BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (207 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_D2TCX9 Colanic acid capsular biosynthesis activation pr... 268 8e-71 UniRef50_P20098 Colanic acid capsular biosynthesis activation pr... 260 2e-68 UniRef50_Q2NR13 Putative colanic acid capsular biosynthesis acti... 112 6e-24 UniRef50_D2TYJ5 Colanic acid capsular biosynthesis activation pr... 56 8e-07 UniRef50_C7BPK9 Colanic acid capsular biosynthesis activation pr... 52 1e-05 UniRef50_A4TLT7 LuxR-family regulatory protein n=34 Tax=Enteroba... 51 2e-05 UniRef50_A8GD04 Transcriptional regulator, LuxR family n=2 Tax=S... 49 1e-04 UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa... 45 0.001 UniRef50_B8KVU4 Transcriptional regulator, LuxR family protein n... 45 0.002 UniRef50_C7N6Z5 Response regulator containing a CheY-like receiv... 44 0.002 UniRef50_B3JKG3 Putative uncharacterized protein n=2 Tax=Bactero... 44 0.003 UniRef50_D0WHJ3 Transcriptional regulator, LuxR family n=1 Tax=S... 44 0.003 UniRef50_Q3A6T4 Transcriptional regulator, LuxR family n=1 Tax=P... 44 0.003 UniRef50_C9Y197 Transcriptional regulatory protein entR n=2 Tax=... 44 0.005 UniRef50_D0Z9D4 LuxR-family regulatory protein n=1 Tax=Edwardsie... 43 0.006 UniRef50_C7PCU2 Two component transcriptional regulator, LuxR fa... 43 0.007 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 43 0.008 UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa... 42 0.012 UniRef50_C0YKJ7 Response regulator n=1 Tax=Chryseobacterium gleu... 42 0.015 UniRef50_B2JQB0 Two component transcriptional regulator, LuxR fa... 41 0.022 UniRef50_B9XQH4 Two component transcriptional regulator, LuxR fa... 41 0.024 UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnoba... 41 0.025 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 41 0.030 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 40 0.040 UniRef50_D0J422 Two component transcriptional regulator, LuxR n=... 40 0.040 UniRef50_C8WKQ2 Transcriptional regulator, LuxR family n=1 Tax=E... 40 0.040 UniRef50_A3ZMK7 Two-component system response regulator n=1 Tax=... 40 0.048 UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleu... 40 0.053 UniRef50_A5FAM9 Two component transcriptional regulator, LuxR fa... 40 0.065 UniRef50_C7N3M6 Response regulator containing a CheY-like receiv... 40 0.067 UniRef50_C6X5T9 Regulatory protein, LuxR:Response regulator rece... 40 0.069 UniRef50_B5HDX5 LuxR-family transcriptional regulator n=1 Tax=St... 39 0.078 UniRef50_C0YJ73 Transcriptional regulator n=1 Tax=Chryseobacteri... 39 0.088 UniRef50_A6B1A6 DNA-binding HTH domain-containing protein n=7 Ta... 39 0.089 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 39 0.092 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 39 0.095 >UniRef50_D2TCX9 Colanic acid capsular biosynthesis activation protein A n=1 Tax=Erwinia pyrifoliae DSM 12163 RepID=D2TCX9_ERWPY Length = 229 Score = 268 bits (685), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 130/211 (61%), Positives = 167/211 (79%), Gaps = 4/211 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M TIIMD C+YTRLGLT Y+ +GVKK+ I+ I+ + L C +P VV INEDCFIH Sbjct: 19 MPTIIMDSCNYTRLGLTEYMTVKGVKKKNISLIDDIAQLQNKCQQLKPGVVLINEDCFIH 78 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ S+RI+ II QHP+TLF +FMAI+N+HF+EYL VR NL+I+SK+IK +LD +L D Sbjct: 79 ESDASERIRNIILQHPDTLFFIFMAISNIHFEEYLYVRNNLIITSKAIKISTLDSLLNDY 138 Query: 121 LKKETTIT----SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 +K++ ++ S + L+LS+TES+ML+MWM+G TIQISD+M IKAKTVSSHKGNI Sbjct: 139 FQKKSNLSVRHGSHSEVHPLTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNI 198 Query: 177 KRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR 207 KRKIKTHNKQVIYHVVRLTDNVT+GI+VN+R Sbjct: 199 KRKIKTHNKQVIYHVVRLTDNVTSGIYVNVR 229 >UniRef50_P20098 Colanic acid capsular biosynthesis activation protein A n=102 Tax=Enterobacteriaceae RepID=RCSA_ERWAM Length = 211 Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 127/211 (60%), Positives = 162/211 (76%), Gaps = 4/211 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M TIIMD C+YTRLGLT Y+ +GVKK+ I+ I + L C +P VV INEDCFIH Sbjct: 1 MPTIIMDSCNYTRLGLTEYMTVKGVKKKNISLINDIAQLQNKCQQLKPGVVLINEDCFIH 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ S+RI+ II QHP+TLF +FMAI+N+HF+EYL VR NL+I+SK+IK +LD +L Sbjct: 61 ESDASERIRKIILQHPDTLFFIFMAISNIHFEEYLYVRNNLIITSKAIKISTLDSLLNGY 120 Query: 121 LKKETTIT----SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 +K+ ++ + + +LS+TES+ML+MWM+G TIQISD+M IKAKTVSSHKGNI Sbjct: 121 FQKKLNLSVRHGTHSEVHPFTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNI 180 Query: 177 KRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR 207 KRKIKTHNKQVIYHVVRLTDNVT+GI+VN R Sbjct: 181 KRKIKTHNKQVIYHVVRLTDNVTSGIYVNER 211 >UniRef50_Q2NR13 Putative colanic acid capsular biosynthesis activation protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR13_SODGM Length = 217 Score = 112 bits (281), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 12/212 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ I+D C +TR + LL+ G I + V L + C P +V I++ ++H Sbjct: 1 MTAFILDHCVFTRSAMRS-LLNEGDLGENIYTLNDVLKLDMLCQKLTPDIVIISQR-YMH 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 N + +K +I + P T FI+F+ N+ + + ++ N++++SK + ++DD + Sbjct: 59 MQDNDRILKALIERLPRTFFIIFIGNENIVYKAIIPIKSNVIVTSKFL---AVDD-FSKL 114 Query: 121 LKKETTITSFLNMPT------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKG 174 L+ + + PT L S+TE +L MWMAG+ T I +NIK KT+SSHK Sbjct: 115 LRHFSGQEKYPLAPTVKRCAPLRFSKTERQILAMWMAGENTKAICAHLNIKDKTLSSHKI 174 Query: 175 NIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNM 206 NIKRK NKQ+IY+++++ ++VT+ ++ + Sbjct: 175 NIKRKTNADNKQIIYYILKIAESVTDDLYAAL 206 >UniRef50_D2TYJ5 Colanic acid capsular biosynthesis activation protein (LuxR-family transcriptional regulator) n=6 Tax=Enterobacteriaceae RepID=D2TYJ5_9ENTR Length = 199 Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 7/196 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D C YTRLG++ YL + K + +++ ++ P VV N + H Sbjct: 1 MKVLIIDECYYTRLGISEYL--SKINKLQFISQDSIKSAINHINNFSPDVVLANLTHYCH 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL--G 118 A +++ I + N F +++ + +L++ I SK I L+ ++ Sbjct: 59 HAEYCNQLQTFIEKLHNVRFYIYLDSPYPFTNRPILLKNQCFIMSKKILNYVLERLIETN 118 Query: 119 DILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKR 178 ILK IT N S E +++ WM I+ ++ I TV SHK +I Sbjct: 119 SILK---NITYLSNDNASIFSYQEQKIIKNWMNAVPNHVIARKLGISNSTVYSHKRHITE 175 Query: 179 KIKTHNKQVIYHVVRL 194 KI +N+ ++ V + Sbjct: 176 KIFVNNRIELFFVYNI 191 >UniRef50_C7BPK9 Colanic acid capsular biosynthesis activation protein a n=4 Tax=Enterobacteriaceae RepID=C7BPK9_PHOAA Length = 200 Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 13/192 (6%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIA-------CDSQRPSVVFI 53 M ++++ C YTR G++ +L K I DIE V +I C S P +V Sbjct: 1 MKILVVEECYYTRSGISEFL----KKNDSIEDIEIVGFSSINEAINIINCFS--PDIVLA 54 Query: 54 NEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESL 113 N + H AS + + NT +++ + D Y+ ++ N + +K L Sbjct: 55 NLTHYCHHASYCSNLHKFVTLLDNTRIYIYLDNPYPYCDNYITLKSNAFLLTKKNLSYLL 114 Query: 114 DDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 + + L++ ++ S E ++ WM QIS ++ I TV SHK Sbjct: 115 NKLSKTTLQEIQQYREKIDECCSIFSPQEHKIINYWMKEVPNYQISQKLKISNSTVYSHK 174 Query: 174 GNIKRKIKTHNK 185 +I KI N+ Sbjct: 175 RHIAEKINVRNR 186 >UniRef50_A4TLT7 LuxR-family regulatory protein n=34 Tax=Enterobacteriaceae RepID=A4TLT7_YERPP Length = 204 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 23/199 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D C YTR G+ YL S V ++ D+ TV++ +A +P ++ +N + Sbjct: 1 MKILIIDECFYTRSGVNTYLNS--VSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCR 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I+ +++ A+ F E + ++ P L + + I Sbjct: 59 YGGHCPLLAQFIHYCTRAKVYIYLD-ASYPFSE-----TPIPLTESVSMPIPLTESV-SI 111 Query: 121 LKKETTITSFLNMPTLSLSR--------------TESSMLRMWMAGQGTIQISDQMNIKA 166 L K+ +P SL R E ++ WM +I+ ++NI Sbjct: 112 LAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNISG 171 Query: 167 KTVSSHKGNIKRKIKTHNK 185 TV SHK +I KIK N+ Sbjct: 172 STVYSHKRHITEKIKVRNR 190 >UniRef50_A8GD04 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GD04_SERP5 Length = 208 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/189 (17%), Positives = 83/189 (43%), Gaps = 7/189 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D C +TR+G+ Y +I +++ + RPS + +N Sbjct: 1 MKLLVVDECCFTRVGIDNYFTDNVFA--QIKCCHSLEQATPLLEHYRPSHILVNLTKHCR 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +++ I P+ L +++ + + + + + + +K+ P +L + Sbjct: 59 HSEDDAQLQAFIEATPSALLFIYLDTPYPYSEAPMRIADHAFLFNKATLPVTLR-----M 113 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 ++++ ++ S E ++++ WMA +I+ ++ I + TV HK +I KI Sbjct: 114 MREKPVSLMDCSVEHSLFSPQELTVMKHWMAEMPNYRIAKKLQISSHTVYVHKRHITEKI 173 Query: 181 KTHNKQVIY 189 N+ Y Sbjct: 174 NARNRLEFY 182 >UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR Length = 194 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 6/127 (4%) Query: 56 DCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD 115 D + D+ + ++ + HP+ +++ A + H LL +L + +K +S+ Sbjct: 54 DIGLPDSDGLELLRRLRVHHPDCPVLIYSAEQSRH---TLLRAASLGAAGYVVKSQSMAQ 110 Query: 116 ILGDILKKETTITSFLNMPT---LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 +L IL +F ++P L L+ E ++ + G +QI++Q++I KTVS+H Sbjct: 111 LLSAILAVLGGQQAFPDLPERIDLPLTEKEQQIVALLARGLSNLQIAEQLHISNKTVSTH 170 Query: 173 KGNIKRK 179 K NI K Sbjct: 171 KKNILEK 177 >UniRef50_B8KVU4 Transcriptional regulator, LuxR family protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KVU4_9GAMM Length = 248 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 5/90 (5%) Query: 99 KNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQI 158 + LL ++P +D ++ +++IT M LSR E ++ + G ++ I Sbjct: 158 RELLSQHDPLQPGGVD-----VVDTDSSITMERRMKRFGLSRREKQVVELLRQGLSSLHI 212 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 +DQ+NI A+TV++H ++ K HN+ + Sbjct: 213 ADQLNISARTVNNHLRSVYDKCGVHNRTAL 242 >UniRef50_C7N6Z5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6Z5_SLAHD Length = 491 Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 LSR ES + ++W+ G G I D + I TV +H +I RK HN++ I Sbjct: 430 GLSRRESDVFKLWVTGHGLKYIQDTLFISESTVKTHMRSIYRKCDVHNREEI 481 >UniRef50_B3JKG3 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B3JKG3_9BACE Length = 215 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 45/210 (21%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 I+ D + TRLG+ L G + I + + +L++ S SVV I+ F D + Sbjct: 5 ILADNQAITRLGVKYLALEAGRELSSIKEAVGLQELSMMLSSYPDSVVIIDYTLF--DCT 62 Query: 64 NSQRIKLIINQHPNTLFIVF-----------MAIANVHF----------------DEYLL 96 Q + ++ + P ++F++F M + + F DE Sbjct: 63 ADQ-LWILKERFPQSVFVLFSDALSESFIRRMVLGGIQFSLLFKDSDVHEVAACLDEAEQ 121 Query: 97 VRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTI 156 R+ + + +KS E D + D MP L++ TE +LR G+ T Sbjct: 122 GRQYICMKAKSWLYEKERDAVSD-------------MPQLTM--TEKEVLRSLTLGKTTK 166 Query: 157 QISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 +I+ + + TV +H+ NI RK+ +N Q Sbjct: 167 EIAAERFLSVYTVMTHRKNIFRKLNVNNAQ 196 >UniRef50_D0WHJ3 Transcriptional regulator, LuxR family n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WHJ3_9ACTN Length = 532 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 27/52 (51%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 LSR E + +W+ G G I + + I TV SH NI RK THN+ I Sbjct: 470 GLSRRERDVFELWVTGHGLKHIENALYISEATVKSHLRNIYRKCDTHNRAEI 521 >UniRef50_Q3A6T4 Transcriptional regulator, LuxR family n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A6T4_PELCD Length = 508 Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 46/87 (52%) Query: 104 SSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 SS++I+ LD + ++ + S ++ L LS+TE + + AG T I + MN Sbjct: 407 SSENIRASYLDLVREQLIGLTSGSASEIDANLLKLSKTEMRICQFIQAGCSTKDICEAMN 466 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYH 190 + +TV +H+ NI+RK+ K V H Sbjct: 467 LAFETVQTHRKNIRRKLGLRGKNVNLH 493 >UniRef50_C9Y197 Transcriptional regulatory protein entR n=2 Tax=Cronobacter RepID=C9Y197_CROTZ Length = 201 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/190 (21%), Positives = 81/190 (42%), Gaps = 6/190 (3%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD---SQRPSVVFINEDCFIH 60 +++D C ++R GL +L + + D L A + +P++V + F+ Sbjct: 5 LLVDRCHFSRTGLESWL-NHAEDFAAPFHVTATDHLLRARELLIQWQPNMVIADLHGFMG 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVH-FDEYLLVRKNLLISSKSIKPESLDDILGD 119 D + + I NT ++ + + D+Y + I++K+I L ++G Sbjct: 64 DVHHVNQFSSIFAACGNTTRLILLQSGHSDVLDDYCSQQITWRIANKNIPLRELGQMIGK 123 Query: 120 ILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 L + L L+ E +L W G +I+ +M I KTV ++K NI+ K Sbjct: 124 ALMSRPPFGEPKTVTPL-LTLREERILEWWSEGMSNEEIARKMGIAVKTVYTYKRNIRMK 182 Query: 180 IKTHNKQVIY 189 + N+ ++ Sbjct: 183 LGADNRFSLF 192 >UniRef50_D0Z9D4 LuxR-family regulatory protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z9D4_EDWTE Length = 199 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/194 (22%), Positives = 84/194 (43%), Gaps = 18/194 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFI- 59 M ++++ C YTRLG++ L + K +N + T+D L + P ++F N + Sbjct: 1 MELLVLEPCRYTRLGIS--LFIQNEKNINVNYVSTLDALIAGGMEKNPDIIFANLTPYCK 58 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDE---YLLVRKNLLISSKSIKPESLDDI 116 HD + T FI A H+ L +++N+ + +K + P +L + Sbjct: 59 HDPLDLPLQAFFRYPQRATCFIYTQA----HYPYTQLPLYLQRNIYLINKKMTP-TLLRL 113 Query: 117 LGDILKKETTITSFLN-----MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L ++T L P L+ E ++ WM +I+ ++ + +TV + Sbjct: 114 LCCHAPRQTPPAHLLEQRYGAWPLLTTR--EIMVMHDWMQQTPNHRIAQRLRLSPRTVYA 171 Query: 172 HKGNIKRKIKTHNK 185 +K + KI+ N+ Sbjct: 172 YKRRLVEKIRVKNR 185 >UniRef50_C7PCU2 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PCU2_CHIPD Length = 220 Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 5/80 (6%) Query: 123 KETTITSFLNMPTLS---LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 K TTI S +P + LS+TE +++M G T +I+ +NI KTV +H+ NI +K Sbjct: 136 KHTTIISVPAIPQEAHHKLSKTEFRVMQMIAEGMSTKEIAQSLNISIKTVENHRHNISKK 195 Query: 180 IK--THNKQVIYHVVRLTDN 197 + HN + Y + LT Sbjct: 196 LNLTGHNSLIKYAIKNLTQQ 215 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 15/83 (18%) Query: 106 KSIKPESLDDILGDILKKETTITSFLNMPTLS----LSRTESSMLRMWMAGQGTIQISDQ 161 + I P+ + IL D+ MPT S L+ ES +LRM AG+ QI+++ Sbjct: 123 RYIDPDLAEKILFDV-----------RMPTASVQEQLTHRESQILRMLQAGKSVTQIANE 171 Query: 162 MNIKAKTVSSHKGNIKRKIKTHN 184 +++ KTVS+HK +K+ N Sbjct: 172 LSVSPKTVSTHKIRAMQKLHCQN 194 >UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6 Tax=Ralstonia RepID=B2UFA9_RALPJ Length = 222 Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 15/137 (10%) Query: 68 IKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTI 127 ++ ++ +HP+ +V + +L +I SKS +P+ + + + + + Sbjct: 72 LEFLMRRHPDLRVMVLTMLETRALMSNILRAGIKVIVSKSDEPQHILEGMQAAVDGRIYL 131 Query: 128 TSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + LN P L + E +LRM++ G+ +I+ Q+N KT+SS Sbjct: 132 SPLLNAKLLCRNGEPQPAHDDPVAKLGKRELEVLRMYVTGKTVSEIAQQLNRSVKTISSQ 191 Query: 173 KGNIKRKIKTHNKQVIY 189 K RK++ N+ ++ Sbjct: 192 KQTAMRKLELGNEAALF 208 >UniRef50_C0YKJ7 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YKJ7_9FLAO Length = 204 Score = 41.6 bits (96), Expect = 0.015, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 32/48 (66%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 SLS E + + + G G ++IS++M+I+ T+S++K I +K+KT N Sbjct: 144 SLSEREYEIFMLMVKGNGNLEISNEMDIQMSTISTYKKRIHKKLKTSN 191 >UniRef50_B2JQB0 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JQB0_BURP8 Length = 194 Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Query: 105 SKSIKPESLDDILGDILKKETTITSFLNMPT-LSLSRTESSMLRMWMAGQGTIQISDQMN 163 SK P+ L LG ++ T S L P ++LSR E+S+L + GQ ++I+ +N Sbjct: 99 SKLRGPDELLASLGLVMIGYTCFASELVEPAGVALSRRETSVLHRLIRGQSNVEIATSLN 158 Query: 164 IKAKTVSSHKGNIKRKI 180 + KTVS++K + +K+ Sbjct: 159 LSPKTVSTYKMRLMQKL 175 >UniRef50_B9XQH4 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B9XQH4_9BACT Length = 223 Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust. Identities = 45/174 (25%), Positives = 79/174 (45%), Gaps = 29/174 (16%) Query: 42 ACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNL 101 A ++ +P++V + D + +AS IK I NQH + +V ++H DE L + L Sbjct: 49 AINTLKPNLVLV--DISLGNASGIDLIKNIKNQHDDLPVLVV----SMH-DESLYAERAL 101 Query: 102 LISS----------KSIKPESLDDILGDILKKETTITSFLNM-----------PTLSLSR 140 + K+++ + GDI E +S L P LS Sbjct: 102 RAGAMGYVMKHEPAKTVRGAIYKVLGGDIYLSERMASSMLVKFMKGKTDEPLSPLEILSD 161 Query: 141 TESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK-QVIYHVVR 193 E + RM G+GT QI+++MN+ T++S + IK K+ + +V+ H ++ Sbjct: 162 RELEVFRMLGQGKGTRQIAEEMNLTIATINSFRARIKDKLHLKSSTEVMLHAIQ 215 >UniRef50_A6GLU5 Two-component response regulator n=1 Tax=Limnobacter sp. MED105 RepID=A6GLU5_9BURK Length = 218 Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust. Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 15/193 (7%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 +++D + R G L ++G K ++ + E + C + P ++ D + + Sbjct: 9 LLVDDHAVVRAGYRHLLETQGGFK-QVREAENAQEAYSTCQKELPGLIIC--DISMPEPV 65 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 ++ ++ + P F++F ++ + +KS +PE L +G++L Sbjct: 66 GLNLVQRVLGRWPEVKFLMFTMHNSIELARACMDAGAKGYVTKSSRPEVLLRAIGEVLAG 125 Query: 124 ETTITSFLN-MPTLS-----------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 T I++ L+ + LS LS E +L + +AGQ QI + + + AKT+ + Sbjct: 126 RTFISADLSRLMALSRLRDNRGGLDELSSREFEVLCLLVAGQSAEQIGELLFLSAKTIHN 185 Query: 172 HKGNIKRKIKTHN 184 IK+K++ N Sbjct: 186 IHYQIKKKLQVSN 198 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 40.8 bits (94), Expect = 0.030, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%) Query: 99 KNLLISSKSIKPESLDDILGDILKK-ETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQ 157 + +L + I PE D ++ D L+ S L++ LS E +L++ G G Sbjct: 117 QTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDL----LSDREKQVLKLVAEGHGNKA 172 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKT 182 +++++ I KTV HK N+KRK+ T Sbjct: 173 VAEKLCISHKTVEKHKANLKRKLGT 197 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Query: 127 ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 I N P LSR E ++LRM G + +I+ +NI +TV +H+ NIK K+ H+ Sbjct: 145 ILPVANKPN-PLSRREEAILRMVAQGCSSKKIATLLNISYRTVETHRQNIKHKLDIHS 201 >UniRef50_D0J422 Two component transcriptional regulator, LuxR n=3 Tax=Comamonas testosteroni RepID=D0J422_COMTE Length = 195 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 3/116 (2%) Query: 81 IVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKET-TITSFLNMPTLSLS 139 +V + N F Y + SI P IL I K F N L+ Sbjct: 77 VVGYLLKNSWFGSYSQAVLEVANGGASISPIVAKKILPKIFKYSALEEAPFENKKLEKLT 136 Query: 140 RTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK--IKTHNKQVIYHVVR 193 E +LR+ G+ T +I D M I A TVS+H NI RK ++T + V Y V++ Sbjct: 137 DREKEVLRLIAQGKRTHEIGDYMEISALTVSTHVKNIYRKMQVRTRAQAVRYAVLK 192 >UniRef50_C8WKQ2 Transcriptional regulator, LuxR family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WKQ2_EGGLE Length = 516 Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 34/58 (58%) Query: 135 TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 T LS E+ +L + M G+ ++S+ + + TV SH N+ RK+ HN+Q ++ +V Sbjct: 447 TYGLSNRETDVLELIMRGRDVARMSETLFVSENTVRSHCKNLYRKLDVHNRQQVFDLV 504 >UniRef50_A3ZMK7 Two-component system response regulator n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZMK7_9PLAN Length = 225 Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 5/67 (7%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTD 196 SL++ ES ++R+ +AG+ +I+DQ+ + +TV + +I RK+K K ++ + Sbjct: 139 SLTKEESHVMRLMLAGRTNQEIADQIQLSLRTVQFRRSSIFRKLKITTKSRLFDLA---- 194 Query: 197 NVTNGIF 203 VT G+ Sbjct: 195 -VTTGLL 200 >UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAW8_9FLAO Length = 212 Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust. Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%) Query: 134 PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 P SLS E + + + G G I+IS+++N+ TVS++K I +K+ N +VR Sbjct: 145 PLESLSEREKEIFDLLIQGYGNIEISNELNLHLSTVSTYKTRIYKKLNIKN---TVDLVR 201 Query: 194 LTD 196 L D Sbjct: 202 LGD 204 >UniRef50_A5FAM9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FAM9_FLAJ1 Length = 209 Score = 39.7 bits (91), Expect = 0.065, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 22/156 (14%) Query: 47 RPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSK 106 P VV + D + DAS + + P T FI+ + N DE + S Sbjct: 48 EPDVVLM--DIQLQDASGIDIVSKLTEAMPGTSFIMCTSFEN---DEKIFSALRAGASGY 102 Query: 107 SIKPESLDDILGDILK--KETTITSF--------------LNMPTLSL-SRTESSMLRMW 149 +K + LD I+ IL+ K SF + + +L+L + TE +L + Sbjct: 103 LVKGDPLDKIIQAILEAHKGGAPMSFTIAKRVLQHFQESKVQVQSLALLTVTEKEVLELL 162 Query: 150 MAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 G +I+D+ N+ T+ H GNI RK++ NK Sbjct: 163 AQGLLYKEIADKKNVTIDTIKKHIGNIYRKLQVSNK 198 >UniRef50_C7N3M6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N3M6_SLAHD Length = 512 Score = 39.7 bits (91), Expect = 0.067, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 28/48 (58%) Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 LSR E +LR G G+ +++D+M I TV +H N+ K+ H+K Sbjct: 452 LSRREKDVLRYLAMGYGSSKVADEMGISWNTVRTHTRNLYGKLDVHSK 499 >UniRef50_C6X5T9 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X5T9_FLAB3 Length = 221 Score = 39.7 bits (91), Expect = 0.069, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 131 LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 ++ P++ LS E ++++ AG +I+ + I TV +H+ NI RK +TH+ Sbjct: 150 ISYPSIKLSEREKQIVKLMFAGFTNTEIAAALFISISTVETHRKNIYRKTETHS 203 >UniRef50_B5HDX5 LuxR-family transcriptional regulator n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HDX5_STRPR Length = 584 Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust. Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 3/70 (4%) Query: 134 PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK---QVIYH 190 P L L+R E +LR+ AG G +I++++ I KT S H NI K+ + + H Sbjct: 511 PDLGLTRREQDVLRLVAAGHGNRRIAEELYISPKTASVHVSNILAKLGVSGRGEAAALAH 570 Query: 191 VVRLTDNVTN 200 +RL ++ + Sbjct: 571 RLRLFQDLPD 580 >UniRef50_C0YJ73 Transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJ73_9FLAO Length = 217 Score = 39.3 bits (90), Expect = 0.088, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 30/51 (58%) Query: 134 PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 P L++ E + ++ G G ++IS+ +NIK TVS+ K NI K+K N Sbjct: 153 PLSILTKRELQIAELYAEGYGNLEISNSLNIKQNTVSTIKKNIFEKLKIEN 203 >UniRef50_A6B1A6 DNA-binding HTH domain-containing protein n=7 Tax=Vibrio RepID=A6B1A6_VIBPA Length = 217 Score = 39.3 bits (90), Expect = 0.089, Method: Compositional matrix adjust. Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 15/175 (8%) Query: 20 LLSRGVKKREINDIETVDDLAIA-CDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNT 78 LL+RG ++N T D+ +A DS P + + + + ++ +++N PN Sbjct: 37 LLTRGA---DVNFPSTRDEHYVAIVDSSLPELPEVKQTLSKLEHVDA---TVLVNAEPNL 90 Query: 79 LFIVFMAIANVH--------FDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSF 130 + +N+ FD+ ++ K +L + + L+ ++G +L T+ Sbjct: 91 RIESLLTWSNLKGLFYFEDDFDKVMMGLKGILNGENWLSRDILNQLIGHLLSLNNTVGEL 150 Query: 131 LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 + L+R E +L G + I+D + + TV SH +I RK++ N+ Sbjct: 151 ETKLEMELTRREMQVLSALCQGGSNLDIADSLFVSEHTVKSHLYSIFRKLEVKNR 205 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust. Identities = 16/44 (36%), Positives = 29/44 (65%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 SL++ E +LR+ G +++ Q++I AKTV +H+ N+ RK+ Sbjct: 149 SLTQREREVLRLLAQGDSNREVAGQLSISAKTVETHRANVMRKL 192 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 39.3 bits (90), Expect = 0.095, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 1/58 (1%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK-QVIYHVVR 193 +L++ E +L+M G+ +I+ + KTV +HK N+ RK+ HNK Q++ + ++ Sbjct: 155 TLTKREREILKMLAEGKSVKEIAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQ 212 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D2TCX9 Colanic acid capsular biosynthesis activation pr... 232 7e-60 UniRef50_P20098 Colanic acid capsular biosynthesis activation pr... 229 6e-59 UniRef50_A8GD04 Transcriptional regulator, LuxR family n=2 Tax=S... 211 2e-53 UniRef50_C7BPK9 Colanic acid capsular biosynthesis activation pr... 198 7e-50 UniRef50_Q2NR13 Putative colanic acid capsular biosynthesis acti... 198 1e-49 UniRef50_A4TLT7 LuxR-family regulatory protein n=34 Tax=Enteroba... 198 1e-49 UniRef50_D2TYJ5 Colanic acid capsular biosynthesis activation pr... 196 3e-49 UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_B8KVU4 Transcriptional regulator, LuxR family protein n... 97 3e-19 Sequences not found previously or not previously below threshold: UniRef50_D0Z9D4 LuxR-family regulatory protein n=1 Tax=Edwardsie... 114 3e-24 UniRef50_C9Y197 Transcriptional regulatory protein entR n=2 Tax=... 87 4e-16 UniRef50_O69280 Transcriptional regulatory protein entR n=29 Tax... 87 4e-16 UniRef50_A8GBA0 Two component transcriptional regulator, LuxR fa... 82 1e-14 UniRef50_C4UMU0 Putative uncharacterized protein n=1 Tax=Yersini... 82 1e-14 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_D2R8T9 Two component transcriptional regulator, LuxR fa... 75 1e-12 UniRef50_B3RA82 Response regulator protein; Response regulator r... 74 3e-12 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 73 6e-12 UniRef50_D2SB03 Two component transcriptional regulator, LuxR fa... 71 2e-11 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_Q46SR4 Two component transcriptional regulator, LuxR fa... 70 5e-11 UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=... 69 7e-11 UniRef50_B1T1G9 Two component transcriptional regulator, LuxR fa... 69 8e-11 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 69 8e-11 UniRef50_UPI0001C3195F two component transcriptional regulator, ... 69 9e-11 UniRef50_Q5QUH5 Response regulator, LuxR family (CheY, HTH domai... 69 1e-10 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 69 1e-10 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 69 1e-10 UniRef50_Q1LR81 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudoma... 68 2e-10 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 68 2e-10 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 68 2e-10 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 67 3e-10 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 67 3e-10 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 67 3e-10 UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_B1ZTJ2 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 67 3e-10 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 67 3e-10 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 67 4e-10 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 67 4e-10 UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 ... 67 4e-10 UniRef50_C9P7K7 Two component transcriptional regulator LuxR fam... 66 6e-10 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 66 7e-10 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 66 8e-10 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 66 9e-10 UniRef50_Q2W107 Response regulator containing a CheY-like receiv... 66 9e-10 UniRef50_UPI0001B502CA two component LuxR family transcriptional... 66 9e-10 UniRef50_Q6MJE1 Two-component response regulator homolog n=1 Tax... 65 1e-09 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 65 1e-09 UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiob... 65 1e-09 UniRef50_C6BJ98 Two component transcriptional regulator, LuxR fa... 65 1e-09 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 65 1e-09 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_Q2W7W6 Response regulator n=2 Tax=Magnetospirillum RepI... 65 2e-09 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_B1FBA4 Two component transcriptional regulator, LuxR fa... 65 2e-09 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 64 2e-09 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 64 2e-09 UniRef50_C8XI28 Two component transcriptional regulator, LuxR fa... 64 2e-09 UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR fa... 64 2e-09 UniRef50_A3Z7P9 Two-component response regulator, CheY-like rece... 64 2e-09 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 64 2e-09 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_A9BC69 Response regulator containing a CheY-like receiv... 64 3e-09 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 64 3e-09 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 64 3e-09 UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=... 64 4e-09 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 64 4e-09 UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumonia... 64 4e-09 UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator rece... 64 4e-09 UniRef50_D1RZ92 Transcriptional regulatory protein n=1 Tax=Serra... 64 4e-09 UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR fa... 64 4e-09 UniRef50_A4XT64 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 64 4e-09 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 63 5e-09 UniRef50_C8WJU6 Transcriptional regulator, LuxR family n=1 Tax=E... 63 5e-09 UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa... 63 5e-09 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 63 6e-09 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 63 6e-09 UniRef50_A3TQ42 Regulatory protein, LuxR:Response regulator rece... 63 6e-09 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 63 6e-09 UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 63 7e-09 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 63 7e-09 UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL ... 63 7e-09 UniRef50_Q0G656 Two-component response regulator n=2 Tax=Auranti... 63 7e-09 UniRef50_D0WHJ3 Transcriptional regulator, LuxR family n=1 Tax=S... 63 8e-09 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 63 8e-09 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 63 8e-09 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 63 8e-09 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 63 8e-09 UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycet... 63 8e-09 UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 63 8e-09 UniRef50_A6F5J0 Response regulator containing a CheY-like receiv... 62 8e-09 UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n... 62 9e-09 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 62 9e-09 UniRef50_C6QBW3 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 62 1e-08 UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcani... 62 1e-08 UniRef50_D1ABX5 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_B4SJL0 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C4SVX3 Response regulator containing a CheY-like receiv... 62 1e-08 UniRef50_B1XWH3 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C6X139 DNA-binding response regulator, LuxR family n=1 ... 62 1e-08 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 62 1e-08 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 62 1e-08 UniRef50_Q04UI4 Receiver component of a two-component response r... 62 1e-08 UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellov... 62 1e-08 UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodo... 62 1e-08 UniRef50_C4RET4 Two-component system response regulator n=1 Tax=... 62 1e-08 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_Q12ET8 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_B0UG66 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_B4CV47 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 62 2e-08 UniRef50_A1VIF2 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC... 61 2e-08 UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 61 2e-08 UniRef50_Q3M2P3 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_UPI0001C31456 two component transcriptional regulator, ... 61 2e-08 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 61 2e-08 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 61 2e-08 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 61 2e-08 UniRef50_Q3JU73 DNA-binding response regulator n=55 Tax=Burkhold... 61 2e-08 UniRef50_C9P7J6 Two component transcriptional regulator LuxR fam... 61 2e-08 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 61 2e-08 UniRef50_B8EMC5 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 61 2e-08 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 61 2e-08 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 61 2e-08 UniRef50_Q842F8 Response regulator, two-component system n=8 Tax... 61 3e-08 UniRef50_A1TT54 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 61 3e-08 UniRef50_C1CZS0 Putative Transcriptional regulator, LuxR family ... 61 3e-08 UniRef50_Q47MK9 Regulatory protein, LuxR:Response regulator rece... 61 3e-08 UniRef50_C7N6Z5 Response regulator containing a CheY-like receiv... 61 3e-08 UniRef50_C7MLV1 Response regulator containing a CheY-like receiv... 61 3e-08 UniRef50_C4FXD5 Putative uncharacterized protein n=1 Tax=Catonel... 61 3e-08 UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 61 3e-08 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 60 3e-08 UniRef50_A3U430 DNA-binding response regulator, LuxR family prot... 60 3e-08 UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burne... 60 3e-08 UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator rece... 60 4e-08 UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_C4UJG9 Response regulator containing a CheY-like receiv... 60 4e-08 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 60 4e-08 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 60 4e-08 UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 60 4e-08 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_A7HS72 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 60 4e-08 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_UPI0001699909 response regulator n=1 Tax=Endoriftia per... 60 4e-08 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 60 4e-08 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 60 5e-08 UniRef50_C3K8H7 Putative two-component system, response regulato... 60 5e-08 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_A7BCY6 Putative uncharacterized protein n=1 Tax=Actinom... 60 5e-08 UniRef50_A3XF24 Two Component Transcriptional Regulator, LuxR fa... 60 5e-08 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 60 5e-08 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 60 5e-08 UniRef50_Q1MYT3 Response regulator containing a CheY-like receiv... 60 5e-08 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 60 5e-08 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 60 5e-08 UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 60 6e-08 UniRef50_P44845 Nitrate/nitrite response regulator protein homol... 60 6e-08 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 60 6e-08 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 60 7e-08 UniRef50_P56644 Probable transcriptional regulatory protein sgaR... 60 7e-08 UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agroba... 59 7e-08 UniRef50_D1SF65 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR fa... 59 7e-08 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 59 7e-08 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 59 7e-08 UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 ... 59 7e-08 UniRef50_D2R1Z1 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 59 7e-08 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 59 7e-08 UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=E... 59 8e-08 UniRef50_A4TWP7 Response regulator containing a CheY-like receiv... 59 8e-08 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 59 8e-08 UniRef50_B8HS28 Transcriptional regulator, LuxR family n=38 Tax=... 59 8e-08 UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 ... 59 8e-08 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 59 8e-08 UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Bu... 59 1e-07 UniRef50_A0K2K2 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q11LI0 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_C6P401 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_C2BHD6 Possible response regulator n=1 Tax=Anaerococcus... 59 1e-07 UniRef50_UPI0001C342BD hypothetical protein EcanA3_16147 n=1 Tax... 59 1e-07 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 59 1e-07 UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB... 59 1e-07 UniRef50_B8KRZ2 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_Q8DG77 Two-component response regulator n=1 Tax=Thermos... 59 1e-07 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 59 1e-07 UniRef50_C4UWZ6 LuxR-family transcriptional regulatory protein n... 59 1e-07 UniRef50_Q2T904 Capsula synthesis response regulator transcripti... 59 1e-07 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 59 1e-07 UniRef50_C5A924 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_A1T4U2 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=G... 59 1e-07 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_C0YMY4 Response regulator n=2 Tax=Chryseobacterium gleu... 59 1e-07 UniRef50_A4TWP9 Response regulator containing a CheY-like receiv... 59 1e-07 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 59 1e-07 UniRef50_C7RKP7 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 58 2e-07 UniRef50_A1BJU3 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_D0WI20 Transcriptional regulator, LuxR family n=1 Tax=S... 58 2e-07 UniRef50_Q0AL13 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9Q... 58 2e-07 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 58 2e-07 UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_Q391P2 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 58 2e-07 UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 ... 58 2e-07 UniRef50_B2IZX5 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=T... 58 2e-07 UniRef50_C1PE24 Two component transcriptional regulator, LuxR fa... 58 2e-07 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 58 2e-07 >UniRef50_D2TCX9 Colanic acid capsular biosynthesis activation protein A n=1 Tax=Erwinia pyrifoliae DSM 12163 RepID=D2TCX9_ERWPY Length = 229 Score = 232 bits (591), Expect = 7e-60, Method: Composition-based stats. Identities = 130/211 (61%), Positives = 167/211 (79%), Gaps = 4/211 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M TIIMD C+YTRLGLT Y+ +GVKK+ I+ I+ + L C +P VV INEDCFIH Sbjct: 19 MPTIIMDSCNYTRLGLTEYMTVKGVKKKNISLIDDIAQLQNKCQQLKPGVVLINEDCFIH 78 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ S+RI+ II QHP+TLF +FMAI+N+HF+EYL VR NL+I+SK+IK +LD +L D Sbjct: 79 ESDASERIRNIILQHPDTLFFIFMAISNIHFEEYLYVRNNLIITSKAIKISTLDSLLNDY 138 Query: 121 LKKETTIT----SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 +K++ ++ S + L+LS+TES+ML+MWM+G TIQISD+M IKAKTVSSHKGNI Sbjct: 139 FQKKSNLSVRHGSHSEVHPLTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNI 198 Query: 177 KRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR 207 KRKIKTHNKQVIYHVVRLTDNVT+GI+VN+R Sbjct: 199 KRKIKTHNKQVIYHVVRLTDNVTSGIYVNVR 229 >UniRef50_P20098 Colanic acid capsular biosynthesis activation protein A n=102 Tax=Enterobacteriaceae RepID=RCSA_ERWAM Length = 211 Score = 229 bits (583), Expect = 6e-59, Method: Composition-based stats. Identities = 127/211 (60%), Positives = 162/211 (76%), Gaps = 4/211 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M TIIMD C+YTRLGLT Y+ +GVKK+ I+ I + L C +P VV INEDCFIH Sbjct: 1 MPTIIMDSCNYTRLGLTEYMTVKGVKKKNISLINDIAQLQNKCQQLKPGVVLINEDCFIH 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ S+RI+ II QHP+TLF +FMAI+N+HF+EYL VR NL+I+SK+IK +LD +L Sbjct: 61 ESDASERIRKIILQHPDTLFFIFMAISNIHFEEYLYVRNNLIITSKAIKISTLDSLLNGY 120 Query: 121 LKKETTIT----SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 +K+ ++ + + +LS+TES+ML+MWM+G TIQISD+M IKAKTVSSHKGNI Sbjct: 121 FQKKLNLSVRHGTHSEVHPFTLSQTESNMLKMWMSGHDTIQISDKMQIKAKTVSSHKGNI 180 Query: 177 KRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR 207 KRKIKTHNKQVIYHVVRLTDNVT+GI+VN R Sbjct: 181 KRKIKTHNKQVIYHVVRLTDNVTSGIYVNER 211 >UniRef50_A8GD04 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GD04_SERP5 Length = 208 Score = 211 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 85/194 (43%), Gaps = 7/194 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D C +TR+G+ Y +I +++ + RPS + +N Sbjct: 1 MKLLVVDECCFTRVGIDNYFTDNVFA--QIKCCHSLEQATPLLEHYRPSHILVNLTKHCR 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +++ I P+ L +++ + + + + + + +K+ P +L + Sbjct: 59 HSEDDAQLQAFIEATPSALLFIYLDTPYPYSEAPMRIADHAFLFNKATLPVTLR-----M 113 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 ++++ ++ S E ++++ WMA +I+ ++ I + TV HK +I KI Sbjct: 114 MREKPVSLMDCSVEHSLFSPQELTVMKHWMAEMPNYRIAKKLQISSHTVYVHKRHITEKI 173 Query: 181 KTHNKQVIYHVVRL 194 N+ Y + + Sbjct: 174 NARNRLEFYSLYNV 187 >UniRef50_C7BPK9 Colanic acid capsular biosynthesis activation protein a n=4 Tax=Enterobacteriaceae RepID=C7BPK9_PHOAA Length = 200 Score = 198 bits (504), Expect = 7e-50, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 83/195 (42%), Gaps = 1/195 (0%) Query: 1 MSTIIMDLCSYTRLGLTGYLL-SRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFI 59 M ++++ C YTR G++ +L + ++ EI ++++ + P +V N + Sbjct: 1 MKILVVEECYYTRSGISEFLKKNDSIEDIEIVGFSSINEAINIINCFSPDIVLANLTHYC 60 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 H AS + + NT +++ + D Y+ ++ N + +K L+ + Sbjct: 61 HHASYCSNLHKFVTLLDNTRIYIYLDNPYPYCDNYITLKSNAFLLTKKNLSYLLNKLSKT 120 Query: 120 ILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 L++ ++ S E ++ WM QIS ++ I TV SHK +I K Sbjct: 121 TLQEIQQYREKIDECCSIFSPQEHKIINYWMKEVPNYQISQKLKISNSTVYSHKRHIAEK 180 Query: 180 IKTHNKQVIYHVVRL 194 I N+ + + + Sbjct: 181 INVRNRIELCFIYNV 195 >UniRef50_Q2NR13 Putative colanic acid capsular biosynthesis activation protein n=1 Tax=Sodalis glossinidius str. 'morsitans' RepID=Q2NR13_SODGM Length = 217 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 65/212 (30%), Positives = 114/212 (53%), Gaps = 12/212 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ I+D C +TR + LL+ G I + V L + C P +V I++ ++H Sbjct: 1 MTAFILDHCVFTRSAMRS-LLNEGDLGENIYTLNDVLKLDMLCQKLTPDIVIISQR-YMH 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 N + +K +I + P T FI+F+ N+ + + ++ N++++SK + D + Sbjct: 59 MQDNDRILKALIERLPRTFFIIFIGNENIVYKAIIPIKSNVIVTSKFLAV----DDFSKL 114 Query: 121 LKKETTITSFLNMP------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKG 174 L+ + + P L S+TE +L MWMAG+ T I +NIK KT+SSHK Sbjct: 115 LRHFSGQEKYPLAPTVKRCAPLRFSKTERQILAMWMAGENTKAICAHLNIKDKTLSSHKI 174 Query: 175 NIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNM 206 NIKRK NKQ+IY+++++ ++VT+ ++ + Sbjct: 175 NIKRKTNADNKQIIYYILKIAESVTDDLYAAL 206 >UniRef50_A4TLT7 LuxR-family regulatory protein n=34 Tax=Enterobacteriaceae RepID=A4TLT7_YERPP Length = 204 Score = 198 bits (503), Expect = 1e-49, Method: Composition-based stats. Identities = 43/208 (20%), Positives = 83/208 (39%), Gaps = 23/208 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D C YTR G+ YL S V ++ D+ TV++ +A +P ++ +N + Sbjct: 1 MKILIIDECFYTRSGVNTYLNS--VSSIKLMDVPTVEEATLAIQEFQPDIIIVNLTQYCR 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I+ +++ + + + ++ P L + + I Sbjct: 59 YGGHCPLLAQFIHYCTRAKVYIYLDASYPFSETPIP------LTESVSMPIPLTESVS-I 111 Query: 121 LKKETTITSFLNMPTLS--------------LSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L K+ +P S S E ++ WM +I+ ++NI Sbjct: 112 LAKKHLPNLLRRLPGFSLERLGIQPNQQASLFSPQEHKVMCYWMTEMPNYRIARKLNISG 171 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVVRL 194 TV SHK +I KIK N+ + + + Sbjct: 172 STVYSHKRHITEKIKVRNRLELCFIYNV 199 >UniRef50_D2TYJ5 Colanic acid capsular biosynthesis activation protein (LuxR-family transcriptional regulator) n=6 Tax=Enterobacteriaceae RepID=D2TYJ5_9ENTR Length = 199 Score = 196 bits (499), Expect = 3e-49, Method: Composition-based stats. Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 3/194 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D C YTRLG++ YL + K + +++ ++ P VV N + H Sbjct: 1 MKVLIIDECYYTRLGISEYL--SKINKLQFISQDSIKSAINHINNFSPDVVLANLTHYCH 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A +++ I + N F +++ + +L++ I SK I L+ ++ Sbjct: 59 HAEYCNQLQTFIEKLHNVRFYIYLDSPYPFTNRPILLKNQCFIMSKKILNYVLERLIETN 118 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 IT N S E +++ WM I+ ++ I TV SHK +I KI Sbjct: 119 -SILKNITYLSNDNASIFSYQEQKIIKNWMNAVPNHVIARKLGISNSTVYSHKRHITEKI 177 Query: 181 KTHNKQVIYHVVRL 194 +N+ ++ V + Sbjct: 178 FVNNRIELFFVYNI 191 >UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR Length = 194 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 79/189 (41%), Gaps = 9/189 (4%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D + L+ ++ + ++ +V D + D+ Sbjct: 4 LLLIDDHPLVEVALSAACVNSPI-PLQLFAAGDEAQARQLLQQHAMDLVI--LDIGLPDS 60 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + ++ + HP+ +++ A + H LL +L + +K +S+ +L IL Sbjct: 61 DGLELLRRLRVHHPDCPVLIYSAEQSRH---TLLRAASLGAAGYVVKSQSMAQLLSAILA 117 Query: 123 KETTITSFLNMPT---LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 +F ++P L L+ E ++ + G +QI++Q++I KTVS+HK NI K Sbjct: 118 VLGGQQAFPDLPERIDLPLTEKEQQIVALLARGLSNLQIAEQLHISNKTVSTHKKNILEK 177 Query: 180 IKTHNKQVI 188 + + Sbjct: 178 TGVQSVVEL 186 >UniRef50_D0Z9D4 LuxR-family regulatory protein n=1 Tax=Edwardsiella tarda EIB202 RepID=D0Z9D4_EDWTE Length = 199 Score = 114 bits (284), Expect = 3e-24, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 82/200 (41%), Gaps = 4/200 (2%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M ++++ C YTRLG++ ++ + K +N + T+D L + P ++F N + Sbjct: 1 MELLVLEPCRYTRLGISLFIQNE--KNINVNYVSTLDALIAGGMEKNPDIIFANLTPYCK 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ ++ + L +++N+ + +K + P L + Sbjct: 59 HDPLDLPLQAFFRYPQRATCFIYTQAHYPYTQLPLYLQRNIYLINKKMTPTLLRLLCCHA 118 Query: 121 LKKETTITSFLNMPTL--SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKR 178 ++ L+ E ++ WM +I+ ++ + +TV ++K + Sbjct: 119 PRQTPPAHLLEQRYGAWPLLTTREIMVMHDWMQQTPNHRIAQRLRLSPRTVYAYKRRLVE 178 Query: 179 KIKTHNKQVIYHVVRLTDNV 198 KI+ N+ + ++ L ++ Sbjct: 179 KIRVKNRIELCYLYNLIRHI 198 >UniRef50_B8KVU4 Transcriptional regulator, LuxR family protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KVU4_9GAMM Length = 248 Score = 97.1 bits (240), Expect = 3e-19, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 48/93 (51%), Gaps = 5/93 (5%) Query: 98 RKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQ 157 + LL ++P +D ++ +++IT M LSR E ++ + G ++ Sbjct: 157 ARELLSQHDPLQPGGVD-----VVDTDSSITMERRMKRFGLSRREKQVVELLRQGLSSLH 211 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 I+DQ+NI A+TV++H ++ K HN+ + + Sbjct: 212 IADQLNISARTVNNHLRSVYDKCGVHNRTALIY 244 >UniRef50_C9Y197 Transcriptional regulatory protein entR n=2 Tax=Cronobacter RepID=C9Y197_CROTZ Length = 201 Score = 87.1 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 4/191 (2%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGV--KKREINDIETVDDLAIACDSQRPSVVFINEDCFI 59 +++D C ++R GL +L + + + +P++V + F+ Sbjct: 3 KILLVDRCHFSRTGLESWLNHAEDFAAPFHVTATDHLLRARELLIQWQPNMVIADLHGFM 62 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAI-ANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 D + + I NT ++ + + D+Y + I++K+I L ++G Sbjct: 63 GDVHHVNQFSSIFAACGNTTRLILLQSGHSDVLDDYCSQQITWRIANKNIPLRELGQMIG 122 Query: 119 DILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKR 178 L T L+ E +L W G +I+ +M I KTV ++K NI+ Sbjct: 123 KALMSRP-PFGEPKTVTPLLTLREERILEWWSEGMSNEEIARKMGIAVKTVYTYKRNIRM 181 Query: 179 KIKTHNKQVIY 189 K+ N+ ++ Sbjct: 182 KLGADNRFSLF 192 >UniRef50_O69280 Transcriptional regulatory protein entR n=29 Tax=Enterobacteriaceae RepID=ECNR_CITFR Length = 199 Score = 87.1 bits (214), Expect = 4e-16, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 71/187 (37%), Gaps = 3/187 (1%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREI--NDIETVDDLAIACDSQRPSVVFINEDCF 58 + +++D C +TR G+ L G + I + +P +V + + F Sbjct: 2 LKILVIDRCHFTRTGIEALLNHSGRFSSSFLVSGINNLLLAKEHILQWKPHLVIADLNSF 61 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 I + +S I I+ + H + +K +L + Sbjct: 62 ISETHSSPPINPFFMSCGVIPLILLQSADRQHAPIAPSQSVAHSVLTKHTTLNTLSHTIQ 121 Query: 119 DILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKR 178 + L+ + N L L+ E +L MWM G I+ ++I KTV ++K NI+ Sbjct: 122 EALQVRPALEIPKNATPL-LTPQEEKVLSMWMDGVSNNAIAAALSIHGKTVYTYKRNIRM 180 Query: 179 KIKTHNK 185 K+ N+ Sbjct: 181 KLHLGNR 187 >UniRef50_A8GBA0 Two component transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=A8GBA0_SERP5 Length = 213 Score = 82.4 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 55/154 (35%), Gaps = 12/154 (7%) Query: 49 SVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSI 108 + D + Q +K I +P +++ A + Y + + Sbjct: 59 DFALVILDIGLPQVDGLQLLKKIRRHYPQQSILIYTAQEE---EIYARMAYAAGANGFVH 115 Query: 109 KPESLDDILGDILKKETTITSFLNM---------PTLSLSRTESSMLRMWMAGQGTIQIS 159 K L+ ++ I SF L+ E +L + G +QI+ Sbjct: 116 KGSRLEQLVLAIETVLAGELSFPAAAMAEETQPTEGSLLTPKELQILGLLSKGLSNLQIA 175 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 + ++I KTVS+HK NI RK N + V + Sbjct: 176 EMLSISNKTVSTHKKNILRKTGASNLLELVAVFK 209 >UniRef50_C4UMU0 Putative uncharacterized protein n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UMU0_YERRU Length = 179 Score = 82.1 bits (201), Expect = 1e-14, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 66/146 (45%), Gaps = 2/146 (1%) Query: 46 QRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISS 105 +P +V + ++ + N + ++ ++ + +V++ + +YLL R + + Sbjct: 25 WQPQLVIADLYSYVFETHNLKILESLLATCIPSKLLVYLHSPSPWLSQYLLDRGAWKVIT 84 Query: 106 KSIKPESLDDILGDIL-KKETTITSFLNMP-TLSLSRTESSMLRMWMAGQGTIQISDQMN 163 K L+ ++ L + + P S E S+L W+ G +I++ ++ Sbjct: 85 KKHNISQLEQLVSAALCNPMGSYSEHPLQPAPALFSDREESILNYWLEGWIDQRIANTLD 144 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIY 189 I KTV +HK NI+ K+ N+ +Y Sbjct: 145 INIKTVYTHKRNIRLKLGASNRLSLY 170 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 19/200 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + D + Q+P VV ++ + Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDF-EPVGDAADGQQAVNLIEQQQPDVVLLDLR--LP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + ++ PNT F+V DEY+ N + +K S +++ I Sbjct: 59 QLSGIEVMRHTRASAPNTRFLVL---TTYDTDEYIGPALNAGAAGYLLKDASPEEVFRAI 115 Query: 121 ---------LKKETTITSFLNMPTLS----LSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 L+ + T LS+ E +L++ + G+ I+ +NI Sbjct: 116 RSIYEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISEN 175 Query: 168 TVSSHKGNIKRKIKTHNKQV 187 T+ SH +I K+ ++ Sbjct: 176 TIKSHVSHIFSKLDVRSRAE 195 >UniRef50_D2R8T9 Two component transcriptional regulator, LuxR family n=4 Tax=Planctomycetales RepID=D2R8T9_9PLAN Length = 210 Score = 75.1 bits (183), Expect = 1e-12, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 78/204 (38%), Gaps = 24/204 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S ++ D R G+ LL VK I + + + RP VV D + Sbjct: 3 ISLLVADDHEVVRAGVAAMLLGSDVKV--IAEATSGNQAIEQAMKLRPDVVL--LDVRLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ I+++ P T ++F A N Y+ L + +K + D+L I Sbjct: 59 ETDGLEALERILDRSPQTKVVMFTAYDNP---TYIARAVALGAAGFLMKGSTKADVLSAI 115 Query: 121 LKKETTI-------------TSFLNMPTL----SLSRTESSMLRMWMAGQGTIQISDQMN 163 + T + T PT L+ E +LR G +I ++ Sbjct: 116 TRAHTGLPPENESLMGRVRNTMARRRPTYDEEIPLTNREVQVLRHVALGLSNREIGRSLD 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQV 187 I +TV H NI RK++ ++ Sbjct: 176 ISIETVKEHVQNILRKLEAGDRTE 199 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 74.0 bits (180), Expect = 3e-12, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 80/201 (39%), Gaps = 19/201 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + G+ L + G I +V++ + P +V D + Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTV-IGQAASVEEAIVLAGRHAPDLVVS--DIHMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 DA+ Q Q P+ I + EY+ L +++ +K +++ I Sbjct: 62 DANGLQLAARFAEQFPSVRVIALSMHKDP---EYVRRAFALGVAAYVLKEAPAHELVTAI 118 Query: 121 LKKETTITS---------FLNMPTLS----LSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 T + P S L+ E+++L++ G+ +I++++ + Sbjct: 119 RTVAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVR 178 Query: 168 TVSSHKGNIKRKIKTHNKQVI 188 TV +H+ +++RK++ + + Sbjct: 179 TVETHRLHLRRKLRVGGRAEL 199 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 73.2 bits (178), Expect = 6e-12, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 77/198 (38%), Gaps = 17/198 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G +L + + D + +D + P VV D + Sbjct: 6 IAVLVVDDHTLHRDGTRR-ILEQYDDVDVVGDAASGEDALAMVNRLHPRVVL--MDIRLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I +HP+T ++ A +EY+ ++ + K +++ + Sbjct: 63 GMNGIEATRRIRERHPDTRVLIVTA---YDDEEYVRGAFDVGAAGYLSKTAPGRELVEAV 119 Query: 121 LKKETT-----------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + + + P +L+ E ++LR+ G QI+ ++ I A+TV Sbjct: 120 RAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 170 SSHKGNIKRKIKTHNKQV 187 H I K+ ++ Sbjct: 180 ERHCDRIYGKLGVTSRTE 197 >UniRef50_D2SB03 Two component transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SB03_9ACTO Length = 248 Score = 71.3 bits (173), Expect = 2e-11, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 21/182 (11%) Query: 35 TVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEY 94 ++ + S P VV D + D I + P+ +V A + D Sbjct: 72 SIAEARNLMASAAPDVVL--LDHRLPDGDGVGAIAWLHAIRPSAKIVVLTATTS---DRV 126 Query: 95 LLVRKNLLISSKSIKPESLDDILG---------DILKKETTITSFLNMPTLS------LS 139 L+ + K + LDD++ ++ + + S L+ Sbjct: 127 LVAAMEAGAAGFIAKTQRLDDVIEGVRAAAQGESVVNVKLLTRLLPRLHRQSGGGGAVLT 186 Query: 140 RTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVT 199 E +L + G I+ Q+ I TV +H N+ K+ H+K + + + D + Sbjct: 187 EREREILDLLARGLSNADIAQQLTISVHTVRNHVANLSAKLGAHSKLEVLSIA-VRDGLV 245 Query: 200 NG 201 +G Sbjct: 246 DG 247 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 70.1 bits (170), Expect = 5e-11, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 70/193 (36%), Gaps = 17/193 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D G+ L S G + + + + + ++ P V+ ++ + + Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEV-VGAVSSGREAIARAEALVPDVILMDLN--MP 80 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D ++I + P ++ + EY+ + +K ++I I Sbjct: 81 DVGGLSATEIIQERCPEIRVLILSMHDSP---EYITTALSHGAVGYVLKDVQPEEIKTAI 137 Query: 121 LKKETTITSFLNMPTLSLSRT-----------ESSMLRMWMAGQGTIQISDQMNIKAKTV 169 SLS E ++L G+ +++ ++I +TV Sbjct: 138 DAVMRGEQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 170 SSHKGNIKRKIKT 182 +H+ NIKRK+ Sbjct: 198 ETHRKNIKRKLGI 210 >UniRef50_Q46SR4 Two component transcriptional regulator, LuxR family n=14 Tax=Burkholderiales RepID=Q46SR4_RALEJ Length = 232 Score = 70.1 bits (170), Expect = 5e-11, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 68/195 (34%), Gaps = 18/195 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I+D R+ L +L S+ + + + + P VV ++ D I Sbjct: 28 TILIVDDHPAVRVVLKTHL-SQVLGVTHVLEADNGQAAVEIVRQYAPDVVILDLD--IPR 84 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + I + P +V + + + + K + L +I+ + Sbjct: 85 INGLDVIPRLKAIQPGVRILVISGQDQ---NTFAPRARQAGANGYVSKTQELPEIVRCVE 141 Query: 122 KKETTITSFLNMPTL------------SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + ++ SLS E +++M G QI + + I KTV Sbjct: 142 SVLAGYSVMPDVDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTV 201 Query: 170 SSHKGNIKRKIKTHN 184 S+HK I K+ + Sbjct: 202 STHKTRIMEKLGARS 216 >UniRef50_Q7UVB4 Nitrate/nitrite regulatory protein narP n=1 Tax=Rhodopirellula baltica RepID=Q7UVB4_RHOBA Length = 210 Score = 69.3 bits (168), Expect = 7e-11, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 26/203 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRP-SVVFINEDCFIH 60 +I+D +RLG L G+ E+ A+ S P V D + Sbjct: 4 RLLIVDDHEVSRLGTLAALEGTGI---EVVAQADKAADALEIVSNTPLDTVL--LDIRME 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I HP+ ++F N Y+ L +K + ++ + Sbjct: 59 GGDGLNTLGRIKLDHPDLPILLFSGYDNP---TYVARAVALGACGYILKTAPVSRLIEAL 115 Query: 121 --------------LKKETTITSFLNMPT---LSLSRTESSMLRMWMAGQGTIQISDQMN 163 L++ T + M + L++ ES +LR G +I+ + Sbjct: 116 NLAFDGQQSWTREELRRVTGALATPRMNQDIDVPLTQRESEVLRQMALGLTNKEIAKMLG 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQ 186 I +TV H +I RK+ ++ Sbjct: 176 ISYETVKEHVQHILRKLGVSDRT 198 >UniRef50_B1T1G9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T1G9_9BURK Length = 204 Score = 69.3 bits (168), Expect = 8e-11, Method: Composition-based stats. Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 18/196 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D +L LT +L R V + + + C +P ++ ++ D + Sbjct: 1 MRVVIVDDHPTVQLALTS-ILERNVNLKVVGTASDGGEGLRLCRELKPDLLIVDID--LD 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL--- 117 I+ + + +VF + + L + K E + +L Sbjct: 58 GMDGIDLIQRVRIKDATVKILVFSG---YSAELFALRCHAAGANGYVNKSEDVTHVLSAA 114 Query: 118 GDILKKETTITSFLNMPTLS---------LSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 +L +N LS E ++LR G +I D +++ KT Sbjct: 115 NAVLAGFHCFPLDINAMASGSGPHAAFAMLSERELTVLRYLAKGLSNKEIGDSLSLSNKT 174 Query: 169 VSSHKGNIKRKIKTHN 184 +S+HK NI K+ N Sbjct: 175 ISTHKANILAKLGFTN 190 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 69.3 bits (168), Expect = 8e-11, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 66/176 (37%), Gaps = 20/176 (11%) Query: 38 DLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLV 97 S RP +V D + +K I + + +VF A + D Y + Sbjct: 38 SALNMILSLRPDIVI--LDVSLEKMDGLTVLKRIAQANLDVRVLVFTAQS---VDTYAMR 92 Query: 98 RKNLLISSKSIKPESLDDILGDILKKETTITSFL--NMPTL-------------SLSRTE 142 S K E L +L + F +MP +L+ E Sbjct: 93 CLQAGASGFVSKNEPLTKLLKAVDTIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRE 152 Query: 143 SSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 +L++ G ++I++++++ KTVS HK NI K+ + + ++ R + V Sbjct: 153 LEVLKLLAEGLTNLEIAEKLHLSNKTVSGHKINILSKLGVTSVVDLVNIARQNELV 208 >UniRef50_UPI0001C3195F two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3195F Length = 215 Score = 69.0 bits (167), Expect = 9e-11, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 68/205 (33%), Gaps = 29/205 (14%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I D + R GL L G+ D TV + P V ++ D + D Sbjct: 8 TVLIDDHTIF-RSGLRELLAEHGLVVEG--DAPTVAAGVQLVERCAPDVAIVDLD--LPD 62 Query: 62 ASNSQRIKLIINQHPNTLFIV--------------------FMAIANVHFDEYLLVRKNL 101 S I+ I P T +V ++ E ++ Sbjct: 63 GSGIDAIRRIAECAPGTAVLVLTVSEADDDLTDAVLAGGCGYLLKDAPI--ETIVAGVTA 120 Query: 102 LISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + + ++ + + ++ T+ LS E +LR+ G I+ + Sbjct: 121 VAAGDAVLSPRVAATMLARMRASGRQTAAR--ARAQLSPREQEVLRLVAGGMDNAAIAQE 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQ 186 + I TV +H +I K+ N+ Sbjct: 179 LFISPHTVKNHISSILTKLHVANRI 203 >UniRef50_Q5QUH5 Response regulator, LuxR family (CheY, HTH domains) n=2 Tax=Idiomarina RepID=Q5QUH5_IDILO Length = 207 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 20/207 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D + R GL L + + I + E+ + + ++F+ D + Sbjct: 1 MKVLIIDPQFFMRAGLIQILTNYA-NQPSIYEAESFEIAENYLSADDYDLIFLEMD--LP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 DA ++ + P T ++F ++ +L + S K S + I Sbjct: 58 DAEIRPALQRLKKVAPRTHIVLFTRPRSISEVRQVLAA---GVRSYLPKDSSAEQAKLAI 114 Query: 121 LKKETTITSFLNMPTLS------------LSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + P L+ LS + ++++ G +I++ + I T Sbjct: 115 RALLNGDRHIPDDPHLNEPRDKSSGAESFLSPRQLEIMQLLAQGLSNKEIANILGITEGT 174 Query: 169 VSSHKGNIKRKIKTHNKQV--IYHVVR 193 + H I + IK N+ +++++R Sbjct: 175 IRVHLSAIFKAIKVSNRTEATLWYLLR 201 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 69.0 bits (167), Expect = 1e-10, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 73/208 (35%), Gaps = 28/208 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD---SQRPSVVFINEDC 57 M +++D + R GL L RG I + V + + + RP VV D Sbjct: 1 MRVLLIDDHALFRFGLQELLERRG-----IEVVAAVGESSTGLERVAETRPDVVL--LDM 53 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVF---------MAIANVHFDEYLLVRKNL------- 101 + + + ++ + H + + + YLL Sbjct: 54 RMPGLNGLELLRRLRAAHQSMPIAMLTTSAEERDVIDSLQSGAQGYLLKDMEPDALIAAL 113 Query: 102 --LISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 ++ +++ L +L ++ E+T ++ L+ E +L GQ I+ Sbjct: 114 GEIVQGRTVVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIA 173 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 ++ I TV H I RK+ H++ Sbjct: 174 RELGISEGTVKLHVKAILRKLDVHSRVE 201 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 81/208 (38%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ L+ RGV + + + E D A D Q V+ D + Sbjct: 3 LNILLVDDHAIVRQGIRQLLIDRGVARD-VTEAENGGDAVAAVDKQEFDVIL--LDISLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + +K + + P T ++F + D+Y + + K + ++G I Sbjct: 60 DTNGIEVLKRLKRKLPRTPVLMF---SMYREDQYAVRALKAGAAGYLSKTVNAAQMIGAI 116 Query: 121 LKKETTITSFLN----------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + +P LS E L M +G+ I++ +++ Sbjct: 117 QQVAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSL 176 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTVS ++ + K++ N + V Sbjct: 177 SVKTVSVYRSRLLEKMRLSNNAELTFYV 204 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 22/171 (12%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFI-VFMAIANVHFDEYL 95 ++ + +P VV D + D S + +LI P T I + M E+L Sbjct: 18 EEAVELTKALKPDVVI--MDISLPDMSGIEATRLIKEAVPETRVIGLTMHEEEPFVLEFL 75 Query: 96 LVRKNLLISSK------------------SIKPESLDDILGDILKKETTITSFLNMPTLS 137 + I + + P ++ + + P Sbjct: 76 RAGADAYIVKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVGQPEEPC-P 134 Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 L+ E +L + G +I+ ++ I KTV +H+ N+ K+ H++ + Sbjct: 135 LTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRTEL 185 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 68.6 bits (166), Expect = 1e-10, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 24/187 (12%) Query: 19 YLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNT 78 +LL + + + + P V+ + D + DAS I+ + Q P+ Sbjct: 19 FLLETTENLTLVGSFASAREAQQSLPQCAPDVILV--DIGLPDASGLTLIRALRPQLPHA 76 Query: 79 LFIV---FMAIANVH------FDEYLLVRK---NLLISSKSI------KPESLDDILGDI 120 F+V F ++ YLL R +L+ + + + + ++ Sbjct: 77 EFLVLTVFDDNQHILEAIQAGASGYLLKRDLPEHLISAIRIVHQGGSWMSAGVARRALEL 136 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 + L+ E +L + G +I++++ + +TV +H +I RK+ Sbjct: 137 FRH----QLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSIETVRTHIRHIYRKL 192 Query: 181 KTHNKQV 187 + N+ Sbjct: 193 QARNRAE 199 >UniRef50_Q1LR81 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LR81_RALME Length = 207 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 41/200 (20%), Positives = 74/200 (37%), Gaps = 21/200 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D R + L+ + + L QRP +V ++ D D Sbjct: 4 ALVIDNHPGVRAAASAALMESMGFEEVRLATTATEALEELRTRQRPDLVMVDLDLG--DL 61 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 ++ +++ HP T +V ++ A+ + LL + K + I + Sbjct: 62 PGDAVVEEVVSHHPATRVLV-LSAASGAAERALLSGAH----GYVDKGNGIGGIEHAVRA 116 Query: 123 KETTITSFLN--------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + +F P L LSR E +++R AG IS + I KT Sbjct: 117 VMSGYAAFPLALLTTIRRAANAPADPILVLSRRELTVMRFLAAGHSNKAISVVLGISNKT 176 Query: 169 VSSHKGNIKRKIKTHNKQVI 188 VSSHK +I K+ + + Sbjct: 177 VSSHKASIMTKLGFRSLIDL 196 >UniRef50_Q3JL34 DNA-binding response regulator n=30 Tax=pseudomallei group RepID=Q3JL34_BURP1 Length = 223 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 22/209 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R G+ +L + +++ + + + C RP +V D + Sbjct: 9 RVLVVDSHPIVRDGI-EVVLGKAYAGIDVDGAADMAEASDRCGRDRPDLVL--LDVMLPG 65 Query: 62 ASNSQRIKLIINQHPNTLFIVF--MAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + I+ HP F+VF + D L+ K P+ + + Sbjct: 66 EDPLPAMGEILRAHPGLRFVVFTALGSEARAADAIRFGASGYLL--KWCSPDGIVQAIRR 123 Query: 120 ILKKETTITSFLNM--------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 ++ I L+ P L+R E +L++ G +I+ +NI Sbjct: 124 VMAGRVHIDPSLDEARVASAAGGRTLASPVDELTRREKQVLKLIADGMRNREIASLLNIS 183 Query: 166 AKTVSSHKGNIKRKIKTHN-KQVIYHVVR 193 KTV H+ + +K+ N VI+ R Sbjct: 184 PKTVDCHRQRLMQKLGARNVATVIHWAYR 212 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 68.2 bits (165), Expect = 2e-10, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 26/206 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I++D R G L + + + + + C RP VV ++ + Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEV-VGEASSGREAIELCRRLRPDVVVMDLA--MP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I +HP +V A+ + EY+L + +K L ++ + Sbjct: 68 GVDGLEATRRIKEEHPQVAVLVVTALEDP---EYMLEALKAGAAGYVLKSSPLPRVISAL 124 Query: 121 LKKETTITSFLNMPTLSL--------------------SRTESSMLRMWMAGQGTIQISD 160 + + + L + E +L + G+ +I+ Sbjct: 125 RRLLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAR 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQ 186 ++ I T SH NI RK+ ++ Sbjct: 185 ELVISRGTAKSHVQNIIRKLGVSDRT 210 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 14/194 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+GL + + D+E + A + RP VV ++ +H Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEV-VADVENGAEAIEAYRAHRPDVVVLDLR--MH 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S I+ + ++ N +V+ +N E + S +K +L+ +L I Sbjct: 67 GMSGVDAIRALRSEFGNVRVLVY---SNYAAGEEVYQALKAGASGFVVKEMALERLLEAI 123 Query: 121 LKKETTITSFLNMPTLS--------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 K + LS E +L++ G+ +I+ ++++ T H Sbjct: 124 RKVHAGEQYVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIH 183 Query: 173 KGNIKRKIKTHNKQ 186 NI K+ ++ Sbjct: 184 VANILTKLGVSDRT 197 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 79/208 (37%), Gaps = 29/208 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFIN 54 + +I+D + R GL L ++ DIE V + A RP VV Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQ-------EDIEVVGEAADGSGGIAMAQKMRPDVVL-- 54 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKS---IKP 110 D + + S + +K ++ P+ I+ M + E + + K+ + Sbjct: 55 LDISMPEMSGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLY 114 Query: 111 ESLDDILGDILKKETTITS----------FLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 +++ + + + +IT + LS E +L + AG +I++ Sbjct: 115 QAVRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAE 174 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 Q+ I KTV ++K I K+ + + Sbjct: 175 QLVISVKTVETYKYRIMEKLNCKKRSDL 202 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 67.8 bits (164), Expect = 2e-10, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 23/203 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L E + ++ LA RP VV D + Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGLA-LIKRSRPDVVL--LDIGMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + + NT F+AI + + L ++ + +K ++L I Sbjct: 61 NLDGIGLIRELRSTEQNTK---FVAITAFNDERKLSELSSVGVHGFVLKSSGRTELLSAI 117 Query: 121 LKKETTITS-FLNMPTLSL----------------SRTESSMLRMWMAGQGTIQISDQMN 163 + L L + E +L G ++IS +MN Sbjct: 118 RSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMN 177 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQ 186 + KTV +H +I +K+ ++ Sbjct: 178 LSEKTVKNHVSHILKKLDLRDRT 200 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 39/213 (18%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFIN 54 M +I+D R G+ L + D+E + + + +P +V Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT--------DLEVIGEASNGQEALELVPKLKPDLVL-- 50 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 D + + + + +P+ ++ D+ L +K + Sbjct: 51 MDINMPVLDGVEATRKLKQMYPDLKVVILTVSE---IDKDLFEAIKAGADGYLLKNLGPE 107 Query: 115 DILGDILKKETTITSFLNM--------------------PTLSLSRTESSMLRMWMAGQG 154 +++ + + ++ P LS E +LR+ G Sbjct: 108 ELVSSLRAAISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLT 167 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 +I+ ++ + TV +H +I K+ N+ Sbjct: 168 YKEIAAKLYVAESTVKNHMRHILEKLHLRNRSE 200 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 71/196 (36%), Gaps = 14/196 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+ D TR GL YL + + D+ + +P V D + Sbjct: 4 IRVILADDHPLTRQGLKAYLEREENVAL-VGEAADGDEAWKLIEELKPDVAL--LDIRMP 60 Query: 61 DASNSQRIKLIIN-QHPNTLFIV--FMAIANVHF------DEYLLVRKNLLISSKSIKPE 111 A + I + P ++ + + V ++L + K+I+ Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGAKGFVLKTTSAGALMKAIQTV 120 Query: 112 SLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + + D + ++ T +LS E +L G + +++ Q+ I +TV + Sbjct: 121 ATGSLFLD--SEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQT 178 Query: 172 HKGNIKRKIKTHNKQV 187 H ++ K+ HNK Sbjct: 179 HLASVYDKLGAHNKTE 194 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 67/209 (32%), Gaps = 28/209 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + +A A ++ P VV D + Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETL-PDVVL--LDVRMP 143 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I P+ I+ + L +K S+D++ I Sbjct: 144 KRTGIEACAAIKEVCPSAKIIMLTISDE---EADLYEAIKAGAMGYLLKEISIDEVAAAI 200 Query: 121 LKKETTITSFL----------------------NMPTLSLSRTESSMLRMWMAGQGTIQI 158 + +P L+ E +LR+ G I Sbjct: 201 RAVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDI 260 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 + Q+ I TV +H NI K++ H++ Sbjct: 261 AKQLFISENTVKNHVRNILEKLQLHSRME 289 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 33/209 (15%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFINEDC 57 ++ D R G+ L +++ D+E V + RP V+ D Sbjct: 1 MLADDHELVRDGIRARL-------QKVADLEVVGEATNGREALTLAHDLRPDVLL--MDV 51 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + + + P ++ N EY+ +K S +++ Sbjct: 52 SMPVMNGLEAATQMRKLLPEIAVLILSVYDNP---EYVRGVVQAGARGYILKDISAAEMI 108 Query: 118 GDILKKETTITSFLN---------------MPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 I + F + L+ E +L GQ +++ ++ Sbjct: 109 TAITSVASGGYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKEL 168 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 I +TV SH+ N++ K+ N +Y V Sbjct: 169 GISVRTVESHRLNLREKVGNKNAAQLYKV 197 >UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKQ4_MEIRU Length = 194 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 16/192 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R+GL L G + + + P V D + Sbjct: 1 MRLLIADDHPLFRMGLRAALEREGFAV--VAEAGDGQEAVKLGLELLPDGVL--LDVRMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLIS-----SKSIKPESLDD 115 +++ Q N L + F+E +LV++ SK + PE+L + Sbjct: 57 QMDGITATRMLREQRYNGLIALLTT-----FNEPVLVQQAAYAGADAYWSKELPPEALAE 111 Query: 116 ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 L + +P L+ E +L+ G T +I+ QM+I +TV H Sbjct: 112 RLRRLGLGLEPRLRAPELPR--LTAREQEVLQWMAQGLSTKEIARQMHISPETVKDHLLR 169 Query: 176 IKRKIKTHNKQV 187 + K++ N+ Sbjct: 170 LYEKLEARNRVE 181 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 66/201 (32%), Gaps = 27/201 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD------SQRPSVVFIN 54 + +I+D + RLGL + D+ V + A +P VV Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGE-------RDLTLVGEAANGTQCLEQYRKHQPDVV--T 55 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 D + A ++ + + P+ +V +E + K ++ Sbjct: 56 MDFRLPGADGAESTAHLRTEFPDARVVVLSVFEG---EEDIWRAVEAGAMGYVSKSAEVE 112 Query: 115 DILGDILKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 ++L I T F +L+ E +L +AG +I+ +++ Sbjct: 113 EVLEAIRCVVGGETYFPAPIASKLASRRTRDALTPREHQVLHHIVAGLSNKEIAAALHMS 172 Query: 166 AKTVSSHKGNIKRKIKTHNKQ 186 TV H N K+ ++ Sbjct: 173 EATVKLHISNTLAKLHVADRT 193 >UniRef50_B1ZTJ2 Two component transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTJ2_OPITP Length = 225 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 77/209 (36%), Gaps = 19/209 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREIN--DIETVDDLAIACDSQRPSVVFINEDCF 58 + +++D + R+GL L + G R + + ++V +P VV D Sbjct: 8 IRVLVVDDSALVRMGLRSVLGTHGAAARIVVAGEADSVASAVSETKRLKPDVVL--LDIR 65 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + D S + I +T ++ ++A + ++ K I P+ L + Sbjct: 66 LPDGSGLHACREIKRMDASTRVLILTSVATDELIQEAVMAGAQGYLMKEIDPDGLTRAIV 125 Query: 119 DILKKETTITSFLNMPTL---------------SLSRTESSMLRMWMAGQGTIQISDQMN 163 D ++ +T + L LS E +L + G ++++++ Sbjct: 126 DAFAGKSVLTPEITARVLQLLREGPPAAGDSLAVLSAQERRVLALVADGLTNKEVAEKLR 185 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + TV ++ ++ K++ + V Sbjct: 186 LSDNTVKNYLVSVFEKLQVKRRSQAAAVY 214 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 67.4 bits (163), Expect = 3e-10, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 29/207 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIAC-DSQRPSVVFINEDCFI 59 + +++D R G+ L S + AI C + +P V D + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTP--GIYVVGEAGNGREAIECFQTLQPDVTL--LDIHM 65 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + + + + +PNT ++ +E L S +K S + ++ Sbjct: 66 PVCNGLETARKMREANPNTKILMLTVSE---TEEMLFEAVKSGASGYVLKSVSPERLIEC 122 Query: 120 ILKKETTI-----------------TSFLNMPTLS----LSRTESSMLRMWMAGQGTIQI 158 + + T+ MP+ L+ E +L+ AG +I Sbjct: 123 VRQVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEI 182 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNK 185 + + I TV +H +I K+ N+ Sbjct: 183 ARALFISENTVRNHVRHILDKLHLSNR 209 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 67.0 bits (162), Expect = 3e-10, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 37/215 (17%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R G+ L + + + D+ + +P VV D + Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEV-VAEGSDGDEALALVERYKPDVVI--MDINMPH 94 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDE-YLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +I +P+T I+ ++H DE Y++ +K D ++ + Sbjct: 95 VNGVEATRQLIEAYPDTKVIIL----SIHDDESYVMHALQTGAMGYLLKEMDADALIEAV 150 Query: 121 -LKKETTITSFLNM----------------------------PTLSLSRTESSMLRMWMA 151 + E + P L+R E +L++ Sbjct: 151 RVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLAD 210 Query: 152 GQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 G+ I+D + I KTV +H NI +K+ +++ Sbjct: 211 GKSNKGIADALYISEKTVKNHVSNILQKLNVNDRT 245 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 67.0 bits (162), Expect = 4e-10, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 80/203 (39%), Gaps = 21/203 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQ---RPSVVFINEDC 57 +S +++D + R G L ++ D A A RP VV D Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNAD----VHVCGEAADAAQAYQRFCALRPDVVV--MDV 59 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + AS + ++ ++ + P+ ++F F L L +K+ P+ L + + Sbjct: 60 SLPGASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAV 119 Query: 118 GDILKK-------ETTITSFLNM-----PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 I ++ + + N P LS E +LR+ + G I++++ + Sbjct: 120 RTIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLS 179 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 KTV++H+ I++K N + Sbjct: 180 QKTVANHQSVIRQKFGADNGVQL 202 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 66.7 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+GL L+ + + ++ D +P VV ++ + Sbjct: 20 IRVLVVDDHPPMRVGLVA-LIRSQPGMDVVAEASDGEEAIEIYDDLQPDVVLMDLR--MP 76 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I I + P IV + +DE + S +K +++I + Sbjct: 77 GMGGVEAILAIRKKAPEARVIVL---STYDWDEDIHRALQSGAKSYLLKDMPIEEIASTV 133 Query: 121 LKKETTITSFLN---------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 TS L+ E +L + G+ +I+ + I TV S Sbjct: 134 RAVYAGDTSLPRSVAERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKS 193 Query: 172 HKGNIKRKIKTHNKQ 186 H + K++ ++ Sbjct: 194 HLKTLFAKLRVRDRT 208 >UniRef50_A4U0R2 DNA-binding response regulator, LuxR family n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U0R2_9PROT Length = 228 Score = 66.7 bits (161), Expect = 4e-10, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 80/209 (38%), Gaps = 26/209 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M ++ D R GL +L EI D + + ++ + PS+ I D + Sbjct: 1 MQILVADDHKLVRDGLKPFL-HELDASAEILDAANLGEA-LSVGATAPSLGLILLDLMMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMA------------------IANVHFDEYLLVRKNLL 102 + ++ + Q PN ++ I ++ L+ Sbjct: 59 GMDGLKGLESVRKQFPNVPVVIVSGFSTREHVVAAVQAGASGFIPKTVSGTAMVNALRLV 118 Query: 103 ISSKSIKPES--LDDILGDI----LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTI 156 +S + P S +D+ + L++ T T + P LSR ES +L + + G+ Sbjct: 119 LSGEKYLPSSSFFEDVTVHMPMMPLQQRPTRTGEIPAPFDKLSRRESEILALLVEGRTNK 178 Query: 157 QISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 +I+ + ++ T+ H N+ RKI N+ Sbjct: 179 EIAIALELQEITIKVHLRNVYRKIGAANR 207 >UniRef50_C9P7K7 Two component transcriptional regulator LuxR family n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P7K7_VIBME Length = 209 Score = 66.3 bits (160), Expect = 6e-10, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 16/202 (7%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + II+D + L+ L G + + D ++P+++ D I Sbjct: 6 TVIIVDDHPVIVMALSALLTQHGY--EVVATTDNGVDALNLTKLKKPNILL--LDIGIPM 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIA-NVHFDEYLLVRKNLLISSKSIKPESLDDI---- 116 + IK + N +V A N + + LL + +S + ++ + Sbjct: 62 LDGLEVIKRLENIDNPPKVLVLTAQPSNFYANRALLSGASGFLSKNADISYVIEALKAIS 121 Query: 117 -----LGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 D L + I ++ LS E ++ ++G +I+ +M + +KT+S+ Sbjct: 122 SGYKYFPDSLNFKQQIEKDNDL--SILSPRELTVFNYLVSGMPNKEIAKEMILSSKTIST 179 Query: 172 HKGNIKRKIKTHNKQVIYHVVR 193 +K I K+ N + H+ Sbjct: 180 YKNRILEKLNAKNIIELSHIAN 201 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 65.9 bits (159), Expect = 7e-10, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 75/201 (37%), Gaps = 17/201 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D S R GL L G + + + T + +++RP +V ++ + + Sbjct: 6 RVVLVDDHSLVRRGLAVLLRLDG-RHDVVGEAGTGEAAVPLIEAERPDLVILDLN--MPG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + ++ + + T +V H + + +K D++ I Sbjct: 63 IDGLETLRRVRAKGLTTRVLVLSMHDETHL---VGQALSAGADGYLLKDSMDDELFFAIE 119 Query: 122 KKETTITS-----------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 M +SL+ E +L++ G T +++ +NI T + Sbjct: 120 SVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTAT 179 Query: 171 SHKGNIKRKIKTHNKQVIYHV 191 H+ N+ +K+ HN+ + + Sbjct: 180 RHRANLMQKLNVHNQVELVRI 200 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 65.9 bits (159), Expect = 8e-10, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 26/207 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R L L +RGV + + ET + RP VV ++ + Sbjct: 1 MRVLIADDHALFRDSLRTLLEARGV--EVVGEAETGKEAVELARELRPDVVLMDLK--MP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD----- 115 ++I + P +V A + DE L K D Sbjct: 57 GMDGLAATRMISAEMPEVKVVVLTASED---DEDLFEAVKSGALGYMFKDVRSDQFFELL 113 Query: 116 -------------ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQ-GTIQISDQ 161 + +L++ + L+ E +L + + G +++++ Sbjct: 114 EAASRGEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAER 173 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + + TV H NI K+ N+ + Sbjct: 174 LILSENTVKYHLRNILDKLHLQNRTQV 200 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 65.9 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 23/204 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D R G L + + + E+ ++ + P V+ D + Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRV-VGEAESGEEAILKARQLMPDVIL--MDVSMP 71 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I + P +V + D Y+ + +K S D++LG + Sbjct: 72 GMNGIEATRAIKAERPGVGILVL---TSYDDDAYVFALLEAGAAGYLLKNASEDELLGAV 128 Query: 121 LKKETTITSF-----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 ++ P +LS E +LR+ G+ +I+ ++ Sbjct: 129 RAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQV 187 I +TV H NI K+ ++ Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTE 212 >UniRef50_Q2W107 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Magnetospirillum RepID=Q2W107_MAGSA Length = 214 Score = 65.9 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 72/208 (34%), Gaps = 31/208 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREIND---IETVDDLAIACDSQRPSVVFINEDC 57 + +++D R L L + + +T+ L +AC P V+ D Sbjct: 3 IRVMLVDDHRMFREALRAPLEAESDMEIVAEANSGADTLASLDLAC----PDVLV--LDI 56 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + D + + + I +HP+ + A+ + E +L +K D+++ Sbjct: 57 GLPDLNGIEVARTAIRRHPDLRIVALSGFADRIYIEEML---KAGAHGYVVKSSGADELV 113 Query: 118 GDILKKETTITSFLNM------------------PTLSLSRTESSMLRMWMAGQGTIQIS 159 I + P L + E +L + G + +I+ Sbjct: 114 SAIRAVAGGSSFLSPEATQVMLRHIQSDADTVAPPPSVLGKREREVLVLLAGGLRSAEIA 173 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 + I TV H+ NIK+K+ N+ Sbjct: 174 ASLGIAVGTVEVHRRNIKQKLGM-NRTA 200 >UniRef50_UPI0001B502CA two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502CA Length = 225 Score = 65.9 bits (159), Expect = 9e-10, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 27/207 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I++ GL L G + ++V + P V I+ + D Sbjct: 9 KVLIVEDHRVVAEGLWALLAEYGDLTV-VGWADSVAETVPMAKELTPDVALIDFR--LPD 65 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + I P+ ++ A A+ D LL +K S D+I I Sbjct: 66 GTGADAAAGIRAHDPSCAIVILSADAS---DSALLAAVEAGACGYLLKSASGDEIASAIR 122 Query: 122 KKETTITS------------FLNMPTL---------SLSRTESSMLRMWMAGQGTIQISD 160 T SL+R E +L + G +++ Sbjct: 123 SAAEGETLIPAGTLVEVLSRHRESARSTAEQTGRLESLTRREQEILTLMGQGLDNRAVAE 182 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQV 187 Q++I TV +H I K++ ++ Sbjct: 183 QLSISYATVRTHVRKILEKLEVRSQLE 209 >UniRef50_Q6MJE1 Two-component response regulator homolog n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MJE1_BDEBA Length = 226 Score = 65.5 bits (158), Expect = 1e-09, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 8/194 (4%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S I+D TR G+ L S K + + + TV S V ++ D + Sbjct: 25 VSFFIVDDHPVTRQGMRVALTSLSAKIQCLGEASTVGSAMQNLKSL--DVNYVVLDHLLP 82 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + + + P+ F++ + ++ SK + L+D + + Sbjct: 83 GQSGLELLTMAASARPDLKFMLVTQCEDAETLAQYQRLGVKVMLSKVSAMDVLEDAVKSL 142 Query: 121 LKKE----TTITSFLNMPTLS--LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKG 174 L+ + + + P L+ L+ E ++RM G+ +++ + T+ +HK Sbjct: 143 LEDKDYVCPALEKVMGEPRLTNVLTPRELEVVRMIAQGKTNKEVAACLECSEHTIKTHKT 202 Query: 175 NIKRKIKTHNKQVI 188 N+ RK+ N I Sbjct: 203 NVMRKLNLSNAVEI 216 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 33/212 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFIN 54 + ++ D + R G+ L ++ +IE V + RP V+ Sbjct: 5 IRVLLADDHALVRDGIRARLN-------KVPEIEVVGEATNGREAVKLAHELRPDVLL-- 55 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 D + + + + P ++ N EY+ +K S Sbjct: 56 MDVSMPVMNGLEAAAEVRKSFPEIAVLILSIYDN---SEYVRGVVQAGARGYILKDISAP 112 Query: 115 DILGDILKKETT---------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 +++ I + TS L+ E +L G +++ Sbjct: 113 EMITAISSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVA 172 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 + I +TV SH+ N++ K+ N +Y V Sbjct: 173 KSLGISVRTVESHRLNLREKVGNKNAAQLYKV 204 >UniRef50_Q67L26 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67L26_SYMTH Length = 224 Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 73/207 (35%), Gaps = 29/207 (14%) Query: 5 IMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASN 64 ++D R G+ L + + + L +A RP V+ D + + Sbjct: 1 MVDDHPLVRNGIRQVLSLEPDMEVVGEAGDDQEALRLA-QELRPDVIL--LDLALPRRTG 57 Query: 65 SQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD---------- 114 + + + + P T ++ A+ L KS+ PE+L Sbjct: 58 LELLPRLREELPETQVVILTYSASEQDAIAALQAGAAGYLVKSMAPEALAARIREAFRGD 117 Query: 115 -----DILGDILKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQI 158 ++ ++L+ +T + LS E+ +LR AG +I Sbjct: 118 VPVSGSVMRNVLRAMSTPSELPPPTPGGQPGAGEAAESLLSPREAQILRRIAAGNTNREI 177 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNK 185 ++Q+ + TV ++ +I K+ N+ Sbjct: 178 AEQLGLSENTVKNYVKSILAKLNLENR 204 >UniRef50_C6BJ98 Two component transcriptional regulator, LuxR family n=2 Tax=Ralstonia pickettii RepID=C6BJ98_RALP1 Length = 219 Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 18/202 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ +++D G++ L + + D + AC P+ V + Sbjct: 1 MNILVIDSLPLFAAGVSNVLNALDAQGV-FIDTHYTAQIGPACRQAEPTAVVMEWSA--E 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKS----IKPESLDDI 116 D QR+ + P ++ + H L + + + E+L I Sbjct: 58 DDDARQRLSELKAVLPEVPVLLTVQAVGRHVVGDALRFGAAGVVDRQATADVLLEALQRI 117 Query: 117 LGDILKKETTITSFLNMPTL-----------SLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + + P L+ + +L++ G+ QI +N+ Sbjct: 118 TSGAVYLPPISNLYPDDPRHTPGESPAEIWRRLTPRQHEVLQLLAEGKSNKQICRVLNVA 177 Query: 166 AKTVSSHKGNIKRKIKTHNKQV 187 T+ +H + R+I +N+ Sbjct: 178 EGTIKNHLYALFRQIGVNNRTE 199 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 13/201 (6%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL +L + + + D+ + P VV ++ + + Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSV-VAEARDGDEALALIAAHEPDVVLLDLN--MP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD- 119 + ++ + + IV ++ + K I P+SL + Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAAGFLYKDIDPDSLAQAIRSV 121 Query: 120 -----ILKKETTITSFLNMPT--LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 I +E P +L+ E +L + AG+ +I+ Q+++ KTV +H Sbjct: 122 ADGQVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTVKTH 181 Query: 173 KGNIKRKIKTHNKQ--VIYHV 191 ++ RK+ ++ +Y V Sbjct: 182 LSSLFRKLGVADRTQAALYAV 202 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 22/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+G++ L + I + ++ + + P VV D + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEV-IGEADSGEAAIRMVKALSPDVVL--LDVNMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + K + + ++++ + LL ++ K LD+++ I Sbjct: 59 NIGGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLL---KAGVNGYITKGTPLDEMIKAI 115 Query: 121 LKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K F + P LS E + M + Q QI+DQ+ + Sbjct: 116 KKVYQGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFV 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHV 191 KTV++++ I K+ + + H+ Sbjct: 176 SVKTVNTYRYRIFEKVGVDSDVKLTHL 202 >UniRef50_Q2W7W6 Response regulator n=2 Tax=Magnetospirillum RepID=Q2W7W6_MAGSA Length = 209 Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 12/148 (8%) Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + ++ + + IV+ N + L + K E + +L Sbjct: 64 MPYLDGRGVLQTLRTRVDAPRLIVYTGSPNP---DVPRQAMTLGAAGFCSKREPPEQLLD 120 Query: 119 DILKKETTITSFL--------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 I+ F + P L+ E +L G Q++ Q++I TV Sbjct: 121 TIIAVAAGRMVFPFIDVSSLASDPLAGLTPRERELLAALAGGLTNQQMAGQLDISLNTVK 180 Query: 171 SHKGNIKRKIKTHNK-QVIYHVVRLTDN 197 H N+ K+ N+ Q + ++ ++ Sbjct: 181 FHLKNLYDKLGVGNRAQAVAFYLKGRES 208 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 70/205 (34%), Gaps = 25/205 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D + R GL L G+ + + + P V+ D + Sbjct: 4 RVLLIDDHTLFREGLQELLKRHGI--DTVGAVGDGETGIDLARDLLPDVIL--LDMRMPA 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNL-------------------L 102 + + ++ + IV + + D +R + Sbjct: 60 MNGLEVLRRLRQAGLKMP-IVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEI 118 Query: 103 ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + K++ L +L +++ +++ + + P L+ E +L + GQ I+ + Sbjct: 119 LQGKTVVAPDLAQLLVRVVQGKSSSANEPS-PFDELTPREGEILALLAEGQSNKVIARNL 177 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQV 187 I TV H I RK+ H++ Sbjct: 178 GISDGTVKLHVKAILRKLGVHSRVE 202 >UniRef50_B1FBA4 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FBA4_9BURK Length = 204 Score = 64.7 bits (156), Expect = 2e-09, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 71/193 (36%), Gaps = 16/193 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D + L+ L + + + + +++P ++ ++ + + Sbjct: 3 KILLVDDHPIYLIALSTLLQQERIA-ENVAVAKDGESAWELYKTEQPDLMIVDLN--LPT 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S +K + + +VF + + + + + K E + +L + Sbjct: 60 LSGVDFVKRVRVSDSHVRILVFSSARTEVMAGKI---RAIGANGYVQKTEDISQMLNAVR 116 Query: 122 KKETTITSFLNMPTLSLS----------RTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + F + LS E ++L + G +I+D +++ KTVS+ Sbjct: 117 ATLSGFDCFPSAAGDPLSGSGRIAAALSPREITVLSYLVKGHSNQEIADLLHVSHKTVST 176 Query: 172 HKGNIKRKIKTHN 184 HK +I +K N Sbjct: 177 HKAHIFQKTGITN 189 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 28/210 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D S+ R L L + + + E C+ P +V ++ + + Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRV-VGLAEDGAQAVELCEELEPDLVLMDLE--MP 439 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD------ 114 + K I + P +V + + ++ KSI+ L Sbjct: 440 NMDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRSGADGYLLKSIESRELAETIRLV 499 Query: 115 ---------DILGDILKKETT----------ITSFLNMPTLSLSRTESSMLRMWMAGQGT 155 D+ +L + S + L++ E +L+M G Sbjct: 500 HRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQGMRY 559 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 I+ ++ + TV ++ + K+ N+ Sbjct: 560 KTIASKLYLSDGTVRNYASALYDKLGVRNR 589 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 37/204 (18%), Positives = 72/204 (35%), Gaps = 20/204 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++D R+GL + + I + RP +V D + Sbjct: 43 RIYVVDDHPLMRMGLRAMINGEPDMEV-IGEAADSATATAEIMKLRPDLVIA--DISLRG 99 Query: 62 ASNSQRIKLIINQHPNT-LFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD------ 114 S + IK + P + +V M +++ L + + + LD Sbjct: 100 NSGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVLDAIRRAR 159 Query: 115 --------DILGDILKKETTITSF--LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + +L + T + P SLS E ++ + G T +I+ ++ + Sbjct: 160 NGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAKLFL 219 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVI 188 KTV +H+ +IKRK+ N + Sbjct: 220 SIKTVETHRVHIKRKLNLANATQL 243 >UniRef50_C8XI28 Two component transcriptional regulator, LuxR family n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XI28_NAKMY Length = 212 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 20/197 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 II D + L L L+ RG++ I+ T+ D A + +P +V D + Sbjct: 1 MIIDDHQVFAEL-LGEVLVDRGLELVGIHS--TLADGMAAVGTVQPDLVV--LDHRLPGD 55 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + ++ + ++ P T ++ A LL + K + + ++L + Sbjct: 56 TGAGSVRALKSRSPRTRILMLTAADER---SVLLEAMDAGCDGFVTKRQHIGEVLAAVTA 112 Query: 123 KETT------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 I S P L+ ES +L++ AG+ Q + ++ I TV Sbjct: 113 VLRGDTPISPDMVGALIASRPRPPGGDLTPRESEVLQLVGAGRSNQQTARELGISVHTVR 172 Query: 171 SHKGNIKRKIKTHNKQV 187 +H +I K+ H++ Sbjct: 173 NHVQHILDKLGAHSQLE 189 >UniRef50_B9YZJ3 Two component transcriptional regulator, LuxR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZJ3_9NEIS Length = 217 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 67/203 (33%), Gaps = 19/203 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I D R + + S + EI + E++D A P++ D + Sbjct: 4 TVLIADDHPLFREAMRLVVSSALGEGSEIVECESLDAALDAVRR-NPAIELAMIDINMPG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMA------------------IANVHFDEYLLVRKNLLI 103 + + Q P IV A I + + N ++ Sbjct: 63 MDGLAGLARLRQQAPTLPVIVVSADERHSTVEAAMSVGASGFIPKSFSRDSMTEAVNAVL 122 Query: 104 SSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 P SL D + L L++ E +L + G+ ++ ++N Sbjct: 123 GGDIYLPPSLADRDTGVPGSSPEQLQDLASRLALLTKQERCVLDYIVGGKSNKVVAIELN 182 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQ 186 I TV +H I RK+K ++ Sbjct: 183 IAESTVKAHVSAILRKLKVSSRT 205 >UniRef50_A3Z7P9 Two-component response regulator, CheY-like receiver and wHTH DNA-binding domains n=1 Tax=Synechococcus sp. RS9917 RepID=A3Z7P9_9SYNE Length = 207 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 72/179 (40%), Gaps = 10/179 (5%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 ++ D + +L ++ L +G+ + T + AC +P ++ ++ + D Sbjct: 20 VVVEDQTMFLQLLVSMLQLQQGL--EVVATATTAAEGIAACLQHQPDLLILDLS--LPDQ 75 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + ++ HP IV A A+ ++ + + D LG + Sbjct: 76 GGEVVAEALVEFHPEARLIVLSAQAS----SFVCPASLQPMLHAVVDKIEAYDCLGAEIA 131 Query: 123 KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIK 181 + + + P L+R E +L AG QI+D+M++ TV +H+ N+ K+ Sbjct: 132 EL--LRAKAPAPLAKLTRREREVLSGIGAGLSNQQIADRMHLSVHTVETHRRNLSGKLG 188 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 64.3 bits (155), Expect = 2e-09, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 14/195 (7%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I D GL L + I + D+ +P ++ D + Sbjct: 9 TILIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLIL--LDINLPH 66 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + + P+ ++ + E L KS P+ L L ++ Sbjct: 67 RNGVDIARQLRREFPHVGVVIITMYSYQKLTEELRAVGVAGYLLKSASPDRLMTCLTSVV 126 Query: 122 KKETTITSFLN------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + N + SL+ E ++R+ G T QI++++ + A+T+ Sbjct: 127 SGKPFFDQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLFLSAETI 186 Query: 170 SSHKGNIKRKIKTHN 184 +H+ NI K+ ++ Sbjct: 187 KTHRKNIYFKLGINS 201 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 64.3 bits (155), Expect = 3e-09, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 27/208 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D + R G+ L + + +D +A+A RP VV D + Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVAGEAANAMDAVALA-QQLRPDVVL--MDIGMAG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S+ + +LI + P +F+++ ++YL ++ + +K D ++ I Sbjct: 62 MSSFEATRLIRKERPEVKV-IFLSM--YDDEDYLAECVDMGANGYILKDSPADQLITAIR 118 Query: 122 KKETTITSFL--------------------NMPTLS-LSRTESSMLRMWMAGQGTIQISD 160 + + + P L++ E +L+M G+ +I+ Sbjct: 119 EVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAA 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + KTV +HK N+ RK+ HNK + Sbjct: 179 FFELSVKTVEAHKFNLMRKLDIHNKAQL 206 >UniRef50_A9BC69 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Prochlorococcus marinus RepID=A9BC69_PROM4 Length = 193 Score = 64.0 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 71/188 (37%), Gaps = 15/188 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREI-----NDIETVDDLAIACDSQRPSVVFINE 55 M +I++ L L +L + + +V+ + P + Sbjct: 1 MDVLIVED----DLILLDFLTQEVSNQINVPERRVRKASSVERARYLISQKIPDWLL--L 54 Query: 56 DCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD 115 D + D S + + + ++ A A+ + L++ + +K+ L Sbjct: 55 DLHLPDGSGVELAEEFVQSKQKAKVLILTAQADQYALPASLLKNMHALINKADGLAPLRQ 114 Query: 116 ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 + +I ++ + +F N+ SL+ + L + G T QIS Q+NI T +H+ Sbjct: 115 AVWEICREFDS--TFPNL--SSLTPRQLEFLHLIGEGLDTAQISKQLNISFSTAQTHRRQ 170 Query: 176 IKRKIKTH 183 I RK+ Sbjct: 171 ITRKLGIK 178 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 64.0 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 70/198 (35%), Gaps = 21/198 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I+ D R G+ + + + E + + A +P VV D + Sbjct: 5 RIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYE-AISAIQRLQPDVVL--LDIAMPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S + + I PNT +V ++ E + ++ +K L ++L + Sbjct: 62 PSGIEVARTIRQFDPNTKILVLSSVDRP---EIIEQALAAGVNGYLLKDFVLAELLQALE 118 Query: 122 KKETTITSF----LNMPTLS-----------LSRTESSMLRMWMAGQGTIQISDQMNIKA 166 M S L+ ++ +LR+ +G+ T +I+ + I Sbjct: 119 MVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISP 178 Query: 167 KTVSSHKGNIKRKIKTHN 184 KTV H+ + +I H+ Sbjct: 179 KTVEFHRSRLMERIGVHD 196 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 64.0 bits (154), Expect = 3e-09, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 64/203 (31%), Gaps = 28/203 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFIN 54 + +I+D R G+ L + IE V + S P VV + Sbjct: 13 IRVLIVDDHPVVRSGMRTLLAASP-------CIEIVGEAGNGDEALALVGSTSPDVVLSD 65 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 + + HP+ ++ I D ++ + +K D Sbjct: 66 LRLGAGL-DGVGVTRAVRATHPDVAVLI---ITTFDHDADIVRAVEAGAAGYLLKDALPD 121 Query: 115 DILGDILKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 +I+ I T + LS E +L + G +I+ Q+ Sbjct: 122 EIIAAIRAAAVGETVLSAQLTQRVVETMRVGQRPLSEREREVLVLVGEGLSNDEIAKQLF 181 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQ 186 I TV +H ++ K++ ++ Sbjct: 182 ISRATVKTHLRHLFGKLEADSRT 204 >UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABN5_9GAMM Length = 222 Score = 64.0 bits (154), Expect = 4e-09, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 66/161 (40%), Gaps = 22/161 (13%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLL 96 + A ++RP ++F D + A ++ I + P+T ++F + + +L Sbjct: 54 LEAIAAIKAKRPGLLF--LDVSMPLAGGAEIIHDVRRWSPDTRIVIFTGVTSPSVLAGIL 111 Query: 97 VRKNLLISSKSIKPESLDDILGDILKKETTITSFLN--MPTLS-----------LSRTES 143 I SK D+L K I P L+ L+ E Sbjct: 112 EAGADAIFSKL-------SPARDMLAKLPLILMGERYVAPELTDIIRKGQQGETLTGRER 164 Query: 144 SMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 +L M + G+ +I+ ++NI KTV H+G++ K++ H+ Sbjct: 165 QVLNMIVMGKSNKEIAQELNISPKTVEKHRGSVMLKLEVHS 205 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 68/198 (34%), Gaps = 16/198 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L ++ + + D ++ + S RP +V ++ Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEV-VGDCGDPEEYRLLLKSARPDIVLMDLALG-G 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D P+T +VF D + + S +K + ++ I Sbjct: 60 DTDGVALTAHTRATSPSTAVLVF---TTYDSDADFVRSLDAGASGYLLKDSTPVELFAAI 116 Query: 121 LKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 ++ P SL+ E +L + G+ Q+ +++ + TV Sbjct: 117 RTARDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 170 SSHKGNIKRKIKTHNKQV 187 +H +I K+ + Sbjct: 177 KTHVNHIFTKLGVDTRAA 194 >UniRef50_Q9RLW5 Virulence protein A n=1 Tax=Klebsiella pneumoniae RepID=Q9RLW5_KLEPN Length = 207 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 20/200 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSR--GVKKREINDIETVDDLAIACDSQRPSVVFINEDCF 58 MS +I+D + RL L L ++ V +D + D +P +V ++ Sbjct: 8 MSAVIIDDHPFARLALKTVLENQNIVVTGEAADDFHAIQ----LVDRLQPDIVIVDV-ML 62 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 I + KL N + ++ +V N + + N IS K ES+D+ + Sbjct: 63 IGSSGIDVVTKLRQNHYAGSIVMVSGKNQNFYRKCSVDAGANAFISKK----ESMDNFVA 118 Query: 119 DILKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 I + F LSLS E ++R ++G I+ +MNI KTV Sbjct: 119 AIQAVQRGYYYFPLPSYNPTPAENKILSLSEQEIKIMRYIVSGAPNQNIAAEMNINPKTV 178 Query: 170 SSHKGNIKRKIKTHNKQVIY 189 S++K + K+ + ++ Sbjct: 179 STYKRRLMGKLNCKTLKDLF 198 >UniRef50_Q0EZ33 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZ33_9PROT Length = 217 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 75/204 (36%), Gaps = 16/204 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ ++D R+G YLL + + + + + P +V D + Sbjct: 7 ITVQLVDDHEVVRIGFR-YLLEADDLMQVVAESASGKQACRDYEKWLPDIVI--MDISLP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLI---SSKSIKPES----- 112 D S + ++ I+ HP ++ + + + + + + S + + Sbjct: 64 DISGLEVMRRILLAHPEARILMLSMHSGMVAERAMQMGARGFVCKRSGARLLISAIHEVM 123 Query: 113 -----LDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 LDD G L + + L SL+R E + + G+ I+ +++ K Sbjct: 124 AGRRYLDDETGVQLPLLHSASETLKPLPSSLTRRELEVCLLLTDGRSVSDIAAALHLSEK 183 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHV 191 TV SH+ +I K+ + V Sbjct: 184 TVYSHRQHIMEKLGVATMAELVQV 207 >UniRef50_D1RZ92 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RZ92_SEROD Length = 210 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 75/194 (38%), Gaps = 11/194 (5%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D G+ YL + K ++ P ++ I D ++ + Sbjct: 6 ALVVDDHPLVASGIANYLNTHCRFKHAYVVTNETHCYRHILENGAPRLMVI--DFWLSEG 63 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + +K + NQ+ F+V N + + K+ PE + + +++ Sbjct: 64 TALKLLKELKNQYSKIRFLVVSGDENNEIWQKVRDAGGHGFVFKNEPPELFAEAVSALME 123 Query: 123 ---------KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 +E + ++ +L+ + +L M M G +I+ Q++I TV H Sbjct: 124 NKKWFPLEHEECVNNAHGHLQKFNLTPRQIDVLIMMMRGFPNKRIAAQLSISEPTVKEHI 183 Query: 174 GNIKRKIKTHNKQV 187 NI +KI +++ Sbjct: 184 SNILKKIGVNSRVE 197 >UniRef50_Q3SG39 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SG39_THIDA Length = 221 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 69/204 (33%), Gaps = 24/204 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I++D + R GL L G + D++A+ + RP V+ ++ + + Sbjct: 5 RIILVDDHTLFRKGLAELLEQSGEIEVTAFTGNP-DEVAMLLKAHRPDVLILDLN--MPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 ++ + N ++ ++ L + +K D+++ IL Sbjct: 62 TDGITLMQQLRNAGFALPILILTLSE---TEDDLARALRAGANGYLLKSMEPDEVVDAIL 118 Query: 122 KKETTITSFLNMPTL------------------SLSRTESSMLRMWMAGQGTIQISDQMN 163 + + T T +L+ E +L G+ I+ ++ Sbjct: 119 RAQRGETVVAPAMTAKLVKLYDQKGQDAGSLLDALTPREREILSHLSRGESNKAIARTLD 178 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQV 187 I TV H +I K+ ++ Sbjct: 179 ISHDTVKLHVRHILAKLNLSSRVE 202 >UniRef50_A4XT64 Two component transcriptional regulator, LuxR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XT64_PSEMY Length = 203 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 57/162 (35%), Gaps = 5/162 (3%) Query: 26 KKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMA 85 + +I+ + + Q ++ ++ + D + ++ + + +T + A Sbjct: 36 RDLQIDTAQNAAEAEQRLQQQTYDLILLDLR--LPDEPGLELLQRWLARGESTPVAILSA 93 Query: 86 IANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSM 145 + + L L KS ++L + +L ET T L+ + + Sbjct: 94 SDSAVDAQAALAAGALGFIPKSADGKALRQAVTRVLLGETLPAPSS---TSPLTPRQLEI 150 Query: 146 LRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 L++ G IS Q+ + TV +H + H + Sbjct: 151 LQLLAEGLPNKAISRQLGLAEDTVKTHLKALFETFAVHTRTA 192 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 19/198 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + L +L G + + + + + SVV ++ + Sbjct: 19 LRVLIIDDHALLGESLARFL---GSNDMQAVWCGDLVEAMQSIRDRSWSVVLLDLS--MP 73 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + +K I HP+ ++ F L +K P+ L + + + Sbjct: 74 RGNGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALRGGAAGYLTKGCSPDVLVEAIQKV 133 Query: 121 --------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L P LS E + + G+ Q++D+++I Sbjct: 134 VHGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISC 193 Query: 167 KTVSSHKGNIKRKIKTHN 184 KTVS+HK + K+ N Sbjct: 194 KTVSTHKTRLMHKLALDN 211 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 63.6 bits (153), Expect = 4e-09, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 81/222 (36%), Gaps = 32/222 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L S K I + + ++ + P VV + + + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKI-IGEGSSAEEGLVLISEHEPDVVLTDLN--LP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I Q+PN ++ + L SK I P++L +L + Sbjct: 62 NMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRV 121 Query: 121 LKKE-------------------------TTITSFLNMPTLSLSR---TESSMLRMWMAG 152 + E T I + ++ S E +L +G Sbjct: 122 ARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASG 181 Query: 153 QGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK-QVIYHVVR 193 I+D + I +TV +H +I RK+ +++ Q + + +R Sbjct: 182 ATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALR 223 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 75/209 (35%), Gaps = 28/209 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R G+ L+ R + + + + +P + D + D Sbjct: 5 RVLIVDDHPLFREGVKS-LVERSANYQAVGEAGCGAEALALAQELKPD--LVTMDVSLPD 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG--- 118 S + ++ I++ P T + M FD Y+ +K + ++ Sbjct: 62 MSGIEVVRGILDLAPETR--ILMLSMYPKFD-YVAEAFKAGAKGYVVKETTTARLIQGFD 118 Query: 119 ---------------DILKKETT----ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 D++ K + + L+ E +LR+ G T QI+ Sbjct: 119 ALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIA 178 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + + KTV +H+ N+ +K+ H+K + Sbjct: 179 AAIELSPKTVENHRTNLMKKLDVHSKMEL 207 >UniRef50_C8WJU6 Transcriptional regulator, LuxR family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WJU6_EGGLE Length = 507 Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 3/93 (3%) Query: 96 LVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGT 155 V ++ +++P D + + LS E + +W+ G G+ Sbjct: 410 PVSSGSGVAGSAVEP---ADASLVPVAADVGARIEALAKAYQLSPREKEVFALWVTGHGS 466 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 I ++ I TV +H +I K HN+ + Sbjct: 467 KYIQEKFVISPATVKTHVRHIYEKCDVHNRAEL 499 >UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3 Tax=bacterium Ellin514 RepID=B9XH34_9BACT Length = 226 Score = 63.2 bits (152), Expect = 5e-09, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 60/205 (29%), Gaps = 27/205 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I++ + R L ++ R + + ++ + S P VV D + Sbjct: 18 KIAIVEDNATLRQYLAEFVAGAP-GNRCVCACGSAEEALVKIPSLNPDVVL--MDIHLPG 74 Query: 62 ASNSQRIKLIINQHPNTLFI---VFMAIANVHF----------------DEYLLVRKNLL 102 S + + PN I V+ + E L + Sbjct: 75 ESGIVCTARLREKLPNLQVIMLTVYKDTKMIFQALKAGACGYVLKRSDDKEILEAIAEVR 134 Query: 103 ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + E ++ + T LS E +L + G +I ++ Sbjct: 135 AGGAPMTSEIARMVVRSFIADTPE-----KDETGQLSGREQEILALLAEGLSNKEIGSKL 189 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQV 187 NI TV +H +I K+ + Sbjct: 190 NISFTTVRTHLMHIYEKLHVRCRTE 214 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 63.2 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 27/205 (13%), Positives = 65/205 (31%), Gaps = 24/205 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL G + + + P VV ++ + Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDLR--MP 68 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + + P +V + +L + +K +D++ + Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVL---TTYDTESDVLPAIEAGATGYLLKDAPREDLIRAV 125 Query: 121 ------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + + T + P +L+ E +LR+ +G + + ++ Sbjct: 126 RAAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKL 185 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQV 187 I TV +H + K ++ Sbjct: 186 FISEATVKTHLLHAYAKFGVRDRAA 210 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 63.2 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 78/192 (40%), Gaps = 11/192 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G LL + + ++ + ++ + AC +R VV D + Sbjct: 10 LTLLLVDDHAVVRAGYRR-LLEQASRCWQVTEADSGESAYRACARERFDVVV--MDISLP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + + + P ++F F E L +KS PE L + + I Sbjct: 67 GISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRI 126 Query: 121 LKKETTITSFLNMPT--------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + + SLS E + R+ G G+ +I+ +NI KTV+++ Sbjct: 127 AAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVANY 186 Query: 173 KGNIKRKIKTHN 184 I+ K+ +N Sbjct: 187 GSGIREKLALNN 198 >UniRef50_A3TQ42 Regulatory protein, LuxR:Response regulator receiver n=2 Tax=Janibacter sp. HTCC2649 RepID=A3TQ42_9MICO Length = 218 Score = 63.2 bits (152), Expect = 6e-09, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R G+ L + ++ ++ C P+VV Sbjct: 1 MRIVIADDHELYRSGMLTVLGDEPDIDI-VAEVGSLPAAVAKCVDLDPNVVI--LGHRPP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL--- 117 S + + I ++ P T ++ + + L+ S +K I+ Sbjct: 58 RHSGIEACRAISDRAPRTKSLILTGSGD---EGDLVEAMAAGASGYLLKDFPAQQIIESL 114 Query: 118 ---------------GDILKKETTITSFLNMPTLS-LSRTESSMLRMWMAGQGTIQISDQ 161 ++++ + T LS E +L++ G+G +I+ Q Sbjct: 115 RLAHRGQALIPLGMSSQLIRELSQPRQTPGESTTPRLSDRELGVLQLVGQGKGNKEIAAQ 174 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + I TV +H NI+ K+ ++ + Sbjct: 175 LFISQNTVKNHIQNIRNKLNVGSRIEL 201 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 62.8 bits (151), Expect = 6e-09, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 77/203 (37%), Gaps = 21/203 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL LL + I + ++ + P V+ ++ + Sbjct: 5 IRIMLVDDHEVVRSGLRR-LLEQNDGVEVIAEADSGEQAYQFYGEHMPDVIVMDMS--MP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ II ++P I+F N F L + K + DD++ + Sbjct: 62 GMGGLEALRRIIARYPQARVIIFSMHENAAFASQAL---GAGARAYVAKSGAADDLVQAV 118 Query: 121 LKKETTITSFL---------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + PT LS E + R+ AG+G +IS + I Sbjct: 119 REVAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 KTV++++ +K+K+ + + Sbjct: 179 QKTVANYQTLLKQKLGITSPIEL 201 >UniRef50_C7M1Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M1Y7_ACIFD Length = 222 Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 19/196 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GLT L G + + +V + D P VV + + Sbjct: 5 IRVVLVDDHPIVRRGLTASLERAGDVAV-VGEAASVSEARAVIDRVAPDVVLCDLR--LA 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRK--NLLISSKSIKPESLDDILG 118 D + I + + +V +++ LVR +K + + Sbjct: 62 DGDGVRLIAWLSVRGTGAPLVV------TAYEDPYLVRSAVEAGARGYVLKDATEAVLHD 115 Query: 119 DILKKETTITSFLNM--------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + + +F+ + + LS E +L + G+ ++I++ + I TV Sbjct: 116 AVRRVARGGIAFVGVGDVAGVLGSDVVLSDRERQVLELVARGRTNVEIAEALAISEATVK 175 Query: 171 SHKGNIKRKIKTHNKQ 186 +H ++ K+ N+ Sbjct: 176 THLAHVFDKVGATNRT 191 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 22/203 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D R GLT L + + + V+ + P VV D + Sbjct: 1 MLVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVE-GTNLAATAAPDVVL--LDIRMPKR 57 Query: 63 SNSQRIKLIINQHPNTLFIVF--MAIANVHFDE-------YLLVRKNL---------LIS 104 S + I P+ I+ ++ YLL ++ + Sbjct: 58 SGIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGASGYLLKDSSIEEVAQAVRVVAD 117 Query: 105 SKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 +S+ S+ L D K+ + ++P L L+ E +LR+ G +I+ ++ I Sbjct: 118 GQSLISPSMAVKLIDEFKQMSRPERD-HVPGLRLTERELEVLRLVAKGMNNREIAKELFI 176 Query: 165 KAKTVSSHKGNIKRKIKTHNKQV 187 TV +H NI K++ H++ Sbjct: 177 SENTVKNHVRNILEKLQLHSRME 199 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 71/196 (36%), Gaps = 15/196 (7%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D R G+ L K + ++ + D P +V ++ + + Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHF-PDLVLLDLN--MPR 61 Query: 62 ASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 IK I P ++ + + E + I K +KPE L + + Sbjct: 62 MGGITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGAEGYIQ-KDVKPEELKRAIDKV 120 Query: 121 LKKE-----TTITSFLNM-----PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 +K + +T + LS E +L + G QI+ ++ I KTV Sbjct: 121 IKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKTVK 180 Query: 171 SHKGNIKRKIKTHNKQ 186 +H NI RK+ +++ Sbjct: 181 NHVSNILRKLSVNDRT 196 >UniRef50_B6IT53 Nitrate/nitrite response regulator protein NarL n=1 Tax=Rhodospirillum centenum SW RepID=B6IT53_RHOCS Length = 228 Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 66/205 (32%), Gaps = 25/205 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ ++D R GL LL K + + +A +P ++ ++ Sbjct: 4 VTAFLIDANKLFREGLKR-LLDESPFKIVAEASNVREGVTVADQGLKPDLILLDLVNG-- 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ ++ + PN+ +V L +K S D + + Sbjct: 61 GEEEAEAMRRLRQALPNSRMVVLTTD---LCTRRLSNALEAGADGYLMKDLSSDALTQSL 117 Query: 121 LKKETTITSFL-----------------NMPTL--SLSRTESSMLRMWMAGQGTIQISDQ 161 F MP LS+ E +LR + G I++ Sbjct: 118 RLVMMGEKVFPTHLAALLISGRVNGNGLEMPVSRKGLSQREIQILRCLLNGDSNKMIANH 177 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQ 186 +NI TV H ++ RKI N+ Sbjct: 178 LNITEATVKVHLKSLLRKINASNRT 202 >UniRef50_Q0G656 Two-component response regulator n=2 Tax=Aurantimonadaceae RepID=Q0G656_9RHIZ Length = 213 Score = 62.8 bits (151), Expect = 7e-09, Method: Composition-based stats. Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 19/195 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D + R G+ + + GV E + ET + RP + D + Sbjct: 1 MKILIVDDHTVVRDGVKRLVDTLGVS--EFGEAETPSEALNEFRRLRPDITV--LDINLK 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + S + ++ + P +VF +++ + K D++L I Sbjct: 57 NGSGLEVLRRLKADTPAAKIVVFSMYSDIAYAASARRE---GALGYVAKSAPSDELLVAI 113 Query: 121 LKKETTITSFLNMPTLS------------LSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 K T LSR E +L+M G +I+D + I KT Sbjct: 114 EKALEGKTYTDTETAALMSEQPQNAGLDLLSRRELQILQMLGEGNSLSEIADGLGIAYKT 173 Query: 169 VSSHKGNIKRKIKTH 183 ++ +K K+ Sbjct: 174 AANTATKLKEKLGLD 188 >UniRef50_D0WHJ3 Transcriptional regulator, LuxR family n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WHJ3_9ACTN Length = 532 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 29/61 (47%) Query: 133 MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + LSR E + +W+ G G I + + I TV SH NI RK THN+ I + Sbjct: 466 VDAYGLSRRERDVFELWVTGHGLKHIENALYISEATVKSHLRNIYRKCDTHNRAEIIDLY 525 Query: 193 R 193 Sbjct: 526 E 526 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 27/194 (13%), Positives = 63/194 (32%), Gaps = 15/194 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + P VV ++ + Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNV-VGEAGNAGEAVTQFRKHHPDVVLMDLR--LP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A+ + + + P+ ++F +E + +K + +++L I Sbjct: 64 GANGTAATADLRREWPDARVLMFTTFDG---EEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L S E +L++ G+ +I+ + I +TV Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKR 180 Query: 172 HKGNIKRKIKTHNK 185 H N+ K+ ++ Sbjct: 181 HASNLFVKMGVADR 194 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 34/213 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D + R+ L L G ++ T + A P VV ++ + Sbjct: 1 MRLLLVDDHTLLRVALGDMLSQHGY---QVEHAGTEIEALSALAKSPPDVVLLDLR--MP 55 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +K I ++ ++ + + LL + +K +++ + Sbjct: 56 GSGGLEVLKRIRSRDSELPVVMLTSSDE---ERDLLQALQAGANGYLVKDAEPAELIQGL 112 Query: 121 LKKETTIT--------------------------SFLNMPTLSLSRTESSMLRMWMAGQG 154 K T S P +L+ E +L + Sbjct: 113 EKVLAGQTAVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPREREILMHVARAES 172 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 I+ ++ + TV H +I RK+ ++ Sbjct: 173 NKVIARELGVSDGTVKLHIKSILRKLGVKSRVE 205 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 18/195 (9%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D R GL L ++ + + + ++ +P VV ++ + Sbjct: 10 VLVVDDHPLLRDGLAALLGAQPDLRL-LGEAADGEEAIACYQRLQPDVVLMDLQ--MPRL 66 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + I I P IV + + VR +S + + L L D ++ Sbjct: 67 DGVEAIVRIRALDPRARIIVL----TTYRGDVRAVRALQAGASAYLLKDMLRHELVDTIR 122 Query: 123 KETTITSFLNMPTL-----------SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 P + LS E+ +LR G +I ++M I +TV + Sbjct: 123 MVAGGRRAPIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVKA 182 Query: 172 HKGNIKRKIKTHNKQ 186 H ++ K+ ++ Sbjct: 183 HMKSLMDKLGVGDRT 197 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 71/197 (36%), Gaps = 19/197 (9%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D + R GL+G + + G + + + P VV ++ + Sbjct: 4 VLVVDDHALMRTGLSGLIAAAGDMRV-VGTAADGAEAVEEVARLAPHVVLMDLS--MPVL 60 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + I+ +HP+ +V + ++ + ++ + +K D+L I Sbjct: 61 DGVAATRRIVEEHPSVEVLVLTSFSDR---QRVIEALDAGAGGYVLKDTEPADLLAAIRS 117 Query: 123 KETTIT-SFLNMPTLSL------------SRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + + L + E +L + G QI+ ++ I+ TV Sbjct: 118 TARGHSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRESTV 177 Query: 170 SSHKGNIKRKIKTHNKQ 186 +H ++ ++I ++ Sbjct: 178 KAHLTSVFQRIGVRDRT 194 >UniRef50_D0L5W2 Response regulator receiver n=36 Tax=Actinomycetales RepID=D0L5W2_GORB4 Length = 216 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 70/206 (33%), Gaps = 25/206 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L G + + V + RP VV D + Sbjct: 6 VRVMVVDDHPMWRDGVARDLADEGF--DVVATADGVRAATSRAAAVRPDVVL--MDMQMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + ++ P +V A + +L + +K +++ + Sbjct: 62 DGTGATATAELLKVCPEAHVLVLSASDER---DDVLDAIKAGATGYLVKSAQRSELVAAV 118 Query: 121 LKKETTIT------------SFLNMPTLS------LSRTESSMLRMWMAGQGTIQISDQM 162 + + L+ E+ +LR G + QI++++ Sbjct: 119 HATADGQAVFTPGLAGLVLGEYRRIARSPGPETPVLTERETQVLREVAKGLSSRQIANRL 178 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVI 188 I +TV +H G RK++ N+ + Sbjct: 179 AISPRTVENHVGATLRKLQLANRVEL 204 >UniRef50_B5JLG5 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JLG5_9BACT Length = 225 Score = 62.8 bits (151), Expect = 8e-09, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 62/158 (39%), Gaps = 21/158 (13%) Query: 43 CDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL 102 C +P +V D + + S ++ ++ + P +VF A+ + + Sbjct: 56 CIKLKPEIVI--LDVGLPELSGTEVLRGLTLHVPGVKVLVFSGRAS---SANIRELLSAG 110 Query: 103 ISSKSIKPESLDDILGDI-----------LKKETTITSFLNMP-----TLSLSRTESSML 146 K + D+ + K + + S + P + LS E +L Sbjct: 111 AQGYVDKMDGFDEFKKALDIISGGGTFIGPKMASVMRSLILNPDAASSEIPLSDREKQIL 170 Query: 147 RMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHN 184 ++ T +I+ ++NI +TV +H+ NI RK+ H+ Sbjct: 171 QLVAESFSTKEIASRLNISVRTVDNHRTNIMRKLNLHD 208 >UniRef50_A6F5J0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Marinobacter algicola DG893 RepID=A6F5J0_9ALTE Length = 220 Score = 62.4 bits (150), Expect = 8e-09, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 68/192 (35%), Gaps = 12/192 (6%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D + G+T L + RE+ + +V D S RP + D + Sbjct: 24 RVLIVDDHPFFLFGITAILEQENLA-REVATVASVADAVDDLRS-RPETSLVLLDLTLQG 81 Query: 62 ASNSQRIKLIINQ-HPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + P ++ ++ ++ + + ++ K ++ + Sbjct: 82 EAGLSLFSELEQIGLPVSVVVI----SSREDEASVRAARSAGAVGFLPKSAGRRSLVRMV 137 Query: 121 LKKETTITSFLNMPTLSLSR-----TESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 + + + ++P SLS + +L + G +I +++ TV +H Sbjct: 138 QRVSNGLLFYPSLPFPSLSPEHLTPRQLEVLTLLADGLPNKRICQALDLTEHTVKTHLKA 197 Query: 176 IKRKIKTHNKQV 187 I + HN+ Sbjct: 198 IFTHLDVHNRTE 209 >UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3 Length = 212 Score = 62.4 bits (150), Expect = 9e-09, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 76/203 (37%), Gaps = 22/203 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINED-CFI 59 + I+D R G+ L + + + ++ DLA + + +P V+ + C Sbjct: 4 IKVYIVDDYYLIREGVKKSLKQNSEIEI-VGESNSLSDLATSIKTSQPDVLIFELNLCQQ 62 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + +K + + F++ + L++ ++ K S +++L Sbjct: 63 PIRDLIENLKKV---NARVKFLIISDCD---CELPLVMAVRAGVTGFVRKNVSKEELLHA 116 Query: 120 ILKKETTITSFLNMPT--------------LSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + T +++ T S E +LR G+ QI+D + I Sbjct: 117 VQQVYTNKEYYVSDVTQVLLKGFLANQTSDSIFSDRELEVLRYICKGRSNEQIADILFIS 176 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 KT+++H+ NI +K + Sbjct: 177 EKTIATHRRNIMKKAGVKKSTEL 199 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 62.4 bits (150), Expect = 9e-09, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 20/204 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLS----RGVKKREINDIETVDDLAIACDSQRPSVVFINED 56 + +++D R GL L V + D V+ + + +V ++ Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLMDLQ 63 Query: 57 CFIHDAS--NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 +++IK +P ++ D +L S +K + Sbjct: 64 MGSGMDGVTATEKIKAGEGGNPPPPVLIL---TTYDTDADILAAVEAGASGYMLKDAPPE 120 Query: 115 DILGDILKKETTITSF-----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 I +L T+ + P+ +LS E +L + G ++ Q+ Sbjct: 121 QIRQAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAKQLF 180 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQV 187 I TV +H +I K+ N+ Sbjct: 181 ISEATVKTHLVHIYSKLGVDNRTA 204 >UniRef50_C6QBW3 Two component transcriptional regulator, LuxR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QBW3_9RHIZ Length = 206 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 21/205 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ ++++ LG L + D T+ + RP V+ IN + Sbjct: 1 MNLLVVESHPIVVLGYRSILEENP--ALTLYDARTIVEARPMIAKLRPDVIIINAQ--LP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D S + I+ + Q ++F + + ++ + K S D+I + Sbjct: 57 DGSGFEFIRRLTTQRSKLRSLIFSMRDDPYL---VMRAIDCGAKGFFSKRSSSDEIRSAV 113 Query: 121 --------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 +++ +R E ++L + + G + QI+ ++NI + Sbjct: 114 DAVGNGKTWIGEELIQQIAFTRIAQQKFHSRFTRREKNVLNLLLNGCSSTQIATELNISS 173 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHV 191 VS +++K+ + + Sbjct: 174 TLVSVDCAAMRKKLNARTTAEMLAI 198 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 28/213 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKR--EINDIETVDDLAIACDSQRPSVVFINEDCF 58 + +++D ++ R + L E + + V + AC RP + D Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNVVGEASSGDGVLEKVEAC---RPDCIL--MDIN 59 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + + + +L+ +PN +VF DEYL+ +K S + ++ Sbjct: 60 LPGKNGIEATELVKKNYPNCRVLVF---TMYEHDEYLMDALQAGADGYLLKDSSSEQVVA 116 Query: 119 DI-----------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 I L + L+ E +L + G +I++ Sbjct: 117 AIRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEA 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNK-QVIYHVVR 193 + I KTV H I +K+ ++ Q + + VR Sbjct: 177 LYISDKTVKIHINKIFKKLNVKSRSQAVIYAVR 209 >UniRef50_Q0VLI2 Transcription regulator, putative n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VLI2_ALCBS Length = 203 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 15/197 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D L+ L + I E L P + D + Sbjct: 1 MKILIVDDHPLFADALSITL-KNAYAEAMITTCEQPKWLLDN-RQFLPLYDLVILDQTMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 LI +V A + + L ++ K ES++ IL I Sbjct: 59 HLDGLTLWSLIGRLVGGAKVLVCSGSA---TEATVRRAVQLKVNGFVDKSESVEQILFAI 115 Query: 121 LKKETTITSFLN----------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + + F L+L+R + ++L M G G +I+ Q+ + T+ Sbjct: 116 REIMAGRSYFSESFRLMAGAAPEEALTLTRQQLAILTMLQEGHGNKEIARQLFVSVNTIK 175 Query: 171 SHKGNIKRKIKTHNKQV 187 +H + K+ N+ Sbjct: 176 THLRLLYEKLDVPNRTA 192 >UniRef50_D1ABX5 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ABX5_THECD Length = 201 Score = 62.4 bits (150), Expect = 1e-08, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 11/202 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++M+ S R G+ L + + ++ + L P + + + Sbjct: 2 IRVLVMEELSLLRGGIVALLDGQTDFMV-VGAVDNAEQLVPMARKAAPDIALLGMEGA-- 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + P+ ++ A K P++L L + Sbjct: 59 HSHTFALTGMLRQEVPDCAAVLMADRARPGDLRRAAAVGAAGFLLKGTSPDTLAGSLRRV 118 Query: 121 LKKETTITSFLNMPTL-----SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 E I + L L L+ E +LR+ G QI+D + + TV +H Sbjct: 119 AAGERVIDADLAFAELAAADSPLTPRELEVLRLAGEGASVAQIADTLVLTIGTVRNHLSR 178 Query: 176 IKRKIKTHNKQVIYHVVRLTDN 197 I RKI N+ H +R+ ++ Sbjct: 179 INRKIGARNRV---HAIRIAES 197 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 23/171 (13%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIV---FMAIANVHF-- 91 D+ + P VV ++ + + + I +HP T +V F ++ Sbjct: 34 DEAVALVAEKAPDVVLMDLR--MPRCDGVEATRRIRKEHPRTQVVVLTTFADDDSLFTAL 91 Query: 92 --------------DEYLLVRKNLLISSKSIKPESLDDILGDIL--KKETTITSFLNMPT 135 +E + ++ + P+ +L + + + + Sbjct: 92 QAGARGYLTKDARGEEIVQAIDAVMSGEAGLSPKVQRRLLERVTGSETVPAPCALPSELP 151 Query: 136 LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 L+ E+ +L + G +I+ +++ A TV +H N+ K ++ Sbjct: 152 DGLTPREAEVLVLIAEGLSNREIARALHVSAATVKTHINNLFAKTGARDRT 202 >UniRef50_B4SJL0 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SJL0_STRM5 Length = 224 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 76/210 (36%), Gaps = 25/210 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I D R L V +I++ +++D + + Q+ ++ D + Sbjct: 3 TLLIADDHPLFRAALHRA-AEEAVADLQISEADSLDSVLEVLEHQQIDLML--LDLHMPG 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDI---LG 118 + I P I+ A + + +L + K L+++ L Sbjct: 60 NHGLAGLATIRALQPGLAIIIVSANEEP---QVIRRAVDLGAAGYLPKSSGLNELQSALQ 116 Query: 119 DILKKETTITSFLNMPTL----------------SLSRTESSMLRMWMAGQGTIQISDQM 162 +L+ E I + L P SLS + +L + G QI+D++ Sbjct: 117 SVLEGERWIPALLREPVARVAPFSKDADLAARLASLSAHQYKVLSLVAEGLLNKQIADRL 176 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ +TV +H I ++ N+ V+ Sbjct: 177 GVQLRTVKAHMTRIMERLGVRNRAQAIRVL 206 >UniRef50_A6TKJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridiaceae RepID=A6TKJ8_ALKMQ Length = 205 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 72/211 (34%), Gaps = 19/211 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D R G+ L EI + E +++ P + I+ + Sbjct: 1 MRILIVDDHPLVRKGIASILFLEKDVH-EIKEAENIEEAIDMMAKFSPEITLIDLNLG-- 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + T FIV + + E L + + +K +DIL + Sbjct: 58 RQDGLEIVNKARAKGMATKFIVLTSSSKR---EDFLRAREAGVDGYILKEAFAEDILYAL 114 Query: 121 L-----------KKETTITSFLNMPTLS--LSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + TS + + L+ E +L G +I Q+ I Sbjct: 115 RIVLRGKKFIDPEVIQYQTSDIRENSHLDELTPRERDVLTELGKGLSNFEIGKQLFISEH 174 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 TV H NI K++ +++ V + N+ Sbjct: 175 TVKKHVSNILSKLELNHRTQAALFVNNSINI 205 >UniRef50_C4SVX3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Yersinia RepID=C4SVX3_YERFR Length = 218 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 73/191 (38%), Gaps = 10/191 (5%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR--PSV--VFINEDCF 58 II C +TR L +L + + + +V L D+ P+V +N Sbjct: 6 AIIQHPCFFTRFTL-ERILKKLLMSESVKIAASVSSLTDCYDNLVKFPAVHLAILNLRGE 64 Query: 59 IHDASNSQRIKL--IINQHPNTLFIVFMAIANVHF-DEYLLVRKNLLISSKSIKPESLDD 115 + + +S + + + Q P+ IV V+ +Y + + + L Sbjct: 65 DYTSGDSLSLVVDWLRIQRPHCRVIVIADEFCVYLLKQYFYGVEQVYAV--IAQNAPLSQ 122 Query: 116 ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 + + + + LS+ E ++L + + G+ I+D + + KTVS HK + Sbjct: 123 FVAQLNRVFSNSPELSKKRPCILSKRERTVLALLLQGKSNNDIADHLQLSNKTVSYHKRS 182 Query: 176 IKRKIKTHNKQ 186 K+ + Q Sbjct: 183 ALGKLGINTLQ 193 >UniRef50_B1XWH3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWH3_LEPCP Length = 219 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D S R GLT L+++ E+ D+ ++D A P + I D + Sbjct: 1 MKALLVDDHSLFREGLT-MLMAQRFPAVELFDVGDLNDAE-AVLGTEPGIELILLDLGLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHF---------DEYLLVRKNLLISSKSI--- 108 D+ ++ + + P +V A ++ + ++ Sbjct: 59 DSQGLDSLQRLRSVVPEVPIVVMSADERPETILAAIDQGAAGFIPKTARIGAIESALRVV 118 Query: 109 ------KPESLDDILGDILKKETTITSF--LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 P+ + + L + M +L L+ + +LR+ GQ QIS Sbjct: 119 LDGGIFLPQGIYRSIAPPLADGPEVDEAQAALMQSLGLTPRQLDVLRLMALGQSNKQISR 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 +++ T+ +H + R++ ++ + Sbjct: 179 ALSVAESTIKTHVAVVFRRLDVTSRSQV 206 >UniRef50_C6X139 DNA-binding response regulator, LuxR family n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X139_FLAB3 Length = 216 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 16/204 (7%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 ++ D R GL+ ++++ EI T++D+ + + D D + Sbjct: 9 LLGDDHQIVRQGLS-FVINDLFPNSEIKHAPTLNDVLLKAQVGPIDIAV--LDAQFPDGN 65 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + IK + P ++F + HF L SK + ++ L +++ Sbjct: 66 SISIIKKLRELQPAVKILIFTSSEEEHFALRFLREGANGFLSKLSEESEIETALAEMVNN 125 Query: 124 -------------ETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 E+ + P L+ E + + G G +++++ ++++ TVS Sbjct: 126 GNYLPPLTRQMLAESAVNPENTDPLSKLTDRELEVADLLAQGLGNLEVANHLDLRQNTVS 185 Query: 171 SHKGNIKRKIKTHNKQVIYHVVRL 194 + K I K+ N ++R+ Sbjct: 186 TFKKRIFSKLNVENMVDFIELMRI 209 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 62.0 bits (149), Expect = 1e-08, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 24/199 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R L ++++ I D + + +S RP +V ++ Sbjct: 1 MKLLIADDHAVVRSALK-FMINAQKDMEVIGDAADGTEAFLFIESNRPDIVLMDLSM-PP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I P T I+ + Y+ +K S + +L I Sbjct: 59 GENGLLTTKRITEAFPETKVILLTMHDE---EAYITQALQAGAQGYIMKNSSEELLLDAI 115 Query: 121 LKKETTI--------------TSFLNMPTL-----SLSRTESSMLRMWMAGQGTIQISDQ 161 LS+ E +L + G G +I+++ Sbjct: 116 RSVMGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAER 175 Query: 162 MNIKAKTVSSHKGNIKRKI 180 + I AKTV HK +I +K+ Sbjct: 176 LFISAKTVEVHKSHIMKKL 194 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 29/199 (14%), Positives = 67/199 (33%), Gaps = 16/199 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL +L + + + + ++ + RP V+ D + Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEV-VGEASDGEEGIARAEELRPDVIL--MDIKMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + ++ + L K I P++L + + Sbjct: 65 GTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSV 124 Query: 121 LK---------KETTITSFLNMPTLS----LSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 +T P+ S L+ E +L G+ +I+ + + K Sbjct: 125 HAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEK 184 Query: 168 TVSSHKGNIKRKIKTHNKQ 186 TV +H NI K+ ++ Sbjct: 185 TVKTHVSNILMKLDVADRT 203 >UniRef50_Q04UI4 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04UI4_LEPBJ Length = 233 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 23/202 (11%) Query: 5 IMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASN 64 I++ +T L L L + + + P +V D + + Sbjct: 18 IIEDNRHTALNLQELLSNSSDFQF-LRHYPDSQKAIEDIPENIPDIVI--LDIGLPGKNG 74 Query: 65 SQRIKLIINQHPNTLFIVFM---AIANVH------FDEYLLVRKN----------LLISS 105 + +K + + PNT +++F + YLL +++ Sbjct: 75 LECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQGGVSGYLLKDTPPELFLAELKVIILGG 134 Query: 106 KSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 S+ P D I+ + KKE TL L++ + +L G I+D+++I Sbjct: 135 ASLTPRIADKIIREFTKKEENQNP-PIQNTLGLTKRQLQILNFVALGMTVADIADELDIS 193 Query: 166 AKTVSSHKGNIKRKIKTHNKQV 187 + TVS H I +K++ H+K Sbjct: 194 SHTVSRHIEKIYKKMEVHSKSE 215 >UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML78_BDEBA Length = 204 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 33/195 (16%), Positives = 67/195 (34%), Gaps = 13/195 (6%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R GL + + + E ++ PSVV D + Sbjct: 5 KVLIIDDHPIVRAGLKTEVERLSDAFTVVGEAEDAAHALQMIQAENPSVVL--LDHLLRG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 +S + + I + + +VF L N + + K L+D+ +L Sbjct: 63 SSGFEVLDFIRKFNASIRVMVFTQS---LESAILKTYWNSPVVAIVSKGSLLEDVPKALL 119 Query: 122 KKETTITSFL--------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 + L++ E + RM G+ +I++ + +T+ +HK Sbjct: 120 ALKRGERFLSANIREAIDKAGVEVLTKREIEVARMIATGRSNKEIAEVLGCSDQTIKTHK 179 Query: 174 GNIKRKIKTHNKQVI 188 NI K+ + + Sbjct: 180 TNIMTKLGVNTSVEV 194 >UniRef50_B6IU89 Glycerol metabolism activator AgmR n=1 Tax=Rhodospirillum centenum SW RepID=B6IU89_RHOCS Length = 205 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 10/194 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R L ++ R E+ + +VD A R + + D + Sbjct: 1 MRLLIADDHDLLRDALRSHI-ERASPGTEVLGVGSVDAAVTALARHR-GIELVLLDLRMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + HP + A+ L + K++ +L + + + Sbjct: 59 GMNGLEGLVRLRTSHPGVKVALMSGEASPEDVRAALAFGAVGFLPKTLPGTALVEAISRL 118 Query: 121 LKKETTITSFLNMPT--------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + +T + P S +R E +L + G +I+ ++++ TV H Sbjct: 119 VAGQTFVPEGAAAPEPDSQLAGGASFTRREREVLDFLLKGCSNKEIARALSLEEVTVKLH 178 Query: 173 KGNIKRKIKTHNKQ 186 + RK+ N+ Sbjct: 179 VRGLCRKLGAKNRT 192 >UniRef50_C4RET4 Two-component system response regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RET4_9ACTO Length = 204 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 6/190 (3%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 ++ + R L L S K I D + +L +RP V+ + ++ Sbjct: 5 VVVAEEMGLLRSALRAALSSEEDIKV-IADAAGIGELWPVLRRERPDVLVLELKPDAPES 63 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + + ++ + P T + + E L + SK + L + + Sbjct: 64 AAAAVVARVVAEAPKTAVLAMSHRWSPPLVEAALAAGARGLVSKDVALSELANAVRTTAA 123 Query: 123 KETTIT-----SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIK 177 E I + L+ P L+R E +LR G +I+ ++ + TV +H I Sbjct: 124 GERVIDPCAAVAVLSPPANPLTRREREVLREAAEGVPLKEIARRLFLAHGTVRNHLSAIM 183 Query: 178 RKIKTHNKQV 187 K N+ Sbjct: 184 HKTGARNRME 193 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 61.6 bits (148), Expect = 1e-08, Method: Composition-based stats. Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 21/219 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R GL + + + E S++P +V + + D Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAV-CGEAENAFQALELVKSEKPDLVLADIT--LPD 70 Query: 62 ASNSQRIKLIINQHPNTLFI-VFMAIANVHFDEYLLVRKNLLIS----SKSIK------- 109 + + +K + QHP + + M ++ + L I K I Sbjct: 71 KNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGGRGYIMKHEGGKKIMQAIRHVL 130 Query: 110 ---PESLDDILGDILKKETTI-TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + IL+ + T + P +L+ E + R+ G T +I+ M++ Sbjct: 131 SGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANMHVS 190 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI--YHVVRLTDNVTNGI 202 AKTV H+ NIK K+ + Y V + T+G+ Sbjct: 191 AKTVEVHRMNIKTKLGLKTAAELIRYTVRWVESQSTSGL 229 >UniRef50_Q12ET8 Two component transcriptional regulator, LuxR family n=1 Tax=Polaromonas sp. JS666 RepID=Q12ET8_POLSJ Length = 177 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 65/177 (36%), Gaps = 9/177 (5%) Query: 20 LLSRGVKKREINDIETVDDLAIAC-DSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNT 78 L+ R K + +++ + + A P I D + D + ++ + Q P+ Sbjct: 2 LIRRLSSKATVTELDRLAAVMPAVEQHGVPE--LICLDLKLPDTNGVSGVRELKRQFPDV 59 Query: 79 LFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLN--MPTL 136 +V A +++ + + K +I +L+ PT Sbjct: 60 PLVVLSAAPAQDYED---LSIEAGADAYIQKSAGATEISN-VLRVFLNEELEPESATPTE 115 Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 LS+ + +L M G I++++ I TV H + R++ ++ H+ R Sbjct: 116 KLSKRQKQLLVMLDKGMSNRDIAEELQISEHTVKVHLWRLFRRLNVKSRSQASHLAR 172 >UniRef50_B0UG66 Two component transcriptional regulator, LuxR family n=2 Tax=Methylobacterium sp. 4-46 RepID=B0UG66_METS4 Length = 244 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 77/206 (37%), Gaps = 24/206 (11%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D S R+GL + + K I D ++ + + + +V I D F Sbjct: 4 ILLVDEHSVYRVGLRNIIEANLD-KVRITDASSLAQVD---KNFQADLVLI--DAFNLSK 57 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPES-LDDILGDIL 121 +RIK + + F V M+ +N D + ++P+S L + D+L Sbjct: 58 EALERIKEMRVACRSMRFAV-MSSSNARSDVLNCLSAGFHGFIYKMQPDSELIRAITDLL 116 Query: 122 --------------KKETTITSFLNMP--TLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + + +P L L+ + +L + G +I++ +NI Sbjct: 117 SGRIYVPRWLADGDDVKPNTPASIALPSDRLKLTPRQHEILPLLAQGMSNKEIANSLNIA 176 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHV 191 A T H + R + N+ + Sbjct: 177 AGTAKIHTAALLRALGARNRTEAAFI 202 >UniRef50_B4CV47 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV47_9BACT Length = 209 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 15/192 (7%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D R GL L + + +++ A RP VV D + Sbjct: 8 VLLVDDHFMVRRGLAVALRVEKDLAV-VAEAGNCEEMLAAYRQHRPDVVL--LDWRLPGP 64 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + ++ L+ +HP ++ A+ DE++ + + +K +I+ I Sbjct: 65 NGAEATALLREEHPGARVLMLSALDG---DEHIHLAVRAGAAGYVLKSAERGEIIQAIRA 121 Query: 123 KETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 + F + +S E +L AG+ +I D + I TV Sbjct: 122 VHGGKSYFSPGLEALLHDRARKVEISPREREVLVRAAAGERNKEIGDHLGISEATVKVFM 181 Query: 174 GNIKRKIKTHNK 185 I +K+ ++ Sbjct: 182 ARIFQKLDARDR 193 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 68/202 (33%), Gaps = 21/202 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D S R GL LL + ET+ C P V+ D + Sbjct: 5 IKVMLVDDHSVVRQGLR-LLLELDDTMEVCGEAETLTGAVAVCAEVAPDVIL--LDFKLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + Q P I+ A A+ H + +K ++++ I Sbjct: 62 DGDGIIGCGNLKRQFPQVKIIILTAYADDHL---VTETIKAGADGYLLKNVESEELINTI 118 Query: 121 LK-KETTITSFLNMPTLSL--------------SRTESSMLRMWMAGQGTIQISDQMNIK 165 + ++ + + E +L M G+ +I++ M I Sbjct: 119 QAVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQV 187 KTV ++ NI +K+ N+ Sbjct: 179 DKTVRNYVSNILQKLNVSNRTE 200 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 76/207 (36%), Gaps = 28/207 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R G+ + + E D+++ +A + P VV D + Sbjct: 5 RVVVVDDHDMFRAGVRSEIGASVDIVGEGADVDSAVKAIVAAE---PDVVL--LDVHLPG 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 ++ +K + +HP F+A++ E ++ K S +++ I Sbjct: 60 GGGTEVMKQVHQRHPEVK---FLALSVSDAAEDVIGVIRAGARGYVTKNISGTELVDAIG 116 Query: 122 KKETTITSF-LNMPTL-------------------SLSRTESSMLRMWMAGQGTIQISDQ 161 + F + LS+ E +LR+ G +++ + Sbjct: 117 RVADGDAVFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEVARE 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + I KTV +H ++ RK++ N+ + Sbjct: 177 LFISVKTVETHVSSVLRKLQLSNRHEL 203 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 70/200 (35%), Gaps = 24/200 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSR-GVKKREINDIETVDDLAIACDSQRPSVVFINEDCFI 59 M I+D GL L SR G++ I D A DS P V+ D + Sbjct: 1 MDVFIIDDHPIVLQGLKNLLESREGIRVTGIFDQAD--SALAALDSHIPEVML--MDINL 56 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRK-NLLISSKSIKPESLDDILG 118 D S + + HP + ++H + +++ S +K DDI+ Sbjct: 57 PDISGVTLCQQVKQAHPEIRVVAL----SIHNERSVIMSMLQSGASGYVLKNAIGDDIVA 112 Query: 119 DILKKETTITSFL--------NMPTL------SLSRTESSMLRMWMAGQGTIQISDQMNI 164 + P L+R E +L + G T QI+ ++ I Sbjct: 113 ALQAAMEGQIYLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFI 172 Query: 165 KAKTVSSHKGNIKRKIKTHN 184 TV SH+ N+K K N Sbjct: 173 STHTVESHRKNLKEKFGVPN 192 >UniRef50_A1VIF2 Two component transcriptional regulator, LuxR family n=1 Tax=Polaromonas naphthalenivorans CJ2 RepID=A1VIF2_POLNA Length = 219 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 67/198 (33%), Gaps = 16/198 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +++D + R G+ L S + I D + D + + SV + D + Sbjct: 10 TVLLVDDHTLFREGMRLMLGSSPLVHAHILDAGNLPDAL----ALQQSVDLVLLDIGLPG 65 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + + P+ + ++ A L + SK+ +P + + L Sbjct: 66 IGGLEGLLSVRQRWPDAVIVMLSAHDRPELVREALSKGACGFVSKTAQPVQICQEVRRWL 125 Query: 122 KKETTITSFLNMPT------------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 ++ SL+ + +L++ G I+ ++++ T+ Sbjct: 126 YQQRGPEPQPQALPGEAAAGAIPGGDESLTPRQYEVLKLLAQGLSNKAIAFKLHLSEHTI 185 Query: 170 SSHKGNIKRKIKTHNKQV 187 +H I R + Sbjct: 186 RNHVVAILRHFNALTRTE 203 >UniRef50_B7GMR0 DNA-binding response regulator, NarL family (REC-HTH domains) n=4 Tax=Bacillaceae RepID=B7GMR0_ANOFW Length = 206 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 76/189 (40%), Gaps = 10/189 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + G+ L + + + L + ++ P V+ D + Sbjct: 9 IKVLLVDDHALMIEGVKELLGREEDMHV-VGTVLHLSQLQESIETLNPHVIV--MDIRLK 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + K + +P+ ++ ++ EY+ K+ S+ +K ES+ + I Sbjct: 66 DGNGLEWTKKMKMLYPDCKVVILSG---YNYSEYIRAAKHAGASAFVVKEESILQLANAI 122 Query: 121 LKKETTITSFLNM----PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 F N +SL++ E +L++ + IS +NI +TV H I Sbjct: 123 RGAYEGFAFFPNDVDEEENISLTKMELVILKLIAQDKTNENISHSLNISRRTVEHHVSTI 182 Query: 177 KRKIKTHNK 185 +K++ ++ Sbjct: 183 IKKLRVDSR 191 >UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNS6_9BACT Length = 220 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 14/165 (8%) Query: 30 INDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANV 89 I ++ T ++ CD RP +V ++ + + + + +IN+ P ++ ++ + Sbjct: 40 IGEVATGEEAYQLCDDHRPDLVILDLR--LPGITGQELAERLINEQPEAKILIISSVEDP 97 Query: 90 HFDEYLLVRKNLLISSKS----IKPESLDDILGDILKKETTITSFLNMPTL--------S 137 LL +K + ++++ + + + + + + P + + Sbjct: 98 KRIGSLLQMGVTGFLNKKEEFSVFEQAIEAVANGNIFVKASAQTQSDSPDVLDQKELLET 157 Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKT 182 LS E ++ +G +I+ + + KTV SH+ NI +K+K Sbjct: 158 LSDREKQIVVFVASGMTNKEIAQNLGLSIKTVESHRSNISKKLKI 202 >UniRef50_Q3M2P3 Two component transcriptional regulator, LuxR family n=3 Tax=Nostocaceae RepID=Q3M2P3_ANAVT Length = 220 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 19/202 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + + ++ RLG+T + + + T ++ S P V + D + Sbjct: 2 IRVVFIEDNDIIRLGITTAINQQPDI-EMVGVGHTGNEGVELVKSLSPDVALV--DIGLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIA---------NVHFDEYLLVRKNLLISSKSIKPE 111 D S + IK I NT +V + + D Y+L + N + ++IK Sbjct: 59 DISGIEVIKQIKKSKSNTKVVVISCNSCQEVITAAISSGADSYILKKNNTSLIVEAIKST 118 Query: 112 SLDDILGD-------ILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + L D +LK T + + L++ E S+L + AG QI +++ I Sbjct: 119 YNNKSLFDSEIIQRGLLKIFPTQKAKGKIFDDHLTQREISVLALIAAGFSNKQIGEKLFI 178 Query: 165 KAKTVSSHKGNIKRKIKTHNKQ 186 TV +H NI K+ ++ Sbjct: 179 GENTVKNHARNIYSKLGVDSRI 200 >UniRef50_UPI0001C31456 two component transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31456 Length = 213 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 74/207 (35%), Gaps = 25/207 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R G+ L + ++ + LA+A RP V+ D + Sbjct: 3 IRVLVVEDFPLVRDGVVDALSRDPGIEVVGAAVDGREGLALA-HELRPDVIV--LDLHMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + + P+ IV A E LL + K S +++ I Sbjct: 60 EIGGMMVLERLRTELPSAKSIVMTATEK---AEPLLDAIAAGAAGYLTKRTSGEELRQAI 116 Query: 121 LKKETT------------ITSFLNMPT-------LSLSRTESSMLRMWMAGQGTIQISDQ 161 L + ++ T L+ TE +LR+ G QI+++ Sbjct: 117 LTVHGGGSVIAPQLAPHLLQAYSRASTGEAPDVRKKLTATEHEVLRLVAQGMTDRQIAER 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + + +TV +H I+ K + + Sbjct: 177 LFVSPRTVQNHLARIREKTSMRRRSDL 203 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 75/207 (36%), Gaps = 24/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSR---GVKKREINDIETVDDLAIACDSQRPSVVFINEDC 57 + +I+D R GL YL+ V + + L S P V+ ++ Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDL-- 64 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + + +I ++PN I+ + D+ + S +K S ++++ Sbjct: 65 MMPGMDGIETTRQLIVEYPNLKIIML---TSFLEDDKVYGAIEAGAVSYVLKTVSAEELI 121 Query: 118 GDIL-KKETTITSFLNMPTLS---------------LSRTESSMLRMWMAGQGTIQISDQ 161 + + ++ L+ E +L + G+ +I ++ Sbjct: 122 YALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEE 181 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 ++I KTV +H N+ K + ++ + Sbjct: 182 LHISVKTVKTHVSNLLMKCELEDRTQL 208 >UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNJ5_ALKMQ Length = 212 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 20/201 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ L+ R + + T+ + +P +V D + Sbjct: 6 VTILLVDDHAIVRYGIRS-LIERNDGLKVCGEAGTLQEAYHKVSDLKPDIVL--LDIKLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I + P+ I+ A A D +L +K +I+ I Sbjct: 63 DGDGAAGCREIKKRVPDVKVIILTAYAE---DSIILEAVKAGAEGYLLKDIDSKNIITAI 119 Query: 121 LKKETTITSFLNMPTLS--------------LSRTESSMLRMWMAGQGTIQISDQMNIKA 166 TS N L+ + S+L + G+ I+ ++ + Sbjct: 120 RNVVGGKTSLANEAISKVLNEVKQNCSGEDDLTSQDKSILELISQGKSNKDIAKEIYVSE 179 Query: 167 KTVSSHKGNIKRKIKTHNKQV 187 KTV ++ I +KI N+ Sbjct: 180 KTVRNNASRIFKKINAGNRTE 200 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 69/195 (35%), Gaps = 15/195 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + V+ +A+ + +P + ++ + Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEAIALHREH-QPDITIMDLR--LP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I I + P +V DE + +K DD+ I Sbjct: 67 RMNGVEAITRIREESPGARIVVLTTFDG---DEDIYRALQAGARGYLLKGMDADDLTAAI 123 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + M L+ E +LR+ + G+ +I+ ++I TV + Sbjct: 124 RSVHAGKSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEATVKT 183 Query: 172 HKGNIKRKIKTHNKQ 186 H N+ K+ ++ Sbjct: 184 HINNLLSKLGVSDRT 198 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 82/208 (39%), Gaps = 22/208 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R G+ L V + +A+A S +P ++ ++ + + Sbjct: 12 RVMIVDDHPLMRRGVRQLLELDSVFSVVAEASNGSEAIALAGRS-QPDLILLDLN--MKG 68 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S +K + ++ + I+ + +++ D Y LV + S +K + +L I Sbjct: 69 LSGLDTLKALRSEGIDARIII-LTVSDARSDVYALV--DAGADSYLLKDSEPEALLAQIR 125 Query: 122 KKETTITSFLN-------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + F P L+ E +L+ + G QI+ Q++I +T Sbjct: 126 QAAEGRSVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEET 185 Query: 169 VSSHKGNIKRKIKTHNK---QVIYHVVR 193 V H N+ RK+ ++ V+Y + Sbjct: 186 VKVHIRNLLRKLNVRSRVAATVLYLEYK 213 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 78/210 (37%), Gaps = 29/210 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ + + R GL L S + + + E + + P VV D + Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEV-VGEAENGREAIKMVEELAPDVVL--MDISMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + ++P+ ++ + +EY+ S IK + D++ I Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHS---TEEYIFETLRAGASGYLIKRSAPTDLIKAI 117 Query: 121 ----------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQI 158 ++++ ++ L LS E +L++ G +I Sbjct: 118 HAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDL-LSAREREVLQLIAEGHANREI 176 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + + I KTV +H+ +I++K+ + + Sbjct: 177 AGHLYISPKTVEAHRNHIQKKLGLNGTAEL 206 >UniRef50_Q3JU73 DNA-binding response regulator n=55 Tax=Burkholderia RepID=Q3JU73_BURP1 Length = 363 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 66/219 (30%), Gaps = 31/219 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M ++++ + R GL LL + + ND + Q ++ ++ Sbjct: 85 MRFLVLNSDAERRDGLKT-LLRQIDRHAGYNDAKDWRQAQRLIKQQSFDLIVVDWQDIKR 143 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + T + A+ + L L + S++ +P + L + Sbjct: 144 LGD----LHALCQACAPTPVAALVDDASPVHAQALFEAGVLGVISRTTRPHLIVRALEMV 199 Query: 121 L--------------------------KKETTITSFLNMPTLSLSRTESSMLRMWMAGQG 154 L + + P LS ++ ++R G Sbjct: 200 LLGGHYVPPSALNLTEPAARARDGRVEAIVSQLPRRKRSPCSLLSPRQAQIMRFVHMGST 259 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 I+ + I TV H +I +++ N+ + Sbjct: 260 NKMIARTLGISEGTVKIHLASIFQQLGATNRAAAVAIYN 298 >UniRef50_C9P7J6 Two component transcriptional regulator LuxR family n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P7J6_VIBME Length = 202 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 16/167 (9%) Query: 38 DLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLV 97 + +P +V I D I I+ T F+V + N HF + + Sbjct: 37 EAIKKIKEYQPHIVVI--DISIPLIDGISVIERCTAMGITTKFLVLTSQPNSHF---VSL 91 Query: 98 RKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPT-----------LSLSRTESSML 146 K L++++ + F + T LS E + Sbjct: 92 CMQAGAYGYLSKETGLEELVTAMKAIAAGYKFFPDCVTHLSTVQDQNDLSILSAREIVVF 151 Query: 147 RMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 ++G +I+++M I KTVS++K I K+ N + + + Sbjct: 152 NYLVSGLSNNEIAEKMLISNKTVSTYKKRIMDKLNAKNIVDLISIAK 198 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 61.3 bits (147), Expect = 2e-08, Method: Composition-based stats. Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 25/199 (12%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 ++ D R GL L + G + + E P ++ D + D Sbjct: 5 VLLADDHKIVRDGLRTLLETHGSMNV-VAEAENGQKTITLARELHPEIII--MDISMPDM 61 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + I + P I A+ HF +L S +K + ++++ I Sbjct: 62 NGIDATRKITSDLPGIKVIALSMHADRHFVIGML---EAGASGYLLKDCAFEELVNAIQT 118 Query: 123 KETTITSFLN-------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + T + + L+ E +L++ G QI+ ++ Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178 Query: 164 IKAKTVSSHKGNIKRKIKT 182 + KTV +H+ NI +K+ Sbjct: 179 VSVKTVETHRRNITQKLGV 197 >UniRef50_B8EMC5 Two component transcriptional regulator, LuxR family n=2 Tax=Rhizobiales RepID=B8EMC5_METSB Length = 232 Score = 60.9 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 74/198 (37%), Gaps = 22/198 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D R G+ LLS V+ E+ + T + S RP +V ++ + + Sbjct: 27 MKVLLVDDHIVVREGVRR-LLSVFVESVELLEAGTTLEALSIYRSTRPDIVILDLN--LP 83 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHF-DEYLLVRKNLLISSKSIKPESLDDILGD 119 + +K ++ + P ++F ++H Y+ K S ++ + Sbjct: 84 GTGGLELLKRLLIEDPRARVLIF----SMHTVTLYVARALQSGARGYISKGASAEEFVEA 139 Query: 120 ILKKETTITSFLN--------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 I + P SLS E ++R+ G+ I+D + + Sbjct: 140 IHQVMGGGRYIERELAADLALNVFGSQDPGKSLSARELDIMRLLAKGKSLSAIADTLGVS 199 Query: 166 AKTVSSHKGNIKRKIKTH 183 KT+++ +K K+ Sbjct: 200 YKTIANTCTAMKHKLLVQ 217 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 60.9 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 82/207 (39%), Gaps = 24/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSR---GVKKREINDIETVDDLAIACDSQRPSVVFINEDC 57 + +I+D R+GL YL+ V + E V+ L +P ++ ++ Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILMDL-- 70 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + ++ K + ++ P+ ++ + D+ ++ S +K S ++++ Sbjct: 71 MMPGMNGAEATKEVRSRFPDMKIVIL---TSFLEDDLVVQAVEAGAVSYVLKTVSAEELI 127 Query: 118 --------------GDILKKETTITSFLNMPT--LSLSRTESSMLRMWMAGQGTIQISDQ 161 G++ + T + ++ E +L + G+ I+++ Sbjct: 128 YALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAEE 187 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 ++I KTV +H N+ K + ++ + Sbjct: 188 LHISIKTVKTHVSNLLMKCELEDRTQL 214 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 60.9 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 71/208 (34%), Gaps = 24/208 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R+G+ L + D E+ + + P VV D + Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDV-VADAESGEQALAYVKTHSPDVVL--LDMKMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRK-NLLISSKSIKPESLDDILGD 119 + + + +PN I AI + L R L K +++ Sbjct: 65 GIDGWEVTRRLKKTNPNIKVIAVTAI----CSDPLPTRVLQLGAMGYLTKESGAEEMAAA 120 Query: 120 ILKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 I K + P LS E ++ M +G I+D++ Sbjct: 121 IRKVAKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLF 180 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 + +KT++ ++ + K+ N + ++ Sbjct: 181 LSSKTINGYRYRMFEKLGIKNDVELTYL 208 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 60.9 bits (146), Expect = 2e-08, Method: Composition-based stats. Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 20/202 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R GL L +RG + + + + + + + V D + Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRV-VGEAGSCREALELLEKVQADVAI--LDVSLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + + P + ++ EY+ K ++L + Sbjct: 59 DGTGIALCQRLRERFPELRLLALSMHEDL---EYVRGFLQAGGQGYVSKAAVDQELLDAV 115 Query: 121 LKKETTITSF--------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L + LS E +LR+ G ++++++ I Sbjct: 116 LAVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISE 175 Query: 167 KTVSSHKGNIKRKIKTHNKQVI 188 KTV++++ K+ ++ + Sbjct: 176 KTVATYRERGMEKLGLASRSEL 197 >UniRef50_Q842F8 Response regulator, two-component system n=8 Tax=Rhodococcus RepID=Q842F8_RHOSR Length = 209 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 15/205 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S ++ D R G+ L + + T + L A P +V D + Sbjct: 2 ISVVVCDDHGIIRSGIRRILETTTDFHL-VASAPTGELLLQAVRDFAPELVV--LDIRLS 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + ++ I P T ++ + + R +K E L +L + Sbjct: 59 DCNGLDLLEQISAISPETRVVMLSMYGAKGYVDKAKTRGARGYITKECLDEELVSVLYTV 118 Query: 121 LKKET------------TITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 +K E S L SLS E ++++ +G +I++++ + +T Sbjct: 119 MKDEGFVSFRADTTEPGGSESLLEANIDSLSSRELEVMKLIASGLTNTEIAEELTVSPRT 178 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVVR 193 V SH+ +I+RK+ + + V R Sbjct: 179 VESHRASIQRKLLIRTRAELARVAR 203 >UniRef50_A1TT54 Two component transcriptional regulator, LuxR family n=4 Tax=Acidovorax RepID=A1TT54_ACIAC Length = 240 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 21/210 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D G+ +L + ET + L I P V D ++ + Sbjct: 26 ALVVDDHPLVGRGMAEFLRGHPRLADVRHAHETSEALRIIASHGSP--VLALVDFWLAEG 83 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + I + P T ++ A + + K PE+ + +L Sbjct: 84 AATSFIGNLFAMSPETRMLIMSADHHPAIVLKVRASGAHGFVHKRESPETFHAAVNAVLD 143 Query: 123 KET---------------TITSFLNMP----TLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + T + L L+ + +L + + G I++ ++ Sbjct: 144 GASWFDPGATASLSPSALGATPLREIHLAPVDLGLTPRQGQILALVLEGLPNKPIANALH 203 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 + TV H I +K+ N+ + +R Sbjct: 204 LSEHTVKEHLTAILQKLGVSNRVELISRLR 233 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 20/192 (10%) Query: 15 GLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQ 74 GL G L + + L + +RP VV ++ + ++ I + Sbjct: 22 GLRGLLERESDM-IVVATATDGESLLAIIERERPDVVVMDLA--MPTRDGLSCLREIRRR 78 Query: 75 HPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMP 134 ++ A + L + ++K + + I F + Sbjct: 79 GMPVKVVILTAFGD---GGALQSAWEMQADGFALKTDPPRQTIATIRNVAHGQIVFPRVV 135 Query: 135 T--------------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 L++ E +LR+ G QI++++ ++ TV H NI +K+ Sbjct: 136 RQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQESTVKYHLQNIFQKL 195 Query: 181 KTHNKQVIYHVV 192 N+ V Sbjct: 196 GVTNRTEAAQVY 207 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 28/204 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLS-RGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFI 59 M +++D S R G+ L S GV I + + + +P +V D + Sbjct: 4 MRVLLVDDHSLVRAGIRALLGSIAGVAG--IEEASSGRQAVELAATMQPDLVL--MDIAM 59 Query: 60 HDASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 D + I HP+ ++ M F++ L +K ++ ++ Sbjct: 60 DDMDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALR----CGARGYLLKDAAVAELEM 115 Query: 119 DILKKETTI-------------TSFLNMPT-----LSLSRTESSMLRMWMAGQGTIQISD 160 I P L+ ++ +L + +G GT +I+ Sbjct: 116 AIAAVMRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIAR 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHN 184 ++++ KTV +H+ I ++ + Sbjct: 176 RLDLSVKTVEAHRAQIMERLGVRD 199 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 23/205 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I D + R G+ +LS+ + + + + P V+ D + Sbjct: 2 IKIAIADDHALLREGMRR-MLSQSELIEVVGEASNGAEAVEVVKEKAPDVLL--LDITMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + NT ++ A+ ++Y L + K L+++L I Sbjct: 59 VKDGIEATADILALNVNTKILILSMHAD---EQYALRTLRAGANGFISKGARLEELLKAI 115 Query: 121 LKKETTITSFLNMPTLSL-----------------SRTESSMLRMWMAGQGTIQISDQMN 163 + S S+ E ++ G +I+ + Sbjct: 116 TDVHEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQ 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVI 188 I KTV +H+ ++ +K++ N I Sbjct: 176 ISVKTVDTHRSHVLKKLELRNNSDI 200 >UniRef50_C1CZS0 Putative Transcriptional regulator, LuxR family n=1 Tax=Deinococcus deserti VCD115 RepID=C1CZS0_DEIDV Length = 762 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 2/78 (2%) Query: 113 LDDILGDI--LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 L+D++ D+ + + T++ L+ E +LR+ G +I+ Q+NI A TVS Sbjct: 669 LEDLVPDVAAMLENAVQTTYAETRVTPLTGREQDVLRLLAQGISDKRIAQQLNISAATVS 728 Query: 171 SHKGNIKRKIKTHNKQVI 188 H ++ K+ HN+ + Sbjct: 729 KHVSSMLSKLGVHNRVEL 746 >UniRef50_Q47MK9 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=Actinomycetales RepID=Q47MK9_THEFY Length = 217 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 72/203 (35%), Gaps = 18/203 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ + +D R GL L + + + + + RP VV ++ + Sbjct: 4 ITVLTVDDNIVVRAGLVALLEASDDIQV-VGEASDGAEAVTKAQELRPDVVLLDVRMPVR 62 Query: 61 DA-----SNSQRIKLIINQHPNTLFIV----------FMAIANVHFDEYLLVRKNLL-IS 104 D ++ K+++ H ++ ++ N DE + ++ + Sbjct: 63 DGVSVVEELAEFTKVVMLTHTEDPQVIQTSLRRGASGYLVHGNFTLDELNRALREVVHGT 122 Query: 105 SKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + P + ++ L+ + L L+ E+ +L G +I+ ++ + Sbjct: 123 GSPLSPVAATALVSS-LRAAPPTPVPVAPAALGLTEREAEVLEAAARGLSNAEIAKELFL 181 Query: 165 KAKTVSSHKGNIKRKIKTHNKQV 187 KTV +H I RK+ + Sbjct: 182 SEKTVKNHINRIFRKLGVRTRAA 204 >UniRef50_C7N6Z5 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N6Z5_SLAHD Length = 491 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%) Query: 133 MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + LSR ES + ++W+ G G I D + I TV +H +I RK HN++ I Sbjct: 426 VEAHGLSRRESDVFKLWVTGHGLKYIQDTLFISESTVKTHMRSIYRKCDVHNREEI 481 >UniRef50_C7MLV1 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7MLV1_CRYCD Length = 546 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 L+ E+ + +W G G+ I D + I A TV +H +I K HN+ I Sbjct: 486 GLTARETEIFMLWATGHGSKYIQDSLVISASTVKTHVRHIYDKCGVHNRAEI 537 >UniRef50_C4FXD5 Putative uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FXD5_9FIRM Length = 199 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 24/189 (12%), Positives = 66/189 (34%), Gaps = 7/189 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I + + R L LL + ++ + + SQ + D + Sbjct: 1 MRLLIAEDQAMLRDALCQ-LLELEDQVESVHPAKNGQEAMEIIGSQTIDIAL--LDIEMP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANV-HFDEYLLVRKNLLISSKSIKPESLDDILGD 119 AS ++ HP ++F +F+ L + + + ++ + Sbjct: 58 YASGLDVLEWSKAHHPEVKVLIFTTFKRPGYFERALKADVDAFVLKERPVHALMETLKNI 117 Query: 120 ILKKETTITSFLN---MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNI 176 + K+ ++ L+ E ++ G +++ ++++ TV ++ + Sbjct: 118 LAGKKEYAPELVDRLFTHHNPLTPQERQLMAGVREGLSNKELAQELHLSEGTVRNYMSTV 177 Query: 177 KRKIKTHNK 185 +K+ N+ Sbjct: 178 LQKLSAKNR 186 >UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQZ3_9BACT Length = 222 Score = 60.9 bits (146), Expect = 3e-08, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 64/165 (38%), Gaps = 16/165 (9%) Query: 38 DLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLV 97 + C+ ++P +V ++ + + ++ ++P T FI A LL Sbjct: 35 EALKLCEEEKPDIVMFEM--YLPGLNGIEILRQYSPKNPGTRFIAISANFTPDSIRELLE 92 Query: 98 RKNLLISSKSIKPESLDDIL--------------GDILKKETTITSFLNMPTLSLSRTES 143 I SKS L + L +L++ + S + LS E Sbjct: 93 LGCHGIVSKSSSAAKLKEGLREVKSGSGYLCPICASLLRESHLVGSAVAKKKNRLSNRER 152 Query: 144 SMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 +L+ G T QI++ + + KT+ +H+ N+ +K+ + + Sbjct: 153 EVLQAVAEGFSTKQIAEMLEVSVKTIEAHRANLMKKLDARSAVEL 197 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 68/203 (33%), Gaps = 26/203 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL Y+L + + P VV D + Sbjct: 11 IRVLIADDHALVREGLR-YVLDADPGIEVVGEASNGRTAVDLALQHVPDVVV--LDITMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSK------------- 106 + S + + P+T ++ M + E + + + + Sbjct: 68 EESGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIGTHGYLLKDSAGEELRAAIRAV 127 Query: 107 -----SIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 P + + + E + L++ L+ E +L G I+ + Sbjct: 128 HAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDL----LTPRERDVLAGVARGLTNKAIAAE 183 Query: 162 MNIKAKTVSSHKGNIKRKIKTHN 184 + I +TV +H+ ++ RK++ H+ Sbjct: 184 LGISRRTVEAHRESLMRKLQIHS 206 >UniRef50_A3U430 DNA-binding response regulator, LuxR family protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3U430_9RHOB Length = 196 Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 11/189 (5%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D R + YL G+ E++ +E ++ A ++ +V D + Sbjct: 3 KVLLADDHDLVRETIAAYLRQTGL--HEVHPVEGLNAAQDALRAESFDLVL--LDYRMPG 58 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 ++LI P+ + A+ E S K + D+++ + Sbjct: 59 MEAFDGLRLIRRAFPDVPVALISGAASP---EVARQAMGFGASGFLPKTLAPDELIRAVD 115 Query: 122 KKETTITSFLNMP----TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIK 177 + T + + SL+ E ++R AG +I+ ++ ++ TV H + Sbjct: 116 RLVAGGTFLPDEAVARMSFSLTPREVEVVRGIAAGYSNKEIARELGVQEVTVKLHVKTLS 175 Query: 178 RKIKTHNKQ 186 RK++ N+ Sbjct: 176 RKLEARNRT 184 >UniRef50_A9NCJ1 Transcriptional regulator n=7 Tax=Coxiella burnetii RepID=A9NCJ1_COXBR Length = 211 Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats. Identities = 42/204 (20%), Positives = 79/204 (38%), Gaps = 22/204 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +I+D R L L K I + ET + + +RP+V+ D + Sbjct: 2 ISVLIVDDEQLVREALKLLLKDASGVKV-IGEAETGEMALASAREKRPNVIL--LDVHLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D S + ++ Q+P T I+ + N F LL + + S K ++++ I Sbjct: 59 DFSGLYISQKLLRQYPETKVIILTSEKNKTFSRRLL---EVGVHSYLTKEAEQEELIQAI 115 Query: 121 LKKETTITSFLNMPTLSL----------------SRTESSMLRMWMAGQGTIQISDQMNI 164 + + L S E +L M + G T I+ ++++ Sbjct: 116 KEVQKGKRIISPKIASQLAISKMTSQVSGVLDSISDREMEILLMMVRGVPTETIAQKLHL 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVI 188 KTVS+++ I +K+ N + Sbjct: 176 SPKTVSTYRVAIFKKLNVKNDAEL 199 >UniRef50_Q475M9 Regulatory protein, LuxR:Response regulator receiver n=3 Tax=Cupriavidus RepID=Q475M9_RALEJ Length = 212 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 19/182 (10%) Query: 15 GLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQ 74 G + L+ + R + V ++P +V + D + IK + + Sbjct: 20 GEASWQLAHALGARRTLLADNVRQAQQMVRERQPGLVVVELDAL--GQAGITLIKRLAAR 77 Query: 75 HPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFL--- 131 HP+ +V L + L +++ + F Sbjct: 78 HPDVRLLVLSDSDATMAPVQALRA---GAHGFVPRQRDLAEMVQAARGVMSGYLVFPTHT 134 Query: 132 -------NMPTLS----LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 +P+ L+ E ++L+ G I ++ I +KTVS+HK NI K+ Sbjct: 135 LDAARKLRLPSAGKLARLTARELTVLQYLARGHSNKTIGARLLISSKTVSTHKTNIMCKL 194 Query: 181 KT 182 Sbjct: 195 NV 196 >UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT Length = 219 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 41/203 (20%), Positives = 74/203 (36%), Gaps = 19/203 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I++ R GL L++R + + +A A + P V+ D +H Sbjct: 9 RVLIVEDHEIFREGLAQ-LINRQPDFMVCGECDDPKGIAAAIEKAEPDVLL--LDLMLHG 65 Query: 62 ASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A IK + P +V M V L + + + L + + Sbjct: 66 AGGIDLIKQLHTLFPKVRILVLSMHDETVFAPRALRAGALGYVMKQEASGQVLAALRAVV 125 Query: 121 LKKETTITSF--------LNMPTLS-------LSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + + MP LS LS E + + AG T +I+ ++ I Sbjct: 126 VGELHVSRKVGITLMQRAIKMPELSAADGVAKLSDRELHVFELIGAGIPTREIATRLGIS 185 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 KTV +H+ NIK K++ + + Sbjct: 186 IKTVETHRENIKHKLELQSGTEL 208 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 60.5 bits (145), Expect = 4e-08, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 78/211 (36%), Gaps = 17/211 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREIN-DIETVDDLAIACDSQRPSVVFINEDCFI 59 + T+I+D + R G YL V ++ + + ++ P VV D + Sbjct: 6 IRTLIVDDHAVVRSGYRSYL--EQVPGFQVVAEADCANEAYAQYKRMHPDVVI--MDIML 61 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD---- 115 AS + I++ HP ++F + + L L K P++L + Sbjct: 62 QGASGIDASRRILSNHPGAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIA 121 Query: 116 -------ILGDILKKETTITSFLNMPTL-SLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + + + +LS E + + ++G +I+ +N+ AK Sbjct: 122 VAGGDRYLDASMAQSLVFSRYDRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAK 181 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 TV++ I++K+ + + + D V Sbjct: 182 TVANRASMIRQKLGVSSDIQLVKLAVAADIV 212 >UniRef50_C4UJG9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Yersinia ruckeri ATCC 29473 RepID=C4UJG9_YERRU Length = 222 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 75/195 (38%), Gaps = 10/195 (5%) Query: 9 CSYTRLGLTGYLLS-RGVKKREINDIETVDDLAIACDSQRPSV--VFINEDCFIHDAS-N 64 C YTR G+ L G ++ DS++ V + + + Sbjct: 13 CVYTREGINFILKELSGDLNVKLISNAGYVQANTIHDSKKEDVDFFILGLEWGNNYGETF 72 Query: 65 SQRIKLIINQHPNTLFIVFMAIANV-HFDEYLLVRKNL-LISSKSIKPESLDDILGDILK 122 I+ + +P IV ++ YLL N+ + I+ + L L IL Sbjct: 73 DFFIQWLPLYYPQAKIIVMTQCDSIGMLKNYLLGLGNVSAVLDSKIEIQELRQSLQAIL- 131 Query: 123 KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKT 182 + + T+ L+ E +L+ + G +++ ++ I KTVSSHK K++ Sbjct: 132 TGSLDSKAKRKQTMLLTNQEVKVLKHLLQGMPVFKVARKLQIHCKTVSSHKRAALNKLEV 191 Query: 183 HNKQVIYHVVRLTDN 197 +Y +++ +N Sbjct: 192 ---TSLYALMKYGNN 203 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 24/171 (14%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVF-------MAIANV 89 + A + +P V ++ + + Q + I P T +V + + ++ Sbjct: 38 AEAVAAAERLQPDVALMDMT--MPRLNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESL 95 Query: 90 HFDEYLLVRKNLLISS------------KSIKPESLDDILGDILKKETTITSFLNMPTLS 137 V K + P L ++GD L+ + P Sbjct: 96 KAGARGYVLKECSSQELCLAIQTVANGQYYLTPAILSTLIGDYLRLTENEEQGSDCP--- 152 Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 LS E +L++ + G QI++Q++I TV +H+ +I K+ ++ + Sbjct: 153 LSERELDVLKLLVKGCNAKQIAEQLSISKNTVDTHRRHILDKLGCNSMAEL 203 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 15/195 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + + AC + P VV ++ Sbjct: 8 VRILLVDDHFVVRSGLAASLGLEEDL-LVVAEAGSAAEALTACAAHTPDVVIMDLQLGEV 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + HP +VF + A DE + K +D+L I Sbjct: 67 NGITCT--EQLGQAHPGIRILVFSSFAR---DEDVYRAIRAGALGYLQKSAPREDLLKAI 121 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L S E +L G+ +I+ + + +TV Sbjct: 122 RTVGLGKRYLPGDIAQRLAERLGRPEPSPREREVLAQMAKGRSNKEIASVLGLSEETVKR 181 Query: 172 HKGNIKRKIKTHNKQ 186 H N+ K+ ++ Sbjct: 182 HVSNVLEKLGAQDRT 196 >UniRef50_Q1QZ85 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1QZ85_CHRSD Length = 220 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 35/199 (17%), Positives = 70/199 (35%), Gaps = 16/199 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I+ D R L L + + EI + +T++ P I D + Sbjct: 6 KFIVADDHPLFRAALNQAL-RQVAPQAEIVEADTMEATTDMVLR-HPDADLILLDLHMPG 63 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVH---------FDEYLLVRKNLLISSKSIKPES 112 A + + Q P +V ++ +L + +++I+ Sbjct: 64 AHGFSGLIQLRGQSPEVPVVVISGSEEPPVVRRAIDYGASGFIPKSSSLDVIAEAIRQVL 123 Query: 113 -----LDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 L + + DIL + + SL+ + +L M G QI+ ++N+ Sbjct: 124 EGEVWLPEEMVDILGESNEEEARFAEAIASLTPQQFRVLNMLNEGLLNKQIAYELNVSEA 183 Query: 168 TVSSHKGNIKRKIKTHNKQ 186 T+ +H I RK+ H++ Sbjct: 184 TIKAHVTAILRKLGVHSRT 202 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 26/206 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D + R G++ L + + + + +P VV D + Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEV-VGEAGDGQEAVDMVAQFKPDVVL--MDIVMPR 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI- 120 + + KLI +P+T ++ A +++ Y+L S +K D+I+G I Sbjct: 62 LTGVEATKLIKKNNPSTCILILTAYSDI---RYILGLLEAGASGYLLKSAKSDEIVGAIR 118 Query: 121 -----------------LKKETTITSFLNMPTLS--LSRTESSMLRMWMAGQGTIQISDQ 161 L++ ++ + + LS E +L++ G +I+D+ Sbjct: 119 AIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADK 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQV 187 + + +TV +H NI K++ + Sbjct: 179 LTLSMRTVKAHLSNIFNKMRCSCRTE 204 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 75/200 (37%), Gaps = 17/200 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREIN-DIETVDDLAIACDSQRPSVVFINEDCFIH 60 +I+D + R GL L+ GV E+ + +D A RP V+ D + Sbjct: 5 RVVIVDDHALVRQGLR--LILHGVAGIEVVGECSCGEDALKAAVKDRPDVML--MDVHMP 60 Query: 61 DA-SNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESLDD--- 115 + + P I+ M VH ++ L + ++ E + Sbjct: 61 QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAGVSGIVFKHDDSSEIVAAIQH 120 Query: 116 -------ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + ++ T + LS E+ +L + G +++D ++I KT Sbjct: 121 GQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKT 180 Query: 169 VSSHKGNIKRKIKTHNKQVI 188 V +H+ +I R+I H++ + Sbjct: 181 VETHRQHIMRRIGLHSRAAL 200 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 68/205 (33%), Gaps = 23/205 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL + K + + + + + P V + D + Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHC-PDVAVV--DISMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + P+ ++ ++Y++ K + + ++ I Sbjct: 59 GIDGLEVVSRLHAELPDLPMLILTMHEE---EQYVVRAIEAGAMGYMTKKSAPEQLVTAI 115 Query: 121 LKKETTITSFLNMPTL-----------------SLSRTESSMLRMWMAGQGTIQISDQMN 163 K + SLS+ E +LR +G +I+D + Sbjct: 116 RKLHSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYH 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVI 188 I KTV +++ + +K+ N I Sbjct: 176 ISVKTVDTYRARLLKKLNLRNNADI 200 >UniRef50_A7HS72 Two component transcriptional regulator, LuxR family n=1 Tax=Parvibaculum lavamentivorans DS-1 RepID=A7HS72_PARL1 Length = 213 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 66/200 (33%), Gaps = 23/200 (11%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 T ++D R + L + I + +P V ++ + Sbjct: 6 TYLIDDHHVLRQAVVEMLEAEEDISV-IGQSGDARSGIGEIANLKPDVAILDLK--MPGM 62 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI-- 120 + I I+ P T I+F N Y+ N S +K S +D+L + Sbjct: 63 TGLAAIGEILRAAPKTGIIIFTMYDNP---AYVWETTNAGASGYVLKSASKEDLLRAVRA 119 Query: 121 -------LKKETTITSFLNM--------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 L+ E T + +L+ E +L GQ I+ ++I Sbjct: 120 VHAGGGYLQAEVTKPLLRRLAQDARTSGQKATLTSRELQVLECLADGQSNKMIAQTLSIT 179 Query: 166 AKTVSSHKGNIKRKIKTHNK 185 TV +H ++ K+ ++ Sbjct: 180 EDTVKAHLKSLYEKLGASDR 199 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 37/212 (17%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD------SQRPSVVFIN 54 + +++D R+G+ +L S +DI+ V + A + P ++ Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGS-------FDDIKVVGEAANGQEAVEMTAELSPDIIL-- 55 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 D + Q I+ I ++ I A+ + D+ L +K + D Sbjct: 56 MDMLMPVMDGIQAIREIRDRKLPGRII---ALTSFATDDKLFPAIKAGAMGYLLKDSTPD 112 Query: 115 DILGDI------------------LKKETTITSFLNMP-TLSLSRTESSMLRMWMAGQGT 155 ++L I L + + P L+ E L++ G+ Sbjct: 113 ELLEAIRRVHRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSN 172 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 I+++M + TV +H +I K+ N+ Sbjct: 173 KAIAEEMFVSEATVRTHMTSILSKLHLANRVE 204 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 22/206 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R G++ L + + + + +AC + P +V D + Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMAC-NLLPDLVL--MDIQMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIV---FMAIANVHF---------------DEYLLVRKNLL 102 D + + + I+++ + I+ F +V E +L + Sbjct: 61 DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGARGYVLKDAEKEDILRAVRAI 120 Query: 103 ISSKSIKPESLDDILGDILKKETTITSFLNMPTLS-LSRTESSMLRMWMAGQGTIQISDQ 161 + + + + D + + + L+ ES +L + G ++++ Sbjct: 121 AKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEVAET 180 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQV 187 + + KTV ++ NI K++ ++Q Sbjct: 181 LGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 17/202 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + T+I D R+GL L G ++ L + + ++ + Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEAL-VELRKGTFDALVLDLT--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESLDDI--- 116 + + IK I + P ++ M +++ L + + S + D I Sbjct: 59 GRNGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGASGYLCKDSAETLLADAIRKV 118 Query: 117 ------LGDILKKETTITS----FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + + ++ T+ + P L+ E + M + G G +I Q+N+ Sbjct: 119 ADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSV 178 Query: 167 KTVSSHKGNIKRKIKTHNKQVI 188 KTVS+HK +I K+ N + Sbjct: 179 KTVSTHKASILAKMNLRNSAEL 200 >UniRef50_UPI0001699909 response regulator n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699909 Length = 181 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 21/162 (12%) Query: 43 CDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL 102 C S RP VV D + + + ++ P+ + + N F L + Sbjct: 8 CSSDRPDVVL--MDVNMPGIGGIEATRRLLRIAPDLKVVALTMLDNEPFPARL---NEVG 62 Query: 103 ISSKSIKPESLDDILGDILKKETTI----------------TSFLNMPTLSLSRTESSML 146 K D+++ I P LS E+ ++ Sbjct: 63 AMGYLTKGCPADEMIQAIRSVFRGQPFVSSDVARKHILTDWKRHSATPFQGLSSRETQVM 122 Query: 147 RMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 M + GQ +ISD +++ KTVS+++ I K+ N + Sbjct: 123 LMILEGQRNQEISDGLSLSPKTVSTYRQRIYEKLDVRNDVEL 164 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 60.1 bits (144), Expect = 4e-08, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 64/167 (38%), Gaps = 15/167 (8%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLL 96 ++L + + +V ++ D + + + I+ I +P+ L ++ A + + Sbjct: 38 EELMRKLQATQVDLVLLDLD--MPGENGANLIERIRRHYPDLLILILSAHDEIKVVSRAV 95 Query: 97 VRKNLLISSKSIKPESLDDILGDILK-----------KETTITSFLNMPTLS--LSRTES 143 K P++L + + ++ + ++ LS E Sbjct: 96 QAGASGYICKDCSPKTLLEAIHKVVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQ 155 Query: 144 SMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 + R+ + G IS Q+ I +TVS+HK N+ K+ N + H Sbjct: 156 EIFRLLVEGLSNDDISRQLFISDRTVSAHKINLLNKLGLKNVVELVH 202 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 19/201 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL L + + + V A + P V+ ++ + + Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAV-VAEAGDVPSAERAVRAHHPHVLVLDLN--MP 70 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I ++ + P T +V + F L +K + D+++ + Sbjct: 71 GEQSLPAIPRLVAELPETAVVVLTMQQDPAFAREALRS---GARGYVLKEAADDELVQAV 127 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 T + P L+ E +LR+ G +I+ Q+ + + Sbjct: 128 RLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIR 187 Query: 168 TVSSHKGNIKRKIKTHNKQVI 188 TV SH+ +I++K++ ++ + Sbjct: 188 TVESHRAHIQQKVRRSSRAEL 208 >UniRef50_C3K8H7 Putative two-component system, response regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K8H7_PSEFS Length = 219 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 36/211 (17%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLA------IACDSQRPSVVFINE 55 + +++D R GL + G D E V A S P V Sbjct: 5 TLLLIDDHPLFRKGLAQLFDASG-------DFEVVGQAASGREGINLAVSLTPQQVL--L 55 Query: 56 DCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIK------ 109 D + S Q + + + +V A + LL L S +K Sbjct: 56 DLHMPGLSGLQVLDELRQLRLDCQVVVLTASPDR---AELLTALRLGASGYVLKETEPDA 112 Query: 110 -----------PESLDDILGDILKKETTITSFLNMPTLS-LSRTESSMLRMWMAGQGTIQ 157 LD L +L + + + L+ E L + AG Q Sbjct: 113 LLAYMRNCHKGAIVLDSTLIALLADQAEPSPSCDPIDSGNLTEREGQTLALIAAGMSNKQ 172 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 I ++ I TV + ++ +K+ H++ + Sbjct: 173 IGRELGISDGTVKIYVRSLLQKLGLHSRLEL 203 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 76/209 (36%), Gaps = 26/209 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL L G + LA+A + RP VV ++ Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGSAAGVLALA-EESRPEVVVMDLQLGA- 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + ++ + P ++ + +E + +K ++++ I Sbjct: 61 GRNGVEATRELVEKKPEIKVVIL---SMYDDEELVFRALESGARGYVLKRAGIEELTTAI 117 Query: 121 ---------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 L++ T L+ E +LR+ G +I+ Sbjct: 118 RLVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIA 177 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 ++ I KTV +H+ NI +K+ H++ + Sbjct: 178 RRLVISVKTVQAHRANIMQKLGLHDRVDL 206 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 33/209 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLA------IACDSQRPSVVFIN 54 + II D + R GL L +D E V + A P V+ ++ Sbjct: 2 IRVIIADDHTVVRNGLRHIL-------ERTSDFEVVGEAARGTEVPQLVRELSPHVILLD 54 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 + + + I+ + HP +V A ++Y++ + K + Sbjct: 55 LS--MPGRNGLELIRQLRTDHPALRILVLTMHAE---EQYVVRAFRAGAAGYLTKESAAT 109 Query: 115 DILGDILKKETT---------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 +++ + K + + P LS E + R + G+ QI+ Sbjct: 110 ELVEALRKVAAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIA 169 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + + AKTVS++K + K++ + + Sbjct: 170 AALCVSAKTVSTYKMRLMEKLQLRSDAAL 198 >UniRef50_A7BCY6 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCY6_9ACTO Length = 204 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 75/194 (38%), Gaps = 13/194 (6%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 +I+D R G+ ++ R + ++ +V D D RP V+ ++ + D + Sbjct: 1 MIIDDHEIVRRGIAE-IVDRDDALEVVAEVGSVADAVRRADLVRPDVILVDLQ--LPDGT 57 Query: 64 NSQRIKLIINQHPNT-LFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL- 121 + + + HP ++ + E L I K+++ + D++ + Sbjct: 58 GIDIMNRLRSSHPQILPVVLTSFDDDEALAESLEAGARAYIL-KTVRGAEITDVIKAVAD 116 Query: 122 -------KKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKG 174 + T PT L+ +E +L + G +I +++ + KTV +H Sbjct: 117 GRVLLDERTLTRRRVDHEDPTADLTPSERKVLDLIGDGLSNREIGEKLGVAEKTVKNHIT 176 Query: 175 NIKRKIKTHNKQVI 188 ++ K+ + + Sbjct: 177 SLLSKMGLQRRTQV 190 >UniRef50_A3XF24 Two Component Transcriptional Regulator, LuxR family protein n=3 Tax=Roseobacter RepID=A3XF24_9RHOB Length = 210 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%) Query: 110 PESLDDILGDILKKETTITSFL-NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 D+ DI K + L L+ ES ++R M G QIS ++NI KT Sbjct: 122 NYVQPDMAMDIFAKLRQAEAKRKEAERLRLTARESQVVRHLMQGMTNRQISAELNISEKT 181 Query: 169 VSSHKGNIKRKIKTHNKQVI 188 V + G++K K N+ + Sbjct: 182 VKHYVGSLKDKFGAANRLEV 201 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 29/213 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRP---SVVFINEDC 57 + +I D + R GL +L S E + + + A + R VV D Sbjct: 2 VKVLIADDHAVVRGGLRQFLSST----EEFDIVAEAANGQTALELVRTSGCDVVL--LDI 55 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + D + + +K I P+ ++F + DE+ L N S K IL Sbjct: 56 TLPDLNGLEVLKRIKRSKPDLPVLIFSMFSE---DEFALPALNAGASGYLNKDSPPAQIL 112 Query: 118 GDILKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + +P +LS E ++L + G +I +Q Sbjct: 113 AALHTVVAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQ 172 Query: 162 MNIKAKTVSSHKGNIKRKIK-THNKQVIYHVVR 193 ++ KT+S+++ I K+ N ++ +V++ Sbjct: 173 FHLSVKTISTYRARILEKLDLASNAEITRYVLQ 205 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 26/198 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D + R GL L +G++ + E +P +V ++ + + Sbjct: 4 RILIADDHAIVREGLRVLLERKGLEVPWMA--ENGRQAVCLAVKFKPDIVIMDIT--MPN 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + S + I+ P T I A+ Y+ N + +K + ++ I Sbjct: 60 MNGSIATEKIMQALPRTRVIALSMHADR---RYIDRMFNAGAIAYVLKDSAFAELFDAIQ 116 Query: 122 KKETTI---------------TSFLNMPTL----SLSRTESSMLRMWMAGQGTIQISDQM 162 TS + P +S E +L++ G T QI++++ Sbjct: 117 AVGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERL 176 Query: 163 NIKAKTVSSHKGNIKRKI 180 + KTV +H+ NI K+ Sbjct: 177 FVSIKTVEAHRRNIMNKL 194 >UniRef50_Q1MYT3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Bermanella marisrubri RepID=Q1MYT3_9GAMM Length = 198 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 1/140 (0%) Query: 48 PSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKS 107 P + D + ++S + K + + H + A L KS Sbjct: 47 PDIDLTLIDLSLGESSGLEVWKELKHIHGPIPVAILSASEEDVDIARCKRLGALGFIKKS 106 Query: 108 IKPESLDDILGDILKKETTITSF-LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L + +L E N+P + L+ + +L++ G I ++N+ Sbjct: 107 SDNAVLTHAISKMLDGEPYFPYDLSNIPNIELTPRQREVLQLLAQGLPNKAICRELNMSE 166 Query: 167 KTVSSHKGNIKRKIKTHNKQ 186 TV +H I + + + Sbjct: 167 ATVKTHLRTIFALLNVNTRT 186 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 25/207 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I++ R G+ L + G + ++ L I + P +V ++ + Sbjct: 3 ITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALRI-VEKHAPDIVLMDLT--LP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ I+ I + T + A D + + +K S D + + Sbjct: 60 VMEGAEAIREIKRRRETTKVLALTAHKK---DSLIYRTLSAGADGYLLKNASRDILFQAM 116 Query: 121 LKKETTITSF----------------LNMPTL---SLSRTESSMLRMWMAGQGTIQISDQ 161 LS E +L++ G G ++++ Sbjct: 117 QTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEK 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVI 188 + I KTV HK N+KRK+ T + + Sbjct: 177 LCISHKTVEKHKANLKRKLGTASTAEL 203 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 60.1 bits (144), Expect = 5e-08, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 82/214 (38%), Gaps = 27/214 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR---PSVVFINEDC 57 + +++D R G L + I + D+ AC+ P VV ++ + Sbjct: 5 IKILLVDDHPLVRAGFQRLL----ISDESIEIVGEADNGQSACEMYASHMPDVVIMDLNM 60 Query: 58 FI---------HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSI 108 + + I+ II+ P +V A+ F +++ +K Sbjct: 61 PSDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRC 120 Query: 109 KPESLDDILGDILKKETTITSFLNMPTL-----------SLSRTESSMLRMWMAGQGTIQ 157 P+ L + + I E IT + + SL++ E + + G+ Sbjct: 121 APDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSI 180 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 ++++M + KTV +H+ NI RK+K N + H+ Sbjct: 181 VAEEMFLSPKTVHAHRTNIFRKLKISNNSELVHL 214 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 26/206 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I D + R GL + K I ++ + P VV D + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKV-IGLAADGEEAVLKTQQLSPDVVL--LDISMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + Q ++ + + I+ + EYL NL + +K + ++ I Sbjct: 68 KQNGIQTLRRLKDMDSTIKIIMLTFHEDR---EYLFETINLGANGYVLKDAESESLIKAI 124 Query: 121 LKKETTITS--------------------FLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + L+R E +L + G +I D Sbjct: 125 RDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGD 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQ 186 + I KTV +H NI +KI +++ Sbjct: 185 CLFISEKTVKNHVSNIFKKINVNDRT 210 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 20/168 (11%) Query: 35 TVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFD-E 93 +V + + P +V D + AS + Q P +V ++H D E Sbjct: 38 SVGESLPLAHALAPDIVLT--DIRMPAASGIHLAAVFREQFPRVRVLVL----SMHDDAE 91 Query: 94 YLLVRKNLLISSKSIKPESLDDILGDILKK-------ETTITSFLNMPTL------SLSR 140 Y+ +L +K ++ I + L+ SL+ Sbjct: 92 YVRRAVSLGARGYVLKDAPAQQLIEAIEAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTP 151 Query: 141 TESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 E+S+L+ G+ +I+ M +TV +H+ +++RK++ + + Sbjct: 152 REASVLQWVSEGRSNKEIAALMGTSVRTVETHRLHLRRKLRIEGQAAL 199 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 59.7 bits (143), Expect = 5e-08, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 23/205 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R L L + E+ + +A +P V + D + Sbjct: 3 LRILLADDHQMFRHALRALL--ARDPELEVVAEAASGEEVLAIADAQP-VDLVCMDIAMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ +HP I A A+ F LL K E+ D++L I Sbjct: 60 GMDGIEATRRLLARHPALRVIGLSAFADRQFVTDLLAA---GARGYITKGEAGDELLRAI 116 Query: 121 LKKETTITSFL------------NMPTL-----SLSRTESSMLRMWMAGQGTIQISDQMN 163 + + P + L+ E +L++ G ++QI D+++ Sbjct: 117 RTVCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLH 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVI 188 I A TV H+ N+ RK+ HN + Sbjct: 177 IAASTVEVHRRNLMRKLDLHNVAEL 201 >UniRef50_D1B6Z8 Two component transcriptional regulator, LuxR family n=2 Tax=Synergistaceae RepID=D1B6Z8_THEAS Length = 211 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 10/193 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ I+ D T GL L G + + + + RP V D + Sbjct: 2 ITLILADDHPLTMEGLKALLSREGDFSV-LGEYADGESALLGITELRPQVAL--LDIRMP 58 Query: 61 DASNSQRIKLIIN-QHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 K + + + P ++ A + + + KS PE + + + Sbjct: 59 ILDGVAVAKRVTDLKLPTACLMLTSYDAKPYVAASMRAGAKGYVL-KSSPPEVICEAIRT 117 Query: 120 ILK-----KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKG 174 + + + PT LS+ E +L + G + +I+ ++ I +TV +H Sbjct: 118 VSRGRLFLDLEASDLVSSGPTEELSQREREVLLLASRGLASKEIASRLVISDRTVQAHLA 177 Query: 175 NIKRKIKTHNKQV 187 +I K+ NK Sbjct: 178 SIYGKLGARNKTE 190 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 72/214 (33%), Gaps = 30/214 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDS---QRPSVVFINEDC 57 +S +I++ + R GL L + I + D A RP ++ D Sbjct: 6 ISILIVEDQTLMRQGLRTIL----DLEESIRVVGEARDGAEGVREALRLRPDIIL--MDV 59 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + + I+ II IV D+Y+ +K + +L Sbjct: 60 QMPVMNGVEAIRAIIAAWSQARIIVLTTFDR---DDYVFQSVRAGAMGYLLKDAPAEALL 116 Query: 118 GDI------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 I L++ T LS E +L + G +I+ Sbjct: 117 QTIRRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIA 176 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +++I TV +H NI K++ N+ ++ R Sbjct: 177 GRLSITEGTVKNHVSNILAKLQAENRTQAANIAR 210 >UniRef50_P44845 Nitrate/nitrite response regulator protein homolog n=109 Tax=Gammaproteobacteria RepID=NARP_HAEIN Length = 208 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 74/197 (37%), Gaps = 13/197 (6%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L+ + D+ + + P V+ ++ + + Sbjct: 5 LKVLLIDDHPLMRRGIKQ-LVELDDNFEVVADVSSGTEGISVALQTSPDVIILDLN--MK 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESL------- 113 S +K + + + ++ + L+ K +P++L Sbjct: 62 GLSGLDTLKGLRAEGVDARILILTVSDAKNDIYTLIDAGADGYLLKDTEPDTLLEQIKRI 121 Query: 114 ---DDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + IL D +K + + P SL+ E +LR G QI+ Q+ I +TV Sbjct: 122 AQGEVILSDSIKNLLLERTHEDNPLDSLTDREMGVLRQIATGLSNKQIAAQLFISEETVK 181 Query: 171 SHKGNIKRKIKTHNKQV 187 H N+ RK+ H++ Sbjct: 182 VHIRNLLRKLNVHSRVA 198 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 59.7 bits (143), Expect = 6e-08, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 17/200 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R GL + ++ + + + T + + +P +V ++ + Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEV-VGEAATGLEALRVIEETKPDLVLMDLS--MP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESL------- 113 + Q IK I Q P+T IV + ++ L K +PE L Sbjct: 58 EMDGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKTRQVH 117 Query: 114 -------DDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 I+ +L L+R E +L G+ +I+ + I Sbjct: 118 GGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALFISE 177 Query: 167 KTVSSHKGNIKRKIKTHNKQ 186 KTV +H N+ K++ ++ Sbjct: 178 KTVKTHVSNLLAKLEVADRT 197 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 59.7 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 70/198 (35%), Gaps = 17/198 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D R G+ L S + + + D+ VV ++ + Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSV-VGEARDGQEAVAGIDAAASDVVLMDLS--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I++ HP+T +V + ++ + +L + K +P L + Sbjct: 59 VMDGVEATRAILSTHPDTRVLVLTSFSDRERVKEVLAAGAIGYVLKDAEPADLLAAVHA- 117 Query: 121 LKKETTITSFLNMPTL------------SLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + LS E+ +LR+ G Q++ + I +T Sbjct: 118 -AARGEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITERT 176 Query: 169 VSSHKGNIKRKIKTHNKQ 186 V +H G + R+I ++ Sbjct: 177 VKAHLGRVFREIGVLDRT 194 >UniRef50_P56644 Probable transcriptional regulatory protein sgaR n=2 Tax=Hyphomicrobium RepID=SGAR_HYPME Length = 211 Score = 59.7 bits (143), Expect = 7e-08, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 70/187 (37%), Gaps = 10/187 (5%) Query: 5 IMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRP-SVVFINEDCFIHDAS 63 I+D R GL L+ G + ++ I + +A +P +V + + D + Sbjct: 13 IVDQNPVVRTGLETLLVRDG--RFSVSGIYASGEDLLAALQTKPVEIVIVGWS--LPDMT 68 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + + + T I++ + + +K+ +P+ L + + + + Sbjct: 69 GGDVLTRVRKEKWRTRIIIYTGERSSEVLRTAIKSGAWGFVAKTEEPQVLLEAVVSVARG 128 Query: 124 ETT-----ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKR 178 + I + P SL+ E +L G +QI+ + I TV H N+ Sbjct: 129 RLSLPYVDIDLLNHDPLESLTARERELLAALANGWTNLQIAARTGISRNTVKYHLKNLYD 188 Query: 179 KIKTHNK 185 K+ N+ Sbjct: 189 KLGVSNR 195 >UniRef50_B9JNF6 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JNF6_AGRRK Length = 275 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 26/49 (53%) Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 LS E S+L++ M G+ QI+ ++ I TV H I RKI N+ Sbjct: 208 LSPREKSILKLVMGGESNKQIARRLEITESTVKVHIKTILRKIDVRNRT 256 >UniRef50_D1SF65 Two component transcriptional regulator, LuxR family n=1 Tax=Micromonospora aurantiaca ATCC 27029 RepID=D1SF65_9ACTO Length = 256 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 66/194 (34%), Gaps = 12/194 (6%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I+D R G+ L + ++V + ++ + RP VV D I Sbjct: 27 TLMIVDGHDLIRHGVRQILETEQDLSVVAEAGDSVTAVTVSM-AVRPDVVV--LDIEIPG 83 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSI----KPESLDDIL 117 ++ I P+T I+ + LL KS+ ++ + Sbjct: 84 GDPVGTVRRIREGSPDTAVIILSMLDGPELVRDLLEVGVRGYLHKSVARHDLVSAVRAVS 143 Query: 118 GDILKKETTITSFLNMPTLS-----LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 D + ++ LS E +L G QI+ ++++ TV H Sbjct: 144 RDRARVVLGVSRSSLDHVYGRRDEVLSPRELEVLAATAEGLSNAQIATRLSLAETTVKRH 203 Query: 173 KGNIKRKIKTHNKQ 186 NI K+ ++ Sbjct: 204 LRNIFAKLSAVSRI 217 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 23/203 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R GL L S G + + ++ P VV ++ Sbjct: 6 LRILIVDDHALAREGLKAVLTSSGFSV--VGEAADGPAAIALTEALCPDVVLMDVRLK-G 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I ++ Y+ + +K ++DD+ I Sbjct: 63 DMDGLEATRRIAALGLAARVLMLTLHDLP---AYVREALAAGAAGYVLKDTAIDDLQAAI 119 Query: 121 LKKETTITSFL---------------NMPT--LSLSRTESSMLRMWMAGQGTIQISDQMN 163 ++ T+ PT SL+ E ++ + G +I + Sbjct: 120 VRVAQGQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLG 179 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQ 186 I TV +H + K+ ++ Sbjct: 180 ISPATVKAHVERLIAKLGVTDRT 202 >UniRef50_Q3SF76 Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SF76_THIDA Length = 210 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 63/201 (31%), Gaps = 20/201 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ I++D R+G+ GY+ + + A R D + Sbjct: 5 LNIILIDDHPLLRMGVAGYIQQEPDLELTAQFANAAELRAWMAAGNRADAAL--LDRSLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 DA + + + + + DE + + +K D +L I Sbjct: 63 DADGLDLVSDLRDLGIKVIMLTIADS-----DEEISEAIASGVDGYVVKSSEPDQVLAAI 117 Query: 121 LKKETTITSFL-------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 +SF N +L+ E ++ G I+ +M + Sbjct: 118 RSVCDGQSSFPLNIMQKMARGELNNSALSALTAREMEIVDHVKEGLSNKAIAYKMTLSEN 177 Query: 168 TVSSHKGNIKRKIKTHNKQVI 188 TV +H NI K+ N+ + Sbjct: 178 TVRNHLRNIMEKLGLRNRVQV 198 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 67/206 (32%), Gaps = 24/206 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D R G L + T D S +P VV ++ + I Sbjct: 22 LHIYLIDDHPVVREGFARALSDEPDMVV-VGQAGTAADALRETASCKPDVVLVDLN--IP 78 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + Q P +V + L +K L++++ I Sbjct: 79 DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRA---GAQGYLVKTSKLEEVIEGI 135 Query: 121 LKKETTITSFL-----------NMPTL-------SLSRTESSMLRMWMAGQGTIQISDQM 162 + T P +L+ E +LR+ AG T + + ++ Sbjct: 136 RRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARL 195 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVI 188 I KTV +H+ I K+ + + Sbjct: 196 TISPKTVETHRVRIYAKLGCKSAVEL 221 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 22/203 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I + R GL L V + + E + P VV ++ + Sbjct: 3 VRILIAEDQQLVRQGLVALLAVDDVTI--VGEAEDGKGAIEMARTLAPDVVLMDLS--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I P +V + +AN + + ++K +++ I Sbjct: 59 ELDGVEATRRIKQVAPQVRVLV-LTVAN--CERRVAEALAAGADGYALKKLGHGELMAAI 115 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 T +M SL+ E +L++ G +I+D++ I Sbjct: 116 NAVCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIA 175 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 KTV +H+ I +K+ HN + Sbjct: 176 IKTVETHRTKIMQKLDLHNSAEL 198 >UniRef50_Q0VRG1 DNA-binding response regulator, LuxR family n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VRG1_ALCBS Length = 224 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 71/197 (36%), Gaps = 21/197 (10%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFIN-EDCFIHDA 62 +++ C+ L + LL++ ++ + + + CD + +V IN D + Sbjct: 17 LVVSHCN--NLAIR--LLAKSIENQRGVSCTAISSEDLFCDQIQDDLVLINVLDFSTPEI 72 Query: 63 SNSQRIKLIINQHPNTLFIVFMAI--ANVHFDEYLLVRKNLLIS--SKSIKPESLDDILG 118 + I P I+ A N+ F V K ++ S ++ ++LD++ Sbjct: 73 EG--LLGRIQEHMPLCRVILVNADRDDNIFFLLNWPVVKGVIYQQDSDALISKALDEVCK 130 Query: 119 -------DILKKETTITSFLNMPTLSL---SRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + E ML + G +I+D + + T Sbjct: 131 GRSWFPRSYMDYLVRHRKTPTRCGHIFESLTSRERQMLDHVVRGMSNHEIADAICLSTHT 190 Query: 169 VSSHKGNIKRKIKTHNK 185 V +H ++ RK+ ++ Sbjct: 191 VKAHLQSLYRKVGVKSR 207 >UniRef50_D2R1Z1 Two component transcriptional regulator, LuxR family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1Z1_9PLAN Length = 211 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 69/202 (34%), Gaps = 25/202 (12%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D RLGL L G + + T+D D+ P + D + Sbjct: 5 VLVIDDQEVVRLGLAQLLT--GTPLEVVAEAATIDQGLRLLDN--PGIALALVDVRLAGG 60 Query: 63 -SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + P+ ++F A N Y+ L + K +D++ + Sbjct: 61 EDGLAGLGRLKHAKPSLPVVMFSAFENP---TYIARAFALGAAGFIPKGMPREDLIAALE 117 Query: 122 KKETTITSFLNMP-----------------TLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 T + L++ E +L+ +G+ QI++ + I Sbjct: 118 TAGNKQTLWKRDQLRRVSSALAAARIDQQIEAPLTQREGEVLKHVCSGRTNQQIAELLGI 177 Query: 165 KAKTVSSHKGNIKRKIKTHNKQ 186 +TV H ++ KI ++ Sbjct: 178 SYETVKEHVQHLLEKIGVADRT 199 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 70/206 (33%), Gaps = 24/206 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R G + + V+ + ++ P VV D + Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSM-KVHPDVVV--MDIAMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVR-------------------KNL 101 + + K I P T ++ A + + +L + + Sbjct: 64 RLNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAV 123 Query: 102 LISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 ++P + ++ ++ K T + L+ E +L+M G I+DQ Sbjct: 124 YAGESVLQPSTTRRVIDQLINKATKTEEVSAVN--PLTDREIEVLKMAARGVSNKDIADQ 181 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQV 187 + + +T+ +H NI +K+ ++ Sbjct: 182 LYLSNRTIQTHLSNIFKKLSVGSRTE 207 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 59.3 bits (142), Expect = 7e-08, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 59/161 (36%), Gaps = 20/161 (12%) Query: 37 DDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLL 96 DD P V D + + +K ++ + T ++ +H D L Sbjct: 37 DDALQLIRDLNPDVAL--LDISMPGLNGLDVVKRVVEEKRPTRLLLL----TMHDDPTLA 90 Query: 97 VRKN-LLISSKSIKPESLDDILGDILK-------------KETTITSFLNMPTLSLSRTE 142 ++ +K + ++L IL ++ L+ + LS E Sbjct: 91 IKAEQAGALGYVVKDNAFSELLDAILAVAAGKRFVSEVVAEKVNELERLDDLPVQLSPRE 150 Query: 143 SSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTH 183 ++R+ GQ +I+ + I KTV +H+ + RK+ H Sbjct: 151 KEVVRLVADGQTNKEIARSLGISPKTVDTHRTRLMRKLNLH 191 >UniRef50_P0ACZ6 Positive transcription regulator evgA n=68 Tax=Enterobacteriaceae RepID=EVGA_ECO57 Length = 204 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 84/202 (41%), Gaps = 20/202 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ II+D + L+ + + ++ ++ +P +V I+ D I Sbjct: 1 MNAIIIDDHPLAIAAIRNLLIKNDI--EILAELTEGGSAVQRVETLKPDIVIIDVD--IP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + Q ++ + + + + I+ A + + ++ + + K E +++I+ I Sbjct: 57 GVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHC---ADAGANGFVSKKEGMNNIIAAI 113 Query: 121 LKKETTITSFL-NMPTL------------SLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + F ++ SLS+ E S++R + G+ I+++M I K Sbjct: 114 EAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKDNNDIAEKMFISNK 173 Query: 168 TVSSHKGNIKRKIKTHNKQVIY 189 TVS++K + K++ + +Y Sbjct: 174 TVSTYKSRLMEKLECKSLMDLY 195 >UniRef50_A4TWP7 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP7_9PROT Length = 213 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 84/216 (38%), Gaps = 21/216 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M I+ D R GL ++ R I + + + ++ PSV + D + Sbjct: 1 MRIILADDHVMLREGLRPFV-ERIAPGTIIQEAGSFTEALAQIEA-DPSVDLLILDIKMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANV-HFDEYLLVRK-----------------NLL 102 + Q + I + P ++ ++A+ H E + + L+ Sbjct: 59 GMNGFQGLSTIKTRFPAIRCVILSSMADRDHVLEAMRLGADGFIPKHLSGGAMVSALQLV 118 Query: 103 ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 +S + P L D + + + + ++ L+ E +L + G I+ ++ Sbjct: 119 LSGERFIPSMLMDSANNQISGASDRSPSGDLLG-RLTPRERDILHLLREGLPNKVIAARL 177 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 +++ TV SH GN+ RK+ N+ ++ T+++ Sbjct: 178 DVREVTVKSHLGNMFRKLGVQNRLQAMRMLVDTESL 213 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 42/216 (19%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFINE 55 + D R GL L DI+ + + + P V I+ Sbjct: 8 KVFLADDHPLLRTGLRMSLS-------RFADIDFIGEASDGFKAVEKIKQNPPDVALIDV 60 Query: 56 DCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD 115 D + S ++++ Q+P+ ++ + ++ HF + +K +++ Sbjct: 61 D--MPGLSGIAAVRMLRKQYPDMTLLILSSYSDKHF---IEEAMQAGADGYVLKSIDINE 115 Query: 116 ILGDIL------------------------KKETTITSFLNMPTLSLSRTESSMLRMWMA 151 + I ++E + + L+R E +L Sbjct: 116 LADLIRAFSCGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQ 175 Query: 152 GQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 GQG +IS+ + I +TV +H NI +K++ ++ Sbjct: 176 GQGNKEISNALFISTETVKTHIKNIFKKLEVKSRLE 211 >UniRef50_B8HS28 Transcriptional regulator, LuxR family n=38 Tax=cellular organisms RepID=B8HS28_CYAP4 Length = 100 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 29/52 (55%) Query: 137 SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 SLS E ++ + AG QI++++ I +TV +H NI K KT N+ + Sbjct: 11 SLSDRELQVIELIAAGLSNQQIAEKLEISKRTVDNHVSNILEKTKTGNRVAL 62 >UniRef50_B2STP5 Transcriptional regulator LuxR/uhpA family n=22 Tax=Xanthomonadaceae RepID=B2STP5_XANOP Length = 215 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 68/203 (33%), Gaps = 21/203 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D + R G+ L + + E+ + +P +V + + Sbjct: 3 IRVFLIDDHALVRTGMKMILSKEVDVCV-VGEAESGEAALPQIRQLKPDIVLCDL--HLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + I+ T I+ + + + LL S K ++L + Sbjct: 60 GVSGLEITERIVKGDYGTRVIIVSVLEDGPLPKRLL---EAGASGYVGKGGDAHELLRAV 116 Query: 121 LKKETTITSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + N P +LS E + + G I+ ++N+ Sbjct: 117 REVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLLTQGLRQEDIAKRLNLS 176 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 AKT+++HK + K+ + + Sbjct: 177 AKTINTHKARLFEKVGIQDNIAL 199 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 59.3 bits (142), Expect = 8e-08, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 78/202 (38%), Gaps = 18/202 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I D RLG+ L + G + + D+ T L P V+ + D I Sbjct: 19 INVLIADNHPVVRLGIKQVLENDGDIQV-LGDVGTTTALFQMLSKATPDVLILEMD--IP 75 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ + +++P +++ + + + SKS + L D + + Sbjct: 76 EINGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGARGYLSKSAELSYLADAVHKV 135 Query: 121 --------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L + LS E +L+M +G+ +++ +N+ Sbjct: 136 SDGGMFITNELAQRLAFDEGTQKPRRFFR-KLSTREVEVLKMLASGKRNKEVALGLNLNE 194 Query: 167 KTVSSHKGNIKRKIKTHNKQVI 188 KTVS++K + +K+ N + Sbjct: 195 KTVSTYKARLMKKLNVDNMVDL 216 >UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5F Length = 169 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 12/145 (8%) Query: 50 VVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFD--------EYLLVRKN- 100 + D I + +K I + T ++F A+ + L ++N Sbjct: 9 IELAILDIEIPGGDGLRLLKRIRAEGLKTRVLIFSAMDERIYSVRASKAGANGFLSKRND 68 Query: 101 ---LLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQ 157 +LI+ K+I L + T T L+ E ++LR G Q Sbjct: 69 IAQILIAVKTILSGYLFFPAEAVSALYHDRTRQSANRTGGLTDRELTVLRGLARGSSNRQ 128 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKT 182 I + + I KTVS++K NI K+ Sbjct: 129 IGEDLCISNKTVSTYKSNIFEKLGV 153 >UniRef50_A0K2K2 Two component transcriptional regulator, LuxR family n=9 Tax=Actinomycetales RepID=A0K2K2_ARTS2 Length = 218 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 16/152 (10%) Query: 49 SVVFINEDCFIHDAS--NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSK 106 VV ++ +Q+IK P ++ D +L S Sbjct: 56 DVVLMDLQMGAGMDGVTATQKIKAGEAGIPAPPVLIL---TTYDSDADILAAVEAGASGY 112 Query: 107 SIKPESLDDILGDILKKETTITSF-----------LNMPTLSLSRTESSMLRMWMAGQGT 155 +K + I +L T+ + P +LS E +L++ G Sbjct: 113 MLKDAPPEHIRQAVLSAAAGGTALAPEVAARLVGRIRNPEPALSAREIQLLQLLATGLPN 172 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 I+ ++ I TV +H +I K+ N+ Sbjct: 173 RAIARRLFISEATVKTHLVHIYGKLGVDNRTA 204 >UniRef50_Q11LI0 Two component transcriptional regulator, LuxR family n=2 Tax=Rhizobiales RepID=Q11LI0_MESSB Length = 216 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 66/207 (31%), Gaps = 25/207 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D R L L + I + A+ P + + D + Sbjct: 1 MKVLLVDDHVLIRDALRSVLREVWDRAAIIEAAD--ARQAMHSIEANPDLDLVLLDLTLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I +HP ++ A + + + L + K + +L + Sbjct: 59 DGNGFDTLSRIRERHPAMAVVILSASDDR---DAITRAFELGVVGFIPKSAQREVMLSAL 115 Query: 121 LKKETT--------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + ++ L L+ + +L + M G+ I Sbjct: 116 KLVFSGGIYVPPEVLGRPQPPPATARPELSPSLSKLGLTERQLEVLALMMQGKSNKAICR 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQV 187 +++I TV +H I + +K N+ Sbjct: 176 ELDIAEPTVKNHVTCILKALKVSNRTE 202 >UniRef50_C6P401 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P401_9PROT Length = 228 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 71/207 (34%), Gaps = 22/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R G+ Y+L + + EI D D P V D + Sbjct: 3 IKVLMADDHALFRDGMR-YVLQQLADEVEILDSGNFQDALQLV-HDNPDVDLALLDLNMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSK-------------- 106 + I+ +HP+ +V + E ++ + SK Sbjct: 61 GSEGVPSIQFFHLRHPDIPLVVVSGSDHRDDIESVMESGAMGFISKMSSSKIMLSALRMV 120 Query: 107 -----SIKPESLDDILGDILKKETTITSFL-NMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + P+ L + ++ + E+ + L+ + +L +G +IS Sbjct: 121 LEGGVYLPPQLLQQAVNNVDQGESLSSKRSQRAAKFGLTSRQLEVLTYLASGLANKEISK 180 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQV 187 +MN+ TV H + + + +++ Sbjct: 181 RMNLAEGTVKIHTAAVYQALHANSRLE 207 >UniRef50_C2BHD6 Possible response regulator n=1 Tax=Anaerococcus lactolyticus ATCC 51172 RepID=C2BHD6_9FIRM Length = 196 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 11/192 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVV-FINEDCFI 59 M II+D L + ++ EI+ + V + D + Sbjct: 1 MKIIILDD----HKNFGESLRALLMENVEISRCDFVSAIEEFYKKIETDSYNICLLDINL 56 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 S +K + + ++ + N + + L +L + K ++ Sbjct: 57 DKNSGFDVLKNLRAKKFGFKILILSSYTNPIYKKKSL---DLGAAGYISKSIDSKSLIEK 113 Query: 120 ILKKETTITSFLNMPTL--SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIK 177 I + SF N L++ E +L+ + G+ QI+ + I +T+ H NI Sbjct: 114 ICQINNGF-SFTNEKHFENPLTKREEEVLKALITGKTNTQIAKDLYISERTLYHHIENIY 172 Query: 178 RKIKTHNKQVIY 189 K+K NK +Y Sbjct: 173 EKLKVENKVELY 184 >UniRef50_UPI0001C342BD hypothetical protein EcanA3_16147 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C342BD Length = 183 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 63/153 (41%), Gaps = 6/153 (3%) Query: 45 SQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLIS 104 S PS + + D I + ++ I+ + P ++ ++ + + E L+ R + I Sbjct: 27 SASPSAIVM-IDGNIIQDNGMALLEEIVYRFPGARVVMVLSRKDPRWVEQLMKRNVMAIV 85 Query: 105 SKSIKPESLDDILGDI---LKKETT--ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 ++ +PE L + + + +LS + +L++ AG+ +I Sbjct: 86 PRNARPEIFSAALDSVCAGMACMPGEWLQPQPQQELSALSDRQHDVLKLLAAGESNKEIG 145 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +NI A TV +H + R++ N+ + Sbjct: 146 RSLNISAATVKAHLETVFRRLDVKNRTQAAMIY 178 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 29/202 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQ------RPSVVFIN 54 +S +++D R G L S+G D+ V + A D+ P VV Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQG-------DLHVVAEADNAADAYGAFKAHDPDVVV-- 59 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVF-MAIANVHFDEYLLVRKNLLISSKSIKPESL 113 D + AS + I+ I + P +VF M V + ++ KS +P ++ Sbjct: 60 LDISMPGASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGASGFVT-KSSEPSAV 118 Query: 114 DDILGDILKKE--------TTITSFLNMPTLS----LSRTESSMLRMWMAGQGTIQISDQ 161 + + + + E + PT S L E +LR + G T QI+ Sbjct: 119 VNAIRSVARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATH 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTH 183 +N+ KTV ++ IK K Sbjct: 179 LNLSVKTVQNYHYLIKTKTGAR 200 >UniRef50_C9XUR7 Putative HTH-type transcriptional regulator yhjB n=1 Tax=Cronobacter turicensis RepID=C9XUR7_CROTZ Length = 218 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 76/193 (39%), Gaps = 10/193 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ +++D S G+ L + + + I + D++ S++ ++ D Sbjct: 19 MNVLMVDKQSIFIEGMASVL-KQFIPEITICGLNNPDEINTTLGYFPASLILLDGDAG-- 75 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD- 119 + N + + +HP ++ + L + PE++ L Sbjct: 76 KSVNIDLLDDLAQRHPALPVVLLVNQCQPALLRLFLRHHVAAFVRRDSPPEAIVQTLRAA 135 Query: 120 ----ILKKETTITSFLNMPTL--SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 + + +I+ + P LS + +L++ AG+ QIS +NI A TV +H Sbjct: 136 AMGMLCFPQESISLLDSGPGTLARLSERQREILKLLAAGESNKQISRHLNISAGTVKAHL 195 Query: 174 GNIKRKIKTHNKQ 186 +I R++ N+ Sbjct: 196 ESIFRRLNVTNRT 208 >UniRef50_B8KRZ2 Two component transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRZ2_9GAMM Length = 226 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 36/188 (19%), Positives = 72/188 (38%), Gaps = 15/188 (7%) Query: 20 LLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTL 79 ++S E+ + V+ + SQ+P V + D + A + + Q Sbjct: 21 VISASDLDAEVMTVADVETVQKHLLSQKP-VDLLMLDLHMPGAVGFSVLSWSLAQRQRLP 79 Query: 80 FIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKE----TTITSFLNMPT 135 I+ A + L SKS +PE + +G ++ E + + + Sbjct: 80 IIIISANTHPETVRRALDHGAAAFLSKSAEPEVIVSTIGRVIAGERGLHPGLETSSRGES 139 Query: 136 LS----------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 LS ++ + ++ M + GQ QI+ ++ +K TV +H I RK+ H++ Sbjct: 140 LSGLDAAEAIATMTAQQFRVVSMLVEGQLNKQIAYELGVKEATVKAHMTEIFRKLGVHSR 199 Query: 186 QVIYHVVR 193 V+ Sbjct: 200 TQAALVLN 207 >UniRef50_Q8DG77 Two-component response regulator n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DG77_THEEB Length = 214 Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 77/203 (37%), Gaps = 24/203 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDI---ETVDDLAIACDSQRPSVVFINEDC 57 ++ +I D RL ++ +L S G +P ++ D Sbjct: 3 LTVLIADDDPGIRLSVSRFLESEG------YCCLMAGDGAQALEMIHHYQPHLLIT--DI 54 Query: 58 FIHDASNSQRIKLIINQHPNTLFI--VFMAIANVHFDEYLLVRKNL-LISSKSIKPESLD 114 + + + + ++ I QHP+ + +++ + R + +K L Sbjct: 55 AMPNMNGYELVRQ-IRQHPSLRLLPVIYLTARTELEERIRAYRTGGDVYLAKPFDLNELA 113 Query: 115 DILGDILKKETTITSFLNMP---------TLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 ++ ++L + + + L++ E +L + +AG QI D++++ Sbjct: 114 AVVRNLLDRAQLVQMEWQQRQHAPKGQRVRVDLTQREKDVLALLVAGLSNAQIGDRLHLS 173 Query: 166 AKTVSSHKGNIKRKIKTHNKQVI 188 A+T+ H ++ +K HN+ + Sbjct: 174 ARTIEKHVSSLFQKTAVHNRAEL 196 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 77/218 (35%), Gaps = 28/218 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I+D R G+ L + + + D P V+ ++ + Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQFVI-VGEAADGSEALRLADELSPDVILVDLS--LP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFM-------------AIANVHF----------DEYLLV 97 + + + + + P I+ A A+ + D V Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGASAYCTKDIEPEQLIDVITRV 120 Query: 98 RKNLLISSKSIKPES-LDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTI 156 + + ++ + + + D ++ + + + L+ E +L G Sbjct: 121 ARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSNK 180 Query: 157 QISDQMNIKAKTVSSHKGNIKRKIKTHNK-QVIYHVVR 193 +I+ +NI +TV +H +I RK+ +++ Q + + +R Sbjct: 181 EIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALR 218 >UniRef50_C4UWZ6 LuxR-family transcriptional regulatory protein n=1 Tax=Yersinia rohdei ATCC 43380 RepID=C4UWZ6_YERRO Length = 208 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 34/195 (17%), Positives = 75/195 (38%), Gaps = 11/195 (5%) Query: 10 SYTRLGLTGY-LLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRI 68 Y + + ++ I ++ + Q ++ + D I + Sbjct: 15 FYLKQAIENISIMRSKRGNVSIRICYSLSEFENEIQEQDNPIIIFDLD-GIEKFEQFRLF 73 Query: 69 KLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL-----KK 123 KL + + +F + + L + + I SK+ ++ + ++ + Sbjct: 74 KLAKEKVSHCRLFLFTSESEGSGSYTTLKQVSPFILSKTASQSQIETMFYQLIFCFKAVQ 133 Query: 124 ETTITSFLNMPT----LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 +T I++ + T +L+ ES + R ++G +I + I KTVSSH+ NI K Sbjct: 134 KTKISAEKTLCTHKDKTALTHRESEICRHLLSGLSNKEIGILLGISNKTVSSHRTNIYGK 193 Query: 180 IKTHNKQVIYHVVRL 194 + N +Y V++ Sbjct: 194 YQAKNLIELYSRVKI 208 >UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA Length = 265 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 34/223 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSR------GVKKREINDIETVDDLAIACDSQRPSVVFIN 54 +S I++D G+T L G R + + A RP V+ I+ Sbjct: 32 LSVIMLDDHEVVLSGITYQLKRERDIAVLGTFSRSRQLFDYLAQHGPALAHTRP-VLLID 90 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 D I+ + Q P +V + + K +L+ Sbjct: 91 YALGPQDTDGIALIRRLCVQFPVCPILVVSGHLQP---SIVRLALMAGARGYIGKDCTLE 147 Query: 115 DILGDILKKETTITS-FLNMPT-----------------------LSLSRTESSMLRMWM 150 +++ I + + ++ LS E +LR+ + Sbjct: 148 ELVDAIRRVASGEKYVHPSLAERDDLVPPAAIEMRRGDTGRATLASLLSPRELEVLRLTL 207 Query: 151 AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 G QI+++++ KT+S+ K + RK+ + ++ + R Sbjct: 208 QGFEVGQIAEKLSRSNKTISTQKRSAYRKLGISGDRELFKLER 250 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R G LLS + E+ + D C S P VV D + Sbjct: 1 MKIVIADDHAVVRQGYAS-LLSAMLAPCEVLEAGNGDQAYSLCQSDSPDVVI--MDVNMQ 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + I+ + P+T + F + L +KS PE L + + + Sbjct: 58 GISGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGAKGYITKSCTPEILIEAVKKV 117 Query: 121 --------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L + +++ E + M G +IS+Q+ I + Sbjct: 118 SAGQLYVEHELAMRLAVSRPEQKDKRLKE--MTQREFEIFVMLAQGSNVKEISEQLCISS 175 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHV 191 KTVS++ +K K+ + + H+ Sbjct: 176 KTVSNYTAILKSKLNIGSTAELVHL 200 >UniRef50_C5A924 Two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A924_BURGB Length = 218 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 60/171 (35%), Gaps = 11/171 (6%) Query: 29 EINDIETVDDLAIACDSQRPS---VVFINEDCFIHD---ASNSQRIKLIINQHPNTLFIV 82 I + A R ++ + D + + + P+ IV Sbjct: 35 SITVVHVSHSGAELLQQLRADPCEMIITDLSMGTSDHADQDGLKLVSALRKNWPSARVIV 94 Query: 83 FMAIANVHF-DEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLN----MPTLS 137 + A+ + L + + ++ + E L + ++ T ++ L P + Sbjct: 95 YTALNHPALAQRLLYLGAHAVVCKEDSLEELLAAVDQVAVQGSTYLSKQLRGTAPAPASA 154 Query: 138 LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 L+ E +LR G + IS +M + TVS+HK N K+ + + Sbjct: 155 LTPRELEVLRHIGCGLSVVDISRRMFVTVSTVSTHKRNAMDKLNIRSTVEL 205 >UniRef50_A1T4U2 Two component transcriptional regulator, LuxR family n=8 Tax=Actinobacteria (class) RepID=A1T4U2_MYCVP Length = 220 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 25/161 (15%) Query: 45 SQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLIS 104 P +V + + +S + + + P+ ++ + ++YL + S Sbjct: 51 ELDPDIVLCDVR--MQGSSGLDVCQQLRERDPDRKVVML---SVYDDEQYLFQALRVGAS 105 Query: 105 SKSIKPESLDDILGDILKKETTITS-FLNMP-------------------TLSLSRTESS 144 +K S ++++ + T+ +M L++ ES Sbjct: 106 GYLLKSISSEELVKQLESVHGGQTAIDPSMAARAADTAARMQRDEFWPGARRGLTQRESE 165 Query: 145 MLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNK 185 +L + + G I+ ++ I +TV +H +I RK+ ++ Sbjct: 166 ILALVVNGLSNRAIAAKLIIGDETVKTHLSSIYRKLGVSDR 206 >UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=Gardnerella vaginalis RepID=D2RAB0_GARVA Length = 217 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 25/180 (13%) Query: 33 IETVDDLAIAC-DSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHF 91 + C P V+ ++ + + S IK I ++ N IV + I + Sbjct: 36 CSSAKQAIHRCVTENTPDVLLVDMS--MREMSGVDVIKAIRERNSN---IVLIGITSYML 90 Query: 92 DEYLLVRKNLL---ISSKSIKPESLDDI-----------LGDILKKETTITSFLNM---- 133 DEY+L + K + + I L + T NM Sbjct: 91 DEYVLQVAKSGGQALVHKDNLADVVAAIQSRATSYGCPELPQYIDYFHTPQESFNMISQL 150 Query: 134 -PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 T LS ES ++R+ G + +I+DQ+N+K TV++H I K++ ++ V+ Sbjct: 151 PKTSVLSPQESEIMRLCKQGYSSKEIADQLNVKVSTVNTHLRRIYGKLQVKSRMQALAVL 210 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 63/171 (36%), Gaps = 20/171 (11%) Query: 38 DLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVF------------MA 85 + RP VV ++ + + + + + I P+T I+ + Sbjct: 34 EAVRLAQELRPDVVVLDVT--MPELNGLEATREIRASVPDTEIILLTVHDSDQLLGQALD 91 Query: 86 IANVHF------DEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLS 139 + +L+ + L P + G+ +E SL+ Sbjct: 92 AGARGYVLKEDAARHLVDAIDALSKHAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLT 151 Query: 140 RTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 + E +LR+ G +++ Q++I AKTV +H+ N+ RK+ + + H Sbjct: 152 QREREVLRLLAQGDSNREVAGQLSISAKTVETHRANVMRKLGASSIVDLVH 202 >UniRef50_C0YMY4 Response regulator n=2 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YMY4_9FLAO Length = 204 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 79/201 (39%), Gaps = 14/201 (6%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D R+G T +L + E++ ET D+ +S ++ D + Sbjct: 4 KILIADDHHVVRIG-TALILEKNFNDIEVDFAETYDEAKQKIESGTFDLLI--LDIELPG 60 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + +K I + P T ++F + +Y+ N + +K PE + I Sbjct: 61 SILKSMVKEIKSISPETFILIFTSYKENIALQYIEEGANGFL-NKQSDPEHFVKAVEVIF 119 Query: 122 KKETTITSFLNMPTLS----------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 K TS + L LS E + + G G ++I++ +NI+ TV + Sbjct: 120 KDGYYYTSEMMNEILKGNQRKKAIENLSERELQVFNLLAKGNGNLEIANTLNIEESTVGT 179 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 +K + +K+K N + + Sbjct: 180 YKRRVYQKLKISNLVELLEIY 200 >UniRef50_A4TWP9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TWP9_9PROT Length = 222 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 69/205 (33%), Gaps = 21/205 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M ++ D + R GL +L R + + + D+ I ++ D + Sbjct: 4 MEILLADDHAMVRDGLVPFL-QRVTDNASVLEAGSFDEALIKARQAS-NLGLTILDLNMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANV------------------HFDEYLLVRKNLL 102 + + + P+ ++ + E ++ L+ Sbjct: 62 GMDGLNGLATMRAEFPHVPVVILSGSTHPADAFHSIESGANGFIPKTMRGETIIGVLRLV 121 Query: 103 ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 +S + P L D + +KE T P LS E +L M + G I+ Sbjct: 122 LSGEKYVPPFLFDYHETMNRKEPENTGKSG-PLAVLSAREMEILGMIVDGAPNKVIARAF 180 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQV 187 ++ TV +H NI RKI N+ Sbjct: 181 ELQEVTVKAHLRNIFRKIAVSNRTE 205 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 58.6 bits (140), Expect = 1e-07, Method: Composition-based stats. Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 26/203 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + T + P V+ D + Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQI-VGEAGTGREAVQMAQKLTPDVIL--MDIAMP 87 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I P+ +V ++ D+Y+ S IK + +D++ + Sbjct: 88 LMNGLEATRKIAEVAPSAKVLVL---SSYGEDDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 LKKETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + F + L+ E L +AG+ I+ Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 161 QMNIKAKTVSSHKGNIKRKIKTH 183 M I KTV H+ + K+ H Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIH 227 >UniRef50_C7RKP7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RKP7_9PROT Length = 216 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 15/200 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R GL + S + + D+ + + + RP V ++ + Sbjct: 8 VTVMVVDDHAALRAGLRSVIDSDPGLRV-VLDVPSGEVAYAQYQTLRPDTVVMDLS--ME 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ I ++ P +V+ + E L L +K ++L + I Sbjct: 65 GFGGIEAIRRIRSRDPQAAILVYTVHNSRVLLERALEAGALGFVTKGSDIDTLLQAIKRI 124 Query: 121 LKKET--TITSFLNM--PTLS--------LSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 +E+ + + L++ E + ++ G + +D +N+ +KT Sbjct: 125 ASRESFVSPDMLPALLDRHFPAGGVSFDRLTQREFQVFKLLSEGHALPECADILNLSSKT 184 Query: 169 VSSHKGNIKRKIKTHNKQVI 188 VS+H I+ K+ + + Sbjct: 185 VSNHFTQIRAKLGVDSPAEM 204 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 15/202 (7%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +++D + R G L + K + + + +P +V ++ + Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKV-VAEAGDGAEAYRLFKQVKPDLVIMDLT--MPG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + +K I P +VF N F + +KS PE+L D+L Sbjct: 63 LGGVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGAKGYVTKSSPPEALIRGAFDVL 122 Query: 122 KKETTITSFLNMP------------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + +++ ++ T L+ E +LR+ +A + T I+ + + KTV Sbjct: 123 QGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPKTV 182 Query: 170 SSHKGNIKRKIKTHNKQVIYHV 191 ++ + IK K+ + + V Sbjct: 183 ANTRYLIKAKLGVASDIELVLV 204 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 21/200 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVK---KREINDIETVDDLAIACDSQRPSVVFINEDCF 58 +++D + R G+ +L + + L A +RP +V D Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYVVGEADGGEAALAWLERAGARERPDLVIT--DIG 77 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + + Q+P +V N+ EY +K D+++ Sbjct: 78 MRGMGGIALTAALHEQYPEIAVLVVSMHDNL---EYARQAVRAGARGYVLKDAPADELMA 134 Query: 119 DILKKETTITSFL---------NMPTLS----LSRTESSMLRMWMAGQGTIQISDQMNIK 165 I + MP L+R E +L G +I+ Q+ + Sbjct: 135 AIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGVS 194 Query: 166 AKTVSSHKGNIKRKIKTHNK 185 +TV +H+ N+KRK+ + Sbjct: 195 VRTVETHRLNLKRKLGIEGR 214 >UniRef50_A1BJU3 Two component transcriptional regulator, LuxR family n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BJU3_CHLPD Length = 203 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 72/198 (36%), Gaps = 16/198 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ II D R GL+ L K + + + ++P V ++ + Sbjct: 2 ITIIIADDHKIFRQGLSRLLADDDRFKL-LGEASNGKEALNLIWKEKPQVAVLDLS--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I H NT I+ ++ E + + +K + ++I I Sbjct: 59 RPDGLEVVSSIRAAHSNTRCIILTMKDDI---ETVRRALESGVYGYVLKEAAYEEIAEAI 115 Query: 121 LKK----------ETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 +K + + + L+ E +LR + G + QI+ ++ I +TV Sbjct: 116 VKVADNKLYLGRFQDNPNLYASCCEGQLTNREVEVLRCVVRGLTSRQIASELFISHRTVE 175 Query: 171 SHKGNIKRKIKTHNKQVI 188 +H+ +I K+ + Sbjct: 176 THRQHIMEKLNIRTATGL 193 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 15/196 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R+GL + + + + + P + ++ + Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEV-VAEAADGAQALELFAKCNPDLALMDLR--MP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S Q I N+ ++ A DE + +K + + ++ + Sbjct: 64 VKSGVQATLEIRNRFATACVLMLTAFDG---DEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L S E +L G +I+D +NI T Sbjct: 121 RAVAAGQRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180 Query: 172 HKGNIKRKIKTHNKQV 187 H +I K++ ++ Sbjct: 181 HLKSILAKLRVADRTE 196 >UniRef50_D0WI20 Transcriptional regulator, LuxR family n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WI20_9ACTN Length = 566 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 27/54 (50%) Query: 133 MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 + L+ E+ +L W G + I ++ I TV +H G+I K KT N+Q Sbjct: 503 VRRYGLTPREAEILGYWAGGYSSPYIEKKLFISKSTVKTHLGHIYEKTKTSNRQ 556 >UniRef50_Q0AL13 Two component transcriptional regulator, LuxR family n=1 Tax=Maricaulis maris MCS10 RepID=Q0AL13_MARMM Length = 201 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 32/193 (16%), Positives = 76/193 (39%), Gaps = 8/193 (4%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIAC-DSQRPSVVFINEDCFI 59 M +I D + LL + E+ + + +++ + D R +V ++ + Sbjct: 1 MKILIADDHDLVLDAVRA-LLENDIPDAEVELVRSGNEVERSLSDGNRYDLVLLDLR--M 57 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + Q ++ ++ +H + + +A+ + LL K++ + L + Sbjct: 58 PGIAGVQDVRDLMKRHADQPVAILSGMASPMEVQMLLENGARGFIPKTMPADGLVAAVRL 117 Query: 120 IL--KKETTI--TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGN 175 IL + + I T+ SL+ E +L G+ +I+ + I+ TV H + Sbjct: 118 ILAGQVFSPIHHTTDPENEPASLTPREREVLFCLQRGEANKEIARSLEIQETTVKLHLRS 177 Query: 176 IKRKIKTHNKQVI 188 + K+ N+ + Sbjct: 178 LSLKLDARNRTEV 190 >UniRef50_C9QEV1 Response regulator VbsA n=2 Tax=Vibrio RepID=C9QEV1_VIBOR Length = 199 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 14/192 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ +I+D L + + I + + ++ D + Sbjct: 1 MNILIVDDHPLVCAALKNVIEDN-FENATIVQAFNAKKAFVYLAENKVDILI--LDIELG 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + IV + + + + S K ES+ + I Sbjct: 58 DDDGFDLLHKAKGFGFDGKVIVVSSKDEKLCSD---LAISAGASGYLDKKESVSRVADAI 114 Query: 121 LKKETTITSFLNMPTLS--------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + T F S LS ESS+LR+ + G +I+ +M+I KTVS++ Sbjct: 115 KAVNSGYTYFRQANAASTQGTGAIKLSTRESSVLRLLLDGHTNKEIARRMDISEKTVSTY 174 Query: 173 KGNIKRKIKTHN 184 K I K + Sbjct: 175 KRRILDKYDVRS 186 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 21/201 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R GL +L +R + + + E +D ++RP VV ++ + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEI-VGEAENGEDALTFVRTERPDVVLMDLS--MP 71 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I ++ ++ +Y+L +K + ++ I Sbjct: 72 KMDGIEATKQIKQYDETIKILIL---SSFSEQDYVLPALEAGADGYQLKEVQPEQLVASI 128 Query: 121 LK-KETTITSFLNM--------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + E + P L++ E +L+ G+ +I+ +++I Sbjct: 129 IAIYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHIT 188 Query: 166 AKTVSSHKGNIKRKIKTHNKQ 186 +TV +H NI K++ ++ Sbjct: 189 EQTVKTHVSNILAKLEVDDRT 209 >UniRef50_A3D3Y4 Two component transcriptional regulator, LuxR family n=46 Tax=Proteobacteria RepID=A3D3Y4_SHEB5 Length = 214 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 19/207 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D S GL G L I +E + C RP +VF++ + Sbjct: 9 INILVVDDHSLIFDGLLGCLAPYPELNL-IGSVEDGLAVYEKCLKLRPDLVFMDLK--LP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAI-ANVHFDEYLLVRKNLLISSKSIKPESLDDI--- 116 I+ + + P + I+ A E L V N + S K L I Sbjct: 66 GMGGFDVIRQLRQRWPEMMIIMLTATVEEKSAREALDVGANGYVLKYSPKSTLLAAIKCV 125 Query: 117 ------LGDILKKETTITS----FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + L + +MP L+ E +L++ G+ I++ + I Sbjct: 126 CKGKNFIDPSLDERQIAALSGVVDGDMP--LLTPREQQVLKLICEGRRNRDIAEDLVIGL 183 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVVR 193 KTV +H+ N+ RK+ HN + H V+ Sbjct: 184 KTVETHRMNLMRKLNAHNVAELMHWVQ 210 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 67/204 (32%), Gaps = 23/204 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L ++ + + D +P VV ++ + Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTV-VGEAGDGDQAVQQYRDLKPDVVLMDLA--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q I+ I PN +V A DE +L S +K +DI + Sbjct: 59 GTDGVQAIQEIKRIDPNARVVVLTA---YDTDERILQAVQAGASGYLLKGAPREDIFRAV 115 Query: 121 -LKKETTITSFLNMPTLSLSR----------------TESSMLRMWMAGQGTIQISDQMN 163 + + L+R E +L + G +I+ +++ Sbjct: 116 RVVYRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELS 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQV 187 I +TV H I RK+ + Sbjct: 176 ITERTVKFHANAIYRKLDVSGRTE 199 >UniRef50_Q391P2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. 383 RepID=Q391P2_BURS3 Length = 216 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 65/162 (40%), Gaps = 17/162 (10%) Query: 42 ACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNL 101 A + RP + I+ D + I+ I + +P+T + ++ + E + L Sbjct: 43 AVRTHRPDIAVIDLMLG--DTLALRLIETIAHTYPDTAVVCISMHSDAAYAEPAALAGAL 100 Query: 102 LISSKSIKPESLDDILGDILKKET---------------TITSFLNMPTLSLSRTESSML 146 +K+ ++ D + +L+ + P +LS E +L Sbjct: 101 GYVNKANVSRTILDAIDSVLRGVPYFPPEVQQNLLRRARGQAAKPTTPLAALSPREIEIL 160 Query: 147 RMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 RM G QI++++ A TV +H+ NIKRK+ N + Sbjct: 161 RMIGEGLTKQQIAERIGHSANTVEAHRTNIKRKLGLDNNAEL 202 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 14/158 (8%) Query: 38 DLAIACDSQRPSVVFINEDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLV 97 + P V+ ++ + S + ++I + P + IV DE + Sbjct: 59 EAVALARKHSPDVILMDLR--MPGMSGVEATEVIRAERPESAVIVL---TTYQGDEDIRK 113 Query: 98 RKNLLISSKSIKPESLDDILGDILKKETTITSFLN---------MPTLSLSRTESSMLRM 148 S +K S +L I T T F + +LS E +LR+ Sbjct: 114 ALAAGAQSYLLKGMSHLKLLEAIRSVRTGHTYFPRAIRNSVPGKLNRAALSPREMDILRL 173 Query: 149 WMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 + G +I+D +NI TV H I R++ +++ Sbjct: 174 IVRGLSNQEIADALNITRGTVKWHVNIILRRLDVNDRT 211 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 69/217 (31%), Gaps = 43/217 (19%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAI------ACDSQRPSVVFIN 54 + +I+D + R G+ L + DIE V S P VV Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKA-------DIEVVGQAGNGREALELVASLDPDVVL-- 53 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIK----- 109 D + + + + + P I+ H DE +L +K Sbjct: 54 MDVMMPVMDGVEATRKLAERGPRPAVIML---TTFHDDERVLQSIAAGARGYLLKDVDHR 110 Query: 110 -----------------PESLDDILGDILKKETTI---TSFLNMPTLSLSRTESSMLRMW 149 P+ + +L + T +S + T L+ E +LR+ Sbjct: 111 VLADSIRTVAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLL 170 Query: 150 MAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 G +I +Q+ + TV +H I K+ ++ Sbjct: 171 AQGYTNQEIGEQLALSVGTVKNHLSVIFAKLAVRDRT 207 >UniRef50_A6SW03 DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SW03_JANMA Length = 213 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 75/205 (36%), Gaps = 16/205 (7%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 S +++D + R GLT L + +I+ + + ++ +++ S+ D ++ D Sbjct: 3 SVLLIDDHAMFREGLTLALT-QADPTLQIHCVASGNEALQLLETET-SISTAMMDYYLPD 60 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 ++ + P + A + + L KS ++L L ++ Sbjct: 61 IGGGALLQRLRQLRPGLRILALSASEDPDDVRHALASGAHGFIHKSADSKTLFAALSSVM 120 Query: 122 K-------------KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + ++ L+ + +LR+ G +I+DQ+ + KT Sbjct: 121 QGRGYLPPTFKLDTHDGGSNDDASL-LSRLTPRQMEVLRLMCDGLRNGEIADQLGMTEKT 179 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVVR 193 V +H + + N+ V R Sbjct: 180 VKAHVSAVLSGLGVLNRTQATVVAR 204 >UniRef50_B2IZX5 Two component transcriptional regulator, LuxR family n=2 Tax=Cyanobacteria RepID=B2IZX5_NOSP7 Length = 206 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 31/185 (16%), Positives = 72/185 (38%), Gaps = 11/185 (5%) Query: 13 RLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQRIKLII 72 R GL+ + + + +D+LA +P VV I+ + + + + + Sbjct: 10 RAGLSAVVTTNPRLTV-VGSASDLDELAREVGQLQPDVVLIDLSANLQQSVWEKLLLIQE 68 Query: 73 NQHPNTLFIVFMAIANVHFDEYLL--VRKNLLISSKSIKPE--------SLDDILGDILK 122 Q+P + + ++ + L +R L +S ++ L + D ++ Sbjct: 69 QQYPLGTIAIIEELDSIDLETALRSGIRGILPSTSTELEIVAAVEAIAFGLVVLHPDAIE 128 Query: 123 KETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKT 182 + + P +L+ E +L M +G G ++ ++ I TV H +I +K+ Sbjct: 129 LLSIREKVVANPVQTLTPREIEVLGMLGSGLGNKAMAKRLQISEHTVKFHLSSIFQKLSV 188 Query: 183 HNKQV 187 ++ Sbjct: 189 SSRTE 193 >UniRef50_B9ZR28 Transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZR28_9GAMM Length = 232 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 35/73 (47%) Query: 114 DDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHK 173 ++ +++ + P L++ E +L M +G+ + I+ Q+ I TV SH Sbjct: 131 RHLMTRLVRLYRQQRTNTYRPACGLTQRELEILAMLGSGETNMNIAKQLFISEHTVKSHL 190 Query: 174 GNIKRKIKTHNKQ 186 NI RKI+ N+ Sbjct: 191 YNIFRKIEVKNRT 203 >UniRef50_C1PE24 Two component transcriptional regulator, LuxR family n=1 Tax=Bacillus coagulans 36D1 RepID=C1PE24_BACCO Length = 217 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 72/204 (35%), Gaps = 26/204 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 S +++D G L + G + I + + + +S V I D + Sbjct: 4 SILVIDDHRLVASGTKSLLQNAGFEAEAIFSADYLKE---KIESANYDVFLI--DWSFPE 58 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL---ISSKSIKPESLDDILG 118 + + K II P I++ E +V L+ IS K S++ ++ Sbjct: 59 VNGLEISKKIIKLQPQAKIIIYTG----FDSELAIVLDQLIEEGISGIISKTASVNTLIN 114 Query: 119 DILKKETTITSFLN--------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + + + F N S E ++ + G +I+ ++ I Sbjct: 115 AVHAVISGYSIFPNTLVKESVYTLRLKKETENLFSEREIEIIECLIDGDTNKEIAAKLYI 174 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVI 188 ++V +I +K+ H+++ + Sbjct: 175 TQRSVEYQLRSIYKKLGIHSREQV 198 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 21/204 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYL---LSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDC 57 + I++D + R G+ L V + E + D + P +V D Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLT--DI 62 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + S + L ++ P +V N+ EY+ +K +++ Sbjct: 63 SMRGMSGIELAALFQHRFPGIDVLVLSMHNNL---EYVKRAIESGAKGYVLKDAPAQELV 119 Query: 118 GDILKKETTITSFLNM-------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 I T F L+ ES+ L G QI+ ++++ Sbjct: 120 NAIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSM 179 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVI 188 +TV +H+ N++RK++ + + Sbjct: 180 SVRTVETHRLNLRRKLRITGQAEL 203 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 202 5e-51 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 198 8e-50 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 197 2e-49 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 197 2e-49 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 194 1e-48 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 194 1e-48 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 194 2e-48 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 193 2e-48 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 193 4e-48 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 191 9e-48 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 191 1e-47 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 191 1e-47 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 191 2e-47 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 190 2e-47 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 190 2e-47 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 190 3e-47 UniRef50_B1ZY58 Two component transcriptional regulator, LuxR fa... 189 4e-47 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 189 4e-47 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 189 5e-47 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 189 7e-47 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 188 9e-47 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 187 1e-46 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 187 1e-46 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 187 2e-46 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 187 2e-46 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 187 2e-46 UniRef50_Q024A4 Two component transcriptional regulator, LuxR fa... 187 3e-46 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 186 3e-46 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 186 4e-46 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 186 5e-46 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 185 7e-46 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 185 7e-46 UniRef50_B4D831 Two component transcriptional regulator, LuxR fa... 185 8e-46 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 184 1e-45 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 184 1e-45 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 184 1e-45 UniRef50_D1CI66 Two component transcriptional regulator, LuxR fa... 184 1e-45 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 184 1e-45 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 184 1e-45 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 184 2e-45 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 184 2e-45 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 183 3e-45 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 183 3e-45 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 183 3e-45 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 183 4e-45 UniRef50_B3RA82 Response regulator protein; Response regulator r... 183 4e-45 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 182 4e-45 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 182 4e-45 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 182 5e-45 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 182 5e-45 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 182 5e-45 UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 T... 182 6e-45 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 182 6e-45 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 182 7e-45 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_B1ZU87 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 181 1e-44 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 181 1e-44 UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=P... 181 1e-44 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 181 1e-44 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 181 2e-44 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 181 2e-44 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 181 2e-44 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 180 2e-44 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 180 2e-44 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 180 2e-44 UniRef50_C0GJ72 Two component transcriptional regulator, LuxR fa... 180 2e-44 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 180 3e-44 UniRef50_A5WFD3 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 180 3e-44 UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 180 3e-44 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 179 4e-44 UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP ... 179 4e-44 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 179 5e-44 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 179 5e-44 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 179 5e-44 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 179 6e-44 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 179 7e-44 UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibac... 179 7e-44 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 178 9e-44 UniRef50_B4D2I0 Two component transcriptional regulator, LuxR fa... 178 1e-43 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 178 1e-43 UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micr... 178 1e-43 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 178 1e-43 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 177 1e-43 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 177 1e-43 UniRef50_UPI0001788591 two component transcriptional regulator, ... 177 2e-43 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 177 2e-43 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 177 2e-43 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 177 2e-43 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 177 2e-43 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 177 2e-43 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_C5SGD8 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 177 3e-43 UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR fa... 177 3e-43 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 176 3e-43 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 176 3e-43 UniRef50_Q027R2 Two component transcriptional regulator, LuxR fa... 176 3e-43 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 176 3e-43 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 176 3e-43 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 176 3e-43 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 176 3e-43 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 176 3e-43 UniRef50_D2R8T9 Two component transcriptional regulator, LuxR fa... 176 4e-43 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 176 4e-43 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 176 5e-43 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 176 5e-43 UniRef50_D2SFS4 Two component transcriptional regulator, LuxR fa... 176 6e-43 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 176 6e-43 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_A7NQF6 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus ce... 175 8e-43 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 175 8e-43 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 175 9e-43 UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=... 175 9e-43 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 174 1e-42 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_Q46SR4 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 174 2e-42 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_B8GUD1 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 174 2e-42 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 174 2e-42 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 173 2e-42 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 173 2e-42 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 173 3e-42 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_C4ZEG3 Two-component response regulator (Extracellular ... 173 3e-42 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 173 3e-42 UniRef50_A6TUG7 Two component transcriptional regulator, LuxR fa... 173 4e-42 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 172 4e-42 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 172 4e-42 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 172 5e-42 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 172 5e-42 UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR fa... 172 5e-42 UniRef50_C1XS11 Response regulator containing a CheY-like receiv... 172 6e-42 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 172 6e-42 UniRef50_B5JUM2 Two component transcriptional regulator, LuxR fa... 172 7e-42 UniRef50_C5SBA1 Two component transcriptional regulator, LuxR fa... 172 8e-42 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 172 9e-42 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 172 9e-42 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 172 9e-42 UniRef50_B4CV47 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 171 1e-41 UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidoba... 171 1e-41 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 171 1e-41 UniRef50_A4JJ97 Two component transcriptional regulator, LuxR fa... 171 2e-41 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 171 2e-41 UniRef50_C0GHS5 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_A1WN26 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_Q0A822 Two component transcriptional regulator, LuxR fa... 170 3e-41 UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator rece... 170 3e-41 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 170 3e-41 Sequences not found previously or not previously below threshold: UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 197 3e-49 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 195 7e-49 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 194 1e-48 UniRef50_C1B8T3 NarL family two-component response regulator n=6... 190 3e-47 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 188 7e-47 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 185 8e-46 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 185 9e-46 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 184 2e-45 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 183 3e-45 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 183 3e-45 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 182 6e-45 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 181 1e-44 UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 181 2e-44 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 181 2e-44 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 179 4e-44 UniRef50_B7A7I0 Two component transcriptional regulator, LuxR fa... 179 4e-44 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 179 6e-44 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 179 6e-44 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 178 1e-43 UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitre... 177 2e-43 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 177 2e-43 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 177 2e-43 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 176 3e-43 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 176 4e-43 UniRef50_D1BCA8 Two component transcriptional regulator, LuxR fa... 176 5e-43 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 176 5e-43 UniRef50_D1C3I4 Two component transcriptional regulator, LuxR fa... 175 7e-43 UniRef50_A5URU4 Two component transcriptional regulator, LuxR fa... 175 8e-43 UniRef50_A9VLR5 Two component transcriptional regulator, LuxR fa... 175 9e-43 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 175 1e-42 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 174 1e-42 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 174 1e-42 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 174 2e-42 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 174 2e-42 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 173 3e-42 UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 173 3e-42 UniRef50_C4RJG1 Two-component system response regulator receiver... 173 3e-42 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 173 3e-42 UniRef50_B9L0W5 Nitrate/nitrite response regulator protein n=1 T... 173 4e-42 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 173 4e-42 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 173 4e-42 UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR fa... 172 4e-42 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 172 5e-42 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 172 5e-42 UniRef50_C4RQT0 LuxR family two-component system transcriptional... 172 6e-42 UniRef50_Q1IT25 Two component transcriptional regulator, LuxR fa... 172 7e-42 UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiob... 172 7e-42 UniRef50_B8FX94 Two component transcriptional regulator, LuxR fa... 172 7e-42 UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillal... 172 7e-42 UniRef50_Q04VJ6 Receiver component of a two-component response r... 172 8e-42 UniRef50_UPI000050F8A6 two component transcriptional regulator, ... 172 8e-42 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 172 8e-42 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 172 8e-42 UniRef50_C5BV53 Two component transcriptional regulator, LuxR fa... 172 9e-42 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 171 1e-41 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 171 1e-41 UniRef50_C4KAM8 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus Rep... 171 1e-41 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 171 1e-41 UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeoba... 171 1e-41 UniRef50_C1A730 NarL family two-component response regulator n=1... 171 1e-41 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 171 2e-41 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 171 2e-41 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 171 2e-41 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 171 2e-41 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 171 2e-41 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 170 2e-41 UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeoba... 170 2e-41 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 170 2e-41 UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythro... 170 2e-41 UniRef50_C7R398 Two component transcriptional regulator, LuxR fa... 170 3e-41 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 23/208 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D R G L + + + E+ ++ + P V+ D + Sbjct: 15 ITLLLVDDHPVVRKGTRELLEGEADLRV-VGEAESGEEAILKARQLMPDVIL--MDVSMP 71 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I + P +V + + D Y+ + +K S D++LG + Sbjct: 72 GMNGIEATRAIKAERPGVGILVLTSYDD---DAYVFALLEAGAAGYLLKNASEDELLGAV 128 Query: 121 LKKETTITSF-----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 ++ P +LS E +LR+ G+ +I+ ++ Sbjct: 129 RAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLD 188 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 I +TV H NI K+ ++ Sbjct: 189 ISPRTVQVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 202 bits (515), Expect = 5e-51, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 35/220 (15%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R G+ L + + + D+ + +P VV D + Sbjct: 38 RIVLIDDHKLFREGIKRILDFEQDFEV-VAEGSDGDEALALVERYKPDVVI--MDINMPH 94 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + +I +P+T I+ + + Y++ +K D ++ + Sbjct: 95 VNGVEATRQLIEAYPDTKVIILSIHDD---ESYVMHALQTGAMGYLLKEMDADALIEAVR 151 Query: 122 KKETTITSFLN-----------------------------MPTLSLSRTESSMLRMWMAG 152 + P L+R E +L++ G Sbjct: 152 VVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADG 211 Query: 153 QGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I+D + I KTV +H NI +K+ +++ V Sbjct: 212 KSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVA 251 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 198 bits (505), Expect = 8e-50, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 28/214 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + + P VV D + Sbjct: 87 IKVLVADDHALFRRGLEMVLRQEPDIQL-VAEASDGAEAVARAAETLPDVVL--LDVRMP 143 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I P+ I+ + L +K S+D++ I Sbjct: 144 KRTGIEACAAIKEVCPSAKIIMLTISDE---EADLYEAIKAGAMGYLLKEISIDEVAAAI 200 Query: 121 LKKETTITSFL----------------------NMPTLSLSRTESSMLRMWMAGQGTIQI 158 + +P L+ E +LR+ G I Sbjct: 201 RAVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDI 260 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + Q+ I TV +H NI K++ H++ Sbjct: 261 AKQLFISENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 65/213 (30%), Gaps = 27/213 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L S + + + + +P V D + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYV-VGEAGNGREAIECFQTLQPDVTL--LDIHMP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + +PNT ++ +E L S +K S + ++ + Sbjct: 67 VCNGLETARKMREANPNTKILMLTVSET---EEMLFEAVKSGASGYVLKSVSPERLIECV 123 Query: 121 LKKETTI---------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 + + L+ E +L+ AG +I+ Sbjct: 124 RQVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIA 183 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I TV +H +I K+ N+ Sbjct: 184 RALFISENTVRNHVRHILDKLHLSNRAQAAAYA 216 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 197 bits (502), Expect = 2e-49, Method: Composition-based stats. Identities = 29/219 (13%), Positives = 66/219 (30%), Gaps = 33/219 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I+D R G+ L + + + D P V+ ++ + Sbjct: 4 INILIVDDHPLFRSGIRWSLEQNPQF-VIVGEAADGSEALRLADELSPDVILVDL--SLP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + + P I+ + DE L S+ K + ++ I Sbjct: 61 GMNGLEVARALKRRQPQAGVIILTMHQD---DEQLFNAIRAGASAYCTKDIEPEQLIDVI 117 Query: 121 LKKETTI---------------------------TSFLNMPTLSLSRTESSMLRMWMAGQ 153 + + L+ E +L G Sbjct: 118 TRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGY 177 Query: 154 GTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I+ +NI +TV +H +I RK+ +++ Sbjct: 178 SNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 68/212 (32%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I D + R GL + K I ++ + P VV D + Sbjct: 11 INVLIADDHALVRQGLKQIIELEPDIKV-IGLAADGEEAVLKTQQLSPDVVL--LDISMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + Q ++ + + I+ + EYL NL + +K + ++ I Sbjct: 68 KQNGIQTLRRLKDMDSTIKIIMLTFHEDR---EYLFETINLGANGYVLKDAESESLIKAI 124 Query: 121 LKKETTITSF--------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + L+R E +L + G +I D Sbjct: 125 RDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNKEIGD 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KTV +H NI +KI +++ Sbjct: 185 CLFISEKTVKNHVSNIFKKINVNDRTQAAIYA 216 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 74/209 (35%), Gaps = 22/209 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L G + + + ++ S P VV ++ + Sbjct: 19 IRVLLVDDHPLLRHGLRALLEQVGGAEV-VGEAGDGEEAIALVLSLNPDVVVMDL--VMP 75 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +I++ P+ +V + D + +K +D + + Sbjct: 76 GVTGIEATRTLIDRRPDLGVLVLTMSED---DASVFAALRAGARGYVLKGADGNDFIAAV 132 Query: 121 LKKETTITSF----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + + P L++ E +L + +G+ +I+ ++ + Sbjct: 133 RAVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFL 192 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 KTV +H +I K++ ++ R Sbjct: 193 SQKTVKNHLTSIFAKLQVADRTQAVVRAR 221 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 195 bits (497), Expect = 7e-49, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 25/213 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL G L + GV + + E+ +P VV ++ + Sbjct: 10 IRVLITDDHPVFRQGLRGLLEALGV--EVVGEAESGPQAVQLAAELQPDVVVMDL--HMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I P +V + D+ + +K ++I + Sbjct: 66 GGNGIEATRTITRTSPRIGVLVLTMFRD---DDSVFAAMRAGARGYLLKESGAEEIARAV 122 Query: 121 LKKETTI------------TSFLNMPTLS------LSRTESSMLRMWMAGQGTIQISDQM 162 T F +MP L+ E +L++ G+ +I+ + Sbjct: 123 RAVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTL 182 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLT 195 + KTV +H NI K+ ++ + R Sbjct: 183 FLSPKTVRNHVSNIFMKLHVADRAQAIVLAREA 215 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 71/203 (34%), Gaps = 17/203 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D G+ L S G + + + + + ++ P V+ ++ + Sbjct: 24 IRVLIVDDHPMVAEGIQSILESYGDIEV-VGAVSSGREAIARAEALVPDVILMDL--NMP 80 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D ++I + P ++ + EY+ + +K ++I I Sbjct: 81 DVGGLSATEIIQERCPEIRVLILSMHDSP---EYITTALSHGAVGYVLKDVQPEEIKTAI 137 Query: 121 LKKETTITSFLNMPTLSLSR-----------TESSMLRMWMAGQGTIQISDQMNIKAKTV 169 SLS E ++L G+ +++ ++I +TV Sbjct: 138 DAVMRGEQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 170 SSHKGNIKRKIKTHNKQVIYHVV 192 +H+ NIKRK+ + + Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYA 220 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 194 bits (495), Expect = 1e-48, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I D S R G+ L + + + T + +P V+ D + Sbjct: 7 ITILIADDHSLVREGIRKILELEPDLQV-VGEAATGQEAIEMTRRYQPQVII--MDINMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + K+I + P + + +EY++ +S +K S ++++ + Sbjct: 64 GLNGIEATKVIRQEWPQIAILALTIHDD---EEYIIELLRSGVSGYVLKDISAEELVQAV 120 Query: 121 LKKETTIT-------------------SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + ++ L+ E +L G+ +I+ + Sbjct: 121 YQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNREIARE 180 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KTV +H +I KI ++ Sbjct: 181 LFISEKTVKNHLTHIFHKIGVSDRTQAALYA 211 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 194 bits (494), Expect = 1e-48, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 76/207 (36%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R GL +L +R + + + E +D ++RP VV ++ + Sbjct: 15 IKLLLVEDHHIVRRGLVFFLKTREEFEI-VGEAENGEDALTFVRTERPDVVLMDL--SMP 71 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I ++ + + +Y+L +K + ++ I Sbjct: 72 KMDGIEATKQIKQYDETIKILILSSFSE---QDYVLPALEAGADGYQLKEVQPEQLVASI 128 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + +F P L++ E +L+ G+ +I+ +++I Sbjct: 129 IAIYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHIT 188 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +TV +H NI K++ ++ Sbjct: 189 EQTVKTHVSNILAKLEVDDRTQAALYA 215 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 72/213 (33%), Gaps = 27/213 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ + + R GL L S + + + E + + P VV D + Sbjct: 4 IKVLVAEDHTIVRKGLCSLLYSEPDIEV-VGEAENGREAIKMVEELAPDVVL--MDISMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + ++P+ ++ + +EY+ S IK + D++ I Sbjct: 61 ELNGMDATRQLKKKYPDVKILILSMHST---EEYIFETLRAGASGYLIKRSAPTDLIKAI 117 Query: 121 LKKETTITSFLNMPT---------------------LSLSRTESSMLRMWMAGQGTIQIS 159 + LS E +L++ G +I+ Sbjct: 118 HAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREIA 177 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KTV +H+ +I++K+ + + Sbjct: 178 GHLYISPKTVEAHRNHIQKKLGLNGTAELTKYA 210 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 28/215 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D S R GL L + + D E +P VV D + Sbjct: 9 IRLLIVDDQSLIRQGLKAMLEQEPDLEV-VGDAENGKVALELVAELQPDVVL--MDIRMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + KLI+ PN +V + D YL +K ++ I Sbjct: 66 EMDGRTATKLIMQSFPNIKVLVLSTFDD---DSYLTGAMRAGAKGYLLKDMPSSELADAI 122 Query: 121 LKKETTITSF----------------------LNMPTLSLSRTESSMLRMWMAGQGTIQI 158 + T F + ++ E +L + G +I Sbjct: 123 RFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGVGATNREI 182 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 + Q+ I TV +H +I ++ N+ + Sbjct: 183 AQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYAN 217 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 63/197 (31%), Gaps = 15/197 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + P VV ++ + Sbjct: 7 IRILVVDDHHVVRSGLAASLGLEDDLNV-VGEAGNAGEAVTQFRKHHPDVVLMDL--RLP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A+ + + + P+ ++F +E + +K + +++L I Sbjct: 64 GANGTAATADLRREWPDARVLMFTTFDG---EEDIYRAMQAGARGYLLKSAAREELLSAI 120 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L S E +L++ G+ +I+ + I +TV Sbjct: 121 RAVAAGERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISEETVKR 180 Query: 172 HKGNIKRKIKTHNKQVI 188 H N+ K+ ++ Sbjct: 181 HASNLFVKMGVADRAQA 197 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 191 bits (487), Expect = 9e-48, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 71/210 (33%), Gaps = 26/210 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I++D R G L + + + + + C RP VV ++ + Sbjct: 11 VRLIVVDDHDLIRAGFRLVLEQEPDFEV-VGEASSGREAIELCRRLRPDVVVMDL--AMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I +HP +V A+ + EY+L + +K L ++ + Sbjct: 68 GVDGLEATRRIKEEHPQVAVLVVTALEDP---EYMLEALKAGAAGYVLKSSPLPRVISAL 124 Query: 121 LKKETTITSFLNM--------------------PTLSLSRTESSMLRMWMAGQGTIQISD 160 + + + P L+ E +L + G+ +I+ Sbjct: 125 RRLLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAR 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 ++ I T SH NI RK+ ++ Sbjct: 185 ELVISRGTAKSHVQNIIRKLGVSDRTQAVA 214 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 30/203 (14%), Positives = 66/203 (32%), Gaps = 17/203 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL +L + + + D+ + P VV D + Sbjct: 5 IRVLVADDHPIVRQGLKTFLDIQPDLSV-VAEARDGDEALALIAAHEPDVVL--LDLNMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + + IV ++ + + K D + I Sbjct: 62 GSDGAKVLTRLAASDHRAKVIVLTSVTEAV---RVTEAVAAGAAGFLYKDIDPDSLAQAI 118 Query: 121 LKKETTITSFLNM-----------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 F P +L+ E +L + AG+ +I+ Q+++ KTV Sbjct: 119 RSVADGQVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKTV 178 Query: 170 SSHKGNIKRKIKTHNKQVIYHVV 192 +H ++ RK+ ++ Sbjct: 179 KTHLSSLFRKLGVADRTQAALYA 201 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 191 bits (486), Expect = 1e-47, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 60/204 (29%), Gaps = 19/204 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D R G+ L K + + + P +V D + Sbjct: 5 KVLVADDHDLVREGICKLLELYEDIKV-VGEAGDGLETVKGVRDHFPDLVL--LDLNMPR 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 IK I P ++ +EY+ K +++ I Sbjct: 62 MGGITAIKKIKEISPGIKVLILTIHDE---EEYVYEVIRSGAEGYIQKDVKPEELKRAID 118 Query: 122 KKETTITSFLNM-------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 K F LS E +L + G QI+ ++ I KT Sbjct: 119 KVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFISEKT 178 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVV 192 V +H NI RK+ +++ V Sbjct: 179 VKNHVSNILRKLSVNDRTQAVIVA 202 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 191 bits (485), Expect = 2e-47, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 17/200 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G L + D + +D + P VV D + Sbjct: 6 IAVLVVDDHTLHRDGTRRILEQYDDVDV-VGDAASGEDALAMVNRLHPRVVL--MDIRLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I +HP+T ++ A + +EY+ ++ + K +++ + Sbjct: 63 GMNGIEATRRIRERHPDTRVLIVTAYDD---EEYVRGAFDVGAAGYLSKTAPGRELVEAV 119 Query: 121 LKKETTIT-----------SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + + + P +L+ E ++LR+ G QI+ ++ I A+TV Sbjct: 120 RAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISARTV 179 Query: 170 SSHKGNIKRKIKTHNKQVIY 189 H I K+ ++ Sbjct: 180 ERHCDRIYGKLGVTSRTEAV 199 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 70/209 (33%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D ++ R + L + + + D + ++ RP + D + Sbjct: 5 IKILVVDDHAFLRDAIRSILEDESDMNV-VGEASSGDGVLEKVEACRPDCIL--MDINLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +L+ +PN +VF + DEYL+ +K S + ++ I Sbjct: 62 GKNGIEATELVKKNYPNCRVLVFTMYEH---DEYLMDALQAGADGYLLKDSSSEQVVAAI 118 Query: 121 LKKETT-----------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + L+ E +L + G +I++ + Sbjct: 119 RMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEALY 178 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I KTV H I +K+ ++ Sbjct: 179 ISDKTVKIHINKIFKKLNVKSRSQAVIYA 207 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 190 bits (484), Expect = 2e-47, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L ++ + + D +P VV ++ + Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTV-VGEAGDGDQAVQQYRDLKPDVVLMDL--AMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q I+ I PN +V A DE +L S +K +DI + Sbjct: 59 GTDGVQAIQEIKRIDPNARVVVLTAYDT---DERILQAVQAGASGYLLKGAPREDIFRAV 115 Query: 121 LKKETTITSFL-----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + L+ E +L + G +I+ +++ Sbjct: 116 RVVYRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELS 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I +TV H I RK+ + Sbjct: 176 ITERTVKFHANAIYRKLDVSGRTEAVSKA 204 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + D + Q+P VV D + Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDF-EPVGDAADGQQAVNLIEQQQPDVVL--LDLRLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + ++ PNT F+V DEY+ N + +K S +++ I Sbjct: 59 QLSGIEVMRHTRASAPNTRFLVLTTYDT---DEYIGPALNAGAAGYLLKDASPEEVFRAI 115 Query: 121 LKKETT-------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 LS+ E +L++ + G+ I+ +NI Sbjct: 116 RSIYEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISEN 175 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 T+ SH +I K+ ++ V Sbjct: 176 TIKSHVSHIFSKLDVRSRAEAVAVA 200 >UniRef50_C1B8T3 NarL family two-component response regulator n=61 Tax=Bacteria RepID=C1B8T3_RHOOB Length = 276 Score = 190 bits (483), Expect = 3e-47, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 64/197 (32%), Gaps = 16/197 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + T D C + +V ++ Sbjct: 2 IRLLLADDHAIVRAGLRALLEHEDDIEV-VGEAATADAAVALCATTPVDLVLMDLRFG-P 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + + +V N D +L + +K ++L + Sbjct: 60 GTSGVDATRNLRSLPNPPHVLVVT---NYDTDADILDAVAAGAAGYLLKDTPPPELLAAV 116 Query: 121 LKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + P SLS E +L + AG+ +I ++ + TV Sbjct: 117 RAASAGDSVLSPAVASKLMTRVRRPATSLSPREIQVLTLVAAGRSNREIGKELFLSETTV 176 Query: 170 SSHKGNIKRKIKTHNKQ 186 SH +I K+ ++ Sbjct: 177 KSHLVHIFGKLGVKSRT 193 >UniRef50_B1ZY58 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZY58_OPITP Length = 223 Score = 189 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 68/195 (34%), Gaps = 15/195 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+GL + S+ + + ++ D +P VV ++ + Sbjct: 20 IRVLVVDDHPPMRVGLVALIRSQPGMDV-VAEASDGEEAIEIYDDLQPDVVLMDL--RMP 76 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I I + P IV +DE + S +K +++I + Sbjct: 77 GMGGVEAILAIRKKAPEARVIVLSTYD---WDEDIHRALQSGAKSYLLKDMPIEEIASTV 133 Query: 121 LKKETTITSFLN---------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 TS L+ E +L + G+ +I+ + I TV S Sbjct: 134 RAVYAGDTSLPRSVAERLTERAQREQLTERERDVLESLIKGRSNKEIASSLCISEDTVKS 193 Query: 172 HKGNIKRKIKTHNKQ 186 H + K++ ++ Sbjct: 194 HLKTLFAKLRVRDRT 208 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 189 bits (482), Expect = 4e-47, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 65/198 (32%), Gaps = 15/198 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + I + + +P + ++ + Sbjct: 10 IRILVVDDHHIVRQGLVALLNTLPGFEV-IAEAGDGVEAIALHREHQPDITIMDL--RLP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I I + P +V DE + +K DD+ I Sbjct: 67 RMNGVEAITRIREESPGARIVVLTTFDG---DEDIYRALQAGARGYLLKGMDADDLTAAI 123 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + M L+ E +LR+ + G+ +I+ ++I TV + Sbjct: 124 RSVHAGKSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEATVKT 183 Query: 172 HKGNIKRKIKTHNKQVIY 189 H N+ K+ ++ Sbjct: 184 HINNLLSKLGVSDRTQAA 201 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 77/212 (36%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD----SQRPSVVFINED 56 + +I+D R+GL YL+ + I + + + +P ++ ++ Sbjct: 13 IKVMIVDDHDMVRMGLKTYLMQDPGFEV-IAEAGDGREAVELLERGLREGQPDIILMDL- 70 Query: 57 CFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDI 116 + + ++ K + ++ P+ ++ + D+ ++ S +K S +++ Sbjct: 71 -MMPGMNGAEATKEVRSRFPDMKIVILTSFLE---DDLVVQAVEAGAVSYVLKTVSAEEL 126 Query: 117 LGDILKKETT----------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + + + ++ E +L + G+ I++ Sbjct: 127 IYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNKDIAE 186 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++I KTV +H N+ K + ++ + Sbjct: 187 ELHISIKTVKTHVSNLLMKCELEDRTQLAIYA 218 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 189 bits (480), Expect = 7e-47, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R GL + ++ + + + T + + +P +V ++ + Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEV-VGEAATGLEALRVIEETKPDLVLMDL--SMP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD- 119 + Q IK I Q P+T IV + ++ E+++ + +K ++++ Sbjct: 58 EMDGIQAIKKAIQQFPDTNIIVLTSYSD---QEHVIPALQAGAKAYQLKDTEPEELVKTR 114 Query: 120 ----------------ILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 +L L+R E +L G+ +I+ + Sbjct: 115 QVHGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALF 174 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I KTV +H N+ K++ ++ Sbjct: 175 ISEKTVKTHVSNLLAKLEVADRTQAALFA 203 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 188 bits (479), Expect = 7e-47, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + + + RP V D + Sbjct: 7 IRLLLVDDHFVVRSGLAMLLAQQDDFAV-VAEADDAEQAVAHYRQHRPDVTL--MDVRMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 AS + ++ I + P+ I+ DE + +K ++ + Sbjct: 64 GASGIEALQRIRGEFPDARVIMLTTYD---LDEDVFRALEAGAVGYLLKSVRHAELFAAV 120 Query: 121 LKKETTITSFLN---------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 K LS E L + G +I + + +T + Sbjct: 121 RKVHAGERCVPQSLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTERTAKA 180 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H I K++ ++ Sbjct: 181 HVQAILVKLEAADRAEAVDAA 201 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 188 bits (479), Expect = 9e-47, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 75/210 (35%), Gaps = 24/210 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL + + + + + D +P VV D + Sbjct: 28 IRVLIVDDHDLFREGLRQLIETDPAIEV-VGEAANGQDALKMVAELQPDVVL--MDINMP 84 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I+ Q+ + ++ + +EY+L S +K +++L I Sbjct: 85 GMDGIRATEAIVQQYRHVHVLMLTMYDD---EEYVLHAIRAGARSYLVKNSKPEELLRAI 141 Query: 121 -LKKETTITSFLNMPTLS-----------------LSRTESSMLRMWMAGQGTIQISDQM 162 + E T ++ + LS E +MLR+ G QI+D + Sbjct: 142 HVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADAL 201 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 N+ TV ++ + +K+ ++ Sbjct: 202 NLAESTVKNNLSALFQKLGVRDRTQAVIYA 231 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 187 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 16/205 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL +L + + + + ++ + RP V+ D + Sbjct: 8 VRVLLVDDHQVVRRGLRTFLEVQEDIEV-VGEASDGEEGIARAEELRPDVIL--MDIKMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + ++ + L K I P++L + + Sbjct: 65 GTDGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAAGYVYKDIDPDALAGAIRSV 124 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + + +L+ E +L G+ +I+ + + K Sbjct: 125 HAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVLSEK 184 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H NI K+ ++ Sbjct: 185 TVKTHVSNILMKLDVADRTQAALWA 209 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 187 bits (477), Expect = 1e-46, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 28/215 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R G + L + + + + RP V+ ++ Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEV-VATAADGVEAYQKVLEHRPDVLILDLSMP-P 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S I P+T ++ + +EYL +K + ++ + Sbjct: 59 GESGLIATSKISESFPDTKILILTMFDD---EEYLFHVLKSGAKGYILKNSPDEQLILAV 115 Query: 121 LKKETTITS-----------------------FLNMPTLSLSRTESSMLRMWMAGQGTIQ 157 T + P LS+ E +L + G G Sbjct: 116 RTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKD 175 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I++++ + KTV +HK +I K+ +K + Sbjct: 176 IAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 21/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R G+ L + + + + RP V+ D + Sbjct: 5 IRVLLADDHALVRDGIRARLNKVPEIEV-VGEATNGREAVKLAHELRPDVLL--MDVSMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + P ++ N EY+ +K S +++ I Sbjct: 62 VMNGLEAAAEVRKSFPEIAVLILSIYDN---SEYVRGVVQAGARGYILKDISAPEMITAI 118 Query: 121 LKKETTITSFLN---------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + F + L+ E +L G +++ + I Sbjct: 119 SSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLGIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +TV SH+ N++ K+ N +Y V + Sbjct: 179 VRTVESHRLNLREKVGNKNAAQLYKVAQ 206 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 187 bits (477), Expect = 2e-46, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 62/208 (29%), Gaps = 24/208 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL G + + + P VV ++ + Sbjct: 12 LRLLIVDDHPIVRDGLRGVFDGE-DGFEVVGEASDGAQALVRAAESGPDVVLMDL--RMP 68 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + + P +V + +L + +K +D++ + Sbjct: 69 TMGGVEAIRRLRVEQPAVRVLVLTTYDT---ESDVLPAIEAGATGYLLKDAPREDLIRAV 125 Query: 121 LKKETTIT------------------SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + P +L+ E +LR+ +G + + ++ Sbjct: 126 RAAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKL 185 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 I TV +H + K ++ Sbjct: 186 FISEATVKTHLLHAYAKFGVRDRAAAVA 213 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 187 bits (475), Expect = 2e-46, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 66/223 (29%), Gaps = 24/223 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL + + + + + +P V+ D + Sbjct: 8 IRVLLVDDEDIVRYGLKAIAQGTPEIEI-VGEAGSGKAAIAQAKTLQPDVIL--MDINMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I P+ ++ EYL+ +K +D + I Sbjct: 65 QMDGVTATQEISRIQPHAKVLILTTHDE---AEYLVEAMQQGAVGYLLKNTPPEDFIQSI 121 Query: 121 LKKETTITSFLNMPTLSL------------------SRTESSMLRMWMAGQGTIQISDQM 162 + L + E +L++ G +IS+ + Sbjct: 122 QQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNREISETL 181 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVN 205 +I KTV +H +I ++ ++ + T+ V Sbjct: 182 HITEKTVKNHVSSILSRVGVQSRTQLAIWANSAGEETSSFAVA 224 >UniRef50_Q024A4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q024A4_SOLUE Length = 225 Score = 187 bits (475), Expect = 3e-46, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D LGL G + + + +T + P V+ ++ + Sbjct: 23 IRVLIADDHPVVCLGLLGIINGQPDMTV-VGQAKTGTEAVALARKHSPDVILMDL--RMP 79 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + ++I + P + IV DE + S +K S +L I Sbjct: 80 GMSGVEATEVIRAERPESAVIVLTTYQG---DEDIRKALAAGAQSYLLKGMSHLKLLEAI 136 Query: 121 LKKETTITSFLNM---------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 T T F +LS E +LR+ + G +I+D +NI TV Sbjct: 137 RSVRTGHTYFPRAIRNSVPGKLNRAALSPREMDILRLIVRGLSNQEIADALNITRGTVKW 196 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H I R++ +++ V Sbjct: 197 HVNIILRRLDVNDRTQAVVVA 217 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 186 bits (474), Expect = 3e-46, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D G L + + + +P VV D + Sbjct: 9 IRVVMVDDHQVVLDGFIARLEQEPEIEV-VATASNGLEALELVKLHQPDVVL--MDVSMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +LI + P+T ++ N EY++ +K S ++ I Sbjct: 66 IMNGIEATRLIKEEVPHTKVLMLTMHDNR---EYIMQVMQAGAMGYMLKEISALKMVQAI 122 Query: 121 LKKETTITSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 T F LSR E ++LRM G + +I+ +NI Sbjct: 123 KTVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNIS 182 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +TV +H+ NIK K+ H+ + Sbjct: 183 YRTVETHRQNIKHKLDIHSTAELAQYA 209 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 186 bits (473), Expect = 4e-46, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 73/212 (34%), Gaps = 27/212 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D + R G+ L + + + D RP VV D + Sbjct: 5 KILLTDDHTLFRQGVRTLLAAEADMEVA-GEAANAMDAVALAQQLRPDVVL--MDIGMAG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S+ + +LI + P I + ++YL ++ + +K D ++ I Sbjct: 62 MSSFEATRLIRKERPEVKVIFLSMYDD---EDYLAECVDMGANGYILKDSPADQLITAIR 118 Query: 122 KKETTITSFLNMPTLSL---------------------SRTESSMLRMWMAGQGTIQISD 160 + + + L ++ E +L+M G+ +I+ Sbjct: 119 EVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKEIAA 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV +HK N+ RK+ HNK + Sbjct: 179 FFELSVKTVEAHKFNLMRKLDIHNKAQLVQYA 210 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 186 bits (473), Expect = 5e-46, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 62/212 (29%), Gaps = 25/212 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDS---QRPSVVFINEDCF 58 ++ D + R G+ L + + + V D Sbjct: 29 RILLADDHALVRRGVRLILDGEPDLWV-VGEAGDGAEAIEQVRRRAGTPQEVDLAVLDVA 87 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + + Q + + +P ++ N ++YL + +K + D++ Sbjct: 88 MPRMTGLQAARELSRMYPRLRILILTMHDN---EQYLFEALKAGAAGYVLKSLADRDLVQ 144 Query: 119 DILKKETTITSF------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 P L+ E +L++ G + +I+D Sbjct: 145 ACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KTV H+ NI K+ ++ + Sbjct: 205 TLFISVKTVERHRANILAKLGMKDRLELTRYA 236 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 22/210 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R G+ + + + + + +P +V D + D Sbjct: 5 RVLIVDDHPLFREGVKSLVERSA-NYQAVGEAGCGAEALALAQELKPDLV--TMDVSLPD 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESL-------- 113 S + ++ I++ P T ++ + K L Sbjct: 62 MSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQGFDALC 121 Query: 114 -----------DDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 D++ + + + + L+ E +LR+ G T QI+ + Sbjct: 122 RGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQIAAAI 181 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV +H+ N+ +K+ H+K + Sbjct: 182 ELSPKTVENHRTNLMKKLDVHSKMELVKYA 211 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 185 bits (471), Expect = 7e-46, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 65/209 (31%), Gaps = 27/209 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D R G+ L + I + + +P +V D + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNTD--LEVIGEASNGQEALELVPKLKPDLVL--MDINMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +P+ ++ D+ L +K ++++ + Sbjct: 57 VLDGVEATRKLKQMYPDLKVVILTVSE---IDKDLFEAIKAGADGYLLKNLGPEELVSSL 113 Query: 121 LKKETTITSFLNM--------------------PTLSLSRTESSMLRMWMAGQGTIQISD 160 + ++ P LS E +LR+ G +I+ Sbjct: 114 RAAISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAA 173 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 ++ + TV +H +I K+ N+ Sbjct: 174 KLYVAESTVKNHMRHILEKLHLRNRSEAV 202 >UniRef50_B4D831 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4D831_9BACT Length = 209 Score = 185 bits (471), Expect = 8e-46, Method: Composition-based stats. Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + RLGL + + + +P VV D + Sbjct: 5 IRVLIVDDHAMMRLGLVEAIAGERDLTL-VGEAANGTQCLEQYRKHQPDVV--TMDFRLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A ++ + + P+ +V +E + K ++++L I Sbjct: 62 GADGAESTAHLRTEFPDARVVVLSVFEG---EEDIWRAVEAGAMGYVSKSAEVEEVLEAI 118 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 T F +L+ E +L +AG +I+ +++ TV Sbjct: 119 RCVVGGETYFPAPIASKLASRRTRDALTPREHQVLHHIVAGLSNKEIAAALHMSEATVKL 178 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H N K+ ++ V Sbjct: 179 HISNTLAKLHVADRTQAAIVA 199 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 185 bits (470), Expect = 8e-46, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 69/212 (32%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I D + R G + S+ + + + + P V+ D + Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRV-VGEAADGKEAYDLVARVEPHVLL--LDISMP 58 Query: 61 -DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + + I P+T I+ + Y L + +K S + +LG Sbjct: 59 PGENGLIACERISCDFPSTRIIILTMFEETDYLFYTLRG---GAAGYVLKNSSTEVLLGA 115 Query: 120 ILKKETTITSFL-------------------NMPTLSLSRTESSMLRMWMAGQGTIQISD 160 I K T T P LS E + + G + +D Sbjct: 116 IRKVATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAAD 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I KTV +H+ I K+ +++ + H+ Sbjct: 176 KLFISVKTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 185 bits (470), Expect = 9e-46, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 18/204 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL+ L +R + + + +++ RP VV D + Sbjct: 4 IRILVADDHPMLREGLSAVLGTRPGFEV-VGEAGDGEEVLRLASGLRPDVVL--LDLEMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + +VF A + E LL +K S +I + Sbjct: 61 GTGGVEVLRRLRGLDDPPKVVVFTAYDD----ERLLEALREGARGCLLKGASRTEIFDAV 116 Query: 121 LKKETTITSFLNM-----------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + + L+ E +LR+ G +++ + I +TV Sbjct: 117 RTVHAGGSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISERTV 176 Query: 170 SSHKGNIKRKIKTHNKQVIYHVVR 193 H ++ K++ N+ + R Sbjct: 177 KFHVSSLLAKLRAENRTQAVAIAR 200 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 28/209 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R G++ L + + I + + ++ + P +V D + Sbjct: 4 IRVLIADDHPLFRQGVSSVLANTPDNEV-IAEAGSGEEAVQMACNLLPDLVL--MDIQMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + I+++ + I+ + D + +K +DIL + Sbjct: 61 DLNGIEATRKILSKCRDIYIIIITMFED---DTSVFSAMQAGARGYVLKDAEKEDILRAV 117 Query: 121 LKKETTITSFLNMPTLS----------------------LSRTESSMLRMWMAGQGTIQI 158 F + L+ ES +L + G ++ Sbjct: 118 RAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNSEV 177 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQV 187 ++ + + KTV ++ NI K++ ++Q Sbjct: 178 AETLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 31/217 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ L + + + D A +P VV D + Sbjct: 4 INILLVDDHTIVRDGIKATLKDQKNFHI-VGEAANGLDGIEAVKQLKPDVVI--MDITMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + S + +I ++P++ ++ N + Y+L +K D+ + I Sbjct: 61 EMSGIEAADVISKKYPDSKVLILSMHDN---ETYILKSVEAGAYGYLLKDVDKDEFIKAI 117 Query: 121 LKKETTITSFLNMPTL-------------------------SLSRTESSMLRMWMAGQGT 155 F + L++ E +L+M G+ Sbjct: 118 TAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGKNN 177 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I+D + I +T+ +H+ NI +K+K N + + Sbjct: 178 REIADGLGISIRTIETHRANIMKKLKVKNAVELVRIA 214 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 75/207 (36%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L I + ++ + P V+ ++ + Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQN-DGVEVIAEADSGEQAYQFYGEHMPDVIVMDM--SMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ II ++P I+F N + + K + DD++ + Sbjct: 62 GMGGLEALRRIIARYPQARVIIFSMHEN---AAFASQALGAGARAYVAKSGAADDLVQAV 118 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + PT LS E + R+ AG+G +IS + I Sbjct: 119 REVAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV++++ +K+K+ + + + Sbjct: 179 QKTVANYQTLLKQKLGITSPIELVRLA 205 >UniRef50_D1CI66 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1CI66_THET1 Length = 218 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 69/211 (32%), Gaps = 26/211 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R L L +RGV + + ET + RP VV ++ + Sbjct: 1 MRVLIADDHALFRDSLRTLLEARGV--EVVGEAETGKEAVELARELRPDVVLMDL--KMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDD----- 115 ++I + P +V A + DE L K D Sbjct: 57 GMDGLAATRMISAEMPEVKVVVLTASED---DEDLFEAVKSGALGYMFKDVRSDQFFELL 113 Query: 116 -------------ILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQ-GTIQISDQ 161 + +L++ + L+ E +L + + G +++++ Sbjct: 114 EAASRGEPAFTPGLARKLLREMSKPAGRAEREPEVLTEREQEILELLVQGVTSNKELAER 173 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + + TV H NI K+ N+ + Sbjct: 174 LILSENTVKYHLRNILDKLHLQNRTQVVAYA 204 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 184 bits (469), Expect = 1e-45, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 72/218 (33%), Gaps = 23/218 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDS----QRPSVVFINEDC 57 +++D + R G+ +L + + + + + + +RP +V D Sbjct: 20 RVLLIDDHALVRDGMRMHLTLQPDLYV-VGEADGGEAALAWLERAGARERPDLVIT--DI 76 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + Q+P +V N+ EY +K D+++ Sbjct: 77 GMRGMGGIALTAALHEQYPEIAVLVVSMHDNL---EYARQAVRAGARGYVLKDAPADELM 133 Query: 118 GDILKKETTITSFLNM-------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 I + P +L+R E +L G +I+ Q+ + Sbjct: 134 AAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEIATQLGV 193 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGI 202 +TV +H+ N+KRK+ + + T G Sbjct: 194 SVRTVETHRLNLKRKLGIEGRAGLVKYAVEQAGETEGG 231 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 184 bits (468), Expect = 1e-45, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 70/209 (33%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R GL L ++ + + + RP VV D + Sbjct: 4 IKVLIVDDHTLMRSGLRLMLSAQEDIEV-VGEAADGSGGIAMAQKMRPDVVL--LDISMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + S + +K ++ P+ I+ + Y+ L +K + D + + Sbjct: 61 EMSGLECLKTLLANQPDLRVILLTMHED---ARYVKEGFALGAMGYVLKKAADDVLYQAV 117 Query: 121 LKKETTITSF-----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + + LS E +L + AG +I++Q+ Sbjct: 118 RAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLV 177 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I KTV ++K I K+ + + Sbjct: 178 ISVKTVETYKYRIMEKLNCKKRSDLVKFA 206 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 30/213 (14%), Positives = 67/213 (31%), Gaps = 30/213 (14%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 ++ D + R G+ L + + + D+ + P VV ++ + Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEV-VGAAKDGDEAVALVAEKAPDVVLMDL--RMPRCD 58 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + + I +HP T +V A+ D+ L K ++I+ I Sbjct: 59 GVEATRRIRKEHPRTQVVVLTTFAD---DDSLFTALQAGARGYLTKDARGEEIVQAIDAV 115 Query: 124 ETTIT------------------------SFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 + + + L+ E+ +L + G +I+ Sbjct: 116 MSGEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIA 175 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++ A TV +H N+ K ++ Sbjct: 176 RALHVSAATVKTHINNLFAKTGARDRTQAVRYA 208 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 67/212 (31%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D + R GL L + + + + ++ P VV ++ D + Sbjct: 4 ISLLLVDDHALFREGLASLLSYQPDFTV-VGEAASGEEAVERARELVPDVVLMDID--LP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I Q P ++ + E L IK ++L + Sbjct: 61 GIDGIEATRRIKRQLPEVRVVMLTVYDDH---ERLFQSIKAGAQGYLIKNIRSAELLDQL 117 Query: 121 LKKETTITSFLN--------------------MPTLSLSRTESSMLRMWMAGQGTIQISD 160 + P LS E +L + +I+ Sbjct: 118 RGLARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIAA 177 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++I TV +H NI K++ +++ Sbjct: 178 RLSISEHTVKNHLKNILAKLQLSSRRQAAAYA 209 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 184 bits (468), Expect = 2e-45, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 75/212 (35%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S ++ D R GL L + + + + + +S +P V+ + + Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEV-VGEASDGIEAVNLVESLQPGVLVTDL--MMG 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + ++ + P T ++ N + Y+ + +K + ++++ + Sbjct: 59 GMSGIEVTYQVVKRSPKTAVVILSMYGN---EAYVHEALRAGARAYVLKDSTSEELVRSV 115 Query: 121 LKKETTITSFLN--------------------MPTLSLSRTESSMLRMWMAGQGTIQISD 160 + + P +L+ E +L + G +I++ Sbjct: 116 REAVQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAE 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I +TV H+ N+ RK+ N+ + Sbjct: 176 RLFISPRTVEVHRANMMRKLDLRNQTQLLRYA 207 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 38/200 (19%), Positives = 77/200 (38%), Gaps = 11/200 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G L ++ + ++ + AC +R VV D + Sbjct: 10 LTLLLVDDHAVVRAGYRRLLEQASR-CWQVTEADSGESAYRACARERFDVVV--MDISLP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + + + P ++F F E L +KS PE L + + I Sbjct: 67 GISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQALSGGAAGYITKSSAPEVLVEAVQRI 126 Query: 121 LKKETTITSFLNMPT--------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + + SLS E + R+ G G+ +I+ +NI KTV+++ Sbjct: 127 AAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVANY 186 Query: 173 KGNIKRKIKTHNKQVIYHVV 192 I+ K+ +N + + Sbjct: 187 GSGIREKLALNNVAEMTRLA 206 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 24/210 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + RP V I D + Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTV-VAEASNGLEAVEKALETRPQVAVI--DISMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +K I ++ P +V EY++ S +K + ++++ + Sbjct: 59 ELNGMEVVKRIHDKLPECKILVLTMHEE---QEYVIHMVRAGASGYLLKDSASEELIDAV 115 Query: 121 LKKETTITSFLN------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 T T + P +L++ E + + + G+ T I+ + Sbjct: 116 KALATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTL 175 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I KT +H+G + K+ N + Sbjct: 176 DISVKTAENHRGKVLDKLGVSNTAELVRYA 205 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 78/207 (37%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL L + + E+ + P V+ ++ + Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISV-VGEAESGEQAYQTYPEISPDVLVMDM--SMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ I+N+ I+F N Y + K +D++ + Sbjct: 62 GMGGLEAVRRILNRWSGAKVIMFSMHEN---ATYAIQSLTAGAMGYVAKSGHAEDLVKAV 118 Query: 121 LKKETTITSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + ++ + + PT L+ E + R+ G+ I+ ++NI Sbjct: 119 REVKSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIG 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV++++ ++K+K+ H+ + + Sbjct: 179 QKTVANYQTSLKQKLGIHSPVDLVRLA 205 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 76/208 (36%), Gaps = 26/208 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D + R G++ L + + + + +P VV D + Sbjct: 5 KVLIADDHAVLREGMSRLLSQEKDIEV-VGEAGDGQEAVDMVAQFKPDVVL--MDIVMPR 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + KLI +P+T ++ A +++ Y+L S +K D+I+G I Sbjct: 62 LTGVEATKLIKKNNPSTCILILTAYSDI---RYILGLLEAGASGYLLKSAKSDEIVGAIR 118 Query: 122 KKETTIT--------------------SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + + S + LS E +L++ G +I+D+ Sbjct: 119 AIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREIADK 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 + + +TV +H NI K++ + Sbjct: 179 LTLSMRTVKAHLSNIFNKMRCSCRTEAI 206 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 80/222 (36%), Gaps = 27/222 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R GL + + + E S++P +V D + D Sbjct: 14 KILLVDDHPMMREGLRQIIGNEIDLAV-CGEAENAFQALELVKSEKPDLVLA--DITLPD 70 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + +K + QHP +V + E +L +K E I+ I Sbjct: 71 KNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRA---GGRGYIMKHEGGKKIMQAIR 127 Query: 122 KKETTI-------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + T + P +L+ E + R+ G T +I+ M Sbjct: 128 HVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKEIAANM 187 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY-HVVRLTDN-VTNGI 202 ++ AKTV H+ NIK K+ + + VR ++ T+G+ Sbjct: 188 HVSAKTVEVHRMNIKTKLGLKTAAELIRYTVRWVESQSTSGL 229 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M I D R GL L + + + ++ C V D + Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVA-GEASSGHEVIDQCGRFAWDVAV--LDYRMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 IK + + P+ +V D+Y + + K + +D++ I Sbjct: 60 GKGGIDLIKELRQRFPDRPVLVLSVCPE---DQYAMRVLRAGAAGYLTKESAPEDLVNAI 116 Query: 121 LKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K LS E ++ + +G+ +I+ Q+ + Sbjct: 117 RKVARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFL 176 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 T+S+++ I K+ + + Sbjct: 177 SPNTISTYRKRILEKLDLKSNAELMRYA 204 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 71/221 (32%), Gaps = 38/221 (17%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R G+ L + + D E ++ + P V+ D + Sbjct: 10 IQIVIIDDHQLFREGVKRILAMEPEFEV-VADGEDGENAVELVEKYNPDVIL--MDINMP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +I ++P+ +V + + ++L S +K D ++ + Sbjct: 67 KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKT---GASGYLLKEMDADALIEAV 123 Query: 121 LKKETTITS--------------------------------FLNMPTLSLSRTESSMLRM 148 P L+R E +L++ Sbjct: 124 KVVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRECEVLQL 183 Query: 149 WMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 G I + + I KTV +H NI +K+ +++ Sbjct: 184 MTDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAV 224 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 183 bits (465), Expect = 3e-45, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 71/208 (34%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R+G+ L + D E+ + + P VV D + Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDV-VADAESGEQALAYVKTHSPDVVL--LDMKMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +PN I AI + +L L K +++ I Sbjct: 65 GIDGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVL---QLGAMGYLTKESGAEEMAAAI 121 Query: 121 LKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K + P LS E ++ M +G I+D++ + Sbjct: 122 RKVAKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFL 181 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +KT++ ++ + K+ N + ++ Sbjct: 182 SSKTINGYRYRMFEKLGIKNDVELTYLA 209 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 19/214 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L + + +V + + P +V D + Sbjct: 5 IRILLVDDHPLVRDGVRMRLEATEHICVA-GEAASVGESLPLAHALAPDIVLT--DIRMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 AS + Q P +V + EY+ +L +K ++ I Sbjct: 62 AASGIHLAAVFREQFPRVRVLVLSMHDD---AEYVRRAVSLGARGYVLKDAPAQQLIEAI 118 Query: 121 LKKETTITSFLN-------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 F SL+ E+S+L+ G+ +I+ M + Sbjct: 119 EAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTSVR 178 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNG 201 TV +H+ +++RK++ + + ++T+ Sbjct: 179 TVETHRLHLRRKLRIEGQAALMKYAVDHADLTHD 212 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 78/205 (38%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + G+ L + G I +V++ + P +V D + Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTV-IGQAASVEEAIVLAGRHAPDLVVS--DIHMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 DA+ Q Q P+ I + EY+ L +++ +K +++ I Sbjct: 62 DANGLQLAARFAEQFPSVRVIALSMHKDP---EYVRRAFALGVAAYVLKEAPAHELVTAI 118 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 T +L+ E+++L++ G+ +I++++ + Sbjct: 119 RTVAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVR 178 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H+ +++RK++ + + Sbjct: 179 TVETHRLHLRRKLRVGGRAELVKYA 203 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 182 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 66/212 (31%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + + T + P V+ D + Sbjct: 31 IRVLLADDHTVVRQGLRALLSGEKDIQI-VGEAGTGREAVQMAQKLTPDVIL--MDIAMP 87 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I P+ +V + D+Y+ S IK + +D++ + Sbjct: 88 LMNGLEATRKIAEVAPSAKVLVLSSYGE---DDYVQKLTEAGASGYLIKHAAANDLVAAV 144 Query: 121 LKKETTITSFLN--------------------MPTLSLSRTESSMLRMWMAGQGTIQISD 160 + F + L+ E L +AG+ I+ Sbjct: 145 RETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGKPNKVIAC 204 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 M I KTV H+ + K+ H + Sbjct: 205 DMGISIKTVEKHRQQVMNKLNIHEVASLTRYA 236 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 182 bits (464), Expect = 4e-45, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 73/226 (32%), Gaps = 31/226 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 S II + + R GL L S + CD +P +V D + Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVT-GEASDGQMAVDLCDRNQPELVL--MDISMPR 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 Q +LI +HP +V EY+ +K S D+ + + Sbjct: 63 MDGVQATRLIKKRHPEVRVLVLTVH---GAGEYVYAALAAGADGYVLKDASNDEFILAVE 119 Query: 122 KKETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + +L+ E + ++ G +I++ Sbjct: 120 SVLGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEM 179 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR 207 + + KTV H+ N+ +K+ H+ + + + GI + MR Sbjct: 180 LVVSVKTVEKHRSNLMQKLGVHSAAELRALA-----LERGIILRMR 220 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 182 bits (464), Expect = 5e-45, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 65/212 (30%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL L + ++ C +V D + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISV-VGEVTNGQQAVDYCLKNPVDIVL--MDINMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I +PN I DEYL IS +K D ++ I Sbjct: 62 IMNGIEACRQIKKLNPNIGIIALTIHD---QDEYLFELIKYGISGYVLKDIHPDQLIKTI 118 Query: 121 LKKETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISD 160 L + L+L+ E +L+ GQ I++ Sbjct: 119 LGVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIAN 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KTV +H NI +KI ++ Sbjct: 179 ALYISEKTVKNHLTNIFQKIGVADRTQAALYA 210 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 74/202 (36%), Gaps = 20/202 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR-PSVVFINEDCFI 59 M I++D R G+ L + I D +L D + P ++ ++ + Sbjct: 4 MDIILVDDHHIVRQGMKFLLSTEASFNV-IADFNNGRELLEHLDETQLPDLIIMDL--VM 60 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + + + + I ++P+ +V + +E++L + +K ++ Sbjct: 61 PELNGIEATRRIKAKYPDVKVLVLS---SFIDEEHVLGVMDAGADGYEMKDSEPKALINT 117 Query: 120 ILKKETTITSFLNMP-------------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 I + F LS+ E +L+ G +I++++ + Sbjct: 118 IKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVSE 177 Query: 167 KTVSSHKGNIKRKIKTHNKQVI 188 KTV +H +I K++ ++ Sbjct: 178 KTVKTHVSHIFAKLEVGDRTQA 199 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 26/209 (12%), Positives = 62/209 (29%), Gaps = 26/209 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + + D R G + ++ + D+ +P V+ D + Sbjct: 6 IRVALADDQPLVREGFRYVINAQTDMTVS-GEAGDGHDIIALAKQTKPDVIL--MDVQMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + K I++ PNT ++ +EY+ +K ++++ I Sbjct: 63 RCSGIEAAKDIMSALPNTKIVILTTFDT---EEYVFEGIRAGAVGYLLKDTLPEELIDAI 119 Query: 121 LKKETT--------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + ++ E +L+ G I++ Sbjct: 120 RAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAE 179 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 ++ + TV +H I +K ++ Sbjct: 180 KLFVSESTVKTHVHRILQKCNAQDRTQAV 208 >UniRef50_C0Z7M8 Two-component hybrid sensor and regulator n=11 Tax=Bacillales RepID=C0Z7M8_BREBN Length = 602 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 34/226 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D S+ R L L + + + E C+ P +V ++ + Sbjct: 383 IRLVIVDDHSFIRESLRSILEGQRDLRV-VGLAEDGAQAVELCEELEPDLVLMDL--EMP 439 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I + P +V + + ++ +K ++ I Sbjct: 440 NMDGITATKRIKEKWPGIRILVLSTFQDTEKAKEIMRS---GADGYLLKSIESRELAETI 496 Query: 121 LKKETT----------------------------ITSFLNMPTLSLSRTESSMLRMWMAG 152 S + L++ E +L+M G Sbjct: 497 RLVHRGGTMIAQDLFHKMLDGQPVNGQEDLLVAPKQSEKDENAYGLTKREQEILQMLAQG 556 Query: 153 QGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 I+ ++ + TV ++ + K+ N+ ++ V Sbjct: 557 MRYKTIASKLYLSDGTVRNYASALYDKLGVRNRDDAVQKGKMEGLV 602 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+GL +L ++ + I + + P V+ ++ + Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEV-IGEASDGSEGVRLAVELSPDVILMDL--VME 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I + + IV + D+ + S +K +I I Sbjct: 59 GMDGIEATKQICRELSDPKIIVLT---SFIDDDKVYPVIEAGALSYLLKTSKAAEIADAI 115 Query: 121 LKKETTITSFLN-----------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + +P SL++ E +L + G+ +I +++ Sbjct: 116 RAASKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELF 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I KTV +H NI K+ ++ Sbjct: 176 ITIKTVKTHITNILSKLDVSDRTQAAVYA 204 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 182 bits (463), Expect = 6e-45, Method: Composition-based stats. Identities = 29/213 (13%), Positives = 72/213 (33%), Gaps = 26/213 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL L G + + + + + + RP VV ++ Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEV-VGETGSAAGVLALAEESRPEVVVMDLQLG-A 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + ++ + P ++ + +E + +K ++++ I Sbjct: 61 GRNGVEATRELVEKKPEIKVVILSMYDD---EELVFRALESGARGYVLKRAGIEELTTAI 117 Query: 121 LKKETTITSF---------------------LNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 L+ E +LR+ G +I+ Sbjct: 118 RLVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIA 177 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I KTV +H+ NI +K+ H++ + Sbjct: 178 RRLVISVKTVQAHRANIMQKLGLHDRVDLVKYA 210 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 182 bits (462), Expect = 7e-45, Method: Composition-based stats. Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 27/213 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I++ + R GL L + + + + RP VV + D + Sbjct: 5 VRVMIVEDQALMREGLRTLLDLEEGVEV-VGEAADGVEALERLPGARPEVVLV--DVRMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q I+ + +HP I+ + DEY+ +K +++ I Sbjct: 62 RMDGIQLIERLGREHPEVAAIILTTFDD---DEYVFRGLRAGARGYILKDTPSEELAAAI 118 Query: 121 LKKETTITSF---------------------LNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 K + LS E +LR+ +G +I+ Sbjct: 119 EKVHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIA 178 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I TV +H +I RK+ ++ Sbjct: 179 RALYITEGTVKNHISSILRKLGFRDRTQAALYA 211 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 30/224 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I + + R GL + SR + + + + +P ++ D + Sbjct: 6 IKILITEDHALVRKGLKSLISSRSEFQV-VGEADNGLAAIEMTRKCKPDLIL--LDLSMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + + P +V A+ +YL+ +K + ++ I Sbjct: 63 KMNGLATMRQLKKERPEVKILVITMHAS---QDYLIPALKEGADGYLLKGDDPQELFMAI 119 Query: 121 LKKETTITSFLNM-------------------PTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + P SL++ E + ++ G QI+D Sbjct: 120 RAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIADL 179 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVN 205 + I KTV H+ N+ +K+ H+ + + + + NGI +N Sbjct: 180 LFISPKTVDKHRTNLMKKLDLHSAREVSNFA-----LKNGIILN 218 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 24/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +I++ + R GL L + + + + RP ++ D + Sbjct: 6 ISILIVEDQTLMRQGLRTILDLEESIRV-VGEARDGAEGVREALRLRPDIIL--MDVQMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I+ II IV D+Y+ +K + +L I Sbjct: 63 VMNGVEAIRAIIAAWSQARIIVLTTFD---RDDYVFQSVRAGAMGYLLKDAPAEALLQTI 119 Query: 121 LKKETTITSFLNMPTLS------------------LSRTESSMLRMWMAGQGTIQISDQM 162 + LS E +L + G +I+ ++ Sbjct: 120 RRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSNREIAGRL 179 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +I TV +H NI K++ N+ ++ R Sbjct: 180 SITEGTVKNHVSNILAKLQAENRTQAANIAR 210 >UniRef50_B1ZU87 Two component transcriptional regulator, LuxR family n=4 Tax=Verrucomicrobia RepID=B1ZU87_OPITP Length = 212 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 14/200 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+GL + + D+E + A + RP VV D +H Sbjct: 10 IRILLVDDHMVMRMGLVTATSDEPDMEV-VADVENGAEAIEAYRAHRPDVVV--LDLRMH 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S I+ + ++ N +V+ N E + S +K +L+ +L I Sbjct: 67 GMSGVDAIRALRSEFGNVRVLVYS---NYAAGEEVYQALKAGASGFVVKEMALERLLEAI 123 Query: 121 LKKETTITSFLNMPT--------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 K LS E +L++ G+ +I+ ++++ T H Sbjct: 124 RKVHAGEQYVPPEIAMRMGERLMAQLSPRELDVLKLVAKGRSNKEIAAELHVVEGTAKIH 183 Query: 173 KGNIKRKIKTHNKQVIYHVV 192 NI K+ ++ V Sbjct: 184 VANILTKLGVSDRTQAIVVA 203 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 181 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 31/208 (14%), Positives = 69/208 (33%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL L +G + + T ++ + RP +V D + Sbjct: 6 IRILLADDHRMFRQGLRELLERKGGF-IIVGEASTGREVLAQAAALRPDIVL--LDIQMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + HP+ I+ D++L + +K D+++ I Sbjct: 63 EIDGVAVARQLAQTHPDVKVIMLTM---YRQDQHLFEAIKAGARAYLLKDADADELIDVI 119 Query: 121 LKKETTITSF----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + + ++ L+ E +L + G I+ ++ + Sbjct: 120 ERVHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIAQRLFL 179 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV + I +K+ N+ V Sbjct: 180 SEKTVGNRLSEIFQKLGVSNRTQAALVA 207 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L S + I D D P VV D + Sbjct: 4 IRILLADDHTVVRKGLRLLLESHPGFQV-IGDAADGRDAVSLAGEHTPDVVV--MDVAMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I + P+T + ++ + Y+L + +K + D++ + Sbjct: 61 GLNGIEAARQISAKLPHTAIVFLSMHSD---ESYVLKALKAGARAYLLKDSAEHDLIAAV 117 Query: 121 LKKETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + F L+ E +L++ G+ +++ Sbjct: 118 IAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAA 177 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +N+ TV +H+GNI +K+ H+ + Sbjct: 178 ILNLSLYTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 72/211 (34%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ ++ D R GL L + G + + E P ++ D + Sbjct: 3 VNVLLADDHKIVRDGLRTLLETHGSMNV-VAEAENGQKTITLARELHPEIII--MDISMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I + P I A+ HF ++ S +K + ++++ I Sbjct: 60 DMNGIDATRKITSDLPGIKVIALSMHADRHF---VIGMLEAGASGYLLKDCAFEELVNAI 116 Query: 121 LKKETTITSFLN-------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + T + + L+ E +L++ G QI+ Sbjct: 117 QTVLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAAN 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++ KTV +H+ NI +K+ + + Sbjct: 177 LHVSVKTVETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 65/207 (31%), Gaps = 25/207 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R GL L + + + + +V ++ + Sbjct: 15 RVLIVDDHELARAGLAAVLACEPGIEV-VGEADNGAAALDFVARHPVDLVMMDL--QMPV 71 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + I HP I+ A + L+ ++ +K S +I+G + Sbjct: 72 IDGIEATRRIKALHPAIGIIMVTVQAKP---DALMEALRAGVAGYLLKDASRREIIGAVR 128 Query: 122 KKETTITSFLNM-------------------PTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + P L+ E +LR+ M G+ +I+ ++ Sbjct: 129 QVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIAREL 188 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY 189 I TV H +I K+ ++ Sbjct: 189 IISPGTVKVHVEHIIAKLGVSDRTQAA 215 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL + + + E + + + +P V ++ + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQV-VAQAENGEQVIALFEEHQPDVTLMDL--RMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I I + IV + DE + +K D++L I Sbjct: 64 EVEGVAAISAICATAKSARIIVLTTYDS---DEDIYRGLQAGAKGYLLKETEPDELLNAI 120 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + LS E +LR G I+D ++I TV S Sbjct: 121 RTVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKS 180 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H I K+ ++ V Sbjct: 181 HVNRILNKLDVSDRTQAVIVA 201 >UniRef50_Q3A5X6 Transcriptional regulator, LuxR family n=2 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A5X6_PELCD Length = 223 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 24/218 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + D R GL L I + P V I+ D + Sbjct: 8 KVFLADDHPLLRTGLRMSLSRFADIDF-IGEASDGFKAVEKIKQNPPDVALIDVD--MPG 64 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI- 120 S ++++ Q+P+ ++ + ++ HF E + KSI L D++ Sbjct: 65 LSGIAAVRMLRKQYPDMTLLILSSYSDKHFIEEAMQAGADGYVLKSIDINELADLIRAFS 124 Query: 121 --------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 ++E + + L+R E +L GQG +IS+ Sbjct: 125 CGEHPMSPYLMDLAVDWHASEQEEESPADKDDESDAFLTRREQQILSCLAQGQGNKEISN 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 + I +TV +H NI +K++ ++ + + Sbjct: 185 ALFISTETVKTHIKNIFKKLEVKSRLEAVIAAKEKKLI 222 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 69/200 (34%), Gaps = 16/200 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L ++ + + D ++ + S RP +V ++ Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEV-VGDCGDPEEYRLLLKSARPDIVLMDLALG-G 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D P+T +VF + D + + S +K + ++ I Sbjct: 60 DTDGVALTAHTRATSPSTAVLVFTTYDS---DADFVRSLDAGASGYLLKDSTPVELFAAI 116 Query: 121 LKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 ++ P SL+ E +L + G+ Q+ +++ + TV Sbjct: 117 RTARDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTV 176 Query: 170 SSHKGNIKRKIKTHNKQVIY 189 +H +I K+ + Sbjct: 177 KTHVNHIFTKLGVDTRAAAV 196 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 74/212 (34%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD----SQRPSVVFINED 56 + +I+D R GL YL+ + + + + + S P V+ ++ Sbjct: 7 LKVMIVDDHDMVRTGLRTYLMLEPKFEV-VAEAGSGQAAISMLEAGLPSGLPDVILMDL- 64 Query: 57 CFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDI 116 + + + +I ++PN I+ + D+ + S +K S +++ Sbjct: 65 -MMPGMDGIETTRQLIVEYPNLKIIMLTSFLE---DDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 117 LGDILKKETT----------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + + L+ E +L + G+ +I + Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGE 180 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++I KTV +H N+ K + ++ + + Sbjct: 181 ELHISVKTVKTHVSNLLMKCELEDRTQLAVLA 212 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 181 bits (460), Expect = 2e-44, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 27/220 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL+ L + + + E RP VV D + Sbjct: 11 IRVLIVDDQPLVRRGLSLILSPDPSFEV-VGEAENGAQAVTLARRLRPDVVV--MDIRMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + P+ + DEY++ K S +D+ I Sbjct: 68 VLDGVGATRELAATVPDCRVLALSTFD---LDEYVVGALRAGAYGFLPKDSSPEDLSAAI 124 Query: 121 LKKETTI------------TSFLNMPTLS---------LSRTESSMLRMWMAGQGTIQIS 159 ++++ P + L+ E + R+ G IS Sbjct: 125 RTVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDNTGIS 184 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVT 199 ++I TV ++ +I K+ ++ V + VT Sbjct: 185 RTLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLVT 224 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 25/211 (11%), Positives = 67/211 (31%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D S R G+ L + + + + P VV ++ + Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSV-VAEADNGRKASELAADLAPHVVLMDMT--MP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ P ++ + ++ +K + +++ + Sbjct: 59 GLNGIDATQRLLAACPEVRVLILSMHKD---KRFVSQAFRAGARGYLLKDCASAELVQAV 115 Query: 121 LKKETTITSFLN-------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + + P + L+ E +L++ G + Q Sbjct: 116 RQVACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQ 175 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +NI KTV +H+ I +K+K + + Sbjct: 176 LNINVKTVDTHRQQIMKKLKMRSVAELTKYA 206 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 21/205 (10%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 ++ D R G+ L + + + + RP V+ D + + Sbjct: 1 MLADDHELVRDGIRARLQKVADLEV-VGEATNGREALTLAHDLRPDVLL--MDVSMPVMN 57 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + + P ++ N EY+ +K S +++ I Sbjct: 58 GLEAATQMRKLLPEIAVLILSVYDNP---EYVRGVVQAGARGYILKDISAAEMITAITSV 114 Query: 124 ETTITSFLN---------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + F + L+ E +L GQ +++ ++ I +T Sbjct: 115 ASGGYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRT 174 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVVR 193 V SH+ N++ K+ N +Y V + Sbjct: 175 VESHRLNLREKVGNKNAAQLYKVAQ 199 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 68/211 (32%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+G+ +L S K + + + P ++ ++ + Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKV-VGEAANGQEAVEMTAELSPDIILMDM--LMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q I+ I ++ I + A D+ L +K + D++L I Sbjct: 62 VMDGIQAIREIRDRKLPGRIIALTSFAT---DDKLFPAIKAGAMGYLLKDSTPDELLEAI 118 Query: 121 LKKETTITSFLNM-------------------PTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + S L+ E L++ G+ I+++ Sbjct: 119 RRVHRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEE 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 M + TV +H +I K+ N+ Sbjct: 179 MFVSEATVRTHMTSILSKLHLANRVEATLYA 209 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 72/207 (34%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + II D + R GL L + + + ++ P V+ D + Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEV-VGEAARGTEVPQLVRELSPHVIL--LDLSMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I+ + HP +V A ++Y++ + K + +++ + Sbjct: 59 GRNGLELIRQLRTDHPALRILVLTMHAE---EQYVVRAFRAGAAGYLTKESAATELVEAL 115 Query: 121 LKKETTITS---------------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 K T + P LS E + R + G+ QI+ + + Sbjct: 116 RKVAAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVS 175 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 AKTVS++K + K++ + + Sbjct: 176 AKTVSTYKMRLMEKLQLRSDAALVRYA 202 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 21/206 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH- 60 +I+D + R GL L + + + +D A RP V+ D + Sbjct: 5 RVVIVDDHALVRQGLRLILHGVAGIEV-VGECSCGEDALKAAVKDRPDVML--MDVHMPQ 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + P I+ + E +L + +S K + +I+ I Sbjct: 62 GLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKML---DAGVSGIVFKHDDSSEIVAAI 118 Query: 121 LKKETTITSF--------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + + LS E+ +L + G +++D ++I Sbjct: 119 QHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISV 178 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H+ +I R+I H++ + Sbjct: 179 KTVETHRQHIMRRIGLHSRAALVRYA 204 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 15/204 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D + R G L + + RP VV D + Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHV-CGEAADAAQAYQRFCALRPDVVV--MDVSLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 AS + ++ ++ + P+ ++F F L L +K+ P+ L + + I Sbjct: 63 GASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGALGYVTKASAPDVLVEAVRTI 122 Query: 121 LKKETTITSFLNM------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 ++ ++ ++ P LS E +LR+ + G I++++ + KT Sbjct: 123 ARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQKT 182 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVV 192 V++H+ I++K N + + Sbjct: 183 VANHQSVIRQKFGADNGVQLAQMA 206 >UniRef50_C0GJ72 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GJ72_9FIRM Length = 212 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 22/212 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D S R GL LL + ET+ C P V+ D + Sbjct: 5 IKVMLVDDHSVVRQGLR-LLLELDDTMEVCGEAETLTGAVAVCAEVAPDVIL--LDFKLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + Q P I+ A A+ H + +K ++++ I Sbjct: 62 DGDGIIGCGNLKRQFPQVKIIILTAYADDHL---VTETIKAGADGYLLKNVESEELINTI 118 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + +L+ E +L M G+ +I++ M I Sbjct: 119 QAVHKGQSVLDPSVTEILFDNIKSQQPKKEHNLTPKEVQILDMISVGKANKEIAEIMKIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIY-HVVRLTD 196 KTV ++ NI +K+ N+ + +R +D Sbjct: 179 DKTVRNYVSNILQKLNVSNRTEAASYWMRNSD 210 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 180 bits (458), Expect = 3e-44, Method: Composition-based stats. Identities = 31/217 (14%), Positives = 71/217 (32%), Gaps = 24/217 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL + K + + + P V + D + Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIV-EASNGKEAIDLTLEHCPDVAVV--DISMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + P+ ++ ++Y++ K + + ++ I Sbjct: 59 GIDGLEVVSRLHAELPDLPMLILTMHEE---EQYVVRAIEAGAMGYMTKKSAPEQLVTAI 115 Query: 121 LKKETTITSFLNMPTL-----------------SLSRTESSMLRMWMAGQGTIQISDQMN 163 K + SLS+ E +LR +G +I+D + Sbjct: 116 RKLHSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYH 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN 200 I KTV +++ + +K+ N I + +N+ N Sbjct: 176 ISVKTVDTYRARLLKKLNLRNNADISRFA-IQNNLIN 211 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 66/208 (31%), Gaps = 24/208 (11%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 ++D R G L + T D S +P VV ++ + D Sbjct: 24 IYLIDDHPVVREGFARALSDEPDM-VVVGQAGTAADALRETASCKPDVVLVDLNI--PDR 80 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + + Q P +V + + +K L++++ I + Sbjct: 81 DGIELLGALRAQLPQAKLLVLSGYDDEF---RVAEALRAGAQGYLVKTSKLEEVIEGIRR 137 Query: 123 KETTITSFLNMPT------------------LSLSRTESSMLRMWMAGQGTIQISDQMNI 164 T + +L+ E +LR+ AG T + + ++ I Sbjct: 138 IATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTI 197 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H+ I K+ + + + Sbjct: 198 SPKTVETHRVRIYAKLGCKSAVELTRIA 225 >UniRef50_A5WFD3 Two component transcriptional regulator, LuxR family n=3 Tax=Psychrobacter RepID=A5WFD3_PSYWF Length = 211 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R+G++ L + I + ++ + + P VV D + Sbjct: 2 IKVLVVDDHDLVRMGISRMLADDPEIEV-IGEADSGEAAIRMVKALSPDVVL--LDVNMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + K + + ++++ + LL ++ K LD+++ I Sbjct: 59 NIGGVETTKRLRQFDEKVKILAVSSVSSQPYPSMLLKA---GVNGYITKGTPLDEMIKAI 115 Query: 121 LKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K F + P LS E + M + Q QI+DQ+ + Sbjct: 116 KKVYQGSKYFSSDVAEQLADMLLTDNEESPFDRLSEREKQVAMMVVNCQSPQQIADQLFV 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV++++ I K+ + + H+ Sbjct: 176 SVKTVNTYRYRIFEKVGVDSDVKLTHLA 203 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 70/218 (32%), Gaps = 24/218 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL L + + + + P VV D + Sbjct: 11 IRVLIADDHALVREGLRYVLDADPGIEV-VGEASNGRTAVDLALQHVPDVVV--LDITMP 67 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + S + + P+T ++ EY+ + +K + +++ I Sbjct: 68 EESGLKAAARLREALPDTRVLLLSMHD---QGEYVREGMRIGTHGYLLKDSAGEELRAAI 124 Query: 121 LKKETTITSF------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 T F L+ E +L G I+ ++ Sbjct: 125 RAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAEL 184 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN 200 I +TV +H+ ++ RK++ H+ + T +T+ Sbjct: 185 GISRRTVEAHRESLMRKLQIHSVAGLTRFALETGIITD 222 >UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR Length = 194 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 81/197 (41%), Gaps = 9/197 (4%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D + L+ ++ + ++ +V D + D+ Sbjct: 4 LLLIDDHPLVEVALSAACVNSPIP-LQLFAAGDEAQARQLLQQHAMDLVI--LDIGLPDS 60 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + ++ + HP+ +++ A + H LL +L + +K +S+ +L IL Sbjct: 61 DGLELLRRLRVHHPDCPVLIYSAEQSRHT---LLRAASLGAAGYVVKSQSMAQLLSAILA 117 Query: 123 KETTITSFLNMPT---LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRK 179 +F ++P L L+ E ++ + G +QI++Q++I KTVS+HK NI K Sbjct: 118 VLGGQQAFPDLPERIDLPLTEKEQQIVALLARGLSNLQIAEQLHISNKTVSTHKKNILEK 177 Query: 180 IKTHNKQVIYHVVRLTD 196 + + + + Sbjct: 178 TGVQSVVELAALWKAHQ 194 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ L+ RGV + + + E D A D Q V+ D + Sbjct: 3 LNILLVDDHAIVRQGIRQLLIDRGVARD-VTEAENGGDAVAAVDKQEFDVIL--LDISLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + +K + + P T ++F D+Y + + K + ++G I Sbjct: 60 DTNGIEVLKRLKRKLPRTPVLMFSMYRE---DQYAVRALKAGAAGYLSKTVNAAQMIGAI 116 Query: 121 LKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + P LS E L M +G+ I++ +++ Sbjct: 117 QQVAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSL 176 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTVS ++ + K++ N + V Sbjct: 177 SVKTVSVYRSRLLEKMRLSNNAELTFYV 204 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 64/208 (30%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L + + T ++ C P +V ++ + Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGF-VVVGEATTGEEAVKFCRKNAPDLVLMDM--SMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I+ NT IV ++ + K ++ I Sbjct: 59 GIGGLEATKQILRFSENTRVIVLSVHKENPIPAKVMR---MGAFGYLTKDSDPKEMELAI 115 Query: 121 LKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K P SLS E + M G I+ +NI Sbjct: 116 RKVAAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNI 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 AKTV++H+ + K+ + H+ Sbjct: 176 SAKTVNTHRYRMFEKLNVSTDVELTHLA 203 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 62/214 (28%), Gaps = 19/214 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL L K + + + P VV ++ + Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKV-VGETTNGREAVRLARELCPDVVLMDL--LMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 I P + + + D ++ +K DD+ + Sbjct: 60 VMDGVSATAEIRQDIPEVEVVALTSSLD---DAMVMGAVRAGAIGFLLKNAEADDLRNAV 116 Query: 121 LKKETTITSFLNMPTLSL-------------SRTESSMLRMWMAGQGTIQISDQMNIKAK 167 L + E+ +L M G+ +I+ + I + Sbjct: 117 KAAAAGQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQ 176 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNG 201 TV ++ +I K+ H++ + V G Sbjct: 177 TVKTYVSHILTKLGVHSRTQAAVYAVQSGLVPAG 210 >UniRef50_B7A7I0 Two component transcriptional regulator, LuxR family n=2 Tax=Thermaceae RepID=B7A7I0_THEAQ Length = 192 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 7/193 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D RLGL L ++G + + E + + +P V D + Sbjct: 1 MRVLIADDHPLFRLGLKAGLEAQG--LAVVAEAENGQEALDKALALKPDAVL--LDLRMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + L L + K S ++ + Sbjct: 57 GMDGLTCARKLRERGYRGLIAFLTTYQEPAL---LKEAALAGADAYFSKELSAPELKRRL 113 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 L+ SL+ E +L + G +++ + + TV H N+ K+ Sbjct: 114 LRVMQGEERLTPPDLPSLTPREGEVLALLAQGLSVKEMAKALGLSPDTVKDHLENLYAKL 173 Query: 181 KTHNKQVIYHVVR 193 + N+ R Sbjct: 174 EARNRVEALEKAR 186 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 20/207 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL+ L + + + + RP +V D + Sbjct: 6 IRILLVDDHPLFRRGLSFLLAQEYGFEI-VAEATDGLEGVKLARFHRPDLVL--LDVEMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +++ P ++ + + L L +K D ++ I Sbjct: 63 VMNGPEALAQMLDFQPGLPVLMLTISED---ADNLKKCLELGARGYILKNADTDFLVEAI 119 Query: 121 LKKETTITSFLNM--------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + + SL++ E +LR G I+ +M + Sbjct: 120 RQAVAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLSE 179 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVVR 193 TV +H NI RK+ N+ R Sbjct: 180 NTVKAHMQNIFRKLNIDNRVRAAVYAR 206 >UniRef50_C5B7B5 Nitrate/nitrite response regulator protein NarP n=13 Tax=Gammaproteobacteria RepID=C5B7B5_EDWI9 Length = 215 Score = 179 bits (456), Expect = 4e-44, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 67/204 (32%), Gaps = 19/204 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R G+ L V + + + +P ++ D + Sbjct: 12 RVMIVDDHPLMRRGVRQLLELDSVFSV-VAEASNGSEAIALAGRSQPDLIL--LDLNMKG 68 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S +K + ++ + I+ + + S +K + +L I Sbjct: 69 LSGLDTLKALRSEGIDARIIILTVSDAR---SDVYALVDAGADSYLLKDSEPEALLAQIR 125 Query: 122 KKETTITSFLN-------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + F P L+ E +L+ + G QI+ Q++I +T Sbjct: 126 QAAEGRSVFSESVSAYLSTRSEIADPLADLTERELDVLQEVVRGMSNKQIAAQLHISEET 185 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVV 192 V H N+ RK+ ++ + Sbjct: 186 VKVHIRNLLRKLNVRSRVAATVLY 209 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 65/211 (30%), Gaps = 26/211 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R G + + + + P VV D + Sbjct: 7 IKVLLADDHVIVREGTRELIQRESGMMV-VGEASDGVEAVEMSMKVHPDVVV--MDIAMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + K I P T ++ A + ++Y+L +S +K +L I Sbjct: 64 RLNGIEATKQIKQLLPTTAILILTAYES---EQYILAILEAGAASFLLKNVKGTQLLEAI 120 Query: 121 LKKETTITSFLNMPT--------------------LSLSRTESSMLRMWMAGQGTIQISD 160 + T L+ E +L+M G I+D Sbjct: 121 RAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIAD 180 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 Q+ + +T+ +H NI +K+ ++ Sbjct: 181 QLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 71/202 (35%), Gaps = 17/202 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D S R GL L G + + T + +++RP +V D + Sbjct: 6 RVVLVDDHSLVRRGLAVLLRLDGRHDV-VGEAGTGEAAVPLIEAERPDLVI--LDLNMPG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + ++ + + T +V H + +K D++ I Sbjct: 63 IDGLETLRRVRAKGLTTRVLVLSMHDETHLVG---QALSAGADGYLLKDSMDDELFFAIE 119 Query: 122 KKETTITSF-----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 M +SL+ E +L++ G T +++ +NI T + Sbjct: 120 SVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTAT 179 Query: 171 SHKGNIKRKIKTHNKQVIYHVV 192 H+ N+ +K+ HN+ + + Sbjct: 180 RHRANLMQKLNVHNQVELVRIA 201 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 179 bits (455), Expect = 5e-44, Method: Composition-based stats. Identities = 28/201 (13%), Positives = 59/201 (29%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R+GL + + + + + P + ++ + Sbjct: 7 IRILIADDHYVVRMGLIALVNTEPDMEV-VAEAADGAQALELFAKCNPDLALMDL--RMP 63 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S Q I N+ ++ A DE + +K + + ++ + Sbjct: 64 VKSGVQATLEIRNRFATACVLMLTAFDG---DEDIHKALQAGAQGYVLKSSTGEKLIPAL 120 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 LS E +L G +I+D +NI T Sbjct: 121 RAVAAGQRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H +I K++ ++ V Sbjct: 181 HLKSILAKLRVADRTEAVTVA 201 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 179 bits (455), Expect = 6e-44, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 16/202 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+ D TR GL YL + + D+ + +P V D + Sbjct: 4 IRVILADDHPLTRQGLKAYLEREE-NVALVGEAADGDEAWKLIEELKPDVAL--LDIRMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 A + I I+ + + +Y+L +K S ++ I Sbjct: 61 GADGITLARRIKENKLPVAAIMLTSYDS---QQYVLASLKAGAKGFVLKTTSAGALMKAI 117 Query: 121 LKKETTITSF----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 T T +LS E +L G + +++ Q+ I +TV Sbjct: 118 QTVATGSLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERTVQ 177 Query: 171 SHKGNIKRKIKTHNKQVIYHVV 192 +H ++ K+ HNK + Sbjct: 178 THLASVYDKLGAHNKTEAMLLA 199 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 60/198 (30%), Gaps = 15/198 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D LT +L I + +P V ++ + Sbjct: 9 IRILLADDHPILGQALTMFLQCESDMTV-IGHAGDGREALELFHQHQPDVALMDL--RMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I I + + +V DE + +K +++L I Sbjct: 66 KMEGADAIAAICAKFKHARIVVLTTFDG---DEDIYRGLRAGAKGYLLKGAEPNELLDAI 122 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 M + LS E +LR+ G+ QIS+ +NI TV Sbjct: 123 RTVHKGQKYIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNIAESTVRF 182 Query: 172 HKGNIKRKIKTHNKQVIY 189 H NI K+ ++ Sbjct: 183 HTNNIFGKLNVSDRTQAL 200 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 179 bits (454), Expect = 6e-44, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 26/210 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ + R GL L + + + ++ A + P VV D + Sbjct: 5 VRVLLVEDHTIVREGLKALLTATEDLEV-VGEVADGRAAVEAAERLAPDVVV--MDINMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I + ++ +EY+ S +K L D++ I Sbjct: 62 KLDGVGATREIREKVNAPRVLILSMYDG---EEYVRPAIRAGASGYLLKGSGLSDLVTAI 118 Query: 121 LKKETTITSFLN--------------------MPTLSLSRTESSMLRMWMAGQGTIQISD 160 + F P SL++ E +L + G+ + +I+ Sbjct: 119 REVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAK 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYH 190 + + KT+ H+G I K+ HN + Sbjct: 179 ILGLSVKTIEGHRGRIMAKLGVHNVAGLVR 208 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 179 bits (454), Expect = 7e-44, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 26/209 (12%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 +++D R GLT L + + + + + + P VV D + S Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEV-VGEAGDGVEGTNLAATAAPDVVL--LDIRMPKRS 58 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + I P+ I+ + L S +K S++++ + Sbjct: 59 GIEACLAIKEAVPSAKIIMLTVSDE---EADLYEAVKSGASGYLLKDSSIEEVAQAVRVV 115 Query: 124 ETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + ++P L L+ E +LR+ G +I+ ++ Sbjct: 116 ADGQSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELF 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I TV +H NI K++ H++ Sbjct: 176 ISENTVKNHVRNILEKLQLHSRMEAVMYA 204 >UniRef50_A3TJD7 Two-component response regulator n=1 Tax=Janibacter sp. HTCC2649 RepID=A3TJD7_9MICO Length = 207 Score = 179 bits (454), Expect = 7e-44, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 19/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D R G+ L S + + + D+ VV ++ + Sbjct: 2 IRVYLVDDHQLVRAGVRTLLESDPGLSV-VGEARDGQEAVAGIDAAASDVVLMDL--SMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I++ HP+T +V + ++ E + +K D+L + Sbjct: 59 VMDGVEATRAILSTHPDTRVLVLTSFSDR---ERVKEVLAAGAIGYVLKDAEPADLLAAV 115 Query: 121 LKKETTI-TSFLNMPTL------------SLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + LS E+ +LR+ G Q++ + I + Sbjct: 116 HAAARGEVPIDPRVAGALLPSAGGPSVADRLSPRETQVLRLVAQGLANKQVARALGITER 175 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVR 193 TV +H G + R+I ++ R Sbjct: 176 TVKAHLGRVFREIGVLDRTSAALWAR 201 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 178 bits (453), Expect = 9e-44, Method: Composition-based stats. Identities = 32/207 (15%), Positives = 66/207 (31%), Gaps = 22/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I + R GL L + + E + P VV ++ + Sbjct: 3 VRILIAEDQQLVRQGLVALLA--VDDVTIVGEAEDGKGAIEMARTLAPDVVLMDL--SMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I P +V + + ++K +++ I Sbjct: 59 ELDGVEATRRIKQVAPQVRVLVLTVAN---CERRVAEALAAGADGYALKKLGHGELMAAI 115 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 T +M SL+ E +L++ G +I+D++ I Sbjct: 116 NAVCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIA 175 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H+ I +K+ HN + Sbjct: 176 IKTVETHRTKIMQKLDLHNSAELAAYA 202 >UniRef50_B4D2I0 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2I0_9BACT Length = 209 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R+GL L + + + +T + RP V DC + Sbjct: 6 IRLMLADDHFMVRMGLATSLKLEPDFEI-VAEADTGKEAISFYQHHRPDVAL--LDCRLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + + ++ A +E + S +K +I+ I Sbjct: 63 DMTGIEVTQALRAADATARILILSAFNG---EEDVFRAVQAGAESYLLKNARRTEIVTAI 119 Query: 121 LKKETTITSFL---------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 F M L+ E S+L + G +I + I V Sbjct: 120 RTVHAGSPYFPPEISAILAARMRREELTPREKSVLFEIVKGSSNKEIGCCLEITESAVKI 179 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 H ++ +K+ ++ + Sbjct: 180 HVTHLLQKLNAKDRTHAATIA 200 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 28/203 (13%), Positives = 66/203 (32%), Gaps = 20/203 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D + GL YL +R + + + P V ++ + Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEI-VGTSGNGEKAIKEIAKLNPEVAVVDL--RLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I ++P T I+ + + ++ ++ + S +K + ++ I Sbjct: 59 GLNGIEVTREIKKKNPGTEVIILS---SFNKEDEVIEAIDAGALSYVMKDSRPEKLVEAI 115 Query: 121 LKKETTITSFLN--------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 T L+ E +L + G I+ + I Sbjct: 116 KAARRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISE 175 Query: 167 KTVSSHKGNIKRKIKTHNKQVIY 189 TV +H NI +K+ ++ Sbjct: 176 TTVKTHVSNILKKLDVKDRTQAV 198 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D RLGL YL + + + + ++ +P VV ++ + Sbjct: 4 IRVMLVDDHEMVRLGLKSYLNLQPDVEV-VAEASDGEEGLAKALEVKPDVVVMDL--VMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ + P ++ + +E + +K S D+IL I Sbjct: 61 KMTGVEATLALLKEWPQAQIVILT---SYLDNEKIYPVLEAGARGYMLKTSSADEILAAI 117 Query: 121 LKKETTI-----------TSFLNMP--TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 K P L+ E +L + G +I+D+ I K Sbjct: 118 RKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLK 177 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H NI K+ ++ Sbjct: 178 TVKTHVSNILSKLAVSDRTQAVVYA 202 >UniRef50_A3TM12 Putative respose regulatory protein n=2 Tax=Micrococcineae RepID=A3TM12_9MICO Length = 217 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 16/204 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R G+ L + + + + D+ S P VV + Sbjct: 13 IRVLIVDDHPVVRSGMRTLLAASPCIEI-VGEAGNGDEALALVGSTSPDVVLSDLRLG-A 70 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + HP+ ++ + D ++ + +K D+I+ I Sbjct: 71 GLDGVGVTRAVRATHPDVAVLIITTFDH---DADIVRAVEAGAAGYLLKDALPDEIIAAI 127 Query: 121 LKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 T + LS E +L + G +I+ Q+ I TV Sbjct: 128 RAAAVGETVLSAQLTQRVVETMRVGQRPLSEREREVLVLVGEGLSNDEIAKQLFISRATV 187 Query: 170 SSHKGNIKRKIKTHNKQVIYHVVR 193 +H ++ K++ ++ R Sbjct: 188 KTHLRHLFGKLEADSRTGAVATAR 211 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 178 bits (452), Expect = 1e-43, Method: Composition-based stats. Identities = 29/208 (13%), Positives = 66/208 (31%), Gaps = 25/208 (12%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 +I+D R G+ L + + E+ ++ Q +V D + Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVT-AEAESGEEALRLLAQQPIDLVI--MDISMPGMG 57 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 I+ I +P +V + +EY+ K + +++ + Sbjct: 58 GLACIREIRAHYPAVKILVLSMHED---EEYIYKAMQYGAMGYLPKTSADNELFDALQVL 114 Query: 124 ETTITSFL-------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + P L+ E + + G +I++Q+++ Sbjct: 115 SQGRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHL 174 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +HK +I K+ + + + Sbjct: 175 SVKTVDTHKKHIYEKLHCSRRSELVTLA 202 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 177 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 68/206 (33%), Gaps = 20/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R GL L +RG + + + + + + + V D + Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRV-VGEAGSCREALELLEKVQADVAI--LDVSLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + + P + ++ EY+ K ++L + Sbjct: 59 DGTGIALCQRLRERFPELRLLALSMHEDL---EYVRGFLQAGGQGYVSKAAVDQELLDAV 115 Query: 121 LKKETTITSF--------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L + LS E +LR+ G ++++++ I Sbjct: 116 LAVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISE 175 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV++++ K+ ++ + Sbjct: 176 KTVATYRERGMEKLGLASRSELLRYA 201 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 177 bits (451), Expect = 1e-43, Method: Composition-based stats. Identities = 34/206 (16%), Positives = 71/206 (34%), Gaps = 18/206 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R G+ L S G + + + + + P +V ++ + Sbjct: 1439 LRVVIADDHALFRDGIKSLLESEGFQM--VGEASNGQEAVELVHNLSPDLVLMDL--SMP 1494 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 I+LI P+ IV A + K+++ E +L ++ Sbjct: 1495 VMGGLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRNV 1554 Query: 121 LKKETTI-------------TSFLNMPTLSLSRTESSMLRMWMAGQ-GTIQISDQMNIKA 166 ++ E I + L+ E +L++ + G T +S Q+ + Sbjct: 1555 IRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVSE 1614 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 TV H NI K+ ++ + Sbjct: 1615 HTVKYHLRNILSKLHLQSRAQVVAWA 1640 >UniRef50_UPI0001788591 two component transcriptional regulator, LuxR family n=1 Tax=Geobacillus sp. Y412MC10 RepID=UPI0001788591 Length = 202 Score = 177 bits (451), Expect = 2e-43, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 11/200 (5%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M+ +I+D L L + C+ P +V D + Sbjct: 1 MNILIVDDDPLVCQSLRLLLSREADMEVT-ATANDGAAAIQCCEEVLPDIVL--MDIRMP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q + I + P ++ + H L+ KS + S+ L + Sbjct: 58 GMDGIQAARQIKQKWPQVQIMMLTTFQDEHSIRLALLAGAEGYMLKSTQVSSMAQQLRAL 117 Query: 121 LKKETTITS--------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + + + L+ E+ +L + G +I++Q+ I TV + Sbjct: 118 ASGSSVVDANVLKTLMLPEKENRSDLTPRENDILELVALGCSNREIAEQLFISEGTVRNT 177 Query: 173 KGNIKRKIKTHNKQVIYHVV 192 I K++ ++ + Sbjct: 178 LSIILDKLELRDRTQLAIYY 197 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 68/202 (33%), Gaps = 24/202 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R L + ++ + I D + + +S RP +V ++ Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEV-IGDAADGTEAFLFIESNRPDIVLMDLSMP-P 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I P T I+ + Y+ +K S + +L I Sbjct: 59 GENGLLTTKRITEAFPETKVILLTMHDE---EAYITQALQAGAQGYIMKNSSEELLLDAI 115 Query: 121 LKKETTI-------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 LS+ E +L + G G +I+++ Sbjct: 116 RSVMGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAER 175 Query: 162 MNIKAKTVSSHKGNIKRKIKTH 183 + I AKTV HK +I +K++ Sbjct: 176 LFISAKTVEVHKSHIMKKLEMK 197 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 20/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R G++ L + + + + L A P V+ D + Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDISV-VGECDDGVALIAAVLKLSPDVIL--MDISMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S I I++Q + +V EY+ ++ +K S + ++ I Sbjct: 60 RMSGLVAIDKILSQRSDAKILVLSMHNE---VEYIEAMRDAGAKGYILKESSGESLVEAI 116 Query: 121 LKKETTITSFLNM--------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 K T F + P L+R E + + +AG + +I++ +++ Sbjct: 117 KKVAANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSL 176 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KT +H+ NI +K+ + + + Sbjct: 177 KTAENHRSNIYKKLNLSSSAELIRMA 202 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 64/218 (29%), Gaps = 31/218 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R G+ L + + + + S P VV D + Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEV-VGQAGNGREALELVASLDPDVVL--MDVMMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + P I+ H DE +L +K + I Sbjct: 60 VMDGVEATRKLAERGPRPAVIMLTTF---HDDERVLQSIAAGARGYLLKDVDHRVLADSI 116 Query: 121 LKKETT-------------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGT 155 +S + T L+ E +LR+ G Sbjct: 117 RTVAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTN 176 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +I +Q+ + TV +H I K+ ++ R Sbjct: 177 QEIGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAR 214 >UniRef50_A9U6E4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U6E4_PHYPA Length = 563 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 59/212 (27%), Gaps = 30/212 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R L L + + + E + C RP +V ++ D + Sbjct: 358 IRLLVVDDHPVIRESLRTLLEEQQDFQV-VGTAEDGEQAIELCRQLRPQLVLMDVD--MP 414 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I P+ ++ + + L + +K ++ I Sbjct: 415 IVDGISASRTIKESWPHIRILILTTFEDT---KQALEALRSGVDGYLLKSMQPLELAETI 471 Query: 121 LKKETT------------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTI 156 +S L+ E +L+ G Sbjct: 472 RTVHRGGTLIEQGMSHKLFAQLEADNSGDDPSSIKASSAYDLTPRELEILQFVSKGLRYK 531 Query: 157 QISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 I+ + TV ++ + K+ N++ Sbjct: 532 SIASNFYLSDGTVRNYASSAYLKLGVRNREEA 563 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+ D + R GL L + + + + DD P V D + Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEI-VGEAGRGDDALQLIRDLNPDVAL--LDISMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + +K ++ + T ++ + + + +K + ++L I Sbjct: 59 GLNGLDVVKRVVEEKRPTRLLLLTMHDDPTL---AIKAEQAGALGYVVKDNAFSELLDAI 115 Query: 121 LKKETTITSFL-------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 L + + LS E ++R+ GQ +I+ + I K Sbjct: 116 LAVAAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPK 175 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H+ + RK+ H + Sbjct: 176 TVDTHRTRLMRKLNLHTTADVVRYA 200 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 62/211 (29%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D R L L + + I + + P V+ D + Sbjct: 23 ISVLLVDDHVLFRQALRHLLEAEPDIRV-IGEAGDGRSAQQLAERFHPDVIL--MDISMP 79 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + PNT I+ A D +++ + +K ++ I Sbjct: 80 GVDGVTATRDLKAGIPNTKIIILTMFAE---DGHVIRAIRAGADAYLLKNSESSKVIDAI 136 Query: 121 LKKETTIT-------------------SFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + L+ E +LR+ +G +I+ + Sbjct: 137 RAVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEIAAE 196 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++ TV + + K+ ++ Sbjct: 197 LSLAESTVKNRLSLLFEKLDVKDRTQAAIYA 227 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 68/210 (32%), Gaps = 27/210 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R L + + + ET ++ +P VV ++ + Sbjct: 3 IEVLVVDDQPLVRSALRMVV-AEVDDMVIAGEAETGEEAVRLTRELKPDVVLMDL--RMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ P T +V D+++ + IK SLDDIL + Sbjct: 60 GMGGIEATGQIVRLSPETRVLVLTTFDE---DDHVFGALQAGAAGFLIKNMSLDDILDAV 116 Query: 121 LKKETT---------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 + P ++ E +L + G +I+ Sbjct: 117 RTVAHGNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIA 176 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 D++ + TV ++ + K+ ++ + Sbjct: 177 DELRLSHATVKTYITRLLSKLGARDRVHLV 206 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 69/209 (33%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I D + R G+ L + + + + + + P V+ D + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEV-VGEASNGAEAVEVVKEKAPDVLL--LDITMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + NT ++ A+ ++Y L + K L+++L I Sbjct: 59 VKDGIEATADILALNVNTKILILSMHAD---EQYALRTLRAGANGFISKGARLEELLKAI 115 Query: 121 LKKETTITSFLNMPTLS-----------------LSRTESSMLRMWMAGQGTIQISDQMN 163 + S LS+ E ++ G +I+ + Sbjct: 116 TDVHEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQ 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I KTV +H+ ++ +K++ N I Sbjct: 176 ISVKTVDTHRSHVLKKLELRNNSDITRFA 204 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 177 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 26/219 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D + R GL L +G E +P +V D + + Sbjct: 4 RILIADDHAIVREGLRVLLERKG--LEVPWMAENGRQAVCLAVKFKPDIVI--MDITMPN 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + S + I+ P T I A+ Y+ N + +K + ++ I Sbjct: 60 MNGSIATEKIMQALPRTRVIALSMHADR---RYIDRMFNAGAIAYVLKDSAFAELFDAIQ 116 Query: 122 KKETTITSFLNMPTLSL-------------------SRTESSMLRMWMAGQGTIQISDQM 162 +L S E +L++ G T QI++++ Sbjct: 117 AVGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERL 176 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNG 201 + KTV +H+ NI K+ + + V+ G Sbjct: 177 FVSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVSQG 215 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 69/205 (33%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M I+D R GL L + + + P +V D + Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDF-VIVGQAANGKEALEKMPNLMPDIVL--MDISMP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ ++ P ++ + EY+L N + ++K S ++ + Sbjct: 58 EMNGMDAAEIFKDKFPEIKILILSMHDD---KEYVLSVLNRGVRGYALKDISAAEMFYAL 114 Query: 121 LKKETTITSFLN-------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + L+ E ++LR+ +G +++ +++I + Sbjct: 115 RVIHNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVR 174 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 T+ +H+ NIK K+ + Sbjct: 175 TIETHRRNIKDKLAIKTSAGLVRYA 199 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 31/214 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + +++ +P+++ D + Sbjct: 10 IRILLADDHALFRQGLKKILDMEEDLAV-CGEAQNGEEVVDKVKLLKPNIIL--MDINMP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + K + P T I + +EYL + +K ++ I Sbjct: 67 LLNGVEATKYVKEVSPETKVIALTIHED---EEYLFEIVKEGAAGFLLKDVETPTLVQAI 123 Query: 121 LKKETTITSF-------------------------LNMPTLSLSRTESSMLRMWMAGQGT 155 + + L+ E +L + G Sbjct: 124 QEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYTN 183 Query: 156 IQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 +IS ++ I KTV +H NI RK+ ++ Sbjct: 184 KEISKELYISEKTVKNHVSNILRKMDVTDRTQAV 217 >UniRef50_C5SGD8 Two component transcriptional regulator, LuxR family n=2 Tax=Caulobacteraceae RepID=C5SGD8_9CAUL Length = 218 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 64/209 (30%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R GL L S G + + ++ P VV ++ Sbjct: 6 LRILIVDDHALAREGLKAVLTSSGFS--VVGEAADGPAAIALTEALCPDVVLMDVRLK-G 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I ++ Y+ + +K ++DD+ I Sbjct: 63 DMDGLEATRRIAALGLAARVLMLTLHDLP---AYVREALAAGAAGYVLKDTAIDDLQAAI 119 Query: 121 LKKETTITSFLNM-----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 ++ T+ SL+ E ++ + G +I + Sbjct: 120 VRVAQGQTALPLDLVSAAMRAPEPVERDPTALSSLTGREREIVHLIAEGMTNKEIGRSLG 179 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I TV +H + K+ ++ + Sbjct: 180 ISPATVKAHVERLIAKLGVTDRTQAAVLA 208 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 25/209 (11%), Positives = 63/209 (30%), Gaps = 26/209 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ L + + ++ P VV D + Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHV-VGEASDGEEAVKRVRELSPDVVL--MDVRMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ + + P ++ D ++ + +K + D + I Sbjct: 59 RMTGLEALRAMRREAPERRVVLLTTFDE---DSVVVEALRAGVKGFLLKDVTRDQLADAI 115 Query: 121 LKKETTITSFLN--------------------MPTLSLSRTESSMLRMWMAGQGTIQISD 160 + T L+R E ++R+ G +I+ Sbjct: 116 RRVANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIAT 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 + TV + NI K+ ++ Sbjct: 176 VLGTAEGTVKNQTSNILAKLGVRDRTRAV 204 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 177 bits (449), Expect = 2e-43, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 25/212 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + D + + +P V+ D + Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSV-VGQAQDGRDAILLTQTLQPDVIL--MDVRMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I + P +V DEY+ +K + I Sbjct: 59 ICDGVEATREIHQRFPWIRILVLTTFDE---DEYIWTSLQAGALGYLLKSTPASQLAAAI 115 Query: 121 LKKETT-------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 LS E +L + G+ +IS Sbjct: 116 RMLHDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQI 175 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +++ TV ++ + + ++ + Sbjct: 176 LHLTEGTVKNYVSQLLGSLGVRDRTQAALWAQ 207 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 27/218 (12%), Positives = 66/218 (30%), Gaps = 32/218 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D G++ +L + + + + + +P +V ++ + Sbjct: 3 IKILLADDHQIVLKGISFFLAMQPDFEL-VGEAHNGKEAVEKAGELQPDIVLMDL--NMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + LI QHP+ +V + A+ +++ +K D + I Sbjct: 60 IMDGIEASALIKEQHPHIKVLVLTSFAD---QSHIVPALQTGAIGYMLKDVEPDQLAEAI 116 Query: 121 LKKETT--------------------------ITSFLNMPTLSLSRTESSMLRMWMAGQG 154 S + +L+ E +L + G Sbjct: 117 RSAYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLS 176 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I+ + + KTV +H +I K+ ++ Sbjct: 177 NKDIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFA 214 >UniRef50_B2JVJ8 Two component transcriptional regulator, LuxR family n=16 Tax=Proteobacteria RepID=B2JVJ8_BURP8 Length = 219 Score = 177 bits (449), Expect = 3e-43, Method: Composition-based stats. Identities = 25/205 (12%), Positives = 70/205 (34%), Gaps = 23/205 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +++D + R G+ + + + + + +P VV I+ + D Sbjct: 6 TVLLIDDHALFRKGVAQLIQMNPAFRV-VGEASSGRVGVDLAVRLKPDVVLIDL--NMPD 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + ++++ + F++ N + ++ S +K +++ ++ Sbjct: 63 MNGIETLEMMRQHGVDARFLMLTVSDN---ERDVVAALRAGASGYLLKDMEPEELCLNLQ 119 Query: 122 KKETTITSFLNM-----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K +LS E +L + G +I+ +++I Sbjct: 120 KALQGTAVLSEAVTGKLFHALSAGQPLPANQSNLSVREQEVLDYLVEGMCNKEIARKLDI 179 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIY 189 TV H ++ K+ H++ Sbjct: 180 SVGTVKVHVKHLLHKLDLHSRVEAV 204 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL L + + + V A + P V+ D + Sbjct: 14 IRVVIADDHRVVRSGLRMVLDAEPDIAV-VAEAGDVPSAERAVRAHHPHVLV--LDLNMP 70 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I ++ + P T +V + F +K + D+++ + Sbjct: 71 GEQSLPAIPRLVAELPETAVVVLTMQQDPAF---AREALRSGARGYVLKEAADDELVQAV 127 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 T + P L+ E +LR+ G +I+ Q+ + + Sbjct: 128 RLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSIR 187 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV SH+ +I++K++ ++ + Sbjct: 188 TVESHRAHIQQKVRRSSRAELVRYA 212 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 30/217 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + GL L + + + AC RP +V ++ + Sbjct: 5 IQIVLADDQALFLEGLKTLLSLD-DSLEIVGECHNGQEALEACRRLRPQIVLMDL--NMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 K I + P + + DE + S +K ++ I Sbjct: 62 VMDGVAATKAIKQELPEVNVLTLTTFDD---DERVFEALKAGSSGYLLKDTPSKQLVEAI 118 Query: 121 LKKETTITSF------------------------LNMPTLSLSRTESSMLRMWMAGQGTI 156 + + LS+ E +L G Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 157 QISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +I+ +++ TV +H N+ K+ ++ + R Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMAR 215 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 69/207 (33%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D R G L S+G + + + D A + P VV D + Sbjct: 9 ISVLLVDDHPIVRQGYRRVLESQGDLHV-VAEADNAADAYGAFKAHDPDVVV--LDISMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 AS + I+ I + P +VF + + S K ++ I Sbjct: 66 GASGLEAIRNIRARSPRARILVFTMHNEAVL---VKAAFSAGASGFVTKSSEPSAVVNAI 122 Query: 121 LKKETTITSFLNM-----PTLSLSR----------TESSMLRMWMAGQGTIQISDQMNIK 165 + + SLS E +LR + G T QI+ +N+ Sbjct: 123 RSVARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQIATHLNLS 182 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV ++ IK K + + Sbjct: 183 VKTVQNYHYLIKTKTGARTDAQLVRLA 209 >UniRef50_Q027R2 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q027R2_SOLUE Length = 247 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 37/231 (16%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL L + + + + P ++ D + Sbjct: 23 IRIVVADDHPIFRDGLCRLLALEEDFEV-VAQAQDGRQVLDVLQQHEPDILL--LDLKMP 79 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ + T IV A + + L S +K + + ++ I Sbjct: 80 GLDGLATLQRLQIAKNKTRVIVLTASDD---KNEFVQAMKLGTSGIVLKQTATELLIKSI 136 Query: 121 LKKETTITSF------------------------------LNMPTLSLSRTESSMLRMWM 150 K LS+ E ++ + Sbjct: 137 RKVHAGEIWLDSHTTAAVIRQFVANDETPAMAAPSQAPPTRERERSPLSQREREIVALVA 196 Query: 151 AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNG 201 G +++++M I +TV +H NI K+ ++ + + + +N+ G Sbjct: 197 QGFKNKEMAEKMFISEQTVKNHLHNIFDKLGVSDRLEL-ALYAIHNNLHTG 246 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S I+D + GL L + + D +P V+ D + Sbjct: 9 VSVQIVDDHPMVQGGLKACLSFYDDI-IIVGSTDDGSDALNKAIELKPDVIL--MDISMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++I Q P T ++ +N E++ +K + ++I I Sbjct: 66 TMNGIDATEIITEQLPETKVLILSMHSNP---EFVKSAIQAGAVGYLLKDTTSEEIYYAI 122 Query: 121 LKKETTITSFLNM-------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 T F + + L+ E +L G+ + +I+ +NI + Sbjct: 123 KAVANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFR 182 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H+ N+K K+ H+ + Sbjct: 183 TVEAHRRNMKTKLGIHSLAKLISYA 207 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 69/209 (33%), Gaps = 24/209 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I D R+ + L + I + + ++ + C +P +V D + Sbjct: 5 RVLIADDHPMARMAIRSLLDPDPSFEV-IGEAQNGEEAFLLCGQIQPDLVL--MDINMPK 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD------- 114 S + + + +P+ ++ + L+ +K D Sbjct: 62 WSGLEATREVKKAYPHIKVVILSVSDD---VADLITAIQFGAQGYLLKNLEPDDWINYLH 118 Query: 115 -----------DILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 ++ ++ + + M L+ E ++ AG+ +IS+ + Sbjct: 119 ALLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEALI 178 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I TV +H NI K++ N+ + Sbjct: 179 IAENTVKNHLKNILEKLQLANRVQLAAYA 207 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 16/199 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L ++ + + + ++ +P VV ++ + Sbjct: 8 IGVLVVDDHPLLRDGLAALLGAQPDLRL-LGEAADGEEAIACYQRLQPDVVLMDL--QMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I I P IV D + S+ +K +++ I Sbjct: 65 RLDGVEAIVRIRALDPRARIIVLT---TYRGDVRAVRALQAGASAYLLKDMLRHELVDTI 121 Query: 121 LKKETTITS----------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + ++ LS E+ +LR G +I ++M I +TV Sbjct: 122 RMVAGGRRAPIPPAVAASIAAHVVEDRLSPRETEVLRHVAGGLSNKRIGERMQISEQTVK 181 Query: 171 SHKGNIKRKIKTHNKQVIY 189 +H ++ K+ ++ Sbjct: 182 AHMKSLMDKLGVGDRTHAV 200 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D + R G L + + + D C S P VV D + Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCE-VLEAGNGDQAYSLCQSDSPDVVI--MDVNMQ 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + + I+ + P+T + F + + K + + ++ + Sbjct: 58 GISGIEATRRILQKKPDTRILFFSMYDEIPV---VTQALEAGAKGYITKSCTPEILIEAV 114 Query: 121 LKKETTITSFLNMPTLSL---------------SRTESSMLRMWMAGQGTIQISDQMNIK 165 K + + L ++ E + M G +IS+Q+ I Sbjct: 115 KKVSAGQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCIS 174 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +KTVS++ +K K+ + + H+ Sbjct: 175 SKTVSNYTAILKSKLNIGSTAELVHLA 201 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 176 bits (448), Expect = 3e-43, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 71/210 (33%), Gaps = 27/210 (12%) Query: 4 IIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDAS 63 ++ D R G+ + S + + RP VV D + + + Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTV-CGEASNGREAVRLAQELRPDVVV--LDVTMPELN 57 Query: 64 NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKK 123 + + I P+T I+ + D+ L + +K ++ ++ I Sbjct: 58 GLEATREIRASVPDTEIILLTVHDS---DQLLGQALDAGARGYVLKEDAARHLVDAIDAL 114 Query: 124 ETTITSFLNMPTL---------------------SLSRTESSMLRMWMAGQGTIQISDQM 162 + SL++ E +LR+ G +++ Q+ Sbjct: 115 SKHAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQL 174 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I AKTV +H+ N+ RK+ + + H Sbjct: 175 SISAKTVETHRANVMRKLGASSIVDLVHYA 204 >UniRef50_D2R8T9 Two component transcriptional regulator, LuxR family n=4 Tax=Planctomycetales RepID=D2R8T9_9PLAN Length = 210 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 76/206 (36%), Gaps = 24/206 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S ++ D R G+ LL VK I + + + RP VV D + Sbjct: 3 ISLLVADDHEVVRAGVAAMLLGSDVK--VIAEATSGNQAIEQAMKLRPDVVL--LDVRLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ I+++ P T ++F A N Y+ L + +K + D+L I Sbjct: 59 ETDGLEALERILDRSPQTKVVMFTAYDNPT---YIARAVALGAAGFLMKGSTKADVLSAI 115 Query: 121 LKKETTITSFLN-----------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + T + + L+ E +LR G +I ++ Sbjct: 116 TRAHTGLPPENESLMGRVRNTMARRRPTYDEEIPLTNREVQVLRHVALGLSNREIGRSLD 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIY 189 I +TV H NI RK++ ++ Sbjct: 176 ISIETVKEHVQNILRKLEAGDRTEAA 201 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 68/207 (32%), Gaps = 23/207 (11%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D + R GL L S+ + + E + +P ++ D + ++ Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDM-VVVGEAEDSRTAITQATTLQPDLIL--LDLSLTNS 60 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 S I+ + P +V + + Y+ +K + +++ I Sbjct: 61 SGLAAIQSLRAAAPQARILVLTMHDD---EGYVRQALAAGAHGYVLKRAADAELIAAIRA 117 Query: 123 KETTITSF-----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 P SLS E +L + G +I+ Q+N+ Sbjct: 118 VLRGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLS 177 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +++ K+ ++ + Sbjct: 178 PKTVETYRTRGMEKLGLRSRAALVQFA 204 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 176 bits (447), Expect = 4e-43, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 80/221 (36%), Gaps = 26/221 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D + R GL + S + + + P VV + D + Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLSV-CGAAKNAHEGFELIEKTMPDVVLV--DISLPG 76 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S + IK I +P+ +V + E +L +K E ++ I Sbjct: 77 KSGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRA---GARGYLMKNEGGQKLIAAIQ 133 Query: 122 KKETT-------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 K + P +LS E + ++ G G+ QI++Q+ Sbjct: 134 KVLAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQL 193 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV-RLTDNVTNGI 202 ++ KTV +++ +IK+K+ + + H + T+GI Sbjct: 194 SLSVKTVEAYRASIKQKLYLKSGPQLVHYAISWQQSQTSGI 234 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 176 bits (447), Expect = 5e-43, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 75/208 (36%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R GL LL K + ++ + + +VF D + Sbjct: 5 LKVLIVDDHTLFRKGLKEILLDTPYIKE-CKEAKSGYEAIDILSKESFDIVF--LDIAMS 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + +K I +P T ++ ++Y + S K +++L + Sbjct: 62 DINGIETLKKIKILYPETKILMLSMYPE---EQYAIRSLKCGASGYLTKSADPEELLKAV 118 Query: 121 LKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K + P LS E + M G+ I+IS +++I Sbjct: 119 DKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSI 178 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTVS+++ I K+ N I + Sbjct: 179 SIKTVSTYRARILEKLGLENNAEIINYA 206 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 176 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R L L + + + + +++ D+Q +V D + Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEV-VAEAASGEEVLAIADAQPVDLV--CMDIAMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ +HP I A A+ F LL K E+ D++L I Sbjct: 60 GMDGIEATRRLLARHPALRVIGLSAFADRQFVTDLL---AAGARGYITKGEAGDELLRAI 116 Query: 121 LKKETTITSFLNM-----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + L+ E +L++ G ++QI D+++ Sbjct: 117 RTVCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLH 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I A TV H+ N+ RK+ HN + Sbjct: 177 IAASTVEVHRRNLMRKLDLHNVAELTRYA 205 >UniRef50_D1BCA8 Two component transcriptional regulator, LuxR family n=18 Tax=Bacteria RepID=D1BCA8_SANKS Length = 234 Score = 176 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 17/203 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R G+ G L + + + E + P VV + + Sbjct: 29 VRVVVADDHPVVRAGIVGMLGVESDIEV-VGEAEDGRQAVDLARTLSPDVVITDL--RMP 85 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ +V D +L + +K +++ I Sbjct: 86 VLDGVGATREIVALPGTVRVVVLTTYET---DGEILRAVEAGATGYLLKDTPRAELVAGI 142 Query: 121 LKKETTITSFLNM-----------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + T L+ E +LR G + ++ I TV Sbjct: 143 REAARGQTVLTPSVATRLVSQVGSRADRLTPREVEVLRAVARGLSNAAVGHELFISETTV 202 Query: 170 SSHKGNIKRKIKTHNKQVIYHVV 192 +H K+ +++ V Sbjct: 203 KTHLIRAFGKLGVNDRTHAVTVA 225 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 176 bits (446), Expect = 5e-43, Method: Composition-based stats. Identities = 32/212 (15%), Positives = 70/212 (33%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL L + + + + + P +V ++ D + Sbjct: 19 IKVLLADDHPVVRKGLGSCLNNLEHIEI-VGEAVDGQETVSKVRELSPEIVLMDLD--MP 75 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + K+I + P ++ N +Y+L +K L +++ I Sbjct: 76 TMSGLEATKIIRREFPLVKVLILSIHTN---KDYVLQIIKSGAQGYVLKDAPLTELVRAI 132 Query: 121 LKKETTITSFLNM--------------------PTLSLSRTESSMLRMWMAGQGTIQISD 160 F + L+ E+ +L M GQ +++ Sbjct: 133 ESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKEMAS 192 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +M + +TV +H+ + K+ HN + Sbjct: 193 RMGVGVRTVETHRERVMNKLDIHNVAGLTKYA 224 >UniRef50_D2SFS4 Two component transcriptional regulator, LuxR family n=2 Tax=Frankineae RepID=D2SFS4_9ACTO Length = 220 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 73/206 (35%), Gaps = 19/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL+G + + G + + + P VV ++ + Sbjct: 2 IDVLVVDDHALMRTGLSGLIAAAGDMRV-VGTAADGAEAVEEVARLAPHVVLMDL--SMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ +HP+ +V + ++ + ++ + +K D+L I Sbjct: 59 VLDGVAATRRIVEEHPSVEVLVLTSFSDR---QRVIEALDAGAGGYVLKDTEPADLLAAI 115 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 + + L+ E +L + G QI+ ++ I+ Sbjct: 116 RSTARGHSPLDPRVARTVLHARRSPVRAAELTEREQEVLALVGHGLANKQIARRLGIRES 175 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVVR 193 TV +H ++ ++I ++ R Sbjct: 176 TVKAHLTSVFQRIGVRDRTSATLWAR 201 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 176 bits (446), Expect = 6e-43, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 76/212 (35%), Gaps = 22/212 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 S +I+D + L S+G + + S RP +V D + Sbjct: 4 SVLIVDDHPVVCEAIRKTLESQGY--TIVGETADGISALNMILSLRPDIVI--LDVSLEK 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 +K I + + +VF A + D Y + S K E L +L + Sbjct: 60 MDGLTVLKRIAQANLDVRVLVFTAQS---VDTYAMRCLQAGASGFVSKNEPLTKLLKAVD 116 Query: 122 KKETTITSFL---------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 F + +L+ E +L++ G ++I++++++ Sbjct: 117 TIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSN 176 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 KTVS HK NI K+ + + ++ R + V Sbjct: 177 KTVSGHKINILSKLGVTSVVDLVNIARQNELV 208 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 75/211 (35%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S II D + R G+ L + + + D+L D+ P +V D + Sbjct: 5 ISIIIADDHTLIRDGIKSLL-QSVDEFEVVGEATDGDELIQFIDTLDPEIVV--LDITMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + I + + FIV N EY+L S +K ++I+ + Sbjct: 62 KKSGIEVITEVKKYNNRVKFIVLSMHDNP---EYVLKSVQSGALSYLLKNTDHEEIIKAV 118 Query: 121 LKKETTITSFLNMP-------------------TLSLSRTESSMLRMWMAGQGTIQISDQ 161 F +L++ E +L+ G T I+D+ Sbjct: 119 KAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIADK 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I +TV +H+ N+ +K+ HN + Sbjct: 179 LFISVRTVETHRINLMKKLDVHNSAELIKKA 209 >UniRef50_D1C3I4 Two component transcriptional regulator, LuxR family n=2 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C3I4_SPHTD Length = 249 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 37/219 (16%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I+D R GL + G K + + + + D RPS+ I D + Sbjct: 12 TVLIVDDHPLFRQGLRRLIEEGGAFKV-VAEATSGHEAIREADIHRPSIALI--DIQLPG 68 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + +++ QHP+ I+ DE L S+ K +++ + Sbjct: 69 VTGLNVARILKKQHPSMHIIILSMH---VDDERLFEAVRAGASAFLTKDIEAQELISSLD 125 Query: 122 KKETTITSF-------------------------------LNMPTLSLSRTESSMLRMWM 150 + + L LS E +L Sbjct: 126 RVVQGEQLINLEVMSRPELAWRVLSEFRQLTGDDGEAGPASDPKRLPLSVREVEVLDCVA 185 Query: 151 AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 G +I++ + I +TV +H ++ RK++ +++ Sbjct: 186 QGLSNKEIAEALFITEQTVKNHMTSVLRKLQVNDRVQAV 224 >UniRef50_A7NQF6 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NQF6_ROSCS Length = 221 Score = 175 bits (445), Expect = 7e-43, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 20/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D GL G L + + L + +RP VV ++ + Sbjct: 8 IRVVLADDHELVLEGLRGLLERESDM-IVVATATDGESLLAIIERERPDVVVMDL--AMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ I + ++ A + L + ++K + + I Sbjct: 65 TRDGLSCLREIRRRGMPVKVVILTAFGD---GGALQSAWEMQADGFALKTDPPRQTIATI 121 Query: 121 LKKETTITSFLNMPT--------------LSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 F + L++ E +LR+ G QI++++ ++ Sbjct: 122 RNVAHGQIVFPRVVRQAADATQAHGQSLLARLTQRERDVLRLLAEGMPNAQIAERLVVQE 181 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 TV H NI +K+ N+ V Sbjct: 182 STVKYHLQNIFQKLGVTNRTEAAQVY 207 >UniRef50_C2RNB5 Two-component protein Kinase n=1 Tax=Bacillus cereus BDRD-ST24 RepID=C2RNB5_BACCE Length = 304 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 29/214 (13%), Positives = 64/214 (29%), Gaps = 27/214 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+D S+ R L L + + E + C +P VV ++ + Sbjct: 91 IRLCIVDDHSFIRESLHTILSGLEDLQV-VGMAEDGEQALELCGRLKPDVVLMDL--EMP 147 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K+I + P ++ N + ++ +K ++ I Sbjct: 148 NLDGIHATKMIKKRWPEIRVLILSTFQNTERAKEIIR---NGADGYVLKSIDSRELAESI 204 Query: 121 LKKETT---------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 S + LS+ E +L + G I+ Sbjct: 205 RLVYRGGAMITHDLFHRMWEENKETGLFESRSDGIEYGLSKRELEILELLSQGSRYKTIA 264 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 + + TV ++ N+ K+ N++ + Sbjct: 265 STLYLSNGTVRNYASNLYEKLGVKNREEAVQKAK 298 >UniRef50_A5URU4 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexi (class) RepID=A5URU4_ROSS1 Length = 242 Score = 175 bits (445), Expect = 8e-43, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 34/214 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R G+ L G + + + E + + P VV + D + Sbjct: 5 IRVLIIDDHPLFRQGIRWSLEEAGDMEV-VGEAENGQEAIKLAERLVPDVVLV--DINLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++I + P IV + D+ L + ++ S K D++ I Sbjct: 62 GLNGLEVARVIKRREPRIGLIVISVYED---DDQLFQAIKVGAAAYSSKDVHPRDLVRMI 118 Query: 121 LKKETT----------------------------ITSFLNMPTLSLSRTESSMLRMWMAG 152 + + L+ E +L G Sbjct: 119 REVARGKYLINDSVIAKPHVATRVLHQFRELAATEDERTSALFAPLTSREIEILDCIARG 178 Query: 153 QGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQ 186 +I+ Q++I +TV +H +I K++ +++ Sbjct: 179 LSNKEIASQLSISGQTVKNHITSILSKLQVNDRT 212 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 175 bits (444), Expect = 8e-43, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 73/210 (34%), Gaps = 26/210 (12%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +++D R G+ L G + + + E D C P +V D + Sbjct: 5 IVLVDDHKLVRDGVRMILER-GSEFLVVGEAENGADAVQLCKKSSPDIVL--MDIGLPGM 61 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + + ++ P+ I+ + + ++ + +K S +++L + Sbjct: 62 NGIEATTELLRHCPSVKVIILSMYDD---ENSVVSAIRSGARAFVLKKASSNELLDALRT 118 Query: 123 KETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + P SLS E +LR+ G+ + I+ + Sbjct: 119 VARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLL 178 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ +TV S++ + +K+ +N + + Sbjct: 179 DLGLQTVRSYRKTMMKKLGVNNVAGLTQLA 208 >UniRef50_A9VLR5 Two component transcriptional regulator, LuxR family n=31 Tax=Bacillaceae RepID=A9VLR5_BACWK Length = 595 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D + R L L + E + C +P V+ ++ D + Sbjct: 383 IRLLIVDDQPFVRESLRTLLDRYEDLNV-VGLAEDGNQAIDLCGRLQPHVILMDLD--MQ 439 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K I Q P+ ++F + E L +K ++ I Sbjct: 440 HMDGVEATKKIKQQWPHIRVLIFTTFQDT---EQALESLRNGADGFLLKSIETLELANTI 496 Query: 121 LKKETT--------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 T L+ E +L++ G I+ Sbjct: 497 RLIHKGGTLIDQGMSHKIFEKFDEQIETPQSKATAYELTAREIEILQLVAKGLRYTTIAS 556 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ + TV ++ K+ NK+ Sbjct: 557 RLYLSNGTVRNYASTAYTKLGVRNKEEAVQKA 588 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 35/209 (16%), Positives = 75/209 (35%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIAC----DSQRPSVVFINED 56 + I++D + R G+ L + + + + +VD+ D + P +V D Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRV-VGEAGSVDEAMQLATDLGDERAPHIVLT--D 61 Query: 57 CFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDI 116 + S + L ++ P +V N+ EY+ +K ++ Sbjct: 62 ISMRGMSGIELAALFQHRFPGIDVLVLSMHNNL---EYVKRAIESGAKGYVLKDAPAQEL 118 Query: 117 LGDILKKETTITSFLNMPT-------------LSLSRTESSMLRMWMAGQGTIQISDQMN 163 + I T F L+ ES+ L G QI+ +++ Sbjct: 119 VNAIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELS 178 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + +TV +H+ N++RK++ + + Sbjct: 179 MSVRTVETHRLNLRRKLRITGQAELVKYA 207 >UniRef50_UPI00017468E1 two-component response regulator n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017468E1 Length = 210 Score = 175 bits (444), Expect = 9e-43, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 64/198 (32%), Gaps = 15/198 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + + AC + P VV ++ + Sbjct: 8 VRILLVDDHFVVRSGLAASLGLEEDLLV-VAEAGSAAEALTACAAHTPDVVIMDL--QLG 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + HP +VF + A DE + K +D+L I Sbjct: 65 EVNGITCTEQLGQAHPGIRILVFSSFA---RDEDVYRAIRAGALGYLQKSAPREDLLKAI 121 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L S E +L G+ +I+ + + +TV Sbjct: 122 RTVGLGKRYLPGDIAQRLAERLGRPEPSPREREVLAQMAKGRSNKEIASVLGLSEETVKR 181 Query: 172 HKGNIKRKIKTHNKQVIY 189 H N+ K+ ++ Sbjct: 182 HVSNVLEKLGAQDRTQAV 199 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 175 bits (444), Expect = 1e-42, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 72/212 (33%), Gaps = 27/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R+GL L + + + T D+ + +P V D + Sbjct: 6 IRVLLADDHPIVRVGLRALLEAEPDIAV-VGEAGTADEAVELARTLQPDVAV--LDISMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ I + T ++ A + YLL S K D++ I Sbjct: 63 G-NGLEALRRIASLGLPTRTLILTVHAE---ERYLLPVLQAGGSGYVRKSSLHTDLVEAI 118 Query: 121 LKKETTI--------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 T + P LS E +LR+ AG +I+D Sbjct: 119 RLVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIAD 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 Q+ + KTV +++ + +K+ + + Sbjct: 179 QLFLSPKTVETYRHRVMQKLGFSRRSELVRFA 210 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 26/219 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D + GL+ L S+ + + T + C + P VV D + Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEV-CGQVGTAKEALDTCKEKCPDVVL--LDLSLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + IK + + + + + Y +K + D+++ I Sbjct: 60 DKQGHEIIKELKESC-SARVLALTMHED---EAYFKRVVEAGGDGYILKKAADDELISAI 115 Query: 121 LKKETTI-------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 LS E +L++ G +I+++ Sbjct: 116 RSVYQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEK 175 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN 200 + I KTV +H IK K+ + + + + ++ Sbjct: 176 LYISIKTVETHIARIKEKLGLNRRSELVRYAMRNNIIST 214 >UniRef50_C1XKQ4 Two component transcriptional regulator, LuxR family n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XKQ4_MEIRU Length = 194 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 63/193 (32%), Gaps = 6/193 (3%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I D R+GL L G + + + P V D + Sbjct: 1 MRLLIADDHPLFRMGLRAALEREGFA--VVAEAGDGQEAVKLGLELLPDGVL--LDVRMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 +++ Q N L + + SK + PE+L + L + Sbjct: 57 QMDGITATRMLREQRYNGLIALLTTFNEPVLVQQAAYAGADAYWSKELPPEALAERLRRL 116 Query: 121 LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI 180 +P L+ E +L+ G T +I+ QM+I +TV H + K+ Sbjct: 117 GLGLEPRLRAPELP--RLTAREQEVLQWMAQGLSTKEIARQMHISPETVKDHLLRLYEKL 174 Query: 181 KTHNKQVIYHVVR 193 + N+ R Sbjct: 175 EARNRVEALERAR 187 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 30/206 (14%), Positives = 71/206 (34%), Gaps = 20/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + + +D R+G++ YL ++ + + + + + +P ++ ++ + Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEV-VGEGASGKEAIAKAHELKPDLILMDL--LME 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + I P ++ + D+ + + + S +K S DI + Sbjct: 60 DMDGVEATTQIKKDLPQIKVLMLT---SFIEDKEVYRALDAGVDSYILKTTSAKDIADAV 116 Query: 121 LKKETTITSF--------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 K + F L+ E +L + G +I+ +I Sbjct: 117 RKTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITI 176 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H NI K++ ++ Sbjct: 177 KTVKTHVSNILSKLEVQDRTQAVIYA 202 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 31/220 (14%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L S K I + + ++ + P VV + + Sbjct: 5 VKVLMVDDHPLFRQGVRWALSSERDIKI-IGEGSSAEEGLVLISEHEPDVVLTDL--NLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I Q+PN ++ + L SK I P++L +L + Sbjct: 62 NMDGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYYSKEISPKTLATVLRRV 121 Query: 121 LKKE-------------------------TTITSFLNMPTL---SLSRTESSMLRMWMAG 152 + E T I + ++ LS E +L +G Sbjct: 122 ARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIASG 181 Query: 153 QGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I+D + I +TV +H +I RK+ +++ Sbjct: 182 ATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYA 221 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 66/210 (31%), Gaps = 26/210 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++D R+GL + + I + RP +V D + Sbjct: 43 RIYVVDDHPLMRMGLRAMINGEPDMEV-IGEAADSATATAEIMKLRPDLVIA--DISLRG 99 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S + IK + P +V Y L + +K + +L I Sbjct: 100 NSGIELIKNVKAFDPGIDVVVVSMYDESI---YALRVLKAGARAYVMKQDVTTRVLDAIR 156 Query: 122 KKETTITSFL--------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + + P SLS E ++ + G T +I+ + Sbjct: 157 RARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTREIAAK 216 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHV 191 + + KTV +H+ +IKRK+ N + Sbjct: 217 LFLSIKTVETHRVHIKRKLNLANATQLVQF 246 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 174 bits (443), Expect = 1e-42, Method: Composition-based stats. Identities = 26/211 (12%), Positives = 63/211 (29%), Gaps = 26/211 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D R GL L R + + + P +V D + + Sbjct: 8 RILLADDHDIVRRGLRTLLELRSDWEI-CAEASDGRAAVQFAEDLAPDIVI--LDLSMPE 64 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + I P + ++ ++++ + +K ++ D+ + Sbjct: 65 LNGLEAARRIAAHCPRSRMLMLTMHET---EQFVREALAAGVRGYILKTDAGRDLANAVD 121 Query: 122 KKETTITSF--------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 T F + L+ E +L++ G+ + Sbjct: 122 ALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGKA 181 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +NI KT +H+ I K+ + + Sbjct: 182 LNISVKTAETHRARIMAKLGIDSVADLVRYA 212 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 65/213 (30%), Gaps = 28/213 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R GL L + + + RP + D + D Sbjct: 5 RLLIVDDHPLFREGLKAILRRDPSYAVA-GEAGSYAEALRTAKDCRPDLAV--LDISLPD 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S Q + + P+ ++ A +Y+ + K + D++L + Sbjct: 62 RSGIQLARELRQMLPSLGILMVSMHA---KVDYVAEALKVGALGYLTKDAATDNLLSGLR 118 Query: 122 KKETTI----------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQIS 159 + SL+ E ++R+ + G +++ Sbjct: 119 AVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKEVA 178 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I KT H+G++ RK+ N + Sbjct: 179 AALEISVKTAEHHRGSLMRKLGMQNSVELVRYA 211 >UniRef50_Q46SR4 Two component transcriptional regulator, LuxR family n=14 Tax=Burkholderiales RepID=Q46SR4_RALEJ Length = 232 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 18/204 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I+D R+ L +L S+ + + + + P VV ++ D Sbjct: 28 TILIVDDHPAVRVVLKTHL-SQVLGVTHVLEADNGQAAVEIVRQYAPDVVILDLDI--PR 84 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + I + P +V F + + K + L +I+ + Sbjct: 85 INGLDVIPRLKAIQPGVRILVISGQDQNTF---APRARQAGANGYVSKTQELPEIVRCVE 141 Query: 122 KKETTITSFLNM------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + ++ SLS E +++M G QI + + I KTV Sbjct: 142 SVLAGYSVMPDVDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTV 201 Query: 170 SSHKGNIKRKIKTHNKQVIYHVVR 193 S+HK I K+ + + R Sbjct: 202 STHKTRIMEKLGARSLVDVIDFAR 225 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 174 bits (442), Expect = 1e-42, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 72/207 (34%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL L K + + E+ + P V ++ + Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKV-VAEAESGEQAYQVFGEYLPDVTVMDL--SMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ I+ ++ ++F N + + K S D+++ + Sbjct: 63 GMGGLEAMRRILARYRTARVLIFSMHEN---AAFAMQTLKSGARGYVAKTGSFDELVKAV 119 Query: 121 LKKETTITSFLN---------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 ++ + LS E + R++ G+ +I++ + I Sbjct: 120 VEVARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKIS 179 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV+++ +K+K+ N + Sbjct: 180 QKTVANYHTLVKQKLGLSNPVEMVRFA 206 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 67/207 (32%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G L + I + + +P +V D + Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQ-DNLEVIAEACDGTEAYSQYKKYQPDIVV--MDISLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S + I+ I +VF N F L K +D++ I Sbjct: 62 GQSGLKAIERIRQFDAKAKILVFSMHQNPSF---ALQATRAGALGYITKSSDPEDLIRAI 118 Query: 121 LKKETTITSFL---------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + L+ E +LR+ + + I++ +NI Sbjct: 119 AEVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNIS 178 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTVS+ IK+K+ + + + Sbjct: 179 PKTVSNSHYIIKKKLGVSSDIELTRLA 205 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 26/220 (11%), Positives = 62/220 (28%), Gaps = 33/220 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R G+ L + + + E + +P ++ D + Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEV-VGEAEDGQEALARTLMLKPDILL--LDINMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K + I + D Y+L +K + ++ I Sbjct: 60 GLTGLDVAKQLKQARSRVKIIALTIHDS---DNYVLELLKNGALGYLLKDVEPNVLIKAI 116 Query: 121 LKKETTITSF--------------------------LNMPTLSLSRTESSMLRMWMAGQG 154 L+ E +L G Sbjct: 117 HMVNEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLS 176 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQV-IYHVVR 193 I + + KTV +H ++ K+K +++ + +V++ Sbjct: 177 NQDIGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVYVLK 216 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 29/206 (14%), Positives = 66/206 (32%), Gaps = 21/206 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +++D + R G L + K + + + +P +V ++ + Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKV-VAEAGDGAEAYRLFKQVKPDLVIMDLT--MPG 62 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + +K I P +VF N + + K + ++ Sbjct: 63 LGGVEAVKRIRQWDPAARILVFTMHQN---AAFAVQAIRAGAKGYVTKSSPPEALIRGAF 119 Query: 122 KKETTITSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + T L+ E +LR+ +A + T I+ + + Sbjct: 120 DVLQGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSP 179 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV++ + IK K+ + + V Sbjct: 180 KTVANTRYLIKAKLGVASDIELVLVA 205 >UniRef50_B8GUD1 Two component transcriptional regulator, LuxR family n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUD1_THISH Length = 227 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 21/218 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D + R GL L G+ + + + P V+ D + Sbjct: 4 RVLLIDDHTLFREGLQELLKRHGI--DTVGAVGDGETGIDLARDLLPDVIL--LDMRMPA 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + ++ + ++ L K ++P L D L +IL Sbjct: 60 MNGLEVLRRLRQAGLKMPIVMLTTSTEEQDLVECLRNGAQGYLLKEMEPGDLVDALEEIL 119 Query: 122 KKET-----------------TITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + +T + ++ P L+ E +L + GQ I+ + I Sbjct: 120 QGKTVVAPDLAQLLVRVVQGKSSSANEPSPFDELTPREGEILALLAEGQSNKVIARNLGI 179 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGI 202 TV H I RK+ H++ + + G+ Sbjct: 180 SDGTVKLHVKAILRKLGVHSRVEAAVLAVQQGLRSGGL 217 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 66/207 (31%), Gaps = 24/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL L + G + I + T ++ +P VV D + Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEV-IGEASTGEEALTVAQRLQPDVV--CMDIRMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I P IV DEY+ +K S+ D++ + Sbjct: 62 GGDGLEATRRIQQLEPAPAVIVITTFD---MDEYVFGALEAGACGILLKDSSMTDLVEGV 118 Query: 121 LKKETTI------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + S + L+ E + G +I+ + Sbjct: 119 RRAALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTL 178 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY 189 ++ TV +H + K THN+ + Sbjct: 179 FLEPSTVKTHLSSAMAKTGTHNRVQLV 205 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 29/212 (13%), Positives = 67/212 (31%), Gaps = 27/212 (12%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R GL L + I + + + P ++ D + Sbjct: 4 RIMLVDDHPVFRSGLKHILCTEADYHV-IAEADDGESAIEMAAEANPDIII--MDISMPG 60 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + I + P+ ++ A+ + +L + S +K +++ + Sbjct: 61 LDGIEVTREIKRKIPDIRILMLTMYAD---EAFLKESLDAGASGYVLKRAVDTELVHAVK 117 Query: 122 KKETTITSF---------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 + + LS+ E +L+ G +IS Sbjct: 118 LVMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEIST 177 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I KTV ++K + KI + K + Sbjct: 178 ELFISIKTVDTYKKRVMEKIGSKKKSALVRYA 209 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 174 bits (441), Expect = 2e-42, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 14/198 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S II+D G+ L + + ++ + P +V + + Sbjct: 4 ISVIIVDDHQLMLEGIASLLRATPDITL-VAKAQSAKEAFELVKQHNPDIVVADL--SMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ I + T I+ + ++ ++ +K ++ +D++ I Sbjct: 61 GVTGLDLIQQIKDAGLLTRIIMLTMHRTRLT---VHEAFSVGANAFVLKSDAFEDLVDII 117 Query: 121 LKKETTITSFLN--------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSH 172 + + + +LS E +L AG +IS ++ I +KTV +H Sbjct: 118 HRVHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETH 177 Query: 173 KGNIKRKIKTHNKQVIYH 190 + I +K+ + Sbjct: 178 RSRIMQKLNVTKATELVR 195 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 74/207 (35%), Gaps = 20/207 (9%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +I D GL L + I + D+ +P ++ D + Sbjct: 9 TILIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLIL--LDINLPH 66 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + + + P+ ++ + E L + ++ +K S D ++ + Sbjct: 67 RNGVDIARQLRREFPHVGVVIITMYSYQKLTEELR---AVGVAGYLLKSASPDRLMTCLT 123 Query: 122 KKETTITSFLNMP---------------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 + F +P SL+ E ++R+ G T QI++++ + A Sbjct: 124 SVVSGKPFFDQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLFLSA 183 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVVR 193 +T+ +H+ NI K+ ++ + Sbjct: 184 ETIKTHRKNIYFKLGINSVAALILFAN 210 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 70/216 (32%), Gaps = 23/216 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + II D GL + + I + + V D + Sbjct: 7 IKVIIADDHHMVLEGLEALIKVTNDIEV-IGLAYNGHHAFKLLELNQLDVDIAVLDVDMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I ++PN ++ N + Y+ S +K +++ I Sbjct: 66 VQDGLETTRKIRTEYPNIKVLILTMHNN---ESYIKEIIAAGASGYILKNRGASELVNAI 122 Query: 121 LKKETTITSFLNM------------------PTLSLSRTESSMLRMWMAGQGTIQISDQM 162 F P + L++ E +L + G T +IS Q+ Sbjct: 123 RTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQL 182 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY-HVVRLTDN 197 I TV +H+ N+ K++ N + + +V + ++ Sbjct: 183 FIADTTVETHRRNLIDKLEVKNSKELILYVAKNKES 218 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 25/212 (11%), Positives = 65/212 (30%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + + D G+ L + + + + + + + P V + D + Sbjct: 5 IRVALADDHPIVLAGIRTLLNADPEIEL-VGEATSGSEALPMIHAADPDVAVV--DVSMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + P T +V + + + LL +K + +D+L + Sbjct: 62 GLNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKA---GARGYLLKRSAAEDLLRAV 118 Query: 121 LKKETTITSF--------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 +LS E+ +LR+ G +I+ Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + ++ K++ ++K K+ + I Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYA 210 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 69/206 (33%), Gaps = 21/206 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I+ D R G+ + + + E + + A +P VV D + Sbjct: 5 RIILADDQLLIRAGIRAIVETLPGFQIE-AECTDGYEAISAIQRLQPDVVL--LDIAMPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S + + I PNT +V ++ E + ++ +K L ++L + Sbjct: 62 PSGIEVARTIRQFDPNTKILVLSSVDRP---EIIEQALAAGVNGYLLKDFVLAELLQALE 118 Query: 122 KKETTITSFLNMPTL---------------SLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 L+ ++ +LR+ +G+ T +I+ + I Sbjct: 119 MVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLGISP 178 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV H+ + +I H+ + Sbjct: 179 KTVEFHRSRLMERIGVHDVTGLTRFA 204 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 67/209 (32%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+ L E + + RP VV D + Sbjct: 4 IRMVLIDDHKLFRDGMKKLLEMEPDFSLE-GEASDGIEGLALIKRSRPDVVL--LDIGMP 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + + NT F+ A + + L ++ + +K ++L I Sbjct: 61 NLDGIGLIRELRSTEQNTKFVAITAFND---ERKLSELSSVGVHGFVLKSSGRTELLSAI 117 Query: 121 LKKETTITS-----------------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 L+ E +L G ++IS +MN Sbjct: 118 RSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAKMN 177 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV +H +I +K+ ++ + Sbjct: 178 LSEKTVKNHVSHILKKLDLRDRTQAAILA 206 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 36/218 (16%), Positives = 75/218 (34%), Gaps = 23/218 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKK--REINDIETVDDLAIACDSQRPSVVFINEDCF 58 + +++D R+G+ G L R + + + + ++ + +P VV D Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEAKRLKPDVVL--MDIN 59 Query: 59 IHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILG 118 + + I+ P+ +V A+ ++L S K +++++ Sbjct: 60 MPGIGGLVATRRIVEAQPSVKVLVLTAMDEGPVPRWVLEA---GASGYLTKGCRIEEMIA 116 Query: 119 DILKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQM 162 I P LS E +L M + GQ I+ + Sbjct: 117 AIQGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATAL 176 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN 200 NI KTVS++K + K+ N + + + + Sbjct: 177 NISPKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIAS 214 >UniRef50_A8L9Z7 Two component transcriptional regulator, LuxR family n=2 Tax=Frankia sp. EAN1pec RepID=A8L9Z7_FRASN Length = 218 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 29/210 (13%), Positives = 63/210 (30%), Gaps = 23/210 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D GL+ + + + + + ++ P VV D + Sbjct: 8 IRVLLADDHRLVLDGLSALI-DSVDGLTVVGEATSGEQAVDLAGTEHPDVVL--MDIEMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + I P ++ DE++ +K D++ I Sbjct: 65 GIGGVEATRRITTAQPTIAVVMLTMYGE---DEFVFAALRAGARGYLLKGAQQKDVVRTI 121 Query: 121 LKKETTITSF-----------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 F N P L+ E +L + G +I+ + Sbjct: 122 GAVARGDAVFGPDVAHRVLRTFTSPPAENAPFPELTEREREVLSLLANGWPNSRIARHLQ 181 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 + KTV+++ NI K+ ++ R Sbjct: 182 LTPKTVANNVSNILAKLHAPDRTAAILRAR 211 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 31/209 (14%), Positives = 67/209 (32%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R G+T L + + + +D +P VV D + Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQV-VGQADCGEDCLKLARELKPDVVL--MDVKMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ P+ +V F L + K L++++ I Sbjct: 59 GIGGLEATRKLLRSQPDIKVVVVTVCEEDPFPTRL---MQAGAAGYMTKGAGLEEMVQAI 115 Query: 121 LKKETTITSFL-----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + + P SLS E + M ISD++ Sbjct: 116 RQVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLC 175 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV++++ I K+ + + + Sbjct: 176 LSPKTVNTYRYRIFEKLSITSDVELALLA 204 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 173 bits (440), Expect = 3e-42, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 16/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL L + + S P + D + Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIHIA-AECGDGATALELIRSLEPDIAV--LDITMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + N T I+ + + +K ++ +++L + Sbjct: 59 KLDGISITRAMGNLGLATRAIILTMHDDPLMYG---RAVSAGAHGFILKDDAYEELLSAL 115 Query: 121 LKKETTITS----------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 T+ P L+ E +L + G I+ + I KTV+ Sbjct: 116 RTVAAGGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVN 175 Query: 171 SHKGNIKRKIKTHNKQVIYHV 191 +H+ N+ K+ H+ + Sbjct: 176 NHRTNLMGKLNLHSTAELVRY 196 >UniRef50_C4ZEG3 Two-component response regulator (Extracellular proteinase response regulator) n=3 Tax=Bacteria RepID=C4ZEG3_EUBR3 Length = 214 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 23/206 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +I D S R GL L G K I + E +D + RP V+ D + Sbjct: 3 INIMITDDHSMIREGLKNLLELDGDIKV-IAEAENGEDCLDKLKTFRPDVLL--LDINMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +K + ++ +V EYL+ ++ I+ +K ++ I Sbjct: 60 KMNGLEVLKALKDRKSKVKVLVLTVHNET---EYLMKAVDIGINGYVLKDSESAELKKAI 116 Query: 121 LKKETTITSFL-----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 T + +L++ E +L+ G+ I+ +M Sbjct: 117 FTIADGETYIQPSLIPALNSKMIQKNEDELKIDALTKREMEVLKEMAVGKFNRDIAKEMK 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIY 189 I +TV +H +I +K++ ++ Sbjct: 177 ISERTVKNHISSIFKKLEVTDRTQAA 202 >UniRef50_C4RJG1 Two-component system response regulator receiver n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJG1_9ACTO Length = 264 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 65/213 (30%), Gaps = 24/213 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL L I + T + + + R VV D + Sbjct: 54 IRVLIVDDHPVVRRGLRTMLEGESWVD-GIAEAATCAEAVSSVVADRVGVV--AMDVALP 110 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I+ P T ++ + ++ + +K D I+ + Sbjct: 111 DGDGVEATRRILLSRPETRVLMLTMADD---EDVVNRSLRAGARGYVLKDTDPDVIIDAL 167 Query: 121 LKKETT------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 L P L+ E +LR G+ +I+ + Sbjct: 168 RTVAGGGLVLGPRVGPQVLTTLQRQPVELPPPFDRLTPRERDILRHLATGETNARIARRF 227 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLT 195 + KTV + + K+ ++ + R Sbjct: 228 GLSEKTVRNQLSAVFAKLGVTDRVQAALLARDA 260 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 63/211 (29%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D GL L + + A + +P V ++ + Sbjct: 3 IRVLLADDHEMFLEGLRELL-GKADGIELAGLARDGAEAVAAAERLQPDVALMDMT--MP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + Q + I P T +V + ++ +K S ++ I Sbjct: 60 RLNGIQATQKIAAGSPGTKVLVLSMHGD---KNLIVESLKAGARGYVLKECSSQELCLAI 116 Query: 121 LKKETTITSFLNMPTL-------------------SLSRTESSMLRMWMAGQGTIQISDQ 161 LS E +L++ + G QI++Q Sbjct: 117 QTVANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQ 176 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++I TV +H+ +I K+ ++ + Sbjct: 177 LSISKNTVDTHRRHILDKLGCNSMAELTRYA 207 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 173 bits (439), Expect = 3e-42, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL +L + + + ++ A + P VV ++ + Sbjct: 10 VRVLLVDDHAVVRQGLRLFLSLDSQIEV-VGEAANGEEALAAAERLHPDVVIMDL--MMP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q +L+ QHP+T I + H + +K S D + I Sbjct: 67 VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVN---GAIDAGAMGYMLKDASSDTLADAI 123 Query: 121 LKKETTITSFLNMP-------------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 +L+ E +L++ G I+ + Sbjct: 124 HAAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIARDQGVTEA 183 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H + K+ ++ Sbjct: 184 TVKTHVSRLLGKLGLESRTQAALYA 208 >UniRef50_B9L0W5 Nitrate/nitrite response regulator protein n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0W5_THERP Length = 261 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 27/219 (12%), Positives = 70/219 (31%), Gaps = 33/219 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R + +L + + + + + + RP + ++ + Sbjct: 32 VKVLVVDDHPLFRFAVRQFLDRHERFRV-VAEAASAHEAVQQAELHRPDLALVDL--RLP 88 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + Q +L+ Q+ ++ A N + +LL + ++ K ++L + Sbjct: 89 GINGLQVTRLLKRQNGKLPVVLLSADEN---ESWLLGALQVGAAAFLAKDSEPREMLAVL 145 Query: 121 LKKETTITSFLN---------------------------MPTLSLSRTESSMLRMWMAGQ 153 P L+ E +L G Sbjct: 146 EAVVAGEDRLPQQILDRPHLARRVLGELQRYVVGEAGLESPDAVLTVRELQVLDCVAQGM 205 Query: 154 GTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I++ + I +TV +H +I RK+ ++ + Sbjct: 206 SNKEIAEALFITEQTVKNHMTSILRKLGAQDRVDVILAA 244 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 67/202 (33%), Gaps = 16/202 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 +S +++D S R G L + + E P VV D + Sbjct: 6 ISVLLVDDHSLVRRGFRRMLEDDPAI-VVVGEAEDGHQAVQLAGELHPRVVV--MDFAMP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + I+ P T ++ A Y+ + +K +++ + Sbjct: 63 SMNGAVAARHILRTAPETAILILSMHAE---ASYVRTCLEAGVRGYLLKNALDLEMVAAV 119 Query: 121 LKKETTITSFLN----------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + L+ E +L++ + G+ +I+ +++ A TV+ Sbjct: 120 KQVAAGKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVA 179 Query: 171 SHKGNIKRKIKTHNKQVIYHVV 192 H+ NI + + HN + Sbjct: 180 VHRANIMQTLGIHNTAELVVYA 201 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 26/212 (12%), Positives = 74/212 (34%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR------PSVVFIN 54 + +++D + R GL YL + + +++ + + + P VV ++ Sbjct: 11 VRVMVVDDHAIVRRGLRAYLETVPDLRL-VSEAADGQEAVDLLNERHVVGDPMPHVVLMD 69 Query: 55 EDCFIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLD 114 + + + I+ +P+ +V + + E + + + +K + Sbjct: 70 L--QMPRLDGIEATRSILASYPDVKVVVLTSFSE---AERVHAALSAGAAGYVLKDAEPE 124 Query: 115 DILGDILKKETTITSF--------------LNMPTLSLSRTESSMLRMWMAGQGTIQISD 160 ++ + + SL+ E +L + G +I+D Sbjct: 125 EVATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNREIAD 184 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I +T +H N+ K++ ++ + Sbjct: 185 RLVISERTARTHVSNVLSKLQLSSRTQAALLA 216 >UniRef50_A6TUG7 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TUG7_ALKMQ Length = 201 Score = 173 bits (439), Expect = 4e-42, Method: Composition-based stats. Identities = 25/203 (12%), Positives = 60/203 (29%), Gaps = 17/203 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D L L + + C P VV D + Sbjct: 1 MKILIVDDDQLVCQSLQVLLSREQDMDV-MATANNGAEAITCCRDILPDVVL--MDIQMP 57 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q + I + P ++ + ++ + + + IK + + + Sbjct: 58 VMDGIQATREIKKEWPQIRIMMLTTFQD---EQNIRLAISAGAEGYLIKSTEVSSMAQQL 114 Query: 121 LKKETTITSF-----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 + + L+ E ++ + + G +I++Q+ I TV Sbjct: 115 RVLFSGTSVLDADVLKRLMQPQRKGFEELTPRERDIVELVVQGLSNREIAEQLYISEGTV 174 Query: 170 SSHKGNIKRKIKTHNKQVIYHVV 192 + I K++ ++ + Sbjct: 175 RNTLSIILEKLQVRDRTQLAIYY 197 >UniRef50_C6CWJ3 Two component transcriptional regulator, LuxR family n=4 Tax=Bacillales RepID=C6CWJ3_PAESJ Length = 235 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 25/223 (11%), Positives = 69/223 (30%), Gaps = 34/223 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D + R G+ + + + + + ++ D P +V D + Sbjct: 8 IRVFLVDDHPHGREGMREIIGADPEFMV-VGEAASGEEAIARIDDVLPDLVL--MDINMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + +P+ ++ ++ + R K++ P + + L + Sbjct: 65 GMGGLEATQQLKYLYPSLKIVMVTVSDDITHLFEAIKRGAQGYLFKNLSPSAWREYLRAV 124 Query: 121 LKK-------------------------------ETTITSFLNMPTLSLSRTESSMLRMW 149 + + + T L+ E +L Sbjct: 125 VDDEAPMSKEIAFRLLQEFTSAASNGIKPAKTGSKPGHAGDASAMTTPLTAREKDILERV 184 Query: 150 MAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + G+ +I+ + TV +H NI +K+ N+ + Sbjct: 185 VTGESNKEIAVAFGLSEHTVKNHLKNILQKLHLDNRVQLTRYA 227 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 72/213 (33%), Gaps = 27/213 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R GL L + + I + ++ D P +V ++ + Sbjct: 5 LRIVLADDHAVLRAGLKVLLNAEPDLEV-IGEASDGEEAIDRVDDLHPDLVLLDLT--MP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ ++ +H + +V + +EYL + +K + ++L I Sbjct: 62 KLNGVDCIEELLKKHADLKILVLTMHDD---EEYLKAVLQVGAKGYVLKKAADVELLSAI 118 Query: 121 LKKETTITSF---------------LNMPTL------SLSRTESSMLRMWMAGQGTIQIS 159 P LS E +LR G I+ Sbjct: 119 RTVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIA 178 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 D +++ KTV ++K + K++ H + + Sbjct: 179 DLLHVSVKTVETYKARVMEKLEMHKRAELVRYA 211 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 172 bits (438), Expect = 4e-42, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 77/217 (35%), Gaps = 23/217 (10%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR----PSVVFINEDC 57 +++D + R G+ +L + + + + + + + P +V D Sbjct: 116 RVLLIDDHALVRDGMRMHLTLQPGLEV-VGEADDGEAALAWLAAAEAGRMPDLVIT--DI 172 Query: 58 FIHDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDIL 117 + + +++P ++ N+ EY+ +K D++L Sbjct: 173 GMRGMGGIALAGALHDRYPELAVLIVSMHDNL---EYVRQAIRAGARGYVLKDAPADELL 229 Query: 118 GDILKKETTITSFLN-----------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 I + P +L+ E +L GQ I+ Q+ + Sbjct: 230 AAIQAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSV 289 Query: 167 KTVSSHKGNIKRKIKTHNKQVI--YHVVRLTDNVTNG 201 +TV +H+ N+KRK+ + + Y V +L +V G Sbjct: 290 RTVETHRLNLKRKLGIEGRAELVKYAVQQLGLDVEGG 326 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 28/206 (13%), Positives = 55/206 (26%), Gaps = 22/206 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +I+D R G+ L + + + + V+ D + Sbjct: 9 VMIVDDHPLMRRGVRQLLELDPGSEV-VAEAGDGASAIDLANRLDIDVIL--LDLNMKGM 65 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 S + + I+ + + +K + +L I Sbjct: 66 SGLDTLNALRRDGVTAQIIILTVSD---ASSDVFALIDAGADGYLLKDSDPEVLLEAIRA 122 Query: 123 KETTITSFLN----------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 F P L+ E +L G QI+ +NI Sbjct: 123 GAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISE 182 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 +TV H N+ RK+ ++ + Sbjct: 183 QTVKVHIRNLLRKLNVRSRVAATILF 208 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 66/205 (32%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL +L + + + ++ + RP VV ++ + Sbjct: 14 VRVLLVDDHAVVRQGLRLFLGLDEGIEV-VGEAANGEEALQEAERLRPEVVVMDL--MMP 70 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + P+T I + + + S +K S D + I Sbjct: 71 VMDGITATRELRRRLPDTEVIALT---STLEENKVNGAIEAGAISYMLKDASSDTLADAI 127 Query: 121 LKKETTITSF-------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 SL+ E+++L++ GQ I+ + + Sbjct: 128 HAAARGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGVSEA 187 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H + K+ ++ Sbjct: 188 TVKTHVSRLLSKLGLDSRTQAALYA 212 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 61/211 (28%), Gaps = 24/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR-----PSVVFINE 55 + +++D R GL L + + D + +V ++ Sbjct: 4 IRVLLVDDHPVVRAGLRAMLADFPGVTV-VAEASEGDAALVELSKLHTLGEPVDLVLMDL 62 Query: 56 DCFIHDASNSQRIKLIINQ---HPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPES 112 + I +P ++ D +L S +K Sbjct: 63 QMG-SGMDGVTATEKIKAGEGGNPPPPVLILTTYDT---DADILAAVEAGASGYMLKDAP 118 Query: 113 LDDILGDILKKETTITSFL-----------NMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 + I +L T+ P+ +LS E +L + G ++ Q Sbjct: 119 PEQIRQAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAKQ 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + I TV +H +I K+ N+ V Sbjct: 179 LFISEATVKTHLVHIYSKLGVDNRTAAIAVA 209 >UniRef50_A6TNJ5 Two component transcriptional regulator, LuxR family n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TNJ5_ALKMQ Length = 212 Score = 172 bits (438), Expect = 5e-42, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 20/203 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ +++D + R G+ + K + T+ + +P +V D + Sbjct: 6 VTILLVDDHAIVRYGIRSLIERNDGLKV-CGEAGTLQEAYHKVSDLKPDIVL--LDIKLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + I + P+ I+ A A D +L +K +I+ I Sbjct: 63 DGDGAAGCREIKKRVPDVKVIILTAYAE---DSIILEAVKAGAEGYLLKDIDSKNIITAI 119 Query: 121 LKKETTITSFLNMPTLS--------------LSRTESSMLRMWMAGQGTIQISDQMNIKA 166 TS N L+ + S+L + G+ I+ ++ + Sbjct: 120 RNVVGGKTSLANEAISKVLNEVKQNCSGEDDLTSQDKSILELISQGKSNKDIAKEIYVSE 179 Query: 167 KTVSSHKGNIKRKIKTHNKQVIY 189 KTV ++ I +KI N+ Sbjct: 180 KTVRNNASRIFKKINAGNRTEAA 202 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 172 bits (437), Expect = 5e-42, Method: Composition-based stats. Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 19/205 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D S R GL+ YL ++ + + + + + V+ D + Sbjct: 4 IRVALVDDHSIVRRGLSAYLAAQPDI-VVVGEAANGESALQMASTWQADVIV--MDVLMP 60 Query: 61 DA-SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + + + P+T I+ A+ D ++ + K + +L Sbjct: 61 GGIDGIETTRQLKRLIPHTHIIILSGYAD---DARVIGALRAGAITYIEKESQPEQLLEA 117 Query: 120 ILKKETTI------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAK 167 I + + +L+ E +L++ G +I+ ++ + + Sbjct: 118 IRGAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSEE 177 Query: 168 TVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H +I RK+ ++ Sbjct: 178 TVKTHVASILRKLGLAHRTQAAIYA 202 >UniRef50_C4RQT0 LuxR family two-component system transcriptional regulator n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RQT0_9ACTO Length = 279 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 61/215 (28%), Gaps = 23/215 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + + D + R G+ L + + + + + RP V+ D + Sbjct: 61 IRVCLADDHTLLRDGIREMLSTEPEFAV-VGEASSGPEAVALAVRLRPDVLL--LDVEMP 117 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + T IV + LL + +K DD++ + Sbjct: 118 GPGAAAVIRQVRRTASETRVIVLTMHDDPDMVHELLEA---GAVAYLLKTILRDDLVAAV 174 Query: 121 LKKETTI-----------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 L+ E +LR+ QI+ ++ Sbjct: 175 RSVVRRPTQSVLLAVSRETVERLDRQKPRTNGTPLTSRELEVLRLTAEAMSNAQIASRLF 234 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 I TV H NI K++ ++ + Sbjct: 235 ITEATVKRHLTNIYAKLQAVSRVDAIRKATAARLI 269 >UniRef50_C1XS11 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XS11_9DEIN Length = 204 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 28/204 (13%), Positives = 65/204 (31%), Gaps = 17/204 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL +L + + + ++ ++ + P +V D + Sbjct: 3 LRLLIVDDHPIVREGLKAFLGLYADLEV-VGEADSGEEALSKSRALSPDLVL--LDLQLS 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + ++ ++ + ++ L +L S +K +L I Sbjct: 60 DGHGLSFLPRFLSLPNPPKVLILTSFLE---EDRLRQALSLGASGYLVKHAGPVALLEGI 116 Query: 121 LKKETTITSF-----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 P SL+ E +L G I+ + + KT+ Sbjct: 117 RAAGRGEVPLDPAAVRLLARPARNPLASLTPKEREVLTHLARGMSNKAIAQALGVSEKTI 176 Query: 170 SSHKGNIKRKIKTHNKQVIYHVVR 193 +H ++ K+ + + R Sbjct: 177 KTHVSSLLAKLNLKGRTQAALLAR 200 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 172 bits (437), Expect = 6e-42, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 70/204 (34%), Gaps = 18/204 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + + + + +V D + Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEV-LAEADNGQQALEILNKMPVDLVLT--DINMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++LI Q + ++ N EY++ +K +++ I Sbjct: 59 QMDGMYLLELIKEQELSCKVVMLSMHDN---KEYIMATMRYGADGYILKDVPGKELIEAI 115 Query: 121 LKKETTITSFLNMPTLSL------------SRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 K F +L ++ E +LR+ G +I+ +M++ +T Sbjct: 116 KKVAAGKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRT 175 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVV 192 V +HK NIK+K+ + + Sbjct: 176 VETHKRNIKQKLMIDSTAGLVRYA 199 >UniRef50_B5JUM2 Two component transcriptional regulator, LuxR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUM2_9GAMM Length = 223 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 31/222 (13%), Positives = 75/222 (33%), Gaps = 24/222 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQR-PSVVFINEDCFI 59 + ++++ R + G L G + + ++ + C P V+ ++ + Sbjct: 2 IRLLLVEDQDLVRYAVKGLLEGEGSICV-VGECDSGESALSYCRENALPDVILMDL--HM 58 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + I+ +HPN ++ + ++L L + K S ++ Sbjct: 59 PGIGGIEASHAILQEHPNARILILTGQSESPLPKHL---MELGVYGYITKKSSPREMQQA 115 Query: 120 ILKKETTITSFLNM--------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 I + P +LSR E +L G +I M + Sbjct: 116 ISQVSAGHRYLSQDEAQRLALGGSGASNPLDALSRREMELLIKIALGCTNREIQKHMQVS 175 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVVR---LTDNVTNGIFV 204 KT+S+++ + K+ + + + + + ++V G Sbjct: 176 PKTISTYRTRLMEKLDAKSDVELARIAQQYGVVESVYGGGVA 217 >UniRef50_Q1IT25 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IT25_ACIBL Length = 227 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 30/214 (14%), Positives = 60/214 (28%), Gaps = 28/214 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL L S I + + P V+ D + Sbjct: 10 VRILIADDHTIFRDGLRRLLESEPEFDV-IGEAADGGEAVQQARRLGPDVLL--LDLAMP 66 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ + +T I+ A ++ +K + +L I Sbjct: 67 RVPGLDALRELTTDDSSTKIIILTAA---IEKAQIVQALQAGAKGIILKESATQLLLKGI 123 Query: 121 LKKETTI----------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQI 158 + L++ E +L +AG +I Sbjct: 124 RSVMAGQYWVGRESVNDIVEYLKSTAAGAQADSQAKNFGLTKREMEILGTIVAGFTNKEI 183 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + + N+ TV H NI K+ ++ + Sbjct: 184 AKKFNLSEDTVKHHLTNIFDKVGVSSRLELALFA 217 >UniRef50_Q67JS2 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67JS2_SYMTH Length = 211 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GL L + + + + C S RP VV D + Sbjct: 3 IRVLIVDDHELLREGLKSLLSREEDMEV-VGEAAGGREAVALCRSLRPDVVV--LDARLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + + P ++ ++ +L +K D+ I Sbjct: 60 DVDGVEVCRQLQEEMPEVAVLMLTTFSDSDL---VLGAVRAGARGYVVKDVLGMDLKRSI 116 Query: 121 LKKETTI-----------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 S + L+R + +++R+ G +I+++M Sbjct: 117 RAVARGEVAMDPKVVGYLMQQMRSPSADKEERIPLNRQQLAIIRLVAQGYTNREIAERMF 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV + R++ N+ V Sbjct: 177 LSEKTVKGYLAEAMRRMGVKNRVEAAMVA 205 >UniRef50_B8FX94 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FX94_DESHD Length = 212 Score = 172 bits (437), Expect = 7e-42, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 66/208 (31%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL L + + ++ + ++ ++ + Sbjct: 2 IRVVIADDHPLLREGLRRILEFEEGIQV-VCEVGDGQGAINVSRTLDFDILLMDL--NMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++I ++ +V + DE + L ++ +K ++ I Sbjct: 59 GVNGLEACRVIRRENETIGILVLTVDDS---DEKVFQVLQLGVAGYLLKDVDPKTLIDSI 115 Query: 121 LKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 K + N T LS E +L + G +I + I Sbjct: 116 RKVHSGQPILSPAVTGKLLGQLVHPTQNRDTCGLSDRELQILTYVVKGSSNREIGQALFI 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H +I RK+ ++ Sbjct: 176 SEKTVKNHLSSIFRKLAVEDRTQAALKA 203 >UniRef50_A0RGC1 DNA-binding response regulator n=12 Tax=Bacillales RepID=A0RGC1_BACAH Length = 597 Score = 172 bits (436), Expect = 7e-42, Method: Composition-based stats. Identities = 29/220 (13%), Positives = 73/220 (33%), Gaps = 25/220 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + L L ++ + + I C+ +P +V D + Sbjct: 381 IRLLVVDDQALITNSLEQILENQTDF-IVVGKAYDGSEALILCEQLQPDIVL--MDIQMP 437 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + + + PN ++ + L KSI P+ + + L I Sbjct: 438 EMNGIEALLEMKRRWPNMKIVLMTTFEDSLQAATALEHGAEGYMLKSIHPQEMKEALKLI 497 Query: 121 ----------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQI 158 ++ I S L++ E +L G I Sbjct: 498 YNGGTWIDQSVATRIFEEMKLQREQLAKIKSTKQTFPYGLTKREMEILEHLSNGLRYKSI 557 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 + ++ + T+ ++ N+ K+ N++ + R + + Sbjct: 558 AAKLFLSEGTIRNYCSNLYSKLGVSNREEAIKMARTENIL 597 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 32/223 (14%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++D + R GL L + + + P +V D + Sbjct: 7 KIFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVIT--DISMPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S +K + Q+PN I+ N EY+ L I+ +K ++ +D+L I Sbjct: 62 LSGIDLVKNLRKQYPNIRTIILSRHDNR---EYVQKLLELGINGYVLKDDAGNDLLRAIE 118 Query: 122 KKETTITSFL------------------------NMPTLSLSRTESSMLRMWMAGQGTIQ 157 T LS E +L++ G Sbjct: 119 AVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNES 178 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTN 200 I + I TV H+ NI +K+ H + + + Sbjct: 179 IGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIES 221 >UniRef50_C5SBA1 Two component transcriptional regulator, LuxR family n=3 Tax=Gammaproteobacteria RepID=C5SBA1_CHRVI Length = 238 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 66/213 (30%), Gaps = 28/213 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D + R GL L RG+ + + RP VV D + Sbjct: 1 MRVLLIDDHALFRFGLQELLERRGI--EVVAAVGESSTGLERVAETRPDVVL--LDMRMP 56 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ + H + + A + ++ +K D ++ + Sbjct: 57 GLNGLELLRRLRAAHQSMPIAMLTTSAE---ERDVIDSLQSGAQGYLLKDMEPDALIAAL 113 Query: 121 LKKETTITSFLNMPT---------------------LSLSRTESSMLRMWMAGQGTIQIS 159 + T + T L+ E +L GQ I+ Sbjct: 114 GEIVQGRTVVASELTGVLARAVRGESTPVPVVSGGAADLTPREQEILCHLAEGQSNKTIA 173 Query: 160 DQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I TV H I RK+ H++ + Sbjct: 174 RELGISEGTVKLHVKAILRKLDVHSRVEAAVIA 206 >UniRef50_UPI000050F8A6 two component transcriptional regulator, LuxR family protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F8A6 Length = 222 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 29/223 (13%), Positives = 63/223 (28%), Gaps = 36/223 (16%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + II D S R GL L + I + + P ++ D + Sbjct: 3 IRVIIADDESLMRSGLRLLLGAADDIDI-IAEAANGAEAIELARELSPDLIL--MDIRMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + ++ Q + ++ A DE++L + +K +D++ + Sbjct: 60 VMDGLEATRALMAQTLHPEVLILTAFGT---DEFVLQALRSGAAGYILKDTPPEDLIHAV 116 Query: 121 LKKETTITSFLN------------------------------MPTLSLSRTESSMLRMWM 150 + P L+ E + Sbjct: 117 RAAANGTRTLSPSAVESLLGRDTTSATGVAGASNWNSVPIGPDPLEPLTTREREIAEAVA 176 Query: 151 AGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 G Q++ + + TV +H I K+ + + +V Sbjct: 177 QGMTNAQVARALFVSTATVKTHLARIFYKLDVSTRVQLALLVN 219 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 30/202 (14%), Positives = 66/202 (32%), Gaps = 18/202 (8%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 ++ D R GL + ++ + + + + + + P V + D + Sbjct: 5 RIVLADDHVILREGLRALISAQPDLEV-VGEAASGTETVDCVRATEPRV--LCLDLSMPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 ++ I + P T +V + Y+ + +K D+L I Sbjct: 62 WGSATTITRVTQLAPRTRVLVLTMHNDP---AYVRSALAAGAAGYFLKTTPSPDLLAAIR 118 Query: 122 KKETTITSF------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTV 169 T LSR E+ +L + + G +I+DQ+ + KTV Sbjct: 119 AVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSVKTV 178 Query: 170 SSHKGNIKRKIKTHNKQVIYHV 191 +++ ++ K + Sbjct: 179 ETYRARLREKTGLKTRADYVRY 200 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 172 bits (436), Expect = 8e-42, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL + + + + P +V ++ + Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEV-VGEADGGQAAVRLAGELCPDLVLMDL--RMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I+ + P+T + + D++L +K S +++L I Sbjct: 59 GMDGITATQRILAERPSTRVVALTTFDD---DDHLYPALAAGACGFLVKDTSPNELLEAI 115 Query: 121 LKKETTITSF-------------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 K T F L+ E +L + AG + I+++ Sbjct: 116 RKAADGDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAER 175 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +++ TV +H ++ K N+ + + Sbjct: 176 LHLGVTTVKTHIASLMTKTGCSNRVRLAVLA 206 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 21/212 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINE----D 56 + +++D R G L+S + + + + S P VV ++ D Sbjct: 5 IKILLVDDHPLVRAGFQRLLISDESIEI-VGEADNGQSACEMYASHMPDVVIMDLNMPSD 63 Query: 57 CFIHDAS-----NSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPE 111 + S + I+ II+ P +V A+ F +++ +K P+ Sbjct: 64 ANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGAKGFLTKRCAPD 123 Query: 112 SLDDILGDILKKETTITSFLNMP-----------TLSLSRTESSMLRMWMAGQGTIQISD 160 L + + I E IT + + SL++ E + + G+ +++ Sbjct: 124 ELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSIVAE 183 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +M + KTV +H+ NI RK+K N + H+ Sbjct: 184 EMFLSPKTVHAHRTNIFRKLKISNNSELVHLA 215 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 16/200 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D + R G+ L + + + + + ++ D + Sbjct: 6 IRIALIDDHALVREGIRALLEVLPHFQV-VGEAGSGAEAFDLLQRTPVDILL--MDVGLR 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + + + ++P ++ N EY+ + S +K +I+ I Sbjct: 63 DINGLELTRQLRERYPAIKVLMLSMYDN---QEYVSSSLAVGASGYVLKEAPSREIVAAI 119 Query: 121 LKKETTITSF----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + + L+ E +L M G ++ + I +TV Sbjct: 120 EAIAAGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVE 179 Query: 171 SHKGNIKRKIKTHNKQVIYH 190 +H+ +I+RK+ + Sbjct: 180 THRLSIRRKLAIDKPADLLK 199 >UniRef50_C5BV53 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5BV53_BEUC1 Length = 220 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 74/209 (35%), Gaps = 24/209 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 + +++D R G+ L + G + + V + RPSVV ++ + D Sbjct: 3 TVLVVDDHPVYRRGIAHLLAAGGY--DVVGEAAGVREAEQLALRLRPSVVIMDL--GLPD 58 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 S I+ +P T +V + D + + +K D+IL + Sbjct: 59 GSGVDATSRIVAANPGTRVVVVTLFDD---DGSVQRALAAGAAGYVVKDADPDEILAAVR 115 Query: 122 KKETTI-----------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 ET + L+ E +L + + G I++++ + Sbjct: 116 AVETGAMVLGAHLAGAVLGAAAVAARPAEDVWGLTPRERQVLDLLVKGLTNRAIAERLGL 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 KTV+++ I K+ ++ +VR Sbjct: 176 SGKTVANNVSVILGKLGATDRVEATQLVR 204 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 172 bits (436), Expect = 9e-42, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 21/214 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+ D + GL L I + T + A +P V+ D + Sbjct: 2 IRLILADDHRLMQDGLKSRLERE-DNLDIIACVGTGTEALEATLELKPDVLL--LDINMP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + ++ + T I+ + +Y++ +K ++++ I Sbjct: 59 NLNGIEVLEQLAKTSSATSVIMLSMHDSR---DYVVRSVKAGAKGYVLKDVGSEELVMAI 115 Query: 121 LKKETTITSF---------------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + +LS+ ES +L+ G G +I+D ++I Sbjct: 116 NQVAQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHIS 175 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVT 199 +TV +H+ IK+K+ + + + VT Sbjct: 176 VRTVETHRLRIKKKLGATSTAALVKLALQKGLVT 209 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 16/200 (8%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 ++ I D R G+ L + TVD+ RP V+ + + Sbjct: 21 VTVAIADDHHVVRQGIEALLRMCPDM-EYVGGASTVDEARQLVHRTRPDVLVSDL--SMP 77 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 S ++ + + P+T +V A + + + K ++ D ++ I Sbjct: 78 GGSGVGFLRNLRRECPDTRIVVLTMHAT---ALAMQDAFDSGAHAFVAKDDAFDTLVSII 134 Query: 121 LKKETTITSF----------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVS 170 + + + T L+ E +L+ G T +I Q+ + KTV Sbjct: 135 RRVHSGEEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVE 194 Query: 171 SHKGNIKRKIKTHNKQVIYH 190 ++G + +K + H Sbjct: 195 VYRGRLMKKFNVTKGTELIH 214 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 60/206 (29%), Gaps = 20/206 (9%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R GL+ L S + + ++ + D + Sbjct: 8 LRILLADDHRVLRKGLSLLLSSEEDFSV-VAEASDGEEALEKAAKTPVDIAL--LDLSMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ + P ++ + +Y+ + K ++ + Sbjct: 65 HMGGLECLRRLKAMQPAVRVLILTMHSER---QYVCECLRAGANGYLCKDTLDAELFRAL 121 Query: 121 LKKETTITSFLN--------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 +LS E +L + + G I+D++ + Sbjct: 122 RTVAAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSI 181 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTVS++K + +K+ + Sbjct: 182 KTVSTYKTRLLQKLDCTQNSELVDYA 207 >UniRef50_B4CV47 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CV47_9BACT Length = 209 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 15/201 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D R GL L + + +++ A RP VV D + Sbjct: 6 IGVLLVDDHFMVRRGLAVALRVEKDLAV-VAEAGNCEEMLAAYRQHRPDVVL--LDWRLP 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + ++ L+ +HP ++ A+ DE++ + + +K +I+ I Sbjct: 63 GPNGAEATALLREEHPGARVLMLSALDG---DEHIHLAVRAGAAGYVLKSAERGEIIQAI 119 Query: 121 LKKETTITSFLNMPTLSL---------SRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + F L S E +L AG+ +I D + I TV Sbjct: 120 RAVHGGKSYFSPGLEALLHDRARKVEISPREREVLVRAAAGERNKEIGDHLGISEATVKV 179 Query: 172 HKGNIKRKIKTHNKQVIYHVV 192 I +K+ ++ + Sbjct: 180 FMARIFQKLDARDRAHAVVIA 200 >UniRef50_C4KAM8 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=C4KAM8_THASP Length = 217 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 28/207 (13%), Positives = 65/207 (31%), Gaps = 22/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R+G L G + + + + A P V+ D + Sbjct: 10 LRILLADDHAVVRMGFRLLLEGAG--AEVVGEADCGEAAVQAFGQLHPDVLL--MDVSMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ ++ HP ++ A + K D++L + Sbjct: 66 GIGGLGALERVLAHHPAARVLMLSAHDDAQIPA---RALRAGAGGYLSKRAHPDELLHAV 122 Query: 121 LKKETTITSFLN---------------MPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 P +L+ E ++ G+ +I++ ++ Sbjct: 123 ATVARGQRYIDPAIAPALALAQFAGGGDPVAALTEKEFAVFLQLARGRSVAEIAETHSLS 182 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 TV +H +IK+K++ N + V Sbjct: 183 PSTVGTHLYHIKQKLEVSNAAELALVA 209 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 171 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 33/221 (14%), Positives = 74/221 (33%), Gaps = 28/221 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I D R GL L + + +L D+Q P V+ ++ + Sbjct: 3 VKVAIADDHVLFRKGLVTILELD-DNIEVVYGADNGKELIDKVDAQPPDVILMDL--KMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + K+I ++P +V +++++ L + +K D+++ I Sbjct: 60 VMDGMEATKIIKAKYPEVKVLVLSMYDE---EKFIIHCLELGANGYLLKNTDPDELVHAI 116 Query: 121 LKKETTITSFLN----------------------MPTLSLSRTESSMLRMWMAGQGTIQI 158 F N ++ L++ E +L + T ++ Sbjct: 117 GTVMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEM 176 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVT 199 ++++ I +TV H+ N+ K N + + V Sbjct: 177 AEKLFISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_C3AL44 Response regulator receiver n=3 Tax=Bacillus RepID=C3AL44_BACMY Length = 578 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 64/207 (30%), Gaps = 23/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D L L G ++ + C+ ++P+VV D + Sbjct: 374 IHILIVDDQPIISDSLEFLLDKYGF---RVSVANSGAQALKQCEERQPNVVL--MDIQMP 428 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + +K I N+ P+T I+ + +K ++++ I Sbjct: 429 KMNGITTMKKIKNRWPDTKIIMVTTFEETSS---VSEAIEAGAEGYVLKSVQPEELVAAI 485 Query: 121 LKKETTITSFLNM---------------PTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 T P L+ E +L G +I+ ++ + Sbjct: 486 RLVHLGGTMLSQDVATRLFKEYSPMPKKPPYELTPREMDVLGCLKEGLRYKEIAAKLFLS 545 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 TV ++ +I K++ + Sbjct: 546 EGTVRNYASSIYMKLQVSGRGEAVKKA 572 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 25/210 (11%), Positives = 57/210 (27%), Gaps = 24/210 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D R GL +L + + + + A P V+ D + Sbjct: 8 IRVLIADDHRMVRQGLRTFLELQEGIEVA-GEAADGAECAERAAELEPDVIL--LDLVMP 64 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++L+ +V + + ++ K + + Sbjct: 65 GVDGVGAMELLREAGSTARVLVVTSFTDR---RMIIPAIRAGARGYVYKDVDPAALAAAV 121 Query: 121 LKKETTITSFLNM------------------PTLSLSRTESSMLRMWMAGQGTIQISDQM 162 +L+ E +L + G+ +I+ + Sbjct: 122 RSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIARAL 181 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV +H NI K+ ++ Sbjct: 182 VLAEKTVKTHVSNILMKLGVADRTQAALWA 211 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 22/205 (10%) Query: 3 TIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDA 62 +I+D R GL L + G + + + Q + ++ + Sbjct: 15 ILIVDDHVIVREGLQRILEATG-AGWVVAEASSGFQALEVMRHQPIDLAIVDL--SMPGM 71 Query: 63 SNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILK 122 + IK I + P +V A ++Y + + K + +++ + K Sbjct: 72 NGLDLIKRIRTEFPRVRVLVLSMHAE---EQYAMRAFKAGANGYVTKDGASAELVNAVRK 128 Query: 123 KETTITSFLNMP----------------TLSLSRTESSMLRMWMAGQGTIQISDQMNIKA 166 T LS E +LR +AG+ I++ +++ Sbjct: 129 VATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSV 188 Query: 167 KTVSSHKGNIKRKIKTHNKQVIYHV 191 KTVS+HK I+ K++ + Sbjct: 189 KTVSTHKSRIQEKLQLPTMAALIRY 213 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 25/211 (11%), Positives = 69/211 (32%), Gaps = 25/211 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R G+ L + + + + P + D + Sbjct: 5 LKIVLADDHALVRAGIRTLLEKLPGVTI-VGEAGDGRETVTLVHTFAPDIAI--MDITMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I +HP T ++ ++Y+L + +K + ++ + Sbjct: 62 GLNGFDATARIAREHPRTKVLILSMHT---AEDYVLQALRAGATGYLLKDAATAELQLAL 118 Query: 121 LKKETTITSFLN-------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQ 161 T PT +L+ ++++ G+ T +I+ Sbjct: 119 NAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFL 178 Query: 162 MNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +N+ KT+ +H+ ++ ++ H+ + Sbjct: 179 LNLSVKTIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_Q7NN43 Two-component response regulator n=2 Tax=Gloeobacter violaceus RepID=Q7NN43_GLOVI Length = 217 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 24/210 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++++ R+GL L + + + + E + + RP +V D + Sbjct: 5 VRVLLVEDDPLFRMGLAMVLRHQPQIEL-VAEAEDGETALALANRHRPQLVL--LDIGLP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 Q + + +HP +V + + +L +K D +L I Sbjct: 62 GLDGRQTLVRLKQEHPEIRVLVLTSREEAGLVQAML---QAGADGYCLKGIGPDRLLTVI 118 Query: 121 LKKETT------------------ITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 + S +L+ E +L G +I Q+ Sbjct: 119 REVSAGNGWFDAKVLAQVRSAFAVAPSEPPANAAALTEREREVLGWIARGASNPEIGRQL 178 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 +I + TV H I RK+ ++ + Sbjct: 179 HISSGTVRVHVHAILRKLGATDRTQAAVLA 208 >UniRef50_C1F7G9 Two-component response regulator n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7G9_ACIC5 Length = 213 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 64/198 (32%), Gaps = 15/198 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I+D R GLT L ++ + + + ++ VV D + Sbjct: 9 IRVLIVDDHPVVRAGLTSMLSTKPQLH-MLPAASGGAEALTVLEEEQVDVVL--LDLKMP 65 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + + N+ I+ + DE + IK + ++IL I Sbjct: 66 GINGIEVLHRLNNRGALPRTIILSSYE---MDEDIYRAIQAGARGYLIKDTTQEEILEAI 122 Query: 121 LKKETTITSFLNMPTLS---------LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 L+R E+ +L M G +I I T + Sbjct: 123 AAVHAGSLHLPRHIAQRISERIGRQELTRRETEILEMLAKGLTNKEIGRVFGISENTARN 182 Query: 172 HKGNIKRKIKTHNKQVIY 189 H +I +K++ ++ Sbjct: 183 HVNSIIQKLEVSDRTEAA 200 >UniRef50_C1A730 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A730_GEMAT Length = 209 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R GL L + I + P VV + + Sbjct: 6 IRILLVDDHAILREGLAALLNG-VDGMQVIGQAGDGATAIDLYRNLLPDVVICDL--RMV 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 ++ I + P I+ DE + SS +K ++ + Sbjct: 63 PMDGTEVTSTIRAEFPAARVILLTTYDT---DEEVFRGLRAGASSYLLKDVEPAQLIDTV 119 Query: 121 LKKETTITSF---------LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSS 171 + ++ + +L+ + +LR G+ I+I++ + I TV + Sbjct: 120 HAVYAGRKAIDPSIAAKLAEHVASDALTARQLEVLRSLAEGRSNIEIANTLYISEGTVKA 179 Query: 172 HKGNIKRKIKTHNKQVIYHV 191 H I +K+ ++ + Sbjct: 180 HIKAILQKLGARDRTQAVTI 199 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 26/212 (12%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLA-IACDSQRPSVVFINEDCFI 59 ++ I++ + R GL L K + + D + +RP +V D + Sbjct: 2 ITFYIVEDHTIVRQGLKQLLAKYAEMKV-LAEFGVPDQIMDNLAKGERPDIVLC--DINL 58 Query: 60 HDASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGD 119 + I ++P+ I+ Y+L + K +++ Sbjct: 59 PGMDGLALTEKIKQKYPDQKIIILTMHQKEF---YVLKAFDAGADGYFHKDTEESELIMG 115 Query: 120 ILKKETTITSFLNMPTL-------------------SLSRTESSMLRMWMAGQGTIQISD 160 I K F + +L+ E +L +AG G +I D Sbjct: 116 IKKIYNGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGD 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ I +TV +H+ NI RK N + Sbjct: 176 KLCISTRTVENHRANILRKFGLKNTVELVKFA 207 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 33/224 (14%), Positives = 64/224 (28%), Gaps = 30/224 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R G L S + + + +R VV D + Sbjct: 21 LRVVLADDQDLVRAGFRVILSSD-DGIEVVGEAGDGWEAVEVATRERADVVL--MDVQMP 77 Query: 61 DASNSQRIKLII----NQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDI 116 + + ++ HP T I+ ++YL S +K S +D+ Sbjct: 78 KLDGLEATRRLLGPAGADHP-TKVIILTTFD---REDYLFEALRAGASGFLLKNASPEDL 133 Query: 117 LGDILKKETTITSF-------------------LNMPTLSLSRTESSMLRMWMAGQGTIQ 157 + + L+ E +L + G + Sbjct: 134 IESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAKGASNAE 193 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNG 201 I+ Q+ + TV +H I K+ ++ VT G Sbjct: 194 IARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVTPG 237 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 65/209 (31%), Gaps = 24/209 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 I++D S R G+ G L + + + T ++ + VVF D + Sbjct: 5 RIILVDDHSLFRSGMRGLLDRYDGIRV-VGEASTGEEFLAMLPATEADVVF--MDFAMPG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + ++ + + P I + + Y +K +D++L I Sbjct: 62 MNGAETTEKALALEPGLKVITLSMFGD---ENYYSRMVQAGAKGFLMKDSPMDEVLRAIE 118 Query: 122 KKETTITSFLNM------------------PTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 T F LS E +L G +I+D++ Sbjct: 119 TVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELF 178 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I +TV H+ NI K N + Sbjct: 179 ISKRTVDKHRANILEKTGCKNTASLVVYA 207 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 25/210 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +++D R G+ + + T A P + I D + Sbjct: 24 RVLLVDDHPAIRRGMAAIIDEEPDL-TTCGEASTAPMALEAMRRLNPDIAVI--DISMPG 80 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + IKL++ + P ++ Y L +K E+L+ +L + Sbjct: 81 TNGVELIKLMLAEQPGLQILMLSMHDESV---YALRALRAGAKGYVMKGEALECVLTGLR 137 Query: 122 KKETTITSFLN-------------------MPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 K P LS E +LR+ G G+ +I++++ Sbjct: 138 KVGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAEEL 197 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 ++ KTV +H+ +IK K+ + Sbjct: 198 SLSVKTVETHRAHIKEKLGFKEAGEMVRFA 227 >UniRef50_A4JJ97 Two component transcriptional regulator, LuxR family n=6 Tax=Proteobacteria RepID=A4JJ97_BURVG Length = 213 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 33/213 (15%), Positives = 56/213 (26%), Gaps = 25/213 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +I+D R G+ L G + DD D I D + Sbjct: 1 MKILIVDDHPILRDGVAALLRQNGE-DVTVAQAGNADDAMRMLDQ-SADFDAIVLDLKLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I + P IV + + K +L I Sbjct: 59 GMNGLDAISAFAGKCPQLQIIVLSTSED---AADVRAAFARGALGYVPKSAGPHTVLSAI 115 Query: 121 LKKETTITSFLNM--------------------PTLSLSRTESSMLRMWMAGQGTIQISD 160 + L++ + +LR G I+D Sbjct: 116 RMVLDGERYVPPLMLDDSSSAAPGSPRPAPATRSAGPLTQRQIEVLRYVAEGVPNKVIAD 175 Query: 161 QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR 193 ++N+ KTV +H I + + N+ R Sbjct: 176 RLNLSEKTVKAHVTAIFKALNVLNRTQAAAAAR 208 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 26/207 (12%), Positives = 66/207 (31%), Gaps = 21/207 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +++D + R G L + + + + + RP+VV I+ + Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDI-VVVAEAGDGGEALNQWRALRPAVVVIDL--GLP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + I + + + F + + L K + ++ + Sbjct: 60 GMGGLELIARLRQRDEACRMLAFSMHRDAVWVAQALRA---GALGYVTKSSAPSQLVAAV 116 Query: 121 LKKETTITSFL---------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIK 165 + + LS E ++R+ + G+ +I+ +++ Sbjct: 117 REVNQGRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLS 176 Query: 166 AKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV + IK K+ T + + + Sbjct: 177 VKTVHNVHYQIKSKLGTASDFELARMA 203 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 30/209 (14%), Positives = 62/209 (29%), Gaps = 25/209 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D GL L ++ + + + VV D + Sbjct: 5 KVLIVDDNPAVLDGLKIILELENF--EVVSLCTNAKEAIEFLEKKHADVVL--MDIRMPV 60 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + I + PN I+ ++Y+ + +K I+ IL Sbjct: 61 MDGIEGTFNIKTKFPNVKVIILTTFCE---EDYIKKSLSFGADGYILKSSDAKHIVNSIL 117 Query: 122 KKETTI------------------TSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + L T +L+ E + ++ G +I+ + Sbjct: 118 SVLDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIARMLF 177 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 I TV ++ +I +K+ N+ I Sbjct: 178 ISEGTVRNYITSILQKLNLKNRTQIAVYY 206 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 171 bits (433), Expect = 2e-41, Method: Composition-based stats. Identities = 38/208 (18%), Positives = 70/208 (33%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + +I D + R GL +L S + + + VV D + Sbjct: 2 VKVLIADDHAVVRGGLRQFLSSTEEFDI-VAEAANGQTALELVRTSGCDVVL--LDITLP 58 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + + +K I P+ ++F + DE+ L N S K IL + Sbjct: 59 DLNGLEVLKRIKRSKPDLPVLIFSMFSE---DEFALPALNAGASGYLNKDSPPAQILAAL 115 Query: 121 LKKETTITSFL----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 +P +LS E ++L + G +I +Q ++ Sbjct: 116 HTVVAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHL 175 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KT+S+++ I K+ + I V Sbjct: 176 SVKTISTYRARILEKLDLASNAEITRYV 203 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 29/209 (13%), Positives = 70/209 (33%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++D R GL L + + + + + P V D + Sbjct: 36 IRVFVLDDHEIVRNGLRQTLARHDDIEV-VGEAGLAAEALRRIPALHPHVAV--LDGRLP 92 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D S + + + P+ ++ + + DE L + +K +D++G I Sbjct: 93 DGSGIDVCREVRSALPDVACLILTSYDD---DEALFSAIMAGAAGYVLKEIRGNDLVGAI 149 Query: 121 LKKETTITSFL-----------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + + + +L++ E +L++ G QI ++ Sbjct: 150 RTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTRLG 209 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + KTV ++ +I K+ ++ + Sbjct: 210 LSEKTVKNYVSSILEKLGLASRTQAAVYL 238 >UniRef50_C0GHS5 Two component transcriptional regulator, LuxR family n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GHS5_9FIRM Length = 219 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 22/208 (10%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + I+D RLGL G + + + + ++ +P VV D + Sbjct: 4 IKIFIVDDHEVVRLGLQGLFARYEELEI-VGEAASGEEAVQVVPVIKPDVVL--LDVRLQ 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + +LI + P ++ + A E + S+ +K + +++ I Sbjct: 61 GIHGADTCRLITSAVPGIKVVMLSSFAEP---EEVQAAFTAGASAYVLKNITSGNVIKAI 117 Query: 121 LKKETTITS----------------FLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNI 164 + LS+ E +L + G+ +I ++ + Sbjct: 118 KAVMQGESFIDPEITEQVMSLIRGEKAASQISGLSKREEEILHLVGEGKTNKEIGRELFL 177 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 KTV +H I K+ N+ + Sbjct: 178 SEKTVRNHVSRILDKLGVSNRSQAAAFM 205 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 31/207 (14%), Positives = 68/207 (32%), Gaps = 24/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D S R G+ L S I + + + +P +V D + Sbjct: 4 MRVLLVDDHSLVRAGIRALLGS-IAGVAGIEEASSGRQAVELAATMQPDLVL--MDIAMD 60 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 D + I HP+ ++ F E L +K ++ ++ I Sbjct: 61 DMDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALR---CGARGYLLKDAAVAELEMAI 117 Query: 121 LKKETTITSFL------------------NMPTLSLSRTESSMLRMWMAGQGTIQISDQM 162 L+ ++ +L + +G GT +I+ ++ Sbjct: 118 AAVMRGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRL 177 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY 189 ++ KTV +H+ I ++ + + Sbjct: 178 DLSVKTVEAHRAQIMERLGVRDIANLL 204 >UniRef50_Q7NMF3 Two-component response regulator n=1 Tax=Gloeobacter violaceus RepID=Q7NMF3_GLOVI Length = 212 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 27/206 (13%), Positives = 65/206 (31%), Gaps = 24/206 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I++ + R+GL L + + + S +P +V ++ + Sbjct: 3 RILIVEDHALMRIGLRQVLSQTPEYEVA-GEAADGEQALALARSLQPDLVLMDL--GLPV 59 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPES--LDDILGD 119 S ++ +++ ++P + + DE + +K + +L Sbjct: 60 MSGTEVTRILKREYPAMRVLALTSHDE---DESVFGALAAGADGYCLKATAGIASRLLAA 116 Query: 120 ILKKETTITSFLNM----------------PTLSLSRTESSMLRMWMAGQGTIQISDQMN 163 + LS E +L++ G +I ++ Sbjct: 117 VASVRDGAAWLDPDIADRVLRDLGRIPQAGADNPLSEREMEVLKLIADGLTNAEIGRRLY 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIY 189 I + TV H NI K+ +++ Sbjct: 177 IASGTVRVHVSNIIAKLGVNDRVQAA 202 >UniRef50_A1WN26 Two component transcriptional regulator, LuxR family n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WN26_VEREI Length = 222 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 15/210 (7%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + T+I+D + R G YL + + + + ++ P VV D + Sbjct: 6 IRTLIVDDHAVVRSGYRSYLEQVPGFQV-VAEADCANEAYAQYKRMHPDVVI--MDIMLQ 62 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 AS + I++ HP ++F + + L L K P++L + + Sbjct: 63 GASGIDASRRILSNHPGAKILIFSMYVSPVLLQQALNVGVLGAVGKQCDPDTLREAAIAV 122 Query: 121 LKKETTITSFLNMPT------------LSLSRTESSMLRMWMAGQGTIQISDQMNIKAKT 168 + + + + +LS E + + ++G +I+ +N+ AKT Sbjct: 123 AGGDRYLDASMAQSLVFSRYDRGQKIFDALSPREFEIFLLLISGAPVKEIAQALNLSAKT 182 Query: 169 VSSHKGNIKRKIKTHNKQVIYHVVRLTDNV 198 V++ I++K+ + + + D V Sbjct: 183 VANRASMIRQKLGVSSDIQLVKLAVAADIV 212 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 74/209 (35%), Gaps = 23/209 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D R L L + + + D+L Q + + D + Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRI-VGEASNGDELIDLISHQPVDIACV--DIGMP 59 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + ++ P+ I A ++ F LL N + K E+ +++L I Sbjct: 60 GMNGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLL---NAGATGYVTKAEAGEELLRAI 116 Query: 121 LKKETTITSFLNMPTL-----------------SLSRTESSMLRMWMAGQGTIQISDQMN 163 + + T ++ E +L++ G + +I+D+++ Sbjct: 117 HTVQQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLH 176 Query: 164 IKAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 + TV H+ NI RK+ H+ + Sbjct: 177 LAPSTVEVHRRNIMRKLDLHSVAELTKYA 205 >UniRef50_A3WDJ9 Two-component response regulator n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WDJ9_9SPHN Length = 217 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 24/208 (11%), Positives = 61/208 (29%), Gaps = 23/208 (11%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 +I+D R GL L G + T ++ S P V+ ++ Sbjct: 5 RILIVDDHQLAREGLRAVLA--GDGMEVVGLASTGEEAVELAGSLVPDVILMDVRLG-DG 61 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDIL 121 + + ++ ++ Y+ + +K + D+ I Sbjct: 62 IDGLEATRQVVALGLPIKVVMLTLHEMP---GYVREALAAGAAGYVLKDTEIGDLRAAIN 118 Query: 122 KKETTITSFLNMPTLS-----------------LSRTESSMLRMWMAGQGTIQISDQMNI 164 + ++ + L+ E ++ + G +I+ +++I Sbjct: 119 QVMAGQSALPLDLVSAAMRAENRPEPKGDLSQILTSREQEVVELVAEGLTNKEIARKLDI 178 Query: 165 KAKTVSSHKGNIKRKIKTHNKQVIYHVV 192 TV H + K+ ++ + Sbjct: 179 SPATVKVHVERLIGKLGVADRTQAAVMA 206 >UniRef50_C7R398 Two component transcriptional regulator, LuxR family n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R398_JONDD Length = 230 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 64/211 (30%), Gaps = 29/211 (13%) Query: 2 STIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHD 61 II+D + R GL L + + ++ + +P VV D + Sbjct: 10 RIIIVDDDALVRAGLRMILGGDPGITV-VAEGTHGEEAVSLYAAHQPDVVL--MDIRMPV 66 Query: 62 ASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI- 120 K I+ + P+ +V DE+++ +K S D++ + Sbjct: 67 RDGLSATKDIVTRWPHANVLVLTTFDT---DEFIVKALRAGARGFLLKDTSPPDLVRAVN 123 Query: 121 ----------------------LKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQI 158 + +T L+ E + + G+ +I Sbjct: 124 LAGDGHPTLSPSVTAQLIAKVSEEPDTGRQRQARRMVEQLTERELDVAQQIAQGKSNQEI 183 Query: 159 SDQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 S + + TV +H I K N+ I Sbjct: 184 SQTLYMSIPTVKTHISRIFTKFDVDNRVQIA 214 >UniRef50_Q0A822 Two component transcriptional regulator, LuxR family n=2 Tax=Ectothiorhodospiraceae RepID=Q0A822_ALHEH Length = 221 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 34/215 (15%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 M +++D + R+ L L G ++ T + A P VV D + Sbjct: 1 MRLLLVDDHTLLRVALGDMLSQHGY---QVEHAGTEIEALSALAKSPPDVVL--LDLRMP 55 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + +K I ++ ++ + + LL + +K +++ + Sbjct: 56 GSGGLEVLKRIRSRDSELPVVMLTSSDE---ERDLLQALQAGANGYLVKDAEPAELIQGL 112 Query: 121 LKKETTITS--------------------------FLNMPTLSLSRTESSMLRMWMAGQG 154 K T+ P +L+ E +L + Sbjct: 113 EKVLAGQTAVASRLTDTLVQMMAGGRSQREGAEASRPPDPFAALTPREREILMHVARAES 172 Query: 155 TIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIY 189 I+ ++ + TV H +I RK+ ++ Sbjct: 173 NKVIARELGVSDGTVKLHIKSILRKLGVKSRVEAA 207 >UniRef50_Q4ZV39 Regulatory protein, LuxR:Response regulator receiver n=8 Tax=Pseudomonas RepID=Q4ZV39_PSEU2 Length = 222 Score = 170 bits (432), Expect = 3e-41, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 61/207 (29%), Gaps = 24/207 (11%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D TR G L + + C +P + D + Sbjct: 5 VRLVLADDHEVTRTGFVSLLAGHPEFEV-VGQAADGQQAIDLCQELQPDIAI--LDIRMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + +++ + P ++F + E + +K S D+++ + Sbjct: 62 VLNGLGAARILQQRMPGLKVVIFTMDDSTDHLE---AAMSAGAVGYLLKDASRDEVIDGL 118 Query: 121 LKKETTITSFLNMPTLSL------------------SRTESSMLRMWMAGQGTIQISDQM 162 + + + + L + E +L + G +I +++ Sbjct: 119 QRVARGEEALNSAVSARLLRRMTERNTSGAALPETLTPRERQVLGLVAGGFSNREIGEKL 178 Query: 163 NIKAKTVSSHKGNIKRKIKTHNKQVIY 189 I T +H + K+ ++ Sbjct: 179 GITTGTAKAHVEKVIGKLGASDRTQAA 205 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 170 bits (431), Expect = 3e-41, Method: Composition-based stats. Identities = 29/211 (13%), Positives = 80/211 (37%), Gaps = 29/211 (13%) Query: 1 MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIH 60 + ++ D + R G+ L + + + + D + +P ++ + D + Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANIEV-VGEAIDGADALEVVTATKPDLLIV--DIRMP 61 Query: 61 DASNSQRIKLIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDI 120 + + + ++ + +++ N I+ + +EY+L +K S ++ L + Sbjct: 62 NLTGIEVVEKLRSENNNVKIIMLSMHES---EEYVLKSIKAGADGYLLKGSSKEEFLKAL 118 Query: 121 LKKETTITSFLNMPTLSL-----------------------SRTESSMLRMWMAGQGTIQ 157 + F + L ++ E +L + ++G+G + Sbjct: 119 HAVSSGGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKE 178 Query: 158 ISDQMNIKAKTVSSHKGNIKRKIKTHNKQVI 188 I++ + I +T H+ N+ +K+K N + Sbjct: 179 IAEALEISKRTAEVHRFNLMKKLKVKNLMEL 209 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.171 0.514 Lambda K H 0.267 0.0525 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,201,719,900 Number of Sequences: 3077464 Number of extensions: 51243740 Number of successful extensions: 254693 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 13094 Number of HSP's successfully gapped in prelim test: 11699 Number of HSP's that attempted gapping in prelim test: 204412 Number of HSP's gapped (non-prelim): 28543 length of query: 207 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 84 effective length of database: 661,868,284 effective search space: 55596935856 effective search space used: 55596935856 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 91 (39.3 bits)