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSGKTEVYLSVL 238 E + L L Q I + LL GVTGSGKTEVY+ + Sbjct: 260 QERDPYAGRDFERTVPLPLMPGQQDVYERIAGTVSRGEPQVLLLHGVTGSGKTEVYMQSI 319 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 ++ L GKQA+V+VPEI LTPQ + RF+ RF V VLHS L++ ER W K ++ Sbjct: 320 QHCLELGKQAIVLVPEISLTPQMVERFKGRFGEAVAVLHSRLSNGERYDEWRKIRSRRVQ 379 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 + IG RSA+F PF+ +G+I+IDEEH+SSYKQ+E +YHARD+AV RA ++LGSAT Sbjct: 380 VAIGARSAIFAPFERIGLIIIDEEHESSYKQEESPKYHARDVAVRRARQHGAAVVLGSAT 439 Query: 359 PALETLCNVQQKKY-----RLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 P+LE+ ++ LL + R G+ V+D++G+ + L Sbjct: 440 PSLESFAAASRQPAPGKESALLPMPERVGSRPMPPVQVIDMRGELQDGNRSMFSRKLHAA 499 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR 470 + L+ Q +L LNRRG++ ++C CG+ A CP CD T HQ LRCH+C Sbjct: 500 LADRLERGEQSVLLLNRRGYSTFVMCRSCGYTAACPHCDISLTYHQKSRALRCHYCGHAE 559 Query: 471 PVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHR 530 P++CPSC S H+ G GT+++E+ LA LFPG+ + R+D DTTS K + E+ L + Sbjct: 560 LAPKECPSCSSEHIRYFGTGTQRVEEELAKLFPGIRVIRMDVDTTSEKHSHEKLLKQFGE 619 Query: 531 GGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK 590 A +L+GTQM+AKG FP VTLV ++ D +L DFRSAER QL TQVAGRAGR Sbjct: 620 RKADVLLGTQMVAKGLDFPYVTLVGVIAADTSLNLPDFRSAERTFQLLTQVAGRAGRHHL 679 Query: 591 QGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAP 650 GEV++QT+ PEH + T + Y AF + L R +M PP+ V+V Sbjct: 680 PGEVIIQTYSPEHYAILTAQHHDYAAFVREELKHRSVMGYPPYCRLVLVTMSHEQLPLLS 739 Query: 651 LFLQQLRNLILS-----------SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 +Q + + +LGPV + + R+R+Q ++++ + Sbjct: 740 SVSEQFAERLRGLASDEGVLGPLEGGLPRAMDILGPVASPISRMKDRYRFQCVIKYRGNI 799 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + ++ +A ++ V++ +DVDP Sbjct: 800 DIPALLRHAMAPFVEGSQAKLVQFSIDVDPQ 830 Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats. Identities = 47/224 (20%), Positives = 78/224 (34%), Gaps = 12/224 (5%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + VP R FDY +P GM ++ G RV VPFG + G V+ +++ +++ Sbjct: 2 IAKVIVDVPSRQTDRPFDYKVPPGMENWIEVGSRVGVPFGPR-VLQGFVIELAETADVDP 60 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 +LKAV E+LD P + L W +D Y L +P L+ Sbjct: 61 MKLKAVSELLDPVPPLLPDLIELAKWMSDKYCCSWTTALQAMIPAALK----GKAERYIS 116 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 A D P++ ++ AA++ + GL L Sbjct: 117 LNDDPDYTAEDYGLTALLPEEMLTWIGRQKQLKLETLQQRYPEQTAAIKEALRDGL--LQ 174 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 +T ++ A+ + A L Sbjct: 175 EQTSIRDRLAIRKVLTVFPPDDEAAAREALANFPARAGKQRELL 218 >UniRef50_C7NDX7 Primosomal protein N' n=4 Tax=Leptotrichia RepID=C7NDX7_LEPBD Length = 760 Score = 706 bits (1822), Expect = 0.0, Method: Composition-based stats. Identities = 212/774 (27%), Positives = 366/774 (47%), Gaps = 59/774 (7%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASE--LPLN 58 M + + T+ Y + G V F ++++GI++++ + ++ ++ Sbjct: 1 MYYYEIYVENNQ-GTYTYK--SEEKYEIGQWCIVNFI-NKDKMGIIIAIVNENQIQFDIS 56 Query: 59 ELKAVVEVLDSEPVF--THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 ++K + D+ PV + +L+ W +YY V+ P L+ Sbjct: 57 KVKKIK---DAAPVLSIPSDIMQLIRWIKNYYISDYYSVIKAVYPGALKLNYSKKAIFQR 113 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + + V ++ + ++ +++ + F+ ++ + + + Sbjct: 114 EFSENNETLEV-----EKIEEIKKFNEYMKKRQEVTVVTLKKNFSSEIVERAVNEKVISI 168 Query: 177 ASE----TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 + + + + + + LN EQ AV I ++ + +LL G+TGSGKTE Sbjct: 169 EKKVILNSKISKREKGKSEIVEKEIILNDEQQKAVDTIKNSENQ--IFLLKGITGSGKTE 226 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 +Y+++++ L QG ++ +VPEI LT Q I R E F+ V +LHS L D E+ W Sbjct: 227 IYINLIKEALKQGFGSIFLVPEISLTVQMIQRLEEEFHNEVAILHSKLTDKEKREEWTFI 286 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRA------- 345 +NGE IVIG RSA+F P +NL I++DEEH+++YKQ+ RYH +++A+ RA Sbjct: 287 RNGEKKIVIGARSAVFAPVQNLKYIIVDEEHENTYKQENNPRYHVKNVAIKRAFLQNENL 346 Query: 346 ------------------------HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA 381 SE+I +ILGSATP+ ET QQ L+ LT+R Sbjct: 347 KKDEKLEKNSELEKNDNLEEAEIVKSEKIKVILGSATPSFETYYQAQQGDIELIELTKRY 406 Query: 382 GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGW 441 NA+ ++DL + L+ ++ Q LQ + QVIL LNR+ F+ L C DCG Sbjct: 407 KNAKLPKFEIVDLNE--TTENFSEELLDKISQTLQKNEQVILILNRKAFSNLLKCKDCGN 464 Query: 442 IAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 I CP C ++ + L+CH+C ++ C CG + +G GTE++E+ LA Sbjct: 465 IPTCPNCSISLNYYKYDNRLKCHYCGYEKRFDNTCDECGGHKMRQIGAGTEKIEEELAIA 524 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 FP I R+D ++ K E+ + I++GTQ++AKG HF +VTLV +++ D Sbjct: 525 FPSAKIVRVDSESIKTKQNYEKAYNDFKNHKYDIMLGTQIIAKGLHFSNVTLVGVINADI 584 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 L DFR++E+ QL TQ +GRAGR K GEV++QT + E+ +++ + Y+ + + Sbjct: 585 ILNFPDFRASEKTFQLLTQASGRAGRGEKDGEVIIQTFNGENDVIKKTIESDYEGYYKNE 644 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW----VLGPVP 677 + R+M+ PP+ +I+ + LR I + A L + Sbjct: 645 MIMRKMLNYPPFGRIIILVISATEENLVMEKAKILREEITRNVNATMNLTSNDFISDAFK 704 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + K GR+R+QI + L+ + +KV+ +DVDP+ Sbjct: 705 SPIYKINGRYRYQIFFKFERENILKIKKIIKKCVGKFREREKKVRITIDVDPVN 758 >UniRef50_C3WCB2 Primosomal protein N n=2 Tax=Fusobacteriaceae RepID=C3WCB2_FUSMR Length = 769 Score = 705 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 212/781 (27%), Positives = 368/781 (47%), Gaps = 64/781 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + Y + G RV + F + ++R G++++ D +E + Sbjct: 1 MRYYKIYVD-NTRELYTYE-DREDKYEVGDRVIISF-RGKQRTGLIIA-QDTNEEKNYRV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + + +++ + + +LL+W +YY V+ A+P L P Sbjct: 57 LPIQKRMENSIKLSENYIKLLVWIKNYYMSSYEQVITSAIPSGLSVKYEKFYFPRDIVEF 116 Query: 121 TEQGQAVDLNS-----------------------------------------------LK 133 + L Sbjct: 117 LDTEVISPEIREYFRKRVSITKGALSKNFGLDKINSLLKSGLLLKDGKVNIVVDYSKILD 176 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS---ETPEFSDWRTNY 190 ++ ++ + +++ F L+ L K G L E + Sbjct: 177 LELVEKNIYEYFKRREKVKEETLEKIFPKKELEKLLKAGDLRLEKFIKAEEEKVEEIDEI 236 Query: 191 AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 + LN EQ A I S + +LL GVTGSGKTEVY+S++++ +GK ++ Sbjct: 237 EIESRDRELNEEQKKARETIISGIE--KNYLLKGVTGSGKTEVYISIIKSAFNKGKGSIF 294 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQ I RF+ F + +LHS L SER W G+ IV+G RSA+F P Sbjct: 295 LVPEISLTPQMINRFKGEFKENIAILHSKLTASERAKEWYNIYIGKKKIVLGVRSAIFAP 354 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 +NLG I +DEEH+++YKQ RY+A+ +A+ RA E +ILGSATP++ET Q+ Sbjct: 355 VENLGYIFLDEEHETTYKQDNNPRYNAKQVAIKRAELEGAKLILGSATPSIETYYFSQKN 414 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGF 430 ++L+ L R NA ++D+KG++ + L+ +R+ L QV+L LNR+G+ Sbjct: 415 LFKLVELKNRYNNALLPEIEIVDMKGEESI-YFSKRLLEEIRKTLLKGEQVLLLLNRKGY 473 Query: 431 APALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLG 490 + + C DCG++ EC C Y+ + +Q L+C++C + C CGS++L+ G G Sbjct: 474 STYIQCKDCGYVEECSHCSIKYSYYASQGVLKCNYCGRVKKYTGHCSKCGSSNLIHSGKG 533 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 E++E+ + F V + R+D + + + E+ + I++GTQ+++KG HFP+ Sbjct: 534 VERVEEEIKKYF-DVRVIRVDSEMSKDREFFEKMYFDFLEKKYDIMVGTQLISKGLHFPN 592 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +++ D L DFR+ E+ QL TQVAGRAGR K+G V++QT+ EHP+ + + Sbjct: 593 VTLVGVVNADTILNFPDFRAGEKTFQLVTQVAGRAGRGDKKGRVIVQTYQSEHPVFKRVK 652 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 Y+ F + + R +++ PP++ + + ++ F+Q I + + Sbjct: 653 ESDYEGFYSEEIGNRELLEYPPFSKTINIGISSKYEKYLENFVQDFYRDIKY-----DGV 707 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + GP+ ++ K R+R+ I ++ S + + I + K++ V+D+DPI Sbjct: 708 ELYGPMRSMVYKVKDRYRYNIFIKG-SIKEINNFKKKLKLKITNYEKNDKIRIVIDIDPI 766 Query: 731 E 731 Sbjct: 767 N 767 >UniRef50_C8WGN6 Primosomal protein N' n=6 Tax=Coriobacteriaceae RepID=C8WGN6_EGGLE Length = 780 Score = 705 bits (1819), Expect = 0.0, Method: Composition-based stats. Identities = 255/781 (32%), Positives = 364/781 (46%), Gaps = 57/781 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEG---MTVKAGCRVRVPFGKQQERIGIVVSVSDASE 54 M +A V L +P L + Y +PE ++ GC V VPFG +Q +G ++ + + +E Sbjct: 1 MKLASVILDIPTQALDAPYTYAVPEEAGDQPIEVGCAVLVPFGPRQA-VGFIIGIEERAE 59 Query: 55 ------LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL----- 103 L +LK +V + P F W ++ Y P+ + P Sbjct: 60 GDWPAGLDPAKLKGIVRAVSR-PYFDEEGAACAQWLSERYIAPLSSCVRLFTPPGGVPRM 118 Query: 104 -------LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA 156 R P W A + A A R + A Sbjct: 119 VRAQGGYWRLEEPTVGEVDDRWVVPGPALADFEPRKNAVKQASIAAALERGELRVAELTA 178 Query: 157 TLEFNDAALQALRKKGLCDLASET-------------PEFSDWRTNYAVSGERLRLNTEQ 203 + L+AL K+G+ + P + L Q Sbjct: 179 EFGAVSSPLKALEKQGVVRIEHRRRMRGMAEGSAGSAPSADSAAVPSFTPSPKPPLTRGQ 238 Query: 204 ATAVGAIH--SAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 A A+ AI + L+ GVTGSGKTEVYL +E LA G+ A V+VPEI LTPQT Sbjct: 239 ADALAAIDAARSRGAGEVVLVDGVTGSGKTEVYLQAIEETLAAGRTACVLVPEISLTPQT 298 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 +ARFR RF V V+HS ++ ER W ++G A +V+G RSALFTP NLG+IVIDE Sbjct: 299 VARFRGRFGDLVAVMHSRMSQGERYDQWDFIRSGAARVVVGARSALFTPLSNLGLIVIDE 358 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN-VQQKKYRLLRLTRR 380 EH+ SYKQ RYHARD+AV+ A ++LGSATP++E L + + + L R Sbjct: 359 EHEGSYKQDSAPRYHARDVAVWMARRAGAAVVLGSATPSIEALHACAKNPSWHQVSLPER 418 Query: 381 AGNARPAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 A V+D+ + ++ A L + + L A + +L LN+RGFA LLC Sbjct: 419 ANGKPLPEVQVVDMAKEFSGGSRSMFALPLARALEEELAAGRKAVLLLNQRGFAKFLLCR 478 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 +CG++ ECP C T H+ + L CHHC + P P CP CGS +L G GT+++E Sbjct: 479 ECGFVPECPSCSTSLTYHERGNFLICHHCGYRIPTPPVCPECGSPYLKKFGAGTQRVEAE 538 Query: 498 LAPLF-------PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 L L PGVPI R+D DTTS KGA ++ L E A +L+GTQM+AKG F D Sbjct: 539 LRVLLDEMPGVDPGVPIVRMDADTTSGKGAHQRLLEEFAAADAAVLLGTQMIAKGLDFED 598 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 VTLV +++ D L D+R++ER L QVAGRAGRA G V++QT+ + P ++ Sbjct: 599 VTLVGVINADTMLKLPDYRASERTFDLVEQVAGRAGRAELPGRVLVQTYEADAPAIRAAA 658 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL--ADE 668 F L +RR++ PP+ V + +L+ + + + Sbjct: 659 AYDRALFLRDELPKRRLLGYPPYVRMANVLVWSKDEPAVRRVAAELQAALEEAVRDFGGD 718 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 VL P + K G +RW I+++ P+ L + L L R +DVD Sbjct: 719 GWSVLPATPCVLAKLRGTYRWHIVVKCPADADLSDAL---LPLFRRRKPDRDANVAVDVD 775 Query: 729 P 729 P Sbjct: 776 P 776 >UniRef50_Q0K5N2 Primosomal protein N' n=76 Tax=Burkholderiales RepID=Q0K5N2_RALEH Length = 773 Score = 704 bits (1818), Expect = 0.0, Method: Composition-based stats. Identities = 291/749 (38%), Positives = 397/749 (53%), Gaps = 27/749 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V VAL P FDYL V G V VPFG++ +G+ V+ +D+S++P + L+ Sbjct: 29 VIRVALDTPADDCFDYLATPE--VAPGDLVVVPFGRRS-MVGVAVAYADSSDVPADRLRP 85 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR-----PAANAPMWY 117 V + L+ P L +AA YY +G+V+ ALP LR+ Y Sbjct: 86 VAQRLEWMPPLQPDWIGLAAFAARYYQRRLGEVMLPALPPALREAEGWPGLAQRARTDEY 145 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQ------GKIWRDQVATLEFNDAALQALRKK 171 +A+ R+ + AL + D A L + Sbjct: 146 RLLPGHAEALLAAVPPRARSVRALAQALAERAAAAEPLTLADARVLCAAAPARLAEWQAA 205 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKT 231 G + AS T L+ EQ AV AI A + F+ +LL GVTGSGKT Sbjct: 206 GWVE-ASRTARPLLPTDPAQPPSAAPPLHDEQRAAVQAIAEA-EGFAPFLLHGVTGSGKT 263 Query: 232 EVYLSVLENVLAQG--KQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSA 288 EVYL ++ +L + Q L++VPEI LTPQ AR RF P+ VLHSGL D ER Sbjct: 264 EVYLHAMQALLERDPQAQVLMLVPEINLTPQLQARIAARFPHLPLAVLHSGLADQERSLQ 323 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 WL A GEA IV+GTR A+ L +IV+DEEHD+SYKQQEG RY ARDLAV+RA Sbjct: 324 WLAAHRGEARIVLGTRMAVMASLPALALIVVDEEHDTSYKQQEGLRYSARDLAVWRAKQR 383 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQ-----AG 402 I ++LGSATP++ET Q YR L L RA A ++DL ++ + G Sbjct: 384 GIAVVLGSATPSMETWWRAGQGTYRKLVLRERAQAEATLPTVRLVDLNHERQRQRPLFEG 443 Query: 403 LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLR 462 L+ L+ + L Q +LFLNRRG+AP + C CGW++ CPRC Y LH+ + LR Sbjct: 444 LSVPLLEAIDARLARGEQSLLFLNRRGYAPVIACDSCGWLSGCPRCSAYLVLHRPERRLR 503 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CHHC + PVP CP CG+ + P+G GT+++E+ LA FP I+RID D+T RKG+ + Sbjct: 504 CHHCGLEAPVPHHCPDCGNVDIAPLGRGTQRIEEALATRFPQARIARIDADSTRRKGSAQ 563 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 EVH G IL+GTQM+AKGH F VTLV ++ D A+FS DFR+AE QVA Sbjct: 564 AMFDEVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDFRAAEHLFASLMQVA 623 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGRAG GEV++QT +P+ P LQ L YD FA L ERR LPP+ V+V A+ Sbjct: 624 GRAGRAGLPGEVLIQTRYPDTPALQALTRHDYDGFAASQLRERRQAGLPPFCYQVLVTAD 683 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 + A FL+ R + ++ + PVP + R R Q+L++ SR LQ Sbjct: 684 HGQLERALQFLEVARRHA-ETCELAAEVQLHDPVPMSMVRIFNRERAQMLVEATSRPVLQ 742 Query: 703 HIINGTLALINTI-PDSRKVKWVLDVDPI 730 + + + +++ V+W L++DP+ Sbjct: 743 RFVAEWVQTFADVGTEAKGVRWQLEIDPL 771 >UniRef50_C9RCL9 Primosomal protein N' n=1 Tax=Ammonifex degensii KC4 RepID=C9RCL9_AMMDK Length = 730 Score = 703 bits (1815), Expect = 0.0, Method: Composition-based stats. Identities = 265/738 (35%), Positives = 381/738 (51%), Gaps = 23/738 (3%) Query: 4 AHVALPVPLP---RTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 VA+ +PLP + Y LP + V G RV VPF + + +G+VV + + + Sbjct: 2 VQVAVALPLPPGKEVYSYRLPPQLAEKVIPGARVVVPF-RGRPVVGVVVELEEEIPEGVK 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ELK ++ V +++P + RL W A+ Y +G+ L + A Sbjct: 61 ELKPIIRVEEAKP-LPPKLLRLGEWLAERYLCSLGEALLALTAPPGEKEEYYFPAEDRDL 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 T + + + R+ + G + L AL +KGL Sbjct: 120 EETIEALSRRFPAQARALA----VVVAFPGIDRLSLLREAGVKAQTLDALWRKGLVRKEK 175 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLS 236 + + + A +G L L QA A+ + A + + LL GVTGSGKTEVYL Sbjct: 176 ASFKALPFPFTPAETG--LSLTPAQAKALSRVEEALNRKTPAVLLLHGVTGSGKTEVYLR 233 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 LAQG+Q +V+VPEI L Q + +FR RF V VLHS L + ER ++W + + GE Sbjct: 234 AASLTLAQGRQVIVLVPEIVLAYQLVEQFRSRFGDRVAVLHSALGERERGTSWQRVERGE 293 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A +VIG RSA+F P LG+IV+DEEH+ +YKQ++ RYHAR++A+ RA + ++LGS Sbjct: 294 APVVIGARSAVFAPVSRLGLIVLDEEHEPAYKQEQVPRYHAREVALARAAQDGAVVLLGS 353 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQ 413 ATP+LET Y LL L +R + ++DL+ + + + L+ R+++ Sbjct: 354 ATPSLETYARALAGHYELLELPQRVDGSPLPQVRLVDLREEYRRGMTGLFSRFLLKRIKE 413 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L+ QVILFLNRRGFA +LC CG I CP CD T +Q L CH+C + Sbjct: 414 KLRLGEQVILFLNRRGFAAFVLCRSCGRILRCPHCDIALTFYQPD-LLLCHYCHYRIRRQ 472 Query: 474 RQ-CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 + CP CG L G GT++LE + LFP ++R+D +TTSR+G+ E L+ V R Sbjct: 473 KLFCPYCGKGELELYGAGTQRLEAEVKSLFPEARVARLDAETTSRRGSHEAILSAVARRE 532 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 ILIGTQM+AKG P VTLV +++ D L DFR+AER QL QVAGRAGR G G Sbjct: 533 VDILIGTQMVAKGLDLPGVTLVGVVNADVTLTLPDFRAAERTFQLLYQVAGRAGRGGTPG 592 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 EVV+Q+H PEH + + + FA + LA RR + PP++ V Sbjct: 593 EVVIQSHCPEHYAIYLSARQDFSTFARRELALRRRFEYPPFSHLARVVFTGAAENKVRER 652 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + R L+L+ A E++ VLGP P K G WRW I+L+ L+ I+ T+ Sbjct: 653 ALRFRELLLAE--AGEEITVLGPAPCPLGKLKGFWRWHIILKGRKAKPLREILRETVEQ- 709 Query: 713 NTIPDSRKVKWVLDVDPI 730 +VK LD+DP+ Sbjct: 710 AKRKAGAEVKIALDIDPL 727 >UniRef50_C6JQJ7 Primosomal protein N n=7 Tax=Fusobacterium RepID=C6JQJ7_FUSVA Length = 773 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 213/785 (27%), Positives = 372/785 (47%), Gaps = 68/785 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + YL E + G RV V F + +++ G++++ D SE ++ Sbjct: 1 MRYFKIYVD-NTQSLYTYL-DENEEYEIGDRVVVSF-RNRDKSGLIIA-EDNSENITFKV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 + L++E + + +LL W YY V+ A+P L+ + Sbjct: 57 LPIKSRLENEIKLSENFIKLLRWIKTYYMSSYEQVISAAVPSDLKVKYDSVYVLSDIKNI 116 Query: 121 TEQGQAVDLNS------------------------------------------------- 131 + + Sbjct: 117 FKDEAEKIYSKEFIDFFKDRITITKATLNKKFTKEIINEMIADTILFNEKGSVKLNYDFD 176 Query: 132 -LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRT-- 188 K + A+ ++ + + + +F+ + L ++ L L E + R Sbjct: 177 FSNLKEKFEDAVVYFQKKEEVQKKNLESKFSKELINKLIREKLLILKKNIKEDENQREIH 236 Query: 189 --NYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK 246 + VS + + LN EQ A I + + + +LL G+TGSGKTEVY+ +++ GK Sbjct: 237 EISEEVSEKNVVLNEEQEKAKEIIKNGDNKY--YLLKGITGSGKTEVYIELIKEAFKNGK 294 Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 ++ +VPEI LTPQ I RFR F + +LHS L + ER W +G IV+G RSA Sbjct: 295 GSIFLVPEISLTPQMINRFRNEFRENIAILHSRLTNRERADEWYNIYSGNKKIVLGVRSA 354 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 +F P +NL I++DEEH+++YKQ RY+A+ +A+ R E +ILGSATP++E+ Sbjct: 355 IFAPVENLEYIILDEEHETTYKQDSNPRYNAKYVAIKRTELEGAKLILGSATPSIESSYY 414 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLN 426 ++ Y L+ + R N+ ++D+K ++ + L+ ++ L QVIL LN Sbjct: 415 AEKGIYTLVTMDSRYNNSILPEIEIVDMKKEE-DLYFSKKLLDEIKITLLKGEQVILLLN 473 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 R+G++ + C DCG + EC C + + +Q L+C++C R C CGST+L+ Sbjct: 474 RKGYSTYIQCKDCGHVEECTHCSIKSSYYASQGILKCNYCGQTRKYTGHCSKCGSTNLLH 533 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G G E++E+ + F V I R+D +++ K E+ + I+IGTQM++KG Sbjct: 534 SGKGVERVEEEIKKYF-DVRIIRVDSESSKNKDFYEKMYFDFLDKKYDIMIGTQMISKGL 592 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 HFP+VTLV +++ D L DFR+ E+ QL TQV+GRAGR K+G+V++QT+ PE+ Sbjct: 593 HFPNVTLVGVINADTILNFPDFRAGEKTFQLVTQVSGRAGRGEKKGKVIVQTYQPENYTF 652 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA 666 + + Y+ F + ++ R +++ PP++ + + + +F+++ I Sbjct: 653 RAIEKSDYNKFYSEEISNRELLEYPPFSKTINIGISSRKEKELEIFVKEFFKNIE----- 707 Query: 667 DEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 DE + + GP+ +L + R+R+ I ++ S+ + + S + V+D Sbjct: 708 DENVEMYGPMRSLVYRVKDRFRYNIFIKG-SKKNISIFKRKLNKKLTDYKKSDDFRIVVD 766 Query: 727 VDPIE 731 VDPI Sbjct: 767 VDPIN 771 >UniRef50_B7CB39 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CB39_9FIRM Length = 697 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 230/721 (31%), Positives = 351/721 (48%), Gaps = 41/721 (5%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEP 71 L TF Y V+ GCRVRV F + +G V + S+ +K V+EV+D +P Sbjct: 12 LRNTFTYSC--EQDVEVGCRVRVEF-NNRTLVGFVEEIDVESDFK--NIKPVIEVIDEKP 66 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNS 131 + + + L + AD+Y LP LR + + ++ Sbjct: 67 LLNNELKLLANYMADFYASSKVTCYKTMLPPALRPSSKHSKIIYEDYAVLKESNET---- 122 Query: 132 LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYA 191 + +Q++ L + + + + + L +KG + + + + A Sbjct: 123 --LTSRQKEVLEMFSYPCKMSEL---RKVSPSITKVLLEKGYIGIEKRIKDSNTHVSEIA 177 Query: 192 VSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVM 251 L EQ A+ I S LL GVTGSGKTEV+L + ENVL+ GKQ L + Sbjct: 178 DVM--HSLTIEQKNAISKITST--EKMVSLLHGVTGSGKTEVFLRLAENVLSCGKQVLFL 233 Query: 252 VPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPF 311 VPEIGLTP I R + RF + + HSGLN E+L + K+ + IV+GTRSA F PF Sbjct: 234 VPEIGLTPMMIQRVQARFKQKIAIYHSGLNAQEKLEQYNLVKDHKVDIVVGTRSACFMPF 293 Query: 312 KNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 +LG+I++DEEHDSSYKQ RYH RD+ ++RA + +IL SATP+LE+ + Sbjct: 294 SSLGLILMDEEHDSSYKQDNTPRYHTRDIVLFRASYHKCKVILASATPSLESYARAYKNV 353 Query: 372 YRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 Y L+ L R ++D+K +++ GL+ L+ + + L QVIL LNRRG+ Sbjct: 354 YELIELKNRIHE--MPEICLVDMKKERITNGLSETLLQAIHKRLSKKEQVILLLNRRGYL 411 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 P + C DCG + CP C T H+ Q+ L CH C Q +CPSC S + G+GT Sbjct: 412 PVVRCSDCGHVRICPDCGVALTYHKNQNALVCHCCGRQFKFMEECPSCHSKNYFKAGMGT 471 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E+LE+ + +F + R+D D+T +K A E+ L E G +LIGTQM+AKG F V Sbjct: 472 ERLEEQIVEIFKDHHVVRMDADSTRKKNAHEKLLQEFEESG-DLLIGTQMVAKGLDFERV 530 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV +L+ D L D+R++E ++ Q +GR+GR +GEV++QT P+H ++Q + Sbjct: 531 TLVGILNADATLCRNDYRASETAYEMLEQASGRSGRGKLKGEVMIQTFDPDHFVMQCVKM 590 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW 671 Y F Q + R + PP+ + + A + L Sbjct: 591 HDYKRFFNQEMQYRHLGMYPPYVYLCTLIFTHFDFNEAYKQASAAKEYF-------SSLR 643 Query: 672 VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD--P 729 VLGP+ + + R +++L+ L ++ L ++DV+ P Sbjct: 644 VLGPIE--IRMQQKKHRVRLILKSKDDKLLHELVQNYLDETKQ---------IVDVNMHP 692 Query: 730 I 730 I Sbjct: 693 I 693 >UniRef50_C7RHM6 Primosomal protein N' n=4 Tax=Anaerococcus RepID=C7RHM6_ANAPD Length = 790 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 223/794 (28%), Positives = 379/794 (47%), Gaps = 72/794 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQ-QERIGIVVSVSDASELP 56 A V L L R+F Y +P+ + + RV VPFG + + + + D + Sbjct: 2 FAKVILDTNSRFLDRSFTYKVPDRLVDDISIARRVLVPFGGGNKTYVAFIYELVDDLDSD 61 Query: 57 LN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLF-HALPILL---------- 104 +N ++K +++++D + ++ + L + + Y PI L P + Sbjct: 62 INFKIKEIIDLIDDRKLISNELMDLAFFMSKRYISPIQAGLKQVMPPTKIKDIHVYYQNV 121 Query: 105 --------------RQGRPAANAPMWYWFATEQGQAVDLNSL------------------ 132 R+ + A Y + + Sbjct: 122 SELSNDFLDYLKEKREIKDIARKFSDYRGKLDYYLQEKIVKETFDVKSSQKISYDEYADL 181 Query: 133 ---------KRSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDLASETP 181 R+ KQ + + L++ I ++ +A + ++L AL K + + + Sbjct: 182 TKMNEEKINSRAHKQIEIVNYLKENGITEVKELLANTKAGKSSLNALISKSIISITKKEK 241 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 E ++ + LN EQ A I++ +LL GVTGSGKTE++L ++E V Sbjct: 242 EKE--ISDLYRKYNKFTLNDEQQKAYDTINND--RKGHFLLYGVTGSGKTEIFLQMVEKV 297 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 +++GK+A+++VPEI LTPQTI RF+ RFN + ++HS L ER + W NGE IVI Sbjct: 298 ISEGKEAIILVPEISLTPQTIERFKGRFNEKIAIMHSRLTPKERFNQWRMINNGEVKIVI 357 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSA+F PF+NLG+I+IDEEHD SY + +YH ++A+ RA + +IL +ATP++ Sbjct: 358 GARSAIFAPFRNLGIIIIDEEHDQSYVSSQDPKYHTDEIAIERARAHSCNLILATATPSI 417 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA---PALITRMRQHLQAD 418 ++ V++ + L++L R N ++D++ + ++ + L + +L+ Sbjct: 418 RSMARVEEGDFELIKLNNRVNN-HMPSIDIVDMREELKESNFSMISKKLYREIENNLKNS 476 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLN+ G C CG + +C CD T H+ L CH+C + R CP Sbjct: 477 EQTILFLNKVGHDSFTFCRSCGHVIKCEACDVAMTYHKNVDKLVCHYCGRTKNQVRICPV 536 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C S + G GTE+LE+ + FP I R+D T + K E ++ IL+G Sbjct: 537 CHSKKIKEFGAGTEKLEEEVRNFFPNANILRMDSMTATNKNLYEMMYRDMKNNKIDILLG 596 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG F +V+LV ++ D +L DF++ E QL TQV+GRAGR +G V++QT Sbjct: 597 TQMIAKGLDFKNVSLVGIISADLSLNVGDFKANETTFQLLTQVSGRAGRDKIKGRVIIQT 656 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + P++ ++Q Y+AF E L RR PP+ + + +R + + A ++L Sbjct: 657 YRPDNFVIQAAKNNDYEAFYENELKLRRAFNYPPYKNILTIRVVNESRLRAVDISKKLYK 716 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLA-LINTIPD 717 I S L + + ++GP P + ++R+ IL++ L ++I+ I I Sbjct: 717 DI-SKLLNNTSIELIGPNPCKIARINNKFRYNILIKVDD-DGLNNVIDIINRLRIKYINK 774 Query: 718 SRKVKWVLDVDPIE 731 + ++ ++P Sbjct: 775 YKDTSFIPALNPTN 788 >UniRef50_O84783 Primosomal protein N' n=13 Tax=Chlamydiaceae RepID=PRIA_CHLTR Length = 753 Score = 702 bits (1811), Expect = 0.0, Method: Composition-based stats. Identities = 237/746 (31%), Positives = 371/746 (49%), Gaps = 25/746 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQ----QERIGIVVSVSDASELP 56 A V + + + DY +P + V G V+VP ++ + +I IV+ + +S+ Sbjct: 11 YAEVIVNANINKILDYGIPAELENLVTVGSVVKVPLQRKLTNDKYKIAIVLKIKSSSDF- 69 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 ++ ++ ++++ + L+ W + YY P+G + LP + Q + Sbjct: 70 VHVIQPILDISYEGITLPQDLIDLIFWISQYYFCPLGSAVSLFLPTVYAQTHSTKHQNNV 129 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAA---LRQGKIWRDQVATLEFNDAALQALRKKGL 173 + + L +L +P+Q L + + + E + L AL K+ Sbjct: 130 FLGQNAERTQEILKTLD-NPQQIAVLRKLLKTTKPLTPPELMRKTEVSAKTLDALVKQKF 188 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKT 231 + + + LN EQ AV I + + F LL GVTGSGKT Sbjct: 189 IRIVDSADLEIQDEQLHYFLPDPPTLNQEQLDAVNTISQSLVAEQFQTCLLFGVTGSGKT 248 Query: 232 EVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLK 291 EVYL V+ A GK +++VPE+ LT QT++ F+ F + V VLH L+DSER W K Sbjct: 249 EVYLQVIRKARALGKSVILLVPEVALTIQTLSFFKMHFGSEVGVLHYKLSDSERTQTWYK 308 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQI 350 A G I+IG RSA+F P +NLG+I++DEEHDS+YKQ + Y ARD+AV R Sbjct: 309 ASRGLINIIIGPRSAIFCPIQNLGLIIVDEEHDSAYKQSDLPPFYQARDVAVMRGKMTNA 368 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPA 406 +ILGSATP+LE+ N KKY L L++RA + P ++D+ + + + Sbjct: 369 TVILGSATPSLESYTNALSKKYTLSVLSKRASTSTPTKVFLIDMNLEMEKTRKKPFFSQT 428 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 +I + Q L+ Q I+F NRRGF + C C + +CP CD T H+ + L CH C Sbjct: 429 VIRSIEQRLEVGEQTIIFFNRRGFHTNVSCSSCKYTLKCPHCDMILTFHKTERILLCHLC 488 Query: 467 DSQRPVP-RQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 +++ P CP C G+ L G GTE++E L FP R+D DTT +G+ + Sbjct: 489 NTRLSKPITSCPQCLGTMTLQYRGAGTEKIETLLREFFPTARTIRLDSDTTRFRGSHDAL 548 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 + + G A ILIGTQM+AKG HFP VTL +L D L+ DFR+AE+ QL TQV GR Sbjct: 549 VKQFATGKADILIGTQMIAKGMHFPAVTLSVVLSGDSGLYIPDFRAAEQVFQLITQVTGR 608 Query: 585 AGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH 644 +GR+ GEV++QT P++ + L + + AF ++ + R++ PP+T + Sbjct: 609 SGRSHLPGEVLIQTFLPQNSTISHALAQDFPAFYKEEILGRKVCNYPPFTRLIRCIFLGK 668 Query: 645 NNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 + + Q++ LI + + L + P K + +Q L++ + + Sbjct: 669 CSDYTLKETQRVHTLIKQNLDSQASLMEI--SPCGHFKVKDLFHYQFLIKTRNILVANKQ 726 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 I LA S KV+ ++DVDP+ Sbjct: 727 IQEALA---AAKLSSKVRCIVDVDPV 749 >UniRef50_C1F1L0 Primosomal protein N' n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F1L0_ACIC5 Length = 825 Score = 701 bits (1809), Expect = 0.0, Method: Composition-based stats. Identities = 251/827 (30%), Positives = 380/827 (45%), Gaps = 106/827 (12%) Query: 1 MP-VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 MP VALPVPL R F Y + G RV VPF + ++ GIV+ + D + P E Sbjct: 1 MPAFCDVALPVPLDRAFTYSTGL-FAPEVGARVLVPF-RNEKLSGIVLRLHD--DPPPVE 56 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP--ILLRQGRPAANAPMWY 117 K ++ V+D + + + + L W A YY PIG+VL LP +R+ Sbjct: 57 AKPLLAVMDEQSILSPQLLDLARWIAQYYVAPIGEVLRAMLPLIAEVRRHVLYRITDTGR 116 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA------TLEFNDAALQALRKK 171 Q + +Q A+ D + L+ + +K Sbjct: 117 EALFAGAQQGSSRRSRLPAAEQDREYAVLNYLESGDPARVSAIRSKTGASIDLLRGMLRK 176 Query: 172 GL--------CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGA-------------- 209 A T + + RLN Q T + A Sbjct: 177 KWLARETAAETRTAQRTMRVARLAQSLDGEARLPRLNENQQTILAALAGIDGGVPVAQLR 236 Query: 210 ----------------IHSAADTFSAWLLAG---------------------VTGS---- 228 + + + +L++G +TGS Sbjct: 237 ELDVPDSTLGTLVRRGLVAIEERPVDFLMSGLSIRHHGEHKLIEAQQQALAQITGSVEEG 296 Query: 229 -------------GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEV 275 GKT VYL+ + + L +GK ++++VPEIGLTPQ A+ F + V + Sbjct: 297 GFRPYLLHGVTGSGKTAVYLAAMRHALERGKSSILLVPEIGLTPQMAAQLHRAFGSEVAL 356 Query: 276 LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRY 335 LHS L ER W + + EA +V+GTRSA+F P ++LG+I++DEEHD SYKQ+ RY Sbjct: 357 LHSALLPEERAEQWHRIRRREARVVVGTRSAIFAPVEDLGLILVDEEHDGSYKQESVPRY 416 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 HARD+AV RA ++LGSATP+LE+ N + KY + + R ++D++ Sbjct: 417 HARDVAVMRAKLAGATVVLGSATPSLESWNNAIEGKYTRIEMHERIHQRPMPEVELVDMR 476 Query: 396 GQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + + G + LI + + L Q I+ LNRRG++ +LC CG +C C Sbjct: 477 REFQETGAEHLFSRTLIDQTQATLDRGEQAIVLLNRRGYSFVVLCRACGEKLQCENCSIS 536 Query: 452 YTLHQA----------QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPL 501 T H+A L CH+C +R +P++CP C S HL +G G++Q E+ L + Sbjct: 537 LTYHKAVTDAEAHAPVGQRLECHYCGYKRTIPQRCPKCDSEHLYFLGAGSQQGEERLQEI 596 Query: 502 FPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDG 561 FPG I R+DRDT +G LE+ LA++H G +L+GTQM+AKGH VTLV ++ D Sbjct: 597 FPGARIGRMDRDTVRGRGDLERLLAKLHSGEINLLVGTQMIAKGHDIHGVTLVGVVGADH 656 Query: 562 ALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQA 621 AL DFR+AER QL TQVAGRAGR G+V++QT++PEH ++ + +FAE+ Sbjct: 657 ALGLPDFRAAERTFQLLTQVAGRAGRGELPGKVIVQTYYPEHYAVECARQHDFHSFAERE 716 Query: 622 LAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAP 681 L RR M+ PP+ + V + + + L + ++ + VLGP A Sbjct: 717 LKYRRWMRYPPYAAITNVLLQSEDFGQLAHWAAALGRWLSAAEFP--DVRVLGPATAPIA 774 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + R +LL+ SR LQ ++ + + ++DVD Sbjct: 775 RIKRMHRMHLLLKSQSRQSLQRVLRLLRHHAEEVGIPPR-NLIIDVD 820 >UniRef50_B0TGS7 Primosomal protein n' n=2 Tax=Heliobacteriaceae RepID=B0TGS7_HELMI Length = 789 Score = 700 bits (1806), Expect = 0.0, Method: Composition-based stats. Identities = 245/746 (32%), Positives = 361/746 (48%), Gaps = 53/746 (7%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A V + +P L R F Y +PE + V+ G V V F + R ++ +EL Sbjct: 9 LAQVIVDIPHRDLDRVFHYRIPETLAGEVEPGREVWVAFHGKLTRGWVLELEVATAELER 68 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI--------LLRQGRP 109 VE ++ H + L+ W A DVL P + Sbjct: 69 AFALQPVEAVNGSYRLGHDLLALVPWLARETLGTKADVLRLMAPPGPPVRPAAWVLLAAK 128 Query: 110 AANAPMWYWFATEQGQAVDLNSLKRSPKQQQAL----------------AALRQGKIWRD 153 + +W + A L L R+P+++ G + Sbjct: 129 PDREAIAFWEGIDPECADLLRRLSRAPQRRMKYASLTGKGGGVPPAVIDRLSDAGLVTVR 188 Query: 154 QVATLEFNDAALQALRKKGLCDLASETPEFSDWR----TNYAVSGERLRLNTEQATAVGA 209 Q+ A ++ R+K P + L +Q AV Sbjct: 189 QLLPKLAERATMERAREKAHQTETIADPAAKPASITNSSALPPLFPEPALTPDQKQAVHY 248 Query: 210 IHSAADTF------SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIA 263 + A D +LL GVTGSGKTEVY+ + LA+G+QAL++VPEI LTPQT Sbjct: 249 LTEALDAAGRGGDSRPFLLHGVTGSGKTEVYICAIREALARGRQALLLVPEIALTPQTER 308 Query: 264 RFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 R RERF + V +LHSGL D+ R W + GEA +V+G RSA+F P LG+I++DEEH Sbjct: 309 RLRERFGSQVALLHSGLADAARRQEWQRIYRGEADLVVGARSAVFAPLPRLGLIIVDEEH 368 Query: 324 DSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN 383 + SY+Q +YHAR+ A+ RA ++ GSATPALET +++LL+L +R Sbjct: 369 EPSYRQDNDLKYHARETAMERARHCGAVVVFGSATPALETYAQALSGRFQLLKLRQRPAG 428 Query: 384 ARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 + V+D++ + L+ L+ + + LQ QVIL+LNRRGF+ ++C +CG Sbjct: 429 GQLPPVDVIDMRDELAAGNKGMLSRYLLKAVEERLQRRQQVILYLNRRGFSTFVICRECG 488 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 + CP C H+ L CH+C+ ++ VP +CP C S + G GT+++E+ L Sbjct: 489 TVVTCPHCSISLVYHRHGEQLHCHYCNFRQDVPERCPHCRSRAIRYFGTGTQRIEEELRA 548 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 FPGVP+ R+DRD +++G + L RG A IL+GTQM+AKG FP VTLV +L D Sbjct: 549 RFPGVPVLRMDRDVAAQEG-IAPVLDAFGRGEAPILVGTQMIAKGLDFPRVTLVGVLAAD 607 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 +L +DFR+AER QL +QVAGRAGRA + G+VVLQT+ PEH LQ + Y+ F + Sbjct: 608 ASLHISDFRAAERTFQLLSQVAGRAGRAREPGQVVLQTYCPEHYCLQAVQLHDYEGFFRR 667 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL----------SSPLADEKL 670 + R+ + PP+ V + ++ SS LA ++ Sbjct: 668 EIELRQQLGYPPFARLARVLFSGPEEPLVRVAADTWAEILRQQAGAVTMGLSSGLAQPEI 727 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHP 696 V GP PA K R+RW + L+ Sbjct: 728 DVWGPAPAPVAKVENRFRWLLTLRVK 753 >UniRef50_B0S138 Primosomal protein N n=2 Tax=Finegoldia magna RepID=B0S138_FINM2 Length = 789 Score = 698 bits (1802), Expect = 0.0, Method: Composition-based stats. Identities = 224/781 (28%), Positives = 375/781 (48%), Gaps = 72/781 (9%) Query: 13 PRTFDYLLPEGMTVKAGCRVRVPFGKQQE-RIGIVVSVSDASELPLNELKAVVEVLDSEP 71 R + Y V+ G RV VPFGK ++ +VV V++ ++ K ++ V+D P Sbjct: 15 NRLYSY--HSNEEVEVGMRVIVPFGKSNINKLALVVRVNENPNQDID-YKEIISVVDLNP 71 Query: 72 VFTHSVWRLLLWAADYYHHPIGDV------------LFHALPILLRQGRPAANAPMWYWF 119 + T + + D Y L + + Sbjct: 72 IVTQESIDIAFFMIDKYLSDYSSAFQTILPPGNFEELKEYFVANDKLNNVDEDLYNILKT 131 Query: 120 ATEQGQAVDLNSL------------------------------------------KRSPK 137 E + +++ + KR+ Sbjct: 132 KKEYSEIKEISDISHKKLMEYVKFGLLKMDLVYDQKISPKLLKYVKLIDNNPVISKRANA 191 Query: 138 QQQALA--ALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 QQ+ + ++ + +A + ++AL +K + + + + + S Sbjct: 192 QQKIVDMLKKESNILYSELLAKTNTTSSVVKALEEKKVVKIYFKEVDR--IVVDDTKSYH 249 Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 ++ LN++Q A +I + F+ LL GVTGSGKTEVYL ++E +L +GK ++V+VPEI Sbjct: 250 KISLNSQQENAYNSILE--NQFN--LLHGVTGSGKTEVYLHLVEKMLNEGKDSIVLVPEI 305 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 LTPQTI RF RF V ++HS LN +E+ + K NGE IV+G RSA+F+PFKNLG Sbjct: 306 SLTPQTIERFEGRFPGKVAIIHSKLNINEKFEQFRKMYNGEYKIVVGARSAVFSPFKNLG 365 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I+IDEEH++SY ++ +Y+A D++ +RA ++LGSATP +E N + +Y L+ Sbjct: 366 LIIIDEEHETSYVSEKNPKYNAIDISRFRAEYNNAKLLLGSATPGVEEYNNALKGQYNLI 425 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAP 432 + +RA N P ++D++ + + L+ +++++L Q ILFLN+RG Sbjct: 426 EMNKRANNTTPVDCTIVDMRKELETGNMRMFSKVLLNKIQENLNNKKQTILFLNKRGHTS 485 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C CG++ +C CD T H+ ++ L CH C P+ CP+CGS + G GT+ Sbjct: 486 FISCRRCGYVLKCDSCDVSMTYHKTKNRLICHMCGRTALKPKVCPNCGSKFIKEFGAGTQ 545 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 +LE+ LFP I R+DRDTT+ K E+ ++ ILIGTQML+KG FP+VT Sbjct: 546 KLEEETRELFPDARIVRMDRDTTNTKKDYEKIYDMMNNQEIDILIGTQMLSKGFDFPNVT 605 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV ++ D +L D++S E+ QL TQVAGRAGRA +G+V++QT+ P++ + + Sbjct: 606 LVGVMAADISLNLGDYKSNEKTFQLITQVAGRAGRAEYEGDVIIQTYKPDNFAITSAALH 665 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS--SPLADEKL 670 Y F E+ + R+ PP+ + + N A + ++ N + + Sbjct: 666 DYKMFYEKEIKLRKSFNYPPFYRILNINISSRNRNVAMKKINEVSNYVAALIRRYKLSTT 725 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVR-LQHIINGTLALINTIPDSRKVKWVLDVDP 729 + GP P+ + +R+ + + P+ + II L + + + +DP Sbjct: 726 LINGPHPSPIERINNMYRFDLYYKFPNGDDKIIEIIKKVLINNEYNINLEGITLKITLDP 785 Query: 730 I 730 Sbjct: 786 Q 786 >UniRef50_B8I253 Primosomal protein N' n=6 Tax=Clostridium RepID=B8I253_CLOCE Length = 818 Score = 694 bits (1792), Expect = 0.0, Method: Composition-based stats. Identities = 187/581 (32%), Positives = 304/581 (52%), Gaps = 7/581 (1%) Query: 156 ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD 215 + L L K G S + + + E L +QA + + D Sbjct: 238 RFAGVTASVLNTLSKHGYISYKSLEIKRNPLKDKQYAKTEPLPPTEDQANTLMFLKKQLD 297 Query: 216 T--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 + F LL G+TGSGKTEVYL ++ + GK+A+++VPEI LTPQ + RF RF V Sbjct: 298 SRTFQETLLHGITGSGKTEVYLQLISHCFELGKKAILLVPEISLTPQMVERFVSRFGNRV 357 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 V+HS L+ ER W ++G+ +V+G RSA+F P +NLG+IVIDEEH+SSYK + Sbjct: 358 AVIHSKLSLGERFDQWKLIRDGKVDVVVGARSAVFAPVENLGLIVIDEEHESSYKSESLP 417 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 RY+A+++A R ++ GSATP++ET N + K +LL + R A ++D Sbjct: 418 RYNAKEVAQKRCEINDCLLVYGSATPSIETYYNTETGKIQLLEMKNRPKTAILPKVELVD 477 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 ++ + + L+ ++++ + + Q ILFLNRRGF+ ++C DCG+ +CP C Sbjct: 478 MRLELENGNKTPFSSRLVEELQKNRENNQQSILFLNRRGFSTFVICRDCGYTMKCPDCSI 537 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 T H L CH+C P CPSC S ++ G+GT+++E+ ++ L + R+ Sbjct: 538 ALTYHSKTKRLICHYCGFTVQNPSTCPSCKSENIRYFGIGTQKIEEEVSKLITEASVIRM 597 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DT K A E+ L I++GTQM+AKGH FP+VTLV +L DG L + D+R+ Sbjct: 598 DMDTVGYKNAHEEILNRFKNENINIMVGTQMIAKGHDFPNVTLVGVLAADGMLNTGDYRA 657 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 +ER QL TQV+GRAGR G V++QT++ + + + F Q + R+ + Sbjct: 658 SERTFQLLTQVSGRAGRGDIGGRVIIQTYNTDEYSIIAACNHDFCRFYRQEIMIRKRLDY 717 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQ 690 PP+T+ ++ ++ + ++ L+ + + +LGP + PK ++RW+ Sbjct: 718 PPFTNIAVITFTGIRDRGVFEASKSIKPLLSK--VCPKDTLILGPSRSPIPKIASKYRWR 775 Query: 691 ILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++++ L + T + V +D++P Sbjct: 776 LVIKEKDVELLIDRLTETADKFWRNNKDKDVSMSIDINPYN 816 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 9/113 (7%) Query: 1 MPV--AHVALP---VPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQ-ERIGIVVSVSDA 52 M V V L + + Y +PE ++ + GCRV VPFG + + G V+ + Sbjct: 1 MKVTTVSVVLSNTTRAFDKKYTYSVPEKLSEQVFRGCRVLVPFGNGELIKEGFVMETNPL 60 Query: 53 S-ELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL 104 E K + E+L+ P+ T+ +LL W Y D++ LP + Sbjct: 61 VFEEKPITYKEIKEILEPYPLLTNDSIQLLDWMKRRYICTYFDIIKCMLPPGI 113 >UniRef50_Q3ZZA8 Primosomal protein N' n=5 Tax=Dehalococcoides RepID=Q3ZZA8_DEHSC Length = 815 Score = 693 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 251/826 (30%), Positives = 365/826 (44%), Gaps = 112/826 (13%) Query: 1 MPVAHVALPVPLPRT--FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A +A+ P+ R F Y +P G+ +K G V PFG + GIV+ VSD Sbjct: 1 MAFAELAVNTPVLRPGSFSYSIPLGLEIKPGQAVWAPFGP-KIVQGIVLEVSDQP--AFG 57 Query: 59 ELKAVVEV-----------------------------------------------LDSEP 71 + + + V L+ P Sbjct: 58 QTREICGVISDTPLLSFHQLNLAAWISQTYLCSIYEALSPMLPPSFERRSVAYISLEPSP 117 Query: 72 V---------FTHSVWRLLLWAADYYHHPIGD-------------VLFHALPILLRQGRP 109 + + S+ ++ W P + +L L+ + Sbjct: 118 LNKSEKPPATLSPSLQKIFDWLQTRDITPQTELENIFGKKTTQTAILKLINQGLINRTYQ 177 Query: 110 AANAPMWYWFATEQGQA-------VDLNSLKRSPKQQQ---ALAALRQGKIWRDQVATLE 159 + F G + D K SP+Q + L QG ++ Sbjct: 178 ISPVRTQTKFEKHFGLSEQALAFIKDQTLPKLSPRQTEVFECLRENPQGISKSRLNLLVK 237 Query: 160 FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA----- 214 N A L+AL KK L ++ + L+L+ Q + +I+ + Sbjct: 238 NNAAILKALEKKELILTEEHQVFRQPIDYSHIETLPHLKLSPPQEKCLESINRSLNTPPE 297 Query: 215 --DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP 272 +LL G+TGSGKTE+YL L L GK+A+V+VPEI LTPQTIARF RF Sbjct: 298 DDQNPRTFLLHGITGSGKTEIYLQALAEALRLGKKAIVLVPEISLTPQTIARFAGRFPGR 357 Query: 273 VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE- 331 V VLHS L+ E+ W + KNG+A IVIG RSALF P G+I+IDEEH+ +YKQQ Sbjct: 358 VAVLHSRLSPGEQFDEWQRIKNGQADIVIGPRSALFAPLDKPGIIIIDEEHEWTYKQQNP 417 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR---AGNARPAI 388 RYH R +A+ ++LGSATP +++ Q Y+LL L R A Sbjct: 418 QPRYHTRTVALKMTEEYGAVLVLGSATPDIDSYFKAQNGLYQLLELPERLTPYRGASLPK 477 Query: 389 QHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 ++D++ + + + L + + L Q ILF+NRRG A + C DCG++A C Sbjct: 478 TELVDMRTELSEGNRSIFSRNLHASIEKVLAKHEQAILFINRRGGASFIQCRDCGYVAMC 537 Query: 446 PRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGV 505 CD T H Q +L CH C P P CP+C S + +G+GT++LE+ FP Sbjct: 538 KSCDTPLTYHPDQENLVCHQCGRHYPNPLTCPNCKSRRIKYLGMGTQKLEEETGLAFPQA 597 Query: 506 PISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFS 565 + R D D T K + +Q + + R A ILIGTQM+AKG P VTLV +++ D +L Sbjct: 598 KLLRWDSDVTKGKDSHQQIMDKFSRHQADILIGTQMVAKGLDLPGVTLVGVINADISLNL 657 Query: 566 ADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAER 625 DFR+ ER QL QVAGRAGR G+VV+QT+ PE+ +Q+ + Y F + +A R Sbjct: 658 PDFRAGERTFQLLAQVAGRAGRGLAGGKVVIQTYTPENYAIQSAVCHDYPGFYAKEIAYR 717 Query: 626 RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP--LADEKLWVLGPVPALAPKR 683 R + PP+ + N+ L + L +LGP PA + Sbjct: 718 RELNNPPFQKLACLVFSHLNHDFCQQQAILLAQTLREKADSAGSGTLEILGPAPAFIQRL 777 Query: 684 GGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 GR+R+QI+L+ P+ IN W +D+DP Sbjct: 778 RGRYRYQIILRSPNPANFLRDINLGQG------------WSIDIDP 811 >UniRef50_C7MNQ4 Primosomal protein N' n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MNQ4_CRYCD Length = 786 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 239/779 (30%), Positives = 367/779 (47%), Gaps = 55/779 (7%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVV--------- 47 M A V L +P L ++ Y + ++ G V VPFG + +G V+ Sbjct: 9 MKFAQVVLDIPTQALEGSYVYAAHSDLGDIEVGSPVLVPFGGRSA-VGFVMKMLSLDELA 67 Query: 48 --SVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLR 105 +V +A +++K + +L +F + A +Y P+ + P Sbjct: 68 PEAVEEALGCDSHKVKPITRLL-GRSLFPRESAACAQFLAQHYIAPLASCVRLFTPPGGV 126 Query: 106 QGRPAANAPMW----------YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV 155 + + A + + K++ KQ+ +AAL G++ + Sbjct: 127 PRMVHGRDGWYLRDASVGKVDDRWVRLAVGAREFHPRKQAVKQRAIIAALDAGELRVADL 186 Query: 156 ATLEFN-DAALQALRKKGLCDLASETPEFSDWRTNYAVSG-----------ERLRLNTEQ 203 + A L++L KG+ ++ S +N SG + L Q Sbjct: 187 RAEYGSVSATLRSLATKGVIEIFSRRRMRGTSVSNTPTSGCDYGLCTLDAAHKPHLTPGQ 246 Query: 204 ATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQT 261 AV AI A S L+ GVTGSGKTEVYL +E V+ G+ A+V+VPEI LTPQT Sbjct: 247 QRAVAAISKAFQAHSGQVVLVDGVTGSGKTEVYLRAIEEVVRSGRSAIVLVPEISLTPQT 306 Query: 262 IARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDE 321 +ARFR RF V VLHS + ER W ++GEA +++G RSALF P +LG+IVIDE Sbjct: 307 VARFRGRFGDMVAVLHSRMGTGERFDQWDFIRSGEARVIVGARSALFAPVADLGLIVIDE 366 Query: 322 EHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK-YRLLRLTRR 380 EH++SYKQ RY RD+A + A ++LGSATP++E + VQ + + L R Sbjct: 367 EHEASYKQDSAPRYVTRDVAAWMARERGAALVLGSATPSIEAIFRVQHDPTWTAVELPER 426 Query: 381 AGNARPAIQHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 A V+D+ + ++ + L +R+ L A N+ +L LN+RGFA +LC Sbjct: 427 ANGKPLPSIEVVDMAHEFSAGSRSMFSHRLQQALRETLTAGNKAVLMLNQRGFAQFVLCR 486 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 CG++ +CP C T H+ + L CHHC P CP CGS +L G GT+++E Sbjct: 487 ACGFVPQCPSCSTSLTFHEKGNVLMCHHCGFHMTTPAVCPQCGSPYLKRFGAGTQRVEAE 546 Query: 498 LAPLFP-----GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 LA + I R+D DTT+RKGA ++ L E A +L+GTQM+AKG F DVT Sbjct: 547 LASILAGFSDVDAHIVRMDADTTARKGAHQKLLEEFAAADAAVLLGTQMIAKGLDFDDVT 606 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV +++ D L DFRSAER L QVAGR+GRA G V++QT+ +Q + Sbjct: 607 LVGVINADTQLRLPDFRSAERTFDLIEQVAGRSGRAQLPGRVIVQTYSATSIAIQAAAHY 666 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE--KL 670 ++ L R+ + PP+ V + +L + + Sbjct: 667 DRTSWLNHELESRKSLGYPPFVRLADVLVWGRDEAAVRREAGELYRRMTDAIDEHTQGDW 726 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +L P P + + G WR+ I ++ P+ + ++ + ++ +D+DP Sbjct: 727 TILAPTPCVLSRLRGSWRYHITVKAPATADIARVLTPV---FRSRRAMHELSVAVDIDP 782 >UniRef50_C9LLK8 Primosomal protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LLK8_9FIRM Length = 791 Score = 692 bits (1787), Expect = 0.0, Method: Composition-based stats. Identities = 240/796 (30%), Positives = 375/796 (47%), Gaps = 77/796 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDAS-ELPL 57 +A + + P L +TF Y +P+ ++ V +G R VPF +QE GI++S + Sbjct: 5 IAEILINRPSKHLNKTFSYKIPDHLSYVGSGWRCIVPFAGKQEE-GIILSCHEEEFSHIS 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDV--LFHALPILLRQG-------- 107 +L + + +DS P FT ++ + W + YY + D LF +R Sbjct: 64 YKLLEIYDAIDSVPWFTDAMIKTAKWISQYYMCTLIDALRLFLIDKKGIRTEVLYEINWK 123 Query: 108 ------------------------------------------RPAANAPMWYWFATEQGQ 125 + Y E+ Sbjct: 124 EIPECEDIWGLIDISVEIISKEDAVLVLGKTRCNRYLAKGFIKETELLQKVYKEPLEEWL 183 Query: 126 AVD----LNSLKRSPKQQQAL-AALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 A++ S+KR +Q+ + G+ + + F+ ++ + G L Sbjct: 184 AINNKSESESMKRGGRQKALWSHLCQIGQDSISSLISAGFSRDVIRRFCRNGNGHLFYRG 243 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVYLSVL 238 + N S +L EQ AV I A + + LL GVTGSGKTEVYL Sbjct: 244 KKTFSLVEN-KKSDNPRKLTAEQKYAVEYIIGAVNEERYKGILLYGVTGSGKTEVYLRAA 302 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 E+ +A G L+ VPEI LT Q ++ F + F V +HS L+ ER + + N E++ Sbjct: 303 ESAIAAGGTVLLEVPEIALTNQMVSYFADYFGDKVVFMHSNLSKGERYNNRQRIANEESS 362 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I+IG+RSALF PFKNL +I++DEE+DSSYKQ E RY+ RD+A A PI+LG+AT Sbjct: 363 IIIGSRSALFMPFKNLKLIIVDEEYDSSYKQTETPRYNGRDVAKVMAVIYNCPIVLGAAT 422 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---GLAPALITRMRQHL 415 P++ T + KK LL + +R +V D++ + L+ +I +R + Sbjct: 423 PSVTTFFAAKNKKIELLEMRQRVHRTPLPQIYVYDMRSEADIGHATNLSRPMIDLLRDTV 482 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 Q +++ IL LNRRGFAP L+C CG++ +C CD H+ +H L CH+C+S P+PRQ Sbjct: 483 QKNHKAILLLNRRGFAPTLMCKHCGYVFKCTHCDVPLVYHKDKHRLNCHYCESIFPLPRQ 542 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP C S ++ +G GT+++E+ L L P R D D+T+RK + + L+ G I Sbjct: 543 CPVCSSQDILYLGWGTQRIEEDLKKLLPEAKCCRFDVDSTARKYSAAKILSNFRDGKFDI 602 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L GTQM+AKGH P V V +L VD L + +AE+ L TQ AGRAGR +QG V+ Sbjct: 603 LFGTQMVAKGHDIPGVQSVGILSVDSTLNMPTYLAAEQTFNLITQCAGRAGRNLEQGRVI 662 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQT++ EH ++ T + YDAF +Q L RR + PP+T + + + A ++ Sbjct: 663 LQTYNTEHYVILTAAKQDYDAFYQQELEYRRTLHYPPFTRLMKITCFNKKESIARNHAEK 722 Query: 656 LRNLILSSPLADEK-LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 + I + V P K + +L++ + + + Sbjct: 723 IYRYIREMLPGIPDYISVTPPYDEPVKKVRNIYNVSLLIKGKT-------LRRLKLSMQN 775 Query: 715 IPDSRKVKWVLDVDPI 730 ++ ++DVDP+ Sbjct: 776 SKIFQENDIIIDVDPL 791 >UniRef50_A9GYC2 Primosomal protein N' n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GYC2_SORC5 Length = 807 Score = 692 bits (1786), Expect = 0.0, Method: Composition-based stats. Identities = 269/809 (33%), Positives = 400/809 (49%), Gaps = 84/809 (10%) Query: 1 MPV-AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASE-LP 56 MP+ A VA+PVPL + F Y +P + V+ G RV F +++ +G+V++VS+ S + Sbjct: 1 MPLLADVAVPVPLSQAFTYEVPAALAGEVRPGARVLCEFHRRK-LLGVVLAVSERSAAID 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 +++K + ++D+ P + L A YY PIG+VL ALP + R+ A A Sbjct: 60 PSKIKPLAALVDARPALPAELLAFLQELAAYYFAPIGEVLRLALPAIEREQVRALKAQGE 119 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQAL-----------------AALRQGKIWRDQVATLE 159 + G+A + K + + + Sbjct: 120 LDGVLDLGRAKQVGGRKVAYASATDVVEEPGTLRGQAAAVLALLRANGEQPVARIEERFG 179 Query: 160 FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNT------------------ 201 +AL+ L ++ L L P + LN Sbjct: 180 NARSALKKLAERNLVTLDEREPPRDPFFRRAEERDVPPELNAAQAEAAARIDAALAALAP 239 Query: 202 ---------EQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 Q A SA+LL GVTGSGKTEVYL +++ L +G+ ALVMV Sbjct: 240 SGGGEHPAIAQQEPRPA--GQEPRPSAFLLFGVTGSGKTEVYLRAIKSCLDRGRGALVMV 297 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ +ARFR RF + VLHSGL+D++R + W G+ + IG RSALF P Sbjct: 298 PEIALTPQLVARFRARFGDELAVLHSGLSDADRHAMWASLHGGKVRVAIGARSALFAPVP 357 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 +LG+I++DEEHD S+KQ+EG RYHARD+A+ RAH +LGSATP++E++ V++ K Sbjct: 358 DLGLILVDEEHDGSFKQEEGVRYHARDMALLRAHRAGAVCVLGSATPSIESVALVRRGKL 417 Query: 373 RLLRLTRRAGN-ARPAIQHVLDLKG----QKVQAGLAPALITRMRQHLQADNQVILFLNR 427 LRL RA A ++DL+ ++ L + + L A Q ILFLNR Sbjct: 418 AELRLPDRAHREASLPEVSLVDLRRFRAGPSGDPLISLPLHRALEKTLAAKEQAILFLNR 477 Query: 428 RGFAPALLCHDCGWIAECPRCDHYYTLHQAQ-------------------------HHLR 462 RGFAP+++C CG + C C T H+ + LR Sbjct: 478 RGFAPSVVCGSCGTLTTCDACSVALTYHRGRRRDARPPSPGGAPAPAAPLDERPEGGRLR 537 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CH+CD P+P +C +CG+ +L+ GLGTE+LE T+A FP ++R+DRD + K + Sbjct: 538 CHYCDYAGPLPDRCGACGARNLLLEGLGTERLEATIAGSFPEARVARLDRD-VAGKDRSQ 596 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 LA++ G IL+GTQM+ KGH P+VTLV +++ D AL DFR+AER QL QVA Sbjct: 597 AILAKMREGKIDILVGTQMVTKGHDLPNVTLVGVVNADAALGLPDFRAAERGFQLLVQVA 656 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR + G V++QT +PEHP + F E+ + +R + PP T ++R + Sbjct: 657 GRAGRRDRPGRVLIQTRNPEHPAIAFAAAHDVPGFLEREIRDREEVGYPPATRLALLRID 716 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + +L + P ++ VLGP A + GR+R+++LL+ R L Sbjct: 717 AVDESVGRGAAAKLAAHARTCPEGASRRVEVLGPSAAPIARLRGRYRFRVLLRARDRGPL 776 Query: 702 QHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + LI R + ++DVDP+ Sbjct: 777 RGALAALAGLIRDG-LDRNARVIIDVDPV 804 >UniRef50_C7N540 Primosomal protein N' n=2 Tax=Slackia RepID=C7N540_SLAHD Length = 695 Score = 690 bits (1782), Expect = 0.0, Method: Composition-based stats. Identities = 248/750 (33%), Positives = 360/750 (48%), Gaps = 78/750 (10%) Query: 1 MPVAHVALPV---PLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASE-- 54 M A V L + L ++ Y +P+ M V+ GC V V FG++Q +G V+SV+ E Sbjct: 1 MKTASVILDINTQSLDSSYTYAVPDDMEGVEVGCPVLVEFGRRQA-VGYVMSVAPLDEAD 59 Query: 55 --LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 ++LK ++ VL E F L+ A Y P+ + P P Sbjct: 60 ELPDASKLKPLLAVL-GESCFDEHAAALIEHMAYTYIAPLSSCIHLFTPAG---RTPKVV 115 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 W + + Sbjct: 116 KDGDGWRLQKPAKRR--------------------------------------------- 130 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTF----SAWLLAGVTGS 228 + D S + L L Q A AI A D ++ GVTGS Sbjct: 131 -----ARKDAVDDGEPEVRTSNDDLSLTEGQKAAFDAISEAIDGKPDAGRCIVVDGVTGS 185 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVYL + VL G+ A+V+VPEI LTPQT+ARF+ RF V V+HS + ++R Sbjct: 186 GKTEVYLRSIGKVLEVGQGAIVLVPEIALTPQTVARFKGRFGNTVAVMHSNMTQAQRYDE 245 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W K GE +V+G RSALF P LG+I+IDEEH+S+YKQ+ RYHARD+AV+ Sbjct: 246 WTAVKRGERRVVVGARSALFAPVGRLGIIIIDEEHESTYKQESAPRYHARDIAVWLGDRL 305 Query: 349 QIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQ---KVQAGLA 404 IP++LGSATP++E+L K +R + L RA V+D+ + ++ + Sbjct: 306 GIPVVLGSATPSIESLHACATKPGWRKVDLPERANGKPMPDVEVVDMAKEFHSGSRSMFS 365 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 L + + + A ++ +L LN+RGFA +LC DCG++ ECP C T H+ +H L CH Sbjct: 366 KRLTQALFETVDAGHKAVLLLNQRGFANFMLCRDCGFVPECPTCSVSLTYHEVEHALICH 425 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF--PGVPISRIDRDTTSRKGALE 522 HC ++PVP +CP CGS +L G GT+++E L L VP+ R+D DTTS + A E Sbjct: 426 HCGRRQPVPARCPECGSPYLRKFGAGTQRVESELKALLEGRDVPVIRMDSDTTSTRNAHE 485 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 + L R GA +L+GTQM+AKG F +VTLV +++ D L DFRSAER L QVA Sbjct: 486 ELLKRFARPGASVLLGTQMIAKGLDFDEVTLVGVINADTQLKLPDFRSAERTFDLIQQVA 545 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR G+V +QT+ E +Q + F L +R+M++ PP+ V Sbjct: 546 GRAGRGVFAGKVYVQTYVSESVAVQAAAHYDRKRFLIDELPKRKMLRYPPYARIADVLVW 605 Query: 643 DHNNQHAPLFLQQLRNLILSSPL--ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 H+ Q Q L + ++ E G P L K +RW IL++ P+ Sbjct: 606 GHDAQEVQKAAQALAQRVEAALHDNGGEGWVSFGAAPCLLSKIRNMYRWHILVKAPAGAD 665 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + +++ + + S+ V DVDP+ Sbjct: 666 VSAVLSPV---MRSRKASKTVNVACDVDPL 692 >UniRef50_D2RNT9 Primosomal protein N' n=2 Tax=Acidaminococcus RepID=D2RNT9_ACIFE Length = 797 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 239/646 (36%), Positives = 341/646 (52%), Gaps = 16/646 (2%) Query: 93 GDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR 152 G + A+ + + AT +G A N R QQ AL L GK Sbjct: 157 GLIARKAVVLSYDVKYKLREKTERTFTATPEGLAAQENGEVRGKSQQAALDLLPYGKTAS 216 Query: 153 D-QVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIH 211 ++ A L+ L +KG ++ E L L EQ A+ A+ Sbjct: 217 AGELEARGITSAVLRNLVRKGWLLEGRRRVLRDSYQ-GLEARKETLELTEEQQAAIQAVD 275 Query: 212 SAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF 269 +A + +LL G+TGSGKTEVYL + L G+Q +V+VPEI LT Q + RF+ F Sbjct: 276 AARENREARTFLLQGITGSGKTEVYLRLAARALQAGQQVMVLVPEIALTGQIVKRFKAWF 335 Query: 270 NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQ 329 A V V HS L+ SER W + ++G+A ++IG RSA+F PF +LG+I+IDEEH+ +YKQ Sbjct: 336 GAGVAVAHSRLSASERGDVWSRMRSGQARVLIGVRSAVFCPFADLGLILIDEEHEGTYKQ 395 Query: 330 QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRA-GNARPAI 388 +E YHAR +A YRAH ++P++LGSATP LE+ ++ Y LLRLT RA + Sbjct: 396 EERPSYHARLVAQYRAHYRKVPVVLGSATPDLESYYLAEKGGYTLLRLTHRARSGSHLPK 455 Query: 389 QHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 ++D++ + Q L+ AL TR+ +Q Q I+ LNRRGF+ +LC DCG C Sbjct: 456 VSIVDMREELHQGNRTVLSEALRTRLEHVVQNGEQAIVLLNRRGFSTFVLCRDCGESLSC 515 Query: 446 PRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGV 505 P C H + + CH+C PVP +CP CGS + G GTE+ E+ + L PGV Sbjct: 516 PNCAVSLVYHAREQLMECHYCGYTEPVPTKCPYCGSPRIRFFGTGTEKAEREIRELCPGV 575 Query: 506 PISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFS 565 R+D+D+TS K A EQ L G +L+GTQM+AKGH P+VTLV +L D L Sbjct: 576 KPLRMDQDSTSGKFAHEQILQAFRSGLYNVLLGTQMVAKGHDIPNVTLVGVLSADSQLNL 635 Query: 566 ADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAER 625 DFRS ER L TQ AGRAGR K GEV+ Q + E+P+LQ + Y+ FA+ L +R Sbjct: 636 PDFRSGERCFALLTQAAGRAGRGDKPGEVIFQAYDAENPILQLAARQDYEGFAKMELEQR 695 Query: 626 RMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA-DEKLWVLGPVPALAPKRG 684 + + PP+T + + + A Q+L N + + L L +LGP PA+ + Sbjct: 696 KELSYPPFTRMLKITVLHKKEEEALAIAQKLVNALEAWQLESGHPLEILGPFPAIVARVN 755 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +R +LL+ P ++ + + +P+ DVDPI Sbjct: 756 QIYRINVLLKSPRMKPVKEWLRQ--SEYRELPN-----VYFDVDPI 794 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 82/215 (38%), Gaps = 15/215 (6%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A VA+ +P + R F Y +PE + + G RV VPFG QQ G +V +L Sbjct: 1 MEYAKVAINLPAKNIFRQFTYHVPETLDFLGQGWRVVVPFG-QQLLEGFIVEEDREPDLS 59 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP--ILLRQGRPAANAP 114 ELK + +V+ +EP F + W + YY + + L +P L P Sbjct: 60 -RELKDIADVVGTEPWFDSEMLATAYWLSQYYLCTLAEALRLFIPGRKSLAAVGKYVPVP 118 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA-LQALRKKGL 173 + + + D +LK ++ + +A + ++ ++ Sbjct: 119 EAEGLSRPEQELYDFLTLKGPLPRKAIRRIPGGETALKGLIARKAVVLSYDVKYKLREKT 178 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVG 208 + TPE + N V G+ Q A+ Sbjct: 179 ERTFTATPEGLAAQENGEVRGKS------QQAALD 207 >UniRef50_C9KIM0 Primosomal protein n=2 Tax=Veillonellaceae RepID=C9KIM0_9FIRM Length = 828 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 243/812 (29%), Positives = 376/812 (46%), Gaps = 92/812 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M A V + +P + R + Y +PE + ++AG RV VPFG ++ G VV + + P Sbjct: 24 MKTADVFVNIPVKSIARAYTYRVPEELSKIEAGWRVFVPFGSRKVE-GFVVETHELAAAP 82 Query: 57 LN-ELK-----------------AVVEVLDSEPVFT-HSVWRLL------LWAADYYHHP 91 N LK + L + + + RL L Y Sbjct: 83 ENITLKDVIAAVDEECWFSPQMIEIARWLSDFYLCSLAEIMRLFMPGKSGLRITVRYEAD 142 Query: 92 IGDV---------------------------LFHALPILLRQGRPAANAPMWYWFATEQG 124 L ALP + + Y + Sbjct: 143 ESQPDHMMLAMRGCRAIYDTLLREGPQKKAELRRALPEWQEELDDLLAKLLKYHIVRKVY 202 Query: 125 QAV--------------------DLNSLKRSPKQQQALAA-LRQGKIWRDQVATLEFNDA 163 +A L+S +R Q L + ++ + + A Sbjct: 203 EAQKRDAAQYEKIVVLCGEVTPGLLDSYRRKKAQAHLLELLQQTPEVPLAALKAQHVSLA 262 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWL 221 + L GL ++ + + S E + L +Q V ++ A D + +L Sbjct: 263 TVHNLEAAGLAEIRQRRVLRDSY-RDARASKEEVALTEDQQQVVAQVYPAIDAARYQGFL 321 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKT+VY+ + E V A G++ +V+VPEI LT Q + F+ F + V+HS L+ Sbjct: 322 LKGVTGSGKTQVYIELAERVRAAGRRVIVLVPEIALTGQVVMAFKSYFPDDLVVVHSRLS 381 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLA 341 +ER A L+ + EA I+IG RSALFTP ++G++++DEE D SYKQ E RYHAR +A Sbjct: 382 LAERNDAILRVRRNEAGIIIGARSALFTPADDIGLVILDEEQDMSYKQDESPRYHARVVA 441 Query: 342 VYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA 401 A ++LGSATP+LE+ Q + LL + RR G+ + H +D++ + Sbjct: 442 EKIARVHGAVLLLGSATPSLESYFRAAQGELTLLVMPRRIGDIPLPVIHCVDMRQELRMG 501 Query: 402 G---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 ++ AL + + + QVI+ LNRRGF+ ++C CG + C C H+ Sbjct: 502 NRHIISRALQELIEKTIARHQQVIIMLNRRGFSTFVMCRSCGEVIRCRHCGLPLVYHR-N 560 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 L+CHHCD Q PVP CP CGS ++ G GTE+LEQ LA L P + R+DRDTT+ K Sbjct: 561 GQLKCHHCDVQEPVPDVCPKCGSRYIKYFGSGTEKLEQELAALVPSARVIRMDRDTTTTK 620 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 A ++ L RG IL+GTQM+AKGH P+VT V ++ D +L DFR+AER L Sbjct: 621 FAHQEILESFRRGEYDILLGTQMVAKGHDIPNVTAVGIISADSSLNMPDFRAAERCFMLI 680 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 TQ AGRAGR +G+VV+QT++P H + + + Y+ F + +A R+ + PP++ V Sbjct: 681 TQTAGRAGRHETRGQVVIQTYNPTHYAVTCGIRQDYEGFFHKEIALRQELFYPPYSRLVK 740 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 + ++ + A + L + E V+GP PA+ G +R+ +L++ Sbjct: 741 LLYQNASEVKAKAEAEALVKSFELAFAGREGHQVIGPAPAVIACFRGIYRFVVLIKTADL 800 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + + + +D+DPI Sbjct: 801 PAVHDFLKEQQLHLRAD-------VAIDIDPI 825 >UniRef50_Q2JJJ7 Primosomal protein N' n=3 Tax=Cyanobacteria RepID=Q2JJJ7_SYNJB Length = 801 Score = 687 bits (1772), Expect = 0.0, Method: Composition-based stats. Identities = 258/807 (31%), Positives = 374/807 (46%), Gaps = 95/807 (11%) Query: 8 LPVP-LPRTFDYLLPEGMTVKAGCRVRVPFGKQQE-RIGIVVSVSDASELPLNELKAVVE 65 + P L F Y +PEG +AG + VPFG+Q + + + + ++ + Sbjct: 3 VDHPHLGGCFTYRVPEGSAPEAGDLLSVPFGRQMAGAVALGWRSELPAGVDPQSVREIEA 62 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP----------- 114 V+ + W LL ADYY P+ V+ LP L Sbjct: 63 VVAKG-ILPKEFWPLLQRVADYYLTPLAQVVRTVLPPGLLSRSQRRVRLLRLPAEGEECS 121 Query: 115 ------------------MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA 156 Y A+ L L+R + + G++ A Sbjct: 122 PAAQTLLQLLQAKGGELSWRYVQQQVPTAALALRELQRRGWVESFWQEQQGGRVRTQLAA 181 Query: 157 TL-----------------------------------EFNDAALQALRKKGLCDLASETP 181 +L + A LQ L +KG L Sbjct: 182 SLADDSPEGLSLPQQKALQILKQKGGELLLAEWERLAGVSRAVLQGLARKGRVHLYERPL 241 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + L QA AV AI A F +LL GVTGSGKTEVYL V+ V Sbjct: 242 LRLGDASLPGWRDPPRPLTAAQAQAVEAIRQALGRFQRFLLHGVTGSGKTEVYLQVIAQV 301 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 L QG+ ALV+VPEIGLTPQ + RFR R + V HSGL++ ER W + + +VI Sbjct: 302 LQQGRSALVLVPEIGLTPQLMDRFRARLRSQVWAYHSGLSEGERYDTWRQMLSSTPQVVI 361 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPA 360 GTRSA+F P LG+IV+DEEHD S+KQ + YHAR +A +RA P++LGSATPA Sbjct: 362 GTRSAVFAPLSKLGLIVLDEEHDDSFKQDQPQPCYHARQVAEWRAELAGCPLVLGSATPA 421 Query: 361 LETLCNVQQKKYRLLRL--TRRAGNA----RPAIQHVLDLKGQKVQAG---LAPALITRM 411 +ET Q R +RL +R A ++D++ + L+ L + Sbjct: 422 VETYAAHLQDPQRWIRLALPQRIPQAGIPATLPQLELVDMRQELQAGNRSILSRRLHQAL 481 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ---AQHHLRCHHCDS 468 +Q L Q ILF+ RRG + +LC CG++ C CD T H LRCH+C + Sbjct: 482 QQTLDRGEQAILFVPRRGHSTFVLCRSCGFVLTCEHCDVSLTFHLAHLGGQELRCHYCGA 541 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 ++P P++CP+CGS +L G GT+++ + L +P + I R D D T RKG+ L + Sbjct: 542 RQPHPQRCPACGSPYLKHFGTGTQKVVEVLHQHWPQLSILRYDSDATRRKGSHRDLLEQF 601 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A++L+GTQML KG P VTLV ++ DG L AD+R+ ER QL TQVAGR+GR Sbjct: 602 RSGKAQVLVGTQMLTKGLDIPQVTLVGVMAADGLLHQADYRAGERSFQLLTQVAGRSGRG 661 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 G+ ++QT+ PEHP+L+ +L + Y+ F + L +RR PP + +++R + Sbjct: 662 SLPGQAIIQTYLPEHPILRAVLAQNYEGFLQAELQQRREGGYPPHRALILIRLSSTRLEA 721 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ-----HPSRVRLQH 703 + ++ + P VLGP PA + GR+RWQILL+ R +L Sbjct: 722 LERYCHRVAERLQGIPA-----EVLGPGPAQVERVAGRYRWQILLKQLPDQGWDRPKLAA 776 Query: 704 IINGTLALINTIPDSRKVKWVLDVDPI 730 I + + ++ +DVDP+ Sbjct: 777 QIQAAIGH-----PPQGIRVSIDVDPL 798 >UniRef50_A1HMX8 Primosomal protein N' n=2 Tax=Veillonellaceae RepID=A1HMX8_9FIRM Length = 811 Score = 685 bits (1767), Expect = 0.0, Method: Composition-based stats. Identities = 211/634 (33%), Positives = 322/634 (50%), Gaps = 16/634 (2%) Query: 107 GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALA-ALRQGKIWRDQVATLEFNDAAL 165 + A L+ L P QQ+ L + + ++ +++ + + Sbjct: 183 KFRPRYEQRLMLAVNRREAAETLDRLTGKPAQQRLLTVLMEESELTPNRLKQYRISADTV 242 Query: 166 QALRKKGLCDLASETPEFSDWR---TNYAVSGERLRLNTEQATAVGAIHSAADT--FSAW 220 + L GL + + A R+ L EQ AV I +A + ++ Sbjct: 243 KRLIAAGLVRSERRRVMRNSYAQLCREPAPQENRMALTNEQRQAVTQILAAIASREHKSF 302 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 L+ GVTGSGKT+VY+ QG+Q +VMVPEI LT QT++RF ERF V V+HS L Sbjct: 303 LIHGVTGSGKTQVYIEAAAAARQQGRQVIVMVPEIALTGQTVSRFNERFGEDVVVVHSRL 362 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDL 340 + ER AW + + GEA IVIG RSA+F P +G+I++DEEH+ +YKQ+E RYH R++ Sbjct: 363 SAGERHDAWQRIRAGEAGIVIGARSAVFAPCTQIGLIILDEEHEFTYKQEESPRYHTREV 422 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ 400 A+ RA ++LGSATP+LE+ ++ LL L+ R V+D++ + Sbjct: 423 ALMRARQAGASVVLGSATPSLESYYQALAGRHVLLTLSERVDGRALPAVTVVDMREELAA 482 Query: 401 AG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA 457 ++ L + Q Q Q I+ LNRRG+A +LC +CG + C CD H Sbjct: 483 GRRGVISQPLRELLTQTRQEGGQAIILLNRRGYATFVLCRECGHVLRCEHCDVSLVYHAT 542 Query: 458 QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 +RCH+C R P CP+CGS ++ G GT+++E+ LA LFP + R+D+DTT+ Sbjct: 543 DKTIRCHYCQKTRQAPSLCPACGSRYIRYFGTGTQKVEEELAALFPEARVVRMDQDTTTG 602 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 K A E+ L+ RG IL+GTQM+AKG P+VT V ++ D +L DFR+AE+ L Sbjct: 603 KMAHERILSAFSRGEYDILLGTQMVAKGIDIPNVTAVGIIAADTSLNLPDFRAAEKTFAL 662 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 TQ AGRAGR + G VV+QT++PEH ++ Y AF A RR + PP+ + Sbjct: 663 ITQAAGRAGRGSQPGHVVVQTYNPEHYAIKAGAAHDYHAFYNIEAAYRRQLHYPPFGGLI 722 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 + Q L + + + + K V+GP PA K +R IL++ Sbjct: 723 KLTVHGTEETLVCGHAQNLADELNRALSSIGKTQVVGPFPAPIAKIEDIFRMNILIKSN- 781 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + ++ + + +LD+DP+ Sbjct: 782 ------AMAEVKETLVSMGVASRRDVILDIDPLN 809 Score = 114 bits (287), Expect = 1e-23, Method: Composition-based stats. Identities = 49/233 (21%), Positives = 86/233 (36%), Gaps = 16/233 (6%) Query: 2 PVAHVALPVPLPR---TFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 +A VA+ + + TF YL+P + V G RVRVPFG+++ G VV+V + +E Sbjct: 3 RIAEVAVNIAVRTIAATFSYLIPPELAFVGRGWRVRVPFGQREAE-GFVVAVKEQAEAEG 61 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALP---------ILLRQGR 108 LK V+ VLD EP F ++ + W ++YY P+ + L +P Sbjct: 62 --LKPVLSVLDDEPWFDENMLQTAEWMSNYYLCPLAEALRLFVPGKGELKSHIAYRLNES 119 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 + + +++ V +S Q L + N A+ Sbjct: 120 ESKPSSSLSCQISDEMNQVLNYLRAKSLTAQHQLVKKFGPNVLTALRKLERLNLVERAAM 179 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 + + R A + +RL Q + + ++ L Sbjct: 180 SISKFRPRYEQRLMLAVNRREAAETLDRLTGKPAQQRLLTVLMEESELTPNRL 232 >UniRef50_B0MTV2 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTV2_9BACT Length = 748 Score = 684 bits (1766), Expect = 0.0, Method: Composition-based stats. Identities = 265/758 (34%), Positives = 372/758 (49%), Gaps = 38/758 (5%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M A + LP+ P + + + EG+T+ G V VPFG+ + GIV + D + Sbjct: 1 MRYADIVLPLAQP-LYTFAVAEGVTLCEGMAVVVPFGRSKIYTGIVWRLHDRRP-DFKTV 58 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-------RPAANA 113 K V VL P+ R W ADYY +G+V+ ALP L++ Sbjct: 59 KTVSRVLYGTPLLDERQRRFWEWVADYYMCTLGEVMRVALPSLMKPSGHGEEEFAADEFR 118 Query: 114 PMWYWFATEQGQAVDLNSL--------KRSPKQQQALAALRQGKIWRDQVAT--LEFNDA 163 P WF G+A+ + L +R+P+Q++AL L +VA L + Sbjct: 119 PRREWFVALAGEALTADGLAAALERMGRRAPRQREALEELAALAPDGAEVARSRLAADRT 178 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 AL L KKGL + L+ Q A I + + LL Sbjct: 179 ALALLVKKGLLTCIEREV--APGPVTGGAQFRLPTLSAAQRKAAEEIRAVFADRATVLLR 236 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKTE+Y+ VLA+G Q L++VPEI LT Q + R R+ F V HS L D Sbjct: 237 GVTGSGKTEIYMHFAAEVLARGGQVLLLVPEIALTAQLVDRLRQVFGERVIAYHSKLTDR 296 Query: 284 ERLSAWLKAKN---GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARD 339 +R +L+ ++ GE +VIG RSA+F P + L ++V+DEEHD SYKQ + RY ARD Sbjct: 297 KRTELYLRLRDSAGGE--LVIGARSAIFLPLRRLELVVVDEEHDPSYKQTDPAPRYQARD 354 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD----LK 395 AV +LGSATP+LE+ N KY + L R G +R V D +K Sbjct: 355 CAVLMTRLLGCRTLLGSATPSLESYLNAATGKYGSVVLAERYGPSRMPQILVSDTIRAVK 414 Query: 396 GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 + A L+ RM + L Q +LF NRRGFAP + C +CGW A CP C+ TLH Sbjct: 415 RGERHAHFNKLLLDRMEETLGGGGQAMLFQNRRGFAPYVECRECGWTARCPDCNVTLTLH 474 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 + + CH+C PVP +CP C T VP+G GTE++E+ +A +FP ++R+DRD+ Sbjct: 475 KGSGRMVCHYCGHTEPVPAKCPHCRVTEPVPMGFGTEKVEEEIARVFPEARVARLDRDSV 534 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 + + A Q + RG IL+GTQM+ KG F V LV +L+ D L + DFRSAER Sbjct: 535 TSERAFRQIVEAFARGDDDILVGTQMITKGFDFGGVELVGVLNADNLLNNPDFRSAERAF 594 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 QL QVAGRAGR G VV+QT P HP+LQ ++ Y+A A Q LAER+ PP+ Sbjct: 595 QLLMQVAGRAGRRENPGTVVIQTAEPGHPVLQQVIAGDYEAMARQQLAERKAFFYPPYAR 654 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 + + + L + VLGP + G + +LL+ Sbjct: 655 LLNLLLRHRDPVTLRRAANALAAALRERFGR----RVLGPTAPPVDRVRGEYLATLLLKV 710 Query: 696 PSRVRL---QHIINGTLALINTIPDSRKVKWVLDVDPI 730 + L + + G L + P+ + V + DVDP Sbjct: 711 EAGASLARAREAVRGILDRVVKSPECKGVTILCDVDPQ 748 >UniRef50_C4F8Z6 Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8Z6_9ACTN Length = 841 Score = 684 bits (1765), Expect = 0.0, Method: Composition-based stats. Identities = 243/794 (30%), Positives = 374/794 (47%), Gaps = 73/794 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDA----- 52 V + +P L F Y +P + + G V VPFG++ G VV+ S++ Sbjct: 48 YVSVVIDIPARALSEPFAYGVPLALDGVCQVGATVLVPFGRR-VEAGYVVARSESLGKLP 106 Query: 53 --SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG--- 107 L +K V EV+ + + + L W + Y P+ + L LP Sbjct: 107 GAEGLEPFRIKPVREVVAAPAF-SAASAELAFWMSREYVAPLSECLRLLLPPGGAGKVVR 165 Query: 108 --------RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE 159 P + + + + +R+ +Q+Q + AL G + ++ + Sbjct: 166 REDGSYAYEPPTVTSVTVRWVSLTEEGRSFEPAERAVRQRQLIDALSCGPVTTRELNLMN 225 Query: 160 FN-DAALQALRKKGLCDLASETPEFSDWRT---NYAVSGERLRLNTEQATAVGAIHSAAD 215 + A +++L K+G+ + + + A + L Q A+ AI A + Sbjct: 226 GDLSATIRSLEKRGVVTVEERRSWRGCEGSTTLSSANASAPKELTAGQQNALDAIARATE 285 Query: 216 --TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 + L+ GVTGSGKTEVYL+ +E VLA G+ A V+VPEI LT QT+ RFR RF V Sbjct: 286 AASGDVVLVDGVTGSGKTEVYLTAIERVLAHGRSACVLVPEISLTAQTVGRFRSRFGDAV 345 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 V HS L+ ERL W ++G A +V+G RSALF P +LG+IVIDEEH+ SYKQ Sbjct: 346 AVFHSRLSAGERLDQWDMVRSGAARVVVGARSALFCPLADLGLIVIDEEHEQSYKQGSSP 405 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK-----KYRLLRLTRRAGNARPAI 388 RYHAR++A A ++LGSATP+ E L + ++ + + R G AR Sbjct: 406 RYHAREVAAKLAQLHGCALVLGSATPSAEALARCEAGGHGGARWTRVEMPERPGTARLPE 465 Query: 389 QHVLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAEC 445 V DL+ + ++ + L+ + + ++ + +L NRRGFA L+C +CG + C Sbjct: 466 VIVADLRREFASGSRSIFSKPLLDALDEVVERRQKAVLLHNRRGFASFLMCRECGCVPTC 525 Query: 446 PRCDHYYTLHQAQHHLRCHHCDSQRPV------PRQCPSCGSTHLVPVGLGTEQLEQTLA 499 C T H+ H L CH C S V CP CGS +L +GLGT+Q+E L Sbjct: 526 KHCSTALTYHERTHTLECHTCGSSYRVRPYPEYGSACPKCGSRYLAKMGLGTQQVEDALR 585 Query: 500 PLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLD 558 L P V + R+D D+T KGA ++ L + +L+GTQM+AKG FP+VTLV +++ Sbjct: 586 ALLPEDVAVIRMDADSTRTKGAHQKLLEQFDAAECAVLLGTQMIAKGLDFPEVTLVGVIN 645 Query: 559 VDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFA 618 D AL DFR+ ER L QVAGRAGR G V++QT+ P+ P+++ + F Sbjct: 646 ADYALKMPDFRAGERAFDLLEQVAGRAGRGEAPGRVIIQTYLPDEPVIRAVKTHDRSVFT 705 Query: 619 EQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL----------------- 661 E L RR PP+ V + + A + ++ + Sbjct: 706 EHDLGMRREALYPPYVRLANVLVWGKDERAARGLVMRIAEELRVEFGLDAAPMLRPVVET 765 Query: 662 -------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 SS + +LGP P + + R+R+ I+++ P L ++ ++ T Sbjct: 766 GSAGVEFSSRELLSRPQILGPTPCVIERAKDRYRFHIVVKAPLNCDLSGALSAAVSRAGT 825 Query: 715 IPDSRKVKWVLDVD 728 P V +DVD Sbjct: 826 RP---GVSIAVDVD 836 >UniRef50_B0U139 Primosomal protein N' n=20 Tax=Francisella RepID=B0U139_FRAP2 Length = 718 Score = 682 bits (1760), Expect = 0.0, Method: Composition-based stats. Identities = 268/732 (36%), Positives = 390/732 (53%), Gaps = 20/732 (2%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VAL VP DY + + V+ RV V G++Q IG +V+ + L +K Sbjct: 2 IVKVALAVPPSYLLDYSI-KDTNVELFSRVLVQVGERQ-LIGFIVAKDIKIDYELTRVKP 59 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 +++++D + +V RL+LW + YY + + + ALP + + Y + Sbjct: 60 ILKIIDQ--PISDAVQRLILWLSQYYCCDLYNAIRLALPNDFLKIEKVSPQKDTYVYLD- 116 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 ++L K + KQQ L + R + + + L K + + + Sbjct: 117 ---QIELQQHKLTSKQQDVLKIFANNEALRFEDLKELASSYVINKLLDKNILKKTYKLRQ 173 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + N S LN EQ A I S + F LL GVTGSGKTEVYL +++ L Sbjct: 174 SN----NTIESDLPKLLNPEQQYAFEQITSQSG-FKVSLLYGVTGSGKTEVYLHTIQSFL 228 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 A+ +Q LV+VPEI LTPQTI RF +RF + V LHS L+D RL+ WLK KNGEA IVI Sbjct: 229 AKSQQVLVLVPEINLTPQTIKRFEKRFIDKNVVALHSKLSDKTRLTNWLKIKNGEADIVI 288 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPA 360 TRS + FKNLG+I++DEEHDSSYKQQ RY+ARD+A++RA +P++LGSATP+ Sbjct: 289 ATRSGVLADFKNLGIIIVDEEHDSSYKQQTTTIRYNARDVAIFRASQLDVPVVLGSATPS 348 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ 420 +++ N KY LL+L +RA N+ +LDLK V G++ L + + Q + Q Sbjct: 349 IQSYYNYLIGKYNLLKLNKRALNSHQNTIELLDLKSSIVDNGISNILFSLIEQSINDHQQ 408 Query: 421 VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ-HHLRCHHCDSQRPVPRQCPSC 479 ++F+N+ GFA AL+C CG EC RCD YTLH +L CH C S++P+ CPSC Sbjct: 409 SLIFINKLGFAKALVCKGCGEAVECKRCDKPYTLHTHPYQYLECHFCGSRKPIVTACPSC 468 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 + L G GTE+++ + FP I R DR L ++ +++GT Sbjct: 469 NAEELFAYGSGTEKVQSRIEARFPYNKIVRFDRSNIKTMNDLHSINQMINDKQVDVIVGT 528 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM+AKGHHF ++TL L+++D L+S DF + ER AQ QV+GRAGRA K G ++LQT+ Sbjct: 529 QMIAKGHHFENITLAGLINIDAGLYSTDFHAIERTAQTIVQVSGRAGRADKPGRIILQTY 588 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 P++ LLQ L+ Y F + L +R+ PP+T + AE + L+Q+ Sbjct: 589 QPDNKLLQLLVNSDYLDFLDYLLEQRKYASYPPYTYQAQIIAESKDENKVLNMLEQIYLS 648 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSR 719 + S + V P+PAL K+ +R+ ILL SR ++ II Sbjct: 649 LTDS----SGVQVSKPLPALHLKKNNVYRYSILLTSNSRSQINSIIKWIANTQIMSSLKN 704 Query: 720 KVKWVLDVDPIE 731 VK D+DPIE Sbjct: 705 SVKMYFDIDPIE 716 >UniRef50_B8FB87 Primosomal protein N' n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FB87_DESAA Length = 824 Score = 680 bits (1755), Expect = 0.0, Method: Composition-based stats. Identities = 212/636 (33%), Positives = 316/636 (49%), Gaps = 8/636 (1%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA 163 R + + + D + ++S + + R + Sbjct: 187 HRVMQKGRVRSKTETYIKALKEQSDAPARQKSRHKILEILPKDGDMTMRALKKEVPSAPR 246 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLL 222 + + + G + + + R L +EQ A I A + + LL Sbjct: 247 WIWEMEEAGEIQVFEKEVYRDPFGEPIPPDETRFTLTSEQEVAYTEIVGALGRGYKSILL 306 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKTEVYL +E L QG +V+VPEI L Q RF RF V VLHSGL D Sbjct: 307 HGVTGSGKTEVYLRCVEKALEQGLSVIVLVPEIALISQMQRRFLARFGEKVAVLHSGLTD 366 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 ERL W++ G+A I +G RS++F P KN G++++DEEHD SYKQ RY ARDLAV Sbjct: 367 GERLDQWMRIVRGQAPIALGARSSIFAPVKNPGLVIVDEEHDESYKQDSRLRYQARDLAV 426 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 R H E+ +LGSATP++ + N K++ + + R ++DL+ Sbjct: 427 MRCHMEKAVTVLGSATPSISSRHNCANGKFQKISIKNRVAERPFPEVTLVDLRNTTTGQN 486 Query: 403 LA---PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 + L + + L + Q +LFLNRRGFA +C +CG C CD T HQ Sbjct: 487 RSLLTDVLKHHLTETLAKNEQALLFLNRRGFANFPVCLECGGTITCAHCDVSLTYHQEDG 546 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 +CH+C + + + CPSCGS L +G+GTE++E +L +FP I R+DRDT ++KG Sbjct: 547 CFQCHYCGFCQDITKGCPSCGSRKLKMMGMGTEKVEDSLRSMFPQAIIGRLDRDTAAKKG 606 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 L L + I++GTQM+ KGH FP++TLV ++ D ++ DFR+ ER QL Sbjct: 607 GLVSVLKGLREKTTDIVVGTQMITKGHDFPNITLVGVVCADLSMGFPDFRAGERTFQLLA 666 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QVAGRAGR K G VVLQT++PEH + T YDAF + L R ++ PP+ + Sbjct: 667 QVAGRAGRGEKPGRVVLQTYNPEHFCITTACANDYDAFCNEELKFRHQLKYPPFARLAQI 726 Query: 640 RAEDHNNQHAPLFL----QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 R +++ F ++ R L+ + + VLGP+P+ + RWQ+LL+ Sbjct: 727 RFTGEDSKETGAFANSIGEECRKLLWAEKAFKNSVQVLGPIPSPIARIARMHRWQMLLKG 786 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + +I + ++ V+DVDP+ Sbjct: 787 LDHKAFRAYLRQVNRIIQSKAGAKGPTAVIDVDPVN 822 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 77/178 (43%), Gaps = 8/178 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 VA+ PL +T Y LP+ + G RV VP G+++ G ++ + E + Sbjct: 17 YLEVAVAAPLEQTLTYKLPQDQAPLAEPGKRVLVPMGRRRV-TGYILGPAPKPE--GFKA 73 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 ++++++LD P+F ++ L W ADYY +P+G + +LP + A Sbjct: 74 RSILDILDELPLFPEAMVPLFRWLADYYIYPLGLTIKESLPSGVNHLELAMVKITP---E 130 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 E+ +LK + L A + + A + + + +++KG ++ Sbjct: 131 GEKALEAGQANLKEQRFLEILLTAGATAQNQLLKKAGKGASVSTILTMQRKGFVEIHR 188 >UniRef50_C0QW49 Primosome assembly protein PriA n=2 Tax=Brachyspira RepID=C0QW49_BRAHW Length = 661 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 202/549 (36%), Positives = 297/549 (54%), Gaps = 10/549 (1%) Query: 190 YAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 A L+LN EQ + I+ + D+ +LL GVTGSGKTEVYL ++ V+ GKQ Sbjct: 114 PAKQKPYLKLNEEQEAVLKKINESIDSNNPKTFLLHGVTGSGKTEVYLQAIKKVVDMGKQ 173 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 A+V++PEI LTPQTI RF ERF + VLHS L+ + + W K E IVIG RSA+ Sbjct: 174 AIVILPEISLTPQTIKRFAERFEGKIAVLHSKLSPNSKYRYWQMIKKDEIKIVIGARSAI 233 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 F+P NLG+IVIDEEH++SYK + RYHAR +A YR E ++LGSATP++E+ Sbjct: 234 FSPTPNLGIIVIDEEHETSYKAGDTPRYHARQVAFYRKSQENATLLLGSATPSIESFYYA 293 Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA---PALITRMRQHLQADNQVILF 424 K LL L +RA + +LDLK +K L+ + + L+ Q+ILF Sbjct: 294 SIGKIELLSLKKRAASVNMPEVKILDLKKEKRADAFPMITQKLVEEINKKLEKKEQIILF 353 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNR+G+AP + C C + ECP C T H+ ++ + CH+C + + C C H Sbjct: 354 LNRKGYAPVVSCSYCQRVLECPNCSVSLTYHKKKNVVMCHYCGYTQYLDELCDECKIGHF 413 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 +G GTE++E+ L LFP + R+D+DT E+ G IL+GTQM+AK Sbjct: 414 ERIGSGTEKVEEHLNILFPNAVVERMDQDTVGGTKNYEKIFKRFSDGEIDILVGTQMIAK 473 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G FP+VTLV +L D +L DFRSAER L TQVAGR+GR K+G V +QT+ P + Sbjct: 474 GLDFPNVTLVGVLFADMSLHIPDFRSAERTFNLITQVAGRSGRGDKKGIVYIQTYSPNNY 533 Query: 605 LLQTLLYKGYDAFAEQALAERRM-MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL-S 662 ++ Y +F + + R+ + PP++ V + + + ++ +++ Sbjct: 534 SIECAKNHDYISFYNKEIENRKAPLNYPPFSRLVRLVIRGIDEKKVENDANKIADMLRME 593 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 + +K+ +LG K +RW IL++ PS L++ N + Sbjct: 594 TYNDSDKIIILGATACAMSKLNKYYRWNILIKTPSHSLLKNFFNKLNTNFAADKGN---Y 650 Query: 723 WVLDVDPIE 731 +D+DPI Sbjct: 651 IEIDIDPIN 659 Score = 95.0 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 8/131 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK-AGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V +P+ R Y P+ + GCRV P K + GIVV + + ++ Sbjct: 2 YVKVVFNLPIDRILTYRKPDEINDSLVGCRVVAPI-KGKNNKGIVVEEVETIDGN-YKVY 59 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL-----LRQGRPAANAPMW 116 + +D EP+ + ++L W ++YYH G+ LF ALP+ ++ +P Sbjct: 60 PIKARIDLEPICSDKEFKLAKWMSNYYHSSFGEALFAALPVGTPAKKEKKAKPIPAKQKP 119 Query: 117 YWFATEQGQAV 127 Y E+ +AV Sbjct: 120 YLKLNEEQEAV 130 >UniRef50_C6XMJ5 Primosomal protein N' n=2 Tax=Alphaproteobacteria RepID=C6XMJ5_HIRBI Length = 740 Score = 680 bits (1754), Expect = 0.0, Method: Composition-based stats. Identities = 239/738 (32%), Positives = 345/738 (46%), Gaps = 27/738 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +A V LP+PLP FDY L E M V+ G V VP G + G+V + LK Sbjct: 16 QIASVLLPMPLPEAFDYRLHEDMKVEVGAFVTVPLGARSV-TGVVWGLKQGP--SKRPLK 72 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 V EVL++ P+ + ++ Y P+G++L LR +P + Sbjct: 73 YVEEVLEAAPLMPQVTRDFVERSSKYTCTPMGNMLAM----CLRSRDALLPSPTETYVYR 128 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 + + + ++ +A + G + + + ++ L G LA Sbjct: 129 TKSELPRITPARQKVLDIAPQSADQ-GMTAAELARQADVSTGVVKGLVDSGA--LAQHEA 185 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLE 239 + L EQ A+ A + F LL GVTGSGKTEVY + Sbjct: 186 PIDKPFGKPNSELKGFDLTDEQQAGADALCEAVRSKEFKPILLDGVTGSGKTEVYFEAIA 245 Query: 240 NVL--AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEA 297 L Q LV++PEI LT RF RF A HS ER W + G A Sbjct: 246 EALRTEPDAQILVLLPEIALTQAVRERFENRFGAAPAEWHSNATQKERRRVWREVGAGRA 305 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 IV+G RSALF PF+NL +I++DEEHD SYKQ EG Y RDL+V RAH ++L SA Sbjct: 306 QIVVGARSALFLPFQNLRLIIVDEEHDGSYKQDEGAVYQGRDLSVMRAHLGSATVVLASA 365 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG--QKVQAGLAPALITRMRQHL 415 TP+LETL N Q +Y+ ++L R G A + D+K L+P L+ + Q+L Sbjct: 366 TPSLETLANAYQGRYQHIKLLARPGAAVLPEILLADMKENPPAKDCWLSPLLVDALEQNL 425 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 A Q +L+LNRRG+AP ++C CG + P + + T H+ L CH P Sbjct: 426 DAGEQSLLYLNRRGYAPLVICKGCGERLKAPDTESWLTEHRYTGMLVCHLTGFSMKKPVN 485 Query: 476 CPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP CG+ L+ VG G E+L + + LF G + DT L ++ + +G Sbjct: 486 CPHCGAADSLMGVGPGVERLAEEVRGLFQGARVEVFSSDTARNPEELNGIISRMEQGEVD 545 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALF---SADFRSAERFAQLYTQVAGRAGRAGKQ 591 ILIGTQ+ AKGH+FP++TLV +D D L +D R+ ER QL +QV+GRAGRA K Sbjct: 546 ILIGTQIAAKGHNFPNLTLVGAVDADSGLKGGQGSDLRAGERTFQLLSQVSGRAGRADKP 605 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G ++QT+ P+ P +Q LL D F E + R + PP+ V N+ A Sbjct: 606 GRAIIQTYAPDSPSIQALLANDRDWFMELEMKSREELGFPPFGRLAAVVISAENSLAADD 665 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 ++ + + + GP PA GR R ++L++ V L ++ Sbjct: 666 AAATFVRGAPNA----DGVDIWGPAPAPIAVLRGRHRRRMLIRANRNVDLSAYLSAWRER 721 Query: 712 INTIPDSRKVKWVLDVDP 729 I S V+ LD++P Sbjct: 722 I---KLSSSVRVSLDIEP 736 >UniRef50_D2MQI5 Primosomal protein N' n=1 Tax=Bulleidia extructa W1219 RepID=D2MQI5_9FIRM Length = 694 Score = 678 bits (1750), Expect = 0.0, Method: Composition-based stats. Identities = 227/705 (32%), Positives = 337/705 (47%), Gaps = 37/705 (5%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL--------KA 62 L F Y + ++ G R VPFGK + R+ V S+ + L L K Sbjct: 14 SLDHLFTYG--SSVPIERGIRCYVPFGKSR-RMAFV-DHSEEYDGTLESLSQKLGYPVKE 69 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + ++LD EP+ ++ L LW + + R + E Sbjct: 70 IQQILDEEPLLNQELYDLALWLKEKTLSTTIACFQVMMTNKKRVKGKVKSV------VLE 123 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 Q V S S KQ Q L +++ ++ + ++ L KG+ + E Sbjct: 124 QIIEVADESFSLSVKQAQCLRYVQEHTPISYTELRKKY-PSIVKTLLNKGVF--IKKAQE 180 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + LN EQ A I LL G TGSGKTEVYL + + + Sbjct: 181 RLSFLQAEQEVQPLKVLNQEQTKAYQLIQRKEG---VHLLYGQTGSGKTEVYLHLAKKAI 237 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 +GKQ L++VPEIGLTPQ + R F + + HSGLN+ ER + K G +++G Sbjct: 238 EEGKQVLILVPEIGLTPQMVNRVSRVFGQDLGMYHSGLNEQERYEQYQLVKQGRLKVIVG 297 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSA+F PF+ LG+IV+DEEHDSSYKQ YH RD+AV RA P++LGSATP+LE Sbjct: 298 TRSAIFLPFQKLGLIVLDEEHDSSYKQDVQPSYHCRDVAVERAGFHHCPLVLGSATPSLE 357 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA---GLAPALITRMRQHLQADN 419 + + Y+++ L R G A HV+D+ + Q L+ L R+ + L+ Sbjct: 358 SYAKALKGVYQMVSLKTRFGQ-DMAKVHVVDMSQEIRQGKDYILSDELKQRLTEVLRKKE 416 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q IL LN+RG++ L C C + CP CD + H ++CH C + V R+CP C Sbjct: 417 QAILLLNKRGYSRLLRCKSCQEVLTCPHCDLALSYHADCQKMKCHSCGYEMKVLRRCPHC 476 Query: 480 GSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 GS H G GT++L + + FP I R+D D T RK A + L A IL+G Sbjct: 477 GSEHGFSGYGFGTQRLCEEVQKEFPKSRILRMDFDNTQRKNAHRKILESFGNHKADILVG 536 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQM+AKG FP+VTLV +L+ D L +D+RS E L Q AGR+GR K+G V+ Q Sbjct: 537 TQMVAKGLDFPNVTLVGVLNADDGLQRSDYRSGEHTFDLLMQAAGRSGRGEKKGTVIFQV 596 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 ++P H ++ + + Y++F +Q + R + + PP+TS V E + + + Sbjct: 597 YNPTHFAIRFAIEQDYESFFKQEMVYRHLAKYPPYTSFVSFTFEGRKEEKVREIAENFQQ 656 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH 703 I + LG A K+ +R++I+++ L Sbjct: 657 EIAKICFS------LGV--AALLKKQDLYRYRIVVKEKYLENLLK 693 >UniRef50_C7PM74 Primosomal protein N' n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PM74_CHIPD Length = 815 Score = 677 bits (1748), Expect = 0.0, Method: Composition-based stats. Identities = 236/818 (28%), Positives = 361/818 (44%), Gaps = 95/818 (11%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+ LP+ + Y +P M +KAG RV V GKQ++ GIV ++ + + Sbjct: 1 MKFADVILPLALPKNYTYAVPPHMEESLKAGSRVAVQLGKQKKYAGIVKAIHEQAPAD-Y 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K ++++LD +PV + W A YY G+VL ALP L+ + Sbjct: 60 RTKPLLDMLDKDPVVYPTQLSFWQWLASYYMCTEGEVLNAALPAHLKLSSETLLLFNDAY 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ--------------VATLEFNDAA 164 D + + ++ L I + E Sbjct: 120 GDDFSNLDDDEYLVAEALNIRKELRIDEVQLILDKADVYSTIKKLIEKNVLLVYEELKEV 179 Query: 165 LQALRKK--GLCDLASETPEFSDWRTNYAVSGERLRLN-------TEQATAVGAIHSAAD 215 + ++ L + + A + +++ L Q + + + Sbjct: 180 YKEKKENYVQLHTQYEDEELLAPLFNELAKAPKQMELLLAYLHLIKTQGSVLQSELLKKS 239 Query: 216 TFSAWLLAG----------------VTGSGKTEVYLS-----VLENVL------------ 242 + L G V G GK E + E L Sbjct: 240 GATTAQLKGLVDKNILWIEKRVVDRVPGGGKVEAQIDFKLSPAQEKALAEVRNSFAAKPV 299 Query: 243 -------AQGKQALV----------------MVPEIGLTPQTIARFRERFNAPVEVLHSG 279 + GK L ++PEI LT Q + R ++ F + + HS Sbjct: 300 TLLHGVTSSGKTQLYVKLIEEYVAMGKQVLYLLPEIALTAQIVRRLQKHFGNKIGIYHSR 359 Query: 280 LNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHAR 338 N++ER+ W K KNG+ I++G RS+L PF++LG+I++DEEHD SYKQQ+ RYHAR Sbjct: 360 FNNNERVEIWNKVKNGDLKILLGARSSLLLPFQDLGLIILDEEHDPSYKQQDPAPRYHAR 419 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 D A+Y A + ++LGSATP+LE+ N QQ KY L+ L+ R G ++D+K ++ Sbjct: 420 DAAIYYAGLFRAKVLLGSATPSLESYFNAQQGKYGLVELSERFGGLEMPEIAIVDVKKER 479 Query: 399 ----VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 +Q P L + + A NQVILF NRRG+AP L+C CGWI C CD T Sbjct: 480 AEKSMQENFTPQLNAAINNSVAAGNQVILFQNRRGYAPFLMCATCGWIPSCKNCDVSLTY 539 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ Q L CH+C ++ P P+ C +CGS L P GTE++E L LFP I+R+D D Sbjct: 540 HKNQDKLHCHYCGTRYPYPQTCAACGSQTLNPKSFGTEKIEDDLQQLFPKARIARMDMDA 599 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 K + + + + + IL+GTQM+ KG F +V LV +L D L DFR ER Sbjct: 600 VRNKDSHNKMIQLLEQRDIDILVGTQMVVKGLDFDNVNLVGILSADSLLSFPDFRVNERA 659 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL QV+GRAGR +G+V++Q + HP+L + Y A +AER PP+T Sbjct: 660 FQLMEQVSGRAGRKHGKGKVIIQASNTRHPVLSYVTTHDYKAMYVAEIAERENFSYPPFT 719 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + + N Q Q L N + ++GP L + + ++L++ Sbjct: 720 RLLKITLKHKNQQTVEQAAQVLGNWLR----PHIGARLVGPAIPLVGRVRNNYLQEMLIK 775 Query: 695 HPSRVRL----QHIINGTLALINTIPDSRKVKWVLDVD 728 P ++ + ++ + R V V DVD Sbjct: 776 LPRDSKVIADTKRMVQEHFIRLLAEKQFRSVFIVPDVD 813 >UniRef50_A6NUS5 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NUS5_9BACE Length = 839 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 228/825 (27%), Positives = 356/825 (43%), Gaps = 102/825 (12%) Query: 3 VAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASELP 56 +A VAL + + +DYLLP+ + + G RV +PFG RI GI++++ Sbjct: 21 LAKVALSAATFAIDKPYDYLLPDELRESASPGMRVLIPFGAGNRRIEGIILALGQGQ--R 78 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 +LKAV+ +LD PV +L LW + Y + + LP L + Sbjct: 79 NAKLKAVIALLDDNPVLDSESIQLALWMRERYFCTVYEAARAMLPAGL---YFSLQDQYH 135 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA------------- 163 ++ A + ++ LA G Q+ Sbjct: 136 IVEGVDKETAYEAAGRSEHARRILDLAYACGGTAEMGQIRGAFGTKDPNPAIRLLTERGI 195 Query: 164 -ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 L+ +G+ D + + R AV + SA S+ + Sbjct: 196 LTLETSASRGVGDKTEQVVSLAVPPEEALALTAPKRKTAPLRYAVVELLSAIGQASSKEI 255 Query: 223 AGVTG-----------SG-----KTEVYLSVL---------------------------- 238 TG SG K EV+ Sbjct: 256 CYFTGASPATLRSLVKSGLVVMEKREVFRRAAPEQGEPAAPVVLNEEQTAAFEGIDKLCA 315 Query: 239 -------------------------ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPV 273 + L +G+ A+V+VPEI LTPQ + F F + Sbjct: 316 AGKSAAALLYGVTGSGKTQVYIRLIQETLKRGRSAMVLVPEIALTPQLLHIFTSHFGDAI 375 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 VLHS L ER W + + G+A +VIGTRSA+F P +NLG+IV+DEE + +YK + Sbjct: 376 AVLHSSLRTGERYDEWKRVRAGKARVVIGTRSAVFAPLQNLGLIVLDEEQEYTYKSENVP 435 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 RYHARD+A +R ++LGSATP++E++ + Y L L R ++D Sbjct: 436 RYHARDVAKFRCARSGGVLLLGSATPSVESMYLAKTGVYHLFTLRSRYNTRALPQVRIVD 495 Query: 394 LKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 +K + ++ L ++ +L+ Q ILFLNRRG + C +CG + CPRC Sbjct: 496 MKRELRGGNGSDISQQLREELKANLERGEQSILFLNRRGNSRMAACGECGEVPSCPRCTV 555 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 Y T H A L CH+C +P CP CG +G GT+++++ L LFPG + R+ Sbjct: 556 YLTYHSANGRLMCHYCGHSERLPDACPHCGG-SFHFIGTGTQKVQEELEALFPGSEVMRM 614 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 D DT S + E+ L+ + IL+GTQM+AKG F +VTLV ++ D +L+ D+R+ Sbjct: 615 DTDTVSAVQSHEKLLSRFEKEKVPILVGTQMVAKGLDFENVTLVGVISADLSLYVDDYRA 674 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 ER L TQV GRAGR K G ++QT PE+ ++ T + YD F +Q + RR+ Sbjct: 675 GERTFSLLTQVVGRAGRGEKTGRAIIQTFTPENEVITTAATQDYDTFYQQEITMRRVRGC 734 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS----SPLADEKLWVLGPVPALAPKRGGR 686 PP+ ++ A +LR + S + +LGP PA K R Sbjct: 735 PPFRDLFVLTASGTEESRVLRMCVRLRRTLESWFADPAYQGLDVQLLGPAPASVAKVNNR 794 Query: 687 WRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 +R+++ + + ++ ++ L + + R V DVDP++ Sbjct: 795 YRYRLTISGHNSKTMRALVAALLCAAHNDKEMRGVSVFADVDPMD 839 >UniRef50_A5TU64 Primosomal protein N prime n=10 Tax=Fusobacterium RepID=A5TU64_FUSNP Length = 766 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 208/781 (26%), Positives = 369/781 (47%), Gaps = 67/781 (8%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + + Y + + G V VPF + ++ G ++ + ++ Sbjct: 1 MQYFDIYID-SMKGIYTYS-DKNDEFEVGENVIVPF-RNIKKSGFIIRKNLKESFE-FKV 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA------- 113 + + + ++ +L+ W DYY V+ +P ++ Sbjct: 57 LNISSKVKNSLKLSNEQIKLIEWMVDYYLASYDSVIKAMIPKKIKISYNNIYIINLDRLN 116 Query: 114 ---------------------------------------PMWYWFATEQGQAVDLNSLKR 134 ++ + K Sbjct: 117 ILSEYLDNEIINHIFSLATISYNTVKSKFKKPIIDNLINKVFLYKDANNICVNMEKFFKL 176 Query: 135 SPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTN--YAV 192 + ++ + I + + +F ++ L +K + + + E D+ ++ V Sbjct: 177 KEENKEIFEYFYKKTIIKKEKLEEKFKKNDIKELEEKEILKIEASISEKKDYSSDNIEKV 236 Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 S + LN +Q I + + +LL GVTGSGKTE+Y+ +++ +G ++ +V Sbjct: 237 SKNKSLLNEKQLAIKENIEKSIKKY--FLLKGVTGSGKTEIYIELIKKAFFEGYGSIFLV 294 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQ + RF+ F + +LHS LND ER W G+ IV+G RSA+F+P K Sbjct: 295 PEISLTPQMVERFQSEFKNNIAILHSSLNDIERAKEWESIYTGKKKIVLGVRSAIFSPVK 354 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NL I++DEEH+++YKQ RY+A+ +A+ R E +ILGSATP++E+ + Y Sbjct: 355 NLKYIILDEEHEATYKQDSSPRYNAKYVAIKRCLDEDAKLILGSATPSIESYYYAKTGIY 414 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 LL L R GNA+ V+D+K + + AL+ ++ L + QVIL LNR+G++ Sbjct: 415 ELLSLEDRYGNAQMPDIQVVDMKQE-DDLFFSKALLEEIKNTLLKNEQVILLLNRKGYST 473 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C DCG++ EC C + +++ + +C++C Q +C CGST+L+ G G E Sbjct: 474 YIQCKDCGYVEECDNCSIKMSYYKSTNKYKCNYCGKQIYYTGKCTKCGSTNLIHSGKGIE 533 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 ++E+ L F VP+ ++D + + K + + ILIGTQ++AKG HFP+VT Sbjct: 534 RIEEELKKYF-DVPMIKVDSELSRNKDYFSKIYKDFSDKKYSILIGTQIIAKGLHFPNVT 592 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV +++ D L DFRS E+ QL TQV+GRAGR K+G+V++QT+ PE+ +++ + Sbjct: 593 LVGVINSDIILNFPDFRSGEKTFQLLTQVSGRAGRGDKKGKVIIQTYEPENNVIKDSKEE 652 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 YD F E+ ++ R++ PP++ + + + ++ + I S E + + Sbjct: 653 NYDLFYEKEISSRKVFSYPPFSKILNIGFSSEDEARLLDISKKFYDEIKS-----ENIEL 707 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRV--RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 GP+P++ K R+R I + + + + + L N V+ V+D+DPI Sbjct: 708 YGPMPSMVYKVQKRFRMNIFAKGSKKKIDKFKLFLKRKLNEFNDTK----VRIVVDIDPI 763 Query: 731 E 731 Sbjct: 764 N 764 >UniRef50_D0MD21 Primosomal protein N' n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MD21_RHOM4 Length = 828 Score = 675 bits (1743), Expect = 0.0, Method: Composition-based stats. Identities = 257/740 (34%), Positives = 363/740 (49%), Gaps = 47/740 (6%) Query: 19 LLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPV-----F 73 LP G+ ++ +++ G +E P AV+ + P Sbjct: 103 ALPPGLEIE---------SRRRLYPG-----HPPAEPPGERAAAVLRFVAEHPGTTIRRL 148 Query: 74 THSVW----RLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDL 129 + LL + + L P + + Y Q ++ Sbjct: 149 RQELRFASYALLHRLVARGWLQLEESLEA--PRVQIKKEQHVRFAPAYRTPAAQEAVLEK 206 Query: 130 NSLKRSPKQQQALAALR----QGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSD 185 R AL ALR + +A + + A L+ L + G+ +L + S Sbjct: 207 LRGARQRALVTALQALRLEGVAEPTRAELLARADASPATLRRLVELGVLELVEKEVIRSP 266 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLA 243 + + EQ A+ I A + F +LL GVTGSGKTEVY++ L+ V A Sbjct: 267 LEAEPVPKAAPVTFHPEQQAALDRITEAIEARRFETFLLHGVTGSGKTEVYIAALKRVRA 326 Query: 244 QGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 QG+ +++VPEI LTPQT+ RFR F V VLHS ++D ER W + + G IVIG Sbjct: 327 QGRTGIILVPEIALTPQTVRRFRAHFGDEVAVLHSRMSDGERYDTWRQLRAGRYPIVIGP 386 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALE 362 RSA+ P +NLG+IV+DEEH+ SYKQ + RYHARD+AVYRA+ +LGSATP+LE Sbjct: 387 RSAVLAPLENLGLIVVDEEHERSYKQFDPAPRYHARDVAVYRAYLNGAVCVLGSATPSLE 446 Query: 363 TLCNVQQKKYRLLRLTRRAGN-----ARPAIQHVLDLKGQKVQAG--LAPALITRMRQHL 415 + N + KY LL + RRA AR ++DL+ ++ G LAP L + Q L Sbjct: 447 SYLNARSGKYTLLEMRRRAPAVGHTPARLPSVRLVDLRHTRLVNGNPLAPPLARAIAQRL 506 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + QVIL NRRGFAP L C +CGW CP C T H+ QH LRCH+C P Sbjct: 507 ERGEQVILLQNRRGFAPVLECAECGWSPHCPHCSVTLTYHKVQHQLRCHYCGYATRHPGT 566 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C CG+ L P+G+GT+++E+ L LFP + R+D DTT + A + L RG A I Sbjct: 567 CRQCGAAALEPLGIGTQRVEEALRALFPEARVLRMDLDTTRGRRAHHRLLDRFARGEADI 626 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+AKG FP VTLV +++ D L DFR+ E QL QVAGRAGRA + GEV+ Sbjct: 627 LLGTQMVAKGLDFPRVTLVGVVNADTGLLLPDFRADEHTFQLLMQVAGRAGRADRPGEVL 686 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 LQT +P+H + + LL Y A + LAER + PP+ ++ + + Sbjct: 687 LQTRNPDHRVFRYLLRHDYAGLARELLAERHQLGYPPYARLAVLECSGPDEARVAELARS 746 Query: 656 LRNLILS---SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV---RLQHIINGTL 709 + LGP PAL + GR+R+ +L++ P R LQ ++ L Sbjct: 747 WTEHFQQVCHQHAGGHLIDTLGPTPALHERLKGRYRYHVLVKVPRRTGAPPLQPLLRQAL 806 Query: 710 ALINTIPDSRKVKWVLDVDP 729 P R + LD+DP Sbjct: 807 ETF--PPLPRAYRLTLDIDP 824 Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 86/234 (36%), Gaps = 15/234 (6%) Query: 3 VAHVALPVPLPRTFDYLLPEG--MTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 + VALP+PL + F Y +P V+ GCRV VPFG++ G+VV LP Sbjct: 7 IVQVALPLPLLQVFSYRVPPEWREAVRPGCRVLVPFGRRH-LTGVVVPELPPDPLPSPLK 65 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 +++VLD P T + RL W ADYY G+V+ ALP L + Sbjct: 66 -PILDVLDDTPALTDELLRLTRWMADYYVCGWGEVIRAALPPGL---------EIESRRR 115 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS-- 178 G +R+ + +A I R + + A L L +G L Sbjct: 116 LYPGHPPAEPPGERAAAVLRFVAEHPGTTIRRLRQELRFASYALLHRLVARGWLQLEESL 175 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 E P + + R Q + + A L + G E Sbjct: 176 EAPRVQIKKEQHVRFAPAYRTPAAQEAVLEKLRGARQRALVTALQALRLEGVAE 229 >UniRef50_B6J9B5 Primosomal protein N' n=6 Tax=Coxiella burnetii RepID=B6J9B5_COXB1 Length = 662 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 279/573 (48%), Positives = 379/573 (66%), Gaps = 11/573 (1%) Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 E +L L ++G ++ + E + + L LN Q AV I ++ F Sbjct: 99 EIILGSLPRLFRQGKTIISEKIEELNQ------AAPPSLELNEYQQNAVNQIMASKG-FQ 151 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +LLAGVTGSGKTEVYL +E ++ Q KQAL++VPEIGLTPQT+ RFRERFN P VLHS Sbjct: 152 TFLLAGVTGSGKTEVYLRCIEKLIQQEKQALILVPEIGLTPQTLNRFRERFNVPTAVLHS 211 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 L D +R AW+ AK G A IVIGTRSA+FTP N G+I++DEEHD+S+KQQ G+RY AR Sbjct: 212 SLTDKKRAQAWMMAKRGTAKIVIGTRSAIFTPLLNPGIIILDEEHDTSFKQQSGFRYSAR 271 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 DLAV R E IP++LGSATP+LE+L NV++++Y+LL L RAG A+ ++DL+ +K Sbjct: 272 DLAVMRGQFENIPVVLGSATPSLESLYNVERRRYQLLSLPGRAGKAKLPSLTIVDLRQKK 331 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + AG++ L+ + +H++ QV+LFLNRRG+AP LLCH CGW+ C RCD TLH Sbjct: 332 LIAGMSEDLLISIEKHIKNKGQVLLFLNRRGYAPTLLCHGCGWVMHCDRCDARLTLHHFP 391 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 L CHHC + + +P CP C L+ VGLGTE+LE L FP I RIDRD+T K Sbjct: 392 KRLYCHHCGAAKKIPPTCPQCHQQELIDVGLGTERLEAALQQRFPNDDIVRIDRDSTRTK 451 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 ++E +L +H A ILIGTQM+AKGHHF +TLVA++D D L+SADFR+ ER QL Sbjct: 452 NSMENKLNLIHNREAPILIGTQMIAKGHHFSHLTLVAIIDADSGLYSADFRATERMGQLL 511 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 TQVAGRAGR +QGEV++QTH P +P L LL +GY+AFA+ L ER++ QLPP+T + Sbjct: 512 TQVAGRAGRVDRQGEVLIQTHQPNNPFLTLLLQEGYEAFAQALLKERQLAQLPPFTYLAL 571 Query: 639 VRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR 698 +R E FL +++ L+++ E++ +LGPVPA ++ GR+R+Q+L Q R Sbjct: 572 LRTEAVKQNLPLDFLTKIKELMVNEL--KEEVDLLGPVPAGMERKAGRYRYQLLFQSKHR 629 Query: 699 VRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 L ++N ++L+ T KV+W LD+DP E Sbjct: 630 KHLHSVLNKLISLLATQRT--KVRWSLDIDPQE 660 >UniRef50_Q0AXL2 Replication restart DNA helicase PriA n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXL2_SYNWW Length = 802 Score = 675 bits (1741), Expect = 0.0, Method: Composition-based stats. Identities = 243/806 (30%), Positives = 372/806 (46%), Gaps = 83/806 (10%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASEL 55 M V + +P L T+ Y++P + + G RV V G ++ V + D E+ Sbjct: 1 MLGVRVLINLPAMSLDHTYTYIVPPALKEEIAVGKRVLVELGNRKVE-AFVSEILDEGEI 59 Query: 56 PLNEL---KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 N + K V++VLD EP+F H+++ L W AD Y P+ VL P LLR+ + Sbjct: 60 DGNAIAAIKPVLKVLDREPLFDHNLFILAEWMADTYLCPLSLVLKLMTPRLLRKKKAVKV 119 Query: 113 APMWYWFATEQGQAVDLNSLKRSP----KQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 P E ++ + + Q+ L K +Q ++ + Sbjct: 120 TPALKREEIELWRSRLIAQRENDFLDLLLQRGELTLYEAKKFLNNQEIKALVDENLIYLS 179 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLR-LNTEQATAVGAIHSAADTFSAWLLA---- 223 + + + A L QA A+ I + LL Sbjct: 180 GNYSSQRVEKSGYVYVLKNFDLARDLPALEKAAPRQAEAIR-IIAKEQEVDCILLEQLIP 238 Query: 224 ------------------GVTGSGKT-------EVYLSVLE------------------- 239 V S K E +E Sbjct: 239 ARSVKSLLEKGYIERQKKKVIVSDKKLQLNREQEAAFRSIEKSLIKADREEFLLFGVTGS 298 Query: 240 -----------NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 V+ QG++A+V+VPEI LT +A F R + V+HS + D ER Sbjct: 299 GKTEIYIRSVEKVIEQGRKAIVLVPEIALTRHLLADFSSRI-ENMAVMHSAMPDGERHDE 357 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W + + GE +V+GTRSA+F P LG+I+IDEE +SSYKQ+E +YHARD+A RA + Sbjct: 358 WRRIRQGEVDLVLGTRSAIFAPLDQLGLIIIDEEQESSYKQEETPKYHARDVARKRAELD 417 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAP 405 +++GSATP+L+TL + +LL L +R A+ I V ++K L+P Sbjct: 418 GAVLLIGSATPSLDTLYRAVKGDMKLLTLKQRIAQAKMPIIQVENMKKVASSHKSRVLSP 477 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 L+ ++ LQ Q ILF+NRRG++P LC CG I CP C T HQ CH+ Sbjct: 478 LLLEKLSTTLQRGEQSILFINRRGYSPLSLCRSCGNILSCPSCSVGMTYHQDMGKNLCHY 537 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C+ Q P CP CGS H+ +GLGT+++E+ LFP I R+D D++ + G E L Sbjct: 538 CNYQANPPSSCPICGSRHMSHMGLGTQRVEEECRQLFPSAHIQRLDLDSSKKAGFQESIL 597 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 + R ILIGTQM+AKG +FP V+LV ++D D L DFR+AER QL Q AGR+ Sbjct: 598 ERMERKEIDILIGTQMVAKGLNFPSVSLVGIVDADSMLNLPDFRAAERCIQLLLQAAGRS 657 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR+ GEV++QT +P +PL + + Y AF Q + +RR++ PP+T + + + Sbjct: 658 GRSHLPGEVIIQTFNPANPLFSMIQKQDYLAFFYQEIKQRRLLNYPPFTQLLRIVCSAQS 717 Query: 646 NQHAPLFLQQLRNLILS-SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 A + + L I ++ + +LGP P K R+RWQ+ L+ + + L+ I Sbjct: 718 LDMARMVAESLSREINDIIDAKEDDIEILGPAPCPLLKIRNRYRWQLTLKCENMLLLKSI 777 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 + + + V+ D++P+ Sbjct: 778 ARYIIEY----KEFKNVRVEWDLNPV 799 >UniRef50_D1VSE7 Primosomal protein N' n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSE7_9FIRM Length = 781 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 223/780 (28%), Positives = 371/780 (47%), Gaps = 80/780 (10%) Query: 12 LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP-LNELKAVVEVLDSE 70 + + Y+ + + +K G RV V FG R+GIV+ + P L++LK +++VLD+E Sbjct: 14 IDNLYTYIFDKDIYLKPGMRVMVSFGNG-TRVGIVLKIYSTYNGPYLSKLKNIIDVLDAE 72 Query: 71 PVFTHSVWRLLLWAADYYH---------------------------HPIGDVLFHALPIL 103 P+ + + L LW D Y +P G L I Sbjct: 73 PIISEDLIELGLWMKDRYLLGYSKAFAPLLPPGDLKKIKKSVNIKKYPYGQDLEDLKKIN 132 Query: 104 LRQGRPAAN----------------------------APMWYWFATEQGQAVDLNSLKRS 135 L + + Y + L L + Sbjct: 133 LDKLYEDMDSNMKNLCNKLYKKGILKFSYLPITSIKIKTEKYLKKSNNFSMEKLQGLTKR 192 Query: 136 PKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 Q ++ + + L+ + ++AL KK L + + G Sbjct: 193 QSQAVNYIIEKKDVSKKLLMKELKMSSTPIEALIKKDLVTEFDREVKTD--KKYVGKVGT 250 Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEI 255 LN EQ A+ +I +L G+TGSGKTEVYL++ + L +G+ +V+VPEI Sbjct: 251 NHTLNEEQEDAIRSIEGT--KKEVSILYGLTGSGKTEVYLNLAKIALDRGEDVIVLVPEI 308 Query: 256 GLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLG 315 GLT Q I RFR +F V ++HS L+ +R + K NG+ IV+G RSA+F PF N Sbjct: 309 GLTSQMIERFRNKFQDDVAIIHSKLSKGQRYEEYRKILNGDVHIVVGVRSAVFVPFTNCS 368 Query: 316 VIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 +I++DE HDSSY + +Y + ++A+ R ++ ++LGSATP + QQ KY L Sbjct: 369 LIILDEFHDSSYTFHDSLKYDSIEVAIKRMENKG-KVVLGSATPDISHYYLAQQGKYNLS 427 Query: 376 RLTRRA-GNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFA 431 L RA +R ++D++ + + + AL ++++ L + Q+ILFLNRRGF+ Sbjct: 428 CLKNRAFHGSRLPDTKIIDMRKELLMGNLSIFSRALKDKIKEKLDKNEQIILFLNRRGFS 487 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 + C CG + +C CD T H+ + L CH+C + +P+ CPSCGS ++ GLGT Sbjct: 488 NFVSCRTCGHVIKCDNCDISMTYHKTNNRLICHYCGYTKSLPKICPSCGSKYIKQFGLGT 547 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 +++E+ + FP I R+D+DTTS+K + E + ++IGTQM++KG FPDV Sbjct: 548 QKVEEEVKKFFPNARILRMDKDTTSKKDSYENYYHMIKNKEVDVIIGTQMISKGFDFPDV 607 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 TLV ++ D +L+ + ++S+E QL TQV+GRAGR+ K+G+V++Q+++P H + Sbjct: 608 TLVGVIASDISLYISSYKSSEDTFQLITQVSGRAGRSYKKGDVIIQSYNPNHYAIMYAAD 667 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ----LRNLILSSPLAD 667 Y+ F ++ L ERR PP++ + + + A + + +I + + Sbjct: 668 NSYEGFYKEELEERRTFLYPPFSKIINLEFSSVYEKLAIKWANAYLYNIGKIIGNLDVQA 727 Query: 668 EKLWVLGPVPALAPKRGGRWRWQILLQH--PSRVRLQHIINGTLALINTIPDSRKVKWVL 725 K+ L PK +R L+ L ++ + I+ I D + + + Sbjct: 728 TKIIKL-------PKIKNMYRIHFSLKVFPQDEQMLLKVLRRVIN-ISKINDKKDIDLNI 779 >UniRef50_Q6AL40 Related to primosomal protein N' (PriA) n=3 Tax=Bacteria RepID=Q6AL40_DESPS Length = 866 Score = 672 bits (1734), Expect = 0.0, Method: Composition-based stats. Identities = 211/589 (35%), Positives = 309/589 (52%), Gaps = 8/589 (1%) Query: 150 IWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGA 209 RD + AL L ++GL + + + L+ EQ A Sbjct: 277 PRRDLLRLYPGAAKALVYLEERGLVERFQRRVFRNPFGDTLPFFPRIEELSPEQEEACSE 336 Query: 210 IHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRE 267 I + F+ +LL G+TGSGKTEVYL E +A+G+ LV+VPEI L Q A F Sbjct: 337 IKKTIEGEIFAPFLLYGITGSGKTEVYLRSAEEAIARGRDVLVLVPEIALATQLEAYFVS 396 Query: 268 RFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSY 327 RF V + HSGL SE+ W A +G A IVIG RSA+F P KN+G+I++DEEHD + Sbjct: 397 RFGDLVVLQHSGLKASEKYDQWSLALSGRAKIVIGARSAIFAPLKNVGLILVDEEHDGGF 456 Query: 328 KQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPA 387 KQ + +RY+ARDLAV RA ++LGSATP++ + + + KYRLL + R G+ Sbjct: 457 KQDDSFRYNARDLAVLRAKYHSATVVLGSATPSVTSFYHAKSGKYRLLTMKNRIGSRTLP 516 Query: 388 IQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIA 443 V+DL KG+K + P L T +++ L Q IL +NRRGF+ +LC DCG I Sbjct: 517 RVRVIDLNTRDKGKKKKGIFQPPLQTALKEVLAQGKQSILLMNRRGFSAIVLCRDCGEIV 576 Query: 444 ECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFP 503 C RC+ TLH+ L CH+C P C SCG ++VPVG GTE++E+ + L P Sbjct: 577 SCKRCNVSLTLHRHSKKLVCHYCGFSLPEATVCRSCGGANIVPVGFGTERVEEEVQKLLP 636 Query: 504 GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGAL 563 ++R+D DT + + L ++ G +LIGTQM+AKGHHFP V LV ++ DG + Sbjct: 637 EARVARLDSDTAGNREHFLKILQKMRDGQIDVLIGTQMIAKGHHFPGVVLVGVVWADGGM 696 Query: 564 FSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALA 623 DFR+AE+ QL +QV GRAGR G+V +QT P+H + Y AF E ++ Sbjct: 697 SLPDFRAAEKTYQLISQVTGRAGRGDSPGKVFIQTMRPDHYAIAFARNHDYQAFYEHEIS 756 Query: 624 ERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE-KLWVLGPVPALAPK 682 R+ PP+ + N + N + ++ +LGP PA + Sbjct: 757 LRQNPLFPPFVRLIAFHIRGENEGQVKNSAGNIANFCRRENRDKKLQVDILGPAPAPIDR 816 Query: 683 RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 +RWQ+L++ +L + + + + ++ + ++DVDP Sbjct: 817 IKDSYRWQVLIKGSCYEKLHTLCHRVESAGKELLLAK-ITMIIDVDPEN 864 Score = 93.0 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 72/351 (20%), Positives = 119/351 (33%), Gaps = 61/351 (17%) Query: 4 AHVALPVPLPRTFDY---------LLPEGMTVKAGCRVRVPFGKQQERIGIV------VS 48 VAL +P+ + Y M G RV VP +Q I+ V+ Sbjct: 17 VEVALALPVNQILTYSLRGVDTGGRSDAHM---LGMRVLVPLSGRQATAYIINILREKVA 73 Query: 49 VSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 + E ++++++ LD +F ++ W +DYYH+P+G V+ ALP L Q Sbjct: 74 CPEGREEKKYKIRSILRFLDKGALFHSNMLPFFKWISDYYHYPLGLVIKSALPGGLTQKT 133 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 + + ++ P Q + L + + E + L Sbjct: 134 VSVIKRGEA----PWDEKKLAGLIQEMPDWLQRVCQLGKLSFAESRSLLKESKNRTLLTK 189 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIH---SAADTFSAWLLAGV 225 ++ + R + L L + + + S + F LL+ + Sbjct: 190 LEELGLVQIGQEQVGDSVREKNEICYHLLGLALDIDSLQAELSPETSQIEEFRQSLLSSI 249 Query: 226 TG-----SGKTEVYLSVLEN-------------VLAQG-KQALVMVPEIGLTPQTIAR-F 265 TG KT YLS L + L G +ALV + E GL + R F Sbjct: 250 TGKMLFSEAKTLYYLSYLAHKNNSTDVPRRDLLRLYPGAAKALVYLEERGLVERFQRRVF 309 Query: 266 RERFNAPVEVLHS--GLNDSERLSAWLKAK---NGEAAIVIGTRSALFTPF 311 R F + L+ E+ A + K GE +F PF Sbjct: 310 RNPFGDTLPFFPRIEELSP-EQEEACSEIKKTIEGE----------IFAPF 349 >UniRef50_A6GL59 Primosomal protein n n=1 Tax=Limnobacter sp. MED105 RepID=A6GL59_9BURK Length = 680 Score = 671 bits (1733), Expect = 0.0, Method: Composition-based stats. Identities = 276/729 (37%), Positives = 391/729 (53%), Gaps = 53/729 (7%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 +V + PLP+ F Y T + G RV VP+G+Q RIG+V + ++ N +K V Sbjct: 2 NVLVAAPLPKAFTYQWHSEHTPRFGMRVIVPWGRQH-RIGLVQGAAPDQQMAEN-IKPVH 59 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 VLD + L+ +AA YYHHP+G + ALP LR P+ + E Sbjct: 60 SVLDHGECLSAHWQALIEFAAKYYHHPLGMIALEALPKALRVLNARGEEPVMVAKSREHA 119 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 Q K ++ LAA + GK DQ+ Sbjct: 120 Q-------KLLAERNDPLAASKGGKAKIDQL----------------------------- 143 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 E+ LN EQ AV + SAA F +LL GVTGSGKTEVYL +E L + Sbjct: 144 ----------EKPVLNAEQLDAVAQLSSAAG-FQPFLLYGVTGSGKTEVYLHTVEERLKR 192 Query: 245 GKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGT 303 G+Q LV++PEI LTP A ++ER V V+HS L + R AW +A G A ++I T Sbjct: 193 GEQVLVLLPEINLTPAAQALYKERLAPHRVVVMHSNLAELTRTKAWFEAATGAADVIIAT 252 Query: 304 RSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALET 363 R + TP LG+IV+DEEHD SYKQQ+G RYHARDLA+ A ++PI+LGSATPALE+ Sbjct: 253 RLGVLTPLPRLGMIVVDEEHDPSYKQQDGMRYHARDLALMLAKQREVPIVLGSATPALES 312 Query: 364 LCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 Y+ L L RA A +++ + GL+ + + Q+ +A Q I Sbjct: 313 WLKADLGAYKRLSLKNRAVLGASLPKVELINTANFPAKEGLSEPAMQALVQNFEAGKQSI 372 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 +FLNRRG+AP ++C+ CGW+A C C + H+ + LRCHHC + + VP CP+CG+ Sbjct: 373 VFLNRRGYAPQMVCNACGWVANCDHCTAHMVWHKNERMLRCHHCGAGQRVPTHCPTCGNQ 432 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L G GT+++E+TLA L P I RID D+T KG +E L + H G A +L+GTQM+ Sbjct: 433 DLTGFGRGTQRIEETLAGLLPTANILRIDADSTRNKGQMEALLQQAHSGEADVLVGTQMI 492 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGH F +VTLV L+VD +L+S +R+ ER QVAGRAGR +V+QT +P+ Sbjct: 493 AKGHDFANVTLVLALNVDASLYSHAYRAPERLFAQLMQVAGRAGRRAGDARMVVQTRYPQ 552 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPL L Y++FA + R+ ++PP++ +RA+ + FL R L Sbjct: 553 HPLFDALKAHDYESFASHEMQARKDARMPPFSHQATIRADHKKLANCLQFLSTARELGEP 612 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 AD +++ PVP + GG R Q+L++ SR L + LA ++ +P S V+ Sbjct: 613 LVDADNPVFMCDPVPLTVVRVGGIERAQMLIESESRPALHRFLTQWLAQLHELPGS--VR 670 Query: 723 WVLDVDPIE 731 W L+VDP++ Sbjct: 671 WFLEVDPVD 679 >UniRef50_C8WW75 Primosomal protein N' n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WW75_ALIAD Length = 805 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 249/800 (31%), Positives = 370/800 (46%), Gaps = 79/800 (9%) Query: 2 PVAHVALP---VPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 VA V + + L + FDY++P GM V G RV VP + R GIV +V + + + Sbjct: 7 RVAEVVVDGTALFLDKRFDYIVPPGMDVSPGVRVVVPM-RDSVRSGIVWAVREVANVGG- 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVL-------------FHALPILLR 105 L+ + V+D PV T R+ W D Y + + + +P Sbjct: 65 -LRPLARVIDRVPVLTPHQMRMAEWLCDRYAATLPEAVSAILPGAFRVRVRKVIVPSADA 123 Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA--------- 156 A + F E + ++ A A G + + Sbjct: 124 PVPDDVKASTLFRFIAESEPEWSEIRARSKADERAARAWAEAGFVREELRVDEAVGEKRR 183 Query: 157 ------------------------------------------TLEFNDAALQALRKKGLC 174 + +++ L + GL Sbjct: 184 AYLVTRASEVDLRREAERRSRRARRQSELLLHLAEAGEMPWDRRAYPLSSVAPLIEAGLV 243 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS-AADTFSAWLLAGVTGSGKTEV 233 +A + + + L Q AV A+ A LL GVTGSGKTEV Sbjct: 244 AVAERRVKRAP--ASLDAEEPWPELTPYQVAAVRALAEMARQGHGVALLHGVTGSGKTEV 301 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+ ++ + QALV+VPEI LTPQ + RF RF V VLHSGL+ ER W + Sbjct: 302 YMHLIRGAIEDEGQALVLVPEIALTPQLVQRFERRFGGRVAVLHSGLSLGERREEWTRVL 361 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 GEA++VIG RSA+F P + L ++VIDEEH+ SYKQ++ Y AR++A++RA ++ Sbjct: 362 EGEASVVIGARSAVFAPMRKLRLVVIDEEHEPSYKQEDAPHYDAREVAMWRAREAGALVV 421 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITR 410 LGSATP+L ++ V++ RL+ L RA V+D++ + + L Sbjct: 422 LGSATPSLASMFRVERGDARLVSLPVRANRRPLPPVDVIDMREELRAGNRSIFSRRLAAE 481 Query: 411 MRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ--AQHHLRCHHCDS 468 + + + Q ILFLNRRG+A A LC CG ECPRCD + T+H+ H L CH+C Sbjct: 482 LERTVSEGMQAILFLNRRGYAHAALCRACGHSMECPRCDIHLTVHRRADGHVLVCHYCGH 541 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + P+ R+CP+C LVP GLGTEQ+EQ L +P + + R+D DTT RKGALE + Sbjct: 542 EEPLVRRCPACAEDALVPYGLGTEQVEQHLLRTWPAMRVLRMDLDTTRRKGALESIIDRF 601 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 RG A +L+GTQM+AKG FP V LV ++ D L D+R+ ER QL TQVAGRAGRA Sbjct: 602 QRGEADVLVGTQMIAKGLDFPRVRLVGVVAADAMLTLPDYRANERAFQLLTQVAGRAGRA 661 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 G ++QT+ P H ++ Y F E+ R + PP+ + A + Sbjct: 662 ETDGITLIQTYQPGHRAIEAAKSHDYRQFYERERESREFFRYPPFCELAVFLASHSEERL 721 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 A + + SP A L VL P+ + +R+Q+++++ + ++ + Sbjct: 722 ARGAAARFERELARSPSAAS-LTVLPAGPSGIRRIDNVYRYQVVMKYAAWQDVKEDVVRA 780 Query: 709 LALINTIPDSRKVKWVLDVD 728 L+ + VLDV+ Sbjct: 781 YRLVKEKMNRLGGSAVLDVN 800 >UniRef50_Q3ASD1 Primosomal protein n n=11 Tax=Chlorobiaceae RepID=Q3ASD1_CHLCH Length = 815 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 231/643 (35%), Positives = 327/643 (50%), Gaps = 4/643 (0%) Query: 91 PIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKI 150 I + L ++ + T Q L S+ + KQ L+ L Sbjct: 171 TISQLEKGGYLTLSKKFSTKKPKYKSAYRLTAPLQDGVLESVASAKKQHATLSTLADLYP 230 Query: 151 WRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAI 210 + LE + A +Q L KGL + + E + + + +Q + + Sbjct: 231 ETAFLNELEVSHAVIQVLLNKGLVEKVQKRIESNFSSGYRESAQPAKKPTAQQQKVLNEL 290 Query: 211 HSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER 268 SA+ + +LL GVTGSGKT VY+ L+ VLA GK A+V+VPEI LTPQT RFRE Sbjct: 291 CSASRQGHYQTFLLHGVTGSGKTLVYIEFLKEVLAAGKTAIVLVPEIALTPQTAGRFREH 350 Query: 269 FNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYK 328 F+ + +LHS ++ E+ AW K+G I +G RS LF P +NLG I++DEEHD +YK Sbjct: 351 FHHDIAILHSAMSLQEKYDAWHSLKSGRCRIALGARSTLFAPLENLGAIIVDEEHDGAYK 410 Query: 329 QQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAI 388 Q RYHARD AV RA +LGSATP+ E+ N Q KY LLR+ R A Sbjct: 411 QDRSPRYHARDTAVMRAMLSNAICLLGSATPSFESYQNAQNGKYHLLRMAERIDGATMPT 470 Query: 389 QHVLDLKGQKVQA-GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 ++ ++ + ++ L ++ Q ++ + QVIL NRRGFA ++LC +CG I CP Sbjct: 471 ISLIWMRESPRRTTSISEMLYQQIAQRIEKNEQVILLQNRRGFAGSILCLECGHIPLCPH 530 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 C+ H +HLRCH+C C +C ST L G GTE++E+ L LFP I Sbjct: 531 CNIPLVYHATHNHLRCHYCGHTERYKAMCSACKSTGLFYKGSGTERIEEELQKLFPDEKI 590 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+D DTT++KGA + L E H ARIL+GTQM+AKG FP VTLV +L D L D Sbjct: 591 LRMDVDTTAKKGAHGRILREFHERKARILLGTQMVAKGLDFPAVTLVGVLMGDIGLNIPD 650 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FR++ER L QVAGRAGRA GEV++Q ++ E + LL+ Y+ F +Q L RR Sbjct: 651 FRASERTFALLMQVAGRAGRAAIPGEVLIQVYNKESDVFTALLHGDYERFFQQELESRRT 710 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 + PP + + A + ++ + + VLGP PA K R+ Sbjct: 711 LLYPPAARLIKFECSADDEVQAEAAATFCKEIVQQHLPEKQGM-VLGPAPACIAKIRNRF 769 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 R+ +L++ I I++ S V +DVDP Sbjct: 770 RYHVLVKLMLGKLSPLFIREMSDTIHSRFRSANVLLTVDVDPQ 812 Score = 64.5 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 45/227 (19%), Positives = 80/227 (35%), Gaps = 17/227 (7%) Query: 3 VAHVALPVPLPR-TFDYLLPEGM--TVKAGCRVRV-PF-GKQQERIGIVVSVSDASELP- 56 A F ++PE ++AGC V + G+ IG V+S+S + Sbjct: 2 YARCVADRFFRGEPFSLVVPEAFCEELQAGCMVLLLSLKGQGLMSIGYVLSLSPDAPPDM 61 Query: 57 LNELKAVVEVLD----SEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 +NE E++D S+PV + +L W ADYY D + ALP+ +R Sbjct: 62 VNEELPSFEMVDLLNGSQPVLNGELLKLTSWIADYYLTRPIDAIHTALPVAIRTTV-HDV 120 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 + + V +L+RS + A + ++ + + L K G Sbjct: 121 VEAAGFTLQAEPTKVMNTALRRSILKLLATNKQLTVTQLQRRLGKKQL-YKTISQLEKGG 179 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSA 219 L+ + + L Q + ++ SA + Sbjct: 180 YLTLSKKFSTKKPKYKSAYRLTAPL-----QDGVLESVASAKKQHAT 221 >UniRef50_Q2LSS2 Primosomal protein N'-superfamily II helicase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSS2_SYNAS Length = 809 Score = 670 bits (1729), Expect = 0.0, Method: Composition-based stats. Identities = 237/649 (36%), Positives = 339/649 (52%), Gaps = 16/649 (2%) Query: 95 VLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ 154 L A ++ +G + + + +Q+ +G + Sbjct: 163 ALLSANRVIAEEGLEQPEIRKKTEKVITLVAGRSVPARLSAVQQRVLSYLQEKGTACFPE 222 Query: 155 VATLEFNDA-ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA 213 + N + + L +KGL L+ S + + LN +QA A G + SA Sbjct: 223 LRPFACNPSPVVHRLMEKGLVSLSEREVYRSSEESPEMSILNDIHLNDDQAAACGELESA 282 Query: 214 AD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERF-N 270 F +LL GVTGSGKTEVY ++ L G AL +VPEIGLTPQ ++R R RF Sbjct: 283 LSSRRFKPFLLHGVTGSGKTEVYFHAIKQALNSGGGALYLVPEIGLTPQLLSRVRNRFQG 342 Query: 271 APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 + V+HS + R W + + GE +V+G RSALF P NL +IVIDEEHDSSYKQ Sbjct: 343 EEIAVIHSDIARGIRYDFWRRLQRGEIRLVVGARSALFAPLPNLRLIVIDEEHDSSYKQD 402 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQH 390 RYHARDLAV RA + I+LGSATP + T +Q KY L L RR N Sbjct: 403 VRMRYHARDLAVLRAKLQNAVIVLGSATPDMRTFYQARQGKYDCLSLPRRVENRPLPQVR 462 Query: 391 VLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECP 446 ++D+K ++ + G L+ ALIT + + L +Q + FLNRRGF L C DCG + CP Sbjct: 463 IVDMKAEREETGRIPVLSRALITALEETLNDGSQALFFLNRRGFHTFLFCPDCGTVLFCP 522 Query: 447 RCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVP 506 C TLH + L+CH+CD P CP CG + G GTE+LE+ + FP + Sbjct: 523 NCAVSLTLHAEANRLQCHYCDYAVKTPSLCPKCGGRDIQFYGAGTERLEKEILSHFPHIR 582 Query: 507 ISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA 566 +R+DRDTT+RKGA + L RG +LIGTQM+ KGH F +VTLV ++ D AL Sbjct: 583 TARMDRDTTARKGAHTRILKSFDRGEIDLLIGTQMITKGHDFHNVTLVGVIAADTALNLP 642 Query: 567 DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERR 626 DFRSAE+ QL TQV+GR GR K+G+V++QT +P+H +Q Y F E+ + R+ Sbjct: 643 DFRSAEKTFQLLTQVSGRGGRGRKEGQVIIQTINPDHFAIQRAKNHDYTGFHEEEILHRK 702 Query: 627 MMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE----KLWVLGPVPALAPK 682 + PP++ +I++ N + +++ + + + + V+GP A K Sbjct: 703 SLGYPPFSRLIILQLSSLNEERGRREVEEAGRMARAFTREESSRTMPVEVIGPAEAPIAK 762 Query: 683 RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 GR+RWQI+L+ + L + L T SRK++ +DVDP+ Sbjct: 763 IKGRYRWQIMLKSDNLQALHFLTRRLL----TSAASRKLEIKVDVDPVN 807 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 11/217 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A+ +P F Y +P+ + G R VPFG ++ G ++ + + Sbjct: 4 YVKIAINIPTESHFTYSVPQALSGDAAVGKRALVPFGARK-LTGYIIGFLSEPDFDD--I 60 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA----PMW 116 + ++++LDSEP+F+ WA+ YYH+P+G L LP + Sbjct: 61 RDILDILDSEPLFSSEDLAFYSWASSYYHYPLGKTLHDILPGGIDLKSDRLFKVAAGHKA 120 Query: 117 YWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 +GQ L+ L +PK R + A + + + Sbjct: 121 PSNPLPEGQRKILDLLGAAPKGLSLKRLRRLLSGSPIRRDLAALLSA--NRVIAEEGLEQ 178 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA 213 + T A RL+ Q + + Sbjct: 179 PEIRKKTEKVITLVAGRSVPARLSAVQQRVLSYLQEK 215 >UniRef50_Q110J1 Replication restart DNA helicase PriA n=6 Tax=Bacteria RepID=Q110J1_TRIEI Length = 914 Score = 670 bits (1728), Expect = 0.0, Method: Composition-based stats. Identities = 228/731 (31%), Positives = 332/731 (45%), Gaps = 78/731 (10%) Query: 46 VVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLL--WAADYYHHPIGDVLFHALPIL 103 ++ + S+ K + + + LL W Y L P Sbjct: 216 ILEILQNSKTKDYTWKYIQRQVKGA---ERGLKDLLQRGWVESY--------LEPPSPPK 264 Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA 163 + + Q + L++S + + T + + Sbjct: 265 PKLRQAVTLVAQTPPKDLTPRQQEVMEVLRQSGG----------EMWLTELLNTCKTTTS 314 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 ++ L +KG + + + E L + Q A+ I + F+ LL Sbjct: 315 VVKKLEEKGYAVIQEQEILRREQGRGN-TRDEIKMLTSYQTEALTTI-TKIQEFAQVLLH 372 Query: 224 GVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 GVTGSGKTEVYL + +L GK ALV+VPEIGLTPQ RFR RF V V HS L+ Sbjct: 373 GVTGSGKTEVYLQAIAPILENGKSALVLVPEIGLTPQLTDRFRARFGKKVYVYHSALSAG 432 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAV 342 ER W G I+IGTRSA+F P LG+IV+DEEHD+S+KQ YHAR +A Sbjct: 433 ERYDTWRNMTWGIPQIIIGTRSAIFAPLPKLGLIVLDEEHDNSFKQDRPAPCYHARTVAK 492 Query: 343 YRAHSEQIPIILGSATPALETL---------CNVQQKKYRL------------------- 374 +RA E P+ILGSATP+LE+ +Q Y L Sbjct: 493 WRAELENCPLILGSATPSLESWLETRKYYQDKKIQASPYLLENIDKNVSPTGNTQNLTPN 552 Query: 375 ---LRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRR 428 L L R + ++D++ Q Q + L +++ + Q ILF++RR Sbjct: 553 TYYLSLPERIHSRPMPPVEIVDMRQQLRQGNRTMFSYPLQEALQELQETKQQGILFIHRR 612 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLH----QAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 G++ + C CG + ECP CD + H A LRCH+C+ P++CP CGS Sbjct: 613 GYSTFVSCRSCGHVMECPHCDVSLSYHYTHEGATELLRCHYCNYNELQPQRCPKCGSPFF 672 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 G GT+++ Q L FPG+ R D DTT +K A L + G A +LIGTQML K Sbjct: 673 KFFGSGTQKVAQELTRQFPGLRYIRYDSDTTRKKDAHRNLLNQFANGEADLLIGTQMLTK 732 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G VTLV ++ DG L +D+R+ ER Q QVAGRAGR G V++QT+ PEHP Sbjct: 733 GLDLAQVTLVGVVSADGLLHFSDYRANERTFQTLLQVAGRAGRGDNPGRVIIQTYTPEHP 792 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 ++Q + Y++F E L R + PP+ +++R ++ + Q+L +++ Sbjct: 793 VIQAVQRNDYESFVETELQGRAELHYPPYGRLILLRLSSYDPTEVAVTAQELASVLREK- 851 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQ----HPSRVRLQHIINGTLALINTIPDSRK 720 EK +LGP PA + R+RWQILL+ + + L + N Sbjct: 852 EGKEKYDLLGPAPAPIARIANRYRWQILLKLLSGYENVPDLTQLSNFCRP---------G 902 Query: 721 VKWVLDVDPIE 731 V +DVDP+ Sbjct: 903 VSLTVDVDPMN 913 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 21/227 (9%) Query: 3 VAHVALPVPL----------PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA 52 + V + VP + F Y +P + ++ G V VPFG+QQ GI + + Sbjct: 75 LVEVLVDVPFQTSTDDAEEEEKLFTYKIPPELDIQPGDIVIVPFGRQQV-GGIAIRKTSK 133 Query: 53 SE--LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPA 110 L + LK + +++ F + W+LL A YY P+ V+ ALP L +G Sbjct: 134 LPEGLSSDRLKNISDIITKG-FFPATYWQLLEKVAIYYQTPLIKVIRAALPPGLLKGSQR 192 Query: 111 ANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRK 170 + T ++ N+ K + + + W+ ++ + L+ L + Sbjct: 193 RIRIIEAAIPTGGEIFLNANAQK---ILEILQNSKTKDYTWKYIQRQVKGAERGLKDLLQ 249 Query: 171 KGLCDLASETPEFSDW----RTNYAVSGERLRLNTEQATAVGAIHSA 213 +G + E P L Q + + + Sbjct: 250 RGWVESYLEPPSPPKPKLRQAVTLVAQTPPKDLTPRQQEVMEVLRQS 296 >UniRef50_Q1IK26 Replication restart DNA helicase PriA n=2 Tax=Acidobacteria RepID=Q1IK26_ACIBL Length = 813 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 213/581 (36%), Positives = 312/581 (53%), Gaps = 11/581 (1%) Query: 154 QVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS- 212 + + L L K+ + ++ E F ++ Q A+ I++ Sbjct: 233 EANGKPVPRSTLSTLVKRDIVEIVEEPAGFR--ISSLKPRKLEFLFTPAQQDALRFINTG 290 Query: 213 -AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA 271 + F++ LL GVTGSGKT VYLS ++ VL G+ A+++VPEIGLTP A E F Sbjct: 291 VDSGKFTSALLHGVTGSGKTAVYLSAMQEVLGAGRSAILLVPEIGLTPAVAADLHEVFGE 350 Query: 272 PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE 331 V +LHSGL+D ER W + + GE IV+GTRSA+F P +L ++++DEEHD SYKQ+E Sbjct: 351 QVAILHSGLSDDERAEQWHQIRRGEKRIVVGTRSAVFAPVSDLALLIVDEEHDHSYKQEE 410 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 RYHARD+AV RA ++LGSATP++ET N ++ KY LL L R V Sbjct: 411 VPRYHARDVAVVRAKMAGATVVLGSATPSMETYFNAEKGKYALLSLPGRVQARPLPEVEV 470 Query: 392 LDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 +D++ + + G L+ L+ + + L+ Q ++ LNRRGFA +LC CG +C Sbjct: 471 IDMRLEFQETGHESVLSRKLVEEVNERLERGEQAMILLNRRGFANFVLCRACGKTIQCRN 530 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 C T H+ L CH+C PVPR CP C S H+ G+G+E+LE+ L FP I Sbjct: 531 CAIALTFHKRDRKLMCHYCGYLAPVPRTCPECHSEHIQFFGMGSEKLEELLHGAFPKARI 590 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+DRDT + LE L +H G +L+GTQM+AKGH VTLV ++ D AL D Sbjct: 591 GRLDRDTVRGRDDLENILTALHHGEIDLLVGTQMIAKGHDIHGVTLVGVVGADAALGMPD 650 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FR+AER QL TQVAGRAGR G+V++Q++HP+H ++ + F E+ R Sbjct: 651 FRAAERTFQLLTQVAGRAGRGNTPGKVLMQSYHPDHYVVDYAAKHDFQGFYEKESRLRSW 710 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 M PP+TS V +A + + + + E + V+GP A + + Sbjct: 711 MHYPPYTSLANVLVRSDRVNNALTWSGLIGKWFET--VPHEGVRVMGPAAAPIERLKNDY 768 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 R+ +L+ SR +L ++ +A + R ++DVD Sbjct: 769 RYHFILKSRSREQLNSVLRALIAFSSAKKIPRTA-VIVDVD 808 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 14/228 (6%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VALPVPL ++F Y EG G RV VPF +QQ+ GIVV+V D+ +L Sbjct: 3 RFCDVALPVPLDQSFTYRF-EGAEPAVGVRVVVPF-RQQKLSGIVVAVHDSPPSVEAKL- 59 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 ++ VLD+EPV + L W A YY PIG+V LP+ R Sbjct: 60 -ILRVLDTEPVLNEQLLELGRWIAGYYIAPIGEVYRTMLPLNAEFRRAHGYRITERGQEA 118 Query: 122 EQGQAVDLNSLKRSPKQQQAL--------AALRQGKIWRDQVATLEFNDAALQALRKKGL 173 A +SL+ + + A + + + + + + + K Sbjct: 119 LYASAEIGSSLRAKKDTEHQMLEYAVLNHLADGEVVREQSLRSATQASREIFRTMLSKKW 178 Query: 174 CDLASETPEFSDWRTNYAVSGERLR--LNTEQATAVGAIHSAADTFSA 219 D + RT + + + +N Q + A+ +A Sbjct: 179 IDREDLSAVRDATRTVSVAALKEITGKINANQEAILLALKAAGGRLRV 226 >UniRef50_A6ECY8 Primosomal protein N' n=1 Tax=Pedobacter sp. BAL39 RepID=A6ECY8_9SPHI Length = 821 Score = 666 bits (1720), Expect = 0.0, Method: Composition-based stats. Identities = 210/677 (31%), Positives = 329/677 (48%), Gaps = 27/677 (3%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V V+++ + + + + Y P+ P + + + Sbjct: 163 KTVYPVINT--LLEKEMIYIAEEVVEKYK-PLMKSFVVINPFYQEEEHLRSLFELLEPKP 219 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + L R KQ + + ++ + L K + + Sbjct: 220 KHLNVLLTYLRLARLQKQ----------VPKHQLLEESDCSEGTFKTLLNKEIFVVNKLP 269 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + + L+ Q A I ++ + LL GVT SGKT++Y+ ++E Sbjct: 270 VSR--LKHHEDDFVLNFTLSEAQQKAFEEIGTSFEEKDVVLLHGVTASGKTQIYIKLIEQ 327 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 + +G Q L ++PEI LT Q + R + F + V HS N++ER+ W K NG+ +V Sbjct: 328 AIEKGGQVLFLLPEIALTTQIVDRIQRYFGDAIGVYHSKFNNNERVEIWNKVLNGKYRVV 387 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATP 359 +G RSA+F PF++L +IV+DEEH+ SYKQQ+ RY ARD AVY AH + I+LGSATP Sbjct: 388 LGARSAVFLPFQDLKLIVVDEEHEPSYKQQDPAPRYQARDAAVYLAHLHKAKIVLGSATP 447 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGLAPALITRMRQHL 415 +LE+ N KKY L+ L+ R G +Q V+ + + + + + LI + L Sbjct: 448 SLESYFNALMKKYGLVTLSERFGGVELPVQEVISISEETKRKKMVSYFSSKLIEEIDAAL 507 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 Q QVILF NRRG+A L+C CG+ +C CD T H+ L CH+C + Sbjct: 508 QLKEQVILFQNRRGYATILICATCGYAPKCVNCDVSLTYHKTSGKLHCHYCGYHQNSINI 567 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP+CGS H+ G GTE++E+ L+ +FP I+R+D D+T K L+Q ++ I Sbjct: 568 CPACGSVHVEQKGFGTERVEEELSLIFPDAKIARLDVDSTRTKNGLQQIISGFQEKKTDI 627 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQM+AKG F +VTL+ +++ D L DFR+ ER QL QVAGRAGR KQG+VV Sbjct: 628 LIGTQMVAKGLDFDNVTLIGVINADTLLNYPDFRAFERSYQLLAQVAGRAGRRDKQGKVV 687 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +Q + H ++ ++ Y E + ERR PP+T + V + + + QQ Sbjct: 688 IQAYDDHHRIIAQVMDNKYFEMFEDEIRERREFNYPPFTRMIFVDIKHKDMNLLNVAAQQ 747 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH---IINGTLALI 712 N++ + VLGP L + + Q++++ ++ I+ T+ Sbjct: 748 FANVLKGQLGS----RVLGPEQPLVGRVRNYYIKQVIIKSDKNTDIKKVKTILKDTIQQF 803 Query: 713 NTIPDSRKVKWVLDVDP 729 + R V +DVDP Sbjct: 804 QAQKEYRGVLVRIDVDP 820 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 79/239 (33%), Gaps = 18/239 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ L + Y +P + + G RV V FGK + ++ S+ D + + Sbjct: 11 FVEVILPLSLAINYTYRVPFELNAQVAVGKRVVVQFGKNKIYTALIRSIGDQPP-KVYQA 69 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K +++V+D PV T + W DYY G+V+ ALP L+ + Sbjct: 70 KYIIDVVDEHPVITPVQLQFWEWMMDYYICNEGEVMAAALPASLKLASETIIVLKDEIPS 129 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + ++ S K L + + + + L +K + +A E Sbjct: 130 DGEVLNAKQETILNSLKLHGRLTIDQVSG-----LLGQKTVYPVINTLLEKEMIYIAEEV 184 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 E V E ++ + LL YL + Sbjct: 185 VEKYKPLMKSFVVINPFYQEEEHLRSLFELLEPKPKHLNVLLT----------YLRLAR 233 >UniRef50_C4V0I4 DNA replication factor Y n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V0I4_9FIRM Length = 804 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 255/811 (31%), Positives = 370/811 (45%), Gaps = 91/811 (11%) Query: 1 MPVAHVALPVP---LPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVS--DASE 54 M VA V + +P + F Y++P+ + + G RV VPFGK + G VV+V DA+ Sbjct: 1 MTVADVYVNIPVKSIATAFTYVVPDALPQIDVGWRVFVPFGKVRVE-GFVVAVRPYDAAR 59 Query: 55 LPLNELKAVVEVLDSEPVFTH------------------SVWRL-------LLWAADY-- 87 + L+A++E +D E FT + RL L + Y Sbjct: 60 DGGHRLRAILEPVDEEAWFTPQLLAAAQELAAFYLCSAAEMMRLFMPGKSGLRIFSAYVP 119 Query: 88 -------------------------YHHPIGDVLFHALPIL------------------L 104 Y G L ALP Sbjct: 120 AKNVDETHPILMDAAARAVYDCLCEYGEQRGAQLRTALPACDVDGALEKLLRYGLIRKEY 179 Query: 105 RQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA 164 R R Y+ A E + + +R +++ + + ++ A Sbjct: 180 RADRRDKAKYEKYYTAGEITEELLRAFTRRPAQRRALELFRMEREHTLAELKQAGITTAT 239 Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLL 222 ++ L + + + L Q AV A+ + A +TF +LL Sbjct: 240 IRHLTDAHILTEHLRRQVRDSYAAGQRETCGE-TLTEAQQRAVAALQAGAAAETFHGYLL 298 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKT VY+ V G+Q +V+VPEI LT Q I F+E F + VLHS L+ Sbjct: 299 HGVTGSGKTRVYMETARAVRRAGRQVIVLVPEIALTGQLITAFQEGFAGDIVVLHSRLSL 358 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 +ER A + + GEA ++IG RSALFTP N+G I++DEE D SYKQ E RYHAR +A Sbjct: 359 AERNDAIFRVRRGEAGVIIGARSALFTPAGNVGCIILDEEQDMSYKQDESPRYHARVVAE 418 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV--- 399 A +++GSATP+LET + LLR+ R G +D++ + Sbjct: 419 ILARRHGAILVMGSATPSLETYARALSGELTLLRMPERIGAQSLPRVRAVDMRAELRLGR 478 Query: 400 QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 + L+ L + + L Q I+ LNRRG++ +LC CG++ C C H A Sbjct: 479 RTILSNDLRDLLTETLARGEQAIIMLNRRGYSTFVLCRACGFVLSCHACGQPMVYH-ADG 537 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L CHHCD + VP CP CGS + G GTE+LE L L P + R+DRDTT RK Sbjct: 538 TLVCHHCDLRADVPVVCPKCGSRCIKYFGAGTEKLEAELEQLLPQARVIRMDRDTTGRKH 597 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 A E+ LA R IL+GTQM+AKGH P V V ++ D +L DFR+AER L T Sbjct: 598 AHEEILARFRRRDYDILLGTQMVAKGHDLPGVQTVGIISADASLNLPDFRAAERCFMLIT 657 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 Q AGRAGR G +GEV++QT++PEH +Q+ L + Y+AF Q + RR + PP + V + Sbjct: 658 QTAGRAGRHGARGEVIVQTYNPEHYAVQSALRQDYEAFYAQEIVLRRELFYPPLSRLVKL 717 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 + Q A ++ + + V+GP PAL K G +R+ +L++ Sbjct: 718 LFHHMDRQRAWDAAAAFVDVFQKAFHGRQGYMVIGPSPALIAKERGEYRFVVLIKTLVLT 777 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +Q + + +D+DPI Sbjct: 778 DIQKFLRAQGLHLRND-------IAIDIDPI 801 >UniRef50_B3DWK1 Primosomal protein N', superfamily II helicase n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DWK1_METI4 Length = 635 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 205/626 (32%), Positives = 317/626 (50%), Gaps = 26/626 (4%) Query: 127 VDLNSLKRSPKQQQALAALRQGKIWR--DQVATLEFNDAALQALRKKGLCDLASETPEFS 184 + N KR+ K+++ALA L++ R + L +KGL + + Sbjct: 12 LFQNKHKRAKKEKEALAYLQKFHPVRLSELPQKTGIPRRTWNKLLEKGLLRAVLTEKKKA 71 Query: 185 DWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVL 242 + L EQ A+ I + LL GVTGSGKTEVYL + L Sbjct: 72 SSPPIFPCYTPPQNLTEEQRKALDFIGQQLEDPKPKPILLFGVTGSGKTEVYLHAMARCL 131 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERF--NAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 Q KQ L +VPEI LTPQ + R RF + + HS ++ E+ W + + I+ Sbjct: 132 TQKKQVLFLVPEIALTPQLLERIHARFASSYTLGCWHSRISRGEKAHLWNQVLANQIDIL 191 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IGTRSA+F PF++LG+I++DEEH+SS+KQ+E RYH RD+AV R E ++LGSATP+ Sbjct: 192 IGTRSAIFAPFRSLGLIIVDEEHESSFKQEESPRYHGRDVAVMRGRLEGSLVLLGSATPS 251 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--------------LAPA 406 LE+ N KY L+ L +R + + ++DL+ QK +A ++ Sbjct: 252 LESYYNALNAKYNLVELKKRVEERKLPLVSIIDLRKQKQRASKTETQKPLSNTEELISRE 311 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L + + L QVIL++N RG++ +L C CG++ CP C + H+ L CH C Sbjct: 312 LKEAIEKRLDKKEQVILYINHRGYSSSLQCSSCGYVLPCPNCSISLSYHKIPGVLNCHLC 371 Query: 467 DSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLA 526 + P CP C + +G GTE++E+++ LFP I R+D DT +KG LEQ L Sbjct: 372 NYSSSFPSFCPVCKAGKFKFLGSGTEKVEESIRKLFPAARILRMDSDTIRKKGDLEQALR 431 Query: 527 EVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG 586 + IL+GTQM+AKG FP V+LV ++ +D L DFR++E+ Q QV+GR+G Sbjct: 432 AFSQHDYDILVGTQMVAKGLDFPHVSLVGIVSIDSLLHLPDFRASEKSFQQLLQVSGRSG 491 Query: 587 RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNN 646 R +GEV +QT P HP +Q + Y FAEQ L R+ + PP+ +++R + Sbjct: 492 RGSIEGEVYIQTRTPYHPAIQFARHHDYLGFAEQELEFRKSLSYPPFYRAIMIRFVGNPE 551 Query: 647 QHAPLFLQQLRNLILSSPLADEKLWVLG-PVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + Q L I ++ ++G P PA K ++ +Q+ ++ + + Sbjct: 552 EKVKYLAQVLTREIKEKI--EDDTTLVGTPSPAPIVKVKSQYHYQLFIRSLKVLEASQKL 609 Query: 706 NGTLALINTIPDSRKVKWVLDVDPIE 731 L ++ + +D+DP + Sbjct: 610 REIL---LDRKETLGITLRIDIDPQD 632 >UniRef50_A8PKH0 Primosomal protein N' n=1 Tax=Rickettsiella grylli RepID=A8PKH0_9COXI Length = 684 Score = 665 bits (1716), Expect = 0.0, Method: Composition-based stats. Identities = 300/729 (41%), Positives = 416/729 (57%), Gaps = 60/729 (8%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + +A+P PL + F+YL P P +LK Sbjct: 14 ILKIAIPAPLHQYFEYLAPSH-------------------------------FPRMKLKK 42 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 + VL P L+ ++ P + Sbjct: 43 GLRVL--VPFGKRKKIGFLMETSE----------SSVWPKNKLKQVITIL---------- 80 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 D L S +Q + + A N + + KK L Sbjct: 81 ----DDFPLLPDSLQQLIEWTSRYYHCPIGEVFANALPNALRSEKMSKKLKKFLKENKTH 136 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVL 242 + + S + L LN Q AV I + F +LL GVTGSGKTEVYL V+E VL Sbjct: 137 KDTDTSISSKSRKALPLNNHQQQAVATIIHSLGQFKTFLLNGVTGSGKTEVYLEVIEAVL 196 Query: 243 AQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIG 302 +G+QALV+VPEIGLTPQ +ARF+ F+ P+ + HS L D++RL WL +K G+A+IVIG Sbjct: 197 NRGEQALVLVPEIGLTPQMLARFQTCFSVPLILFHSKLTDTQRLENWLLSKVGKASIVIG 256 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSALFTP GVI++DEEHDSS+KQQ+G RYHARDLA+ R E IP+ILGSAT +LE Sbjct: 257 TRSALFTPLLRPGVIIVDEEHDSSFKQQKGLRYHARDLALVRGRLENIPVILGSATASLE 316 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVI 422 ++ N QK+Y+++ L +RAG AR +DL+ +K+ G + +L+ M++HLQ +QV+ Sbjct: 317 SIFNAHQKRYQIIHLPQRAGMARQPSFRFIDLRHEKMDHGFSSSLLQTMKKHLQKQSQVL 376 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST 482 LFLNRRGF+P + C DCGW A+C RC+ + H+ HL CH+C +RP+ R C C Sbjct: 377 LFLNRRGFSPVIRCQDCGWTADCQRCEQKMSFHKNPAHLLCHYCGYRRPLDRYCLGCQGQ 436 Query: 483 HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 L+P+G GT++LEQTL FP + I R+DRD T RKG+ + L +H +ILIGTQML Sbjct: 437 QLLPLGQGTQRLEQTLQKYFPHIGIVRVDRDNTQRKGSFNELLKTIHDNKGQILIGTQML 496 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 AKGHHFP+VTLV +L+ D LFSADFR+ ER QL TQVAGR+GRA K GEV++QTHHPE Sbjct: 497 AKGHHFPNVTLVGILEADSGLFSADFRALERTGQLLTQVAGRSGRADKCGEVLIQTHHPE 556 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 HPL L+ +GY +F+E L ER+ LPP++ ++ AE N + FL +++ + Sbjct: 557 HPLFNHLIEQGYFSFSEILLQERQRSLLPPYSYLALIHAEAFNAAYPFNFLNEVK---IQ 613 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 + +++ VLGPVP+L P+ G +R Q+LLQ SR LQ ++ + ++ + SR+V+ Sbjct: 614 AECIKKEVNVLGPVPSLRPRCAGYFRSQLLLQAKSRYVLQRVLAQIIKPVSLLNSSRRVR 673 Query: 723 WVLDVDPIE 731 W LDVDPIE Sbjct: 674 WSLDVDPIE 682 >UniRef50_UPI0001C17122 Primosomal protein n n=2 Tax=Nostocaceae RepID=UPI0001C17122 Length = 884 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 220/636 (34%), Positives = 321/636 (50%), Gaps = 22/636 (3%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQA 167 + + P T +L+ KR + LA V + L+ Sbjct: 257 KLTQSKPQTQLAVTLVDHGRELSLTKRQREILNLLADHGGELWLTACVEICKTTPPTLRL 316 Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTG 227 L K G + + + + L +Q+ A+ AI +A F+ LL GVTG Sbjct: 317 LEKLGCVVIEEQERLRREQGPKMGKDQAK-TLTPDQSQALEAIIAAKG-FNKILLHGVTG 374 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTEVYL + +L +GK ALV+VPEIGLTPQ RFR RF V+V HS L+ ER Sbjct: 375 SGKTEVYLQAIAPLLGEGKSALVLVPEIGLTPQLTDRFRARFGNKVQVYHSNLSRGERYD 434 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAH 346 W + G + +VIGTRSA+F+P NLG+I++DEEHDSS+KQ YHAR +A +RA Sbjct: 435 TWRQMFTGSSQVVIGTRSAVFSPLPNLGIIILDEEHDSSFKQDSRIPTYHARTVAQWRAE 494 Query: 347 SEQIPIILGSATPALETLCNVQQK----KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 E P+ILGSATP+LET +V + L L +R + ++D++ + Q Sbjct: 495 LENCPLILGSATPSLETWVDVTLPPSPTHNQYLSLPQRINSKPLPPIEIVDMRQELKQGN 554 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH---- 455 + L +++ Q ILF++RRG + + C CG++ ECP CD H Sbjct: 555 RSMFSRTLEQALQELKGKGQQGILFIHRRGHSTFVSCRSCGYVLECPNCDVSLAYHHLEA 614 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 L+CH+C+ R P+ CP CGS +L G GT+++ Q + FP + + R D DTT Sbjct: 615 GGPELLKCHYCNYGRSHPKLCPECGSPYLKFFGSGTQKIVQEINRQFPDLQVIRFDSDTT 674 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 KG+ + L + +G A +L+GTQML KG P VTLV ++ DG L +D+R++ER Sbjct: 675 RNKGSHRKLLDQFAKGEADLLVGTQMLTKGLDLPQVTLVGVVAADGLLHLSDYRASERAF 734 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 Q TQVAGRAGR + G V++QT+ PEH ++ + Y +F LA+R + PP Sbjct: 735 QTLTQVAGRAGRGEESGRVIIQTYTPEHAVIAAVQNHDYQSFCRAELAQRDALSYPPCGR 794 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 +++R + Q + P L +LGP PA + R+RWQILL+ Sbjct: 795 LILLRLTSLDPIQVQNTAQIIATTFPHQP----GLEILGPAPASILRVANRYRWQILLKF 850 Query: 696 PSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + + P V +DVDP+ Sbjct: 851 A--PNILPQMPDWGQIFQLCPP--GVSLTIDVDPLN 882 Score = 68.8 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 73/204 (35%), Gaps = 17/204 (8%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEVLDSEP 71 Y +PE + + G + VP+G QQ I + + S +PL +++ V +++ E Sbjct: 94 NLLIYQIPETLNINPGDILTVPWGTQQ-LGAIAIRLLSQLPSGIPLEKVREVKDIVSKE- 151 Query: 72 VFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ------ 125 F + W LL A YY+ P+ V+ ALP + + + + Sbjct: 152 FFPRTYWELLGRIATYYYTPLIKVIRVALPPGILERSQSRLRLKRENIPPGGEEFLGSQA 211 Query: 126 -AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFS 184 L L+ P + L++ D+ + +++ K +++ + Sbjct: 212 AREILKVLQSQPDGDYSFQYLKRQVRGFDRGKKQLLDRNWVESYFKL------TQSKPQT 265 Query: 185 DWRTNYAVSGERLRLNTEQATAVG 208 G L L Q + Sbjct: 266 QLAVTLVDHGRELSLTKRQREILN 289 >UniRef50_B6JD02 Primosomal protein N' n=94 Tax=Alphaproteobacteria RepID=B6JD02_OLICO Length = 805 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 236/733 (32%), Positives = 351/733 (47%), Gaps = 19/733 (2%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP-LNEL 60 V V +PV L +T+ Y +PEG+ + G V VP + E +V + + + N L Sbjct: 85 RVVDVLVPVALDQTYSYSVPEGLDLTVGDVVTVPLAAR-EVTAVVWAENPNPDPRLHNRL 143 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + LD P + R + W + Y G V L + G + A Sbjct: 144 KDISGKLD-VPPLREELRRFVDWVSTYTLASRGMVARMTLRMGEHLGPERVRLGVRLVGA 202 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + + + L + + + + + ++ L +G + Sbjct: 203 PP-------ARMTAARARVLDLLSDGLLRPKSEAAKEAGVSVSVIEGLVDEGTLTVEPMP 255 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 E + A + A A + D F+ LL GVTGSGKTEVY + Sbjct: 256 REKPMQPPDPAFAEPDFSPEQSAAAAEMHALAQKDDFAVALLDGVTGSGKTEVYFEAVAE 315 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 ++ +G+QAL+++PEI LT Q + RF +RF HS L R WL NGEA IV Sbjct: 316 IIRKGRQALILMPEIALTGQFLDRFSQRFGVRPIEWHSELTPRTRARNWLAVANGEAQIV 375 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +G RSALF P+ +LG+IV+DEEHD +YKQ +G YHARD+AV R H +IP++L SATP+ Sbjct: 376 VGARSALFLPYADLGLIVVDEEHDQAYKQSDGAHYHARDMAVVRGHIAKIPVVLSSATPS 435 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQAD 418 +ET N + +Y + L R G +DL+ + G ++P L ++ ++ Sbjct: 436 VETEVNARTGRYTRIALPSRFGGQHMPQIEAIDLRREGPPRGRFISPPLAEAVKFAVERR 495 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q +LFLNRRG+AP LC CG C CD + H+ + L CHHC P P QCP Sbjct: 496 EQALLFLNRRGYAPLTLCRACGHRFSCNICDAWLVDHRFRQRLVCHHCGFSMPRPHQCPQ 555 Query: 479 CGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 CG+ L +G G E+L++ +A LFP + D + + +L E+ G I+I Sbjct: 556 CGAEESLAAIGPGVERLQEEVANLFPEARTMVLSSDLITDIETMRSELNEIAEGRVDIII 615 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ++AKGH+FP + LV ++D D L + D R+AER QL QV GRAGR +G LQ Sbjct: 616 GTQLVAKGHNFPRLNLVGVVDADLGLGNGDPRAAERTFQLLNQVIGRAGREQGRGVGYLQ 675 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 TH PEHP+++ L+ AF + + R PP+ + N A F ++L Sbjct: 676 THQPEHPVMKALVASDRKAFYDSEIEARERAAYPPFGRLAALIIAAANRPDAEGFARKLV 735 Query: 658 NLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPD 717 L +E++ VLGP A GR R++IL++ L + LA Sbjct: 736 GLAPR----EERVIVLGPAEAPLAVIKGRHRFRILVKSQRVFDLSGYLRTWLAA--APKT 789 Query: 718 SRKVKWVLDVDPI 730 + +D+DP Sbjct: 790 KGSLTLEVDIDPQ 802 >UniRef50_D0GMK1 Primosomal protein N' n=1 Tax=Leptotrichia goodfellowii F0264 RepID=D0GMK1_9FUSO Length = 734 Score = 664 bits (1713), Expect = 0.0, Method: Composition-based stats. Identities = 212/744 (28%), Positives = 366/744 (49%), Gaps = 27/744 (3%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + + + Y + G V F + + +V+S +EL ++ Sbjct: 1 MYYYQMYVENN-KNIYTYK--SQDKYEIGEWCIVNFANRNKM-ALVLSEISETELTIDTA 56 Query: 61 KAVVEVLDSEPVF--THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K + + D PV + L+ W DYY V+ A P L+ + Sbjct: 57 K-IKFISDKAPVLSVPSVIMELVKWIKDYYLSDYNSVIKAAYPGALKLNYSKKAVYVKDL 115 Query: 119 FATEQGQAVDLNSL-KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 E+ + + +S ++ +++ K Q F++ + ++ + Sbjct: 116 EIKEKKEKLFEKEESGKSESIEKFNEYMKKKKEVTFQTLQKNFSEKIINKAIREKAVTIE 175 Query: 178 SETPEFSDWRTNYAVSGERLR----LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + S + N + E L+ LN EQ AV I + + F +L+ GVTGSGKTE+ Sbjct: 176 KKIITKSKIKENTELKSEILKDSVVLNDEQQKAVNRIENGNNKF--YLIKGVTGSGKTEI 233 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 Y+++++N + + ++ +VPEI LTPQ I R +F+ V VLHS L D E+ + W + Sbjct: 234 YVNLIKNAMKENCGSIFLVPEISLTPQMIERLERQFSGSVAVLHSKLTDVEKRAEWSFIR 293 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE-QIPI 352 GE IVIG RSA+F P +NL I+IDEEH+++YKQ RYH ++ A+ RA E + + Sbjct: 294 RGEKKIVIGARSAIFAPVENLKYIIIDEEHENTYKQDTNPRYHVKNAAIKRALIEENVKV 353 Query: 353 ILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMR 412 I GSATP+ E+ ++ L+ L R NA+ V+DL + L+ + Sbjct: 354 IFGSATPSFESYYQAKKGDLELIELKERFNNAKIPEYKVVDLNETP--NNFSDELLKEIS 411 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 L QV+L LNR+ F+ L C +CG I CP C + ++ + L+C +C + Sbjct: 412 NTLAKKEQVLLVLNRKAFSNLLKCKECGNIPTCPNCSISLSYYKYDNKLKCSYCGYEERF 471 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 ++C SCGS ++ +G GTE++E+ L +F I RID ++ K E + Sbjct: 472 DKKCKSCGSDKMIQIGSGTEKIEEELKEIFYDGKIVRIDSESVKTKKDYENLYNDFKNQK 531 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 I++GTQ++AKG HFP+VTLV +++ D L DFR+AE+ QL Q AGRAGR K+G Sbjct: 532 YNIMLGTQIIAKGFHFPNVTLVGIVNSDIILNFPDFRAAEKTFQLLVQSAGRAGREEKEG 591 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN----NQH 648 +V++QT + E+ +++ + Y+ + E+ + R+++ PP+ +I+ + Sbjct: 592 QVIIQTFNKENEVIKKTVENDYEGYFEKEMEIRKLLNYPPYGRLIIIVLSSDEENGLEEK 651 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR--VRLQHIIN 706 +F ++ + + ++ ++ P A K R+R+QI ++ ++++II Sbjct: 652 VKIFYNKIMSSVKRKIQPEKNEFISEPFKAPIYKINTRYRYQIFIKFNRNNITKIKNIIR 711 Query: 707 GTLALINTIPDSRKVKWVLDVDPI 730 TL N + ++ +DVDP+ Sbjct: 712 ATLNDYNE----KNMRISVDVDPV 731 >UniRef50_Q3MDW5 Replication restart DNA helicase PriA n=11 Tax=Cyanobacteria RepID=Q3MDW5_ANAVT Length = 849 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 217/629 (34%), Positives = 319/629 (50%), Gaps = 41/629 (6%) Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVS 193 R + + L + + + + L+++ +KG + ++ + Sbjct: 229 RQREILEVLRRRGGELWHSELLQICSTSSSTLKSMEQKGYIAIEEREVLRTEQGQVLDLD 288 Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 +L LN Q A+ I + F+ LL GVTGSGKTEVYL + +LAQGK ALV+VP Sbjct: 289 TPKL-LNIAQENALVTI-HRLNGFAQVLLHGVTGSGKTEVYLQAIAPILAQGKSALVLVP 346 Query: 254 EIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 EIGLTPQ RFR RF + V HS L+D ER W + G IVIGTRSA+F P Sbjct: 347 EIGLTPQLTDRFRARFGNNKISVYHSALSDGERYDTWRQMLTGTPQIVIGTRSAIFAPLP 406 Query: 313 NLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK- 370 NLG+I++DEEHDSS+KQ YHAR +A +RA E P++LGSATP+LE+ +V Q Sbjct: 407 NLGLIILDEEHDSSFKQDSPIPTYHARTVAQWRAELENCPLVLGSATPSLESWVSVSQNS 466 Query: 371 ---------------------KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPA 406 + L R + ++D++ + + + Sbjct: 467 KFKIQNSKLTISSSPSSPPSPQSLYSPLPERINSRPLPPVEIVDMRQELQDGNRSIFSRS 526 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ----HHLR 462 L ++ Q Q ILF++RRG + + C CG++ ECP CD HQ + LR Sbjct: 527 LQAALQHLEQTGRQGILFIHRRGHSTFVSCRSCGYVVECPHCDVSLAYHQTEVGAPQLLR 586 Query: 463 CHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALE 522 CH+C+ P+ CP C S +L G GT+++ Q L+ FPG+ R D DTT KGA Sbjct: 587 CHYCNYVSVHPKHCPECSSPYLKFFGSGTQRVAQELSRQFPGLKYIRFDSDTTRNKGAHR 646 Query: 523 QQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVA 582 L + G A +L+GTQML KG P VTLV ++ DG L +D+R++ER Q TQVA Sbjct: 647 TLLTQFANGEANLLVGTQMLTKGLDLPQVTLVGVVAADGLLNLSDYRASERAFQTLTQVA 706 Query: 583 GRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAE 642 GRAGR G V++QT+ PEHP+++ + + Y +F + L +R+ + PP+ +++R Sbjct: 707 GRAGRGDDPGRVIMQTYTPEHPVIEAVRHHDYQSFVQAELEQRQALNYPPYGRLILLRLS 766 Query: 643 DHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQ 702 + + ++ A+ +LGP PA + R+RWQILL+ Q Sbjct: 767 SFDPIQVQNTAGAIATVL----NANPGFELLGPAPASVMRVANRYRWQILLKFAPEALPQ 822 Query: 703 HIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + PD V +DVDP+ Sbjct: 823 --LPDWDEVRLLCPD--GVSLTIDVDPLN 847 >UniRef50_D2QJK3 Primosomal protein N' n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QJK3_9SPHI Length = 804 Score = 663 bits (1710), Expect = 0.0, Method: Composition-based stats. Identities = 217/658 (32%), Positives = 339/658 (51%), Gaps = 32/658 (4%) Query: 94 DVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD 153 +V P ++R+ R N + V L L++ PKQQ+ + + Sbjct: 154 EVREKYTPKMVRKIRLHRNYEKR------EQLLVLLQRLEKLPKQQEVVMRYLSHVPLQR 207 Query: 154 -------------QVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLN 200 E + ++L L K + + + ++L Sbjct: 208 TPALNEKGLDKTILNQDDELSQSSLATLLKNQVFETFDVIQPRFSDNGSPDGLQTEIKLT 267 Query: 201 TEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 Q TA I + D + LL G+TGSGKTEVY+ +++ L G Q L ++PEI LT Q Sbjct: 268 DAQRTASNQIMAQFDQHNVVLLHGITGSGKTEVYIDLIQQALGSGSQVLYLLPEIALTTQ 327 Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 + R + F + + HS +D+ER+ W +G+ V+G RSA+F PF NLG+I++D Sbjct: 328 IVVRLQRVFGDKMGIYHSKFSDNERVEVWKGVVSGQYQFVVGVRSAVFLPFDNLGLIIVD 387 Query: 321 EEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTR 379 EEH++SYKQ + RYHARD+A+ AH +Q ++LGSATP+LET +Q +Y L+ L + Sbjct: 388 EEHETSYKQHDPAPRYHARDVAIMLAHWQQAKVLLGSATPSLETYYQAKQGRYGLVELFQ 447 Query: 380 RAGNARPAIQHVLDLKGQKV----QAGLAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 R G+A +++++ +K + + L+ + +++ Q ILF NRRG++P + Sbjct: 448 RFGDATLPNIMLVNMQQEKKQKTLRNEFSSVLLGALEANMERKEQSILFQNRRGYSPYMQ 507 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C DC W AECP C T HQ LRCH+C + VPR CP+CGST + +G GTE+LE Sbjct: 508 CEDCDWTAECPNCAVSLTYHQRDAELRCHYCGHKEGVPRMCPTCGSTKVKTIGFGTEKLE 567 Query: 496 QTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 L FP + R+D DTT K A +Q + E G IL+GTQM+ KG F +V+LV Sbjct: 568 DQLQIFFPQSRVLRMDLDTTRAKNAYQQIIQEFEGGQVDILVGTQMITKGLDFDNVSLVG 627 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAG-RAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 + D D + DFR+ ER Q+ TQV+GRAG RAG+QG V++QT +P+ P+LQ ++ Y Sbjct: 628 IFDADRLIHFPDFRATERAFQMITQVSGRAGRRAGRQGTVLIQTSNPQQPILQKVIDNDY 687 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLG 674 + L ER+ PP++ + + + + ++L ++ + + VLG Sbjct: 688 KGLFTEELQERQDFNYPPFSRLIKLTVRHTDRAISHQAAERLAAELVDALGSS---RVLG 744 Query: 675 PVPALAPKRGGRWRWQILLQHPS----RVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 P L + ++ + IL++ ++ I + I T R+V V DVD Sbjct: 745 PEEPLVERIRNQFLFDILIKIERDKVNIKAVKTYIQDRINDILTDKGLRQVSIVADVD 802 Score = 85.3 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 71/200 (35%), Gaps = 4/200 (2%) Query: 26 VKAGCRVRVPFGK--QQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLW 83 +K G RV VPFGK + IV + + + + + E LD P+ T L W Sbjct: 5 LKIGARVIVPFGKKNGRVFTAIVAKLHNTPPT-GYQARYINETLDEYPLTTSYQLELFRW 63 Query: 84 AADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALA 143 ADYY IG+V+ ALP L+ + + + + +L K+ AL+ Sbjct: 64 IADYYMCCIGEVMNVALPSGLKISSQSKVQFNPDF-SYPELLTELEETLLTELKKHPALS 122 Query: 144 ALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQ 203 G++ D V + ++ ++ + + + E+ Sbjct: 123 YDEVGRLAGDGVNVAALIKSLVEKKAIIVFEEVREKYTPKMVRKIRLHRNYEKREQLLVL 182 Query: 204 ATAVGAIHSAADTFSAWLLA 223 + + + +L Sbjct: 183 LQRLEKLPKQQEVVMRYLSH 202 >UniRef50_C8R1V8 Primosomal protein N' n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8R1V8_9DELT Length = 856 Score = 661 bits (1707), Expect = 0.0, Method: Composition-based stats. Identities = 218/591 (36%), Positives = 310/591 (52%), Gaps = 8/591 (1%) Query: 147 QGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATA 206 G R+ + AL+ L + + + RL EQ+ Sbjct: 266 NGVPRRELLKRYPGAGRALKGLLARNQISTFEQRRYRDPFGEAPPFFPRPERLTDEQSAV 325 Query: 207 VGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIAR 264 + + A + ++ +LL G+TGSGKTE+YL E LA G+Q LV+VPEI L Q Sbjct: 326 MARLTPAIEGRQYTPFLLHGITGSGKTEIYLRAAEAALAAGRQVLVLVPEIALATQLEGH 385 Query: 265 FRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHD 324 F RF V +LHSGL+ +R W +GEA I IG RSA+F P + G+I++DEEHD Sbjct: 386 FCSRFGNAVALLHSGLSGGQRYDQWSLLLSGEAQIAIGARSAIFAPLADPGLIIVDEEHD 445 Query: 325 SSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNA 384 +YKQ++G RY+ARDLA+ R +Q ++LGSATPA+ + +Q K+ LL++TRR + Sbjct: 446 PAYKQEDGLRYNARDLALLRGVKQQATVLLGSATPAVSSYHAARQGKFELLQMTRRVEDR 505 Query: 385 RPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 ++DLK + +G +P LI +R++L A Q ++FLNRRGFA +LC DCG Sbjct: 506 PLPAVEIVDLKAVRTVSGLPPLFSPQLIRALRENLAAGQQSLVFLNRRGFANLVLCKDCG 565 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 +C C T H+ L CHHC ++P C C S LVP G GTE+LE+ L Sbjct: 566 RPVQCRHCQVTLTYHKKADLLLCHHCGYRQPRASLCGHCHSGTLVPAGFGTERLEEELRR 625 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 FP ++R+D+DT+ + + L V ILIGTQM+ KGHHFP VTLV ++ D Sbjct: 626 HFPAARLARLDQDTSRDRKEFLKVLKAVRDHEVDILIGTQMITKGHHFPRVTLVGIVWAD 685 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 L D+++AER QL TQV GRAGR + G V++QT EH + Y EQ Sbjct: 686 AGLGIPDYKAAERTFQLLTQVTGRAGRGEQPGRVLVQTLQSEHYSIALARAHDYQGLYEQ 745 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALA 680 +A R+ + PPW + +R + + +L + AD + VLGP PA Sbjct: 746 EIALRQRLGFPPWGRLINLRFDGEKEEKVRELALRLGEIAR--GRADSGIKVLGPAPAPL 803 Query: 681 PKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + R+RWQ+LL+ L + L + + VK LDVDP Sbjct: 804 SRLKDRFRWQLLLKGRGVAPLHRLCQALLGEYARLAGASTVKLSLDVDPEN 854 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 76/190 (40%), Gaps = 19/190 (10%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASEL------ 55 VA+ P+ +T Y P G+ + G R+ VP G++Q G ++ + Sbjct: 8 YFEVAVAAPIHQTLTYAPPAGVAQLPPGHRLLVPLGRRQV-TGYLLDCAAQPPALKDGGN 66 Query: 56 ---PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 P +++A +EVLD EP+F ++ W ADYYHHPIG+V+ +ALP L + Sbjct: 67 DRQPGGKIRAALEVLDDEPLFPAAMVPFFRWIADYYHHPIGEVIQNALPAGLSRRSTRII 126 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 A S + SP + +A E + + ++ Sbjct: 127 KLTDRGAEKLPSLAQSTASKRNSPL--------PLSDWLPELLARGELSATKSATVIRRR 178 Query: 173 LCDLASETPE 182 +L E Sbjct: 179 PPELKRWQDE 188 >UniRef50_A8SLK6 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SLK6_9FIRM Length = 798 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 212/799 (26%), Positives = 364/799 (45%), Gaps = 75/799 (9%) Query: 3 VAHVALPVPL----PRTFDYLLPE--GMTVKAGCRVRVPFGKQ-QERIGIVVSVSDASEL 55 +A V + L F Y +P+ + G RV VPFGK + +G+V+++ D ++ Sbjct: 2 LAEVVVKSFLLSRAENIFTYKIPKNIEEEISVGKRVIVPFGKGNKGTVGLVINILDEKDV 61 Query: 56 PLN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG------- 107 + + K + V+D + + +L + ++ Y + L LP Sbjct: 62 ETDIKFKEINMVIDEREIVSKIQIKLAKFMSEKYITNLSYCLNCVLPPGDWSKIEEFFVL 121 Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQA 167 + + A + ++ ++ + L + +I + + L+ Sbjct: 122 NKEKSNELSVVEAEFFSKRKNILEIREFYNDNSKVNYLIENEIIVKKYKYNNSENKFLEK 181 Query: 168 LRKKGL---------------------------CDLASETPEFSDWRTNYAVSGERLRLN 200 K F+ + +S E L L Sbjct: 182 FVKLNEDFDFSKIRKNAVKQLELLNFLKGKDFVSVKILRENNFTKAVVDSLISMEALVLT 241 Query: 201 T---------------------EQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 EQ + I ++ + +L+ G+TGSGKTE+YL ++E Sbjct: 242 ENKIYKNSIEEKSSYKKLKLNKEQKDVLDNILNSENNK--FLIHGITGSGKTEIYLQLVE 299 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 N+L QGK ++++VPEI LTPQTI RF RF + ++HS L E+L+ W + ++ + I Sbjct: 300 NMLEQGKSSIILVPEISLTPQTIERFSGRFGNDIAIIHSRLTIIEKLNQWKQIQDKDIKI 359 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 V+G RSA+F+P KNLG+++IDEEH+SSY + +Y+ ++A Y ++LGSATP Sbjct: 360 VVGARSAIFSPIKNLGLVIIDEEHESSYISDQNPKYYTHEVAEYLVGLSGAKLVLGSATP 419 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQ 416 ++ +LL L RA ++D++ + + L+ +L +++ L Sbjct: 420 SVNIYERTNSDDIKLLELKNRATKNSLPEVEIVDMREELLLGNKSILSNSLYEEIQKTLD 479 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH--LRCHHCDSQRPVPR 474 QVILFLN+RG + + C CG++ +C CD T H+ CH C +P P+ Sbjct: 480 RKEQVILFLNKRGRSSFVFCRSCGYVQKCDYCDISMTYHKDNRKDICICHMCGRTKPKPK 539 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP+C + G GTE LE+ + F +SRID DT+ KG E+ ++ Sbjct: 540 ICPNCFKQSIKEFGFGTEALEEYIKNAFKDAKVSRIDADTSKEKGVYEEVYRKMKNKEID 599 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 ILIGTQM++KG FP+VTLV ++ D +L FRSAE+ QL TQVAGR+GR K+G+V Sbjct: 600 ILIGTQMISKGLDFPNVTLVGVVLADISLNIPSFRSAEKTFQLLTQVAGRSGRGDKEGKV 659 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++QT+ P H + Y+ F ++ + RR PP V + + ++ L+ Sbjct: 660 IIQTYKPSHYSIVNSSDHNYEEFFKEEINFRRSFLYPPKAHIVNFQFRSKSVENCMEELK 719 Query: 655 QLRNLILSSPLAD---EKLWVLGPVPALAPKRGGRWRWQILLQH-PSRVRLQHIINGTL- 709 ++R+LI + + + +LGP P +R+ + ++ + + + Sbjct: 720 KIRDLIFDKFKKEINLKNIIILGPNPDAIKWVNMVYRYNLTIKVLEDYDVFRQFLTELIF 779 Query: 710 ALINTIPDSRKVKWVLDVD 728 + + K +L +D Sbjct: 780 NKKYSFNTEKNGKLILTID 798 >UniRef50_B3QT54 Primosomal protein N' n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QT54_CHLT3 Length = 829 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 232/725 (32%), Positives = 341/725 (47%), Gaps = 30/725 (4%) Query: 19 LLPEGMTVKAGCRV-RVPFGKQQERIGIVVSVSDASE--LPLNELKAVVEVLDSEPVFTH 75 LP + VK +V PF + E + + K ++ L+ + T Sbjct: 115 ALPAELRVKPVEKVFLKPF-----------ELRSEPETIVKTDLRKRILSYLEKQSPLTV 163 Query: 76 SVWR-----LLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLN 130 + L A G + R+G+P + + L Sbjct: 164 KQLQNRTQSKSLRLALTQLEAAGYI--ELKKSYARKGKPKLKTAYTLCKNFSEDEISSLK 221 Query: 131 S-LKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTN 189 L+R+ KQ + + + R L + L AL ++G+ + +R+ Sbjct: 222 EDLQRAKKQAEVFERILAFEQKRFFKEELSASGQILDALCQRGILAKEKVDVS-AQYRSV 280 Query: 190 YAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 + + + L Q I +A F +LL GVTGSGKT +Y+ + L GK Sbjct: 281 FRETSAKKPLTAAQEPVYEKIRAALQAAAFRTFLLHGVTGSGKTRIYIEAIRETLGAGKS 340 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 ALV+VPEI LTPQ ARF+ F + VLHS +N SE+ AW K G+A + +G RSA+ Sbjct: 341 ALVLVPEISLTPQIAARFQAFFGDNLRVLHSAMNGSEKFEAWESLKTGKARVALGPRSAV 400 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 F P +NLG++++DEEH+SSYKQ + RYHARD A+ RA E +LGSATP+ E+ N Sbjct: 401 FAPLENLGLVIVDEEHESSYKQFDKPPRYHARDTAIMRAKLEGAVCVLGSATPSFESYYN 460 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPALITRMRQHLQADNQVILFL 425 KY LL L+ RA A ++ K K L+ L + + + Q ILFL Sbjct: 461 ALSGKYELLTLSERADGAVAPEIKLVHFPKSAKKSQNLSQPLFEEIEKRHASGEQSILFL 520 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRGFA ++ C CG+IA C C H + HLRCH+C CP CG+ L Sbjct: 521 NRRGFAGSVRCEKCGFIAMCSDCHVPLVYHFQKAHLRCHYCGKVADTLHTCPKCGAKDLT 580 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 GTE++E L LFP ISR+D DTT+ K + L + G +IL+GTQM+AKG Sbjct: 581 LKSSGTERIEIELGQLFPPDDISRMDLDTTAGKDKHAEILKDFQTGKTKILLGTQMVAKG 640 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 FP+VTLV +++ D L DFR++ER L QVAGRAGR KQGEV +Q + E + Sbjct: 641 LDFPNVTLVGVINADIGLTLPDFRASERLFALLLQVAGRAGRGKKQGEVFMQVFNLESEV 700 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 + + Y+ F + R+ + PP++ + +++ Sbjct: 701 FRFVAKGDYEIFYNYEIESRKELFYPPFSRLAKIEFSGEEENEVASAAADFAKILIRDLD 760 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII--NGTLALINTIPDSRKVKW 723 + +LGP PA+ K GR+R QIL++ + + N + KV+ Sbjct: 761 PES-FDILGPAPAVMAKLKGRYRHQILIKQKGTTLISKKLFRKMQFEFRNESKFAAKVRL 819 Query: 724 VLDVD 728 +DVD Sbjct: 820 DIDVD 824 >UniRef50_C0QHU0 PriA n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QHU0_DESAH Length = 815 Score = 661 bits (1706), Expect = 0.0, Method: Composition-based stats. Identities = 222/635 (34%), Positives = 336/635 (52%), Gaps = 11/635 (1%) Query: 104 LRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDA 163 + + F GQ + + +Q + + + Sbjct: 179 AARLKKDQIQMKTEKFILPTGQGEPMERMSAKRRQILEIVREKGEISLTLLKQEVPTAPK 238 Query: 164 ALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLL 222 ++ L G ++ + L EQA V + S D FS +LL Sbjct: 239 LVKILAGAGYLEVIERQVFRDPLG-DPVDPDVPPELMDEQAGVVNQVISEMDKGFSRYLL 297 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 +GVTGSGKTEVYL ++ + +G+ ALV+VPEI L QT RFR RF + VLHSGL Sbjct: 298 SGVTGSGKTEVYLRLVTEAMDRGQGALVLVPEISLISQTERRFRARFGKKIAVLHSGLTM 357 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 ERL W + G+A IVIG RS++F P NLG+I++DEEHD+SYKQ+ G RY+ARD+AV Sbjct: 358 GERLDQWNRIMTGDAVIVIGVRSSVFAPINNLGIIIVDEEHDTSYKQETGLRYNARDIAV 417 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG----QK 398 RA E IP++LGSATP++++ NV + +++ L+LT+R ++DLK + Sbjct: 418 VRAKIENIPVVLGSATPSVQSYYNVCEGRFKELKLTKRVNCHPLPEIELVDLKRYKDFRG 477 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 ++ + P L + L+ Q ++FLNRRGFA +C C +C CD TLH Sbjct: 478 IERIITPELSRGIGHCLERGEQALIFLNRRGFATYPVCQACNEPVKCKFCDLTMTLHMDT 537 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 + RCH C + + CP+C + + P+G GTE++E L LFP ++R+D+DT S+K Sbjct: 538 NEFRCHLCGFSMSMNQPCPNCNARRIKPLGFGTERIENMLQVLFPDARVARLDQDTGSKK 597 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 GA+ L +V I+IGTQMLAKGH FP +TLV ++ D +L DFR+ ER QL Sbjct: 598 GAMVSILKKVKHRTVDIIIGTQMLAKGHDFPFITLVGVICADLSLNFPDFRAGERTFQLL 657 Query: 579 TQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVI 638 QVAGRAGR ++G VV+QT++PEH ++ + + F + + R+ + PP + + Sbjct: 658 AQVAGRAGRGDRKGRVVMQTYNPEHFSIEASKNQDFVEFYHKEIPFRKGLGYPPVSRIIQ 717 Query: 639 VRAEDHNNQHAPLFL----QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 ++ + + ++ + L+ + +LGP+ A PK R+RWQILL+ Sbjct: 718 LKISGLDKDKVKVHALFVGEECKRLVDQDRENGHLVQILGPIEAGIPKIAMRYRWQILLK 777 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 P L ++ LA + +R+V +DVDP Sbjct: 778 SPRATLLNRLVRAMLAE-KKVFANREVTVGIDVDP 811 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 48/231 (20%), Positives = 84/231 (36%), Gaps = 18/231 (7%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 +A+ +P+ TF Y LP + + G RV VPFG ++ G V+ E + Sbjct: 6 FIEIAVALPVHGTFTYTLPLDLAAEAIPGMRVLVPFGNRRV-TGYVLGPGH--ENTEFKA 62 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ---------GRPAA 111 K + +LD P+F ++ L W +DYY HP+G+V+ ALP L + +P Sbjct: 63 KPIQGLLDEAPLFPPAMIELFRWVSDYYIHPLGEVIKAALPKGLNRYDVSFLSLVEKPGN 122 Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 + + ++ LK+ R + +Q + Sbjct: 123 LPDLPDLPDLSPREQAVVDLLKKKGSVSVKSLVGRGKNPSVSALVRRLIQKGVIQQAARL 182 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 + +T +F GE + + + + I S LL Sbjct: 183 KKDQIQMKTEKF----ILPTGQGEPMERMSAKRRQILEIVREKGEISLTLL 229 >UniRef50_C8NZ83 Primosomal protein N' n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8NZ83_ERYRH Length = 716 Score = 661 bits (1705), Expect = 0.0, Method: Composition-based stats. Identities = 226/738 (30%), Positives = 349/738 (47%), Gaps = 36/738 (4%) Query: 1 MPVAHVALPVPL--PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 + V + +T Y G V G R + + + + V SV + E Sbjct: 4 LKYLEVYIEESFLNNQTLTYS-DNGFDVSPGVR-VMVRVRNRLMVAFVHSVKEPYET-TY 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 + + VLD P+ + L LW + Y P+ L LP L+ A Sbjct: 61 TVAPIDSVLDEVPILNQELDDLALWMSYEYMTPMIRCLQTILPNKLKPKSSAGTIKTERV 120 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 +PKQ L L Q + A ++D + L +KG + Sbjct: 121 LKLTG----HSMGSDLTPKQCAFLKYLDQNTPLSLKAARHYYSDY--RKLIEKGFVEEFE 174 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 + + L +Q A+ I S +LL GVTGSGKTE+YL+ Sbjct: 175 REVTYQEQFIKADYLKP--TLTPDQIEALNKI--QFGVASTYLLHGVTGSGKTEIYLNAA 230 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 VL + KQ L+MVPEI LTPQ I R ERF V + HS LND E+ +++ + + Sbjct: 231 AQVLKEQKQVLIMVPEISLTPQMIQRVSERFGEDVAIYHSALNDQEKYEQYVRVQKQQVK 290 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 IVIGTRS++F PF++LG+IV+DEEHDSSYKQ + YH RD+A+ R+ P++LGSA+ Sbjct: 291 IVIGTRSSIFMPFEHLGLIVMDEEHDSSYKQDQVPMYHTRDIAIKRSQFHNCPLVLGSAS 350 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG---QKVQAGLAPALITRMRQHL 415 PALE+ + Y+LL L R + ++D + +K L L++ +++ L Sbjct: 351 PALESYARALKGNYQLLELNDRINHTF-PTVTLVDTRTALYEKQSPYLTHTLLSGIKKRL 409 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD---SQRPV 472 A QVIL LNRRG+ L + C CD H+ +RCH C Q P+ Sbjct: 410 SAGEQVILLLNRRGYNTLLKNAITNEVLLCEHCDVALNYHKDDQTIRCHMCGESYHQLPL 469 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P ++ G+GT++L + L +FP I+R+D DTTS+K A ++ L + Sbjct: 470 VDGKP----PKIIGSGVGTQRLVEELEGIFPKARIARMDADTTSKKNAHQRILNDFINHQ 525 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 + IL+GTQM+AKG +VTLV +++ D L +D+RS E + Q AGR+GR G Sbjct: 526 SDILVGTQMIAKGLDVENVTLVGIVNADATLAYSDYRSVELTFNMLLQAAGRSGRGQYPG 585 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 EV++QT +P+H + + + Y F +Q + R++ PP+ + + D + + Sbjct: 586 EVIIQTSNPDHYAIVCAVNQKYKHFFKQEMEYRKIAGYPPYNYLISLVFLDEDALKSWRA 645 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + + L+ D+ +LGP K + R +I+L+ + + +I N L L Sbjct: 646 AEDFQKLL-----NDQDFQILGPTE--LRKLQRKHRTRIILKGKNLESMINICNQALQLY 698 Query: 713 NTIPDSRKVKWVLDVDPI 730 I V+DV+PI Sbjct: 699 RKI---NGTGVVVDVNPI 713 >UniRef50_A5EW34 Primosomal protein N' n=2 Tax=Cardiobacteriaceae RepID=A5EW34_DICNV Length = 710 Score = 660 bits (1703), Expect = 0.0, Method: Composition-based stats. Identities = 280/725 (38%), Positives = 398/725 (54%), Gaps = 20/725 (2%) Query: 7 ALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEV 66 + PL + F Y + +G RVRVPFG + + IGI V+ + +K + +V Sbjct: 2 VVLRPLYQRFIYA--AATPIASGMRVRVPFGAR-DAIGITVATVAQPKT-HFHIKKIRKV 57 Query: 67 LDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQA 126 LD+EPVF ++ R L + A YY P G V ALP L G + TE+G+A Sbjct: 58 LDNEPVFDATLLRFLQYTARYYQVPEGTVFAAALPNALLNGASNKRTLPAIYRLTEKGRA 117 Query: 127 VDLNSLKRSPKQQQALAALRQGKIWRDQVAT-LEFNDAALQALRKKGLCDLASETPEFSD 185 + + K QQ L AL + Q+ + A L L +G ++ Sbjct: 118 ANASGKK----QQAVLHALTIQPLSGAQLRQTFSVSAAWLNDLVNRGWLEMTE------T 167 Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + A + + LN Q + + + TFS +L GVTGSGKTE+Y E +LA G Sbjct: 168 FIAPPAATEKAPTLNAAQNAVLQTLITKT-TFSVTVLDGVTGSGKTEIYWRWAELLLAAG 226 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 KQ V++PEIGL ARFR RF+A V HS ++++ RLS W K G+ +V+GTRS Sbjct: 227 KQICVLLPEIGLAMSIFARFRARFSA-CAVYHSEMSEAARLSVWQAVKAGDIKMVVGTRS 285 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF PF LG I++DE HD SYKQ + +RYHA D+AV RA IPI+LGSATP LE Sbjct: 286 ALFLPFCRLGAIIVDEAHDQSYKQSDQFRYHAADMAVVRAKQHNIPILLGSATPTLEHYQ 345 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 ++LL L RA + +++ K GL+ LI+ +RQHLQ Q++LFL Sbjct: 346 QTLTGTWQLLHLPERALTQHKPSIVIDEIEPSKQIGGLSQPLISAIRQHLQRKQQILLFL 405 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 NRRG+AP + C +C W + C CD T+H L CHHC + +P +CP C ST L Sbjct: 406 NRRGYAPVMRCRECSWESSCTACDTMMTVHTFSRQLICHHCGRSQLLPVRCPKCASTQLY 465 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 GLGT++LEQT+ FP + RIDRD S +Q L ++H G ++IGTQ LAKG Sbjct: 466 VCGLGTQRLEQTVREQFPQARVLRIDRDVFSTAKQFQQALKQIHSGAIDVMIGTQWLAKG 525 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 HHFP + LVA++D D A +S+DFR+ ER AQL QV GRAGR + G + +QT H +HP+ Sbjct: 526 HHFPRLQLVAVVDADSAFYSSDFRAEERLAQLLVQVGGRAGR-EQAGTIWIQTQHAQHPI 584 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 L + Y A A+Q L R+ QLPP+++ + A+ H L +R++ + + Sbjct: 585 FSAL-SQPYFATAQQLLTIRQQAQLPPFSAQTLFWAQHHELSRTLAVLTSMRDVAQKAEI 643 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 LGP+PAL ++ G++R Q+++Q P++ LQ + AL+ + VK + Sbjct: 644 GQT-WQWLGPIPALIARKDGKYRAQMVVQAPNKKVLQRELAQVRALLWEESRASGVKVGI 702 Query: 726 DVDPI 730 DVDP+ Sbjct: 703 DVDPL 707 >UniRef50_C6XFD9 Primosome assembly protein PriA n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XFD9_LIBAP Length = 731 Score = 660 bits (1702), Expect = 0.0, Method: Composition-based stats. Identities = 233/733 (31%), Positives = 368/733 (50%), Gaps = 28/733 (3%) Query: 6 VALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVV-SVSDASELPLNELKAVV 64 + L + + Y +P M V+ G VRVP + + +GIV + + ++ +L+ + Sbjct: 18 ILLLQAVSGPYIYSVPSAMKVELGSIVRVPL-RSRTVLGIVWYNSEEKYKIDSLKLRPIE 76 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 V D P + + + W ADY P+G V + L + E+ Sbjct: 77 YVFD-CPPLSRQMCEFVKWVADYTFSPMGLVARMVVSALSETEKM-----------EEKI 124 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIW--RDQVATLEFNDAALQALRKKGLCDLASETPE 182 Q + + + + L ++ GKIW RD + + + + L+ +G+ E Sbjct: 125 QFTGIFPRINTVARLRVLDKIKDGKIWEKRDLIRASQVSSHVIDGLKAQGVIKQIFEV-- 182 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHS-AADTFSAWLLAGVTGSGKTEVYLSVLENV 241 S + + L+ Q V + F+ L++GVTGSGKTEVYL ++ V Sbjct: 183 ISPVVDSPNLYFSLPILDKNQQDVVEQVVPLCTKGFAVSLISGVTGSGKTEVYLEIVAAV 242 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 L GKQ L+++PEI LT + RF++RF HS L+ S R W + G ++++ Sbjct: 243 LHLGKQVLILLPEISLTSAILERFQKRFGVKPAEWHSSLSTSMREKIWRQVARGAISVIV 302 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSALF PFK LG+IVIDEEHD SYKQ+EG Y+ARD+++ R E P++L SATP++ Sbjct: 303 GVRSALFLPFKKLGLIVIDEEHDISYKQEEGILYNARDMSIVRGKIESFPVVLVSATPSI 362 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQADN 419 E+ N ++Y + L+ R N+ V+D++GQ + G L+P +I +R L + Sbjct: 363 ESRVNGISRRYHSVHLSTRYRNSALPHLQVIDMRGQTIAQGKSLSPEMIDGIRHTLARNE 422 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 Q +LFLNRRG+AP LC CG +C C + H+++ L CH C + C C Sbjct: 423 QTLLFLNRRGYAPLTLCQVCGNRLKCLHCSCWLVEHRSKKKLYCHQCGHSAIYSQSCVVC 482 Query: 480 GST-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 GS+ ++ G G E++ + + FP IS + D G L+ QL+ + +G I+IG Sbjct: 483 GSSGKMIACGFGIERIAEEVCEYFPLARISILSSDLEGGGGRLQLQLSAIAKGEIDIIIG 542 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQ++AKGH+FP ++LV ++D D L +AD RS+ER QL +QV GRAGR G + ++Q Sbjct: 543 TQLVAKGHNFPRMSLVGVVDGDLGLTNADLRSSERTFQLLSQVTGRAGRFGLKSLGLIQA 602 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 + P HP++Q L+ D+F E + R + LPP+ V Q + L+ Sbjct: 603 YQPTHPVMQALVSGDADSFYESEIRARESVNLPPFGRLAAVIISGTKYQEVENYAYNLKE 662 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 S + V GP + GR+R+++L+ LQ + NTI S Sbjct: 663 HAPRS----SDIVVFGPAESPLFMVRGRYRFRLLIHGKRNSNLQGFFSQMYD--NTIKRS 716 Query: 719 RKVKWVLDVDPIE 731 ++ D+DP Sbjct: 717 NALRVQFDIDPQN 729 >UniRef50_A7VUU0 Putative uncharacterized protein n=3 Tax=Clostridiales RepID=A7VUU0_9CLOT Length = 824 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 203/608 (33%), Positives = 317/608 (52%), Gaps = 11/608 (1%) Query: 133 KRSPKQQQALAALRQ--GKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDW-RTN 189 K SPKQ++ + L+ ++ + AL KKGL + + Sbjct: 213 KLSPKQREVFSLLQTVGAASVKEVCYFTGVTAGVVDALVKKGLACCFESERYRNPYDGAP 272 Query: 190 YAVSGERLRLNTEQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 + E + L EQ A + + LL GVTGSGKT V+L +++ + + Sbjct: 273 ESAVKEEIVLTQEQQRAYEEQLAQYQSPDGGISLLYGVTGSGKTSVFLKLIDRAVEDKRG 332 Query: 248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSAL 307 ++MVPEI LTPQ +A F+ R+ V V HSGL+ ERL W + KNG+A I +GTRSA+ Sbjct: 333 VILMVPEISLTPQMLALFQRRYGRQVAVFHSGLSMGERLDEWKRVKNGDALIALGTRSAV 392 Query: 308 FTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNV 367 F PF+NLG+I++DEE + +YK ++ R+HAR++A +R + + L SATP++E+ Sbjct: 393 FAPFENLGLIIMDEEQEYTYKSEQAPRFHAREIAKFRCRWHRCLLTLASATPSVESYYLA 452 Query: 368 QQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILF 424 Q+ Y L ++ R G A+ V D+ + ++ + L+ + ++L+ Q IL Sbjct: 453 QKGVYSLSTISNRYGGAKLPRVVVADMNQELLEGNTGPFSSVLMECLAENLRLRRQSILL 512 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRG+ + C CG CP C T H A L CH+C P +CPSC + Sbjct: 513 LNRRGYHTFVNCRACGEPVTCPHCSISLTYHAANRRLMCHYCGYSIPFTDECPSCHQRQV 572 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 G GT++ E+ + LFP I R+D DTT K + E++L + G I++GTQM+AK Sbjct: 573 RYAGAGTQKAEEAVEELFPEARILRMDADTTMAKYSHEKKLKQFADGEYDIMVGTQMVAK 632 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G FP+VTLV +L D AL+S DFRS ER L TQV GR+GR K+G V+QT+ PE+P Sbjct: 633 GLDFPNVTLVGVLSADQALYSDDFRSYERAFALLTQVVGRSGRGEKEGLAVIQTYTPENP 692 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN---LIL 661 ++Q + Y AF + + R+ M PP+ +V ++ + + Sbjct: 693 VIQMAARQDYGAFFQGEIQMRKAMLYPPFADLCVVGFSGQQEENVEQAARYFTRELIALA 752 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 + A + V+GP A PK GR+R+++++++ + +I L + K Sbjct: 753 QAEYASLPMRVIGPAKAAVPKVSGRYRYKLIIKNRFDKSFRELIARLLRQYGKQKEYAKT 812 Query: 722 KWVLDVDP 729 +D++P Sbjct: 813 SVFVDINP 820 Score = 96.1 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 67/209 (32%), Gaps = 17/209 (8%) Query: 2 PVAHVAL---PVPLPRTFDYLLPEGM--TVKAGCRVRVPFGK-QQERIGI---VVSVSDA 52 V VA+ + +DYL+P+ + + GCRV VPFG + R G+ V + Sbjct: 5 RVGKVAVENTAYHFDKAYDYLIPQTLWAKAEKGCRVLVPFGGGNRTRQGLLMDVEEIRAG 64 Query: 53 SELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 LK+V VLD P+ + + L W + Y + D + LP L Sbjct: 65 RTGSEEGLKSVKAVLDQTPLLSPEMLLLARWMKERYFCTLFDAVRVMLPAGLHYQVAC-- 122 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 Y A + + L+ R + L + + Sbjct: 123 ---SYQAARDIPPEKLEALGDEEKRLIAYLSRCRLPVRRDKLLTALGYEA---DNDLPEH 176 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNT 201 + +R + +RL Sbjct: 177 MSRQGYLEKIDDAFRKIGDAMVKMVRLTE 205 >UniRef50_C6XTX7 Primosomal protein N' n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XTX7_PEDHD Length = 824 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 204/627 (32%), Positives = 320/627 (51%), Gaps = 20/627 (3%) Query: 117 YWFATEQGQAVDLNSLKRSPKQQQ------ALAALRQGKIWRDQVATLEFNDAALQALRK 170 ++ E+ L+R+PKQ L+ + + + AA + L Sbjct: 203 AFYREEENLKQLFTILERAPKQLNALLTFIKLSRQQNLVSKSQLLEESDCGQAAFKTLLD 262 Query: 171 KGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 K + + + N L+ Q A+ I + LL G+T SGK Sbjct: 263 KEIFTVEKRPVSR--LKDNDEDFVLNFELSAAQQQALTGIEMEFERKDVVLLHGITASGK 320 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 T++Y+ ++E + QG Q L ++PEI LT Q + R + F + V HS N++ER+ W Sbjct: 321 TQIYIKLIEKAIEQGGQVLFLLPEIALTTQIVQRIQRYFGDAIGVYHSKFNNNERVEIWN 380 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQ 349 K NG+ +V+G RSA+F PFK L +IV+DEEH+SSYKQQE RY ARD+AVY AH Q Sbjct: 381 KVLNGKYRVVLGARSAVFLPFKELKLIVVDEEHESSYKQQEPSPRYQARDVAVYMAHLHQ 440 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ----AGLAP 405 +LGSATP++E+ N +KY L+ L R G + V+ + + + + + Sbjct: 441 AKTVLGSATPSIESYYNAISQKYGLVTLNERFGGVELPLHEVVSISEETKKKKMVSYFSG 500 Query: 406 ALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHH 465 LI + L+ QVILF NRRG+A L+C CG+ +C CD T H+ L CH+ Sbjct: 501 KLIEGISLALEQKEQVILFQNRRGYATILICATCGYAPKCVNCDVSLTYHKTSGKLHCHY 560 Query: 466 CDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 C + CP+CGS H+ G GTE++E+ L+ +FP I+R+D D+T + L+Q + Sbjct: 561 CGYHQSSINICPACGSVHIEQKGFGTERVEEELSLVFPDAKIARLDVDSTRTRNGLQQLI 620 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 ++ ILIGTQM+AKG F +VTL+ +++ D L DFR+ ER QL QVAGRA Sbjct: 621 SDFQEKKTDILIGTQMVAKGLDFDNVTLIGVINADTLLNYPDFRAFERSYQLLAQVAGRA 680 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR KQG+V++Q + H +++ ++ Y + LAER PP+T + V + + Sbjct: 681 GRRDKQGKVIIQAYDDSHRIIRQVMENQYLEMYKDELAERLQFHYPPFTRLIFVNIKHKD 740 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQH-- 703 + Q+ ++ + VLGP + + + Q++++ +Q Sbjct: 741 QDLLNMAAQRFATILRAQLGP----RVLGPEQPMVARIRNYYIKQVIIKTDKDTSVQKVK 796 Query: 704 -IINGTLALINTIPDSRKVKWVLDVDP 729 ++ T+ + + R V +DVDP Sbjct: 797 SVLKNTILDFQSEKEYRSVNIQVDVDP 823 Score = 109 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 49/222 (22%), Positives = 79/222 (35%), Gaps = 9/222 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ L + + Y +P + V G RV V FGK + ++ ++S + L + Sbjct: 15 FVEVILPLSLAKNYLYRVPFDLNSEVAIGKRVVVQFGKNKIYTALIKTISQTAPR-LYQA 73 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K +++V+D +PV T +L W YY GDV+ ALP L+ A Sbjct: 74 KYIIDVVDEQPVITTLQLQLWDWMTGYYLCNEGDVMSAALPTGLK------LASETIIVL 127 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 E+ + + K R + + + L +K L +A E Sbjct: 128 KEEALQEKVLTEKERILMDALNHQKRLTIADVSALLGQKTVYPIINTLLEKALVYVAEEV 187 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 E V+ E + I A LL Sbjct: 188 VEKYRPLLKSFVALNAFYREEENLKQLFTILERAPKQLNALL 229 >UniRef50_Q1NKU6 Primosomal protein n n=3 Tax=delta proteobacterium MLMS-1 RepID=Q1NKU6_9DELT Length = 820 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 238/812 (29%), Positives = 357/812 (43%), Gaps = 85/812 (10%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV-KAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 P VA+ P+ Y P + + G R+ VP GK+Q G +++ S + ++ Sbjct: 10 PYLEVAVCAPIEHPLTYTPPPEAGILQPGQRLLVPLGKRQI-TGYLLACQQQSPVAGAKI 68 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAA--------- 111 + + VLD EP+F ++ W ADYYHHPIG+++ ALP L + Sbjct: 69 RPALAVLDPEPLFPAAMIPFFRWLADYYHHPIGEIIQSALPAGLDRRSVPVIELTAAGAR 128 Query: 112 -NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWR----------DQVATLEF 160 L + SP + R G R ++ + Sbjct: 129 ALKAPPAAEEAPAWLPELLARGELSPTASARIIKQRGGPFARWRRRGWLQLGHRLRAEKV 188 Query: 161 NDAALQALRKKGLCDLASETPEFSDWR----------TNYAVSGERLRLNTEQATAVGAI 210 + +G + + S+ + + R L + A A+ Sbjct: 189 RPKTETVVIPRGQARQHQPSLKPSEAKTLALLGELAGAEEQPAVPRRELTRQYPGAGRAL 248 Query: 211 H----------SAADTFSAWLLAGVTGSGK-----TE--VYLSVLENVLAQGKQALVMV- 252 F L + TE L+ ++ + G+ A ++ Sbjct: 249 KGLAAHGLVALEQRRLFRDPLGEPPPFFARPAQLTTEQQAVLAAIQPAVTGGRYAPFLLH 308 Query: 253 -----------------------------PEIGLTPQTIARFRERFNAPVEVLHSGLNDS 283 PEI L Q F RF V +LHSGL Sbjct: 309 GVTGSGKTEVYLQAAATALAQGRQVLVLVPEIALATQLEGHFCSRFGDIVALLHSGLAAG 368 Query: 284 ERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVY 343 R W +G+A I IG RSA+F P + G+I++DEEHD +YKQ++ RY+ARDLA+ Sbjct: 369 ARFDQWSLLLSGQAKIAIGARSAIFAPLPDPGLIIVDEEHDPAYKQEDQPRYNARDLALL 428 Query: 344 RAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG- 402 R +Q +ILGSATPA+ + Q K++LL +++R + ++DL+ K +G Sbjct: 429 RGLQQQATVILGSATPAVASFYQAQAGKFKLLTMSKRVEDRPLPAVEIIDLQEVKTVSGR 488 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 +P L+ ++++L A Q ++FLNRRGFA +LC DCG +C C TLH+ + Sbjct: 489 PPLFSPQLVKALKENLAAGRQSLVFLNRRGFANLMLCKDCGRPIQCQHCQVSLTLHKKRG 548 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L CHHC P CP C S LV G GTE+LE+ L+ L P I+R+D+DT+ + Sbjct: 549 QLLCHHCGFHLPRNVVCPHCRSGTLVAAGFGTERLEEELSRLLPSARIARLDQDTSRDRR 608 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 L V ILIGTQM+ KGHHFP VTLV ++ D L D+++AER QL T Sbjct: 609 RYLAVLKAVRDHEIDILIGTQMITKGHHFPQVTLVGIVWADAGLGIPDYKAAERTFQLLT 668 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QV+GRAGR G V++QT +H + Y ++ +A RR + PP+ + + Sbjct: 669 QVSGRAGRGEHPGRVIVQTLQADHYSVALAQAHDYQGLYQREIALRRRLGFPPFGRLINL 728 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV 699 R + N Q L + A + VLGP PA + GR+RWQ+LL+ Sbjct: 729 RLDGENEQRCQELAAGLGEIARRQQPA--TVQVLGPAPAPLARLRGRYRWQLLLKGAEVA 786 Query: 700 RLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + + G A + + VK LDVDP Sbjct: 787 TIHTLCRGICAEFAKLAGASTVKLSLDVDPEN 818 >UniRef50_C5PKC0 Primosomal protein N prime n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=C5PKC0_9SPHI Length = 825 Score = 659 bits (1701), Expect = 0.0, Method: Composition-based stats. Identities = 207/684 (30%), Positives = 337/684 (49%), Gaps = 40/684 (5%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K V +L +F + + ++ Y + + + + Sbjct: 166 KTVFPILKQ--LFDNGFLMISEEISERY-----------------KPKKKNYLILNAEYT 206 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL------EFNDAALQALRKKGLC 174 +G+ L+SL R+PKQQ A+ A Q ++ A++ AL KG+ Sbjct: 207 DTEGKRELLDSLNRAPKQQDAVLAYLQLSKTSSEITRQAIMEAVGCGPASITALIDKGVF 266 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + + + N Q A I+ LL GVT SGKT++Y Sbjct: 267 LVKEKVVSR--FEGEDIELTASFTFNEGQQEAFDQINKLFHNKDVVLLHGVTASGKTQIY 324 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 + ++E +A+GK AL ++PEI LT Q R + F + V HS ND+ER W K Sbjct: 325 IRMIEQAIAEGKSALYLLPEIALTAQITERLKLYFGDQLGVYHSKFNDNERAEVWHKVLK 384 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPII 353 E +VIG RS+LF PF LG+++IDEEH+SSYKQ + RYHARD A+Y + Q I+ Sbjct: 385 NEYKVVIGARSSLFLPFHELGIVIIDEEHESSYKQYDPAPRYHARDTAIYLGYIHQAKIL 444 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALIT 409 LGSATP++E+ N + KY L++L +R G A+ ++++ +K + + L+ Sbjct: 445 LGSATPSIESYYNAKAGKYGLVQLLKRYGTAQLPEIKIVNISEEKRKDNMHSYFSGILLK 504 Query: 410 RMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQ 469 + + + QVILF NRRG P + C+ CG++A+C CD T H+ + + CH+C Sbjct: 505 EIAETIARKEQVILFQNRRGHTPIIQCNTCGYVAKCVNCDVSLTYHKTTNRMHCHYCGHH 564 Query: 470 RPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVH 529 P+ CP+CG+TH+ G GTE++E+ L L P I R+D D+T K ++ + Sbjct: 565 EAPPQICPACGTTHMESRGFGTERIEEELELLMPDARIGRLDLDSTKGKHGFDKIITAFD 624 Query: 530 RGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 ILIGTQM+AKG F V+L+ +++ D + DFR+ ER L++QV+GRAGR Sbjct: 625 EHEYDILIGTQMIAKGLDFGKVSLIGIINADTIINFPDFRAYERAFSLFSQVSGRAGRRD 684 Query: 590 KQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHA 649 G+V++QT+ P H +++ ++ YDA + ER+ Q PP+ + + + + Q Sbjct: 685 SVGKVIIQTYTPNHRVIEQVVAHDYDAMFLEEATERKNYQYPPFYRLIKIDVKHPDIQKC 744 Query: 650 PLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSR----VRLQHII 705 + L + + S+ + V+GP P L + + I L+ +++ ++ Sbjct: 745 FDAARDLASGLRSTLGS----RVIGPEPPLVSRVRNYFIQTITLKIERNNVSIAKVKELM 800 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 + V+ +DVDP Sbjct: 801 QQAILSFELDKSHTGVRIQIDVDP 824 >UniRef50_A8ZRR8 Primosomal protein N' n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZRR8_DESOH Length = 679 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 229/557 (41%), Positives = 315/557 (56%), Gaps = 10/557 (1%) Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD-TFSAWLLAGVTGSGKTEVYLSVLENV 241 D + + L T+Q V + S D F + LLAG+TGSGKTEVY+ V+ Sbjct: 119 PKDAVGDPILPDTPPDLTTDQEAVVADLVSRLDAGFCSCLLAGITGSGKTEVYMRVVAAA 178 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 LA GK ALV+VPEI L Q RF RF V VLHSGL+ +ER W K GEAAI I Sbjct: 179 LAMGKTALVLVPEIALIAQAEHRFCARFGHTVAVLHSGLSRTERWHQWSKIARGEAAIAI 238 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P G+I++DEEHD+SYKQ+ G RY+A DLAV RA ++LGSATP++ Sbjct: 239 GTRSAVFAPLDRPGIIIVDEEHDTSYKQESGLRYNACDLAVVRAKLSDAVVVLGSATPSV 298 Query: 362 ETLCNVQQKKY-RLLRLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQ 416 ++L N K+ + R+ RR V+DL+ Q+ + G ++ L M + L Sbjct: 299 QSLHNATTGKFSKTYRMDRRINRQPLPAITVVDLREQQARRGPRAYISDELHRAMAETLA 358 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 NQV+LFLNRRGFA +C CG +C CD TLH+ + RCH C R R C Sbjct: 359 QGNQVLLFLNRRGFASLPVCAACGNTIKCKHCDISLTLHKGANAFRCHFCGYSRAAARGC 418 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 CGS+ + +GLGTE++E+ + LFP ++R+DRDTT+RKGA+ + L ++ IL Sbjct: 419 DICGSSSIKLLGLGTEKVEEAVKQLFPEASVARLDRDTTTRKGAMLRILKDLKNRKIDIL 478 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKGH FP +TL+ ++ D +L DFR+ ER QL QVAGRAGR G V+L Sbjct: 479 VGTQMIAKGHDFPGITLIGVICADLSLNFPDFRAGERTFQLLAQVAGRAGRGVDPGRVIL 538 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT++P+H + + AF +Q +A RR + PP++ V + + A ++ Sbjct: 539 QTYNPDHLCIAAATRQDGSAFYDQEIAFRRQLGYPPFSRMVHLHISATDPAKAKARAREA 598 Query: 657 RN----LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + L S+P + VLGPV A K R+RWQILL+ S ++ LA Sbjct: 599 GDCCTALKNSAPAVFGAVEVLGPVEAPIHKLASRYRWQILLKSRSAAAVKSFAARLLAQD 658 Query: 713 NTIPDSRKVKWVLDVDP 729 V+ V+DVDP Sbjct: 659 GQRLRKGGVRLVVDVDP 675 >UniRef50_A5V2S3 Primosomal protein N' n=18 Tax=Alphaproteobacteria RepID=A5V2S3_SPHWW Length = 734 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 244/738 (33%), Positives = 359/738 (48%), Gaps = 29/738 (3%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP---L 57 M AHV L P DY V+ G V P G +Q +G+V Sbjct: 13 MARAHVLLLNPALGPLDYRADREHVVEPGSIVLAPLGPRQ-MVGVVWEEETLPSADQVGD 71 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 N L+ +++V D P + RL+ W +DYY P VL ALP Sbjct: 72 NRLRPLLDVYD-VPPLAAPLRRLIEWTSDYYLAPPAAVLRMALPSSSALDGARTIV---- 126 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAAL-RQGKIWRDQVATLEFNDAALQALRKKGLCDL 176 + +A + +P+++QAL + ++ + R+ + ++ ++ L K G + Sbjct: 127 -----EYRATGERPGRMTPQREQALDRIGQRQGLIRELATIADVSEGVIRGLVKSGAIEA 181 Query: 177 ASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLLAGVTGSGKTEVY 234 T + + L+ EQ A G + A F +LL GVTGSGKTEVY Sbjct: 182 V--TVSIDTPWDAPDPDHKAVELSDEQQLAAGMLAEAVAAKRFQPFLLDGVTGSGKTEVY 239 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 + L G+Q LV++PEI LT + RF RF HS L S+R AW + Sbjct: 240 FEAVAEALRAGRQTLVLLPEIALTEPFLKRFEARFGHLPVAWHSELRQSQRRRAWRGIVH 299 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+G RSALF P+++LG+I++DE H++S+KQ++G YHARD+AV RA E+IPI+L Sbjct: 300 GEAKVVVGARSALFLPYRDLGLIIVDEAHETSFKQEDGVLYHARDVAVMRAKLEEIPIVL 359 Query: 355 GSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL--KGQKVQAGLAPALITRMR 412 SATPA+ET +Y L+LT R G A +DL +AP L+ + Sbjct: 360 ASATPAIETRQQATIGRYTELKLTARHGAAEMPEIEAIDLLADPPPRGRWIAPTLVRALA 419 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 L+ Q +LFLNRRG+AP LC CG +CP C + H+ L+CHHC Sbjct: 420 DRLEKKEQSLLFLNRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLLGRLQCHHCGHSMAP 479 Query: 473 PRQCPSCGSTH-LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRG 531 P +CP C LV G G E++ +A LFP ++ DT S + + + G Sbjct: 480 PAECPECKDEDSLVACGPGVERIADEVAALFPDARVAIATSDTLSTPARAAEFVERMEAG 539 Query: 532 GARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ 591 +++GTQ++ KG+HFP++TLV ++D D L D R+AER Q QVAGRAGR K Sbjct: 540 DIDVVVGTQLVTKGYHFPELTLVGVIDADLGLSGGDLRAAERSFQQIAQVAGRAGRGAKP 599 Query: 592 GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPL 651 G V +QTH P+ P++Q LL +F R++ + PP+ + + + A Sbjct: 600 GHVYIQTHAPKAPVIQALLSGDAQSFYTAETEARKIAEAPPFGRYAAIIISAEKLEEAAT 659 Query: 652 FLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLAL 711 LI + A + + V GP PA GR R ++L+ + +Q +I L Sbjct: 660 TA----RLIGRTAPAIDGMHVYGPAPAPLAMLRGRHRQRLLVHARRSLDVQQVIRDWLGP 715 Query: 712 INTIPDSRKVKWVLDVDP 729 + R V+ +DVDP Sbjct: 716 LQ---WPRGVRVAVDVDP 730 >UniRef50_Q9F7S3 Predicted primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=uncultured marine gamma proteobacterium EBAC31A08 RepID=Q9F7S3_PRB01 Length = 662 Score = 656 bits (1693), Expect = 0.0, Method: Composition-based stats. Identities = 241/733 (32%), Positives = 361/733 (49%), Gaps = 75/733 (10%) Query: 1 MP--VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M +A+ +PL + F Y + + G RV VPFGK++ +G+V+ + Sbjct: 1 MKIFYYDIAVSLPLRQCFTYS--SELKITKGTRVSVPFGKRKI-VGVVIKNIQKPDF--- 54 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + V P+ + + Y+ Sbjct: 55 -LKKAGAIKKIIAVLDE------------------------YPLFDKPIFDSILWSSDYY 89 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + + + ALR EF++ ++ Sbjct: 90 HHPIGEVFNTFIPTELRKINNKKIEALR------------EFSEYSVN------------ 125 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 ++ L +Q AV A+ + FS LL GVTGSGKTEVYL V Sbjct: 126 -------------EDDKKFDLTKDQEKAVKALSKSKG-FSPTLLYGVTGSGKTEVYLRVA 171 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 E + K LV+VPEI LTPQ ++RF RFN + + HS ++RL WLKAK G Sbjct: 172 ETFIKNNKSVLVLVPEINLTPQLLSRFENRFNGEIGIYHSKQTAAKRLKTWLKAKFGSIK 231 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I++GTRS+ P N+G+I+IDEEHD S++Q EG+++ ARDL++ RA IPIILGSAT Sbjct: 232 IIVGTRSSALVPLDNIGLIIIDEEHDQSFRQSEGFKFSARDLSIKRAQLADIPIILGSAT 291 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 P+L+TL V++ K+ + + R +P LD+ + G+A I M+ + Sbjct: 292 PSLQTLKLVKENKFIRVDIPNRVDGNKPPKLIALDINNSPLIGGVAKETIEAMQSTIDRG 351 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 QV++F+NRRGFAP C CGW+A+C CD HQA++ L CH C+S V CP+ Sbjct: 352 EQVLVFINRRGFAPLYQCSSCGWVADCKSCDTNLVFHQARNRLICHRCESAYSVNLSCPA 411 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 C S G GTE++E+ L F PI R+D D+T + GA+E + ++H A IL+G Sbjct: 412 CKSNDFNMYGAGTERVEEVLKSSFVKTPIIRVDHDSTKKVGAMEAIVKKIHSSDAAILVG 471 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQMLAKGH FP VTL +L+ D L S + + E+ +QL QV+GRAGR +V++QT Sbjct: 472 TQMLAKGHDFPKVTLSVILNADNGLISPEINALEKISQLLIQVSGRAGRNNNLAKVIIQT 531 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 +P+ L + Y FA Q L+ M LPP+T+ ++R + FL++ Sbjct: 532 RYPDDINLNKIKTGDYMKFASQCLSTNEQMNLPPFTTLCLLRCSSPTQKSNVDFLEKAVL 591 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 ++ + + V+GP+P+L K G +R Q+ + P + L ++ P+S Sbjct: 592 ILSNR----TDINVIGPLPSLVSKSKGNYRHQVYIHAPKKTFLNKVLKFLTTEFEKWPES 647 Query: 719 RKVKWVLDVDPIE 731 KVKW D+DPI+ Sbjct: 648 NKVKWSFDIDPID 660 >UniRef50_C6VSU2 Primosomal protein N' n=3 Tax=Sphingobacteriales RepID=C6VSU2_DYAFD Length = 831 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 211/646 (32%), Positives = 336/646 (52%), Gaps = 28/646 (4%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE------ 159 + + A + + T + + L ++PKQQ+ L + Sbjct: 189 KPKVAKKIRLTAAYTTNEALSKLAADLDKTPKQQEILLKYLSFIPVYNNPELNYKGLDKS 248 Query: 160 -------FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 +DA+L L KKG+ + + A + + L Q A IH Sbjct: 249 IFSQDDTISDASLNTLIKKGIFEQFEVFVSR--FDDIPAGNMGTITLTDTQQEAFRQIHE 306 Query: 213 AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP 272 LL G+TGSGKTEVY+ +++ L G Q L ++PEI LT Q + R R+ F Sbjct: 307 LFAEKEVVLLHGITGSGKTEVYIELIKQALESGSQVLFLLPEIALTTQIVVRLRKVFGDV 366 Query: 273 VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE- 331 + + HS +D+ER+ W +G+ V+G RSA+F PF NLG++++DEEH++SYKQ + Sbjct: 367 MGIYHSKFSDNERVEVWKGILDGKFQFVVGVRSAIFLPFDNLGLVIVDEEHETSYKQHDP 426 Query: 332 GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHV 391 RY+ARD+AV ++ + +LGSATP+LE+ + Q +Y +++ +R GNA + Sbjct: 427 APRYNARDVAVIMSYMHKGKTLLGSATPSLESYFHAQSGRYGFVQMKQRYGNAALPRFEL 486 Query: 392 LDLKGQKVQ----AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 +D K +K Q + L++ + +L+ Q ILF NRRG++P L C +C WI+EC Sbjct: 487 IDTKKEKRQKQMKNEFSSVLLSHLEYNLKNKEQTILFQNRRGYSPYLQCEECNWISECAN 546 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T H LRCH+C + VPR CP CGS + +G GTE++E+ + ++P + Sbjct: 547 CDVSLTYHMKARELRCHYCGHKEEVPRTCPHCGSPKVKTMGYGTEKIEEEINVMYPEARV 606 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R+D DTT K A +Q +++ GG IL+GTQM++KG F +V++V + D D + + Sbjct: 607 QRMDLDTTRAKNAYQQIISDFEEGGIDILVGTQMVSKGLDFDNVSVVGIFDADRIIHFPE 666 Query: 568 FRSAERFAQLYTQVAGRAG-RAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERR 626 FR++ER Q+ TQV+GRAG RA K G+V++QT +P PLL+ ++ Y+ E +AER Sbjct: 667 FRASERAFQMLTQVSGRAGRRADKPGKVLIQTANPSQPLLEKIINNDYEGMYEAEIAERE 726 Query: 627 MMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGR 686 PP+T + V + + A + L + S A VLGP P L + + Sbjct: 727 KFSYPPFTRLIKVTVKHIDEGTALRAAKVLAEKLTSHLGAS---RVLGPQPPLVERVRNQ 783 Query: 687 WRWQILLQHPSR----VRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + + IL++ + I + T + ++ V+DVD Sbjct: 784 FLFDILIKLEREKINFKAAKSFIQEKVIDTLTDKTLKSIQVVIDVD 829 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 47/222 (21%), Positives = 84/222 (37%), Gaps = 9/222 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A + LPVP+P F Y +P M +K G RV V FG+++ +V + + + Sbjct: 12 FADLILPVPIPNLFTYRVPREMASLIKVGARVIVQFGQKRVITAVVAQLHSNPPVK-YQA 70 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++E+LD +P+ T L W A+YY IG+V+ ALP L+ Sbjct: 71 KYILELLDEQPIVTQQQLELFAWVAEYYLCNIGEVMNVALPAGLK------ITSQSRIQL 124 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + + DL + + ++ +++ + +++L K L E Sbjct: 125 NPEFEHEDLLTDQEQLVVEEIKKHQTLSYEEVERLLQKSNITSIIKSLVGKRAVILYEEV 184 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 E + + E + + A LL Sbjct: 185 KERYKPKVAKKIRLTAAYTTNEALSKLAADLDKTPKQQEILL 226 >UniRef50_C5CEQ5 Primosomal protein N' n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CEQ5_KOSOT Length = 759 Score = 655 bits (1691), Expect = 0.0, Method: Composition-based stats. Identities = 205/763 (26%), Positives = 357/763 (46%), Gaps = 63/763 (8%) Query: 11 PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSE 70 PL TF Y + G RV V F + + VV ++D ELP K V++ LD + Sbjct: 7 PLLDTFTY--HTDFPLTPGERVVVDFANRSV-VAYVVEITD--ELPEFATKPVLQKLDEK 61 Query: 71 PVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL------------------------RQ 106 P T L L ++ + P+G + P Sbjct: 62 PFLTSKDVELALRISERFLCPVGKIFDLFFPPGKVMNVKSFVVPQSQELPIKDIIPLTAA 121 Query: 107 GRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQ 166 + W + + + V K++ Q++ LR +++ + ++ Sbjct: 122 REKFGAVTIENWKKSRKIRIVHSYEQKKTRVQKKKFVRLRLSIKDLEKIKLTDLQRKVVE 181 Query: 167 ALRKKGLCDLAS----------------------ETPEFSDWRTNYAVSGERLRLNTEQA 204 L + ++ E E + + L +EQ Sbjct: 182 HLFSFDVIEVRELIKNLDLKSISPIQTLEKKGILEVFEDETYEFSDWTIAPIDELTSEQR 241 Query: 205 TAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIAR 264 + +I L+ G+TG+GKTEVY +E VL +G Q L +VPE+ LTPQ +AR Sbjct: 242 RVLNSIVYDF--KGVHLIYGLTGTGKTEVYFKAMEKVLTEGAQVLYLVPEVSLTPQLLAR 299 Query: 265 FRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 + F V V HS L+ ++R WL A G I+IGTRS+++ P + LG+I++DEEH Sbjct: 300 VKGTFPGREVRVYHSYLSKAKRQGIWLDAHEGNVDIIIGTRSSIWIPMRKLGLIIVDEEH 359 Query: 324 DSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN 383 D+S+ QQ Y A ++AV + IPIILGSATP + + +Y+L +L R Sbjct: 360 DASFYQQSSPHYDAVEVAVEKGKLHNIPIILGSATPRVTHYFRAIEGEYKLHKLKHRPVG 419 Query: 384 ARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIA 443 + ++D++ K L+ + +++ L+ + Q+ +F++R+GF+ ++C +CG + Sbjct: 420 -KLPSLELIDMRKSKGFYVLSKKALEEIKELLKDEKQIFVFVHRKGFSNYVVCTNCGTVI 478 Query: 444 ECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFP 503 +CP CD T H+ + L+CH+C P CP+CGS L G GTE++E L FP Sbjct: 479 KCPNCDISLTYHRHGNILKCHYCGFTTPPFSNCPNCGSAALSARGFGTERVEYELRNFFP 538 Query: 504 GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGAL 563 V I R+D++T E+ L + + A++++GT+M+AKG FP V V ++D D + Sbjct: 539 SVKIIRLDKETIESPSDYEKALRMIEQEDAQVVVGTKMIAKGLDFPKVGCVIVVDSDRLI 598 Query: 564 FSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALA 623 + + E QL TQ +GR+GR G+ ++Q+ +P+HP++Q + ++ F E + Sbjct: 599 NLPRYDATENAFQLITQASGRSGRGTF-GKTLIQSFNPDHPVIQNAVENDFERFFETEIK 657 Query: 624 ERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKR 683 R +++ PP++ V + E + + +++ LI +++ + GPV + K Sbjct: 658 TRELLKYPPFSYFVEMIVEHVDEKRCQKKAEEIAELIGKE-FSEQFFEIHGPVVPVIKKF 716 Query: 684 GGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLD 726 GR+R +I L+ ++ + + S ++ V+D Sbjct: 717 KGRFRMKIFLKLKPEASMKE-LRELIK-----KHSAQIDLVVD 753 >UniRef50_Q0EYL3 Primosomal protein n` n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EYL3_9PROT Length = 705 Score = 653 bits (1684), Expect = 0.0, Method: Composition-based stats. Identities = 258/733 (35%), Positives = 356/733 (48%), Gaps = 32/733 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M VA+ PLP F Y P G RV+VPFGK RIG+V+ +SD E Sbjct: 1 MLCIEVAVFSPLPGCFSYSWPPEFGEPAVGIRVQVPFGKG-TRIGVVLRLSDTLP-DSVE 58 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V + LD P++ S + + YY GD AL A P Sbjct: 59 LKPVADRLDVSPLYDASRIQWVERVRRYYLASSGDAWQTALAWAAHDQVRAFRCPDVAVL 118 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 A + + +R+ + AL+ E Sbjct: 119 AKAAPALAAVFTSRRA---------------LSLKTIAARIEPCALRHCLNTACQAGLLE 163 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 L L QA+AV + A F +LL G TGSGKTEVYL Sbjct: 164 EVLHEPLLQQNESIPAALTLTDAQASAVQMLV-DARGFQPFLLFGRTGSGKTEVYLRAAS 222 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 + +G + LV+VPEIGLTP IAR + RF A V V HS L + +RL+ + I Sbjct: 223 ESIRRGGRVLVLVPEIGLTPMWIARLQSRF-ARVAVWHSALTERDRLAVRQHLA--QTDI 279 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 +IGTRSALF P +L +IV+DEEHD S+KQQ+G Y ARD+AV A IPI+LGSATP Sbjct: 280 LIGTRSALFLPLPDLAMIVVDEEHDGSFKQQDGMAYSARDMAVLLAQQLDIPIVLGSATP 339 Query: 360 ALETLCNVQQKKYRLLRLTRRAGN-ARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQAD 418 +LE+ Y+ + L R + + ++D++ V ++PAL+ M+Q L A Sbjct: 340 SLESWRQALAGLYQRIDLPSRIADHTQQIKPEIIDMR--AVDGPVSPALLAAMQQTLAAG 397 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 +Q ILFLNRRG++P+L C CG + +CP C TLH+ LRCH C R PR C Sbjct: 398 DQTILFLNRRGYSPSLQCTACGDVPQCPACSLSLTLHRRAGQLRCHSCGFIRRAPRSCEC 457 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CG L+P+G GTE++E+ L P + SR DRD + L + LA R L+G Sbjct: 458 CGEAALMPMGEGTERIEEWLQQHIPDLRFSRFDRDVVTSHARLSEILAAFERRELDCLLG 517 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQML KGH FP VTLV +++ D + DFR+ ER+ Q TQV GRAGR K G +++QT Sbjct: 518 TQMLVKGHDFPHVTLVGVVNADQGMNMPDFRAGERWWQQMTQVTGRAGRGEKAGRMLIQT 577 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+ LQ + +A L R M+Q PP+ V V + A Sbjct: 578 RMPDAAWLQRIAEAQAEATMTAELELREMLQYPPFARWVRVVFSAMRAERADQAAAAFAE 637 Query: 659 LILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDS 718 S A +L V GP+P + GR+R+++LL+ +R L L +++++ Sbjct: 638 ----SCRAISELMVSGPMPCAMERLAGRFRFEVLLRDTTRQLLP---WKLLPVLDSLKVP 690 Query: 719 RKVKWVLDVDPIE 731 V+ +DVDP + Sbjct: 691 SGVRRRVDVDPQD 703 >UniRef50_P74397 Primosomal protein N' n=13 Tax=Cyanobacteria RepID=PRIA_SYNY3 Length = 831 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 227/654 (34%), Positives = 331/654 (50%), Gaps = 24/654 (3%) Query: 92 IGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQG--- 148 + L L + + S K + Q + L L+ Sbjct: 184 LTKALRDLLKRQWVESYLEPPKAVQPQLPKMVTLLNFDPSFKLTELQARTLIVLKNQGGE 243 Query: 149 KIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVG 208 D + + + + +Q+L KKGL +A ++ + + L Q A Sbjct: 244 MWLADLLKAVPCSASTIQSLAKKGLVAIAEREKLR-LFQQPSINASQAPELTPAQKQACQ 302 Query: 209 AIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRER 268 + + LL GVTGSGKTEVYL + + L +G+ LV+VPEIGLTPQ RFR R Sbjct: 303 TVL-PLQGYHQVLLHGVTGSGKTEVYLQICGDRLGKGQSVLVLVPEIGLTPQLTDRFRAR 361 Query: 269 FNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYK 328 F V V HSGL+ E+ W + G IVIGTRSA+FTP NLG+I++DEEHDSS+K Sbjct: 362 FGNKVAVYHSGLSSGEKYDTWRQTLLGHEQIVIGTRSAIFTPLPNLGLIILDEEHDSSFK 421 Query: 329 Q-QEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ----KKYRLLRLTRRAGN 383 Q Q YHAR +A RA EQ P+ILGSATP+LE+ V + + L L R + Sbjct: 422 QTQLTPNYHARTVAQRRAELEQCPLILGSATPSLESWHTVHRHQNDPQRHYLELPERVQS 481 Query: 384 ARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 ++D++ + Q + AL T + + Q ILF+NRRG + + C CG Sbjct: 482 RPLPPVQIVDMRAELKQGNRSIFSRALQTALGELKAKQQQGILFINRRGHSTFVSCRSCG 541 Query: 441 WIAECPRCDHYYTLHQAQH----HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 ++ ECP CD + H Q LRCH+C+ P+ CP C S +L G GT+++ + Sbjct: 542 YVLECPNCDVSLSYHYVQGNGQPLLRCHYCNHAEIQPKVCPECSSPYLKFFGSGTQKVTE 601 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L FP + R D DTT RKGA L + RG A +L+GTQML KG +TLV + Sbjct: 602 ALTQEFPDLRWIRFDSDTTRRKGAHRALLDQFQRGEADLLVGTQMLTKGLDLAQITLVGV 661 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 + D L AD+RSAER Q TQV+GRAGR + G+V++QT+ P HP++Q + Y Sbjct: 662 VAADSLLNFADYRSAERGFQTLTQVSGRAGRGEEPGQVIIQTYTPRHPVIQAVKTHNYHG 721 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F Q L +R M+ PP+ +++R N + +Q + +L L + + +LGP Sbjct: 722 FIAQELPQREMLNYPPYGKLILLRCLGTNEREVEKTIQAIA--VLCEQLLPKTVEILGPA 779 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 PA + R+RWQ+L+++PS +++ + + V +DVDP+ Sbjct: 780 PASILRIAQRYRWQLLVKYPSFIKVILPLERIKQIC-----PSSVYLDIDVDPL 828 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 10/220 (4%) Query: 2 PVAHVALPVPLP-RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLN 58 P A V + +P + Y +P G+TV+ G V VPFG QQ GIVV +LP Sbjct: 23 PWAAVLVDLPQNEGVYTYAIPPGLTVQDGDIVAVPFGNQQ-LGGIVVGCLTKLPPDLPPE 81 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 ++K + +V+ S F WRLL W A+YY + V+ ALP L Q Sbjct: 82 KIKPIQDVIVSG-FFAPHYWRLLHWLAEYYCTELITVIRMALPPGLLQRSQRRIKLNGDR 140 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATL-EFNDAALQALRKKGLCDLA 177 ++ + S + + + L + ++G + AL+ L K+ + Sbjct: 141 LPSDWPLFLSQPSHQGARQILTLLQSSKEGDYSYRYLRQKVPGLTKALRDLLKRQWVESY 200 Query: 178 SETPEFSDWR----TNYAVSGERLRLNTEQATAVGAIHSA 213 E P+ + +L QA + + + Sbjct: 201 LEPPKAVQPQLPKMVTLLNFDPSFKLTELQARTLIVLKNQ 240 >UniRef50_B5ZDR1 Primosomal protein N' n=26 Tax=Alphaproteobacteria RepID=B5ZDR1_GLUDA Length = 759 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 251/745 (33%), Positives = 358/745 (48%), Gaps = 32/745 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKA---GCRVRVPFGKQQERIGIVVSVSDASE---- 54 P V LP+P P FDY P + G V VP G++ E G+V Sbjct: 28 PRVAVLLPLPFPGPFDYAAPPDLPAPPLQPGDIVTVPLGRRTE-TGVVWDPERNLPPEFT 86 Query: 55 ------LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR 108 + LK V+ LD +P S+ R + W A Y P G VL A LR G Sbjct: 87 PPPMKSVADGRLKPVIARLD-QPPLPASLRRFVDWVAAYTLSPPGLVLAMA----LRTGT 141 Query: 109 PAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQAL 168 A AP W + + +R A + + ++ L Sbjct: 142 AAQAAPALGWAVADPPPGLRDTPARRRVLDIA---AHDGPLTAAELARRAGVGTSVVRGL 198 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGS 228 G + TP + R + L ++ +A FS LL GVTGS Sbjct: 199 ADAGALRGVTMTPRPAFVRPDPDHCPPALDGEQAESARALRALAAEGGFSVTLLEGVTGS 258 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTE+Y+ + LA+GKQ +V++PEI L+ Q RF RF A + HS L R Sbjct: 259 GKTEIYMEAIAACLARGKQVMVLLPEIALSSQWTGRFARRFGAEPALWHSDLGPRLRRVT 318 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W +G A +V+G RSALF PF LG+I++DEEH++++KQ++G YHARD+AV RA + Sbjct: 319 WHAVADGTARVVVGARSALFLPFAELGLIIVDEEHETAFKQEDGVTYHARDMAVVRARMD 378 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPA 406 + P++L SATP+LETL NV +YR L LT R G A +D++ + G L+P Sbjct: 379 RAPVVLVSATPSLETLANVGAGRYRHLVLTARHGGATMPEVRTIDMRAHPPERGLFLSPV 438 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 L +RQ + Q +LFLNRRG+AP LC CG +CP C + H+A+ L CHHC Sbjct: 439 LTEAIRQAIGRGEQGMLFLNRRGYAPLTLCRTCGHRLQCPNCTAWLVEHRARQILTCHHC 498 Query: 467 DSQRPVPRQCPSCGST-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 Q P CP C + L P+G G E++ + FP I + DT A + Sbjct: 499 GYQEATPPACPECHAESSLTPIGPGVERITEEARATFPDARILVMASDTLPGPAATADAV 558 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 A + R ++IGTQ++AKG HFP +TLV ++D D L D R+AER QL QVAGRA Sbjct: 559 ARIARREIDLVIGTQIVAKGWHFPHLTLVGVVDADLGLGGGDLRAAERTVQLLHQVAGRA 618 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GRA G V+LQ++ P+HP++ L+ +++F Q +RR PP+ + Sbjct: 619 GRAEAPGTVLLQSYTPDHPVMLALVSGDFESFMRQEAEQRRPGFWPPFGRLAALIVSADT 678 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + A + L + L VLGP PA GR R ++LL+ V +Q ++ Sbjct: 679 PEAADATARALGQAAPR----GDSLQVLGPAPAPLAILRGRHRRRLLLRTRREVAVQPLL 734 Query: 706 NGTLALINTIPDSRKVKWVLDVDPI 730 L + R + +D+DP+ Sbjct: 735 RQWLDRV---TPERGARIDIDIDPV 756 >UniRef50_UPI0001C36ED7 primosomal protein N'''' n=1 Tax=Ruminococcus flavefaciens FD-1 RepID=UPI0001C36ED7 Length = 814 Score = 651 bits (1680), Expect = 0.0, Method: Composition-based stats. Identities = 208/692 (30%), Positives = 329/692 (47%), Gaps = 18/692 (2%) Query: 48 SVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG 107 ++SD + L +LK + + V + + D + + Sbjct: 125 ALSDEAHELLEKLKEIPDNKSLNEVLENYILENGRRLPDELCDAGAMDSDNIFRQAVGDA 184 Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQ--QALAALRQGKIWRDQVATLEFNDAAL 165 + + + S +PKQ+ + ++ A + Sbjct: 185 AVRMVRLSDKYLSEPE-------SFDLTPKQKIVADFLSEYGAAAEKEAAYMCGVTQAVV 237 Query: 166 QALRKKGLCDLASETPEF-SDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DTFSAWLL 222 + L G + + + + L+ EQ +A A+ SA +A+LL Sbjct: 238 KRLIAGGAAAEYDMEVFRHVEDGSEEKCDPDEIVLSDEQQSAHDAVLSALFDRKAAAFLL 297 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 GVTGSGKT V+ ++ + + G+QA++++PEIGLTPQ + RFR F V V+HSGL+ Sbjct: 298 HGVTGSGKTSVFEKLISDTVKMGRQAMLLIPEIGLTPQILRRFRSLFGERVAVIHSGLSQ 357 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 +RL + + KNG A IVIGTRSA+F P N+G+I++DEE + SYK RY D+A Sbjct: 358 GQRLDEYKRIKNGSADIVIGTRSAVFAPLDNIGIIIVDEEGERSYKSDSSPRYMTHDIAR 417 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 +R + ++L SATP++E+ ++ YRLL + +R + ++D+ ++ Sbjct: 418 HRCGYHKAVLLLASATPSVESYYLAEKGVYRLLEMNKRYSTSPLPEVSIVDMNLEREDGN 477 Query: 403 ---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH 459 + L + ++L Q IL LNRRG+ + C DC CP C T H+ Sbjct: 478 RTEFSRKLAEELSRNLANGEQSILLLNRRGYHTVISCCDCYQPVYCPNCSVPLTYHKKND 537 Query: 460 HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKG 519 L CH+C CPSCGS L +G GT++LE+ LA FP + R+D DTT + Sbjct: 538 KLMCHYCGYVSERITVCPSCGSERLRNMGFGTQKLEEELAVYFPQARVLRMDADTTFSRY 597 Query: 520 ALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYT 579 + E+ A+ G I+IGTQM+ KG FPDVTLV +L VD ALF+ DFRS ER L T Sbjct: 598 SYEKNFADFRDGKYDIMIGTQMIGKGLDFPDVTLVGVLSVDKALFAGDFRSYERTFSLIT 657 Query: 580 QVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIV 639 QV GR+GR +QG +LQT PEH ++ + Y F + +A RR M PP + Sbjct: 658 QVVGRSGRGERQGRAILQTFMPEHYIMNLAAAQDYKGFYNEEIAIRRAMIFPPVCDMAVF 717 Query: 640 RAEDHNNQHAPLFLQQLRNLILSSP---LADEKLWVLGPVPALAPKRGGRWRWQILLQHP 696 ++ + L+ + VLGPV A + G++R++I+++ Sbjct: 718 CFAANDEVSVQKGADAVLALMKEKLDRMQPKTPIRVLGPVRASYGRINGKFRYRIIMKCK 777 Query: 697 SRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + ++ I+ L + D + V D++ Sbjct: 778 NNAEIRGFISSLLTEAADLKDMKGVSLYADMN 809 >UniRef50_C3Q6Q1 Primosomal protein N n=14 Tax=Bacteroidales RepID=C3Q6Q1_9BACE Length = 820 Score = 648 bits (1671), Expect = 0.0, Method: Composition-based stats. Identities = 214/692 (30%), Positives = 335/692 (48%), Gaps = 46/692 (6%) Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 LK V+ V+ + + + Y + R A + Sbjct: 154 LKNVLTVI--KSLLDKEAIFVKEELKRNY-----------------KPRTEARVRLVNGE 194 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAAL------------RQGKIWRDQVATLEFNDAALQA 167 A E N L R+PKQ L + ++ + + A Sbjct: 195 ADEAYLQRLFNELSRAPKQLMILMKYVELSGWVTKGYALKEVTKKELLEKSGGSVAVFNG 254 Query: 168 LRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTG 227 L +K + ++ + D +G+ LN Q A I + LL GVT Sbjct: 255 LVEKKVFEVYHQEIGRLD--KGILDTGDINPLNIAQQQAYSNILQCFREKNVCLLHGVTS 312 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTE+Y+ +++ VL GKQ L ++PEI LT Q R + F + + HS D+ER+ Sbjct: 313 SGKTEIYIHLIQEVLKTGKQVLYLLPEIALTTQITERLKRVFGHRLGIYHSKFPDAERVE 372 Query: 288 AWLK-AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRA 345 W K +++G RS++F PF+NLG+++IDEEH+++YKQQ+ RYHAR A+ A Sbjct: 373 IWQKQLGEKSYDVILGVRSSIFLPFRNLGLVIIDEEHENTYKQQDPAPRYHARSSAIMLA 432 Query: 346 HSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG----QKVQA 401 + ++LG+ATP +ET N KY L+ L R + R ++D+K +++Q Sbjct: 433 SMFKAKVLLGTATPGVETYFNATSGKYGLVELKERYKDIRLPHIELVDIKELAHQKRMQG 492 Query: 402 GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHL 461 +P L+ ++++ L+ QVILF NRRGFAP + CH CGW+ +C CD T H+ + L Sbjct: 493 PFSPVLVKQIKEALERKEQVILFQNRRGFAPMIECHTCGWVPKCKNCDVSLTYHKGLNQL 552 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 CH+C VPR CP+CG L+ G GTE++E + +FP ++R+D DTT + A Sbjct: 553 TCHYCGYTYQVPRSCPACGGVELMHRGFGTERIEDDIKLIFPEAKVARMDLDTTRTRTAY 612 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 E+ + G ILIGTQM++KG F V++V +L+ D L DFRS ER QL QV Sbjct: 613 EKIITNFELGKTDILIGTQMVSKGLDFDHVSVVGILNADTMLNFPDFRSYERAFQLMAQV 672 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGR KQG V+LQT P+ P++ +++ Y+ LAER+M + PP+ + V Sbjct: 673 AGRAGRKNKQGLVILQTKSPDLPVIHQVIHNDYEQLYYDQLAERQMFKYPPYYRLIYVYL 732 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + L + + S VLGP + + +++++ + Sbjct: 733 KHRKEDVLDLAADTMAAQLRSGLGD----RVLGPDKPPVARIQTLFIKKMIVKVEQNASI 788 Query: 702 QHIINGTLALINTIPDSRKVK---WVLDVDPI 730 + + + LA+ I + + + DVDP Sbjct: 789 KKVRDYLLAVQRAILEDERFRSLLVYYDVDPQ 820 Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats. Identities = 55/231 (23%), Positives = 87/231 (37%), Gaps = 9/231 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 V +P+P+ + Y LP+ M V+ GCRV VPFGK++ IV +V A+ E Sbjct: 3 KFVDVIVPLPIANQYTYSLPQEMEEMVQIGCRVIVPFGKKKFYTAIVTNVHYAAP-EGYE 61 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 K + EVLDS PV + W A+YY +GDV A+P ++ + Sbjct: 62 TKDIAEVLDSSPVLLPKQYEFWQWLAEYYLCTLGDVYKAAIPSGMKLESETLVEYNPDFE 121 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 T + L + + Q ++ + L+ +++L K + E Sbjct: 122 TTAPLPEKEQKILDLLSRDTE------QCVTQLEKNSGLKNVLTVIKSLLDKEAIFVKEE 175 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 RT V + + S A L+ V SG Sbjct: 176 LKRNYKPRTEARVRLVNGEADEAYLQRLFNELSRAPKQLMILMKYVELSGW 226 >UniRef50_B8EQ16 Primosomal protein N' n=43 Tax=Alphaproteobacteria RepID=B8EQ16_METSB Length = 744 Score = 647 bits (1669), Expect = 0.0, Method: Composition-based stats. Identities = 247/746 (33%), Positives = 357/746 (47%), Gaps = 32/746 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 V V PV + + Y+ P M + G V P G ++ IG+V + A N L+A Sbjct: 10 VVDVLFPVAVDTAYSYVAPAAMGLVPGAFVEAPLGPRRA-IGVVFAQRPAPPGASN-LRA 67 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 V LD P + + W A + P G VL A+ + A Sbjct: 68 VAARLDISP-LGDRLRDFIDWVARWGMSPRGMVLRMAIRAPFHAAPEPKRVGLRLTGAAP 126 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQG--KIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + +P +++ LAA + G + + + L ++G+ L + Sbjct: 127 A---------RLTPARERTLAAAQAGGLMTKAALAKAAGVSASVIDGLIRQGVFTLETLA 177 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 PE + + L + A A A A +FS LL GVTGSGKTE Y + Sbjct: 178 PEPAAPVGDPDFRQPLLSQDQAAAAAELAKAVLAQSFSVTLLEGVTGSGKTETYFEAIAA 237 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 L G+Q LV++PEI LT Q + RF RF A HSG+ + R W +GEA I+ Sbjct: 238 ALRAGRQTLVLLPEIALTSQFVDRFGARFGAAPVEWHSGIGAARRARIWSAVASGEAKII 297 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 IG RSALF PF++LG++++DEEHD +YKQ++G YHARD+AV R EQ +IL SATP+ Sbjct: 298 IGARSALFLPFQSLGLVIVDEEHDGAYKQEDGVVYHARDMAVVRGRIEQCAVILASATPS 357 Query: 361 LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK--GQKVQAGLAPALITRMRQHLQAD 418 +ET N Q +YR L L R G +D++ ++PALI + +L Sbjct: 358 IETRVNADQGRYRRLVLKDRFGGRAMPKIEAVDMRLKPPPRGKWISPALIAALADNLGKG 417 Query: 419 NQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q +LFLNRRG+AP LC CG +CP C + H+ + L CHHC P CP+ Sbjct: 418 QQSLLFLNRRGYAPLTLCRSCGHRFQCPNCAAWLVDHRFRKALICHHCGHMERRPELCPN 477 Query: 479 CGS-THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILI 537 C + L+ G G E+LE+ A LFP + + D L + V RG I+I Sbjct: 478 CEAVESLMACGPGVERLEEEAAELFPDARLMILSSDLAGGAERLRAEFEAVARGACDIVI 537 Query: 538 GTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQ 597 GTQ++AKGH+FP +TLV ++D D L S D R+AER QL QV GRAGR G ++Q Sbjct: 538 GTQLVAKGHNFPGLTLVGVIDADIGLTSGDPRAAERTFQLLQQVTGRAGRFETPGRALVQ 597 Query: 598 THHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLR 657 + PEHP+++ +L + F + + +RR LPP+ + ++ A F + L Sbjct: 598 SFQPEHPVMRAILSGDSEKFYAEEIEQRRRAGLPPFGRLAALIVSGNDAASAEAFARALA 657 Query: 658 NLILSSP-------------LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 P + +L +LGP A GR R+++L++ P LQ Sbjct: 658 RAAHDLPRSDGWTLAAAGGLPTEGELSLLGPAEAPIAILRGRHRFRLLIRAPRSSDLQGF 717 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 +N LA P V +D+DP Sbjct: 718 LNALLAA--GPPQRGGVNAAIDIDPQ 741 >UniRef50_B1C5S0 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C5S0_9FIRM Length = 809 Score = 645 bits (1665), Expect = 0.0, Method: Composition-based stats. Identities = 201/649 (30%), Positives = 322/649 (49%), Gaps = 12/649 (1%) Query: 87 YYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR 146 YY + + N + E + K + KQ + +L Sbjct: 165 YYLSKRNIIKKEVI---YHVKEEKMNEIISLSGKYETIEEYLSCIRKNATKQVSVIKSLE 221 Query: 147 QGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATA 206 +G + + + + + + + + + + + + LN EQ Sbjct: 222 KGPLLYETLIHKTEANRGIITKLEDLELIKSEFREKNDELDLSIPEEDKEVELNDEQKKV 281 Query: 207 VGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFR 266 + I+ + + +LL GVTGSGKTEVY+ + + + +GKQ L +VPEI LTPQ + Sbjct: 282 LN-IYLNEENTNKFLLHGVTGSGKTEVYIKMFKEQINKGKQCLFLVPEIALTPQMMRNIY 340 Query: 267 ERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSS 326 +F+ V ++HS L ++R+ W K ++G+A IV+G RSALF PFK+LG+IVIDEEH+++ Sbjct: 341 YKFDGDVAIMHSKLTMAKRIKEWDKVRSGKAKIVLGARSALFMPFKDLGLIVIDEEHENT 400 Query: 327 YKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARP 386 YK + RY +LA + ++LGSATP++E+ + +YRLL + RA Sbjct: 401 YKSSQTPRYETIELANFICDGIGAKLVLGSATPSVESYYKAFKGEYRLLEMENRANGKDF 460 Query: 387 AIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIA 443 ++D+ + ++ L ++R+ L Q+ILF+NRRGF+ + C CG+I Sbjct: 461 PEVQIVDMTDEMRSGNRSSISRTLSKKIRERLDRKEQIILFMNRRGFSTYVFCRKCGYIE 520 Query: 444 ECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFP 503 ECP CD T H + LRCH+C ++ P CPSCGS + G GT+++E + LFP Sbjct: 521 ECPNCDVSLTYHANTNSLRCHYCGYEKRAPEVCPSCGSDKIKRAGTGTQKVEAAVRELFP 580 Query: 504 GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGAL 563 I R+D DTT + G++E+ L++ A ILIGTQM+ KGH F +VTLV +L D AL Sbjct: 581 DAKILRMDFDTTRKAGSMEKILSDFREEKADILIGTQMVVKGHDFANVTLVGILLADTAL 640 Query: 564 FSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALA 623 D S +R QL TQ +GRAGRA K+GEVV+QT+ P + L Y +F + Sbjct: 641 NFPDINSPQRTFQLCTQASGRAGRASKEGEVVMQTYMPNNKTLVYSSMHDYKSFYAYDIE 700 Query: 624 ERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS--SPLADEKLWVLGPVPALAP 681 R M PP+T + + + + + + + I E + + P+ A Sbjct: 701 YRMKMNYPPFTEILGIFVANEDENKSVEHINHVYKRIEELLKEKNREDVKLYQPMDAFIH 760 Query: 682 KRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 K ++ ILL++ ++ + N I +V+P+ Sbjct: 761 KLKNKYIMHILLRYNKDDEIK---KEIRNIFNDIKREVDSNVFAEVNPV 806 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/238 (18%), Positives = 90/238 (37%), Gaps = 12/238 (5%) Query: 3 VAHVALPVPL----PRTFDYLLPEGM--TVKAGCRVRVPFGKQQERI-GIVVSVSDASEL 55 +A+V + L + +DY +PE + + G RV V FG+ + +V+ +S+ S+ Sbjct: 2 IANVLIDT-LGAIGDKIYDYKIPENLIDETEIGKRVLVYFGRGSNLVPALVIGLSETSDY 60 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 ++LK + E+LD E + + ++ + D Y D L +P L + R + Sbjct: 61 DNDKLKEINEILDDEVIVQSYLIDMIKYMRDNYFCTYVDALRCVIPSLEQVKRKEIYTYI 120 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG-LC 174 + L+ + + + + KI ++++ + + ++K+ Sbjct: 121 ENDKEIKDEYKYILDLIIKRKGEASFDYIKTKLKISKEELKEHIYYLSKRNIIKKEVIYH 180 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 + E Y E L+ + A + LL T KTE Sbjct: 181 VKEEKMNEIISLSGKYETIEE--YLSCIRKNATKQVSVIKSLEKGPLLY-ETLIHKTE 235 >UniRef50_B0MPQ1 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MPQ1_9FIRM Length = 824 Score = 644 bits (1662), Expect = 0.0, Method: Composition-based stats. Identities = 191/663 (28%), Positives = 311/663 (46%), Gaps = 12/663 (1%) Query: 73 FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSL 132 F +L+ ++ + L + + Y + + L Sbjct: 163 FDEQQKKLIGRLSEK---SVLVSLDIIKQRVGSETEKNVRLTDSY--LSGEYADKGGKPL 217 Query: 133 KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAV 192 K+ ++ A + + K G+ + S AV Sbjct: 218 TAKQKKVADFLTDADSASVKEVCYNCVVTSAVINNMEKNGIVECFDNEVSRSLTAGAKAV 277 Query: 193 SG-ERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQAL 249 + + L+ EQ+ + D LL GVTGSGKT V+L +++ L QGK AL Sbjct: 278 RSIDDIVLSDEQSAVYSGMSELMDSGKPQCALLKGVTGSGKTTVFLKLIDKALKQGKTAL 337 Query: 250 VMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 ++VPEI LTPQ + F + F + V V+HS L+ +R + + + GEA IVIGTRSA+F Sbjct: 338 MLVPEISLTPQMVRNFTDLFGSNVAVIHSNLSLGQRTDEYKRIEKGEARIVIGTRSAVFA 397 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 P N+G+IVIDEE + +YK ++ RY AR +A R ++L SATP+LE+ Sbjct: 398 PLDNIGIIVIDEEGEHTYKSEKSPRYQARSIAKQRCFYHNATLLLASATPSLESAYFASI 457 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDLKGQKV---QAGLAPALITRMRQHLQADNQVILFLN 426 +Y+L + +R +++D+K + ++ + AL ++ +LQ Q IL LN Sbjct: 458 GRYKLFEMKKRYSQPVLPDVYLVDMKVEVETGNRSNFSRALADEIKNNLQRGEQTILLLN 517 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 RRG+ + C CG + +CP C+ T H+ + + CH+C +C SCGS + Sbjct: 518 RRGYNTYMNCIKCGEVYKCPNCNIPLTYHKTNNCMICHYCGYTEVFTGKCKSCGSKFIYS 577 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G GT+++E ++ LFP + R+D DTT K + E+ + G I++GTQM+AKG Sbjct: 578 TGTGTQRIEDEISTLFPSARVLRMDADTTMSKFSYEKNFDKFKNGEYDIMVGTQMIAKGL 637 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 F +VTLV +L +D +L++ D+ E+ L TQV GR GR K+G LQT PEH +L Sbjct: 638 DFENVTLVGVLLIDKSLYAGDYLGYEKTFSLITQVVGRCGRGSKKGRAYLQTFSPEHYVL 697 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA 666 + YD F Q R+ + PP+ + + L + + Sbjct: 698 NLAADQNYDEFFRQECEIRKALLFPPYCDICEIGLSSVDEAVCKKGSDSFVKLFMKNLEG 757 Query: 667 DE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 + VLGP K G++R++I+++ + + ++ TL P KV + Sbjct: 758 HGIPIRVLGPSACSVAKVNGKYRYRIIIKCKNNKEFRSVMQATLLDAYKSPALDKVSFFA 817 Query: 726 DVD 728 D++ Sbjct: 818 DMN 820 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 71/225 (31%), Gaps = 16/225 (7%) Query: 3 VAHVALPVPL---PRTFDYLLPEGMTVKAGCRVRVPFGKQ-QERIGIVVSVSDASELPLN 58 + V + L FDY LP+G V G RV VPFGK ++R+G+V ++ Sbjct: 9 IVSVVVDKALYSFDNEFDYYLPQGAKVSIGQRVIVPFGKGGKKRVGLVTGFKQNADY--G 66 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 LK + V++ + RL+ W D D + LP + A + Sbjct: 67 RLKDIYCVINDGVILGDEALRLMHWLKDNTFCTYFDAVKTILPGGMALNVSQRYAISDEF 126 Query: 119 F-------ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA---LQAL 168 QAV L ++ + ++ + L + Sbjct: 127 RKAPDSFALEPAEQAVSAMLLGCKSDRELNDMIEYGFDEQQKKLIGRLSEKSVLVSLDII 186 Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA 213 +++ + + + L +Q + A Sbjct: 187 KQRVGSETEKNVRLTDSYLSGEYADKGGKPLTAKQKKVADFLTDA 231 >UniRef50_C7M9J5 Transcriptional regulator, TrmB n=4 Tax=Flavobacteriales RepID=C7M9J5_CAPOD Length = 817 Score = 644 bits (1661), Expect = 0.0, Method: Composition-based stats. Identities = 202/635 (31%), Positives = 334/635 (52%), Gaps = 20/635 (3%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGK-------IWRDQVATLEF 160 + + + TE+G L LKRS KQ++ + A + Sbjct: 181 KLIKYIRLSSEYQTEEGLQKALELLKRSEKQKKLIMAYFNYINREVLPLKAEKLLEEASV 240 Query: 161 NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW 220 + L+++ +KG+ + + + + + + LN Q A+ I T + Sbjct: 241 STTVLKSVIEKGIFEEYYLQKDRVSFADSDVSTKK--VLNEVQEEALHQIQKQFQTKNTV 298 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL GVT SGKTE+Y+ ++ L GKQ L ++PEIGLT I RF+ F + V HS Sbjct: 299 LLQGVTASGKTEIYIELINQYLKAGKQVLYLLPEIGLTVHLINRFKNHFGKSLSVYHSKY 358 Query: 281 NDSERLSAWLKAKNG--EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHA 337 + +ER+ W N +A +++G RS+++ PF+ LG+++IDEEHD+SY+Q E R A Sbjct: 359 STNERIEVWNNVLNNSPKAQLIVGVRSSVYLPFRQLGLVIIDEEHDNSYRQFEPAPRMQA 418 Query: 338 RDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ 397 RD A+ A+ + +LGSATP+LE++ NV+ +KY + L++R + P I ++D+K + Sbjct: 419 RDTAIMLANIFKAKTLLGSATPSLESMHNVKTEKYGFVYLSKRYADFLPPIIELIDIKDK 478 Query: 398 ----KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYT 453 ++ + LI + L QV+LF NRRG+AP + C CG + +CP CD T Sbjct: 479 HHRKRMNGHFSDVLIKEITNTLSQGRQVLLFQNRRGYAPIVQCMQCGTVPQCPHCDVSLT 538 Query: 454 LHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 HQ+ + LRCH+C P+P+ C +CGS L G GTEQ+ + L LFP + I R+D+D Sbjct: 539 FHQSSNQLRCHYCGYAIPMPKACIACGSVDLRTKGFGTEQISKELEVLFPNIAIDRMDQD 598 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 TT+ K E+ L++ + +IL+GTQM+ KG F ++ LV +++ D + S D+R+ ER Sbjct: 599 TTNGKYGYEKILSKFEQQETQILVGTQMITKGLDFENIGLVGVMNADALIHSPDYRAYER 658 Query: 574 FAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPW 633 QL QV+GRAGR+ +QG+V +QT++P++P++Q +L + + + ER+ PP+ Sbjct: 659 SFQLLLQVSGRAGRSAQQGKVFIQTYNPQYPVIQQVLQNDFRGMYQSQIEERQSFLYPPF 718 Query: 634 TSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 + + + N + N + + + VLGP + + +L+ Sbjct: 719 VQMIKITLKHSNFNQVNESAEWFANTLREVFASQRGIDVLGPEFPPISRIRNEYLKDVLV 778 Query: 694 QH-PSRVRLQHI---INGTLALINTIPDSRKVKWV 724 + PS V L+H I I + R ++ Sbjct: 779 KVHPSEVSLRHTKEHIRRIETSFQAISNFRAIRVS 813 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 73/221 (33%), Gaps = 11/221 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M V LP+PL + F Y + E ++ G RV VPFGK + IV + P Sbjct: 1 MYFVDVILPLPLSKLFTYRINEDEAHFLQMGMRVAVPFGKSKVYTAIVHHIHTVE--PSY 58 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 + K + +LD P+ T W AD+Y +G+VL ALP Sbjct: 59 DTKDIEYILDETPIITPQQIEHWQWIADFYMCTLGEVLKSALPSAFLLES------ETII 112 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 E+ L + + ++ +++L +KG ++ Sbjct: 113 EIAEKELNSTLFTDDEWQVYEALHYKTALKGSEVSKIIPKNKALKVMKSLVEKGAARISE 172 Query: 179 ETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 E + Y + A+ + + Sbjct: 173 RIFEKYVPKLIKYIRLSSEYQTEEGLQKALELLKRSEKQKK 213 >UniRef50_Q11RW4 Primosomal protein N'(Replication factor Y)(Possible helicase) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11RW4_CYTH3 Length = 815 Score = 643 bits (1658), Expect = 0.0, Method: Composition-based stats. Identities = 214/697 (30%), Positives = 332/697 (47%), Gaps = 50/697 (7%) Query: 60 LKAVVEVLDSEPV-------FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN 112 K + +++D V L + Y + + Sbjct: 139 YKDISKLIDQSSVQPIIKLLIQKQAILLFEEVKEKY-----------------SPKIISK 181 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQ------------VATLEF 160 + + T A + L + P+QQ+ L Q Sbjct: 182 IRLADQYTTPHALANLMQELDKKPRQQEVLMRYLQEVPVIQTPGANIPGIEKTFFTASGL 241 Query: 161 NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW 220 + ++LQ L K + + E +R + S + L+ +Q A +I DT + Sbjct: 242 STSSLQTLIKNKVFEAFEEVISRLSYRADEKKSV--VELSEQQEAAKESILLQLDTKDSV 299 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL GVTGSGKTE+Y+ +++ + G QAL+++PEI LT Q + R E F + V HS Sbjct: 300 LLHGVTGSGKTEIYIDLIKRSIDNGSQALLLLPEIALTTQIVQRLEEYFGDRMGVYHSKF 359 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARD 339 +D+ER+ W + G ++G RS++F PF +LG+I+IDEEH++SYKQQ+ RY+ RD Sbjct: 360 SDNERVEVWRGLQEGRYDFIVGVRSSVFLPFTHLGLIIIDEEHEASYKQQDPAPRYNGRD 419 Query: 340 LAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK- 398 A+ A +LGSATP++E+ + ++ + L R GN + D++ ++ Sbjct: 420 AALMLARIHNAKTVLGSATPSIESRDAALKNRWGYVPLLNRYGNVSLPEIRLADMRVERK 479 Query: 399 ---VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH 455 VQ G + L++ +R+ + QVI+F NRRG+AP L C DCG I C C T H Sbjct: 480 NKTVQQGFSLTLLSAIRETIANKKQVIIFQNRRGYAPMLECEDCGNIPMCTSCSVSLTYH 539 Query: 456 QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTT 515 Q H LRCH+C R VP++C SC S L VG GTE++E L L P I R+D DTT Sbjct: 540 QFSHELRCHYCGFTRKVPQKCDSCSSHRLKTVGSGTERIEDELQILLPEARIRRMDLDTT 599 Query: 516 SRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFA 575 +K + + + + ILIGTQM+ KG F +V LV + D D L+ DFR+ ER Sbjct: 600 RKKNSFAELITAFSQHEIDILIGTQMVTKGLDFANVELVGVYDADRMLYFPDFRAIERTY 659 Query: 576 QLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTS 635 Q+ QV+GRAGR +G+V++QT PEHP+ + YD F + L ER M PP+T Sbjct: 660 QMIVQVSGRAGRKSGEGKVIIQTAQPEHPVFAFIKNNDYDGFFTRELYEREMYHYPPFTR 719 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQH 695 + + + A L + + + +LGP A K + ++ ++ Sbjct: 720 VTHISVLHLDKKEALKTAHGLTAKLKDAIGSK---RILGPQVASIEKLRNYYHIELFIKL 776 Query: 696 -PSRVRLQHIINGTLALIN---TIPDSRKVKWVLDVD 728 LQ I N +++ T+ K + ++D D Sbjct: 777 EKDIKGLQSIKNKIASIVQNEHTLHIGSKGRIIIDTD 813 Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 9/178 (5%) Query: 7 ALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVV 64 LP+PLP+ F Y +P+ + TV AGCR+ VPFG+++ G+V S+ + + K ++ Sbjct: 2 VLPLPLPQLFTYKIPDQLVDTVSAGCRIIVPFGQRKFVTGVVRSIHQHAP-ASYQTKELI 60 Query: 65 EVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQG 124 +VLD P ++ + W A+YY G+VL ALP + + + Sbjct: 61 DVLDVTPTMNAYQFKFMDWMAEYYLCAPGEVLQAALPSGFKLSSESMIQLNPLFQ----E 116 Query: 125 QAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 +VDL +R Q+ L + ++ ++ L +K L E E Sbjct: 117 ASVDLTEKERRIIQE--LRSNTLSYKDISKLIDQSSVQPIIKLLIQKQAILLFEEVKE 172 >UniRef50_P05445 Primosomal protein N' n=2 Tax=Rhodospirillum rubrum RepID=PRIA_RHORU Length = 811 Score = 641 bits (1654), Expect = 0.0, Method: Composition-based stats. Identities = 267/798 (33%), Positives = 374/798 (46%), Gaps = 81/798 (10%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 PV V LP+PL +DY +P GM G VRVP G+++E IG+V E P L Sbjct: 23 PVVAVLLPLPLAGAYDYKVPAGMARPAVGTLVRVPLGRREE-IGVVWGAGAG-ETPPERL 80 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQ-------GRPAANA 113 K ++ P + + W A Y P G VL AL + G +A Sbjct: 81 KPLIG-FPECPPLPAPLRAFIDWVAAYTVQPPGAVLRMALSVPAALEAPPPALGWRRPSA 139 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQAL----AALRQGKIWRDQVATLEFNDAALQALR 169 +GQ + SP +Q+ L D A + A+ Sbjct: 140 GQRAAGQRAEGQGPLPGGARLSPGRQRVLAVLDDHPGLPFAGADLAREAAVGPAVVAAMA 199 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT-FSAWLLAGVTGS 228 K GL + + + E+S + G L+ +Q A + +A D FS LL GVTGS Sbjct: 200 KAGLLEAVTRSNEWSPQAPDADRPGPL--LSADQQAAADGLRTALDQGFSGLLLEGVTGS 257 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY + L +G+QALV++PEI L Q RF +RF A HS + + R A Sbjct: 258 GKTEVYFEAIAETLRRGRQALVLLPEIALAAQWPRRFADRFGAAPVQWHSQMGAAARRRA 317 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 W G A +V+G RSALF P+ +LG+I++DEEHDS++KQ+EG Y+ARD+AV RA Sbjct: 318 WRAVALGRAPVVVGARSALFLPYPDLGLIIVDEEHDSAFKQEEGVPYNARDMAVVRARLG 377 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRR-----------------AGNARPAIQHV 391 P +L SATP+LET+ N +Q +YR L L RR Sbjct: 378 GFPAVLASATPSLETIENARQGRYRHLVLPRRHGGAEMPEITLLDLRRAPPQKWLPTDFA 437 Query: 392 LD--------------------------------------LKGQKVQAGLAPALITRMRQ 413 + L+P LIT + + Sbjct: 438 GPGGSEGLAAPGGANDEAEEQKAPPPSPTASPSPTASPSPMARPARLGWLSPPLITAVEE 497 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L A QV+LFLNRRG+AP LC CG +CPRC + H+ LRCHHC Q+P+P Sbjct: 498 TLAAGEQVLLFLNRRGYAPLTLCRSCGHRLKCPRCTAWLVEHRRDGRLRCHHCGYQQPIP 557 Query: 474 RQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 CP+CG + L P G G E+L + A FP + DT + + Sbjct: 558 ETCPACGVADSLAPCGPGVERLAEEAAHRFPKARMDVAASDTVTGPKEAAALATRIANHD 617 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 ++IGTQ++AKGHHFP +TLV ++D D L D R++ER QL QVAGRAGRA + G Sbjct: 618 IDLIIGTQIMAKGHHFPLITLVGVVDGDLGLTGGDLRASERTHQLLHQVAGRAGRAERPG 677 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 V++QT P HP+++ L F E AER+ + +PP+ V + ++ Sbjct: 678 RVLIQTVDPGHPVMEALASGDPALFLEVEAAERQALAMPPFGRLVALVISGEDSARV--- 734 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 Q + + + L VLGPVPA GR R ++LL+ V++Q ++ L+L+ Sbjct: 735 -QAVAAALGRAAPMGPGLDVLGPVPAPLAMLRGRHRHRLLLKAARGVKVQPVVRHWLSLV 793 Query: 713 NTIPDSRKVKWVLDVDPI 730 + P VK +DVDPI Sbjct: 794 SIPP---GVKVQVDVDPI 808 >UniRef50_C2KVD6 Possible DNA replication factor Y n=1 Tax=Oribacterium sinus F0268 RepID=C2KVD6_9FIRM Length = 660 Score = 641 bits (1653), Expect = 0.0, Method: Composition-based stats. Identities = 198/731 (27%), Positives = 335/731 (45%), Gaps = 81/731 (11%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A V + + + + F Y +P +++ G V +PFG+ +++ G V+ + + ++ P + Sbjct: 2 FAKVIVDISHESIDKCFTYRVPTEISLSVGDPVLIPFGRGKKK-GYVIGIEELADFPEEK 60 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 +K + L+ E + L +W A+ Y + L LP+ + + Y Sbjct: 61 IKDIFSPLEKEFSVEKQLLDLAIWMAEEYGTTLNQCLKTVLPVKKKTKNRTKPGKIQY-- 118 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 + K + +Q++ L A+++ E Sbjct: 119 ------GNPYPAPKLNAEQEEVLFAMQEYFQ--------------------------EEE 146 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 P + + E + I GK +Y Sbjct: 147 APSALLFGVTGSGKTELY---------LRLIEDCLAK------------GKEVIY----- 180 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 ++PEI L+ Q+ R RF V +LHS ++ ER + K ++GE + Sbjct: 181 -----------LIPEISLSHQSRMRVEGRFPGQVAILHSKMSQGERAESMEKCRSGEVKL 229 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 ++G RSALF PF NLG+I+IDEE + SYK + RY +RD+A R + P++ GSATP Sbjct: 230 LLGPRSALFAPFSNLGLIIIDEEQERSYKSETAPRYESRDVARKRGELAKCPVLFGSATP 289 Query: 360 ALETLCNVQQKKYRLLRLTRRAG-NARPAIQHVLDLKGQKVQAG---LAPALITRMRQHL 415 ++ ++ K RL L RA + ++DL+ + + + AL + + L Sbjct: 290 SVNIFREAEEGKVRLFTLKNRAVEGSFLPKLTLIDLRKELEEGNRSIFSKALEEAVLKRL 349 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q ILF+NRRG++P + C CG CP CD TLH+ L+CH+C R + + Sbjct: 350 ERGEQTILFMNRRGYSPFVSCRKCGKSLNCPHCDVSLTLHK-NGMLQCHYCGYSRKLEKN 408 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP+CGS+++ P G GTE+LE+ +FP I R+D DTT +KG E+ L + + A I Sbjct: 409 CPNCGSSYISPFGTGTEKLEKICHAVFPKARILRMDGDTTGKKGKYEEILQDFAQEKADI 468 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 L+GTQM+ KGH FP VTLV ++ + F +DF++ E Q+ TQ AGRAGR GEV+ Sbjct: 469 LLGTQMIVKGHDFPKVTLVGIMAAEQLFFQSDFQAREYAFQILTQAAGRAGRGKLPGEVL 528 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +Q++ PE +L+ + + Y AF + R+ ++ PP+ + ++ + L L++ Sbjct: 529 IQSYRPEEEVLELAMEQDYFAFYQSEKKFRQRLEYPPFARMLAIQCSYQEEEFLSLMLEK 588 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 I E+ + GP PA K +R I ++ S + + N + + Sbjct: 589 TIKRIRGKL-EKEQAELFGPFPATIYKLKDNFRKIIYIKQESHDIIIRLRNLFVEELRKE 647 Query: 716 PDSRKVKWVLD 726 ++ D Sbjct: 648 DKRSLIQLQFD 658 >UniRef50_Q2RYZ4 Primosomal protein N' n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2RYZ4_SALRD Length = 825 Score = 640 bits (1650), Expect = 0.0, Method: Composition-based stats. Identities = 238/671 (35%), Positives = 328/671 (48%), Gaps = 26/671 (3%) Query: 78 WRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPK 137 L+ A + L + + A + + +R+ Sbjct: 156 LALIRRMAADDVVAVETTLSDERVAPKTETHLRFAPAFQHKDAPDDLIEQLRGNKQRAVV 215 Query: 138 QQQALAAL--RQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGE 195 + A D + + + + +++L +KG+ +L + S A Sbjct: 216 RALAGFRAEGTPEPRRTDVMERADASYSTVRSLVEKGMLELVEKEVMRSPLDDLPAPDPP 275 Query: 196 RLRLNT-EQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 Q A+ A+ A D + +LL G+TGSGKTEVY+ L+ V A+G+ +++V Sbjct: 276 PDHDLLPAQQDALDAVTDAVDAHRYGTFLLHGITGSGKTEVYIRALQAVRARGRTGIILV 335 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LTPQT+ RFR F + VLHS +N ER AW + + GEAAI IG RSA+ P + Sbjct: 336 PEIALTPQTVQRFRAHFGDEIAVLHSQMNMGERYDAWRRLRTGEAAIAIGPRSAVLAPLE 395 Query: 313 NLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKK 371 +LG+IV+DEEH++SYKQ + RYHARD+AV RAH ILGSATP+LE+ N + K Sbjct: 396 DLGLIVVDEEHEASYKQFDPAPRYHARDVAVMRAHRADAVCILGSATPSLESTMNARWGK 455 Query: 372 YRLLRLTRRAGNAR-----PAIQHVLDL----KGQKVQAGLAPALITRMRQHLQADNQVI 422 Y L L R +A VLDL K ++ LA L +R + Q I Sbjct: 456 YERLELPERVPDASGKTAALPDVRVLDLALQRKKHQLDGALADPLREAIRTRVDRGEQTI 515 Query: 423 LFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQH--HLRCHHCDSQRPVPRQCPSCG 480 L NRRG+AP L C DCGW EC C TLH+ LRCH+C VPRQCP CG Sbjct: 516 LLQNRRGYAPVLECEDCGWAPECQSCSVSLTLHRHDGGEQLRCHYCGYAARVPRQCPECG 575 Query: 481 STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 + +G GT+++E L + P I R+DRDTT K L G A IL+GTQ Sbjct: 576 GRDIHQIGTGTQRVEAELEEVVPDATILRMDRDTTREKHGHHDLLRRFENG-ADILLGTQ 634 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGK-QGEVVLQTH 599 M+AKG F VTLV ++D D L DFR+ ER QL TQVAGRAGR + GEV+LQT Sbjct: 635 MIAKGLDFSRVTLVGVVDADVGLLFPDFRAEERTFQLLTQVAGRAGRTRELAGEVILQTR 694 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 +P+H L+ Y+ FAE+ALAERR + PP+ V + + Sbjct: 695 NPDHMALRYAQEHDYEGFAEEALAERRELGYPPFGHVATVEFRGPDEDRVERLAENWTEQ 754 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHP--SRVRLQHIINGTLALINTIPD 717 + V+GP PA + + R++ LL+ S LQ + T P+ Sbjct: 755 LRQHAGPAG---VMGPEPAFIQRVKKQHRYRTLLKVRGGSPGPLQTALRRTRDAHGAPPN 811 Query: 718 SRKVKWVLDVD 728 V +DVD Sbjct: 812 GYHV--AVDVD 820 Score = 116 bits (292), Expect = 3e-24, Method: Composition-based stats. Identities = 56/244 (22%), Positives = 86/244 (35%), Gaps = 18/244 (7%) Query: 4 AHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +V LP+PL + + Y +PE + +AG RV VPF + + GI+V A+E ++K Sbjct: 3 VNVVLPLPLDQAYTYRVPEALVGAAQAGARVLVPF-RNRRLTGIIVGEGPAAETLDFDVK 61 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY---W 118 AV++VLD PV T + L W ADYY P G+ L LP Sbjct: 62 AVLDVLDDVPVCTEGLLDLTKWIADYYVCPWGEALKAVLPAGTTVETEHRLTRTDAAPDA 121 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 +A + L L + A R G + D + +A Sbjct: 122 WADHEVGRTVLEDLAAHGETTLAAVRKRVGPAVPLALIRRMAADDVVAVETTLSDERVAP 181 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSG-----KTEV 233 +T + + L + + LAG G +T+V Sbjct: 182 KTETHLRFAPAFQHKDAPDDL-------IEQLRGNKQRAVVRALAGFRAEGTPEPRRTDV 234 Query: 234 YLSV 237 Sbjct: 235 MERA 238 >UniRef50_C8X3K7 Primosomal protein N' n=2 Tax=Desulfovibrionales RepID=C8X3K7_DESRD Length = 778 Score = 639 bits (1648), Expect = 0.0, Method: Composition-based stats. Identities = 239/776 (30%), Positives = 369/776 (47%), Gaps = 56/776 (7%) Query: 5 HVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 VAL T Y LPEG + G RV VP G + R G+++ + +S L ++LK Sbjct: 6 DVALLGAPFTTLTYTLPEGFPHSLWQPGLRVWVPVG-RALRPGVLLRPASSS-LDPDKLK 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + L+ P+ + ++ A G +L ALP LR + A A Sbjct: 64 PLFWPLERAPLLSRDYLEMIEEMAKRVVQDSGAILAAALPAGLRSAKGALVAAGNKRERL 123 Query: 122 EQGQAVDLNSLKRSPKQQQA-----------------LAALRQGKIWRDQVATLEFNDAA 164 L+ +R + L + + A Sbjct: 124 SLDALRRLSETERKRWAELWSEGQAEWVLHDSEHRDSLQCFVKQDPPWQVRPQAKRQIAV 183 Query: 165 LQALRKKGLC-------------------------DLASETPEFSDWRTNYAVSGERLRL 199 L L KG + E + A E L L Sbjct: 184 LDYLWDKGSVNRGRLRHELGNWAGPVLDTLCDKALVEVAAPEECEPDSCSVASGLEDLVL 243 Query: 200 NTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTP 259 + EQ+ A+ + AA A L+ GVTGSGKT VY + LA G+ L++VPE+ L Sbjct: 244 SAEQSRALEGLRHAATQHQAALVHGVTGSGKTVVYAHLAREWLAGGRSVLLLVPEVALAR 303 Query: 260 QTIARFRERFN-APVEVLHSGLNDSERLSAWLKAK-NGEAAIVIGTRSALFTPFKNLGVI 317 QT+A R V + H + +R + + E +V+GTRSALF P ++ G++ Sbjct: 304 QTLAAVRHFLPGERVYLYHGYQSPKQREKVFTELAGRDEPCVVVGTRSALFLPLRDTGLV 363 Query: 318 VIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRL 377 V+DEEH S+KQ E Y A++LA +R Q ++LGSATP L+T ++++ + L Sbjct: 364 VLDEEHAESFKQDERLVYQAKELAFFRVRQSQGFLVLGSATPDLKTFSAAREERLPKVTL 423 Query: 378 TRRAGNARPAIQHVLDLKGQK-VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 R G ++ ++DL+ + V A ++ R+++ L+ Q I+ NRRG+AP + C Sbjct: 424 QERVGASQLPEIDLVDLREEPPVAGPFAASVHQRLQEVLERGEQAIIMHNRRGYAPLVYC 483 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 CG +A CP C+ T H+ + L CH+C + P CP C ++ VP+G GTE +E+ Sbjct: 484 TGCGEVARCPDCEVGLTYHKRRQRLVCHYCGQHKEFPFVCPKCRASQFVPIGEGTELIEE 543 Query: 497 TLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVA 555 L+ P GV + R+DRD+T R+G LE+ LA RG +++L+GTQML+KGHHFP VTL Sbjct: 544 YLSTSLPAGVRVDRLDRDSTRRQGRLEEILAAFSRGESQVLVGTQMLSKGHHFPGVTLAV 603 Query: 556 LLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYD 615 ++D D L D+R+AER Q+ QVAGRAGR K G V++QT PEH + + Y+ Sbjct: 604 VVDGDLGLNLPDYRAAERTFQMLVQVAGRAGRGDKPGHVLIQTRDPEHYCWEFVRRGDYE 663 Query: 616 AFAEQALAERRMMQLPPWTSHVIVRAEDHNN-QHAPLFLQQLRNLILSSPLADEKLWVLG 674 F E+ A R+ + PP+T +VR + ++++ + + A L VLG Sbjct: 664 GFFEREAALRQRLSYPPYTKLALVRFSLPTEWEQGAETIREVGRFLRQAGKA-AGLRVLG 722 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 P PA + GR R+ LL+ S ++ + + R+++ LD+DP+ Sbjct: 723 PAPAPLGQLRGRLRYHCLLKGESWQEMRTVYQQVRHRFFRV---RQLRIQLDLDPV 775 >UniRef50_A5CXS0 Primosomal protein N' n=3 Tax=Gammaproteobacteria RepID=A5CXS0_VESOH Length = 680 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 251/730 (34%), Positives = 377/730 (51%), Gaps = 66/730 (9%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 + VA+ +PL +TF+YL V G RV+VP +++ V+ + Sbjct: 16 IIEVAISIPLSKTFNYLCDNE--VSVGVRVKVPLARKK-----VIGIV------------ 56 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 L + Y+ + E Sbjct: 57 -----------------LAIKDKSRYNET------------------------NFRKKRE 75 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC-DLASETP 181 L S+++ + L ++ + K L ++ Sbjct: 76 DTLGYKLKSVEKVLDKIPILDKSILDLLFWSANYYHYPISKVISYTLPKNLLLGKEAKIK 135 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + D+ + EQ A+ I + + + A+LL GVTGSGKTEVYL +++++ Sbjct: 136 KIIDFPNKL--QQPDFQPTDEQNIAIEQILKSTNQYHAFLLHGVTGSGKTEVYLHIIQSM 193 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 + Q KQ LV+VPEIGLTPQ I F+ R V +HS LN++++L A+L AKNG+A +++ Sbjct: 194 IDQKKQVLVLVPEIGLTPQMITHFKSRLKTRVIAIHSQLNETQKLDAYLMAKNGDAGVIL 253 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 GTRSA+F P N G+I+IDEEHD+S+KQQ +RY AR+L RA IP++LG+ATP+L Sbjct: 254 GTRSAIFAPISNFGLIIIDEEHDNSFKQQSSFRYSARNLGFIRAQQSNIPLVLGTATPSL 313 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQV 421 E L KK + LT+RAG A ++D++ L+ LI +++Q+L D QV Sbjct: 314 ELLKIAMDKKITRITLTKRAGGATLPKVSLIDMRS-NTNDALSKILIEKIKQYLSIDKQV 372 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 +LF+NRRG+AP C C W A+C CD H+ + L+CHHC ++ CP+C Sbjct: 373 MLFINRRGYAPIYYCTQCNWKAQCNHCDSTMVYHRHINRLKCHHCGDEKIPEHVCPNCTK 432 Query: 482 THLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQM 541 L +G GTE+LE+TL F PI RIDRDTT RK + Q L +++ G I+IGTQM Sbjct: 433 QSLKILGYGTEKLEETLYSYFVDTPIIRIDRDTTRRKKSFAQHLEQINTGKPCIIIGTQM 492 Query: 542 LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHP 601 L KGH F ++ +V +LDVD S +FR+ E AQL QV+GRAGR ++GEVV+QT +P Sbjct: 493 LTKGHDFSNLAMVGILDVDTGFLSTNFRATEYLAQLLIQVSGRAGRHKERGEVVIQTRYP 552 Query: 602 EHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLIL 661 +HP+ +L Y FA Q L +R +PP++ ++ A N Q+A FL + L+ Sbjct: 553 DHPIFNFVLSSRYTQFASQLLKQRLSAMMPPFSHQALLCANAKNKQNAENFLHEAAILLK 612 Query: 662 SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKV 721 S + + + GP+ K+ + + + LQ +RV L I++ IN + KV Sbjct: 613 SIQMN--SVEIWGPIANTIEKKSDYYYFNLYLQSNNRVTLHQILSTFSQHINKLKLKNKV 670 Query: 722 KWVLDVDPIE 731 +W LD+DPIE Sbjct: 671 RWYLDIDPIE 680 >UniRef50_C0BGJ9 Primosomal protein N' n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BGJ9_9BACT Length = 825 Score = 638 bits (1646), Expect = 0.0, Method: Composition-based stats. Identities = 208/641 (32%), Positives = 325/641 (50%), Gaps = 22/641 (3%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF----- 160 + + + + +E+ +SL+++PKQ L A+ ++ + Sbjct: 189 KPKRVRYVSLAKHYHSEESLKALFDSLQKAPKQLAVLMAIFTDSTGHKELKKVSILKSKS 248 Query: 161 --NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 + ++ L KG+ + + + V G + L+ Q ++ I D Sbjct: 249 GSGSSQIKTLIDKGVLEEQYQDEHRLLIKQQQDVLGNK-TLSDAQQLSLDEIKKQFDNKK 307 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 L GVT SGKTEVY+ ++E LA G Q L ++PEI LT Q + R RF V V HS Sbjct: 308 VVLFEGVTSSGKTEVYIKLIEEQLAHGNQVLYLLPEISLTSQIVNRLAARFGDQVTVYHS 367 Query: 279 GLNDSERLSAWLKA--KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRY 335 + ER W K + EA +++G RSA+ PF+NLG+++IDEEH++SYKQ + RY Sbjct: 368 KFSIHERAEVWQKVLTASPEARVIVGARSAVLLPFENLGLVLIDEEHENSYKQFDPAPRY 427 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL- 394 ARD A+Y A+ Q ++LGSATP+LE+ NV+ KY +RLT R G ++DL Sbjct: 428 QARDSAIYLANLMQSRVLLGSATPSLESAENVRTGKYGWVRLTERYGGVSLPKIELIDLK 487 Query: 395 ---KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + + ++ + LI ++ L QVILF NRRG+AP C CG +C +CD Sbjct: 488 EANRKKMMKGMFSSQLIDAIQHTLSQGKQVILFQNRRGYAPISECTSCGHSPQCTQCDVS 547 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 T HQ Q LRCH+C P+P QC +CG L G GT+Q+E+ + FP V + R+D Sbjct: 548 LTYHQTQQQLRCHYCGYNIPMPNQCHACGMLTLTTKGAGTQQIEEQIKAFFPEVAVGRMD 607 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 D+T K + + + + +IL+GTQM+ KG F +V LV +++ D L DFR+ Sbjct: 608 WDSTRGKWSFDAIIESFVQERIQILVGTQMVVKGLDFKNVLLVGVINADHVLNFPDFRAH 667 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER Q+ QVAGRAGR+ ++G V++QT+ PEHP+L+ +L Y+ + ER + P Sbjct: 668 ERSYQMLCQVAGRAGRSDRKGNVLIQTYQPEHPILRQVLDHDYEGLYQTQKKERHEYKYP 727 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 P+ + + + L + N++ S VLGPV + ++ Q+ Sbjct: 728 PYYRMIRITFKSRQYDTVNLASEWFTNVLRQSYEG----TVLGPVFPSVARIRNQYHKQL 783 Query: 692 LLQHPSR---VRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +++ ++ + TL I R + DVDP Sbjct: 784 VVKIDHNFTPQVIKKTLERTLQSFQAIAAFRSTRVNFDVDP 824 Score = 111 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 11/226 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+ LP+ + Y + ++ G RV VPFGKQ+ +V + + E Sbjct: 12 YIDVLLPLALPKPYTYKITAEQLESLAVGFRVAVPFGKQKIYTALVTKIHQVAPQ-TYEP 70 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K++ +LD P+ T S + W A YY G+++ LP L Sbjct: 71 KSIAMILDEVPIVTDSQLKFWEWMASYYMCSQGEIMRACLPAALLLESKTVLVKCEASEV 130 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + + + + ++Q + R QV L ++ + + Sbjct: 131 QLKALSDMQYLVYEALQKQTLTLDEISKIVDRKQVMPLVLGMLDMKVAMIHQHLEEKYKP 190 Query: 181 PEFS--------DWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS 218 + + L+ +Q + AI + + Sbjct: 191 KRVRYVSLAKHYHSEESLKALFDSLQKAPKQLAVLMAIFTDSTGHK 236 >UniRef50_B3ERS5 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ERS5_AMOA5 Length = 832 Score = 637 bits (1644), Expect = 0.0, Method: Composition-based stats. Identities = 224/664 (33%), Positives = 332/664 (50%), Gaps = 27/664 (4%) Query: 89 HHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAAL--- 145 H +L L + A + L++ PKQ L Sbjct: 174 IHKEIIILVEELQEKYAPKKEKQIALNKNFVDNTAELQALFEKLEKKPKQLDVLLQYMAL 233 Query: 146 ---------RQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGER 196 + I + Q+ + + AALQ L ++ + L + S AV+ Sbjct: 234 VSTNLPEQTQSYFIAKKQLLEKDVSSAALQKLIQQDI--LIEKAVIISRLAQLKAVATPH 291 Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 L+ Q A+ +I + T + LL G+TGSGKTE+Y+ ++++VL Q Q L ++PEIG Sbjct: 292 TTLSPAQTQALLSIENHFKTKNTALLHGITGSGKTEIYVRLIQSVLEQDGQVLYLLPEIG 351 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 L Q + R + F + V HS +ER+ W +VIG RSALF PF L + Sbjct: 352 LATQIVQRLNKIFGNKMGVYHSKYASNERVEIWNNVLQNNVQLVIGARSALFLPFDRLQL 411 Query: 317 IVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLL 375 I++DEEH+++YKQ + RYHARD A+ A Q ++LGSATPA+ET N QQ KY L+ Sbjct: 412 IIVDEEHETAYKQLDAIPRYHARDAALMLATFHQAKVLLGSATPAIETYYNAQQGKYGLV 471 Query: 376 RLTRRAGNARPAIQHVLDLKGQKVQAG----LAPALITRMRQHLQADNQVILFLNRRGFA 431 +LT R +++L+ ++ + G L+ ++ LQ Q I+F NRRG+A Sbjct: 472 KLTERFNQTPLPRIELVNLRTEQQRKGIQGEFTSILLQKLESILQQQEQAIIFQNRRGYA 531 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 LLC C + C +C T HQ + L CH+C VP CP C + L VG GT Sbjct: 532 SYLLCQTCAEVPTCQQCSVSLTYHQFRDALVCHYCGFHCKVPPLCPVCDAPTLKNVGFGT 591 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 E++E+TL FP + R+D DTT RK + EQ + + G IL+GTQM+ KG F V Sbjct: 592 EKIEETLQHFFPNKRVQRMDLDTTRRKHSYEQIIDNLESGQTDILVGTQMITKGLDFGQV 651 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 +LV +LDVD L+ DFR+ ER QL TQV+GRAGR GKQG+V++QT +P+ P+LQ ++ Sbjct: 652 SLVGVLDVDRLLYFPDFRANERCFQLITQVSGRAGRRGKQGQVLIQTTNPQLPILQDIIN 711 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW 671 Y+ Q L ER+ + PP+ + + + N + Q L + D Sbjct: 712 YDYEQMYTQELGERQKFRYPPYIRLIKITCQHTNERLVKECAQVLAGYLCKLVSEDN--- 768 Query: 672 VLGPVPALAPKRGGRWR---WQILLQHPSRVRL--QHIINGTLALINTIPDSRKVKWVLD 726 +LGP L K ++R W L + V L + I + + R+++ + D Sbjct: 769 ILGPQAPLVAKVRNQYRIDTWVKLAKSSEPVLLAIKQQIQQATKSLTSEKQFRQIRIIFD 828 Query: 727 VDPI 730 VDPI Sbjct: 829 VDPI 832 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 10/225 (4%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 A + LP+P+ + Y +P + VK G RV V GK++ GIV + + P + Sbjct: 12 YFAELILPLPIAKLLTYGIPLNLVDIVKQGSRVIVSLGKKKILTGIVNKIHQRA--PNHP 69 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 K +++VLD EP+ L W A YY +GDV+ ALP + + + Sbjct: 70 AKNIIDVLDEEPIVNTYQLALFHWIAQYYMCSVGDVVKAALPSGFKLSSQSKIYLHPAFE 129 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 + + + K + L+ + +Q+ + L+ L K + L E Sbjct: 130 EDSIPLLENEQLIVATLKNGKPLSYQQ-----IEQLIGQKEAYKQLKKLIHKEIIILVEE 184 Query: 180 TPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLA 223 E ++ + + NT + A+ LL Sbjct: 185 LQEKYAPKKEKQIALNKNFVDNTAELQALFEKLEKKPKQLDVLLQ 229 >UniRef50_D0LZQ3 Primosomal protein N' n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZQ3_HALO1 Length = 858 Score = 636 bits (1640), Expect = e-180, Method: Composition-based stats. Identities = 228/638 (35%), Positives = 315/638 (49%), Gaps = 12/638 (1%) Query: 105 RQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA 164 + R + + L + AL + Sbjct: 222 ARVRTRTERTAVLSRPPSDDERIALIRAPKRAAALSALERAGGAAAVSALREHEPNIASH 281 Query: 165 LQALRKKGLCDLASETPEFSDWRTN--YAVSGERLRLNTEQATAVGAIHSAADT--FSAW 220 L+AL GL E S + + + S L Q A+GAI F+A+ Sbjct: 282 LRALAGLGLVHFEQRAAEGSSYAPDDGLSASAAPPALTDAQRAALGAISGGLAGADFAAY 341 Query: 221 LLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGL 280 LL G+TGSGKTEVYL + L G+ A+V+VPEI LTPQ ARFR RF V VLHSGL Sbjct: 342 LLHGITGSGKTEVYLHAIAEALDSGRTAIVLVPEISLTPQLAARFRARFGDLVAVLHSGL 401 Query: 281 NDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDL 340 D ER W + ++G A I +G RSA+F P + +IV+DEEHDSS+KQ+EG RY+ARD+ Sbjct: 402 TDRERFDEWQRLRSGSARIALGARSAVFAPVERPAIIVVDEEHDSSFKQEEGVRYNARDV 461 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK--GQK 398 A+ RA +LGSATP+ E+ ++ +Y+LL L R +DL+ + Sbjct: 462 ALVRAQRVGGVCVLGSATPSTESYWAAERGRYQLLTLPERPTPRPLPTVERIDLRVYKAE 521 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + L L + + L QVILFLNRRGF +LC CG C +C T H+A+ Sbjct: 522 SEDMLTAPLRQAIAETLARGEQVILFLNRRGFDTFVLCRACGEALRCQQCSVSLTYHRAR 581 Query: 459 HHLRCHHCDSQRPVPRQCPSCGST-HLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 + L CH+C QR VP QCPSC + ++ GLGTE++ +A F ++R+DRD + Sbjct: 582 NMLLCHYCGYQRRVPEQCPSCRAPGTILRKGLGTEKVADAVAERFAPARVARLDRDVATG 641 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 E L V R IL+GTQM+ KGH FP VTLV +L D L DFR++ER QL Sbjct: 642 ARIGE-ILGRVARREVDILVGTQMVTKGHDFPGVTLVGVLCADTGLSLPDFRASERTFQL 700 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 TQVAGRAGR + G V++Q+ PE + T Y AF R PP+ V Sbjct: 701 LTQVAGRAGRGERPGRVLIQSFRPEAVAIATAAQHDYAAFYRAEREAREEFGYPPFGHFV 760 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 +R + + + L + S L D + VLGP A + GR RW + L + Sbjct: 761 ALRLDGTDALAVERTAELLIQRVRGSGL-DAGITVLGPTEAPLARIKGRTRWHLWLLAEA 819 Query: 698 RVRLQHIINGTL---ALINTIPDSRKVKWVLDVDPIEG 732 R L+ +I+ L + +V+ +DVDP+ Sbjct: 820 RPPLRRLIHAVLYGDIAGASAQLPAEVRVSVDVDPVSA 857 Score = 93.4 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 5/137 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDAS--ELPL 57 A +A+ P+ +F Y +PE + + G RV VPFG + G+V+S+++A E+ Sbjct: 31 RYAELAVQAPVRGSFCYEVPERLRGRLVRGSRVLVPFGGR-GLTGVVLSLAEAPPAEVDP 89 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 ++A+ +L E + L LWAA YY P G+VL ALP+ + Sbjct: 90 ARVRAIDGLLADEEPVPVELLELCLWAAAYYEAPPGEVLRAALPVGAQVSAQQVVELTET 149 Query: 118 WFATEQGQAVDLNSLKR 134 G+ L++ +R Sbjct: 150 GERALAGEGGALSARQR 166 >UniRef50_Q6MGZ0 Similar to primosomal replication factor Y n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MGZ0_BDEBA Length = 681 Score = 633 bits (1634), Expect = e-180, Method: Composition-based stats. Identities = 218/579 (37%), Positives = 290/579 (50%), Gaps = 26/579 (4%) Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEV 233 + + L L EQ T +I + +FS LL GVTGSGKTEV Sbjct: 104 RKTEKQRASKRPPVIPQLEADSALNLTDEQQTCFESI-AKFSSFSTHLLFGVTGSGKTEV 162 Query: 234 YLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAK 293 YL +L+ VL++GK+ +V+VPEI LTPQ I RF RF + LHS L D ER + W Sbjct: 163 YLRLLDKVLSEGKRGIVLVPEISLTPQLIQRFARRFGDKIAALHSQLTDRERTNQWWDIV 222 Query: 294 NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPII 353 G +I+IG RSALF P NLG+I++DEEH+ S+KQ E +Y+ RD AV P++ Sbjct: 223 EGRKSILIGARSALFCPIDNLGLIIVDEEHEPSFKQDEKLKYNGRDAAVMLGKQMNCPVV 282 Query: 354 LGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQA------------ 401 LGSATP+LET N + KY L RLTRR N V+DL+ K Sbjct: 283 LGSATPSLETWKNAVEGKYHLHRLTRRVANRALPDIEVIDLRKLKSDDEEKQKAITKYSH 342 Query: 402 ---GLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 L+P L RM Q L +Q LFLNRRG A ++C CG ECP CD TLH A Sbjct: 343 LPFWLSPDLYERMHQVLDRGDQAALFLNRRGIAQMVVCPACGHTRECPNCDISLTLH-AH 401 Query: 459 HHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRK 518 HL CH+CD +CP C L +GLGTE LE L LFPG I+R DRD + Sbjct: 402 SHLICHYCDYHENFKTKCPDCKEGQLEAIGLGTELLETDLTRLFPGKKIARADRDEIQSR 461 Query: 519 GALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLY 578 LE +A + G IL+GTQM+AKG FP + LV L+ D DFR+ ER QL Sbjct: 462 ADLEDLIANMESGDIDILVGTQMIAKGLDFPKLKLVGLVLADVGFNLPDFRATERSFQLI 521 Query: 579 TQVAGRAGR----AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 TQ++GR+GR G V++QT + EH + ++ FA L R + PP Sbjct: 522 TQMSGRSGRHVKDGESPGLVIIQTFNTEHDSITFAKNHDFEGFATHELEIRSALNYPPMG 581 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRN---LILSSPLADEKLWVLGPVPALAPKRGGRWRWQI 691 V R + + L + + + VLGP A K G++R+ + Sbjct: 582 RLVSFRIQGTKLGQVEETARLLARRAQALKTQFPQYGSIEVLGPAEAPLSKLRGQFRYHL 641 Query: 692 LLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L++ L + +P VK ++D+DP+ Sbjct: 642 LIKTTQPAAANPFSRQLLGDQDWVP--SGVKILIDIDPM 678 Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 5/132 (3%) Query: 5 HVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQ-QERIGIVVSVSDASELPLNELKAV 63 VA PLP Y + ++ G V VP G+ ++ G+++ E+P E+KAV Sbjct: 8 KVAADAPLPEALTYS--SDLPLQRGQLVTVPLGRGGRKVHGLILG--PTQEVPDFEVKAV 63 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQ 123 +++ + L W A YY HP+G V+ A P L + + A+ E Sbjct: 64 DSIVEEYAPLPEPYVKWLEWLAQYYLHPVGQVVQSAFPPLRKTEKQRASKRPPVIPQLEA 123 Query: 124 GQAVDLNSLKRS 135 A++L +++ Sbjct: 124 DSALNLTDEQQT 135 >UniRef50_C6BTT2 Primosomal protein N' n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTT2_DESAD Length = 780 Score = 633 bits (1632), Expect = e-179, Method: Composition-based stats. Identities = 212/777 (27%), Positives = 355/777 (45%), Gaps = 58/777 (7%) Query: 7 ALPVPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVE 65 L P + Y P + + G RV VP G + R+ ++ + ELK+++ Sbjct: 8 CLASPPYSIYTYEAPADLPKLMEGQRVLVPLG-RSVRVAFLIETVETPP-EGVELKSIIW 65 Query: 66 VLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ 125 L+ +P+ + ++L P+G VL + +P R + + A + Sbjct: 66 PLERDPLLNSNHFKLYRNIGARQMQPLGKVLENVVPKRFRSAKVSFKVADRALPARLKAL 125 Query: 126 AVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF------------------------- 160 + ++ + + R + E+ Sbjct: 126 DIGRMPAEKRMELVKIYDEGRMNVSLPAAIEKEEYVSLTSDPPWPVRPNAARQLQILEFI 185 Query: 161 ------------------NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNT- 201 ++ L L + E + A +G + Sbjct: 186 FENGPREKGFLKNIMGDWTTGVIKKLHSDSLVKIGPPPEEERNPAEKCAATGPKWDFTPS 245 Query: 202 -EQATAVGAIHSAADTFS--AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 +Q A+ + +A D LL G+TGSGKT VY++ L QGK +V+VPEI L Sbjct: 246 EQQQGAIDELLAALDEPKSTVKLLHGITGSGKTLVYMTAARKCLEQGKSVIVLVPEIALA 305 Query: 259 PQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGE-AAIVIGTRSALFTPFKNLGV 316 F + H + + + + A+++GTRSALF P +N G+ Sbjct: 306 YALWNGICPLFPDARKYLYHGYQTPVRKEAIFRALAEDDSPALIVGTRSALFLPVRNPGL 365 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYKQ+E Y A+++A AH ++LGSATP ++T QQ + ++ Sbjct: 366 IIVDEEHDESYKQEERLPYQAKEVAYVLAHMTGSLLVLGSATPDIKTFHAAQQGAFEVIS 425 Query: 377 LTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALL 435 + +R G + V+D + + AP R+++ + Q ++ LNRRGF+P + Sbjct: 426 MEKRVGKSMLPAVKVVDTSAIKNPEQPFAPETEARLKEVVAKGEQAVVMLNRRGFSPLIY 485 Query: 436 CHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLE 495 C DC +CP C+ T H+ + + CH+C + P C CG ++L+P+G GTE+LE Sbjct: 486 CTDCEEPFKCPHCNVSMTYHKGRERVICHYCGNAYHFPLPCSICGGSNLLPLGGGTERLE 545 Query: 496 QTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLV 554 + +A P I R+DRD+T R+ L++ L RG A++L+GTQML+KGH+FP VTLV Sbjct: 546 EQVAKALPPETKILRMDRDSTRRQERLDEILKSFARGDAQVLVGTQMLSKGHNFPGVTLV 605 Query: 555 ALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGY 614 + + D L D+RSAER QL QV+GRAGR K GEV++QT +P++P+ + Y Sbjct: 606 VVSEGDLGLNLPDYRSAERTFQLLVQVSGRAGRGEKPGEVIIQTRNPQNPIWGAVTSADY 665 Query: 615 DAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLG 674 F E+ + +RR + PP+T ++R + I + + + +G Sbjct: 666 KTFFEKEIEKRRRFRYPPFTKLTLIRISHPMGWEGEHLCPPFFSQIREA-AKESGIMAMG 724 Query: 675 PVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 PVPA + GR R+ LL+ ++ + + L PD ++++ +D+DP+ Sbjct: 725 PVPAPLAQLRGRKRFNCLLKSDDWMKTRELYAQILRR---NPDKKQIRITMDLDPVN 778 >UniRef50_A5USP2 Primosomal protein N' n=5 Tax=Chloroflexaceae RepID=A5USP2_ROSS1 Length = 868 Score = 632 bits (1630), Expect = e-179, Method: Composition-based stats. Identities = 222/698 (31%), Positives = 316/698 (45%), Gaps = 60/698 (8%) Query: 74 THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLK 133 + + + G L R + L L Sbjct: 187 DAELQAIYTALRERGLIARGATL-------ARARARPRTERLVRLALPPDEAHTALEGLA 239 Query: 134 RSPKQQQALAA---LRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNY 190 R+P+Q+ LA D + + L+AL ++GL D+ + Sbjct: 240 RAPRQRDLLAYLIDHPDPIPVPDLLTAANADSGTLRALERRGLIDIIARDVWRDPLALLD 299 Query: 191 AVSGERLRLNTEQATAVGAIHSAAD------------TFSAWLLAGVTGSGKTEVYLSVL 238 L+ Q A AI A D + +LL GVTGSGKTE+YL + Sbjct: 300 VPPDTPPTLSLAQQKAWDAIAGALDWCTNATEDRAAPAQTHFLLHGVTGSGKTELYLRAI 359 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA 298 L G+QALV+ PEI LT Q + RF RF + VLHS L+ ER W + + G+A Sbjct: 360 ARALRLGRQALVLTPEIALTTQMVRRFAARFPGQLAVLHSELSIGERYDQWRRLRRGDAG 419 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSAT 358 I IG+RSA+F P NLG+I++DEEH+ SYK RYHARD+A A +ILGSAT Sbjct: 420 IAIGSRSAVFAPLPNLGLIIVDEEHEPSYKHDAAPRYHARDVAQRLATITGSVLILGSAT 479 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNA------------RPAIQHVLDLKGQKVQAG---L 403 P++E+ + RLL L R A V+D++ + + Sbjct: 480 PSVESYAAARAGHLRLLELPERITTATGPDGLPHIRTLPLPHVTVVDMRRELAENNRSIF 539 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ------- 456 + AL + + L+ +Q ILFLNRRG A LC DCG CP C TLHQ Sbjct: 540 SRALQAALAETLKRGDQAILFLNRRGSASFFLCRDCGHAMTCPSCSSPLTLHQEAGDGQA 599 Query: 457 --AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 + L CH C+ + P CP C S + G+GT+++ + LFP R DRD+ Sbjct: 600 ASSGGMLICHTCNHRELPPALCPHCWSARIKSFGVGTQRVVDEITTLFPRTRTLRWDRDS 659 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 +RKG ++ L R A +L+GTQM+AKG P V +V ++ D L+ DFR+ ER Sbjct: 660 VTRKGDHDRLLDRFLRHEADVLVGTQMIAKGLDLPMVRMVGVVAADTGLYLPDFRAGERA 719 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL TQVAGRAGR V++QT+ PEH ++ Y AF EQ +A RR PP+ Sbjct: 720 FQLLTQVAGRAGRREAGAHVIIQTYAPEHYAIRAAQEHDYHAFYEQEIAFRRQTGYPPFA 779 Query: 635 SHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD--EKLWVLGPVPALAPKRGGRWRWQIL 692 V ++ A + L N I S + + ++GP PA + R+RW ++ Sbjct: 780 RLVRFVYGAGSDARARRAAEALANDIRSLAVRHLADDWSLVGPAPAFFRVQRNRYRWHLI 839 Query: 693 LQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L+ L + IP W++D+DP+ Sbjct: 840 LRALDPTPLIQALR--------IPPG----WIVDIDPV 865 Score = 75.3 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 71/192 (36%), Gaps = 34/192 (17%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSV----------- 49 +A VAL F Y +P + ++ G V P +Q+ G+V+ + Sbjct: 12 LADVAL--SANAVFTYRVPPSLRPLLRVGHLVWAPL-RQRHVQGVVLDLYAWGGSPHDPA 68 Query: 50 ------------SDASELPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLF 97 +D + L+ V+++ D + T + RL W ADYY + + L Sbjct: 69 VALSPPALRADPADWFDPQTPTLRDVIDIADPDIALTPAQIRLAHWIADYYRVSLYEALT 128 Query: 98 HALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVAT 157 P + + W AT +G +V+ +L + L R+ Sbjct: 129 LMTPPGIAREA------ETTWRATVEGHSVNPGALPPGERDVLYLLRRSGEMTERELRKR 182 Query: 158 LEFNDAALQALR 169 L +DA LQA+ Sbjct: 183 LRGSDAELQAIY 194 >UniRef50_B3T9T3 Putative DEAD/DEAH box helicase n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9T3_9ZZZZ Length = 832 Score = 631 bits (1629), Expect = e-179, Method: Composition-based stats. Identities = 249/821 (30%), Positives = 383/821 (46%), Gaps = 105/821 (12%) Query: 1 MPVAHVALPVPL---PRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA----- 52 +P A V + VP F Y +P M ++ G VRVPFG++ G+VV + Sbjct: 23 LPYADVVVSVPTTAPDDAFTYAVPADMDLEPGHLVRVPFGRRYAY-GVVVGRTGQMKAGY 81 Query: 53 -----------------------------------------SELPLNELKAVVEVLD--- 68 +A+V ++D Sbjct: 82 AKPVQRLVFPEPLLTPKQLDLGRWVSGYYQAHWFAALAPMLPPGFRTPTQAIVRLVDGAT 141 Query: 69 SEPVFTHSVWRLLLWAADYYHHPIGDVL-FHALPILLRQGRPAANAPMWYWFATEQ---- 123 E + + RLL + L P + R + A + +E Sbjct: 142 DEAGLSSAAQRLLSYLRRRPGAARLATLTRLLGPWVPNVVRSLSRAGLVEVGWSEPPTPR 201 Query: 124 ----------------GQAVDLNSLKRSPKQQ--QALAALRQGKIWRDQVATLEFNDAAL 165 + R+PKQ A G + Q A E+ +A+ Sbjct: 202 QGRLRAHLQLGTEPSLARQWAEERASRAPKQAGLARRLADPSGGAYLVQEARREYGASAV 261 Query: 166 QALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD----TFSAWL 221 AL GL + E E + L L QA A+ + +A D +L Sbjct: 262 TALLSTGLAQVQMEPSERQVGPAEPPPAETPLLLTEAQAAALREVRAALDSPSARPQVFL 321 Query: 222 LAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLN 281 L GVTGSGKTEVYL L + L++GK+ +++VPE+ LTPQ +ARF RF V VLHSGL Sbjct: 322 LQGVTGSGKTEVYLQALAHCLSKGKRGIILVPELSLTPQAVARFNARFPGQVGVLHSGLT 381 Query: 282 DSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDL 340 +++ W + + G +V+G+R A+F P + LG+IV+DEEH+ +YKQQ+ YHAR++ Sbjct: 382 PAQQADQWWQVRRGSYPVVVGSRGAVFAPQRELGLIVLDEEHEWTYKQQDSAPHYHAREV 441 Query: 341 AVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG------NARPAIQHVLDL 394 AV A ++LGSATP + + + +YRLL L R G A A V+D+ Sbjct: 442 AVRLAELTGAVVLLGSATPDVVSAYRARGGQYRLLTLPHRIGPSGATATAGMARAEVVDM 501 Query: 395 KGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHY 451 + + + + +L + +++ + +Q ILFLNRRG A + C CG++ C +C Sbjct: 502 RQELREGNRSAFSRSLQSALKECIGGGHQAILFLNRRGAASVVQCRSCGFVVRCWQCASP 561 Query: 452 YTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRID 511 YT H A+ L CH+C+ R +P CP C +L +GLGT+++ + + L GV + R D Sbjct: 562 YTYHGAEG-LVCHYCNRHRKMPATCPECRRPNLRYLGLGTQRVAEEVEHLLSGVRVLRWD 620 Query: 512 RDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSA 571 RDT A ++ L G A +L+GTQM+AKG H P VTLV + D L D+R+A Sbjct: 621 RDTARTGRAHQELLERFTSGQADVLVGTQMVAKGLHVPAVTLVGAVLADIGLHIPDYRAA 680 Query: 572 ERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLP 631 ER Q+ QVAGRAGR + G+V++QT+ P+H +++ + Y+AF E+ LA RR + P Sbjct: 681 ERTFQVLCQVAGRAGRGAEPGKVIIQTYLPDHYAVRSAQSQEYEAFYERELAFRRAHRYP 740 Query: 632 PWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA--DEKLWVLGPVPALAPKRGGRWRW 689 P+ V + + + Q++ + + + V+GP PA P+ G WRW Sbjct: 741 PFGRLVRLLFGHADAATSRQEAQRMAAALKRAAREWAISHVDVVGPAPAYPPRVRGLWRW 800 Query: 690 QILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 +LL+ + L ++ L N W++DVDP+ Sbjct: 801 HLLLRGDNPRLL---LDKVLVPPN---------WLVDVDPV 829 >UniRef50_A4CNF8 Primosomal protein N' n=15 Tax=Bacteroidetes RepID=A4CNF8_9FLAO Length = 839 Score = 629 bits (1623), Expect = e-178, Method: Composition-based stats. Identities = 219/684 (32%), Positives = 323/684 (47%), Gaps = 32/684 (4%) Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + +++D + V VL L + R + Sbjct: 169 EIGDIVDRKSVLP---------ILHRMIGRDLLVLQEKLQQGYKPLRARFIRLHPDY-ED 218 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRD-------QVATLEFNDAALQALRKKGLC 174 + ++S+ R+PKQ + L L Q + D + A L+AL KG+ Sbjct: 219 QAALGELMDSMGRAPKQSELLLHLFQLRRGTDKPIRSKVLQEQSGTSRAVLKALIDKGVL 278 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVY 234 + E + LN Q A+GAI S ++ LL GVT SGKTEVY Sbjct: 279 EEYFLE-EDRIVSPGGGAQHQPPELNALQEEALGAIRSGFESDRPVLLHGVTSSGKTEVY 337 Query: 235 LSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKN 294 L ++ +++A G+Q L +VPEI +T Q + R + V V HS + ER W + Sbjct: 338 LRLILDMVAAGRQVLYLVPEIAITEQLVRRLQRVLGHRVAVFHSRHSMQERAELWYHVRA 397 Query: 295 GE--AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIP 351 GE A++++G RSALF PF +LG+IV+DEEH+++YKQ + RYHARD A+ A Sbjct: 398 GEEKASVILGARSALFLPFADLGLIVVDEEHENTYKQFDPAPRYHARDAAIVLAGLSGAR 457 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLAPAL 407 ++LGSATP++E+ N + KY RL RR G+ ++DL + +K+Q + L Sbjct: 458 VVLGSATPSIESYHNARSGKYAYARLDRRFGDVLLPEMELVDLAEQFRKKKMQGHFSERL 517 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 + L QVILF NRRGFAP + C CG +C CD T H+ + LRCH+C Sbjct: 518 REEVEGALGQGGQVILFQNRRGFAPIVECASCGHAPQCRNCDVSLTFHRHRKELRCHYCG 577 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 R + C +CG+ L G GTEQ+E LA LFP +R+D DTT K A + + Sbjct: 578 FHRLLENTCEACGNPTLDTKGFGTEQVEAELAELFPKARTARMDLDTTRGKHAYGRIIQA 637 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 IL+GTQML KG F +V LV +++ D L FR+ ER QL TQVAGRAGR Sbjct: 638 FEARETDILVGTQMLTKGLDFRNVALVGIMNADSLLNFPHFRAHERCFQLLTQVAGRAGR 697 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 ++G V++QT++P H +LQ + YDA + + ER PP + + Sbjct: 698 TRERGRVLIQTYNPNHQILQQVASGAYDAMYAEQVYEREQFGYPPALRIIRITFRHREYN 757 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHI 704 + D VLGP + ++ ILL+ + ++ Sbjct: 758 RVGEGAAWFARSMRMHFGKD----VLGPEFPPVARIRNQYHKNILLKIRPGSGLAQTKNS 813 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 I + N I R ++ + +VD Sbjct: 814 IKRIESSFNAISQFRSIRVIYNVD 837 >UniRef50_A4SUT7 Replication restart DNA helicase PriA n=2 Tax=Polynucleobacter necessarius RepID=A4SUT7_POLSQ Length = 709 Score = 629 bits (1622), Expect = e-178, Method: Composition-based stats. Identities = 248/765 (32%), Positives = 376/765 (49%), Gaps = 95/765 (12%) Query: 1 MP---VAHVALPVPLPRTFDYLLPEGM---TVKAGCRVRVPFGKQQERIGIVVSVSDASE 54 MP V V + PL + FDYL + G V VPFG + +GIV+ VSD S+ Sbjct: 1 MPSPIVVQVVVDKPLAQGFDYLWDSNQLGNDPEVGQLVEVPFG-RASLVGIVIKVSDHSD 59 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP 114 L++LK++ V P F + RL+ +A+ YY H +G+ + +P + Sbjct: 60 YELDKLKSITRVA-PLPPFDAASLRLVNFASQYYIHALGETIIPTIPQM----------- 107 Query: 115 MWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC 174 W + + + A +K Sbjct: 108 ---WKKPDNWEKALEK----------------------------------ISAAEEKKRK 130 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSA--ADTFSAWLLAGVTGSGKTE 232 + E E + LN QA A+ + F LL G TGSGKT Sbjct: 131 KIQQEPSE---------GLIDEAHLNQGQALALEKLRQCSVEKEFKTILLQGQTGSGKTA 181 Query: 233 VYLSVLENVLAQGK-QALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWL 290 V+L+ L+ +L Q L++VPEI LTPQ R R F + VLHSG+++ R AW Sbjct: 182 VFLNWLKGILEDSSSQVLLLVPEINLTPQLERRVRAYFPDKKMVVLHSGVSEKNRGIAWY 241 Query: 291 KAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI 350 +A G+A I++GTR A TP NL IV+DEEHD SYKQQ+G RY ARDLA++RAH +I Sbjct: 242 EAMTGKAQIILGTRLAALTPLPNLRAIVVDEEHDPSYKQQDGIRYSARDLAIWRAHDLKI 301 Query: 351 PIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ---------- 400 P++L SATP+LE+ + +Y +RL +RA A +++ + + Q Sbjct: 302 PVLLASATPSLESWIAAKAGRYEYIRLDQRAQGAALPQVRLINTRDPQSQFSPGDIGRPI 361 Query: 401 --AGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQ 458 + + L + ++L+ Q ++ +NRRG+AP L C+ C W+++C +C Y +H+A Sbjct: 362 SASLITKTLANAISKNLENKKQSLILINRRGYAPILSCNACTWLSKCQQCSSYMVMHKAG 421 Query: 459 H-----HLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRD 513 L CHHC +P+P CP CG+ L +G GT+++E + ++P + R+D D Sbjct: 422 ALGRRPVLSCHHCGLVKPIPEHCPDCGNADLKTLGKGTQKIEDAIEEMWPSARVLRVDTD 481 Query: 514 TTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAER 573 + + E+ E+H G I++GTQM+AKGH + ++ LVA+LD D LFS DFR+AER Sbjct: 482 ASRKSKGAEELFQEIHAGNVDIVVGTQMIAKGHDYQNIGLVAVLDADSRLFSPDFRAAER 541 Query: 574 FAQLYTQVAGRAGRAGKQ----GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQ 629 QVAGRAGR+ K GE+ ++T +PE + Q LL D F ER + Sbjct: 542 LFAQLVQVAGRAGRSSKDDQGAGEIYIETQYPEAAVFQYLLRHDVDGFLGYLAHERDEAK 601 Query: 630 LPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRW 689 LPP++ +V AE + A FL L+ + S L L V PVP + G R Sbjct: 602 LPPFSYQGLVHAEAKSLDKAIQFLAALKGRLKSRGLMTPGLKVYDPVPRAVMRVAGTERA 661 Query: 690 QILLQHPSRVRLQHIINGTLALINTIPDSR-----KVKWVLDVDP 729 Q++L+ R +LQ ++ + R +++W+++ DP Sbjct: 662 QLVLEADDRRQLQDVLEAVDQDLRNGSQGRISKGDRIRWLIERDP 706 >UniRef50_B4WMN6 Primosomal protein N', putative n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WMN6_9SYNE Length = 889 Score = 628 bits (1619), Expect = e-178, Method: Composition-based stats. Identities = 229/767 (29%), Positives = 340/767 (44%), Gaps = 108/767 (14%) Query: 47 VSVSDASELPLNELKAVVEVLDSEPVFTHSVWRLLL--WAADYYHHPIGDVLFHALPILL 104 ++ S+ + LK + T ++ +LL W Y P Sbjct: 147 LNNSETKDYSWQYLKQKIRAPRRTGTATQALQQLLRLGWVESYLATP------------- 193 Query: 105 RQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA 164 R F T ++ R + LA D + L+ Sbjct: 194 ---RSPQPQKRQAVFLTRTIESPASGLTARQQELVHGLARCGGELWLSDALQQLKTTSQT 250 Query: 165 LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAG 224 L+ + G +A S + A+ + +L +Q+ A+ I + LL G Sbjct: 251 LKKIEALGYLVIAPRERLRSS-SHSTALPDQPKQLTQDQSAALSQI-QQIQGYEEVLLHG 308 Query: 225 VTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSE 284 VTGSGKTEVYL + + K ALV+VPEIGLTPQ RFR RF V V HSGL++ E Sbjct: 309 VTGSGKTEVYLQAIAPHVQARKSALVLVPEIGLTPQLTDRFRSRFGELVCVYHSGLSEGE 368 Query: 285 RLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVY 343 R W + +GE I+IGTRSA+F P N+G+I++DEEHDSS+KQ + YHA +A + Sbjct: 369 RYDTWRQMLSGEPQIIIGTRSAVFAPLPNIGIIILDEEHDSSFKQDQPMPCYHAGLVARW 428 Query: 344 RAHSEQIPIILGSATPALETL-------------CNVQQKKY------------------ 372 RA E P++LGSATP+LET + + ++ Sbjct: 429 RAELENCPLVLGSATPSLETWIRFKPLPAPLPQPNDSVEGEFPDSARLLGSTPSQIPRRG 488 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRG 429 L L R ++D++ + + + L T + ++ NQ ILF++RRG Sbjct: 489 HYLCLPTRVHAQPLPPIEIVDMRKELHEGNRTIFSRTLQTALETLVETGNQGILFIHRRG 548 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQ----AQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 + + C CG + ECP CD + HQ A L+CH+C + P +CP C S +L Sbjct: 549 HSSFVSCRSCGHVMECPNCDVSLSYHQTHAEAAARLQCHYCGVSQAHPSKCPKCLSPYLK 608 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G GT+++ LA P + R D DTT KGA LA RG A +L+GTQML KG Sbjct: 609 KFGSGTQRVVNDLAKYLPQIKCIRFDSDTTRNKGAHRALLARFARGEANLLVGTQMLTKG 668 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 P V LV ++ DG LF DFR++ER Q TQVAGRAGR + G V++QT+ PE+ + Sbjct: 669 IDLPQVVLVGVIAADGLLFMPDFRASERAYQTLTQVAGRAGRGEQPGRVIVQTYSPENAV 728 Query: 606 LQTLLYK------------------------------GYDAFAEQALAERRMMQLPPWTS 635 +Q L Y+ F +Q L +R +Q PP+ Sbjct: 729 IQALRGSSTEDEQGISMPQLEKKPMAKQQAIKPQMIDQYEQFLQQELRDRAELQYPPFGR 788 Query: 636 HVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL-----------WVLGPVPALAPKRG 684 +++R + +L + + + L L +LGPVPA + Sbjct: 789 LILLRLSGLEPETVEKAAARLADKLEAINLEVTPLEATDKNTAASYELLGPVPAPIHRVA 848 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 R+RW ILL+ + L ++ + + + +DVDP+ Sbjct: 849 RRYRWHILLKLAPKAPLPNLTR--------LRPPKGISLTIDVDPLN 887 Score = 79.9 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 81/226 (35%), Gaps = 23/226 (10%) Query: 3 VAHVALPVP--LPRTFD---YLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD--ASEL 55 A V + P R FD Y +P + V +G V VPFG Q G+V+ + +++ Sbjct: 2 WADVLVDCPGTANRAFDTYIYRVPSELVVSSGDIVGVPFGAQ-LIGGVVIRILTCLPNQV 60 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL-----RQGRPA 110 +K + V++ FT W+LL+ DYY P+ ++ ALP L R+ R Sbjct: 61 SAEAIKPIESVINKA-FFTKGYWQLLIRVEDYYQTPLIRIVRAALPPGLLSRTQRRVRLC 119 Query: 111 ANAPMWYWFATEQGQAVDLNSL---KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQA 167 + + + ++L + + + + K ALQ Sbjct: 120 QSISSETVKLSGYQSKLSQSALLLIETLNNSETKDYSWQYLKQKIRAPRRTGTATQALQQ 179 Query: 168 LRKKGLCDLASETPEFSDWRTNYA------VSGERLRLNTEQATAV 207 L + G + TP + A + L Q V Sbjct: 180 LLRLGWVESYLATPRSPQPQKRQAVFLTRTIESPASGLTARQQELV 225 >UniRef50_C2VXT4 Primosomal protein N' n=4 Tax=Bacillaceae RepID=C2VXT4_BACCE Length = 473 Score = 626 bits (1616), Expect = e-178, Method: Composition-based stats. Identities = 176/472 (37%), Positives = 273/472 (57%), Gaps = 6/472 (1%) Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 + RF+ RF + V VLHS L+ E+ W K E +V+G RSA+F PF+NLG+I+ID Sbjct: 1 MVDRFKGRFGSQVAVLHSALSVGEKYDEWRKILRKEVKVVVGARSAVFAPFENLGIIIID 60 Query: 321 EEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR 380 EEH+SSYKQ++ RYHARD+AV+R + PI+LGSATP LE+ ++ Y LL + +R Sbjct: 61 EEHESSYKQEDNPRYHARDVAVWRGQYHKCPIVLGSATPTLESFARAKKGVYELLTMEKR 120 Query: 381 AGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCH 437 ++D++ + + AL ++ L+ Q++LFLNRRG + ++C Sbjct: 121 MNEQALPTVEIVDMREELRDGNRSMFSKALHEKIADRLEKKEQMVLFLNRRGHSTFVMCR 180 Query: 438 DCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQT 497 DCG++ +CP CD T H+ H L+CH+C + +P CP+C ST++ G GT+++E+ Sbjct: 181 DCGYVVQCPHCDISLTYHKMNHRLKCHYCSYEENMPTACPACQSTYIRFFGTGTQKVEEE 240 Query: 498 LAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALL 557 + LFP + R+D DTTSRKG E+ L A IL+GTQM+AKG FP VTLV +L Sbjct: 241 ITKLFPEARVIRMDVDTTSRKGMHEKLLKAFGEEKADILLGTQMIAKGLDFPKVTLVGVL 300 Query: 558 DVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAF 617 D L DFR++E+ QL TQV+GRAGR GEV++QT+ PEH ++ + YD F Sbjct: 301 TADTMLHLPDFRASEKTYQLLTQVSGRAGRHELPGEVIIQTYTPEHYSIELAKNQQYDVF 360 Query: 618 AEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVP 677 +Q + RR Q PP+ V+V A +++ + S ++ VLGPV Sbjct: 361 FDQEMQMRRTRQYPPYYYVVLVTVSHPELLKAVQVTEKIVGHLRSH--CSQQTMVLGPVA 418 Query: 678 ALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + P+ R+R+Q ++++ L++++ ++++ +D +P Sbjct: 419 SAIPRIKDRYRYQCMIKYKREPNLKNVLKMVNEHYQAE-MQKELQISIDFNP 469 >UniRef50_A2BPX9 Primosomal protein N' (Replication factor Y) n=7 Tax=Prochlorococcus marinus RepID=A2BPX9_PROMS Length = 758 Score = 626 bits (1615), Expect = e-177, Method: Composition-based stats. Identities = 220/754 (29%), Positives = 359/754 (47%), Gaps = 37/754 (4%) Query: 4 AHVALPV-PLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL-- 60 + L + +F YL + + G V V + + G+V+S D S + +E Sbjct: 15 LEILLDIGSGNESFYYLDGNNLGAEVGDIVSVRL-RGRLLNGLVISKKDFSTINNDESNI 73 Query: 61 ---KAVVEVLDSEPV----FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 K++ + + S L+ + A +Y + A P + Sbjct: 74 TGGKSIRYLFVESILQKKIIDESWRELIDFLASFYMVSNLKMFKTAFPPGWIGKYKNFSK 133 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + E + D+ + K+ + L + W+ ++ FN + ++ K Sbjct: 134 GLKDQIWIETKKEFDIKKNGLTKKEFFLMDTLSKKGNWQSELIKSGFNYTLINSMVSKNY 193 Query: 174 CDLASETPEFSDWRTNY---AVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 + + ++ ++ ++ L EQ A + A LL G TGSGK Sbjct: 194 LVKSRRKKNINSKLNSFLKDHIATKKPNLTNEQKIAFQEFLT-MKPGDALLLWGETGSGK 252 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 TEVY+ + E+ + K L++ PEIGL PQ I RF RFN V HS + R W Sbjct: 253 TEVYMRIAEDQFLKKKSCLILAPEIGLIPQLIDRFSRRFNNVVYEYHSNCSPEHRTLIWK 312 Query: 291 KA-KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSE 348 K K+ E IVIGTRSA+F P KNLGVI++DEEHD SYKQ Y AR++A+ Sbjct: 313 KIIKSNEPLIVIGTRSAVFLPIKNLGVIIMDEEHDVSYKQDSPMPCYDAREIAIEIVKRN 372 Query: 349 QIPIILGSATPALETLCNVQQKK-YRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LA 404 +I GSATP+++T ++ ++L+R+ +R + ++D++ + + Sbjct: 373 SAKLIFGSATPSMKTWKKCIFERNFKLVRMIQRISSNETPEIKIIDMRDEFKMGNMKIFS 432 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLH---QAQHHL 461 L+ + Q Q I+ + RRG + L C +CG++ CP CD ++H Q + L Sbjct: 433 NELLQLLPQLRLKKEQAIILIPRRGHSGFLSCRNCGYLINCPNCDVPLSVHLGSQGKKWL 492 Query: 462 RCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGAL 521 RCH CD + + +CP C ST P G+GT+++ + L FP + + R DRDTTS K Sbjct: 493 RCHWCDHKSRLINRCPDCHSTAFKPFGIGTQRVIEFLNEEFPDLRVLRFDRDTTSGKDGH 552 Query: 522 EQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQV 581 L++ +G A IL+GTQMLAKG P++TL ++ DG L D + E+ QL+ QV Sbjct: 553 RDILSKFSKGDADILVGTQMLAKGIDIPNITLSVVIAADGLLHRPDISTEEKSLQLFLQV 612 Query: 582 AGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRAGRA K+G+V+ QT+ P HP++ L + Y+ F + R+ L P+ + +++ Sbjct: 613 AGRAGRAQKKGKVIFQTYKPNHPVISYLQKRDYERFLIENSRLRKDANLFPFCTICLLKL 672 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 N + +L +LS + ++GP P+L K G ++RWQIL+ P ++ Sbjct: 673 SGENYELTESIAIKLAKYLLSFC-EKKNWKLIGPAPSLIAKVGKKFRWQILIHGPEGTKI 731 Query: 702 ----QHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + I+ + + V +DV+P E Sbjct: 732 PLPDRSILWKLI--------PKNVFLTIDVNPAE 757 >UniRef50_C3XBI2 Primosomal protein N' directs replication fork assembly at D-loops n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XBI2_OXAFO Length = 677 Score = 626 bits (1614), Expect = e-177, Method: Composition-based stats. Identities = 243/646 (37%), Positives = 346/646 (53%), Gaps = 18/646 (2%) Query: 96 LFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV 155 + +P R+ E ++ + P + L + Q Sbjct: 37 MLVVVPFGRREEAGLIVDVKEESEIDENKLKDVVSVISEIPPLRTDWIDLCRFAAGYYQR 96 Query: 156 ATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSG--ERLRLNTEQATAVGAIHSA 213 E ++ + + V+ E+ L Q AV AI Sbjct: 97 PLGEVALPSIPKNIRANKKLALKRAVKALVQVPGNIVATNMEKPVLLKAQEQAVSAIVKT 156 Query: 214 ADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG--KQALVMVPEIGLTPQTIARFRERFN- 270 F ++L GVTGSGKTE+YL +E L Q Q L+MVPEI LTPQ R RF Sbjct: 157 RG-FKPFVLYGVTGSGKTEIYLQAIEEKLKQSDAMQVLIMVPEINLTPQLEVSVRSRFPG 215 Query: 271 APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 + LHS L +SERL WL+ G A IV+GTR A+ LG+IV+DEEHD SYKQQ Sbjct: 216 VTIATLHSRLTESERLKNWLQIHTGVARIVLGTRLAILASMPQLGLIVVDEEHDPSYKQQ 275 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-NARPAIQ 389 EG RY ARDLAV+RA+ IP++LGSATP+LE+ +V +Y L L RA +A Sbjct: 276 EGLRYSARDLAVWRANQLGIPVVLGSATPSLESWQHVLSGRYVKLELPERAVKDAVLPAI 335 Query: 390 HVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 ++D + +Q G +P+LI +++ L+ Q +LFLNRRG+AP + C CGWI+ C RC Sbjct: 336 RLIDATREPLQNGFSPSLINAIKRRLEKSEQSLLFLNRRGYAPVITCEACGWISVCERCT 395 Query: 450 HYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISR 509 Y H++ H LRCHHC +RP+PR CP CG+ L +G GT+++E+ LA FP I R Sbjct: 396 AYMVYHKSHHLLRCHHCGLERPIPRVCPDCGNIDLQTLGRGTQRIEEGLAGYFPDARILR 455 Query: 510 IDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFR 569 ID D+T +KG+LE L VH+G I+IGTQM++KGH F ++TLV +L+ D ALFS D+R Sbjct: 456 IDADSTRKKGSLEAALEMVHKGEIDIVIGTQMISKGHDFQNMTLVGVLNPDTALFSHDYR 515 Query: 570 SAERFAQLYTQVAGRAGRA-----GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE 624 + ER QVAGRAGR G + EV++QT +P HPL Q L Y + L E Sbjct: 516 AGERLFSQLMQVAGRAGRGGVSEHGNRSEVLIQTRYPMHPLYQAALTHDYGNYVSDLLME 575 Query: 625 RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRG 684 R+ LPP+ V++ AE ++A FL+Q + I E + + P+P + Sbjct: 576 RQNAGLPPFGFQVLLFAEARKVENALDFLRQAIDAIPEP----EAVIINEPIPMAMMRIA 631 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 R Q+L++ SR RLQ ++ + ++ + ++W ++VDP+ Sbjct: 632 NVERAQLLIESTSRGRLQGMLKEWIPVLRNMKT--GIRWHIEVDPM 675 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 5/135 (3%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT----VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 + V L PL FDY P K G V VPFG+++E G++V V + SE+ N Sbjct: 6 IVQVVLDTPLDFYFDYRYPVEAENFPVPKIGMLVVVPFGRREE-AGLIVDVKEESEIDEN 64 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +LK VV V+ P L +AA YY P+G+V ++P +R + A Sbjct: 65 KLKDVVSVISEIPPLRTDWIDLCRFAAGYYQRPLGEVALPSIPKNIRANKKLALKRAVKA 124 Query: 119 FATEQGQAVDLNSLK 133 G V N K Sbjct: 125 LVQVPGNIVATNMEK 139 >UniRef50_C8PQ74 Primosomal protein N' n=1 Tax=Treponema vincentii ATCC 35580 RepID=C8PQ74_9SPIO Length = 690 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 202/636 (31%), Positives = 295/636 (46%), Gaps = 9/636 (1%) Query: 97 FHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVA 156 A+ R+ A + D+ + R + + Sbjct: 59 RAAVRFGSRKLVGFIVAEYETLPKSCPFAEADIKPIDRIIDAEPLFTDEQAALARWMSRF 118 Query: 157 TLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT 216 + AL A+ G + + ++ + L L+ EQ +AV AI Sbjct: 119 YICAEGIALSAMLPSGKREAGELNTDGIEFAGTDFSAS-ALTLSEEQRSAVEAISGCTGG 177 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 + + G+TGSGKTEV+L LA GK + +VPEI L+ Q ++RF VL Sbjct: 178 -EFFYVYGITGSGKTEVFLQAASRALAAGKSVIYLVPEITLSHQVAETVKKRFGDRCAVL 236 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HSGL S+RL+ W + GEA IV+G RSA+F P ++LG+I+IDEEHD SYK RYH Sbjct: 237 HSGLTGSKRLAEWRRITRGEARIVVGVRSAIFAPVRDLGLIIIDEEHDGSYKSGFAPRYH 296 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG 396 AR +A+Y P+++GSATP++E ++ R LRL+ R + L Sbjct: 297 ARQVAMYLCKKHGCPLVMGSATPSVEAWHLMKTGAIRTLRLSERLSGGALPHIRIESLLH 356 Query: 397 QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ 456 L+ ALI MR+ Q ILFLNRRGF+ C +CG C C T H+ Sbjct: 357 --TAGALSAALIDEMRRTKTEGKQTILFLNRRGFSHFFKCKNCGHELLCKNCSVPLTFHK 414 Query: 457 AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTS 516 ++ ++CH+C P CP CGS +GTE +E+ + FP + RID D Sbjct: 415 SEGLMKCHYCGWTAKPPSACPECGSIEAGYTSIGTEYIEEQVRKTFPDCTVQRIDTDVLQ 474 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 + Q L + G IL+GTQM+AKG +FP V LV + D L DFR+AER Sbjct: 475 KNKQAVQILHDFRSGAIDILLGTQMIAKGLNFPGVRLVGIALADTGLQMPDFRAAERTFS 534 Query: 577 LYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSH 636 L QVAGRAGR GEV++QT++P HP + + + F Q L +R+ ++ PP+ Sbjct: 535 LIMQVAGRAGRYVPDGEVIIQTYNPYHPAIVCAQHNDVEGFYTQELHQRQALEFPPFARL 594 Query: 637 VIVRAEDHNNQHAPLFLQQLRNLILS--SPLADEKLWVLGPVPALAPKRGGRWRWQILLQ 694 + + + Q A R L+ P + + +LGP + G R Q+LL+ Sbjct: 595 IRLVFRSKDQQKAEEAAYGARELLPQLFPPEGAKDIEILGPSDCMLSLVAGNHRMQLLLR 654 Query: 695 HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 + +Q I + V DVDP+ Sbjct: 655 AETLAPMQKA---VYRFITEYKVAAGVYIETDVDPV 687 >UniRef50_Q1MRX6 Primosomal protein N' (Replication factor Y)-superfamily II helicase n=1 Tax=Lawsonia intracellularis PHE/MN1-00 RepID=Q1MRX6_LAWIP Length = 792 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 210/791 (26%), Positives = 344/791 (43%), Gaps = 66/791 (8%) Query: 3 VAHVALPVPLPRTFDYLLPEGMT---VKAGCRVRVPFGKQQERIGIVVSVS-DASELPLN 58 + L P Y LP + K G RV + GK+ R GI++S+ ELP N Sbjct: 4 YCTITLLSPPYSLLTYTLPSWLPYTLWKPGLRVAILLGKEMLRTGIILSLHTQKPELPHN 63 Query: 59 E-LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 L+ ++ L+ P+F++ +++ A + P G + LP+ LR Sbjct: 64 VVLRPILWALEKIPIFSYEYIKMIQELALRHSIPSGKIFASILPMGLRTTHVQMKCTYKN 123 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL------------ 165 Q + + + + + Q ++ ++ + Sbjct: 124 VLTNLQLKELKHKTEEELHDIGTKWISEENNDWLTSQTESMIVSEECILTVDPPWPIRPS 183 Query: 166 ---------------------------------------QALRKKGLCDLASETPEFSDW 186 + L + + Sbjct: 184 ATRQRVILDFLFTNGVVSKKELLQKLGKEYRTALTSLTRYGIISIKQEILTDKDELANTI 243 Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 + L EQ V + +LL G+TGSGKT +YL +++ + Sbjct: 244 ALLPPLIPFGYTLTEEQKEVVTLLKKELQKNQAKTFLLFGITGSGKTAIYLEIIQECIRN 303 Query: 245 GKQALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEA-AIVIG 302 + LV+ PE+ L + + F P + H + ++ + K + ++IG Sbjct: 304 NQSVLVLAPEVALALKLQHEIKTVFPIIPCYLSHGYQSSQQKEDLFRKIVKNQVAKVIIG 363 Query: 303 TRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALE 362 TRSALF P N+G I++DEEHD+S+KQ E YHA+++A +RA ++LGSATP ++ Sbjct: 364 TRSALFLPLTNIGSIILDEEHDASFKQGERLIYHAKEIAWFRAVQSNALLLLGSATPDIK 423 Query: 363 TLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHLQADNQV 421 T V+ K +++L R G ++D + + A +T +++ L+ Q Sbjct: 424 TFHAVENNKISIVKLHSRVGGGVLPTIKLIDSQQLESKDVTFARESLTTLKETLEVGEQA 483 Query: 422 ILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGS 481 ++ LNRRG+AP + C C CP CD + H+ Q L CH+C P CP C Sbjct: 484 VILLNRRGYAPIIYCITCRKSIRCPSCDVGMSYHKIQESLICHYCGKSIRFPCPCPFCKG 543 Query: 482 THLVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ 540 T +P+G GTE++E+ + + P + R+D DTT R G E+ L +G +++LIGTQ Sbjct: 544 TQFLPMGQGTEKVEEEIRAILPSDSMVLRLDYDTTRRPGRTEEILKTFAQGKSQVLIGTQ 603 Query: 541 MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH 600 ML+KGHHFP+VTLV +++ D L D+R+AE+ QL TQ AGRAGR K G+V++QTH Sbjct: 604 MLSKGHHFPNVTLVIVVNADIGLNIPDYRAAEKTFQLLTQSAGRAGRGEKAGQVLIQTHD 663 Query: 601 PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI 660 H + + Y F + +A R+ PP+ + ++R + + Sbjct: 664 TSHYCWKFIQQHDYLGFYKYEIALRQKWLYPPFINLALIRLSYPIEWKEGKIWIKKVQSL 723 Query: 661 LSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK 720 L + V GP + P GR R+Q LL+ + I I T +K Sbjct: 724 LQEWANKLNVSVRGPALSPIPILRGRNRFQCLLKSNNW----QHIRTIFYKIQTTALPQK 779 Query: 721 VKWVLDVDPIE 731 ++ VLD+DPI+ Sbjct: 780 LRVVLDIDPID 790 >UniRef50_C5NYR8 Primosomal protein N' n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYR8_9BACL Length = 787 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 215/789 (27%), Positives = 364/789 (46%), Gaps = 75/789 (9%) Query: 3 VAHVALPVP---LPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELP- 56 A V + V + + + YL+P+ G RV VPFG + + +V + S SE+ Sbjct: 2 YAEVIIDVNNHNVNQVYSYLVPDEFKDIDIVGYRVEVPFGTRTVQGYVVDTRSGNSEVEV 61 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAAN---- 112 N+ K + + D P+ T + L AD + +P L+ Sbjct: 62 TNKFKYIKRLKDDFPILTKEMILLSKVMADELFCTRIQAIETIVPTSLKNKYIEYYELLD 121 Query: 113 ------------------------------------------------APMWYWFATEQG 124 + E Sbjct: 122 GNKTLLLDYTKHFNTDNLIEKNKFEKILSIEQIGYLISLKAIRLISRIKEIKNNETEEFY 181 Query: 125 QAVDLNSLKRSPKQQQALAA--LRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 +K + KQ++ + L ++ + L +K + + E + Sbjct: 182 VLDKYEDVKLTKKQKELVDYLITNNKIKKSKVKDRLNIGNSVTKKLLEKNVIRIIEEDVK 241 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLEN 240 N ++ +L+ Q I + F+ +LL GVTG+GKTE+Y+ ++E Sbjct: 242 HD---INTSILDNNTKLSGHQQEIYDRISENFNTNKFNEYLLHGVTGAGKTEIYIKLVEA 298 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV 300 V+ GK+A+++VPEI LTPQ +FR+ F+ + V+HS LN E+ + W K ++G+ I Sbjct: 299 VIRVGKEAIILVPEIILTPQIEKKFRKVFSDNIAVIHSRLNAKEKYTEWKKIRDGKVKIC 358 Query: 301 IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA 360 +GTRSA+F PF NLG+I+IDEEH++SYKQ E RY A+D+A R + ++ SATP+ Sbjct: 359 LGTRSAVFAPFNNLGIIIIDEEHENSYKQTESPRYDAKDIARKRGIYNKSTVVYASATPS 418 Query: 361 LETLCNVQQK-KYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 ++ N ++ LL+LT R N P I V + + V +A L+T++++ ++ Sbjct: 419 VDLYYNFEKNNPNNLLKLTHRFNNKLPMINIVHTAEKEDV---IASELLTKIKEKIEKKE 475 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QV+L +N+RG+ + C CG + +C CD H+ + L CH C Q+ + C Sbjct: 476 QVLLLMNKRGYTNFIRCFSCGHLYKCENCDISLNYHKHDNSLHCHFCGYQKKISNILKCC 535 Query: 480 GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGT 539 LV G +++E+ L PGV I+R+D DTTSRKGA E+ L + + IL+GT Sbjct: 536 EHPELVSGNYGIQRVEEYLYQNIPGVRITRMDSDTTSRKGAYERLLTDFKNHKSDILLGT 595 Query: 540 QMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTH 599 QM++KG FP++TLV +L +D + F++ E+ QL Q AGRAGR+ K+GEVV QT+ Sbjct: 596 QMISKGLDFPNITLVGVLSIDNMIALPSFKANEKLFQLLVQTAGRAGRSKKEGEVVFQTN 655 Query: 600 HPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNL 659 + +L + Y+ F + L R+++ PP+ + + ++ + + + + Sbjct: 656 IASN-ILDYAIEHSYEKFYKYELNRRKLIDYPPFCKISFITIKGYDEKKTERVAKMIFDF 714 Query: 660 ILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRV--RLQHIINGTLALINTIPD 717 I L VLGP +L K +++ I +++ +L ++ Sbjct: 715 ISKK---QTNLSVLGPNKSLFYKINNEYKFNIAIRYQDEDYNKLYSLLKYINDYFAESFS 771 Query: 718 SRKVKWVLD 726 K+ +D Sbjct: 772 REKITITID 780 >UniRef50_C0GQE1 Primosomal protein N' n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GQE1_9DELT Length = 778 Score = 624 bits (1611), Expect = e-177, Method: Composition-based stats. Identities = 213/758 (28%), Positives = 338/758 (44%), Gaps = 46/758 (6%) Query: 16 FDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPV 72 Y LP + V G RV VP G+ + V+ S + +LK++ L+ E V Sbjct: 23 LSYALPPYLPVHVWHPGMRVLVPMGQSNKLCCAVLERSVPALPTEKKLKSIFWPLEKEAV 82 Query: 73 FTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQ------- 125 + +L A +G VL LP LR+ G+ Sbjct: 83 LSADYLEMLENVAARQLTSLGRVLASVLPASLRRVPDGWRDRKNKKIPFSSGRDNREFLS 142 Query: 126 ---------------------------AVDLNSLKRSPKQQQALAALRQGKIWRDQVATL 158 ++ Q + L Sbjct: 143 RLAEFWMQGELDVKSPGGKEPALTVSSDPPWPIRPQARVQWAVMDLLYAHGPRTASSIRA 202 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA-DTF 217 E + +AL+ +L + +G+ + EQ A+ + F Sbjct: 203 ELGQGSTKALQALQDKELVCPCKPGDEPEGGSLEAGQDFCFSPEQKEALKHLSPRLRQGF 262 Query: 218 SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN-APVEVL 276 A LL G+TGSGKT VYL + L G+ A+++ PEI + Q + R+ A + + Sbjct: 263 GACLLHGITGSGKTLVYLDLARQSLEMGRSAILLAPEIAIARQLYQQARQYLPGAAIYLH 322 Query: 277 HSGLNDSERLSAWLKA-KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRY 335 H S + +++ + + ++IGTRSALF P ++ G+IV+DEEHD S+KQ + Y Sbjct: 323 HGSKGPSSKEKTFVELGQEKKPVLLIGTRSALFMPVQDTGLIVLDEEHDESFKQDQTLIY 382 Query: 336 HARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLK 395 A+++A Y A E+ ++LGSATP ++T Q L+ + R G + +DLK Sbjct: 383 QAKEIAWYLASREEALLVLGSATPDVKTFHAAQAGHVSLVEMHSRIGKSTLPQVDFVDLK 442 Query: 396 -GQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTL 454 V +A +++ ++ Q ++ NRRG++P L+C C +C C T Sbjct: 443 NDPPVFGAMAKTCAEALKETVKRGEQAVIMHNRRGYSPVLMCESCSETVKCANCQVGLTY 502 Query: 455 HQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDT 514 H+ ++ L CH+C P C C + +PVG GTE++E+ LA P + R+DRD+ Sbjct: 503 HKKRNRLVCHYCGISVSFPPVCRHCRGSEFIPVGQGTEKVEEFLARHLPDTQVLRLDRDS 562 Query: 515 TSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERF 574 T G E+ L + +G ARIL+GTQML+KGH FP+VTL +LD D L D+RS+ER Sbjct: 563 TRSPGKAEKILQDFAQGQARILVGTQMLSKGHSFPEVTLAIVLDGDLGLGLPDYRSSERI 622 Query: 575 AQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWT 634 QL Q++GR+GR K G V +QT +P H Q + Y F +Q ++ R+ PP+ Sbjct: 623 FQLLVQLSGRSGRGEKPGRVFIQTRNPGHFCWQYIRDCDYKGFFQQEISRRQKFGYPPFV 682 Query: 635 SHVIVRAEDHNN-QHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILL 693 ++R + + FL LR + A K+ +LGP PA+ + R R Q L+ Sbjct: 683 RLGLIRFSFPDTWEGKADFLAGLRKKAKQA-AAVSKVTMLGPAPAVLSRLKNRERHQFLV 741 Query: 694 QHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + ++ L R+V+ LD+DP+ Sbjct: 742 KSSDWAGIKQAYLELRPLFERY---RQVRASLDLDPVN 776 >UniRef50_D1C6Y1 Primosomal protein N' n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6Y1_SPHTD Length = 824 Score = 622 bits (1604), Expect = e-176, Method: Composition-based stats. Identities = 206/652 (31%), Positives = 310/652 (47%), Gaps = 36/652 (5%) Query: 102 ILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSP---KQQQALAALRQGKIWRDQVATL 158 + G P + T G + +R +++ A + W D V Sbjct: 183 ARVVSGAPRTPTARYVRLITPDGVDLHRAPAQRRALEVIRRRVALAGDEPIPWHDLVRRP 242 Query: 159 EFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA--DT 216 AALQAL ++G+ ++ + +G L EQA A + +A Sbjct: 243 GVTAAALQALAERGVIEILELPSPSAPPAQPRPGAGSTY-LTPEQAAAWRTLLAALRAGE 301 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 +LL G+TGSGKTE+YL + +GKQ +++VPEI L QT+ARF ERF V VL Sbjct: 302 PEEFLLHGITGSGKTEIYLRAAAWCVGRGKQVIMLVPEIALAAQTVARFNERFPGQVAVL 361 Query: 277 HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYH 336 HS L + R W G IV+G RSALF P + +G++++DEEH+ +YKQ RYH Sbjct: 362 HSTLPPATRYHTWRAVAEGRIPIVVGPRSALFAPLERVGLVILDEEHEGAYKQDNPPRYH 421 Query: 337 ARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARP---------- 386 AR++A ++LGSATP + T + RLL L R G Sbjct: 422 AREVARRLIRQHNAVLLLGSATPDVTTYYAAETGAIRLLELPTRVGPRVLGKRGRPEHRT 481 Query: 387 ---AIQHVLDLKGQKVQAG---LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCG 440 V+D++ + Q + L +R+ +++ Q ILFLNRRG A + C CG Sbjct: 482 LDLPEVQVVDMRLELSQGHTHIFSRPLQAALRRAVESGEQAILFLNRRGAATLIQCRACG 541 Query: 441 WIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAP 500 + +CP CD H Q L CH C+ ++P P +CP+CGS+ + G GT+++E + Sbjct: 542 HVEQCPFCDVPLVYHADQRLLLCHRCNQRQPPPSRCPACGSSAVGYYGTGTQRVEAEVRR 601 Query: 501 LFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVD 560 L PG + R D+D R + V R +++GTQM+AKG FP V+ V +++ D Sbjct: 602 LIPGARVLRWDQDALRRGVEHRHLMQRVLRHEVDVIVGTQMVAKGLDFPLVSTVGIINAD 661 Query: 561 GALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQ 620 L D RSAER QL TQVAGRAGR V++Q++ P+H + Y AF + Sbjct: 662 TLLHLPDIRSAERTFQLLTQVAGRAGRRTPGARVIVQSYTPDHYAIDAASRHDYAAFYRE 721 Query: 621 ALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS--PLADEKLWVLGPVPA 678 +A RR PP+ + + ++ +L+ ++ L + +LGP PA Sbjct: 722 EIAFRRKHGYPPFRRLIRFVYRHPDEVTCQTTAAEVADLLAATADRLGARDVDLLGPTPA 781 Query: 679 LAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 K GR++WQILL+ + ++ W +DVDP+ Sbjct: 782 FTAKVRGRYQWQILLRGADSHAVASAVDL------------DPGWAIDVDPL 821 >UniRef50_C2M4N3 Primosomal protein N` n=1 Tax=Capnocytophaga gingivalis ATCC 33624 RepID=C2M4N3_CAPGI Length = 818 Score = 620 bits (1600), Expect = e-176, Method: Composition-based stats. Identities = 204/680 (30%), Positives = 310/680 (45%), Gaps = 28/680 (4%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K + VL + + RL + Y + L + R Sbjct: 156 KNPIGVL--KSLLEKDAIRLSEKIFEKYQPKVEKYLRLSSTYEDRNALNTLLEGDTLTSK 213 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 ++ +L+ + + + + E + + L+ + +KG+ ++ +E Sbjct: 214 AQEKLLWAFVALR---------SQKQTSITPQQLLEKAEVSASVLKKIVEKGILEVYTEA 264 Query: 181 PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN 240 + ++A + L Q A+ + + LL GV SGKT +Y ++E Sbjct: 265 VDR----VSFASDSDTWELTPAQEKALEEVQEQFSQKNTVLLQGVAASGKTLLYSQLIEQ 320 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE--AA 298 LAQGK L +VPE+GL+ Q + R F + V H + ER+ W + A Sbjct: 321 TLAQGKSVLYLVPEVGLSVQLMNRLEHFFGDKMSVYHGKYSSHERVEVWNNVLANKPKAQ 380 Query: 299 IVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAHSEQIPIILGSA 357 V+G R+A+ PF +LG++++DEEHD SYKQ++ R+ RD A+ AH +LGSA Sbjct: 381 FVLGVRAAVCLPFHDLGLVIVDEEHDLSYKQEQTPPRFQVRDTALMLAHLHGAKTLLGSA 440 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKV----QAGLAPALITRMRQ 413 TP+ E+ N Q KY ++L R + ++DLK + Q + L+ + Q Sbjct: 441 TPSAESYYNAQVGKYGFVQLLERYTGIQAPTIELVDLKEKTKKKETQGHFSDTLLAAIEQ 500 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVP 473 L QVIL NRRG+AP L C C I +CP CD T HQ Q+ LRCH+C P P Sbjct: 501 TLAQHRQVILLQNRRGYAPYLQCDKCDTIPQCPNCDVSLTYHQLQNQLRCHYCGYTIPTP 560 Query: 474 RQCPSCG-STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 CP+CG + L GLGTE++E+ L FP I R+D DTT K E+ + RG Sbjct: 561 MSCPACGEHSSLKTKGLGTEKVEEELLQFFPKARIERMDMDTTKGKYGFEKIIHHFERGE 620 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 IL+GTQM++KG FP V LV +++ D L DFR++ER QL + +AGRAGR QG Sbjct: 621 TDILVGTQMVSKGLDFPKVGLVGVMNADLFLHQPDFRASERAFQLLSHIAGRAGRKE-QG 679 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 V++QT++P LQ + Y A L ER PP+ V + + Sbjct: 680 RVLIQTYNPFQETLQRIQQGEYTAMMTAQLTERSDFHYPPYYRLVRIIFRHRELERINQA 739 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL---QHIINGTL 709 Q + + + L + VLG + + ILL+ +V L + I Sbjct: 740 GQWFADGLR-TGLTGYPVEVLGAEFPPISRIRNEYIKHILLKIAPKVPLSVVKDYILRLE 798 Query: 710 ALINTIPDSRKVKWVLDVDP 729 + R V +VDP Sbjct: 799 QSFYSTALFRPVMLSYNVDP 818 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 93/262 (35%), Gaps = 31/262 (11%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M VALP+PL + F Y + ++AG RV VPFGK + G+V+ V P Sbjct: 4 MYYTDVALPLPLRQAFTYEVNPEQADFLRAGMRVVVPFGKAKIYTGVVIRVHQHK--PSY 61 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K + +LD +P+ + +L W + YY G+VL +P L Sbjct: 62 PTKPIEFILDEQPMLSSRQLQLFSWISAYYLSTFGEVLKMGMPSSLLLESETIVEKTSTP 121 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + + + Q +L G +V + L++L +K L+ Sbjct: 122 ITVATLSDEEFLVYE-ALGQASSLTTKEVG-----KVLQRKNPIGVLKSLLEKDAIRLSE 175 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 + E + + L E A+ LL G T + K + L Sbjct: 176 KIFEKYQPKVEKYLR---LSSTYEDRNALNT-----------LLEGDTLTSKAQEKLLWA 221 Query: 239 ENVLAQGKQALVMVPEIGLTPQ 260 L KQ +TPQ Sbjct: 222 FVALRSQKQ-------TSITPQ 236 >UniRef50_B1H0K0 Primosomal protein N' n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1H0K0_UNCTG Length = 661 Score = 620 bits (1599), Expect = e-176, Method: Composition-based stats. Identities = 200/653 (30%), Positives = 324/653 (49%), Gaps = 18/653 (2%) Query: 87 YYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALR 146 YY P + P + R A + K+ + Sbjct: 17 YYLPP-----ENMNPESIVGKRVKVQFGKRILTAYAISCRNVESDSGLKLKRIIKIIDDD 71 Query: 147 QGKIWRDQVATLEFNDAALQALRKK--GLCDLASETPEFSDWRTNYAVSG--ERLRLNTE 202 + + +L + + ++ + P+ N ER LN + Sbjct: 72 SLITGETMEIADYISKNYVCSLGEALASIIPVSMKPPKRIPKNRNKYEKKIYERHILNAQ 131 Query: 203 QATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQ 260 Q+ AV I+ + ++A+LL GVT SGKTEVY+ +E VL Q + A++++PEI L Q Sbjct: 132 QSNAVNLINESLGKKVYNAFLLYGVTASGKTEVYIKAVEYVLKQNRSAIMLIPEISLAIQ 191 Query: 261 TIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVID 320 + +RF A + V HSG+++ E+ S + KAKNG I+IG RSA+F PFKNLG+I++D Sbjct: 192 FVDIMTKRFGASIGVWHSGISNIEKYSLFSKAKNGSIKIMIGARSAVFAPFKNLGLIIVD 251 Query: 321 EEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRR 380 EEH+ +YKQ++ Y R++A R ++LGSATP+LE+ + + + L+ L R Sbjct: 252 EEHEHTYKQEQKPSYDTREIAKRRGVYHNAVVVLGSATPSLESYKDALENRLNLIELNER 311 Query: 381 AGNARPAIQHVLDLKGQKVQAGLA-PALITRMRQHLQADNQVILFLNRRGFAPALLCHDC 439 VL L+ + +AGL P I M + L Q+I+FLNRRG++P ++C C Sbjct: 312 ICKKELPEVKVLTLRDRIFKAGLLLPETIEAMSKALARKEQIIVFLNRRGYSPTIMCRKC 371 Query: 440 GWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLA 499 G + +C +C H+ L+CH+C + +P C C S + G GT+++E L Sbjct: 372 GIVYQCSKCSVSMVFHRNPELLKCHYCGLTKNLPVACSVCKSRDIAVFGAGTQKVEDELK 431 Query: 500 PLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDV 559 LF I R+DRDT S + E+ + ILIGTQM+AKG FP V+L +++ Sbjct: 432 KLFKTAKIFRLDRDTASSEENYEKVYRGIKNEEYDILIGTQMIAKGFDFPRVSLACVVNA 491 Query: 560 DGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAE 619 D +L+ F+S E+ QL TQVAGR+GR +G V++QT+HP+H ++ + +F + Sbjct: 492 DTSLYLPGFKSVEKTFQLITQVAGRSGRRDMRGSVIVQTNHPQHYAIEYAKNHDFVSFYK 551 Query: 620 QALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLA-DEKLWVLGPVPA 678 + ER+ + PP+ + + + A ++L +L+ +S + L +LGPVPA Sbjct: 552 TEIEERKKLFYPPYCDVAKISIRNKEEKKADDDSEKLFSLLENSIKSYKLGLKLLGPVPA 611 Query: 679 LAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 K +R I+++ L+ L+ T S ++V P + Sbjct: 612 YIAKLNNVYRQHIIIKGGRENILK-----LAGLLETFKQSSGTFIGIEVMPSD 659 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 3/171 (1%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVK--AGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M V LPVPL + F YL PE M + G RV+V FGK+ +S + Sbjct: 1 MIVLESVLPVPLNKIFYYLPPENMNPESIVGKRVKVQFGKR-ILTAYAISCRNVESDSGL 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +LK +++++D + + T + + + Y +G+ L +P+ ++ + Y Sbjct: 60 KLKRIIKIIDDDSLITGETMEIADYISKNYVCSLGEALASIIPVSMKPPKRIPKNRNKYE 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR 169 + ++ ++L V + ++A+ Sbjct: 120 KKIYERHILNAQQSNAVNLINESLGKKVYNAFLLYGVTASGKTEVYIKAVE 170 >UniRef50_A6LEB0 Primosomal protein N' n=32 Tax=Bacteroidetes RepID=A6LEB0_PARD8 Length = 820 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 211/643 (32%), Positives = 324/643 (50%), Gaps = 27/643 (4%) Query: 108 RPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQAL-----------AALRQGKIWRDQVA 156 + A + + E LKR+ KQ+ L AL + ++ + Sbjct: 183 KTQAFIRLAEAYWDETKLQAVFEELKRAKKQELLLVSFLDLSHTLNPALSKELSKKELLE 242 Query: 157 TLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT 216 + A L+ L K+G+ + + + + E L+ Q A G IH A T Sbjct: 243 RSGYTSAVLEGLLKRGILESYEKEVGR--LQVSVCRLQEPNPLSPAQEKAYGEIHEAFKT 300 Query: 217 FSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL 276 LL GVT SGKTE+Y+ ++ VL G+Q L M+PEI +T Q R + F + V Sbjct: 301 KEVCLLHGVTSSGKTEIYVRLIHEVLRLGRQVLYMLPEIAITTQITERLAKLFGDKLLVY 360 Query: 277 HSGLNDSERLSAWLKAK-NGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWR 334 HS +D+ER+ W K + E +V+G RS+LF PFK+LG+I++DEEH+++YKQQ+ R Sbjct: 361 HSKFSDNERVEVWNKLLHSDEPMLVLGVRSSLFLPFKDLGLIIVDEEHENTYKQQDPAPR 420 Query: 335 YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL 394 YHAR+ A+ A +LGSATP++++ N KY L+ L+ R G+ +D+ Sbjct: 421 YHARNAAIVLAGMHGGKTLLGSATPSIDSYFNATAGKYGLVELSTRYGDCLMPEIITVDV 480 Query: 395 KGQKVQAG-----LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCD 449 K K + +P L+ ++R+ L Q ILF NRRGFAP + C CGW+ C CD Sbjct: 481 KELKRKKIMKDTLFSPLLVEKVREALSRGEQAILFQNRRGFAPMIECRGCGWVPHCVNCD 540 Query: 450 HYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISR 509 T H+A + L CH+C +P+ CP C T G GTE++E+ +A FP + R Sbjct: 541 VSLTYHKAHNQLVCHYCGYTYRLPQVCPECKGTEFKMQGFGTEKVEEEIAGQFPAAKVER 600 Query: 510 IDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFR 569 +D DT + A E+ +++ +G +ILIGTQML+KG F +V++V +L D + DFR Sbjct: 601 LDFDTARTRTAYERIISDFEKGKTQILIGTQMLSKGLDFGNVSVVGILSADSLMNFPDFR 660 Query: 570 SAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQ 629 + ER QL QV+GRAGR K+G V+LQT PEHPL++ + + Y L+ER M + Sbjct: 661 AHERAYQLMVQVSGRAGRRDKRGTVILQTTQPEHPLIRMVQHFAYKEMVSLQLSERSMFR 720 Query: 630 LPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRW 689 PP+ +++ N + + + VLGPV + Sbjct: 721 YPPYYRLIVLILRSRNEEALQEMSALYAEKLRARLGE----RVLGPVTPPITRVQTLHIK 776 Query: 690 QILLQ---HPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 +I+L+ L+ I+ G + +++ DVDP Sbjct: 777 KIVLKIEISAGIAPLREILEGIHTEMQGYVPFKQLLVHYDVDP 819 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 54/219 (24%), Positives = 82/219 (37%), Gaps = 9/219 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A V LP+PL ++ Y +PE M V GCRV V FGK++ IV+ V D + Sbjct: 1 MKYADVILPLPLENSYTYRIPEDMERAVTPGCRVIVHFGKKRYYTAIVMEVHDREPVSDF 60 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 E K + +LD+ PV R W + YY +GDV ALP L+ A + Sbjct: 61 ETKEIYALLDATPVLRRPQLRFWKWISSYYICKLGDVYKAALPSGLKLESETAVTYNEDF 120 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 AT + + L + + + K V + + KG +++ Sbjct: 121 EATAPLRPNEQAVLDAFSGVLKLTISELEKKTGLRNVVPIVSSLMV------KGAVEVSE 174 Query: 179 ETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT 216 E F + E T+ + A Sbjct: 175 ELKRGFVPKTQAFIRLAEAYWDETKLQAVFEELKRAKKQ 213 >UniRef50_C7H119 Primosomal protein N' n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H119_9FIRM Length = 675 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 188/552 (34%), Positives = 297/552 (53%), Gaps = 10/552 (1%) Query: 190 YAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQ 247 + G+++ L Q I + + +LL GV GSGKTE+Y++ +E +A K Sbjct: 122 ESKDGKKVMLTPTQQALANEIKKEVEASSPEIFLLKGVAGSGKTEIYINAVEQAVASSKS 181 Query: 248 ALVMVPEIGLTPQTIARFRERFNA-PVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 +V++PEI LT Q ARFRE F + ++HSGL ++R + +L+ ++ +A +VIG RSA Sbjct: 182 GIVLLPEIALTKQITARFREHFGDEKIAIIHSGLTRAQRFNEFLRIRDNDAMVVIGARSA 241 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 +F P +NLG+I+IDEE DSSYK RY A ++ V R+ E PI+LGSATPA+ Sbjct: 242 VFAPVRNLGIIIIDEEQDSSYKATNSPRYDAVEVGVMRSRFESAPIVLGSATPAISDYYR 301 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPA---LITRMRQHLQADNQVIL 423 ++ K RLL L R ++++ + + +P L+ MR + QV+L Sbjct: 302 AKEGKMRLLSLDERYNGGSFPDIEIVNMTDEMRKGNFSPLSALLMKEMRATIDKGKQVLL 361 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 FLNRRG+AP ++C C I +C +C H+ CH+C S +C CGS Sbjct: 362 FLNRRGYAPIIMCESCKEILKCEKCGIPLVYHREDGRALCHYCGSSETAFSKCKKCGSKQ 421 Query: 484 LVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLA 543 + GLG EQL + + F ++R+D D + G LE+ L + G +LIGTQ+++ Sbjct: 422 IQYRGLGIEQLTELVQGEFKDAKVARLDSDVAVKAGKLEEVLEQFSDGKIDVLIGTQIIS 481 Query: 544 KGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEH 603 KG F +VTL ++++ D L DFR+ ER QL Q AGRAGR +G+VVLQT + Sbjct: 482 KGLDFENVTLASIIEADAGLQIPDFRADERVFQLIVQTAGRAGRRDDRGKVVLQTLSKDA 541 Query: 604 PLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS 663 ++ + Y+ F +A R+ M PP+ S + + + A F +N I+ + Sbjct: 542 DVVNMAAQQDYEGFYSSEIAFRKKMGYPPFGSIIKLEFSSDKKEGALDFANSFKNSIIRT 601 Query: 664 PLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS--RVRLQHIINGTLALINTI--PDSR 719 K+ VLGPVP+ K G +R++++L+ P R + H+I + + S+ Sbjct: 602 LEGIFKIDVLGPVPSFIQKSDGMYRYRLILKMPREVREKYSHLIRWQIDVFKNRKNKASK 661 Query: 720 KVKWVLDVDPIE 731 K + ++D +P + Sbjct: 662 KERILVDAEPYD 673 Score = 93.8 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 40/228 (17%), Positives = 83/228 (36%), Gaps = 10/228 (4%) Query: 1 MPVAHVALPVPLP---RTFDYLLPEGMTVKAGCRVRVPFG-KQQERIGIVVSVSDA--SE 54 M A V + + + + YL+ + ++ G V+VPFG K + +V ++D+ SE Sbjct: 1 MKYAKVVVDIKADFADKLYTYLV-GDLNLEVGTAVKVPFGSKNTLKKAVVFELTDSRGSE 59 Query: 55 LPLN-ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANA 113 + + +LK++ V+D F + RL W + Y DV+ P R R Sbjct: 60 IEGDIDLKSIDSVMDDLS-FPEELVRLAKWVRNRYFTSYADVVGVISPKGDRPKRALKPT 118 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 ++ + + + ++ + A VA + + A+ + Sbjct: 119 HNLESKDGKKVM-LTPTQQALANEIKKEVEASSPEIFLLKGVAGSGKTEIYINAVEQAVA 177 Query: 174 CDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWL 221 + T + R E+ + + + A F+ +L Sbjct: 178 SSKSGIVLLPEIALTKQITARFREHFGDEKIAIIHSGLTRAQRFNEFL 225 >UniRef50_A6GGW7 Primosomal protein N' n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GGW7_9DELT Length = 857 Score = 619 bits (1597), Expect = e-175, Method: Composition-based stats. Identities = 224/564 (39%), Positives = 299/564 (53%), Gaps = 19/564 (3%) Query: 184 SDWRTNYAVSGERLRLNTEQATAVGAIHSAAD--TFSAWLLAGVTGSGKTEVYLSVLENV 241 D A + L L +Q A+ + +A + F++ LL G+TGSGKTEVYL ++ +V Sbjct: 291 DDGADPGADGSKGLTLTGDQRRALEGLRAAFEAGRFASALLHGITGSGKTEVYLRLIASV 350 Query: 242 LAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVI 301 + G A+V+VPEI LTPQ RFR RF V VLHSGL +RL AW + GE IVI Sbjct: 351 IEAGGGAIVLVPEIALTPQLAQRFRARFGDAVAVLHSGLTAQQRLDAWEHIRAGERPIVI 410 Query: 302 GTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPAL 361 G RSA+F P L VIV+DEEHD S+KQ+EG RY+ARD+A+ R S ++LGSATP+L Sbjct: 411 GARSAIFAPVPKLRVIVVDEEHDGSFKQEEGVRYNARDVALVRGRSLDAVVVLGSATPSL 470 Query: 362 ETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK--VQAGLAPALITRMRQHLQADN 419 E+ N ++ + L LT R V++L+ + L+ L R+ A Sbjct: 471 ESWRNAREGRLALWSLTTRPTPRPLPEVEVVNLREHLPDPETLLSARLRQRLLDTANAGE 530 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHY-YTLHQAQHHLRCHHCDSQRPVPRQCPS 478 Q ILFLNRRG+ AL C CG +CP C T H ++ L CH C P C S Sbjct: 531 QSILFLNRRGYTTALSCKTCGSFQQCPDCSAPSMTYHLHRNRLMCHLCGHIEAAPSHCLS 590 Query: 479 CGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIG 538 CGST L GTE++E +A PGV + R+DRDT+ K LE L R A +LIG Sbjct: 591 CGSTELEHGAAGTERVEVAIAAALPGVRMLRLDRDTSRGKALLE-LLGRFRRREADVLIG 649 Query: 539 TQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQT 598 TQML+KGH FP VTLV +L D L DFR+ ER QL TQVAGRAGR + G VV+QT Sbjct: 650 TQMLSKGHDFPGVTLVGVLRADHGLGLPDFRATERVFQLLTQVAGRAGRGDRPGRVVVQT 709 Query: 599 HHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRN 658 P+HP ++ ++ FAE L R PP +VR + + Q + + Sbjct: 710 WAPDHPAIRYARTHDFEGFAEHELEARAKSGNPPIGHLALVRIHGTDRRAVDARAQAVAD 769 Query: 659 LIL------------SSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIIN 706 S+ A + +LGPV + + R R Q+LL+ SR L+ I++ Sbjct: 770 FARALGRRIVLAAGASATPASAPVEILGPVDSPIERINKRHRMQVLLRARSRRPLRWILD 829 Query: 707 GTLALINTIPDSRKVKW-VLDVDP 729 + R +DVDP Sbjct: 830 HLRHRLGPDGRGRSQTVARVDVDP 853 Score = 91.1 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%) Query: 10 VPLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLNELKAVVEV 66 + L R F YL+PE M +AG RV VPFG + +G+V + +L+ ++E Sbjct: 1 MALDRGFTYLVPEDMATPEAGARVLVPFGAR-VLVGVVREAKAEFGPDDDPAKLRELLER 59 Query: 67 LDS--EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL 104 +D P + + RL W A+YY P+G+V ALP + Sbjct: 60 VDPPGRPALSLDLVRLCEWIAEYYVAPVGEVYRMALPGMA 99 >UniRef50_A0LI73 Primosomal protein N' n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LI73_SYNFM Length = 814 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 221/626 (35%), Positives = 320/626 (51%), Gaps = 7/626 (1%) Query: 112 NAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKK 171 + + + L G + D L+ L Sbjct: 186 PKTVKVVRLAGEPDPGPIEHNANLKSLVALLRGADAGIPLSVVRREVRNADYWLRKLAAA 245 Query: 172 GLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS--AADTFSAWLLAGVTGSG 229 G + E + RL +Q A+ A+ F ++L GVTGSG Sbjct: 246 GTVRVEEREEERTFRLAQALPEAPPPRLTPDQQEVFDAVSPYLASGPFQPFMLFGVTGSG 305 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KTEVY+ ++E L +G+ ALV+VPEIGL+ Q A FR+RF + V HSG+ + R W Sbjct: 306 KTEVYMRLVEETLKRGRGALVLVPEIGLSTQLEALFRQRFGERLAVWHSGVPEGARHDQW 365 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 G +V+G RSA+F P ++ G+IV+DEEHD SYKQ + RYHARD A+ RA Sbjct: 366 RDILAGRRTVVLGARSAVFMPVRDPGLIVVDEEHDPSYKQDDHLRYHARDAALVRARLLG 425 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG-LAPALI 408 IP++LGSATP+L+T+ + ++YR L L RR + ++D++ + +A L+ L Sbjct: 426 IPVVLGSATPSLQTIHQSRLERYRPLLLPRRILDRPLPTLEIVDMRRESSRARILSHRLR 485 Query: 409 TRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDS 468 T + + LQA +Q +LFLNRRGFA LC CG + +C C T HQ + LRCH+C Sbjct: 486 TALAETLQAGDQALLFLNRRGFATCFLCGVCGAVLQCSSCSVSLTYHQREKILRCHYCGK 545 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + VP +CP+CG L P+G GTE++E+ + P I RIDRDT SR L + L V Sbjct: 546 EEAVPERCPACGHAGLFPLGFGTERVEEEVRRELPDARIVRIDRDTVSRPEDLVESLDAV 605 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A +LIGTQM+ KGH FPD+TLV +++ D AL DFR+ E QL QVAGRAGR Sbjct: 606 RSGRANVLIGTQMVGKGHDFPDITLVGVINADTALQFPDFRAGETTVQLLMQVAGRAGRG 665 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 + G V+LQT++ H L+ +L Y+ F + L R ++ PP+ + + Sbjct: 666 EQPGRVILQTYNQFHYTLEAVLALDYERFCDIELQSREQLRYPPFARFLKFLVTSRSEAQ 725 Query: 649 APLFLQQL----RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHI 704 ++L R + VLGP PA K R+RW + ++ + LQ Sbjct: 726 TREAARRLAALCRETAERFDASGRPAAVLGPSPAPLLKLKDRYRWHVFVKAWTSRDLQDF 785 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 L+ + P R+V+ +D DP+ Sbjct: 786 TETVLSGARSDPALRRVQLAVDRDPM 811 Score = 114 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 77/213 (36%), Gaps = 8/213 (3%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTV--KAGCRVRVPFGKQQERIGIVVSVSDASEL---P 56 P A V++ L +T Y +P + + G RV VP G++ G++++ +D P Sbjct: 4 PFAEVSIFSALEKTLHYAIPSELNAGARPGARVLVPLGRRSA-TGLILARADCPPPDMPP 62 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMW 116 LK ++ VLD PV T + L W A YY +P+G+VL ALP Sbjct: 63 EVRLKPILAVLDDAPVLTPDLIALCRWLASYYFYPVGEVLQTALPSGATNAPQVFVRLTP 122 Query: 117 YWFATEQGQAVDLNSL--KRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLC 174 + Q ++ L +R P L A Q N ++ + Sbjct: 123 AGEERAETQRDEIGELLHRRGPTALAELEAACGSPRGFRQKLRELENRGLVERCHEWRCG 182 Query: 175 DLASETPEFSDWRTNYAVSGERLRLNTEQATAV 207 +T + N + A+ Sbjct: 183 LPGPKTVKVVRLAGEPDPGPIEHNANLKSLVAL 215 >UniRef50_Q1RI08 Primosomal protein N' n=15 Tax=Rickettsia RepID=PRIA_RICBR Length = 648 Score = 614 bits (1585), Expect = e-174, Method: Composition-based stats. Identities = 193/564 (34%), Positives = 294/564 (52%), Gaps = 14/564 (2%) Query: 169 RKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGS 228 K + + + L+ EQ A+ ++ D+ L+ GVTGS Sbjct: 92 IAKLVLPVDIAEKPIKVKEQKINNNFTLPDLSEEQKQALQMLN---DSNKPILIKGVTGS 148 Query: 229 GKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSA 288 GKTEVY ++ LA+GKQALVM+PEI L+ Q I RF+ERF + +S + +++ Sbjct: 149 GKTEVYFYLIAEYLAKGKQALVMLPEIALSTQIINRFKERFGFDPIIWNSSVTKAQKKMI 208 Query: 289 WLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE 348 + IVIG RS+LF PFKNLG+IVIDEEHD SYKQ +G Y+ARD A+ R+ + Sbjct: 209 LRGILEDKVKIVIGARSSLFLPFKNLGLIVIDEEHDDSYKQDDGVLYNARDTAIVRSTFD 268 Query: 349 QIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPA 406 + I+L SATP++ET+ N KY ++ L+ R NA ++D+ +++ L+ Sbjct: 269 KAQIVLCSATPSIETMYNANIGKYSVINLSSRYKNAVLPNIEMIDMTKEELPKNCYLSNI 328 Query: 407 LITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHC 466 LI ++ +L+ Q +LFLNRRG+AP +LC CG C C + +H++ L CHHC Sbjct: 329 LIKAIKNNLENKEQTLLFLNRRGYAPLMLCKSCGHKFTCKYCSSWMVVHKSSKKLECHHC 388 Query: 467 DSQRPVPRQCPSC-GSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQL 525 Q + CP C L G G E++E+ LFP I+ I +D + Q L Sbjct: 389 GYQSKIFNSCPECLEDESLAICGPGIERIEEEAKTLFPNSKIAVISKDHVKNPEKIAQLL 448 Query: 526 AEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRA 585 ++ ILIGTQM+ KG+HFP++TLV ++D D AD RS+ER QL QV GRA Sbjct: 449 HQMENLEIDILIGTQMITKGYHFPNLTLVGVVDADLGSNHADLRSSERAFQLLHQVGGRA 508 Query: 586 GRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHN 645 GR +G V LQ+++P++ + + + D F L R+ +PP++ V N Sbjct: 509 GRGNSKGMVYLQSYYPDNIIFSYIKDEREDNFFVNELEVRKAADMPPFSKMASVILSGTN 568 Query: 646 NQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 + + + + ++ +LGP +L K G++R++IL+ + LQ + Sbjct: 569 EHKILEVAKNMVRIAPEA-----QVKILGPASSLMSKLAGKYRFRILIIADKKFNLQKYL 623 Query: 706 NGTLALINTIPDSRKVKWVLDVDP 729 L LI +D+DP Sbjct: 624 KFWLELI---KIPSFCHIKIDIDP 644 Score = 96.9 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M +A + L DYL+PE +++ G V VPF + +E GIV S+ E+ +L Sbjct: 1 MQIAKILLSAVKLFPLDYLIPEDLSLNIGDLVVVPF-RNKELTGIVWEFSNVPEVK--KL 57 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 K + E + T V L+ W ++YY +G + LP+ + + Sbjct: 58 KTIKEKVPLNLTITSEVLDLIKWMSNYYMAELGSIAKLVLPVDIAEKPIKVKEQK 112 >UniRef50_Q2RK26 Replication restart DNA helicase PriA n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RK26_MOOTA Length = 821 Score = 613 bits (1581), Expect = e-174, Method: Composition-based stats. Identities = 228/644 (35%), Positives = 328/644 (50%), Gaps = 27/644 (4%) Query: 106 QGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAAL 165 + ++ A +R+P+Q + L AL +G AL Sbjct: 185 WRQAPGVRRPYWAVPRPGAAAALAGMERRAPRQARILRALLEGGPRPAADLAAGNGYTAL 244 Query: 166 QALRKKGLCDLASETPEFSD--WRTNYAVSGE-------------RLRLNTEQATAVGAI 210 + L + GL +L P ++ + + E L+LN +Q A+ AI Sbjct: 245 RRLEEMGLIELTLGPPAGAEGMPPSRFEGGSEEYGNHGGAGGGVAPLQLNRDQEEALRAI 304 Query: 211 HSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFN 270 A +LL GVTGSGKTEVYL LA+G++AL +VPE L PQ +AR R+ Sbjct: 305 EGALSQGGTFLLYGVTGSGKTEVYLRATRAALARGRRALFLVPEHSLIPQVVARLRQAVG 364 Query: 271 APVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQ 330 V V+H L+ ER + W +A+ GE ++ G+RSALF P +LG+I++DEEH SYKQ Sbjct: 365 DGVAVIHGNLSPGERAAIWERARRGEIRVIAGSRSALFAPLPDLGLIIVDEEHAGSYKQD 424 Query: 331 EGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQH 390 RY AR++A+ R H E ++LGSATP+ ET ++ LL+L RR N Sbjct: 425 AAPRYDAREVAIKRGHLEGAVVVLGSATPSTETFYLARRGAINLLQLPRRVENLSLPAVE 484 Query: 391 VLDLKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPR 447 ++DL+ + Q L+ L + L A Q ILFLNRRG+AP +LC CG++ C Sbjct: 485 IVDLREEFRAGHQGYLSRRLRQEVAAALAAGRQAILFLNRRGYAPHVLCRRCGYVPLCRH 544 Query: 448 CDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPI 507 CD T HQ LRCH+C P CP+CG LV +G GT+++E L+PG I Sbjct: 545 CDVALTYHQ-DGTLRCHYCGRGEPARANCPACGG-SLVRLGAGTQRVEAEARALWPGTRI 602 Query: 508 SRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSAD 567 R D DTT+RKG E+ G A IL+GTQ +A+G FP VTLV +++ D +L+ D Sbjct: 603 IRADGDTTARKGRWEEIYRTFAGGHADILVGTQTIARGMDFPGVTLVGVVNADLSLYQPD 662 Query: 568 FRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRM 627 FR+ ER QL TQVAGRAGR G+V++QT++P P + + Y F EQ +A RR Sbjct: 663 FRARERTFQLLTQVAGRAGRKS-AGKVIIQTYNPADPAITLAAAQDYRRFYEQEIAGRRA 721 Query: 628 MQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRW 687 PP+ V V + L I + ++ VLGP P + + Sbjct: 722 GGYPPFVKLVRVGFSGRDEAGVIEAAHDLAGSIKGAGA---QIEVLGPAPGFPVRVQDNY 778 Query: 688 RWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 RWQ++L+ P+ R + + G LA ++ ++DV P+ Sbjct: 779 RWQLVLKVPAWSRNKARLAGCLANYRPR---HDIRMIVDVGPVN 819 Score = 82.3 bits (202), Expect = 6e-14, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 78/242 (32%), Gaps = 28/242 (11%) Query: 3 VAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 + VA+ P + +T Y +P M V+ G V V GKQ G+VV + + Sbjct: 5 LVEVAVNSAPGAIDKTLTYRVPPEMAAGVRVGSLVLVTVGKQMA-TGLVVDLQGGTGHSS 63 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL---RQGRPAANAP 114 LK + +VL+++ + L + A+ Y P+ L LP + R Sbjct: 64 --LKDIRDVLEAD-FLPPHLVELGRYMAERYFCPLAVALSAMLPPATGRRLERRWRWVPT 120 Query: 115 MWYWFATEQGQAVDLNSLKRS------------PKQQQALAALRQGKIWRDQVATLEFND 162 A A L S R+ Q + A R+ +AT Sbjct: 121 SGEETAAALNLAGYLPSPARAVAAYLAEVAVAGESQLRPFARGRELAGALKILATHGLIR 180 Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 + G+ P + R QA + A+ +A L Sbjct: 181 EEWNWRQAPGVRRPYWAVPRPGAAAALAGMERRAPR----QARILRALLEGGPRPAADLA 236 Query: 223 AG 224 AG Sbjct: 237 AG 238 >UniRef50_Q311S8 Replication restart DNA helicase PriA n=9 Tax=Desulfovibrio RepID=Q311S8_DESDG Length = 823 Score = 613 bits (1580), Expect = e-173, Method: Composition-based stats. Identities = 237/799 (29%), Positives = 366/799 (45%), Gaps = 72/799 (9%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFG-KQQERIGIVVSVSDASE-- 54 + + V+L P T Y LPE + + AG RV VP G + R G++ + A + Sbjct: 27 LRIVSVSLMAPPYTTLHYRLPEWLPEEMWCAGLRVAVPLGARGTLRAGVIAACGCAPDTV 86 Query: 55 LPLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG------- 107 ELKAV+ L+ P+ ++ A P G +L LP LR Sbjct: 87 PQGVELKAVLWPLEFVPLLGEEYLEMVRQLAVRQMVPPGQILGMLLPAGLRSAGVRLRVR 146 Query: 108 ------------------------RPAANAPMWYWFATEQGQAVD----------LNSLK 133 +A E +A + Sbjct: 147 AGGRPRTLRLRDIAKMADSERHVLASHWSAGRVEVLEPETDEAENDICHVTADPPWPVRP 206 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFN---DAALQALRKKGLCDLASETPE-------- 182 + +Q + L L + + + L L ++GL + E Sbjct: 207 AARRQTEVLEYLWENGPVSRRRMLHDLGTGAQTPLLTLAERGLVHVGPLDAEQAEVCGCG 266 Query: 183 FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLEN 240 A + L Q A+ A A ++ LL G+TGSGKT VYL + Sbjct: 267 IDSACHTEAFENQLFELTDAQQAALRACTDAVESDSAETRLLFGITGSGKTAVYLELARA 326 Query: 241 VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL-HSGLNDSERLSAWL----KAKNG 295 L +G +++ PE+ L + + RF VL H + ER +L +A+ G Sbjct: 327 CLEKGLSVMLLAPEVALACKLYRDVQLRFPGLPAVLYHGYQSAHEREQQFLNLAAQAREG 386 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 ++ GTRSALF P +LG +V+DEEHD+S+KQ E Y A+++A +R + ++LG Sbjct: 387 RPVLIAGTRSALFLPVASLGAVVLDEEHDASFKQDERLSYQAKEVAWFRVAQSKGALVLG 446 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQ-AGLAPALITRMRQH 414 SATP ++T V++ + L+ R G ++++K V+ LAP +TR+++ Sbjct: 447 SATPDVKTFHAVREGHMPGIVLSERVGGGTLPAVELVNIKDNAVKETILAPQTLTRIKET 506 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 + Q ++ LNRRG+AP + C DCG +A CP C+ T H+ + L CH+C P P Sbjct: 507 VTRGEQAVILLNRRGYAPLMYCLDCGSVARCPECEIGLTYHKGRERLVCHYCGHSVPFPS 566 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 C C H +P+G GTE+LE+TL+ + P G + R+DRD+T R G +EQ LA R + Sbjct: 567 PCAKCRGVHYLPMGEGTEKLEETLSTMLPHGKKVLRLDRDSTRRPGRMEQILAAFAREES 626 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 IL+GTQML+KGHHFP VTL + D D L D+R+ ER QL Q AGRAGR + G Sbjct: 627 SILVGTQMLSKGHHFPSVTLAVVADGDIGLNMPDYRATERTFQLLVQAAGRAGRGERPGS 686 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDH-NNQHAPLF 652 V++QT P H + Y+ F E+ L RR + PP+ ++R + Sbjct: 687 VIIQTRDPAHYCWDYIRNCDYEGFFEKELEARRKRRYPPFVKLALIRLSYPMDWPQGQDR 746 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + L + + +S + + VLGP PA P GR R+Q LL+ ++ + + Sbjct: 747 VNALASAVRASGR-ELGVSVLGPAPAPLPVLRGRRRFQCLLKASDWKTIRMLFHAAR--- 802 Query: 713 NTIPDSRKVKWVLDVDPIE 731 +P S +++ LD+DP+ Sbjct: 803 QGVPASSRLRLSLDLDPVN 821 >UniRef50_A9AWH7 Primosomal protein N' n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AWH7_HERA2 Length = 829 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 219/666 (32%), Positives = 319/666 (47%), Gaps = 45/666 (6%) Query: 98 HALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRD---- 153 L A W T A L L ++P+ A+ + + + Sbjct: 173 LIALGSLVSRPAAKPKREWSAQPTSATPAEALAELSKAPRLAAIFQAILEQAVDGEPVLL 232 Query: 154 -QVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 ++ + + + L++L + L L L EQ I + Sbjct: 233 PELRDVGASLSHLRSLALRNLIQLEQIEVRRDPLLGRIPPLEFPPELTLEQERGWRQIVA 292 Query: 213 AAD------TFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFR 266 A D LL GVTGSGKTE+YL + L G QALV+VPEI LT Q + RF Sbjct: 293 AQDTASRTGKAKPILLHGVTGSGKTELYLRAIGRALRNGGQALVLVPEIALTTQLVRRFA 352 Query: 267 ERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSS 326 RF + VLHS L+ ER W + + G+A + IG+RSA+++P L +I++DEEH+ S Sbjct: 353 ARFPQQLAVLHSELSVGERYDEWRRLRRGDAQVAIGSRSAIWSPMSKLQLIIVDEEHEHS 412 Query: 327 YKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNA-- 384 +K + YHARDLAV A +ILGSATP+LET VQ KY +L L R G Sbjct: 413 FKHEATPYYHARDLAVKLAELAGAVLILGSATPSLETAYAVQINKYEVLELHERVGRKTV 472 Query: 385 ---------RPAIQHVLDLKGQK---VQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 ++D++ + V++ + L + +++ L Q ILFLNRRG A Sbjct: 473 AGVTKADPIPMPPVQIVDMRSELKAGVRSMFSRPLQSAIQRTLDKREQTILFLNRRGIAS 532 Query: 433 ALLCHDCGWIAECPRCDHYYTLH------QAQHHLRCHHCDSQRPVPRQCPSCGSTHLVP 486 ++C DCG +CPRC +H A LRCH+C VPR CPSC ST + Sbjct: 533 FVMCRDCGTTIQCPRCAVALAVHATAGDAAAPATLRCHYCGHVDWVPRNCPSCFSTRIRD 592 Query: 487 VGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGH 546 G+GT+++ + + L+P + R DRD T RKG+ E L + + A IL+GTQM+AKG Sbjct: 593 FGVGTQRVVEEVKLLYPQARVMRWDRDVTGRKGSHEALLNQFTQHEADILVGTQMVAKGF 652 Query: 547 HFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLL 606 P VTLV ++ D AL DFRS ER QL QVAGRAGR G+V++Q+++PEH + Sbjct: 653 DLPLVTLVGVITADTALNLPDFRSGERTFQLLAQVAGRAGRRAGGGQVIIQSYNPEHYAI 712 Query: 607 QTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL--RNLILSSP 664 Q Y F + +A RR PP++ + + +N+ ++Q + Sbjct: 713 QAAAQHDYRQFYREEIAFRRTAHYPPFSRLIRFMTQSPSNKTVERVVRQFDTQLREELER 772 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 ++GP PA K +RW IL++ P L ++ + W Sbjct: 773 RRIRDWAIIGPSPAFLQKVRDLYRWHILVRLPDPTDL----------LHDLKIPSG--WT 820 Query: 725 LDVDPI 730 +DVDP+ Sbjct: 821 IDVDPV 826 Score = 70.7 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 76/235 (32%), Gaps = 19/235 (8%) Query: 3 VAHVALPVPLPR----TFDYLLPEGM-TVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 A VAL LP Y +P + ++ G V VP G ++ + G+V+ S Sbjct: 2 YAQVALNAYLPDNPEAILTYAVPPHLRPLRVGALVWVPLGPRRVQ-GVVLEFSTQRPQ-G 59 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQG-----RPAAN 112 ++ ++E D E + + L W + + D + +P ++Q RP + Sbjct: 60 FVVRDILEHADPEAIAAPAQLALAQWFSQSQAVRLWDAVQLTMPPGVKQEIERTWRPTEH 119 Query: 113 APMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 ++ + L L+R +Q + LR D + + + L G Sbjct: 120 GQKIELGTLDERERAILFHLRRVGEQSER--QLRVDLRGSDADLRRSYTELHERGLIALG 177 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRL-----NTEQATAVGAIHSAADTFSAWLL 222 +W + L A AI A LL Sbjct: 178 SLVSRPAAKPKREWSAQPTSATPAEALAELSKAPRLAAIFQAILEQAVDGEPVLL 232 >UniRef50_B3QZW7 Primosome assembly protein n=1 Tax=Candidatus Phytoplasma mali AT RepID=B3QZW7_PHYMT Length = 785 Score = 611 bits (1577), Expect = e-173, Method: Composition-based stats. Identities = 211/771 (27%), Positives = 360/771 (46%), Gaps = 75/771 (9%) Query: 3 VAHVALPVPL----PRTFDYLLPEGM--TVKAGCRVRVPFG-KQQERIGIVVSVSDASEL 55 +A V + + R FDY++PE ++ G RV VPFG K +R+G V + + S+ Sbjct: 2 IAQVVIDLKAFTLRNRHFDYIIPEKFHGMIQKGMRVIVPFGLKDNKRLGYVCDLVNYSDF 61 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI------------- 102 K ++EVLD EP ++ L V +P Sbjct: 62 AK---KELLEVLDLEPCIDPELFLLAEEILKIPFISKALVYETVIPKGLLINYQKKVLLF 118 Query: 103 ---LLRQGRPAANAPMWYWFATEQGQAVDLNSL-----------------KRSPKQQQAL 142 + + W + L R ++++ Sbjct: 119 NKKGISEEIIQKFNNKNEWLLNDSEYKKFGVELNKLACKLDILKIQTLLKPRYSEKKETF 178 Query: 143 AALRQGKIWRDQVATLEFND-----------------------AALQALRKKGLCDLASE 179 Q+ A + L KKG+ + Sbjct: 179 YYFNPICKDYHQIQLNPKEKHVIEQFKTTLNIKKIDFLKFSTYAVINNLLKKGIILKYEK 238 Query: 180 TPEFSDWRTNYAVSG-ERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 N+++S +++ LN EQ A+G I + +LL G TG+GKTEVYL ++ Sbjct: 239 NLNDFILHHNFSLSKNKKVTLNQEQEEALGQI--DLNKNKVYLLYGKTGTGKTEVYLKLI 296 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 E +L +Q L++VPEI L R + +F + ++HS L+ ER + + KN EA Sbjct: 297 EKILKNKRQVLILVPEIILIAPLAQRLKSKFTEEKISIMHSLLSSKERYNQYKMIKNQEA 356 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSA 357 I++GTRSA+F+P ++LG+I+IDEEHD S+ Q+E Y ++LA R +P+ILGSA Sbjct: 357 TIILGTRSAIFSPLQSLGIIIIDEEHDESFIQKEQVSYDVKELAKIRTKYHNVPLILGSA 416 Query: 358 TPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQH 414 TP+LE+ NVQQ Y+LL L +R + ++D+K + + + L ++ + Sbjct: 417 TPSLESHYNVQQNIYKLLTLNQRILVNNFPLIKLVDMKKELTKGNLEPFSFELKKKLNET 476 Query: 415 LQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPR 474 L+ + Q I+F+N +G+AP LLC CG++ +C C+ T ++ ++ L+C+HC Sbjct: 477 LKKNEQAIIFINTKGYAPFLLCRFCGYVPKCIECNISLTFYKKKNLLKCNHCGFSLKFKL 536 Query: 475 QCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 CP C + G+G E LE L FP + I R D DT ++ E E ++ + Sbjct: 537 ICPKCNQKKIKTFGIGIEYLENYLKQNFPTITIKRSDADTITKISQYENIWNEFNQNKYQ 596 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEV 594 IL+GTQ+++KG F +VTLV ++ D L DF+++E+ QL Q +GRAGRA KQG V Sbjct: 597 ILLGTQIISKGLDFSNVTLVGIIAADSLLKIPDFKASEKTFQLLMQTSGRAGRA-KQGTV 655 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 ++Q++ ++ +++++ ++ L ER++ QLPP+ + + + Sbjct: 656 IIQSYDIDNYVIKSVASYQEKYVVQKLLDERKISQLPPFNYVSKILICHESYLQVFSISK 715 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHII 705 ++ ++ E + +LGP+ +L K+ ++R + L++ I Sbjct: 716 NIKYILEQKYNKKEMI-ILGPILSLISKKNNKYRILLTLKYSKWPLNLDFI 765 >UniRef50_Q7V699 Primosomal protein N' (Replication factor Y) n=18 Tax=Cyanobacteria RepID=Q7V699_PROMM Length = 768 Score = 611 bits (1576), Expect = e-173, Method: Composition-based stats. Identities = 241/743 (32%), Positives = 354/743 (47%), Gaps = 33/743 (4%) Query: 14 RTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVS----------DASELPLNELKAV 63 R F Y+ + V G V V ++ G+V+ SE P L+A+ Sbjct: 33 RCFTYVDSRRLGVDLGDLVVVRLRGRRMH-GLVMDRRISSPVDRGQDSGSEAPPRHLEAI 91 Query: 64 VEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI-LLRQGRPAANAPMWYWFATE 122 ++ S V + + A + H +L ALP L Q + P W+ Sbjct: 92 EALVQSAAV-DPLWFGWIEAMAVHCHISSFRMLKAALPPGWLGQRQSHQAEPRRLWWIQL 150 Query: 123 QGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPE 182 + A++ +L + QA A G W+ + F + L K+GL P Sbjct: 151 ESSAINPQNLPQRQADLQAALAAGGGGAWQRDLQAAGFGSGLVNGLIKRGLIRREKRQPT 210 Query: 183 FSDWRTNYAVSGE-----RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + + + + L EQ V A S + LL GVTGSGKTEVYL + Sbjct: 211 DASNGLSCSDACDQDLEVPQSLTVEQQEVVEAFQSQ-PLGTGMLLWGVTGSGKTEVYLQL 269 Query: 238 LENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL-KAKNGE 296 L G+ L++ PEIGL PQ + RFR RF V HSG +D ER+S W Sbjct: 270 AARELQAGRHCLILTPEIGLIPQLVDRFRRRFGTKVLEYHSGCSDRERVSTWRQGLTAAT 329 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILG 355 +V+GTRSA+F P LG+IV+DEEHDSSYKQ+ YHARD+A+ RA ++LG Sbjct: 330 PLVVVGTRSAVFLPLAPLGLIVLDEEHDSSYKQESPMPCYHARDMAMDRARRTGARVVLG 389 Query: 356 SATPALETLCN-VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRM 411 SATP+L + N Q + L RLTRR + HV+D++ + ++ L+ R+ Sbjct: 390 SATPSLVSWKNLAPQGQLALARLTRRISDQPLPPVHVVDMRQELADGHRRLISRPLMERL 449 Query: 412 RQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ---AQHHLRCHHCDS 468 +A Q ++ + RRG++ L C CG + +CP CD T+H+ LRCH CD Sbjct: 450 SALPEAGEQAVVLVPRRGYSSFLSCRSCGEVVQCPNCDVALTVHRSRQGHQWLRCHWCDH 509 Query: 469 QRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEV 528 + V C CGS P G GT+++ + L G+ + R DRD+T+ + + L + Sbjct: 510 RAEVMSSCHKCGSKAFKPFGAGTQRVMEHLVEELQGLRLLRFDRDSTAGRDGHRRLLEQF 569 Query: 529 HRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRA 588 G A +L+GTQMLAKG P VTL A+L DG L D ++ E+ QL Q+AGRAGR Sbjct: 570 AAGEADVLVGTQMLAKGMDLPRVTLAAVLAADGLLHRPDLQAGEQSLQLLMQLAGRAGRG 629 Query: 589 GKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQH 648 + G V++QT+ P+HP++ L+ Y F ++ R L P++ ++R + Sbjct: 630 ERPGHVLVQTYCPDHPVIHHLVDGRYGEFLKEEACLRHEAGLVPYSRACLLRLSGDSAAV 689 Query: 649 APLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGT 708 L I + ++GP PA + GR RWQ+LL P RL + Sbjct: 690 TATAAAVLAEQI-KPLCEAQGWCLVGPAPAPIARVAGRSRWQLLLHGPEESRLP--LPSG 746 Query: 709 LALINTIPDSRKVKWVLDVDPIE 731 L N +P R V +D DPI+ Sbjct: 747 STLWNGLP--RGVSLAVDPDPIQ 767 >UniRef50_A9BI18 Primosomal protein N' n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BI18_PETMO Length = 764 Score = 610 bits (1573), Expect = e-173, Method: Composition-based stats. Identities = 216/781 (27%), Positives = 344/781 (44%), Gaps = 74/781 (9%) Query: 1 MPVAHVALPVPLPRT----FDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 M V P+ + F Y ++ G RV + + + G+V S+ +E Sbjct: 1 MYYYEVI---PIGQMVFNGFTYK--SDKKLEIGQRVIIDL-RGKFLPGLVYKESETTEFD 54 Query: 57 LNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI-------------- 102 ++K + LD++ +L+ + + PIG+V P Sbjct: 55 --KIKEIAFPLDNKSFLNEKHIKLMEKVSSKFMAPIGEVARLFFPPLSSDIYKLRITPKS 112 Query: 103 --------------------LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRS---PKQQ 139 + + E + + + Sbjct: 113 SFSPIQKPIFYKQFLKSFDNASKANKQLREYLDSNLIEIELYRKEITKKIDKFVSLKMDL 172 Query: 140 QALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLR- 198 + + K R+ + L N L++ T + W+ E Sbjct: 173 KEMWKFNVSKSAREVINYLSINGETLESDLYSQGILKKGSTVLNTLWKKGIIELSEGFPI 232 Query: 199 --------LNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 LN EQ AV AI + +D LL GVTGSGKTEV+ V +L G + L+ Sbjct: 233 YEENTEISLNDEQRQAVEAIKANSDKP--HLLYGVTGSGKTEVFFEVARPILENGGKVLL 290 Query: 251 MVPEIGLTPQTIARFRERF-NAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFT 309 +VPEI LT + + R ++RF N HSGL SER+ W KA NGE +VIGTRSA+F Sbjct: 291 LVPEISLTSELMIRLKKRFANYNAAFYHSGLTSSERVQTWYKAVNGELDLVIGTRSAIFI 350 Query: 310 PFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQ 369 P K+L +I+IDEEHD SY Q E Y A D A +R E I +IL SATP + L + Sbjct: 351 PMKDLKMIIIDEEHDQSYYQIENVSYDAIDTACFRKDLEDIQLILSSATPRVIDLYKAKA 410 Query: 370 KKYRLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPALITRMRQHLQADNQVILFLNRR 428 + L ++ R ++D+ K +K + ++ + L+ + +VI+F R Sbjct: 411 NFFYLEKIHTRYF-TEMPEVQIVDMKKDEKYNWIFSKKVVENIEISLKKNKKVIVFTPTR 469 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+A ++C DCG+I +C CD T H+ + LRCH+C + +P CP CG L G Sbjct: 470 GYANYVICSDCGYIFKCDECDVSLTFHKNERKLRCHYCGKESELPNFCPKCGGFKLQTRG 529 Query: 489 LGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHF 548 GTE++ LA LFP P+ R+DR L + G +I++GT+M+ KG Sbjct: 530 FGTERVMAELAKLFPSQPLVRVDRTVIKTFKDLRNTFNFMKEPGKKIVVGTKMITKGLDI 589 Query: 549 PDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQT 608 D+ LV +LD D D+ + E A L QVAGR+GR K G+V++Q+ PE+ + ++ Sbjct: 590 QDLDLVVILDADRYFNFPDYNAQESTASLLMQVAGRSGRKEK-GKVIIQSFQPENHIYKS 648 Query: 609 LLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE 668 L+ +D AE L +R++ PP+ + ++ + + A ++ + S Sbjct: 649 LIDHNFDLIAENDLEQRKIYGYPPFVTLFMILVNNPSADKAKAKANEIVEEL-SKIENQV 707 Query: 669 KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVD 728 + +LGPV + K G +R+QI+++ + + TL R +K V+ Sbjct: 708 DIEILGPVVPIISKLRGNYRYQIIIKSKQKN--HDFLYSTLK-----KHFRDIKIY--VN 758 Query: 729 P 729 P Sbjct: 759 P 759 >UniRef50_B1X5Q1 Primosomal protein N' (Replication factor Y) n=2 Tax=cellular organisms RepID=B1X5Q1_PAUCH Length = 752 Score = 606 bits (1562), Expect = e-171, Method: Composition-based stats. Identities = 223/750 (29%), Positives = 352/750 (46%), Gaps = 31/750 (4%) Query: 2 PVAHVAL-PVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDA--SELPLN 58 P + + P + F Y + + +K G VRV K+ RIG+ + SEL Sbjct: 11 PFFDIWIEAGPEGKIFTYKNTDRIAIKVGDFVRVRL-KRASRIGLTIKSRTKIPSELKFR 69 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPIL-----LRQGRPAANA 113 L+++ + + + + L + YYH +L A P +G+ + Sbjct: 70 HLESIESIFEIN-FIDPNWYSWLYEISIYYHTDFFKILKTAFPWNWSKDDYIKGKTSPLT 128 Query: 114 PMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGL 173 + TE+ R + L + + F+ + L AL KK + Sbjct: 129 EAFINLVTERPIDRKAFLTNRQIELINYLRTKSIKNCTSNLLKRQGFSLSTLNALTKKNV 188 Query: 174 CDLASETPEFSDWRTNYAVSGERL---RLNTEQATAVGAIHSAADTFSAWLLAGVTGSGK 230 + + + ++N+ S + +TEQ A LL GVTGSGK Sbjct: 189 IQINLNSNQIIKEKSNWLDSKIKYLRKIFSTEQYIAFRTFEE-IGQDKPLLLWGVTGSGK 247 Query: 231 TEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWL 290 T +YL L +G L++ PEIGL PQ + R +E + HSG + ++R++ W Sbjct: 248 TAIYLQAAAEQLKKGLSVLLLAPEIGLIPQLVDRCQEYLGLEILEYHSGCSKADRITVWR 307 Query: 291 KAKN--GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHS 347 + +V+GTRSA+F P LG+I++DEEHDSSYKQ+ Y++RD+A+ R Sbjct: 308 HCYSFASAPTVVVGTRSAVFLPLNPLGLIILDEEHDSSYKQESPMPCYNSRDIALIRRKY 367 Query: 348 EQIPIILGSATPALETLCNVQ-QKKYRLLRLTRRAGNARPAIQHVLDLK---GQKVQAGL 403 ++ +ILGSATP+LET + +KK L RL++R + V+D++ + + Sbjct: 368 HKMKVILGSATPSLETWRSCYGKKKITLARLSKRISGQKLPSVKVVDMRLEFSEGQKGLF 427 Query: 404 APALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQ---AQHH 460 + LI ++R + Q I+ + RRG + + C CG + CP CD T+H+ + Sbjct: 428 SRLLIEKLRTLKISGEQAIILVPRRGHSSFMSCRSCGEVMICPNCDVSLTVHKNEEGNNW 487 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 LRCH CD + V +C +CGS+ G GT+++ + L + + + R DRDTT Sbjct: 488 LRCHWCDYRSKVAPKCGNCGSSAFKSFGTGTQRVVEGLHQVIENLTLMRFDRDTTPGHNG 547 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 L E +G A +L+GTQML+KG P+VTL +L DG L D RSAE QL Q Sbjct: 548 HRNLLNEFSKGKADVLVGTQMLSKGIDLPNVTLSVVLAADGLLHKPDLRSAEHCLQLLLQ 607 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 +AGR+GR + GE+++QT+ P+HP++ L Y+ F + L+ R+ + P+ ++ Sbjct: 608 LAGRSGRGERLGEILVQTYCPDHPVIHHLSDGTYENFLIKELSSRKSFGMAPYNRVCLLS 667 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 N L + I SS ++GP PA + G RWQILLQ Sbjct: 668 ISGVCNLSTSRTAIILASRI-SSVCEKMGWKLVGPTPAT--RIAGLSRWQILLQGSEYSS 724 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPI 730 L I L + V+ +D DPI Sbjct: 725 LSFIKEFQL----NENIEKGVQLSIDPDPI 750 >UniRef50_B9L0C0 Primosomal protein N' n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0C0_THERP Length = 812 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 233/822 (28%), Positives = 352/822 (42%), Gaps = 110/822 (13%) Query: 2 PVAHVAL---PVPLPRTFDYLLPEGMT--VKAGCRVRVPFGKQQERIGIVVSVSDASELP 56 A + L P Y +P + ++ V VP + + R+G+V S+ + + P Sbjct: 5 RYADIVLELEPGERRPLLTYGVPAELADRIRLYQAVWVPL-RDEVRLGVVASLHEEA--P 61 Query: 57 LNELKAVVEVLDSEPVF------------------------------------------- 73 ++ VV V++ E V Sbjct: 62 AFAVRPVVGVVEPEFVLTPEQWALAEWLVEETLCTLWEAVALFLPPRLAQRVEVLLRPTG 121 Query: 74 -------THSVWRLLLWAADYYHHPIGDV-----------LFHALPILLRQGRPAANAPM 115 + RLL A + L A+ L + P Sbjct: 122 AVPTGRLSPVQRRLLDLLAQRGPLTLEQAQRALGRSLTTALERAVSTGLIERLPIVRPIQ 181 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQ------QALAALRQGKIWRDQVATLEFNDAALQALR 169 +D + + + + + + R + L + A +Q L Sbjct: 182 RVVSEQFLRPRLDSDPPTDAAQGRAYEIIRRWYEEHDGALLPRRFLHRLGLSPATVQMLV 241 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTG 227 ++GL ++ T L L EQ A AI S D LL GVTG Sbjct: 242 QRGLVEVVE--LPRGGLPTVQGGPDRPLTLTPEQQQAWEAIRSMFDQDPPRPLLLHGVTG 299 Query: 228 SGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLS 287 SGKTE+YL + L +G+QA+V+VPEI L Q + R RF ++HSGL +SER + Sbjct: 300 SGKTELYLRAIGECLRRGRQAIVLVPEIALATQVVQRVAARFPGRTVLVHSGLRESERSA 359 Query: 288 AWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW-RYHARDLAVYRAH 346 W G+AA+V+G RSALF P +++G+IVIDEEH+++YKQQE RYHAR +A A Sbjct: 360 VWEAIHQGQAAVVVGPRSALFVPLRSIGLIVIDEEHEAAYKQQEPPPRYHARAVAQRLAE 419 Query: 347 SEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-------------NARPAIQHVLD 393 + ++LGSATP + T + + RL +R G + V+D Sbjct: 420 LHRAVLLLGSATPDVTTAYAAATSQLAVARLRQRVGPLVVGERGEVARARLQLPRVEVVD 479 Query: 394 LKGQ---KVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH 450 ++ + + AL + LQ QV+L +NRRG A + C CG + CP CD Sbjct: 480 MRLEHQLGHAGLFSRALHEAIAAALQRGQQVLLLINRRGSATLVQCRSCGHVEVCPLCDV 539 Query: 451 YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRI 510 H + L CH CD +R CP+CG L G GT+++E+ + FP + R Sbjct: 540 PLVYHADRRQLICHRCDLRRLPSTTCPTCGRPALSYYGAGTQRVEREVQQRFPQARVLRW 599 Query: 511 DRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRS 570 DRD R L V R +++GTQM+AKG FP VT V ++ D ++ D+R+ Sbjct: 600 DRDVVQRGNDPRSLLQRVLRREVDVIVGTQMVAKGLDFPAVTTVGIVHADTGIYLPDYRA 659 Query: 571 AERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQL 630 AER QL TQVAGRAGR G VV+QT+ PEH ++ + YDAF ++ LA R+ Sbjct: 660 AERTFQLLTQVAGRAGRHLPGGLVVIQTYTPEHYAIRAASRQDYDAFYQEELAFRQRHGY 719 Query: 631 PPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADE--KLWVLGPVPALAPKRGGRWR 688 PP+ V + + L +++ + + VLGP PA + G ++ Sbjct: 720 PPFRRLVRLVVRHRDELAGRLASEEMAERLREKARELSARDVEVLGPTPAFVSRIRGLYQ 779 Query: 689 WQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 WQ+L++ R+ I W++DVDP+ Sbjct: 780 WQLLVRGADGPRVVAAI------------PVHGGWIVDVDPV 809 >UniRef50_A2SC06 Replication restart DNA helicase PriA n=10 Tax=Burkholderiales RepID=A2SC06_METPP Length = 715 Score = 602 bits (1553), Expect = e-170, Method: Composition-based stats. Identities = 261/751 (34%), Positives = 363/751 (48%), Gaps = 90/751 (11%) Query: 3 VAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASE---L 55 V V + P L YL + G +RVP G++ E +G+ + Sbjct: 30 VVPVVIDAPQYSGLKAALGYL--SERPLTPGTLLRVPLGRR-EVLGVAWDTRSGEDSAVP 86 Query: 56 PLNELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPM 115 L+ V V D ALP L R + Sbjct: 87 DGVTLREVAAVFD------------------------------ALPPLPAAWRELVDFAA 116 Query: 116 WYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCD 175 Y+ + A+ + + L ++ L Sbjct: 117 SYYQRSPGEVALAVLPPELRMLSATQL---------------------------ERRLTR 149 Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 L ++ S + G + EQA + A+ ++A LL G TGSGKTE+YL Sbjct: 150 LRAKLLPPSGAQ------GALPAPSAEQAQVLQALAASAGDAPVTLLHGSTGSGKTEIYL 203 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAP-VEVLHSGLNDSERLSAWLKAKN 294 + V+ G+QALV+VPEI LTPQ RF RF V LHSGL + RL WL Sbjct: 204 REAQRVVEAGRQALVLVPEINLTPQLEERFLARFPGRRVVSLHSGLTPARRLKHWLMVLL 263 Query: 295 GEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIIL 354 GEA +V+GTR A+F P LG++++DEEHD SYKQQEG RY ARDLAV R E +P++L Sbjct: 264 GEADLVLGTRLAVFAPLPRLGLVIVDEEHDPSYKQQEGARYSARDLAVVRGRVEGVPVLL 323 Query: 355 GSATPALETLCNVQ------QKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLA 404 GSATP+LE+ N +Y L + R G ++D+ K + L+ Sbjct: 324 GSATPSLESWHNALPATEGGAGRYTRLTMAARIGGGVLPTVRLVDMSRLPKEVLRDSALS 383 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 PAL+ +R+ L Q ++ LNRRG+AP L C +CGW + C C + H+ LRCH Sbjct: 384 PALLGALRERLARGEQSLVLLNRRGYAPVLHCTECGWKSACAHCSAWRVFHKLDRTLRCH 443 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQ 524 HC VPR CP CG+ + P G GTE+LE+ LA PG + RID DTT R GALE + Sbjct: 444 HCGLTERVPRACPDCGNADIQPTGRGTERLEEQLALALPGARVGRIDADTTRRSGALEAE 503 Query: 525 LAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGR 584 L+ VH G +L+GTQM+AKGH F +TLVA ++ D ALFS+DFR+ ER L Q AGR Sbjct: 504 LSRVHAGEVDVLVGTQMIAKGHDFRRMTLVAAVNPDAALFSSDFRAPERQFSLLMQAAGR 563 Query: 585 AGRAGKQ---GEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRA 641 AGRA +Q E+ +QT HP+H L L Y AFA+ LAERR LPP+T ++RA Sbjct: 564 AGRAAEQADRAEMWVQTWHPQHALYAALRTHDYAAFAQAQLAERRAAGLPPYTHLALLRA 623 Query: 642 EDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRL 701 + A +L+ + + ++ + PVP + R Q+L++ SR L Sbjct: 624 DAREQSVAQAWLRVVSDEARE-LAEQHQVALYPPVPLSVQRVADMERAQLLVESASRPAL 682 Query: 702 QHIINGTLALINTIPDSRK--VKWVLDVDPI 730 Q + A + +K ++W +DVDP+ Sbjct: 683 QRFLTAWDATLRRKRPEQKGLLRWAVDVDPL 713 >UniRef50_C0YIQ4 DNA replication factor Y n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YIQ4_9FLAO Length = 815 Score = 597 bits (1539), Expect = e-169, Method: Composition-based stats. Identities = 192/684 (28%), Positives = 326/684 (47%), Gaps = 40/684 (5%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ ++S + + A+ Y + + A + Sbjct: 155 KDIIRTINS--LIDLQYIEIDEKIAEKY-----------------KAKEVAYVRINDEVL 195 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWR--------DQVATLEFNDAALQALRKKG 172 Q L L R+ KQ+ + + + + F + + L KG Sbjct: 196 ANQNLTEILLKLNRAQKQKDLFLLILEKQTENPDTPIKKSELFEDGYFGSSHFKPLADKG 255 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 L + + + E L+ +Q TA I A + LL GVT SGKT Sbjct: 256 LVEEYYMQKDR--IESYEGEIEELEELSEQQKTAKSEIDEAFEEGKNVLLHGVTSSGKTH 313 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 +YL ++ + +GK L ++PEI LT Q R +++ + H L D ER+ W + Sbjct: 314 IYLEKIDECIKEGKNVLFLLPEISLTKQITQRLEKKYGRQLGFYHQKLTDFERVEVWRRI 373 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIP 351 K + I+IGTR+ALF P++NLG+IV+DEEHDS+Y+ +E ++A+D ++ + Sbjct: 374 KQNDIRILIGTRNALFLPYQNLGLIVVDEEHDSAYRPREVSPYFNAKDASLVLGKFYKAG 433 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG----QKVQAGLAPAL 407 +ILGSATP++E+ + ++ K + + L R GN +++ K +KV + L Sbjct: 434 VILGSATPSVESYYSARKDKMKYVFLNERFGNVNLPEYELINFKEAQESKKVSGNFSLKL 493 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I ++ + A NQ I+ NRRG++ + C CG++ C CD T H+A + ++CH+C Sbjct: 494 IEDIKTTVDAKNQAIVLHNRRGYSNVIECESCGYVNYCSNCDVVMTYHKAANEMKCHYCG 553 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + P+ CP C S L G+G EQ+ + ++ LFP + R+D D+ +K A E+ + Sbjct: 554 QRASKPKTCPKCNSEKLNERGVGVEQIHEEVSKLFPENEVDRMDVDSMRKKFAYEKLYEK 613 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + G I++GTQM++KG F + LVA+ D L+ DFR+ ER QL TQV+GRAGR Sbjct: 614 IEDGETDIIVGTQMISKGLDFDHIELVAIPKADSLLYVQDFRAEERAYQLITQVSGRAGR 673 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +G++++QT +P+H + Q + + L ER+ PP+T +++ + Sbjct: 674 VSGKGKILIQTFNPDHSVFQLIKMNNPAKIYKYILTERQKFHYPPFTKLIMIELKHRRED 733 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 A Q L +++ D VLGP A K +++QI+L+ P + + Sbjct: 734 KADRASQFLGSILRKYLPEDC---VLGPERAQIAKLNNLYQFQIMLKLPRGKTYEKFKSM 790 Query: 708 T---LALINTIPDSRKVKWVLDVD 728 L + I + +K + VD Sbjct: 791 VLISLKEFDEITAYQSIKKDVFVD 814 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 84/225 (37%), Gaps = 9/225 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 M A + LP+ L +F Y +PE M ++ G RV VPFG ++ GIV + D + Sbjct: 1 MQYAQIVLPLNLKGSFTYKVPEEMMPEIQPGMRVLVPFGGKKIYTGIVFELHDHAP-ENF 59 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 K ++ +LD +P+ W ++YY +G++ + P L+ Sbjct: 60 VAKEIISMLDDQPILPQEQIDFWNWLSEYYLCNLGEIYRFSFPSSLKLESETYLKLKAGA 119 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + V+ L ++ + +Q + + + + +L ++ Sbjct: 120 IVDFENLDVNEMYLIQALEVRQLINL-----TDIEAFIPKKDIIRTINSLIDLQYIEIDE 174 Query: 179 ETPE-FSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 + E + Y + + N + ++ A +LL Sbjct: 175 KIAEKYKAKEVAYVRINDEVLANQNLTEILLKLNRAQKQKDLFLL 219 >UniRef50_C6X4B4 Helicase PriA essential for oriC/DnaA-independent DNA replication n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X4B4_FLAB3 Length = 834 Score = 596 bits (1537), Expect = e-169, Method: Composition-based stats. Identities = 195/684 (28%), Positives = 335/684 (48%), Gaps = 40/684 (5%) Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K +V+ + + + + A+ Y + + A + + Sbjct: 174 KEIVKTI--KSLIDLQYIEIDEKIAEKY-----------------KAKEVAFLRIKDKES 214 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQV--------ATLEFNDAALQALRKKG 172 + A L SLKRSPKQQ+ L + + + +V F L+ L +KG Sbjct: 215 VNKRLAEVLLSLKRSPKQQELLLLILEKETEHPEVPIKKSVIFDEGNFAHTQLKTLIEKG 274 Query: 173 LCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTE 232 L + + T L Q A I A LL GVT SGKT Sbjct: 275 LVEEYLLQKDR--LATYEGQIEGLEELTESQQRAKTEIDDAFTNDKNVLLHGVTSSGKTH 332 Query: 233 VYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKA 292 +YL +E + G+ L ++PEI LT Q + R ++ + H L D ER+ W K Sbjct: 333 IYLDKIEETVLAGRNVLFLLPEISLTKQIVQRLERKYGRQLGFYHQKLTDFERVEVWRKV 392 Query: 293 KNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIP 351 +N E ++IGTR++LF PF+NL +IV+DEEHDS+YK +E ++A+D A A + Sbjct: 393 RNNEIKVLIGTRNSLFLPFQNLRLIVVDEEHDSAYKPREVSPFFNAKDAAQVLAKMYEGH 452 Query: 352 IILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQ----KVQAGLAPAL 407 +ILGSATP++E+ Q++K + + L R G+ + +++ K + K+ + L Sbjct: 453 LILGSATPSVESYYLAQKEKLQYVFLGERFGDVKLPEFELVNFKEEQDSKKIIGNFSVKL 512 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I ++ L+ + Q ++ NRRG++ + C CG++ C CD T H+ + ++CH+C Sbjct: 513 IDDIKSELERNKQTMILHNRRGYSNVVECESCGYVNYCANCDVVMTFHKYSNEMKCHYCG 572 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + P+ CP C S +L G+G EQ+ + ++ LFP + R+D D+ +K A E+ + Sbjct: 573 QKASKPKVCPKCHSENLNERGVGVEQIHEEVSRLFPDSEVDRMDVDSMRKKFAYEKLYEK 632 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + I++GTQM++KG F ++ LVA+ D L+ DFR+ ER QL TQV+GRAGR Sbjct: 633 IEESETDIVVGTQMISKGLDFDNIELVAIPKADSLLYVQDFRAEERAYQLITQVSGRAGR 692 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 +G+V++QT++P H + Q + + L ERR PP+ +++ + ++ Sbjct: 693 TSGEGKVIIQTYNPSHSVFQLIRDNDTASIYAHFLEERRKFLYPPFVKLIMIELKHRRDE 752 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHI 704 A Q L +++ + +LGP + K +++QI+L+ + + + Sbjct: 753 KASRSAQFLGSVLRKYLPEEC---ILGPEKSPIAKLNLMYQYQIMLKLPRGKRYLEFKAL 809 Query: 705 INGTLALINTIPDSRKVKWVLDVD 728 + +L ++ I + VK ++ VD Sbjct: 810 VLKSLEEMDEITAYQSVKKLIFVD 833 Score = 126 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 8/182 (4%) Query: 3 VAHVALPVPLPRTFDYLLPEGM--TVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 A + LP+ L TF Y +P+ + ++ G RV V F + GIV + E Sbjct: 22 FAQIILPLNLKGTFTYKVPDEIMPDIEVGMRVLVSFRGNKIYTGIVFEIH-KDEPEGFVP 80 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ +LD P+ R W ++YY G++ A P L+ Sbjct: 81 KEIISILDDFPILPPEQIRFWNWISEYYLCNPGEIYRFAFPASLKLESETYLKLKPNVTV 140 Query: 121 TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET 180 + V+ L ++ + +Q + + + +++L ++ + Sbjct: 141 EFENLDVNEMYLIQALEVRQLI-----NVTEIEAFIPKKEIVKTIKSLIDLQYIEIDEKI 195 Query: 181 PE 182 E Sbjct: 196 AE 197 >UniRef50_Q2GEJ5 Primosomal protein N' n=2 Tax=Neorickettsia RepID=Q2GEJ5_NEOSM Length = 709 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 214/736 (29%), Positives = 352/736 (47%), Gaps = 39/736 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 +V LP+PL F Y V G V+V F + ++ G+V SV SE +K Sbjct: 2 YLNVVLPLPLDSGFLYS-SGHFDVYVGSLVKVDF-RGRKITGLVTSVVPESEHE-YIIKE 58 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATE 122 ++ V P F+ + L W A Y +G VL AL + P + Sbjct: 59 ILAVEQVRP-FSSEYVQFLSWIAYYNFTKLGLVLRSAL---------VKDIPDSAAYILT 108 Query: 123 QGQAVDLNSLKRSPKQQQALAALR-QGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 +P + LA R I D + + +Q L G + + Sbjct: 109 NNNIERSC---LTPAVCRVLALFRGSQYITSDTLDAEKIQRKTVQKLIDIGAIERIHASV 165 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENV 241 + + L+ EQ+TA I + F+ +LL GVTGSGKT VYLS + Sbjct: 166 S-EIKALPEELKKLKFELSDEQSTAREKI--CMEGFTVYLLDGVTGSGKTLVYLSAALEI 222 Query: 242 LAQGK--QALVMVPEIGLTPQTIARFRERF--NAPVEVLHSGLNDSERLSAWLKAKNGEA 297 L + Q +++ EI L R ++ F + HS L+ + R W K +A Sbjct: 223 LQRDAAAQVIMLFSEIALASYIFERIKKSFLGMVEIVEWHSDLSPARRRKNWHKVVTNKA 282 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEG-WRYHARDLAVYRAHSEQIPIILGS 356 ++IG RSA+ P NL +IV+DEEHD S+KQ +G + Y+ARDLA+ R IP+IL S Sbjct: 283 RLIIGARSAILLPIPNLQMIVVDEEHDQSFKQDQGDFTYNARDLAIMRGKLFNIPVILSS 342 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKG-QKVQAGLAPALITRMRQHL 415 ATP+LE+ NVQ+K + L L RR G A+ V+D++ QKV ++ L + Sbjct: 343 ATPSLESYYNVQKKGFVHLTLERRFGGAQLPDVRVVDMRKAQKVSQHISHELYEELNCTF 402 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 + Q +LFLN+RG+A ++C CG +CP C + H+ + L CH C +RP+ + Sbjct: 403 DSGMQSLLFLNKRGYASIIICSSCGHRMKCPDCIAWLVEHKQNNTLLCHLCGFKRPMITK 462 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 C C S ++ G G E++ + + LFP + + DT + + ++ +G I Sbjct: 463 CEECSSDKIISFGPGVEKIAEEIGELFPSKEVLIMSSDTKITEN-----IQKIEKGDVDI 517 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG-KQGEV 594 +IGTQ++AKG+ FP +TL+A++D D ++ + D R++E+ Q+ Q GR GR G V Sbjct: 518 VIGTQIIAKGYDFPRLTLLAIIDSDVSMHTGDLRNSEKSFQILQQAIGRVGRRKVYPGRV 577 Query: 595 VLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQ 654 VLQ++ + +++ L + F ++ L R ++PP++ + + + + + Sbjct: 578 VLQSYSTDSVVVEALKNNDRETFYKEELKMRLAEEMPPFSRLISIIISGLIEREVIAYAR 637 Query: 655 QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINT 714 ++ I + ++ V GP PA R R+R++IL+ P ++++ L Sbjct: 638 KIAKTI----IPIREINVFGPCPAAIGMRKKRFRYRILIVVPKNFFSRNMLTDLLTQF-- 691 Query: 715 IPDSRKVKWVLDVDPI 730 +KV+ +D DP+ Sbjct: 692 -TAEKKVEVQVDTDPL 706 >UniRef50_A1TVM2 Primosomal protein N' n=12 Tax=cellular organisms RepID=A1TVM2_ACIAC Length = 763 Score = 594 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 268/766 (34%), Positives = 362/766 (47%), Gaps = 103/766 (13%) Query: 3 VAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLN 58 + VA+ P + Y ++ G VRVP G + E +G+V + Sbjct: 61 IVSVAVQTPAHSAVGGPLSYA--SAHPLEPGTLVRVPLGTR-EVLGVVWDAPADAP---- 113 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 L AA P+ VL P+ R A A +Y Sbjct: 114 --------------------ELPRGAAVR---PVAGVLEGLAPLDAAWRRLVAFAARYYQ 150 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 A + L L+ L L Sbjct: 151 RALGE--------------------------------VALAALPPQLRDLTPAQLARRLR 178 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 P + + E L+ EQ A AI + +LL G TGSGKTEVYL + Sbjct: 179 RAPAATAGEAAPPYAPEPHALSAEQQAATDAIAA---RPGPFLLYGSTGSGKTEVYLRCV 235 Query: 239 ENVL--AQGKQALVMVPEIGLTPQTIARFRERF-----NAPVEVLHSGLNDSERLSAWLK 291 + L Q LVMVPEI LTPQ ARF RF V LHSG+ +RL +WL Sbjct: 236 QQALAADPSAQVLVMVPEINLTPQLEARFLARFAPLYGADSVVSLHSGMTHPQRLKSWLA 295 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIP 351 A G+A IV+GTR A+F L +IV+DEEHD+SYKQQEG RY ARDLA++R + Sbjct: 296 AHAGQARIVLGTRMAVFASLPGLALIVVDEEHDASYKQQEGARYSARDLAIWRGREQDAK 355 Query: 352 IILGSATPALETLCNVQQ-------KKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLA 404 +ILGSATP+LE+ + +Y L + R G ++D+ Q A + Sbjct: 356 VILGSATPSLESWHASRPPTDGDPGGRYLRLHMPSRIGAGALPRVRLVDMAQQPRGAVFS 415 Query: 405 PALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCH 464 P L+ + + ++ Q ++ LNRRGFAP L C +CGW ++CP C + H+ LRCH Sbjct: 416 PPLVAAITERVERGEQCLVLLNRRGFAPVLHCTECGWKSDCPHCSAHQVFHKIDRSLRCH 475 Query: 465 HCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF-----PG---VPISRIDRDTTS 516 HC + VP CP CG+ + P+G GTEQLE+ LA L P ++RID DTT Sbjct: 476 HCGFAQRVPYACPGCGNPDIAPIGRGTEQLEEQLAALLRNVITPERRAARVARIDADTTK 535 Query: 517 RKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQ 576 KGALE+QLA+VH G +L+GTQM+AKGH F +TLVA + DGALFS+DFR+ ER Sbjct: 536 AKGALEEQLAQVHAGEVDVLVGTQMVAKGHDFRRITLVAAVQPDGALFSSDFRAPERLFA 595 Query: 577 LYTQVAGRAGR-------AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQ 629 L Q AGRAGR G E+ +QT+HP+H + L Y AFA + LAER Sbjct: 596 LLMQAAGRAGRDAGYVAAQGGACEMWVQTYHPDHAVYAALRRHDYPAFAARQLAERAEAA 655 Query: 630 LPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLAD-EKLWVLGPVPALAPKRGGRWR 688 +PP+ +VRA+ + A FL + L E++ V PVP + R Sbjct: 656 MPPFAFQALVRADARTQEVAQTFLAACAEAARQAGLPGLEQVTVFPPVPLAIQRVANVER 715 Query: 689 WQILLQHPSRVRLQHIINGTLALI---NTIPDSRK-VKWVLDVDPI 730 Q+LL+ PSR LQ + L+ P R V+W++DVDP+ Sbjct: 716 AQMLLESPSRAALQRFLAAWQPLLHACRADPAHRGLVRWLVDVDPL 761 >UniRef50_C9RL78 Primosomal protein N' n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RL78_FIBSS Length = 672 Score = 593 bits (1529), Expect = e-168, Method: Composition-based stats. Identities = 218/730 (29%), Positives = 335/730 (45%), Gaps = 75/730 (10%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 V +P+ P F Y +PEG ++ G V V +++ + +V V K Sbjct: 13 RFCEVYIPLS-PSVFTYGVPEGADIQRGSVVWVQLARRKPTLALVSRVHSE--------K 63 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 +V + P + V+ ++ Y + V + + +R Sbjct: 64 PSFDVRYACPHESGYVF------SERYMESLEWVSKYYISSPMR---------------- 101 Query: 122 EQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETP 181 F A L + + Sbjct: 102 ----------------------------------TLNVFWPADFDKFLDALLAEKSEPRG 127 Query: 182 EFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADT--FSAWLLAGVTGSGKTEVYLSVLE 239 E V + L EQ TA+ ++ D F LL GVTGSGKT VY ++ Sbjct: 128 EAPSNGPEMEVCSDLPPLTGEQETALASLVEDLDKDGFRGTLLHGVTGSGKTRVYQELVR 187 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L + K+ L++VPEIGLTPQT +RF + PV VLHS L+ ++ + +L +G A + Sbjct: 188 EALKRNKRVLILVPEIGLTPQTASRFEDYLKVPVVVLHSALSAPQKRAGYLAVLDGSAKV 247 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSAT 358 V+GTRSA+ +PF + V+++DEEHDSS+KQQ+ RYH RDLA + A ++LGSAT Sbjct: 248 VLGTRSAILSPF-DFDVVILDEEHDSSFKQQDPAPRYHTRDLAFHLAQKYGALVVLGSAT 306 Query: 359 PALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG--LAPALITRMRQHLQ 416 P LET N + +LL L RA A V+D+ + Q G ++PAL + + Sbjct: 307 PCLETFRNAKAGNLKLLTLKNRATAAPLPEVKVIDMGKVRQQKGVLMSPALREALSDCIA 366 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 +Q I+ +NRRG++ +C CG C C H+ + L CH+C + PV C Sbjct: 367 GGDQAIILMNRRGYSKIRVCTKCGETLYCKHCHIPLVYHKQYNALMCHYCAALYPVDTPC 426 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 P+CG+ VG E+LE+ + + R+DRDTT GA+E+ L IL Sbjct: 427 PTCGAETYEFVGGAIEKLEEEIHEWVADAKVIRMDRDTTQNVGAVEKILTSFRNREYNIL 486 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVL 596 +GTQM+AKGH FP V LV ++ D L DFRS ER QL +Q AGRAGRAG G V + Sbjct: 487 LGTQMVAKGHDFPGVKLVGIVGADSGLGIPDFRSTERLYQLLSQTAGRAGRAGSGGRVFI 546 Query: 597 QTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQL 656 QT +P P++Q + +D FAE + R+M PP+ V + + + +L Sbjct: 547 QTLNPTEPVMQYAIRHDFDGFAETESSNRQMAFYPPFCKLVEISCGSRDENLLRDTVNRL 606 Query: 657 RNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIP 716 +++ + + VLGPV A PK + ++ ++ + ++ ++ L Sbjct: 607 ESILRK----ESSMTVLGPVDAFVPKVQNVFWVKLYIKTQNLAAVRKVLAPILNAPKAWV 662 Query: 717 DSRKVKWVLD 726 ++K L+ Sbjct: 663 AGVEIKVELE 672 >UniRef50_Q123Y5 Primosomal protein N' n=2 Tax=Comamonadaceae RepID=Q123Y5_POLSJ Length = 739 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 262/802 (32%), Positives = 349/802 (43%), Gaps = 140/802 (17%) Query: 2 PVAHVALPVP----LPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPL 57 V + P + Y + G VRVP GK+ E +G+V ++ Sbjct: 3 YWIEVVVATPAHSAVAGPLTYR--SEFPLFPGALVRVPLGKR-EVLGVVWNL-------- 51 Query: 58 NELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWY 117 L R I L P+ + A +Y Sbjct: 52 ---------LPDSGGLPEKQIR-----------SIAGALDGLAPLATTWRKLVAFTAGYY 91 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + + L R + LA Sbjct: 92 QRSLGEVALAALPPQLR-----------------------------------ELSAVQLA 116 Query: 178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSV 237 + + + + L +Q A+ AD LL G TGSGKTEVYL Sbjct: 117 RRLKRPVLDTSCAPGTADLIALTPQQTKALAEFDGDAD-ARPALLFGATGSGKTEVYLRA 175 Query: 238 LENVLAQG--KQALVMVPEIGLTPQTIARFRERFN----APVEVLHSGLNDSERLSAWLK 291 VL Q Q LVMVPEI LTPQ ARF RF V +HSGL ++RL WL Sbjct: 176 AARVLEQDPDAQVLVMVPEINLTPQLQARFEARFAHLGKERVVPMHSGLTPAQRLKGWLA 235 Query: 292 AKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSE--- 348 A G+A +V+GTR A+ NL ++V+DEEHD SYKQQEG RY ARDLAVYRA E Sbjct: 236 AHTGQARLVLGTRMAVLASLPNLRLLVVDEEHDPSYKQQEGARYSARDLAVYRAKLETAE 295 Query: 349 ------QIPIILGSATPALETLCNVQQKKYRLLRLTRRAG-------------------- 382 ++LGSATP+LE+ +Y+ L +T R G Sbjct: 296 ARHAHGPCRVLLGSATPSLESWQATLTGRYQRLTMTERIGVPSSIGMEALQFSDGPPLGK 355 Query: 383 --------------NARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRR 428 + +D+ Q +AP L+ + Q + Q ++FLNRR Sbjct: 356 LAPPGGSELRAASERGGLPLVRRVDMNHQPKHCIIAPPLVEAIAQRVARGEQSLIFLNRR 415 Query: 429 GFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVG 488 G+AP L CHDCGW +ECP C Y H+ LRCHHC VPR CP CG+ + PVG Sbjct: 416 GYAPVLACHDCGWKSECPHCSAYRVFHKIDRTLRCHHCGFTERVPRACPDCGNIDIAPVG 475 Query: 489 LGTEQLEQTLAPLF-----PG-------VPISRIDRDTTSRKGALEQQLAEVHRGGARIL 536 GTE+LE+ LA L P V I+RID D+T KGALE QLA VH +L Sbjct: 476 RGTERLEEHLAELLAHVQRPDDGGVPGPVRIARIDADSTRLKGALESQLASVHAREVDVL 535 Query: 537 IGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAG---RAGKQGE 593 +GTQM+AKGH F +TLVA ++ DGALFS+DFR+ ER L Q GRAG R + E Sbjct: 536 VGTQMIAKGHDFRHITLVAAINPDGALFSSDFRAPERLFSLLMQAGGRAGRDARHSEASE 595 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 + +QT HP+HPL + L Y AFA + LAER + P+ +VRAE + A FL Sbjct: 596 MWVQTFHPDHPLFEALKKHDYPAFAARQLAEREAAGMAPFGFSALVRAEARAQEVAQGFL 655 Query: 654 Q-QLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 + +++ VP + R Q+L++ PSR LQ + ++ Sbjct: 656 NAAAASAKAQQVTGHDQVAAYPAVPMTIQRVANIERAQMLVESPSRAALQRFLAAWQPVL 715 Query: 713 NTIPDSRK----VKWVLDVDPI 730 ++W +DVDPI Sbjct: 716 FETRQHSDFKSLIRWAVDVDPI 737 >UniRef50_O83258 Primosomal protein N' n=3 Tax=Treponema RepID=PRIA_TREPA Length = 657 Score = 591 bits (1523), Expect = e-167, Method: Composition-based stats. Identities = 192/539 (35%), Positives = 281/539 (52%), Gaps = 9/539 (1%) Query: 193 SGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 + L+ EQ A+ AI ++ ++ + GVTGSGKTEV+L E VLA+GK + +V Sbjct: 126 RTDTYALSGEQRKAIDAITASTG-ARSFYVHGVTGSGKTEVFLRAAEAVLARGKSVIYLV 184 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEI LT Q + RF + VLHS L+ S+RL W + + +VIG RSA+F P K Sbjct: 185 PEIALTHQVLQEVYVRFGSQAAVLHSALSGSQRLGEWRRIQCMRHCVVIGARSAIFAPLK 244 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 LG++++DEEHDSSYK RYHAR +A+YR P ++GSATP++E + + Sbjct: 245 RLGLVIMDEEHDSSYKSAHVPRYHARQVAMYRCADANCPFVMGSATPSVEAWYAMLRGAV 304 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 R L LT R P V+D+ + + L+ L+ +R+ +A Q +LFLNRRGF+ Sbjct: 305 RRLPLTARVAGGAPPRVEVVDVSKEAL--LLSTRLVDEIRKTKEAGYQSMLFLNRRGFSY 362 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTE 492 + C CG+ C +C T H+ ++CH+C Q P CP C S G+GTE Sbjct: 363 SFQCRSCGYTLCCTQCAVPLTWHKRVGAMQCHYCGRQEAPPESCPCCHSFDTRYGGVGTE 422 Query: 493 QLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 552 +E+ + LFP I+R+D D G ++Q + + G +L+GTQM+AKG +FP + Sbjct: 423 YIEEAVQALFPEYRIARVDTDALRS-GHVQQTMEQFRAGKIDVLLGTQMIAKGFNFPTLR 481 Query: 553 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYK 612 LV + D L + DFR+AER L QVAGRAGR G V++QT +P HP + + Sbjct: 482 LVGIACADTGLHTPDFRAAERSFALMMQVAGRAGRYVDNGLVIIQTRNPAHPAVVCAQHG 541 Query: 613 GYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWV 672 ++F Q LA+R + PP+ + + A L+ + V Sbjct: 542 DCESFYAQELAQREALCFPPFVRLIRFVFRSKTRRKAKDAAYAAHALLTAQMPL--GADV 599 Query: 673 LGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 LGP + + G +R QILL+ PS +Q + L V DVDP+ Sbjct: 600 LGPAACVVAQVAGSYRMQILLRAPSFPVVQQVARSFLDEFRA---PAGVYVESDVDPVN 655 >UniRef50_B6YQC1 Primosomal protein N' n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YQC1_AZOPC Length = 664 Score = 589 bits (1518), Expect = e-166, Method: Composition-based stats. Identities = 210/741 (28%), Positives = 332/741 (44%), Gaps = 91/741 (12%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKA--GCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 V LP+PL TF Y +P M + G V V FG Sbjct: 2 YIEVILPLPLNGTFTYFVPTEMESQIMIGSLVVVGFG----------------------- 38 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADY--YHHPIGDVLFHALPILLRQGRPAANAPMWYW 118 +Y YH + + LP + + Sbjct: 39 -------------------------EYNKYHRGLVLCIEQILPSTINVEKIKPI------ 67 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + E + S R + G +++ + + + + S Sbjct: 68 LSVESSRPAIRQSQLRFWQWISNYYLCTLGNVFKTALPSSF------------HMKEKQS 115 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVL 238 E + + +LN Q I LL G+ E+Y+ ++ Sbjct: 116 ERCKIIPQPFS--------KLNELQKKIFDQIVENFQKKDVCLLHKNISLGEIEIYIHLI 167 Query: 239 ENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG-EA 297 E L Q +Q L ++PEI LT Q ++ F ++V HS +N ++R+ W + + Sbjct: 168 ERTLKQNRQVLYLLPEIALTRQITNHLKQFFGEQLDVYHSKVNLNKRMEIWNNLLSDKQY 227 Query: 298 AIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGS 356 I++G S++F PFKNLG+I+IDEEHDSSYKQQ+ YHAR+ A+ A +ILGS Sbjct: 228 QIILGVHSSIFLPFKNLGLIIIDEEHDSSYKQQKIAPYYHARNAAIVLATIHNSKVILGS 287 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDL----KGQKVQAGLAPALITRMR 412 ATP++E+ NVQ KY + +P +D+ + +K++ +P LI M+ Sbjct: 288 ATPSIESFYNVQIDKYSYINSNEYLKKTKPLPIISIDVKELKRKRKMKTIFSPLLIEHMK 347 Query: 413 QHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPV 472 Q L+ QVILF NRRGFAP + C C W +C CD T H+ L CH+C + Sbjct: 348 QKLKNGEQVILFQNRRGFAPCIFCKACNWTPKCHFCDINLTYHKESDRLTCHYCGRNYLL 407 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P +C CG+ +L +G GTE++E+ + LFPG ++R+D DTT K +L++ ++ G Sbjct: 408 PNKCFRCGNLNLQSIGYGTEKVEEEVQVLFPGASVARMDLDTTKVKKSLKKTISNFESGQ 467 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQG 592 +ILIGTQ++ KG + V L+ +LDVD + DFR+ ER QL Q+ + R QG Sbjct: 468 IQILIGTQIIYKGLNINKVGLIGILDVDTLMNFPDFRAYERTYQLILQMVEKVKRQRTQG 527 Query: 593 EVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLF 652 E++LQT HP HPL++ +L + Y + + ER + + PP++ + + + Sbjct: 528 ELILQTSHPNHPLIKIVLQQNYKGMYDMQIEERILFKYPPFSRLIHILLYHKREELLCKV 587 Query: 653 LQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQ---HPSRVRLQHIINGTL 709 + +L+ V+G + K G + +ILL+ + S + L+ I+ G Sbjct: 588 SDKYVHLLQEKLGD----RVVGHDKPIVGKIKGLYIRKILLKIEVNASSIALRKILEGIH 643 Query: 710 ALINTIPDSRKVKWVLDVDPI 730 I R+V DVDPI Sbjct: 644 TKILKTAGLRRVIIHYDVDPI 664 >UniRef50_C1SGK8 Primosomal protein N' n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SGK8_9BACT Length = 648 Score = 588 bits (1517), Expect = e-166, Method: Composition-based stats. Identities = 173/540 (32%), Positives = 267/540 (49%), Gaps = 10/540 (1%) Query: 192 VSGERLRLNTEQATAVGAIHSAA-DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV 250 + L LN Q + I+S+ D FS L+ GVTGSGKTE+++ + + V+A+GKQ L Sbjct: 113 FEPKELTLNEAQLSVYNGIYSSLKDGFSTHLVHGVTGSGKTEIFIELAKKVIAEGKQVLY 172 Query: 251 MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTP 310 +VPEI LTPQ R R V HS +R A+ G +++G RS+LF P Sbjct: 173 LVPEISLTPQLENRLSARMGFDVLSYHSKKTPKKRKEAFWSFSAGTLPMMLGARSSLFVP 232 Query: 311 FKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQK 370 K +G+I++DEEH+SSYKQ E Y RD++V +IP+IL SATP+LE+ N + Sbjct: 233 AKEIGLIIVDEEHESSYKQDEIPSYQLRDMSVLYGKILKIPVILASATPSLESWANAKSG 292 Query: 371 KYRLLRLTRRAGNARPAIQHVLDLK-GQKVQAGLAPALITRMRQHLQADNQVILFLNRRG 429 KY + R + ++D+K + + L+ L + + + QVIL +NR+G Sbjct: 293 KYLYHSIPCRP-DTDMPEIQIVDMKEEEPIGGILSIPLYDAIYETINRGEQVILLINRKG 351 Query: 430 FAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGL 489 ++ L C CG I C C T +++ + +C++C + P +C CGS + G Sbjct: 352 YSHTLYCRKCGNIINCSNCSVAVTYYKSTNTCKCNYCSQEVRRP-KCLHCGSDDITDYGA 410 Query: 490 GTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFP 549 GTE++ + L F I R+D + L + L G I+ GTQ++AKG F Sbjct: 411 GTEKVAEVLETAF-EKKILRLDTENVKSYKKLSEMLKSFEDGEYPIMAGTQLVAKGLDFG 469 Query: 550 DVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTL 609 +VTL ++++D DFR+ ER QL Q+AGRAGRA K+G VV+QT PE L + L Sbjct: 470 NVTLAGIINIDNMFTLPDFRANERAYQLLLQLAGRAGRADKKGRVVIQTAMPELDLFKRL 529 Query: 610 LYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEK 669 F E +A R++ PP+ + + + + +L Sbjct: 530 DCLD-TTFYEMEMARRKLFNYPPFYKMCRITLSHTKEEAVKDAAFLVYDTLLRF---KND 585 Query: 670 LWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 V P A K R+R+ I+++ P L +I + ++ +D DP Sbjct: 586 AEVFYPAQAPIYKIQNRFRYGIIIKSPLNSELSKLIRAAANTLKDN-AKTTLRIKIDRDP 644 Score = 88.4 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 4/100 (4%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M V LPVP + Y ++ G R VP G++ GIV+ + A + + Sbjct: 1 MKYYDVILPVPTGGIYTYT--SEDEIQNGVRATVPLGRR-TLTGIVLRENTAPD-ESIKY 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL 100 + + V D+ P+F+ L++ ++YY G VL + Sbjct: 57 RNISTVHDTNPIFSCEYMDLIMKISEYYCAGAGQVLKGVI 96 >UniRef50_A5CFA8 Primosomal protein N' n=2 Tax=Orientia tsutsugamushi RepID=A5CFA8_ORITB Length = 646 Score = 588 bits (1516), Expect = e-166, Method: Composition-based stats. Identities = 197/571 (34%), Positives = 305/571 (53%), Gaps = 13/571 (2%) Query: 163 AALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLL 222 A L + K L +E P ++ + + L L+ EQ A AI A LL Sbjct: 85 ADLGTVAKMTLPIELNEKPYVAESQEVNHSLFQLLDLSPEQQLAFDAIRKTTG---ATLL 141 Query: 223 AGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLND 282 G+TGSGKTE+Y ++ L QG Q L+++PEI L RF RF + +S ++ Sbjct: 142 QGITGSGKTEIYFHLIAEALRQGLQVLLLMPEINLAGHIAFRFASRFKFNAVIWNSSVSK 201 Query: 283 SERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAV 342 S + E +VIGTRS++F P+ +LG+I++DEEHD SYKQ+ Y+ARD+AV Sbjct: 202 SLKKKTLRGILTNEIKVVIGTRSSIFLPYSSLGLIIVDEEHDQSYKQENNILYNARDMAV 261 Query: 343 YRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG 402 R H IP+IL SATP+LE++ N KKY L++L R G++ +++D+K + + G Sbjct: 262 MRGHIANIPVILASATPSLESIYNTYNKKYSLVKLKSRFGSSTLPNINIIDMKKEHLPNG 321 Query: 403 --LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHH 460 L+ +L M Q L+ + Q++LFLNR+G+AP +LC +CG+ C C H++++ Sbjct: 322 MWLSTSLKNAMEQTLKLNKQILLFLNRKGYAPIILCRNCGFRFMCSSCSSCLVFHKSKNK 381 Query: 461 LRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGA 520 L+CHHC S +P + CP C L G G E++ + + FP + + RDTT+ Sbjct: 382 LQCHHCGSFKPFAQSCPECNEQTLSAYGPGIERIAEEVKVYFPKYKTAIVSRDTTNTIDN 441 Query: 521 LEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQ 580 + L ++ I+IGTQML KG+HFP++ LV ++D D + D R+ E+ QL Q Sbjct: 442 STEILQQIINNEVDIIIGTQMLTKGYHFPNLKLVGIIDAD-LGYGGDLRANEKTYQLLNQ 500 Query: 581 VAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVR 640 VAGRAGR +G V +QT++P+ LL+ L+ D F + R +PP T V + Sbjct: 501 VAGRAGREEDKGYVYIQTYYPDSSLLKYLINYKDDDFINYEMNLRISNNMPPATRFVAIS 560 Query: 641 AEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVR 700 + Q+A + + L +LGP PAL K ++R++ILL ++ Sbjct: 561 VISTSEQNAQEVAKNIVRTAK----PCSSLRILGPAPALLYKLKNKYRFRILLIFERKLD 616 Query: 701 LQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++ I L S++V +D+DP Sbjct: 617 IRSYIKHWNIL---SFHSKRVSLKIDIDPYN 644 Score = 60.3 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 12/129 (9%) Query: 18 YLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHSV 77 Y + + G V VPF + ++ GIV V+ + +K ++ Sbjct: 17 YKSTTHL-LSIGDLVVVPF-RNKQITGIVCEVNIIPQHK--NIKEIIAKQFQGYSIKPIN 72 Query: 78 WRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPK 137 + + A YY +G V LPI L + Y +++ L SP+ Sbjct: 73 LKFIDIVARYYIADLGTVAKMTLPIELNEK--------PYVAESQEVNHSLFQLLDLSPE 124 Query: 138 QQQALAALR 146 QQ A A+R Sbjct: 125 QQLAFDAIR 133 >UniRef50_UPI0001C31BDF primosomal protein N'''' n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BDF Length = 745 Score = 585 bits (1508), Expect = e-165, Method: Composition-based stats. Identities = 232/737 (31%), Positives = 341/737 (46%), Gaps = 36/737 (4%) Query: 11 PLPRTFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDS 69 L FDYLL G+ V+ G + VPF + + +G+VV ++ + +P +L A V+ Sbjct: 28 ALRGPFDYLLGPGLEHVQVGTLLVVPFAGR-DVLGVVVELAGETGVPPEKLAAPRSVV-- 84 Query: 70 EPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILL---RQGRPAANAPMWYWFATEQGQA 126 EP + L W D Y L LP + R + A Sbjct: 85 EPGVPAELVALARWITDEYCSTPARALGLVLPPGAGRATRPRVRTRRVLVAEATDAGRAA 144 Query: 127 VDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDW 186 + + +PKQ++ L L + L+ L +GL L Sbjct: 145 LADGGQRLTPKQREVLETLAAAGPLPAT--QTGGDHGGLRRLADRGLLQLEQREQRRRPV 202 Query: 187 --RTNYAVSGERLRLNTEQATAVGAIHSAADTF--------SAWLLAGVTGSGKTEVYLS 236 RL EQ A+ I +A + +LL GVTGSGKTEVYL Sbjct: 203 HAAVGARNGAAPPRLTAEQIAALEPIVAALEAGDGALSPADRRFLLHGVTGSGKTEVYLQ 262 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 L G+ +V+VPEI L PQT+ARF+ RF V VLHS L ER W++ + GE Sbjct: 263 AAAAALRAGRNVIVLVPEIALAPQTVARFQARFGDTVAVLHSQLGQGERYDEWMRLRRGE 322 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A I +G RSA+F P ++G++++DEEH+ +YK + RY AR +A RAH ++ GS Sbjct: 323 ARICVGPRSAVFAPLADVGLVIVDEEHEPAYKHEGDPRYDARRVAARRAHDAGAVLLSGS 382 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQ 416 ATP E++ +++ + +LD++ + L P + + Sbjct: 383 ATPRPESVHALRRLRILRR-----VDGRPLPPVEILDMRD--ARHPLHPVTREALGDVRR 435 Query: 417 ADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQC 476 A + I+ +NRRG++ L C CG + CP CD LH++Q + CHHC VPR C Sbjct: 436 AGRKAIVLVNRRGWSNFLSCRSCGRVWNCPECDVALVLHRSQRAVSCHHCGHSERVPRTC 495 Query: 477 PSCGSTHLVPVGLGTEQLEQTLAPLF--PGVPISRIDRDTTSRKGALEQQLAEVHRGGAR 534 P CGS L G GTE++EQ L P P+ R+D DTT+ KGA+ + L + A Sbjct: 496 PDCGSVSLARHGAGTERIEQELIEAIGDPAFPVFRLDADTTATKGAIAKALGQFDAAPAG 555 Query: 535 ILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQ-GE 593 +L+GTQ++AKGH FPDVTL +LD D L DFR+ ER L Q+AGRAGR G Sbjct: 556 VLVGTQIVAKGHDFPDVTLGVVLDADQTLRFPDFRAEERTFSLVAQLAGRAGRGQHGDGR 615 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 V++QT + P + D F L R +++ PP+ S + V + A Sbjct: 616 VLVQTLATDAPSIVAAARHDSDGFLAGELGRREILRYPPFASLIRVVCSAPDAADAHAAA 675 Query: 654 QQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALIN 713 + L+ + VLGP A + G+ R Q++++ R + + + Sbjct: 676 DAVARLVDA-----PGATVLGP--APLFRLRGKERSQLVIKATQRRAAVQSVAAAVDAVA 728 Query: 714 TIPDSRKVKWVLDVDPI 730 P R+V DVDP Sbjct: 729 RTPVGRRVSLSADVDPQ 745 >UniRef50_C7H5H5 Primosomal proteiN n' n=2 Tax=Faecalibacterium prausnitzii RepID=C7H5H5_9FIRM Length = 728 Score = 584 bits (1507), Expect = e-165, Method: Composition-based stats. Identities = 197/597 (32%), Positives = 311/597 (52%), Gaps = 22/597 (3%) Query: 11 PLPRTFDYLL-PEGMT-VKAGCRVRVPFGKQ-QERIGIVVSVSDASELPLNELKAVVEVL 67 + + Y + P+ V+ G V VPFG+ + R+G+V++ +E +LK + +V Sbjct: 15 HFDKLYTYAVMPDQQDTVRLGSMVLVPFGRGSRARMGVVLAC--DAEPESAKLKFLFDVA 72 Query: 68 DSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGR---------PAANAPMWYW 118 + T + RL+ + + + + +P + + + Sbjct: 73 PASACLTPELLRLVHFLKERTFCTYYEAVKAVIPYGAQYKPTVAEDGVTPVLQKQLVRHT 132 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLAS 178 + + + KQ A+A L G+ + + A L L KG+ + + Sbjct: 133 ENAYKLVGTLPPKPRPTAKQLAAVALLAGGERTLSALEEKGISRAVLDNLCAKGVLECSK 192 Query: 179 ETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAW--LLAGVTGSGKTEVYLS 236 + ++ + E + L EQ A A+ + + LL GVTGSGKT V+L Sbjct: 193 VNKSIDLY-SSIPLKNEPILLTEEQQAAYDALLPGLEDAAPHSALLYGVTGSGKTLVFLK 251 Query: 237 VLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGE 296 ++E+ L G++ALV+VPEI LTPQ I R + +F V V HS LN +ERL W ++G Sbjct: 252 LIEHCLQMGRRALVLVPEISLTPQMILRLKSQFGKRVAVQHSALNHTERLLQWQMIQDGG 311 Query: 297 AAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGS 356 A IV+GTRSA+F+P +N+G+++IDEE + +Y+ + RY A ++A RA ++L S Sbjct: 312 ADIVVGTRSAIFSPLENIGLVIIDEEQEHTYRSESAPRYSAHEVARQRAAENGALLLLAS 371 Query: 357 ATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAG---LAPALITRMRQ 413 ATP+ E+ Q + +L+RLT+R G ++D++ + ++ A+ +R Sbjct: 372 ATPSTESYYAAQHGRTQLVRLTKRYGGNPLPKVQIVDMRAELASGNPREISLAMEDAIRH 431 Query: 414 HLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQR-PV 472 +L+A Q IL LNRRG+ C DC + +C +C H++ H L CH+C SQ P Sbjct: 432 NLEAGKQTILLLNRRGYQTVAQCEDCREVLKCQKCSVPMVYHKSAHKLLCHYCGSQMDPP 491 Query: 473 PRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGG 532 P +CP+CG L G GT++ E+ LA LFP I R+D+DTT+ K A E+ LA+ R Sbjct: 492 PARCPACGG-KLQYRGFGTQKAEEELAKLFPEARILRMDQDTTAAKDAHEKLLAKFARHE 550 Query: 533 ARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAG 589 I++GTQM+AKG F DVTLV +L +D LF+ FR+ E L TQV GR+GRA Sbjct: 551 YDIMVGTQMVAKGLDFEDVTLVGVLGIDSLLFAQGFRAYETVFSLVTQVVGRSGRAK 607 >UniRef50_C4XU37 Primosomal protein N' n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XU37_DESMR Length = 792 Score = 584 bits (1505), Expect = e-165, Method: Composition-based stats. Identities = 228/789 (28%), Positives = 347/789 (43%), Gaps = 68/789 (8%) Query: 6 VALPVPLPRTFDYLLPEGMTVK---AGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VAL P Y +P+G + G R+ VP G + R+G+V A+ P L+ Sbjct: 7 VALTTPPFSVLTYAVPDGFALADFPVGLRLLVPVG-RTLRVGVVAGCGVAAP-PGVTLRP 64 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAP----MWYW 118 + L+ P+ L A + +G +L LP LR + Sbjct: 65 ALWPLERAPLCDAGYLELAASLASRHMATVGRILGAILPRGLRSAKVVFTCRAAGLPKAL 124 Query: 119 FATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAA-------------- 164 AT + L+ +P + A R D + L + Sbjct: 125 TATALWRKSSDERLELAPAWRDGTMACRLEAGESDPLCCLAASPPWPVRPGAAKQVAVLD 184 Query: 165 ------------------------LQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLN 200 ++ L + GL + + + L Sbjct: 185 ALCDAGPMALSELKAKLGPGTLPLVRRLAELGLVRIEELETAAQVQPAETSAAVALPPLT 244 Query: 201 TEQATAVGAIHSAADTF--SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLT 258 EQA A+ ++ A D+ +A L+ GVTGSGKT +Y+ ++ L +G+Q L++ PE+ L Sbjct: 245 DEQAAAMDSLLPALDSPDGAARLVYGVTGSGKTRLYMELVRRTLERGRQVLLLAPEVALA 304 Query: 259 PQTIARFRERFN-APVEVLHSGLNDSERLSAWLKAKNGEAA-IVIGTRSALFTPFKNLGV 316 + F H + + R + + + G IV GTRSAL P ++LG+ Sbjct: 305 EKLHRAACRAFPEVGPAFYHGYQSPALREALFWRCGGGSPPAIVAGTRSALLLPLRDLGL 364 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 IV+DEEHD ++KQ++ Y A+++ +RA +LGSATP ++T Q ++R Sbjct: 365 IVLDEEHDGAFKQEDRLPYQAKEVGFFRARQSGALFVLGSATPDVKTFHAAQSGHVPMVR 424 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAG-------------LAPALITRMRQHLQADNQVIL 423 L RR G ++D++G G L A + Q + Q ++ Sbjct: 425 LERRVGGGGMPRVEIVDMRGAAKLTGSAVNRETGDRVGVLTDASAAALAQTVAEGGQAMI 484 Query: 424 FLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTH 483 LNRRG+AP L C DC CP CD T H+ + L CH+C RP P CP CG T Sbjct: 485 LLNRRGYAPLLFCLDCETPVRCPHCDLSLTFHKDRERLVCHYCGHARPHPSPCPGCGGTS 544 Query: 484 LVPVGLGTEQLEQTLAPLFP-GVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQML 542 +P+G+G E LE+ LA + P ++R+DRD R LA+ G +R+L+GTQML Sbjct: 545 FLPMGVGAEMLEEQLAGVLPAEAAVARLDRDVARRPEEARAVLADFAAGRSRVLVGTQML 604 Query: 543 AKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPE 602 +KGHHFPDVTLV D D D+R++ER QL TQVAGRAGR + G V++QT PE Sbjct: 605 SKGHHFPDVTLVIAADADLGRNLPDYRASERAFQLLTQVAGRAGRGERPGRVLIQTRMPE 664 Query: 603 HPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILS 662 P +L Y+ F ++ L+ RR + PP+ +VR + L + Sbjct: 665 DPFFGYVLRGDYEGFFDEELSRRRRLCYPPFVRLGLVRLSFPRDYEEGYALAAAAGEAMR 724 Query: 663 SPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVK 722 A +LGP PA GR R L++ P ++ + + + KV+ Sbjct: 725 RSAAAVGARLLGPAPAPLALVAGRRRLHCLIKSPDWPGVRQVFAAGAKTLEK---ADKVR 781 Query: 723 WVLDVDPIE 731 LD+DP++ Sbjct: 782 CTLDLDPVD 790 >UniRef50_B6BRY0 Primosomal protein N' n=3 Tax=Candidatus Pelagibacter RepID=B6BRY0_9RICK Length = 651 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 190/624 (30%), Positives = 313/624 (50%), Gaps = 22/624 (3%) Query: 110 AANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALR 169 ++ + +D+ LK++ + + + + + A++ ++ Sbjct: 46 FEKKNNRHFKIKSVLKKLDVVPLKKTTIKFLNWFSEYNIIPKGMALKLVLLSSNAIEKIQ 105 Query: 170 KKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSG 229 K S + L+ EQ ++ ++ + F +L G TGSG Sbjct: 106 KDAYKIFESNIK------------TNAIELSEEQKKSLRKMNVSNQKFRVHVLQGTTGSG 153 Query: 230 KTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAW 289 KT VY L+ ++ +G Q L+++PEIGLT Q +F+E F V HSG+ ++ W Sbjct: 154 KTMVYFEALKAIINKGFQGLILLPEIGLTGQFEKKFKEFFGFTPAVWHSGITKKKKEIIW 213 Query: 290 LKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQ 349 NGE +VIG RS+LF PFK LG+I++DEEHD SYKQ EG Y+ARD+A+ RA E Sbjct: 214 SGITNGEIKVVIGARSSLFLPFKKLGLIIVDEEHDQSYKQDEGVTYNARDMAISRASFEN 273 Query: 350 IPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK--VQAGLAPAL 407 IPI L +A P++ET N+++ K+ + +L +R NA +++L K Q+ L+ + Sbjct: 274 IPINLITAVPSIETYENIKKGKFTISKLEKRYKNASLPNYEIINLNETKLEKQSWLSKKI 333 Query: 408 ITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCD 467 I ++ HL ++QV+ FLNRRGF+P +LC+ C CP C H+ +++L CH+C Sbjct: 334 IEKVNFHLDKNDQVLFFLNRRGFSPHVLCNKCFNSYSCPNCSINLVYHKKKNNLLCHYCG 393 Query: 468 SQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAE 527 + + R C G + G G E++ + + FP I DT ++K + ++ L + Sbjct: 394 FKSSLKRTCVKEGDCEFIFSGPGVERISEEVKKNFPSKKIEIFSSDTMNKKSSSDK-LEK 452 Query: 528 VHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGR 587 + +IL+GTQ+++KG HFP + + ++D+D + D R AE+ QLY Q++GRAGR Sbjct: 453 IIDNEVQILVGTQLISKGFHFPSLNCIVVVDIDLSSQGHDLRGAEKNLQLYHQLSGRAGR 512 Query: 588 AGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQ 647 GK V QT++ ++ L D F ++ L RR LPP+ + + N Sbjct: 513 TGKPATVYFQTYNTNTKMISDLTNSNPDIFLDRELDIRRQNNLPPFQRFISLILTGDNEA 572 Query: 648 HAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIING 707 +N I VLGPV A + ++R ++L++ + LQ+ I Sbjct: 573 RLEKEAFYFKNFIEKKIKG----RVLGPVSAPIFRLKKKFRIRMLIRGSKSLNLQNSIAK 628 Query: 708 TLALINTIPDSRKVKWVLDVDPIE 731 +A S +K +DVDPI Sbjct: 629 IIA---NYKFSSGIKLSVDVDPIN 649 Score = 83.4 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 11/173 (6%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M + LP F Y + +K G V VPFGK + G+V + ++ Sbjct: 1 MK-VPILLPNIFNHPFTYE--SNLDLKIGDYVVVPFGKSKI-TGVVWDEFEKKNNRHFKI 56 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K+V++ LD P + + L W ++Y P G L L + +A + Sbjct: 57 KSVLKKLDVVP-LKKTTIKFLNWFSEYNIIPKGMALKLVLLSSNAIEKIQKDAYKIFESN 115 Query: 121 TEQGQAVDLNSLKRS------PKQQQALAALRQGKIWRDQVATLEFNDAALQA 167 + K+S Q+ + L+ + E A + Sbjct: 116 IKTNAIELSEEQKKSLRKMNVSNQKFRVHVLQGTTGSGKTMVYFEALKAIINK 168 >UniRef50_D1AX29 Primosomal protein N' n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX29_STRM9 Length = 643 Score = 578 bits (1489), Expect = e-163, Method: Composition-based stats. Identities = 169/537 (31%), Positives = 294/537 (54%), Gaps = 12/537 (2%) Query: 194 GERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVP 253 + LN Q A I ++ + + +LL G+T SGKTE+Y+ ++E L + K ++ ++P Sbjct: 116 KNNITLNEYQQKAYEDIVNSDE--NIFLLHGITSSGKTEIYIKLIEEALKKDKSSIFLLP 173 Query: 254 EIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKN 313 EI L+ Q + ++ F + + ++HS + + +L W+ +G + +++G RSALF P KN Sbjct: 174 EISLSSQMVKVIKKVFGSSISLIHSKMTPATKLKEWINIYSGNSKVILGARSALFAPVKN 233 Query: 314 LGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYR 373 LG I+IDEEH++SYKQ++ RYH+R++A+ RA E +ILGSATP+ E+ ++ ++ Sbjct: 234 LGYIIIDEEHENSYKQEDNARYHSRNVAIKRAMQEGAKVILGSATPSFESYYLAKKNLFK 293 Query: 374 LLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPA 433 L+ L +R N V+DL + ++ L+ L+ M+ L QVIL LNR+ + Sbjct: 294 LITLNKRFNNMELPEMEVVDLSNE--KSMLSEKLLQNMKTVLSKGEQVILILNRKLHSLL 351 Query: 434 LLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQ 493 + C +C CPRC ++++ L C HC+ +R + CP C S +L +G+G E+ Sbjct: 352 VRCIECKEKMICPRCSVNLRYSKSKNILECSHCEYRRKMYETCPYCESKNLELLGIGIEK 411 Query: 494 LEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTL 553 LE+ L+ LF I R+D T + + ++ E +I IGTQ+LAKG HFP+VTL Sbjct: 412 LEEELSDLFGSENILRMDSSTMTSQKDFDKAYKEFSENKYQIAIGTQILAKGFHFPNVTL 471 Query: 554 VALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKG 613 V +++ D L +DFR E+ QL TQ AGRAGR K+G+V+LQ++ P+ L+ +++ Sbjct: 472 VGIINTDQILSLSDFRVGEKTYQLVTQSAGRAGRGNKKGKVILQSYIPDSKLINSIMSGD 531 Query: 614 YDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVL 673 ++ + E + R+++ LPP++ + + D + A +++ I + + Sbjct: 532 FEGYFEYDMHIRKLLNLPPFSRMIKIIVSDKKEERALKVTKKIHKDISENFAEVSHIE-- 589 Query: 674 GPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 A K +R+ I ++ N L + + ++D+DP+ Sbjct: 590 ---KAPIFKMNDDFRYNIYIKSDKNEI---AKNRKLLFAIKGSSNNTTRILVDIDPL 640 Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 1/85 (1%) Query: 17 DYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVFTHS 76 Y + G V + F + ++ +G+V+ S E+ ++K + +V D S Sbjct: 13 TYTYESDFPLTIGSFVEIDF-RNKDLLGVVIRESKKEEIGDFKIKKIKKVKDDIVEIPES 71 Query: 77 VWRLLLWAADYYHHPIGDVLFHALP 101 + L ++ YY P Sbjct: 72 ILNLAIFINSYYITDFNASFKILGP 96 >UniRef50_B0S8N3 Primosomal protein N' n=6 Tax=Leptospira RepID=B0S8N3_LEPBA Length = 650 Score = 574 bits (1479), Expect = e-162, Method: Composition-based stats. Identities = 186/547 (34%), Positives = 271/547 (49%), Gaps = 12/547 (2%) Query: 187 RTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK 246 S LN Q A I + LL G+TGSGKTEVYL ++ ++L + K Sbjct: 112 VDTEVQSHLLHPLNEAQKKAYTEIKQNTH-ANTHLLYGITGSGKTEVYLHLMRDILQEPK 170 Query: 247 Q-ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 + +VPEI LT TIAR F V VLHS L SE+ +L K G+ I IGTRS Sbjct: 171 GSVIFLVPEISLTYPTIARIEAIFPNQVAVLHSHLRISEKFQNYLDLKEGKKRICIGTRS 230 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 A+F P +L ++V+DEEHD+SYK+ RYHAR +A+ R ++LGSATP++E Sbjct: 231 AIFAPLSDLKLVVMDEEHDASYKENGSPRYHARQVALQRILKTGGKLLLGSATPSIELYY 290 Query: 366 NVQQKKYRLLRLTRRA-GNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILF 424 + + L +RA A+ + D Q + ++ L ++ L+ Q+IL Sbjct: 291 LAKSGQIGFSILEQRANPKAKLPFVEMSD--KQDDKHLISGDLQFKISDRLKKKEQIILL 348 Query: 425 LNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHL 484 LNRRG+ P + CP+C H Q +RCH C + G L Sbjct: 349 LNRRGYNPFIFSPQTKEFVHCPKCTATLCYHSDQ-TVRCHLCGYHSNFYNLKQTFG-EDL 406 Query: 485 VPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAK 544 G GT++LE+ L FP I R+D+D++ K L ++ G IL GTQM++K Sbjct: 407 ELFGAGTQKLEEYLLSHFPSARIERLDQDSSKNKDVTRLVLEKLGEGELDILTGTQMISK 466 Query: 545 GHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHP 604 G + +VTLV +L+ + L DFRS+ER L +QVAGRAGR K GEV++Q++ PEHP Sbjct: 467 GLDYANVTLVGILNANHGLGVPDFRSSERTYALVSQVAGRAGRGEKPGEVIIQSNDPEHP 526 Query: 605 LLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSP 664 +L+ + Y AF E L R+ + PP+ + + A LI Sbjct: 527 VLKMAKEQNYPAFFEWELQFRKDLFYPPFARLARLVFRSKYEEVANKQSVVYGELIKEKK 586 Query: 665 LADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWV 724 ++ + +LGP K +R+ ILL+ S L++++ T T K Sbjct: 587 --EDSIVMLGPSQCPFYKIDNNYRYHILLKAKSITALRNLLKETK---QTFKLDSKCYIE 641 Query: 725 LDVDPIE 731 D+DP+E Sbjct: 642 YDLDPME 648 >UniRef50_C3XEQ9 Primosome assembly protein PriA n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XEQ9_9HELI Length = 695 Score = 571 bits (1473), Expect = e-161, Method: Composition-based stats. Identities = 198/740 (26%), Positives = 328/740 (44%), Gaps = 57/740 (7%) Query: 1 MPVAHVAL-PVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNE 59 M VA+ L Y + + + +V V + + +GI+V + Sbjct: 1 MCFIVVAIINRNLA-PLTYYTHDEVVLYDIMQVSV---RNKMELGIIVQIVSNQNFEF-- 54 Query: 60 LKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF 119 ++E S +T + LL + + YY IG P +R ++ + + Sbjct: 55 --EILEAKKSHFSYTQTQRILLPFMSAYYMQSIGITAQVFTPKDMRLESNIHSSGLPNFK 112 Query: 120 ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASE 179 + + +K Q + + + A + L + L Sbjct: 113 LQKNEDLESNHHIKCK--QTFDMESKYDKNLDSKNYALSPVSHPDLTENIESNLPQTE-- 168 Query: 180 TPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLE 239 + L++ Q I + S L+ G TGSGKTE+Y + Sbjct: 169 ------------ILCNLKTLSSNQQ----EIFTECSKRSLSLIFGTTGSGKTEIYFHAIA 212 Query: 240 NVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAI 299 L +GKQAL+++PEI LTPQ R F + HS +++ +NG+ I Sbjct: 213 KTLKEGKQALLLMPEISLTPQMQERLNTAFPNLADTWHSKRTATQKQKILQSLQNGKLKI 272 Query: 300 VIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATP 359 + G RSALF PF+NLG+I++DEEHD SYK Q +YHARDLA++ + I +ILGSATP Sbjct: 273 IAGARSALFLPFENLGLIIVDEEHDDSYKSQSNPKYHARDLAIFLSTK-GIQVILGSATP 331 Query: 360 ALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADN 419 + ++ ++ Y LL L + N+ + + + Q G++ ++ + L+ Sbjct: 332 SPKSYYLAKKHNY-LLHLQNKFHNSTQTLHY-----DESEQIGISLHILHAITSTLERGE 385 Query: 420 QVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSC 479 QVI+FL R LLC C CP C +LH ++ L CH+C+ +PR C +C Sbjct: 386 QVIIFLPTRANFKILLCRTCKQKILCPNCSITLSLHSKKNALVCHYCNFTSQIPRVCNTC 445 Query: 480 GSTHLVPVGLGTEQLEQTLAPLF------PGVPISRIDRDTTSRKGALEQQLAEVHRGGA 533 GS L V +GTE+ ++ L P I+ DRD S + L L + Sbjct: 446 GSDMLSGVRMGTEEFKKELETALLSHNLTPN--IAIFDRDNVSTQKKLTALLHDFGEQKI 503 Query: 534 RILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGE 593 ILIGTQM+AKGH +P+VTL ++ +D L D+R+ E L QVAGR+GR G Sbjct: 504 DILIGTQMIAKGHDYPNVTLSVIIGMDYMLQIPDYRAHETSFSLLYQVAGRSGRKKH-GN 562 Query: 594 VVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFL 653 +++QT + L+ L + Y L ER + PP+ ++R + + A Sbjct: 563 ILVQT--KDFGLINNL-WGDYTKVLHYILHERNPL-YPPFCRLALLRFGHSSEKKAHNLA 618 Query: 654 QQLRNLILSSPLADE-KLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALI 712 ++ +++ ++ ++G A K ++ +QILL+ + + LQ + L Sbjct: 619 KEFASILHKIQCENDYAFEIVGVSEASIFKIKKKYYYQILLRAYNNLTLQKALQHALKY- 677 Query: 713 NTIPDSRKVK--WVLDVDPI 730 ++ +K +D+DP+ Sbjct: 678 ----ATKDIKNCVDIDIDPL 693 >UniRef50_A7HND9 Primosomal protein N' n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HND9_FERNB Length = 775 Score = 567 bits (1461), Expect = e-160, Method: Composition-based stats. Identities = 196/767 (25%), Positives = 334/767 (43%), Gaps = 77/767 (10%) Query: 26 VKAGCRVRVPFGKQQERIGIVVSVSDASELPLN--------ELKAVVEVLDSEPVFTHSV 77 ++ G RV + K ++ +G V+ + + E +VE +D S Sbjct: 24 IEIGERVLLQ-HKGKKVLGYVIGNQEWAPCDEFLPNQKSSSEYSKIVERMDYISFLEKSR 82 Query: 78 WRLLLWAADYYHHPIGDVLFHALPILLR--------------------QGRPAANAPMWY 117 + L A++Y +G + P Sbjct: 83 VKALYGLANFYFSGLGKYFDISFPNKFDDYFSLFVESVSPFVNIEKMPYEEFKKIKNYKE 142 Query: 118 WFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLA 177 + + K+ +++ + L + + + Sbjct: 143 YINNGLVKVYRDFETKKPRPRKRGECVYLKISSIELSKLKLTVSQSTVVNYLLFKGPTEV 202 Query: 178 SETPEFSDWRTNYAVS----------------------GERLRLNTEQATAVGAIHS-AA 214 + E D + + V +R+ L+ EQ + V I S Sbjct: 203 EQIIEDLDVKKDVVVQLKNKGIIEILEQCSDFETLNIKPQRVILSDEQKSIVDKILSYDF 262 Query: 215 DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNA-PV 273 L+ G TGSGKTEVYL V+E L G L +VPE+ LT QTIAR R+RF + Sbjct: 263 RKEKKHLVFGPTGSGKTEVYLEVIEKYLPFG-NVLYLVPEVSLTEQTIARLRKRFPDLSI 321 Query: 274 EVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGW 333 V HS L +S+R+ W KA GE I++G RSA F P KNL + ++DEEHD Y Sbjct: 322 AVYHSYLTESKRVEIWAKAVKGEINILVGPRSAAFVPLKNLNLAIVDEEHDEGYYNNSEP 381 Query: 334 RYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLD 393 Y ++ + ++ I ++ GSATP+LE+ + +Y +LT+R N ++D Sbjct: 382 FY---EIHTFL-NALPITVVYGSATPSLESYKKAKDGEYVFHKLTKRY-NVELPEVEIVD 436 Query: 394 LKG-QKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYY 452 + +KV ++ L + + L+AD I+F R+GF+ + C CG+I +C CD Sbjct: 437 MNKTKKVTFSISEILYNNLSKVLEADKSAIIFTRRKGFSR-VQCAVCGYIVKCEHCDVAM 495 Query: 453 TLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDR 512 T H ++L+CH C S++ + CP+CGS + G G+E++E+ L LFP I RID Sbjct: 496 TYHLDSNNLKCHICGSEKELSLNCPNCGSNMFIDRGTGSEKVEKELQQLFPSRNIGRIDA 555 Query: 513 DTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAE 572 + L++ L + G I+ GT+M+ KG + L+ ++DVD + D + Sbjct: 556 EIADTPEKLKKLLDYLREGKIDIVAGTKMITKGLDIYRIALIGVVDVDALISYPDINAPL 615 Query: 573 RFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPP 632 R QL QV GRAGR K G+ ++QT+ P P++ + + F E+ L R+ + PP Sbjct: 616 RTFQLLVQVIGRAGRNEK-GKAIIQTYKPTDPVITFASNQDVEGFYERELEIRKQLNYPP 674 Query: 633 WTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL--------WVLGPVPALAPKRG 684 + S V++ + N + A + + + I + ++K+ +LGP K Sbjct: 675 FASVVVLTYANLNQEIARETIDTVADEIENIEKKEKKVQEVYKYYLELLGPSEHPIFKAN 734 Query: 685 GRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++R+QI + + L ++ ++ + +W++ V+P E Sbjct: 735 NKYRYQIFFKTNNVPELVRLLKKIISNYSG-------EWIIKVNPNE 774 >UniRef50_Q5FEP8 Primosomal protein N' n=11 Tax=Anaplasmataceae RepID=Q5FEP8_EHRRW Length = 664 Score = 557 bits (1436), Expect = e-157, Method: Composition-based stats. Identities = 194/541 (35%), Positives = 304/541 (56%), Gaps = 16/541 (2%) Query: 196 RLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG--KQALVMVP 253 ++ L+ Q A I ++S LL G TGSGKTEVY V+ ++ + Q LV++P Sbjct: 133 KINLSDVQKQAYNNIIGKISSYSVILLDGETGSGKTEVYCEVIRELVTRDNTAQVLVLLP 192 Query: 254 EIGLTPQTIARFRERFNAPVEV-LHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 EI LT Q I R + F V HS L R WL G+++IVIG RSALF PFK Sbjct: 193 EIVLTLQLIKRIKYYFENYFPVEWHSNLTVKSRREYWLSIAYGQSSIVIGARSALFLPFK 252 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 NL +I++DEEHD+S+KQ G Y+ARD+++ A IP+IL SATP+LET+ N+Q+ +Y Sbjct: 253 NLKMIIVDEEHDASFKQDYGVIYNARDMSIVLAKQFNIPVILSSATPSLETISNIQKSQY 312 Query: 373 RLLRLTRRAGNARPAIQHVLDL-KGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFA 431 +RLT+R G+A+ ++DL K + V L+ L + M + LQ +QV+LFLNRRG+A Sbjct: 313 YHVRLTQRFGDAKLPTVKIIDLCKSKMVNRWLSYDLYSSMLKVLQRQDQVMLFLNRRGYA 372 Query: 432 PALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST-HLVPVGLG 490 LC CG+ +C C + H+ ++ L CH+C + +C +C ++ G+G Sbjct: 373 TLRLCKTCGFKVQCKNCATWLIEHKRRNVLLCHYCGYSCTIVDECYNCLDKSSVISYGIG 432 Query: 491 TEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPD 550 E++ + + L P I+ I D +S++ + + + + I+IGTQ++AKGH+FP Sbjct: 433 VEKVAEDIMTLIPDAKIAIISSDISSKEIGV--TIDLIMQNKVNIIIGTQVIAKGHNFPK 490 Query: 551 VTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLL 610 +TLV ++D D L ++D R+ ER QL QVAGR+GR + EV+LQT+ + L+++L Sbjct: 491 LTLVGVIDADLGLNNSDLRATERTYQLLHQVAGRSGRFVDRSEVILQTYDANNALIKSLS 550 Query: 611 YKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKL 670 + F + L R + Q+PP+T + + N +Q+ + L Sbjct: 551 SYNRELFYDLELKSRLLTQMPPYTRLIGIIVTGKNEAKVINVSKQIVKSLP------TTL 604 Query: 671 WVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 VLGP PA ++R++IL++ + V +Q ++ + + KVK ++DVDPI Sbjct: 605 TVLGPAPAPISLLNRQYRYRILIKVQNNVVIQKLLTRYKEYYAS---TGKVKIIIDVDPI 661 Query: 731 E 731 Sbjct: 662 N 662 Score = 82.3 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 6/102 (5%) Query: 3 VAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSD----ASELPLN 58 +A V LPVP+ +TF Y +P G V VPFG + +GIV+++SD E+ ++ Sbjct: 7 IAEVLLPVPVNKTFFYNIPYNENFIVGDYVIVPFGSR-LIVGIVLAISDSIPSTCEVNIS 65 Query: 59 ELKAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHAL 100 +LK V S P ++ + W +DY P G +L Sbjct: 66 QLKMVN-CKGSLPGICSALIHFIKWVSDYNVVPAGLILKMVF 106 >UniRef50_A6Q1U1 Primosomal replication factor Y n=2 Tax=Epsilonproteobacteria RepID=A6Q1U1_NITSB Length = 610 Score = 547 bits (1411), Expect = e-154, Method: Composition-based stats. Identities = 181/546 (33%), Positives = 285/546 (52%), Gaps = 36/546 (6%) Query: 186 WRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQG 245 + + + + ++L+ +Q A+ LL G TGSGKT+VYL+ ++ V+ +G Sbjct: 99 YESGGDIDAKEVKLSAKQQKALQFAKD----KGISLLFGDTGSGKTQVYLAWMKEVVQRG 154 Query: 246 KQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRS 305 K+A+ ++PEI LTPQ + R F V + HS L+ +R + + G+ +V G RS Sbjct: 155 KEAIFLMPEIALTPQMLKRIEAVFGEAVALWHSRLSKKKREETLRRIREGKVKVVAGPRS 214 Query: 306 ALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLC 365 ALF P KNLG+I++DEEHD SYK Q R HARD+AVY + IP++LGSATP++ + Sbjct: 215 ALFLPLKNLGLIIVDEEHDDSYKSQSRPRIHARDIAVYMGKTLNIPVLLGSATPSVSSF- 273 Query: 366 NVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFL 425 K+Y RL + + + D G++ L+ +++ L Q ++FL Sbjct: 274 ----KRYPSFRLKGSYFGGQ--KRFIFDTSQ-----GVSSQLLGELQKVLDQKKQALIFL 322 Query: 426 NRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLV 485 R L+C +CG +CP CD ++H +H L CH+C+ + +P++CPSCGS+ L Sbjct: 323 PTRAHFKYLICQECGEAVKCPYCDVGMSVHFDEHALECHYCNFKEYIPKKCPSCGSSELS 382 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 LGT Q++ L FP I R D+D S + LE+ + E + IL+GTQML+KG Sbjct: 383 TKRLGTAQIQSELQQHFPYARIERFDKDAVSTQRKLEKLIKEFAQKKIDILVGTQMLSKG 442 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H +PDV L ++D+D L AD+R+ ER L+ Q++GRAGR V++QT Sbjct: 443 HDYPDVALSVVMDIDYVLAMADYRARERAVSLFVQISGRAGRKES-ANVLVQT--KNEAF 499 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPL 665 YD F E LA R+ + PP+T + N + ++Q+ + + Sbjct: 500 FDRYKE--YDLFLEDELALRKDL-YPPFTRLAQLNFAHKNEKKVKEAMEQVLSCLK---- 552 Query: 666 ADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVL 725 EK+ ++G P K G++R+ ILL+ S L I + + Sbjct: 553 GFEKIEIVGYGPNAIEKIAGKYRYHILLRSSSSKALLQAIYVCKNDL----------CDV 602 Query: 726 DVDPIE 731 D+DP++ Sbjct: 603 DMDPVQ 608 >UniRef50_C6HZ36 Primosomal protein N' n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZ36_9BACT Length = 673 Score = 541 bits (1393), Expect = e-152, Method: Composition-based stats. Identities = 197/720 (27%), Positives = 307/720 (42%), Gaps = 83/720 (11%) Query: 15 TFDYLLPEGMT-VKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKAVVEVLDSEPVF 73 Y P+ T + G RV VP G++ G+V SV + L+ + VLD Sbjct: 32 LLTYRNPDPSTWIPPGTRVAVPLGRR-TVAGLVWSV--PAPPFDGTLRDIAGVLDPA--- 85 Query: 74 THSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFATEQGQAVDLNSLK 133 P+ + WY+ A Sbjct: 86 ---------------------------PVFPSPLHTLVSFGAWYYKIPPGLLAKSALPPS 118 Query: 134 RSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVS 193 S + + + + Sbjct: 119 LSLPKSLPASFWKAYG----------------------------------APLEEEKREW 144 Query: 194 GERLRLNTEQATAVGAIHSAADTF-SAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMV 252 + L+ Q+ A+ + +LL GVTGSGKT +Y + + L++G LV+ Sbjct: 145 TDLPPLSLAQSDALREWEEKRHHPFAPFLLRGVTGSGKTRLYQEMAKTALSEGSSVLVLT 204 Query: 253 PEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFK 312 PEIGL + R + HS +ER A+ + +G +V+G RSALF+P Sbjct: 205 PEIGLVAPLLEAMRAISPLAEGI-HSAQTKAERTRAFARILSGRVPVVVGPRSALFSPLS 263 Query: 313 NLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKY 372 LG+I++DEEHD SY+ EG ++AR+LA+ RA IP++LGSATP +++ +V +Y Sbjct: 264 RLGLIIVDEEHDPSYQAYEGLSFNARNLAIRRAQDLGIPVVLGSATPLSDSIFHVSSGRY 323 Query: 373 RLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAP 432 L L R G H++ + L + R+ L Q ++ LNRRG+ P Sbjct: 324 HGLSLPGRIGGRSLPAIHLIP--SGSGSSPLPDPVPERIAASLDRGEQSVILLNRRGYVP 381 Query: 433 ALLCHDCGWIAECPRCDHYYTLHQ-AQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGT 491 LLC C CP C H+ + CH C S VP CP+C L G T Sbjct: 382 TLLCRSCHTTLSCPSCAVRLVFHKVPDRRMICHSCASSYAVPSLCPTCLGRDLELRGTAT 441 Query: 492 EQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDV 551 ++LE+ L FPG I R+D D+ +++LA G IL+GTQ++AKGH P V Sbjct: 442 QKLEEILGKHFPGARIIRLDADSAQ---DGQERLAAFREGEGDILVGTQVVAKGHDLPKV 498 Query: 552 TLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLY 611 T +L+ DG L D+R++ER L Q+AGR GR + G+V + T P++P+L Sbjct: 499 TYGVVLETDGMLAFPDYRASERAFGLILQLAGRVGRHREGGQVDIVTRDPDNPVLGWARD 558 Query: 612 KGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLW 671 +AF ++ L ERR++ PP+T V + L + R+ P + Sbjct: 559 YNQEAFYKETLDERRLLGYPPFTRLASVILSSTHEAPIREALAE-RSPFGKFPAGNG--- 614 Query: 672 VLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 + GPVPAL PK R+R Q++++ P+ + + + + + K+ +DP + Sbjct: 615 IFGPVPALPPKLKNRYRAQVVIKGPTIGLVHNRLEQVRSYYQSR---GKILVEWQIDPFD 671 >UniRef50_Q7VFX4 Primosomal protein N' n=3 Tax=Helicobacter RepID=Q7VFX4_HELHP Length = 637 Score = 538 bits (1386), Expect = e-151, Method: Composition-based stats. Identities = 174/589 (29%), Positives = 285/589 (48%), Gaps = 18/589 (3%) Query: 146 RQGKIWRDQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQAT 205 + +A+ + GL E S + ++ E L+ EQ Sbjct: 62 NCFLPHQILLASFIAQYYCVGLGESYGLFVPQESKSEESANKNLAELTFELKTLSREQNE 121 Query: 206 AVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARF 265 A+ + + + LL G TGSGKTE+Y+ ++ + LAQ K L ++PEI LTPQ +R Sbjct: 122 ALKFLL----SHTNPLLFGDTGSGKTEIYIHLIAHTLAQAKNTLFLMPEIALTPQIESRL 177 Query: 266 RERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDS 325 RE F V + HS + +++ L +G I+ G RSALF P + LG++++DEEHD Sbjct: 178 REVFGDAVGIWHSKVTPAQKRKLLLALHSGTIRIIAGARSALFLPIRELGLVIVDEEHDD 237 Query: 326 SYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNAR 385 +YK Q Y+ARD+A+Y I ++LGSATP++ + N ++ + RL R + Sbjct: 238 AYKSQSTPYYNARDMALYLGSKTNIKVVLGSATPSVVSYYNAIKQD-SVYRLRGRYFTSH 296 Query: 386 PAIQHVLD---LKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWI 442 +I V + + + L+ ++++ L+ + Q I+F+ R L+C +CG Sbjct: 297 KSIYIVSQNPQMTIETESTPIDEGLVAKIKEKLEHNEQAIVFIPTRAHYKMLVCSECGSG 356 Query: 443 AECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 EC C +LH ++ L CH+C P+P CP C S L +GT Q+ Q L Sbjct: 357 IECAFCSVNMSLHLDKNALICHYCHWSSPIPTLCPKCKSESLHSHRIGTAQVAQALQKAL 416 Query: 503 PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGA 562 P I+ DRD + L+ L + + G +L+GTQML+KGH + V L +L +D Sbjct: 417 PNAKITLFDRDNITTHTKLKTILQKFNDGDIDVLVGTQMLSKGHDYHRVNLAIILGIDYV 476 Query: 563 LFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQAL 622 L +D+R ER L Q+AGR+GR GEV +Q+ + L+ L Y+ F L Sbjct: 477 LKGSDYRCNERAISLLHQIAGRSGRKYD-GEVYVQSAN--SIFLEQFLR-DYEDFLHYEL 532 Query: 623 AERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPK 682 R + PP+ + A +Q +R ++L L ++ ++G AL + Sbjct: 533 RNRPHL-YPPYQRLATLTFSHKIESKALNAMQNVREILLKRGLG--EVEIVGDSKALVER 589 Query: 683 RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPIE 731 ++R+ +LL+ PS L +++ A + + +DVDP+ Sbjct: 590 LYNKYRFILLLRSPSARALLELLHYLNAHTHQDLGR---MYEIDVDPLN 635 >UniRef50_A6LJP7 Primosomal protein N' n=2 Tax=Thermosipho RepID=A6LJP7_THEM4 Length = 742 Score = 537 bits (1384), Expect = e-151, Method: Composition-based stats. Identities = 185/767 (24%), Positives = 329/767 (42%), Gaps = 74/767 (9%) Query: 4 AHVAL-PVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELKA 62 VA+ +TF L+ V+ G RV V ++ IG V+ N + Sbjct: 3 YEVAISNKSFRKTF--LVKSEFVVEKGERVLVRL-NNKKEIGYVLDRK-----KGNFVGE 54 Query: 63 VVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWF--- 119 ++ +D + + ++ A+ ++ P+G + P L + Sbjct: 55 IISKVDGKSFLRGWLVDAVVEASSFFGAPVGKLFDLCFPKGLENYFVERVYSNNPLYDFN 114 Query: 120 -------ATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKG 172 + G+ LK + L+ ++ L+ + + + + Sbjct: 115 GINLNEFVEKYGEKKLKELLKNDAVYIKKDFNLKAPNPRKELYVYLKASLSEISEKKLTK 174 Query: 173 LCDLASETPEFSDWRTNYAVSGER----------------------------LRLNTEQA 204 + +D + + + L+ Q Sbjct: 175 KQKKVVDYLLVNDIVSYTELREFLGINKDVLLQLKRKDILIIDKKIPQKVGRVLLSDNQK 234 Query: 205 TAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIAR 264 V I +A+ + LL GVTGSGKTE+YLSV+E +AL +VPE+ L QT+ R Sbjct: 235 KVVEDILNASSSK--VLLYGVTGSGKTEIYLSVIE---QTNYKALYLVPEVSLIEQTVRR 289 Query: 265 FRERFNAP-VEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEH 323 R V + HS L S+++ W++A G+ I++GTRSA F PF ++ +IV+DEEH Sbjct: 290 IYARLPEKKVGIYHSYLTKSQKIDVWMRAVKGDIDILVGTRSAFFVPF-DMDMIVVDEEH 348 Query: 324 DSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGN 383 D SY Q Y D+ + +I GSATP L+ + +L L R Sbjct: 349 DESYYQDGEVIY---DVNFLIERFPGL-VIFGSATPRLDHYMEAKNGNMKLCILKERY-G 403 Query: 384 ARPAIQHVLDLKGQKVQAG-LAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWI 442 + ++++K +K ++ ++ +++ L++ VILF+ R+G++ ++C +CG I Sbjct: 404 TKLPNVEIINMKEEKKVIPYVSEVVVESVKKELESGKSVILFVRRKGYS-LIMCQNCGHI 462 Query: 443 AECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLF 502 +CP CD T H+A+ L+CH C + CP+CGS GLGTE++E LF Sbjct: 463 LKCPNCDVSLTYHKAEGKLKCHICGFEASRYMVCPNCGSVLFYEKGLGTERIELEFQKLF 522 Query: 503 PGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGA 562 PG I R+D + + L +++ G +L+GT+M+ KG P V L+ ++DVD Sbjct: 523 PGRNIVRVDTEVVRDFKKFQVILKKLYSGEIDVLVGTKMITKGLDVPTVNLIGVIDVDAI 582 Query: 563 LFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQAL 622 D+ S+ +L QV GRAGR + G +QT+ + ++ L + + + E L Sbjct: 583 QNIPDYNSSLNLFRLLVQVVGRAGRKER-GRAFVQTYEKDSEVISYALKQDVEGYYEYEL 641 Query: 623 AERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPK 682 +R+ ++ PP+ + + V + +++ + L +LGP PK Sbjct: 642 KKRKDLRYPPFQNIIQVIVFSKDKNLGYENTKKIVEELRKH-----NLEILGPTEFFIPK 696 Query: 683 RGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDP 729 + + +++ R+ +I ++ T K L V+P Sbjct: 697 IKNNFLYHFIVKTNEVKRVNTLILEIISKFPT-------KIKLRVNP 736 >UniRef50_B9LA69 Primosomal protein N' n=2 Tax=Nautiliaceae RepID=B9LA69_NAUPA Length = 601 Score = 536 bits (1380), Expect = e-150, Method: Composition-based stats. Identities = 168/534 (31%), Positives = 269/534 (50%), Gaps = 43/534 (8%) Query: 197 LRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIG 256 ++L +Q A+ + +L G TGSGKTE+Y+ ++E VL G+Q L ++PEI Sbjct: 108 IKLTDKQQEALKFLKKN----DVSVLFGDTGSGKTEIYIKLIEEVLNDGQQVLFLLPEIA 163 Query: 257 LTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGV 316 +T Q R ++ F + + HS + ++ GE IV G RSALF P +NLG+ Sbjct: 164 ITSQMEKRLQKYFGEALAIWHSKITKKKKQQILSGIAKGEIKIVAGARSALFLPLENLGL 223 Query: 317 IVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLR 376 I++DEEHD SYK ++ +Y+A+DLAVY +ILGSATP + L K+ R Sbjct: 224 IIVDEEHDDSYKSEQTPKYNAKDLAVYFGKIYDAKVILGSATPLISDLY-----KFPHFR 278 Query: 377 LTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLC 436 L N + K + ++ +I +++ ++ + QVI+FL R ++C Sbjct: 279 LKGTFYNTK---------KTRYFRSTFDDFIIQKIKDTIEKNKQVIIFLPTRANFKYMIC 329 Query: 437 HDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQ 496 +CG +C CD ++H+ + L CH+C+ +P C CGS + +GT + + Sbjct: 330 AECGKAVKCKHCDVAMSVHKNKRALVCHYCNYSMHIPSSCEYCGSEEFINERMGTSEFLE 389 Query: 497 TLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVAL 556 L +FP I + DRD + K +++ L ILIGTQML+KGH +PDV L + Sbjct: 390 VLKGIFPDAVIEKFDRDVITSKSRVDKLLKRFANKEIDILIGTQMLSKGHDYPDVALSIV 449 Query: 557 LDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDA 616 LD+D L SAD+R+ ER L QV GRAGR GEV++QT +PE + Y+ Sbjct: 450 LDIDFVLNSADYRAGERAFALARQVEGRAGRKED-GEVIIQTLNPE------FFDRSYEE 502 Query: 617 FAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPV 676 F ++ + R+ + PP+ + + +D + A + + I + P ++G Sbjct: 503 FYDEEIQNRKELGYPPFNRLIKIEFQDKDKIKAKEKMDRFLRCIGNRP------EIVGSG 556 Query: 677 PALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRKVKWVLDVDPI 730 A K +R+Q+LL+ + L II + + +DVDP+ Sbjct: 557 EAPIFKIKNIFRYQVLLKGKN---LHKIIYPCVNINE---------MKVDVDPV 598 Score = 62.2 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 10/133 (7%) Query: 1 MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNEL 60 M +A+ + P TF Y + G V + ++ G VV Sbjct: 1 MKYYDIAV-INTPNTFTYS--SNFELNPGDVVEIEVRNRKT-TGYVVKEVQKPNFEC--- 53 Query: 61 KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA 120 K ++ L S F+ +++ + YY PIG+ + + N Sbjct: 54 KVILSKLYS---FSSKKQKIIDFICKYYFAPIGEAAGLFYECKIENVKWKINNVKTDIKL 110 Query: 121 TEQGQAVDLNSLK 133 T++ Q K Sbjct: 111 TDKQQEALKFLKK 123 >UniRef50_Q5GRP1 Primosomal protein N', superfamily II helicase, PriA n=9 Tax=Wolbachia RepID=Q5GRP1_WOLTR Length = 786 Score = 532 bits (1372), Expect = e-149, Method: Composition-based stats. Identities = 173/506 (34%), Positives = 275/506 (54%), Gaps = 31/506 (6%) Query: 247 QALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSA 306 Q L+++PEI LT Q + R R + + + HSGL R + WL NG A I+IG RSA Sbjct: 287 QVLILLPEIVLTSQLVNRIRSQTSRNLAEWHSGLTLKTRRNNWLNTANGNAQIIIGARSA 346 Query: 307 LFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPALETLCN 366 LF P+KNL +I++DEEHDSS+KQ++G Y+ARD+A+ A E IPIIL SATP LET+ + Sbjct: 347 LFLPYKNLKLIIVDEEHDSSFKQEQGTIYNARDMAIILAKIENIPIILSSATPLLETIYH 406 Query: 367 VQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQVILFLN 426 V+ Y ++L +R G A + V+D + K ++ L ++Q ++ QV+LFLN Sbjct: 407 VKNGNYNYVKLAKRFGGAELPLIKVVDTRNNKQ--WISNELFEGIKQTIEKKQQVMLFLN 464 Query: 427 RRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQCPSCGST-HLV 485 RRG+A +C CG+ C C + H+ ++ L CHHC Q +P +C +C S L Sbjct: 465 RRGYAQLAVCKKCGYKIPCSNCAVWLVYHKKKNALLCHHCSYQLKLPEKCSNCQSKQSLF 524 Query: 486 PVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKG 545 G+G E+L + L P + I D S ++ L E I+IGTQ++AKG Sbjct: 525 LYGIGIERLLEETVKLIPNAKTAIISSDQKSVSNVIDLVLKE----ELNIIIGTQIIAKG 580 Query: 546 HHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPL 605 H+FP +TLV +++ D +L +AD R+AE+ QL QVAGR+GR ++G V++QT+HPE + Sbjct: 581 HNFPKLTLVGVINADLSLENADLRAAEKTYQLLHQVAGRSGRFNEKGMVIVQTNHPESSV 640 Query: 606 LQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSS-- 663 ++ L ++ D+F E L R ++PP++ + + N ++ + + + Sbjct: 641 IKALQHQKRDSFYEIELESRYKAKMPPFSRLIALIICGKNQIATQKAANEIASFLHNQCL 700 Query: 664 -----------------PLADEKLWVLGPVPALAPKRGGRWRWQILLQ--HPSRVRLQHI 704 ++ +LGP PA ++R+++LL+ + + +Q Sbjct: 701 SKKLPSSSSLSFQCLTLKSRKKEFEILGPSPAAISFLNNKYRYRVLLKIYNKHSLSVQKK 760 Query: 705 INGTLALINTIPDSRKVKWVLDVDPI 730 + + N P + +DVDPI Sbjct: 761 LKYWIKNCNLSP---NIIVTIDVDPI 783 Score = 88.8 bits (219), Expect = 8e-16, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 11/138 (7%) Query: 2 PVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGIVVSVSDASELPLNELK 61 +V LP+P+ + F Y + E V G V VPFGK + IGIV S+ ++ ELK Sbjct: 3 RTVNVLLPLPIDQLFSYAVKENTDVSVGDYVVVPFGK-KRLIGIVWKYSNKND---QELK 58 Query: 62 AVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFAT 121 + + ++ P + W A Y IG + + G + Sbjct: 59 FIEQKIN-LPNIRLKLIAFAEWVAQYNVISIGMLAKVIM------GGVLKVNHLDKLVHV 111 Query: 122 EQGQAVDLNSLKRSPKQQ 139 EQ Q V + + +P+QQ Sbjct: 112 EQEQEVSEINYQLNPEQQ 129 Score = 58.8 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 29/92 (31%), Positives = 39/92 (42%) Query: 153 DQVATLEFNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS 212 + VA + A G + + VS +LN EQ A I S Sbjct: 78 EWVAQYNVISIGMLAKVIMGGVLKVNHLDKLVHVEQEQEVSEINYQLNPEQQIASNKIIS 137 Query: 213 AADTFSAWLLAGVTGSGKTEVYLSVLENVLAQ 244 + +S LL G TGSGKTEVYLSV+ ++ Sbjct: 138 NLNEYSVTLLDGETGSGKTEVYLSVIAQLIKN 169 >UniRef50_A3EQU2 Primosomal protein N' (PriA) n=2 Tax=Leptospirillum sp. Group II RepID=A3EQU2_9BACT Length = 661 Score = 532 bits (1371), Expect = e-149, Method: Composition-based stats. Identities = 192/629 (30%), Positives = 295/629 (46%), Gaps = 12/629 (1%) Query: 100 LPILLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLE 159 +P+ R+ + L L P L + + W ++ Sbjct: 36 IPLGKREIVGFIWNATPPSPQKKLTLKPVLEILDSYPVLPPCLHPIYEFSSWFYRLPLGL 95 Query: 160 FNDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHS-AADTFS 218 L K L + + + + + +Q + AD FS Sbjct: 96 LLRNTLPQPLAKPLPLSSKIQQPAPSPPSR--ATSDLPPMTEDQKQVFLEWEAKQADQFS 153 Query: 219 AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHS 278 +L GVTGSGKT +Y + ++ ++ +Q L++ PEIGL PQ F + V+HS Sbjct: 154 ITVLRGVTGSGKTRLYQEMAKHTFSRDRQVLLLTPEIGLVPQLEEAFSGLVP-RMGVIHS 212 Query: 279 GLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHAR 338 + +RLS+W+ GE ++V+G RSA F+P +LG+I++DEEHDS+Y+ EG ++ R Sbjct: 213 QITPMKRLSSWMSILRGEMSLVVGPRSAFFSPLTHLGLIIVDEEHDSAYQAWEGLSFNVR 272 Query: 339 DLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQK 398 +LA+ A QIP++LGSATP E+L +Y LL L RR + + + Sbjct: 273 NLALKYAQLRQIPVVLGSATPLAESLYYAGSHRYTLLSLPRRIHGSSLPEITL--TAPSR 330 Query: 399 VQAGLAPALITRMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQA- 457 + +L+ + Q L+ Q ++ LNRRG+AP L C C + C +C LH+ Sbjct: 331 KEKIFPSSLLGEIDQTLKDGEQTVILLNRRGYAPLLQCLTCKNVLMCKKCSVRLVLHKKP 390 Query: 458 QHHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSR 517 L CH C S+ P C CG T L GL T++ E L+ FP + R+D+DT SR Sbjct: 391 TRQLVCHLCASRFNPPDHCSECGGTFLSEDGLATQKAEDLLSFHFPNARVIRLDQDTRSR 450 Query: 518 KGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQL 577 + + A ILIGTQM+AKGH F VTL +L++D AL D+RS ER QL Sbjct: 451 EHSSR---TPFSETEADILIGTQMIAKGHDFRRVTLGIVLEMDQALSLPDYRSEERVFQL 507 Query: 578 YTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHV 637 Q+AGR GR G V L T P+ PL Q L D F + L ER+ PP+ Sbjct: 508 VLQLAGRVGRHRPGGRVHLVTAKPDLPLYQYLKNYDQDGFIQHVLRERKAFGYPPFGRIA 567 Query: 638 IVRAEDHNNQHAPLFLQQLRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPS 697 ++ + + + L + + + E + +LGPVPA K +R+Q L++ S Sbjct: 568 LLTLSSKDEKTLLEIVSSL-DRLWRAGHDTEGVSLLGPVPAPVYKAKLYYRYQYLIKSSS 626 Query: 698 RVRLQHIINGTLALINTIPDSRKVKWVLD 726 ++ I+ + + + V W +D Sbjct: 627 IEKIHSAIDFFQKQLAPVRGA-HVGWAVD 654 >UniRef50_C5ZWD1 Primosomal protein N' n=3 Tax=Helicobacter RepID=C5ZWD1_9HELI Length = 594 Score = 532 bits (1370), Expect = e-149, Method: Composition-based stats. Identities = 171/556 (30%), Positives = 273/556 (49%), Gaps = 29/556 (5%) Query: 176 LASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYL 235 + + + S ++ L+ +Q A+ I ++ + LL G TGSGKTE+Y+ Sbjct: 66 IFTPFVKNSTPIKQTSLDFTLPNLSPKQIQALDFI----NSHQSSLLFGDTGSGKTEIYI 121 Query: 236 SVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNG 295 ++ L Q K AL+++PEI LTPQ R F + HS L+ +R + NG Sbjct: 122 HLINQTLKQSKNALLLMPEISLTPQMEKRLYAVFGDILAFWHSKLSSKKRKEILKRLHNG 181 Query: 296 EAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILG 355 E I+ G RS+LF P +LG+I+IDEEHD +YK RYH RD+A+Y A I I+LG Sbjct: 182 EIRILAGARSSLFLPLDHLGLIIIDEEHDDAYKSTSAPRYHTRDVALYLAKKTNIKILLG 241 Query: 356 SATPALETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHL 415 SATP T +Q + + RL ++ L P ++ ++++L Sbjct: 242 SATPLANTYYKFKQTQ-SVFRLKGTYYQSKKEFLFCHSSDE------LHPFVLQNLKENL 294 Query: 416 QADNQVILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQHHLRCHHCDSQRPVPRQ 475 QA Q I+FL R LLC+ CG +CP C +LH + L+CH+C P+P Sbjct: 295 QAHKQSIVFLPTRANFKHLLCNTCGNNIQCPNCSVSMSLHSKESSLKCHYCHYTSPIPES 354 Query: 476 CPSCGSTHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARI 535 CP CG T L + +GT++ L+ P I+ DRD+ + + L + L + I Sbjct: 355 CPICGGT-LSSLRIGTQEFANHLSKELPNANIACFDRDSITTQKKLTETLKNFNHHKIDI 413 Query: 536 LIGTQMLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVV 595 LIGTQML+KGH + +V L L +D L +D+RS E+ L Q++GR+GR G+V+ Sbjct: 414 LIGTQMLSKGHDYHNVALSVALGLDYILKGSDYRSREKALALMFQLSGRSGRKE-NGKVI 472 Query: 596 LQTHHPEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQ 655 +QT E L Y+ F ++ L R + PP+ +++ + A + + Sbjct: 473 IQTLQ-EDFFRNYL--DDYELFLQEELTFREHL-YPPFMRLALIKVSHKKQETAIIIIND 528 Query: 656 LRNLILSSPLADEKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTI 715 + ++ + +K+ ++G A K +WR+ ILL+ L ++ Sbjct: 529 ILTILKQNKT--DKIEIVGYGIAPIEKIANKWRYVILLRSKETKALHQMLLKI------- 579 Query: 716 PDSRKVKWVLDVDPIE 731 + + +D+DPIE Sbjct: 580 ---KNIPCEIDIDPIE 592 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.150 0.457 Lambda K H 0.267 0.0460 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,062,363,254 Number of Sequences: 3077464 Number of extensions: 260257676 Number of successful extensions: 887962 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2313 Number of HSP's successfully gapped in prelim test: 4088 Number of HSP's that attempted gapping in prelim test: 860352 Number of HSP's gapped (non-prelim): 17576 length of query: 732 length of database: 1,040,396,356 effective HSP length: 136 effective length of query: 596 effective length of database: 621,861,252 effective search space: 370629306192 effective search space used: 370629306192 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (41.8 bits)