 |
| Job Description | P0ADZ0 | | Confidence | 8.36% | Date | Thu Jan 5 11:22:07 GMT 2012 |
| Rank | 87 | Aligned Residues | 48 |
| % Identity | 17% | Template | d1fxla2 |
| SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
| Resolution | 1.80 |
|
|   |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
| Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
M | E | K | S | N | T | I | V | L | K | V | A | K | D | A | T | K | A | E | I | K | A | A | V | Q | K | L | F | E | V | E | V | E | V | V | N | T | L | V | V | K | G | K | V | K | R | H | G |
| Query Conservation |   |
  |
|   |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |
|
|
|   |   |
|
|
|   |   |   |   |
|
|   |
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
| Template Sequence |   |
I | R | D | A | N | L | Y | V | S | G | L | P | K | T | M | T | Q | K | E | L | E | Q | L | F | S | Q | Y | G | R | I | I | T | S | R | I | L | V | D | Q | V | T | G | V | S | R | G | V | G |
| Template Known Secondary structure |   |
G | T | T |
|  |  |  |  |  | S |
|
| T | T |
|
|  |  |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
122 | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|