325 c3fluD_ Probab=96.60   E-value=0.06  Score=31.94  Aligned_columns=188  Identities=20%

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHCC-CCCE
Q ss_conf             8999899999999999659989997688788766452578999899871999-------8999999999986268-9869
Q batch____        26 GDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVT-------PAQCFEMLALIRQKHP-TIPI   97 (268)
Q Consensus        26 g~p~~~~~~~~~~~~~~~G~D~iEiGiPfsdP~aDGp~I~~a~~~al~~g~~-------~~~~~~~v~~ir~~~~-~~Pi   97 (268)
                      |.-|.+.+.+.++.+.+.|+|.+-++                       |.+       .++-.+.++.+++... ++|+
T Consensus        19 g~iD~~~~~~~~~~l~~~Gv~gi~~~-----------------------G~tGE~~~Ls~~Er~~i~~~~~~~~~~~~~v   75 (293)
T c3fluD_          19 GSIHYEQLRDLIDWHIENGTDGIVAV-----------------------GTTGESATLSVEEHTAVIEAVVKHVAKRVPV   75 (293)
T ss_dssp             SCBCHHHHHHHHHHHHHTTCCEEEES-----------------------STTTTGGGSCHHHHHHHHHHHHHHHTTSSCE
T ss_pred             CCCCHHHHHHHHHHHHHCCCCEEEEC-----------------------CCCCCHHHCCHHHHHHHHHHHHHHCCCCCEE
T ss_conf             88488999999999997799899987-----------------------7235702179999999999999960899739


Q ss_pred             EEECCCHHHHCCCHHHHHHHHHHCCCCEEEE--CC---CCHHHHHHHHHHHHHC-CCCEEEEECCC-----CCHHHHHHH
Q ss_conf             9965611342089999999998659979970--56---8946669999999975-99579864899-----838999999
Q batch____        98 GLLMYANLVFNKGIDEFYAQCEKVGVDSVLV--AD---VPVEESAPFRQAALRH-NVAPIFICPPN-----ADDDLLRQI  166 (268)
Q Consensus        98 ilm~y~n~~~~~g~e~f~~~a~~aG~dgviv--~d---lp~~e~~~~~~~~~~~-Gl~~i~~vsp~-----t~~~~i~~~  166 (268)
                      +.=...+....  .=++++.|.++|+|++++  |.   ...++..++...+.+. ++..+..-.|.     .+.+.+.++
T Consensus        76 i~gv~~~~~~~--~i~~a~~a~~~Gad~v~~~pP~~~~~s~~~i~~~~~~ia~~~~~pi~~Yn~P~~tg~~~s~~~~~~L  153 (293)
T c3fluD_          76 IAGTGANNTVE--AIALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRL  153 (293)
T ss_dssp             EEECCCSSHHH--HHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred             EEECCCCCHHH--HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             99658899999--9999999985499899993887889998899999999997549989999675333677598999998


Q ss_pred             HHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCC
Q ss_conf             84169748997406867866566424899999998512896799618899899999997199999990489987541546
Q batch____       167 ASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHIN  246 (268)
Q Consensus       167 ~~~a~g~iy~~~~~g~tg~~~~~~~~~~~~i~~vr~~~~~Pv~vggGI~s~e~a~~~~~~GADgVvVGSai~r~~~~~~~  246 (268)
                      .+ -..+++.--..+-           ...+.++.+...-.+.+-.|  +.+.+...+..|++|.+.|++-+        
T Consensus       154 ~~-~~~v~giK~s~~d-----------~~~~~~l~~~~~~~~~v~~G--~d~~~~~~l~~G~~G~~~~~~n~--------  211 (293)
T c3fluD_         154 AE-IPNIVGVKEASGN-----------IGSNIELINRAPEGFVVLSG--DDHTALPFMLCGGHGVITVAANA--------  211 (293)
T ss_dssp             TT-STTEEEEEECSCC-----------HHHHHHHHHHSCTTCEEEEC--CGGGHHHHHHTTCCEEEESGGGT--------
T ss_pred             HC-CCCEEEEECCCCC-----------HHHHHHHHHHCCCCEEEEEC--CHHHHHHHHHHCCCCHHHHHHHH--------
T ss_conf             34-7988899638899-----------89999999863998799948--77999999983774128989988--------


Q ss_pred             CHHHHHHHHHHHHH
Q ss_conf             88999999999999
Q batch____       247 EPEKMLAALKVFVQ  260 (268)
Q Consensus       247 ~~~~~~~~l~~~~~  260 (268)
                      -|+...+..+.+.+
T Consensus       212 ~P~~~~~~~~a~~~  225 (293)
T c3fluD_         212 APKLFADMCRAALQ  225 (293)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHC
T ss_conf             69999999999986