96 c1mkyA_ Probab=98.12   E-value=0.00011  Score=45.89  Aligned_columns=201  Identities=17%

Q ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             99987999888899999946775872269988997558860001578852707971440008788799998611333203
Q batch____        39 RALLGKNGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEGLTVAENLCLGQWPRRN  118 (503)
Q Consensus        39 ~~lvG~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~v~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~i~~~~~~~~~  118 (503)
                      ++|+|+.++|||||+|.|+|  ...++....++..                                             
T Consensus         3 VaivG~pNvGKStL~N~ltr--~~~~~~~~~~g~~---------------------------------------------   35 (407)
T c1mkyA_           3 VLIVGRPNVGKSTLFNKLVK--DPVQDTVEWYGKT---------------------------------------------   35 (407)
T ss_dssp             EEEECCTTSSHHHHHHHHHC--CCSEEEEEETTEE---------------------------------------------
T ss_pred             EEEECCCCCCHHHHHHHHHC--CCEEEEEEECCEE---------------------------------------------
T ss_conf             99977998888899999849--9639999759989---------------------------------------------


Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             58898899999999999768940017755879999999999999986298488866510178999999999999999973
Q batch____       119 GMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEIARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSAL  198 (503)
Q Consensus       119 ~~~~~~~~~~~~~~~l~~lgl~~~~~~~~~~LSgGe~~rv~ia~al~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~  198 (503)
                                     +..++-....+.....+.....+.+.  .++..---++++=+...++.    ..-..+++.+++.
T Consensus        36 ---------------~~lvDTpG~~~~~~~~~~~~~~~~~~--~~i~~aDlil~VvD~~~~~~----~~d~~i~~~Lr~~   94 (407)
T c1mkyA_          36 ---------------FKLVDTCGVFDNPQDIISQKXKEVTL--NXIREADLVLFVVDGKRGIT----KEDESLADFLRKS   94 (407)
T ss_dssp             ---------------EEEEECTTTTSSGGGCCCHHHHHHHH--HHHTTCSEEEEEEETTTCCC----HHHHHHHHHHHHH
T ss_pred             ---------------EEEEECCCCCCCCHHHHHHHHHHHHH--HHHHHCCEEEEEECCCCCCC----HHHHHHHHHHHHH
T ss_conf             ---------------99995567310787799899999999--99986798999971898789----8799999999861


Q ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             46300200000011111342554024414642028884221101112222222222222222222221123454210233
Q batch____       199 GVAVIYVSHRMEEIRRIASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKPKL  278 (503)
Q Consensus       199 g~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  278 (503)
                      +..++++-...+                   ....+......-...+...+...+............-.....+......
T Consensus        95 ~k~~ilv~NK~D-------------------~~~~~~~~~~~ef~~lg~~~~~~ISA~~g~g~~~l~~~i~~~~~~~~~~  155 (407)
T c1mkyA_          95 TVDTILVANKAE-------------------NLREFEREVKPELYSLGFGEPIPVSAEHNINLDTXLETIIKKLEEKGLD  155 (407)
T ss_dssp             TCCEEEEEESCC-------------------SHHHHHHHTHHHHGGGSSCSCEECBTTTTBSHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCC-------------------CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             254300110001-------------------6672246889999836998289986245762332100111111111111


Q ss_pred             CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC------CCCCEEEECCEEC
Q ss_conf             29524441021000122222114677765553201------5875699888888
Q batch____       279 EDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLEE------YEQGEIVINGEKI  326 (503)
Q Consensus       279 ~~vs~~v~~Ge~~~i~G~nGsGKSTLl~~l~G~~~------~~~G~i~~~g~~~  326 (503)
                      .........--.++++|..++|||||++.|+|...      +......++|..+
T Consensus       156 ~~~~~~~~~~~~iaiiG~~n~GKSSLin~l~~~~~~~vs~~~~~~~~~~~~~~~  209 (407)
T c1mkyA_         156 LESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIPVDDEVFIDGRKY  209 (407)
T ss_dssp             SSSCCCCCSCEEEEEECSTTSSHHHHHHHHHTSTTEEECCCCCCEEEEETTEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEE
T ss_conf             221223443210002376666526588874088426862044322011298589