Phyre 2 alignment of P0A8I8 with c3ic6A

Job Description P0A8I8
Confidence 38.49% Date Thu Jan 5 11:07:57 GMT 2012

Rank 32 Aligned Residues 63

% Identity 21% Template c3ic6A_

PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative methylase family protein; PDBTitle: crystal structure of putative methylase family protein from neisseria2 gonorrhoeae

Resolution 2.59 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																											.																						.	.	.	.	.
Query SS confidence																											.																						.	.	.	.	.
Query Sequence	W	D	T	P	Q	L	A	A	E	L	E	R	W	K	L	D	G	R	D	V	S	L	L	I	G	G	.	P	E	G	L	S	P	A	C	K	A	A	A	E	Q	S	W	S	L	S	A	L	.	.	.	.	.	T	L	P	H	P	L	V	R	V	L	V	A	E	S	L	Y	R
Query Conservation																											.																						.	.	.	.	.
Alig confidence																											.																			.			.	.	.	.	.
Template Conservation																																														.
Template Sequence	Q	T	P	R	D	L	V	P	E	L	L	Q	A	A	N	R	G	E	K	V	A	L	V	F	G	N	E	T	F	G	L	S	I	E	E	V	R	A	C	N	R	L	X	T	I	.	N	G	N	P	D	Y	F	S	L	N	L	A	Q	A	V	Q	V	V	C	Y	E	I	F	S
Template Known Secondary structure	B															T	T									B	T	T	T	B								T		S						.				T	T
Template Predicted Secondary structure																																														.
Template SS confidence
	121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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