14 c1rnlA_ Probab=99.93   E-value=1.1e-25  Score=168.33  Aligned_columns=194  Identities=22%

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCC--CEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEC
Q ss_conf             969998699899999999999889--899999898999999983799737402567655787200245532013541010
Q batch____         1 MRVLVVEDNALLRHHLKVQIQDAG--HQVDDAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVL   78 (223)
Q Consensus         1 mkILivdDd~~~~~~l~~~L~~~g--~~V~~a~~~~eal~~~~~~~~dliilDi~mp~~~G~~~~~~ir~~~~~~~ii~l   78 (223)
                      +|||||||||.++.+++..|+..+  ..|.+|.|+.+|++.+.+..||++++|+.||+++|.+.++.++...+..+++++
T Consensus         3 i~Ilivdd~~~~~~~l~~~L~~~~~~~~v~~a~~~~eal~~~~~~~pdiilld~~l~~~~g~~~~~~~~~~~~~~~~~~~   82 (200)
T c1rnlA_           3 ATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVF   82 (200)
T ss_dssp             EEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHCCSEEEEETTCGGGCHHHHHHHHTTSCCCSEEEEE
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             08999749989999999999848981799997898999999987199755421111100013689997420310012344


Q ss_pred             CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             46664899975321034433213300013046664300123322222222222222222222222221111100011100
Q batch____        79 TARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIM  158 (223)
Q Consensus        79 t~~~~~~~~~~~~~~ga~~yl~Kp~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~ll  158 (223)
                      ++.............++.++..++.....+.................              ..........++.+|..++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~lt~re~~vl  148 (200)
T c1rnlA_          83 SVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAGEMVLSEA--------------LTPVLAASLQLTPRERDIL  148 (200)
T ss_dssp             CSCSCHHHHHHHHHTTCSEEECTTSCHHHHHHHHHHHHHSCCCCCTT--------------THHHHHHHCCCCHHHHHHH
T ss_pred             CCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCCCC
T ss_conf             45310111000011222222100122222222222222222222222--------------2211111111222111112


Q ss_pred             CCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCCC
Q ss_conf             12333333210189999974366778872399999999999724688254066526972
Q batch____       159 ETLIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQG  217 (223)
Q Consensus       159 ~~l~~~~~~~~s~~~i~~~vw~~~~~~~~~tv~~~i~rlr~KL~~~~~~~~I~tvrg~G  217 (223)
                      ..+..+    .|..+|++.+     +++++||++|+++|++||++.+..+++......|
T Consensus       149 ~~~~~g----~s~keIA~~L-----~iS~~TV~~h~~~i~~KL~v~nr~el~~~a~~~g  198 (200)
T c1rnlA_         149 KLIAQG----LPNKMIARRL-----DITESTVKVHVKHMLKKMKLKSRVEAAVWVHQER  198 (200)
T ss_dssp             HHHHTT----CCHHHHHHHH-----TCCHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHT
T ss_pred             CCCCCC----CCHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
T ss_conf             224567----7689989886-----8870699999999999817998899999999817