481 c3sqsA_ Probab=88.90   E-value=1.8  Score=22.89  Aligned_columns=139  Identities=13%

Q ss_pred             CCCCCEEEEEE-CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC-------CHHHHHHHH
Q ss_conf             29952798985-4899989999999999965998999768878876645257899989987199-------989999999
Q batch____        14 RKEGAFVPFVT-LGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGV-------TPAQCFEML   85 (268)
Q Consensus        14 ~~~~~li~yl~-~g~p~~~~~~~~~~~~~~~G~D~iEiGiPfsdP~aDGp~I~~a~~~al~~g~-------~~~~~~~~v   85 (268)
                      ..+.....|.+ .+..+.+...+.++.+.+.|...+-+-+                      |.       ++..-++.+
T Consensus       137 ~~~~~~~~y~~~~~~~~~e~~~~~~~~~~~~Gf~~~KiKv----------------------G~~~~~~~~~~~~d~~~i  194 (386)
T c3sqsA_         137 RTKEKIPVYYSKLYADSIPAMQAEAEEAQKHGYQGYKTRF----------------------GYGPKDGPAGMRENLKRV  194 (386)
T ss_dssp             CCSSSEEEEEECCCBCCHHHHHHHHHHHHTTTCSEEEEEC----------------------CCCGGGHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEC----------------------CCCCCCCCCCHHHHHHHH
T ss_conf             7767421545425778989999999999865987999803----------------------567865436989999999


Q ss_pred             HHHHHHCCCCCEEEECCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
Q ss_conf             99986268986999656113420899999999986599799705689466699999999759957986489983899999
Q batch____        86 ALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQ  165 (268)
Q Consensus        86 ~~ir~~~~~~Piilm~y~n~~~~~g~e~f~~~a~~aG~dgviv~dlp~~e~~~~~~~~~~~Gl~~i~~vsp~t~~~~i~~  165 (268)
                      +++|+..+.- +-+|...|--                        ...+++.++.+.+..+++..+-             
T Consensus       195 ~air~~~g~~-~~l~vDaN~~------------------------~~~~~A~~~~~~L~~~~i~~iE-------------  236 (386)
T c3sqsA_         195 EALREVLGYD-VDLMLECYMG------------------------WNLDYTKRMLPKLERFEPRWLE-------------  236 (386)
T ss_dssp             HHHHHHHCSS-SEEEEECTTC------------------------SCHHHHHHHHHHHGGGCCSEEE-------------
T ss_pred             HHHHHHCCCC-CEEEEECCCC------------------------CCHHHHHHHHHHHHHCCCEEEE-------------
T ss_conf             9999975999-7899955888------------------------8999999999985445626996-------------


Q ss_pred             HHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCC-CCEEEE
Q ss_conf             98416974899740686786656642489999999851289679961889989999999719-999999
Q batch____       166 IASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAG-AAGAIS  233 (268)
Q Consensus       166 ~~~~a~g~iy~~~~~g~tg~~~~~~~~~~~~i~~vr~~~~~Pv~vggGI~s~e~a~~~~~~G-ADgVvV  233 (268)
                                           .++++.-.+.++++++.+++||+.+=.+.++++..++++.+ +|.+.+
T Consensus       237 ---------------------eP~~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~i~~~~~d~i~~  284 (386)
T c3sqsA_         237 ---------------------EPVIADDVAGYAELNAMGIVPISGGEHEFSVMGCAELINRKAVSVLQY  284 (386)
T ss_dssp             ---------------------CCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred             ---------------------CCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCEEEE
T ss_conf             ---------------------357806989999999862990980876488999999997389969950