301 c2v1uA_ Probab=94.89   E-value=0.21  Score=25.85  Aligned_columns=162  Identities=17%

Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---CCCCCEEEECCCCCCHHHHHHHHHHHHHHCCC-------E
Q ss_conf             1012221111223456788889989999999999861---16994899847988789999999999985398-------4
Q batch____       178 SETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAA---DTFSAWLLAGVTGSGKTEVYLSVLENVLAQGK-------Q  247 (732)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~l~~~Q~~a~~~i~~~~---~~~~~~Ll~a~TGSGKT~v~~~~i~~~l~~g~-------~  247 (732)
                      +...-.+.........+..+.-++..-+.+.+.+...   +.+..++++|++|+|||.++...+.+......       .
T Consensus         2 ~~~~~~~~~~~~~~~~p~~lvGRe~e~~~l~~~l~~~~~~~~~~~ilI~G~~G~GKT~la~~~~~~l~~~~~~~~~~~~~   81 (382)
T c2v1uA_           2 ESKIFRKRWVLLPDYVPDVLPHREAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKP   81 (382)
T ss_dssp             CCSSBSCHHHHSTTCCCSCCTTCHHHHHHHHHTTGGGTSSCCCCCEEECBCTTSSHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred             CHHHHHCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf             43554074414900088747495899999999999886079987899988889998999999999997414533375159


Q ss_pred             EEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             99993449999999999998739968999878786899999999846998099839889852202586899855210010
Q batch____       248 ALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSY  327 (732)
Q Consensus       248 vLil~P~~~L~~Q~~~~l~~~~~~~v~~~~~~~~~~~r~~~~~~~~~~~~~IvV~T~~~l~~~l~~l~liViDE~H~~~~  327 (732)
                      +-+-.+......+....+...++............................++                 ++||.+..  
T Consensus        82 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------ild~~d~l--  142 (382)
T c2v1uA_          82 IYVNARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIYII-----------------VLDEIDFL--  142 (382)
T ss_dssp             EEEETTTSCSHHHHHHHHHHHHSCCCCSSCCCHHHHHHHHHHHHTTSCSEEEE-----------------EEETTTHH--
T ss_pred             EEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE-----------------EECHHHHH--
T ss_conf             99612132127999999999741124555430467899999875420256730-----------------20002430--


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf             000103888999998413334872899838999
Q batch____       328 KQQEGWRYHARDLAVYRAHSEQIPIILGSATPA  360 (732)
Q Consensus       328 ~~~~~~~~~~~~~~~~r~~~~~~~~i~~SaTp~  360 (732)
                        ...-.....-............+++.|-.+.
T Consensus       143 --~~~~~~~~~l~~l~~~~~~~~~~i~~t~~~~  173 (382)
T c2v1uA_         143 --PKRPGGQDLLYRITRINQELVSLVGITNSLG  173 (382)
T ss_dssp             --HHSTTHHHHHHHHHHGGGCCCEEEEECSCST
T ss_pred             --CCCHHHHHHHHHHHHHCCCCEEEEEEECCHH
T ss_conf             --4853589999864430126648999628357