23 c3sm9A_ Probab=100.00  E-value=0  Score=284.33  Aligned_columns=337  Identities=19%

Q ss_pred             CCCEEEEEEECCCCC---------CHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf             875799999367688---------55887999999999999998708899-72699999418888899999999973259
Q batch____        23 AEDIKVAVVGAMSGP---------VAQYGDQEFTGAEQAVADINAKGGIK-GNKLQIVKYDDACDPKQAVAVANKVVNDG   92 (367)
Q Consensus        23 ~~~i~IG~~~p~sG~---------~a~~g~~~~~g~~~a~~~iN~~ggi~-G~~i~l~~~D~~~~~~~a~~~~~~l~~~~   92 (367)
                      ...|+||.|+|++++         .+..|.....++++|+++||++++|+ |++|+++++|++++|..+++.+.+++.++
T Consensus         7 ~gdi~Ig~l~pl~~~~~~~~~~~~~~~~g~~~~~A~~~Ai~~iN~~~~iL~~~~l~~~~~Dt~~~~~~a~~~~~~li~~~   86 (437)
T c3sm9A_           7 EGDLVLGGLFPINEKGTTEECGRINEDRGIQRLEAMLFAIDEINKDDYLLPGVKLGVHILDTCSRDTYALEQSLEFVRAS   86 (437)
T ss_dssp             CCSEEEEEEECCEEECCCCSEEEECTTTTHHHHHHHHHHHHHHHHCSSSSTTCCEEEEEEECTTCHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCC
T ss_conf             68789999984036888665444443001678999999999986088868870899999858999789999999998449


Q ss_pred             --CCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf             --9699908985899999999987498420335663101466-8870798337817899999999986138838999806
Q batch____        93 --IKYVIGHLCSSSTQPASDIYEDEGILMITPAATAPELTAR-GYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHD  169 (367)
Q Consensus        93 --v~~vig~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~v~ii~~  169 (367)
                        +++||||.+|..+.++.+++..+++|+|+++++++.+..+ .++++|++.|++.....++.. +.++++|+++++++.
T Consensus        87 ~~~vaiiGp~~S~~~~a~~~~~~~~~ip~is~~~~~~~ls~~~~~~~f~r~~p~~~~~~~a~~~-~~~~~~w~~v~vv~~  165 (437)
T c3sm9A_          87 LLIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAE-ILRFFNWTYVSTVAS  165 (437)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEESSCCTHHHHHHHHH-HHHHTTCCEEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEEEECCHHHHHHHHHH-HHHHCCCCEEEEEEE
T ss_conf             9449998289878899999999860896213424633323777713899852001356899999-999639988999831


Q ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHC-CCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             9667758999999998752988999996053100058999999817-996899974677999999999986998756874
Q batch____       170 KQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKE-NIDFVYYGGYHPEMGQILRQARAAGLKTQFMGP  248 (367)
Q Consensus       170 ~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~-~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~  248 (367)
                      ++.+++.....+.+.+.+.+++|+..+.++....+++..++.++.. .+++|++++...+...+++++++.|++..++..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~iii~~~~~~~~~~l~~~a~~~g~~~~~i~~  245 (437)
T c3sm9A_         166 EGDYGETGIEAFEQEARLRNISIATAEKVGRIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVAS  245 (437)
T ss_dssp             SSHHHHHHHHHHHHHHHTTTCEEEEEEEECCCHHHHHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             42257889999999987508468999970887655799999874137773699972888999999999864997489980


Q ss_pred             C-CCCCHHHHHHHHHHHCCCEEEECC--------------CCCCCHHHHHHHHHHHHHH--------------------C
Q ss_conf             0-577788854115763671465215--------------7889977999999999982--------------------8
Q batch____       249 E-GVANVSLSNIAGESAEGLLVTKPK--------------NYDQVPANKPIVDAIKAKK--------------------Q  293 (367)
Q Consensus       249 ~-~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~f~~~~~~~~--------------------g  293 (367)
                      . +.....+....+....+.....+.              .+...+....+.+.+++.|                    +
T Consensus       246 ~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (437)
T c3sm9A_         246 DGWGAQESIIKGSEHVAYGAITLELASQPVRQFDRYFQSLNPYNNHRNPWFRDFWEQKFQCSLQNHRRVCDKHLAIDSSN  325 (437)
T ss_dssp             TTTTTCHHHHTTCTTTTTTCEEEEECCCCCHHHHHHHHTCCTTTCTTCTTHHHHHHHHHTCBCCCCSCBCCTTCCCCTTT
T ss_pred             CCCCCCHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             34456478874225443343650236544023766764102467778878999999871755555455554223345568


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHC------------------CCHHHHHHHHHCCCCCCCEEE--EEECCCCCCCCCCEE
Q ss_conf             899776899999999999998718------------------998999999960985323057--898879884778379
Q batch____       294 DPSGAFVWTTYAALQSLQAGLNQS------------------DDPAEIAKYLKANSVDTVMGP--LTWDEKGDLKGFEFG  353 (367)
Q Consensus       294 ~~p~~~a~~~yda~~~~~~Ai~~~------------------~~~~~i~~~l~~~~~~g~~G~--i~f~~~g~~~~~~~~  353 (367)
                      ..|+.++.++||+++++++|++++                  .++..+.+.|++++|+|++|+  ++||++||+. ..|.
T Consensus       326 ~~~~~~a~~~yDav~~~a~Al~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~f~G~tG~~~v~fd~~Gd~~-~~~~  404 (437)
T c3sm9A_         326 YEQESKIMFVVNAVYAMAHALHKMQRTLCPNTTKLCDAMKILDGKKLYKDYLLKINFTAPFNDSIVKFDTFGDGM-GRYN  404 (437)
T ss_dssp             CCCCTTHHHHHHHHHHHHHHHHHHHHHHSTTCSSCCHHHHSCCHHHHHHHTGGGCCEECTTCCCEECCCTTCBCC-CCEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEECCCCCEEEEECCCCCCC-CCEE
T ss_conf             762157999999999999999998631577654333455678728999999750343225773189985899837-6357


Q ss_pred             EEEEECCE
Q ss_conf             99998890
Q batch____       354 VFDWHANG  361 (367)
Q Consensus       354 i~q~~~~g  361 (367)
                      |++|+..+
T Consensus       405 I~~~~~~~  412 (437)
T c3sm9A_         405 VFNFQNVG  412 (437)
T ss_dssp             EEEEEESS
T ss_pred             EEEEEEEC
T ss_conf             99999629